RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CALCR (Homo sapiens)

Ensembl gene IDs: ENSG00000004948

Ensembl transcript IDs: ENST00000394441.5, ENST00000415529.2, ENST00000423724.5, ENST00000426151.7, ENST00000649521.1

Found 428 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GTTGTTGGCTGGTTCATTCCTCAGCTCCTGATGGCAGATGTAAATTaGGATGTCGCCAGCCTCCGCAGCAGCGGCTGCAGCGCGAGCAGA +
Preference number: 1 (lower is better)
Translates to: VVGWFIPQLLMADVN*DVASLRSSGCSASR
Trigger: TCTGCTCGCGCTGCAGCCGCTGCTGCGGAGGCTGGCGACATCCCAATTTACATCTGCCATCAGGAGCTGAGGAATGAACCAGCCAACAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
3UTR CCA 90 bp CTCAGCCAGCAGTTGTCATTGAAGTACACGGCCCTGGTAATAGCATaGATAGTGGTTGGCACCAGCGGGAACCGGATGAGAAGGCCAGGG +
Preference number: 1 (lower is better)
Translates to: LSQQLSLKYTALVIA*IVVGTSGNRMRRPG
Trigger: CCCTGGCCTTCTCATCCGGTTCCCGCTGGTGCCAACCACTATCCATGCTATTACCAGGGCCGTGTACTTCAATGACAACTGCTGGCTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
3UTR CCA 90 bp ATGGTGGCCTTCACAGCCTTCAGGTACATGTGGGATTCCGCCTCATaGGTTTCCCTCATTTTGGTCACAAGCACCCGGACAATGTTGAGC +
Preference number: 1 (lower is better)
Translates to: MVAFTAFRYMWDSAS*VSLILVTSTRTMLS
Trigger: GCTCAACATTGTCCGGGTGCTTGTGACCAAAATGAGGGAAACCCATGAGGCGGAATCCCACATGTACCTGAAGGCTGTGAAGGCCACCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
3UTR CCA 90 bp TCAGAGAGTGCATCACGTAATCATATATCTTCCCAAGCATCTTGTTaGAAGGTCTCCAGGGAAAGACGACAAACTGGATTCCCAGCAGGG +
Preference number: 1 (lower is better)
Translates to: SESASRNHISSQASC*KVSRERRQTGFPAG
Trigger: CCCTGCTGGGAATCCAGTTTGTCGTCTTTCCCTGGAGACCTTCCAACAAGATGCTTGGGAAGATATATGATTACGTGATGCACTCTCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
3UTR CCA 90 bp TTTGCATCTCAGTCCTGGATGAATGATGGAGTTCACAAGTTGCAGTaGGAGACTCCATTCCTAGACTGTCTCCCAAAGCAACAGTACCAA +
Preference number: 1 (lower is better)
Translates to: FASQSWMNDGVHKLQ*ETPFLDCLPKQQYQ
Trigger: TTGGTACTGTTGCTTTGGGAGACAGTCTAGGAATGGAGTCTCCCACTGCAACTTGTGAACTCCATCATTCATCCAGGACTGAGATGCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
3UTR TCA 90 bp CTTTGCTTGCATTACTGTGACATTTGCATCTCAGTCCTGGATGAATaGTGGAGTTCACAAGTTGCAGTGGGAGACTCCATTCCTAGACTG +
Preference number: 1 (lower is better)
Translates to: LCLHYCDICISVLDE*WSSQVAVGDSIPRL
Trigger: CAGTCTAGGAATGGAGTCTCCCACTGCAACTTGTGAACTCCATCATTCATCCAGGACTGAGATGCAAATGTCACAGTAATGCAAGCAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
3UTR TCA 90 bp CCTCCTGTTTTGGTAATAACAAGAAACAAGCGGTCAACCACAAGTTaGTTTCTAATTAGCCCTCCTGGATCTTCCTGGAAAAGCCTGAGC +
Preference number: 1 (lower is better)
Translates to: PPVLVITRNKRSTTS*FLISPPGSSWKSLS
Trigger: GCTCAGGCTTTTCCAGGAAGATCCAGGAGGGCTAATTAGAAATCAACTTGTGGTTGACCGCTTGTTTCTTGTTATTACCAAAACAGGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
3UTR GCA 90 bp ACAAATGATATGTTCGGTTCCTGGGAGGATGGAGAATACTTTAAATaGATGGTCTTTCTCCCAGGAAATGATGGCTCAGTGATCACGATG +
Preference number: 1 (lower is better)
Translates to: TNDMFGSWEDGEYFK*MVFLPGNDGSVITM
Trigger: CATCGTGATCACTGAGCCATCATTTCCTGGGAGAAAGACCATGCATTTAAAGTATTCTCCATCCTCCCAGGAACCGAACATATCATTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
3UTR-3UTR CCA 90 bp GGCTGCAGCGCGAGCAGAGCGGTTGGAGGGGCGCCTCCCCCAACGCTGGTTCCATGGGATTCCGCCTCATaGGTTTCCCTCATTTTGGTC +
Preference number: 2 (lower is better)
Translates to: GCSASRAVGGAPPPTLVPWDSAS*VSLILV
Trigger: GACCAAAATGAGGGAAACCCATGAGGCGGAATCCCA...TGGAACCAGCGTTGGGGGAGGCGCCCCTCCAACCGCTCTGCTCGCGCTGCAGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
3UTR-3UTR CCA 90 bp CTGCAGCGCGAGCAGAGCGGTTGGAGGGGCGCCTCCCCCAACGCTGGTTCCACTGCCTTCAGGTACATGTaGGATTCCGCCTCATGGGTT +
Preference number: 2 (lower is better)
Translates to: LQREQSGWRGASPNAGSTAFRYM*DSASWV
Trigger: AACCCATGAGGCGGAATCCCACATGTACCTGAAGGC...AGTGGAACCAGCGTTGGGGGAGGCGCCCCTCCAACCGCTCTGCTCGCGCTGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
3UTR-3UTR CCA 90 bp TGCAGCGCGAGCAGAGCGGTTGGAGGGGCGCCTCCCCCAACGCTGGTTCCACTGTTGAATTGGGCCCATTaGCGCTTCACGGTGGTTTGG +
Preference number: 2 (lower is better)
Translates to: CSASRAVGGAPPPTLVPLLNWAH*RFTVVW
Trigger: CCAAACCACCGTGAAGCGCCAATGGGCCCAATTCAA...CAGTGGAACCAGCGTTGGGGGAGGCGCCCCTCCAACCGCTCTGCTCGCGCTGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
3UTR-3UTR TCA 90 bp GATGGCAGATGTAAATTGGGATGTCGCCAGCCTCCGCAGCAGCGGCTGCAGCGCCCAGCGGGAACCGGATaGGAAGGCCAGGGAAAGGAA +
Preference number: 2 (lower is better)
Translates to: DGRCKLGCRQPPQQRLQRPAGTG*EGQGKE
Trigger: TTCCTTTCCCTGGCCTTCTCATCCGGTTCCCGCTGG...GCGCTGCAGCCGCTGCTGCGGAGGCTGGCGACATCCCAATTTACATCTGCCATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
3UTR-3UTR CCA 90 bp TGCAGCGCGAGCAGAGCGGTTGGAGGGGCGCCTCCCCCAACGCTGGTTCCACTGGGGTTTCCCTCATTTTaGTCACAAGCACCCGGACAA +
Preference number: 2 (lower is better)
Translates to: CSASRAVGGAPPPTLVPLGFPSF*SQAPGQ
Trigger: TTGTCCGGGTGCTTGTGACCAAAATGAGGGAAACCC...CAGTGGAACCAGCGTTGGGGGAGGCGCCCCTCCAACCGCTCTGCTCGCGCTGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
3UTR-3UTR CCA 90 bp GGCTGCAGCGCGAGCAGAGCGGTTGGAGGGGCGCCTCCCCCAACGCTGGTTCCATCCCAAGCATCTTGTTaGAAGGTCTCCAGGGAAAGA +
Preference number: 2 (lower is better)
Translates to: GCSASRAVGGAPPPTLVPSQASC*KVSRER
Trigger: TCTTTCCCTGGAGACCTTCCAACAAGATGCTTGGGA...TGGAACCAGCGTTGGGGGAGGCGCCCCTCCAACCGCTCTGCTCGCGCTGCAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
3UTR-3UTR GCA 90 bp GGCTGCAGCGCGAGCAGAGCGGTTGGAGGGGCGCCTCCCCCAACGCTGGTTCCATTTGGACCTCATTGTTaGAGAAGCAGTAGATGGTCG +
Preference number: 2 (lower is better)
Translates to: GCSASRAVGGAPPPTLVPFGPHC*RSSRWS
Trigger: CGACCATCTACTGCTTCTGCAACAATGAGGTCCAAA...TGGAACCAGCGTTGGGGGAGGCGCCCCTCCAACCGCTCTGCTCGCGCTGCAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
3UTR CAA 90 bp GGTTGTTGGCTGGTTCATTCCTCAGCTCCTGATGGCAGATGTAAATaGGGATGTCGCCAGCCTCCGCAGCAGCGGCTGCAGCGCGAGCAG +
Preference number: 2 (lower is better)
Translates to: GCWLVHSSAPDGRCK*GCRQPPQQRLQREQ
Trigger: CTGCTCGCGCTGCAGCCGCTGCTGCGGAGGCTGGCGACATCCCAATTTACATCTGCCATCAGGAGCTGAGGAATGAACCAGCCAACAACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
3UTR-3UTR CCA 90 bp GATGGCAGATGTAAATTGGGATGTCGCCAGCCTCCGCAGCAGCGGCTGCAGCGCAGCATGGATAGTGGTTaGCACCAGCGGGAACCGGAT +
Preference number: 2 (lower is better)
Translates to: DGRCKLGCRQPPQQRLQRSMDSG*HQREPD
Trigger: ATCCGGTTCCCGCTGGTGCCAACCACTATCCATGCT...GCGCTGCAGCCGCTGCTGCGGAGGCTGGCGACATCCCAATTTACATCTGCCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
3UTR-3UTR CCA 90 bp GCTCCTGATGGCAGATGTAAATTGGGATGTCGCCAGCCTCCGCAGCAGCGGCTGGCACAAGGATCATGGTaGCCTTCACAGCCTTCAGGT +
Preference number: 2 (lower is better)
Translates to: APDGRCKLGCRQPPQQRLAQGSW*PSQPSG
Trigger: ACCTGAAGGCTGTGAAGGCCACCATGATCCTTGTGC...CAGCCGCTGCTGCGGAGGCTGGCGACATCCCAATTTACATCTGCCATCAGGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
3UTR-3UTR CCA 90 bp GATGGCAGATGTAAATTGGGATGTCGCCAGCCTCCGCAGCAGCGGCTGCAGCGCCGCTTCACGGTGGTTTaGACCTCATTGTTGCAGAAG +
Preference number: 2 (lower is better)
Translates to: DGRCKLGCRQPPQQRLQRRFTVV*TSLLQK
Trigger: CTTCTGCAACAATGAGGTCCAAACCACCGTGAAGCG...GCGCTGCAGCCGCTGCTGCGGAGGCTGGCGACATCCCAATTTACATCTGCCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
3UTR-3UTR CCA 90 bp GCTCCTGATGGCAGATGTAAATTGGGATGTCGCCAGCCTCCGCAGCAGCGGCTGATTGGCGCTTCACGGTaGTTTGGACCTCATTGTTGC +
Preference number: 2 (lower is better)
Translates to: APDGRCKLGCRQPPQQRLIGASR*FGPHCC
Trigger: GCAACAATGAGGTCCAAACCACCGTGAAGCGCCAAT...CAGCCGCTGCTGCGGAGGCTGGCGACATCCCAATTTACATCTGCCATCAGGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
3UTR CAA 90 bp GCGCCTCCCCCAACGCTGGTTCCACTGAATTTTGAATTGGGCCCATaGGCGCTTCACGGTGGTTTGGACCTCATTGTTGCAGAAGCAGTA +
Preference number: 2 (lower is better)
Translates to: APPPTLVPLNFELGP*ALHGGLDLIVAEAV
Trigger: TACTGCTTCTGCAACAATGAGGTCCAAACCACCGTGAAGCGCCAATGGGCCCAATTCAAAATTCAGTGGAACCAGCGTTGGGGGAGGCGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
3UTR-3UTR TCA 90 bp CTTGTTGGAAGGTCTCCAGGGAAAGACGACAAACTGGATTCCCAGCAGGGGCACCCACAAGTGCCGCCATaGCAGGTCCATGGATTATGT +
Preference number: 2 (lower is better)
Translates to: LVGRSPGKDDKLDSQQGHPQVPP*QVHGLC
Trigger: ACATAATCCATGGACCTGTCATGGCGGCACTTGTGG...GTGCCCCTGCTGGGAATCCAGTTTGTCGTCTTTCCCTGGAGACCTTCCAACAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
3UTR-3UTR TCA 90 bp AGGATCATGGTGGCCTTCACAGCCTTCAGGTACATGTGGGATTCCGCCTCATGGCCACAAGTGCCGCCATaGCAGGTCCATGGATTATGT +
Preference number: 2 (lower is better)
Translates to: RIMVAFTAFRYMWDSASWPQVPP*QVHGLC
Trigger: ACATAATCCATGGACCTGTCATGGCGGCACTTGTGG...CCATGAGGCGGAATCCCACATGTACCTGAAGGCTGTGAAGGCCACCATGATCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
3UTR-3UTR GCA 90 bp TCTTGTTGGAAGGTCTCCAGGGAAAGACGACAAACTGGATTCCCAGCAGGGGCAGAAATTGACCACAAGTaGCGCCATGACAGGTCCATG +
Preference number: 2 (lower is better)
Translates to: SCWKVSRERRQTGFPAGAEIDHK*RHDRSM
Trigger: CATGGACCTGTCATGGCGGCACTTGTGGTCAATTTC...TGCCCCTGCTGGGAATCCAGTTTGTCGTCTTTCCCTGGAGACCTTCCAACAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
3UTR-3UTR CCA 90 bp CTTCAGGTACATGTGGGATTCCGCCTCATGGGTTTCCCTCATTTTGGTCACAAGAGCATGGATAGTGGTTaGCACCAGCGGGAACCGGAT +
Preference number: 2 (lower is better)
Translates to: LQVHVGFRLMGFPHFGHKSMDSG*HQREPD
Trigger: ATCCGGTTCCCGCTGGTGCCAACCACTATCCATGCT...CTTGTGACCAAAATGAGGGAAACCCATGAGGCGGAATCCCACATGTACCTGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
3UTR-3UTR TCA 90 bp AGCAAAAAGAAGAAATTGACCACAAGTGCCGCCATGACAGGTCCATGGATTATGCCAGCGGGAACCGGATaGGAAGGCCAGGGAAAGGAA +
Preference number: 2 (lower is better)
Translates to: SKKKKLTTSAAMTGPWIMPAGTG*EGQGKE
Trigger: TTCCTTTCCCTGGCCTTCTCATCCGGTTCCCGCTGG...CATAATCCATGGACCTGTCATGGCGGCACTTGTGGTCAATTTCTTCTTTTTGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
3UTR-3UTR CCA 90 bp TTTGAATTGGGCCCATTGGCGCTTCACGGTGGTTTGGACCTCATTGTTGCAGAAGCCCTGGTAATAGCATaGATAGTGGTTGGCACCAGC +
Preference number: 2 (lower is better)
Translates to: FELGPLALHGGLDLIVAEALVIA*IVVGTS
Trigger: GCTGGTGCCAACCACTATCCATGCTATTACCAGGGC...TTCTGCAACAATGAGGTCCAAACCACCGTGAAGCGCCAATGGGCCCAATTCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
3UTR-3UTR GCA 90 bp ACAACAGCTAGGTCCTGCCCAATGGACAGGCTTGTCCAAAACCAAGCTGAGCATATGGAGTTCACAAGTTaGAGTGGGAGACTCCATTCC +
Preference number: 2 (lower is better)
Translates to: TTARSCPMDRLVQNQAEHMEFTS*SGRLHS
Trigger: GGAATGGAGTCTCCCACTGCAACTTGTGAACTCCAT...ATGCTCAGCTTGGTTTTGGACAAGCCTGTCCATTGGGCAGGACCTAGCTGTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
3UTR CAA 90 bp GCCTCATGGGTTTCCCTCATTTTGGTCACAAGCACCCGGACAATGTaGAGCAAAAAGAAGAAATTGACCACAAGTGCCGCCATGACAGGT +
Preference number: 2 (lower is better)
Translates to: ASWVSLILVTSTRTM*SKKKKLTTSAAMTG
Trigger: ACCTGTCATGGCGGCACTTGTGGTCAATTTCTTCTTTTTGCTCAACATTGTCCGGGTGCTTGTGACCAAAATGAGGGAAACCCATGAGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
3UTR-3UTR CCA 90 bp GCAGATGACTCTTGCTCTATGATATTCAAAGGGATGATCTCAGCACTCTCCTCGGGAAAGACGACAAACTaGATTCCCAGCAGGGGCACA +
Preference number: 2 (lower is better)
Translates to: ADDSCSMIFKGMISALSSGKTTN*IPSRGT
Trigger: TGTGCCCCTGCTGGGAATCCAGTTTGTCGTCTTTCC...CGAGGAGAGTGCTGAGATCATCCCTTTGAATATCATAGAGCAAGAGTCATCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
3UTR CAA 90 bp GTGACATTTGCATCTCAGTCCTGGATGAATGATGGAGTTCACAAGTaGCAGTGGGAGACTCCATTCCTAGACTGTCTCCCAAAGCAACAG +
Preference number: 2 (lower is better)
Translates to: VTFASQSWMNDGVHK*QWETPFLDCLPKQQ
Trigger: CTGTTGCTTTGGGAGACAGTCTAGGAATGGAGTCTCCCACTGCAACTTGTGAACTCCATCATTCATCCAGGACTGAGATGCAAATGTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
3UTR CAA 90 bp GCCTTCAGGTACATGTGGGATTCCGCCTCATGGGTTTCCCTCATTTaGGTCACAAGCACCCGGACAATGTTGAGCAAAAAGAAGAAATTG +
Preference number: 2 (lower is better)
Translates to: AFRYMWDSASWVSLI*VTSTRTMLSKKKKL
Trigger: CAATTTCTTCTTTTTGCTCAACATTGTCCGGGTGCTTGTGACCAAAATGAGGGAAACCCATGAGGCGGAATCCCACATGTACCTGAAGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
3UTR CAA 90 bp TTGCTCTATGATATTCAAAGGGATGATCTCAGCACTCTCCTCGCCTaGGTTGTTGGCTGGTTCATTCCTCAGCTCCTGATGGCAGATGTA +
Preference number: 2 (lower is better)
Translates to: LLYDIQRDDLSTLLA*VVGWFIPQLLMADV
Trigger: TACATCTGCCATCAGGAGCTGAGGAATGAACCAGCCAACAACCAAGGCGAGGAGAGTGCTGAGATCATCCCTTTGAATATCATAGAGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
3UTR-3UTR TCA 90 bp TCACAAGTTGCAGTGGGAGACTCCATTCCTAGACTGTCTCCCAAAGCAACAGTAGAAATGATGGCTCAGTaGTCACGATGCTGTGTTTGC +
Preference number: 2 (lower is better)
Translates to: SQVAVGDSIPRLSPKATVEMMAQ*SRCCVC
Trigger: GCAAACACAGCATCGTGATCACTGAGCCATCATTTC...TACTGTTGCTTTGGGAGACAGTCTAGGAATGGAGTCTCCCACTGCAACTTGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
3UTR-3UTR TCA 90 bp TCACAAGTTGCAGTGGGAGACTCCATTCCTAGACTGTCTCCCAAAGCAACAGTACTTTCTCCCAGGAAATaGTGGCTCAGTGATCACGAT +
Preference number: 2 (lower is better)
Translates to: SQVAVGDSIPRLSPKATVLSPRK*WLSDHD
Trigger: ATCGTGATCACTGAGCCATCATTTCCTGGGAGAAAG...TACTGTTGCTTTGGGAGACAGTCTAGGAATGGAGTCTCCCACTGCAACTTGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
3UTR-3UTR CCA 90 bp GGAGTTCACAAGTTGCAGTGGGAGACTCCATTCCTAGACTGTCTCCCAAAGCAAGATATGTTCGGTTCCTaGGAGGATGGAGAATACTTT +
Preference number: 2 (lower is better)
Translates to: GVHKLQWETPFLDCLPKQDMFGS*EDGEYF
Trigger: AAAGTATTCTCCATCCTCCCAGGAACCGAACATATC...TTGCTTTGGGAGACAGTCTAGGAATGGAGTCTCCCACTGCAACTTGTGAACTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
3UTR-3UTR CCA 90 bp CAGAGAGTGCATCACGTAATCATATATCTTCCCAAGCATCTTGTTGGAAGGTCTGCCCTGGTAATAGCATaGATAGTGGTTGGCACCAGC +
Preference number: 2 (lower is better)
Translates to: QRVHHVIIYLPKHLVGRSALVIA*IVVGTS
Trigger: GCTGGTGCCAACCACTATCCATGCTATTACCAGGGC...AGACCTTCCAACAAGATGCTTGGGAAGATATATGATTACGTGATGCACTCTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
3UTR-3UTR GCA 90 bp GCAGATGACTCTTGCTCTATGATATTCAAAGGGATGATCTCAGCACTCTCCTCGTTTGGACCTCATTGTTaGAGAAGCAGTAGATGGTCG +
Preference number: 2 (lower is better)
Translates to: ADDSCSMIFKGMISALSSFGPHC*RSSRWS
Trigger: CGACCATCTACTGCTTCTGCAACAATGAGGTCCAAA...CGAGGAGAGTGCTGAGATCATCCCTTTGAATATCATAGAGCAAGAGTCATCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
3UTR-3UTR CCA 90 bp TCACAAGTTGCAGTGGGAGACTCCATTCCTAGACTGTCTCCCAAAGCAACAGTAGATATGTTCGGTTCCTaGGAGGATGGAGAATACTTT +
Preference number: 2 (lower is better)
Translates to: SQVAVGDSIPRLSPKATVDMFGS*EDGEYF
Trigger: AAAGTATTCTCCATCCTCCCAGGAACCGAACATATC...TACTGTTGCTTTGGGAGACAGTCTAGGAATGGAGTCTCCCACTGCAACTTGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
3UTR-3UTR TCA 90 bp GGAGTTCACAAGTTGCAGTGGGAGACTCCATTCCTAGACTGTCTCCCAAAGCAAATAATTCTTCACAAATaGTATGTTCGGTTCCTGGGA +
Preference number: 2 (lower is better)
Translates to: GVHKLQWETPFLDCLPKQIILHK*YVRFLG
Trigger: TCCCAGGAACCGAACATATCATTTGTGAAGAATTAT...TTGCTTTGGGAGACAGTCTAGGAATGGAGTCTCCCACTGCAACTTGTGAACTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
3UTR-3UTR CCA 90 bp GAAGCTGGGTGGAAAGCAGTTAATGGACTTATGTGGAGTCTTTTAATTACCAATCTAGGTCCTGCCCAATaGACAGGCTTGTCCAAAACC +
Preference number: 2 (lower is better)
Translates to: EAGWKAVNGLMWSLLITNLGPAQ*TGLSKT
Trigger: GGTTTTGGACAAGCCTGTCCATTGGGCAGGACCTAG...ATTGGTAATTAAAAGACTCCACATAAGTCCATTAACTGCTTTCCACCCAGCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
3UTR-3UTR TCA 90 bp ACATATTTACTAATCTCTCTATTAGAAAGCCGCTTTGTCTTGCAGAGGTCACGTGAAATGATGGCTCAGTaGTCACGATGCTGTGTTTGC +
Preference number: 2 (lower is better)
Translates to: TYLLISLLESRFVLQRSREMMAQ*SRCCVC
Trigger: GCAAACACAGCATCGTGATCACTGAGCCATCATTTC...ACGTGACCTCTGCAAGACAAAGCGGCTTTCTAATAGAGAGATTAGTAAATATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
3UTR-3UTR TCA 90 bp TCTTTTGCATTCAAAGCATACATCTTCCTGCCAAATGCAGGTCTTTTTCTTCACCTTTCTCCCAGGAAATaGTGGCTCAGTGATCACGAT +
Preference number: 2 (lower is better)
Translates to: SFAFKAYIFLPNAGLFLHLSPRK*WLSDHD
Trigger: ATCGTGATCACTGAGCCATCATTTCCTGGGAGAAAG...GTGAAGAAAAAGACCTGCATTTGGCAGGAAGATGTATGCTTTGAATGCAAAAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
3UTR-3UTR CCA 90 bp GAAGCTGGGTGGAAAGCAGTTAATGGACTTATGTGGAGTCTTTTAATTACCAATGTTCACAAGTTGCAGTaGGAGACTCCATTCCTAGAC +
Preference number: 2 (lower is better)
Translates to: EAGWKAVNGLMWSLLITNVHKLQ*ETPFLD
Trigger: GTCTAGGAATGGAGTCTCCCACTGCAACTTGTGAAC...ATTGGTAATTAAAAGACTCCACATAAGTCCATTAACTGCTTTCCACCCAGCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
3UTR CAA 90 bp CACCCAAGGGCAAGAGGTAATCTGCTTTATAAACCTTGGAGTAATTaGCTTTATAAATCCTGGAGTTTAGGGGAGTGGCAAACTCTCTTT +
Preference number: 2 (lower is better)
Translates to: HPRARGNLLYKPWSN*LYKSWSLGEWQTLF
Trigger: AAAGAGAGTTTGCCACTCCCCTAAACTCCAGGATTTATAAAGCAAATTACTCCAAGGTTTATAAAGCAGATTACCTCTTGCCCTTGGGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
3UTR-3UTR TCA 90 bp ACATATTTACTAATCTCTCTATTAGAAAGCCGCTTTGTCTTGCAGAGGTCACGTGGAGCACCCTGTATCTaGACTAGGTCAATTTCATTG +
Preference number: 2 (lower is better)
Translates to: TYLLISLLESRFVLQRSRGAPCI*TRSISL
Trigger: CAATGAAATTGACCTAGTTCAGATACAGGGTGCTCC...ACGTGACCTCTGCAAGACAAAGCGGCTTTCTAATAGAGAGATTAGTAAATATGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
3UTR-3UTR GCA 90 bp TCTTTTGCATTCAAAGCATACATCTTCCTGCCAAATGCAGGTCTTTTTCTTCACAAAGCCGCTTTGTCTTaGAGAGGTCACGTAGTTCAT +
Preference number: 2 (lower is better)
Translates to: SFAFKAYIFLPNAGLFLHKAALS*RGHVVH
Trigger: ATGAACTACGTGACCTCTGCAAGACAAAGCGGCTTT...GTGAAGAAAAAGACCTGCATTTGGCAGGAAGATGTATGCTTTGAATGCAAAAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
3UTR-3UTR CCA 90 bp GAAGCTGGGTGGAAAGCAGTTAATGGACTTATGTGGAGTCTTTTAATTACCAATTGGAGTTTAGGGGAGTaGCAAACTCTCTTTAAAGGG +
Preference number: 2 (lower is better)
Translates to: EAGWKAVNGLMWSLLITNWSLGE*QTLFKG
Trigger: CCCTTTAAAGAGAGTTTGCCACTCCCCTAAACTCCA...ATTGGTAATTAAAAGACTCCACATAAGTCCATTAACTGCTTTCCACCCAGCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
3UTR-3UTR GCA 90 bp TCTTTTGCATTCAAAGCATACATCTTCCTGCCAAATGCAGGTCTTTTTCTTCACGGAGAATACTTTAAATaGATGGTCTTTCTCCCAGGA +
Preference number: 2 (lower is better)
Translates to: SFAFKAYIFLPNAGLFLHGEYFK*MVFLPG
Trigger: TCCTGGGAGAAAGACCATGCATTTAAAGTATTCTCC...GTGAAGAAAAAGACCTGCATTTGGCAGGAAGATGTATGCTTTGAATGCAAAAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
3UTR-3UTR GCA 90 bp GAAGCTGGGTGGAAAGCAGTTAATGGACTTATGTGGAGTCTTTTAATTACCAATGGAGAATACTTTAAATaGATGGTCTTTCTCCCAGGA +
Preference number: 2 (lower is better)
Translates to: EAGWKAVNGLMWSLLITNGEYFK*MVFLPG
Trigger: TCCTGGGAGAAAGACCATGCATTTAAAGTATTCTCC...ATTGGTAATTAAAAGACTCCACATAAGTCCATTAACTGCTTTCCACCCAGCTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
3UTR CAA 90 bp TTCTTCACATATTTACTAATCTCTCTATTAGAAAGCCGCTTTGTCTaGCAGAGGTCACGTAGTTCATGTGGTTTACATTGTAAGGATGGT +
Preference number: 2 (lower is better)
Translates to: FFTYLLISLLESRFV*QRSRSSCGLHCKDG
Trigger: ACCATCCTTACAATGTAAACCACATGAACTACGTGACCTCTGCAAGACAAAGCGGCTTTCTAATAGAGAGATTAGTAAATATGTGAAGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
3UTR-3UTR GCA 90 bp CTGTTGCAAATTCACAAATTAATTTCAGGTGCCAGTAACGATACTGGTTTATTCCATTACTGTGACATTTaGATCTCAGTCCTGGATGAA +
Preference number: 2 (lower is better)
Translates to: LLQIHKLISGASNDTGLFHYCDI*ISVLDE
Trigger: TTCATCCAGGACTGAGATGCAAATGTCACAGTAATG...GAATAAACCAGTATCGTTACTGGCACCTGAAATTAATTTGTGAATTTGCAACAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
3UTR-3UTR CAA 90 bp GGCTGCAGCGCGAGCAGAGCGGTTGGAGGGGCGCCTCCCCCAACGCTGGTTCCAACACTCAGCCAGCAGTaGTCATTGAAGTACACGGCC +
Preference number: 3 (lower is better)
Translates to: GCSASRAVGGAPPPTLVPTLSQQ*SLKYTA
Trigger: GGCCGTGTACTTCAATGACAACTGCTGGCTGAGTGT...TGGAACCAGCGTTGGGGGAGGCGCCCCTCCAACCGCTCTGCTCGCGCTGCAGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
3UTR-3UTR CAA 90 bp TGCAGCGCGAGCAGAGCGGTTGGAGGGGCGCCTCCCCCAACGCTGGTTCCACTGGCGCTTCACGGTGGTTaGGACCTCATTGTTGCAGAA +
Preference number: 3 (lower is better)
Translates to: CSASRAVGGAPPPTLVPLALHGG*DLIVAE
Trigger: TTCTGCAACAATGAGGTCCAAACCACCGTGAAGCGC...CAGTGGAACCAGCGTTGGGGGAGGCGCCCCTCCAACCGCTCTGCTCGCGCTGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
3UTR CCA 72 bp TGGTTCATTCCTCAGCTCCTGATGGCAGATGTAAATTaGGATGTCGCCAGCCTCCGCAGCAGCGGCTGCAGC +
Preference number: 3 (lower is better)
Translates to: WFIPQLLMADVN*DVASLRSSGCS
Trigger: GCTGCAGCCGCTGCTGCGGAGGCTGGCGACATCCCAATTTACATCTGCCATCAGGAGCTGAGGAATGAACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
3UTR-3UTR CAA 90 bp GTGGCCTTCACAGCCTTCAGGTACATGTGGGATTCCGCCTCATGGGTTTCCCTCAGCCAGCAGTTGTCATaGAAGTACACGGCCCTGGTA +
Preference number: 3 (lower is better)
Translates to: VAFTAFRYMWDSASWVSLSQQLS*KYTALV
Trigger: TACCAGGGCCGTGTACTTCAATGACAACTGCTGGCT...GAGGGAAACCCATGAGGCGGAATCCCACATGTACCTGAAGGCTGTGAAGGCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
3UTR CCA 72 bp CAGTTGTCATTGAAGTACACGGCCCTGGTAATAGCATaGATAGTGGTTGGCACCAGCGGGAACCGGATGAGA +
Preference number: 3 (lower is better)
Translates to: QLSLKYTALVIA*IVVGTSGNRMR
Trigger: TCTCATCCGGTTCCCGCTGGTGCCAACCACTATCCATGCTATTACCAGGGCCGTGTACTTCAATGACAACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
3UTR CCA 72 bp TTCACAGCCTTCAGGTACATGTGGGATTCCGCCTCATaGGTTTCCCTCATTTTGGTCACAAGCACCCGGACA +
Preference number: 3 (lower is better)
Translates to: FTAFRYMWDSAS*VSLILVTSTRT
Trigger: TGTCCGGGTGCTTGTGACCAAAATGAGGGAAACCCATGAGGCGGAATCCCACATGTACCTGAAGGCTGTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
3UTR CCA 72 bp AGGATCATGGTGGCCTTCACAGCCTTCAGGTACATGTaGGATTCCGCCTCATGGGTTTCCCTCATTTTGGTC +
Preference number: 3 (lower is better)
Translates to: RIMVAFTAFRYM*DSASWVSLILV
Trigger: GACCAAAATGAGGGAAACCCATGAGGCGGAATCCCACATGTACCTGAAGGCTGTGAAGGCCACCATGATCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
3UTR-3UTR CAA 90 bp TCTTGTTGGAAGGTCTCCAGGGAAAGACGACAAACTGGATTCCCAGCAGGGGCAAGCAAAAAGAAGAAATaGACCACAAGTGCCGCCATG +
Preference number: 3 (lower is better)
Translates to: SCWKVSRERRQTGFPAGASKKKK*TTSAAM
Trigger: CATGGCGGCACTTGTGGTCAATTTCTTCTTTTTGCT...TGCCCCTGCTGGGAATCCAGTTTGTCGTCTTTCCCTGGAGACCTTCCAACAAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
3UTR-3UTR CAA 90 bp CTTCAGGTACATGTGGGATTCCGCCTCATGGGTTTCCCTCATTTTGGTCACAAGAGCAAAAAGAAGAAATaGACCACAAGTGCCGCCATG +
Preference number: 3 (lower is better)
Translates to: LQVHVGFRLMGFPHFGHKSKKKK*TTSAAM
Trigger: CATGGCGGCACTTGTGGTCAATTTCTTCTTTTTGCT...CTTGTGACCAAAATGAGGGAAACCCATGAGGCGGAATCCCACATGTACCTGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
3UTR-3UTR CAA 90 bp GCAGATGACTCTTGCTCTATGATATTCAAAGGGATGATCTCAGCACTCTCCTCGATCTTCCCAAGCATCTaGTTGGAAGGTCTCCAGGGA +
Preference number: 3 (lower is better)
Translates to: ADDSCSMIFKGMISALSSIFPSI*LEGLQG
Trigger: TCCCTGGAGACCTTCCAACAAGATGCTTGGGAAGAT...CGAGGAGAGTGCTGAGATCATCCCTTTGAATATCATAGAGCAAGAGTCATCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
3UTR-3UTR CAA 90 bp GAAGCTGGGTGGAAAGCAGTTAATGGACTTATGTGGAGTCTTTTAATTACCAATGCCCAATGGACAGGCTaGTCCAAAACCAAGCTGAGC +
Preference number: 3 (lower is better)
Translates to: EAGWKAVNGLMWSLLITNAQWTG*SKTKLS
Trigger: GCTCAGCTTGGTTTTGGACAAGCCTGTCCATTGGGC...ATTGGTAATTAAAAGACTCCACATAAGTCCATTAACTGCTTTCCACCCAGCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
3UTR GCA 72 bp ATGTTCGGTTCCTGGGAGGATGGAGAATACTTTAAATaGATGGTCTTTCTCCCAGGAAATGATGGCTCAGTG +
Preference number: 3 (lower is better)
Translates to: MFGSWEDGEYFK*MVFLPGNDGSV
Trigger: CACTGAGCCATCATTTCCTGGGAGAAAGACCATGCATTTAAAGTATTCTCCATCCTCCCAGGAACCGAACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
3UTR-3UTR CAA 90 bp AATGAATCAGAGAGTGCATCACGTAATCATATATCTTCCCAAGCATCTTGTTGGTGGGTTTCCCTCATTTaGGTCACAAGCACCCGGACA +
Preference number: 3 (lower is better)
Translates to: NESESASRNHISSQASCWWVSLI*VTSTRT
Trigger: TGTCCGGGTGCTTGTGACCAAAATGAGGGAAACCCA...CCAACAAGATGCTTGGGAAGATATATGATTACGTGATGCACTCTCTGATTCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
3UTR CCA 72 bp TTTGCTTGCATTACTGTGACATTTGCATCTCAGTCCTaGATGAATGATGGAGTTCACAAGTTGCAGTGGGAG +
Preference number: 3 (lower is better)
Translates to: FACITVTFASQS*MNDGVHKLQWE
Trigger: CTCCCACTGCAACTTGTGAACTCCATCATTCATCCAGGACTGAGATGCAAATGTCACAGTAATGCAAGCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
3UTR CCA 72 bp GCATCACGTAATCATATATCTTCCCAAGCATCTTGTTaGAAGGTCTCCAGGGAAAGACGACAAACTGGATTC +
Preference number: 3 (lower is better)
Translates to: ASRNHISSQASC*KVSRERRQTGF
Trigger: GAATCCAGTTTGTCGTCTTTCCCTGGAGACCTTCCAACAAGATGCTTGGGAAGATATATGATTACGTGATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
3UTR-3UTR CAA 90 bp CTGTTGCAAATTCACAAATTAATTTCAGGTGCCAGTAACGATACTGGTTTATTCGATGGAGTTCACAAGTaGCAGTGGGAGACTCCATTC +
Preference number: 3 (lower is better)
Translates to: LLQIHKLISGASNDTGLFDGVHK*QWETPF
Trigger: GAATGGAGTCTCCCACTGCAACTTGTGAACTCCATC...GAATAAACCAGTATCGTTACTGGCACCTGAAATTAATTTGTGAATTTGCAACAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
3UTR-3UTR CAA 90 bp CTGTTGCAAATTCACAAATTAATTTCAGGTGCCAGTAACGATACTGGTTTATTCGAAAGCCGCTTTGTCTaGCAGAGGTCACGTAGTTCA +
Preference number: 3 (lower is better)
Translates to: LLQIHKLISGASNDTGLFESRFV*QRSRSS
Trigger: TGAACTACGTGACCTCTGCAAGACAAAGCGGCTTTC...GAATAAACCAGTATCGTTACTGGCACCTGAAATTAATTTGTGAATTTGCAACAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
3UTR-3UTR CAA 90 bp ACATATTTACTAATCTCTCTATTAGAAAGCCGCTTTGTCTTGCAGAGGTCACGTATAAATGGCTCAGTATaGACAAGGAGCACCCTGTAT +
Preference number: 3 (lower is better)
Translates to: TYLLISLLESRFVLQRSRINGSV*TRSTLY
Trigger: ATACAGGGTGCTCCTTGTCAATACTGAGCCATTTAT...ACGTGACCTCTGCAAGACAAAGCGGCTTTCTAATAGAGAGATTAGTAAATATGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
3UTR TCA 72 bp TTGGTAATAACAAGAAACAAGCGGTCAACCACAAGTTaGTTTCTAATTAGCCCTCCTGGATCTTCCTGGAAA +
Preference number: 3 (lower is better)
Translates to: LVITRNKRSTTS*FLISPPGSSWK
Trigger: TTTCCAGGAAGATCCAGGAGGGCTAATTAGAAATCAACTTGTGGTTGACCGCTTGTTTCTTGTTATTACCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR CCA 90 bp TGCAGCGCGAGCAGAGCGGTTGGAGGGGCGCCTCCCCCAACGCTGGTTCCACTGAGCATGGATAGTGGTTaGCACCAGCGGGAACCGGAT +
Preference number: 4 (lower is better)
Translates to: CSASRAVGGAPPPTLVPLSMDSG*HQREPD
Trigger: ATCCGGTTCCCGCTGGTGCCAACCACTATCCATGCT...CAGTGGAACCAGCGTTGGGGGAGGCGCCCCTCCAACCGCTCTGCTCGCGCTGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
CDS-3UTR CCA 90 bp TGCAGCGCGAGCAGAGCGGTTGGAGGGGCGCCTCCCCCAACGCTGGTTCCACTGGCACTCTCCTCGCCTTaGTTGTTGGCTGGTTCATTC +
Preference number: 4 (lower is better)
Translates to: CSASRAVGGAPPPTLVPLALSSP*LLAGSF
Trigger: GAATGAACCAGCCAACAACCAAGGCGAGGAGAGTGC...CAGTGGAACCAGCGTTGGGGGAGGCGCCCCTCCAACCGCTCTGCTCGCGCTGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
CDS-3UTR TCA 90 bp TGCAGCGCGAGCAGAGCGGTTGGAGGGGCGCCTCCCCCAACGCTGGTTCCACTGGGTTCCACTGAATTTTaGATTGGGCCCATTGGCGCT +
Preference number: 4 (lower is better)
Translates to: CSASRAVGGAPPPTLVPLGSTEF*IGPIGA
Trigger: AGCGCCAATGGGCCCAATTCAAAATTCAGTGGAACC...CAGTGGAACCAGCGTTGGGGGAGGCGCCCCTCCAACCGCTCTGCTCGCGCTGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
CDS-3UTR GCA 90 bp CTGCAGCGCGAGCAGAGCGGTTGGAGGGGCGCCTCCCCCAACGCTGGTTCCACTGCCATCCATCCCAGGTaGGATTGCAATATGGACCTT +
Preference number: 4 (lower is better)
Translates to: LQREQSGWRGASPNAGSTAIHPR*DCNMDL
Trigger: AAGGTCCATATTGCAATCGCACCTGGGATGGATGGC...AGTGGAACCAGCGTTGGGGGAGGCGCCCCTCCAACCGCTCTGCTCGCGCTGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
CDS-3UTR CCA 90 bp GGCTGCAGCGCGAGCAGAGCGGTTGGAGGGGCGCCTCCCCCAACGCTGGTTCCAGGTGCGATTGCAATATaGACCTTCTCCTTGGTATGC +
Preference number: 4 (lower is better)
Translates to: GCSASRAVGGAPPPTLVPGAIAI*TFSLVC
Trigger: GCATACCAAGGAGAAGGTCCATATTGCAATCGCACC...TGGAACCAGCGTTGGGGGAGGCGCCCCTCCAACCGCTCTGCTCGCGCTGCAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
CDS-3UTR CCA 90 bp CTGCAGCGCGAGCAGAGCGGTTGGAGGGGCGCCTCCCCCAACGCTGGTTCCACTGCACGAGCTCTCCATTaGGTACTACTTCAACCAGGT +
Preference number: 4 (lower is better)
Translates to: LQREQSGWRGASPNAGSTARALH*VLLQPG
Trigger: ACCTGGTTGAAGTAGTACCCAATGGAGAGCTCGTGC...AGTGGAACCAGCGTTGGGGGAGGCGCCCCTCCAACCGCTCTGCTCGCGCTGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
CDS-3UTR CCA 90 bp AGCGCGAGCAGAGCGGTTGGAGGGGCGCCTCCCCCAACGCTGGTTCCACTGAATGCCTTCAGGTACATGTaGGATTCCGCCTCATGGGTT +
Preference number: 4 (lower is better)
Translates to: SASRAVGGAPPPTLVPLNAFRYM*DSASWV
Trigger: AACCCATGAGGCGGAATCCCACATGTACCTGAAGGC...ATTCAGTGGAACCAGCGTTGGGGGAGGCGCCCCTCCAACCGCTCTGCTCGCGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
CDS-3UTR GCA 90 bp TGCAGCGCGAGCAGAGCGGTTGGAGGGGCGCCTCCCCCAACGCTGGTTCCACTGTTTGGACCTCATTGTTaGAGAAGCAGTAGATGGTCG +
Preference number: 4 (lower is better)
Translates to: CSASRAVGGAPPPTLVPLFGPHC*RSSRWS
Trigger: CGACCATCTACTGCTTCTGCAACAATGAGGTCCAAA...CAGTGGAACCAGCGTTGGGGGAGGCGCCCCTCCAACCGCTCTGCTCGCGCTGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
CDS-3UTR CCA 90 bp TCCACACTCAGCCAGCAGTTGTCATTGAAGTACACGGCCCTGGTAATAGCATGGCGCGAGCAGAGCGGTTaGAGGGGCGCCTCCCCCAAC +
Preference number: 4 (lower is better)
Translates to: STLSQQLSLKYTALVIAWREQSG*RGASPN
Trigger: GTTGGGGGAGGCGCCCCTCCAACCGCTCTGCTCGCG...CCATGCTATTACCAGGGCCGTGTACTTCAATGACAACTGCTGGCTGAGTGTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
CDS-3UTR TCA 90 bp GATGGCAGATGTAAATTGGGATGTCGCCAGCCTCCGCAGCAGCGGCTGCAGCGCCCACAAGTGCCGCCATaGCAGGTCCATGGATTATGT +
Preference number: 4 (lower is better)
Translates to: DGRCKLGCRQPPQQRLQRPQVPP*QVHGLC
Trigger: ACATAATCCATGGACCTGTCATGGCGGCACTTGTGG...GCGCTGCAGCCGCTGCTGCGGAGGCTGGCGACATCCCAATTTACATCTGCCATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
CDS-3UTR TCA 90 bp GTGGCCTTCACAGCCTTCAGGTACATGTGGGATTCCGCCTCATGGGTTTCCCTCCCAGCGGGAACCGGATaGGAAGGCCAGGGAAAGGAA +
Preference number: 4 (lower is better)
Translates to: VAFTAFRYMWDSASWVSLPAGTG*EGQGKE
Trigger: TTCCTTTCCCTGGCCTTCTCATCCGGTTCCCGCTGG...GAGGGAAACCCATGAGGCGGAATCCCACATGTACCTGAAGGCTGTGAAGGCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
CDS-3UTR CCA 90 bp CTTCAGGTACATGTGGGATTCCGCCTCATGGGTTTCCCTCATTTTGGTCACAAGCGCGAGCAGAGCGGTTaGAGGGGCGCCTCCCCCAAC +
Preference number: 4 (lower is better)
Translates to: LQVHVGFRLMGFPHFGHKREQSG*RGASPN
Trigger: GTTGGGGGAGGCGCCCCTCCAACCGCTCTGCTCGCG...CTTGTGACCAAAATGAGGGAAACCCATGAGGCGGAATCCCACATGTACCTGAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
CDS-3UTR CCA 90 bp GATGGCAGATGTAAATTGGGATGTCGCCAGCCTCCGCAGCAGCGGCTGCAGCGCGCCTTGGTTGTTGGCTaGTTCATTCCTCAGCTCCTG +
Preference number: 4 (lower is better)
Translates to: DGRCKLGCRQPPQQRLQRALVVG*FIPQLL
Trigger: CAGGAGCTGAGGAATGAACCAGCCAACAACCAAGGC...GCGCTGCAGCCGCTGCTGCGGAGGCTGGCGACATCCCAATTTACATCTGCCATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
CDS-3UTR GCA 90 bp AGCGCGAGCAGAGCGGTTGGAGGGGCGCCTCCCCCAACGCTGGTTCCACTGAATGCATCCAGAAATAGTTaGAGGCCATCATGTACTGGT +
Preference number: 4 (lower is better)
Translates to: SASRAVGGAPPPTLVPLNASRNS*RPSCTG
Trigger: ACCAGTACATGATGGCCTGCAACTATTTCTGGATGC...ATTCAGTGGAACCAGCGTTGGGGGAGGCGCCCCTCCAACCGCTCTGCTCGCGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
CDS-3UTR GCA 90 bp ACAACAGCTAGGTCCTGCCCAATGGACAGGCTTGTCCAAAACCAAGCTGAGCATGGTGAGGTGCGGACGTaGGCACTTCTCCAACCCGGG +
Preference number: 4 (lower is better)
Translates to: TTARSCPMDRLVQNQAEHGEVRT*ALLQPG
Trigger: CCCGGGTTGGAGAAGTGCGCACGTCCGCACCTCACC...ATGCTCAGCTTGGTTTTGGACAAGCCTGTCCATTGGGCAGGACCTAGCTGTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR CCA 90 bp GCTCCTGATGGCAGATGTAAATTGGGATGTCGCCAGCCTCCGCAGCAGCGGCTGGGAAAGACGACAAACTaGATTCCCAGCAGGGGCACA +
Preference number: 4 (lower is better)
Translates to: APDGRCKLGCRQPPQQRLGKTTN*IPSRGT
Trigger: TGTGCCCCTGCTGGGAATCCAGTTTGTCGTCTTTCC...CAGCCGCTGCTGCGGAGGCTGGCGACATCCCAATTTACATCTGCCATCAGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
CDS-3UTR CCA 90 bp ACAACAGCTAGGTCCTGCCCAATGGACAGGCTTGTCCAAAACCAAGCTGAGCATGGGTGTTCGCAGGTGTaGCTCCAGGGACTCAGGCGC +
Preference number: 4 (lower is better)
Translates to: TTARSCPMDRLVQNQAEHGCSQV*LQGLRR
Trigger: GCGCCTGAGTCCCTGGAGCCACACCTGCGAACACCC...ATGCTCAGCTTGGTTTTGGACAAGCCTGTCCATTGGGCAGGACCTAGCTGTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
3UTR CAA 72 bp GCGCCTCCCCCAACGCTGGTTCCACTGAATTTTGAATaGGGCCCATTGGCGCTTCACGGTGGTTTGGACCTC +
Preference number: 4 (lower is better)
Translates to: APPPTLVPLNFE*GPLALHGGLDL
Trigger: GAGGTCCAAACCACCGTGAAGCGCCAATGGGCCCAATTCAAAATTCAGTGGAACCAGCGTTGGGGGAGGCGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
3UTR CAA 72 bp CTGGTTCATTCCTCAGCTCCTGATGGCAGATGTAAATaGGGATGTCGCCAGCCTCCGCAGCAGCGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: LVHSSAPDGRCK*GCRQPPQQRLQ
Trigger: CTGCAGCCGCTGCTGCGGAGGCTGGCGACATCCCAATTTACATCTGCCATCAGGAGCTGAGGAATGAACCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
CDS-3UTR TCA 90 bp CCTGGTAATAGCATGGATAGTGGTTGGCACCAGCGGGAACCGGATGAGAAGGCCCCACAAGTGCCGCCATaGCAGGTCCATGGATTATGT +
Preference number: 4 (lower is better)
Translates to: PGNSMDSGWHQREPDEKAPQVPP*QVHGLC
Trigger: ACATAATCCATGGACCTGTCATGGCGGCACTTGTGG...GGCCTTCTCATCCGGTTCCCGCTGGTGCCAACCACTATCCATGCTATTACCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
CDS-3UTR TCA 90 bp TCACAAGTTGCAGTGGGAGACTCCATTCCTAGACTGTCTCCCAAAGCAACAGTAATGTCAGCCGCAGGGTaGGGTGCGGACGTGCGCACT +
Preference number: 4 (lower is better)
Translates to: SQVAVGDSIPRLSPKATVMSAAG*GADVRT
Trigger: AGTGCGCACGTCCGCACCTCACCCTGCGGCTGACAT...TACTGTTGCTTTGGGAGACAGTCTAGGAATGGAGTCTCCCACTGCAACTTGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR CCA 90 bp CACGGCCCTGGTAATAGCATGGATAGTGGTTGGCACCAGCGGGAACCGGATGAGTATGGACCTTCTCCTTaGTATGCGGGTAACTGCTGC +
Preference number: 4 (lower is better)
Translates to: HGPGNSMDSGWHQREPDEYGPSP*YAGNCC
Trigger: GCAGCAGTTACCCGCATACCAAGGAGAAGGTCCATA...CTCATCCGGTTCCCGCTGGTGCCAACCACTATCCATGCTATTACCAGGGCCGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
CDS-3UTR CCA 90 bp GCTCCTGATGGCAGATGTAAATTGGGATGTCGCCAGCCTCCGCAGCAGCGGCTGTCCCAAGCATCTTGTTaGAAGGTCTCCAGGGAAAGA +
Preference number: 4 (lower is better)
Translates to: APDGRCKLGCRQPPQQRLSQASC*KVSRER
Trigger: TCTTTCCCTGGAGACCTTCCAACAAGATGCTTGGGA...CAGCCGCTGCTGCGGAGGCTGGCGACATCCCAATTTACATCTGCCATCAGGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
CDS-3UTR CCA 90 bp CCTGGTAATAGCATGGATAGTGGTTGGCACCAGCGGGAACCGGATGAGAAGGCCATGGCAGATGTAAATTaGGATGTCGCCAGCCTCCGC +
Preference number: 4 (lower is better)
Translates to: PGNSMDSGWHQREPDEKAMADVN*DVASLR
Trigger: GCGGAGGCTGGCGACATCCCAATTTACATCTGCCAT...GGCCTTCTCATCCGGTTCCCGCTGGTGCCAACCACTATCCATGCTATTACCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
CDS-3UTR CCA 90 bp GGAGTTCACAAGTTGCAGTGGGAGACTCCATTCCTAGACTGTCTCCCAAAGCAATCAGCGCCCATCTCCTaGGCAGGAGATGTCAGCCGC +
Preference number: 4 (lower is better)
Translates to: GVHKLQWETPFLDCLPKQSAPIS*AGDVSR
Trigger: GCGGCTGACATCTCCTGCCCAGGAGATGGGCGCTGA...TTGCTTTGGGAGACAGTCTAGGAATGGAGTCTCCCACTGCAACTTGTGAACTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR TCA 90 bp CAGCAGTTGTCATTGAAGTACACGGCCCTGGTAATAGCATGGATAGTGGTTGGCCCAGCGGGAACCGGATaGGAAGGCCAGGGAAAGGAA +
Preference number: 4 (lower is better)
Translates to: QQLSLKYTALVIAWIVVGPAGTG*EGQGKE
Trigger: TTCCTTTCCCTGGCCTTCTCATCCGGTTCCCGCTGG...GCCAACCACTATCCATGCTATTACCAGGGCCGTGTACTTCAATGACAACTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
CDS-3UTR CCA 90 bp CACGGCCCTGGTAATAGCATGGATAGTGGTTGGCACCAGCGGGAACCGGATGAGGGTGCGATTGCAATATaGACCTTCTCCTTGGTATGC +
Preference number: 4 (lower is better)
Translates to: HGPGNSMDSGWHQREPDEGAIAI*TFSLVC
Trigger: GCATACCAAGGAGAAGGTCCATATTGCAATCGCACC...CTCATCCGGTTCCCGCTGGTGCCAACCACTATCCATGCTATTACCAGGGCCGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
CDS-3UTR CCA 90 bp AGGATCATGGTGGCCTTCACAGCCTTCAGGTACATGTGGGATTCCGCCTCATGGTTGAATTGGGCCCATTaGCGCTTCACGGTGGTTTGG +
Preference number: 4 (lower is better)
Translates to: RIMVAFTAFRYMWDSASWLNWAH*RFTVVW
Trigger: CCAAACCACCGTGAAGCGCCAATGGGCCCAATTCAA...CCATGAGGCGGAATCCCACATGTACCTGAAGGCTGTGAAGGCCACCATGATCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
CDS-3UTR CCA 90 bp AGGATCATGGTGGCCTTCACAGCCTTCAGGTACATGTGGGATTCCGCCTCATGGCCTCGCCTTGGTTGTTaGCTGGTTCATTCCTCAGCT +
Preference number: 4 (lower is better)
Translates to: RIMVAFTAFRYMWDSASWPRLGC*LVHSSA
Trigger: AGCTGAGGAATGAACCAGCCAACAACCAAGGCGAGG...CCATGAGGCGGAATCCCACATGTACCTGAAGGCTGTGAAGGCCACCATGATCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
CDS-3UTR CCA 90 bp CTTGTTGGAAGGTCTCCAGGGAAAGACGACAAACTGGATTCCCAGCAGGGGCACCCTCGCCTTGGTTGTTaGCTGGTTCATTCCTCAGCT +
Preference number: 4 (lower is better)
Translates to: LVGRSPGKDDKLDSQQGHPRLGC*LVHSSA
Trigger: AGCTGAGGAATGAACCAGCCAACAACCAAGGCGAGG...GTGCCCCTGCTGGGAATCCAGTTTGTCGTCTTTCCCTGGAGACCTTCCAACAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
CDS-3UTR CCA 90 bp ACAACAGCTAGGTCCTGCCCAATGGACAGGCTTGTCCAAAACCAAGCTGAGCATCTGGAATTCTGTCACTaGGCGGCTGGGCACAGCTCA +
Preference number: 4 (lower is better)
Translates to: TTARSCPMDRLVQNQAEHLEFCH*AAGHSS
Trigger: TGAGCTGTGCCCAGCCGCCCAGTGACAGAATTCCAG...ATGCTCAGCTTGGTTTTGGACAAGCCTGTCCATTGGGCAGGACCTAGCTGTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR TCA 90 bp CCTGGGAGGATGGAGAATACTTTAAATGCATGGTCTTTCTCCCAGGAAATGATGATGTCAGCCGCAGGGTaGGGTGCGGACGTGCGCACT +
Preference number: 4 (lower is better)
Translates to: PGRMENTLNAWSFSQEMMMSAAG*GADVRT
Trigger: AGTGCGCACGTCCGCACCTCACCCTGCGGCTGACAT...CATCATTTCCTGGGAGAAAGACCATGCATTTAAAGTATTCTCCATCCTCCCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR GCA 90 bp AGGGAAAGACGACAAACTGGATTCCCAGCAGGGGCACAAGGATCATGGTGGCCTGAAATTGACCACAAGTaGCGCCATGACAGGTCCATG +
Preference number: 4 (lower is better)
Translates to: RERRQTGFPAGAQGSWWPEIDHK*RHDRSM
Trigger: CATGGACCTGTCATGGCGGCACTTGTGGTCAATTTC...AGGCCACCATGATCCTTGTGCCCCTGCTGGGAATCCAGTTTGTCGTCTTTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
CDS-3UTR CCA 90 bp AGGGAAAGACGACAAACTGGATTCCCAGCAGGGGCACAAGGATCATGGTGGCCTTATGGACCTTCTCCTTaGTATGCGGGTAACTGCTGC +
Preference number: 4 (lower is better)
Translates to: RERRQTGFPAGAQGSWWPYGPSP*YAGNCC
Trigger: GCAGCAGTTACCCGCATACCAAGGAGAAGGTCCATA...AGGCCACCATGATCCTTGTGCCCCTGCTGGGAATCCAGTTTGTCGTCTTTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
CDS-3UTR CCA 90 bp CTTGTTGGAAGGTCTCCAGGGAAAGACGACAAACTGGATTCCCAGCAGGGGCACATTGGCGCTTCACGGTaGTTTGGACCTCATTGTTGC +
Preference number: 4 (lower is better)
Translates to: LVGRSPGKDDKLDSQQGHIGASR*FGPHCC
Trigger: GCAACAATGAGGTCCAAACCACCGTGAAGCGCCAAT...GTGCCCCTGCTGGGAATCCAGTTTGTCGTCTTTCCCTGGAGACCTTCCAACAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
CDS-3UTR CCA 90 bp CCTTCACAGCCTTCAGGTACATGTGGGATTCCGCCTCATGGGTTTCCCTCATTTAGCATGGATAGTGGTTaGCACCAGCGGGAACCGGAT +
Preference number: 4 (lower is better)
Translates to: PSQPSGTCGIPPHGFPSFSMDSG*HQREPD
Trigger: ATCCGGTTCCCGCTGGTGCCAACCACTATCCATGCT...AAATGAGGGAAACCCATGAGGCGGAATCCCACATGTACCTGAAGGCTGTGAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
CDS-3UTR CCA 90 bp ACAACAGCTAGGTCCTGCCCAATGGACAGGCTTGTCCAAAACCAAGCTGAGCATTGCAGGGTTACCCTTTaGCAGCCAAGGCTCAATGCC +
Preference number: 4 (lower is better)
Translates to: TTARSCPMDRLVQNQAEHCRVTL*QPRLNA
Trigger: GGCATTGAGCCTTGGCTGCCAAAGGGTAACCCTGCA...ATGCTCAGCTTGGTTTTGGACAAGCCTGTCCATTGGGCAGGACCTAGCTGTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649521.1
CDS-3UTR CCA 90 bp GGAGTTCACAAGTTGCAGTGGGAGACTCCATTCCTAGACTGTCTCCCAAAGCAACTGTCACTGGGCGGCTaGGCACAGCTCAATAGAAGC +
Preference number: 4 (lower is better)
Translates to: GVHKLQWETPFLDCLPKQLSLGG*AQLNRS
Trigger: GCTTCTATTGAGCTGTGCCCAGCCGCCCAGTGACAG...TTGCTTTGGGAGACAGTCTAGGAATGGAGTCTCCCACTGCAACTTGTGAACTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR CCA 90 bp TCACAAGTTGCAGTGGGAGACTCCATTCCTAGACTGTCTCCCAAAGCAACAGTAAGCCCACCCAGACGCTaGTGGGCTGGCTTTCCTAGT +
Preference number: 4 (lower is better)
Translates to: SQVAVGDSIPRLSPKATVSPPRR*WAGFPS
Trigger: ACTAGGAAAGCCAGCCCACCAGCGTCTGGGTGGGCT...TACTGTTGCTTTGGGAGACAGTCTAGGAATGGAGTCTCCCACTGCAACTTGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649521.1
CDS-3UTR TCA 90 bp ACAACAGCTAGGTCCTGCCCAATGGACAGGCTTGTCCAAAACCAAGCTGAGCATCCACAAGTGCCGCCATaGCAGGTCCATGGATTATGT +
Preference number: 4 (lower is better)
Translates to: TTARSCPMDRLVQNQAEHPQVPP*QVHGLC
Trigger: ACATAATCCATGGACCTGTCATGGCGGCACTTGTGG...ATGCTCAGCTTGGTTTTGGACAAGCCTGTCCATTGGGCAGGACCTAGCTGTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR TCA 90 bp CTTGTTGGAAGGTCTCCAGGGAAAGACGACAAACTGGATTCCCAGCAGGGGCACAAGAAGCCCTGGAAATaGATCAGAGAGTGCATCACG +
Preference number: 4 (lower is better)
Translates to: LVGRSPGKDDKLDSQQGHKKPWK*IRECIT
Trigger: CGTGATGCACTCTCTGATTCATTTCCAGGGCTTCTT...GTGCCCCTGCTGGGAATCCAGTTTGTCGTCTTTCCCTGGAGACCTTCCAACAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
CDS-3UTR GCA 90 bp CCTGGTAATAGCATGGATAGTGGTTGGCACCAGCGGGAACCGGATGAGAAGGCCAGAAACATGTTCTTGTaGAGGGTTACCCTTTGGCAG +
Preference number: 4 (lower is better)
Translates to: PGNSMDSGWHQREPDEKARNMFL*RVTLWQ
Trigger: CTGCCAAAGGGTAACCCTGCACAAGAACATGTTTCT...GGCCTTCTCATCCGGTTCCCGCTGGTGCCAACCACTATCCATGCTATTACCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
CDS-3UTR GCA 90 bp GTGGCCTTCACAGCCTTCAGGTACATGTGGGATTCCGCCTCATGGGTTTCCCTCGCATCCAGAAATAGTTaGAGGCCATCATGTACTGGT +
Preference number: 4 (lower is better)
Translates to: VAFTAFRYMWDSASWVSLASRNS*RPSCTG
Trigger: ACCAGTACATGATGGCCTGCAACTATTTCTGGATGC...GAGGGAAACCCATGAGGCGGAATCCCACATGTACCTGAAGGCTGTGAAGGCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
CDS-3UTR GCA 90 bp CAAGGATCATGGTGGCCTTCACAGCCTTCAGGTACATGTGGGATTCCGCCTCATTACCACCGCAAGCGTTaGTTCTCAGTAAACACAGCC +
Preference number: 4 (lower is better)
Translates to: QGSWWPSQPSGTCGIPPHYHRKR*FSVNTA
Trigger: GGCTGTGTTTACTGAGAAGCAACGCTTGCGGTGGTA...ATGAGGCGGAATCCCACATGTACCTGAAGGCTGTGAAGGCCACCATGATCCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
CDS-3UTR CCA 90 bp TCTTGTTGGAAGGTCTCCAGGGAAAGACGACAAACTGGATTCCCAGCAGGGGCAGCACGAGCTCTCCATTaGGTACTACTTCAACCAGGT +
Preference number: 4 (lower is better)
Translates to: SCWKVSRERRQTGFPAGAARALH*VLLQPG
Trigger: ACCTGGTTGAAGTAGTACCCAATGGAGAGCTCGTGC...TGCCCCTGCTGGGAATCCAGTTTGTCGTCTTTCCCTGGAGACCTTCCAACAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
CDS-3UTR CCA 90 bp AGCAAATGGGTTTCCACACTCAGCCAGCAGTTGTCATTGAAGTACACGGCCCTGGCACAAGGATCATGGTaGCCTTCACAGCCTTCAGGT +
Preference number: 4 (lower is better)
Translates to: SKWVSTLSQQLSLKYTALAQGSW*PSQPSG
Trigger: ACCTGAAGGCTGTGAAGGCCACCATGATCCTTGTGC...CAGGGCCGTGTACTTCAATGACAACTGCTGGCTGAGTGTGGAAACCCATTTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
CDS-3UTR CCA 90 bp CCTTCACAGCCTTCAGGTACATGTGGGATTCCGCCTCATGGGTTTCCCTCATTTGGAAAGACGACAAACTaGATTCCCAGCAGGGGCACA +
Preference number: 4 (lower is better)
Translates to: PSQPSGTCGIPPHGFPSFGKTTN*IPSRGT
Trigger: TGTGCCCCTGCTGGGAATCCAGTTTGTCGTCTTTCC...AAATGAGGGAAACCCATGAGGCGGAATCCCACATGTACCTGAAGGCTGTGAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
CDS-3UTR CCA 90 bp TCTTGTTGGAAGGTCTCCAGGGAAAGACGACAAACTGGATTCCCAGCAGGGGCACGCTTCACGGTGGTTTaGACCTCATTGTTGCAGAAG +
Preference number: 4 (lower is better)
Translates to: SCWKVSRERRQTGFPAGARFTVV*TSLLQK
Trigger: CTTCTGCAACAATGAGGTCCAAACCACCGTGAAGCG...TGCCCCTGCTGGGAATCCAGTTTGTCGTCTTTCCCTGGAGACCTTCCAACAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
CDS-3UTR CCA 90 bp AGGTACATGTGGGATTCCGCCTCATGGGTTTCCCTCATTTTGGTCACAAGCACCTTGAATTGGGCCCATTaGCGCTTCACGGTGGTTTGG +
Preference number: 4 (lower is better)
Translates to: RYMWDSASWVSLILVTSTLNWAH*RFTVVW
Trigger: CCAAACCACCGTGAAGCGCCAATGGGCCCAATTCAA...GGTGCTTGTGACCAAAATGAGGGAAACCCATGAGGCGGAATCCCACATGTACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
CDS-3UTR CCA 90 bp GAAGCTGGGTGGAAAGCAGTTAATGGACTTATGTGGAGTCTTTTAATTACCAATCGCGAGCAGAGCGGTTaGAGGGGCGCCTCCCCCAAC +
Preference number: 4 (lower is better)
Translates to: EAGWKAVNGLMWSLLITNREQSG*RGASPN
Trigger: GTTGGGGGAGGCGCCCCTCCAACCGCTCTGCTCGCG...ATTGGTAATTAAAAGACTCCACATAAGTCCATTAACTGCTTTCCACCCAGCTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR CCA 90 bp TCTTTTGCATTCAAAGCATACATCTTCCTGCCAAATGCAGGTCTTTTTCTTCACCGCGAGCAGAGCGGTTaGAGGGGCGCCTCCCCCAAC +
Preference number: 4 (lower is better)
Translates to: SFAFKAYIFLPNAGLFLHREQSG*RGASPN
Trigger: GTTGGGGGAGGCGCCCCTCCAACCGCTCTGCTCGCG...GTGAAGAAAAAGACCTGCATTTGGCAGGAAGATGTATGCTTTGAATGCAAAAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR CCA 90 bp ACAACAGCTAGGTCCTGCCCAATGGACAGGCTTGTCCAAAACCAAGCTGAGCATCCTCGCCTTGGTTGTTaGCTGGTTCATTCCTCAGCT +
Preference number: 4 (lower is better)
Translates to: TTARSCPMDRLVQNQAEHPRLGC*LVHSSA
Trigger: AGCTGAGGAATGAACCAGCCAACAACCAAGGCGAGG...ATGCTCAGCTTGGTTTTGGACAAGCCTGTCCATTGGGCAGGACCTAGCTGTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR TCA 90 bp CCTTCACAGCCTTCAGGTACATGTGGGATTCCGCCTCATGGGTTTCCCTCATTTGGTTCCACTGAATTTTaGATTGGGCCCATTGGCGCT +
Preference number: 4 (lower is better)
Translates to: PSQPSGTCGIPPHGFPSFGSTEF*IGPIGA
Trigger: AGCGCCAATGGGCCCAATTCAAAATTCAGTGGAACC...AAATGAGGGAAACCCATGAGGCGGAATCCCACATGTACCTGAAGGCTGTGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
CDS-3UTR GCA 90 bp ACAACAGCTAGGTCCTGCCCAATGGACAGGCTTGTCCAAAACCAAGCTGAGCATGCCATCCATCCCAGGTaGGATTGCAATATGGACCTT +
Preference number: 4 (lower is better)
Translates to: TTARSCPMDRLVQNQAEHAIHPR*DCNMDL
Trigger: AAGGTCCATATTGCAATCGCACCTGGGATGGATGGC...ATGCTCAGCTTGGTTTTGGACAAGCCTGTCCATTGGGCAGGACCTAGCTGTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR GCA 90 bp CTTGTTGGAAGGTCTCCAGGGAAAGACGACAAACTGGATTCCCAGCAGGGGCACAAAAATGCAAAATCTTaGAGCTCACCGGGTCCCTTC +
Preference number: 4 (lower is better)
Translates to: LVGRSPGKDDKLDSQQGHKNAKS*SSPGPF
Trigger: GAAGGGACCCGGTGAGCTGCAAGATTTTGCATTTTT...GTGCCCCTGCTGGGAATCCAGTTTGTCGTCTTTCCCTGGAGACCTTCCAACAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
CDS-3UTR CCA 90 bp GTGGCCTTCACAGCCTTCAGGTACATGTGGGATTCCGCCTCATGGGTTTCCCTCTACGACGTAAAGAAATaGCTTGGGCTCTATTGTTGG +
Preference number: 4 (lower is better)
Translates to: VAFTAFRYMWDSASWVSLYDVKK*LGLYCW
Trigger: CCAACAATAGAGCCCAAGCCATTTCTTTACGTCGTA...GAGGGAAACCCATGAGGCGGAATCCCACATGTACCTGAAGGCTGTGAAGGCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
CDS-3UTR CCA 90 bp CAGCAGTTGTCATTGAAGTACACGGCCCTGGTAATAGCATGGATAGTGGTTGGCTGCAGGGTTACCCTTTaGCAGCCAAGGCTCCTGAAA +
Preference number: 4 (lower is better)
Translates to: QQLSLKYTALVIAWIVVGCRVTL*QPRLLK
Trigger: TTTCAGGAGCCTTGGCTGCCAAAGGGTAACCCTGCA...GCCAACCACTATCCATGCTATTACCAGGGCCGTGTACTTCAATGACAACTGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415529.2
CDS-3UTR CCA 90 bp GATGGCAGATGTAAATTGGGATGTCGCCAGCCTCCGCAGCAGCGGCTGCAGCGCACTACTTCAACCAGGTaGATGATGATAATCATAGAA +
Preference number: 4 (lower is better)
Translates to: DGRCKLGCRQPPQQRLQRTTSTR*MMIIIE
Trigger: TTCTATGATTATCATCATCCACCTGGTTGAAGTAGT...GCGCTGCAGCCGCTGCTGCGGAGGCTGGCGACATCCCAATTTACATCTGCCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
CDS-3UTR CCA 90 bp TCCACACTCAGCCAGCAGTTGTCATTGAAGTACACGGCCCTGGTAATAGCATGGGGGTTTCCCTCATTTTaGTCACAAGCACCCGGACAA +
Preference number: 4 (lower is better)
Translates to: STLSQQLSLKYTALVIAWGFPSF*SQAPGQ
Trigger: TTGTCCGGGTGCTTGTGACCAAAATGAGGGAAACCC...CCATGCTATTACCAGGGCCGTGTACTTCAATGACAACTGCTGGCTGAGTGTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
CDS-3UTR CCA 90 bp AGGTACATGTGGGATTCCGCCTCATGGGTTTCCCTCATTTTGGTCACAAGCACCTGGGATTCCGCCTCATaGGTTTCCCTCATTTTGGTC +
Preference number: 4 (lower is better)
Translates to: RYMWDSASWVSLILVTSTWDSAS*VSLILV
Trigger: GACCAAAATGAGGGAAACCCATGAGGCGGAATCCCA...GGTGCTTGTGACCAAAATGAGGGAAACCCATGAGGCGGAATCCCACATGTACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
CDS-3UTR CCA 90 bp TCCACACTCAGCCAGCAGTTGTCATTGAAGTACACGGCCCTGGTAATAGCATGGTGGGATTCCGCCTCATaGGTTTCCCTCATTTTGGTC +
Preference number: 4 (lower is better)
Translates to: STLSQQLSLKYTALVIAWWDSAS*VSLILV
Trigger: GACCAAAATGAGGGAAACCCATGAGGCGGAATCCCA...CCATGCTATTACCAGGGCCGTGTACTTCAATGACAACTGCTGGCTGAGTGTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
CDS-3UTR CCA 90 bp CTTCAGGTACATGTGGGATTCCGCCTCATGGGTTTCCCTCATTTTGGTCACAAGGCACAAGGATCATGGTaGCCTTCACAGCCTTCAGGT +
Preference number: 4 (lower is better)
Translates to: LQVHVGFRLMGFPHFGHKAQGSW*PSQPSG
Trigger: ACCTGAAGGCTGTGAAGGCCACCATGATCCTTGTGC...CTTGTGACCAAAATGAGGGAAACCCATGAGGCGGAATCCCACATGTACCTGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
CDS-3UTR CCA 90 bp TTGTCATTGAAGTACACGGCCCTGGTAATAGCATGGATAGTGGTTGGCACCAGCGCACTCTCCTCGCCTTaGTTGTTGGCTGGTTCATTC +
Preference number: 4 (lower is better)
Translates to: LSLKYTALVIAWIVVGTSALSSP*LLAGSF
Trigger: GAATGAACCAGCCAACAACCAAGGCGAGGAGAGTGC...GCTGGTGCCAACCACTATCCATGCTATTACCAGGGCCGTGTACTTCAATGACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
CDS-3UTR CCA 90 bp GTCTTGCAGAGGTCACGTAGTTCATGTGGTTTACATTGTAAGGATGGTAAAACACCACCCAGACGCTGGTaGGCTGGCTTTCCTTCCCGG +
Preference number: 4 (lower is better)
Translates to: VLQRSRSSCGLHCKDGKTPPRRW*AGFPSR
Trigger: CCGGGAAGGAAAGCCAGCCCACCAGCGTCTGGGTGG...TGTTTTACCATCCTTACAATGTAAACCACATGAACTACGTGACCTCTGCAAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426151.7
3UTR CAA 72 bp CCAACGCTGGTTCCACTGAATTTTGAATTGGGCCCATaGGCGCTTCACGGTGGTTTGGACCTCATTGTTGCA +
Preference number: 4 (lower is better)
Translates to: PTLVPLNFELGP*ALHGGLDLIVA
Trigger: TGCAACAATGAGGTCCAAACCACCGTGAAGCGCCAATGGGCCCAATTCAAAATTCAGTGGAACCAGCGTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
CDS-3UTR TCA 90 bp ACAACAGCTAGGTCCTGCCCAATGGACAGGCTTGTCCAAAACCAAGCTGAGCATCAACGCTGGTTCCACTaGATTTTGAATTGGGCCCAT +
Preference number: 4 (lower is better)
Translates to: TTARSCPMDRLVQNQAEHQRWFH*ILNWAH
Trigger: ATGGGCCCAATTCAAAATTCAGTGGAACCAGCGTTG...ATGCTCAGCTTGGTTTTGGACAAGCCTGTCCATTGGGCAGGACCTAGCTGTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR GCA 90 bp GGAGTTCACAAGTTGCAGTGGGAGACTCCATTCCTAGACTGTCTCCCAAAGCAAGAAATTGACCACAAGTaGCGCCATGACAGGTCCATG +
Preference number: 4 (lower is better)
Translates to: GVHKLQWETPFLDCLPKQEIDHK*RHDRSM
Trigger: CATGGACCTGTCATGGCGGCACTTGTGGTCAATTTC...TTGCTTTGGGAGACAGTCTAGGAATGGAGTCTCCCACTGCAACTTGTGAACTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR CCA 90 bp TCACAAGTTGCAGTGGGAGACTCCATTCCTAGACTGTCTCCCAAAGCAACAGTAGGAAAGACGACAAACTaGATTCCCAGCAGGGGCACA +
Preference number: 4 (lower is better)
Translates to: SQVAVGDSIPRLSPKATVGKTTN*IPSRGT
Trigger: TGTGCCCCTGCTGGGAATCCAGTTTGTCGTCTTTCC...TACTGTTGCTTTGGGAGACAGTCTAGGAATGGAGTCTCCCACTGCAACTTGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR CCA 90 bp TTGTCATTGAAGTACACGGCCCTGGTAATAGCATGGATAGTGGTTGGCACCAGCCGCTTCACGGTGGTTTaGACCTCATTGTTGCAGAAG +
Preference number: 4 (lower is better)
Translates to: LSLKYTALVIAWIVVGTSRFTVV*TSLLQK
Trigger: CTTCTGCAACAATGAGGTCCAAACCACCGTGAAGCG...GCTGGTGCCAACCACTATCCATGCTATTACCAGGGCCGTGTACTTCAATGACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
CDS-3UTR CCA 90 bp TCACAAGTTGCAGTGGGAGACTCCATTCCTAGACTGTCTCCCAAAGCAACAGTAGCACTCTCCTCGCCTTaGTTGTTGGCTGGTTCATTC +
Preference number: 4 (lower is better)
Translates to: SQVAVGDSIPRLSPKATVALSSP*LLAGSF
Trigger: GAATGAACCAGCCAACAACCAAGGCGAGGAGAGTGC...TACTGTTGCTTTGGGAGACAGTCTAGGAATGGAGTCTCCCACTGCAACTTGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR CCA 90 bp GAAGCTGGGTGGAAAGCAGTTAATGGACTTATGTGGAGTCTTTTAATTACCAATCAGACGCTGGTGGGCTaGCTTTCCTTCCCGGCGCCT +
Preference number: 4 (lower is better)
Translates to: EAGWKAVNGLMWSLLITNQTLVG*LSFPAP
Trigger: AGGCGCCGGGAAGGAAAGCCAGCCCACCAGCGTCTG...ATTGGTAATTAAAAGACTCCACATAAGTCCATTAACTGCTTTCCACCCAGCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426151.7
3UTR CAA 72 bp GATATTCAAAGGGATGATCTCAGCACTCTCCTCGCCTaGGTTGTTGGCTGGTTCATTCCTCAGCTCCTGATG +
Preference number: 4 (lower is better)
Translates to: DIQRDDLSTLLA*VVGWFIPQLLM
Trigger: CATCAGGAGCTGAGGAATGAACCAGCCAACAACCAAGGCGAGGAGAGTGCTGAGATCATCCCTTTGAATATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
CDS-3UTR TCA 90 bp CTTGTTGGAAGGTCTCCAGGGAAAGACGACAAACTGGATTCCCAGCAGGGGCACGGGAAATCACTAGGGTaGAAATTGACAAAGAATGAC +
Preference number: 4 (lower is better)
Translates to: LVGRSPGKDDKLDSQQGHGKSLG*KLTKND
Trigger: GTCATTCTTTGTCAATTTTCACCCTAGTGATTTCCC...GTGCCCCTGCTGGGAATCCAGTTTGTCGTCTTTCCCTGGAGACCTTCCAACAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
CDS-3UTR TCA 90 bp TCCACACTCAGCCAGCAGTTGTCATTGAAGTACACGGCCCTGGTAATAGCATGGACACAGCCACGACAATaGGTGTATGAAGATAGATCC +
Preference number: 4 (lower is better)
Translates to: STLSQQLSLKYTALVIAWTQPRQ*VYEDRS
Trigger: GGATCTATCTTCATACACTCATTGTCGTGGCTGTGT...CCATGCTATTACCAGGGCCGTGTACTTCAATGACAACTGCTGGCTGAGTGTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
CDS-3UTR TCA 90 bp CTTCAGGTACATGTGGGATTCCGCCTCATGGGTTTCCCTCATTTTGGTCACAAGCAACGCTGGTTCCACTaGATTTTGAATTGGGCCCAT +
Preference number: 4 (lower is better)
Translates to: LQVHVGFRLMGFPHFGHKQRWFH*ILNWAH
Trigger: ATGGGCCCAATTCAAAATTCAGTGGAACCAGCGTTG...CTTGTGACCAAAATGAGGGAAACCCATGAGGCGGAATCCCACATGTACCTGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
CDS-3UTR GCA 90 bp CTTCAGGTACATGTGGGATTCCGCCTCATGGGTTTCCCTCATTTTGGTCACAAGCATCCCAGGTGCGATTaGAATATGGACCTTCTCCTT +
Preference number: 4 (lower is better)
Translates to: LQVHVGFRLMGFPHFGHKHPRCD*NMDLLL
Trigger: AAGGAGAAGGTCCATATTGCAATCGCACCTGGGATG...CTTGTGACCAAAATGAGGGAAACCCATGAGGCGGAATCCCACATGTACCTGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
CDS-3UTR GCA 90 bp CCTTCACAGCCTTCAGGTACATGTGGGATTCCGCCTCATGGGTTTCCCTCATTTAGAAACATGTTCTTGTaGAGGGTTACCCTTTGGCAG +
Preference number: 4 (lower is better)
Translates to: PSQPSGTCGIPPHGFPSFRNMFL*RVTLWQ
Trigger: CTGCCAAAGGGTAACCCTGCACAAGAACATGTTTCT...AAATGAGGGAAACCCATGAGGCGGAATCCCACATGTACCTGAAGGCTGTGAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
CDS-3UTR GCA 90 bp ACAACAGCTAGGTCCTGCCCAATGGACAGGCTTGTCCAAAACCAAGCTGAGCATAAAAATGCAAAATCTTaGAGCTCACCGGGTCCCTTC +
Preference number: 4 (lower is better)
Translates to: TTARSCPMDRLVQNQAEHKNAKS*SSPGPF
Trigger: GAAGGGACCCGGTGAGCTGCAAGATTTTGCATTTTT...ATGCTCAGCTTGGTTTTGGACAAGCCTGTCCATTGGGCAGGACCTAGCTGTTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR GCA 90 bp CCTTCACAGCCTTCAGGTACATGTGGGATTCCGCCTCATGGGTTTCCCTCATTTTTTGGACCTCATTGTTaGAGAAGCAGTAGATGGTCG +
Preference number: 4 (lower is better)
Translates to: PSQPSGTCGIPPHGFPSFFGPHC*RSSRWS
Trigger: CGACCATCTACTGCTTCTGCAACAATGAGGTCCAAA...AAATGAGGGAAACCCATGAGGCGGAATCCCACATGTACCTGAAGGCTGTGAAGG
49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
CDS-3UTR GCA 90 bp TTTCTTTTGCATTCAAAGCATACATCTTCCTGCCAAATGCAGGTCTTTTTCTTCGGTGAGGTGCGGACGTaGGCACTTCTCCAACCCGGG +
Preference number: 4 (lower is better)
Translates to: FLLHSKHTSSCQMQVFFFGEVRT*ALLQPG
Trigger: CCCGGGTTGGAGAAGTGCGCACGTCCGCACCTCACC...GAAGAAAAAGACCTGCATTTGGCAGGAAGATGTATGCTTTGAATGCAAAAGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR CCA 90 bp TCACAAGTTGCAGTGGGAGACTCCATTCCTAGACTGTCTCCCAAAGCAACAGTATATGGACCTTCTCCTTaGTATGCGGGTAACTGCTGC +
Preference number: 4 (lower is better)
Translates to: SQVAVGDSIPRLSPKATVYGPSP*YAGNCC
Trigger: GCAGCAGTTACCCGCATACCAAGGAGAAGGTCCATA...TACTGTTGCTTTGGGAGACAGTCTAGGAATGGAGTCTCCCACTGCAACTTGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR CCA 90 bp CTTGTTGGAAGGTCTCCAGGGAAAGACGACAAACTGGATTCCCAGCAGGGGCACATCCGGAAAATAATCTaGGCAGAACTGATAGGACAA +
Preference number: 4 (lower is better)
Translates to: LVGRSPGKDDKLDSQQGHIRKII*AELIGQ
Trigger: TTGTCCTATCAGTTCTGCCCAGATTATTTTCCGGAT...GTGCCCCTGCTGGGAATCCAGTTTGTCGTCTTTCCCTGGAGACCTTCCAACAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
CDS-3UTR CCA 90 bp TCACAAGTTGCAGTGGGAGACTCCATTCCTAGACTGTCTCCCAAAGCAACAGTAGGGTTTCCCTCATTTTaGTCACAAGCACCCGGACAA +
Preference number: 4 (lower is better)
Translates to: SQVAVGDSIPRLSPKATVGFPSF*SQAPGQ
Trigger: TTGTCCGGGTGCTTGTGACCAAAATGAGGGAAACCC...TACTGTTGCTTTGGGAGACAGTCTAGGAATGGAGTCTCCCACTGCAACTTGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR CCA 90 bp AGCAAAAAGAAGAAATTGACCACAAGTGCCGCCATGACAGGTCCATGGATTATGTGCAGGGTTACCCTTTaGCAGCCAAGGCTCAATGCC +
Preference number: 4 (lower is better)
Translates to: SKKKKLTTSAAMTGPWIMCRVTL*QPRLNA
Trigger: GGCATTGAGCCTTGGCTGCCAAAGGGTAACCCTGCA...CATAATCCATGGACCTGTCATGGCGGCACTTGTGGTCAATTTCTTCTTTTTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423724.5
CDS-3UTR CCA 90 bp TCTTTTGCATTCAAAGCATACATCTTCCTGCCAAATGCAGGTCTTTTTCTTCACAGCCCACCCAGACGCTaGTGGGCTGGCTTTCCTTCC +
Preference number: 4 (lower is better)
Translates to: SFAFKAYIFLPNAGLFLHSPPRR*WAGFPS
Trigger: GGAAGGAAAGCCAGCCCACCAGCGTCTGGGTGGGCT...GTGAAGAAAAAGACCTGCATTTGGCAGGAAGATGTATGCTTTGAATGCAAAAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426151.7
CDS-3UTR CCA 90 bp GAAGCTGGGTGGAAAGCAGTTAATGGACTTATGTGGAGTCTTTTAATTACCAATTCAGCGCCCATCTCCTaGGCAGGAGATGTCAGCCGC +
Preference number: 4 (lower is better)
Translates to: EAGWKAVNGLMWSLLITNSAPIS*AGDVSR
Trigger: GCGGCTGACATCTCCTGCCCAGGAGATGGGCGCTGA...ATTGGTAATTAAAAGACTCCACATAAGTCCATTAACTGCTTTCCACCCAGCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR CCA 90 bp TTTCTTTTGCATTCAAAGCATACATCTTCCTGCCAAATGCAGGTCTTTTTCTTCGGGTGTTCGCAGGTGTaGCTCCAGGGACTCAGGCGC +
Preference number: 4 (lower is better)
Translates to: FLLHSKHTSSCQMQVFFFGCSQV*LQGLRR
Trigger: GCGCCTGAGTCCCTGGAGCCACACCTGCGAACACCC...GAAGAAAAAGACCTGCATTTGGCAGGAAGATGTATGCTTTGAATGCAAAAGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR CCA 90 bp TCACAAGTTGCAGTGGGAGACTCCATTCCTAGACTGTCTCCCAAAGCAACAGTACAGAAAATTGCATCCTaGGGTGGCAAAAGTGGGTGG +
Preference number: 4 (lower is better)
Translates to: SQVAVGDSIPRLSPKATVQKIAS*GGKSGW
Trigger: CCACCCACTTTTGCCACCCCAGGATGCAATTTTCTG...TACTGTTGCTTTGGGAGACAGTCTAGGAATGGAGTCTCCCACTGCAACTTGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649521.1
3UTR CAA 72 bp TACATGTGGGATTCCGCCTCATGGGTTTCCCTCATTTaGGTCACAAGCACCCGGACAATGTTGAGCAAAAAG +
Preference number: 4 (lower is better)
Translates to: YMWDSASWVSLI*VTSTRTMLSKK
Trigger: CTTTTTGCTCAACATTGTCCGGGTGCTTGTGACCAAAATGAGGGAAACCCATGAGGCGGAATCCCACATGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
CDS-3UTR TCA 90 bp CTTCAGGTACATGTGGGATTCCGCCTCATGGGTTTCCCTCATTTTGGTCACAAGACACAGCCACGACAATaGGTGTATGAAGATAGATCC +
Preference number: 4 (lower is better)
Translates to: LQVHVGFRLMGFPHFGHKTQPRQ*VYEDRS
Trigger: GGATCTATCTTCATACACTCATTGTCGTGGCTGTGT...CTTGTGACCAAAATGAGGGAAACCCATGAGGCGGAATCCCACATGTACCTGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
CDS-3UTR TCA 90 bp GGAGTTCACAAGTTGCAGTGGGAGACTCCATTCCTAGACTGTCTCCCAAAGCAACGGTCAACCACAAGTTaGTTTCTAATTAGCCCTCCT +
Preference number: 4 (lower is better)
Translates to: GVHKLQWETPFLDCLPKQRSTTS*FLISPP
Trigger: AGGAGGGCTAATTAGAAATCAACTTGTGGTTGACCG...TTGCTTTGGGAGACAGTCTAGGAATGGAGTCTCCCACTGCAACTTGTGAACTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR GCA 90 bp GCAGATGACTCTTGCTCTATGATATTCAAAGGGATGATCTCAGCACTCTCCTCGGAAATTGACCACAAGTaGCGCCATGACAGGTCCATG +
Preference number: 4 (lower is better)
Translates to: ADDSCSMIFKGMISALSSEIDHK*RHDRSM
Trigger: CATGGACCTGTCATGGCGGCACTTGTGGTCAATTTC...CGAGGAGAGTGCTGAGATCATCCCTTTGAATATCATAGAGCAAGAGTCATCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
CDS-3UTR GCA 90 bp TCTTGTTGGAAGGTCTCCAGGGAAAGACGACAAACTGGATTCCCAGCAGGGGCACAAGCAGATGACTCTTaGTCTATGATATTCAAAGGG +
Preference number: 4 (lower is better)
Translates to: SCWKVSRERRQTGFPAGAQADDS*SMIFKG
Trigger: CCCTTTGAATATCATAGAGCAAGAGTCATCTGCTTG...TGCCCCTGCTGGGAATCCAGTTTGTCGTCTTTCCCTGGAGACCTTCCAACAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
CDS-3UTR GCA 90 bp ACAACAGCTAGGTCCTGCCCAATGGACAGGCTTGTCCAAAACCAAGCTGAGCATTCACGATGCTGTGTTTaGTTCACATTCAAGCAGATG +
Preference number: 4 (lower is better)
Translates to: TTARSCPMDRLVQNQAEHSRCCV*FTFKQM
Trigger: CATCTGCTTGAATGTGAAGCAAACACAGCATCGTGA...ATGCTCAGCTTGGTTTTGGACAAGCCTGTCCATTGGGCAGGACCTAGCTGTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR CCA 90 bp CCTTCACAGCCTTCAGGTACATGTGGGATTCCGCCTCATGGGTTTCCCTCATTTCGTAAAGAAATGGCTTaGGCTCTATTGTTGGATAGG +
Preference number: 4 (lower is better)
Translates to: PSQPSGTCGIPPHGFPSFRKEMA*ALLLDR
Trigger: CCTATCCAACAATAGAGCCCAAGCCATTTCTTTACG...AAATGAGGGAAACCCATGAGGCGGAATCCCACATGTACCTGAAGGCTGTGAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
CDS-3UTR CCA 90 bp TCACAAGTTGCAGTGGGAGACTCCATTCCTAGACTGTCTCCCAAAGCAACAGTAGGTGCGATTGCAATATaGACCTTCTCCTTGGTATGC +
Preference number: 4 (lower is better)
Translates to: SQVAVGDSIPRLSPKATVGAIAI*TFSLVC
Trigger: GCATACCAAGGAGAAGGTCCATATTGCAATCGCACC...TACTGTTGCTTTGGGAGACAGTCTAGGAATGGAGTCTCCCACTGCAACTTGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR CCA 90 bp GTCTTGCAGAGGTCACGTAGTTCATGTGGTTTACATTGTAAGGATGGTAAAACAAGCATGGATAGTGGTTaGCACCAGCGGGAACCCCCA +
Preference number: 4 (lower is better)
Translates to: VLQRSRSSCGLHCKDGKTSMDSG*HQREPP
Trigger: TGGGGGTTCCCGCTGGTGCCAACCACTATCCATGCT...TGTTTTACCATCCTTACAATGTAAACCACATGAACTACGTGACCTCTGCAAGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR CCA 90 bp CCTGGGAGGATGGAGAATACTTTAAATGCATGGTCTTTCTCCCAGGAAATGATGGCCTTCAGGTACATGTaGGATTCCGCCTCATGGGTT +
Preference number: 4 (lower is better)
Translates to: PGRMENTLNAWSFSQEMMAFRYM*DSASWV
Trigger: AACCCATGAGGCGGAATCCCACATGTACCTGAAGGC...CATCATTTCCTGGGAGAAAGACCATGCATTTAAAGTATTCTCCATCCTCCCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR CCA 90 bp TCACAAGTTGCAGTGGGAGACTCCATTCCTAGACTGTCTCCCAAAGCAACAGTATCCCAAGCATCTTGTTaGAAGGTCTCCAGGGAAAGA +
Preference number: 4 (lower is better)
Translates to: SQVAVGDSIPRLSPKATVSQASC*KVSRER
Trigger: TCTTTCCCTGGAGACCTTCCAACAAGATGCTTGGGA...TACTGTTGCTTTGGGAGACAGTCTAGGAATGGAGTCTCCCACTGCAACTTGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR CCA 90 bp CCTGGGAGGATGGAGAATACTTTAAATGCATGGTCTTTCTCCCAGGAAATGATGATGGCAGATGTAAATTaGGATGTCGCCAGCCTCCGC +
Preference number: 4 (lower is better)
Translates to: PGRMENTLNAWSFSQEMMMADVN*DVASLR
Trigger: GCGGAGGCTGGCGACATCCCAATTTACATCTGCCAT...CATCATTTCCTGGGAGAAAGACCATGCATTTAAAGTATTCTCCATCCTCCCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR CCA 90 bp TGGTCGCAACAAAGAAGCCCTGGAAATGAATCAGAGAGTGCATCACGTAATCATGCCTTGGTTGTTGGCTaGTTCATTCCTCAGCTCCTG +
Preference number: 4 (lower is better)
Translates to: WSQQRSPGNESESASRNHALVVG*FIPQLL
Trigger: CAGGAGCTGAGGAATGAACCAGCCAACAACCAAGGC...ATGATTACGTGATGCACTCTCTGATTCATTTCCAGGGCTTCTTTGTTGCGACCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
CDS-3UTR CCA 90 bp ACAACAGCTAGGTCCTGCCCAATGGACAGGCTTGTCCAAAACCAAGCTGAGCATAGCTTTGAAGCTGGGTaGAAAGCAGTTAATGGACTT +
Preference number: 4 (lower is better)
Translates to: TTARSCPMDRLVQNQAEHSFEAG*KAVNGL
Trigger: AAGTCCATTAACTGCTTTCCACCCAGCTTCAAAGCT...ATGCTCAGCTTGGTTTTGGACAAGCCTGTCCATTGGGCAGGACCTAGCTGTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR CCA 90 bp GGAGTTCACAAGTTGCAGTGGGAGACTCCATTCCTAGACTGTCTCCCAAAGCAAGGTGGCAAAAGTGGGTaGATCAGTGGGAATCATTTA +
Preference number: 4 (lower is better)
Translates to: GVHKLQWETPFLDCLPKQGGKSG*ISGNHL
Trigger: TAAATGATTCCCACTGATCCACCCACTTTTGCCACC...TTGCTTTGGGAGACAGTCTAGGAATGGAGTCTCCCACTGCAACTTGTGAACTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649521.1
CDS-3UTR GCA 90 bp GGGAAAGACGACAAACTGGATTCCCAGCAGGGGCACAAGGATCATGGTGGCCTTATAGTACAGAACATATaGATTCTTCAGTTTCTCAGG +
Preference number: 4 (lower is better)
Translates to: GKDDKLDSQQGHKDHGGLIVQNI*ILQFLR
Trigger: CCTGAGAAACTGAAGAATGCATATGTTCTGTACTAT...AAGGCCACCATGATCCTTGTGCCCCTGCTGGGAATCCAGTTTGTCGTCTTTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
CDS-3UTR GCA 90 bp TCACAAGTTGCAGTGGGAGACTCCATTCCTAGACTGTCTCCCAAAGCAACAGTAAGAAACATGTTCTTGTaGAGGGTTACCCTTTGGCAG +
Preference number: 4 (lower is better)
Translates to: SQVAVGDSIPRLSPKATVRNMFL*RVTLWQ
Trigger: CTGCCAAAGGGTAACCCTGCACAAGAACATGTTTCT...TACTGTTGCTTTGGGAGACAGTCTAGGAATGGAGTCTCCCACTGCAACTTGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR GCA 90 bp TCACAAGTTGCAGTGGGAGACTCCATTCCTAGACTGTCTCCCAAAGCAACAGTAGCATCCAGAAATAGTTaGAGGCCATCATGTACTGGT +
Preference number: 4 (lower is better)
Translates to: SQVAVGDSIPRLSPKATVASRNS*RPSCTG
Trigger: ACCAGTACATGATGGCCTGCAACTATTTCTGGATGC...TACTGTTGCTTTGGGAGACAGTCTAGGAATGGAGTCTCCCACTGCAACTTGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR GCA 90 bp TGGTCGCAACAAAGAAGCCCTGGAAATGAATCAGAGAGTGCATCACGTAATCATTACCACCGCAAGCGTTaGTTCTCAGTAAACACAGCC +
Preference number: 4 (lower is better)
Translates to: WSQQRSPGNESESASRNHYHRKR*FSVNTA
Trigger: GGCTGTGTTTACTGAGAAGCAACGCTTGCGGTGGTA...ATGATTACGTGATGCACTCTCTGATTCATTTCCAGGGCTTCTTTGTTGCGACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
CDS-3UTR GCA 90 bp TCACAAGTTGCAGTGGGAGACTCCATTCCTAGACTGTCTCCCAAAGCAACAGTATTTGGACCTCATTGTTaGAGAAGCAGTAGATGGTCG +
Preference number: 4 (lower is better)
Translates to: SQVAVGDSIPRLSPKATVFGPHC*RSSRWS
Trigger: CGACCATCTACTGCTTCTGCAACAATGAGGTCCAAA...TACTGTTGCTTTGGGAGACAGTCTAGGAATGGAGTCTCCCACTGCAACTTGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR GCA 90 bp ACAACAGCTAGGTCCTGCCCAATGGACAGGCTTGTCCAAAACCAAGCTGAGCATGGAGAATACTTTAAATaGATGGTCTTTCTCCCAGGA +
Preference number: 4 (lower is better)
Translates to: TTARSCPMDRLVQNQAEHGEYFK*MVFLPG
Trigger: TCCTGGGAGAAAGACCATGCATTTAAAGTATTCTCC...ATGCTCAGCTTGGTTTTGGACAAGCCTGTCCATTGGGCAGGACCTAGCTGTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR GCA 90 bp ACAACAGCTAGGTCCTGCCCAATGGACAGGCTTGTCCAAAACCAAGCTGAGCATGGGCAAGAGGTAATCTaGTTTATAAACCTTGGAGTA +
Preference number: 4 (lower is better)
Translates to: TTARSCPMDRLVQNQAEHGQEVI*FINLGV
Trigger: TACTCCAAGGTTTATAAAGCAGATTACCTCTTGCCC...ATGCTCAGCTTGGTTTTGGACAAGCCTGTCCATTGGGCAGGACCTAGCTGTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR GCA 90 bp ACAACAGCTAGGTCCTGCCCAATGGACAGGCTTGTCCAAAACCAAGCTGAGCATCATTTGTACCACAGCTaGCAGAAATACTCTGTTTTC +
Preference number: 4 (lower is better)
Translates to: TTARSCPMDRLVQNQAEHHLYHS*QKYSVF
Trigger: GAAAACAGAGTATTTCTGGCAGCTGTGGTACAAATG...ATGCTCAGCTTGGTTTTGGACAAGCCTGTCCATTGGGCAGGACCTAGCTGTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR CCA 90 bp TCAGGTACATGTGGGATTCCGCCTCATGGGTTTCCCTCATTTTGGTCACAAGCACGTAAAGAAATGGCTTaGGCTCTATTGTTGGATAGG +
Preference number: 4 (lower is better)
Translates to: SGTCGIPPHGFPSFWSQARKEMA*ALLLDR
Trigger: CCTATCCAACAATAGAGCCCAAGCCATTTCTTTACG...TGCTTGTGACCAAAATGAGGGAAACCCATGAGGCGGAATCCCACATGTACCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
CDS-3UTR CCA 90 bp TCTTTTGCATTCAAAGCATACATCTTCCTGCCAAATGCAGGTCTTTTTCTTCACAGCATGGATAGTGGTTaGCACCAGCGGGAACCCCCA +
Preference number: 4 (lower is better)
Translates to: SFAFKAYIFLPNAGLFLHSMDSG*HQREPP
Trigger: TGGGGGTTCCCGCTGGTGCCAACCACTATCCATGCT...GTGAAGAAAAAGACCTGCATTTGGCAGGAAGATGTATGCTTTGAATGCAAAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR CCA 90 bp CCTGGGAGGATGGAGAATACTTTAAATGCATGGTCTTTCTCCCAGGAAATGATGCGCTTCACGGTGGTTTaGACCTCATTGTTGCAGAAG +
Preference number: 4 (lower is better)
Translates to: PGRMENTLNAWSFSQEMMRFTVV*TSLLQK
Trigger: CTTCTGCAACAATGAGGTCCAAACCACCGTGAAGCG...CATCATTTCCTGGGAGAAAGACCATGCATTTAAAGTATTCTCCATCCTCCCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR CCA 90 bp CCTGGGAGGATGGAGAATACTTTAAATGCATGGTCTTTCTCCCAGGAAATGATGATTGGCGCTTCACGGTaGTTTGGACCTCATTGTTGC +
Preference number: 4 (lower is better)
Translates to: PGRMENTLNAWSFSQEMMIGASR*FGPHCC
Trigger: GCAACAATGAGGTCCAAACCACCGTGAAGCGCCAAT...CATCATTTCCTGGGAGAAAGACCATGCATTTAAAGTATTCTCCATCCTCCCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR CCA 90 bp CAGAGAGTGCATCACGTAATCATATATCTTCCCAAGCATCTTGTTGGAAGGTCTATGGCAGATGTAAATTaGGATGTCGCCAGCCTCCGC +
Preference number: 4 (lower is better)
Translates to: QRVHHVIIYLPKHLVGRSMADVN*DVASLR
Trigger: GCGGAGGCTGGCGACATCCCAATTTACATCTGCCAT...AGACCTTCCAACAAGATGCTTGGGAAGATATATGATTACGTGATGCACTCTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
CDS-3UTR CCA 90 bp ACATATTTACTAATCTCTCTATTAGAAAGCCGCTTTGTCTTGCAGAGGTCACGTCTGGAATTCTGTCACTaGGCGGCTGGGCACAGCTCA +
Preference number: 4 (lower is better)
Translates to: TYLLISLLESRFVLQRSRLEFCH*AAGHSS
Trigger: TGAGCTGTGCCCAGCCGCCCAGTGACAGAATTCCAG...ACGTGACCTCTGCAAGACAAAGCGGCTTTCTAATAGAGAGATTAGTAAATATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR CCA 90 bp GAAGCTGGGTGGAAAGCAGTTAATGGACTTATGTGGAGTCTTTTAATTACCAATCCACCCAGACGCTGGTaGGCTGGCTTTCCTAGTTTG +
Preference number: 4 (lower is better)
Translates to: EAGWKAVNGLMWSLLITNPPRRW*AGFPSL
Trigger: CAAACTAGGAAAGCCAGCCCACCAGCGTCTGGGTGG...ATTGGTAATTAAAAGACTCCACATAAGTCCATTAACTGCTTTCCACCCAGCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649521.1
CDS-3UTR TCA 90 bp TTGTCATTGAAGTACACGGCCCTGGTAATAGCATGGATAGTGGTTGGCACCAGCAGAATTGGGGTTGGGTaGTTTAGAAGAAGAAACAGT +
Preference number: 4 (lower is better)
Translates to: LSLKYTALVIAWIVVGTSRIGVG*FRRRNS
Trigger: ACTGTTTCTTCTTCTAAATCACCCAACCCCAATTCT...GCTGGTGCCAACCACTATCCATGCTATTACCAGGGCCGTGTACTTCAATGACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
CDS-3UTR TCA 90 bp GGAGTTCACAAGTTGCAGTGGGAGACTCCATTCCTAGACTGTCTCCCAAAGCAAAGAATTGGGGTTGGGTaGTTTAGAAGAAGAAACAGT +
Preference number: 4 (lower is better)
Translates to: GVHKLQWETPFLDCLPKQRIGVG*FRRRNS
Trigger: ACTGTTTCTTCTTCTAAATCACCCAACCCCAATTCT...TTGCTTTGGGAGACAGTCTAGGAATGGAGTCTCCCACTGCAACTTGTGAACTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR TCA 90 bp CCTGGGAGGATGGAGAATACTTTAAATGCATGGTCTTTCTCCCAGGAAATGATGAAGAAGCCCTGGAAATaGATCAGAGAGTGCATCACG +
Preference number: 4 (lower is better)
Translates to: PGRMENTLNAWSFSQEMMKKPWK*IRECIT
Trigger: CGTGATGCACTCTCTGATTCATTTCCAGGGCTTCTT...CATCATTTCCTGGGAGAAAGACCATGCATTTAAAGTATTCTCCATCCTCCCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR TCA 90 bp CCTGGGAGGATGGAGAATACTTTAAATGCATGGTCTTTCTCCCAGGAAATGATGGAAATGATGGCTCAGTaGTCACGATGCTGTGTTTGC +
Preference number: 4 (lower is better)
Translates to: PGRMENTLNAWSFSQEMMEMMAQ*SRCCVC
Trigger: GCAAACACAGCATCGTGATCACTGAGCCATCATTTC...CATCATTTCCTGGGAGAAAGACCATGCATTTAAAGTATTCTCCATCCTCCCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR GCA 90 bp GGAGTTCACAAGTTGCAGTGGGAGACTCCATTCCTAGACTGTCTCCCAAAGCAACAAGCAGATGACTCTTaGTCTATGATATTCAAAGGG +
Preference number: 4 (lower is better)
Translates to: GVHKLQWETPFLDCLPKQQADDS*SMIFKG
Trigger: CCCTTTGAATATCATAGAGCAAGAGTCATCTGCTTG...TTGCTTTGGGAGACAGTCTAGGAATGGAGTCTCCCACTGCAACTTGTGAACTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR CCA 90 bp CAGAGAGTGCATCACGTAATCATATATCTTCCCAAGCATCTTGTTGGAAGGTCTGGGTTTCCCTCATTTTaGTCACAAGCACCCGGACAA +
Preference number: 4 (lower is better)
Translates to: QRVHHVIIYLPKHLVGRSGFPSF*SQAPGQ
Trigger: TTGTCCGGGTGCTTGTGACCAAAATGAGGGAAACCC...AGACCTTCCAACAAGATGCTTGGGAAGATATATGATTACGTGATGCACTCTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
CDS-3UTR CCA 90 bp GTCTTGCAGAGGTCACGTAGTTCATGTGGTTTACATTGTAAGGATGGTAAAACAGCACAAGGATCATGGTaGCCTTCACAGCCTTCAGGT +
Preference number: 4 (lower is better)
Translates to: VLQRSRSSCGLHCKDGKTAQGSW*PSQPSG
Trigger: ACCTGAAGGCTGTGAAGGCCACCATGATCCTTGTGC...TGTTTTACCATCCTTACAATGTAAACCACATGAACTACGTGACCTCTGCAAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR CCA 90 bp GTCTTGCAGAGGTCACGTAGTTCATGTGGTTTACATTGTAAGGATGGTAAAACAGGAAAGACGACAAACTaGATTCCCAGCAGGGGCACA +
Preference number: 4 (lower is better)
Translates to: VLQRSRSSCGLHCKDGKTGKTTN*IPSRGT
Trigger: TGTGCCCCTGCTGGGAATCCAGTTTGTCGTCTTTCC...TGTTTTACCATCCTTACAATGTAAACCACATGAACTACGTGACCTCTGCAAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR CCA 90 bp TATGTAAAGCAAATGGGTTTCCACACTCAGCCAGCAGTTGTCATTGAAGTACACATTGGCGCTTCACGGTaGTTTGGACCTCATTGTTGC +
Preference number: 4 (lower is better)
Translates to: YVKQMGFHTQPAVVIEVHIGASR*FGPHCC
Trigger: GCAACAATGAGGTCCAAACCACCGTGAAGCGCCAAT...GTGTACTTCAATGACAACTGCTGGCTGAGTGTGGAAACCCATTTGCTTTACATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
CDS-3UTR CCA 90 bp GTCTTGCAGAGGTCACGTAGTTCATGTGGTTTACATTGTAAGGATGGTAAAACAATGGCAGATGTAAATTaGGATGTCGCCAGCCTCCGC +
Preference number: 4 (lower is better)
Translates to: VLQRSRSSCGLHCKDGKTMADVN*DVASLR
Trigger: GCGGAGGCTGGCGACATCCCAATTTACATCTGCCAT...TGTTTTACCATCCTTACAATGTAAACCACATGAACTACGTGACCTCTGCAAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR CCA 90 bp GTCTTGCAGAGGTCACGTAGTTCATGTGGTTTACATTGTAAGGATGGTAAAACACCTCGCCTTGGTTGTTaGCTGGTTCATTCCTCAGCT +
Preference number: 4 (lower is better)
Translates to: VLQRSRSSCGLHCKDGKTPRLGC*LVHSSA
Trigger: AGCTGAGGAATGAACCAGCCAACAACCAAGGCGAGG...TGTTTTACCATCCTTACAATGTAAACCACATGAACTACGTGACCTCTGCAAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR CCA 90 bp TTTCTTTTGCATTCAAAGCATACATCTTCCTGCCAAATGCAGGTCTTTTTCTTCCTGTCACTGGGCGGCTaGGCACAGCTCAATAGAAGC +
Preference number: 4 (lower is better)
Translates to: FLLHSKHTSSCQMQVFFFLSLGG*AQLNRS
Trigger: GCTTCTATTGAGCTGTGCCCAGCCGCCCAGTGACAG...GAAGAAAAAGACCTGCATTTGGCAGGAAGATGTATGCTTTGAATGCAAAAGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR TCA 90 bp TCACAAGTTGCAGTGGGAGACTCCATTCCTAGACTGTCTCCCAAAGCAACAGTAAGAATTGGGGTTGGGTaGTTTAGAAGAAGAAACAGT +
Preference number: 4 (lower is better)
Translates to: SQVAVGDSIPRLSPKATVRIGVG*FRRRNS
Trigger: ACTGTTTCTTCTTCTAAATCACCCAACCCCAATTCT...TACTGTTGCTTTGGGAGACAGTCTAGGAATGGAGTCTCCCACTGCAACTTGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR TCA 90 bp TCTTTTGCATTCAAAGCATACATCTTCCTGCCAAATGCAGGTCTTTTTCTTCACCCACAAGTGCCGCCATaGCAGGTCCATGGATTATGT +
Preference number: 4 (lower is better)
Translates to: SFAFKAYIFLPNAGLFLHPQVPP*QVHGLC
Trigger: ACATAATCCATGGACCTGTCATGGCGGCACTTGTGG...GTGAAGAAAAAGACCTGCATTTGGCAGGAAGATGTATGCTTTGAATGCAAAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR GCA 90 bp TTTGAATTGGGCCCATTGGCGCTTCACGGTGGTTTGGACCTCATTGTTGCAGAAATAGCATTTGTACTGTaGATCCATCATCTTCTTTCG +
Preference number: 4 (lower is better)
Translates to: FELGPLALHGGLDLIVAEIAFVL*IHHLLS
Trigger: CGAAAGAAGATGATGGATGCACAGTACAAATGCTAT...TTCTGCAACAATGAGGTCCAAACCACCGTGAAGCGCCAATGGGCCCAATTCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
CDS-3UTR GCA 90 bp CAGCAGTTGTCATTGAAGTACACGGCCCTGGTAATAGCATGGATAGTGGTTGGCATAGCATTTGTACTGTaGATCCATCATCTTCTTTCG +
Preference number: 4 (lower is better)
Translates to: QQLSLKYTALVIAWIVVGIAFVL*IHHLLS
Trigger: CGAAAGAAGATGATGGATGCACAGTACAAATGCTAT...GCCAACCACTATCCATGCTATTACCAGGGCCGTGTACTTCAATGACAACTGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
CDS-3UTR GCA 90 bp GTTCCACTGAATTTTGAATTGGGCCCATTGGCGCTTCACGGTGGTTTGGACCTCATAGTACAGAACATATaGATTCTTCAGTTTCTCAGG +
Preference number: 4 (lower is better)
Translates to: VPLNFELGPLALHGGLDLIVQNI*ILQFLR
Trigger: CCTGAGAAACTGAAGAATGCATATGTTCTGTACTAT...GAGGTCCAAACCACCGTGAAGCGCCAATGGGCCCAATTCAAAATTCAGTGGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
CDS-3UTR GCA 90 bp CCTGGGAGGATGGAGAATACTTTAAATGCATGGTCTTTCTCCCAGGAAATGATGAGAAACATGTTCTTGTaGAGGGTTACCCTTTGGCAG +
Preference number: 4 (lower is better)
Translates to: PGRMENTLNAWSFSQEMMRNMFL*RVTLWQ
Trigger: CTGCCAAAGGGTAACCCTGCACAAGAACATGTTTCT...CATCATTTCCTGGGAGAAAGACCATGCATTTAAAGTATTCTCCATCCTCCCAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR GCA 90 bp TGGTCGCAACAAAGAAGCCCTGGAAATGAATCAGAGAGTGCATCACGTAATCATAAAAATGCAAAATCTTaGAGCTCACCGGGTCCCTTC +
Preference number: 4 (lower is better)
Translates to: WSQQRSPGNESESASRNHKNAKS*SSPGPF
Trigger: GAAGGGACCCGGTGAGCTGCAAGATTTTGCATTTTT...ATGATTACGTGATGCACTCTCTGATTCATTTCCAGGGCTTCTTTGTTGCGACCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
CDS-3UTR GCA 90 bp CCTGGGAGGATGGAGAATACTTTAAATGCATGGTCTTTCTCCCAGGAAATGATGAAAAATGCAAAATCTTaGAGCTCACCGGGTCCCTTC +
Preference number: 4 (lower is better)
Translates to: PGRMENTLNAWSFSQEMMKNAKS*SSPGPF
Trigger: GAAGGGACCCGGTGAGCTGCAAGATTTTGCATTTTT...CATCATTTCCTGGGAGAAAGACCATGCATTTAAAGTATTCTCCATCCTCCCAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR GCA 90 bp TCACAAGTTGCAGTGGGAGACTCCATTCCTAGACTGTCTCCCAAAGCAACAGTACAAGCAGATGACTCTTaGTCTATGATATTCAAAGGG +
Preference number: 4 (lower is better)
Translates to: SQVAVGDSIPRLSPKATVQADDS*SMIFKG
Trigger: CCCTTTGAATATCATAGAGCAAGAGTCATCTGCTTG...TACTGTTGCTTTGGGAGACAGTCTAGGAATGGAGTCTCCCACTGCAACTTGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR GCA 90 bp TCACAAGTTGCAGTGGGAGACTCCATTCCTAGACTGTCTCCCAAAGCAACAGTAGGAGAATACTTTAAATaGATGGTCTTTCTCCCAGGA +
Preference number: 4 (lower is better)
Translates to: SQVAVGDSIPRLSPKATVGEYFK*MVFLPG
Trigger: TCCTGGGAGAAAGACCATGCATTTAAAGTATTCTCC...TACTGTTGCTTTGGGAGACAGTCTAGGAATGGAGTCTCCCACTGCAACTTGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR GCA 90 bp TCACAAGTTGCAGTGGGAGACTCCATTCCTAGACTGTCTCCCAAAGCAACAGTACATTACTGTGACATTTaGATCTCAGTCCTGGATGAA +
Preference number: 4 (lower is better)
Translates to: SQVAVGDSIPRLSPKATVHYCDI*ISVLDE
Trigger: TTCATCCAGGACTGAGATGCAAATGTCACAGTAATG...TACTGTTGCTTTGGGAGACAGTCTAGGAATGGAGTCTCCCACTGCAACTTGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR GCA 90 bp TCTTTTGCATTCAAAGCATACATCTTCCTGCCAAATGCAGGTCTTTTTCTTCACACAACAGCTAGGTCCTaGCCAATGGACAGGCTTGTC +
Preference number: 4 (lower is better)
Translates to: SFAFKAYIFLPNAGLFLHTTARS*PMDRLV
Trigger: GACAAGCCTGTCCATTGGGCAGGACCTAGCTGTTGT...GTGAAGAAAAAGACCTGCATTTGGCAGGAAGATGTATGCTTTGAATGCAAAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR GCA 90 bp GTCTTGCAGAGGTCACGTAGTTCATGTGGTTTACATTGTAAGGATGGTAAAACATTCTTTCCCCTGGCTTaGTTTCTACCTCCCCAGAGT +
Preference number: 4 (lower is better)
Translates to: VLQRSRSSCGLHCKDGKTFFPLA*FLPPQS
Trigger: ACTCTGGGGAGGTAGAAAGCAAGCCAGGGGAAAGAA...TGTTTTACCATCCTTACAATGTAAACCACATGAACTACGTGACCTCTGCAAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000649521.1
CDS-3UTR CCA 90 bp TCTTTTGCATTCAAAGCATACATCTTCCTGCCAAATGCAGGTCTTTTTCTTCACTGCAGGGTTACCCTTTaGCAGCCAAGGCTCCTGAAA +
Preference number: 4 (lower is better)
Translates to: SFAFKAYIFLPNAGLFLHCRVTL*QPRLLK
Trigger: TTTCAGGAGCCTTGGCTGCCAAAGGGTAACCCTGCA...GTGAAGAAAAAGACCTGCATTTGGCAGGAAGATGTATGCTTTGAATGCAAAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426151.7
CDS-3UTR CCA 90 bp AGCAAATGGGTTTCCACACTCAGCCAGCAGTTGTCATTGAAGTACACGGCCCTGACTACTTCAACCAGGTaGATGATGATAATCATAGAA +
Preference number: 4 (lower is better)
Translates to: SKWVSTLSQQLSLKYTALTTSTR*MMIIIE
Trigger: TTCTATGATTATCATCATCCACCTGGTTGAAGTAGT...CAGGGCCGTGTACTTCAATGACAACTGCTGGCTGAGTGTGGAAACCCATTTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
CDS-3UTR CCA 90 bp GAAGCTGGGTGGAAAGCAGTTAATGGACTTATGTGGAGTCTTTTAATTACCAATGCCCTGGTAATAGCATaGATAGTGGTTGGCACCAGC +
Preference number: 4 (lower is better)
Translates to: EAGWKAVNGLMWSLLITNALVIA*IVVGTS
Trigger: GCTGGTGCCAACCACTATCCATGCTATTACCAGGGC...ATTGGTAATTAAAAGACTCCACATAAGTCCATTAACTGCTTTCCACCCAGCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR CCA 90 bp GTCTTGCAGAGGTCACGTAGTTCATGTGGTTTACATTGTAAGGATGGTAAAACAGGGTTTCCCTCATTTTaGTCACAAGCACCCGGACAA +
Preference number: 4 (lower is better)
Translates to: VLQRSRSSCGLHCKDGKTGFPSF*SQAPGQ
Trigger: TTGTCCGGGTGCTTGTGACCAAAATGAGGGAAACCC...TGTTTTACCATCCTTACAATGTAAACCACATGAACTACGTGACCTCTGCAAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR CCA 90 bp AATGAATCAGAGAGTGCATCACGTAATCATATATCTTCCCAAGCATCTTGTTGGGCCTTCAGGTACATGTaGGATTCCGCCTCATGGGTT +
Preference number: 4 (lower is better)
Translates to: NESESASRNHISSQASCWAFRYM*DSASWV
Trigger: AACCCATGAGGCGGAATCCCACATGTACCTGAAGGC...CCAACAAGATGCTTGGGAAGATATATGATTACGTGATGCACTCTCTGATTCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
CDS-3UTR CCA 90 bp GAAGCTGGGTGGAAAGCAGTTAATGGACTTATGTGGAGTCTTTTAATTACCAATGCCTTCAGGTACATGTaGGATTCCGCCTCATGGGTT +
Preference number: 4 (lower is better)
Translates to: EAGWKAVNGLMWSLLITNAFRYM*DSASWV
Trigger: AACCCATGAGGCGGAATCCCACATGTACCTGAAGGC...ATTGGTAATTAAAAGACTCCACATAAGTCCATTAACTGCTTTCCACCCAGCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR CCA 90 bp TCTTTTGCATTCAAAGCATACATCTTCCTGCCAAATGCAGGTCTTTTTCTTCACGCACAAGGATCATGGTaGCCTTCACAGCCTTCAGGT +
Preference number: 4 (lower is better)
Translates to: SFAFKAYIFLPNAGLFLHAQGSW*PSQPSG
Trigger: ACCTGAAGGCTGTGAAGGCCACCATGATCCTTGTGC...GTGAAGAAAAAGACCTGCATTTGGCAGGAAGATGTATGCTTTGAATGCAAAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR CCA 90 bp TATGTAAAGCAAATGGGTTTCCACACTCAGCCAGCAGTTGTCATTGAAGTACACTCCCAAGCATCTTGTTaGAAGGTCTCCAGGGAAAGA +
Preference number: 4 (lower is better)
Translates to: YVKQMGFHTQPAVVIEVHSQASC*KVSRER
Trigger: TCTTTCCCTGGAGACCTTCCAACAAGATGCTTGGGA...GTGTACTTCAATGACAACTGCTGGCTGAGTGTGGAAACCCATTTGCTTTACATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
CDS-3UTR CCA 90 bp GTCTTGCAGAGGTCACGTAGTTCATGTGGTTTACATTGTAAGGATGGTAAAACAATTGGCGCTTCACGGTaGTTTGGACCTCATTGTTGC +
Preference number: 4 (lower is better)
Translates to: VLQRSRSSCGLHCKDGKTIGASR*FGPHCC
Trigger: GCAACAATGAGGTCCAAACCACCGTGAAGCGCCAAT...TGTTTTACCATCCTTACAATGTAAACCACATGAACTACGTGACCTCTGCAAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR CCA 90 bp ACATATTTACTAATCTCTCTATTAGAAAGCCGCTTTGTCTTGCAGAGGTCACGTTTGAATTGGGCCCATTaGCGCTTCACGGTGGTTTGG +
Preference number: 4 (lower is better)
Translates to: TYLLISLLESRFVLQRSRLNWAH*RFTVVW
Trigger: CCAAACCACCGTGAAGCGCCAATGGGCCCAATTCAA...ACGTGACCTCTGCAAGACAAAGCGGCTTTCTAATAGAGAGATTAGTAAATATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR CCA 90 bp ACATATTTACTAATCTCTCTATTAGAAAGCCGCTTTGTCTTGCAGAGGTCACGTGCCTTGGTTGTTGGCTaGTTCATTCCTCAGCTCCTG +
Preference number: 4 (lower is better)
Translates to: TYLLISLLESRFVLQRSRALVVG*FIPQLL
Trigger: CAGGAGCTGAGGAATGAACCAGCCAACAACCAAGGC...ACGTGACCTCTGCAAGACAAAGCGGCTTTCTAATAGAGAGATTAGTAAATATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR CCA 90 bp GAAGCTGGGTGGAAAGCAGTTAATGGACTTATGTGGAGTCTTTTAATTACCAATGCCTTGGTTGTTGGCTaGTTCATTCCTCAGCTCCTG +
Preference number: 4 (lower is better)
Translates to: EAGWKAVNGLMWSLLITNALVVG*FIPQLL
Trigger: CAGGAGCTGAGGAATGAACCAGCCAACAACCAAGGC...ATTGGTAATTAAAAGACTCCACATAAGTCCATTAACTGCTTTCCACCCAGCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR CCA 90 bp ACATATTTACTAATCTCTCTATTAGAAAGCCGCTTTGTCTTGCAGAGGTCACGTCTGGGGTGGCAAAAGTaGGTGGATCAGTGGGAATCA +
Preference number: 4 (lower is better)
Translates to: TYLLISLLESRFVLQRSRLGWQK*VDQWES
Trigger: TGATTCCCACTGATCCACCCACTTTTGCCACCCCAG...ACGTGACCTCTGCAAGACAAAGCGGCTTTCTAATAGAGAGATTAGTAAATATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649521.1
CDS-3UTR TCA 90 bp CAAAGAAGCCCTGGAAATGAATCAGAGAGTGCATCACGTAATCATATATCTTCCAAGAAGCCCTGGAAATaGATCAGAGAGTGCATCACG +
Preference number: 4 (lower is better)
Translates to: QRSPGNESESASRNHISSKKPWK*IRECIT
Trigger: CGTGATGCACTCTCTGATTCATTTCCAGGGCTTCTT...GGAAGATATATGATTACGTGATGCACTCTCTGATTCATTTCCAGGGCTTCTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
CDS-3UTR TCA 90 bp ACATATTTACTAATCTCTCTATTAGAAAGCCGCTTTGTCTTGCAGAGGTCACGTGGTTCCACTGAATTTTaGATTGGGCCCATTGGCGCT +
Preference number: 4 (lower is better)
Translates to: TYLLISLLESRFVLQRSRGSTEF*IGPIGA
Trigger: AGCGCCAATGGGCCCAATTCAAAATTCAGTGGAACC...ACGTGACCTCTGCAAGACAAAGCGGCTTTCTAATAGAGAGATTAGTAAATATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR TCA 90 bp TCACAAGTTGCAGTGGGAGACTCCATTCCTAGACTGTCTCCCAAAGCAACAGTACAACTAAATCACTTCTaGAAGGCAGTGGCAAAATAT +
Preference number: 4 (lower is better)
Translates to: SQVAVGDSIPRLSPKATVQLNHF*KAVAKY
Trigger: ATATTTTGCCACTGCCTTTCAGAAGTGATTTAGTTG...TACTGTTGCTTTGGGAGACAGTCTAGGAATGGAGTCTCCCACTGCAACTTGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR TCA 90 bp TCTTTTGCATTCAAAGCATACATCTTCCTGCCAAATGCAGGTCTTTTTCTTCACCTGGCTTTCCTAGTTTaGTGCGAGAGCAAACTGCGT +
Preference number: 4 (lower is better)
Translates to: SFAFKAYIFLPNAGLFLHLAFLV*CESKLR
Trigger: ACGCAGTTTGCTCTCGCATCAAACTAGGAAAGCCAG...GTGAAGAAAAAGACCTGCATTTGGCAGGAAGATGTATGCTTTGAATGCAAAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649521.1
CDS-3UTR GCA 90 bp ACATATTTACTAATCTCTCTATTAGAAAGCCGCTTTGTCTTGCAGAGGTCACGTGCCATCCATCCCAGGTaGGATTGCAATATGGACCTT +
Preference number: 4 (lower is better)
Translates to: TYLLISLLESRFVLQRSRAIHPR*DCNMDL
Trigger: AAGGTCCATATTGCAATCGCACCTGGGATGGATGGC...ACGTGACCTCTGCAAGACAAAGCGGCTTTCTAATAGAGAGATTAGTAAATATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR GCA 90 bp ACATATTTACTAATCTCTCTATTAGAAAGCCGCTTTGTCTTGCAGAGGTCACGTTACCACCGCAAGCGTTaGTTCTCAGTAAACACAGCC +
Preference number: 4 (lower is better)
Translates to: TYLLISLLESRFVLQRSRYHRKR*FSVNTA
Trigger: GGCTGTGTTTACTGAGAAGCAACGCTTGCGGTGGTA...ACGTGACCTCTGCAAGACAAAGCGGCTTTCTAATAGAGAGATTAGTAAATATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR GCA 90 bp ACATATTTACTAATCTCTCTATTAGAAAGCCGCTTTGTCTTGCAGAGGTCACGTGAAATTGACCACAAGTaGCGCCATGACAGGTCCATG +
Preference number: 4 (lower is better)
Translates to: TYLLISLLESRFVLQRSREIDHK*RHDRSM
Trigger: CATGGACCTGTCATGGCGGCACTTGTGGTCAATTTC...ACGTGACCTCTGCAAGACAAAGCGGCTTTCTAATAGAGAGATTAGTAAATATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR GCA 90 bp AGCAAAAAGAAGAAATTGACCACAAGTGCCGCCATGACAGGTCCATGGATTATGGCAGCCAAGGCTCAATaGCTTCCTATATTTCCAATT +
Preference number: 4 (lower is better)
Translates to: SKKKKLTTSAAMTGPWIMAAKAQ*LPIFPI
Trigger: AATTGGAAATATAGGAAGGCATTGAGCCTTGGCTGC...CATAATCCATGGACCTGTCATGGCGGCACTTGTGGTCAATTTCTTCTTTTTGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423724.5
CDS-3UTR CCA 90 bp GGAGTTCACAAGTTGCAGTGGGAGACTCCATTCCTAGACTGTCTCCCAAAGCAAACTACTTCAACCAGGTaGATGATGATAATCATAGAA +
Preference number: 4 (lower is better)
Translates to: GVHKLQWETPFLDCLPKQTTSTR*MMIIIE
Trigger: TTCTATGATTATCATCATCCACCTGGTTGAAGTAGT...TTGCTTTGGGAGACAGTCTAGGAATGGAGTCTCCCACTGCAACTTGTGAACTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR CCA 90 bp TCTTTTGCATTCAAAGCATACATCTTCCTGCCAAATGCAGGTCTTTTTCTTCACGCACGAGCTCTCCATTaGGTACTACTTCAACCAGGT +
Preference number: 4 (lower is better)
Translates to: SFAFKAYIFLPNAGLFLHARALH*VLLQPG
Trigger: ACCTGGTTGAAGTAGTACCCAATGGAGAGCTCGTGC...GTGAAGAAAAAGACCTGCATTTGGCAGGAAGATGTATGCTTTGAATGCAAAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR CCA 90 bp TTTCTTTTGCATTCAAAGCATACATCTTCCTGCCAAATGCAGGTCTTTTTCTTCGCCCTGGTAATAGCATaGATAGTGGTTGGCACCAGC +
Preference number: 4 (lower is better)
Translates to: FLLHSKHTSSCQMQVFFFALVIA*IVVGTS
Trigger: GCTGGTGCCAACCACTATCCATGCTATTACCAGGGC...GAAGAAAAAGACCTGCATTTGGCAGGAAGATGTATGCTTTGAATGCAAAAGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR CCA 90 bp ACATATTTACTAATCTCTCTATTAGAAAGCCGCTTTGTCTTGCAGAGGTCACGTTGGGATTCCGCCTCATaGGTTTCCCTCATTTTGGTC +
Preference number: 4 (lower is better)
Translates to: TYLLISLLESRFVLQRSRWDSAS*VSLILV
Trigger: GACCAAAATGAGGGAAACCCATGAGGCGGAATCCCA...ACGTGACCTCTGCAAGACAAAGCGGCTTTCTAATAGAGAGATTAGTAAATATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR CCA 90 bp TCTTTTGCATTCAAAGCATACATCTTCCTGCCAAATGCAGGTCTTTTTCTTCACTGGGATTCCGCCTCATaGGTTTCCCTCATTTTGGTC +
Preference number: 4 (lower is better)
Translates to: SFAFKAYIFLPNAGLFLHWDSAS*VSLILV
Trigger: GACCAAAATGAGGGAAACCCATGAGGCGGAATCCCA...GTGAAGAAAAAGACCTGCATTTGGCAGGAAGATGTATGCTTTGAATGCAAAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR CCA 90 bp ACATATTTACTAATCTCTCTATTAGAAAGCCGCTTTGTCTTGCAGAGGTCACGTCGCTTCACGGTGGTTTaGACCTCATTGTTGCAGAAG +
Preference number: 4 (lower is better)
Translates to: TYLLISLLESRFVLQRSRRFTVV*TSLLQK
Trigger: CTTCTGCAACAATGAGGTCCAAACCACCGTGAAGCG...ACGTGACCTCTGCAAGACAAAGCGGCTTTCTAATAGAGAGATTAGTAAATATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR CCA 90 bp CCTGGGAGGATGGAGAATACTTTAAATGCATGGTCTTTCTCCCAGGAAATGATGTTTGCATCTCAGTCCTaGATGAATGATGGAGTTCAC +
Preference number: 4 (lower is better)
Translates to: PGRMENTLNAWSFSQEMMFASQS*MNDGVH
Trigger: GTGAACTCCATCATTCATCCAGGACTGAGATGCAAA...CATCATTTCCTGGGAGAAAGACCATGCATTTAAAGTATTCTCCATCCTCCCAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR CCA 90 bp TTTCTTTTGCATTCAAAGCATACATCTTCCTGCCAAATGCAGGTCTTTTTCTTCCTAGGTCCTGCCCAATaGACAGGCTTGTCCAAAACC +
Preference number: 4 (lower is better)
Translates to: FLLHSKHTSSCQMQVFFFLGPAQ*TGLSKT
Trigger: GGTTTTGGACAAGCCTGTCCATTGGGCAGGACCTAG...GAAGAAAAAGACCTGCATTTGGCAGGAAGATGTATGCTTTGAATGCAAAAGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR CCA 90 bp GAAGCTGGGTGGAAAGCAGTTAATGGACTTATGTGGAGTCTTTTAATTACCAATAACTGTTCTTTCCCCTaGCTTGCTTTCTACCTCCCC +
Preference number: 4 (lower is better)
Translates to: EAGWKAVNGLMWSLLITNNCSFP*LAFYLP
Trigger: GGGGAGGTAGAAAGCAAGCCAGGGGAAAGAACAGTT...ATTGGTAATTAAAAGACTCCACATAAGTCCATTAACTGCTTTCCACCCAGCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649521.1
CDS-3UTR CCA 90 bp GAAGCTGGGTGGAAAGCAGTTAATGGACTTATGTGGAGTCTTTTAATTACCAATAATTGCATCCTGGGGTaGCAAAAGTGGGTGGATCAG +
Preference number: 4 (lower is better)
Translates to: EAGWKAVNGLMWSLLITNNCILG*QKWVDQ
Trigger: CTGATCCACCCACTTTTGCCACCCCAGGATGCAATT...ATTGGTAATTAAAAGACTCCACATAAGTCCATTAACTGCTTTCCACCCAGCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000649521.1
CDS-3UTR TCA 90 bp AATGAATCAGAGAGTGCATCACGTAATCATATATCTTCCCAAGCATCTTGTTGGCAACGCTGGTTCCACTaGATTTTGAATTGGGCCCAT +
Preference number: 4 (lower is better)
Translates to: NESESASRNHISSQASCWQRWFH*ILNWAH
Trigger: ATGGGCCCAATTCAAAATTCAGTGGAACCAGCGTTG...CCAACAAGATGCTTGGGAAGATATATGATTACGTGATGCACTCTCTGATTCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
CDS-3UTR TCA 90 bp GAAGCTGGGTGGAAAGCAGTTAATGGACTTATGTGGAGTCTTTTAATTACCAATGAAATGATGGCTCAGTaGTCACGATGCTGTGTTTGC +
Preference number: 4 (lower is better)
Translates to: EAGWKAVNGLMWSLLITNEMMAQ*SRCCVC
Trigger: GCAAACACAGCATCGTGATCACTGAGCCATCATTTC...ATTGGTAATTAAAAGACTCCACATAAGTCCATTAACTGCTTTCCACCCAGCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR TCA 90 bp GAAGCTGGGTGGAAAGCAGTTAATGGACTTATGTGGAGTCTTTTAATTACCAATCTTTCTCCCAGGAAATaGTGGCTCAGTGATCACGAT +
Preference number: 4 (lower is better)
Translates to: EAGWKAVNGLMWSLLITNLSPRK*WLSDHD
Trigger: ATCGTGATCACTGAGCCATCATTTCCTGGGAGAAAG...ATTGGTAATTAAAAGACTCCACATAAGTCCATTAACTGCTTTCCACCCAGCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR TCA 90 bp CCTGGGAGGATGGAGAATACTTTAAATGCATGGTCTTTCTCCCAGGAAATGATGCCTCTCCTGGTTTTCTaGCACTTTAAATCTGTCTTA +
Preference number: 4 (lower is better)
Translates to: PGRMENTLNAWSFSQEMMPLLVF*HFKSVL
Trigger: TAAGACAGATTTAAAGTGTCAGAAAACCAGGAGAGG...CATCATTTCCTGGGAGAAAGACCATGCATTTAAAGTATTCTCCATCCTCCCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649521.1
CDS-3UTR GCA 90 bp TCACAAGTTGCAGTGGGAGACTCCATTCCTAGACTGTCTCCCAAAGCAACAGTAATAGTACAGAACATATaGATTCTTCAGTTTCTCAGG +
Preference number: 4 (lower is better)
Translates to: SQVAVGDSIPRLSPKATVIVQNI*ILQFLR
Trigger: CCTGAGAAACTGAAGAATGCATATGTTCTGTACTAT...TACTGTTGCTTTGGGAGACAGTCTAGGAATGGAGTCTCCCACTGCAACTTGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR GCA 90 bp GTCTTGCAGAGGTCACGTAGTTCATGTGGTTTACATTGTAAGGATGGTAAAACAAAAGCCGCTTTGTCTTaGAGAGGTCACGTAGTTCAT +
Preference number: 4 (lower is better)
Translates to: VLQRSRSSCGLHCKDGKTKAALS*RGHVVH
Trigger: ATGAACTACGTGACCTCTGCAAGACAAAGCGGCTTT...TGTTTTACCATCCTTACAATGTAAACCACATGAACTACGTGACCTCTGCAAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR GCA 90 bp CTGTTGCAAATTCACAAATTAATTTCAGGTGCCAGTAACGATACTGGTTTATTCGATGCGAGAGCAAACTaGGTTAGTCTCAGTCCTCCC +
Preference number: 4 (lower is better)
Translates to: LLQIHKLISGASNDTGLFDARAN*VSLSPP
Trigger: GGGAGGACTGAGACTAACGCAGTTTGCTCTCGCATC...GAATAAACCAGTATCGTTACTGGCACCTGAAATTAATTTGTGAATTTGCAACAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649521.1
CDS-3UTR CCA 90 bp CTGTTGCAAATTCACAAATTAATTTCAGGTGCCAGTAACGATACTGGTTTATTCTTGAATTGGGCCCATTaGCGCTTCACGGTGGTTTGG +
Preference number: 4 (lower is better)
Translates to: LLQIHKLISGASNDTGLFLNWAH*RFTVVW
Trigger: CCAAACCACCGTGAAGCGCCAATGGGCCCAATTCAA...GAATAAACCAGTATCGTTACTGGCACCTGAAATTAATTTGTGAATTTGCAACAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR CCA 90 bp CTGTTGCAAATTCACAAATTAATTTCAGGTGCCAGTAACGATACTGGTTTATTCGCACTCTCCTCGCCTTaGTTGTTGGCTGGTTCATTC +
Preference number: 4 (lower is better)
Translates to: LLQIHKLISGASNDTGLFALSSP*LLAGSF
Trigger: GAATGAACCAGCCAACAACCAAGGCGAGGAGAGTGC...GAATAAACCAGTATCGTTACTGGCACCTGAAATTAATTTGTGAATTTGCAACAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR CCA 90 bp TCTTTTGCATTCAAAGCATACATCTTCCTGCCAAATGCAGGTCTTTTTCTTCACAAGATCTCTTTGTCCTaGAATTCTGTCACTGGGCGG +
Preference number: 4 (lower is better)
Translates to: SFAFKAYIFLPNAGLFLHKISLS*NSVTGR
Trigger: CCGCCCAGTGACAGAATTCCAGGACAAAGAGATCTT...GTGAAGAAAAAGACCTGCATTTGGCAGGAAGATGTATGCTTTGAATGCAAAAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426151.7
CDS-3UTR CCA 90 bp CTGTTGCAAATTCACAAATTAATTTCAGGTGCCAGTAACGATACTGGTTTATTCCTAGGTCCTGCCCAATaGACAGGCTTGTCCAAAACC +
Preference number: 4 (lower is better)
Translates to: LLQIHKLISGASNDTGLFLGPAQ*TGLSKT
Trigger: GGTTTTGGACAAGCCTGTCCATTGGGCAGGACCTAG...GAATAAACCAGTATCGTTACTGGCACCTGAAATTAATTTGTGAATTTGCAACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR TCA 90 bp TCCATGGATTATGTAAAGCAAATGGGTTTCCACACTCAGCCAGCAGTTGTCATTAGAATTGGGGTTGGGTaGTTTAGAAGAAGAAACAGT +
Preference number: 4 (lower is better)
Translates to: SMDYVKQMGFHTQPAVVIRIGVG*FRRRNS
Trigger: ACTGTTTCTTCTTCTAAATCACCCAACCCCAATTCT...AATGACAACTGCTGGCTGAGTGTGGAAACCCATTTGCTTTACATAATCCATGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
CDS-3UTR TCA 90 bp GAAGCTGGGTGGAAAGCAGTTAATGGACTTATGTGGAGTCTTTTAATTACCAATACACAGCCACGACAATaGGTGTATGAAGATAGATCC +
Preference number: 4 (lower is better)
Translates to: EAGWKAVNGLMWSLLITNTQPRQ*VYEDRS
Trigger: GGATCTATCTTCATACACTCATTGTCGTGGCTGTGT...ATTGGTAATTAAAAGACTCCACATAAGTCCATTAACTGCTTTCCACCCAGCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR TCA 90 bp ACATATTTACTAATCTCTCTATTAGAAAGCCGCTTTGTCTTGCAGAGGTCACGTACACAGCCACGACAATaGGTGTATGAAGATAGATCC +
Preference number: 4 (lower is better)
Translates to: TYLLISLLESRFVLQRSRTQPRQ*VYEDRS
Trigger: GGATCTATCTTCATACACTCATTGTCGTGGCTGTGT...ACGTGACCTCTGCAAGACAAAGCGGCTTTCTAATAGAGAGATTAGTAAATATGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR TCA 90 bp GTCTTGCAGAGGTCACGTAGTTCATGTGGTTTACATTGTAAGGATGGTAAAACATGTCCAAAACCAAGCTaGGCATGTAATGTTTTCAGC +
Preference number: 4 (lower is better)
Translates to: VLQRSRSSCGLHCKDGKTCPKPS*ACNVFS
Trigger: GCTGAAAACATTACATGCTCAGCTTGGTTTTGGACA...TGTTTTACCATCCTTACAATGTAAACCACATGAACTACGTGACCTCTGCAAGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR TCA 90 bp ACATATTTACTAATCTCTCTATTAGAAAGCCGCTTTGTCTTGCAGAGGTCACGTCGGTCAACCACAAGTTaGTTTCTAATTAGCCCTCCT +
Preference number: 4 (lower is better)
Translates to: TYLLISLLESRFVLQRSRRSTTS*FLISPP
Trigger: AGGAGGGCTAATTAGAAATCAACTTGTGGTTGACCG...ACGTGACCTCTGCAAGACAAAGCGGCTTTCTAATAGAGAGATTAGTAAATATGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR GCA 90 bp ACATATTTACTAATCTCTCTATTAGAAAGCCGCTTTGTCTTGCAGAGGTCACGTGCATCCAGAAATAGTTaGAGGCCATCATGTACTGGT +
Preference number: 4 (lower is better)
Translates to: TYLLISLLESRFVLQRSRASRNS*RPSCTG
Trigger: ACCAGTACATGATGGCCTGCAACTATTTCTGGATGC...ACGTGACCTCTGCAAGACAAAGCGGCTTTCTAATAGAGAGATTAGTAAATATGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR GCA 90 bp CTGTTGCAAATTCACAAATTAATTTCAGGTGCCAGTAACGATACTGGTTTATTCTACCACCGCAAGCGTTaGTTCTCAGTAAACACAGCC +
Preference number: 4 (lower is better)
Translates to: LLQIHKLISGASNDTGLFYHRKR*FSVNTA
Trigger: GGCTGTGTTTACTGAGAAGCAACGCTTGCGGTGGTA...GAATAAACCAGTATCGTTACTGGCACCTGAAATTAATTTGTGAATTTGCAACAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR GCA 90 bp TCCATGGATTATGTAAAGCAAATGGGTTTCCACACTCAGCCAGCAGTTGTCATTCAAGCAGATGACTCTTaGTCTATGATATTCAAAGGG +
Preference number: 4 (lower is better)
Translates to: SMDYVKQMGFHTQPAVVIQADDS*SMIFKG
Trigger: CCCTTTGAATATCATAGAGCAAGAGTCATCTGCTTG...AATGACAACTGCTGGCTGAGTGTGGAAACCCATTTGCTTTACATAATCCATGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
CDS-3UTR GCA 90 bp TTTCTTTTGCATTCAAAGCATACATCTTCCTGCCAAATGCAGGTCTTTTTCTTCATGGAGTTCACAAGTTaGAGTGGGAGACTCCATTCC +
Preference number: 4 (lower is better)
Translates to: FLLHSKHTSSCQMQVFFFMEFTS*SGRLHS
Trigger: GGAATGGAGTCTCCCACTGCAACTTGTGAACTCCAT...GAAGAAAAAGACCTGCATTTGGCAGGAAGATGTATGCTTTGAATGCAAAAGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR CCA 90 bp CTGTTGCAAATTCACAAATTAATTTCAGGTGCCAGTAACGATACTGGTTTATTCTATGGACCTTCTCCTTaGTATGCGGGTAACTGCTGC +
Preference number: 4 (lower is better)
Translates to: LLQIHKLISGASNDTGLFYGPSP*YAGNCC
Trigger: GCAGCAGTTACCCGCATACCAAGGAGAAGGTCCATA...GAATAAACCAGTATCGTTACTGGCACCTGAAATTAATTTGTGAATTTGCAACAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR CCA 90 bp CAGAGAGTGCATCACGTAATCATATATCTTCCCAAGCATCTTGTTGGAAGGTCTATCCGGAAAATAATCTaGGCAGAACTGATAGGACAA +
Preference number: 4 (lower is better)
Translates to: QRVHHVIIYLPKHLVGRSIRKII*AELIGQ
Trigger: TTGTCCTATCAGTTCTGCCCAGATTATTTTCCGGAT...AGACCTTCCAACAAGATGCTTGGGAAGATATATGATTACGTGATGCACTCTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
CDS-3UTR CCA 90 bp CTGTTGCAAATTCACAAATTAATTTCAGGTGCCAGTAACGATACTGGTTTATTCGCACGAGCTCTCCATTaGGTACTACTTCAACCAGGT +
Preference number: 4 (lower is better)
Translates to: LLQIHKLISGASNDTGLFARALH*VLLQPG
Trigger: ACCTGGTTGAAGTAGTACCCAATGGAGAGCTCGTGC...GAATAAACCAGTATCGTTACTGGCACCTGAAATTAATTTGTGAATTTGCAACAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR CCA 90 bp GTCTTGCAGAGGTCACGTAGTTCATGTGGTTTACATTGTAAGGATGGTAAAACAGATATGTTCGGTTCCTaGGAGGATGGAGAATACTTT +
Preference number: 4 (lower is better)
Translates to: VLQRSRSSCGLHCKDGKTDMFGS*EDGEYF
Trigger: AAAGTATTCTCCATCCTCCCAGGAACCGAACATATC...TGTTTTACCATCCTTACAATGTAAACCACATGAACTACGTGACCTCTGCAAGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR CCA 90 bp TCTTTTGCATTCAAAGCATACATCTTCCTGCCAAATGCAGGTCTTTTTCTTCACTGGAGTTTAGGGGAGTaGCAAACTCTCTTTAAAGGG +
Preference number: 4 (lower is better)
Translates to: SFAFKAYIFLPNAGLFLHWSLGE*QTLFKG
Trigger: CCCTTTAAAGAGAGTTTGCCACTCCCCTAAACTCCA...GTGAAGAAAAAGACCTGCATTTGGCAGGAAGATGTATGCTTTGAATGCAAAAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR CCA 90 bp GTCTTGCAGAGGTCACGTAGTTCATGTGGTTTACATTGTAAGGATGGTAAAACAAGCTTTGAAGCTGGGTaGAAAGCAGTTAATGGACTT +
Preference number: 4 (lower is better)
Translates to: VLQRSRSSCGLHCKDGKTSFEAG*KAVNGL
Trigger: AAGTCCATTAACTGCTTTCCACCCAGCTTCAAAGCT...TGTTTTACCATCCTTACAATGTAAACCACATGAACTACGTGACCTCTGCAAGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR CCA 90 bp GTCTTGCAGAGGTCACGTAGTTCATGTGGTTTACATTGTAAGGATGGTAAAACAATGAGACTGGAGATTTaGAGGGTTTCAATGTACCTC +
Preference number: 4 (lower is better)
Translates to: VLQRSRSSCGLHCKDGKTMRLEI*RVSMYL
Trigger: GAGGTACATTGAAACCCTCCAAATCTCCAGTCTCAT...TGTTTTACCATCCTTACAATGTAAACCACATGAACTACGTGACCTCTGCAAGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR CCA 90 bp GAAGCTGGGTGGAAAGCAGTTAATGGACTTATGTGGAGTCTTTTAATTACCAATGGGAATCATTTATTCTaGAATTCTGTCACTGGGCGG +
Preference number: 4 (lower is better)
Translates to: EAGWKAVNGLMWSLLITNGNHLF*NSVTGR
Trigger: CCGCCCAGTGACAGAATTCCAGAATAAATGATTCCC...ATTGGTAATTAAAAGACTCCACATAAGTCCATTAACTGCTTTCCACCCAGCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649521.1
CDS-3UTR TCA 90 bp CTGTTGCAAATTCACAAATTAATTTCAGGTGCCAGTAACGATACTGGTTTATTCAAGAAGCCCTGGAAATaGATCAGAGAGTGCATCACG +
Preference number: 4 (lower is better)
Translates to: LLQIHKLISGASNDTGLFKKPWK*IRECIT
Trigger: CGTGATGCACTCTCTGATTCATTTCCAGGGCTTCTT...GAATAAACCAGTATCGTTACTGGCACCTGAAATTAATTTGTGAATTTGCAACAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR TCA 90 bp TTTCTTTTGCATTCAAAGCATACATCTTCCTGCCAAATGCAGGTCTTTTTCTTCGGAGCACCCTGTATCTaGACTAGGTCAATTTCATTG +
Preference number: 4 (lower is better)
Translates to: FLLHSKHTSSCQMQVFFFGAPCI*TRSISL
Trigger: CAATGAAATTGACCTAGTTCAGATACAGGGTGCTCC...GAAGAAAAAGACCTGCATTTGGCAGGAAGATGTATGCTTTGAATGCAAAAGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR CCA 90 bp TCTTTTGCATTCAAAGCATACATCTTCCTGCCAAATGCAGGTCTTTTTCTTCACCGTAAAGAAATGGCTTaGGCTCTATTGTTGGATAGG +
Preference number: 4 (lower is better)
Translates to: SFAFKAYIFLPNAGLFLHRKEMA*ALLLDR
Trigger: CCTATCCAACAATAGAGCCCAAGCCATTTCTTTACG...GTGAAGAAAAAGACCTGCATTTGGCAGGAAGATGTATGCTTTGAATGCAAAAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR CCA 90 bp CTGTTGCAAATTCACAAATTAATTTCAGGTGCCAGTAACGATACTGGTTTATTCGGTGCGATTGCAATATaGACCTTCTCCTTGGTATGC +
Preference number: 4 (lower is better)
Translates to: LLQIHKLISGASNDTGLFGAIAI*TFSLVC
Trigger: GCATACCAAGGAGAAGGTCCATATTGCAATCGCACC...GAATAAACCAGTATCGTTACTGGCACCTGAAATTAATTTGTGAATTTGCAACAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR CCA 90 bp CTGTTGCAAATTCACAAATTAATTTCAGGTGCCAGTAACGATACTGGTTTATTCTCCCAAGCATCTTGTTaGAAGGTCTCCAGGGAAAGA +
Preference number: 4 (lower is better)
Translates to: LLQIHKLISGASNDTGLFSQASC*KVSRER
Trigger: TCTTTCCCTGGAGACCTTCCAACAAGATGCTTGGGA...GAATAAACCAGTATCGTTACTGGCACCTGAAATTAATTTGTGAATTTGCAACAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR CCA 90 bp CTGTTGCAAATTCACAAATTAATTTCAGGTGCCAGTAACGATACTGGTTTATTCGTTCACAAGTTGCAGTaGGAGACTCCATTCCTAGAC +
Preference number: 4 (lower is better)
Translates to: LLQIHKLISGASNDTGLFVHKLQ*ETPFLD
Trigger: GTCTAGGAATGGAGTCTCCCACTGCAACTTGTGAAC...GAATAAACCAGTATCGTTACTGGCACCTGAAATTAATTTGTGAATTTGCAACAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR CCA 90 bp GTCTTGCAGAGGTCACGTAGTTCATGTGGTTTACATTGTAAGGATGGTAAAACAAAGTGGGTGGATCAGTaGGAATCATTTATTCTGGAA +
Preference number: 4 (lower is better)
Translates to: VLQRSRSSCGLHCKDGKTKWVDQ*ESFILE
Trigger: TTCCAGAATAAATGATTCCCACTGATCCACCCACTT...TGTTTTACCATCCTTACAATGTAAACCACATGAACTACGTGACCTCTGCAAGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649521.1
CDS-3UTR TCA 90 bp CTGTTGCAAATTCACAAATTAATTTCAGGTGCCAGTAACGATACTGGTTTATTCGGAGCACCCTGTATCTaGACTAGGTCAATTTCATTG +
Preference number: 4 (lower is better)
Translates to: LLQIHKLISGASNDTGLFGAPCI*TRSISL
Trigger: CAATGAAATTGACCTAGTTCAGATACAGGGTGCTCC...GAATAAACCAGTATCGTTACTGGCACCTGAAATTAATTTGTGAATTTGCAACAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR GCA 90 bp GTCTTGCAGAGGTCACGTAGTTCATGTGGTTTACATTGTAAGGATGGTAAAACAATAGCATTTGTACTGTaGATCCATCATCTTCTTTCG +
Preference number: 4 (lower is better)
Translates to: VLQRSRSSCGLHCKDGKTIAFVL*IHHLLS
Trigger: CGAAAGAAGATGATGGATGCACAGTACAAATGCTAT...TGTTTTACCATCCTTACAATGTAAACCACATGAACTACGTGACCTCTGCAAGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR GCA 90 bp CTGTTGCAAATTCACAAATTAATTTCAGGTGCCAGTAACGATACTGGTTTATTCTTTGGACCTCATTGTTaGAGAAGCAGTAGATGGTCG +
Preference number: 4 (lower is better)
Translates to: LLQIHKLISGASNDTGLFFGPHC*RSSRWS
Trigger: CGACCATCTACTGCTTCTGCAACAATGAGGTCCAAA...GAATAAACCAGTATCGTTACTGGCACCTGAAATTAATTTGTGAATTTGCAACAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR GCA 90 bp CTGTTGCAAATTCACAAATTAATTTCAGGTGCCAGTAACGATACTGGTTTATTCAAAGCCGCTTTGTCTTaGAGAGGTCACGTAGTTCAT +
Preference number: 4 (lower is better)
Translates to: LLQIHKLISGASNDTGLFKAALS*RGHVVH
Trigger: ATGAACTACGTGACCTCTGCAAGACAAAGCGGCTTT...GAATAAACCAGTATCGTTACTGGCACCTGAAATTAATTTGTGAATTTGCAACAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR GCA 90 bp TCTTTTGCATTCAAAGCATACATCTTCCTGCCAAATGCAGGTCTTTTTCTTCACGGGCAAGAGGTAATCTaGTTTATAAACCTTGGAGTA +
Preference number: 4 (lower is better)
Translates to: SFAFKAYIFLPNAGLFLHGQEVI*FINLGV
Trigger: TACTCCAAGGTTTATAAAGCAGATTACCTCTTGCCC...GTGAAGAAAAAGACCTGCATTTGGCAGGAAGATGTATGCTTTGAATGCAAAAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR GCA 90 bp GAAGCTGGGTGGAAAGCAGTTAATGGACTTATGTGGAGTCTTTTAATTACCAATCATTTGTACCACAGCTaGCAGAAATACTCTGTTTTC +
Preference number: 4 (lower is better)
Translates to: EAGWKAVNGLMWSLLITNHLYHS*QKYSVF
Trigger: GAAAACAGAGTATTTCTGGCAGCTGTGGTACAAATG...ATTGGTAATTAAAAGACTCCACATAAGTCCATTAACTGCTTTCCACCCAGCTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR CCA 90 bp ACATATTTACTAATCTCTCTATTAGAAAGCCGCTTTGTCTTGCAGAGGTCACGTATCCGGAAAATAATCTaGGCAGAACTGATAGGACAA +
Preference number: 4 (lower is better)
Translates to: TYLLISLLESRFVLQRSRIRKII*AELIGQ
Trigger: TTGTCCTATCAGTTCTGCCCAGATTATTTTCCGGAT...ACGTGACCTCTGCAAGACAAAGCGGCTTTCTAATAGAGAGATTAGTAAATATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR CCA 90 bp TTTCTTTTGCATTCAAAGCATACATCTTCCTGCCAAATGCAGGTCTTTTTCTTCATGAGACTGGAGATTTaGAGGGTTTCAATGTACCTC +
Preference number: 4 (lower is better)
Translates to: FLLHSKHTSSCQMQVFFFMRLEI*RVSMYL
Trigger: GAGGTACATTGAAACCCTCCAAATCTCCAGTCTCAT...GAAGAAAAAGACCTGCATTTGGCAGGAAGATGTATGCTTTGAATGCAAAAGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR TCA 90 bp GAAGCTGGGTGGAAAGCAGTTAATGGACTTATGTGGAGTCTTTTAATTACCAATATAATTCTTCACAAATaGTATGTTCGGTTCCTGGGA +
Preference number: 4 (lower is better)
Translates to: EAGWKAVNGLMWSLLITNIILHK*YVRFLG
Trigger: TCCCAGGAACCGAACATATCATTTGTGAAGAATTAT...ATTGGTAATTAAAAGACTCCACATAAGTCCATTAACTGCTTTCCACCCAGCTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR TCA 90 bp CTGTTGCAAATTCACAAATTAATTTCAGGTGCCAGTAACGATACTGGTTTATTCTGTCCAAAACCAAGCTaGGCATGTAATGTTTTCAGC +
Preference number: 4 (lower is better)
Translates to: LLQIHKLISGASNDTGLFCPKPS*ACNVFS
Trigger: GCTGAAAACATTACATGCTCAGCTTGGTTTTGGACA...GAATAAACCAGTATCGTTACTGGCACCTGAAATTAATTTGTGAATTTGCAACAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR GCA 90 bp GTCTTGCAGAGGTCACGTAGTTCATGTGGTTTACATTGTAAGGATGGTAAAACAATAGTACAGAACATATaGATTCTTCAGTTTCTCAGG +
Preference number: 4 (lower is better)
Translates to: VLQRSRSSCGLHCKDGKTIVQNI*ILQFLR
Trigger: CCTGAGAAACTGAAGAATGCATATGTTCTGTACTAT...TGTTTTACCATCCTTACAATGTAAACCACATGAACTACGTGACCTCTGCAAGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR GCA 90 bp CTGTTGCAAATTCACAAATTAATTTCAGGTGCCAGTAACGATACTGGTTTATTCTCACGATGCTGTGTTTaGTTCACATTCAAGCAGATG +
Preference number: 4 (lower is better)
Translates to: LLQIHKLISGASNDTGLFSRCCV*FTFKQM
Trigger: CATCTGCTTGAATGTGAAGCAAACACAGCATCGTGA...GAATAAACCAGTATCGTTACTGGCACCTGAAATTAATTTGTGAATTTGCAACAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR GCA 90 bp CTGTTGCAAATTCACAAATTAATTTCAGGTGCCAGTAACGATACTGGTTTATTCGCAGCCAAGGCTCAATaGCTTCCTATATTTCCAATT +
Preference number: 4 (lower is better)
Translates to: LLQIHKLISGASNDTGLFAAKAQ*LPIFPI
Trigger: AATTGGAAATATAGGAAGGCATTGAGCCTTGGCTGC...GAATAAACCAGTATCGTTACTGGCACCTGAAATTAATTTGTGAATTTGCAACAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649521.1
CDS-3UTR CCA 90 bp CTGTTGCAAATTCACAAATTAATTTCAGGTGCCAGTAACGATACTGGTTTATTCCGTAAAGAAATGGCTTaGGCTCTATTGTTGGATAGG +
Preference number: 4 (lower is better)
Translates to: LLQIHKLISGASNDTGLFRKEMA*ALLLDR
Trigger: CCTATCCAACAATAGAGCCCAAGCCATTTCTTTACG...GAATAAACCAGTATCGTTACTGGCACCTGAAATTAATTTGTGAATTTGCAACAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
3UTR CAA 72 bp TATTTACTAATCTCTCTATTAGAAAGCCGCTTTGTCTaGCAGAGGTCACGTAGTTCATGTGGTTTACATTGT +
Preference number: 4 (lower is better)
Translates to: YLLISLLESRFV*QRSRSSCGLHC
Trigger: ACAATGTAAACCACATGAACTACGTGACCTCTGCAAGACAAAGCGGCTTTCTAATAGAGAGATTAGTAAATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR TCA 90 bp TTTCTTTTGCATTCAAAGCATACATCTTCCTGCCAAATGCAGGTCTTTTTCTTCTCACATTCAAGCAGATaGCTCTTGCTCTATGATATT +
Preference number: 4 (lower is better)
Translates to: FLLHSKHTSSCQMQVFFFSHSSR*LLLYDI
Trigger: AATATCATAGAGCAAGAGTCATCTGCTTGAATGTGA...GAAGAAAAAGACCTGCATTTGGCAGGAAGATGTATGCTTTGAATGCAAAAGAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR TCA 90 bp TTTCTTTTGCATTCAAAGCATACATCTTCCTGCCAAATGCAGGTCTTTTTCTTCATAATTCTTCACAAATaGTATGTTCGGTTCCTGGGA +
Preference number: 4 (lower is better)
Translates to: FLLHSKHTSSCQMQVFFFIILHK*YVRFLG
Trigger: TCCCAGGAACCGAACATATCATTTGTGAAGAATTAT...GAAGAAAAAGACCTGCATTTGGCAGGAAGATGTATGCTTTGAATGCAAAAGAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR CCA 90 bp CTGTTGCAAATTCACAAATTAATTTCAGGTGCCAGTAACGATACTGGTTTATTCATCCGGAAAATAATCTaGGCAGAACTGATAGGACAA +
Preference number: 4 (lower is better)
Translates to: LLQIHKLISGASNDTGLFIRKII*AELIGQ
Trigger: TTGTCCTATCAGTTCTGCCCAGATTATTTTCCGGAT...GAATAAACCAGTATCGTTACTGGCACCTGAAATTAATTTGTGAATTTGCAACAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR CCA 90 bp GAAGCTGGGTGGAAAGCAGTTAATGGACTTATGTGGAGTCTTTTAATTACCAATACTACTTCAACCAGGTaGATGATGATAATCATAGAA +
Preference number: 4 (lower is better)
Translates to: EAGWKAVNGLMWSLLITNTTSTR*MMIIIE
Trigger: TTCTATGATTATCATCATCCACCTGGTTGAAGTAGT...ATTGGTAATTAAAAGACTCCACATAAGTCCATTAACTGCTTTCCACCCAGCTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR TCA 90 bp CTGTTGCAAATTCACAAATTAATTTCAGGTGCCAGTAACGATACTGGTTTATTCTCACATTCAAGCAGATaGCTCTTGCTCTATGATATT +
Preference number: 4 (lower is better)
Translates to: LLQIHKLISGASNDTGLFSHSSR*LLLYDI
Trigger: AATATCATAGAGCAAGAGTCATCTGCTTGAATGTGA...GAATAAACCAGTATCGTTACTGGCACCTGAAATTAATTTGTGAATTTGCAACAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR TCA 90 bp CTGTTGCAAATTCACAAATTAATTTCAGGTGCCAGTAACGATACTGGTTTATTCCAACTAAATCACTTCTaGAAGGCAGTGGCAAAATAT +
Preference number: 4 (lower is better)
Translates to: LLQIHKLISGASNDTGLFQLNHF*KAVAKY
Trigger: ATATTTTGCCACTGCCTTTCAGAAGTGATTTAGTTG...GAATAAACCAGTATCGTTACTGGCACCTGAAATTAATTTGTGAATTTGCAACAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR GCA 90 bp CTGTTGCAAATTCACAAATTAATTTCAGGTGCCAGTAACGATACTGGTTTATTCATAGCATTTGTACTGTaGATCCATCATCTTCTTTCG +
Preference number: 4 (lower is better)
Translates to: LLQIHKLISGASNDTGLFIAFVL*IHHLLS
Trigger: CGAAAGAAGATGATGGATGCACAGTACAAATGCTAT...GAATAAACCAGTATCGTTACTGGCACCTGAAATTAATTTGTGAATTTGCAACAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR CAA 90 bp CTGCAGCGCGAGCAGAGCGGTTGGAGGGGCGCCTCCCCCAACGCTGGTTCCACTGCGCGAGCAGAGCGGTaGGAGGGGCGCCTCCCCCAA +
Preference number: 5 (lower is better)
Translates to: LQREQSGWRGASPNAGSTARAER*EGRLPQ
Trigger: TTGGGGGAGGCGCCCCTCCAACCGCTCTGCTCGCGC...AGTGGAACCAGCGTTGGGGGAGGCGCCCCTCCAACCGCTCTGCTCGCGCTGCAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
CDS GCA 90 bp CATCTCCTGGGCAGGAGATGTCAGCCGCAGGGTGAGGTGCGGACGTaGGCACTTCTCCAACCCGGGAAGGTCCGCCAGCCGCGCGGCGCA +
Preference number: 5 (lower is better)
Translates to: HLLGRRCQPQGEVRT*ALLQPGKVRQPRGA
Trigger: TGCGCCGCGCGGCTGGCGGACCTTCCCGGGTTGGAGAAGTGCGCACGTCCGCACCTCACCCTGCGGCTGACATCTCCTGCCCAGGAGATG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS CCA 90 bp TGTGGCTCCAGGGACTCAGGCGCTCAAGCTTCAGCGCCCATCTCCTaGGCAGGAGATGTCAGCCGCAGGGTGAGGTGCGGACGTGCGCAC +
Preference number: 5 (lower is better)
Translates to: CGSRDSGAQASAPIS*AGDVSRRVRCGRAH
Trigger: GTGCGCACGTCCGCACCTCACCCTGCGGCTGACATCTCCTGCCCAGGAGATGGGCGCTGAAGCTTGAGCGCCTGAGTCCCTGGAGCCACA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS TCA 90 bp AAGCTTCAGCGCCCATCTCCTGGGCAGGAGATGTCAGCCGCAGGGTaGGGTGCGGACGTGCGCACTTCTCCAACCCGGGAAGGTCCGCCA +
Preference number: 5 (lower is better)
Translates to: KLQRPSPGQEMSAAG*GADVRTSPTREGPP
Trigger: TGGCGGACCTTCCCGGGTTGGAGAAGTGCGCACGTCCGCACCTCACCCTGCGGCTGACATCTCCTGCCCAGGAGATGGGCGCTGAAGCTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS CCA 90 bp CGGGAAGGTCCGCCAGCCGCGCGGCGCAGCCCACCCAGACGCTGGTaGGCTGGCTTTCCTAGTTTGATGCGAGAGCAAACTGCGTTAGTC +
Preference number: 5 (lower is better)
Translates to: REGPPAARRSPPRRW*AGFPSLMREQTALV
Trigger: GACTAACGCAGTTTGCTCTCGCATCAAACTAGGAAAGCCAGCCCACCAGCGTCTGGGTGGGCTGCGCCGCGCGGCTGGCGGACCTTCCCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649521.1
CDS CCA 90 bp ACCCGGGAAGGTCCGCCAGCCGCGCGGCGCAGCCCACCCAGACGCTaGTGGGCTGGCTTTCCTAGTTTGATGCGAGAGCAAACTGCGTTA +
Preference number: 5 (lower is better)
Translates to: TREGPPAARRSPPRR*WAGFPSLMREQTAL
Trigger: TAACGCAGTTTGCTCTCGCATCAAACTAGGAAAGCCAGCCCACCAGCGTCTGGGTGGGCTGCGCCGCGCGGCTGGCGGACCTTCCCGGGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649521.1
CDS-3UTR CAA 90 bp CTGCAGCGCGAGCAGAGCGGTTGGAGGGGCGCCTCCCCCAACGCTGGTTCCACTTGGGTTTCCCTCATTTaGGTCACAAGCACCCGGACA +
Preference number: 5 (lower is better)
Translates to: LQREQSGWRGASPNAGSTWVSLI*VTSTRT
Trigger: TGTCCGGGTGCTTGTGACCAAAATGAGGGAAACCCA...AGTGGAACCAGCGTTGGGGGAGGCGCCCCTCCAACCGCTCTGCTCGCGCTGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
CDS CCA 90 bp GGCGGCTGGGCACAGCTCAATAGAAGCAAAGGGTGTTCGCAGGTGTaGCTCCAGGGACTCAGGCGCTCAAGCTTCAGCGCCCATCTCCTG +
Preference number: 5 (lower is better)
Translates to: GGWAQLNRSKGCSQV*LQGLRRSSFSAHLL
Trigger: CAGGAGATGGGCGCTGAAGCTTGAGCGCCTGAGTCCCTGGAGCCACACCTGCGAACACCCTTTGCTTCTATTGAGCTGTGCCCAGCCGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR CAA 90 bp CTGCAGCGCGAGCAGAGCGGTTGGAGGGGCGCCTCCCCCAACGCTGGTTCCACTATCTTCCCAAGCATCTaGTTGGAAGGTCTCCAGGGA +
Preference number: 5 (lower is better)
Translates to: LQREQSGWRGASPNAGSTIFPSI*LEGLQG
Trigger: TCCCTGGAGACCTTCCAACAAGATGCTTGGGAAGAT...AGTGGAACCAGCGTTGGGGGAGGCGCCCCTCCAACCGCTCTGCTCGCGCTGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
CDS-3UTR CAA 90 bp GGCTGCAGCGCGAGCAGAGCGGTTGGAGGGGCGCCTCCCCCAACGCTGGTTCCAAGCAAAAAGAAGAAATaGACCACAAGTGCCGCCATG +
Preference number: 5 (lower is better)
Translates to: GCSASRAVGGAPPPTLVPSKKKK*TTSAAM
Trigger: CATGGCGGCACTTGTGGTCAATTTCTTCTTTTTGCT...TGGAACCAGCGTTGGGGGAGGCGCCCCTCCAACCGCTCTGCTCGCGCTGCAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
CDS-3UTR CAA 90 bp AGCAAATGGGTTTCCACACTCAGCCAGCAGTTGTCATTGAAGTACACGGCCCTGGCGCGAGCAGAGCGGTaGGAGGGGCGCCTCCCCCAA +
Preference number: 5 (lower is better)
Translates to: SKWVSTLSQQLSLKYTALARAER*EGRLPQ
Trigger: TTGGGGGAGGCGCCCCTCCAACCGCTCTGCTCGCGC...CAGGGCCGTGTACTTCAATGACAACTGCTGGCTGAGTGTGGAAACCCATTTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
CDS-3UTR CAA 90 bp GCTCCTGATGGCAGATGTAAATTGGGATGTCGCCAGCCTCCGCAGCAGCGGCTGCGCACGAGCTCTCCATaGGGTACTACTTCAACCAGG +
Preference number: 5 (lower is better)
Translates to: APDGRCKLGCRQPPQQRLRTSSP*GTTSTR
Trigger: CCTGGTTGAAGTAGTACCCAATGGAGAGCTCGTGCG...CAGCCGCTGCTGCGGAGGCTGGCGACATCCCAATTTACATCTGCCATCAGGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
CDS-3UTR CAA 90 bp CCTGGTAATAGCATGGATAGTGGTTGGCACCAGCGGGAACCGGATGAGAAGGCCGTGCAGGGTTACCCTTaGGCAGCCAAGGCTCCTGAA +
Preference number: 5 (lower is better)
Translates to: PGNSMDSGWHQREPDEKAVQGYP*AAKAPE
Trigger: TTCAGGAGCCTTGGCTGCCAAAGGGTAACCCTGCAC...GGCCTTCTCATCCGGTTCCCGCTGGTGCCAACCACTATCCATGCTATTACCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415529.2
CDS-3UTR CAA 90 bp AGCGCGAGCAGAGCGGTTGGAGGGGCGCCTCCCCCAACGCTGGTTCCACTGAATCAGGAAGAATTGGGGTaGGGTGATTTAGAAGAAGAA +
Preference number: 5 (lower is better)
Translates to: SASRAVGGAPPPTLVPLNQEELG*GDLEEE
Trigger: TTCTTCTTCTAAATCACCCAACCCCAATTCTTCCTG...ATTCAGTGGAACCAGCGTTGGGGGAGGCGCCCCTCCAACCGCTCTGCTCGCGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
CDS-3UTR CAA 90 bp CCTGGGAGGATGGAGAATACTTTAAATGCATGGTCTTTCTCCCAGGAAATGATGGCGCGAGCAGAGCGGTaGGAGGGGCGCCTCCCCCAA +
Preference number: 5 (lower is better)
Translates to: PGRMENTLNAWSFSQEMMARAER*EGRLPQ
Trigger: TTGGGGGAGGCGCCCCTCCAACCGCTCTGCTCGCGC...CATCATTTCCTGGGAGAAAGACCATGCATTTAAAGTATTCTCCATCCTCCCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR CAA 90 bp AGGATCATGGTGGCCTTCACAGCCTTCAGGTACATGTGGGATTCCGCCTCATGGGTGCAGGGTTACCCTTaGGCAGCCAAGGCTCAATGC +
Preference number: 5 (lower is better)
Translates to: RIMVAFTAFRYMWDSASWVQGYP*AAKAQC
Trigger: GCATTGAGCCTTGGCTGCCAAAGGGTAACCCTGCAC...CCATGAGGCGGAATCCCACATGTACCTGAAGGCTGTGAAGGCCACCATGATCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423724.5
CDS-3UTR CAA 90 bp CCTGGTAATAGCATGGATAGTGGTTGGCACCAGCGGGAACCGGATGAGAAGGCCTTTGAATTGGGCCCATaGGCGCTTCACGGTGGTTTG +
Preference number: 5 (lower is better)
Translates to: PGNSMDSGWHQREPDEKAFELGP*ALHGGL
Trigger: CAAACCACCGTGAAGCGCCAATGGGCCCAATTCAAA...GGCCTTCTCATCCGGTTCCCGCTGGTGCCAACCACTATCCATGCTATTACCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
CDS-3UTR CAA 90 bp CTTGTTGGAAGGTCTCCAGGGAAAGACGACAAACTGGATTCCCAGCAGGGGCACGCGCTTCACGGTGGTTaGGACCTCATTGTTGCAGAA +
Preference number: 5 (lower is better)
Translates to: LVGRSPGKDDKLDSQQGHALHGG*DLIVAE
Trigger: TTCTGCAACAATGAGGTCCAAACCACCGTGAAGCGC...GTGCCCCTGCTGGGAATCCAGTTTGTCGTCTTTCCCTGGAGACCTTCCAACAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
CDS-3UTR CAA 90 bp ACATATTTACTAATCTCTCTATTAGAAAGCCGCTTTGTCTTGCAGAGGTCACGTGCGCGAGCAGAGCGGTaGGAGGGGCGCCTCCCCCAA +
Preference number: 5 (lower is better)
Translates to: TYLLISLLESRFVLQRSRARAER*EGRLPQ
Trigger: TTGGGGGAGGCGCCCCTCCAACCGCTCTGCTCGCGC...ACGTGACCTCTGCAAGACAAAGCGGCTTTCTAATAGAGAGATTAGTAAATATGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR CAA 90 bp AGCAAATGGGTTTCCACACTCAGCCAGCAGTTGTCATTGAAGTACACGGCCCTGGATGGCAGATGTAAATaGGGATGTCGCCAGCCTCCG +
Preference number: 5 (lower is better)
Translates to: SKWVSTLSQQLSLKYTALDGRCK*GCRQPP
Trigger: CGGAGGCTGGCGACATCCCAATTTACATCTGCCATC...CAGGGCCGTGTACTTCAATGACAACTGCTGGCTGAGTGTGGAAACCCATTTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
CDS-3UTR CAA 90 bp AGGTACATGTGGGATTCCGCCTCATGGGTTTCCCTCATTTTGGTCACAAGCACCTCCTCGCCTTGGTTGTaGGCTGGTTCATTCCTCAGC +
Preference number: 5 (lower is better)
Translates to: RYMWDSASWVSLILVTSTSSPWL*AGSFLS
Trigger: GCTGAGGAATGAACCAGCCAACAACCAAGGCGAGGA...GGTGCTTGTGACCAAAATGAGGGAAACCCATGAGGCGGAATCCCACATGTACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
CDS-3UTR CAA 90 bp ACAACAGCTAGGTCCTGCCCAATGGACAGGCTTGTCCAAAACCAAGCTGAGCATGTTCTTTCCCCTGGCTaGCTTTCTACCTCCCCAGAG +
Preference number: 5 (lower is better)
Translates to: TTARSCPMDRLVQNQAEHVLSPG*LSTSPE
Trigger: CTCTGGGGAGGTAGAAAGCAAGCCAGGGGAAAGAAC...ATGCTCAGCTTGGTTTTGGACAAGCCTGTCCATTGGGCAGGACCTAGCTGTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000649521.1
CDS-3UTR CAA 90 bp ACAACAGCTAGGTCCTGCCCAATGGACAGGCTTGTCCAAAACCAAGCTGAGCATCCATCCCAGGTGCGATaGCAATATGGACCTTCTCCT +
Preference number: 5 (lower is better)
Translates to: TTARSCPMDRLVQNQAEHPSQVR*QYGPSP
Trigger: AGGAGAAGGTCCATATTGCAATCGCACCTGGGATGG...ATGCTCAGCTTGGTTTTGGACAAGCCTGTCCATTGGGCAGGACCTAGCTGTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR CAA 90 bp GGAGTTCACAAGTTGCAGTGGGAGACTCCATTCCTAGACTGTCTCCCAAAGCAACGCACGAGCTCTCCATaGGGTACTACTTCAACCAGG +
Preference number: 5 (lower is better)
Translates to: GVHKLQWETPFLDCLPKQRTSSP*GTTSTR
Trigger: CCTGGTTGAAGTAGTACCCAATGGAGAGCTCGTGCG...TTGCTTTGGGAGACAGTCTAGGAATGGAGTCTCCCACTGCAACTTGTGAACTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR CAA 90 bp GTGGCCTTCACAGCCTTCAGGTACATGTGGGATTCCGCCTCATGGGTTTCCCTCAGCAAAAAGAAGAAATaGACCACAAGTGCCGCCATG +
Preference number: 5 (lower is better)
Translates to: VAFTAFRYMWDSASWVSLSKKKK*TTSAAM
Trigger: CATGGCGGCACTTGTGGTCAATTTCTTCTTTTTGCT...GAGGGAAACCCATGAGGCGGAATCCCACATGTACCTGAAGGCTGTGAAGGCCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
CDS-3UTR CAA 90 bp GTTCCACTGAATTTTGAATTGGGCCCATTGGCGCTTCACGGTGGTTTGGACCTCTGGGTTTCCCTCATTTaGGTCACAAGCACCCGGACA +
Preference number: 5 (lower is better)
Translates to: VPLNFELGPLALHGGLDLWVSLI*VTSTRT
Trigger: TGTCCGGGTGCTTGTGACCAAAATGAGGGAAACCCA...GAGGTCCAAACCACCGTGAAGCGCCAATGGGCCCAATTCAAAATTCAGTGGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
CDS-3UTR CAA 90 bp ACAACAGCTAGGTCCTGCCCAATGGACAGGCTTGTCCAAAACCAAGCTGAGCATTGGGTTTCCCTCATTTaGGTCACAAGCACCCGGACA +
Preference number: 5 (lower is better)
Translates to: TTARSCPMDRLVQNQAEHWVSLI*VTSTRT
Trigger: TGTCCGGGTGCTTGTGACCAAAATGAGGGAAACCCA...ATGCTCAGCTTGGTTTTGGACAAGCCTGTCCATTGGGCAGGACCTAGCTGTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR CAA 90 bp TTTGAATTGGGCCCATTGGCGCTTCACGGTGGTTTGGACCTCATTGTTGCAGAATCCTCGCCTTGGTTGTaGGCTGGTTCATTCCTCAGC +
Preference number: 5 (lower is better)
Translates to: FELGPLALHGGLDLIVAESSPWL*AGSFLS
Trigger: GCTGAGGAATGAACCAGCCAACAACCAAGGCGAGGA...TTCTGCAACAATGAGGTCCAAACCACCGTGAAGCGCCAATGGGCCCAATTCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
CDS-3UTR CAA 90 bp AGGATCATGGTGGCCTTCACAGCCTTCAGGTACATGTGGGATTCCGCCTCATGGGTAAGAAACATGTTCTaGTGCAGGGTTACCCTTTGG +
Preference number: 5 (lower is better)
Translates to: RIMVAFTAFRYMWDSASWVRNMF*CRVTLW
Trigger: CCAAAGGGTAACCCTGCACAAGAACATGTTTCTTAC...CCATGAGGCGGAATCCCACATGTACCTGAAGGCTGTGAAGGCCACCATGATCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
CDS-3UTR CAA 90 bp TTGTCATTGAAGTACACGGCCCTGGTAATAGCATGGATAGTGGTTGGCACCAGCACACTCAGCCAGCAGTaGTCATTGAAGTACACGGCC +
Preference number: 5 (lower is better)
Translates to: LSLKYTALVIAWIVVGTSTLSQQ*SLKYTA
Trigger: GGCCGTGTACTTCAATGACAACTGCTGGCTGAGTGT...GCTGGTGCCAACCACTATCCATGCTATTACCAGGGCCGTGTACTTCAATGACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
CDS-3UTR CAA 90 bp ACAACAGCTAGGTCCTGCCCAATGGACAGGCTTGTCCAAAACCAAGCTGAGCATATCTTCCCAAGCATCTaGTTGGAAGGTCTCCAGGGA +
Preference number: 5 (lower is better)
Translates to: TTARSCPMDRLVQNQAEHIFPSI*LEGLQG
Trigger: TCCCTGGAGACCTTCCAACAAGATGCTTGGGAAGAT...ATGCTCAGCTTGGTTTTGGACAAGCCTGTCCATTGGGCAGGACCTAGCTGTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR CAA 90 bp GGAGTTCACAAGTTGCAGTGGGAGACTCCATTCCTAGACTGTCTCCCAAAGCAAGCGCTTCACGGTGGTTaGGACCTCATTGTTGCAGAA +
Preference number: 5 (lower is better)
Translates to: GVHKLQWETPFLDCLPKQALHGG*DLIVAE
Trigger: TTCTGCAACAATGAGGTCCAAACCACCGTGAAGCGC...TTGCTTTGGGAGACAGTCTAGGAATGGAGTCTCCCACTGCAACTTGTGAACTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR CAA 90 bp GGAGTTCACAAGTTGCAGTGGGAGACTCCATTCCTAGACTGTCTCCCAAAGCAATTTGAATTGGGCCCATaGGCGCTTCACGGTGGTTTG +
Preference number: 5 (lower is better)
Translates to: GVHKLQWETPFLDCLPKQFELGP*ALHGGL
Trigger: CAAACCACCGTGAAGCGCCAATGGGCCCAATTCAAA...TTGCTTTGGGAGACAGTCTAGGAATGGAGTCTCCCACTGCAACTTGTGAACTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR CAA 90 bp ACAACAGCTAGGTCCTGCCCAATGGACAGGCTTGTCCAAAACCAAGCTGAGCATGATGGAGTTCACAAGTaGCAGTGGGAGACTCCATTC +
Preference number: 5 (lower is better)
Translates to: TTARSCPMDRLVQNQAEHDGVHK*QWETPF
Trigger: GAATGGAGTCTCCCACTGCAACTTGTGAACTCCATC...ATGCTCAGCTTGGTTTTGGACAAGCCTGTCCATTGGGCAGGACCTAGCTGTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR CAA 90 bp GCAGATGACTCTTGCTCTATGATATTCAAAGGGATGATCTCAGCACTCTCCTCGCGCACGAGCTCTCCATaGGGTACTACTTCAACCAGG +
Preference number: 5 (lower is better)
Translates to: ADDSCSMIFKGMISALSSRTSSP*GTTSTR
Trigger: CCTGGTTGAAGTAGTACCCAATGGAGAGCTCGTGCG...CGAGGAGAGTGCTGAGATCATCCCTTTGAATATCATAGAGCAAGAGTCATCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
CDS-3UTR CAA 90 bp TCACAAGTTGCAGTGGGAGACTCCATTCCTAGACTGTCTCCCAAAGCAACAGTAACACTCAGCCAGCAGTaGTCATTGAAGTACACGGCC +
Preference number: 5 (lower is better)
Translates to: SQVAVGDSIPRLSPKATVTLSQQ*SLKYTA
Trigger: GGCCGTGTACTTCAATGACAACTGCTGGCTGAGTGT...TACTGTTGCTTTGGGAGACAGTCTAGGAATGGAGTCTCCCACTGCAACTTGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR CAA 90 bp TTGTCATTGAAGTACACGGCCCTGGTAATAGCATGGATAGTGGTTGGCACCAGCATCTTCCCAAGCATCTaGTTGGAAGGTCTCCAGGGA +
Preference number: 5 (lower is better)
Translates to: LSLKYTALVIAWIVVGTSIFPSI*LEGLQG
Trigger: TCCCTGGAGACCTTCCAACAAGATGCTTGGGAAGAT...GCTGGTGCCAACCACTATCCATGCTATTACCAGGGCCGTGTACTTCAATGACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
CDS-3UTR CAA 90 bp TCACAAGTTGCAGTGGGAGACTCCATTCCTAGACTGTCTCCCAAAGCAACAGTAGCGCTTCACGGTGGTTaGGACCTCATTGTTGCAGAA +
Preference number: 5 (lower is better)
Translates to: SQVAVGDSIPRLSPKATVALHGG*DLIVAE
Trigger: TTCTGCAACAATGAGGTCCAAACCACCGTGAAGCGC...TACTGTTGCTTTGGGAGACAGTCTAGGAATGGAGTCTCCCACTGCAACTTGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR CAA 90 bp AGGGAAAGACGACAAACTGGATTCCCAGCAGGGGCACAAGGATCATGGTGGCCTGCTTGGGCTCTATTGTaGGATAGGTTTGATTTGAAA +
Preference number: 5 (lower is better)
Translates to: RERRQTGFPAGAQGSWWPAWALL*DRFDLK
Trigger: TTTCAAATCAAACCTATCCAACAATAGAGCCCAAGC...AGGCCACCATGATCCTTGTGCCCCTGCTGGGAATCCAGTTTGTCGTCTTTCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
CDS-3UTR CAA 90 bp GCAGATGACTCTTGCTCTATGATATTCAAAGGGATGATCTCAGCACTCTCCTCGAGCCAGCAGTTGTCATaGAAGTACACGGCCCTGGTA +
Preference number: 5 (lower is better)
Translates to: ADDSCSMIFKGMISALSSSQQLS*KYTALV
Trigger: TACCAGGGCCGTGTACTTCAATGACAACTGCTGGCT...CGAGGAGAGTGCTGAGATCATCCCTTTGAATATCATAGAGCAAGAGTCATCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
CDS-3UTR CAA 90 bp ACAACAGCTAGGTCCTGCCCAATGGACAGGCTTGTCCAAAACCAAGCTGAGCATAGCAAAAAGAAGAAATaGACCACAAGTGCCGCCATG +
Preference number: 5 (lower is better)
Translates to: TTARSCPMDRLVQNQAEHSKKKK*TTSAAM
Trigger: CATGGCGGCACTTGTGGTCAATTTCTTCTTTTTGCT...ATGCTCAGCTTGGTTTTGGACAAGCCTGTCCATTGGGCAGGACCTAGCTGTTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR CAA 90 bp GCAGATGACTCTTGCTCTATGATATTCAAAGGGATGATCTCAGCACTCTCCTCGGCGCTTCACGGTGGTTaGGACCTCATTGTTGCAGAA +
Preference number: 5 (lower is better)
Translates to: ADDSCSMIFKGMISALSSALHGG*DLIVAE
Trigger: TTCTGCAACAATGAGGTCCAAACCACCGTGAAGCGC...CGAGGAGAGTGCTGAGATCATCCCTTTGAATATCATAGAGCAAGAGTCATCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
CDS-3UTR CAA 90 bp GCAGATGACTCTTGCTCTATGATATTCAAAGGGATGATCTCAGCACTCTCCTCGTTTGAATTGGGCCCATaGGCGCTTCACGGTGGTTTG +
Preference number: 5 (lower is better)
Translates to: ADDSCSMIFKGMISALSSFELGP*ALHGGL
Trigger: CAAACCACCGTGAAGCGCCAATGGGCCCAATTCAAA...CGAGGAGAGTGCTGAGATCATCCCTTTGAATATCATAGAGCAAGAGTCATCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
CDS-3UTR CAA 90 bp AGCAAAAAGAAGAAATTGACCACAAGTGCCGCCATGACAGGTCCATGGATTATGGATGGCAGATGTAAATaGGGATGTCGCCAGCCTCCG +
Preference number: 5 (lower is better)
Translates to: SKKKKLTTSAAMTGPWIMDGRCK*GCRQPP
Trigger: CGGAGGCTGGCGACATCCCAATTTACATCTGCCATC...CATAATCCATGGACCTGTCATGGCGGCACTTGTGGTCAATTTCTTCTTTTTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
CDS-3UTR CAA 90 bp CCTGGGAGGATGGAGAATACTTTAAATGCATGGTCTTTCTCCCAGGAAATGATGTCCTCGCCTTGGTTGTaGGCTGGTTCATTCCTCAGC +
Preference number: 5 (lower is better)
Translates to: PGRMENTLNAWSFSQEMMSSPWL*AGSFLS
Trigger: GCTGAGGAATGAACCAGCCAACAACCAAGGCGAGGA...CATCATTTCCTGGGAGAAAGACCATGCATTTAAAGTATTCTCCATCCTCCCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR CAA 90 bp TCACAAGTTGCAGTGGGAGACTCCATTCCTAGACTGTCTCCCAAAGCAACAGTAGATGGAGTTCACAAGTaGCAGTGGGAGACTCCATTC +
Preference number: 5 (lower is better)
Translates to: SQVAVGDSIPRLSPKATVDGVHK*QWETPF
Trigger: GAATGGAGTCTCCCACTGCAACTTGTGAACTCCATC...TACTGTTGCTTTGGGAGACAGTCTAGGAATGGAGTCTCCCACTGCAACTTGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR CAA 90 bp TGGTCGCAACAAAGAAGCCCTGGAAATGAATCAGAGAGTGCATCACGTAATCATCCATCCCAGGTGCGATaGCAATATGGACCTTCTCCT +
Preference number: 5 (lower is better)
Translates to: WSQQRSPGNESESASRNHPSQVR*QYGPSP
Trigger: AGGAGAAGGTCCATATTGCAATCGCACCTGGGATGG...ATGATTACGTGATGCACTCTCTGATTCATTTCCAGGGCTTCTTTGTTGCGACCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
CDS-3UTR CAA 90 bp TGGTCGCAACAAAGAAGCCCTGGAAATGAATCAGAGAGTGCATCACGTAATCATAGCCAGCAGTTGTCATaGAAGTACACGGCCCTGGTA +
Preference number: 5 (lower is better)
Translates to: WSQQRSPGNESESASRNHSQQLS*KYTALV
Trigger: TACCAGGGCCGTGTACTTCAATGACAACTGCTGGCT...ATGATTACGTGATGCACTCTCTGATTCATTTCCAGGGCTTCTTTGTTGCGACCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
CDS-3UTR CAA 90 bp AGCAAAAAGAAGAAATTGACCACAAGTGCCGCCATGACAGGTCCATGGATTATGAGCACTCTCCTCGCCTaGGTTGTTGGCTGGTTCATT +
Preference number: 5 (lower is better)
Translates to: SKKKKLTTSAAMTGPWIMSTLLA*VVGWFI
Trigger: AATGAACCAGCCAACAACCAAGGCGAGGAGAGTGCT...CATAATCCATGGACCTGTCATGGCGGCACTTGTGGTCAATTTCTTCTTTTTGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
CDS-3UTR CAA 90 bp ACAACAGCTAGGTCCTGCCCAATGGACAGGCTTGTCCAAAACCAAGCTGAGCATATCACGATGCTGTGTTaGCTTCACATTCAAGCAGAT +
Preference number: 5 (lower is better)
Translates to: TTARSCPMDRLVQNQAEHITMLC*LHIQAD
Trigger: ATCTGCTTGAATGTGAAGCAAACACAGCATCGTGAT...ATGCTCAGCTTGGTTTTGGACAAGCCTGTCCATTGGGCAGGACCTAGCTGTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR CAA 90 bp GTCTTGCAGAGGTCACGTAGTTCATGTGGTTTACATTGTAAGGATGGTAAAACAGTGCAGGGTTACCCTTaGGCAGCCAAGGCTCAATGC +
Preference number: 5 (lower is better)
Translates to: VLQRSRSSCGLHCKDGKTVQGYP*AAKAQC
Trigger: GCATTGAGCCTTGGCTGCCAAAGGGTAACCCTGCAC...TGTTTTACCATCCTTACAATGTAAACCACATGAACTACGTGACCTCTGCAAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649521.1
CDS-3UTR CAA 90 bp GGAGTTCACAAGTTGCAGTGGGAGACTCCATTCCTAGACTGTCTCCCAAAGCAAGATGAGACTGGAGATTaGGAGGGTTTCAATGTACCT +
Preference number: 5 (lower is better)
Translates to: GVHKLQWETPFLDCLPKQDETGD*EGFNVP
Trigger: AGGTACATTGAAACCCTCCAAATCTCCAGTCTCATC...TTGCTTTGGGAGACAGTCTAGGAATGGAGTCTCCCACTGCAACTTGTGAACTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR CAA 90 bp GGAGTTCACAAGTTGCAGTGGGAGACTCCATTCCTAGACTGTCTCCCAAAGCAACAGGAAGAATTGGGGTaGGGTGATTTAGAAGAAGAA +
Preference number: 5 (lower is better)
Translates to: GVHKLQWETPFLDCLPKQQEELG*GDLEEE
Trigger: TTCTTCTTCTAAATCACCCAACCCCAATTCTTCCTG...TTGCTTTGGGAGACAGTCTAGGAATGGAGTCTCCCACTGCAACTTGTGAACTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR CAA 90 bp TCAGGTACATGTGGGATTCCGCCTCATGGGTTTCCCTCATTTTGGTCACAAGCAATGGCTTGGGCTCTATaGTTGGATAGGTTTGATTTG +
Preference number: 5 (lower is better)
Translates to: SGTCGIPPHGFPSFWSQAMAWAL*LDRFDL
Trigger: CAAATCAAACCTATCCAACAATAGAGCCCAAGCCAT...TGCTTGTGACCAAAATGAGGGAAACCCATGAGGCGGAATCCCACATGTACCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
CDS-3UTR CAA 90 bp TTTGAATTGGGCCCATTGGCGCTTCACGGTGGTTTGGACCTCATTGTTGCAGAAATGGCTTGGGCTCTATaGTTGGATAGGTTTGATTTG +
Preference number: 5 (lower is better)
Translates to: FELGPLALHGGLDLIVAEMAWAL*LDRFDL
Trigger: CAAATCAAACCTATCCAACAATAGAGCCCAAGCCAT...TTCTGCAACAATGAGGTCCAAACCACCGTGAAGCGCCAATGGGCCCAATTCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
CDS-3UTR CAA 90 bp TCCATGGATTATGTAAAGCAAATGGGTTTCCACACTCAGCCAGCAGTTGTCATTCCATCCCAGGTGCGATaGCAATATGGACCTTCTCCT +
Preference number: 5 (lower is better)
Translates to: SMDYVKQMGFHTQPAVVIPSQVR*QYGPSP
Trigger: AGGAGAAGGTCCATATTGCAATCGCACCTGGGATGG...AATGACAACTGCTGGCTGAGTGTGGAAACCCATTTGCTTTACATAATCCATGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
CDS-3UTR CAA 90 bp ACAACAGCTAGGTCCTGCCCAATGGACAGGCTTGTCCAAAACCAAGCTGAGCATTTGGACCAGGTTCGATaGTTTTCAGGATGTTTAAAC +
Preference number: 5 (lower is better)
Translates to: TTARSCPMDRLVQNQAEHLDQVR*FSGCLN
Trigger: GTTTAAACATCCTGAAAACAATCGAACCTGGTCCAA...ATGCTCAGCTTGGTTTTGGACAAGCCTGTCCATTGGGCAGGACCTAGCTGTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR CAA 90 bp CCTGGGAGGATGGAGAATACTTTAAATGCATGGTCTTTCTCCCAGGAAATGATGCCACTGAATTTTGAATaGGGCCCATTGGCGCTTCAC +
Preference number: 5 (lower is better)
Translates to: PGRMENTLNAWSFSQEMMPLNFE*GPLALH
Trigger: GTGAAGCGCCAATGGGCCCAATTCAAAATTCAGTGG...CATCATTTCCTGGGAGAAAGACCATGCATTTAAAGTATTCTCCATCCTCCCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR CAA 90 bp CAGAGAGTGCATCACGTAATCATATATCTTCCCAAGCATCTTGTTGGAAGGTCTAGCACTCTCCTCGCCTaGGTTGTTGGCTGGTTCATT +
Preference number: 5 (lower is better)
Translates to: QRVHHVIIYLPKHLVGRSSTLLA*VVGWFI
Trigger: AATGAACCAGCCAACAACCAAGGCGAGGAGAGTGCT...AGACCTTCCAACAAGATGCTTGGGAAGATATATGATTACGTGATGCACTCTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
CDS-3UTR CAA 90 bp GGAGTTCACAAGTTGCAGTGGGAGACTCCATTCCTAGACTGTCTCCCAAAGCAAATAAATGGCTCAGTATaGACAAGGAGCACCCTGTAT +
Preference number: 5 (lower is better)
Translates to: GVHKLQWETPFLDCLPKQINGSV*TRSTLY
Trigger: ATACAGGGTGCTCCTTGTCAATACTGAGCCATTTAT...TTGCTTTGGGAGACAGTCTAGGAATGGAGTCTCCCACTGCAACTTGTGAACTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR CAA 90 bp CCTGGGAGGATGGAGAATACTTTAAATGCATGGTCTTTCTCCCAGGAAATGATGGAAAGCCGCTTTGTCTaGCAGAGGTCACGTAGTTCA +
Preference number: 5 (lower is better)
Translates to: PGRMENTLNAWSFSQEMMESRFV*QRSRSS
Trigger: TGAACTACGTGACCTCTGCAAGACAAAGCGGCTTTC...CATCATTTCCTGGGAGAAAGACCATGCATTTAAAGTATTCTCCATCCTCCCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR CAA 90 bp ACAACAGCTAGGTCCTGCCCAATGGACAGGCTTGTCCAAAACCAAGCTGAGCATAGACCCAAGTCTAGGTaGTATTATCAGCTAAAAGAC +
Preference number: 5 (lower is better)
Translates to: TTARSCPMDRLVQNQAEHRPKSR*YYQLKD
Trigger: GTCTTTTAGCTGATAATACAACCTAGACTTGGGTCT...ATGCTCAGCTTGGTTTTGGACAAGCCTGTCCATTGGGCAGGACCTAGCTGTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649521.1
CDS GCA 90 bp GTGATCACGATGCTGTGTTTGCTTCACATTCAAGCAGATGACTCTTaGTCTATGATATTCAAAGGGATGATCTCAGCACTCTCCTCGCCT +
Preference number: 5 (lower is better)
Translates to: VITMLCLLHIQADDS*SMIFKGMISALSSP
Trigger: AGGCGAGGAGAGTGCTGAGATCATCCCTTTGAATATCATAGAGCAAGAGTCATCTGCTTGAATGTGAAGCAAACACAGCATCGTGATCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394441.5
ENST00000426151.7
ENST00000649521.1
CDS-3UTR CAA 90 bp CAGCAGTTGTCATTGAAGTACACGGCCCTGGTAATAGCATGGATAGTGGTTGGCGCTTGGGCTCTATTGTaGGATAGGTTTGATTTGAAA +
Preference number: 5 (lower is better)
Translates to: QQLSLKYTALVIAWIVVGAWALL*DRFDLK
Trigger: TTTCAAATCAAACCTATCCAACAATAGAGCCCAAGC...GCCAACCACTATCCATGCTATTACCAGGGCCGTGTACTTCAATGACAACTGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
CDS-3UTR CAA 90 bp GGAGTTCACAAGTTGCAGTGGGAGACTCCATTCCTAGACTGTCTCCCAAAGCAAGCTTGGGCTCTATTGTaGGATAGGTTTGATTTGAAA +
Preference number: 5 (lower is better)
Translates to: GVHKLQWETPFLDCLPKQAWALL*DRFDLK
Trigger: TTTCAAATCAAACCTATCCAACAATAGAGCCCAAGC...TTGCTTTGGGAGACAGTCTAGGAATGGAGTCTCCCACTGCAACTTGTGAACTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR CAA 90 bp TCTTTTGCATTCAAAGCATACATCTTCCTGCCAAATGCAGGTCTTTTTCTTCACCGCACGAGCTCTCCATaGGGTACTACTTCAACCAGG +
Preference number: 5 (lower is better)
Translates to: SFAFKAYIFLPNAGLFLHRTSSP*GTTSTR
Trigger: CCTGGTTGAAGTAGTACCCAATGGAGAGCTCGTGCG...GTGAAGAAAAAGACCTGCATTTGGCAGGAAGATGTATGCTTTGAATGCAAAAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR CAA 90 bp GTCTTGCAGAGGTCACGTAGTTCATGTGGTTTACATTGTAAGGATGGTAAAACAAGCCAGCAGTTGTCATaGAAGTACACGGCCCTGGTA +
Preference number: 5 (lower is better)
Translates to: VLQRSRSSCGLHCKDGKTSQQLS*KYTALV
Trigger: TACCAGGGCCGTGTACTTCAATGACAACTGCTGGCT...TGTTTTACCATCCTTACAATGTAAACCACATGAACTACGTGACCTCTGCAAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR CAA 90 bp CAAAGAAGCCCTGGAAATGAATCAGAGAGTGCATCACGTAATCATATATCTTCCACACTCAGCCAGCAGTaGTCATTGAAGTACACGGCC +
Preference number: 5 (lower is better)
Translates to: QRSPGNESESASRNHISSTLSQQ*SLKYTA
Trigger: GGCCGTGTACTTCAATGACAACTGCTGGCTGAGTGT...GGAAGATATATGATTACGTGATGCACTCTCTGATTCATTTCCAGGGCTTCTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
CDS-3UTR CAA 90 bp TCTTTTGCATTCAAAGCATACATCTTCCTGCCAAATGCAGGTCTTTTTCTTCACGATGGCAGATGTAAATaGGGATGTCGCCAGCCTCCG +
Preference number: 5 (lower is better)
Translates to: SFAFKAYIFLPNAGLFLHDGRCK*GCRQPP
Trigger: CGGAGGCTGGCGACATCCCAATTTACATCTGCCATC...GTGAAGAAAAAGACCTGCATTTGGCAGGAAGATGTATGCTTTGAATGCAAAAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR CAA 90 bp ACATATTTACTAATCTCTCTATTAGAAAGCCGCTTTGTCTTGCAGAGGTCACGTGCCCAATGGACAGGCTaGTCCAAAACCAAGCTGAGC +
Preference number: 5 (lower is better)
Translates to: TYLLISLLESRFVLQRSRAQWTG*SKTKLS
Trigger: GCTCAGCTTGGTTTTGGACAAGCCTGTCCATTGGGC...ACGTGACCTCTGCAAGACAAAGCGGCTTTCTAATAGAGAGATTAGTAAATATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS TCA 90 bp TGGCTCAGTGATCACGATGCTGTGTTTGCTTCACATTCAAGCAGATaGCTCTTGCTCTATGATATTCAAAGGGATGATCTCAGCACTCTC +
Preference number: 5 (lower is better)
Translates to: WLSDHDAVFASHSSR*LLLYDIQRDDLSTL
Trigger: GAGAGTGCTGAGATCATCCCTTTGAATATCATAGAGCAAGAGTCATCTGCTTGAATGTGAAGCAAACACAGCATCGTGATCACTGAGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR CAA 90 bp CTGTTGCAAATTCACAAATTAATTTCAGGTGCCAGTAACGATACTGGTTTATTCGTGCAGGGTTACCCTTaGGCAGCCAAGGCTCCTGAA +
Preference number: 5 (lower is better)
Translates to: LLQIHKLISGASNDTGLFVQGYP*AAKAPE
Trigger: TTCAGGAGCCTTGGCTGCCAAAGGGTAACCCTGCAC...GAATAAACCAGTATCGTTACTGGCACCTGAAATTAATTTGTGAATTTGCAACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426151.7
CDS-3UTR CAA 90 bp GAAGCTGGGTGGAAAGCAGTTAATGGACTTATGTGGAGTCTTTTAATTACCAATAGCCAGCAGTTGTCATaGAAGTACACGGCCCTGGTA +
Preference number: 5 (lower is better)
Translates to: EAGWKAVNGLMWSLLITNSQQLS*KYTALV
Trigger: TACCAGGGCCGTGTACTTCAATGACAACTGCTGGCT...ATTGGTAATTAAAAGACTCCACATAAGTCCATTAACTGCTTTCCACCCAGCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR CAA 90 bp ACATATTTACTAATCTCTCTATTAGAAAGCCGCTTTGTCTTGCAGAGGTCACGTACACTCAGCCAGCAGTaGTCATTGAAGTACACGGCC +
Preference number: 5 (lower is better)
Translates to: TYLLISLLESRFVLQRSRTLSQQ*SLKYTA
Trigger: GGCCGTGTACTTCAATGACAACTGCTGGCTGAGTGT...ACGTGACCTCTGCAAGACAAAGCGGCTTTCTAATAGAGAGATTAGTAAATATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR CAA 90 bp ACATATTTACTAATCTCTCTATTAGAAAGCCGCTTTGTCTTGCAGAGGTCACGTTGGGTTTCCCTCATTTaGGTCACAAGCACCCGGACA +
Preference number: 5 (lower is better)
Translates to: TYLLISLLESRFVLQRSRWVSLI*VTSTRT
Trigger: TGTCCGGGTGCTTGTGACCAAAATGAGGGAAACCCA...ACGTGACCTCTGCAAGACAAAGCGGCTTTCTAATAGAGAGATTAGTAAATATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR CAA 90 bp TCTTTTGCATTCAAAGCATACATCTTCCTGCCAAATGCAGGTCTTTTTCTTCACTTTGAATTGGGCCCATaGGCGCTTCACGGTGGTTTG +
Preference number: 5 (lower is better)
Translates to: SFAFKAYIFLPNAGLFLHFELGP*ALHGGL
Trigger: CAAACCACCGTGAAGCGCCAATGGGCCCAATTCAAA...GTGAAGAAAAAGACCTGCATTTGGCAGGAAGATGTATGCTTTGAATGCAAAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR CAA 90 bp CAAAGAAGCCCTGGAAATGAATCAGAGAGTGCATCACGTAATCATATATCTTCCCCACTGAATTTTGAATaGGGCCCATTGGCGCTTCAC +
Preference number: 5 (lower is better)
Translates to: QRSPGNESESASRNHISSPLNFE*GPLALH
Trigger: GTGAAGCGCCAATGGGCCCAATTCAAAATTCAGTGG...GGAAGATATATGATTACGTGATGCACTCTCTGATTCATTTCCAGGGCTTCTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
CDS-3UTR CAA 90 bp TTTCTTTTGCATTCAAAGCATACATCTTCCTGCCAAATGCAGGTCTTTTTCTTCGATGGCAGATGTAAATaGGGATGTCGCCAGCCTCCG +
Preference number: 5 (lower is better)
Translates to: FLLHSKHTSSCQMQVFFFDGRCK*GCRQPP
Trigger: CGGAGGCTGGCGACATCCCAATTTACATCTGCCATC...GAAGAAAAAGACCTGCATTTGGCAGGAAGATGTATGCTTTGAATGCAAAAGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR CAA 90 bp TTTCTTTTGCATTCAAAGCATACATCTTCCTGCCAAATGCAGGTCTTTTTCTTCTCCTCGCCTTGGTTGTaGGCTGGTTCATTCCTCAGC +
Preference number: 5 (lower is better)
Translates to: FLLHSKHTSSCQMQVFFFSSPWL*AGSFLS
Trigger: GCTGAGGAATGAACCAGCCAACAACCAAGGCGAGGA...GAAGAAAAAGACCTGCATTTGGCAGGAAGATGTATGCTTTGAATGCAAAAGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR CAA 90 bp ACATATTTACTAATCTCTCTATTAGAAAGCCGCTTTGTCTTGCAGAGGTCACGTAGCACTCTCCTCGCCTaGGTTGTTGGCTGGTTCATT +
Preference number: 5 (lower is better)
Translates to: TYLLISLLESRFVLQRSRSTLLA*VVGWFI
Trigger: AATGAACCAGCCAACAACCAAGGCGAGGAGAGTGCT...ACGTGACCTCTGCAAGACAAAGCGGCTTTCTAATAGAGAGATTAGTAAATATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR CAA 90 bp GAAGCTGGGTGGAAAGCAGTTAATGGACTTATGTGGAGTCTTTTAATTACCAATAGCACTCTCCTCGCCTaGGTTGTTGGCTGGTTCATT +
Preference number: 5 (lower is better)
Translates to: EAGWKAVNGLMWSLLITNSTLLA*VVGWFI
Trigger: AATGAACCAGCCAACAACCAAGGCGAGGAGAGTGCT...ATTGGTAATTAAAAGACTCCACATAAGTCCATTAACTGCTTTCCACCCAGCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR CAA 90 bp GGAGTTCACAAGTTGCAGTGGGAGACTCCATTCCTAGACTGTCTCCCAAAGCAAAGCATTTCACATAATTaGGGCAGAACTATGTGCAAT +
Preference number: 5 (lower is better)
Translates to: GVHKLQWETPFLDCLPKQSISHN*GRTMCN
Trigger: ATTGCACATAGTTCTGCCCAAATTATGTGAAATGCT...TTGCTTTGGGAGACAGTCTAGGAATGGAGTCTCCCACTGCAACTTGTGAACTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR CAA 90 bp TGGTCGCAACAAAGAAGCCCTGGAAATGAATCAGAGAGTGCATCACGTAATCATCAGGAAGAATTGGGGTaGGGTGATTTAGAAGAAGAA +
Preference number: 5 (lower is better)
Translates to: WSQQRSPGNESESASRNHQEELG*GDLEEE
Trigger: TTCTTCTTCTAAATCACCCAACCCCAATTCTTCCTG...ATGATTACGTGATGCACTCTCTGATTCATTTCCAGGGCTTCTTTGTTGCGACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
CDS-3UTR CAA 90 bp AGCAAAAAGAAGAAATTGACCACAAGTGCCGCCATGACAGGTCCATGGATTATGAAAAGGCAGGAAGAATaGGGGTTGGGTGATTTAGAA +
Preference number: 5 (lower is better)
Translates to: SKKKKLTTSAAMTGPWIMKRQEE*GLGDLE
Trigger: TTCTAAATCACCCAACCCCAATTCTTCCTGCCTTTT...CATAATCCATGGACCTGTCATGGCGGCACTTGTGGTCAATTTCTTCTTTTTGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
CDS-3UTR CAA 90 bp TTTCTTTTGCATTCAAAGCATACATCTTCCTGCCAAATGCAGGTCTTTTTCTTCCCATCCCAGGTGCGATaGCAATATGGACCTTCTCCT +
Preference number: 5 (lower is better)
Translates to: FLLHSKHTSSCQMQVFFFPSQVR*QYGPSP
Trigger: AGGAGAAGGTCCATATTGCAATCGCACCTGGGATGG...GAAGAAAAAGACCTGCATTTGGCAGGAAGATGTATGCTTTGAATGCAAAAGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR CAA 90 bp GCAGATGACTCTTGCTCTATGATATTCAAAGGGATGATCTCAGCACTCTCCTCGTTGGACCAGGTTCGATaGTTTTCAGGATGTTTAAAC +
Preference number: 5 (lower is better)
Translates to: ADDSCSMIFKGMISALSSLDQVR*FSGCLN
Trigger: GTTTAAACATCCTGAAAACAATCGAACCTGGTCCAA...CGAGGAGAGTGCTGAGATCATCCCTTTGAATATCATAGAGCAAGAGTCATCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
CDS-3UTR CAA 90 bp TCTTTTGCATTCAAAGCATACATCTTCCTGCCAAATGCAGGTCTTTTTCTTCACATCTTCCCAAGCATCTaGTTGGAAGGTCTCCAGGGA +
Preference number: 5 (lower is better)
Translates to: SFAFKAYIFLPNAGLFLHIFPSI*LEGLQG
Trigger: TCCCTGGAGACCTTCCAACAAGATGCTTGGGAAGAT...GTGAAGAAAAAGACCTGCATTTGGCAGGAAGATGTATGCTTTGAATGCAAAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR CAA 90 bp TCTTTTGCATTCAAAGCATACATCTTCCTGCCAAATGCAGGTCTTTTTCTTCACCCACTGAATTTTGAATaGGGCCCATTGGCGCTTCAC +
Preference number: 5 (lower is better)
Translates to: SFAFKAYIFLPNAGLFLHPLNFE*GPLALH
Trigger: GTGAAGCGCCAATGGGCCCAATTCAAAATTCAGTGG...GTGAAGAAAAAGACCTGCATTTGGCAGGAAGATGTATGCTTTGAATGCAAAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR CAA 90 bp GAAGCTGGGTGGAAAGCAGTTAATGGACTTATGTGGAGTCTTTTAATTACCAATGAAAGCCGCTTTGTCTaGCAGAGGTCACGTAGTTCA +
Preference number: 5 (lower is better)
Translates to: EAGWKAVNGLMWSLLITNESRFV*QRSRSS
Trigger: TGAACTACGTGACCTCTGCAAGACAAAGCGGCTTTC...ATTGGTAATTAAAAGACTCCACATAAGTCCATTAACTGCTTTCCACCCAGCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR CAA 90 bp TCACAAGTTGCAGTGGGAGACTCCATTCCTAGACTGTCTCCCAAAGCAACAGTAAGCATTTCACATAATTaGGGCAGAACTATGTGCAAT +
Preference number: 5 (lower is better)
Translates to: SQVAVGDSIPRLSPKATVSISHN*GRTMCN
Trigger: ATTGCACATAGTTCTGCCCAAATTATGTGAAATGCT...TACTGTTGCTTTGGGAGACAGTCTAGGAATGGAGTCTCCCACTGCAACTTGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR CAA 90 bp TTTCTTTTGCATTCAAAGCATACATCTTCCTGCCAAATGCAGGTCTTTTTCTTCGCTGGCTTTCCTAGTTaGATGCGAGAGCAAACTGCG +
Preference number: 5 (lower is better)
Translates to: FLLHSKHTSSCQMQVFFFAGFPS*MREQTA
Trigger: CGCAGTTTGCTCTCGCATCAAACTAGGAAAGCCAGC...GAAGAAAAAGACCTGCATTTGGCAGGAAGATGTATGCTTTGAATGCAAAAGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649521.1
CDS-3UTR CAA 90 bp AGCAAAAAGAAGAAATTGACCACAAGTGCCGCCATGACAGGTCCATGGATTATGTTGGACCAGGTTCGATaGTTTTCAGGATGTTTAAAC +
Preference number: 5 (lower is better)
Translates to: SKKKKLTTSAAMTGPWIMLDQVR*FSGCLN
Trigger: GTTTAAACATCCTGAAAACAATCGAACCTGGTCCAA...CATAATCCATGGACCTGTCATGGCGGCACTTGTGGTCAATTTCTTCTTTTTGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
CDS TCA 90 bp AATACTTTAAATGCATGGTCTTTCTCCCAGGAAATGATGGCTCAGTaGTCACGATGCTGTGTTTGCTTCACATTCAAGCAGATGACTCTT +
Preference number: 5 (lower is better)
Translates to: NTLNAWSFSQEMMAQ*SRCCVCFTFKQMTL
Trigger: AAGAGTCATCTGCTTGAATGTGAAGCAAACACAGCATCGTGATCACTGAGCCATCATTTCCTGGGAGAAAGACCATGCATTTAAAGTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR CAA 90 bp GTCTTGCAGAGGTCACGTAGTTCATGTGGTTTACATTGTAAGGATGGTAAAACACAGGAAGAATTGGGGTaGGGTGATTTAGAAGAAGAA +
Preference number: 5 (lower is better)
Translates to: VLQRSRSSCGLHCKDGKTQEELG*GDLEEE
Trigger: TTCTTCTTCTAAATCACCCAACCCCAATTCTTCCTG...TGTTTTACCATCCTTACAATGTAAACCACATGAACTACGTGACCTCTGCAAGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR CAA 90 bp GTCTTGCAGAGGTCACGTAGTTCATGTGGTTTACATTGTAAGGATGGTAAAACAATGGCTTGGGCTCTATaGTTGGATAGGTTTGATTTG +
Preference number: 5 (lower is better)
Translates to: VLQRSRSSCGLHCKDGKTMAWAL*LDRFDL
Trigger: CAAATCAAACCTATCCAACAATAGAGCCCAAGCCAT...TGTTTTACCATCCTTACAATGTAAACCACATGAACTACGTGACCTCTGCAAGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR CAA 90 bp AATGAATCAGAGAGTGCATCACGTAATCATATATCTTCCCAAGCATCTTGTTGGGTAAGAAACATGTTCTaGTGCAGGGTTACCCTTTGG +
Preference number: 5 (lower is better)
Translates to: NESESASRNHISSQASCWVRNMF*CRVTLW
Trigger: CCAAAGGGTAACCCTGCACAAGAACATGTTTCTTAC...CCAACAAGATGCTTGGGAAGATATATGATTACGTGATGCACTCTCTGATTCATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415529.2
ENST00000423724.5
CDS-3UTR CAA 90 bp GAAGCTGGGTGGAAAGCAGTTAATGGACTTATGTGGAGTCTTTTAATTACCAATGTAAGAAACATGTTCTaGTGCAGGGTTACCCTTTGG +
Preference number: 5 (lower is better)
Translates to: EAGWKAVNGLMWSLLITNVRNMF*CRVTLW
Trigger: CCAAAGGGTAACCCTGCACAAGAACATGTTTCTTAC...ATTGGTAATTAAAAGACTCCACATAAGTCCATTAACTGCTTTCCACCCAGCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR CAA 90 bp TTTCTTTTGCATTCAAAGCATACATCTTCCTGCCAAATGCAGGTCTTTTTCTTCGTAAGAAACATGTTCTaGTGCAGGGTTACCCTTTGG +
Preference number: 5 (lower is better)
Translates to: FLLHSKHTSSCQMQVFFFVRNMF*CRVTLW
Trigger: CCAAAGGGTAACCCTGCACAAGAACATGTTTCTTAC...GAAGAAAAAGACCTGCATTTGGCAGGAAGATGTATGCTTTGAATGCAAAAGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR CAA 90 bp TCTTTTGCATTCAAAGCATACATCTTCCTGCCAAATGCAGGTCTTTTTCTTCACATCACGATGCTGTGTTaGCTTCACATTCAAGCAGAT +
Preference number: 5 (lower is better)
Translates to: SFAFKAYIFLPNAGLFLHITMLC*LHIQAD
Trigger: ATCTGCTTGAATGTGAAGCAAACACAGCATCGTGAT...GTGAAGAAAAAGACCTGCATTTGGCAGGAAGATGTATGCTTTGAATGCAAAAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR CAA 90 bp CTGTTGCAAATTCACAAATTAATTTCAGGTGCCAGTAACGATACTGGTTTATTCCTTCTCTCCAGAAAATaGCATCCTGGGGTGGCAAAA +
Preference number: 5 (lower is better)
Translates to: LLQIHKLISGASNDTGLFLLSRK*HPGVAK
Trigger: TTTTGCCACCCCAGGATGCAATTTTCTGGAGAGAAG...GAATAAACCAGTATCGTTACTGGCACCTGAAATTAATTTGTGAATTTGCAACAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649521.1
CDS-3UTR CAA 90 bp TTTCTTTTGCATTCAAAGCATACATCTTCCTGCCAAATGCAGGTCTTTTTCTTCATGGCTTGGGCTCTATaGTTGGATAGGTTTGATTTG +
Preference number: 5 (lower is better)
Translates to: FLLHSKHTSSCQMQVFFFMAWAL*LDRFDL
Trigger: CAAATCAAACCTATCCAACAATAGAGCCCAAGCCAT...GAAGAAAAAGACCTGCATTTGGCAGGAAGATGTATGCTTTGAATGCAAAAGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR CAA 90 bp CTGTTGCAAATTCACAAATTAATTTCAGGTGCCAGTAACGATACTGGTTTATTCAGCAAAAAGAAGAAATaGACCACAAGTGCCGCCATG +
Preference number: 5 (lower is better)
Translates to: LLQIHKLISGASNDTGLFSKKKK*TTSAAM
Trigger: CATGGCGGCACTTGTGGTCAATTTCTTCTTTTTGCT...GAATAAACCAGTATCGTTACTGGCACCTGAAATTAATTTGTGAATTTGCAACAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR CAA 90 bp TTTCTTTTGCATTCAAAGCATACATCTTCCTGCCAAATGCAGGTCTTTTTCTTCGCTTGGGCTCTATTGTaGGATAGGTTTGATTTGAAA +
Preference number: 5 (lower is better)
Translates to: FLLHSKHTSSCQMQVFFFAWALL*DRFDLK
Trigger: TTTCAAATCAAACCTATCCAACAATAGAGCCCAAGC...GAAGAAAAAGACCTGCATTTGGCAGGAAGATGTATGCTTTGAATGCAAAAGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS-3UTR CAA 90 bp TCTTTTGCATTCAAAGCATACATCTTCCTGCCAAATGCAGGTCTTTTTCTTCACTTTTTGAAGATCTCTTaGTCCTGGAATTCTGTCACT +
Preference number: 5 (lower is better)
Translates to: SFAFKAYIFLPNAGLFLHFLKIS*SWNSVT
Trigger: AGTGACAGAATTCCAGGACAAAGAGATCTTCAAAAA...GTGAAGAAAAAGACCTGCATTTGGCAGGAAGATGTATGCTTTGAATGCAAAAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000426151.7
CDS-3UTR CAA 90 bp CTGTTGCAAATTCACAAATTAATTTCAGGTGCCAGTAACGATACTGGTTTATTCTTGGACCAGGTTCGATaGTTTTCAGGATGTTTAAAC +
Preference number: 5 (lower is better)
Translates to: LLQIHKLISGASNDTGLFLDQVR*FSGCLN
Trigger: GTTTAAACATCCTGAAAACAATCGAACCTGGTCCAA...GAATAAACCAGTATCGTTACTGGCACCTGAAATTAATTTGTGAATTTGCAACAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS GCA 72 bp GGCAGGAGATGTCAGCCGCAGGGTGAGGTGCGGACGTaGGCACTTCTCCAACCCGGGAAGGTCCGCCAGCCG +
Preference number: 6 (lower is better)
Translates to: GRRCQPQGEVRT*ALLQPGKVRQP
Trigger: CGGCTGGCGGACCTTCCCGGGTTGGAGAAGTGCGCACGTCCGCACCTCACCCTGCGGCTGACATCTCCTGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS CCA 72 bp GGTCCGCCAGCCGCGCGGCGCAGCCCACCCAGACGCTaGTGGGCTGGCTTTCCTAGTTTGATGCGAGAGCAA +
Preference number: 6 (lower is better)
Translates to: GPPAARRSPPRR*WAGFPSLMREQ
Trigger: TTGCTCTCGCATCAAACTAGGAAAGCCAGCCCACCAGCGTCTGGGTGGGCTGCGCCGCGCGGCTGGCGGACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649521.1
CDS TCA 72 bp CGCCCATCTCCTGGGCAGGAGATGTCAGCCGCAGGGTaGGGTGCGGACGTGCGCACTTCTCCAACCCGGGAA +
Preference number: 6 (lower is better)
Translates to: RPSPGQEMSAAG*GADVRTSPTRE
Trigger: TTCCCGGGTTGGAGAAGTGCGCACGTCCGCACCTCACCCTGCGGCTGACATCTCCTGCCCAGGAGATGGGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS CCA 72 bp CCGCCAGCCGCGCGGCGCAGCCCACCCAGACGCTGGTaGGCTGGCTTTCCTAGTTTGATGCGAGAGCAAACT +
Preference number: 6 (lower is better)
Translates to: PPAARRSPPRRW*AGFPSLMREQT
Trigger: AGTTTGCTCTCGCATCAAACTAGGAAAGCCAGCCCACCAGCGTCTGGGTGGGCTGCGCCGCGCGGCTGGCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649521.1
CDS CAA 90 bp GCGCGGCGCAGCCCACCCAGACGCTGGTGGGCTGGCTTTCCTAGTTaGATGCGAGAGCAAACTGCGTTAGTCTCAGTCCTCCCTCTCCGC +
Preference number: 6 (lower is better)
Translates to: ARRSPPRRWWAGFPS*MREQTALVSVLPLR
Trigger: GCGGAGAGGGAGGACTGAGACTAACGCAGTTTGCTCTCGCATCAAACTAGGAAAGCCAGCCCACCAGCGTCTGGGTGGGCTGCGCCGCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649521.1
CDS CCA 72 bp GCACAGCTCAATAGAAGCAAAGGGTGTTCGCAGGTGTaGCTCCAGGGACTCAGGCGCTCAAGCTTCAGCGCC +
Preference number: 6 (lower is better)
Translates to: AQLNRSKGCSQV*LQGLRRSSFSA
Trigger: GGCGCTGAAGCTTGAGCGCCTGAGTCCCTGGAGCCACACCTGCGAACACCCTTTGCTTCTATTGAGCTGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS GCA 72 bp CCGGTGTGTCATCCCAGCACAGCCATCCATCCCAGGTaGGATTGCAATATGGACCTTCTCCTTGGTATGCGG +
Preference number: 6 (lower is better)
Translates to: PVCHPSTAIHPR*DCNMDLLLGMR
Trigger: CCGCATACCAAGGAGAAGGTCCATATTGCAATCGCACCTGGGATGGATGGCTGTGCTGGGATGACACACCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000394441.5
ENST00000415529.2
ENST00000423724.5
ENST00000426151.7
ENST00000649521.1
CDS CCA 72 bp CAGTTGTCATTGAAGTACACGGCCCTGGTAATAGCATaGATAGTGGTTGGCACCAGCGGGAACCCCCAGCCC +
Preference number: 6 (lower is better)
Translates to: QLSLKYTALVIA*IVVGTSGNPQP
Trigger: GGGCTGGGGGTTCCCGCTGGTGCCAACCACTATCCATGCTATTACCAGGGCCGTGTACTTCAATGACAACTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394441.5
ENST00000426151.7
ENST00000649521.1
CDS CAA 72 bp AGCCCACCCAGACGCTGGTGGGCTGGCTTTCCTAGTTaGATGCGAGAGCAAACTGCGTTAGTCTCAGTCCTC +
Preference number: 6 (lower is better)
Translates to: SPPRRWWAGFPS*MREQTALVSVL
Trigger: GAGGACTGAGACTAACGCAGTTTGCTCTCGCATCAAACTAGGAAAGCCAGCCCACCAGCGTCTGGGTGGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649521.1
CDS CCA 72 bp GAAGTACACGGCCCTGGTAATAGCATGGATAGTGGTTaGCACCAGCGGGAACCCCCAGCCCAAGAGATAATA +
Preference number: 6 (lower is better)
Translates to: EVHGPGNSMDSG*HQREPPAQEII
Trigger: TATTATCTCTTGGGCTGGGGGTTCCCGCTGGTGCCAACCACTATCCATGCTATTACCAGGGCCGTGTACTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394441.5
ENST00000426151.7
ENST00000649521.1
CDS CCA 72 bp AGATCTCTTTGTCCTGGAATTCTGTCACTGGGCGGCTaGGCACAGCTCAATAGAAGCAAAGGGTGTTCGCAG +
Preference number: 6 (lower is better)
Translates to: RSLCPGILSLGG*AQLNRSKGCSQ
Trigger: CTGCGAACACCCTTTGCTTCTATTGAGCTGTGCCCAGCCGCCCAGTGACAGAATTCCAGGACAAAGAGATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426151.7
CDS CAA 72 bp TTGCAGCTCACCGGGTCCCTTCGCACGAGCTCTCCATaGGGTACTACTTCAACCAGGTGGATGATGATAATC +
Preference number: 6 (lower is better)
Translates to: LQLTGSLRTSSP*GTTSTRWMMII
Trigger: GATTATCATCATCCACCTGGTTGAAGTAGTACCCAATGGAGAGCTCGTGCGAAGGGACCCGGTGAGCTGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000394441.5
ENST00000415529.2
ENST00000423724.5
ENST00000426151.7
ENST00000649521.1
CDS CCA 72 bp GGAATCATTTATTCTGGAATTCTGTCACTGGGCGGCTaGGCACAGCTCAATAGAAGCAAAGGGTGTTCGCAG +
Preference number: 6 (lower is better)
Translates to: GIIYSGILSLGG*AQLNRSKGCSQ
Trigger: CTGCGAACACCCTTTGCTTCTATTGAGCTGTGCCCAGCCGCCCAGTGACAGAATTCCAGAATAAATGATTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649521.1
CDS CCA 72 bp AATTGCATCCTGGGGTGGCAAAAGTGGGTGGATCAGTaGGAATCATTTATTCTGGAATTCTGTCACTGGGCG +
Preference number: 6 (lower is better)
Translates to: NCILGWQKWVDQ*ESFILEFCHWA
Trigger: CGCCCAGTGACAGAATTCCAGAATAAATGATTCCCACTGATCCACCCACTTTTGCCACCCCAGGATGCAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649521.1
CDS CAA 90 bp TGCAAAATCTTGCAGCTCACCGGGTCCCTTCGCACGAGCTCTCCATaGGGTACTACTTCAACCAGGTGGATGATGATAATCATAGAATTC +
Preference number: 6 (lower is better)
Translates to: CKILQLTGSLRTSSP*GTTSTRWMMIIIEF
Trigger: GAATTCTATGATTATCATCATCCACCTGGTTGAAGTAGTACCCAATGGAGAGCTCGTGCGAAGGGACCCGGTGAGCTGCAAGATTTTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394441.5
ENST00000415529.2
ENST00000423724.5
ENST00000426151.7
ENST00000649521.1
CDS TCA 72 bp AATGCATGGTCTTTCTCCCAGGAAATGATGGCTCAGTaGTCACGATGCTGTGTTTGCTTCACATTCAAGCAG +
Preference number: 6 (lower is better)
Translates to: NAWSFSQEMMAQ*SRCCVCFTFKQ
Trigger: CTGCTTGAATGTGAAGCAAACACAGCATCGTGATCACTGAGCCATCATTTCCTGGGAGAAAGACCATGCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS CAA 72 bp CCAGGAAATGATGGCTCAGTGATCACGATGCTGTGTTaGCTTCACATTCAAGCAGATGACTCTTGCTCTATG +
Preference number: 6 (lower is better)
Translates to: PGNDGSVITMLC*LHIQADDSCSM
Trigger: CATAGAGCAAGAGTCATCTGCTTGAATGTGAAGCAAACACAGCATCGTGATCACTGAGCCATCATTTCCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS CAA 72 bp GTAAGTAAGAAACATGTTCTTGTGCAGGGTTACCCTTaGGCAGCCAAGGCTCAATGCCTTCCTATATTTCCA +
Preference number: 6 (lower is better)
Translates to: VSKKHVLVQGYP*AAKAQCLPIFP
Trigger: TGGAAATATAGGAAGGCATTGAGCCTTGGCTGCCAAAGGGTAACCCTGCACAAGAACATGTTTCTTACTTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423724.5
ENST00000649521.1
CDS CAA 90 bp GTCTTTCTCCCAGGAAATGATGGCTCAGTGATCACGATGCTGTGTTaGCTTCACATTCAAGCAGATGACTCTTGCTCTATGATATTCAAA +
Preference number: 6 (lower is better)
Translates to: VFLPGNDGSVITMLC*LHIQADDSCSMIFK
Trigger: TTTGAATATCATAGAGCAAGAGTCATCTGCTTGAATGTGAAGCAAACACAGCATCGTGATCACTGAGCCATCATTTCCTGGGAGAAAGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426151.7
ENST00000649521.1
CDS TCA 72 bp GATCACGATGCTGTGTTTGCTTCACATTCAAGCAGATaGCTCTTGCTCTATGATATTCAAAGGGATGATCTC +
Preference number: 6 (lower is better)
Translates to: DHDAVFASHSSR*LLLYDIQRDDL
Trigger: GAGATCATCCCTTTGAATATCATAGAGCAAGAGTCATCTGCTTGAATGTGAAGCAAACACAGCATCGTGATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394441.5
ENST00000426151.7
ENST00000649521.1
CDS CCA 72 bp TCATCTTCTTTCGTCCTACGACGTAAAGAAATGGCTTaGGCTCTATTGTTGGATAGGTTTGATTTGAAAAGG +
Preference number: 6 (lower is better)
Translates to: SSSFVLRRKEMA*ALLLDRFDLKR
Trigger: CCTTTTCAAATCAAACCTATCCAACAATAGAGCCCAAGCCATTTCTTTACGTCGTAGGACGAAAGAAGATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394441.5
ENST00000415529.2
ENST00000423724.5
ENST00000426151.7
ENST00000649521.1