RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CALCOCO1 (Homo sapiens)

Ensembl gene IDs: ENSG00000012822

Ensembl transcript IDs: ENST00000262059.8, ENST00000430117.6, ENST00000546443.5, ENST00000546619.5, ENST00000546774.1, ENST00000547885.5, ENST00000547949.6, ENST00000547988.5, ENST00000548177.5, ENST00000548263.5, ENST00000548431.1, ENST00000549173.5, ENST00000549349.5, ENST00000549613.1, ENST00000549688.1, ENST00000549784.5, ENST00000549935.6, ENST00000550804.6, ENST00000551900.5, ENST00000552282.1, ENST00000552623.5, ENST00000553154.5

Found 969 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ACCCACTCATGGCCAGCACACCAGGAGGCACGACAGGACAGTAACTaGCCAGCATCCCCTGCCATGAGGCAGGGATGCGTCCCCTCTTTC +
Preference number: 1 (lower is better)
Translates to: THSWPAHQEARQDSN*PASPAMRQGCVPSF
Trigger: GAAAGAGGGGACGCATCCCTGCCTCATGGCAGGGGATGCTGGGCAGTTACTGTCCTGTCGTGCCTCCTGGTGTGCTGGCCATGAGTGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
3UTR CCA 90 bp AGTGTCTGTATCAGTGGCCTTGTGCAGCTAGCCATGTGGCTCCTGTaGGTGTATGTGCGGCTTGGCAGGGGCTGTGGCATGGGAGCAGGG +
Preference number: 1 (lower is better)
Translates to: SVCISGLVQLAMWLL*VYVRLGRGCGMGAG
Trigger: CCCTGCTCCCATGCCACAGCCCCTGCCAAGCCGCACATACACCCACAGGAGCCACATGGCTAGCTGCACAAGGCCACTGATACAGACACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
3UTR TCA 90 bp AGACAGAGGGGAAAGGGAGAGGGTCGGCGTGCTCTGTTCCCTTCTTaGCTTGCAGACTTCGGAGAGCAGGACCCATGTGCCTGGGTTCCC +
Preference number: 1 (lower is better)
Translates to: RQRGKGEGRRALFPS*LADFGEQDPCAWVP
Trigger: GGGAACCCAGGCACATGGGTCCTGCTCTCCGAAGTCTGCAAGTCAAGAAGGGAACAGAGCACGCCGACCCTCTCCCTTTCCCCTCTGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548263.5
3UTR GCA 90 bp CTTCGGAGAGCAGGACCCATGTGCCTGGGTTCCCAGGTTATCCTGTaGCTAATGCAGCATCCTGGCCTCTCCCACAGCGTCTTTCTCCCC +
Preference number: 1 (lower is better)
Translates to: LRRAGPMCLGSQVIL*LMQHPGLSHSVFLP
Trigger: GGGGAGAAAGACGCTGTGGGAGAGGCCAGGATGCTGCATTAGGCACAGGATAACCTGGGAACCCAGGCACATGGGTCCTGCTCTCCGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548263.5
3UTR GCA 90 bp GAGGGGAAAGGGAGAGGGTCGGCGTGCTCTGTTCCCTTCTTGACTTaGAGACTTCGGAGAGCAGGACCCATGTGCCTGGGTTCCCAGGTT +
Preference number: 1 (lower is better)
Translates to: EGKGRGSACSVPFLT*RLRRAGPMCLGSQV
Trigger: AACCTGGGAACCCAGGCACATGGGTCCTGCTCTCCGAAGTCTGCAAGTCAAGAAGGGAACAGAGCACGCCGACCCTCTCCCTTTCCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548263.5
3UTR CCA 90 bp AGCCATGTGGCTCCTGTGGGTGTATGTGCGGCTTGGCAGGGGCTGTaGCATGGGAGCAGGGGCCTGGGTTCCTGTTTGTCTACTATTCTC +
Preference number: 1 (lower is better)
Translates to: SHVAPVGVCAAWQGL*HGSRGLGSCLSTIL
Trigger: GAGAATAGTAGACAAACAGGAACCCAGGCCCCTGCTCCCATGCCACAGCCCCTGCCAAGCCGCACATACACCCACAGGAGCCACATGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
3UTR TCA 90 bp TTGCTCCCTCCCCAACTGCCGCATTATCCAAGCCAGACTCCCACTTaGGACAACCCACTCATGGCCAGCACACCAGGAGGCACGACAGGA +
Preference number: 1 (lower is better)
Translates to: LLPPQLPHYPSQTPT*DNPLMASTPGGTTG
Trigger: TCCTGTCGTGCCTCCTGGTGTGCTGGCCATGAGTGGGTTGTCTCAAGTGGGAGTCTGGCTTGGATAATGCGGCAGTTGGGGAGGGAGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
3UTR GCA 90 bp GAGAAGGGAGCTATTGGGTTGGAGGACGAGGGGGTTGTAGGCATGTaGTTGTGCAGGCCATTGCTGAGAGCCTTGGTGAGCGTGCAGGTC +
Preference number: 1 (lower is better)
Translates to: EKGAIGLEDEGVVGM*LCRPLLRALVSVQV
Trigger: GACCTGCACGCTCACCAAGGCTCTCAGCAATGGCCTGCACAAGCACATGCCTACAACCCCCTCGTCCTCCAACCCAATAGCTCCCTTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
3UTR GCA 90 bp GGAGCTATTGGGTTGGAGGACGAGGGGGTTGTAGGCATGTGCTTGTaGAGGCCATTGCTGAGAGCCTTGGTGAGCGTGCAGGTCCTTAAC +
Preference number: 1 (lower is better)
Translates to: GAIGLEDEGVVGMCL*RPLLRALVSVQVLN
Trigger: GTTAAGGACCTGCACGCTCACCAAGGCTCTCAGCAATGGCCTGCACAAGCACATGCCTACAACCCCCTCGTCCTCCAACCCAATAGCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
3UTR GCA 90 bp CATTTCAGTTGTAGCCAGATGGATGCTGGATCCCAGTCTTCTCTCTaGTCCTATCCCTGGGGGCCATGGTCACCTCCCTTCCTCCCCGGA +
Preference number: 1 (lower is better)
Translates to: HFSCSQMDAGSQSSL*SYPWGPWSPPFLPG
Trigger: TCCGGGGAGGAAGGGAGGTGACCATGGCCCCCAGGGATAGGAGCAGAGAGAAGACTGGGATCCAGCATCCATCTGGCTACAACTGAAATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000548263.5
3UTR CCA 90 bp TGCCGCATTATCCAAGCCAGACTCCCACTTGAGACAACCCACTCATaGCCAGCACACCAGGAGGCACGACAGGACAGTAACTGCCCAGCA +
Preference number: 1 (lower is better)
Translates to: CRIIQARLPLETTHS*PAHQEARQDSNCPA
Trigger: TGCTGGGCAGTTACTGTCCTGTCGTGCCTCCTGGTGTGCTGGCCATGAGTGGGTTGTCTCAAGTGGGAGTCTGGCTTGGATAATGCGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
3UTR CCA 90 bp TGTGGCTCCTGTGGGTGTATGTGCGGCTTGGCAGGGGCTGTGGCATaGGAGCAGGGGCCTGGGTTCCTGTTTGTCTACTATTCTCCTTTT +
Preference number: 1 (lower is better)
Translates to: CGSCGCMCGLAGAVA*EQGPGFLFVYYSPF
Trigger: AAAAGGAGAATAGTAGACAAACAGGAACCCAGGCCCCTGCTCCCATGCCACAGCCCCTGCCAAGCCGCACATACACCCACAGGAGCCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
3UTR CCA 90 bp CATGTGCCTGGGTTCCCAGGTTATCCTGTGCCTAATGCAGCATCCTaGCCTCTCCCACAGCGTCTTTCTCCCCACAATCCTGGAAGGCTT +
Preference number: 1 (lower is better)
Translates to: HVPGFPGYPVPNAAS*PLPQRLSPHNPGRL
Trigger: AAGCCTTCCAGGATTGTGGGGAGAAAGACGCTGTGGGAGAGGCCAGGATGCTGCATTAGGCACAGGATAACCTGGGAACCCAGGCACATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548263.5
3UTR TCA 90 bp TTTCCATGGCATGCACCCACCCTGGGACTAAACCCTGAGCAGAAGTaGCAGGGACCCATGAGTTTGCTCCCTCCCCAACTGCCGCATTAT +
Preference number: 1 (lower is better)
Translates to: FPWHAPTLGLNPEQK*QGPMSLLPPQLPHY
Trigger: ATAATGCGGCAGTTGGGGAGGGAGCAAACTCATGGGTCCCTGTCACTTCTGCTCAGGGTTTAGTCCCAGGGTGGGTGCATGCCATGGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
3UTR TCA 90 bp TTGTCCCACTTTTCCATGGCATGCACCCACCCTGGGACTAAACCCTaGGCAGAAGTGACAGGGACCCATGAGTTTGCTCCCTCCCCAACT +
Preference number: 1 (lower is better)
Translates to: LSHFSMACTHPGTKP*AEVTGTHEFAPSPT
Trigger: AGTTGGGGAGGGAGCAAACTCATGGGTCCCTGTCACTTCTGCTCAGGGTTTAGTCCCAGGGTGGGTGCATGCCATGGAAAAGTGGGACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
3UTR GCA 90 bp TCTGTTCCCTTCTTGACTTGCAGACTTCGGAGAGCAGGACCCATGTaGCTGGGTTCCCAGGTTATCCTGTGCCTAATGCAGCATCCTGGC +
Preference number: 1 (lower is better)
Translates to: SVPFLTCRLRRAGPM*LGSQVILCLMQHPG
Trigger: GCCAGGATGCTGCATTAGGCACAGGATAACCTGGGAACCCAGGCACATGGGTCCTGCTCTCCGAAGTCTGCAAGTCAAGAAGGGAACAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548263.5
3UTR CCA 90 bp AAGGTGAAGGGGTCCTGGGTGCTGAAAAAGAAGTGTCCATCCATGTaGTCCTCCAGGGCATCCTTGTCACTCTCAGCAGGAAAGCGCTCC +
Preference number: 1 (lower is better)
Translates to: KVKGSWVLKKKCPSM*SSRASLSLSAGKRS
Trigger: GGAGCGCTTTCCTGCTGAGAGTGACAAGGATGCCCTGGAGGACCACATGGATGGACACTTCTTTTTCAGCACCCAGGACCCCTTCACCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000548263.5
3UTR GCA 90 bp TGCCGTCAATTACCCTTCCTTGAGCCCCCTCTGTGTCGGGGACCATaGTTTGGATACTGGGATAGGCAAACCATGAGTAAGGAAGAGAAA +
Preference number: 1 (lower is better)
Translates to: CRQLPFLEPPLCRGP*FGYWDRQTMSKEEK
Trigger: TTTCTCTTCCTTACTCATGGTTTGCCTATCCCAGTATCCAAAGCATGGTCCCCGACACAGAGGGGGCTCAAGGAAGGGTAATTGACGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
3UTR TCA 90 bp AGCCTGTCCTTTGGCATAAGGTACAGTGATGGCTGCTATGAAGGGTaGAGTTCTCGGCAGTGGGAAACTTGTCCCACTTTTCCATGGCAT +
Preference number: 1 (lower is better)
Translates to: SLSFGIRYSDGCYEG*SSRQWETCPTFPWH
Trigger: ATGCCATGGAAAAGTGGGACAAGTTTCCCACTGCCGAGAACTTCACCCTTCATAGCAGCCATCACTGTACCTTATGCCAAAGGACAGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
3UTR CCA 90 bp GTTCTGTTATACTGGAGTACAGGGTTCCTTAGGGTAGATGGGAAATaGAAGGGCAAGTTGGGACAGATGGTGAAGACCCTGACTGGCACA +
Preference number: 1 (lower is better)
Translates to: VLLYWSTGFLRVDGK*KGKLGQMVKTLTGT
Trigger: TGTGCCAGTCAGGGTCTTCACCATCTGTCCCAACTTGCCCTTCCATTTCCCATCTACCCTAAGGAACCCTGTACTCCAGTATAACAGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
3UTR TCA 90 bp GTGGGGGAGTGGTGTGTTTGGATTCGTTCTTTCACCACCAAATACTaGCGCGAGTTCCTATTTGCTGCTACTTGGCTGACATCTCCTTTC +
Preference number: 1 (lower is better)
Translates to: VGEWCVWIRSFTTKY*REFLFAATWLTSPF
Trigger: GAAAGGAGATGTCAGCCAAGTAGCAGCAAATAGGAACTCGCGTCAGTATTTGGTGGTGAAAGAACGAATCCAAACACACCACTCCCCCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
3UTR CCA 90 bp TGGGAAATGGAAGGGCAAGTTGGGACAGATGGTGAAGACCCTGACTaGCACACTAAGCAATCTACATTTCTCATTCCTGTAGGTAACAGG +
Preference number: 1 (lower is better)
Translates to: WEMEGQVGTDGEDPD*HTKQSTFLIPVGNR
Trigger: CCTGTTACCTACAGGAATGAGAAATGTAGATTGCTTAGTGTGCCAGTCAGGGTCTTCACCATCTGTCCCAACTTGCCCTTCCATTTCCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
3UTR CCA 90 bp TGGCACACTAAGCAATCTACATTTCTCATTCCTGTAGGTAACAGGTaGCCATTGAGGTTCGATAAGTGGGGGAGTGGTGTGTTTGGATTC +
Preference number: 1 (lower is better)
Translates to: WHTKQSTFLIPVGNR*PLRFDKWGSGVFGF
Trigger: GAATCCAAACACACCACTCCCCCACTTATCGAACCTCAATGGCCACCTGTTACCTACAGGAATGAGAAATGTAGATTGCTTAGTGTGCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
3UTR GCA 90 bp GATTCGTTCTTTCACCACCAAATACTGACGCGAGTTCCTATTTGCTaGTACTTGGCTGACATCTCCTTTCACATTAGAGTCTCAAGCCCA +
Preference number: 1 (lower is better)
Translates to: DSFFHHQILTRVPIC*YLADISFHIRVSSP
Trigger: TGGGCTTGAGACTCTAATGTGAAAGGAGATGTCAGCCAAGTAGCAGCAAATAGGAACTCGCGTCAGTATTTGGTGGTGAAAGAACGAATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
3UTR CCA 90 bp TTTCTCATTCCTGTAGGTAACAGGTGGCCATTGAGGTTCGATAAGTaGGGGAGTGGTGTGTTTGGATTCGTTCTTTCACCACCAAATACT +
Preference number: 1 (lower is better)
Translates to: FLIPVGNRWPLRFDK*GSGVFGFVLSPPNT
Trigger: AGTATTTGGTGGTGAAAGAACGAATCCAAACACACCACTCCCCCACTTATCGAACCTCAATGGCCACCTGTTACCTACAGGAATGAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
3UTR GCA 90 bp TTGGATTCGTTCTTTCACCACCAAATACTGACGCGAGTTCCTATTTaGTGCTACTTGGCTGACATCTCCTTTCACATTAGAGTCTCAAGC +
Preference number: 1 (lower is better)
Translates to: LDSFFHHQILTRVPI*CYLADISFHIRVSS
Trigger: GCTTGAGACTCTAATGTGAAAGGAGATGTCAGCCAAGTAGCAGCAAATAGGAACTCGCGTCAGTATTTGGTGGTGAAAGAACGAATCCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
3UTR CAA 90 bp AGAGGGGAAAGGGAGAGGGTCGGCGTGCTCTGTTCCCTTCTTGACTaGCAGACTTCGGAGAGCAGGACCCATGTGCCTGGGTTCCCAGGT +
Preference number: 2 (lower is better)
Translates to: RGERERVGVLCSLLD*QTSESRTHVPGFPG
Trigger: ACCTGGGAACCCAGGCACATGGGTCCTGCTCTCCGAAGTCTGCAAGTCAAGAAGGGAACAGAGCACGCCGACCCTCTCCCTTTCCCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548263.5
3UTR CAA 90 bp GAGACAGAGGGGAAAGGGAGAGGGTCGGCGTGCTCTGTTCCCTTCTaGACTTGCAGACTTCGGAGAGCAGGACCCATGTGCCTGGGTTCC +
Preference number: 2 (lower is better)
Translates to: ETEGKGRGSACSVPF*TCRLRRAGPMCLGS
Trigger: GGAACCCAGGCACATGGGTCCTGCTCTCCGAAGTCTGCAAGTCAAGAAGGGAACAGAGCACGCCGACCCTCTCCCTTTCCCCTCTGTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548263.5
3UTR-3UTR TCA 90 bp TTGAGCCCCCTCTGTGTCGGGGACCATGCTTTGGATACTGGGATAGGCAAACCACAGCATCCCCTGCCATaGGGCAGGGATGCGTCCCCT +
Preference number: 2 (lower is better)
Translates to: LSPLCVGDHALDTGIGKPQHPLP*GRDASP
Trigger: AGGGGACGCATCCCTGCCTCATGGCAGGGGATGCTG...TGGTTTGCCTATCCCAGTATCCAAAGCATGGTCCCCGACACAGAGGGGGCTCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
3UTR CAA 90 bp TTTGCTCCCTCCCCAACTGCCGCATTATCCAAGCCAGACTCCCACTaGAGACAACCCACTCATGGCCAGCACACCAGGAGGCACGACAGG +
Preference number: 2 (lower is better)
Translates to: FAPSPTAALSKPDSH*RQPTHGQHTRRHDR
Trigger: CCTGTCGTGCCTCCTGGTGTGCTGGCCATGAGTGGGTTGTCTCAAGTGGGAGTCTGGCTTGGATAATGCGGCAGTTGGGGAGGGAGCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
3UTR-3UTR GCA 90 bp TTGAGCCCCCTCTGTGTCGGGGACCATGCTTTGGATACTGGGATAGGCAAACCACTGCCCAGCATCCCCTaGCATGAGGCAGGGATGCGT +
Preference number: 2 (lower is better)
Translates to: LSPLCVGDHALDTGIGKPLPSIP*HEAGMR
Trigger: ACGCATCCCTGCCTCATGGCAGGGGATGCTGGGCAG...TGGTTTGCCTATCCCAGTATCCAAAGCATGGTCCCCGACACAGAGGGGGCTCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
3UTR-3UTR GCA 90 bp GCCATGTGGCTCCTGTGGGTGTATGTGCGGCTTGGCAGGGGCTGTGGCATGGGACACTTTTCCATGGCATaGACCCACCCTGGGACTAAA +
Preference number: 2 (lower is better)
Translates to: AMWLLWVYVRLGRGCGMGHFSMA*THPGTK
Trigger: TTTAGTCCCAGGGTGGGTGCATGCCATGGAAAAGTG...TCCCATGCCACAGCCCCTGCCAAGCCGCACATACACCCACAGGAGCCACATGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
3UTR-3UTR GCA 90 bp AGAGAGGGTAGGGTGCCCCAGGAATTGGCTTTGGGGCATCAGACAAGGGAGTGTGCATCACCCCCTCCCTaGCCTGAGCCCATCTCACAT +
Preference number: 2 (lower is better)
Translates to: REGRVPQELALGHQTRECASPPP*PEPISH
Trigger: ATGTGAGATGGGCTCAGGGCAGGGAGGGGGTGATGC...ACACTCCCTTGTCTGATGCCCCAAAGCCAATTCCTGGGGCACCCTACCCTCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000548263.5
3UTR CAA 90 bp AAGGGAGCTATTGGGTTGGAGGACGAGGGGGTTGTAGGCATGTGCTaGTGCAGGCCATTGCTGAGAGCCTTGGTGAGCGTGCAGGTCCTT +
Preference number: 2 (lower is better)
Translates to: KGAIGLEDEGVVGMC*CRPLLRALVSVQVL
Trigger: AAGGACCTGCACGCTCACCAAGGCTCTCAGCAATGGCCTGCACAAGCACATGCCTACAACCCCCTCGTCCTCCAACCCAATAGCTCCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
3UTR-3UTR TCA 90 bp CTCAAAGGTGAAGGGGTCCTGGGTGCTGAAAAAGAAGTGTCCATCCATGTGGTCGGGAGCAGGGCCTGGTaGCTGTCCACACAGATGCCC +
Preference number: 2 (lower is better)
Translates to: LKGEGVLGAEKEVSIHVVGSRAW*LSTQMP
Trigger: GGGCATCTGTGTGGACAGTCACCAGGCCCTGCTCCC...GACCACATGGATGGACACTTCTTTTTCAGCACCCAGGACCCCTTCACCTTTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000548263.5
3UTR-3UTR GCA 90 bp GCCCATTCAGATCTATCGGCTTTTGCATGGATGCTGGGGAGCAGGGAGGAAAGGGCCATGAGGCAGGGATaGGTCCCCTCTTTCCCTCCT +
Preference number: 2 (lower is better)
Translates to: AHSDLSAFAWMLGSREERAMRQG*VPSFPP
Trigger: AGGAGGGAAAGAGGGGACGCATCCCTGCCTCATGGC...CCTTTCCTCCCTGCTCCCCAGCATCCATGCAAAAGCCGATAGATCTGAATGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
3UTR-3UTR GCA 90 bp GGGTTCCCAGGTTATCCTGTGCCTAATGCAGCATCCTGGCCTCTCCCACAGCGTTCTCTTCCCTGTGCCTaGCCCCTTGAACCTGGGAAT +
Preference number: 2 (lower is better)
Translates to: GFPGYPVPNAASWPLPQRSLPCA*PLEPGN
Trigger: ATTCCCAGGTTCAAGGGGGCAGGCACAGGGAAGAGA...ACGCTGTGGGAGAGGCCAGGATGCTGCATTAGGCACAGGATAACCTGGGAACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548263.5
3UTR-3UTR GCA 90 bp ACTTGTCCCACTTTTCCATGGCATGCACCCACCCTGGGACTAAACCCTGAGCAGCGACAGGACAGTAACTaGCCAGCATCCCCTGCCATG +
Preference number: 2 (lower is better)
Translates to: TCPTFPWHAPTLGLNPEQRQDSN*PASPAM
Trigger: CATGGCAGGGGATGCTGGGCAGTTACTGTCCTGTCG...CTGCTCAGGGTTTAGTCCCAGGGTGGGTGCATGCCATGGAAAAGTGGGACAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
3UTR-3UTR GCA 90 bp GAGCCCCCTCTGTGTCGGGGACCATGCTTTGGATACTGGGATAGGCAAACCATGTGCTCCCTCCCCAACTaGCGCATTATCCAAGCCAGA +
Preference number: 2 (lower is better)
Translates to: EPPLCRGPCFGYWDRQTMCSLPN*RIIQAR
Trigger: TCTGGCTTGGATAATGCGGCAGTTGGGGAGGGAGCA...CATGGTTTGCCTATCCCAGTATCCAAAGCATGGTCCCCGACACAGAGGGGGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
3UTR-3UTR GCA 90 bp GAGCCCCCTCTGTGTCGGGGACCATGCTTTGGATACTGGGATAGGCAAACCATGGTAGGCATGTGCTTGTaGAGGCCATTGCTGAGAGCC +
Preference number: 2 (lower is better)
Translates to: EPPLCRGPCFGYWDRQTMVGMCL*RPLLRA
Trigger: GGCTCTCAGCAATGGCCTGCACAAGCACATGCCTAC...CATGGTTTGCCTATCCCAGTATCCAAAGCATGGTCCCCGACACAGAGGGGGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
3UTR-3UTR CCA 90 bp AGAGAGGGTAGGGTGCCCCAGGAATTGGCTTTGGGGCATCAGACAAGGGAGTGTGGGTGCCCCAGGAATTaGCTTTGGGGCATCAGACAA +
Preference number: 2 (lower is better)
Translates to: REGRVPQELALGHQTRECGCPRN*LWGIRQ
Trigger: TTGTCTGATGCCCCAAAGCCAATTCCTGGGGCACCC...ACACTCCCTTGTCTGATGCCCCAAAGCCAATTCCTGGGGCACCCTACCCTCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000546443.5
ENST00000548263.5
ENST00000550804.6
3UTR-3UTR CCA 90 bp AGGGTGCCCCAGGAATTGGCTTTGGGGCATCAGACAAGGGAGTGTGAGTGTGAGTGTCCCACTTTTCCATaGCATGCACCCACCCTGGGA +
Preference number: 2 (lower is better)
Translates to: RVPQELALGHQTRECECECPTFP*HAPTLG
Trigger: TCCCAGGGTGGGTGCATGCCATGGAAAAGTGGGACA...CTCACACTCACACTCCCTTGTCTGATGCCCCAAAGCCAATTCCTGGGGCACCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
3UTR-3UTR CCA 90 bp GCCCATTCAGATCTATCGGCTTTTGCATGGATGCTGGGGAGCAGGGAGGAAAGGGGAAGCCAGGAGGTGTaGGTCCCAGATTCTTCTCGC +
Preference number: 2 (lower is better)
Translates to: AHSDLSAFAWMLGSREERGSQEV*VPDSSR
Trigger: GCGAGAAGAATCTGGGACCCACACCTCCTGGCTTCC...CCTTTCCTCCCTGCTCCCCAGCATCCATGCAAAAGCCGATAGATCTGAATGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
3UTR CAA 90 bp GGGTTGGAGGACGAGGGGGTTGTAGGCATGTGCTTGTGCAGGCCATaGCTGAGAGCCTTGGTGAGCGTGCAGGTCCTTAACAAATGCTTT +
Preference number: 2 (lower is better)
Translates to: GLEDEGVVGMCLCRP*LRALVSVQVLNKCF
Trigger: AAAGCATTTGTTAAGGACCTGCACGCTCACCAAGGCTCTCAGCAATGGCCTGCACAAGCACATGCCTACAACCCCCTCGTCCTCCAACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
3UTR-3UTR TCA 90 bp GCCCATTCAGATCTATCGGCTTTTGCATGGATGCTGGGGAGCAGGGAGGAAAGGGTGGCACCCCCAGTCTaGAACTGCAAATTGCATGCC +
Preference number: 2 (lower is better)
Translates to: AHSDLSAFAWMLGSREERVAPPV*NCKLHA
Trigger: GGCATGCAATTTGCAGTTTCAGACTGGGGGTGCCAC...CCTTTCCTCCCTGCTCCCCAGCATCCATGCAAAAGCCGATAGATCTGAATGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
3UTR-3UTR GCA 90 bp AGAGAGGGTAGGGTGCCCCAGGAATTGGCTTTGGGGCATCAGACAAGGGAGTGTTCCCAGGTTATCCTGTaGCTAATGCAGCATCCTGGC +
Preference number: 2 (lower is better)
Translates to: REGRVPQELALGHQTRECSQVIL*LMQHPG
Trigger: GCCAGGATGCTGCATTAGGCACAGGATAACCTGGGA...ACACTCCCTTGTCTGATGCCCCAAAGCCAATTCCTGGGGCACCCTACCCTCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548263.5
3UTR-3UTR CCA 90 bp AGGGTGCCCCAGGAATTGGCTTTGGGGCATCAGACAAGGGAGTGTGAGTGTGAGTGGAAAAGGCTAGGGTaGGGCACAGAAGTCAATGGG +
Preference number: 2 (lower is better)
Translates to: RVPQELALGHQTRECECEWKRLG*GTEVNG
Trigger: CCCATTGACTTCTGTGCCCCACCCTAGCCTTTTCCA...CTCACACTCACACTCCCTTGTCTGATGCCCCAAAGCCAATTCCTGGGGCACCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000546443.5
ENST00000548263.5
ENST00000550804.6
3UTR-3UTR CCA 90 bp AGGGTGCCCCAGGAATTGGCTTTGGGGCATCAGACAAGGGAGTGTGAGTGTGAGAAGCTTTTATTGCTGTaGGGGGACCTGGAGAGGGAG +
Preference number: 2 (lower is better)
Translates to: RVPQELALGHQTRECECEKLLLL*GDLERE
Trigger: CTCCCTCTCCAGGTCCCCCCACAGCAATAAAAGCTT...CTCACACTCACACTCCCTTGTCTGATGCCCCAAAGCCAATTCCTGGGGCACCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000546443.5
ENST00000548263.5
ENST00000550804.6
3UTR-3UTR CCA 90 bp GAGCCCCCTCTGTGTCGGGGACCATGCTTTGGATACTGGGATAGGCAAACCATGAATGGAGAAAGGGAATaGTGGGGGTGGTCCACACAG +
Preference number: 2 (lower is better)
Translates to: EPPLCRGPCFGYWDRQTMNGERE*WGWSTQ
Trigger: CTGTGTGGACCACCCCCACCATTCCCTTTCTCCATT...CATGGTTTGCCTATCCCAGTATCCAAAGCATGGTCCCCGACACAGAGGGGGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
3UTR-3UTR CCA 90 bp GCCCATTCAGATCTATCGGCTTTTGCATGGATGCTGGGGAGCAGGGAGGAAAGGAAGAAGTCATCCAGGTaGGGCTGGAAAGGGGGTGGA +
Preference number: 2 (lower is better)
Translates to: AHSDLSAFAWMLGSREERKKSSR*GWKGGG
Trigger: TCCACCCCCTTTCCAGCCCCACCTGGATGACTTCTT...CCTTTCCTCCCTGCTCCCCAGCATCCATGCAAAAGCCGATAGATCTGAATGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
3UTR-3UTR TCA 90 bp TGCAGTGGCTGTGTATCAGAAGCAACCAGGGCTAGGAGTGGACGATTCTATTCCAGCCAGACTCCCACTTaGGACAACCCACTCATGGCC +
Preference number: 2 (lower is better)
Translates to: CSGCVSEATRARSGRFYSSQTPT*DNPLMA
Trigger: GGCCATGAGTGGGTTGTCTCAAGTGGGAGTCTGGCT...GGAATAGAATCGTCCACTCCTAGCCCTGGTTGCTTCTGATACACAGCCACTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
3UTR-3UTR TCA 90 bp GTCCTCCAGGGCATCCTTGTCACTCTCAGCAGGAAAGCGCTCCTTACAGATAGGGGGGTAGGGATTACCTaGAGGCATCTGGGATTTGGA +
Preference number: 2 (lower is better)
Translates to: VLQGILVTLSRKALLTDRGVGIT*RHLGFG
Trigger: TCCAAATCCCAGATGCCTTCAGGTAATCCCTACCCC...CCTATCTGTAAGGAGCGCTTTCCTGCTGAGAGTGACAAGGATGCCCTGGAGGAC
54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000548263.5
3UTR-3UTR TCA 90 bp AGACTTCGGAGAGCAGGACCCATGTGCCTGGGTTCCCAGGTTATCCTGTGCCTAGGACAATCTGATACCTaGAACCCCCACCTCTATAGG +
Preference number: 2 (lower is better)
Translates to: RLRRAGPMCLGSQVILCLGQSDT*NPHLYR
Trigger: CCTATAGAGGTGGGGGTTTCAGGTATCAGATTGTCC...TAGGCACAGGATAACCTGGGAACCCAGGCACATGGGTCCTGCTCTCCGAAGTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548263.5
3UTR-3UTR TCA 90 bp ACGATTCTATTCCCACAGGGGAAGGCCTCCTCCATCCCGGTTCCTCCAAAACCACAGAAGGGGACAATCTaGTACCTGAAACCCCCACCT +
Preference number: 2 (lower is better)
Translates to: TILFPQGKASSIPVPPKPQKGTI*YLKPPP
Trigger: AGGTGGGGGTTTCAGGTATCAGATTGTCCCCTTCTG...TGGTTTTGGAGGAACCGGGATGGAGGAGGCCTTCCCCTGTGGGAATAGAATCGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000548263.5
3UTR-3UTR GCA 90 bp CGATTCTATTCCCACAGGGGAAGGCCTCCTCCATCCCGGTTCCTCCAAAACCACGATAAATTCAGCCACTaGTTCCGAACAGGACCCCTC +
Preference number: 2 (lower is better)
Translates to: RFYSHRGRPPPSRFLQNHDKFSH*FRTGPL
Trigger: GAGGGGTCCTGTTCGGAAGCAGTGGCTGAATTTATC...GTGGTTTTGGAGGAACCGGGATGGAGGAGGCCTTCCCCTGTGGGAATAGAATCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000546443.5
ENST00000548263.5
ENST00000550804.6
3UTR-3UTR GCA 90 bp TGCAGTGGCTGTGTATCAGAAGCAACCAGGGCTAGGAGTGGACGATTCTATTCCCGACAGGACAGTAACTaGCCAGCATCCCCTGCCATG +
Preference number: 2 (lower is better)
Translates to: CSGCVSEATRARSGRFYSRQDSN*PASPAM
Trigger: CATGGCAGGGGATGCTGGGCAGTTACTGTCCTGTCG...GGAATAGAATCGTCCACTCCTAGCCCTGGTTGCTTCTGATACACAGCCACTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
3UTR-3UTR CCA 90 bp TGCAGCATCCTGGCCTCTCCCACAGCGTCTTTCTCCCCACAATCCTGGAAGGCTAGTGTGTGTGTGCAGTaGCTGTGTATCAGAAGCAAC +
Preference number: 2 (lower is better)
Translates to: CSILASPTASFSPQSWKASVCVQ*LCIRSN
Trigger: GTTGCTTCTGATACACAGCCACTGCACACACACACT...AGCCTTCCAGGATTGTGGGGAGAAAGACGCTGTGGGAGAGGCCAGGATGCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548263.5
3UTR-3UTR CCA 90 bp ACGATTCTATTCCCACAGGGGAAGGCCTCCTCCATCCCGGTTCCTCCAAAACCATGGAAAAGGCTAGGGTaGGGCACAGAAGTCAATGGG +
Preference number: 2 (lower is better)
Translates to: TILFPQGKASSIPVPPKPWKRLG*GTEVNG
Trigger: CCCATTGACTTCTGTGCCCCACCCTAGCCTTTTCCA...TGGTTTTGGAGGAACCGGGATGGAGGAGGCCTTCCCCTGTGGGAATAGAATCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000546443.5
ENST00000548263.5
ENST00000550804.6
3UTR-3UTR CCA 90 bp GCCCATTCAGATCTATCGGCTTTTGCATGGATGCTGGGGAGCAGGGAGGAAAGGAAGCTTTTATTGCTGTaGGGGGACCTGGAGAGGGAG +
Preference number: 2 (lower is better)
Translates to: AHSDLSAFAWMLGSREERKLLLL*GDLERE
Trigger: CTCCCTCTCCAGGTCCCCCCACAGCAATAAAAGCTT...CCTTTCCTCCCTGCTCCCCAGCATCCATGCAAAAGCCGATAGATCTGAATGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
3UTR-3UTR CCA 90 bp TGCAGTGGCTGTGTATCAGAAGCAACCAGGGCTAGGAGTGGACGATTCTATTCCCCAGGGTCTAAGAGCTaGAGGTCTGGGCCCTGTGTT +
Preference number: 2 (lower is better)
Translates to: CSGCVSEATRARSGRFYSPGSKS*RSGPCV
Trigger: AACACAGGGCCCAGACCTCCAGCTCTTAGACCCTGG...GGAATAGAATCGTCCACTCCTAGCCCTGGTTGCTTCTGATACACAGCCACTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
3UTR-3UTR CCA 90 bp GGTACAGTGATGGCTGCTATGAAGGGTGAAGTTCTCGGCAGTGGGAAACTTGTCGAGACAACCCACTCATaGCCAGCACACCAGGAGGCA +
Preference number: 2 (lower is better)
Translates to: GTVMAAMKGEVLGSGKLVETTHS*PAHQEA
Trigger: TGCCTCCTGGTGTGCTGGCCATGAGTGGGTTGTCTC...GACAAGTTTCCCACTGCCGAGAACTTCACCCTTCATAGCAGCCATCACTGTACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
3UTR-3UTR CCA 90 bp AAAACTCAGGTAAACCAACGGAAACTCCAAATAAGAGAGGGTAGGGTGCCCCAGCTCTGCTCCTATCCCTaGGGGCCATGGTCACCTCCC +
Preference number: 2 (lower is better)
Translates to: KTQVNQRKLQIREGRVPQLCSYP*GPWSPP
Trigger: GGGAGGTGACCATGGCCCCCAGGGATAGGAGCAGAG...CTGGGGCACCCTACCCTCTCTTATTTGGAGTTTCCGTTGGTTTACCTGAGTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000548263.5
3UTR CAA 90 bp CGGAAACTCCAAATAAGAGAGGGTAGGGTGCCCCAGGAATTGGCTTaGGGGCATCAGACAAGGGAGTGTGAGTGTGAGTGTGTGTGTGCA +
Preference number: 2 (lower is better)
Translates to: RKLQIREGRVPQELA*GHQTRECECECVCA
Trigger: TGCACACACACACTCACACTCACACTCCCTTGTCTGATGCCCCAAAGCCAATTCCTGGGGCACCCTACCCTCTCTTATTTGGAGTTTCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000546443.5
ENST00000548263.5
ENST00000550804.6
3UTR CAA 90 bp GAGGGGGTTGTAGGCATGTGCTTGTGCAGGCCATTGCTGAGAGCCTaGGTGAGCGTGCAGGTCCTTAACAAATGCTTTACGATGCTGTGT +
Preference number: 2 (lower is better)
Translates to: EGVVGMCLCRPLLRA*VSVQVLNKCFTMLC
Trigger: ACACAGCATCGTAAAGCATTTGTTAAGGACCTGCACGCTCACCAAGGCTCTCAGCAATGGCCTGCACAAGCACATGCCTACAACCCCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
3UTR-3UTR TCA 90 bp TTGGGGCATCAGACAAGGGAGTGTGAGTGTGAGTGTGTGTGTGCAGTGGCTGTGTGTCTGTCTAGCCTGTaGAGCTGGTTAGAGTGGATG +
Preference number: 2 (lower is better)
Translates to: LGHQTRECECECVCAVAVCLSSL*SWLEWM
Trigger: CATCCACTCTAACCAGCTTCACAGGCTAGACAGACA...CACAGCCACTGCACACACACACTCACACTCACACTCCCTTGTCTGATGCCCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
3UTR-3UTR TCA 90 bp TTGAGCCCCCTCTGTGTCGGGGACCATGCTTTGGATACTGGGATAGGCAAACCATGTCTGTCTAGCCTGTaGAGCTGGTTAGAGTGGATG +
Preference number: 2 (lower is better)
Translates to: LSPLCVGDHALDTGIGKPCLSSL*SWLEWM
Trigger: CATCCACTCTAACCAGCTTCACAGGCTAGACAGACA...TGGTTTGCCTATCCCAGTATCCAAAGCATGGTCCCCGACACAGAGGGGGCTCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
3UTR-3UTR TCA 90 bp AGTGGGGGAGTGGTGTGTTTGGATTCGTTCTTTCACCACCAAATACTGACGCGAGGAGAGGAGGGCAGCTaGGAAGGGAGCTATTGGGTT +
Preference number: 2 (lower is better)
Translates to: SGGVVCLDSFFHHQILTRGEEGS*EGSYWV
Trigger: AACCCAATAGCTCCCTTCTCAGCTGCCCTCCTCTCC...TCGCGTCAGTATTTGGTGGTGAAAGAACGAATCCAAACACACCACTCCCCCACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
3UTR-3UTR GCA 90 bp ACGATTCTATTCCCACAGGGGAAGGCCTCCTCCATCCCGGTTCCTCCAAAACCAGATAAATTCAGCCACTaGTTCCGAACAGGACCCCTC +
Preference number: 2 (lower is better)
Translates to: TILFPQGKASSIPVPPKPDKFSH*FRTGPL
Trigger: GAGGGGTCCTGTTCGGAAGCAGTGGCTGAATTTATC...TGGTTTTGGAGGAACCGGGATGGAGGAGGCCTTCCCCTGTGGGAATAGAATCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000546443.5
ENST00000548263.5
ENST00000550804.6
3UTR CAA 90 bp GTGCTGAAAAAGAAGTGTCCATCCATGTGGTCCTCCAGGGCATCCTaGTCACTCTCAGCAGGAAAGCGCTCCTTACAGATAGGACACTCC +
Preference number: 2 (lower is better)
Translates to: VLKKKCPSMWSSRAS*SLSAGKRSLQIGHS
Trigger: GGAGTGTCCTATCTGTAAGGAGCGCTTTCCTGCTGAGAGTGACAAGGATGCCCTGGAGGACCACATGGATGGACACTTCTTTTTCAGCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548263.5
3UTR-3UTR TCA 90 bp CCAGACTCCCACTTGAGACAACCCACTCATGGCCAGCACACCAGGAGGCACGACGATAGAAAATGGGCATaGAACCTAAGTGTATGCATG +
Preference number: 2 (lower is better)
Translates to: PDSHLRQPTHGQHTRRHDDRKWA*NLSVCM
Trigger: CATGCATACACTTAGGTTTCATGCCCATTTTCTATC...GTCGTGCCTCCTGGTGTGCTGGCCATGAGTGGGTTGTCTCAAGTGGGAGTCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
3UTR-3UTR TCA 90 bp AGGGTGCCCCAGGAATTGGCTTTGGGGCATCAGACAAGGGAGTGTGAGTGTGAGTTATTTCTTTCCATGTaGGGAGATGCGAGGAGAGGA +
Preference number: 2 (lower is better)
Translates to: RVPQELALGHQTRECECELFLSM*GDARRG
Trigger: TCCTCTCCTCGCATCTCCTCACATGGAAAGAAATAA...CTCACACTCACACTCCCTTGTCTGATGCCCCAAAGCCAATTCCTGGGGCACCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000546443.5
ENST00000548263.5
ENST00000550804.6
3UTR-3UTR GCA 90 bp ACGATTCTATTCCCACAGGGGAAGGCCTCCTCCATCCCGGTTCCTCCAAAACCATCCATCTCCGTCTGCTaGCTAATGAGGCTGAAAATG +
Preference number: 2 (lower is better)
Translates to: TILFPQGKASSIPVPPKPSISVC*LMRLKM
Trigger: CATTTTCAGCCTCATTAGGCAGCAGACGGAGATGGA...TGGTTTTGGAGGAACCGGGATGGAGGAGGCCTTCCCCTGTGGGAATAGAATCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000548263.5
3UTR-3UTR GCA 90 bp TGCAGTGGCTGTGTATCAGAAGCAACCAGGGCTAGGAGTGGACGATTCTATTCCCCCTCCATCTCCGTCTaGTGCCTAATGAGGCTGAAA +
Preference number: 2 (lower is better)
Translates to: CSGCVSEATRARSGRFYSPSISV*CLMRLK
Trigger: TTTCAGCCTCATTAGGCAGCAGACGGAGATGGAGGG...GGAATAGAATCGTCCACTCCTAGCCCTGGTTGCTTCTGATACACAGCCACTGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548263.5
3UTR-3UTR GCA 90 bp ATAAATTCAGCCACTGCTTCCGAACAGGACCCCTCCCTGGGACAAAAGAGCCAGCTCTTCTTTAGTCCCTaGTGGTCTCTGCAGTGCAGA +
Preference number: 2 (lower is better)
Translates to: INSATASEQDPSLGQKSQLFFSP*WSLQCR
Trigger: TCTGCACTGCAGAGACCAGCAGGGACTAAAGAAGAG...CTGGCTCTTTTGTCCCAGGGAGGGGTCCTGTTCGGAAGCAGTGGCTGAATTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548263.5
3UTR-3UTR CCA 90 bp TTGGGGCATCAGACAAGGGAGTGTGAGTGTGAGTGTGTGTGTGCAGTGGCTGTGAGTGTGTGTGTGCAGTaGCTGTGTATCAGAAGCAAC +
Preference number: 2 (lower is better)
Translates to: LGHQTRECECECVCAVAVSVCVQ*LCIRSN
Trigger: GTTGCTTCTGATACACAGCCACTGCACACACACACT...CACAGCCACTGCACACACACACTCACACTCACACTCCCTTGTCTGATGCCCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000546443.5
ENST00000548263.5
ENST00000550804.6
3UTR-3UTR CCA 90 bp AAACTGAGAACCAAAAGGGACCTGAGAGGCCATGATGTCCATGCTGCTGCCTCTCCCAGGAATTGGCTTTaGGGCATCAGACAAGGGAGT +
Preference number: 2 (lower is better)
Translates to: KLRTKRDLRGHDVHAAASPRNWL*GIRQGS
Trigger: ACTCCCTTGTCTGATGCCCCAAAGCCAATTCCTGGG...AGAGGCAGCAGCATGGACATCATGGCCTCTCAGGTCCCTTTTGGTTCTCAGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000546443.5
ENST00000548263.5
ENST00000550804.6
3UTR-3UTR CCA 90 bp ATGAAACTGAGAACCAAAAGGGACCTGAGAGGCCATGATGTCCATGCTGCTGCCCCCAGGAATTGGCTTTaGGGCATCAGACAAGGGAGT +
Preference number: 2 (lower is better)
Translates to: MKLRTKRDLRGHDVHAAAPRNWL*GIRQGS
Trigger: ACTCCCTTGTCTGATGCCCCAAAGCCAATTCCTGGG...GGCAGCAGCATGGACATCATGGCCTCTCAGGTCCCTTTTGGTTCTCAGTTTCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000546443.5
ENST00000548263.5
ENST00000550804.6
3UTR-3UTR CCA 90 bp AGTGGGGGAGTGGTGTGTTTGGATTCGTTCTTTCACCACCAAATACTGACGCGAGGGTGCCCCAGGAATTaGCTTTGGGGCATCAGACAA +
Preference number: 2 (lower is better)
Translates to: SGGVVCLDSFFHHQILTRGCPRN*LWGIRQ
Trigger: TTGTCTGATGCCCCAAAGCCAATTCCTGGGGCACCC...TCGCGTCAGTATTTGGTGGTGAAAGAACGAATCCAAACACACCACTCCCCCACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
3UTR-3UTR CCA 90 bp GAGCCCCCTCTGTGTCGGGGACCATGCTTTGGATACTGGGATAGGCAAACCATGAAATGCACCTCCTGCTaGGGATGTTGGCTCATAATT +
Preference number: 2 (lower is better)
Translates to: EPPLCRGPCFGYWDRQTMKCTSC*GCWLII
Trigger: AATTATGAGCCAACATCCCCAGCAGGAGGTGCATTT...CATGGTTTGCCTATCCCAGTATCCAAAGCATGGTCCCCGACACAGAGGGGGCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
3UTR-3UTR CCA 90 bp CTGACATCTCCTTTCACATTAGAGTCTCAAGCCCATTCAGATCTATCGGCTTTTGAAGCTGGCTGCCCCTaGGTTTCCCCCAGCCCATGC +
Preference number: 2 (lower is better)
Translates to: LTSPFTLESQAHSDLSAFEAGCP*VSPSPC
Trigger: GCATGGGCTGGGGGAAACCCAGGGGCAGCCAGCTTC...AAAAGCCGATAGATCTGAATGGGCTTGAGACTCTAATGTGAAAGGAGATGTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
3UTR-3UTR CCA 90 bp AGGGTGCCCCAGGAATTGGCTTTGGGGCATCAGACAAGGGAGTGTGAGTGTGAGAAGGCATCTGGGATTTaGAGCAGTGAGTCATTTTCC +
Preference number: 2 (lower is better)
Translates to: RVPQELALGHQTRECECEKASGI*SSESFS
Trigger: GGAAAATGACTCACTGCTCCAAATCCCAGATGCCTT...CTCACACTCACACTCCCTTGTCTGATGCCCCAAAGCCAATTCCTGGGGCACCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000548263.5
3UTR-3UTR TCA 90 bp TTGGGGCATCAGACAAGGGAGTGTGAGTGTGAGTGTGTGTGTGCAGTGGCTGTGTTATTTCTTTCCATGTaGGGAGATGCGAGGAGAGGA +
Preference number: 2 (lower is better)
Translates to: LGHQTRECECECVCAVAVLFLSM*GDARRG
Trigger: TCCTCTCCTCGCATCTCCTCACATGGAAAGAAATAA...CACAGCCACTGCACACACACACTCACACTCACACTCCCTTGTCTGATGCCCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000546443.5
ENST00000548263.5
ENST00000550804.6
3UTR-3UTR GCA 90 bp TGTGTATCAGAAGCAACCAGGGCTAGGAGTGGACGATTCTATTCCCACAGGGGAGATAAATTCAGCCACTaGTTCCGAACAGGACCCCTC +
Preference number: 2 (lower is better)
Translates to: CVSEATRARSGRFYSHRGDKFSH*FRTGPL
Trigger: GAGGGGTCCTGTTCGGAAGCAGTGGCTGAATTTATC...TCCCCTGTGGGAATAGAATCGTCCACTCCTAGCCCTGGTTGCTTCTGATACACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000546443.5
ENST00000548263.5
ENST00000550804.6
3UTR-3UTR GCA 90 bp CTGACATCTCCTTTCACATTAGAGTCTCAAGCCCATTCAGATCTATCGGCTTTTCTGCCCAGCATCCCCTaGCATGAGGCAGGGATGCGT +
Preference number: 2 (lower is better)
Translates to: LTSPFTLESQAHSDLSAFLPSIP*HEAGMR
Trigger: ACGCATCCCTGCCTCATGGCAGGGGATGCTGGGCAG...AAAAGCCGATAGATCTGAATGGGCTTGAGACTCTAATGTGAAAGGAGATGTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
3UTR-3UTR GCA 90 bp AGTGGGGGAGTGGTGTGTTTGGATTCGTTCTTTCACCACCAAATACTGACGCGACTGTGTCGGGGACCATaGTTTGGATACTGGGATAGG +
Preference number: 2 (lower is better)
Translates to: SGGVVCLDSFFHHQILTRLCRGP*FGYWDR
Trigger: CCTATCCCAGTATCCAAAGCATGGTCCCCGACACAG...TCGCGTCAGTATTTGGTGGTGAAAGAACGAATCCAAACACACCACTCCCCCACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
3UTR-3UTR GCA 90 bp ATAAATTCAGCCACTGCTTCCGAACAGGACCCCTCCCTGGGACAAAAGAGCCAGGGCAGGACCTCTGAGTaGATTGATAAGATAGGGGTA +
Preference number: 2 (lower is better)
Translates to: INSATASEQDPSLGQKSQGRTSE*IDKIGV
Trigger: TACCCCTATCTTATCAATGCACTCAGAGGTCCTGCC...CTGGCTCTTTTGTCCCAGGGAGGGGTCCTGTTCGGAAGCAGTGGCTGAATTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000548263.5
3UTR-3UTR CCA 90 bp ATAAATTCAGCCACTGCTTCCGAACAGGACCCCTCCCTGGGACAAAAGAGCCAGAGTGTGTGTGTGCAGTaGCTGTGTATCAGAAGCAAC +
Preference number: 2 (lower is better)
Translates to: INSATASEQDPSLGQKSQSVCVQ*LCIRSN
Trigger: GTTGCTTCTGATACACAGCCACTGCACACACACACT...CTGGCTCTTTTGTCCCAGGGAGGGGTCCTGTTCGGAAGCAGTGGCTGAATTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000546443.5
ENST00000548263.5
ENST00000550804.6
3UTR-3UTR CCA 90 bp ATCCCGGTTCCTCCAAAACCACTTTCAGGGGATAAATTCAGCCACTGCTTCCGAAAGCTTTTATTGCTGTaGGGGGACCTGGAGAGGGAG +
Preference number: 2 (lower is better)
Translates to: IPVPPKPLSGDKFSHCFRKLLLL*GDLERE
Trigger: CTCCCTCTCCAGGTCCCCCCACAGCAATAAAAGCTT...TCGGAAGCAGTGGCTGAATTTATCCCCTGAAAGTGGTTTTGGAGGAACCGGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000546443.5
ENST00000548263.5
ENST00000550804.6
3UTR-3UTR CCA 90 bp AGAGAGGGTAGGGTGCCCCAGGAATTGGCTTTGGGGCATCAGACAAGGGAGTGTCAAACTACAAAGGGATaGATATCAGGGGGAAGCTTT +
Preference number: 2 (lower is better)
Translates to: REGRVPQELALGHQTRECQTTKG*ISGGSF
Trigger: AAAGCTTCCCCCTGATATCCATCCCTTTGTAGTTTG...ACACTCCCTTGTCTGATGCCCCAAAGCCAATTCCTGGGGCACCCTACCCTCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000546443.5
ENST00000550804.6
3UTR CAA 90 bp TGGAGTACAGGGTTCCTTAGGGTAGATGGGAAATGGAAGGGCAAGTaGGGACAGATGGTGAAGACCCTGACTGGCACACTAAGCAATCTA +
Preference number: 2 (lower is better)
Translates to: WSTGFLRVDGKWKGK*GQMVKTLTGTLSNL
Trigger: TAGATTGCTTAGTGTGCCAGTCAGGGTCTTCACCATCTGTCCCAACTTGCCCTTCCATTTCCCATCTACCCTAAGGAACCCTGTACTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
3UTR-3UTR TCA 90 bp AGAGAGGGTAGGGTGCCCCAGGAATTGGCTTTGGGGCATCAGACAAGGGAGTGTGATAGAAAATGGGCATaGAACCTAAGTGTATGCATG +
Preference number: 2 (lower is better)
Translates to: REGRVPQELALGHQTRECDRKWA*NLSVCM
Trigger: CATGCATACACTTAGGTTTCATGCCCATTTTCTATC...ACACTCCCTTGTCTGATGCCCCAAAGCCAATTCCTGGGGCACCCTACCCTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000546443.5
ENST00000548263.5
ENST00000550804.6
3UTR-3UTR TCA 90 bp CATGTGCCTGGGTTCCCAGGTTATCCTGTGCCTAATGCAGCATCCTGGCCTCTCGATAGAAAATGGGCATaGAACCTAAGTGTATGCATG +
Preference number: 2 (lower is better)
Translates to: HVPGFPGYPVPNAASWPLDRKWA*NLSVCM
Trigger: CATGCATACACTTAGGTTTCATGCCCATTTTCTATC...GAGAGGCCAGGATGCTGCATTAGGCACAGGATAACCTGGGAACCCAGGCACATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548263.5
3UTR-3UTR TCA 90 bp ATAAATTCAGCCACTGCTTCCGAACAGGACCCCTCCCTGGGACAAAAGAGCCAGAAAACCGGGACTAGATaGTCAAATCTCTCTTCCCTG +
Preference number: 2 (lower is better)
Translates to: INSATASEQDPSLGQKSQKTGTR*SNLSSL
Trigger: CAGGGAAGAGAGATTTGATCATCTAGTCCCGGTTTT...CTGGCTCTTTTGTCCCAGGGAGGGGTCCTGTTCGGAAGCAGTGGCTGAATTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000548263.5
3UTR-3UTR GCA 90 bp AGTGGGGGAGTGGTGTGTTTGGATTCGTTCTTTCACCACCAAATACTGACGCGAAGATCTATCGGCTTTTaGATGGATGCTGGGGAGCAG +
Preference number: 2 (lower is better)
Translates to: SGGVVCLDSFFHHQILTRRSIGF*MDAGEQ
Trigger: CTGCTCCCCAGCATCCATGCAAAAGCCGATAGATCT...TCGCGTCAGTATTTGGTGGTGAAAGAACGAATCCAAACACACCACTCCCCCACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
3UTR-3UTR CCA 90 bp CAGAAAGAGGAACCAATGAAACTGAGAACCAAAAGGGACCTGAGAGGCCATGATGGGTGCCCCAGGAATTaGCTTTGGGGCATCAGACAA +
Preference number: 2 (lower is better)
Translates to: QKEEPMKLRTKRDLRGHDGCPRN*LWGIRQ
Trigger: TTGTCTGATGCCCCAAAGCCAATTCCTGGGGCACCC...ATCATGGCCTCTCAGGTCCCTTTTGGTTCTCAGTTTCATTGGTTCCTCTTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000546443.5
ENST00000548263.5
ENST00000550804.6
3UTR-3UTR CCA 90 bp ATCCCGGTTCCTCCAAAACCACTTTCAGGGGATAAATTCAGCCACTGCTTCCGAGGGCACAGAAGTCAATaGGGGAACAGAAAGAGGAAC +
Preference number: 2 (lower is better)
Translates to: IPVPPKPLSGDKFSHCFRGHRSQ*GNRKRN
Trigger: GTTCCTCTTTCTGTTCCCCCATTGACTTCTGTGCCC...TCGGAAGCAGTGGCTGAATTTATCCCCTGAAAGTGGTTTTGGAGGAACCGGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000546443.5
ENST00000548263.5
ENST00000550804.6
3UTR-3UTR CCA 90 bp CTGACATCTCCTTTCACATTAGAGTCTCAAGCCCATTCAGATCTATCGGCTTTTGGAGAAAGGGAATGGTaGGGGTGGTCCACACAGGGG +
Preference number: 2 (lower is better)
Translates to: LTSPFTLESQAHSDLSAFGEREW*GWSTQG
Trigger: CCCCTGTGTGGACCACCCCCACCATTCCCTTTCTCC...AAAAGCCGATAGATCTGAATGGGCTTGAGACTCTAATGTGAAAGGAGATGTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
3UTR-3UTR CCA 90 bp CTCAAAGGTGAAGGGGTCCTGGGTGCTGAAAAAGAAGTGTCCATCCATGTGGTCTGTATCTCCTTTTCTTaGCTGAGGCCAAGAAGGGCA +
Preference number: 2 (lower is better)
Translates to: LKGEGVLGAEKEVSIHVVCISFS*LRPRRA
Trigger: TGCCCTTCTTGGCCTCAGCCAAGAAAAGGAGATACA...GACCACATGGATGGACACTTCTTTTTCAGCACCCAGGACCCCTTCACCTTTGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000548263.5
3UTR-3UTR CCA 90 bp AAACTGAGAACCAAAAGGGACCTGAGAGGCCATGATGTCCATGCTGCTGCCTCTTCAGTTGTAGCCAGATaGATGCTGGATCCCAGTCTT +
Preference number: 2 (lower is better)
Translates to: KLRTKRDLRGHDVHAAASSVVAR*MLDPSL
Trigger: AAGACTGGGATCCAGCATCCATCTGGCTACAACTGA...AGAGGCAGCAGCATGGACATCATGGCCTCTCAGGTCCCTTTTGGTTCTCAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548263.5
3UTR-3UTR TCA 90 bp CTGACATCTCCTTTCACATTAGAGTCTCAAGCCCATTCAGATCTATCGGCTTTTGCAGATTCGGGACAGTaGAGCAGAACAGGGCTGGAG +
Preference number: 2 (lower is better)
Translates to: LTSPFTLESQAHSDLSAFADSGQ*SRTGLE
Trigger: CTCCAGCCCTGTTCTGCTTCACTGTCCCGAATCTGC...AAAAGCCGATAGATCTGAATGGGCTTGAGACTCTAATGTGAAAGGAGATGTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
3UTR-3UTR GCA 90 bp AAAACTCAGGTAAACCAACGGAAACTCCAAATAAGAGAGGGTAGGGTGCCCCAGGATAAATTCAGCCACTaGTTCCGAACAGGACCCCTC +
Preference number: 2 (lower is better)
Translates to: KTQVNQRKLQIREGRVPQDKFSH*FRTGPL
Trigger: GAGGGGTCCTGTTCGGAAGCAGTGGCTGAATTTATC...CTGGGGCACCCTACCCTCTCTTATTTGGAGTTTCCGTTGGTTTACCTGAGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000546443.5
ENST00000548263.5
ENST00000550804.6
3UTR-3UTR CCA 90 bp AGTGGGGGAGTGGTGTGTTTGGATTCGTTCTTTCACCACCAAATACTGACGCGAGAATACCTAAGGTTATaGAAAAGGCTAGGGTGGGGC +
Preference number: 2 (lower is better)
Translates to: SGGVVCLDSFFHHQILTREYLRL*KRLGWG
Trigger: GCCCCACCCTAGCCTTTTCCATAACCTTAGGTATTC...TCGCGTCAGTATTTGGTGGTGAAAGAACGAATCCAAACACACCACTCCCCCACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
3UTR-3UTR CCA 90 bp CTGACATCTCCTTTCACATTAGAGTCTCAAGCCCATTCAGATCTATCGGCTTTTAAGGCAGCCACTCACTaGAAGCCAGGAGGTGTGGGT +
Preference number: 2 (lower is better)
Translates to: LTSPFTLESQAHSDLSAFKAATH*KPGGVG
Trigger: ACCCACACCTCCTGGCTTCCAGTGAGTGGCTGCCTT...AAAAGCCGATAGATCTGAATGGGCTTGAGACTCTAATGTGAAAGGAGATGTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
3UTR-3UTR CCA 90 bp TCACTCTCAGCAGGAAAGCGCTCCTTACAGATAGGACACTCCTTCCATGTGGGGTTCTCCCCACAATCCTaGAAGGCTTATTTTTCCAGT +
Preference number: 2 (lower is better)
Translates to: SLSAGKRSLQIGHSFHVGFSPQS*KAYFSS
Trigger: ACTGGAAAAATAAGCCTTCCAGGATTGTGGGGAGAA...CCCCACATGGAAGGAGTGTCCTATCTGTAAGGAGCGCTTTCCTGCTGAGAGTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000548263.5
3UTR CAA 90 bp TGGGATAGGCAAACCATGAGTAAGGAAGAGAAATGGCCCCACATTTaGTGGCACCCCCAGTCTGAAACTGCAAATTGCATGCCAGAAAGA +
Preference number: 2 (lower is better)
Translates to: WDRQTMSKEEKWPHI*WHPQSETANCMPER
Trigger: TCTTTCTGGCATGCAATTTGCAGTTTCAGACTGGGGGTGCCACAAAATGTGGGGCCATTTCTCTTCCTTACTCATGGTTTGCCTATCCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
3UTR-3UTR TCA 90 bp CTCAAAGGTGAAGGGGTCCTGGGTGCTGAAAAAGAAGTGTCCATCCATGTGGTCTGGGATTTGGAGCAGTaGGTCATTTTCCTTGTTAAC +
Preference number: 2 (lower is better)
Translates to: LKGEGVLGAEKEVSIHVVWDLEQ*VIFLVN
Trigger: GTTAACAAGGAAAATGACTCACTGCTCCAAATCCCA...GACCACATGGATGGACACTTCTTTTTCAGCACCCAGGACCCCTTCACCTTTGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000548263.5
3UTR-3UTR GCA 90 bp TTGAGCCCCCTCTGTGTCGGGGACCATGCTTTGGATACTGGGATAGGCAAACCAACAAATGCTTTACGATaGTGTGTATGTGTCTGTCTA +
Preference number: 2 (lower is better)
Translates to: LSPLCVGDHALDTGIGKPTNALR*CVCVCL
Trigger: TAGACAGACACATACACAGCATCGTAAAGCATTTGT...TGGTTTGCCTATCCCAGTATCCAAAGCATGGTCCCCGACACAGAGGGGGCTCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
3UTR-3UTR TCA 90 bp ATGAAACTGAGAACCAAAAGGGACCTGAGAGGCCATGATGTCCATGCTGCTGCCGATAGAAAATGGGCATaGAACCTAAGTGTATGCATG +
Preference number: 2 (lower is better)
Translates to: MKLRTKRDLRGHDVHAAADRKWA*NLSVCM
Trigger: CATGCATACACTTAGGTTTCATGCCCATTTTCTATC...GGCAGCAGCATGGACATCATGGCCTCTCAGGTCCCTTTTGGTTCTCAGTTTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000546443.5
ENST00000548263.5
ENST00000550804.6
3UTR-3UTR TCA 90 bp TGTGTATCAGAAGCAACCAGGGCTAGGAGTGGACGATTCTATTCCCACAGGGGAGATAGAAAATGGGCATaGAACCTAAGTGTATGCATG +
Preference number: 2 (lower is better)
Translates to: CVSEATRARSGRFYSHRGDRKWA*NLSVCM
Trigger: CATGCATACACTTAGGTTTCATGCCCATTTTCTATC...TCCCCTGTGGGAATAGAATCGTCCACTCCTAGCCCTGGTTGCTTCTGATACACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000546443.5
ENST00000548263.5
ENST00000550804.6
3UTR CAA 90 bp TTCTTTCACCACCAAATACTGACGCGAGTTCCTATTTGCTGCTACTaGGCTGACATCTCCTTTCACATTAGAGTCTCAAGCCCATTCAGA +
Preference number: 2 (lower is better)
Translates to: FFHHQILTRVPICCY*ADISFHIRVSSPFR
Trigger: TCTGAATGGGCTTGAGACTCTAATGTGAAAGGAGATGTCAGCCAAGTAGCAGCAAATAGGAACTCGCGTCAGTATTTGGTGGTGAAAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
3UTR CAA 90 bp ACTAAGCAATCTACATTTCTCATTCCTGTAGGTAACAGGTGGCCATaGAGGTTCGATAAGTGGGGGAGTGGTGTGTTTGGATTCGTTCTT +
Preference number: 2 (lower is better)
Translates to: TKQSTFLIPVGNRWP*RFDKWGSGVFGFVL
Trigger: AAGAACGAATCCAAACACACCACTCCCCCACTTATCGAACCTCAATGGCCACCTGTTACCTACAGGAATGAGAAATGTAGATTGCTTAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
3UTR-3UTR CCA 90 bp ATTATTTCTTTCCATGTGAGGAGATGCGAGGAGAGGATACAGAATACAGGAATCGGGCACAGAAGTCAATaGGGGAACAGAAAGAGGAAC +
Preference number: 2 (lower is better)
Translates to: IISFHVRRCEERIQNTGIGHRSQ*GNRKRN
Trigger: GTTCCTCTTTCTGTTCCCCCATTGACTTCTGTGCCC...GATTCCTGTATTCTGTATCCTCTCCTCGCATCTCCTCACATGGAAAGAAATAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000546443.5
ENST00000548263.5
ENST00000550804.6
3UTR-3UTR CCA 90 bp CTGACATCTCCTTTCACATTAGAGTCTCAAGCCCATTCAGATCTATCGGCTTTTAAATGCACCTCCTGCTaGGGATGTTGGCTCATAATT +
Preference number: 2 (lower is better)
Translates to: LTSPFTLESQAHSDLSAFKCTSC*GCWLII
Trigger: AATTATGAGCCAACATCCCCAGCAGGAGGTGCATTT...AAAAGCCGATAGATCTGAATGGGCTTGAGACTCTAATGTGAAAGGAGATGTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
3UTR-3UTR TCA 90 bp CAGTCACACCTCATGATAAGAACACATTTTGTGACAACAGTCATACATATCATATTATTTCTTTCCATGTaGGGAGATGCGAGGAGAGGA +
Preference number: 2 (lower is better)
Translates to: QSHLMIRTHFVTTVIHIILFLSM*GDARRG
Trigger: TCCTCTCCTCGCATCTCCTCACATGGAAAGAAATAA...TATGATATGTATGACTGTTGTCACAAAATGTGTTCTTATCATGAGGTGTGACTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
3UTR GCA 72 bp TGGCCAGCACACCAGGAGGCACGACAGGACAGTAACTaGCCAGCATCCCCTGCCATGAGGCAGGGATGCGTC +
Preference number: 3 (lower is better)
Translates to: WPAHQEARQDSN*PASPAMRQGCV
Trigger: GACGCATCCCTGCCTCATGGCAGGGGATGCTGGGCAGTTACTGTCCTGTCGTGCCTCCTGGTGTGCTGGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
3UTR CCA 72 bp GCTCCTGTGGGTGTATGTGCGGCTTGGCAGGGGCTGTaGCATGGGAGCAGGGGCCTGGGTTCCTGTTTGTCT +
Preference number: 3 (lower is better)
Translates to: APVGVCAAWQGL*HGSRGLGSCLS
Trigger: AGACAAACAGGAACCCAGGCCCCTGCTCCCATGCCACAGCCCCTGCCAAGCCGCACATACACCCACAGGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
3UTR-3UTR CAA 90 bp GCCATGTGGCTCCTGTGGGTGTATGTGCGGCTTGGCAGGGGCTGTGGCATGGGACCCCAGGAATTGGCTTaGGGGCATCAGACAAGGGAG +
Preference number: 3 (lower is better)
Translates to: AMWLLWVYVRLGRGCGMGPQELA*GHQTRE
Trigger: CTCCCTTGTCTGATGCCCCAAAGCCAATTCCTGGGG...TCCCATGCCACAGCCCCTGCCAAGCCGCACATACACCCACAGGAGCCACATGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
3UTR GCA 72 bp CTCCAGCCGAGAAGGATGACAGCATCACCCCCTCCCTaGCCTGAGCCCATCTCACATCCAGGCAAAACCGGG +
Preference number: 3 (lower is better)
Translates to: LQPRRMTASPPP*PEPISHPGKTG
Trigger: CCCGGTTTTGCCTGGATGTGAGATGGGCTCAGGGCAGGGAGGGGGTGATGCTGTCATCCTTCTCGGCTGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000548263.5
3UTR GCA 72 bp GGGTTGGAGGACGAGGGGGTTGTAGGCATGTGCTTGTaGAGGCCATTGCTGAGAGCCTTGGTGAGCGTGCAG +
Preference number: 3 (lower is better)
Translates to: GLEDEGVVGMCL*RPLLRALVSVQ
Trigger: CTGCACGCTCACCAAGGCTCTCAGCAATGGCCTGCACAAGCACATGCCTACAACCCCCTCGTCCTCCAACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
3UTR TCA 72 bp CCCCAACTGCCGCATTATCCAAGCCAGACTCCCACTTaGGACAACCCACTCATGGCCAGCACACCAGGAGGC +
Preference number: 3 (lower is better)
Translates to: PQLPHYPSQTPT*DNPLMASTPGG
Trigger: GCCTCCTGGTGTGCTGGCCATGAGTGGGTTGTCTCAAGTGGGAGTCTGGCTTGGATAATGCGGCAGTTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
3UTR-3UTR CAA 90 bp GCCCATTCAGATCTATCGGCTTTTGCATGGATGCTGGGGAGCAGGGAGGAAAGGCAGGGACCCATGAGTTaGCTCCCTCCCCAACTGCCG +
Preference number: 3 (lower is better)
Translates to: AHSDLSAFAWMLGSREERQGPMS*LPPQLP
Trigger: CGGCAGTTGGGGAGGGAGCAAACTCATGGGTCCCTG...CCTTTCCTCCCTGCTCCCCAGCATCCATGCAAAAGCCGATAGATCTGAATGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
3UTR-3UTR CAA 90 bp GAGCCCCCTCTGTGTCGGGGACCATGCTTTGGATACTGGGATAGGCAAACCATGCCATTGCTGAGAGCCTaGGTGAGCGTGCAGGTCCTT +
Preference number: 3 (lower is better)
Translates to: EPPLCRGPCFGYWDRQTMPLLRA*VSVQVL
Trigger: AAGGACCTGCACGCTCACCAAGGCTCTCAGCAATGG...CATGGTTTGCCTATCCCAGTATCCAAAGCATGGTCCCCGACACAGAGGGGGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
3UTR TCA 72 bp CATGCACCCACCCTGGGACTAAACCCTGAGCAGAAGTaGCAGGGACCCATGAGTTTGCTCCCTCCCCAACTG +
Preference number: 3 (lower is better)
Translates to: HAPTLGLNPEQK*QGPMSLLPPQL
Trigger: CAGTTGGGGAGGGAGCAAACTCATGGGTCCCTGTCACTTCTGCTCAGGGTTTAGTCCCAGGGTGGGTGCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
3UTR GCA 72 bp GCTATTGGGTTGGAGGACGAGGGGGTTGTAGGCATGTaGTTGTGCAGGCCATTGCTGAGAGCCTTGGTGAGC +
Preference number: 3 (lower is better)
Translates to: AIGLEDEGVVGM*LCRPLLRALVS
Trigger: GCTCACCAAGGCTCTCAGCAATGGCCTGCACAAGCACATGCCTACAACCCCCTCGTCCTCCAACCCAATAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
3UTR-3UTR CAA 90 bp GCCCATTCAGATCTATCGGCTTTTGCATGGATGCTGGGGAGCAGGGAGGAAAGGCCCCAGGAATTGGCTTaGGGGCATCAGACAAGGGAG +
Preference number: 3 (lower is better)
Translates to: AHSDLSAFAWMLGSREERPQELA*GHQTRE
Trigger: CTCCCTTGTCTGATGCCCCAAAGCCAATTCCTGGGG...CCTTTCCTCCCTGCTCCCCAGCATCCATGCAAAAGCCGATAGATCTGAATGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
3UTR CCA 72 bp ATCCAAGCCAGACTCCCACTTGAGACAACCCACTCATaGCCAGCACACCAGGAGGCACGACAGGACAGTAAC +
Preference number: 3 (lower is better)
Translates to: IQARLPLETTHS*PAHQEARQDSN
Trigger: GTTACTGTCCTGTCGTGCCTCCTGGTGTGCTGGCCATGAGTGGGTTGTCTCAAGTGGGAGTCTGGCTTGGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
3UTR CCA 72 bp GGGTTCCCAGGTTATCCTGTGCCTAATGCAGCATCCTaGCCTCTCCCACAGCGTCTTTCTCCCCACAATCCT +
Preference number: 3 (lower is better)
Translates to: GFPGYPVPNAAS*PLPQRLSPHNP
Trigger: AGGATTGTGGGGAGAAAGACGCTGTGGGAGAGGCCAGGATGCTGCATTAGGCACAGGATAACCTGGGAACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548263.5
3UTR-3UTR CAA 90 bp ATAAATTCAGCCACTGCTTCCGAACAGGACCCCTCCCTGGGACAAAAGAGCCAGAGGGTGCCCCAGGAATaGGCTTTGGGGCATCAGACA +
Preference number: 3 (lower is better)
Translates to: INSATASEQDPSLGQKSQRVPQE*ALGHQT
Trigger: TGTCTGATGCCCCAAAGCCAATTCCTGGGGCACCCT...CTGGCTCTTTTGTCCCAGGGAGGGGTCCTGTTCGGAAGCAGTGGCTGAATTTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000546443.5
ENST00000548263.5
ENST00000550804.6
3UTR-3UTR CAA 90 bp GAGCCCCCTCTGTGTCGGGGACCATGCTTTGGATACTGGGATAGGCAAACCATGGTTGTAGGCATGTGCTaGTGCAGGCCATTGCTGAGA +
Preference number: 3 (lower is better)
Translates to: EPPLCRGPCFGYWDRQTMVVGMC*CRPLLR
Trigger: TCTCAGCAATGGCCTGCACAAGCACATGCCTACAAC...CATGGTTTGCCTATCCCAGTATCCAAAGCATGGTCCCCGACACAGAGGGGGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
3UTR TCA 72 bp TTTTCCATGGCATGCACCCACCCTGGGACTAAACCCTaGGCAGAAGTGACAGGGACCCATGAGTTTGCTCCC +
Preference number: 3 (lower is better)
Translates to: FSMACTHPGTKP*AEVTGTHEFAP
Trigger: GGGAGCAAACTCATGGGTCCCTGTCACTTCTGCTCAGGGTTTAGTCCCAGGGTGGGTGCATGCCATGGAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
3UTR GCA 72 bp CTAAGAGAGACAGAGGGGAAAGGGAGAGGGTCGGCGTaGTCTGTTCCCTTCTTGACTTGCAGACTTCGGAGA +
Preference number: 3 (lower is better)
Translates to: LRETEGKGRGSA*SVPFLTCRLRR
Trigger: TCTCCGAAGTCTGCAAGTCAAGAAGGGAACAGAGCACGCCGACCCTCTCCCTTTCCCCTCTGTCTCTCTTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548263.5
3UTR CCA 72 bp GGGTCCTGGGTGCTGAAAAAGAAGTGTCCATCCATGTaGTCCTCCAGGGCATCCTTGTCACTCTCAGCAGGA +
Preference number: 3 (lower is better)
Translates to: GSWVLKKKCPSM*SSRASLSLSAG
Trigger: TCCTGCTGAGAGTGACAAGGATGCCCTGGAGGACCACATGGATGGACACTTCTTTTTCAGCACCCAGGACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548263.5
3UTR-3UTR CAA 90 bp ACCCACTCATGGCCAGCACACCAGGAGGCACGACAGGACAGTAACTGCCCAGCATGCATGAGTGTGTATTaGTGCATGTACGAGGGAGTA +
Preference number: 3 (lower is better)
Translates to: THSWPAHQEARQDSNCPACMSVY*CMYEGV
Trigger: TACTCCCTCGTACATGCACAAATACACACTCATGCA...TGCTGGGCAGTTACTGTCCTGTCGTGCCTCCTGGTGTGCTGGCCATGAGTGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
3UTR-3UTR CAA 90 bp ATGAAACTGAGAACCAAAAGGGACCTGAGAGGCCATGATGTCCATGCTGCTGCCAGGGTGCCCCAGGAATaGGCTTTGGGGCATCAGACA +
Preference number: 3 (lower is better)
Translates to: MKLRTKRDLRGHDVHAAARVPQE*ALGHQT
Trigger: TGTCTGATGCCCCAAAGCCAATTCCTGGGGCACCCT...GGCAGCAGCATGGACATCATGGCCTCTCAGGTCCCTTTTGGTTCTCAGTTTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000546443.5
ENST00000548263.5
ENST00000550804.6
3UTR-3UTR CAA 90 bp TGCAGTGGCTGTGTATCAGAAGCAACCAGGGCTAGGAGTGGACGATTCTATTCCAGGGTGCCCCAGGAATaGGCTTTGGGGCATCAGACA +
Preference number: 3 (lower is better)
Translates to: CSGCVSEATRARSGRFYSRVPQE*ALGHQT
Trigger: TGTCTGATGCCCCAAAGCCAATTCCTGGGGCACCCT...GGAATAGAATCGTCCACTCCTAGCCCTGGTTGCTTCTGATACACAGCCACTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000546443.5
ENST00000548263.5
ENST00000550804.6
3UTR GCA 72 bp TTCTTGACTTGCAGACTTCGGAGAGCAGGACCCATGTaGCTGGGTTCCCAGGTTATCCTGTGCCTAATGCAG +
Preference number: 3 (lower is better)
Translates to: FLTCRLRRAGPM*LGSQVILCLMQ
Trigger: CTGCATTAGGCACAGGATAACCTGGGAACCCAGGCACATGGGTCCTGCTCTCCGAAGTCTGCAAGTCAAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548263.5
3UTR GCA 72 bp CCGGGACTAGATGATCAAATCTCTCTTCCCTGTGCCTaGCCCCTTGAACCTGGGAATAAAAGGGAAGGCAGA +
Preference number: 3 (lower is better)
Translates to: PGLDDQISLPCA*PLEPGNKREGR
Trigger: TCTGCCTTCCCTTTTATTCCCAGGTTCAAGGGGGCAGGCACAGGGAAGAGAGATTTGATCATCTAGTCCCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548263.5
3UTR-3UTR CAA 90 bp CGATTCTATTCCCACAGGGGAAGGCCTCCTCCATCCCGGTTCCTCCAAAACCACTGCATGAGTGTGTATTaGTGCATGTACGAGGGAGTA +
Preference number: 3 (lower is better)
Translates to: RFYSHRGRPPPSRFLQNHCMSVY*CMYEGV
Trigger: TACTCCCTCGTACATGCACAAATACACACTCATGCA...GTGGTTTTGGAGGAACCGGGATGGAGGAGGCCTTCCCCTGTGGGAATAGAATCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000546443.5
ENST00000548263.5
ENST00000550804.6
3UTR-3UTR CAA 90 bp ATCCCGGTTCCTCCAAAACCACTTTCAGGGGATAAATTCAGCCACTGCTTCCGAAAGCCAGACTCCCACTaGAGACAACCCACTCATGGC +
Preference number: 3 (lower is better)
Translates to: IPVPPKPLSGDKFSHCFRKPDSH*RQPTHG
Trigger: GCCATGAGTGGGTTGTCTCAAGTGGGAGTCTGGCTT...TCGGAAGCAGTGGCTGAATTTATCCCCTGAAAGTGGTTTTGGAGGAACCGGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
3UTR-3UTR CAA 90 bp AGGAATTGGCTTTGGGGCATCAGACAAGGGAGTGTGAGTGTGAGTGTGTGTGTGCTGTATCTCCTTTTCTaGGCTGAGGCCAAGAAGGGC +
Preference number: 3 (lower is better)
Translates to: RNWLWGIRQGSVSVSVCVLYLLF*AEAKKG
Trigger: GCCCTTCTTGGCCTCAGCCAAGAAAAGGAGATACAG...CACACACACACTCACACTCACACTCCCTTGTCTGATGCCCCAAAGCCAATTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548263.5
3UTR-3UTR CAA 90 bp TCACTCTCAGCAGGAAAGCGCTCCTTACAGATAGGACACTCCTTCCATGTGGGGTGCATGAGTGTGTATTaGTGCATGTACGAGGGAGTA +
Preference number: 3 (lower is better)
Translates to: SLSAGKRSLQIGHSFHVGCMSVY*CMYEGV
Trigger: TACTCCCTCGTACATGCACAAATACACACTCATGCA...CCCCACATGGAAGGAGTGTCCTATCTGTAAGGAGCGCTTTCCTGCTGAGAGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548263.5
3UTR-3UTR CAA 90 bp GTAAGATCACTCAAAGGTGAAGGGGTCCTGGGTGCTGAAAAAGAAGTGTCCATCTGTTCCCTTCTTGACTaGCAGACTTCGGAGAGCAGG +
Preference number: 3 (lower is better)
Translates to: VRSLKGEGVLGAEKEVSICSLLD*QTSESR
Trigger: CCTGCTCTCCGAAGTCTGCAAGTCAAGAAGGGAACA...GATGGACACTTCTTTTTCAGCACCCAGGACCCCTTCACCTTTGAGTGATCTTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000548263.5
3UTR GCA 72 bp CTGAGAGCCTTGGTGAGCGTGCAGGTCCTTAACAAATaGTTTACGATGCTGTGTATGTGTCTGTCTAGCCTG +
Preference number: 3 (lower is better)
Translates to: LRALVSVQVLNK*FTMLCMCLSSL
Trigger: CAGGCTAGACAGACACATACACAGCATCGTAAAGCATTTGTTAAGGACCTGCACGCTCACCAAGGCTCTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
3UTR CCA 72 bp CCTGTAGGTAACAGGTGGCCATTGAGGTTCGATAAGTaGGGGAGTGGTGTGTTTGGATTCGTTCTTTCACCA +
Preference number: 3 (lower is better)
Translates to: PVGNRWPLRFDK*GSGVFGFVLSP
Trigger: TGGTGAAAGAACGAATCCAAACACACCACTCCCCCACTTATCGAACCTCAATGGCCACCTGTTACCTACAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
3UTR-3UTR CAA 90 bp CTCCAAAACCACTTTCAGGGGATAAATTCAGCCACTGCTTCCGAACAGGACCCCTGCATGAGTGTGTATTaGTGCATGTACGAGGGAGTA +
Preference number: 3 (lower is better)
Translates to: LQNHFQGINSATASEQDPCMSVY*CMYEGV
Trigger: TACTCCCTCGTACATGCACAAATACACACTCATGCA...GGGGTCCTGTTCGGAAGCAGTGGCTGAATTTATCCCCTGAAAGTGGTTTTGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000546443.5
ENST00000548263.5
ENST00000550804.6
3UTR-3UTR CAA 90 bp GGGTCCTGGGTGCTGAAAAAGAAGTGTCCATCCATGTGGTCCTCCAGGGCATCCAGTGAGTCATTTTCCTaGTTAACCATACCTGTATCT +
Preference number: 3 (lower is better)
Translates to: GSWVLKKKCPSMWSSRASSESFS*LTIPVS
Trigger: AGATACAGGTATGGTTAACAAGGAAAATGACTCACT...GGATGCCCTGGAGGACCACATGGATGGACACTTCTTTTTCAGCACCCAGGACCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000548263.5
3UTR-3UTR CAA 90 bp TCCATCCCGGTTCCTCCAAAACCACTTTCAGGGGATAAATTCAGCCACTGCTTCTGCATGAGTGTGTATTaGTGCATGTACGAGGGAGTA +
Preference number: 3 (lower is better)
Translates to: SIPVPPKPLSGDKFSHCFCMSVY*CMYEGV
Trigger: TACTCCCTCGTACATGCACAAATACACACTCATGCA...GAAGCAGTGGCTGAATTTATCCCCTGAAAGTGGTTTTGGAGGAACCGGGATGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000546443.5
ENST00000548263.5
ENST00000550804.6
3UTR TCA 72 bp TTTGGCATAAGGTACAGTGATGGCTGCTATGAAGGGTaGAGTTCTCGGCAGTGGGAAACTTGTCCCACTTTT +
Preference number: 3 (lower is better)
Translates to: FGIRYSDGCYEG*SSRQWETCPTF
Trigger: AAAAGTGGGACAAGTTTCCCACTGCCGAGAACTTCACCCTTCATAGCAGCCATCACTGTACCTTATGCCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
3UTR CCA 72 bp CAAACTGAATACCTAAGGTTATGGAAAAGGCTAGGGTaGGGCACAGAAGTCAATGGGGGAACAGAAAGAGGA +
Preference number: 3 (lower is better)
Translates to: QTEYLRLWKRLG*GTEVNGGTERG
Trigger: TCCTCTTTCTGTTCCCCCATTGACTTCTGTGCCCCACCCTAGCCTTTTCCATAACCTTAGGTATTCAGTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000546443.5
ENST00000548263.5
ENST00000550804.6
3UTR TCA 72 bp TGGTGTGTTTGGATTCGTTCTTTCACCACCAAATACTaGCGCGAGTTCCTATTTGCTGCTACTTGGCTGACA +
Preference number: 3 (lower is better)
Translates to: WCVWIRSFTTKY*REFLFAATWLT
Trigger: TGTCAGCCAAGTAGCAGCAAATAGGAACTCGCGTCAGTATTTGGTGGTGAAAGAACGAATCCAAACACACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
3UTR CCA 72 bp GATAGGGGTAGGGATTACCTGAAGGCATCTGGGATTTaGAGCAGTGAGTCATTTTCCTTGTTAACCATACCT +
Preference number: 3 (lower is better)
Translates to: DRGRDYLKASGI*SSESFSLLTIP
Trigger: AGGTATGGTTAACAAGGAAAATGACTCACTGCTCCAAATCCCAGATGCCTTCAGGTAATCCCTACCCCTATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548263.5
3UTR TCA 72 bp ATAAGTAGAAAGGCTGAGTTGCCAAATACCCCTCAGTaGGTAGGAAAGAGAACTAGAATTGGAAGCTGGCTG +
Preference number: 3 (lower is better)
Translates to: ISRKAELPNTPQ*VGKRTRIGSWL
Trigger: CAGCCAGCTTCCAATTCTAGTTCTCTTTCCTACTCACTGAGGGGTATTTGGCAACTCAGCCTTTCTACTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
3UTR TCA 72 bp TCTGAGTGCATTGATAAGATAGGGGTAGGGATTACCTaGAGGCATCTGGGATTTGGAGCAGTGAGTCATTTT +
Preference number: 3 (lower is better)
Translates to: SECIDKIGVGIT*RHLGFGAVSHF
Trigger: AAAATGACTCACTGCTCCAAATCCCAGATGCCTTCAGGTAATCCCTACCCCTATCTTATCAATGCACTCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548263.5
3UTR GCA 72 bp TTTCACCACCAAATACTGACGCGAGTTCCTATTTGCTaGTACTTGGCTGACATCTCCTTTCACATTAGAGTC +
Preference number: 3 (lower is better)
Translates to: FHHQILTRVPIC*YLADISFHIRV
Trigger: GACTCTAATGTGAAAGGAGATGTCAGCCAAGTAGCAGCAAATAGGAACTCGCGTCAGTATTTGGTGGTGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
3UTR GCA 72 bp TTCTTTCACCACCAAATACTGACGCGAGTTCCTATTTaGTGCTACTTGGCTGACATCTCCTTTCACATTAGA +
Preference number: 3 (lower is better)
Translates to: FFHHQILTRVPI*CYLADISFHIR
Trigger: TCTAATGTGAAAGGAGATGTCAGCCAAGTAGCAGCAAATAGGAACTCGCGTCAGTATTTGGTGGTGAAAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
3UTR GCA 72 bp GATTTTAGGAACACAGTGATGTATAAGCATAGAATCTaGCTTCAAGTTGCTTACAGTTTAGGGAGAATAAAA +
Preference number: 3 (lower is better)
Translates to: DFRNTVMYKHRI*LQVAYSLGRIK
Trigger: TTTTATTCTCCCTAAACTGTAAGCAACTTGAAGGCAGATTCTATGCTTATACATCACTGTGTTCCTAAAATC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR TCA 90 bp GTATCAGAAGCAACCAGGGCTAGGAGTGGACGATTCTATTCCCACAGGGGAAGGGGAAGAGGGCGTCCGTaGCGGCGGCCTCACCGCGGC +
Preference number: 4 (lower is better)
Translates to: VSEATRARSGRFYSHRGRGRGRP*RRPHRG
Trigger: GCCGCGGTGAGGCCGCCGTCACGGACGCCCTCTTCC...CCTTCCCCTGTGGGAATAGAATCGTCCACTCCTAGCCCTGGTTGCTTCTGATAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262059.8
CDS-3UTR TCA 90 bp GGAGTGGACGATTCTATTCCCACAGGGGAAGGCCTCCTCCATCCCGGTTCCTCCCAGCATCCCCTGCCATaGGGCAGGGATGCGTCCCCT +
Preference number: 4 (lower is better)
Translates to: GVDDSIPTGEGLLHPGSSQHPLP*GRDASP
Trigger: AGGGGACGCATCCCTGCCTCATGGCAGGGGATGCTG...GGAGGAACCGGGATGGAGGAGGCCTTCCCCTGTGGGAATAGAATCGTCCACTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR CCA 90 bp AGGAGTGGACGATTCTATTCCCACAGGGGAAGGCCTCCTCCATCCCGGTTCCTCCCTTCCATGTGGGGGTaGCAGGGCCCCCAGTGCTGG +
Preference number: 4 (lower is better)
Translates to: RSGRFYSHRGRPPPSRFLPSMWG*QGPQCW
Trigger: CCAGCACTGGGGGCCCTGCCACCCCCACATGGAAGG...GAGGAACCGGGATGGAGGAGGCCTTCCCCTGTGGGAATAGAATCGTCCACTCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000546443.5
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CCA 90 bp ACCCACTCATGGCCAGCACACCAGGAGGCACGACAGGACAGTAACTGCCCAGCAGAAGCTGGCTGCCCCTaGGTTTCCCCCAGCCCATGC +
Preference number: 4 (lower is better)
Translates to: THSWPAHQEARQDSNCPAEAGCP*VSPSPC
Trigger: GCATGGGCTGGGGGAAACCCAGGGGCAGCCAGCTTC...TGCTGGGCAGTTACTGTCCTGTCGTGCCTCCTGGTGTGCTGGCCATGAGTGGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR TCA 90 bp TGCAGCATCCTGGCCTCTCCCACAGCGTCTTTCTCCCCACAATCCTGGAAGGCTGCTGGCCCAGAGAGGTaGGGAGAAATGGGAGCCGGC +
Preference number: 4 (lower is better)
Translates to: CSILASPTASFSPQSWKAAGPER*GEMGAG
Trigger: GCCGGCTCCCATTTCTCCTCACCTCTCTGGGCCAGC...AGCCTTCCAGGATTGTGGGGAGAAAGACGCTGTGGGAGAGGCCAGGATGCTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548263.5
CDS-3UTR TCA 90 bp CCAGACTCCCACTTGAGACAACCCACTCATGGCCAGCACACCAGGAGGCACGACGGAATCCCAGGCGGGTaGTGGATGCCTCTGTCAGCC +
Preference number: 4 (lower is better)
Translates to: PDSHLRQPTHGQHTRRHDGIPGG*WMPLSA
Trigger: GGCTGACAGAGGCATCCATCACCCGCCTGGGATTCC...GTCGTGCCTCCTGGTGTGCTGGCCATGAGTGGGTTGTCTCAAGTGGGAGTCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR GCA 90 bp AGGAGTGGACGATTCTATTCCCACAGGGGAAGGCCTCCTCCATCCCGGTTCCTCTCTGCCTCCACACTCTaGAGCAGCCCTGCCCGCTCC +
Preference number: 4 (lower is better)
Translates to: RSGRFYSHRGRPPPSRFLSASTL*SSPARS
Trigger: GGAGCGGGCAGGGCTGCTGCAGAGTGTGGAGGCAGA...GAGGAACCGGGATGGAGGAGGCCTTCCCCTGTGGGAATAGAATCGTCCACTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR GCA 90 bp CCAGACTCCCACTTGAGACAACCCACTCATGGCCAGCACACCAGGAGGCACGACCTGCCCAGCATCCCCTaGCATGAGGCAGGGATGCGT +
Preference number: 4 (lower is better)
Translates to: PDSHLRQPTHGQHTRRHDLPSIP*HEAGMR
Trigger: ACGCATCCCTGCCTCATGGCAGGGGATGCTGGGCAG...GTCGTGCCTCCTGGTGTGCTGGCCATGAGTGGGTTGTCTCAAGTGGGAGTCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR CCA 90 bp GGAGTGGACGATTCTATTCCCACAGGGGAAGGCCTCCTCCATCCCGGTTCCTCCCACTGGCACTGGGCATaGTGCCTGGGGGAAGGGTGT +
Preference number: 4 (lower is better)
Translates to: GVDDSIPTGEGLLHPGSSHWHWA*CLGEGC
Trigger: ACACCCTTCCCCCAGGCACCATGCCCAGTGCCAGTG...GGAGGAACCGGGATGGAGGAGGCCTTCCCCTGTGGGAATAGAATCGTCCACTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CCA 90 bp CCAGACTCCCACTTGAGACAACCCACTCATGGCCAGCACACCAGGAGGCACGACCACTGGCACTGGGCATaGTGCCTGGGGGAAGGGTGT +
Preference number: 4 (lower is better)
Translates to: PDSHLRQPTHGQHTRRHDHWHWA*CLGEGC
Trigger: ACACCCTTCCCCCAGGCACCATGCCCAGTGCCAGTG...GTCGTGCCTCCTGGTGTGCTGGCCATGAGTGGGTTGTCTCAAGTGGGAGTCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR TCA 90 bp AGGAGTGGACGATTCTATTCCCACAGGGGAAGGCCTCCTCCATCCCGGTTCCTCGGACTTCAAGGCCCATaGTCCCTTAGGAGGGGGCCG +
Preference number: 4 (lower is better)
Translates to: RSGRFYSHRGRPPPSRFLGLQGP*SLRRGP
Trigger: CGGCCCCCTCCTAAGGGATCATGGGCCTTGAAGTCC...GAGGAACCGGGATGGAGGAGGCCTTCCCCTGTGGGAATAGAATCGTCCACTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262059.8
CDS-3UTR TCA 90 bp GGAGTGGACGATTCTATTCCCACAGGGGAAGGCCTCCTCCATCCCGGTTCCTCCTGTCCCTCTCTTCTGTaGTCTCCCCATGGGACCGGG +
Preference number: 4 (lower is better)
Translates to: GVDDSIPTGEGLLHPGSSCPSLL*SPHGTG
Trigger: CCCGGTCCCATGGGGAGATCACAGAAGAGAGGGACA...GGAGGAACCGGGATGGAGGAGGCCTTCCCCTGTGGGAATAGAATCGTCCACTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR TCA 90 bp AGAGAGGGTAGGGTGCCCCAGGAATTGGCTTTGGGGCATCAGACAAGGGAGTGTGAGCACACGCAGGGCTaGCCGCAGCTCTGTCAGCTC +
Preference number: 4 (lower is better)
Translates to: REGRVPQELALGHQTRECEHTQG*PQLCQL
Trigger: GAGCTGACAGAGCTGCGGTCAGCCCTGCGTGTGCTC...ACACTCCCTTGTCTGATGCCCCAAAGCCAATTCCTGGGGCACCCTACCCTCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR TCA 90 bp CAGAAGCAACCAGGGCTAGGAGTGGACGATTCTATTCCCACAGGGGAAGGCCTCGGGAGCAGGGCCTGGTaGCTGTCCACACAGATGCCC +
Preference number: 4 (lower is better)
Translates to: QKQPGLGVDDSIPTGEGLGSRAW*LSTQMP
Trigger: GGGCATCTGTGTGGACAGTCACCAGGCCCTGCTCCC...GAGGCCTTCCCCTGTGGGAATAGAATCGTCCACTCCTAGCCCTGGTTGCTTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548263.5
CDS-3UTR GCA 90 bp CGATTCTATTCCCACAGGGGAAGGCCTCCTCCATCCCGGTTCCTCCAAAACCACGGTGCGGTCCCTGGCTaGTGCTGCACTGGCCAACTC +
Preference number: 4 (lower is better)
Translates to: RFYSHRGRPPPSRFLQNHGAVPG*CCTGQL
Trigger: GAGTTGGCCAGTGCAGCAGCAGCCAGGGACCGCACC...GTGGTTTTGGAGGAACCGGGATGGAGGAGGCCTTCCCCTGTGGGAATAGAATCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR GCA 90 bp GGAGTGGACGATTCTATTCCCACAGGGGAAGGCCTCCTCCATCCCGGTTCCTCCACTCTGCAGCAGCCCTaGCCGCTCCTTGCTCCATTG +
Preference number: 4 (lower is better)
Translates to: GVDDSIPTGEGLLHPGSSTLQQP*PLLAPL
Trigger: CAATGGAGCAAGGAGCGGGCAGGGCTGCTGCAGAGT...GGAGGAACCGGGATGGAGGAGGCCTTCCCCTGTGGGAATAGAATCGTCCACTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR GCA 90 bp CAGAAGCAACCAGGGCTAGGAGTGGACGATTCTATTCCCACAGGGGAAGGCCTCTCTGCCTCCACACTCTaGAGCAGCCCTGCCCGCTCC +
Preference number: 4 (lower is better)
Translates to: QKQPGLGVDDSIPTGEGLSASTL*SSPARS
Trigger: GGAGCGGGCAGGGCTGCTGCAGAGTGTGGAGGCAGA...GAGGCCTTCCCCTGTGGGAATAGAATCGTCCACTCCTAGCCCTGGTTGCTTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR GCA 90 bp GAGAAGGGAGCTATTGGGTTGGAGGACGAGGGGGTTGTAGGCATGTGCTTGTGCTCTGCCTCCACACTCTaGAGCAGCCCTGCCCGCTCC +
Preference number: 4 (lower is better)
Translates to: EKGAIGLEDEGVVGMCLCSASTL*SSPARS
Trigger: GGAGCGGGCAGGGCTGCTGCAGAGTGTGGAGGCAGA...GCACAAGCACATGCCTACAACCCCCTCGTCCTCCAACCCAATAGCTCCCTTCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR GCA 90 bp CCAGACTCCCACTTGAGACAACCCACTCATGGCCAGCACACCAGGAGGCACGACTCCTGTGGGTGTATGTaGGGCTTGGCAGGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: PDSHLRQPTHGQHTRRHDSCGCM*GLAGAV
Trigger: CACAGCCCCTGCCAAGCCGCACATACACCCACAGGA...GTCGTGCCTCCTGGTGTGCTGGCCATGAGTGGGTTGTCTCAAGTGGGAGTCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR GCA 90 bp ACCCACTCATGGCCAGCACACCAGGAGGCACGACAGGACAGTAACTGCCCAGCAGAATTGGAAGCTGGCTaGCCCTGGGTTTCCCCCAGC +
Preference number: 4 (lower is better)
Translates to: THSWPAHQEARQDSNCPAELEAG*PWVSPS
Trigger: GCTGGGGGAAACCCAGGGGCAGCCAGCTTCCAATTC...TGCTGGGCAGTTACTGTCCTGTCGTGCCTCCTGGTGTGCTGGCCATGAGTGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR CCA 90 bp TTTCAGGGGATAAATTCAGCCACTGCTTCCGAACAGGACCCCTCCCTGGGACAATCGGCCACCCGCTGCTaGGCCTGGCCTAGGGTGTCC +
Preference number: 4 (lower is better)
Translates to: FQGINSATASEQDPSLGQSATRC*AWPRVS
Trigger: GGACACCCTAGGCCAGGCCCAGCAGCGGGTGGCCGA...TTGTCCCAGGGAGGGGTCCTGTTCGGAAGCAGTGGCTGAATTTATCCCCTGAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262059.8
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CCA 90 bp AGAGAGGGTAGGGTGCCCCAGGAATTGGCTTTGGGGCATCAGACAAGGGAGTGTGAGGCTGCAAGCTCCTaGGCCCCTCGAAGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: REGRVPQELALGHQTRECEAASS*APRSCS
Trigger: GGAGCAGCTTCGAGGGGCCCAGGAGCTTGCAGCCTC...ACACTCCCTTGTCTGATGCCCCAAAGCCAATTCCTGGGGCACCCTACCCTCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CCA 90 bp AGGAGTGGACGATTCTATTCCCACAGGGGAAGGCCTCCTCCATCCCGGTTCCTCGGTGTATGTGCGGCTTaGCAGGGGCTGTGGCATGGG +
Preference number: 4 (lower is better)
Translates to: RSGRFYSHRGRPPPSRFLGVCAA*QGLWHG
Trigger: CCCATGCCACAGCCCCTGCCAAGCCGCACATACACC...GAGGAACCGGGATGGAGGAGGCCTTCCCCTGTGGGAATAGAATCGTCCACTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR CCA 90 bp GGAGTGGACGATTCTATTCCCACAGGGGAAGGCCTCCTCCATCCCGGTTCCTCCGCCATGTGGCTCCTGTaGGTGTATGTGCGGCTTGGC +
Preference number: 4 (lower is better)
Translates to: GVDDSIPTGEGLLHPGSSAMWLL*VYVRLG
Trigger: GCCAAGCCGCACATACACCCACAGGAGCCACATGGC...GGAGGAACCGGGATGGAGGAGGCCTTCCCCTGTGGGAATAGAATCGTCCACTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR CCA 90 bp GGGTTCCCAGGTTATCCTGTGCCTAATGCAGCATCCTGGCCTCTCCCACAGCGTCTCTGCTCCTATCCCTaGGGGCCATGGTCACCTCCC +
Preference number: 4 (lower is better)
Translates to: GFPGYPVPNAASWPLPQRLCSYP*GPWSPP
Trigger: GGGAGGTGACCATGGCCCCCAGGGATAGGAGCAGAG...ACGCTGTGGGAGAGGCCAGGATGCTGCATTAGGCACAGGATAACCTGGGAACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548263.5
3UTR CAA 72 bp AGGGAGAGGGTCGGCGTGCTCTGTTCCCTTCTTGACTaGCAGACTTCGGAGAGCAGGACCCATGTGCCTGGG +
Preference number: 4 (lower is better)
Translates to: RERVGVLCSLLD*QTSESRTHVPG
Trigger: CCCAGGCACATGGGTCCTGCTCTCCGAAGTCTGCAAGTCAAGAAGGGAACAGAGCACGCCGACCCTCTCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548263.5
CDS-3UTR TCA 90 bp TTGGGGCATCAGACAAGGGAGTGTGAGTGTGAGTGTGTGTGTGCAGTGGCTGTGGAGCACACGCAGGGCTaGCCGCAGCTCTGTCAGCTC +
Preference number: 4 (lower is better)
Translates to: LGHQTRECECECVCAVAVEHTQG*PQLCQL
Trigger: GAGCTGACAGAGCTGCGGTCAGCCCTGCGTGTGCTC...CACAGCCACTGCACACACACACTCACACTCACACTCCCTTGTCTGATGCCCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR TCA 90 bp AGAGAGGGTAGGGTGCCCCAGGAATTGGCTTTGGGGCATCAGACAAGGGAGTGTTGGGGACTCGTCCTCTaGGTCTGTCAGAGCTGCCGG +
Preference number: 4 (lower is better)
Translates to: REGRVPQELALGHQTRECWGLVL*VCQSCR
Trigger: CCGGCAGCTCTGACAGACTCAGAGGACGAGTCCCCA...ACACTCCCTTGTCTGATGCCCCAAAGCCAATTCCTGGGGCACCCTACCCTCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000546443.5
ENST00000548263.5
ENST00000550804.6
CDS-3UTR TCA 90 bp ACCCACTCATGGCCAGCACACCAGGAGGCACGACAGGACAGTAACTGCCCAGCAGGAGAGGAGGGCAGCTaGGAAGGGAGCTATTGGGTT +
Preference number: 4 (lower is better)
Translates to: THSWPAHQEARQDSNCPAGEEGS*EGSYWV
Trigger: AACCCAATAGCTCCCTTCTCAGCTGCCCTCCTCTCC...TGCTGGGCAGTTACTGTCCTGTCGTGCCTCCTGGTGTGCTGGCCATGAGTGGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR TCA 90 bp CCAGACTCCCACTTGAGACAACCCACTCATGGCCAGCACACCAGGAGGCACGACGGAGAGGAGGGCAGCTaGGAAGGGAGCTATTGGGTT +
Preference number: 4 (lower is better)
Translates to: PDSHLRQPTHGQHTRRHDGEEGS*EGSYWV
Trigger: AACCCAATAGCTCCCTTCTCAGCTGCCCTCCTCTCC...GTCGTGCCTCCTGGTGTGCTGGCCATGAGTGGGTTGTCTCAAGTGGGAGTCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR TCA 90 bp AGGGTGCCCCAGGAATTGGCTTTGGGGCATCAGACAAGGGAGTGTGAGTGTGAGGGAATCCCAGGCGGGTaGTGGATGCCTCTGTCAGCC +
Preference number: 4 (lower is better)
Translates to: RVPQELALGHQTRECECEGIPGG*WMPLSA
Trigger: GGCTGACAGAGGCATCCATCACCCGCCTGGGATTCC...CTCACACTCACACTCCCTTGTCTGATGCCCCAAAGCCAATTCCTGGGGCACCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR TCA 90 bp GGAGTGGACGATTCTATTCCCACAGGGGAAGGCCTCCTCCATCCCGGTTCCTCCCCTGGCCTTGCTGGTTaGACTCACCTGGCCATGTCA +
Preference number: 4 (lower is better)
Translates to: GVDDSIPTGEGLLHPGSSPGLAG*THLAMS
Trigger: TGACATGGCCAGGTGAGTTCAACCAGCAAGGCCAGG...GGAGGAACCGGGATGGAGGAGGCCTTCCCCTGTGGGAATAGAATCGTCCACTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548263.5
CDS-3UTR GCA 90 bp GAGAAGGGAGCTATTGGGTTGGAGGACGAGGGGGTTGTAGGCATGTGCTTGTGCGCCCTCTCGAGCTCCTaGACTCGGCTCCTCAGCTCT +
Preference number: 4 (lower is better)
Translates to: EKGAIGLEDEGVVGMCLCALSSS*TRLLSS
Trigger: AGAGCTGAGGAGCCGAGTGCAGGAGCTCGAGAGGGC...GCACAAGCACATGCCTACAACCCCCTCGTCCTCCAACCCAATAGCTCCCTTCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR GCA 90 bp AGGGTGCCCCAGGAATTGGCTTTGGGGCATCAGACAAGGGAGTGTGAGTGTGAGGCCCTCTCGAGCTCCTaGACTCGGCTCCTCAGCTCT +
Preference number: 4 (lower is better)
Translates to: RVPQELALGHQTRECECEALSSS*TRLLSS
Trigger: AGAGCTGAGGAGCCGAGTGCAGGAGCTCGAGAGGGC...CTCACACTCACACTCCCTTGTCTGATGCCCCAAAGCCAATTCCTGGGGCACCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR GCA 90 bp GGAGTGGACGATTCTATTCCCACAGGGGAAGGCCTCCTCCATCCCGGTTCCTCCACATGGTCTCCCTGTTaGCGGCTCAGGATGTCCCTC +
Preference number: 4 (lower is better)
Translates to: GVDDSIPTGEGLLHPGSSTWSPC*RLRMSL
Trigger: GAGGGACATCCTGAGCCGGCAACAGGGAGACCATGT...GGAGGAACCGGGATGGAGGAGGCCTTCCCCTGTGGGAATAGAATCGTCCACTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CCA 90 bp TGCAGTGGCTGTGTATCAGAAGCAACCAGGGCTAGGAGTGGACGATTCTATTCCTCGGCCACCCGCTGCTaGGCCTGGCCTAGGGTGTCC +
Preference number: 4 (lower is better)
Translates to: CSGCVSEATRARSGRFYSSATRC*AWPRVS
Trigger: GGACACCCTAGGCCAGGCCCAGCAGCGGGTGGCCGA...GGAATAGAATCGTCCACTCCTAGCCCTGGTTGCTTCTGATACACAGCCACTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262059.8
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CCA 90 bp ACGATTCTATTCCCACAGGGGAAGGCCTCCTCCATCCCGGTTCCTCCAAAACCAGAGGCTGCAAGCTCCTaGGCCCCTCGAAGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: TILFPQGKASSIPVPPKPEAASS*APRSCS
Trigger: GGAGCAGCTTCGAGGGGCCCAGGAGCTTGCAGCCTC...TGGTTTTGGAGGAACCGGGATGGAGGAGGCCTTCCCCTGTGGGAATAGAATCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CCA 90 bp GAGAAGGGAGCTATTGGGTTGGAGGACGAGGGGGTTGTAGGCATGTGCTTGTGCCTATGGTGCGGTCCCTaGCTGCTGCTGCACTGGCCA +
Preference number: 4 (lower is better)
Translates to: EKGAIGLEDEGVVGMCLCLWCGP*LLLHWP
Trigger: TGGCCAGTGCAGCAGCAGCCAGGGACCGCACCATAG...GCACAAGCACATGCCTACAACCCCCTCGTCCTCCAACCCAATAGCTCCCTTCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR CCA 90 bp TTTCAGGGGATAAATTCAGCCACTGCTTCCGAACAGGACCCCTCCCTGGGACAACCTTCCATGTGGGGGTaGCAGGGCCCCCAGTGCTGG +
Preference number: 4 (lower is better)
Translates to: FQGINSATASEQDPSLGQPSMWG*QGPQCW
Trigger: CCAGCACTGGGGGCCCTGCCACCCCCACATGGAAGG...TTGTCCCAGGGAGGGGTCCTGTTCGGAAGCAGTGGCTGAATTTATCCCCTGAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000546443.5
ENST00000548263.5
ENST00000550804.6
3UTR CAA 72 bp AGGGAGAGGAGGGCAGCTGAGAAGGGAGCTATTGGGTaGGAGGACGAGGGGGTTGTAGGCATGTGCTTGTGC +
Preference number: 4 (lower is better)
Translates to: RERRAAEKGAIG*EDEGVVGMCLC
Trigger: GCACAAGCACATGCCTACAACCCCCTCGTCCTCCAACCCAATAGCTCCCTTCTCAGCTGCCCTCCTCTCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR TCA 90 bp GAGCCCCCTCTGTGTCGGGGACCATGCTTTGGATACTGGGATAGGCAAACCATGTGTCCCTCTCTTCTGTaGTCTCCCCATGGGACCGGG +
Preference number: 4 (lower is better)
Translates to: EPPLCRGPCFGYWDRQTMCPSLL*SPHGTG
Trigger: CCCGGTCCCATGGGGAGATCACAGAAGAGAGGGACA...CATGGTTTGCCTATCCCAGTATCCAAAGCATGGTCCCCGACACAGAGGGGGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR TCA 90 bp ATAAATTCAGCCACTGCTTCCGAACAGGACCCCTCCCTGGGACAAAAGAGCCAGGCTGGCCCAGAGAGGTaGGGAGAAATGGGAGCCGGC +
Preference number: 4 (lower is better)
Translates to: INSATASEQDPSLGQKSQAGPER*GEMGAG
Trigger: GCCGGCTCCCATTTCTCCTCACCTCTCTGGGCCAGC...CTGGCTCTTTTGTCCCAGGGAGGGGTCCTGTTCGGAAGCAGTGGCTGAATTTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000546443.5
ENST00000548263.5
ENST00000550804.6
CDS-3UTR TCA 90 bp GTATCAGAAGCAACCAGGGCTAGGAGTGGACGATTCTATTCCCACAGGGGAAGGCAGCATCCCCTGCCATaGGGCAGGGATGCGTCCCCT +
Preference number: 4 (lower is better)
Translates to: VSEATRARSGRFYSHRGRQHPLP*GRDASP
Trigger: AGGGGACGCATCCCTGCCTCATGGCAGGGGATGCTG...CCTTCCCCTGTGGGAATAGAATCGTCCACTCCTAGCCCTGGTTGCTTCTGATAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR TCA 90 bp AGGAGTGGACGATTCTATTCCCACAGGGGAAGGCCTCCTCCATCCCGGTTCCTCAGTGACAGGGACCCATaGGTTTGCTCCCTCCCCAAC +
Preference number: 4 (lower is better)
Translates to: RSGRFYSHRGRPPPSRFLSDRDP*VCSLPN
Trigger: GTTGGGGAGGGAGCAAACTCATGGGTCCCTGTCACT...GAGGAACCGGGATGGAGGAGGCCTTCCCCTGTGGGAATAGAATCGTCCACTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR TCA 90 bp ACCCACTCATGGCCAGCACACCAGGAGGCACGACAGGACAGTAACTGCCCAGCAGGCTGCTATGAAGGGTaGAGTTCTCGGCAGTGGGAA +
Preference number: 4 (lower is better)
Translates to: THSWPAHQEARQDSNCPAGCYEG*SSRQWE
Trigger: TTCCCACTGCCGAGAACTTCACCCTTCATAGCAGCC...TGCTGGGCAGTTACTGTCCTGTCGTGCCTCCTGGTGTGCTGGCCATGAGTGGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR GCA 90 bp TCAGAAGCAACCAGGGCTAGGAGTGGACGATTCTATTCCCACAGGGGAAGGCCTTACATCCCAGAAGGCTaGGCGCAAGGAGGGCGGGGA +
Preference number: 4 (lower is better)
Translates to: SEATRARSGRFYSHRGRPYIPEG*AQGGRG
Trigger: TCCCCGCCCTCCTTGCGCGCAGCCTTCTGGGATGTA...AGGCCTTCCCCTGTGGGAATAGAATCGTCCACTCCTAGCCCTGGTTGCTTCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262059.8
CDS-3UTR GCA 90 bp TCAGAAGCAACCAGGGCTAGGAGTGGACGATTCTATTCCCACAGGGGAAGGCCTCTCCTGCCTGGCAGTTaGCAGAGCCCTCTCGAGCTC +
Preference number: 4 (lower is better)
Translates to: SEATRARSGRFYSHRGRPLLPGS*QSPLEL
Trigger: GAGCTCGAGAGGGCTCTGGCAACTGCCAGGCAGGAG...AGGCCTTCCCCTGTGGGAATAGAATCGTCCACTCCTAGCCCTGGTTGCTTCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR GCA 90 bp CAGAAGCAACCAGGGCTAGGAGTGGACGATTCTATTCCCACAGGGGAAGGCCTCGTAGTTCGGCTATGGTaGGGTCCCTGGCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: QKQPGLGVDDSIPTGEGLVVRLW*GPWLLL
Trigger: CAGCAGCAGCCAGGGACCGCACCATAGCCGAACTAC...GAGGCCTTCCCCTGTGGGAATAGAATCGTCCACTCCTAGCCCTGGTTGCTTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR GCA 90 bp AGGGTGCCCCAGGAATTGGCTTTGGGGCATCAGACAAGGGAGTGTGAGTGTGAGACTCTGCAGCAGCCCTaGCCGCTCCTTGCTCCATTG +
Preference number: 4 (lower is better)
Translates to: RVPQELALGHQTRECECETLQQP*PLLAPL
Trigger: CAATGGAGCAAGGAGCGGGCAGGGCTGCTGCAGAGT...CTCACACTCACACTCCCTTGTCTGATGCCCCAAAGCCAATTCCTGGGGCACCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR GCA 90 bp GGGTCCTGGGTGCTGAAAAAGAAGTGTCCATCCATGTGGTCCTCCAGGGCATCCTGGCAGGGCCCCCAGTaGTGGTTTCTGACAGGGTAC +
Preference number: 4 (lower is better)
Translates to: GSWVLKKKCPSMWSSRASWQGPQ*WFLTGY
Trigger: GTACCCTGTCAGAAACCAGCACTGGGGGCCCTGCCA...GGATGCCCTGGAGGACCACATGGATGGACACTTCTTTTTCAGCACCCAGGACCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000548263.5
CDS-3UTR GCA 90 bp CTGAGAACCAAAAGGGACCTGAGAGGCCATGATGTCCATGCTGCTGCCTCTGTGCTGCCCAGCATCCCCTaGCATGAGGCAGGGATGCGT +
Preference number: 4 (lower is better)
Translates to: LRTKRDLRGHDVHAAASVLPSIP*HEAGMR
Trigger: ACGCATCCCTGCCTCATGGCAGGGGATGCTGGGCAG...CACAGAGGCAGCAGCATGGACATCATGGCCTCTCAGGTCCCTTTTGGTTCTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR GCA 90 bp GGAGTGGACGATTCTATTCCCACAGGGGAAGGCCTCCTCCATCCCGGTTCCTCCGGGGTTGTAGGCATGTaGTTGTGCAGGCCATTGCTG +
Preference number: 4 (lower is better)
Translates to: GVDDSIPTGEGLLHPGSSGVVGM*LCRPLL
Trigger: CAGCAATGGCCTGCACAAGCACATGCCTACAACCCC...GGAGGAACCGGGATGGAGGAGGCCTTCCCCTGTGGGAATAGAATCGTCCACTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR GCA 90 bp TTGGGGCATCAGACAAGGGAGTGTGAGTGTGAGTGTGTGTGTGCAGTGGCTGTGCAGGCGGGTGATGGATaGCTCTGTCAGCCCAGCTCG +
Preference number: 4 (lower is better)
Translates to: LGHQTRECECECVCAVAVQAGDG*LCQPSS
Trigger: CGAGCTGGGCTGACAGAGGCATCCATCACCCGCCTG...CACAGCCACTGCACACACACACTCACACTCACACTCCCTTGTCTGATGCCCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR CCA 90 bp ATCCCGGTTCCTCCAAAACCACTTTCAGGGGATAAATTCAGCCACTGCTTCCGATCGGCCACCCGCTGCTaGGCCTGGCCTAGGGTGTCC +
Preference number: 4 (lower is better)
Translates to: IPVPPKPLSGDKFSHCFRSATRC*AWPRVS
Trigger: GGACACCCTAGGCCAGGCCCAGCAGCGGGTGGCCGA...TCGGAAGCAGTGGCTGAATTTATCCCCTGAAAGTGGTTTTGGAGGAACCGGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262059.8
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CCA 90 bp AGGAGTGGACGATTCTATTCCCACAGGGGAAGGCCTCCTCCATCCCGGTTCCTCAGCAGGAGAGGAGCCTaGGTCTCCACGCTCACAAAG +
Preference number: 4 (lower is better)
Translates to: RSGRFYSHRGRPPPSRFLSRRGA*VSTLTK
Trigger: CTTTGTGAGCGTGGAGACCCAGGCTCCTCTCCTGCT...GAGGAACCGGGATGGAGGAGGCCTTCCCCTGTGGGAATAGAATCGTCCACTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000546443.5
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CCA 90 bp ACCAGGGCTAGGAGTGGACGATTCTATTCCCACAGGGGAAGGCCTCCTCCATCCAGCAGGAGAGGAGCCTaGGTCTCCACGCTCACAAAG +
Preference number: 4 (lower is better)
Translates to: TRARSGRFYSHRGRPPPSSRRGA*VSTLTK
Trigger: CTTTGTGAGCGTGGAGACCCAGGCTCCTCTCCTGCT...GGATGGAGGAGGCCTTCCCCTGTGGGAATAGAATCGTCCACTCCTAGCCCTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000546443.5
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CCA 90 bp CCAGACTCCCACTTGAGACAACCCACTCATGGCCAGCACACCAGGAGGCACGACGAAATGGGAGCCGGCTaGCTGATGACAACAAGGGGA +
Preference number: 4 (lower is better)
Translates to: PDSHLRQPTHGQHTRRHDEMGAG*LMTTRG
Trigger: TCCCCTTGTTGTCATCAGCCAGCCGGCTCCCATTTC...GTCGTGCCTCCTGGTGTGCTGGCCATGAGTGGGTTGTCTCAAGTGGGAGTCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR CCA 90 bp AGGAATTGGCTTTGGGGCATCAGACAAGGGAGTGTGAGTGTGAGTGTGTGTGTGCCTTCCATGTGGGGGTaGCAGGGCCCCCAGTGCTGG +
Preference number: 4 (lower is better)
Translates to: RNWLWGIRQGSVSVSVCVPSMWG*QGPQCW
Trigger: CCAGCACTGGGGGCCCTGCCACCCCCACATGGAAGG...CACACACACACTCACACTCACACTCCCTTGTCTGATGCCCCAAAGCCAATTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000546443.5
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CCA 90 bp ACCAGGGCTAGGAGTGGACGATTCTATTCCCACAGGGGAAGGCCTCCTCCATCCGGAAGCCAGGAGGTGTaGGTCCCAGATTCTTCTCGC +
Preference number: 4 (lower is better)
Translates to: TRARSGRFYSHRGRPPPSGSQEV*VPDSSR
Trigger: GCGAGAAGAATCTGGGACCCACACCTCCTGGCTTCC...GGATGGAGGAGGCCTTCCCCTGTGGGAATAGAATCGTCCACTCCTAGCCCTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR CCA 90 bp GAGCCCCCTCTGTGTCGGGGACCATGCTTTGGATACTGGGATAGGCAAACCATGGCCATGTGGCTCCTGTaGGTGTATGTGCGGCTTGGC +
Preference number: 4 (lower is better)
Translates to: EPPLCRGPCFGYWDRQTMAMWLL*VYVRLG
Trigger: GCCAAGCCGCACATACACCCACAGGAGCCACATGGC...CATGGTTTGCCTATCCCAGTATCCAAAGCATGGTCCCCGACACAGAGGGGGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR CCA 90 bp CCAGACTCCCACTTGAGACAACCCACTCATGGCCAGCACACCAGGAGGCACGACACTAGAATTGGAAGCTaGCTGCCCCTGGGTTTCCCC +
Preference number: 4 (lower is better)
Translates to: PDSHLRQPTHGQHTRRHDTRIGS*LPLGFP
Trigger: GGGGAAACCCAGGGGCAGCCAGCTTCCAATTCTAGT...GTCGTGCCTCCTGGTGTGCTGGCCATGAGTGGGTTGTCTCAAGTGGGAGTCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR TCA 90 bp CCAGACTCCCACTTGAGACAACCCACTCATGGCCAGCACACCAGGAGGCACGACCTTCCATCCTGGCCTTaGGATATCTGTCCTCCCAAC +
Preference number: 4 (lower is better)
Translates to: PDSHLRQPTHGQHTRRHDLPSWP*DICPPN
Trigger: GTTGGGAGGACAGATATCTCAAGGCCAGGATGGAAG...GTCGTGCCTCCTGGTGTGCTGGCCATGAGTGGGTTGTCTCAAGTGGGAGTCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR TCA 90 bp GCCATGTGGCTCCTGTGGGTGTATGTGCGGCTTGGCAGGGGCTGTGGCATGGGATCAGCACTTTCTCACTaGTGGTCTGGATGTCATCCT +
Preference number: 4 (lower is better)
Translates to: AMWLLWVYVRLGRGCGMGSALSH*WSGCHP
Trigger: AGGATGACATCCAGACCATCAGTGAGAAAGTGCTGA...TCCCATGCCACAGCCCCTGCCAAGCCGCACATACACCCACAGGAGCCACATGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR TCA 90 bp ATGAAACTGAGAACCAAAAGGGACCTGAGAGGCCATGATGTCCATGCTGCTGCCGAGCACACGCAGGGCTaGCCGCAGCTCTGTCAGCTC +
Preference number: 4 (lower is better)
Translates to: MKLRTKRDLRGHDVHAAAEHTQG*PQLCQL
Trigger: GAGCTGACAGAGCTGCGGTCAGCCCTGCGTGTGCTC...GGCAGCAGCATGGACATCATGGCCTCTCAGGTCCCTTTTGGTTCTCAGTTTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR TCA 90 bp TGCAGTGGCTGTGTATCAGAAGCAACCAGGGCTAGGAGTGGACGATTCTATTCCGAGCACACGCAGGGCTaGCCGCAGCTCTGTCAGCTC +
Preference number: 4 (lower is better)
Translates to: CSGCVSEATRARSGRFYSEHTQG*PQLCQL
Trigger: GAGCTGACAGAGCTGCGGTCAGCCCTGCGTGTGCTC...GGAATAGAATCGTCCACTCCTAGCCCTGGTTGCTTCTGATACACAGCCACTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR TCA 90 bp GGTACAGTGATGGCTGCTATGAAGGGTGAAGTTCTCGGCAGTGGGAAACTTGTCGCTGGCCCAGAGAGGTaGGGAGAAATGGGAGCCGGC +
Preference number: 4 (lower is better)
Translates to: GTVMAAMKGEVLGSGKLVAGPER*GEMGAG
Trigger: GCCGGCTCCCATTTCTCCTCACCTCTCTGGGCCAGC...GACAAGTTTCCCACTGCCGAGAACTTCACCCTTCATAGCAGCCATCACTGTACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR TCA 90 bp CAGAAGCAACCAGGGCTAGGAGTGGACGATTCTATTCCCACAGGGGAAGGCCTCCCTGGGACTAAACCCTaGGCAGAAGTGACAGGGACC +
Preference number: 4 (lower is better)
Translates to: QKQPGLGVDDSIPTGEGLPGTKP*AEVTGT
Trigger: GGTCCCTGTCACTTCTGCTCAGGGTTTAGTCCCAGG...GAGGCCTTCCCCTGTGGGAATAGAATCGTCCACTCCTAGCCCTGGTTGCTTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR TCA 90 bp AGGAGTGGACGATTCTATTCCCACAGGGGAAGGCCTCCTCCATCCCGGTTCCTCTGGAGGAGGGGAGTATaGAGCAGATTCGGGACAGTG +
Preference number: 4 (lower is better)
Translates to: RSGRFYSHRGRPPPSRFLWRRGV*SRFGTV
Trigger: CACTGTCCCGAATCTGCTTCATACTCCCCTCCTCCA...GAGGAACCGGGATGGAGGAGGCCTTCCCCTGTGGGAATAGAATCGTCCACTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR TCA 90 bp GGAGTGGACGATTCTATTCCCACAGGGGAAGGCCTCCTCCATCCCGGTTCCTCCCAGAAGGGGACAATCTaGTACCTGAAACCCCCACCT +
Preference number: 4 (lower is better)
Translates to: GVDDSIPTGEGLLHPGSSQKGTI*YLKPPP
Trigger: AGGTGGGGGTTTCAGGTATCAGATTGTCCCCTTCTG...GGAGGAACCGGGATGGAGGAGGCCTTCCCCTGTGGGAATAGAATCGTCCACTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000548263.5
CDS-3UTR GCA 90 bp GGAGTGGACGATTCTATTCCCACAGGGGAAGGCCTCCTCCATCCCGGTTCCTCCAGGTCATTCCGTTCTTaGTGGCTCTCATCGAGCTGG +
Preference number: 4 (lower is better)
Translates to: GVDDSIPTGEGLLHPGSSRSFRS*WLSSSW
Trigger: CCAGCTCGATGAGAGCCAGCAAGAACGGAATGACCT...GGAGGAACCGGGATGGAGGAGGCCTTCCCCTGTGGGAATAGAATCGTCCACTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR GCA 90 bp GCCATGTGGCTCCTGTGGGTGTATGTGCGGCTTGGCAGGGGCTGTGGCATGGGAAGCTGTAGCTTCAGCTaGATCAGGTCATTCCGTTCT +
Preference number: 4 (lower is better)
Translates to: AMWLLWVYVRLGRGCGMGSCSFS*IRSFRS
Trigger: AGAACGGAATGACCTGATGCAGCTGAAGCTACAGCT...TCCCATGCCACAGCCCCTGCCAAGCCGCACATACACCCACAGGAGCCACATGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR GCA 90 bp CGATTCTATTCCCACAGGGGAAGGCCTCCTCCATCCCGGTTCCTCCAAAACCACACATGGTCTCCCTGTTaGCGGCTCAGGATGTCCCTC +
Preference number: 4 (lower is better)
Translates to: RFYSHRGRPPPSRFLQNHTWSPC*RLRMSL
Trigger: GAGGGACATCCTGAGCCGGCAACAGGGAGACCATGT...GTGGTTTTGGAGGAACCGGGATGGAGGAGGCCTTCCCCTGTGGGAATAGAATCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR GCA 90 bp GAGAAGGGAGCTATTGGGTTGGAGGACGAGGGGGTTGTAGGCATGTGCTTGTGCACATGGTCTCCCTGTTaGCGGCTCAGGATGTCCCTC +
Preference number: 4 (lower is better)
Translates to: EKGAIGLEDEGVVGMCLCTWSPC*RLRMSL
Trigger: GAGGGACATCCTGAGCCGGCAACAGGGAGACCATGT...GCACAAGCACATGCCTACAACCCCCTCGTCCTCCAACCCAATAGCTCCCTTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR GCA 90 bp CCAGACTCCCACTTGAGACAACCCACTCATGGCCAGCACACCAGGAGGCACGACATGGTTCTCCTGTTGTaGCACTTGGAGCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: PDSHLRQPTHGQHTRRHDMVLLL*HLELSL
Trigger: GAGGCTGAGCTCCAAGTGGCACAACAGGAGAACCAT...GTCGTGCCTCCTGGTGTGCTGGCCATGAGTGGGTTGTCTCAAGTGGGAGTCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR GCA 90 bp AGGAATTGGCTTTGGGGCATCAGACAAGGGAGTGTGAGTGTGAGTGTGTGTGTGGCGGTCCCTGGCTGCTaGTGCACTGGCCAACTCCTC +
Preference number: 4 (lower is better)
Translates to: RNWLWGIRQGSVSVSVCVAVPGC*CTGQLL
Trigger: GAGGAGTTGGCCAGTGCAGCAGCAGCCAGGGACCGC...CACACACACACTCACACTCACACTCCCTTGTCTGATGCCCCAAAGCCAATTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR GCA 90 bp TGTGTATCAGAAGCAACCAGGGCTAGGAGTGGACGATTCTATTCCCACAGGGGAGCGGTCCCTGGCTGCTaGTGCACTGGCCAACTCCTC +
Preference number: 4 (lower is better)
Translates to: CVSEATRARSGRFYSHRGAVPGC*CTGQLL
Trigger: GAGGAGTTGGCCAGTGCAGCAGCAGCCAGGGACCGC...TCCCCTGTGGGAATAGAATCGTCCACTCCTAGCCCTGGTTGCTTCTGATACACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR GCA 90 bp CTCCAAAACCACTTTCAGGGGATAAATTCAGCCACTGCTTCCGAACAGGACCCCGCGGTCCCTGGCTGCTaGTGCACTGGCCAACTCCTC +
Preference number: 4 (lower is better)
Translates to: LQNHFQGINSATASEQDPAVPGC*CTGQLL
Trigger: GAGGAGTTGGCCAGTGCAGCAGCAGCCAGGGACCGC...GGGGTCCTGTTCGGAAGCAGTGGCTGAATTTATCCCCTGAAAGTGGTTTTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR GCA 90 bp AAACTGAGAACCAAAAGGGACCTGAGAGGCCATGATGTCCATGCTGCTGCCTCTGGTGCGGTCCCTGGCTaGTGCTGCACTGGCCAACTC +
Preference number: 4 (lower is better)
Translates to: KLRTKRDLRGHDVHAAASGAVPG*CCTGQL
Trigger: GAGTTGGCCAGTGCAGCAGCAGCCAGGGACCGCACC...AGAGGCAGCAGCATGGACATCATGGCCTCTCAGGTCCCTTTTGGTTCTCAGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR GCA 90 bp TTGAGCCCCCTCTGTGTCGGGGACCATGCTTTGGATACTGGGATAGGCAAACCACCACTTCCAGGCGGCTaGGGTGTAGTTCGGCTATGG +
Preference number: 4 (lower is better)
Translates to: LSPLCVGDHALDTGIGKPPLPGG*GVVRLW
Trigger: CCATAGCCGAACTACACCGCAGCCGCCTGGAAGTGG...TGGTTTGCCTATCCCAGTATCCAAAGCATGGTCCCCGACACAGAGGGGGCTCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR GCA 90 bp TCAGAAGCAACCAGGGCTAGGAGTGGACGATTCTATTCCCACAGGGGAAGGCCTTGGCAGGGCCCCCAGTaGTGGTTTCTGACAGGGTAC +
Preference number: 4 (lower is better)
Translates to: SEATRARSGRFYSHRGRPWQGPQ*WFLTGY
Trigger: GTACCCTGTCAGAAACCAGCACTGGGGGCCCTGCCA...AGGCCTTCCCCTGTGGGAATAGAATCGTCCACTCCTAGCCCTGGTTGCTTCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000546443.5
ENST00000548263.5
ENST00000550804.6
CDS-3UTR GCA 90 bp TCAGAAGCAACCAGGGCTAGGAGTGGACGATTCTATTCCCACAGGGGAAGGCCTGCCATGAGGCAGGGATaGGTCCCCTCTTTCCCTCCT +
Preference number: 4 (lower is better)
Translates to: SEATRARSGRFYSHRGRPAMRQG*VPSFPP
Trigger: AGGAGGGAAAGAGGGGACGCATCCCTGCCTCATGGC...AGGCCTTCCCCTGTGGGAATAGAATCGTCCACTCCTAGCCCTGGTTGCTTCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR GCA 90 bp AGGGTGCCCCAGGAATTGGCTTTGGGGCATCAGACAAGGGAGTGTGAGTGTGAGTCCCAGTCTTCTCTCTaGTCCTATCCCTGGGGGCCA +
Preference number: 4 (lower is better)
Translates to: RVPQELALGHQTRECECESQSSL*SYPWGP
Trigger: TGGCCCCCAGGGATAGGAGCAGAGAGAAGACTGGGA...CTCACACTCACACTCCCTTGTCTGATGCCCCAAAGCCAATTCCTGGGGCACCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000548263.5
CDS-3UTR GCA 90 bp GGGTTCCCAGGTTATCCTGTGCCTAATGCAGCATCCTGGCCTCTCCCACAGCGTAGAGCAGGACCCATGTaGCTGGGTTCCCAGGTTATC +
Preference number: 4 (lower is better)
Translates to: GFPGYPVPNAASWPLPQRRAGPM*LGSQVI
Trigger: GATAACCTGGGAACCCAGGCACATGGGTCCTGCTCT...ACGCTGTGGGAGAGGCCAGGATGCTGCATTAGGCACAGGATAACCTGGGAACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548263.5
CDS-3UTR CCA 90 bp GGAGTGGACGATTCTATTCCCACAGGGGAAGGCCTCCTCCATCCCGGTTCCTCCATTCCACCTTGGTGTTaGGGATGTAGGTCCGGGCTA +
Preference number: 4 (lower is better)
Translates to: GVDDSIPTGEGLLHPGSSIPPWC*GCRSGL
Trigger: TAGCCCGGACCTACATCCCCAACACCAAGGTGGAAT...GGAGGAACCGGGATGGAGGAGGCCTTCCCCTGTGGGAATAGAATCGTCCACTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CCA 90 bp CGATTCTATTCCCACAGGGGAAGGCCTCCTCCATCCCGGTTCCTCCAAAACCACTGCCAATCCAGTCACTaGCACTGGGCATGGTGCCTG +
Preference number: 4 (lower is better)
Translates to: RFYSHRGRPPPSRFLQNHCQSSH*HWAWCL
Trigger: CAGGCACCATGCCCAGTGCCAGTGACTGGATTGGCA...GTGGTTTTGGAGGAACCGGGATGGAGGAGGCCTTCCCCTGTGGGAATAGAATCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CCA 90 bp GAGCCCCCTCTGTGTCGGGGACCATGCTTTGGATACTGGGATAGGCAAACCATGGTAGAGCTGAGCTCCTaGTTTGGGCAGGTAGCTGGC +
Preference number: 4 (lower is better)
Translates to: EPPLCRGPCFGYWDRQTMVELSS*FGQVAG
Trigger: GCCAGCTACCTGCCCAAACCAGGAGCTCAGCTCTAC...CATGGTTTGCCTATCCCAGTATCCAAAGCATGGTCCCCGACACAGAGGGGGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR CCA 90 bp AGACTTCGGAGAGCAGGACCCATGTGCCTGGGTTCCCAGGTTATCCTGTGCCTACTCTGCCCACACACCTaGCCCTGGCGGTTCACATAT +
Preference number: 4 (lower is better)
Translates to: RLRRAGPMCLGSQVILCLLCPHT*PWRFTY
Trigger: ATATGTGAACCGCCAGGGCCAGGTGTGTGGGCAGAG...TAGGCACAGGATAACCTGGGAACCCAGGCACATGGGTCCTGCTCTCCGAAGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548263.5
CDS-3UTR CCA 90 bp ACCAGGGCTAGGAGTGGACGATTCTATTCCCACAGGGGAAGGCCTCCTCCATCCTCTGTGATCTCCCCATaGGACCGGGAAATCCCCTTG +
Preference number: 4 (lower is better)
Translates to: TRARSGRFYSHRGRPPPSSVISP*DREIPL
Trigger: CAAGGGGATTTCCCGGTCCCATGGGGAGATCACAGA...GGATGGAGGAGGCCTTCCCCTGTGGGAATAGAATCGTCCACTCCTAGCCCTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CCA 90 bp TCAGAAGCAACCAGGGCTAGGAGTGGACGATTCTATTCCCACAGGGGAAGGCCTAGGATGCGTGCCACATaGTCTCCCTGTTGCCGGCTC +
Preference number: 4 (lower is better)
Translates to: SEATRARSGRFYSHRGRPRMRAT*SPCCRL
Trigger: GAGCCGGCAACAGGGAGACCATGTGGCACGCATCCT...AGGCCTTCCCCTGTGGGAATAGAATCGTCCACTCCTAGCCCTGGTTGCTTCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CCA 90 bp TGCAGTGGCTGTGTATCAGAAGCAACCAGGGCTAGGAGTGGACGATTCTATTCCGAGGCTGCAAGCTCCTaGGCCCCTCGAAGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: CSGCVSEATRARSGRFYSEAASS*APRSCS
Trigger: GGAGCAGCTTCGAGGGGCCCAGGAGCTTGCAGCCTC...GGAATAGAATCGTCCACTCCTAGCCCTGGTTGCTTCTGATACACAGCCACTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CCA 90 bp ACGATTCTATTCCCACAGGGGAAGGCCTCCTCCATCCCGGTTCCTCCAAAACCAGGTGTAGTTCGGCTATaGTGCGGTCCCTGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: TILFPQGKASSIPVPPKPGVVRL*CGPWLL
Trigger: CAGCAGCCAGGGACCGCACCATAGCCGAACTACACC...TGGTTTTGGAGGAACCGGGATGGAGGAGGCCTTCCCCTGTGGGAATAGAATCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CCA 90 bp GGAGTGGACGATTCTATTCCCACAGGGGAAGGCCTCCTCCATCCCGGTTCCTCCCCTCCTCATCCTCTGTaGTGGCATCCTCATTCCACT +
Preference number: 4 (lower is better)
Translates to: GVDDSIPTGEGLLHPGSSPPHPL*WHPHST
Trigger: AGTGGAATGAGGATGCCACCACAGAGGATGAGGAGG...GGAGGAACCGGGATGGAGGAGGCCTTCCCCTGTGGGAATAGAATCGTCCACTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000546443.5
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CCA 90 bp GGAGTGGACGATTCTATTCCCACAGGGGAAGGCCTCCTCCATCCCGGTTCCTCCACAAAGGCCATAGGGTaGGAGCCTCATGTCTTCTGG +
Preference number: 4 (lower is better)
Translates to: GVDDSIPTGEGLLHPGSSTKAIG*EPHVFW
Trigger: CCAGAAGACATGAGGCTCCCACCCTATGGCCTTTGT...GGAGGAACCGGGATGGAGGAGGCCTTCCCCTGTGGGAATAGAATCGTCCACTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000546443.5
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CCA 90 bp CAGAAGCAACCAGGGCTAGGAGTGGACGATTCTATTCCCACAGGGGAAGGCCTCAGCAGGAGAGGAGCCTaGGTCTCCACGCTCACAAAG +
Preference number: 4 (lower is better)
Translates to: QKQPGLGVDDSIPTGEGLSRRGA*VSTLTK
Trigger: CTTTGTGAGCGTGGAGACCCAGGCTCCTCTCCTGCT...GAGGCCTTCCCCTGTGGGAATAGAATCGTCCACTCCTAGCCCTGGTTGCTTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000546443.5
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CCA 90 bp AGGAGTGGACGATTCTATTCCCACAGGGGAAGGCCTCCTCCATCCCGGTTCCTCGAAATGGGAGCCGGCTaGCTGATGACAACAAGGGGA +
Preference number: 4 (lower is better)
Translates to: RSGRFYSHRGRPPPSRFLEMGAG*LMTTRG
Trigger: TCCCCTTGTTGTCATCAGCCAGCCGGCTCCCATTTC...GAGGAACCGGGATGGAGGAGGCCTTCCCCTGTGGGAATAGAATCGTCCACTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000546443.5
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CCA 90 bp CGATTCTATTCCCACAGGGGAAGGCCTCCTCCATCCCGGTTCCTCCAAAACCACGCTACTGTCCTCAGCTaGCCCAGAGAGGTGAGGAGA +
Preference number: 4 (lower is better)
Translates to: RFYSHRGRPPPSRFLQNHATVLS*PREVRR
Trigger: TCTCCTCACCTCTCTGGGCCAGCTGAGGACAGTAGC...GTGGTTTTGGAGGAACCGGGATGGAGGAGGCCTTCCCCTGTGGGAATAGAATCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000546443.5
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CCA 90 bp CTGAGAACCAAAAGGGACCTGAGAGGCCATGATGTCCATGCTGCTGCCTCTGTGCAGGGCCCCCAGTGCTaGTTTCTGACAGGGTACCCA +
Preference number: 4 (lower is better)
Translates to: LRTKRDLRGHDVHAAASVQGPQC*FLTGYP
Trigger: TGGGTACCCTGTCAGAAACCAGCACTGGGGGCCCTG...CACAGAGGCAGCAGCATGGACATCATGGCCTCTCAGGTCCCTTTTGGTTCTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000546443.5
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CCA 90 bp TCCATCCCGGTTCCTCCAAAACCACTTTCAGGGGATAAATTCAGCCACTGCTTCCCTTCCATGTGGGGGTaGCAGGGCCCCCAGTGCTGG +
Preference number: 4 (lower is better)
Translates to: SIPVPPKPLSGDKFSHCFPSMWG*QGPQCW
Trigger: CCAGCACTGGGGGCCCTGCCACCCCCACATGGAAGG...GAAGCAGTGGCTGAATTTATCCCCTGAAAGTGGTTTTGGAGGAACCGGGATGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000546443.5
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CCA 90 bp CGATTCTATTCCCACAGGGGAAGGCCTCCTCCATCCCGGTTCCTCCAAAACCACGAGACAACCCACTCATaGCCAGCACACCAGGAGGCA +
Preference number: 4 (lower is better)
Translates to: RFYSHRGRPPPSRFLQNHETTHS*PAHQEA
Trigger: TGCCTCCTGGTGTGCTGGCCATGAGTGGGTTGTCTC...GTGGTTTTGGAGGAACCGGGATGGAGGAGGCCTTCCCCTGTGGGAATAGAATCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR CCA 90 bp GAGCCCCCTCTGTGTCGGGGACCATGCTTTGGATACTGGGATAGGCAAACCATGAAGGCAGCCACTCACTaGAAGCCAGGAGGTGTGGGT +
Preference number: 4 (lower is better)
Translates to: EPPLCRGPCFGYWDRQTMKAATH*KPGGVG
Trigger: ACCCACACCTCCTGGCTTCCAGTGAGTGGCTGCCTT...CATGGTTTGCCTATCCCAGTATCCAAAGCATGGTCCCCGACACAGAGGGGGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR CCA 90 bp ATAAATTCAGCCACTGCTTCCGAACAGGACCCCTCCCTGGGACAAAAGAGCCAGGGTGTATGTGCGGCTTaGCAGGGGCTGTGGCATGGG +
Preference number: 4 (lower is better)
Translates to: INSATASEQDPSLGQKSQGVCAA*QGLWHG
Trigger: CCCATGCCACAGCCCCTGCCAAGCCGCACATACACC...CTGGCTCTTTTGTCCCAGGGAGGGGTCCTGTTCGGAAGCAGTGGCTGAATTTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR CCA 90 bp GCCATGTGGCTCCTGTGGGTGTATGTGCGGCTTGGCAGGGGCTGTGGCATGGGATTGAGGTTCGATAAGTaGGGGAGTGGTGTGTTTGGA +
Preference number: 4 (lower is better)
Translates to: AMWLLWVYVRLGRGCGMGLRFDK*GSGVFG
Trigger: TCCAAACACACCACTCCCCCACTTATCGAACCTCAA...TCCCATGCCACAGCCCCTGCCAAGCCGCACATACACCCACAGGAGCCACATGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
3UTR CAA 72 bp TCCCCAACTGCCGCATTATCCAAGCCAGACTCCCACTaGAGACAACCCACTCATGGCCAGCACACCAGGAGG +
Preference number: 4 (lower is better)
Translates to: SPTAALSKPDSH*RQPTHGQHTRR
Trigger: CCTCCTGGTGTGCTGGCCATGAGTGGGTTGTCTCAAGTGGGAGTCTGGCTTGGATAATGCGGCAGTTGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
3UTR CAA 72 bp GACGAGGGGGTTGTAGGCATGTGCTTGTGCAGGCCATaGCTGAGAGCCTTGGTGAGCGTGCAGGTCCTTAAC +
Preference number: 4 (lower is better)
Translates to: DEGVVGMCLCRP*LRALVSVQVLN
Trigger: GTTAAGGACCTGCACGCTCACCAAGGCTCTCAGCAATGGCCTGCACAAGCACATGCCTACAACCCCCTCGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
3UTR CAA 72 bp ATTGGGTTGGAGGACGAGGGGGTTGTAGGCATGTGCTaGTGCAGGCCATTGCTGAGAGCCTTGGTGAGCGTG +
Preference number: 4 (lower is better)
Translates to: IGLEDEGVVGMC*CRPLLRALVSV
Trigger: CACGCTCACCAAGGCTCTCAGCAATGGCCTGCACAAGCACATGCCTACAACCCCCTCGTCCTCCAACCCAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR TCA 90 bp AGGGTGCCCCAGGAATTGGCTTTGGGGCATCAGACAAGGGAGTGTGAGTGTGAGTGGGTCCTCTCCTCCTaGACTGCCTTCTCCAATCGA +
Preference number: 4 (lower is better)
Translates to: RVPQELALGHQTRECECEWVLSS*TAFSNR
Trigger: TCGATTGGAGAAGGCAGTTCAGGAGGAGAGGACCCA...CTCACACTCACACTCCCTTGTCTGATGCCCCAAAGCCAATTCCTGGGGCACCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR TCA 90 bp CAGAAGCAACCAGGGCTAGGAGTGGACGATTCTATTCCCACAGGGGAAGGCCTCTGGGTCCTCTCCTCCTaGACTGCCTTCTCCAATCGA +
Preference number: 4 (lower is better)
Translates to: QKQPGLGVDDSIPTGEGLWVLSS*TAFSNR
Trigger: TCGATTGGAGAAGGCAGTTCAGGAGGAGAGGACCCA...GAGGCCTTCCCCTGTGGGAATAGAATCGTCCACTCCTAGCCCTGGTTGCTTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR TCA 90 bp CCAGACTCCCACTTGAGACAACCCACTCATGGCCAGCACACCAGGAGGCACGACCTCATAATTCCTCTCTaGTTAACCCCCACTACCCCG +
Preference number: 4 (lower is better)
Translates to: PDSHLRQPTHGQHTRRHDLIIPL*LTPTTP
Trigger: CGGGGTAGTGGGGGTTAATCAGAGAGGAATTATGAG...GTCGTGCCTCCTGGTGTGCTGGCCATGAGTGGGTTGTCTCAAGTGGGAGTCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR TCA 90 bp TTGAGCCCCCTCTGTGTCGGGGACCATGCTTTGGATACTGGGATAGGCAAACCAGCAGATTCGGGACAGTaGAGCAGAACAGGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: LSPLCVGDHALDTGIGKPADSGQ*SRTGLE
Trigger: CTCCAGCCCTGTTCTGCTTCACTGTCCCGAATCTGC...TGGTTTGCCTATCCCAGTATCCAAAGCATGGTCCCCGACACAGAGGGGGCTCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR GCA 90 bp ATAAATTCAGCCACTGCTTCCGAACAGGACCCCTCCCTGGGACAAAAGAGCCAGGCGCCCTTTTGCCGCTaGGTGCTCGGATCTAGGACT +
Preference number: 4 (lower is better)
Translates to: INSATASEQDPSLGQKSQAPFCR*VLGSRT
Trigger: AGTCCTAGATCCGAGCACGCAGCGGCAAAAGGGCGC...CTGGCTCTTTTGTCCCAGGGAGGGGTCCTGTTCGGAAGCAGTGGCTGAATTTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262059.8
CDS-3UTR GCA 90 bp AGAGAGGGTAGGGTGCCCCAGGAATTGGCTTTGGGGCATCAGACAAGGGAGTGTGGTTTGTGGTTCTTCTaGGCCCTTTTGCCGCTGCGT +
Preference number: 4 (lower is better)
Translates to: REGRVPQELALGHQTRECGLWFF*ALLPLR
Trigger: ACGCAGCGGCAAAAGGGCGCAGAAGAACCACAAACC...ACACTCCCTTGTCTGATGCCCCAAAGCCAATTCCTGGGGCACCCTACCCTCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262059.8
CDS-3UTR GCA 90 bp TGTGTATCAGAAGCAACCAGGGCTAGGAGTGGACGATTCTATTCCCACAGGGGAGCCCTCTCGAGCTCCTaGACTCGGCTCCTCAGCTCT +
Preference number: 4 (lower is better)
Translates to: CVSEATRARSGRFYSHRGALSSS*TRLLSS
Trigger: AGAGCTGAGGAGCCGAGTGCAGGAGCTCGAGAGGGC...TCCCCTGTGGGAATAGAATCGTCCACTCCTAGCCCTGGTTGCTTCTGATACACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR GCA 90 bp ATGAAACTGAGAACCAAAAGGGACCTGAGAGGCCATGATGTCCATGCTGCTGCCCTCCTGCCTGGCAGTTaGCAGAGCCCTCTCGAGCTC +
Preference number: 4 (lower is better)
Translates to: MKLRTKRDLRGHDVHAAALLPGS*QSPLEL
Trigger: GAGCTCGAGAGGGCTCTGGCAACTGCCAGGCAGGAG...GGCAGCAGCATGGACATCATGGCCTCTCAGGTCCCTTTTGGTTCTCAGTTTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR GCA 90 bp AAACTGAGAACCAAAAGGGACCTGAGAGGCCATGATGTCCATGCTGCTGCCTCTCTCCTGCCTGGCAGTTaGCAGAGCCCTCTCGAGCTC +
Preference number: 4 (lower is better)
Translates to: KLRTKRDLRGHDVHAAASLLPGS*QSPLEL
Trigger: GAGCTCGAGAGGGCTCTGGCAACTGCCAGGCAGGAG...AGAGGCAGCAGCATGGACATCATGGCCTCTCAGGTCCCTTTTGGTTCTCAGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR GCA 90 bp CTCCAAAACCACTTTCAGGGGATAAATTCAGCCACTGCTTCCGAACAGGACCCCCTCCTGCCTGGCAGTTaGCAGAGCCCTCTCGAGCTC +
Preference number: 4 (lower is better)
Translates to: LQNHFQGINSATASEQDPLLPGS*QSPLEL
Trigger: GAGCTCGAGAGGGCTCTGGCAACTGCCAGGCAGGAG...GGGGTCCTGTTCGGAAGCAGTGGCTGAATTTATCCCCTGAAAGTGGTTTTGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR GCA 90 bp CTGAGAACCAAAAGGGACCTGAGAGGCCATGATGTCCATGCTGCTGCCTCTGTGACATGGTCTCCCTGTTaGCGGCTCAGGATGTCCCTC +
Preference number: 4 (lower is better)
Translates to: LRTKRDLRGHDVHAAASVTWSPC*RLRMSL
Trigger: GAGGGACATCCTGAGCCGGCAACAGGGAGACCATGT...CACAGAGGCAGCAGCATGGACATCATGGCCTCTCAGGTCCCTTTTGGTTCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR GCA 90 bp ACCAGGGCTAGGAGTGGACGATTCTATTCCCACAGGGGAAGGCCTCCTCCATCCATGGTTCTCCTGTTGTaGCACTTGGAGCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: TRARSGRFYSHRGRPPPSMVLLL*HLELSL
Trigger: GAGGCTGAGCTCCAAGTGGCACAACAGGAGAACCAT...GGATGGAGGAGGCCTTCCCCTGTGGGAATAGAATCGTCCACTCCTAGCCCTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262059.8
ENST00000548263.5
ENST00000550804.6
CDS-3UTR GCA 90 bp TTGAGCCCCCTCTGTGTCGGGGACCATGCTTTGGATACTGGGATAGGCAAACCAGCACTCTGCTCCTCTTaGCAGCTCTTCGCCTCCTTC +
Preference number: 4 (lower is better)
Translates to: LSPLCVGDHALDTGIGKPALCSS*QLFASF
Trigger: GAAGGAGGCGAAGAGCTGGCAAGAGGAGCAGAGTGC...TGGTTTGCCTATCCCAGTATCCAAAGCATGGTCCCCGACACAGAGGGGGCTCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR GCA 90 bp CTCAAAGGTGAAGGGGTCCTGGGTGCTGAAAAAGAAGTGTCCATCCATGTGGTCTGGGCCCCTCGAAGCTaGTCCTTCAAGGGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: LKGEGVLGAEKEVSIHVVWAPRS*SFKGSS
Trigger: GCTGGAGCCCTTGAAGGAGCAGCTTCGAGGGGCCCA...GACCACATGGATGGACACTTCTTTTTCAGCACCCAGGACCCCTTCACCTTTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000548263.5
CDS-3UTR GCA 90 bp ATCCCGGTTCCTCCAAAACCACTTTCAGGGGATAAATTCAGCCACTGCTTCCGAGCGGTCCCTGGCTGCTaGTGCACTGGCCAACTCCTC +
Preference number: 4 (lower is better)
Translates to: IPVPPKPLSGDKFSHCFRAVPGC*CTGQLL
Trigger: GAGGAGTTGGCCAGTGCAGCAGCAGCCAGGGACCGC...TCGGAAGCAGTGGCTGAATTTATCCCCTGAAAGTGGTTTTGGAGGAACCGGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR GCA 90 bp ATAAATTCAGCCACTGCTTCCGAACAGGACCCCTCCCTGGGACAAAAGAGCCAGCCACTTCCAGGCGGCTaGGGTGTAGTTCGGCTATGG +
Preference number: 4 (lower is better)
Translates to: INSATASEQDPSLGQKSQPLPGG*GVVRLW
Trigger: CCATAGCCGAACTACACCGCAGCCGCCTGGAAGTGG...CTGGCTCTTTTGTCCCAGGGAGGGGTCCTGTTCGGAAGCAGTGGCTGAATTTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR GCA 90 bp GTATCAGAAGCAACCAGGGCTAGGAGTGGACGATTCTATTCCCACAGGGGAAGGCCACTTCCAGGCGGCTaGGGTGTAGTTCGGCTATGG +
Preference number: 4 (lower is better)
Translates to: VSEATRARSGRFYSHRGRPLPGG*GVVRLW
Trigger: CCATAGCCGAACTACACCGCAGCCGCCTGGAAGTGG...CCTTCCCCTGTGGGAATAGAATCGTCCACTCCTAGCCCTGGTTGCTTCTGATAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR GCA 90 bp TCCATCCCGGTTCCTCCAAAACCACTTTCAGGGGATAAATTCAGCCACTGCTTCTCTGCCTCCACACTCTaGAGCAGCCCTGCCCGCTCC +
Preference number: 4 (lower is better)
Translates to: SIPVPPKPLSGDKFSHCFSASTL*SSPARS
Trigger: GGAGCGGGCAGGGCTGCTGCAGAGTGTGGAGGCAGA...GAAGCAGTGGCTGAATTTATCCCCTGAAAGTGGTTTTGGAGGAACCGGGATGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR GCA 90 bp CGATTCTATTCCCACAGGGGAAGGCCTCCTCCATCCCGGTTCCTCCAAAACCACATTCCACTTCTCATCTaGCACCTTCTCCAGGCGGGC +
Preference number: 4 (lower is better)
Translates to: RFYSHRGRPPPSRFLQNHIPLLI*HLLQAG
Trigger: GCCCGCCTGGAGAAGGTGGCAGATGAGAAGTGGAAT...GTGGTTTTGGAGGAACCGGGATGGAGGAGGCCTTCCCCTGTGGGAATAGAATCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000546443.5
ENST00000548263.5
ENST00000550804.6
CDS-3UTR GCA 90 bp AGAGAGGGTAGGGTGCCCCAGGAATTGGCTTTGGGGCATCAGACAAGGGAGTGTATTCCACTTCTCATCTaGCACCTTCTCCAGGCGGGC +
Preference number: 4 (lower is better)
Translates to: REGRVPQELALGHQTRECIPLLI*HLLQAG
Trigger: GCCCGCCTGGAGAAGGTGGCAGATGAGAAGTGGAAT...ACACTCCCTTGTCTGATGCCCCAAAGCCAATTCCTGGGGCACCCTACCCTCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000546443.5
ENST00000548263.5
ENST00000550804.6
CDS-3UTR GCA 90 bp ACCCACTCATGGCCAGCACACCAGGAGGCACGACAGGACAGTAACTGCCCAGCAGATAAATTCAGCCACTaGTTCCGAACAGGACCCCTC +
Preference number: 4 (lower is better)
Translates to: THSWPAHQEARQDSNCPADKFSH*FRTGPL
Trigger: GAGGGGTCCTGTTCGGAAGCAGTGGCTGAATTTATC...TGCTGGGCAGTTACTGTCCTGTCGTGCCTCCTGGTGTGCTGGCCATGAGTGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR GCA 90 bp ATAAATTCAGCCACTGCTTCCGAACAGGACCCCTCCCTGGGACAAAAGAGCCAGGCCATGAGGCAGGGATaGGTCCCCTCTTTCCCTCCT +
Preference number: 4 (lower is better)
Translates to: INSATASEQDPSLGQKSQAMRQG*VPSFPP
Trigger: AGGAGGGAAAGAGGGGACGCATCCCTGCCTCATGGC...CTGGCTCTTTTGTCCCAGGGAGGGGTCCTGTTCGGAAGCAGTGGCTGAATTTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR GCA 90 bp ACGATTCTATTCCCACAGGGGAAGGCCTCCTCCATCCCGGTTCCTCCAAAACCACGACAGGACAGTAACTaGCCAGCATCCCCTGCCATG +
Preference number: 4 (lower is better)
Translates to: TILFPQGKASSIPVPPKPRQDSN*PASPAM
Trigger: CATGGCAGGGGATGCTGGGCAGTTACTGTCCTGTCG...TGGTTTTGGAGGAACCGGGATGGAGGAGGCCTTCCCCTGTGGGAATAGAATCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR GCA 90 bp GGTACAGTGATGGCTGCTATGAAGGGTGAAGTTCTCGGCAGTGGGAAACTTGTCCAGGCGGGTGATGGATaGCTCTGTCAGCCCAGCTCG +
Preference number: 4 (lower is better)
Translates to: GTVMAAMKGEVLGSGKLVQAGDG*LCQPSS
Trigger: CGAGCTGGGCTGACAGAGGCATCCATCACCCGCCTG...GACAAGTTTCCCACTGCCGAGAACTTCACCCTTCATAGCAGCCATCACTGTACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR GCA 90 bp ACCAGGGCTAGGAGTGGACGATTCTATTCCCACAGGGGAAGGCCTCCTCCATCCCTGTGTCGGGGACCATaGTTTGGATACTGGGATAGG +
Preference number: 4 (lower is better)
Translates to: TRARSGRFYSHRGRPPPSLCRGP*FGYWDR
Trigger: CCTATCCCAGTATCCAAAGCATGGTCCCCGACACAG...GGATGGAGGAGGCCTTCCCCTGTGGGAATAGAATCGTCCACTCCTAGCCCTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR GCA 90 bp TCAGAAGCAACCAGGGCTAGGAGTGGACGATTCTATTCCCACAGGGGAAGGCCTGGGAGAGGGTCGGCGTaGTCTGTTCCCTTCTTGACT +
Preference number: 4 (lower is better)
Translates to: SEATRARSGRFYSHRGRPGRGSA*SVPFLT
Trigger: AGTCAAGAAGGGAACAGAGCACGCCGACCCTCTCCC...AGGCCTTCCCCTGTGGGAATAGAATCGTCCACTCCTAGCCCTGGTTGCTTCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548263.5
CDS-3UTR CCA 90 bp ACCCACTCATGGCCAGCACACCAGGAGGCACGACAGGACAGTAACTGCCCAGCAAGTGACATTCCACCTTaGTGTTGGGGATGTAGGTCC +
Preference number: 4 (lower is better)
Translates to: THSWPAHQEARQDSNCPASDIPP*CWGCRS
Trigger: GGACCTACATCCCCAACACCAAGGTGGAATGTCACT...TGCTGGGCAGTTACTGTCCTGTCGTGCCTCCTGGTGTGCTGGCCATGAGTGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR CCA 90 bp TCAGAAGCAACCAGGGCTAGGAGTGGACGATTCTATTCCCACAGGGGAAGGCCTTGCCAATCCAGTCACTaGCACTGGGCATGGTGCCTG +
Preference number: 4 (lower is better)
Translates to: SEATRARSGRFYSHRGRPCQSSH*HWAWCL
Trigger: CAGGCACCATGCCCAGTGCCAGTGACTGGATTGGCA...AGGCCTTCCCCTGTGGGAATAGAATCGTCCACTCCTAGCCCTGGTTGCTTCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CCA 90 bp GTCCTCCAGGGCATCCTTGTCACTCTCAGCAGGAAAGCGCTCCTTACAGATAGGGCTGAGCTCCTGGTTTaGGCAGGTAGCTGGCTTGGA +
Preference number: 4 (lower is better)
Translates to: VLQGILVTLSRKALLTDRAELLV*AGSWLG
Trigger: TCCAAGCCAGCTACCTGCCCAAACCAGGAGCTCAGC...CCTATCTGTAAGGAGCGCTTTCCTGCTGAGAGTGACAAGGATGCCCTGGAGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548263.5
CDS-3UTR CCA 90 bp TTGGGGCATCAGACAAGGGAGTGTGAGTGTGAGTGTGTGTGTGCAGTGGCTGTGCCACACACCTGGCCCTaGCGGTTCACATATCGGAAC +
Preference number: 4 (lower is better)
Translates to: LGHQTRECECECVCAVAVPHTWP*RFTYRN
Trigger: GTTCCGATATGTGAACCGCCAGGGCCAGGTGTGTGG...CACAGCCACTGCACACACACACTCACACTCACACTCCCTTGTCTGATGCCCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262059.8
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CCA 90 bp TTGAGCCCCCTCTGTGTCGGGGACCATGCTTTGGATACTGGGATAGGCAAACCACTCTGCCCACACACCTaGCCCTGGCGGTTCACATAT +
Preference number: 4 (lower is better)
Translates to: LSPLCVGDHALDTGIGKPLCPHT*PWRFTY
Trigger: ATATGTGAACCGCCAGGGCCAGGTGTGTGGGCAGAG...TGGTTTGCCTATCCCAGTATCCAAAGCATGGTCCCCGACACAGAGGGGGCTCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR CCA 90 bp AGGAGTGGACGATTCTATTCCCACAGGGGAAGGCCTCCTCCATCCCGGTTCCTCTCACCAGTTCATCCATaGGCCTTGGCTCTCGGAACT +
Preference number: 4 (lower is better)
Translates to: RSGRFYSHRGRPPPSRFLSPVHP*ALALGT
Trigger: AGTTCCGAGAGCCAAGGCCCATGGATGAACTGGTGA...GAGGAACCGGGATGGAGGAGGCCTTCCCCTGTGGGAATAGAATCGTCCACTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262059.8
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CCA 90 bp GGAGTGGACGATTCTATTCCCACAGGGGAAGGCCTCCTCCATCCCGGTTCCTCCTCATTCCGTTCTTGCTaGCTCTCATCGAGCTGGTTC +
Preference number: 4 (lower is better)
Translates to: GVDDSIPTGEGLLHPGSSSFRSC*LSSSWF
Trigger: GAACCAGCTCGATGAGAGCCAGCAAGAACGGAATGA...GGAGGAACCGGGATGGAGGAGGCCTTCCCCTGTGGGAATAGAATCGTCCACTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CCA 90 bp ACCCACTCATGGCCAGCACACCAGGAGGCACGACAGGACAGTAACTGCCCAGCAAGGGTGTCCTTCATCTaGGCCACCTTGTCTTTCAGT +
Preference number: 4 (lower is better)
Translates to: THSWPAHQEARQDSNCPARVSFI*ATLSFS
Trigger: ACTGAAAGACAAGGTGGCCCAGATGAAGGACACCCT...TGCTGGGCAGTTACTGTCCTGTCGTGCCTCCTGGTGTGCTGGCCATGAGTGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR CCA 90 bp ACTTGTCCCACTTTTCCATGGCATGCACCCACCCTGGGACTAAACCCTGAGCAGCCTCCCCAAGAAGGGTaGCTTTCTGCTGGCTTGAGG +
Preference number: 4 (lower is better)
Translates to: TCPTFPWHAPTLGLNPEQPPQEG*LSAGLR
Trigger: CCTCAAGCCAGCAGAAAGCCACCCTTCTTGGGGAGG...CTGCTCAGGGTTTAGTCCCAGGGTGGGTGCATGCCATGGAAAAGTGGGACAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR CCA 90 bp CTGAGAACCAAAAGGGACCTGAGAGGCCATGATGTCCATGCTGCTGCCTCTGTGCCTCCCCAAGAAGGGTaGCTTTCTGCTGGCTTGAGG +
Preference number: 4 (lower is better)
Translates to: LRTKRDLRGHDVHAAASVPPQEG*LSAGLR
Trigger: CCTCAAGCCAGCAGAAAGCCACCCTTCTTGGGGAGG...CACAGAGGCAGCAGCATGGACATCATGGCCTCTCAGGTCCCTTTTGGTTCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CCA 90 bp CTCCAAAACCACTTTCAGGGGATAAATTCAGCCACTGCTTCCGAACAGGACCCCCTATGGTGCGGTCCCTaGCTGCTGCTGCACTGGCCA +
Preference number: 4 (lower is better)
Translates to: LQNHFQGINSATASEQDPLWCGP*LLLHWP
Trigger: TGGCCAGTGCAGCAGCAGCCAGGGACCGCACCATAG...GGGGTCCTGTTCGGAAGCAGTGGCTGAATTTATCCCCTGAAAGTGGTTTTGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CCA 90 bp AAACTGAGAACCAAAAGGGACCTGAGAGGCCATGATGTCCATGCTGCTGCCTCTCTATGGTGCGGTCCCTaGCTGCTGCTGCACTGGCCA +
Preference number: 4 (lower is better)
Translates to: KLRTKRDLRGHDVHAAASLWCGP*LLLHWP
Trigger: TGGCCAGTGCAGCAGCAGCCAGGGACCGCACCATAG...AGAGGCAGCAGCATGGACATCATGGCCTCTCAGGTCCCTTTTGGTTCTCAGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CCA 90 bp AGGGTGCCCCAGGAATTGGCTTTGGGGCATCAGACAAGGGAGTGTGAGTGTGAGTGCTCCTTTTCCTTCTaGAGCACACGCAGGGCTGAC +
Preference number: 4 (lower is better)
Translates to: RVPQELALGHQTRECECECSFSF*STRRAD
Trigger: GTCAGCCCTGCGTGTGCTCCAGAAGGAAAAGGAGCA...CTCACACTCACACTCCCTTGTCTGATGCCCCAAAGCCAATTCCTGGGGCACCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CCA 90 bp AGGGTGCCCCAGGAATTGGCTTTGGGGCATCAGACAAGGGAGTGTGAGTGTGAGGAAATGGGAGCCGGCTaGCTGATGACAACAAGGGGA +
Preference number: 4 (lower is better)
Translates to: RVPQELALGHQTRECECEEMGAG*LMTTRG
Trigger: TCCCCTTGTTGTCATCAGCCAGCCGGCTCCCATTTC...CTCACACTCACACTCCCTTGTCTGATGCCCCAAAGCCAATTCCTGGGGCACCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000546443.5
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CCA 90 bp AGACTTCGGAGAGCAGGACCCATGTGCCTGGGTTCCCAGGTTATCCTGTGCCTAGAAATGGGAGCCGGCTaGCTGATGACAACAAGGGGA +
Preference number: 4 (lower is better)
Translates to: RLRRAGPMCLGSQVILCLEMGAG*LMTTRG
Trigger: TCCCCTTGTTGTCATCAGCCAGCCGGCTCCCATTTC...TAGGCACAGGATAACCTGGGAACCCAGGCACATGGGTCCTGCTCTCCGAAGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548263.5
CDS-3UTR CCA 90 bp ACGATTCTATTCCCACAGGGGAAGGCCTCCTCCATCCCGGTTCCTCCAAAACCAGCTACTGTCCTCAGCTaGCCCAGAGAGGTGAGGAGA +
Preference number: 4 (lower is better)
Translates to: TILFPQGKASSIPVPPKPATVLS*PREVRR
Trigger: TCTCCTCACCTCTCTGGGCCAGCTGAGGACAGTAGC...TGGTTTTGGAGGAACCGGGATGGAGGAGGCCTTCCCCTGTGGGAATAGAATCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000546443.5
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CCA 90 bp ACCAGGGCTAGGAGTGGACGATTCTATTCCCACAGGGGAAGGCCTCCTCCATCCAAGTGTCCATCCATGTaGTCCTCCAGGGCATCCTTG +
Preference number: 4 (lower is better)
Translates to: TRARSGRFYSHRGRPPPSKCPSM*SSRASL
Trigger: CAAGGATGCCCTGGAGGACCACATGGATGGACACTT...GGATGGAGGAGGCCTTCCCCTGTGGGAATAGAATCGTCCACTCCTAGCCCTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000546443.5
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CCA 90 bp AGGGTGCCCCAGGAATTGGCTTTGGGGCATCAGACAAGGGAGTGTGAGTGTGAGGGGTGCCCCAGGAATTaGCTTTGGGGCATCAGACAA +
Preference number: 4 (lower is better)
Translates to: RVPQELALGHQTRECECEGCPRN*LWGIRQ
Trigger: TTGTCTGATGCCCCAAAGCCAATTCCTGGGGCACCC...CTCACACTCACACTCCCTTGTCTGATGCCCCAAAGCCAATTCCTGGGGCACCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 5 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000546443.5
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CCA 90 bp TTGAGCCCCCTCTGTGTCGGGGACCATGCTTTGGATACTGGGATAGGCAAACCACCAGGGTCTAAGAGCTaGAGGTCTGGGCCCTGTGTT +
Preference number: 4 (lower is better)
Translates to: LSPLCVGDHALDTGIGKPPGSKS*RSGPCV
Trigger: AACACAGGGCCCAGACCTCCAGCTCTTAGACCCTGG...TGGTTTGCCTATCCCAGTATCCAAAGCATGGTCCCCGACACAGAGGGGGCTCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR CCA 90 bp ACGATTCTATTCCCACAGGGGAAGGCCTCCTCCATCCCGGTTCCTCCAAAACCAGAGACAACCCACTCATaGCCAGCACACCAGGAGGCA +
Preference number: 4 (lower is better)
Translates to: TILFPQGKASSIPVPPKPETTHS*PAHQEA
Trigger: TGCCTCCTGGTGTGCTGGCCATGAGTGGGTTGTCTC...TGGTTTTGGAGGAACCGGGATGGAGGAGGCCTTCCCCTGTGGGAATAGAATCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR CCA 90 bp AGGGTGCCCCAGGAATTGGCTTTGGGGCATCAGACAAGGGAGTGTGAGTGTGAGAAGAAGTCATCCAGGTaGGGCTGGAAAGGGGGTGGA +
Preference number: 4 (lower is better)
Translates to: RVPQELALGHQTRECECEKKSSR*GWKGGG
Trigger: TCCACCCCCTTTCCAGCCCCACCTGGATGACTTCTT...CTCACACTCACACTCCCTTGTCTGATGCCCCAAAGCCAATTCCTGGGGCACCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR CCA 90 bp GCCATGTGGCTCCTGTGGGTGTATGTGCGGCTTGGCAGGGGCTGTGGCATGGGAAAATGCACCTCCTGCTaGGGATGTTGGCTCATAATT +
Preference number: 4 (lower is better)
Translates to: AMWLLWVYVRLGRGCGMGKCTSC*GCWLII
Trigger: AATTATGAGCCAACATCCCCAGCAGGAGGTGCATTT...TCCCATGCCACAGCCCCTGCCAAGCCGCACATACACCCACAGGAGCCACATGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR CCA 90 bp AGTGGGGGAGTGGTGTGTTTGGATTCGTTCTTTCACCACCAAATACTGACGCGAGAAGCTGGCTGCCCCTaGGTTTCCCCCAGCCCATGC +
Preference number: 4 (lower is better)
Translates to: SGGVVCLDSFFHHQILTREAGCP*VSPSPC
Trigger: GCATGGGCTGGGGGAAACCCAGGGGCAGCCAGCTTC...TCGCGTCAGTATTTGGTGGTGAAAGAACGAATCCAAACACACCACTCCCCCACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR CCA 90 bp CCAGACTCCCACTTGAGACAACCCACTCATGGCCAGCACACCAGGAGGCACGACGGGGAGTGGTGTGTTTaGATTCGTTCTTTCACCACC +
Preference number: 4 (lower is better)
Translates to: PDSHLRQPTHGQHTRRHDGEWCV*IRSFTT
Trigger: GGTGGTGAAAGAACGAATCCAAACACACCACTCCCC...GTCGTGCCTCCTGGTGTGCTGGCCATGAGTGGGTTGTCTCAAGTGGGAGTCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR CCA 90 bp GGAGTGGACGATTCTATTCCCACAGGGGAAGGCCTCCTCCATCCCGGTTCCTCCCTGGTTGAACTCACCTaGCCATGTCATAGAAGGCAC +
Preference number: 4 (lower is better)
Translates to: GVDDSIPTGEGLLHPGSSLVELT*PCHRRH
Trigger: GTGCCTTCTATGACATGGCCAGGTGAGTTCAACCAG...GGAGGAACCGGGATGGAGGAGGCCTTCCCCTGTGGGAATAGAATCGTCCACTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548263.5
CDS-3UTR CCA 90 bp AGGAGTGGACGATTCTATTCCCACAGGGGAAGGCCTCCTCCATCCCGGTTCCTCGGAAGCAGGGCAATTTaGGCTCTGCAGAAGATGGTG +
Preference number: 4 (lower is better)
Translates to: RSGRFYSHRGRPPPSRFLGSRAI*ALQKMV
Trigger: CACCATCTTCTGCAGAGCCCAAATTGCCCTGCTTCC...GAGGAACCGGGATGGAGGAGGCCTTCCCCTGTGGGAATAGAATCGTCCACTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546443.5
ENST00000548263.5
CDS-3UTR CCA 90 bp CATGTGCCTGGGTTCCCAGGTTATCCTGTGCCTAATGCAGCATCCTGGCCTCTCCAGGACCCATGTGCCTaGGTTCCCAGGTTATCCTGT +
Preference number: 4 (lower is better)
Translates to: HVPGFPGYPVPNAASWPLQDPCA*VPRLSC
Trigger: ACAGGATAACCTGGGAACCCAGGCACATGGGTCCTG...GAGAGGCCAGGATGCTGCATTAGGCACAGGATAACCTGGGAACCCAGGCACATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548263.5
CDS-3UTR TCA 90 bp TTGAGCCCCCTCTGTGTCGGGGACCATGCTTTGGATACTGGGATAGGCAAACCAAGGCAGCCTCCACCTTaGAGATGCCAATCCAGTCAC +
Preference number: 4 (lower is better)
Translates to: LSPLCVGDHALDTGIGKPRQPPP*RCQSSH
Trigger: GTGACTGGATTGGCATCTTCAAGGTGGAGGCTGCCT...TGGTTTGCCTATCCCAGTATCCAAAGCATGGTCCCCGACACAGAGGGGGCTCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR TCA 90 bp AGGAATTGGCTTTGGGGCATCAGACAAGGGAGTGTGAGTGTGAGTGTGTGTGTGTGTCCCTCTCTTCTGTaGTCTCCCCATGGGACCGGG +
Preference number: 4 (lower is better)
Translates to: RNWLWGIRQGSVSVSVCVCPSLL*SPHGTG
Trigger: CCCGGTCCCATGGGGAGATCACAGAAGAGAGGGACA...CACACACACACTCACACTCACACTCCCTTGTCTGATGCCCCAAAGCCAATTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR TCA 90 bp CTCCAAAACCACTTTCAGGGGATAAATTCAGCCACTGCTTCCGAACAGGACCCCTGTCCCTCTCTTCTGTaGTCTCCCCATGGGACCGGG +
Preference number: 4 (lower is better)
Translates to: LQNHFQGINSATASEQDPCPSLL*SPHGTG
Trigger: CCCGGTCCCATGGGGAGATCACAGAAGAGAGGGACA...GGGGTCCTGTTCGGAAGCAGTGGCTGAATTTATCCCCTGAAAGTGGTTTTGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR TCA 90 bp ACCAGGGCTAGGAGTGGACGATTCTATTCCCACAGGGGAAGGCCTCCTCCATCCCTCCCGCTTACTTTCTaGCAACTGTACCAGGCTAGA +
Preference number: 4 (lower is better)
Translates to: TRARSGRFYSHRGRPPPSLPLTF*QLYQAR
Trigger: TCTAGCCTGGTACAGTTGTCAGAAAGTAAGCGGGAG...GGATGGAGGAGGCCTTCCCCTGTGGGAATAGAATCGTCCACTCCTAGCCCTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR TCA 90 bp ATCCCGGTTCCTCCAAAACCACTTTCAGGGGATAAATTCAGCCACTGCTTCCGATGGGGACTCGTCCTCTaGGTCTGTCAGAGCTGCCGG +
Preference number: 4 (lower is better)
Translates to: IPVPPKPLSGDKFSHCFRWGLVL*VCQSCR
Trigger: CCGGCAGCTCTGACAGACTCAGAGGACGAGTCCCCA...TCGGAAGCAGTGGCTGAATTTATCCCCTGAAAGTGGTTTTGGAGGAACCGGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000546443.5
ENST00000548263.5
ENST00000550804.6
CDS-3UTR TCA 90 bp AAAACTCAGGTAAACCAACGGAAACTCCAAATAAGAGAGGGTAGGGTGCCCCAGGCTGGCCCAGAGAGGTaGGGAGAAATGGGAGCCGGC +
Preference number: 4 (lower is better)
Translates to: KTQVNQRKLQIREGRVPQAGPER*GEMGAG
Trigger: GCCGGCTCCCATTTCTCCTCACCTCTCTGGGCCAGC...CTGGGGCACCCTACCCTCTCTTATTTGGAGTTTCCGTTGGTTTACCTGAGTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000546443.5
ENST00000548263.5
ENST00000550804.6
CDS-3UTR TCA 90 bp ATAAATTCAGCCACTGCTTCCGAACAGGACCCCTCCCTGGGACAAAAGAGCCAGAGCCAGACTCCCACTTaGGACAACCCACTCATGGCC +
Preference number: 4 (lower is better)
Translates to: INSATASEQDPSLGQKSQSQTPT*DNPLMA
Trigger: GGCCATGAGTGGGTTGTCTCAAGTGGGAGTCTGGCT...CTGGCTCTTTTGTCCCAGGGAGGGGTCCTGTTCGGAAGCAGTGGCTGAATTTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR TCA 90 bp GAGCCCCCTCTGTGTCGGGGACCATGCTTTGGATACTGGGATAGGCAAACCATGAACCCTGAGCAGAAGTaGCAGGGACCCATGAGTTTG +
Preference number: 4 (lower is better)
Translates to: EPPLCRGPCFGYWDRQTMNPEQK*QGPMSL
Trigger: CAAACTCATGGGTCCCTGTCACTTCTGCTCAGGGTT...CATGGTTTGCCTATCCCAGTATCCAAAGCATGGTCCCCGACACAGAGGGGGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR TCA 90 bp TCAGAAGCAACCAGGGCTAGGAGTGGACGATTCTATTCCCACAGGGGAAGGCCTTGGAGGAGGGGAGTATaGAGCAGATTCGGGACAGTG +
Preference number: 4 (lower is better)
Translates to: SEATRARSGRFYSHRGRPWRRGV*SRFGTV
Trigger: CACTGTCCCGAATCTGCTTCATACTCCCCTCCTCCA...AGGCCTTCCCCTGTGGGAATAGAATCGTCCACTCCTAGCCCTGGTTGCTTCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR TCA 90 bp ACCCACTCATGGCCAGCACACCAGGAGGCACGACAGGACAGTAACTGCCCAGCAGGGATAGGCAAACCATaGGTAAGGAAGAGAAATGGC +
Preference number: 4 (lower is better)
Translates to: THSWPAHQEARQDSNCPAGIGKP*VRKRNG
Trigger: GCCATTTCTCTTCCTTACTCATGGTTTGCCTATCCC...TGCTGGGCAGTTACTGTCCTGTCGTGCCTCCTGGTGTGCTGGCCATGAGTGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR GCA 90 bp AGGGTGCCCCAGGAATTGGCTTTGGGGCATCAGACAAGGGAGTGTGAGTGTGAGAGGTCATTCCGTTCTTaGTGGCTCTCATCGAGCTGG +
Preference number: 4 (lower is better)
Translates to: RVPQELALGHQTRECECERSFRS*WLSSSW
Trigger: CCAGCTCGATGAGAGCCAGCAAGAACGGAATGACCT...CTCACACTCACACTCCCTTGTCTGATGCCCCAAAGCCAATTCCTGGGGCACCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR GCA 90 bp TCCATCCCGGTTCCTCCAAAACCACTTTCAGGGGATAAATTCAGCCACTGCTTCTGGGCCCCTCGAAGCTaGTCCTTCAAGGGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: SIPVPPKPLSGDKFSHCFWAPRS*SFKGSS
Trigger: GCTGGAGCCCTTGAAGGAGCAGCTTCGAGGGGCCCA...GAAGCAGTGGCTGAATTTATCCCCTGAAAGTGGTTTTGGAGGAACCGGGATGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR GCA 90 bp ATCCCGGTTCCTCCAAAACCACTTTCAGGGGATAAATTCAGCCACTGCTTCCGATGGGCCCCTCGAAGCTaGTCCTTCAAGGGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: IPVPPKPLSGDKFSHCFRWAPRS*SFKGSS
Trigger: GCTGGAGCCCTTGAAGGAGCAGCTTCGAGGGGCCCA...TCGGAAGCAGTGGCTGAATTTATCCCCTGAAAGTGGTTTTGGAGGAACCGGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR GCA 90 bp GGAGTGGACGATTCTATTCCCACAGGGGAAGGCCTCCTCCATCCCGGTTCCTCCTTTTCTTCCTTCAAGTaGAAACCGAGCTCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: GVDDSIPTGEGLLHPGSSFSSFK*KPSSAS
Trigger: GCTGGCTGAGCTCGGTTTGCACTTGAAGGAAGAAAA...GGAGGAACCGGGATGGAGGAGGCCTTCCCCTGTGGGAATAGAATCGTCCACTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR GCA 90 bp GCCATGTGGCTCCTGTGGGTGTATGTGCGGCTTGGCAGGGGCTGTGGCATGGGACAATCGAAGTATCTCTaGACTCAGCTTCAGGATCTT +
Preference number: 4 (lower is better)
Translates to: AMWLLWVYVRLGRGCGMGQSKYL*TQLQDL
Trigger: AAGATCCTGAAGCTGAGTGCAGAGATACTTCGATTG...TCCCATGCCACAGCCCCTGCCAAGCCGCACATACACCCACAGGAGCCACATGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR GCA 90 bp CCAGACTCCCACTTGAGACAACCCACTCATGGCCAGCACACCAGGAGGCACGACCCTCTCCTCCTGAACTaGCTTCTCCAATCGAAGTAT +
Preference number: 4 (lower is better)
Translates to: PDSHLRQPTHGQHTRRHDPLLLN*LLQSKY
Trigger: ATACTTCGATTGGAGAAGGCAGTTCAGGAGGAGAGG...GTCGTGCCTCCTGGTGTGCTGGCCATGAGTGGGTTGTCTCAAGTGGGAGTCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR GCA 90 bp TTGAGCCCCCTCTGTGTCGGGGACCATGCTTTGGATACTGGGATAGGCAAACCAATTCCACTTCTCATCTaGCACCTTCTCCAGGCGGGC +
Preference number: 4 (lower is better)
Translates to: LSPLCVGDHALDTGIGKPIPLLI*HLLQAG
Trigger: GCCCGCCTGGAGAAGGTGGCAGATGAGAAGTGGAAT...TGGTTTGCCTATCCCAGTATCCAAAGCATGGTCCCCGACACAGAGGGGGCTCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR GCA 90 bp AGGAATTGGCTTTGGGGCATCAGACAAGGGAGTGTGAGTGTGAGTGTGTGTGTGTGGCAGGGCCCCCAGTaGTGGTTTCTGACAGGGTAC +
Preference number: 4 (lower is better)
Translates to: RNWLWGIRQGSVSVSVCVWQGPQ*WFLTGY
Trigger: GTACCCTGTCAGAAACCAGCACTGGGGGCCCTGCCA...CACACACACACTCACACTCACACTCCCTTGTCTGATGCCCCAAAGCCAATTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000546443.5
ENST00000548263.5
ENST00000550804.6
CDS-3UTR GCA 90 bp CTGAGAACCAAAAGGGACCTGAGAGGCCATGATGTCCATGCTGCTGCCTCTGTGTGCTCCCTCCCCAACTaGCGCATTATCCAAGCCAGA +
Preference number: 4 (lower is better)
Translates to: LRTKRDLRGHDVHAAASVCSLPN*RIIQAR
Trigger: TCTGGCTTGGATAATGCGGCAGTTGGGGAGGGAGCA...CACAGAGGCAGCAGCATGGACATCATGGCCTCTCAGGTCCCTTTTGGTTCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR GCA 90 bp TTGGGGCATCAGACAAGGGAGTGTGAGTGTGAGTGTGTGTGTGCAGTGGCTGTGGTAGGCATGTGCTTGTaGAGGCCATTGCTGAGAGCC +
Preference number: 4 (lower is better)
Translates to: LGHQTRECECECVCAVAVVGMCL*RPLLRA
Trigger: GGCTCTCAGCAATGGCCTGCACAAGCACATGCCTAC...CACAGCCACTGCACACACACACTCACACTCACACTCCCTTGTCTGATGCCCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR GCA 90 bp GCCCATTCAGATCTATCGGCTTTTGCATGGATGCTGGGGAGCAGGGAGGAAAGGGGGGTTGTAGGCATGTaGTTGTGCAGGCCATTGCTG +
Preference number: 4 (lower is better)
Translates to: AHSDLSAFAWMLGSREERGVVGM*LCRPLL
Trigger: CAGCAATGGCCTGCACAAGCACATGCCTACAACCCC...CCTTTCCTCCCTGCTCCCCAGCATCCATGCAAAAGCCGATAGATCTGAATGGGC
56% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR GCA 90 bp ATGAAACTGAGAACCAAAAGGGACCTGAGAGGCCATGATGTCCATGCTGCTGCCTCCTGTGGGTGTATGTaGGGCTTGGCAGGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: MKLRTKRDLRGHDVHAAASCGCM*GLAGAV
Trigger: CACAGCCCCTGCCAAGCCGCACATACACCCACAGGA...GGCAGCAGCATGGACATCATGGCCTCTCAGGTCCCTTTTGGTTCTCAGTTTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR GCA 90 bp CTCCAAAACCACTTTCAGGGGATAAATTCAGCCACTGCTTCCGAACAGGACCCCGAATTGGAAGCTGGCTaGCCCTGGGTTTCCCCCAGC +
Preference number: 4 (lower is better)
Translates to: LQNHFQGINSATASEQDPELEAG*PWVSPS
Trigger: GCTGGGGGAAACCCAGGGGCAGCCAGCTTCCAATTC...GGGGTCCTGTTCGGAAGCAGTGGCTGAATTTATCCCCTGAAAGTGGTTTTGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR GCA 90 bp TTGAGCCCCCTCTGTGTCGGGGACCATGCTTTGGATACTGGGATAGGCAAACCACGGCTTTTGCATGGATaGTGGGGAGCAGGGAGGAAA +
Preference number: 4 (lower is better)
Translates to: LSPLCVGDHALDTGIGKPRLLHG*WGAGRK
Trigger: TTTCCTCCCTGCTCCCCAGCATCCATGCAAAAGCCG...TGGTTTGCCTATCCCAGTATCCAAAGCATGGTCCCCGACACAGAGGGGGCTCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR GCA 90 bp ACGATTCTATTCCCACAGGGGAAGGCCTCCTCCATCCCGGTTCCTCCAAAACCATCTCTTCCCTGTGCCTaGCCCCTTGAACCTGGGAAT +
Preference number: 4 (lower is better)
Translates to: TILFPQGKASSIPVPPKPSLPCA*PLEPGN
Trigger: ATTCCCAGGTTCAAGGGGGCAGGCACAGGGAAGAGA...TGGTTTTGGAGGAACCGGGATGGAGGAGGCCTTCCCCTGTGGGAATAGAATCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000548263.5
CDS-3UTR GCA 90 bp AAACTGAGAACCAAAAGGGACCTGAGAGGCCATGATGTCCATGCTGCTGCCTCTGCATCACCCCCTCCCTaGCCTGAGCCCATCTCACAT +
Preference number: 4 (lower is better)
Translates to: KLRTKRDLRGHDVHAAASASPPP*PEPISH
Trigger: ATGTGAGATGGGCTCAGGGCAGGGAGGGGGTGATGC...AGAGGCAGCAGCATGGACATCATGGCCTCTCAGGTCCCTTTTGGTTCTCAGTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000548263.5
CDS-3UTR GCA 90 bp AGGGTGCCCCAGGAATTGGCTTTGGGGCATCAGACAAGGGAGTGTGAGTGTGAGTCCCAGGTTATCCTGTaGCTAATGCAGCATCCTGGC +
Preference number: 4 (lower is better)
Translates to: RVPQELALGHQTRECECESQVIL*LMQHPG
Trigger: GCCAGGATGCTGCATTAGGCACAGGATAACCTGGGA...CTCACACTCACACTCCCTTGTCTGATGCCCCAAAGCCAATTCCTGGGGCACCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548263.5
CDS-3UTR CCA 90 bp AGGGTGCCCCAGGAATTGGCTTTGGGGCATCAGACAAGGGAGTGTGAGTGTGAGGGCTTCTGGGGTTTGTaGTTCTTCTGCGCCCTTTTG +
Preference number: 4 (lower is better)
Translates to: RVPQELALGHQTRECECEGFWGL*FFCALL
Trigger: CAAAAGGGCGCAGAAGAACCACAAACCCCAGAAGCC...CTCACACTCACACTCCCTTGTCTGATGCCCCAAAGCCAATTCCTGGGGCACCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000262059.8
CDS-3UTR CCA 90 bp TGTGTATCAGAAGCAACCAGGGCTAGGAGTGGACGATTCTATTCCCACAGGGGAGGGCGCGAGGGCTTCTaGGGTTTGTGGTTCTTCTGC +
Preference number: 4 (lower is better)
Translates to: CVSEATRARSGRFYSHRGGREGF*GLWFFC
Trigger: GCAGAAGAACCACAAACCCCAGAAGCCCTCGCGCCC...TCCCCTGTGGGAATAGAATCGTCCACTCCTAGCCCTGGTTGCTTCTGATACACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262059.8
CDS-3UTR CCA 90 bp ATAAATTCAGCCACTGCTTCCGAACAGGACCCCTCCCTGGGACAAAAGAGCCAGCAGCACTCCGACTTCTaGAGGGGAGGGAGAAGAGTG +
Preference number: 4 (lower is better)
Translates to: INSATASEQDPSLGQKSQQHSDF*RGGRRV
Trigger: CACTCTTCTCCCTCCCCTCCAGAAGTCGGAGTGCTG...CTGGCTCTTTTGTCCCAGGGAGGGGTCCTGTTCGGAAGCAGTGGCTGAATTTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262059.8
CDS-3UTR CCA 90 bp GTATCAGAAGCAACCAGGGCTAGGAGTGGACGATTCTATTCCCACAGGGGAAGGTGCCAATCCAGTCACTaGCACTGGGCATGGTGCCTG +
Preference number: 4 (lower is better)
Translates to: VSEATRARSGRFYSHRGRCQSSH*HWAWCL
Trigger: CAGGCACCATGCCCAGTGCCAGTGACTGGATTGGCA...CCTTCCCCTGTGGGAATAGAATCGTCCACTCCTAGCCCTGGTTGCTTCTGATAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CCA 90 bp GAGCCCCCTCTGTGTCGGGGACCATGCTTTGGATACTGGGATAGGCAAACCATGTTCATCCATGGGCCTTaGCTCTCGGAACTGGAAAGG +
Preference number: 4 (lower is better)
Translates to: EPPLCRGPCFGYWDRQTMFIHGP*LSELER
Trigger: CCTTTCCAGTTCCGAGAGCCAAGGCCCATGGATGAA...CATGGTTTGCCTATCCCAGTATCCAAAGCATGGTCCCCGACACAGAGGGGGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR CCA 90 bp AGACTTCGGAGAGCAGGACCCATGTGCCTGGGTTCCCAGGTTATCCTGTGCCTATTCATCCATGGGCCTTaGCTCTCGGAACTGGAAAGG +
Preference number: 4 (lower is better)
Translates to: RLRRAGPMCLGSQVILCLFIHGP*LSELER
Trigger: CCTTTCCAGTTCCGAGAGCCAAGGCCCATGGATGAA...TAGGCACAGGATAACCTGGGAACCCAGGCACATGGGTCCTGCTCTCCGAAGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548263.5
CDS-3UTR CCA 90 bp AGAGAGGGTAGGGTGCCCCAGGAATTGGCTTTGGGGCATCAGACAAGGGAGTGTTCACCAGTTCATCCATaGGCCTTGGCTCTCGGAACT +
Preference number: 4 (lower is better)
Translates to: REGRVPQELALGHQTRECSPVHP*ALALGT
Trigger: AGTTCCGAGAGCCAAGGCCCATGGATGAACTGGTGA...ACACTCCCTTGTCTGATGCCCCAAAGCCAATTCCTGGGGCACCCTACCCTCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262059.8
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CCA 90 bp ACCAGGGCTAGGAGTGGACGATTCTATTCCCACAGGGGAAGGCCTCCTCCATCCTGGCTCTCATCGAGCTaGTTCTGTAACACAGTTGCC +
Preference number: 4 (lower is better)
Translates to: TRARSGRFYSHRGRPPPSWLSSS*FCNTVA
Trigger: GGCAACTGTGTTACAGAACCAGCTCGATGAGAGCCA...GGATGGAGGAGGCCTTCCCCTGTGGGAATAGAATCGTCCACTCCTAGCCCTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CCA 90 bp GCCCATTCAGATCTATCGGCTTTTGCATGGATGCTGGGGAGCAGGGAGGAAAGGTCTGTGATCTCCCCATaGGACCGGGAAATCCCCTTG +
Preference number: 4 (lower is better)
Translates to: AHSDLSAFAWMLGSREERSVISP*DREIPL
Trigger: CAAGGGGATTTCCCGGTCCCATGGGGAGATCACAGA...CCTTTCCTCCCTGCTCCCCAGCATCCATGCAAAAGCCGATAGATCTGAATGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR CCA 90 bp TGTGTATCAGAAGCAACCAGGGCTAGGAGTGGACGATTCTATTCCCACAGGGGAAGGATGCGTGCCACATaGTCTCCCTGTTGCCGGCTC +
Preference number: 4 (lower is better)
Translates to: CVSEATRARSGRFYSHRGRMRAT*SPCCRL
Trigger: GAGCCGGCAACAGGGAGACCATGTGGCACGCATCCT...TCCCCTGTGGGAATAGAATCGTCCACTCCTAGCCCTGGTTGCTTCTGATACACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CCA 90 bp GTATCAGAAGCAACCAGGGCTAGGAGTGGACGATTCTATTCCCACAGGGGAAGGCCTCCCCAAGAAGGGTaGCTTTCTGCTGGCTTGAGG +
Preference number: 4 (lower is better)
Translates to: VSEATRARSGRFYSHRGRPPQEG*LSAGLR
Trigger: CCTCAAGCCAGCAGAAAGCCACCCTTCTTGGGGAGG...CCTTCCCCTGTGGGAATAGAATCGTCCACTCCTAGCCCTGGTTGCTTCTGATAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CCA 90 bp ATCCCGGTTCCTCCAAAACCACTTTCAGGGGATAAATTCAGCCACTGCTTCCGACTATGGTGCGGTCCCTaGCTGCTGCTGCACTGGCCA +
Preference number: 4 (lower is better)
Translates to: IPVPPKPLSGDKFSHCFRLWCGP*LLLHWP
Trigger: TGGCCAGTGCAGCAGCAGCCAGGGACCGCACCATAG...TCGGAAGCAGTGGCTGAATTTATCCCCTGAAAGTGGTTTTGGAGGAACCGGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CCA 90 bp AAACTGAGAACCAAAAGGGACCTGAGAGGCCATGATGTCCATGCTGCTGCCTCTGGTGTAGTTCGGCTATaGTGCGGTCCCTGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: KLRTKRDLRGHDVHAAASGVVRL*CGPWLL
Trigger: CAGCAGCCAGGGACCGCACCATAGCCGAACTACACC...AGAGGCAGCAGCATGGACATCATGGCCTCTCAGGTCCCTTTTGGTTCTCAGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CCA 90 bp AGGAATTGGCTTTGGGGCATCAGACAAGGGAGTGTGAGTGTGAGTGTGTGTGTGGGTGTAGTTCGGCTATaGTGCGGTCCCTGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: RNWLWGIRQGSVSVSVCVGVVRL*CGPWLL
Trigger: CAGCAGCCAGGGACCGCACCATAGCCGAACTACACC...CACACACACACTCACACTCACACTCCCTTGTCTGATGCCCCAAAGCCAATTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CCA 90 bp CGATTCTATTCCCACAGGGGAAGGCCTCCTCCATCCCGGTTCCTCCAAAACCACCCTCCTCATCCTCTGTaGTGGCATCCTCATTCCACT +
Preference number: 4 (lower is better)
Translates to: RFYSHRGRPPPSRFLQNHPPHPL*WHPHST
Trigger: AGTGGAATGAGGATGCCACCACAGAGGATGAGGAGG...GTGGTTTTGGAGGAACCGGGATGGAGGAGGCCTTCCCCTGTGGGAATAGAATCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000546443.5
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CCA 90 bp CAGAAGCAACCAGGGCTAGGAGTGGACGATTCTATTCCCACAGGGGAAGGCCTCCCTCCTCATCCTCTGTaGTGGCATCCTCATTCCACT +
Preference number: 4 (lower is better)
Translates to: QKQPGLGVDDSIPTGEGLPPHPL*WHPHST
Trigger: AGTGGAATGAGGATGCCACCACAGAGGATGAGGAGG...GAGGCCTTCCCCTGTGGGAATAGAATCGTCCACTCCTAGCCCTGGTTGCTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000546443.5
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CCA 90 bp CATGTGCCTGGGTTCCCAGGTTATCCTGTGCCTAATGCAGCATCCTGGCCTCTCACAAAGGCCATAGGGTaGGAGCCTCATGTCTTCTGG +
Preference number: 4 (lower is better)
Translates to: HVPGFPGYPVPNAASWPLTKAIG*EPHVFW
Trigger: CCAGAAGACATGAGGCTCCCACCCTATGGCCTTTGT...GAGAGGCCAGGATGCTGCATTAGGCACAGGATAACCTGGGAACCCAGGCACATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548263.5
CDS-3UTR CCA 90 bp TTGAGCCCCCTCTGTGTCGGGGACCATGCTTTGGATACTGGGATAGGCAAACCAGAAATGGGAGCCGGCTaGCTGATGACAACAAGGGGA +
Preference number: 4 (lower is better)
Translates to: LSPLCVGDHALDTGIGKPEMGAG*LMTTRG
Trigger: TCCCCTTGTTGTCATCAGCCAGCCGGCTCCCATTTC...TGGTTTGCCTATCCCAGTATCCAAAGCATGGTCCCCGACACAGAGGGGGCTCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR CCA 90 bp TGCAGTGGCTGTGTATCAGAAGCAACCAGGGCTAGGAGTGGACGATTCTATTCCCAGGGCCCCCAGTGCTaGTTTCTGACAGGGTACCCA +
Preference number: 4 (lower is better)
Translates to: CSGCVSEATRARSGRFYSQGPQC*FLTGYP
Trigger: TGGGTACCCTGTCAGAAACCAGCACTGGGGGCCCTG...GGAATAGAATCGTCCACTCCTAGCCCTGGTTGCTTCTGATACACAGCCACTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000546443.5
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CCA 90 bp CGATTCTATTCCCACAGGGGAAGGCCTCCTCCATCCCGGTTCCTCCAAAACCACAAGTGTCCATCCATGTaGTCCTCCAGGGCATCCTTG +
Preference number: 4 (lower is better)
Translates to: RFYSHRGRPPPSRFLQNHKCPSM*SSRASL
Trigger: CAAGGATGCCCTGGAGGACCACATGGATGGACACTT...GTGGTTTTGGAGGAACCGGGATGGAGGAGGCCTTCCCCTGTGGGAATAGAATCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000546443.5
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CCA 90 bp AGACTTCGGAGAGCAGGACCCATGTGCCTGGGTTCCCAGGTTATCCTGTGCCTACCCAGGAATTGGCTTTaGGGCATCAGACAAGGGAGT +
Preference number: 4 (lower is better)
Translates to: RLRRAGPMCLGSQVILCLPRNWL*GIRQGS
Trigger: ACTCCCTTGTCTGATGCCCCAAAGCCAATTCCTGGG...TAGGCACAGGATAACCTGGGAACCCAGGCACATGGGTCCTGCTCTCCGAAGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548263.5
CDS-3UTR CCA 90 bp CGATTCTATTCCCACAGGGGAAGGCCTCCTCCATCCCGGTTCCTCCAAAACCACTGGAAAAGGCTAGGGTaGGGCACAGAAGTCAATGGG +
Preference number: 4 (lower is better)
Translates to: RFYSHRGRPPPSRFLQNHWKRLG*GTEVNG
Trigger: CCCATTGACTTCTGTGCCCCACCCTAGCCTTTTCCA...GTGGTTTTGGAGGAACCGGGATGGAGGAGGCCTTCCCCTGTGGGAATAGAATCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000546443.5
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CCA 90 bp CAGAAGCAACCAGGGCTAGGAGTGGACGATTCTATTCCCACAGGGGAAGGCCTCAAGCTTTTATTGCTGTaGGGGGACCTGGAGAGGGAG +
Preference number: 4 (lower is better)
Translates to: QKQPGLGVDDSIPTGEGLKLLLL*GDLERE
Trigger: CTCCCTCTCCAGGTCCCCCCACAGCAATAAAAGCTT...GAGGCCTTCCCCTGTGGGAATAGAATCGTCCACTCCTAGCCCTGGTTGCTTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000546443.5
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CCA 90 bp GGTACAGTGATGGCTGCTATGAAGGGTGAAGTTCTCGGCAGTGGGAAACTTGTCGGAGAAAGGGAATGGTaGGGGTGGTCCACACAGGGG +
Preference number: 4 (lower is better)
Translates to: GTVMAAMKGEVLGSGKLVGEREW*GWSTQG
Trigger: CCCCTGTGTGGACCACCCCCACCATTCCCTTTCTCC...GACAAGTTTCCCACTGCCGAGAACTTCACCCTTCATAGCAGCCATCACTGTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR CCA 90 bp ACTTGTCCCACTTTTCCATGGCATGCACCCACCCTGGGACTAAACCCTGAGCAGAAGAAGTCATCCAGGTaGGGCTGGAAAGGGGGTGGA +
Preference number: 4 (lower is better)
Translates to: TCPTFPWHAPTLGLNPEQKKSSR*GWKGGG
Trigger: TCCACCCCCTTTCCAGCCCCACCTGGATGACTTCTT...CTGCTCAGGGTTTAGTCCCAGGGTGGGTGCATGCCATGGAAAAGTGGGACAAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR CCA 90 bp GAGCCCCCTCTGTGTCGGGGACCATGCTTTGGATACTGGGATAGGCAAACCATGATGGGAGCAGGGGCCTaGGTTCCTGTTTGTCTACTA +
Preference number: 4 (lower is better)
Translates to: EPPLCRGPCFGYWDRQTMMGAGA*VPVCLL
Trigger: TAGTAGACAAACAGGAACCCAGGCCCCTGCTCCCAT...CATGGTTTGCCTATCCCAGTATCCAAAGCATGGTCCCCGACACAGAGGGGGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR CCA 90 bp CTGAGAACCAAAAGGGACCTGAGAGGCCATGATGTCCATGCTGCTGCCTCTGTGGTGCAGCTAGCCATGTaGCTCCTGTGGGTGTATGTG +
Preference number: 4 (lower is better)
Translates to: LRTKRDLRGHDVHAAASVVQLAM*LLWVYV
Trigger: CACATACACCCACAGGAGCCACATGGCTAGCTGCAC...CACAGAGGCAGCAGCATGGACATCATGGCCTCTCAGGTCCCTTTTGGTTCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR CCA 90 bp ACGATTCTATTCCCACAGGGGAAGGCCTCCTCCATCCCGGTTCCTCCAAAACCAGTGCAGCTAGCCATGTaGCTCCTGTGGGTGTATGTG +
Preference number: 4 (lower is better)
Translates to: TILFPQGKASSIPVPPKPVQLAM*LLWVYV
Trigger: CACATACACCCACAGGAGCCACATGGCTAGCTGCAC...TGGTTTTGGAGGAACCGGGATGGAGGAGGCCTTCCCCTGTGGGAATAGAATCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR CCA 90 bp TTGAGCCCCCTCTGTGTCGGGGACCATGCTTTGGATACTGGGATAGGCAAACCAACTAGAATTGGAAGCTaGCTGCCCCTGGGTTTCCCC +
Preference number: 4 (lower is better)
Translates to: LSPLCVGDHALDTGIGKPTRIGS*LPLGFP
Trigger: GGGGAAACCCAGGGGCAGCCAGCTTCCAATTCTAGT...TGGTTTGCCTATCCCAGTATCCAAAGCATGGTCCCCGACACAGAGGGGGCTCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR CCA 90 bp ACGATTCTATTCCCACAGGGGAAGGCCTCCTCCATCCCGGTTCCTCCAAAACCACTATCGGCTTTTGCATaGATGCTGGGGAGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: TILFPQGKASSIPVPPKPLSAFA*MLGSRE
Trigger: CTCCCTGCTCCCCAGCATCCATGCAAAAGCCGATAG...TGGTTTTGGAGGAACCGGGATGGAGGAGGCCTTCCCCTGTGGGAATAGAATCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR CCA 90 bp CTGAGAACCAAAAGGGACCTGAGAGGCCATGATGTCCATGCTGCTGCCTCTGTGCCTAATGCAGCATCCTaGCCTCTCCCACAGCGTCTT +
Preference number: 4 (lower is better)
Translates to: LRTKRDLRGHDVHAAASVPNAAS*PLPQRL
Trigger: AAGACGCTGTGGGAGAGGCCAGGATGCTGCATTAGG...CACAGAGGCAGCAGCATGGACATCATGGCCTCTCAGGTCCCTTTTGGTTCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548263.5
CDS-3UTR TCA 90 bp TTGGGGCATCAGACAAGGGAGTGTGAGTGTGAGTGTGTGTGTGCAGTGGCTGTGCTTCCATCCTGGCCTTaGGATATCTGTCCTCCCAAC +
Preference number: 4 (lower is better)
Translates to: LGHQTRECECECVCAVAVLPSWP*DICPPN
Trigger: GTTGGGAGGACAGATATCTCAAGGCCAGGATGGAAG...CACAGCCACTGCACACACACACTCACACTCACACTCCCTTGTCTGATGCCCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR TCA 90 bp GTATCAGAAGCAACCAGGGCTAGGAGTGGACGATTCTATTCCCACAGGGGAAGGAGGCAGCCTCCACCTTaGAGATGCCAATCCAGTCAC +
Preference number: 4 (lower is better)
Translates to: VSEATRARSGRFYSHRGRRQPPP*RCQSSH
Trigger: GTGACTGGATTGGCATCTTCAAGGTGGAGGCTGCCT...CCTTCCCCTGTGGGAATAGAATCGTCCACTCCTAGCCCTGGTTGCTTCTGATAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR TCA 90 bp ATAAATTCAGCCACTGCTTCCGAACAGGACCCCTCCCTGGGACAAAAGAGCCAGTGGGTCCTCTCCTCCTaGACTGCCTTCTCCAATCGA +
Preference number: 4 (lower is better)
Translates to: INSATASEQDPSLGQKSQWVLSS*TAFSNR
Trigger: TCGATTGGAGAAGGCAGTTCAGGAGGAGAGGACCCA...CTGGCTCTTTTGTCCCAGGGAGGGGTCCTGTTCGGAAGCAGTGGCTGAATTTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR TCA 90 bp ACGATTCTATTCCCACAGGGGAAGGCCTCCTCCATCCCGGTTCCTCCAAAACCACCCAGTGCTGGTTTCTaGCAGGGTACCCACTGTAAA +
Preference number: 4 (lower is better)
Translates to: TILFPQGKASSIPVPPKPPSAGF*QGTHCK
Trigger: TTTACAGTGGGTACCCTGTCAGAAACCAGCACTGGG...TGGTTTTGGAGGAACCGGGATGGAGGAGGCCTTCCCCTGTGGGAATAGAATCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000546443.5
ENST00000548263.5
ENST00000550804.6
CDS-3UTR TCA 90 bp GGAGTGGACGATTCTATTCCCACAGGGGAAGGCCTCCTCCATCCCGGTTCCTCCTTATTTCTTTCCATGTaGGGAGATGCGAGGAGAGGA +
Preference number: 4 (lower is better)
Translates to: GVDDSIPTGEGLLHPGSSLFLSM*GDARRG
Trigger: TCCTCTCCTCGCATCTCCTCACATGGAAAGAAATAA...GGAGGAACCGGGATGGAGGAGGCCTTCCCCTGTGGGAATAGAATCGTCCACTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000546443.5
ENST00000548263.5
ENST00000550804.6
CDS-3UTR TCA 90 bp ACCCACTCATGGCCAGCACACCAGGAGGCACGACAGGACAGTAACTGCCCAGCATTATTTCTTTCCATGTaGGGAGATGCGAGGAGAGGA +
Preference number: 4 (lower is better)
Translates to: THSWPAHQEARQDSNCPALFLSM*GDARRG
Trigger: TCCTCTCCTCGCATCTCCTCACATGGAAAGAAATAA...TGCTGGGCAGTTACTGTCCTGTCGTGCCTCCTGGTGTGCTGGCCATGAGTGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR TCA 90 bp GGTACAGTGATGGCTGCTATGAAGGGTGAAGTTCTCGGCAGTGGGAAACTTGTCAGTGACAGGGACCCATaGGTTTGCTCCCTCCCCAAC +
Preference number: 4 (lower is better)
Translates to: GTVMAAMKGEVLGSGKLVSDRDP*VCSLPN
Trigger: GTTGGGGAGGGAGCAAACTCATGGGTCCCTGTCACT...GACAAGTTTCCCACTGCCGAGAACTTCACCCTTCATAGCAGCCATCACTGTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR TCA 90 bp TTTCAGGGGATAAATTCAGCCACTGCTTCCGAACAGGACCCCTCCCTGGGACAAGTGGCACCCCCAGTCTaGAACTGCAAATTGCATGCC +
Preference number: 4 (lower is better)
Translates to: FQGINSATASEQDPSLGQVAPPV*NCKLHA
Trigger: GGCATGCAATTTGCAGTTTCAGACTGGGGGTGCCAC...TTGTCCCAGGGAGGGGTCCTGTTCGGAAGCAGTGGCTGAATTTATCCCCTGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR TCA 90 bp ACCAGGGCTAGGAGTGGACGATTCTATTCCCACAGGGGAAGGCCTCCTCCATCCGGGATAGGCAAACCATaGGTAAGGAAGAGAAATGGC +
Preference number: 4 (lower is better)
Translates to: TRARSGRFYSHRGRPPPSGIGKP*VRKRNG
Trigger: GCCATTTCTCTTCCTTACTCATGGTTTGCCTATCCC...GGATGGAGGAGGCCTTCCCCTGTGGGAATAGAATCGTCCACTCCTAGCCCTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR GCA 90 bp TTGGGGCATCAGACAAGGGAGTGTGAGTGTGAGTGTGTGTGTGCAGTGGCTGTGCCTTTTGCCGCTGCGTaGTCGGATCTAGGACTATAC +
Preference number: 4 (lower is better)
Translates to: LGHQTRECECECVCAVAVPFAAA*SDLGLY
Trigger: GTATAGTCCTAGATCCGAGCACGCAGCGGCAAAAGG...CACAGCCACTGCACACACACACTCACACTCACACTCCCTTGTCTGATGCCCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262059.8
CDS-3UTR GCA 90 bp AGGAATTGGCTTTGGGGCATCAGACAAGGGAGTGTGAGTGTGAGTGTGTGTGTGTCTTCTGCGCCCTTTTaGCGCTGCGTGCTCGGATCT +
Preference number: 4 (lower is better)
Translates to: RNWLWGIRQGSVSVSVCVSSAPF*RCVLGS
Trigger: AGATCCGAGCACGCAGCGGCAAAAGGGCGCAGAAGA...CACACACACACTCACACTCACACTCCCTTGTCTGATGCCCCAAAGCCAATTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262059.8
CDS-3UTR GCA 90 bp TCAGAAGCAACCAGGGCTAGGAGTGGACGATTCTATTCCCACAGGGGAAGGCCTAGGTCATTCCGTTCTTaGTGGCTCTCATCGAGCTGG +
Preference number: 4 (lower is better)
Translates to: SEATRARSGRFYSHRGRPRSFRS*WLSSSW
Trigger: CCAGCTCGATGAGAGCCAGCAAGAACGGAATGACCT...AGGCCTTCCCCTGTGGGAATAGAATCGTCCACTCCTAGCCCTGGTTGCTTCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR GCA 90 bp ACTTGTCCCACTTTTCCATGGCATGCACCCACCCTGGGACTAAACCCTGAGCAGAGGTCATTCCGTTCTTaGTGGCTCTCATCGAGCTGG +
Preference number: 4 (lower is better)
Translates to: TCPTFPWHAPTLGLNPEQRSFRS*WLSSSW
Trigger: CCAGCTCGATGAGAGCCAGCAAGAACGGAATGACCT...CTGCTCAGGGTTTAGTCCCAGGGTGGGTGCATGCCATGGAAAAGTGGGACAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR GCA 90 bp CAGAAAGAGGAACCAATGAAACTGAGAACCAAAAGGGACCTGAGAGGCCATGATGGTGCGGTCCCTGGCTaGTGCTGCACTGGCCAACTC +
Preference number: 4 (lower is better)
Translates to: QKEEPMKLRTKRDLRGHDGAVPG*CCTGQL
Trigger: GAGTTGGCCAGTGCAGCAGCAGCCAGGGACCGCACC...ATCATGGCCTCTCAGGTCCCTTTTGGTTCTCAGTTTCATTGGTTCCTCTTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR GCA 90 bp ATCCCGGTTCCTCCAAAACCACTTTCAGGGGATAAATTCAGCCACTGCTTCCGAGTAGTTCGGCTATGGTaGGGTCCCTGGCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: IPVPPKPLSGDKFSHCFRVVRLW*GPWLLL
Trigger: CAGCAGCAGCCAGGGACCGCACCATAGCCGAACTAC...TCGGAAGCAGTGGCTGAATTTATCCCCTGAAAGTGGTTTTGGAGGAACCGGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR GCA 90 bp CTGAGAACCAAAAGGGACCTGAGAGGCCATGATGTCCATGCTGCTGCCTCTGTGGCCCTGCCCGCTCCTTaGTCCATTGGCATTTTTCTT +
Preference number: 4 (lower is better)
Translates to: LRTKRDLRGHDVHAAASVALPAP*SIGIFL
Trigger: AAGAAAAATGCCAATGGAGCAAGGAGCGGGCAGGGC...CACAGAGGCAGCAGCATGGACATCATGGCCTCTCAGGTCCCTTTTGGTTCTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR GCA 90 bp AGTGGGGGAGTGGTGTGTTTGGATTCGTTCTTTCACCACCAAATACTGACGCGAACTCTGCAGCAGCCCTaGCCGCTCCTTGCTCCATTG +
Preference number: 4 (lower is better)
Translates to: SGGVVCLDSFFHHQILTRTLQQP*PLLAPL
Trigger: CAATGGAGCAAGGAGCGGGCAGGGCTGCTGCAGAGT...TCGCGTCAGTATTTGGTGGTGAAAGAACGAATCCAAACACACCACTCCCCCACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR GCA 90 bp CTGAGAACCAAAAGGGACCTGAGAGGCCATGATGTCCATGCTGCTGCCTCTGTGGATCTTGTCCTTCTCTaGCTCCACACTCTGCAGCAG +
Preference number: 4 (lower is better)
Translates to: LRTKRDLRGHDVHAAASVDLVLL*LHTLQQ
Trigger: CTGCTGCAGAGTGTGGAGGCAGAGAAGGACAAGATC...CACAGAGGCAGCAGCATGGACATCATGGCCTCTCAGGTCCCTTTTGGTTCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR GCA 90 bp TTTCAGGGGATAAATTCAGCCACTGCTTCCGAACAGGACCCCTCCCTGGGACAAATTCCACTTCTCATCTaGCACCTTCTCCAGGCGGGC +
Preference number: 4 (lower is better)
Translates to: FQGINSATASEQDPSLGQIPLLI*HLLQAG
Trigger: GCCCGCCTGGAGAAGGTGGCAGATGAGAAGTGGAAT...TTGTCCCAGGGAGGGGTCCTGTTCGGAAGCAGTGGCTGAATTTATCCCCTGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000546443.5
ENST00000548263.5
ENST00000550804.6
CDS-3UTR GCA 90 bp ATCCCGGTTCCTCCAAAACCACTTTCAGGGGATAAATTCAGCCACTGCTTCCGATGGCAGGGCCCCCAGTaGTGGTTTCTGACAGGGTAC +
Preference number: 4 (lower is better)
Translates to: IPVPPKPLSGDKFSHCFRWQGPQ*WFLTGY
Trigger: GTACCCTGTCAGAAACCAGCACTGGGGGCCCTGCCA...TCGGAAGCAGTGGCTGAATTTATCCCCTGAAAGTGGTTTTGGAGGAACCGGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000546443.5
ENST00000548263.5
ENST00000550804.6
CDS-3UTR GCA 90 bp GGGTCCTGGGTGCTGAAAAAGAAGTGTCCATCCATGTGGTCCTCCAGGGCATCCGATAAATTCAGCCACTaGTTCCGAACAGGACCCCTC +
Preference number: 4 (lower is better)
Translates to: GSWVLKKKCPSMWSSRASDKFSH*FRTGPL
Trigger: GAGGGGTCCTGTTCGGAAGCAGTGGCTGAATTTATC...GGATGCCCTGGAGGACCACATGGATGGACACTTCTTTTTCAGCACCCAGGACCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000548263.5
CDS-3UTR GCA 90 bp GCCATGTGGCTCCTGTGGGTGTATGTGCGGCTTGGCAGGGGCTGTGGCATGGGACAGGTCCTTAACAAATaGTTTACGATGCTGTGTATG +
Preference number: 4 (lower is better)
Translates to: AMWLLWVYVRLGRGCGMGQVLNK*FTMLCM
Trigger: CATACACAGCATCGTAAAGCATTTGTTAAGGACCTG...TCCCATGCCACAGCCCCTGCCAAGCCGCACATACACCCACAGGAGCCACATGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR GCA 90 bp GGAGTGGACGATTCTATTCCCACAGGGGAAGGCCTCCTCCATCCCGGTTCCTCCATTAAATGCACCTCCTaGTGGGGATGTTGGCTCATA +
Preference number: 4 (lower is better)
Translates to: GVDDSIPTGEGLLHPGSSIKCTS*WGCWLI
Trigger: TATGAGCCAACATCCCCAGCAGGAGGTGCATTTAAT...GGAGGAACCGGGATGGAGGAGGCCTTCCCCTGTGGGAATAGAATCGTCCACTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR GCA 90 bp GAGAAGGGAGCTATTGGGTTGGAGGACGAGGGGGTTGTAGGCATGTGCTTGTGCAGATCTATCGGCTTTTaGATGGATGCTGGGGAGCAG +
Preference number: 4 (lower is better)
Translates to: EKGAIGLEDEGVVGMCLCRSIGF*MDAGEQ
Trigger: CTGCTCCCCAGCATCCATGCAAAAGCCGATAGATCT...GCACAAGCACATGCCTACAACCCCCTCGTCCTCCAACCCAATAGCTCCCTTCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR GCA 90 bp ATCCCGGTTCCTCCAAAACCACTTTCAGGGGATAAATTCAGCCACTGCTTCCGACCTCCCTCCTGGCCTTaGTGGTTGAACTCACCTGGC +
Preference number: 4 (lower is better)
Translates to: IPVPPKPLSGDKFSHCFRPPSWP*WLNSPG
Trigger: GCCAGGTGAGTTCAACCAGCAAGGCCAGGAGGGAGG...TCGGAAGCAGTGGCTGAATTTATCCCCTGAAAGTGGTTTTGGAGGAACCGGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548263.5
CDS-3UTR GCA 90 bp AGAGAGGGTAGGGTGCCCCAGGAATTGGCTTTGGGGCATCAGACAAGGGAGTGTCTCTTCTTTAGTCCCTaGTGGTCTCTGCAGTGCAGA +
Preference number: 4 (lower is better)
Translates to: REGRVPQELALGHQTRECLFFSP*WSLQCR
Trigger: TCTGCACTGCAGAGACCAGCAGGGACTAAAGAAGAG...ACACTCCCTTGTCTGATGCCCCAAAGCCAATTCCTGGGGCACCCTACCCTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548263.5
CDS-3UTR CCA 90 bp TTGAGCCCCCTCTGTGTCGGGGACCATGCTTTGGATACTGGGATAGGCAAACCAATTCCACCTTGGTGTTaGGGATGTAGGTCCGGGCTA +
Preference number: 4 (lower is better)
Translates to: LSPLCVGDHALDTGIGKPIPPWC*GCRSGL
Trigger: TAGCCCGGACCTACATCCCCAACACCAAGGTGGAAT...TGGTTTGCCTATCCCAGTATCCAAAGCATGGTCCCCGACACAGAGGGGGCTCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR CCA 90 bp CAGAAGCAACCAGGGCTAGGAGTGGACGATTCTATTCCCACAGGGGAAGGCCTCGGACACTGGTGTGAATaGGGGAACCATCAGTTGTAC +
Preference number: 4 (lower is better)
Translates to: QKQPGLGVDDSIPTGEGLGHWCE*GNHQLY
Trigger: GTACAACTGATGGTTCCCCCATTCACACCAGTGTCC...GAGGCCTTCCCCTGTGGGAATAGAATCGTCCACTCCTAGCCCTGGTTGCTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CCA 90 bp ATAAATTCAGCCACTGCTTCCGAACAGGACCCCTCCCTGGGACAAAAGAGCCAGGTTTGGGCAGGTAGCTaGCTTGGAACTGGACACTGG +
Preference number: 4 (lower is better)
Translates to: INSATASEQDPSLGQKSQVWAGS*LGTGHW
Trigger: CCAGTGTCCAGTTCCAAGCCAGCTACCTGCCCAAAC...CTGGCTCTTTTGTCCCAGGGAGGGGTCCTGTTCGGAAGCAGTGGCTGAATTTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262059.8
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CCA 90 bp TGTGTATCAGAAGCAACCAGGGCTAGGAGTGGACGATTCTATTCCCACAGGGGAGCTGAGCTCCTGGTTTaGGCAGGTAGCTGGCTTGGA +
Preference number: 4 (lower is better)
Translates to: CVSEATRARSGRFYSHRGAELLV*AGSWLG
Trigger: TCCAAGCCAGCTACCTGCCCAAACCAGGAGCTCAGC...TCCCCTGTGGGAATAGAATCGTCCACTCCTAGCCCTGGTTGCTTCTGATACACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262059.8
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CCA 90 bp CTCAAAGGTGAAGGGGTCCTGGGTGCTGAAAAAGAAGTGTCCATCCATGTGGTCGTAGAGCTGAGCTCCTaGTTTGGGCAGGTAGCTGGC +
Preference number: 4 (lower is better)
Translates to: LKGEGVLGAEKEVSIHVVVELSS*FGQVAG
Trigger: GCCAGCTACCTGCCCAAACCAGGAGCTCAGCTCTAC...GACCACATGGATGGACACTTCTTTTTCAGCACCCAGGACCCCTTCACCTTTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000548263.5
CDS-3UTR CCA 90 bp AGGAATTGGCTTTGGGGCATCAGACAAGGGAGTGTGAGTGTGAGTGTGTGTGTGCCACACACCTGGCCCTaGCGGTTCACATATCGGAAC +
Preference number: 4 (lower is better)
Translates to: RNWLWGIRQGSVSVSVCVPHTWP*RFTYRN
Trigger: GTTCCGATATGTGAACCGCCAGGGCCAGGTGTGTGG...CACACACACACTCACACTCACACTCCCTTGTCTGATGCCCCAAAGCCAATTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262059.8
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CCA 90 bp GGTACAGTGATGGCTGCTATGAAGGGTGAAGTTCTCGGCAGTGGGAAACTTGTCCTCTGCCCACACACCTaGCCCTGGCGGTTCACATAT +
Preference number: 4 (lower is better)
Translates to: GTVMAAMKGEVLGSGKLVLCPHT*PWRFTY
Trigger: ATATGTGAACCGCCAGGGCCAGGTGTGTGGGCAGAG...GACAAGTTTCCCACTGCCGAGAACTTCACCCTTCATAGCAGCCATCACTGTACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR CCA 90 bp AGACTTCGGAGAGCAGGACCCATGTGCCTGGGTTCCCAGGTTATCCTGTGCCTAGTAACACAGTTGCCTTaGGGACAACCAGCAGGATGT +
Preference number: 4 (lower is better)
Translates to: RLRRAGPMCLGSQVILCLVTQLP*GQPAGC
Trigger: ACATCCTGCTGGTTGTCCCCAAGGCAACTGTGTTAC...TAGGCACAGGATAACCTGGGAACCCAGGCACATGGGTCCTGCTCTCCGAAGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548263.5
CDS-3UTR CCA 90 bp TGCAGTGGCTGTGTATCAGAAGCAACCAGGGCTAGGAGTGGACGATTCTATTCCCCTCCCCAAGAAGGGTaGCTTTCTGCTGGCTTGAGG +
Preference number: 4 (lower is better)
Translates to: CSGCVSEATRARSGRFYSPPQEG*LSAGLR
Trigger: CCTCAAGCCAGCAGAAAGCCACCCTTCTTGGGGAGG...GGAATAGAATCGTCCACTCCTAGCCCTGGTTGCTTCTGATACACAGCCACTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CCA 90 bp TCCATCCCGGTTCCTCCAAAACCACTTTCAGGGGATAAATTCAGCCACTGCTTCGGTGTAGTTCGGCTATaGTGCGGTCCCTGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: SIPVPPKPLSGDKFSHCFGVVRL*CGPWLL
Trigger: CAGCAGCCAGGGACCGCACCATAGCCGAACTACACC...GAAGCAGTGGCTGAATTTATCCCCTGAAAGTGGTTTTGGAGGAACCGGGATGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CCA 90 bp TCAGAAGCAACCAGGGCTAGGAGTGGACGATTCTATTCCCACAGGGGAAGGCCTCCTCCTCATCCTCTGTaGTGGCATCCTCATTCCACT +
Preference number: 4 (lower is better)
Translates to: SEATRARSGRFYSHRGRPPPHPL*WHPHST
Trigger: AGTGGAATGAGGATGCCACCACAGAGGATGAGGAGG...AGGCCTTCCCCTGTGGGAATAGAATCGTCCACTCCTAGCCCTGGTTGCTTCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000546443.5
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CCA 90 bp TTGAGCCCCCTCTGTGTCGGGGACCATGCTTTGGATACTGGGATAGGCAAACCAACAAAGGCCATAGGGTaGGAGCCTCATGTCTTCTGG +
Preference number: 4 (lower is better)
Translates to: LSPLCVGDHALDTGIGKPTKAIG*EPHVFW
Trigger: CCAGAAGACATGAGGCTCCCACCCTATGGCCTTTGT...TGGTTTGCCTATCCCAGTATCCAAAGCATGGTCCCCGACACAGAGGGGGCTCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR CCA 90 bp TTGGGGCATCAGACAAGGGAGTGTGAGTGTGAGTGTGTGTGTGCAGTGGCTGTGAAGTGTCCATCCATGTaGTCCTCCAGGGCATCCTTG +
Preference number: 4 (lower is better)
Translates to: LGHQTRECECECVCAVAVKCPSM*SSRASL
Trigger: CAAGGATGCCCTGGAGGACCACATGGATGGACACTT...CACAGCCACTGCACACACACACTCACACTCACACTCCCTTGTCTGATGCCCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000546443.5
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CCA 90 bp GGGTTCCCAGGTTATCCTGTGCCTAATGCAGCATCCTGGCCTCTCCCACAGCGTAAGGTGAAGGGGTCCTaGGTGCTGAAAAAGAAGTGT +
Preference number: 4 (lower is better)
Translates to: GFPGYPVPNAASWPLPQRKVKGS*VLKKKC
Trigger: ACACTTCTTTTTCAGCACCCAGGACCCCTTCACCTT...ACGCTGTGGGAGAGGCCAGGATGCTGCATTAGGCACAGGATAACCTGGGAACCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000548263.5
CDS-3UTR CCA 90 bp TTGGGGCATCAGACAAGGGAGTGTGAGTGTGAGTGTGTGTGTGCAGTGGCTGTGCCCAGGAATTGGCTTTaGGGCATCAGACAAGGGAGT +
Preference number: 4 (lower is better)
Translates to: LGHQTRECECECVCAVAVPRNWL*GIRQGS
Trigger: ACTCCCTTGTCTGATGCCCCAAAGCCAATTCCTGGG...CACAGCCACTGCACACACACACTCACACTCACACTCCCTTGTCTGATGCCCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000546443.5
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CCA 90 bp ATAAATTCAGCCACTGCTTCCGAACAGGACCCCTCCCTGGGACAAAAGAGCCAGGGGTGCCCCAGGAATTaGCTTTGGGGCATCAGACAA +
Preference number: 4 (lower is better)
Translates to: INSATASEQDPSLGQKSQGCPRN*LWGIRQ
Trigger: TTGTCTGATGCCCCAAAGCCAATTCCTGGGGCACCC...CTGGCTCTTTTGTCCCAGGGAGGGGTCCTGTTCGGAAGCAGTGGCTGAATTTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 5 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000546443.5
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CCA 90 bp AGGGTGCCCCAGGAATTGGCTTTGGGGCATCAGACAAGGGAGTGTGAGTGTGAGGGGCACAGAAGTCAATaGGGGAACAGAAAGAGGAAC +
Preference number: 4 (lower is better)
Translates to: RVPQELALGHQTRECECEGHRSQ*GNRKRN
Trigger: GTTCCTCTTTCTGTTCCCCCATTGACTTCTGTGCCC...CTCACACTCACACTCCCTTGTCTGATGCCCCAAAGCCAATTCCTGGGGCACCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000546443.5
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CCA 90 bp TCAGAAGCAACCAGGGCTAGGAGTGGACGATTCTATTCCCACAGGGGAAGGCCTTGGAAAAGGCTAGGGTaGGGCACAGAAGTCAATGGG +
Preference number: 4 (lower is better)
Translates to: SEATRARSGRFYSHRGRPWKRLG*GTEVNG
Trigger: CCCATTGACTTCTGTGCCCCACCCTAGCCTTTTCCA...AGGCCTTCCCCTGTGGGAATAGAATCGTCCACTCCTAGCCCTGGTTGCTTCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000546443.5
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CCA 90 bp TCAGAAGCAACCAGGGCTAGGAGTGGACGATTCTATTCCCACAGGGGAAGGCCTAAGCTTTTATTGCTGTaGGGGGACCTGGAGAGGGAG +
Preference number: 4 (lower is better)
Translates to: SEATRARSGRFYSHRGRPKLLLL*GDLERE
Trigger: CTCCCTCTCCAGGTCCCCCCACAGCAATAAAAGCTT...AGGCCTTCCCCTGTGGGAATAGAATCGTCCACTCCTAGCCCTGGTTGCTTCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000546443.5
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CCA 90 bp GTCCTCCAGGGCATCCTTGTCACTCTCAGCAGGAAAGCGCTCCTTACAGATAGGAAGCTTTTATTGCTGTaGGGGGACCTGGAGAGGGAG +
Preference number: 4 (lower is better)
Translates to: VLQGILVTLSRKALLTDRKLLLL*GDLERE
Trigger: CTCCCTCTCCAGGTCCCCCCACAGCAATAAAAGCTT...CCTATCTGTAAGGAGCGCTTTCCTGCTGAGAGTGACAAGGATGCCCTGGAGGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000548263.5
CDS-3UTR CCA 90 bp ATGAAACTGAGAACCAAAAGGGACCTGAGAGGCCATGATGTCCATGCTGCTGCCCCAGGGTCTAAGAGCTaGAGGTCTGGGCCCTGTGTT +
Preference number: 4 (lower is better)
Translates to: MKLRTKRDLRGHDVHAAAPGSKS*RSGPCV
Trigger: AACACAGGGCCCAGACCTCCAGCTCTTAGACCCTGG...GGCAGCAGCATGGACATCATGGCCTCTCAGGTCCCTTTTGGTTCTCAGTTTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR CCA 90 bp GTATCAGAAGCAACCAGGGCTAGGAGTGGACGATTCTATTCCCACAGGGGAAGGTGTCCCACTTTTCCATaGCATGCACCCACCCTGGGA +
Preference number: 4 (lower is better)
Translates to: VSEATRARSGRFYSHRGRCPTFP*HAPTLG
Trigger: TCCCAGGGTGGGTGCATGCCATGGAAAAGTGGGACA...CCTTCCCCTGTGGGAATAGAATCGTCCACTCCTAGCCCTGGTTGCTTCTGATAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR CCA 90 bp ATCCCGGTTCCTCCAAAACCACTTTCAGGGGATAAATTCAGCCACTGCTTCCGAGGAGAAAGGGAATGGTaGGGGTGGTCCACACAGGGG +
Preference number: 4 (lower is better)
Translates to: IPVPPKPLSGDKFSHCFRGEREW*GWSTQG
Trigger: CCCCTGTGTGGACCACCCCCACCATTCCCTTTCTCC...TCGGAAGCAGTGGCTGAATTTATCCCCTGAAAGTGGTTTTGGAGGAACCGGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR CCA 90 bp TGCAGTGGCTGTGTATCAGAAGCAACCAGGGCTAGGAGTGGACGATTCTATTCCAAGGCAGCCACTCACTaGAAGCCAGGAGGTGTGGGT +
Preference number: 4 (lower is better)
Translates to: CSGCVSEATRARSGRFYSKAATH*KPGGVG
Trigger: ACCCACACCTCCTGGCTTCCAGTGAGTGGCTGCCTT...GGAATAGAATCGTCCACTCCTAGCCCTGGTTGCTTCTGATACACAGCCACTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR CCA 90 bp CCAGACTCCCACTTGAGACAACCCACTCATGGCCAGCACACCAGGAGGCACGACAGTAAGGAAGAGAAATaGCCCCACATTTTGTGGCAC +
Preference number: 4 (lower is better)
Translates to: PDSHLRQPTHGQHTRRHDSKEEK*PHILWH
Trigger: GTGCCACAAAATGTGGGGCCATTTCTCTTCCTTACT...GTCGTGCCTCCTGGTGTGCTGGCCATGAGTGGGTTGTCTCAAGTGGGAGTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR CCA 90 bp ACCAGGGCTAGGAGTGGACGATTCTATTCCCACAGGGGAAGGCCTCCTCCATCCGGTGAAGACCCTGACTaGCACACTAAGCAATCTACA +
Preference number: 4 (lower is better)
Translates to: TRARSGRFYSHRGRPPPSGEDPD*HTKQST
Trigger: TGTAGATTGCTTAGTGTGCCAGTCAGGGTCTTCACC...GGATGGAGGAGGCCTTCCCCTGTGGGAATAGAATCGTCCACTCCTAGCCCTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR CCA 90 bp TGCAGCATCCTGGCCTCTCCCACAGCGTCTTTCTCCCCACAATCCTGGAAGGCTTGTATCTCCTTTTCTTaGCTGAGGCCAAGAAGGGCA +
Preference number: 4 (lower is better)
Translates to: CSILASPTASFSPQSWKACISFS*LRPRRA
Trigger: TGCCCTTCTTGGCCTCAGCCAAGAAAAGGAGATACA...AGCCTTCCAGGATTGTGGGGAGAAAGACGCTGTGGGAGAGGCCAGGATGCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548263.5
3UTR CAA 72 bp AATTTCCTTGGAAGGGATTCAGGGAACGGGATGGGGTaGCTAGGAGACGGAGACGTGAGGGAAGAAGGAACG +
Preference number: 4 (lower is better)
Translates to: NFLGRDSGNGMG*LGDGDVREEGT
Trigger: CGTTCCTTCTTCCCTCACGTCTCCGTCTCCTAGCAACCCCATCCCGTTCCCTGAATCCCTTCCAAGGAAATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR TCA 90 bp CTCCAAAACCACTTTCAGGGGATAAATTCAGCCACTGCTTCCGAACAGGACCCCAGGCAGCCTCCACCTTaGAGATGCCAATCCAGTCAC +
Preference number: 4 (lower is better)
Translates to: LQNHFQGINSATASEQDPRQPPP*RCQSSH
Trigger: GTGACTGGATTGGCATCTTCAAGGTGGAGGCTGCCT...GGGGTCCTGTTCGGAAGCAGTGGCTGAATTTATCCCCTGAAAGTGGTTTTGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR TCA 90 bp TCAGAAGCAACCAGGGCTAGGAGTGGACGATTCTATTCCCACAGGGGAAGGCCTCTCCCGCTTACTTTCTaGCAACTGTACCAGGCTAGA +
Preference number: 4 (lower is better)
Translates to: SEATRARSGRFYSHRGRPLPLTF*QLYQAR
Trigger: TCTAGCCTGGTACAGTTGTCAGAAAGTAAGCGGGAG...AGGCCTTCCCCTGTGGGAATAGAATCGTCCACTCCTAGCCCTGGTTGCTTCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR TCA 90 bp TGTGTGAGTGTGTGTGTGCATGAGTGTGTATTTGTGCATGTACGAGGGAGTAAGTGGGGACTCGTCCTCTaGGTCTGTCAGAGCTGCCGG +
Preference number: 4 (lower is better)
Translates to: CVSVCVHECVFVHVRGSKWGLVL*VCQSCR
Trigger: CCGGCAGCTCTGACAGACTCAGAGGACGAGTCCCCA...CTTACTCCCTCGTACATGCACAAATACACACTCATGCACACACACACTCACACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000546443.5
ENST00000548263.5
ENST00000550804.6
CDS-3UTR TCA 90 bp GGTACAGTGATGGCTGCTATGAAGGGTGAAGTTCTCGGCAGTGGGAAACTTGTCGGCTGCTATGAAGGGTaGAGTTCTCGGCAGTGGGAA +
Preference number: 4 (lower is better)
Translates to: GTVMAAMKGEVLGSGKLVGCYEG*SSRQWE
Trigger: TTCCCACTGCCGAGAACTTCACCCTTCATAGCAGCC...GACAAGTTTCCCACTGCCGAGAACTTCACCCTTCATAGCAGCCATCACTGTACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR TCA 90 bp TCAGAAGCAACCAGGGCTAGGAGTGGACGATTCTATTCCCACAGGGGAAGGCCTGTGTGCATACAGGTATaGGGGGATGGCAACAGAGAA +
Preference number: 4 (lower is better)
Translates to: SEATRARSGRFYSHRGRPVCIQV*GDGNRE
Trigger: TTCTCTGTTGCCATCCCCTCATACCTGTATGCACAC...AGGCCTTCCCCTGTGGGAATAGAATCGTCCACTCCTAGCCCTGGTTGCTTCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR TCA 90 bp TTGAGCCCCCTCTGTGTCGGGGACCATGCTTTGGATACTGGGATAGGCAAACCAGTGTGCATACAGGTATaGGGGGATGGCAACAGAGAA +
Preference number: 4 (lower is better)
Translates to: LSPLCVGDHALDTGIGKPVCIQV*GDGNRE
Trigger: TTCTCTGTTGCCATCCCCTCATACCTGTATGCACAC...TGGTTTGCCTATCCCAGTATCCAAAGCATGGTCCCCGACACAGAGGGGGCTCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR TCA 90 bp ACCCACTCATGGCCAGCACACCAGGAGGCACGACAGGACAGTAACTGCCCAGCAATGAATGTGTTTTTGTaGCTGTTGAGGCAGAGTGTG +
Preference number: 4 (lower is better)
Translates to: THSWPAHQEARQDSNCPAMNVFL*LLRQSV
Trigger: CACACTCTGCCTCAACAGTCACAAAAACACATTCAT...TGCTGGGCAGTTACTGTCCTGTCGTGCCTCCTGGTGTGCTGGCCATGAGTGGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR TCA 90 bp TCCATCCCGGTTCCTCCAAAACCACTTTCAGGGGATAAATTCAGCCACTGCTTCGCAGATTCGGGACAGTaGAGCAGAACAGGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: SIPVPPKPLSGDKFSHCFADSGQ*SRTGLE
Trigger: CTCCAGCCCTGTTCTGCTTCACTGTCCCGAATCTGC...GAAGCAGTGGCTGAATTTATCCCCTGAAAGTGGTTTTGGAGGAACCGGGATGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR TCA 90 bp ATGAAACTGAGAACCAAAAGGGACCTGAGAGGCCATGATGTCCATGCTGCTGCCGTGGCACCCCCAGTCTaGAACTGCAAATTGCATGCC +
Preference number: 4 (lower is better)
Translates to: MKLRTKRDLRGHDVHAAAVAPPV*NCKLHA
Trigger: GGCATGCAATTTGCAGTTTCAGACTGGGGGTGCCAC...GGCAGCAGCATGGACATCATGGCCTCTCAGGTCCCTTTTGGTTCTCAGTTTCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR TCA 90 bp ATCCCGGTTCCTCCAAAACCACTTTCAGGGGATAAATTCAGCCACTGCTTCCGATCAATTACCCTTCCTTaGGCCCCCTCTGTGTCGGGG +
Preference number: 4 (lower is better)
Translates to: IPVPPKPLSGDKFSHCFRSITLP*APSVSG
Trigger: CCCCGACACAGAGGGGGCTCAAGGAAGGGTAATTGA...TCGGAAGCAGTGGCTGAATTTATCCCCTGAAAGTGGTTTTGGAGGAACCGGGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR TCA 90 bp ACCCACTCATGGCCAGCACACCAGGAGGCACGACAGGACAGTAACTGCCCAGCACAGGGAGGAAAGGGATaGTCCATTATAGAAGAGAAA +
Preference number: 4 (lower is better)
Translates to: THSWPAHQEARQDSNCPAQGGKG*SIIEEK
Trigger: TTTCTCTTCTATAATGGATCATCCCTTTCCTCCCTG...TGCTGGGCAGTTACTGTCCTGTCGTGCCTCCTGGTGTGCTGGCCATGAGTGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR GCA 90 bp TGTGTGAGTGTGTGTGTGCATGAGTGTGTATTTGTGCATGTACGAGGGAGTAAGGCCCTCTCGAGCTCCTaGACTCGGCTCCTCAGCTCT +
Preference number: 4 (lower is better)
Translates to: CVSVCVHECVFVHVRGSKALSSS*TRLLSS
Trigger: AGAGCTGAGGAGCCGAGTGCAGGAGCTCGAGAGGGC...CTTACTCCCTCGTACATGCACAAATACACACTCATGCACACACACACTCACACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR GCA 90 bp ATCCCGGTTCCTCCAAAACCACTTTCAGGGGATAAATTCAGCCACTGCTTCCGAGCACTCTGCTCCTCTTaGCAGCTCTTCGCCTCCTTC +
Preference number: 4 (lower is better)
Translates to: IPVPPKPLSGDKFSHCFRALCSS*QLFASF
Trigger: GAAGGAGGCGAAGAGCTGGCAAGAGGAGCAGAGTGC...TCGGAAGCAGTGGCTGAATTTATCCCCTGAAAGTGGTTTTGGAGGAACCGGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262059.8
ENST00000548263.5
ENST00000550804.6
CDS-3UTR GCA 90 bp GTAAGATCACTCAAAGGTGAAGGGGTCCTGGGTGCTGAAAAAGAAGTGTCCATCGTAGTTCGGCTATGGTaGGGTCCCTGGCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: VRSLKGEGVLGAEKEVSIVVRLW*GPWLLL
Trigger: CAGCAGCAGCCAGGGACCGCACCATAGCCGAACTAC...GATGGACACTTCTTTTTCAGCACCCAGGACCCCTTCACCTTTGAGTGATCTTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000548263.5
CDS-3UTR GCA 90 bp AGAGAGGGTAGGGTGCCCCAGGAATTGGCTTTGGGGCATCAGACAAGGGAGTGTTTTTCTTCCTTCAAGTaGAAACCGAGCTCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: REGRVPQELALGHQTRECFSSFK*KPSSAS
Trigger: GCTGGCTGAGCTCGGTTTGCACTTGAAGGAAGAAAA...ACACTCCCTTGTCTGATGCCCCAAAGCCAATTCCTGGGGCACCCTACCCTCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR GCA 90 bp ATAAATTCAGCCACTGCTTCCGAACAGGACCCCTCCCTGGGACAAAAGAGCCAGGATCTTGTCCTTCTCTaGCTCCACACTCTGCAGCAG +
Preference number: 4 (lower is better)
Translates to: INSATASEQDPSLGQKSQDLVLL*LHTLQQ
Trigger: CTGCTGCAGAGTGTGGAGGCAGAGAAGGACAAGATC...CTGGCTCTTTTGTCCCAGGGAGGGGTCCTGTTCGGAAGCAGTGGCTGAATTTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR GCA 90 bp GTATCAGAAGCAACCAGGGCTAGGAGTGGACGATTCTATTCCCACAGGGGAAGGGATCTTGTCCTTCTCTaGCTCCACACTCTGCAGCAG +
Preference number: 4 (lower is better)
Translates to: VSEATRARSGRFYSHRGRDLVLL*LHTLQQ
Trigger: CTGCTGCAGAGTGTGGAGGCAGAGAAGGACAAGATC...CCTTCCCCTGTGGGAATAGAATCGTCCACTCCTAGCCCTGGTTGCTTCTGATAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR GCA 90 bp GGAGTGGACGATTCTATTCCCACAGGGGAAGGCCTCCTCCATCCCGGTTCCTCCCAATCGAAGTATCTCTaGACTCAGCTTCAGGATCTT +
Preference number: 4 (lower is better)
Translates to: GVDDSIPTGEGLLHPGSSQSKYL*TQLQDL
Trigger: AAGATCCTGAAGCTGAGTGCAGAGATACTTCGATTG...GGAGGAACCGGGATGGAGGAGGCCTTCCCCTGTGGGAATAGAATCGTCCACTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR GCA 90 bp GAGAAGGGAGCTATTGGGTTGGAGGACGAGGGGGTTGTAGGCATGTGCTTGTGCTTCTCCTCCTGTAACTaGTCCTTTTCCTTCTGGAGC +
Preference number: 4 (lower is better)
Translates to: EKGAIGLEDEGVVGMCLCFSSCN*SFSFWS
Trigger: GCTCCAGAAGGAAAAGGAGCAGTTACAGGAGGAGAA...GCACAAGCACATGCCTACAACCCCCTCGTCCTCCAACCCAATAGCTCCCTTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR GCA 90 bp AAAACTCAGGTAAACCAACGGAAACTCCAAATAAGAGAGGGTAGGGTGCCCCAGTGGCAGGGCCCCCAGTaGTGGTTTCTGACAGGGTAC +
Preference number: 4 (lower is better)
Translates to: KTQVNQRKLQIREGRVPQWQGPQ*WFLTGY
Trigger: GTACCCTGTCAGAAACCAGCACTGGGGGCCCTGCCA...CTGGGGCACCCTACCCTCTCTTATTTGGAGTTTCCGTTGGTTTACCTGAGTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000546443.5
ENST00000548263.5
ENST00000550804.6
CDS-3UTR GCA 90 bp AAACTGAGAACCAAAAGGGACCTGAGAGGCCATGATGTCCATGCTGCTGCCTCTTGCTCCCTCCCCAACTaGCGCATTATCCAAGCCAGA +
Preference number: 4 (lower is better)
Translates to: KLRTKRDLRGHDVHAAASCSLPN*RIIQAR
Trigger: TCTGGCTTGGATAATGCGGCAGTTGGGGAGGGAGCA...AGAGGCAGCAGCATGGACATCATGGCCTCTCAGGTCCCTTTTGGTTCTCAGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR GCA 90 bp TTTCAGGGGATAAATTCAGCCACTGCTTCCGAACAGGACCCCTCCCTGGGACAACTGTGTCGGGGACCATaGTTTGGATACTGGGATAGG +
Preference number: 4 (lower is better)
Translates to: FQGINSATASEQDPSLGQLCRGP*FGYWDR
Trigger: CCTATCCCAGTATCCAAAGCATGGTCCCCGACACAG...TTGTCCCAGGGAGGGGTCCTGTTCGGAAGCAGTGGCTGAATTTATCCCCTGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR CCA 90 bp TTGGGGCATCAGACAAGGGAGTGTGAGTGTGAGTGTGTGTGTGCAGTGGCTGTGCAGAAAACGAGGGTGTaGCCAGCAAAGGACTTCAAG +
Preference number: 4 (lower is better)
Translates to: LGHQTRECECECVCAVAVQKTRV*PAKDFK
Trigger: CTTGAAGTCCTTTGCTGGCCACACCCTCGTTTTCTG...CACAGCCACTGCACACACACACTCACACTCACACTCCCTTGTCTGATGCCCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262059.8
CDS-3UTR CCA 90 bp CTGACATCTCCTTTCACATTAGAGTCTCAAGCCCATTCAGATCTATCGGCTTTTGGGGAGGGAGAAGAGTaGGCGCGAGGGCTTCTGGGG +
Preference number: 4 (lower is better)
Translates to: LTSPFTLESQAHSDLSAFGEGEE*ARGLLG
Trigger: CCCCAGAAGCCCTCGCGCCCACTCTTCTCCCTCCCC...AAAAGCCGATAGATCTGAATGGGCTTGAGACTCTAATGTGAAAGGAGATGTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262059.8
CDS-3UTR CCA 90 bp ATAAATTCAGCCACTGCTTCCGAACAGGACCCCTCCCTGGGACAAAAGAGCCAGATTCCACCTTGGTGTTaGGGATGTAGGTCCGGGCTA +
Preference number: 4 (lower is better)
Translates to: INSATASEQDPSLGQKSQIPPWC*GCRSGL
Trigger: TAGCCCGGACCTACATCCCCAACACCAAGGTGGAAT...CTGGCTCTTTTGTCCCAGGGAGGGGTCCTGTTCGGAAGCAGTGGCTGAATTTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CCA 90 bp ACGATTCTATTCCCACAGGGGAAGGCCTCCTCCATCCCGGTTCCTCCAAAACCAAGTGACATTCCACCTTaGTGTTGGGGATGTAGGTCC +
Preference number: 4 (lower is better)
Translates to: TILFPQGKASSIPVPPKPSDIPP*CWGCRS
Trigger: GGACCTACATCCCCAACACCAAGGTGGAATGTCACT...TGGTTTTGGAGGAACCGGGATGGAGGAGGCCTTCCCCTGTGGGAATAGAATCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CCA 90 bp TGTGTGAGTGTGTGTGTGCATGAGTGTGTATTTGTGCATGTACGAGGGAGTAAGCACTGGCACTGGGCATaGTGCCTGGGGGAAGGGTGT +
Preference number: 4 (lower is better)
Translates to: CVSVCVHECVFVHVRGSKHWHWA*CLGEGC
Trigger: ACACCCTTCCCCCAGGCACCATGCCCAGTGCCAGTG...CTTACTCCCTCGTACATGCACAAATACACACTCATGCACACACACACTCACACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CCA 90 bp TCAGAAGCAACCAGGGCTAGGAGTGGACGATTCTATTCCCACAGGGGAAGGCCTGGACACTGGTGTGAATaGGGGAACCATCAGTTGTAC +
Preference number: 4 (lower is better)
Translates to: SEATRARSGRFYSHRGRPGHWCE*GNHQLY
Trigger: GTACAACTGATGGTTCCCCCATTCACACCAGTGTCC...AGGCCTTCCCCTGTGGGAATAGAATCGTCCACTCCTAGCCCTGGTTGCTTCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CCA 90 bp CTGAGAACCAAAAGGGACCTGAGAGGCCATGATGTCCATGCTGCTGCCTCTGTGCTTGGAACTGGACACTaGTGTGAATGGGGGAACCAT +
Preference number: 4 (lower is better)
Translates to: LRTKRDLRGHDVHAAASVLGTGH*CEWGNH
Trigger: ATGGTTCCCCCATTCACACCAGTGTCCAGTTCCAAG...CACAGAGGCAGCAGCATGGACATCATGGCCTCTCAGGTCCCTTTTGGTTCTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CCA 90 bp ATGAAACTGAGAACCAAAAGGGACCTGAGAGGCCATGATGTCCATGCTGCTGCCGTTTGGGCAGGTAGCTaGCTTGGAACTGGACACTGG +
Preference number: 4 (lower is better)
Translates to: MKLRTKRDLRGHDVHAAAVWAGS*LGTGHW
Trigger: CCAGTGTCCAGTTCCAAGCCAGCTACCTGCCCAAAC...GGCAGCAGCATGGACATCATGGCCTCTCAGGTCCCTTTTGGTTCTCAGTTTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262059.8
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CCA 90 bp GTCCTCCAGGGCATCCTTGTCACTCTCAGCAGGAAAGCGCTCCTTACAGATAGGTGGCTCTCATCGAGCTaGTTCTGTAACACAGTTGCC +
Preference number: 4 (lower is better)
Translates to: VLQGILVTLSRKALLTDRWLSSS*FCNTVA
Trigger: GGCAACTGTGTTACAGAACCAGCTCGATGAGAGCCA...CCTATCTGTAAGGAGCGCTTTCCTGCTGAGAGTGACAAGGATGCCCTGGAGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548263.5
CDS-3UTR CCA 90 bp TTGAGCCCCCTCTGTGTCGGGGACCATGCTTTGGATACTGGGATAGGCAAACCATCATTCCGTTCTTGCTaGCTCTCATCGAGCTGGTTC +
Preference number: 4 (lower is better)
Translates to: LSPLCVGDHALDTGIGKPSFRSC*LSSSWF
Trigger: GAACCAGCTCGATGAGAGCCAGCAAGAACGGAATGA...TGGTTTGCCTATCCCAGTATCCAAAGCATGGTCCCCGACACAGAGGGGGCTCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR CCA 90 bp ATGAAACTGAGAACCAAAAGGGACCTGAGAGGCCATGATGTCCATGCTGCTGCCTCTGTGATCTCCCCATaGGACCGGGAAATCCCCTTG +
Preference number: 4 (lower is better)
Translates to: MKLRTKRDLRGHDVHAAASVISP*DREIPL
Trigger: CAAGGGGATTTCCCGGTCCCATGGGGAGATCACAGA...GGCAGCAGCATGGACATCATGGCCTCTCAGGTCCCTTTTGGTTCTCAGTTTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CCA 90 bp AGGAATTGGCTTTGGGGCATCAGACAAGGGAGTGTGAGTGTGAGTGTGTGTGTGTCTGTGATCTCCCCATaGGACCGGGAAATCCCCTTG +
Preference number: 4 (lower is better)
Translates to: RNWLWGIRQGSVSVSVCVSVISP*DREIPL
Trigger: CAAGGGGATTTCCCGGTCCCATGGGGAGATCACAGA...CACACACACACTCACACTCACACTCCCTTGTCTGATGCCCCAAAGCCAATTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CCA 90 bp GTTCCTCCAAAACCACTTTCAGGGGATAAATTCAGCCACTGCTTCCGAACAGGAAGGATGCGTGCCACATaGTCTCCCTGTTGCCGGCTC +
Preference number: 4 (lower is better)
Translates to: VPPKPLSGDKFSHCFRTGRMRAT*SPCCRL
Trigger: GAGCCGGCAACAGGGAGACCATGTGGCACGCATCCT...TCCTGTTCGGAAGCAGTGGCTGAATTTATCCCCTGAAAGTGGTTTTGGAGGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CCA 90 bp CTGAGAACCAAAAGGGACCTGAGAGGCCATGATGTCCATGCTGCTGCCTCTGTGCCTCATCCTCTGTGGTaGCATCCTCATTCCACTTCT +
Preference number: 4 (lower is better)
Translates to: LRTKRDLRGHDVHAAASVPHPLW*HPHSTS
Trigger: AGAAGTGGAATGAGGATGCCACCACAGAGGATGAGG...CACAGAGGCAGCAGCATGGACATCATGGCCTCTCAGGTCCCTTTTGGTTCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000546443.5
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CCA 90 bp AAGAGGGAAAGCATTTCAGTTGTAGCCAGATGGATGCTGGATCCCAGTCTTCTCCAGGGCCCCCAGTGCTaGTTTCTGACAGGGTACCCA +
Preference number: 4 (lower is better)
Translates to: KRESISVVARWMLDPSLLQGPQC*FLTGYP
Trigger: TGGGTACCCTGTCAGAAACCAGCACTGGGGGCCCTG...GAGAAGACTGGGATCCAGCATCCATCTGGCTACAACTGAAATGCTTTCCCTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548263.5
CDS-3UTR CCA 90 bp AGAGAGGGTAGGGTGCCCCAGGAATTGGCTTTGGGGCATCAGACAAGGGAGTGTAGTGTGTGTGTGCAGTaGCTGTGTATCAGAAGCAAC +
Preference number: 4 (lower is better)
Translates to: REGRVPQELALGHQTRECSVCVQ*LCIRSN
Trigger: GTTGCTTCTGATACACAGCCACTGCACACACACACT...ACACTCCCTTGTCTGATGCCCCAAAGCCAATTCCTGGGGCACCCTACCCTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000546443.5
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CCA 90 bp GGTACAGTGATGGCTGCTATGAAGGGTGAAGTTCTCGGCAGTGGGAAACTTGTCGGGTGCCCCAGGAATTaGCTTTGGGGCATCAGACAA +
Preference number: 4 (lower is better)
Translates to: GTVMAAMKGEVLGSGKLVGCPRN*LWGIRQ
Trigger: TTGTCTGATGCCCCAAAGCCAATTCCTGGGGCACCC...GACAAGTTTCCCACTGCCGAGAACTTCACCCTTCATAGCAGCCATCACTGTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR CCA 90 bp ACGATTCTATTCCCACAGGGGAAGGCCTCCTCCATCCCGGTTCCTCCAAAACCAGGGCACAGAAGTCAATaGGGGAACAGAAAGAGGAAC +
Preference number: 4 (lower is better)
Translates to: TILFPQGKASSIPVPPKPGHRSQ*GNRKRN
Trigger: GTTCCTCTTTCTGTTCCCCCATTGACTTCTGTGCCC...TGGTTTTGGAGGAACCGGGATGGAGGAGGCCTTCCCCTGTGGGAATAGAATCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000546443.5
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CCA 90 bp ATAAATTCAGCCACTGCTTCCGAACAGGACCCCTCCCTGGGACAAAAGAGCCAGTGGAAAAGGCTAGGGTaGGGCACAGAAGTCAATGGG +
Preference number: 4 (lower is better)
Translates to: INSATASEQDPSLGQKSQWKRLG*GTEVNG
Trigger: CCCATTGACTTCTGTGCCCCACCCTAGCCTTTTCCA...CTGGCTCTTTTGTCCCAGGGAGGGGTCCTGTTCGGAAGCAGTGGCTGAATTTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000546443.5
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CCA 90 bp AGGGTGCCCCAGGAATTGGCTTTGGGGCATCAGACAAGGGAGTGTGAGTGTGAGGAATACCTAAGGTTATaGAAAAGGCTAGGGTGGGGC +
Preference number: 4 (lower is better)
Translates to: RVPQELALGHQTRECECEEYLRL*KRLGWG
Trigger: GCCCCACCCTAGCCTTTTCCATAACCTTAGGTATTC...CTCACACTCACACTCCCTTGTCTGATGCCCCAAAGCCAATTCCTGGGGCACCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000546443.5
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CCA 90 bp GCCCATTCAGATCTATCGGCTTTTGCATGGATGCTGGGGAGCAGGGAGGAAAGGCAGTGTCTGTATCAGTaGCCTTGTGCAGCTAGCCAT +
Preference number: 4 (lower is better)
Translates to: AHSDLSAFAWMLGSREERQCLYQ*PCAASH
Trigger: ATGGCTAGCTGCACAAGGCCACTGATACAGACACTG...CCTTTCCTCCCTGCTCCCCAGCATCCATGCAAAAGCCGATAGATCTGAATGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR CCA 90 bp TGCAGTGGCTGTGTATCAGAAGCAACCAGGGCTAGGAGTGGACGATTCTATTCCCTATCGGCTTTTGCATaGATGCTGGGGAGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: CSGCVSEATRARSGRFYSLSAFA*MLGSRE
Trigger: CTCCCTGCTCCCCAGCATCCATGCAAAAGCCGATAG...GGAATAGAATCGTCCACTCCTAGCCCTGGTTGCTTCTGATACACAGCCACTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR CCA 90 bp CAGAAGCAACCAGGGCTAGGAGTGGACGATTCTATTCCCACAGGGGAAGGCCTCCCTGTAGGTAACAGGTaGCCATTGAGGTTCGATAAG +
Preference number: 4 (lower is better)
Translates to: QKQPGLGVDDSIPTGEGLPVGNR*PLRFDK
Trigger: CTTATCGAACCTCAATGGCCACCTGTTACCTACAGG...GAGGCCTTCCCCTGTGGGAATAGAATCGTCCACTCCTAGCCCTGGTTGCTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR CCA 90 bp ACTTGTCCCACTTTTCCATGGCATGCACCCACCCTGGGACTAAACCCTGAGCAGAGGGTAGATGGGAAATaGAAGGGCAAGTTGGGACAG +
Preference number: 4 (lower is better)
Translates to: TCPTFPWHAPTLGLNPEQRVDGK*KGKLGQ
Trigger: CTGTCCCAACTTGCCCTTCCATTTCCCATCTACCCT...CTGCTCAGGGTTTAGTCCCAGGGTGGGTGCATGCCATGGAAAAGTGGGACAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR CCA 90 bp ACCCACTCATGGCCAGCACACCAGGAGGCACGACAGGACAGTAACTGCCCAGCAATGGTTCTGTTATACTaGAGTACAGGGTTCCTTAGG +
Preference number: 4 (lower is better)
Translates to: THSWPAHQEARQDSNCPAMVLLY*STGFLR
Trigger: CCTAAGGAACCCTGTACTCCAGTATAACAGAACCAT...TGCTGGGCAGTTACTGTCCTGTCGTGCCTCCTGGTGTGCTGGCCATGAGTGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR CCA 90 bp TTGGGGCATCAGACAAGGGAGTGTGAGTGTGAGTGTGTGTGTGCAGTGGCTGTGTTCATCCATGGGCCTTaGCTCTTGGAACTGGACACT +
Preference number: 4 (lower is better)
Translates to: LGHQTRECECECVCAVAVFIHGP*LLELDT
Trigger: AGTGTCCAGTTCCAAGAGCCAAGGCCCATGGATGAA...CACAGCCACTGCACACACACACTCACACTCACACTCCCTTGTCTGATGCCCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430117.6
CDS-3UTR CCA 90 bp TCCATCCCGGTTCCTCCAAAACCACTTTCAGGGGATAAATTCAGCCACTGCTTCCCCTCCTGGCCTTGCTaGTTGAACTCACCTGGCCAT +
Preference number: 4 (lower is better)
Translates to: SIPVPPKPLSGDKFSHCFPSWPC*LNSPGH
Trigger: ATGGCCAGGTGAGTTCAACCAGCAAGGCCAGGAGGG...GAAGCAGTGGCTGAATTTATCCCCTGAAAGTGGTTTTGGAGGAACCGGGATGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000548263.5
CDS-3UTR CCA 90 bp TCCATCCCGGTTCCTCCAAAACCACTTTCAGGGGATAAATTCAGCCACTGCTTCCTCCCACCTCCCTCCTaGCCTTGCTGGTTGAACTCA +
Preference number: 4 (lower is better)
Translates to: SIPVPPKPLSGDKFSHCFLPPPS*PCWLNS
Trigger: TGAGTTCAACCAGCAAGGCCAGGAGGGAGGTGGGAG...GAAGCAGTGGCTGAATTTATCCCCTGAAAGTGGTTTTGGAGGAACCGGGATGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548263.5
3UTR CAA 72 bp CAAATAAGAGAGGGTAGGGTGCCCCAGGAATTGGCTTaGGGGCATCAGACAAGGGAGTGTGAGTGTGAGTGT +
Preference number: 4 (lower is better)
Translates to: QIREGRVPQELA*GHQTRECECEC
Trigger: ACACTCACACTCACACTCCCTTGTCTGATGCCCCAAAGCCAATTCCTGGGGCACCCTACCCTCTCTTATTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000546443.5
ENST00000548263.5
ENST00000550804.6
3UTR CAA 72 bp GTAGGCATGTGCTTGTGCAGGCCATTGCTGAGAGCCTaGGTGAGCGTGCAGGTCCTTAACAAATGCTTTACG +
Preference number: 4 (lower is better)
Translates to: VGMCLCRPLLRA*VSVQVLNKCFT
Trigger: CGTAAAGCATTTGTTAAGGACCTGCACGCTCACCAAGGCTCTCAGCAATGGCCTGCACAAGCACATGCCTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR TCA 90 bp AAACTGAGAACCAAAAGGGACCTGAGAGGCCATGATGTCCATGCTGCTGCCTCTCTTCCATCCTGGCCTTaGGATATCTGTCCTCCCAAC +
Preference number: 4 (lower is better)
Translates to: KLRTKRDLRGHDVHAAASLPSWP*DICPPN
Trigger: GTTGGGAGGACAGATATCTCAAGGCCAGGATGGAAG...AGAGGCAGCAGCATGGACATCATGGCCTCTCAGGTCCCTTTTGGTTCTCAGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR TCA 90 bp ATAAATTCAGCCACTGCTTCCGAACAGGACCCCTCCCTGGGACAAAAGAGCCAGAACTGGACACTGGTGTaGATGGGGGAACCATCAGTT +
Preference number: 4 (lower is better)
Translates to: INSATASEQDPSLGQKSQNWTLV*MGEPSV
Trigger: AACTGATGGTTCCCCCATTCACACCAGTGTCCAGTT...CTGGCTCTTTTGTCCCAGGGAGGGGTCCTGTTCGGAAGCAGTGGCTGAATTTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR TCA 90 bp CCTGCCCTGAGCCCATCTCACATCCAGGCAAAACCGGGACTAGATGATCAAATCAACTGGACACTGGTGTaGATGGGGGAACCATCAGTT +
Preference number: 4 (lower is better)
Translates to: PALSPSHIQAKPGLDDQINWTLV*MGEPSV
Trigger: AACTGATGGTTCCCCCATTCACACCAGTGTCCAGTT...GATTTGATCATCTAGTCCCGGTTTTGCCTGGATGTGAGATGGGCTCAGGGCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000548263.5
CDS-3UTR TCA 90 bp TCAGAAGCAACCAGGGCTAGGAGTGGACGATTCTATTCCCACAGGGGAAGGCCTTCAGCACTTTCTCACTaGTGGTCTGGATGTCATCCT +
Preference number: 4 (lower is better)
Translates to: SEATRARSGRFYSHRGRPSALSH*WSGCHP
Trigger: AGGATGACATCCAGACCATCAGTGAGAAAGTGCTGA...AGGCCTTCCCCTGTGGGAATAGAATCGTCCACTCCTAGCCCTGGTTGCTTCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR TCA 90 bp ATCCCGGTTCCTCCAAAACCACTTTCAGGGGATAAATTCAGCCACTGCTTCCGATGGGTCCTCTCCTCCTaGACTGCCTTCTCCAATCGA +
Preference number: 4 (lower is better)
Translates to: IPVPPKPLSGDKFSHCFRWVLSS*TAFSNR
Trigger: TCGATTGGAGAAGGCAGTTCAGGAGGAGAGGACCCA...TCGGAAGCAGTGGCTGAATTTATCCCCTGAAAGTGGTTTTGGAGGAACCGGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR TCA 90 bp GGTACAGTGATGGCTGCTATGAAGGGTGAAGTTCTCGGCAGTGGGAAACTTGTCAGCTGCCATCAGGACTaGCTTCTCATCTTCAGCCGA +
Preference number: 4 (lower is better)
Translates to: GTVMAAMKGEVLGSGKLVSCHQD*LLIFSR
Trigger: TCGGCTGAAGATGAGAAGTCAGTCCTGATGGCAGCT...GACAAGTTTCCCACTGCCGAGAACTTCACCCTTCATAGCAGCCATCACTGTACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262059.8
CDS-3UTR TCA 90 bp AAACTGAGAACCAAAAGGGACCTGAGAGGCCATGATGTCCATGCTGCTGCCTCTCCCAGTGCTGGTTTCTaGCAGGGTACCCACTGTAAA +
Preference number: 4 (lower is better)
Translates to: KLRTKRDLRGHDVHAAASPSAGF*QGTHCK
Trigger: TTTACAGTGGGTACCCTGTCAGAAACCAGCACTGGG...AGAGGCAGCAGCATGGACATCATGGCCTCTCAGGTCCCTTTTGGTTCTCAGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000546443.5
ENST00000548263.5
ENST00000550804.6
CDS-3UTR TCA 90 bp GAGCCCCCTCTGTGTCGGGGACCATGCTTTGGATACTGGGATAGGCAAACCATGTTATTTCTTTCCATGTaGGGAGATGCGAGGAGAGGA +
Preference number: 4 (lower is better)
Translates to: EPPLCRGPCFGYWDRQTMLFLSM*GDARRG
Trigger: TCCTCTCCTCGCATCTCCTCACATGGAAAGAAATAA...CATGGTTTGCCTATCCCAGTATCCAAAGCATGGTCCCCGACACAGAGGGGGCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR TCA 90 bp AAAACTCAGGTAAACCAACGGAAACTCCAAATAAGAGAGGGTAGGGTGCCCCAGAGCCAGACTCCCACTTaGGACAACCCACTCATGGCC +
Preference number: 4 (lower is better)
Translates to: KTQVNQRKLQIREGRVPQSQTPT*DNPLMA
Trigger: GGCCATGAGTGGGTTGTCTCAAGTGGGAGTCTGGCT...CTGGGGCACCCTACCCTCTCTTATTTGGAGTTTCCGTTGGTTTACCTGAGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR TCA 90 bp GGTACAGTGATGGCTGCTATGAAGGGTGAAGTTCTCGGCAGTGGGAAACTTGTCAACCCTGAGCAGAAGTaGCAGGGACCCATGAGTTTG +
Preference number: 4 (lower is better)
Translates to: GTVMAAMKGEVLGSGKLVNPEQK*QGPMSL
Trigger: CAAACTCATGGGTCCCTGTCACTTCTGCTCAGGGTT...GACAAGTTTCCCACTGCCGAGAACTTCACCCTTCATAGCAGCCATCACTGTACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR TCA 90 bp GTATCAGAAGCAACCAGGGCTAGGAGTGGACGATTCTATTCCCACAGGGGAAGGTGTCTGTCTAGCCTGTaGAGCTGGTTAGAGTGGATG +
Preference number: 4 (lower is better)
Translates to: VSEATRARSGRFYSHRGRCLSSL*SWLEWM
Trigger: CATCCACTCTAACCAGCTTCACAGGCTAGACAGACA...CCTTCCCCTGTGGGAATAGAATCGTCCACTCCTAGCCCTGGTTGCTTCTGATAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR TCA 90 bp AGGGTGCCCCAGGAATTGGCTTTGGGGCATCAGACAAGGGAGTGTGAGTGTGAGTTCACCACCAAATACTaGCGCGAGTTCCTATTTGCT +
Preference number: 4 (lower is better)
Translates to: RVPQELALGHQTRECECEFTTKY*REFLFA
Trigger: AGCAAATAGGAACTCGCGTCAGTATTTGGTGGTGAA...CTCACACTCACACTCCCTTGTCTGATGCCCCAAAGCCAATTCCTGGGGCACCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR TCA 90 bp CTCCAAAACCACTTTCAGGGGATAAATTCAGCCACTGCTTCCGAACAGGACCCCGTAACAGGTGGCCATTaGGGTTCGATAAGTGGGGGA +
Preference number: 4 (lower is better)
Translates to: LQNHFQGINSATASEQDPVTGGH*GSISGG
Trigger: TCCCCCACTTATCGAACCTCAATGGCCACCTGTTAC...GGGGTCCTGTTCGGAAGCAGTGGCTGAATTTATCCCCTGAAAGTGGTTTTGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR TCA 90 bp AGGAATTGGCTTTGGGGCATCAGACAAGGGAGTGTGAGTGTGAGTGTGTGTGTGAGCTGCCATCAGGACTaGCTTCTCATCTTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: RNWLWGIRQGSVSVSVCVSCHQD*LLIFSL
Trigger: GAGGCTGAAGATGAGAAGTCAGTCCTGATGGCAGCT...CACACACACACTCACACTCACACTCCCTTGTCTGATGCCCCAAAGCCAATTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430117.6
ENST00000546443.5
ENST00000548263.5
ENST00000550804.6
CDS-3UTR TCA 90 bp CTCAAAGGTGAAGGGGTCCTGGGTGCTGAAAAAGAAGTGTCCATCCATGTGGTCAGCTGCCATCAGGACTaGCTTCTCATCTTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: LKGEGVLGAEKEVSIHVVSCHQD*LLIFSL
Trigger: GAGGCTGAAGATGAGAAGTCAGTCCTGATGGCAGCT...GACCACATGGATGGACACTTCTTTTTCAGCACCCAGGACCCCTTCACCTTTGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000548263.5
CDS-3UTR TCA 90 bp TGTGTATCAGAAGCAACCAGGGCTAGGAGTGGACGATTCTATTCCCACAGGGGAAGCTGCCATCAGGACTaGCTTCTCATCTTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: CVSEATRARSGRFYSHRGSCHQD*LLIFSL
Trigger: GAGGCTGAAGATGAGAAGTCAGTCCTGATGGCAGCT...TCCCCTGTGGGAATAGAATCGTCCACTCCTAGCCCTGGTTGCTTCTGATACACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430117.6
ENST00000546443.5
ENST00000548263.5
ENST00000550804.6
CDS-3UTR TCA 90 bp TTTCAGGGGATAAATTCAGCCACTGCTTCCGAACAGGACCCCTCCCTGGGACAAGGACAATCTGATACCTaGAACCCCCACCTCTATAGG +
Preference number: 4 (lower is better)
Translates to: FQGINSATASEQDPSLGQGQSDT*NPHLYR
Trigger: CCTATAGAGGTGGGGGTTTCAGGTATCAGATTGTCC...TTGTCCCAGGGAGGGGTCCTGTTCGGAAGCAGTGGCTGAATTTATCCCCTGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000548263.5
CDS-3UTR GCA 90 bp TCAGAAGCAACCAGGGCTAGGAGTGGACGATTCTATTCCCACAGGGGAAGGCCTAGCTGTAGCTTCAGCTaGATCAGGTCATTCCGTTCT +
Preference number: 4 (lower is better)
Translates to: SEATRARSGRFYSHRGRPSCSFS*IRSFRS
Trigger: AGAACGGAATGACCTGATGCAGCTGAAGCTACAGCT...AGGCCTTCCCCTGTGGGAATAGAATCGTCCACTCCTAGCCCTGGTTGCTTCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR GCA 90 bp ACGATTCTATTCCCACAGGGGAAGGCCTCCTCCATCCCGGTTCCTCCAAAACCAAGCTGTAGCTTCAGCTaGATCAGGTCATTCCGTTCT +
Preference number: 4 (lower is better)
Translates to: TILFPQGKASSIPVPPKPSCSFS*IRSFRS
Trigger: AGAACGGAATGACCTGATGCAGCTGAAGCTACAGCT...TGGTTTTGGAGGAACCGGGATGGAGGAGGCCTTCCCCTGTGGGAATAGAATCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR GCA 90 bp TTGGGGCATCAGACAAGGGAGTGTGAGTGTGAGTGTGTGTGTGCAGTGGCTGTGAGCTGTAGCTTCAGCTaGATCAGGTCATTCCGTTCT +
Preference number: 4 (lower is better)
Translates to: LGHQTRECECECVCAVAVSCSFS*IRSFRS
Trigger: AGAACGGAATGACCTGATGCAGCTGAAGCTACAGCT...CACAGCCACTGCACACACACACTCACACTCACACTCCCTTGTCTGATGCCCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR GCA 90 bp AAAACTCAGGTAAACCAACGGAAACTCCAAATAAGAGAGGGTAGGGTGCCCCAGGCACTCTGCTCCTCTTaGCAGCTCTTCGCCTCCTTC +
Preference number: 4 (lower is better)
Translates to: KTQVNQRKLQIREGRVPQALCSS*QLFASF
Trigger: GAAGGAGGCGAAGAGCTGGCAAGAGGAGCAGAGTGC...CTGGGGCACCCTACCCTCTCTTATTTGGAGTTTCCGTTGGTTTACCTGAGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262059.8
ENST00000548263.5
ENST00000550804.6
CDS-3UTR GCA 90 bp TGTGTGAGTGTGTGTGTGCATGAGTGTGTATTTGTGCATGTACGAGGGAGTAAGGTAGTTCGGCTATGGTaGGGTCCCTGGCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: CVSVCVHECVFVHVRGSKVVRLW*GPWLLL
Trigger: CAGCAGCAGCCAGGGACCGCACCATAGCCGAACTAC...CTTACTCCCTCGTACATGCACAAATACACACTCATGCACACACACACTCACACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR GCA 90 bp TTGAGCCCCCTCTGTGTCGGGGACCATGCTTTGGATACTGGGATAGGCAAACCATTTTCTTCCTTCAAGTaGAAACCGAGCTCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: LSPLCVGDHALDTGIGKPFSSFK*KPSSAS
Trigger: GCTGGCTGAGCTCGGTTTGCACTTGAAGGAAGAAAA...TGGTTTGCCTATCCCAGTATCCAAAGCATGGTCCCCGACACAGAGGGGGCTCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR GCA 90 bp ATGAAACTGAGAACCAAAAGGGACCTGAGAGGCCATGATGTCCATGCTGCTGCCGCCCTGCCCGCTCCTTaGTCCATTGGCATTTTTCTT +
Preference number: 4 (lower is better)
Translates to: MKLRTKRDLRGHDVHAAAALPAP*SIGIFL
Trigger: AAGAAAAATGCCAATGGAGCAAGGAGCGGGCAGGGC...GGCAGCAGCATGGACATCATGGCCTCTCAGGTCCCTTTTGGTTCTCAGTTTCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR GCA 90 bp TGTGTATCAGAAGCAACCAGGGCTAGGAGTGGACGATTCTATTCCCACAGGGGAGCCCTGCCCGCTCCTTaGTCCATTGGCATTTTTCTT +
Preference number: 4 (lower is better)
Translates to: CVSEATRARSGRFYSHRGALPAP*SIGIFL
Trigger: AAGAAAAATGCCAATGGAGCAAGGAGCGGGCAGGGC...TCCCCTGTGGGAATAGAATCGTCCACTCCTAGCCCTGGTTGCTTCTGATACACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR GCA 90 bp ATCCCGGTTCCTCCAAAACCACTTTCAGGGGATAAATTCAGCCACTGCTTCCGAATTCCACTTCTCATCTaGCACCTTCTCCAGGCGGGC +
Preference number: 4 (lower is better)
Translates to: IPVPPKPLSGDKFSHCFRIPLLI*HLLQAG
Trigger: GCCCGCCTGGAGAAGGTGGCAGATGAGAAGTGGAAT...TCGGAAGCAGTGGCTGAATTTATCCCCTGAAAGTGGTTTTGGAGGAACCGGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000546443.5
ENST00000548263.5
ENST00000550804.6
CDS-3UTR GCA 90 bp TTGGGGCATCAGACAAGGGAGTGTGAGTGTGAGTGTGTGTGTGCAGTGGCTGTGCGAGTTCCTATTTGCTaGTACTTGGCTGACATCTCC +
Preference number: 4 (lower is better)
Translates to: LGHQTRECECECVCAVAVRVPIC*YLADIS
Trigger: GGAGATGTCAGCCAAGTAGCAGCAAATAGGAACTCG...CACAGCCACTGCACACACACACTCACACTCACACTCCCTTGTCTGATGCCCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR CCA 90 bp AAAACTCAGGTAAACCAACGGAAACTCCAAATAAGAGAGGGTAGGGTGCCCCAGTGCCAATCCAGTCACTaGCACTGGGCATGGTGCCTG +
Preference number: 4 (lower is better)
Translates to: KTQVNQRKLQIREGRVPQCQSSH*HWAWCL
Trigger: CAGGCACCATGCCCAGTGCCAGTGACTGGATTGGCA...CTGGGGCACCCTACCCTCTCTTATTTGGAGTTTCCGTTGGTTTACCTGAGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CCA 90 bp TTTCAGGGGATAAATTCAGCCACTGCTTCCGAACAGGACCCCTCCCTGGGACAAGGACACTGGTGTGAATaGGGGAACCATCAGTTGTAC +
Preference number: 4 (lower is better)
Translates to: FQGINSATASEQDPSLGQGHWCE*GNHQLY
Trigger: GTACAACTGATGGTTCCCCCATTCACACCAGTGTCC...TTGTCCCAGGGAGGGGTCCTGTTCGGAAGCAGTGGCTGAATTTATCCCCTGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CCA 90 bp GTATCAGAAGCAACCAGGGCTAGGAGTGGACGATTCTATTCCCACAGGGGAAGGGGACACTGGTGTGAATaGGGGAACCATCAGTTGTAC +
Preference number: 4 (lower is better)
Translates to: VSEATRARSGRFYSHRGRGHWCE*GNHQLY
Trigger: GTACAACTGATGGTTCCCCCATTCACACCAGTGTCC...CCTTCCCCTGTGGGAATAGAATCGTCCACTCCTAGCCCTGGTTGCTTCTGATAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CCA 90 bp TCACTCTCAGCAGGAAAGCGCTCCTTACAGATAGGACACTCCTTCCATGTGGGGCTTGGAACTGGACACTaGTGTGAATGGGGGAACCAT +
Preference number: 4 (lower is better)
Translates to: SLSAGKRSLQIGHSFHVGLGTGH*CEWGNH
Trigger: ATGGTTCCCCCATTCACACCAGTGTCCAGTTCCAAG...CCCCACATGGAAGGAGTGTCCTATCTGTAAGGAGCGCTTTCCTGCTGAGAGTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000548263.5
CDS-3UTR CCA 90 bp ATCCCGGTTCCTCCAAAACCACTTTCAGGGGATAAATTCAGCCACTGCTTCCGAGTTTGGGCAGGTAGCTaGCTTGGAACTGGACACTGG +
Preference number: 4 (lower is better)
Translates to: IPVPPKPLSGDKFSHCFRVWAGS*LGTGHW
Trigger: CCAGTGTCCAGTTCCAAGCCAGCTACCTGCCCAAAC...TCGGAAGCAGTGGCTGAATTTATCCCCTGAAAGTGGTTTTGGAGGAACCGGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262059.8
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CCA 90 bp AAAACTCAGGTAAACCAACGGAAACTCCAAATAAGAGAGGGTAGGGTGCCCCAGGCTGAGCTCCTGGTTTaGGCAGGTAGCTGGCTTGGA +
Preference number: 4 (lower is better)
Translates to: KTQVNQRKLQIREGRVPQAELLV*AGSWLG
Trigger: TCCAAGCCAGCTACCTGCCCAAACCAGGAGCTCAGC...CTGGGGCACCCTACCCTCTCTTATTTGGAGTTTCCGTTGGTTTACCTGAGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262059.8
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CCA 90 bp TGTGTATCAGAAGCAACCAGGGCTAGGAGTGGACGATTCTATTCCCACAGGGGATCACCAGTTCATCCATaGGCCTTGGCTCTCGGAACT +
Preference number: 4 (lower is better)
Translates to: CVSEATRARSGRFYSHRGSPVHP*ALALGT
Trigger: AGTTCCGAGAGCCAAGGCCCATGGATGAACTGGTGA...TCCCCTGTGGGAATAGAATCGTCCACTCCTAGCCCTGGTTGCTTCTGATACACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262059.8
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CCA 90 bp CAGAAAGAGGAACCAATGAAACTGAGAACCAAAAGGGACCTGAGAGGCCATGATAGGATGCGTGCCACATaGTCTCCCTGTTGCCGGCTC +
Preference number: 4 (lower is better)
Translates to: QKEEPMKLRTKRDLRGHDRMRAT*SPCCRL
Trigger: GAGCCGGCAACAGGGAGACCATGTGGCACGCATCCT...ATCATGGCCTCTCAGGTCCCTTTTGGTTCTCAGTTTCATTGGTTCCTCTTTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CCA 90 bp ACGATTCTATTCCCACAGGGGAAGGCCTCCTCCATCCCGGTTCCTCCAAAACCATTCTCACTGATGGTCTaGATGTCATCCTCTAGCTCC +
Preference number: 4 (lower is better)
Translates to: TILFPQGKASSIPVPPKPFSLMV*MSSSSS
Trigger: GGAGCTAGAGGATGACATCCAGACCATCAGTGAGAA...TGGTTTTGGAGGAACCGGGATGGAGGAGGCCTTCCCCTGTGGGAATAGAATCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CCA 90 bp TCAGAAGCAACCAGGGCTAGGAGTGGACGATTCTATTCCCACAGGGGAAGGCCTTTCTCACTGATGGTCTaGATGTCATCCTCTAGCTCC +
Preference number: 4 (lower is better)
Translates to: SEATRARSGRFYSHRGRPFSLMV*MSSSSS
Trigger: GGAGCTAGAGGATGACATCCAGACCATCAGTGAGAA...AGGCCTTCCCCTGTGGGAATAGAATCGTCCACTCCTAGCCCTGGTTGCTTCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CCA 90 bp TTGAGCCCCCTCTGTGTCGGGGACCATGCTTTGGATACTGGGATAGGCAAACCATTCTCACTGATGGTCTaGATGTCATCCTCTAGCTCC +
Preference number: 4 (lower is better)
Translates to: LSPLCVGDHALDTGIGKPFSLMV*MSSSSS
Trigger: GGAGCTAGAGGATGACATCCAGACCATCAGTGAGAA...TGGTTTGCCTATCCCAGTATCCAAAGCATGGTCCCCGACACAGAGGGGGCTCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR CCA 90 bp CCTGCCCTGAGCCCATCTCACATCCAGGCAAAACCGGGACTAGATGATCAAATCAGGGTGTCCTTCATCTaGGCCACCTTGTCTTTCAGT +
Preference number: 4 (lower is better)
Translates to: PALSPSHIQAKPGLDDQIRVSFI*ATLSFS
Trigger: ACTGAAAGACAAGGTGGCCCAGATGAAGGACACCCT...GATTTGATCATCTAGTCCCGGTTTTGCCTGGATGTGAGATGGGCTCAGGGCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548263.5
CDS-3UTR CCA 90 bp AGTGGGGGAGTGGTGTGTTTGGATTCGTTCTTTCACCACCAAATACTGACGCGATGCTCCTTTTCCTTCTaGAGCACACGCAGGGCTGAC +
Preference number: 4 (lower is better)
Translates to: SGGVVCLDSFFHHQILTRCSFSF*STRRAD
Trigger: GTCAGCCCTGCGTGTGCTCCAGAAGGAAAAGGAGCA...TCGCGTCAGTATTTGGTGGTGAAAGAACGAATCCAAACACACCACTCCCCCACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR CCA 90 bp AAAACTCAGGTAAACCAACGGAAACTCCAAATAAGAGAGGGTAGGGTGCCCCAGAGCAGGAGAGGAGCCTaGGTCTCCACGCTCACAAAG +
Preference number: 4 (lower is better)
Translates to: KTQVNQRKLQIREGRVPQSRRGA*VSTLTK
Trigger: CTTTGTGAGCGTGGAGACCCAGGCTCCTCTCCTGCT...CTGGGGCACCCTACCCTCTCTTATTTGGAGTTTCCGTTGGTTTACCTGAGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000546443.5
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CCA 90 bp ATTATTTCTTTCCATGTGAGGAGATGCGAGGAGAGGATACAGAATACAGGAATCCCTTCCATGTGGGGGTaGCAGGGCCCCCAGTGCTGG +
Preference number: 4 (lower is better)
Translates to: IISFHVRRCEERIQNTGIPSMWG*QGPQCW
Trigger: CCAGCACTGGGGGCCCTGCCACCCCCACATGGAAGG...GATTCCTGTATTCTGTATCCTCTCCTCGCATCTCCTCACATGGAAAGAAATAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000546443.5
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CCA 90 bp TGTGTATCAGAAGCAACCAGGGCTAGGAGTGGACGATTCTATTCCCACAGGGGACCCAGGAATTGGCTTTaGGGCATCAGACAAGGGAGT +
Preference number: 4 (lower is better)
Translates to: CVSEATRARSGRFYSHRGPRNWL*GIRQGS
Trigger: ACTCCCTTGTCTGATGCCCCAAAGCCAATTCCTGGG...TCCCCTGTGGGAATAGAATCGTCCACTCCTAGCCCTGGTTGCTTCTGATACACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000546443.5
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CCA 90 bp AGGAATTGGCTTTGGGGCATCAGACAAGGGAGTGTGAGTGTGAGTGTGTGTGTGCCCAGGAATTGGCTTTaGGGCATCAGACAAGGGAGT +
Preference number: 4 (lower is better)
Translates to: RNWLWGIRQGSVSVSVCVPRNWL*GIRQGS
Trigger: ACTCCCTTGTCTGATGCCCCAAAGCCAATTCCTGGG...CACACACACACTCACACTCACACTCCCTTGTCTGATGCCCCAAAGCCAATTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000546443.5
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CCA 90 bp AAACTGAGAACCAAAAGGGACCTGAGAGGCCATGATGTCCATGCTGCTGCCTCTAAGCTTTTATTGCTGTaGGGGGACCTGGAGAGGGAG +
Preference number: 4 (lower is better)
Translates to: KLRTKRDLRGHDVHAAASKLLLL*GDLERE
Trigger: CTCCCTCTCCAGGTCCCCCCACAGCAATAAAAGCTT...AGAGGCAGCAGCATGGACATCATGGCCTCTCAGGTCCCTTTTGGTTCTCAGTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000546443.5
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CCA 90 bp ACCAGGGCTAGGAGTGGACGATTCTATTCCCACAGGGGAAGGCCTCCTCCATCCCAAACTACAAAGGGATaGATATCAGGGGGAAGCTTT +
Preference number: 4 (lower is better)
Translates to: TRARSGRFYSHRGRPPPSQTTKG*ISGGSF
Trigger: AAAGCTTCCCCCTGATATCCATCCCTTTGTAGTTTG...GGATGGAGGAGGCCTTCCCCTGTGGGAATAGAATCGTCCACTCCTAGCCCTGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000546443.5
ENST00000550804.6
CDS-3UTR CCA 90 bp AGTGGGGGAGTGGTGTGTTTGGATTCGTTCTTTCACCACCAAATACTGACGCGATGTCCCACTTTTCCATaGCATGCACCCACCCTGGGA +
Preference number: 4 (lower is better)
Translates to: SGGVVCLDSFFHHQILTRCPTFP*HAPTLG
Trigger: TCCCAGGGTGGGTGCATGCCATGGAAAAGTGGGACA...TCGCGTCAGTATTTGGTGGTGAAAGAACGAATCCAAACACACCACTCCCCCACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR CCA 90 bp TGCAGTGGCTGTGTATCAGAAGCAACCAGGGCTAGGAGTGGACGATTCTATTCCAATGGAGAAAGGGAATaGTGGGGGTGGTCCACACAG +
Preference number: 4 (lower is better)
Translates to: CSGCVSEATRARSGRFYSNGERE*WGWSTQ
Trigger: CTGTGTGGACCACCCCCACCATTCCCTTTCTCCATT...GGAATAGAATCGTCCACTCCTAGCCCTGGTTGCTTCTGATACACAGCCACTGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR CCA 90 bp AAACTGAGAACCAAAAGGGACCTGAGAGGCCATGATGTCCATGCTGCTGCCTCTATGGGAGCAGGGGCCTaGGTTCCTGTTTGTCTACTA +
Preference number: 4 (lower is better)
Translates to: KLRTKRDLRGHDVHAAASMGAGA*VPVCLL
Trigger: TAGTAGACAAACAGGAACCCAGGCCCCTGCTCCCAT...AGAGGCAGCAGCATGGACATCATGGCCTCTCAGGTCCCTTTTGGTTCTCAGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR CCA 90 bp TCAGAAGCAACCAGGGCTAGGAGTGGACGATTCTATTCCCACAGGGGAAGGCCTTTGAGGTTCGATAAGTaGGGGAGTGGTGTGTTTGGA +
Preference number: 4 (lower is better)
Translates to: SEATRARSGRFYSHRGRPLRFDK*GSGVFG
Trigger: TCCAAACACACCACTCCCCCACTTATCGAACCTCAA...AGGCCTTCCCCTGTGGGAATAGAATCGTCCACTCCTAGCCCTGGTTGCTTCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR CCA 90 bp CTGAGAACCAAAAGGGACCTGAGAGGCCATGATGTCCATGCTGCTGCCTCTGTGCCTGTAGGTAACAGGTaGCCATTGAGGTTCGATAAG +
Preference number: 4 (lower is better)
Translates to: LRTKRDLRGHDVHAAASVPVGNR*PLRFDK
Trigger: CTTATCGAACCTCAATGGCCACCTGTTACCTACAGG...CACAGAGGCAGCAGCATGGACATCATGGCCTCTCAGGTCCCTTTTGGTTCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR CCA 90 bp TTGGGGCATCAGACAAGGGAGTGTGAGTGTGAGTGTGTGTGTGCAGTGGCTGTGGGTGAAGACCCTGACTaGCACACTAAGCAATCTACA +
Preference number: 4 (lower is better)
Translates to: LGHQTRECECECVCAVAVGEDPD*HTKQST
Trigger: TGTAGATTGCTTAGTGTGCCAGTCAGGGTCTTCACC...CACAGCCACTGCACACACACACTCACACTCACACTCCCTTGTCTGATGCCCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR CCA 90 bp GTATCAGAAGCAACCAGGGCTAGGAGTGGACGATTCTATTCCCACAGGGGAAGGAGGGTAGATGGGAAATaGAAGGGCAAGTTGGGACAG +
Preference number: 4 (lower is better)
Translates to: VSEATRARSGRFYSHRGRRVDGK*KGKLGQ
Trigger: CTGTCCCAACTTGCCCTTCCATTTCCCATCTACCCT...CCTTCCCCTGTGGGAATAGAATCGTCCACTCCTAGCCCTGGTTGCTTCTGATAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR CCA 90 bp ACCAGGGCTAGGAGTGGACGATTCTATTCCCACAGGGGAAGGCCTCCTCCATCCTTCTCCCCACAATCCTaGAAGGCTTATTTTTCCAGT +
Preference number: 4 (lower is better)
Translates to: TRARSGRFYSHRGRPPPSFSPQS*KAYFSS
Trigger: ACTGGAAAAATAAGCCTTCCAGGATTGTGGGGAGAA...GGATGGAGGAGGCCTTCCCCTGTGGGAATAGAATCGTCCACTCCTAGCCCTGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000548263.5
CDS-3UTR CCA 90 bp GTATCAGAAGCAACCAGGGCTAGGAGTGGACGATTCTATTCCCACAGGGGAAGGTGCAGAAGATGGTGCTaGCCATGTCATAGAAGGCAC +
Preference number: 4 (lower is better)
Translates to: VSEATRARSGRFYSHRGRCRRWC*PCHRRH
Trigger: GTGCCTTCTATGACATGGCCAGCACCATCTTCTGCA...CCTTCCCCTGTGGGAATAGAATCGTCCACTCCTAGCCCTGGTTGCTTCTGATAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546443.5
CDS-3UTR CCA 90 bp CTCCAAAACCACTTTCAGGGGATAAATTCAGCCACTGCTTCCGAACAGGACCCCGGGCTCTGCAGAAGATaGTGCTGGCCATGTCATAGA +
Preference number: 4 (lower is better)
Translates to: LQNHFQGINSATASEQDPGLCRR*CWPCHR
Trigger: TCTATGACATGGCCAGCACCATCTTCTGCAGAGCCC...GGGGTCCTGTTCGGAAGCAGTGGCTGAATTTATCCCCTGAAAGTGGTTTTGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000546443.5
CDS-3UTR TCA 90 bp CTCCAAAACCACTTTCAGGGGATAAATTCAGCCACTGCTTCCGAACAGGACCCCCTCCCGCTTACTTTCTaGCAACTGTACCAGGCTAGA +
Preference number: 4 (lower is better)
Translates to: LQNHFQGINSATASEQDPLPLTF*QLYQAR
Trigger: TCTAGCCTGGTACAGTTGTCAGAAAGTAAGCGGGAG...GGGGTCCTGTTCGGAAGCAGTGGCTGAATTTATCCCCTGAAAGTGGTTTTGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR TCA 90 bp TGCAGTGGCTGTGTATCAGAAGCAACCAGGGCTAGGAGTGGACGATTCTATTCCCTCCCGCTTACTTTCTaGCAACTGTACCAGGCTAGA +
Preference number: 4 (lower is better)
Translates to: CSGCVSEATRARSGRFYSLPLTF*QLYQAR
Trigger: TCTAGCCTGGTACAGTTGTCAGAAAGTAAGCGGGAG...GGAATAGAATCGTCCACTCCTAGCCCTGGTTGCTTCTGATACACAGCCACTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR TCA 90 bp ATTATTTCTTTCCATGTGAGGAGATGCGAGGAGAGGATACAGAATACAGGAATCGCTGGCCCAGAGAGGTaGGGAGAAATGGGAGCCGGC +
Preference number: 4 (lower is better)
Translates to: IISFHVRRCEERIQNTGIAGPER*GEMGAG
Trigger: GCCGGCTCCCATTTCTCCTCACCTCTCTGGGCCAGC...GATTCCTGTATTCTGTATCCTCTCCTCGCATCTCCTCACATGGAAAGAAATAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000546443.5
ENST00000548263.5
ENST00000550804.6
CDS-3UTR TCA 90 bp AGGAGTGGACGATTCTATTCCCACAGGGGAAGGCCTCCTCCATCCCGGTTCCTCGATAGAAAATGGGCATaGAACCTAAGTGTATGCATG +
Preference number: 4 (lower is better)
Translates to: RSGRFYSHRGRPPPSRFLDRKWA*NLSVCM
Trigger: CATGCATACACTTAGGTTTCATGCCCATTTTCTATC...GAGGAACCGGGATGGAGGAGGCCTTCCCCTGTGGGAATAGAATCGTCCACTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000546443.5
ENST00000548263.5
ENST00000550804.6
CDS-3UTR TCA 90 bp AGGGTGCCCCAGGAATTGGCTTTGGGGCATCAGACAAGGGAGTGTGAGTGTGAGATGAATGTGTTTTTGTaGCTGTTGAGGCAGAGTGTG +
Preference number: 4 (lower is better)
Translates to: RVPQELALGHQTRECECEMNVFL*LLRQSV
Trigger: CACACTCTGCCTCAACAGTCACAAAAACACATTCAT...CTCACACTCACACTCCCTTGTCTGATGCCCCAAAGCCAATTCCTGGGGCACCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR TCA 90 bp AAACTGAGAACCAAAAGGGACCTGAGAGGCCATGATGTCCATGCTGCTGCCTCTCTCATAATTCCTCTCTaGTTAACCCCCACTACCCCG +
Preference number: 4 (lower is better)
Translates to: KLRTKRDLRGHDVHAAASLIIPL*LTPTTP
Trigger: CGGGGTAGTGGGGGTTAATCAGAGAGGAATTATGAG...AGAGGCAGCAGCATGGACATCATGGCCTCTCAGGTCCCTTTTGGTTCTCAGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR TCA 90 bp ATCCCGGTTCCTCCAAAACCACTTTCAGGGGATAAATTCAGCCACTGCTTCCGAGTAACAGGTGGCCATTaGGGTTCGATAAGTGGGGGA +
Preference number: 4 (lower is better)
Translates to: IPVPPKPLSGDKFSHCFRVTGGH*GSISGG
Trigger: TCCCCCACTTATCGAACCTCAATGGCCACCTGTTAC...TCGGAAGCAGTGGCTGAATTTATCCCCTGAAAGTGGTTTTGGAGGAACCGGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR TCA 90 bp TCCATCCCGGTTCCTCCAAAACCACTTTCAGGGGATAAATTCAGCCACTGCTTCAGCTGCCATCAGGACTaGCTTCTCATCTTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: SIPVPPKPLSGDKFSHCFSCHQD*LLIFSL
Trigger: GAGGCTGAAGATGAGAAGTCAGTCCTGATGGCAGCT...GAAGCAGTGGCTGAATTTATCCCCTGAAAGTGGTTTTGGAGGAACCGGGATGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000430117.6
ENST00000546443.5
ENST00000548263.5
ENST00000550804.6
CDS-3UTR TCA 90 bp GTCCTCCAGGGCATCCTTGTCACTCTCAGCAGGAAAGCGCTCCTTACAGATAGGAAAACCGGGACTAGATaGTCAAATCTCTCTTCCCTG +
Preference number: 4 (lower is better)
Translates to: VLQGILVTLSRKALLTDRKTGTR*SNLSSL
Trigger: CAGGGAAGAGAGATTTGATCATCTAGTCCCGGTTTT...CCTATCTGTAAGGAGCGCTTTCCTGCTGAGAGTGACAAGGATGCCCTGGAGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548263.5
CDS-3UTR GCA 90 bp ATTATTTCTTTCCATGTGAGGAGATGCGAGGAGAGGATACAGAATACAGGAATCGGTGCGGTCCCTGGCTaGTGCTGCACTGGCCAACTC +
Preference number: 4 (lower is better)
Translates to: IISFHVRRCEERIQNTGIGAVPG*CCTGQL
Trigger: GAGTTGGCCAGTGCAGCAGCAGCCAGGGACCGCACC...GATTCCTGTATTCTGTATCCTCTCCTCGCATCTCCTCACATGGAAAGAAATAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR GCA 90 bp ATAAATTCAGCCACTGCTTCCGAACAGGACCCCTCCCTGGGACAAAAGAGCCAGTTTTCTTCCTTCAAGTaGAAACCGAGCTCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: INSATASEQDPSLGQKSQFSSFK*KPSSAS
Trigger: GCTGGCTGAGCTCGGTTTGCACTTGAAGGAAGAAAA...CTGGCTCTTTTGTCCCAGGGAGGGGTCCTGTTCGGAAGCAGTGGCTGAATTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR GCA 90 bp ATCCCGGTTCCTCCAAAACCACTTTCAGGGGATAAATTCAGCCACTGCTTCCGAGCCCTGCCCGCTCCTTaGTCCATTGGCATTTTTCTT +
Preference number: 4 (lower is better)
Translates to: IPVPPKPLSGDKFSHCFRALPAP*SIGIFL
Trigger: AAGAAAAATGCCAATGGAGCAAGGAGCGGGCAGGGC...TCGGAAGCAGTGGCTGAATTTATCCCCTGAAAGTGGTTTTGGAGGAACCGGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR GCA 90 bp TGCAGTGGCTGTGTATCAGAAGCAACCAGGGCTAGGAGTGGACGATTCTATTCCGATAAATTCAGCCACTaGTTCCGAACAGGACCCCTC +
Preference number: 4 (lower is better)
Translates to: CSGCVSEATRARSGRFYSDKFSH*FRTGPL
Trigger: GAGGGGTCCTGTTCGGAAGCAGTGGCTGAATTTATC...GGAATAGAATCGTCCACTCCTAGCCCTGGTTGCTTCTGATACACAGCCACTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000546443.5
ENST00000548263.5
ENST00000550804.6
CDS-3UTR GCA 90 bp AAACTGAGAACCAAAAGGGACCTGAGAGGCCATGATGTCCATGCTGCTGCCTCTGATAAATTCAGCCACTaGTTCCGAACAGGACCCCTC +
Preference number: 4 (lower is better)
Translates to: KLRTKRDLRGHDVHAAASDKFSH*FRTGPL
Trigger: GAGGGGTCCTGTTCGGAAGCAGTGGCTGAATTTATC...AGAGGCAGCAGCATGGACATCATGGCCTCTCAGGTCCCTTTTGGTTCTCAGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000546443.5
ENST00000548263.5
ENST00000550804.6
CDS-3UTR GCA 90 bp GGTACAGTGATGGCTGCTATGAAGGGTGAAGTTCTCGGCAGTGGGAAACTTGTCAGATCTATCGGCTTTTaGATGGATGCTGGGGAGCAG +
Preference number: 4 (lower is better)
Translates to: GTVMAAMKGEVLGSGKLVRSIGF*MDAGEQ
Trigger: CTGCTCCCCAGCATCCATGCAAAAGCCGATAGATCT...GACAAGTTTCCCACTGCCGAGAACTTCACCCTTCATAGCAGCCATCACTGTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR GCA 90 bp TTTCAGGGGATAAATTCAGCCACTGCTTCCGAACAGGACCCCTCCCTGGGACAACGAGTTCCTATTTGCTaGTACTTGGCTGACATCTCC +
Preference number: 4 (lower is better)
Translates to: FQGINSATASEQDPSLGQRVPIC*YLADIS
Trigger: GGAGATGTCAGCCAAGTAGCAGCAAATAGGAACTCG...TTGTCCCAGGGAGGGGTCCTGTTCGGAAGCAGTGGCTGAATTTATCCCCTGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR GCA 90 bp ATAAATTCAGCCACTGCTTCCGAACAGGACCCCTCCCTGGGACAAAAGAGCCAGACGCGAGTTCCTATTTaGTGCTACTTGGCTGACATC +
Preference number: 4 (lower is better)
Translates to: INSATASEQDPSLGQKSQTRVPI*CYLADI
Trigger: GATGTCAGCCAAGTAGCAGCAAATAGGAACTCGCGT...CTGGCTCTTTTGTCCCAGGGAGGGGTCCTGTTCGGAAGCAGTGGCTGAATTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR GCA 90 bp ATGAAACTGAGAACCAAAAGGGACCTGAGAGGCCATGATGTCCATGCTGCTGCCCTCTGCAGAAGATGGTaGTGGCCATGTCATAGAAGG +
Preference number: 4 (lower is better)
Translates to: MKLRTKRDLRGHDVHAAALCRRW*WPCHRR
Trigger: CCTTCTATGACATGGCCAGCACCATCTTCTGCAGAG...GGCAGCAGCATGGACATCATGGCCTCTCAGGTCCCTTTTGGTTCTCAGTTTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546443.5
CDS-3UTR CCA 90 bp TGCAGTGGCTGTGTATCAGAAGCAACCAGGGCTAGGAGTGGACGATTCTATTCCAGTGACATTCCACCTTaGTGTTGGGGATGTAGGTCC +
Preference number: 4 (lower is better)
Translates to: CSGCVSEATRARSGRFYSSDIPP*CWGCRS
Trigger: GGACCTACATCCCCAACACCAAGGTGGAATGTCACT...GGAATAGAATCGTCCACTCCTAGCCCTGGTTGCTTCTGATACACAGCCACTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CCA 90 bp TGTGTGAGTGTGTGTGTGCATGAGTGTGTATTTGTGCATGTACGAGGGAGTAAGGTAGAGCTGAGCTCCTaGTTTGGGCAGGTAGCTGGC +
Preference number: 4 (lower is better)
Translates to: CVSVCVHECVFVHVRGSKVELSS*FGQVAG
Trigger: GCCAGCTACCTGCCCAAACCAGGAGCTCAGCTCTAC...CTTACTCCCTCGTACATGCACAAATACACACTCATGCACACACACACTCACACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262059.8
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CCA 90 bp AGTGGGGGAGTGGTGTGTTTGGATTCGTTCTTTCACCACCAAATACTGACGCGATTCATCCATGGGCCTTaGCTCTCGGAACTGGAAAGG +
Preference number: 4 (lower is better)
Translates to: SGGVVCLDSFFHHQILTRFIHGP*LSELER
Trigger: CCTTTCCAGTTCCGAGAGCCAAGGCCCATGGATGAA...TCGCGTCAGTATTTGGTGGTGAAAGAACGAATCCAAACACACCACTCCCCCACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR CCA 90 bp TGTGTATCAGAAGCAACCAGGGCTAGGAGTGGACGATTCTATTCCCACAGGGGAGTAACACAGTTGCCTTaGGGACAACCAGCAGGATGT +
Preference number: 4 (lower is better)
Translates to: CVSEATRARSGRFYSHRGVTQLP*GQPAGC
Trigger: ACATCCTGCTGGTTGTCCCCAAGGCAACTGTGTTAC...TCCCCTGTGGGAATAGAATCGTCCACTCCTAGCCCTGGTTGCTTCTGATACACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CCA 90 bp CTCCAAAACCACTTTCAGGGGATAAATTCAGCCACTGCTTCCGAACAGGACCCCTCATTCCGTTCTTGCTaGCTCTCATCGAGCTGGTTC +
Preference number: 4 (lower is better)
Translates to: LQNHFQGINSATASEQDPSFRSC*LSSSWF
Trigger: GAACCAGCTCGATGAGAGCCAGCAAGAACGGAATGA...GGGGTCCTGTTCGGAAGCAGTGGCTGAATTTATCCCCTGAAAGTGGTTTTGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CCA 90 bp TGCAGTGGCTGTGTATCAGAAGCAACCAGGGCTAGGAGTGGACGATTCTATTCCTCATTCCGTTCTTGCTaGCTCTCATCGAGCTGGTTC +
Preference number: 4 (lower is better)
Translates to: CSGCVSEATRARSGRFYSSFRSC*LSSSWF
Trigger: GAACCAGCTCGATGAGAGCCAGCAAGAACGGAATGA...GGAATAGAATCGTCCACTCCTAGCCCTGGTTGCTTCTGATACACAGCCACTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CCA 90 bp TCACTCTCAGCAGGAAAGCGCTCCTTACAGATAGGACACTCCTTCCATGTGGGGTCAGTCTTGAACACTTaGTTTTGGGTCCTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: SLSAGKRSLQIGHSFHVGSVLNT*FWVLSS
Trigger: GGAGGAGAGGACCCAAAACCAAGTGTTCAAGACTGA...CCCCACATGGAAGGAGTGTCCTATCTGTAAGGAGCGCTTTCCTGCTGAGAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548263.5
CDS-3UTR CCA 90 bp TTTCAGGGGATAAATTCAGCCACTGCTTCCGAACAGGACCCCTCCCTGGGACAATCAGTCTTGAACACTTaGTTTTGGGTCCTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: FQGINSATASEQDPSLGQSVLNT*FWVLSS
Trigger: GGAGGAGAGGACCCAAAACCAAGTGTTCAAGACTGA...TTGTCCCAGGGAGGGGTCCTGTTCGGAAGCAGTGGCTGAATTTATCCCCTGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CCA 90 bp AAAACTCAGGTAAACCAACGGAAACTCCAAATAAGAGAGGGTAGGGTGCCCCAGTGCTCCTTTTCCTTCTaGAGCACACGCAGGGCTGAC +
Preference number: 4 (lower is better)
Translates to: KTQVNQRKLQIREGRVPQCSFSF*STRRAD
Trigger: GTCAGCCCTGCGTGTGCTCCAGAAGGAAAAGGAGCA...CTGGGGCACCCTACCCTCTCTTATTTGGAGTTTCCGTTGGTTTACCTGAGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CCA 90 bp TGCAGTGGCTGTGTATCAGAAGCAACCAGGGCTAGGAGTGGACGATTCTATTCCCCTCATCCTCTGTGGTaGCATCCTCATTCCACTTCT +
Preference number: 4 (lower is better)
Translates to: CSGCVSEATRARSGRFYSPHPLW*HPHSTS
Trigger: AGAAGTGGAATGAGGATGCCACCACAGAGGATGAGG...GGAATAGAATCGTCCACTCCTAGCCCTGGTTGCTTCTGATACACAGCCACTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000546443.5
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CCA 90 bp CTCCAAAACCACTTTCAGGGGATAAATTCAGCCACTGCTTCCGAACAGGACCCCCCTCATCCTCTGTGGTaGCATCCTCATTCCACTTCT +
Preference number: 4 (lower is better)
Translates to: LQNHFQGINSATASEQDPPHPLW*HPHSTS
Trigger: AGAAGTGGAATGAGGATGCCACCACAGAGGATGAGG...GGGGTCCTGTTCGGAAGCAGTGGCTGAATTTATCCCCTGAAAGTGGTTTTGGAG
51% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000546443.5
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CCA 90 bp CTCAAAGGTGAAGGGGTCCTGGGTGCTGAAAAAGAAGTGTCCATCCATGTGGTCCCTCATCCTCTGTGGTaGCATCCTCATTCCACTTCT +
Preference number: 4 (lower is better)
Translates to: LKGEGVLGAEKEVSIHVVPHPLW*HPHSTS
Trigger: AGAAGTGGAATGAGGATGCCACCACAGAGGATGAGG...GACCACATGGATGGACACTTCTTTTTCAGCACCCAGGACCCCTTCACCTTTGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000548263.5
CDS-3UTR CCA 90 bp TCCATCCCGGTTCCTCCAAAACCACTTTCAGGGGATAAATTCAGCCACTGCTTCACAAAGGCCATAGGGTaGGAGCCTCATGTCTTCTGG +
Preference number: 4 (lower is better)
Translates to: SIPVPPKPLSGDKFSHCFTKAIG*EPHVFW
Trigger: CCAGAAGACATGAGGCTCCCACCCTATGGCCTTTGT...GAAGCAGTGGCTGAATTTATCCCCTGAAAGTGGTTTTGGAGGAACCGGGATGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000546443.5
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CCA 90 bp CAGAAAGAGGAACCAATGAAACTGAGAACCAAAAGGGACCTGAGAGGCCATGATGCTACTGTCCTCAGCTaGCCCAGAGAGGTGAGGAGA +
Preference number: 4 (lower is better)
Translates to: QKEEPMKLRTKRDLRGHDATVLS*PREVRR
Trigger: TCTCCTCACCTCTCTGGGCCAGCTGAGGACAGTAGC...ATCATGGCCTCTCAGGTCCCTTTTGGTTCTCAGTTTCATTGGTTCCTCTTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000546443.5
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CCA 90 bp ATCCCGGTTCCTCCAAAACCACTTTCAGGGGATAAATTCAGCCACTGCTTCCGAAAGTGTCCATCCATGTaGTCCTCCAGGGCATCCTTG +
Preference number: 4 (lower is better)
Translates to: IPVPPKPLSGDKFSHCFRKCPSM*SSRASL
Trigger: CAAGGATGCCCTGGAGGACCACATGGATGGACACTT...TCGGAAGCAGTGGCTGAATTTATCCCCTGAAAGTGGTTTTGGAGGAACCGGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000546443.5
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CCA 90 bp AAAACTCAGGTAAACCAACGGAAACTCCAAATAAGAGAGGGTAGGGTGCCCCAGGGGTGCCCCAGGAATTaGCTTTGGGGCATCAGACAA +
Preference number: 4 (lower is better)
Translates to: KTQVNQRKLQIREGRVPQGCPRN*LWGIRQ
Trigger: TTGTCTGATGCCCCAAAGCCAATTCCTGGGGCACCC...CTGGGGCACCCTACCCTCTCTTATTTGGAGTTTCCGTTGGTTTACCTGAGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 5 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000546443.5
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CCA 90 bp GTAAGATCACTCAAAGGTGAAGGGGTCCTGGGTGCTGAAAAAGAAGTGTCCATCGGGTGCCCCAGGAATTaGCTTTGGGGCATCAGACAA +
Preference number: 4 (lower is better)
Translates to: VRSLKGEGVLGAEKEVSIGCPRN*LWGIRQ
Trigger: TTGTCTGATGCCCCAAAGCCAATTCCTGGGGCACCC...GATGGACACTTCTTTTTCAGCACCCAGGACCCCTTCACCTTTGAGTGATCTTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000548263.5
CDS-3UTR CCA 90 bp GGTACAGTGATGGCTGCTATGAAGGGTGAAGTTCTCGGCAGTGGGAAACTTGTCGGGCACAGAAGTCAATaGGGGAACAGAAAGAGGAAC +
Preference number: 4 (lower is better)
Translates to: GTVMAAMKGEVLGSGKLVGHRSQ*GNRKRN
Trigger: GTTCCTCTTTCTGTTCCCCCATTGACTTCTGTGCCC...GACAAGTTTCCCACTGCCGAGAACTTCACCCTTCATAGCAGCCATCACTGTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR CCA 90 bp TTTCAGGGGATAAATTCAGCCACTGCTTCCGAACAGGACCCCTCCCTGGGACAAGAATACCTAAGGTTATaGAAAAGGCTAGGGTGGGGC +
Preference number: 4 (lower is better)
Translates to: FQGINSATASEQDPSLGQEYLRL*KRLGWG
Trigger: GCCCCACCCTAGCCTTTTCCATAACCTTAGGTATTC...TTGTCCCAGGGAGGGGTCCTGTTCGGAAGCAGTGGCTGAATTTATCCCCTGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000546443.5
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CCA 90 bp ACGATTCTATTCCCACAGGGGAAGGCCTCCTCCATCCCGGTTCCTCCAAAACCAACAGGTATGAGGGGATaGCAACAGAGAAAGAAACAG +
Preference number: 4 (lower is better)
Translates to: TILFPQGKASSIPVPPKPTGMRG*QQRKKQ
Trigger: CTGTTTCTTTCTCTGTTGCCATCCCCTCATACCTGT...TGGTTTTGGAGGAACCGGGATGGAGGAGGCCTTCCCCTGTGGGAATAGAATCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR CCA 90 bp TGTGTGAGTGTGTGTGTGCATGAGTGTGTATTTGTGCATGTACGAGGGAGTAAGGGAAGCCAGGAGGTGTaGGTCCCAGATTCTTCTCGC +
Preference number: 4 (lower is better)
Translates to: CVSVCVHECVFVHVRGSKGSQEV*VPDSSR
Trigger: GCGAGAAGAATCTGGGACCCACACCTCCTGGCTTCC...CTTACTCCCTCGTACATGCACAAATACACACTCATGCACACACACACTCACACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR CCA 90 bp CCAGACTCCCACTTGAGACAACCCACTCATGGCCAGCACACCAGGAGGCACGACCTTAAAGATTATTTCTaGAGGACTGGTCCTATGTTC +
Preference number: 4 (lower is better)
Translates to: PDSHLRQPTHGQHTRRHDLKDYF*RTGPMF
Trigger: GAACATAGGACCAGTCCTCCAGAAATAATCTTTAAG...GTCGTGCCTCCTGGTGTGCTGGCCATGAGTGGGTTGTCTCAAGTGGGAGTCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR CCA 90 bp TCACTCTCAGCAGGAAAGCGCTCCTTACAGATAGGACACTCCTTCCATGTGGGGTCAGTTGTAGCCAGATaGATGCTGGATCCCAGTCTT +
Preference number: 4 (lower is better)
Translates to: SLSAGKRSLQIGHSFHVGSVVAR*MLDPSL
Trigger: AAGACTGGGATCCAGCATCCATCTGGCTACAACTGA...CCCCACATGGAAGGAGTGTCCTATCTGTAAGGAGCGCTTTCCTGCTGAGAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548263.5
3UTR CAA 72 bp AAACTCCAAATAAGAGAGGGTAGGGTGCCCCAGGAATaGGCTTTGGGGCATCAGACAAGGGAGTGTGAGTGT +
Preference number: 4 (lower is better)
Translates to: KLQIREGRVPQE*ALGHQTRECEC
Trigger: ACACTCACACTCCCTTGTCTGATGCCCCAAAGCCAATTCCTGGGGCACCCTACCCTCTCTTATTTGGAGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000546443.5
ENST00000548263.5
ENST00000550804.6
3UTR CAA 72 bp AAGAAGTGTCCATCCATGTGGTCCTCCAGGGCATCCTaGTCACTCTCAGCAGGAAAGCGCTCCTTACAGATA +
Preference number: 4 (lower is better)
Translates to: KKCPSMWSSRAS*SLSAGKRSLQI
Trigger: TATCTGTAAGGAGCGCTTTCCTGCTGAGAGTGACAAGGATGCCCTGGAGGACCACATGGATGGACACTTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548263.5
CDS-3UTR TCA 90 bp TCCATCCCGGTTCCTCCAAAACCACTTTCAGGGGATAAATTCAGCCACTGCTTCAACTGGACACTGGTGTaGATGGGGGAACCATCAGTT +
Preference number: 4 (lower is better)
Translates to: SIPVPPKPLSGDKFSHCFNWTLV*MGEPSV
Trigger: AACTGATGGTTCCCCCATTCACACCAGTGTCCAGTT...GAAGCAGTGGCTGAATTTATCCCCTGAAAGTGGTTTTGGAGGAACCGGGATGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR TCA 90 bp AGGAATTGGCTTTGGGGCATCAGACAAGGGAGTGTGAGTGTGAGTGTGTGTGTGTCAGCACTTTCTCACTaGTGGTCTGGATGTCATCCT +
Preference number: 4 (lower is better)
Translates to: RNWLWGIRQGSVSVSVCVSALSH*WSGCHP
Trigger: AGGATGACATCCAGACCATCAGTGAGAAAGTGCTGA...CACACACACACTCACACTCACACTCCCTTGTCTGATGCCCCAAAGCCAATTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR TCA 90 bp TGTGTATCAGAAGCAACCAGGGCTAGGAGTGGACGATTCTATTCCCACAGGGGATCAGCACTTTCTCACTaGTGGTCTGGATGTCATCCT +
Preference number: 4 (lower is better)
Translates to: CVSEATRARSGRFYSHRGSALSH*WSGCHP
Trigger: AGGATGACATCCAGACCATCAGTGAGAAAGTGCTGA...TCCCCTGTGGGAATAGAATCGTCCACTCCTAGCCCTGGTTGCTTCTGATACACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR TCA 90 bp TGCCTAATGAGGCTGAAAATGAGTCTGACATCGTCCTTCATCTTCCTGCTCCAGCCCAGTGCTGGTTTCTaGCAGGGTACCCACTGTAAA +
Preference number: 4 (lower is better)
Translates to: CLMRLKMSLTSSFIFLLQPSAGF*QGTHCK
Trigger: TTTACAGTGGGTACCCTGTCAGAAACCAGCACTGGG...CTGGAGCAGGAAGATGAAGGACGATGTCAGACTCATTTTCAGCCTCATTAGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548263.5
CDS-3UTR TCA 90 bp TTTCAGGGGATAAATTCAGCCACTGCTTCCGAACAGGACCCCTCCCTGGGACAATTCACCACCAAATACTaGCGCGAGTTCCTATTTGCT +
Preference number: 4 (lower is better)
Translates to: FQGINSATASEQDPSLGQFTTKY*REFLFA
Trigger: AGCAAATAGGAACTCGCGTCAGTATTTGGTGGTGAA...TTGTCCCAGGGAGGGGTCCTGTTCGGAAGCAGTGGCTGAATTTATCCCCTGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR TCA 90 bp AAACTGAGAACCAAAAGGGACCTGAGAGGCCATGATGTCCATGCTGCTGCCTCTGTAGGTGGTATCCTTTaGGCTAGGAGGAAAGTAGTG +
Preference number: 4 (lower is better)
Translates to: KLRTKRDLRGHDVHAAASVGGIL*ARRKVV
Trigger: CACTACTTTCCTCCTAGCTCAAAGGATACCACCTAC...AGAGGCAGCAGCATGGACATCATGGCCTCTCAGGTCCCTTTTGGTTCTCAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR GCA 90 bp CAGAAGCAACCAGGGCTAGGAGTGGACGATTCTATTCCCACAGGGGAAGGCCTCACTTTGCTCCTTGTCTaGTTGTACTTCTTTCAGTTG +
Preference number: 4 (lower is better)
Translates to: QKQPGLGVDDSIPTGEGLTLLLV*LYFFQL
Trigger: CAACTGAAAGAAGTACAAGCAGACAAGGAGCAAAGT...GAGGCCTTCCCCTGTGGGAATAGAATCGTCCACTCCTAGCCCTGGTTGCTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR GCA 90 bp GAGAAGGGAGCTATTGGGTTGGAGGACGAGGGGGTTGTAGGCATGTGCTTGTGCACTTTGCTCCTTGTCTaGTTGTACTTCTTTCAGTTG +
Preference number: 4 (lower is better)
Translates to: EKGAIGLEDEGVVGMCLCTLLLV*LYFFQL
Trigger: CAACTGAAAGAAGTACAAGCAGACAAGGAGCAAAGT...GCACAAGCACATGCCTACAACCCCCTCGTCCTCCAACCCAATAGCTCCCTTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR GCA 90 bp AGGAATTGGCTTTGGGGCATCAGACAAGGGAGTGTGAGTGTGAGTGTGTGTGTGAGCTCAGCCTCACTTTaGTCCTTGTCTGCTTGTACT +
Preference number: 4 (lower is better)
Translates to: RNWLWGIRQGSVSVSVCVSSASL*SLSACT
Trigger: AGTACAAGCAGACAAGGAGCAAAGTGAGGCTGAGCT...CACACACACACTCACACTCACACTCCCTTGTCTGATGCCCCAAAGCCAATTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262059.8
ENST00000548263.5
ENST00000550804.6
CDS-3UTR GCA 90 bp ATTATTTCTTTCCATGTGAGGAGATGCGAGGAGAGGATACAGAATACAGGAATCTGGGCCCCTCGAAGCTaGTCCTTCAAGGGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: IISFHVRRCEERIQNTGIWAPRS*SFKGSS
Trigger: GCTGGAGCCCTTGAAGGAGCAGCTTCGAGGGGCCCA...GATTCCTGTATTCTGTATCCTCTCCTCGCATCTCCTCACATGGAAAGAAATAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR GCA 90 bp CTGACATCTCCTTTCACATTAGAGTCTCAAGCCCATTCAGATCTATCGGCTTTTCCACTTCCAGGCGGCTaGGGTGTAGTTCGGCTATGG +
Preference number: 4 (lower is better)
Translates to: LTSPFTLESQAHSDLSAFPLPGG*GVVRLW
Trigger: CCATAGCCGAACTACACCGCAGCCGCCTGGAAGTGG...AAAAGCCGATAGATCTGAATGGGCTTGAGACTCTAATGTGAAAGGAGATGTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR GCA 90 bp GTTCCTCCAAAACCACTTTCAGGGGATAAATTCAGCCACTGCTTCCGAACAGGAGATCTTGTCCTTCTCTaGCTCCACACTCTGCAGCAG +
Preference number: 4 (lower is better)
Translates to: VPPKPLSGDKFSHCFRTGDLVLL*LHTLQQ
Trigger: CTGCTGCAGAGTGTGGAGGCAGAGAAGGACAAGATC...TCCTGTTCGGAAGCAGTGGCTGAATTTATCCCCTGAAAGTGGTTTTGGAGGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR GCA 90 bp AGGAATTGGCTTTGGGGCATCAGACAAGGGAGTGTGAGTGTGAGTGTGTGTGTGTTCTCCTCCTGTAACTaGTCCTTTTCCTTCTGGAGC +
Preference number: 4 (lower is better)
Translates to: RNWLWGIRQGSVSVSVCVFSSCN*SFSFWS
Trigger: GCTCCAGAAGGAAAAGGAGCAGTTACAGGAGGAGAA...CACACACACACTCACACTCACACTCCCTTGTCTGATGCCCCAAAGCCAATTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR GCA 90 bp TGTGTGAGTGTGTGTGTGCATGAGTGTGTATTTGTGCATGTACGAGGGAGTAAGGTAGGCATGTGCTTGTaGAGGCCATTGCTGAGAGCC +
Preference number: 4 (lower is better)
Translates to: CVSVCVHECVFVHVRGSKVGMCL*RPLLRA
Trigger: GGCTCTCAGCAATGGCCTGCACAAGCACATGCCTAC...CTTACTCCCTCGTACATGCACAAATACACACTCATGCACACACACACTCACACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR GCA 90 bp GAGCCCCCTCTGTGTCGGGGACCATGCTTTGGATACTGGGATAGGCAAACCATGTCTGAAACTGCAAATTaGATGCCAGAAAGACACACA +
Preference number: 4 (lower is better)
Translates to: EPPLCRGPCFGYWDRQTMSETAN*MPERHT
Trigger: TGTGTGTCTTTCTGGCATGCAATTTGCAGTTTCAGA...CATGGTTTGCCTATCCCAGTATCCAAAGCATGGTCCCCGACACAGAGGGGGCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR GCA 90 bp AGGAATTGGCTTTGGGGCATCAGACAAGGGAGTGTGAGTGTGAGTGTGTGTGTGGTAGAAAGGCTGAGTTaGCAAATACCCCTCAGTGAG +
Preference number: 4 (lower is better)
Translates to: RNWLWGIRQGSVSVSVCVVERLS*QIPLSE
Trigger: CTCACTGAGGGGTATTTGGCAACTCAGCCTTTCTAC...CACACACACACTCACACTCACACTCCCTTGTCTGATGCCCCAAAGCCAATTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR GCA 90 bp TGTGTATCAGAAGCAACCAGGGCTAGGAGTGGACGATTCTATTCCCACAGGGGAACGCGAGTTCCTATTTaGTGCTACTTGGCTGACATC +
Preference number: 4 (lower is better)
Translates to: CVSEATRARSGRFYSHRGTRVPI*CYLADI
Trigger: GATGTCAGCCAAGTAGCAGCAAATAGGAACTCGCGT...TCCCCTGTGGGAATAGAATCGTCCACTCCTAGCCCTGGTTGCTTCTGATACACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR GCA 90 bp CTCAAAGGTGAAGGGGTCCTGGGTGCTGAAAAAGAAGTGTCCATCCATGTGGTCTCCATCTCCGTCTGCTaGCTAATGAGGCTGAAAATG +
Preference number: 4 (lower is better)
Translates to: LKGEGVLGAEKEVSIHVVSISVC*LMRLKM
Trigger: CATTTTCAGCCTCATTAGGCAGCAGACGGAGATGGA...GACCACATGGATGGACACTTCTTTTTCAGCACCCAGGACCCCTTCACCTTTGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000548263.5
CDS-3UTR GCA 90 bp AAAACTCAGGTAAACCAACGGAAACTCCAAATAAGAGAGGGTAGGGTGCCCCAGCCCTCCATCTCCGTCTaGTGCCTAATGAGGCTGAAA +
Preference number: 4 (lower is better)
Translates to: KTQVNQRKLQIREGRVPQPSISV*CLMRLK
Trigger: TTTCAGCCTCATTAGGCAGCAGACGGAGATGGAGGG...CTGGGGCACCCTACCCTCTCTTATTTGGAGTTTCCGTTGGTTTACCTGAGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548263.5
CDS-3UTR CCA 90 bp AAAACTCAGGTAAACCAACGGAAACTCCAAATAAGAGAGGGTAGGGTGCCCCAGATTCCACCTTGGTGTTaGGGATGTAGGTCCGGGCTA +
Preference number: 4 (lower is better)
Translates to: KTQVNQRKLQIREGRVPQIPPWC*GCRSGL
Trigger: TAGCCCGGACCTACATCCCCAACACCAAGGTGGAAT...CTGGGGCACCCTACCCTCTCTTATTTGGAGTTTCCGTTGGTTTACCTGAGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CCA 90 bp ATTATTTCTTTCCATGTGAGGAGATGCGAGGAGAGGATACAGAATACAGGAATCCACTGGCACTGGGCATaGTGCCTGGGGGAAGGGTGT +
Preference number: 4 (lower is better)
Translates to: IISFHVRRCEERIQNTGIHWHWA*CLGEGC
Trigger: ACACCCTTCCCCCAGGCACCATGCCCAGTGCCAGTG...GATTCCTGTATTCTGTATCCTCTCCTCGCATCTCCTCACATGGAAAGAAATAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CCA 90 bp AGTGGGGGAGTGGTGTGTTTGGATTCGTTCTTTCACCACCAAATACTGACGCGACTTGGAACTGGACACTaGTGTGAATGGGGGAACCAT +
Preference number: 4 (lower is better)
Translates to: SGGVVCLDSFFHHQILTRLGTGH*CEWGNH
Trigger: ATGGTTCCCCCATTCACACCAGTGTCCAGTTCCAAG...TCGCGTCAGTATTTGGTGGTGAAAGAACGAATCCAAACACACCACTCCCCCACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR CCA 90 bp TCCATCCCGGTTCCTCCAAAACCACTTTCAGGGGATAAATTCAGCCACTGCTTCTGGCTCTCATCGAGCTaGTTCTGTAACACAGTTGCC +
Preference number: 4 (lower is better)
Translates to: SIPVPPKPLSGDKFSHCFWLSSS*FCNTVA
Trigger: GGCAACTGTGTTACAGAACCAGCTCGATGAGAGCCA...GAAGCAGTGGCTGAATTTATCCCCTGAAAGTGGTTTTGGAGGAACCGGGATGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CCA 90 bp AGTGGGGGAGTGGTGTGTTTGGATTCGTTCTTTCACCACCAAATACTGACGCGATGGCTCTCATCGAGCTaGTTCTGTAACACAGTTGCC +
Preference number: 4 (lower is better)
Translates to: SGGVVCLDSFFHHQILTRWLSSS*FCNTVA
Trigger: GGCAACTGTGTTACAGAACCAGCTCGATGAGAGCCA...TCGCGTCAGTATTTGGTGGTGAAAGAACGAATCCAAACACACCACTCCCCCACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR CCA 90 bp TGTGTATCAGAAGCAACCAGGGCTAGGAGTGGACGATTCTATTCCCACAGGGGATTCTCACTGATGGTCTaGATGTCATCCTCTAGCTCC +
Preference number: 4 (lower is better)
Translates to: CVSEATRARSGRFYSHRGFSLMV*MSSSSS
Trigger: GGAGCTAGAGGATGACATCCAGACCATCAGTGAGAA...TCCCCTGTGGGAATAGAATCGTCCACTCCTAGCCCTGGTTGCTTCTGATACACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CCA 90 bp CTCCAAAACCACTTTCAGGGGATAAATTCAGCCACTGCTTCCGAACAGGACCCCTCAGTCTTGAACACTTaGTTTTGGGTCCTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: LQNHFQGINSATASEQDPSVLNT*FWVLSS
Trigger: GGAGGAGAGGACCCAAAACCAAGTGTTCAAGACTGA...GGGGTCCTGTTCGGAAGCAGTGGCTGAATTTATCCCCTGAAAGTGGTTTTGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CCA 90 bp CTCCAAAACCACTTTCAGGGGATAAATTCAGCCACTGCTTCCGAACAGGACCCCAAGGTGAAGGGGTCCTaGGTGCTGAAAAAGAAGTGT +
Preference number: 4 (lower is better)
Translates to: LQNHFQGINSATASEQDPKVKGS*VLKKKC
Trigger: ACACTTCTTTTTCAGCACCCAGGACCCCTTCACCTT...GGGGTCCTGTTCGGAAGCAGTGGCTGAATTTATCCCCTGAAAGTGGTTTTGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 5 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000546443.5
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CCA 90 bp AGGAATTGGCTTTGGGGCATCAGACAAGGGAGTGTGAGTGTGAGTGTGTGTGTGAAGGTGAAGGGGTCCTaGGTGCTGAAAAAGAAGTGT +
Preference number: 4 (lower is better)
Translates to: RNWLWGIRQGSVSVSVCVKVKGS*VLKKKC
Trigger: ACACTTCTTTTTCAGCACCCAGGACCCCTTCACCTT...CACACACACACTCACACTCACACTCCCTTGTCTGATGCCCCAAAGCCAATTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000546443.5
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CCA 90 bp CTCCAAAACCACTTTCAGGGGATAAATTCAGCCACTGCTTCCGAACAGGACCCCAGTGTGTGTGTGCAGTaGCTGTGTATCAGAAGCAAC +
Preference number: 4 (lower is better)
Translates to: LQNHFQGINSATASEQDPSVCVQ*LCIRSN
Trigger: GTTGCTTCTGATACACAGCCACTGCACACACACACT...GGGGTCCTGTTCGGAAGCAGTGGCTGAATTTATCCCCTGAAAGTGGTTTTGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000546443.5
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CCA 90 bp AAACTGAGAACCAAAAGGGACCTGAGAGGCCATGATGTCCATGCTGCTGCCTCTAGTGTGTGTGTGCAGTaGCTGTGTATCAGAAGCAAC +
Preference number: 4 (lower is better)
Translates to: KLRTKRDLRGHDVHAAASSVCVQ*LCIRSN
Trigger: GTTGCTTCTGATACACAGCCACTGCACACACACACT...AGAGGCAGCAGCATGGACATCATGGCCTCTCAGGTCCCTTTTGGTTCTCAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000546443.5
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CCA 90 bp ATGAAACTGAGAACCAAAAGGGACCTGAGAGGCCATGATGTCCATGCTGCTGCCAGTGTGTGTGTGCAGTaGCTGTGTATCAGAAGCAAC +
Preference number: 4 (lower is better)
Translates to: MKLRTKRDLRGHDVHAAASVCVQ*LCIRSN
Trigger: GTTGCTTCTGATACACAGCCACTGCACACACACACT...GGCAGCAGCATGGACATCATGGCCTCTCAGGTCCCTTTTGGTTCTCAGTTTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000546443.5
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CCA 90 bp AAAACTCAGGTAAACCAACGGAAACTCCAAATAAGAGAGGGTAGGGTGCCCCAGCCCAGGAATTGGCTTTaGGGCATCAGACAAGGGAGT +
Preference number: 4 (lower is better)
Translates to: KTQVNQRKLQIREGRVPQPRNWL*GIRQGS
Trigger: ACTCCCTTGTCTGATGCCCCAAAGCCAATTCCTGGG...CTGGGGCACCCTACCCTCTCTTATTTGGAGTTTCCGTTGGTTTACCTGAGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000546443.5
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CCA 90 bp TCCATCCCGGTTCCTCCAAAACCACTTTCAGGGGATAAATTCAGCCACTGCTTCGGGCACAGAAGTCAATaGGGGAACAGAAAGAGGAAC +
Preference number: 4 (lower is better)
Translates to: SIPVPPKPLSGDKFSHCFGHRSQ*GNRKRN
Trigger: GTTCCTCTTTCTGTTCCCCCATTGACTTCTGTGCCC...GAAGCAGTGGCTGAATTTATCCCCTGAAAGTGGTTTTGGAGGAACCGGGATGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000546443.5
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CCA 90 bp TTTCAGGGGATAAATTCAGCCACTGCTTCCGAACAGGACCCCTCCCTGGGACAAAAATGCACCTCCTGCTaGGGATGTTGGCTCATAATT +
Preference number: 4 (lower is better)
Translates to: FQGINSATASEQDPSLGQKCTSC*GCWLII
Trigger: AATTATGAGCCAACATCCCCAGCAGGAGGTGCATTT...TTGTCCCAGGGAGGGGTCCTGTTCGGAAGCAGTGGCTGAATTTATCCCCTGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR CCA 90 bp ATCCCGGTTCCTCCAAAACCACTTTCAGGGGATAAATTCAGCCACTGCTTCCGAGGGGAGTGGTGTGTTTaGATTCGTTCTTTCACCACC +
Preference number: 4 (lower is better)
Translates to: IPVPPKPLSGDKFSHCFRGEWCV*IRSFTT
Trigger: GGTGGTGAAAGAACGAATCCAAACACACCACTCCCC...TCGGAAGCAGTGGCTGAATTTATCCCCTGAAAGTGGTTTTGGAGGAACCGGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR CCA 90 bp TTGGGGCATCAGACAAGGGAGTGTGAGTGTGAGTGTGTGTGTGCAGTGGCTGTGATGGTTCTGTTATACTaGAGTACAGGGTTCCTTAGG +
Preference number: 4 (lower is better)
Translates to: LGHQTRECECECVCAVAVMVLLY*STGFLR
Trigger: CCTAAGGAACCCTGTACTCCAGTATAACAGAACCAT...CACAGCCACTGCACACACACACTCACACTCACACTCCCTTGTCTGATGCCCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR CCA 90 bp ATAAATTCAGCCACTGCTTCCGAACAGGACCCCTCCCTGGGACAAAAGAGCCAGAAGGCATCTGGGATTTaGAGCAGTGAGTCATTTTCC +
Preference number: 4 (lower is better)
Translates to: INSATASEQDPSLGQKSQKASGI*SSESFS
Trigger: GGAAAATGACTCACTGCTCCAAATCCCAGATGCCTT...CTGGCTCTTTTGTCCCAGGGAGGGGTCCTGTTCGGAAGCAGTGGCTGAATTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000548263.5
CDS-3UTR CCA 90 bp AAGAGGGAAAGCATTTCAGTTGTAGCCAGATGGATGCTGGATCCCAGTCTTCTCGGAAGCAGGGCAATTTaGGCTCTGCAGAAGATGGTG +
Preference number: 4 (lower is better)
Translates to: KRESISVVARWMLDPSLLGSRAI*ALQKMV
Trigger: CACCATCTTCTGCAGAGCCCAAATTGCCCTGCTTCC...GAGAAGACTGGGATCCAGCATCCATCTGGCTACAACTGAAATGCTTTCCCTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548263.5
CDS-3UTR CCA 90 bp GTTCCTCCAAAACCACTTTCAGGGGATAAATTCAGCCACTGCTTCCGAACAGGATTCTTTAGTCCCTGCTaGTCTCTGCAGTGCAGAGCC +
Preference number: 4 (lower is better)
Translates to: VPPKPLSGDKFSHCFRTGFFSPC*SLQCRA
Trigger: GGCTCTGCACTGCAGAGACCAGCAGGGACTAAAGAA...TCCTGTTCGGAAGCAGTGGCTGAATTTATCCCCTGAAAGTGGTTTTGGAGGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548263.5
CDS-3UTR TCA 90 bp CAGAAAGAGGAACCAATGAAACTGAGAACCAAAAGGGACCTGAGAGGCCATGATCCCAGTGCTGGTTTCTaGCAGGGTACCCACTGTAAA +
Preference number: 4 (lower is better)
Translates to: QKEEPMKLRTKRDLRGHDPSAGF*QGTHCK
Trigger: TTTACAGTGGGTACCCTGTCAGAAACCAGCACTGGG...ATCATGGCCTCTCAGGTCCCTTTTGGTTCTCAGTTTCATTGGTTCCTCTTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000546443.5
ENST00000548263.5
ENST00000550804.6
CDS-3UTR TCA 90 bp GCCCATTCAGATCTATCGGCTTTTGCATGGATGCTGGGGAGCAGGGAGGAAAGGGATAGAAAATGGGCATaGAACCTAAGTGTATGCATG +
Preference number: 4 (lower is better)
Translates to: AHSDLSAFAWMLGSREERDRKWA*NLSVCM
Trigger: CATGCATACACTTAGGTTTCATGCCCATTTTCTATC...CCTTTCCTCCCTGCTCCCCAGCATCCATGCAAAAGCCGATAGATCTGAATGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR TCA 90 bp CTCCAAAACCACTTTCAGGGGATAAATTCAGCCACTGCTTCCGAACAGGACCCCTTATTTCTTTCCATGTaGGGAGATGCGAGGAGAGGA +
Preference number: 4 (lower is better)
Translates to: LQNHFQGINSATASEQDPLFLSM*GDARRG
Trigger: TCCTCTCCTCGCATCTCCTCACATGGAAAGAAATAA...GGGGTCCTGTTCGGAAGCAGTGGCTGAATTTATCCCCTGAAAGTGGTTTTGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000546443.5
ENST00000548263.5
ENST00000550804.6
CDS-3UTR TCA 90 bp CTGACATCTCCTTTCACATTAGAGTCTCAAGCCCATTCAGATCTATCGGCTTTTTCAATTACCCTTCCTTaGGCCCCCTCTGTGTCGGGG +
Preference number: 4 (lower is better)
Translates to: LTSPFTLESQAHSDLSAFSITLP*APSVSG
Trigger: CCCCGACACAGAGGGGGCTCAAGGAAGGGTAATTGA...AAAAGCCGATAGATCTGAATGGGCTTGAGACTCTAATGTGAAAGGAGATGTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR TCA 90 bp ATAAATTCAGCCACTGCTTCCGAACAGGACCCCTCCCTGGGACAAAAGAGCCAGCAGGGAGGAAAGGGATaGTCCATTATAGAAGAGAAA +
Preference number: 4 (lower is better)
Translates to: INSATASEQDPSLGQKSQQGGKG*SIIEEK
Trigger: TTTCTCTTCTATAATGGATCATCCCTTTCCTCCCTG...CTGGCTCTTTTGTCCCAGGGAGGGGTCCTGTTCGGAAGCAGTGGCTGAATTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR TCA 90 bp TTTCAGGGGATAAATTCAGCCACTGCTTCCGAACAGGACCCCTCCCTGGGACAATGGGATTTGGAGCAGTaGGTCATTTTCCTTGTTAAC +
Preference number: 4 (lower is better)
Translates to: FQGINSATASEQDPSLGQWDLEQ*VIFLVN
Trigger: GTTAACAAGGAAAATGACTCACTGCTCCAAATCCCA...TTGTCCCAGGGAGGGGTCCTGTTCGGAAGCAGTGGCTGAATTTATCCCCTGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000548263.5
CDS-3UTR GCA 90 bp CTGAGAACCAAAAGGGACCTGAGAGGCCATGATGTCCATGCTGCTGCCTCTGTGACTTTGCTCCTTGTCTaGTTGTACTTCTTTCAGTTG +
Preference number: 4 (lower is better)
Translates to: LRTKRDLRGHDVHAAASVTLLLV*LYFFQL
Trigger: CAACTGAAAGAAGTACAAGCAGACAAGGAGCAAAGT...CACAGAGGCAGCAGCATGGACATCATGGCCTCTCAGGTCCCTTTTGGTTCTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR GCA 90 bp ACGATTCTATTCCCACAGGGGAAGGCCTCCTCCATCCCGGTTCCTCCAAAACCAACTTTGCTCCTTGTCTaGTTGTACTTCTTTCAGTTG +
Preference number: 4 (lower is better)
Translates to: TILFPQGKASSIPVPPKPTLLLV*LYFFQL
Trigger: CAACTGAAAGAAGTACAAGCAGACAAGGAGCAAAGT...TGGTTTTGGAGGAACCGGGATGGAGGAGGCCTTCCCCTGTGGGAATAGAATCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR GCA 90 bp ATCCCGGTTCCTCCAAAACCACTTTCAGGGGATAAATTCAGCCACTGCTTCCGACCTCTCCTCCTGAACTaGCTTCTCCAATCGAAGTAT +
Preference number: 4 (lower is better)
Translates to: IPVPPKPLSGDKFSHCFRPLLLN*LLQSKY
Trigger: ATACTTCGATTGGAGAAGGCAGTTCAGGAGGAGAGG...TCGGAAGCAGTGGCTGAATTTATCCCCTGAAAGTGGTTTTGGAGGAACCGGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR GCA 90 bp GTTCCTCCAAAACCACTTTCAGGGGATAAATTCAGCCACTGCTTCCGAACAGGACACTTTTCCATGGCATaGACCCACCCTGGGACTAAA +
Preference number: 4 (lower is better)
Translates to: VPPKPLSGDKFSHCFRTGHFSMA*THPGTK
Trigger: TTTAGTCCCAGGGTGGGTGCATGCCATGGAAAAGTG...TCCTGTTCGGAAGCAGTGGCTGAATTTATCCCCTGAAAGTGGTTTTGGAGGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR GCA 90 bp GAGAAGGGAGCTATTGGGTTGGAGGACGAGGGGGTTGTAGGCATGTGCTTGTGCACAAATGCTTTACGATaGTGTGTATGTGTCTGTCTA +
Preference number: 4 (lower is better)
Translates to: EKGAIGLEDEGVVGMCLCTNALR*CVCVCL
Trigger: TAGACAGACACATACACAGCATCGTAAAGCATTTGT...GCACAAGCACATGCCTACAACCCCCTCGTCCTCCAACCCAATAGCTCCCTTCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR GCA 90 bp CTCCAAAACCACTTTCAGGGGATAAATTCAGCCACTGCTTCCGAACAGGACCCCATTAAATGCACCTCCTaGTGGGGATGTTGGCTCATA +
Preference number: 4 (lower is better)
Translates to: LQNHFQGINSATASEQDPIKCTS*WGCWLI
Trigger: TATGAGCCAACATCCCCAGCAGGAGGTGCATTTAAT...GGGGTCCTGTTCGGAAGCAGTGGCTGAATTTATCCCCTGAAAGTGGTTTTGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR GCA 90 bp TCCATCCCGGTTCCTCCAAAACCACTTTCAGGGGATAAATTCAGCCACTGCTTCGTAGAAAGGCTGAGTTaGCAAATACCCCTCAGTGAG +
Preference number: 4 (lower is better)
Translates to: SIPVPPKPLSGDKFSHCFVERLS*QIPLSE
Trigger: CTCACTGAGGGGTATTTGGCAACTCAGCCTTTCTAC...GAAGCAGTGGCTGAATTTATCCCCTGAAAGTGGTTTTGGAGGAACCGGGATGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR CCA 90 bp GTTCCTCCAAAACCACTTTCAGGGGATAAATTCAGCCACTGCTTCCGAACAGGACTTGGAACTGGACACTaGTGTGAATGGGGGAACCAT +
Preference number: 4 (lower is better)
Translates to: VPPKPLSGDKFSHCFRTGLGTGH*CEWGNH
Trigger: ATGGTTCCCCCATTCACACCAGTGTCCAGTTCCAAG...TCCTGTTCGGAAGCAGTGGCTGAATTTATCCCCTGAAAGTGGTTTTGGAGGAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CCA 90 bp ATCCCGGTTCCTCCAAAACCACTTTCAGGGGATAAATTCAGCCACTGCTTCCGATCAGTCTTGAACACTTaGTTTTGGGTCCTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: IPVPPKPLSGDKFSHCFRSVLNT*FWVLSS
Trigger: GGAGGAGAGGACCCAAAACCAAGTGTTCAAGACTGA...TCGGAAGCAGTGGCTGAATTTATCCCCTGAAAGTGGTTTTGGAGGAACCGGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CCA 90 bp AAAACTCAGGTAAACCAACGGAAACTCCAAATAAGAGAGGGTAGGGTGCCCCAGCCTCATCCTCTGTGGTaGCATCCTCATTCCACTTCT +
Preference number: 4 (lower is better)
Translates to: KTQVNQRKLQIREGRVPQPHPLW*HPHSTS
Trigger: AGAAGTGGAATGAGGATGCCACCACAGAGGATGAGG...CTGGGGCACCCTACCCTCTCTTATTTGGAGTTTCCGTTGGTTTACCTGAGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000546443.5
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CCA 90 bp ATTATTTCTTTCCATGTGAGGAGATGCGAGGAGAGGATACAGAATACAGGAATCCAGGGCCCCCAGTGCTaGTTTCTGACAGGGTACCCA +
Preference number: 4 (lower is better)
Translates to: IISFHVRRCEERIQNTGIQGPQC*FLTGYP
Trigger: TGGGTACCCTGTCAGAAACCAGCACTGGGGGCCCTG...GATTCCTGTATTCTGTATCCTCTCCTCGCATCTCCTCACATGGAAAGAAATAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000546443.5
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CCA 90 bp ATCCCGGTTCCTCCAAAACCACTTTCAGGGGATAAATTCAGCCACTGCTTCCGAAAGGTGAAGGGGTCCTaGGTGCTGAAAAAGAAGTGT +
Preference number: 4 (lower is better)
Translates to: IPVPPKPLSGDKFSHCFRKVKGS*VLKKKC
Trigger: ACACTTCTTTTTCAGCACCCAGGACCCCTTCACCTT...TCGGAAGCAGTGGCTGAATTTATCCCCTGAAAGTGGTTTTGGAGGAACCGGGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000546443.5
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CCA 90 bp GTTCCTCCAAAACCACTTTCAGGGGATAAATTCAGCCACTGCTTCCGAACAGGAGGGCACAGAAGTCAATaGGGGAACAGAAAGAGGAAC +
Preference number: 4 (lower is better)
Translates to: VPPKPLSGDKFSHCFRTGGHRSQ*GNRKRN
Trigger: GTTCCTCTTTCTGTTCCCCCATTGACTTCTGTGCCC...TCCTGTTCGGAAGCAGTGGCTGAATTTATCCCCTGAAAGTGGTTTTGGAGGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000546443.5
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CCA 90 bp TGTGTGAGTGTGTGTGTGCATGAGTGTGTATTTGTGCATGTACGAGGGAGTAAGTGGAAAAGGCTAGGGTaGGGCACAGAAGTCAATGGG +
Preference number: 4 (lower is better)
Translates to: CVSVCVHECVFVHVRGSKWKRLG*GTEVNG
Trigger: CCCATTGACTTCTGTGCCCCACCCTAGCCTTTTCCA...CTTACTCCCTCGTACATGCACAAATACACACTCATGCACACACACACTCACACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000546443.5
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CCA 90 bp CAGAAAGAGGAACCAATGAAACTGAGAACCAAAAGGGACCTGAGAGGCCATGATAAGCTTTTATTGCTGTaGGGGGACCTGGAGAGGGAG +
Preference number: 4 (lower is better)
Translates to: QKEEPMKLRTKRDLRGHDKLLLL*GDLERE
Trigger: CTCCCTCTCCAGGTCCCCCCACAGCAATAAAAGCTT...ATCATGGCCTCTCAGGTCCCTTTTGGTTCTCAGTTTCATTGGTTCCTCTTTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000546443.5
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CCA 90 bp ATGAAACTGAGAACCAAAAGGGACCTGAGAGGCCATGATGTCCATGCTGCTGCCACAGGTATGAGGGGATaGCAACAGAGAAAGAAACAG +
Preference number: 4 (lower is better)
Translates to: MKLRTKRDLRGHDVHAAATGMRG*QQRKKQ
Trigger: CTGTTTCTTTCTCTGTTGCCATCCCCTCATACCTGT...GGCAGCAGCATGGACATCATGGCCTCTCAGGTCCCTTTTGGTTCTCAGTTTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR CCA 90 bp AGGAATTGGCTTTGGGGCATCAGACAAGGGAGTGTGAGTGTGAGTGTGTGTGTGAGTAAGGAAGAGAAATaGCCCCACATTTTGTGGCAC +
Preference number: 4 (lower is better)
Translates to: RNWLWGIRQGSVSVSVCVSKEEK*PHILWH
Trigger: GTGCCACAAAATGTGGGGCCATTTCTCTTCCTTACT...CACACACACACTCACACTCACACTCCCTTGTCTGATGCCCCAAAGCCAATTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR TCA 90 bp AAAACTCAGGTAAACCAACGGAAACTCCAAATAAGAGAGGGTAGGGTGCCCCAGGTAGGTGGTATCCTTTaGGCTAGGAGGAAAGTAGTG +
Preference number: 4 (lower is better)
Translates to: KTQVNQRKLQIREGRVPQVGGIL*ARRKVV
Trigger: CACTACTTTCCTCCTAGCTCAAAGGATACCACCTAC...CTGGGGCACCCTACCCTCTCTTATTTGGAGTTTCCGTTGGTTTACCTGAGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR GCA 90 bp GTTCCTCCAAAACCACTTTCAGGGGATAAATTCAGCCACTGCTTCCGAACAGGAAGCTCAGCCTCACTTTaGTCCTTGTCTGCTTGTACT +
Preference number: 4 (lower is better)
Translates to: VPPKPLSGDKFSHCFRTGSSASL*SLSACT
Trigger: AGTACAAGCAGACAAGGAGCAAAGTGAGGCTGAGCT...TCCTGTTCGGAAGCAGTGGCTGAATTTATCCCCTGAAAGTGGTTTTGGAGGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262059.8
ENST00000548263.5
ENST00000550804.6
CDS-3UTR GCA 90 bp AAAACTCAGGTAAACCAACGGAAACTCCAAATAAGAGAGGGTAGGGTGCCCCAGAGCTCAGCCTCACTTTaGTCCTTGTCTGCTTGTACT +
Preference number: 4 (lower is better)
Translates to: KTQVNQRKLQIREGRVPQSSASL*SLSACT
Trigger: AGTACAAGCAGACAAGGAGCAAAGTGAGGCTGAGCT...CTGGGGCACCCTACCCTCTCTTATTTGGAGTTTCCGTTGGTTTACCTGAGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262059.8
ENST00000548263.5
ENST00000550804.6
CDS-3UTR GCA 90 bp AAAACTCAGGTAAACCAACGGAAACTCCAAATAAGAGAGGGTAGGGTGCCCCAGTTCTCCTCCTGTAACTaGTCCTTTTCCTTCTGGAGC +
Preference number: 4 (lower is better)
Translates to: KTQVNQRKLQIREGRVPQFSSCN*SFSFWS
Trigger: GCTCCAGAAGGAAAAGGAGCAGTTACAGGAGGAGAA...CTGGGGCACCCTACCCTCTCTTATTTGGAGTTTCCGTTGGTTTACCTGAGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CCA 90 bp CAGAAAGAGGAACCAATGAAACTGAGAACCAAAAGGGACCTGAGAGGCCATGATAGTGACATTCCACCTTaGTGTTGGGGATGTAGGTCC +
Preference number: 4 (lower is better)
Translates to: QKEEPMKLRTKRDLRGHDSDIPP*CWGCRS
Trigger: GGACCTACATCCCCAACACCAAGGTGGAATGTCACT...ATCATGGCCTCTCAGGTCCCTTTTGGTTCTCAGTTTCATTGGTTCCTCTTTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CCA 90 bp ATTATTTCTTTCCATGTGAGGAGATGCGAGGAGAGGATACAGAATACAGGAATCCCACACACCTGGCCCTaGCGGTTCACATATCGGAAC +
Preference number: 4 (lower is better)
Translates to: IISFHVRRCEERIQNTGIPHTWP*RFTYRN
Trigger: GTTCCGATATGTGAACCGCCAGGGCCAGGTGTGTGG...GATTCCTGTATTCTGTATCCTCTCCTCGCATCTCCTCACATGGAAAGAAATAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262059.8
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CCA 90 bp TGTGTGAGTGTGTGTGTGCATGAGTGTGTATTTGTGCATGTACGAGGGAGTAAGGTAACACAGTTGCCTTaGGGACAACCAGCAGGATGT +
Preference number: 4 (lower is better)
Translates to: CVSVCVHECVFVHVRGSKVTQLP*GQPAGC
Trigger: ACATCCTGCTGGTTGTCCCCAAGGCAACTGTGTTAC...CTTACTCCCTCGTACATGCACAAATACACACTCATGCACACACACACTCACACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CCA 90 bp CAGTCACACCTCATGATAAGAACACATTTTGTGACAACAGTCATACATATCATAGAGGCTGCAAGCTCCTaGGCCCCTCGAAGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: QSHLMIRTHFVTTVIHIIEAASS*APRSCS
Trigger: GGAGCAGCTTCGAGGGGCCCAGGAGCTTGCAGCCTC...TATGATATGTATGACTGTTGTCACAAAATGTGTTCTTATCATGAGGTGTGACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR CCA 90 bp ATTATTTCTTTCCATGTGAGGAGATGCGAGGAGAGGATACAGAATACAGGAATCAGCAGGAGAGGAGCCTaGGTCTCCACGCTCACAAAG +
Preference number: 4 (lower is better)
Translates to: IISFHVRRCEERIQNTGISRRGA*VSTLTK
Trigger: CTTTGTGAGCGTGGAGACCCAGGCTCCTCTCCTGCT...GATTCCTGTATTCTGTATCCTCTCCTCGCATCTCCTCACATGGAAAGAAATAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000546443.5
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CCA 90 bp AAAACTCAGGTAAACCAACGGAAACTCCAAATAAGAGAGGGTAGGGTGCCCCAGAGTGTGTGTGTGCAGTaGCTGTGTATCAGAAGCAAC +
Preference number: 4 (lower is better)
Translates to: KTQVNQRKLQIREGRVPQSVCVQ*LCIRSN
Trigger: GTTGCTTCTGATACACAGCCACTGCACACACACACT...CTGGGGCACCCTACCCTCTCTTATTTGGAGTTTCCGTTGGTTTACCTGAGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000546443.5
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CCA 90 bp GTTCCTCCAAAACCACTTTCAGGGGATAAATTCAGCCACTGCTTCCGAACAGGAGAATACCTAAGGTTATaGAAAAGGCTAGGGTGGGGC +
Preference number: 4 (lower is better)
Translates to: VPPKPLSGDKFSHCFRTGEYLRL*KRLGWG
Trigger: GCCCCACCCTAGCCTTTTCCATAACCTTAGGTATTC...TCCTGTTCGGAAGCAGTGGCTGAATTTATCCCCTGAAAGTGGTTTTGGAGGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000546443.5
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CCA 90 bp CTCCAAAACCACTTTCAGGGGATAAATTCAGCCACTGCTTCCGAACAGGACCCCCAAACTACAAAGGGATaGATATCAGGGGGAAGCTTT +
Preference number: 4 (lower is better)
Translates to: LQNHFQGINSATASEQDPQTTKG*ISGGSF
Trigger: AAAGCTTCCCCCTGATATCCATCCCTTTGTAGTTTG...GGGGTCCTGTTCGGAAGCAGTGGCTGAATTTATCCCCTGAAAGTGGTTTTGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000546443.5
ENST00000550804.6
CDS-3UTR CCA 90 bp TGTGTATCAGAAGCAACCAGGGCTAGGAGTGGACGATTCTATTCCCACAGGGGACAAACTACAAAGGGATaGATATCAGGGGGAAGCTTT +
Preference number: 4 (lower is better)
Translates to: CVSEATRARSGRFYSHRGQTTKG*ISGGSF
Trigger: AAAGCTTCCCCCTGATATCCATCCCTTTGTAGTTTG...TCCCCTGTGGGAATAGAATCGTCCACTCCTAGCCCTGGTTGCTTCTGATACACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000546443.5
ENST00000550804.6
CDS-3UTR TCA 90 bp CTCCAAAACCACTTTCAGGGGATAAATTCAGCCACTGCTTCCGAACAGGACCCCGATAGAAAATGGGCATaGAACCTAAGTGTATGCATG +
Preference number: 4 (lower is better)
Translates to: LQNHFQGINSATASEQDPDRKWA*NLSVCM
Trigger: CATGCATACACTTAGGTTTCATGCCCATTTTCTATC...GGGGTCCTGTTCGGAAGCAGTGGCTGAATTTATCCCCTGAAAGTGGTTTTGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000546443.5
ENST00000548263.5
ENST00000550804.6
CDS-3UTR TCA 90 bp AAACTGAGAACCAAAAGGGACCTGAGAGGCCATGATGTCCATGCTGCTGCCTCTGATAGAAAATGGGCATaGAACCTAAGTGTATGCATG +
Preference number: 4 (lower is better)
Translates to: KLRTKRDLRGHDVHAAASDRKWA*NLSVCM
Trigger: CATGCATACACTTAGGTTTCATGCCCATTTTCTATC...AGAGGCAGCAGCATGGACATCATGGCCTCTCAGGTCCCTTTTGGTTCTCAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000546443.5
ENST00000548263.5
ENST00000550804.6
CDS-3UTR TCA 90 bp AAGAGGGAAAGCATTTCAGTTGTAGCCAGATGGATGCTGGATCCCAGTCTTCTCTTATTTCTTTCCATGTaGGGAGATGCGAGGAGAGGA +
Preference number: 4 (lower is better)
Translates to: KRESISVVARWMLDPSLLLFLSM*GDARRG
Trigger: TCCTCTCCTCGCATCTCCTCACATGGAAAGAAATAA...GAGAAGACTGGGATCCAGCATCCATCTGGCTACAACTGAAATGCTTTCCCTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548263.5
CDS-3UTR GCA 90 bp CAGAAAGAGGAACCAATGAAACTGAGAACCAAAAGGGACCTGAGAGGCCATGATTTCTCCTCCTGTAACTaGTCCTTTTCCTTCTGGAGC +
Preference number: 4 (lower is better)
Translates to: QKEEPMKLRTKRDLRGHDFSSCN*SFSFWS
Trigger: GCTCCAGAAGGAAAAGGAGCAGTTACAGGAGGAGAA...ATCATGGCCTCTCAGGTCCCTTTTGGTTCTCAGTTTCATTGGTTCCTCTTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR GCA 90 bp AGGAATTGGCTTTGGGGCATCAGACAAGGGAGTGTGAGTGTGAGTGTGTGTGTGTCTGAAACTGCAAATTaGATGCCAGAAAGACACACA +
Preference number: 4 (lower is better)
Translates to: RNWLWGIRQGSVSVSVCVSETAN*MPERHT
Trigger: TGTGTGTCTTTCTGGCATGCAATTTGCAGTTTCAGA...CACACACACACTCACACTCACACTCCCTTGTCTGATGCCCCAAAGCCAATTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR GCA 90 bp CAGAAAGAGGAACCAATGAAACTGAGAACCAAAAGGGACCTGAGAGGCCATGATGGCAGGACCTCTGAGTaGATTGATAAGATAGGGGTA +
Preference number: 4 (lower is better)
Translates to: QKEEPMKLRTKRDLRGHDGRTSE*IDKIGV
Trigger: TACCCCTATCTTATCAATGCACTCAGAGGTCCTGCC...ATCATGGCCTCTCAGGTCCCTTTTGGTTCTCAGTTTCATTGGTTCCTCTTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548263.5
CDS-3UTR CCA 90 bp ATTATTTCTTTCCATGTGAGGAGATGCGAGGAGAGGATACAGAATACAGGAATCTGCTCCTTTTCCTTCTaGAGCACACGCAGGGCTGAC +
Preference number: 4 (lower is better)
Translates to: IISFHVRRCEERIQNTGICSFSF*STRRAD
Trigger: GTCAGCCCTGCGTGTGCTCCAGAAGGAAAAGGAGCA...GATTCCTGTATTCTGTATCCTCTCCTCGCATCTCCTCACATGGAAAGAAATAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CCA 90 bp TGTGTGAGTGTGTGTGTGCATGAGTGTGTATTTGTGCATGTACGAGGGAGTAAGAAGGTGAAGGGGTCCTaGGTGCTGAAAAAGAAGTGT +
Preference number: 4 (lower is better)
Translates to: CVSVCVHECVFVHVRGSKKVKGS*VLKKKC
Trigger: ACACTTCTTTTTCAGCACCCAGGACCCCTTCACCTT...CTTACTCCCTCGTACATGCACAAATACACACTCATGCACACACACACTCACACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000546443.5
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CCA 90 bp CAGAAAGAGGAACCAATGAAACTGAGAACCAAAAGGGACCTGAGAGGCCATGATGAATACCTAAGGTTATaGAAAAGGCTAGGGTGGGGC +
Preference number: 4 (lower is better)
Translates to: QKEEPMKLRTKRDLRGHDEYLRL*KRLGWG
Trigger: GCCCCACCCTAGCCTTTTCCATAACCTTAGGTATTC...ATCATGGCCTCTCAGGTCCCTTTTGGTTCTCAGTTTCATTGGTTCCTCTTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000546443.5
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CCA 90 bp CTGACATCTCCTTTCACATTAGAGTCTCAAGCCCATTCAGATCTATCGGCTTTTAATGGAGAAAGGGAATaGTGGGGGTGGTCCACACAG +
Preference number: 4 (lower is better)
Translates to: LTSPFTLESQAHSDLSAFNGERE*WGWSTQ
Trigger: CTGTGTGGACCACCCCCACCATTCCCTTTCTCCATT...AAAAGCCGATAGATCTGAATGGGCTTGAGACTCTAATGTGAAAGGAGATGTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
3UTR CAA 72 bp CAAACCATGAGTAAGGAAGAGAAATGGCCCCACATTTaGTGGCACCCCCAGTCTGAAACTGCAAATTGCATG +
Preference number: 4 (lower is better)
Translates to: QTMSKEEKWPHI*WHPQSETANCM
Trigger: CATGCAATTTGCAGTTTCAGACTGGGGGTGCCACAAAATGTGGGGCCATTTCTCTTCCTTACTCATGGTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
3UTR CAA 72 bp TCTACATTTCTCATTCCTGTAGGTAACAGGTGGCCATaGAGGTTCGATAAGTGGGGGAGTGGTGTGTTTGGA +
Preference number: 4 (lower is better)
Translates to: STFLIPVGNRWP*RFDKWGSGVFG
Trigger: TCCAAACACACCACTCCCCCACTTATCGAACCTCAATGGCCACCTGTTACCTACAGGAATGAGAAATGTAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR TCA 90 bp ATTATTTCTTTCCATGTGAGGAGATGCGAGGAGAGGATACAGAATACAGGAATCGGGGTAGGGATTACCTaGAGGCATCTGGGATTTGGA +
Preference number: 4 (lower is better)
Translates to: IISFHVRRCEERIQNTGIGVGIT*RHLGFG
Trigger: TCCAAATCCCAGATGCCTTCAGGTAATCCCTACCCC...GATTCCTGTATTCTGTATCCTCTCCTCGCATCTCCTCACATGGAAAGAAATAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548263.5
CDS-3UTR GCA 90 bp CAGTCACACCTCATGATAAGAACACATTTTGTGACAACAGTCATACATATCATAACTCTGCAGCAGCCCTaGCCGCTCCTTGCTCCATTG +
Preference number: 4 (lower is better)
Translates to: QSHLMIRTHFVTTVIHIITLQQP*PLLAPL
Trigger: CAATGGAGCAAGGAGCGGGCAGGGCTGCTGCAGAGT...TATGATATGTATGACTGTTGTCACAAAATGTGTTCTTATCATGAGGTGTGACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR GCA 90 bp TGCCTAATGAGGCTGAAAATGAGTCTGACATCGTCCTTCATCTTCCTGCTCCAGCAATCGAAGTATCTCTaGACTCAGCTTCAGGATCTT +
Preference number: 4 (lower is better)
Translates to: CLMRLKMSLTSSFIFLLQQSKYL*TQLQDL
Trigger: AAGATCCTGAAGCTGAGTGCAGAGATACTTCGATTG...CTGGAGCAGGAAGATGAAGGACGATGTCAGACTCATTTTCAGCCTCATTAGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548263.5
CDS-3UTR GCA 90 bp TGTGTATCAGAAGCAACCAGGGCTAGGAGTGGACGATTCTATTCCCACAGGGGAACAAATGCTTTACGATaGTGTGTATGTGTCTGTCTA +
Preference number: 4 (lower is better)
Translates to: CVSEATRARSGRFYSHRGTNALR*CVCVCL
Trigger: TAGACAGACACATACACAGCATCGTAAAGCATTTGT...TCCCCTGTGGGAATAGAATCGTCCACTCCTAGCCCTGGTTGCTTCTGATACACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR GCA 90 bp AAACTGAGAACCAAAAGGGACCTGAGAGGCCATGATGTCCATGCTGCTGCCTCTAATCTGCCTTCAAGTTaGTTACAGTTTAGGGAGAAT +
Preference number: 4 (lower is better)
Translates to: KLRTKRDLRGHDVHAAASNLPSS*LQFREN
Trigger: ATTCTCCCTAAACTGTAAGCAACTTGAAGGCAGATT...AGAGGCAGCAGCATGGACATCATGGCCTCTCAGGTCCCTTTTGGTTCTCAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR CCA 90 bp ATTATTTCTTTCCATGTGAGGAGATGCGAGGAGAGGATACAGAATACAGGAATCCCTCCTCATCCTCTGTaGTGGCATCCTCATTCCACT +
Preference number: 4 (lower is better)
Translates to: IISFHVRRCEERIQNTGIPPHPL*WHPHST
Trigger: AGTGGAATGAGGATGCCACCACAGAGGATGAGGAGG...GATTCCTGTATTCTGTATCCTCTCCTCGCATCTCCTCACATGGAAAGAAATAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000546443.5
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CCA 90 bp TGCAGTGGCTGTGTATCAGAAGCAACCAGGGCTAGGAGTGGACGATTCTATTCCCTTAAAGATTATTTCTaGAGGACTGGTCCTATGTTC +
Preference number: 4 (lower is better)
Translates to: CSGCVSEATRARSGRFYSLKDYF*RTGPMF
Trigger: GAACATAGGACCAGTCCTCCAGAAATAATCTTTAAG...GGAATAGAATCGTCCACTCCTAGCCCTGGTTGCTTCTGATACACAGCCACTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR TCA 90 bp CAGTCACACCTCATGATAAGAACACATTTTGTGACAACAGTCATACATATCATACCTGGGACTAAACCCTaGGCAGAAGTGACAGGGACC +
Preference number: 4 (lower is better)
Translates to: QSHLMIRTHFVTTVIHIIPGTKP*AEVTGT
Trigger: GGTCCCTGTCACTTCTGCTCAGGGTTTAGTCCCAGG...TATGATATGTATGACTGTTGTCACAAAATGTGTTCTTATCATGAGGTGTGACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR GCA 90 bp TGTGTGAGTGTGTGTGTGCATGAGTGTGTATTTGTGCATGTACGAGGGAGTAAGCAATCGAAGTATCTCTaGACTCAGCTTCAGGATCTT +
Preference number: 4 (lower is better)
Translates to: CVSVCVHECVFVHVRGSKQSKYL*TQLQDL
Trigger: AAGATCCTGAAGCTGAGTGCAGAGATACTTCGATTG...CTTACTCCCTCGTACATGCACAAATACACACTCATGCACACACACACTCACACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CCA 90 bp ATTATTTCTTTCCATGTGAGGAGATGCGAGGAGAGGATACAGAATACAGGAATCAGGGTGTCCTTCATCTaGGCCACCTTGTCTTTCAGT +
Preference number: 4 (lower is better)
Translates to: IISFHVRRCEERIQNTGIRVSFI*ATLSFS
Trigger: ACTGAAAGACAAGGTGGCCCAGATGAAGGACACCCT...GATTCCTGTATTCTGTATCCTCTCCTCGCATCTCCTCACATGGAAAGAAATAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262059.8
ENST00000548263.5
ENST00000550804.6
CDS-3UTR TCA 90 bp CAGTCACACCTCATGATAAGAACACATTTTGTGACAACAGTCATACATATCATAAGGCAGCCTCCACCTTaGAGATGCCAATCCAGTCAC +
Preference number: 4 (lower is better)
Translates to: QSHLMIRTHFVTTVIHIIRQPPP*RCQSSH
Trigger: GTGACTGGATTGGCATCTTCAAGGTGGAGGCTGCCT...TATGATATGTATGACTGTTGTCACAAAATGTGTTCTTATCATGAGGTGTGACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR GCA 90 bp ATTATTTCTTTCCATGTGAGGAGATGCGAGGAGAGGATACAGAATACAGGAATCCCTCTCCTCCTGAACTaGCTTCTCCAATCGAAGTAT +
Preference number: 4 (lower is better)
Translates to: IISFHVRRCEERIQNTGIPLLLN*LLQSKY
Trigger: ATACTTCGATTGGAGAAGGCAGTTCAGGAGGAGAGG...GATTCCTGTATTCTGTATCCTCTCCTCGCATCTCCTCACATGGAAAGAAATAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR GCA 90 bp CAGTCACACCTCATGATAAGAACACATTTTGTGACAACAGTCATACATATCATAATGGTTCTCCTGTTGTaGCACTTGGAGCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: QSHLMIRTHFVTTVIHIIMVLLL*HLELSL
Trigger: GAGGCTGAGCTCCAAGTGGCACAACAGGAGAACCAT...TATGATATGTATGACTGTTGTCACAAAATGTGTTCTTATCATGAGGTGTGACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR GCA 90 bp CAGAAAGAGGAACCAATGAAACTGAGAACCAAAAGGGACCTGAGAGGCCATGATAATCTGCCTTCAAGTTaGTTACAGTTTAGGGAGAAT +
Preference number: 4 (lower is better)
Translates to: QKEEPMKLRTKRDLRGHDNLPSS*LQFREN
Trigger: ATTCTCCCTAAACTGTAAGCAACTTGAAGGCAGATT...ATCATGGCCTCTCAGGTCCCTTTTGGTTCTCAGTTTCATTGGTTCCTCTTTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR TCA 90 bp CAGTCACACCTCATGATAAGAACACATTTTGTGACAACAGTCATACATATCATAAACTGGACACTGGTGTaGATGGGGGAACCATCAGTT +
Preference number: 4 (lower is better)
Translates to: QSHLMIRTHFVTTVIHIINWTLV*MGEPSV
Trigger: AACTGATGGTTCCCCCATTCACACCAGTGTCCAGTT...TATGATATGTATGACTGTTGTCACAAAATGTGTTCTTATCATGAGGTGTGACTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR GCA 90 bp CTGACATCTCCTTTCACATTAGAGTCTCAAGCCCATTCAGATCTATCGGCTTTTCAGGTCCTTAACAAATaGTTTACGATGCTGTGTATG +
Preference number: 4 (lower is better)
Translates to: LTSPFTLESQAHSDLSAFQVLNK*FTMLCM
Trigger: CATACACAGCATCGTAAAGCATTTGTTAAGGACCTG...AAAAGCCGATAGATCTGAATGGGCTTGAGACTCTAATGTGAAAGGAGATGTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR CCA 90 bp CAGTCACACCTCATGATAAGAACACATTTTGTGACAACAGTCATACATATCATAGTAACACAGTTGCCTTaGGGACAACCAGCAGGATGT +
Preference number: 4 (lower is better)
Translates to: QSHLMIRTHFVTTVIHIIVTQLP*GQPAGC
Trigger: ACATCCTGCTGGTTGTCCCCAAGGCAACTGTGTTAC...TATGATATGTATGACTGTTGTCACAAAATGTGTTCTTATCATGAGGTGTGACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR CCA 90 bp CAGTCACACCTCATGATAAGAACACATTTTGTGACAACAGTCATACATATCATACAGTGTCTGTATCAGTaGCCTTGTGCAGCTAGCCAT +
Preference number: 4 (lower is better)
Translates to: QSHLMIRTHFVTTVIHIIQCLYQ*PCAASH
Trigger: ATGGCTAGCTGCACAAGGCCACTGATACAGACACTG...TATGATATGTATGACTGTTGTCACAAAATGTGTTCTTATCATGAGGTGTGACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR TCA 90 bp ATTATTTCTTTCCATGTGAGGAGATGCGAGGAGAGGATACAGAATACAGGAATCGATAGAAAATGGGCATaGAACCTAAGTGTATGCATG +
Preference number: 4 (lower is better)
Translates to: IISFHVRRCEERIQNTGIDRKWA*NLSVCM
Trigger: CATGCATACACTTAGGTTTCATGCCCATTTTCTATC...GATTCCTGTATTCTGTATCCTCTCCTCGCATCTCCTCACATGGAAAGAAATAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000546443.5
ENST00000548263.5
ENST00000550804.6
CDS GCA 90 bp GCTTTCTGCTGGCTTGAGGCTGCAAGCTCCTGGGCCCCTCGAAGCTaGTCCTTCAAGGGCTCCAGCTCGGCCACCCGCTGCTGGGCCTGG +
Preference number: 5 (lower is better)
Translates to: AFCWLEAASSWAPRS*SFKGSSSATRCWAW
Trigger: CCAGGCCCAGCAGCGGGTGGCCGAGCTGGAGCCCTTGAAGGAGCAGCTTCGAGGGGCCCAGGAGCTTGCAGCCTCAAGCCAGCAGAAAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262059.8
ENST00000548263.5
ENST00000549935.6
ENST00000550804.6
ENST00000552282.1
CDS TCA 90 bp AAGGCCATAGGGTGGGAGCCTCATGTCTTCTGGGGACTCGTCCTCTaGGTCTGTCAGAGCTGCCGGGCAGCTCAGCCCCACAGCGGCCTC +
Preference number: 5 (lower is better)
Translates to: KAIGWEPHVFWGLVL*VCQSCRAAQPHSGL
Trigger: GAGGCCGCTGTGGGGCTGAGCTGCCCGGCAGCTCTGACAGACTCAGAGGACGAGTCCCCAGAAGACATGAGGCTCCCACCCTATGGCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000546443.5
ENST00000548263.5
ENST00000550804.6
CDS GCA 90 bp TCCGTGTGCTCCTGCCTGGCAGTTGCCAGAGCCCTCTCGAGCTCCTaGACTCGGCTCCTCAGCTCTGTCACCTGTCCCTCCAGCTGTAGC +
Preference number: 5 (lower is better)
Translates to: SVCSCLAVARALSSS*TRLLSSVTCPSSCS
Trigger: GCTACAGCTGGAGGGACAGGTGACAGAGCTGAGGAGCCGAGTGCAGGAGCTCGAGAGGGCTCTGGCAACTGCCAGGCAGGAGCACACGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000547988.5
ENST00000548263.5
ENST00000549935.6
ENST00000550804.6
CDS CCA 90 bp CTCCGACTTCTGGAGGGGAGGGAGAAGAGTGGGCGCGAGGGCTTCTaGGGTTTGTGGTTCTTCTGCGCCCTTTTGCCGCTGCGTGCTCGG +
Preference number: 5 (lower is better)
Translates to: LRLLEGREKSGREGF*GLWFFCALLPLRAR
Trigger: CCGAGCACGCAGCGGCAAAAGGGCGCAGAAGAACCACAAACCCCAGAAGCCCTCGCGCCCACTCTTCTCCCTCCCCTCCAGAAGTCGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000549784.5
CDS CCA 90 bp GGTCCCTGGCTGCTGCTGCACTGGCCAACTCCTCCCCAAGAAGGGTaGCTTTCTGCTGGCTTGAGGCTGCAAGCTCCTGGGCCCCTCGAA +
Preference number: 5 (lower is better)
Translates to: GPWLLLHWPTPPQEG*LSAGLRLQAPGPLE
Trigger: TTCGAGGGGCCCAGGAGCTTGCAGCCTCAAGCCAGCAGAAAGCCACCCTTCTTGGGGAGGAGTTGGCCAGTGCAGCAGCAGCCAGGGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000549613.1
ENST00000549935.6
ENST00000550804.6
ENST00000552282.1
CDS CCA 90 bp CCACTTCCAGGCGGCTGCGGTGTAGTTCGGCTATGGTGCGGTCCCTaGCTGCTGCTGCACTGGCCAACTCCTCCCCAAGAAGGGTGGCTT +
Preference number: 5 (lower is better)
Translates to: PLPGGCGVVRLWCGP*LLLHWPTPPQEGWL
Trigger: AAGCCACCCTTCTTGGGGAGGAGTTGGCCAGTGCAGCAGCAGCCAGGGACCGCACCATAGCCGAACTACACCGCAGCCGCCTGGAAGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000549613.1
ENST00000549935.6
ENST00000550804.6
ENST00000552282.1
CDS CCA 90 bp CTGCCGGGCAGCTCAGCCCCACAGCGGCCTCCTCATCCTCTGTGGTaGCATCCTCATTCCACTTCTCATCTGCCACCTTCTCCAGGCGGG +
Preference number: 5 (lower is better)
Translates to: LPGSSAPQRPPHPLW*HPHSTSHLPPSPGG
Trigger: CCCGCCTGGAGAAGGTGGCAGATGAGAAGTGGAATGAGGATGCCACCACAGAGGATGAGGAGGCCGCTGTGGGGCTGAGCTGCCCGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000546443.5
ENST00000548263.5
ENST00000550804.6
CDS CCA 90 bp GCTGCTGCACTGGCCAACTCCTCCCCAAGAAGGGTGGCTTTCTGCTaGCTTGAGGCTGCAAGCTCCTGGGCCCCTCGAAGCTGCTCCTTC +
Preference number: 5 (lower is better)
Translates to: AAALANSSPRRVAFC*LEAASSWAPRSCSF
Trigger: GAAGGAGCAGCTTCGAGGGGCCCAGGAGCTTGCAGCCTCAAGCCAGCAGAAAGCCACCCTTCTTGGGGAGGAGTTGGCCAGTGCAGCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000549613.1
ENST00000549935.6
ENST00000550804.6
ENST00000552282.1
CDS TCA 90 bp TGCACTGGCCAACTCCTCCCCAAGAAGGGTGGCTTTCTGCTGGCTTaGGGCTGCAAGCTCCTGGGCCCCTCGAAGCTGCTCCTTCAAGGG +
Preference number: 5 (lower is better)
Translates to: CTGQLLPKKGGFLLA*GCKLLGPSKLLLQG
Trigger: CCCTTGAAGGAGCAGCTTCGAGGGGCCCAGGAGCTTGCAGCCTCAAGCCAGCAGAAAGCCACCCTTCTTGGGGAGGAGTTGGCCAGTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000549613.1
ENST00000549935.6
ENST00000550804.6
ENST00000552282.1
CDS GCA 90 bp CCCCTTGTACTGTTCCATCAGCTCCGTGTGCTCCTGCCTGGCAGTTaGCAGAGCCCTCTCGAGCTCCTGCACTCGGCTCCTCAGCTCTGT +
Preference number: 5 (lower is better)
Translates to: PLVLFHQLRVLLPGS*QSPLELLHSAPQLC
Trigger: ACAGAGCTGAGGAGCCGAGTGCAGGAGCTCGAGAGGGCTCTGGCAACTGCCAGGCAGGAGCACACGGAGCTGATGGAACAGTACAAGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000549935.6
ENST00000550804.6
CDS GCA 90 bp GACCGGGAAATCCCCTTGTACTGTTCCATCAGCTCCGTGTGCTCCTaGCTGGCAGTTGCCAGAGCCCTCTCGAGCTCCTGCACTCGGCTC +
Preference number: 5 (lower is better)
Translates to: DREIPLYCSISSVCS*LAVARALSSSCTRL
Trigger: GAGCCGAGTGCAGGAGCTCGAGAGGGCTCTGGCAACTGCCAGGCAGGAGCACACGGAGCTGATGGAACAGTACAAGGGGATTTCCCGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000549935.6
ENST00000550804.6
CDS GCA 90 bp CTACCTGGCCCAGCTCCCACCTTGTACTGTTCCATCAGCTCCGTGTaGTCCTGCCTGGCAGTTGCCAGAGCCCTCTCGAGCTCCTGCACT +
Preference number: 5 (lower is better)
Translates to: LPGPAPTLYCSISSV*SCLAVARALSSSCT
Trigger: AGTGCAGGAGCTCGAGAGGGCTCTGGCAACTGCCAGGCAGGAGCACACGGAGCTGATGGAACAGTACAAGGTGGGAGCTGGGCCAGGTAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547988.5
CDS GCA 90 bp GCTTTCTGCTGGCTTGAGGCTGCAAGCTCCTGGGCCCCTCGAAGCTaGTCCTTCAAGGGCTCCAGCTCGGCCTCAGGAGAAAGGAGGAGA +
Preference number: 5 (lower is better)
Translates to: AFCWLEAASSWAPRS*SFKGSSSASGERRR
Trigger: TCTCCTCCTTTCTCCTGAGGCCGAGCTGGAGCCCTTGAAGGAGCAGCTTCGAGGGGCCCAGGAGCTTGCAGCCTCAAGCCAGCAGAAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549613.1
CDS CCA 90 bp TGCGGTGTAGTTCGGCTATGGTGCGGTCCCTGGCTGCTGCTGCACTaGCCAACTCCTCCCCAAGAAGGGTGGCTTTCTGCTGGCTTGAGG +
Preference number: 5 (lower is better)
Translates to: CGVVRLWCGPWLLLH*PTPPQEGWLSAGLR
Trigger: CCTCAAGCCAGCAGAAAGCCACCCTTCTTGGGGAGGAGTTGGCCAGTGCAGCAGCAGCCAGGGACCGCACCATAGCCGAACTACACCGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000549613.1
ENST00000549935.6
ENST00000550804.6
ENST00000552282.1
CDS CCA 90 bp CAGCTCCCACCTTGTACTGTTCCATCAGCTCCGTGTGCTCCTGCCTaGCAGTTGCCAGAGCCCTCTCGAGCTCCTGCACTCGGCTCCTCA +
Preference number: 5 (lower is better)
Translates to: QLPPCTVPSAPCAPA*QLPEPSRAPALGSS
Trigger: TGAGGAGCCGAGTGCAGGAGCTCGAGAGGGCTCTGGCAACTGCCAGGCAGGAGCACACGGAGCTGATGGAACAGTACAAGGTGGGAGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547988.5
CDS-3UTR CAA 90 bp GGAGTGGACGATTCTATTCCCACAGGGGAAGGCCTCCTCCATCCCGGTTCCTCCCAGGGACCCATGAGTTaGCTCCCTCCCCAACTGCCG +
Preference number: 5 (lower is better)
Translates to: GVDDSIPTGEGLLHPGSSQGPMS*LPPQLP
Trigger: CGGCAGTTGGGGAGGGAGCAAACTCATGGGTCCCTG...GGAGGAACCGGGATGGAGGAGGCCTTCCCCTGTGGGAATAGAATCGTCCACTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR CAA 90 bp GGAGTGGACGATTCTATTCCCACAGGGGAAGGCCTCCTCCATCCCGGTTCCTCCGGGAACGGGATGGGGTaGCTAGGAGACGGAGACGTG +
Preference number: 5 (lower is better)
Translates to: GVDDSIPTGEGLLHPGSSGNGMG*LGDGDV
Trigger: CACGTCTCCGTCTCCTAGCAACCCCATCCCGTTCCC...GGAGGAACCGGGATGGAGGAGGCCTTCCCCTGTGGGAATAGAATCGTCCACTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS GCA 90 bp CCATGGGACCGGGAAATCCCCTTGTACTGTTCCATCAGCTCCGTGTaGTCCTGCCTGGCAGTTGCCAGAGCCCTCTCGAGCTCCTGCACT +
Preference number: 5 (lower is better)
Translates to: PWDREIPLYCSISSV*SCLAVARALSSSCT
Trigger: AGTGCAGGAGCTCGAGAGGGCTCTGGCAACTGCCAGGCAGGAGCACACGGAGCTGATGGAACAGTACAAGGGGATTTCCCGGTCCCATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000549935.6
ENST00000550804.6
CDS GCA 90 bp GCTTTCTGCTGGCTTGAGGCTGCAAGCTCCTGGGCCCCTCGAAGCTaGTCCTTCAAGGGCTCCAGCTCGGCCTCACTTTGCTCCTTGTCT +
Preference number: 5 (lower is better)
Translates to: AFCWLEAASSWAPRS*SFKGSSSASLCSLS
Trigger: AGACAAGGAGCAAAGTGAGGCCGAGCTGGAGCCCTTGAAGGAGCAGCTTCGAGGGGCCCAGGAGCTTGCAGCCTCAAGCCAGCAGAAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430117.6
CDS GCA 90 bp CACCTTGTACTGTTCCATCAGCTCCGTGTGCTCCTGCCTGGCAGTTaGCAGAGCCCTCTCGAGCTCCTGCACTCGGCTCCTCAGCTCTGT +
Preference number: 5 (lower is better)
Translates to: HLVLFHQLRVLLPGS*QSPLELLHSAPQLC
Trigger: ACAGAGCTGAGGAGCCGAGTGCAGGAGCTCGAGAGGGCTCTGGCAACTGCCAGGCAGGAGCACACGGAGCTGATGGAACAGTACAAGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547988.5
CDS CCA 90 bp GGGAAATCCCCTTGTACTGTTCCATCAGCTCCGTGTGCTCCTGCCTaGCAGTTGCCAGAGCCCTCTCGAGCTCCTGCACTCGGCTCCTCA +
Preference number: 5 (lower is better)
Translates to: GKSPCTVPSAPCAPA*QLPEPSRAPALGSS
Trigger: TGAGGAGCCGAGTGCAGGAGCTCGAGAGGGCTCTGGCAACTGCCAGGCAGGAGCACACGGAGCTGATGGAACAGTACAAGGGGATTTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000549935.6
ENST00000550804.6
CDS-3UTR CAA 90 bp CGATTCTATTCCCACAGGGGAAGGCCTCCTCCATCCCGGTTCCTCCAAAACCACGCTCCTGCCTGGCAGTaGCCAGAGCCCTCTCGAGCT +
Preference number: 5 (lower is better)
Translates to: RFYSHRGRPPPSRFLQNHAPAWQ*PEPSRA
Trigger: AGCTCGAGAGGGCTCTGGCAACTGCCAGGCAGGAGC...GTGGTTTTGGAGGAACCGGGATGGAGGAGGCCTTCCCCTGTGGGAATAGAATCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CAA 90 bp GCCATGTGGCTCCTGTGGGTGTATGTGCGGCTTGGCAGGGGCTGTGGCATGGGATCCTCCAGGGCATCCTaGTCACTCTCAGCAGGAAAG +
Preference number: 5 (lower is better)
Translates to: AMWLLWVYVRLGRGCGMGSSRAS*SLSAGK
Trigger: CTTTCCTGCTGAGAGTGACAAGGATGCCCTGGAGGA...TCCCATGCCACAGCCCCTGCCAAGCCGCACATACACCCACAGGAGCCACATGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR CAA 90 bp ACCAGGGCTAGGAGTGGACGATTCTATTCCCACAGGGGAAGGCCTCCTCCATCCTGGCTTTCTGCTGGCTaGAGGCTGCAAGCTCCTGGG +
Preference number: 5 (lower is better)
Translates to: TRARSGRFYSHRGRPPPSWLSAG*RLQAPG
Trigger: CCCAGGAGCTTGCAGCCTCAAGCCAGCAGAAAGCCA...GGATGGAGGAGGCCTTCCCCTGTGGGAATAGAATCGTCCACTCCTAGCCCTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CAA 90 bp CCAGACTCCCACTTGAGACAACCCACTCATGGCCAGCACACCAGGAGGCACGACTGCTTGTGCAGGCCATaGCTGAGAGCCTTGGTGAGC +
Preference number: 5 (lower is better)
Translates to: PDSHLRQPTHGQHTRRHDCLCRP*LRALVS
Trigger: GCTCACCAAGGCTCTCAGCAATGGCCTGCACAAGCA...GTCGTGCCTCCTGGTGTGCTGGCCATGAGTGGGTTGTCTCAAGTGGGAGTCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR CAA 90 bp GCCATGTGGCTCCTGTGGGTGTATGTGCGGCTTGGCAGGGGCTGTGGCATGGGACTCCTGCTGGGGATGTaGGCTCATAATTCCTCTCTG +
Preference number: 5 (lower is better)
Translates to: AMWLLWVYVRLGRGCGMGLLLGM*AHNSSL
Trigger: CAGAGAGGAATTATGAGCCAACATCCCCAGCAGGAG...TCCCATGCCACAGCCCCTGCCAAGCCGCACATACACCCACAGGAGCCACATGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS TCA 90 bp TCAGCCTCCGAGTCAGAGCTACTGTCCTCAGCTGGCCCAGAGAGGTaGGGAGAAATGGGAGCCGGCTGGCTGATGACAACAAGGGGAGAA +
Preference number: 5 (lower is better)
Translates to: SASESELLSSAGPER*GEMGAGWLMTTRGE
Trigger: TTCTCCCCTTGTTGTCATCAGCCAGCCGGCTCCCATTTCTCCTCACCTCTCTGGGCCAGCTGAGGACAGTAGCTCTGACTCGGAGGCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000430117.6
ENST00000546443.5
ENST00000548263.5
ENST00000549935.6
ENST00000550804.6
CDS GCA 90 bp GGGCTTCTGGGGTTTGTGGTTCTTCTGCGCCCTTTTGCCGCTGCGTaGTCGGATCTAGGACTATACATCCCAGAAGGCTGCGCGCAAGGA +
Preference number: 5 (lower is better)
Translates to: GLLGFVVLLRPFAAA*SDLGLYIPEGCAQG
Trigger: TCCTTGCGCGCAGCCTTCTGGGATGTATAGTCCTAGATCCGAGCACGCAGCGGCAAAAGGGCGCAGAAGAACCACAAACCCCAGAAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000549784.5
CDS-3UTR CAA 90 bp ATAAATTCAGCCACTGCTTCCGAACAGGACCCCTCCCTGGGACAAAAGAGCCAGGCTCCTGCCTGGCAGTaGCCAGAGCCCTCTCGAGCT +
Preference number: 5 (lower is better)
Translates to: INSATASEQDPSLGQKSQAPAWQ*PEPSRA
Trigger: AGCTCGAGAGGGCTCTGGCAACTGCCAGGCAGGAGC...CTGGCTCTTTTGTCCCAGGGAGGGGTCCTGTTCGGAAGCAGTGGCTGAATTTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CAA 90 bp AGGAGTGGACGATTCTATTCCCACAGGGGAAGGCCTCCTCCATCCCGGTTCCTCCCCAAGGAGCTTCTCTaGTTCCCGAGTCAGGGCCTT +
Preference number: 5 (lower is better)
Translates to: RSGRFYSHRGRPPPSRFLPKELL*FPSQGL
Trigger: AAGGCCCTGACTCGGGAACAAGAGAAGCTCCTTGGG...GAGGAACCGGGATGGAGGAGGCCTTCCCCTGTGGGAATAGAATCGTCCACTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CAA 90 bp AGGAGTGGACGATTCTATTCCCACAGGGGAAGGCCTCCTCCATCCCGGTTCCTCAGCACTCTGCTCCTCTaGCCAGCTCTTCGCCTCCTT +
Preference number: 5 (lower is better)
Translates to: RSGRFYSHRGRPPPSRFLSTLLL*PALRLL
Trigger: AAGGAGGCGAAGAGCTGGCAAGAGGAGCAGAGTGCT...GAGGAACCGGGATGGAGGAGGCCTTCCCCTGTGGGAATAGAATCGTCCACTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262059.8
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CAA 90 bp ACCCACTCATGGCCAGCACACCAGGAGGCACGACAGGACAGTAACTGCCCAGCACGGGCCAGCTCAGTCTaGAACACTTGGTTTTGGGTC +
Preference number: 5 (lower is better)
Translates to: THSWPAHQEARQDSNCPARASSV*NTWFWV
Trigger: GACCCAAAACCAAGTGTTCAAGACTGAGCTGGCCCG...TGCTGGGCAGTTACTGTCCTGTCGTGCCTCCTGGTGTGCTGGCCATGAGTGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR CAA 90 bp TGCAGCATCCTGGCCTCTCCCACAGCGTCTTTCTCCCCACAATCCTGGAAGGCTCCCCAGGAATTGGCTTaGGGGCATCAGACAAGGGAG +
Preference number: 5 (lower is better)
Translates to: CSILASPTASFSPQSWKAPQELA*GHQTRE
Trigger: CTCCCTTGTCTGATGCCCCAAAGCCAATTCCTGGGG...AGCCTTCCAGGATTGTGGGGAGAAAGACGCTGTGGGAGAGGCCAGGATGCTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000548263.5
CDS-3UTR CAA 90 bp ACCAGGGCTAGGAGTGGACGATTCTATTCCCACAGGGGAAGGCCTCCTCCATCCAGGGTGCCCCAGGAATaGGCTTTGGGGCATCAGACA +
Preference number: 5 (lower is better)
Translates to: TRARSGRFYSHRGRPPPSRVPQE*ALGHQT
Trigger: TGTCTGATGCCCCAAAGCCAATTCCTGGGGCACCCT...GGATGGAGGAGGCCTTCCCCTGTGGGAATAGAATCGTCCACTCCTAGCCCTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000546443.5
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CAA 90 bp TTGGGGCATCAGACAAGGGAGTGTGAGTGTGAGTGTGTGTGTGCAGTGGCTGTGCAGGGACCCATGAGTTaGCTCCCTCCCCAACTGCCG +
Preference number: 5 (lower is better)
Translates to: LGHQTRECECECVCAVAVQGPMS*LPPQLP
Trigger: CGGCAGTTGGGGAGGGAGCAAACTCATGGGTCCCTG...CACAGCCACTGCACACACACACTCACACTCACACTCCCTTGTCTGATGCCCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR CAA 90 bp AGGGTGCCCCAGGAATTGGCTTTGGGGCATCAGACAAGGGAGTGTGAGTGTGAGCTGAGAAGGGAGCTATaGGGTTGGAGGACGAGGGGG +
Preference number: 5 (lower is better)
Translates to: RVPQELALGHQTRECECELRREL*GWRTRG
Trigger: CCCCCTCGTCCTCCAACCCAATAGCTCCCTTCTCAG...CTCACACTCACACTCCCTTGTCTGATGCCCCAAAGCCAATTCCTGGGGCACCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR CAA 90 bp ACCCACTCATGGCCAGCACACCAGGAGGCACGACAGGACAGTAACTGCCCAGCAGGTAACAGGTGGCCATaGAGGTTCGATAAGTGGGGG +
Preference number: 5 (lower is better)
Translates to: THSWPAHQEARQDSNCPAGNRWP*RFDKWG
Trigger: CCCCCACTTATCGAACCTCAATGGCCACCTGTTACC...TGCTGGGCAGTTACTGTCCTGTCGTGCCTCCTGGTGTGCTGGCCATGAGTGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR CAA 90 bp CCAGACTCCCACTTGAGACAACCCACTCATGGCCAGCACACCAGGAGGCACGACGGTAACAGGTGGCCATaGAGGTTCGATAAGTGGGGG +
Preference number: 5 (lower is better)
Translates to: PDSHLRQPTHGQHTRRHDGNRWP*RFDKWG
Trigger: CCCCCACTTATCGAACCTCAATGGCCACCTGTTACC...GTCGTGCCTCCTGGTGTGCTGGCCATGAGTGGGTTGTCTCAAGTGGGAGTCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS TCA 90 bp TCTTCAGCCGAGTCAGAGCTACTGTCCTCAGCTGGCCCAGAGAGGTaGGGAGAAATGGGAGCCGGCTGGCTGATGACAACAAGGGGAGAA +
Preference number: 5 (lower is better)
Translates to: SSAESELLSSAGPER*GEMGAGWLMTTRGE
Trigger: TTCTCCCCTTGTTGTCATCAGCCAGCCGGCTCCCATTTCTCCTCACCTCTCTGGGCCAGCTGAGGACAGTAGCTCTGACTCGGCTGAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262059.8
CDS GCA 90 bp CGGCTCCTCAGCTCTGTCACCTGTCCCTCCAGCTGTAGCTTCAGCTaGATCAGGTCATTCCGTTCTTGCTGGCTCTCATCGAGCTGGTTC +
Preference number: 5 (lower is better)
Translates to: RLLSSVTCPSSCSFS*IRSFRSCWLSSSWF
Trigger: GAACCAGCTCGATGAGAGCCAGCAAGAACGGAATGACCTGATGCAGCTGAAGCTACAGCTGGAGGGACAGGTGACAGAGCTGAGGAGCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000547988.5
ENST00000548263.5
ENST00000549935.6
ENST00000550804.6
CDS GCA 90 bp ATGTCATCCTCTAGCTCCAGGATGCGTGCCACATGGTCTCCCTGTTaGCGGCTCAGGATGTCCCTCTCTTCTGTGATCTCCCCATGGGAC +
Preference number: 5 (lower is better)
Translates to: MSSSSSRMRATWSPC*RLRMSLSSVISPWD
Trigger: GTCCCATGGGGAGATCACAGAAGAGAGGGACATCCTGAGCCGGCAACAGGGAGACCATGTGGCACGCATCCTGGAGCTAGAGGATGACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000547988.5
ENST00000548263.5
ENST00000549935.6
ENST00000550804.6
CDS GCA 90 bp CTGCCCAGTTCAGGAAGCAGTAAGTTGGCCTCCTCACCCCCACTCTaGACAGCTGCCATCAGGACTGACTTCTCATCTTCAGCCTCCGAG +
Preference number: 5 (lower is better)
Translates to: LPSSGSSKLASSPPL*TAAIRTDFSSSASE
Trigger: CTCGGAGGCTGAAGATGAGAAGTCAGTCCTGATGGCAGCTGTGCAGAGTGGGGGTGAGGAGGCCAACTTACTGCTTCCTGAACTGGGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000430117.6
ENST00000546443.5
ENST00000548263.5
ENST00000550804.6
CDS CCA 90 bp CCCAGCAAGGTTACATGGAGCCTTCCTCAACAGCGGGAGGTAGAGTaGGGAAGAGGTGTTACAAGATTGGGGCTACACGGACTCAGCCCC +
Preference number: 5 (lower is better)
Translates to: PSKVTWSLPQQREVE*GRGVTRLGLHGLSP
Trigger: GGGGCTGAGTCCGTGTAGCCCCAATCTTGTAACACCTCTTCCCCACTCTACCTCCCGCTGTTGAGGAAGGCTCCATGTAACCTTGCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549935.6
CDS-3UTR CAA 90 bp ACGATTCTATTCCCACAGGGGAAGGCCTCCTCCATCCCGGTTCCTCCAAAACCAGGGCAGGTAGCTGGCTaGGAACTGGACACTGGTGTG +
Preference number: 5 (lower is better)
Translates to: TILFPQGKASSIPVPPKPGQVAG*ELDTGV
Trigger: CACACCAGTGTCCAGTTCCAAGCCAGCTACCTGCCC...TGGTTTTGGAGGAACCGGGATGGAGGAGGCCTTCCCCTGTGGGAATAGAATCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262059.8
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CAA 90 bp TTGGGGCATCAGACAAGGGAGTGTGAGTGTGAGTGTGTGTGTGCAGTGGCTGTGGGGCAGGTAGCTGGCTaGGAACTGGACACTGGTGTG +
Preference number: 5 (lower is better)
Translates to: LGHQTRECECECVCAVAVGQVAG*ELDTGV
Trigger: CACACCAGTGTCCAGTTCCAAGCCAGCTACCTGCCC...CACAGCCACTGCACACACACACTCACACTCACACTCCCTTGTCTGATGCCCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262059.8
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CAA 90 bp ACCAGGGCTAGGAGTGGACGATTCTATTCCCACAGGGGAAGGCCTCCTCCATCCGTTCATCCATGGGCCTaGGCTCTCGGAACTGGAAAG +
Preference number: 5 (lower is better)
Translates to: TRARSGRFYSHRGRPPPSVHPWA*ALGTGK
Trigger: CTTTCCAGTTCCGAGAGCCAAGGCCCATGGATGAAC...GGATGGAGGAGGCCTTCCCCTGTGGGAATAGAATCGTCCACTCCTAGCCCTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262059.8
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CAA 90 bp AGGAGTGGACGATTCTATTCCCACAGGGGAAGGCCTCCTCCATCCCGGTTCCTCCAGGTCATTCCGTTCTaGCTGGCTCTCATCGAGCTG +
Preference number: 5 (lower is better)
Translates to: RSGRFYSHRGRPPPSRFLQVIPF*LALIEL
Trigger: CAGCTCGATGAGAGCCAGCAAGAACGGAATGACCTG...GAGGAACCGGGATGGAGGAGGCCTTCCCCTGTGGGAATAGAATCGTCCACTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CAA 90 bp GGGTTCCCAGGTTATCCTGTGCCTAATGCAGCATCCTGGCCTCTCCCACAGCGTGACCGGGAAATCCCCTaGTACTGTTCCATCAGCTCC +
Preference number: 5 (lower is better)
Translates to: GFPGYPVPNAASWPLPQRDREIP*YCSISS
Trigger: GGAGCTGATGGAACAGTACAAGGGGATTTCCCGGTC...ACGCTGTGGGAGAGGCCAGGATGCTGCATTAGGCACAGGATAACCTGGGAACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548263.5
CDS-3UTR CAA 90 bp ACGATTCTATTCCCACAGGGGAAGGCCTCCTCCATCCCGGTTCCTCCAAAACCACACATGGTCTCCCTGTaGCCGGCTCAGGATGTCCCT +
Preference number: 5 (lower is better)
Translates to: TILFPQGKASSIPVPPKPHMVSL*PAQDVP
Trigger: AGGGACATCCTGAGCCGGCAACAGGGAGACCATGTG...TGGTTTTGGAGGAACCGGGATGGAGGAGGCCTTCCCCTGTGGGAATAGAATCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CAA 90 bp ACTTGTCCCACTTTTCCATGGCATGCACCCACCCTGGGACTAAACCCTGAGCAGCACATGGTCTCCCTGTaGCCGGCTCAGGATGTCCCT +
Preference number: 5 (lower is better)
Translates to: TCPTFPWHAPTLGLNPEQHMVSL*PAQDVP
Trigger: AGGGACATCCTGAGCCGGCAACAGGGAGACCATGTG...CTGCTCAGGGTTTAGTCCCAGGGTGGGTGCATGCCATGGAAAAGTGGGACAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR CAA 90 bp TTGGGGCATCAGACAAGGGAGTGTGAGTGTGAGTGTGTGTGTGCAGTGGCTGTGTGGCTTTCTGCTGGCTaGAGGCTGCAAGCTCCTGGG +
Preference number: 5 (lower is better)
Translates to: LGHQTRECECECVCAVAVWLSAG*RLQAPG
Trigger: CCCAGGAGCTTGCAGCCTCAAGCCAGCAGAAAGCCA...CACAGCCACTGCACACACACACTCACACTCACACTCCCTTGTCTGATGCCCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CAA 90 bp GGAGTGGACGATTCTATTCCCACAGGGGAAGGCCTCCTCCATCCCGGTTCCTCCCTCAGCTTCAGGATCTaGTCCTTCTCTGCCTCCACA +
Preference number: 5 (lower is better)
Translates to: GVDDSIPTGEGLLHPGSSLSFRI*SFSAST
Trigger: TGTGGAGGCAGAGAAGGACAAGATCCTGAAGCTGAG...GGAGGAACCGGGATGGAGGAGGCCTTCCCCTGTGGGAATAGAATCGTCCACTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CAA 90 bp ACCAGGGCTAGGAGTGGACGATTCTATTCCCACAGGGGAAGGCCTCCTCCATCCTCCTCCAGGGCATCCTaGTCACTCTCAGCAGGAAAG +
Preference number: 5 (lower is better)
Translates to: TRARSGRFYSHRGRPPPSSSRAS*SLSAGK
Trigger: CTTTCCTGCTGAGAGTGACAAGGATGCCCTGGAGGA...GGATGGAGGAGGCCTTCCCCTGTGGGAATAGAATCGTCCACTCCTAGCCCTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000546443.5
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CAA 90 bp TTGGGGCATCAGACAAGGGAGTGTGAGTGTGAGTGTGTGTGTGCAGTGGCTGTGCTGAGAAGGGAGCTATaGGGTTGGAGGACGAGGGGG +
Preference number: 5 (lower is better)
Translates to: LGHQTRECECECVCAVAVLRREL*GWRTRG
Trigger: CCCCCTCGTCCTCCAACCCAATAGCTCCCTTCTCAG...CACAGCCACTGCACACACACACTCACACTCACACTCCCTTGTCTGATGCCCCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR CAA 90 bp ACCCACTCATGGCCAGCACACCAGGAGGCACGACAGGACAGTAACTGCCCAGCAGTCGGGGACCATGCTTaGGATACTGGGATAGGCAAA +
Preference number: 5 (lower is better)
Translates to: THSWPAHQEARQDSNCPAVGDHA*DTGIGK
Trigger: TTTGCCTATCCCAGTATCCAAAGCATGGTCCCCGAC...TGCTGGGCAGTTACTGTCCTGTCGTGCCTCCTGGTGTGCTGGCCATGAGTGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS GCA 90 bp CTGCCCAGTTCAGGAAGCAGTAAGTTGGCCTCCTCACCCCCACTCTaGACAGCTGCCATCAGGACTGACTTCTCATCTTCAGCCGAGTCA +
Preference number: 5 (lower is better)
Translates to: LPSSGSSKLASSPPL*TAAIRTDFSSSAES
Trigger: TGACTCGGCTGAAGATGAGAAGTCAGTCCTGATGGCAGCTGTGCAGAGTGGGGGTGAGGAGGCCAACTTACTGCTTCCTGAACTGGGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262059.8
CDS GCA 90 bp CTGGCCTTGCTGGTTGAACTCACCTGGCCATGTCATAGAAGGCACTaGCCAGTTCAGGAAGCAGTAAGTTGGCCTCCTCACCCCCACTCT +
Preference number: 5 (lower is better)
Translates to: LALLVELTWPCHRRH*PVQEAVSWPPHPHS
Trigger: AGAGTGGGGGTGAGGAGGCCAACTTACTGCTTCCTGAACTGGGCAGTGCCTTCTATGACATGGCCAGGTGAGTTCAACCAGCAAGGCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548263.5
CDS CCA 90 bp TGGCCATGTCATAGAAGGCACTGCCCAGTTCAGGAAGCAGTAAGTTaGCCTCCTCACCCCCACTCTGCACAGCTGCCATCAGGACTGACT +
Preference number: 5 (lower is better)
Translates to: WPCHRRHCPVQEAVS*PPHPHSAQLPSGLT
Trigger: AGTCAGTCCTGATGGCAGCTGTGCAGAGTGGGGGTGAGGAGGCCAACTTACTGCTTCCTGAACTGGGCAGTGCCTTCTATGACATGGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000546443.5
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CAA 90 bp ACCCACTCATGGCCAGCACACCAGGAGGCACGACAGGACAGTAACTGCCCAGCAGCTACATTGAGAAAGTaGACTCCACCACGGGATGGT +
Preference number: 5 (lower is better)
Translates to: THSWPAHQEARQDSNCPAATLRK*TPPRDG
Trigger: ACCATCCCGTGGTGGAGTCAACTTTCTCAATGTAGC...TGCTGGGCAGTTACTGTCCTGTCGTGCCTCCTGGTGTGCTGGCCATGAGTGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR CAA 90 bp GGGTTCCCAGGTTATCCTGTGCCTAATGCAGCATCCTGGCCTCTCCCACAGCGTTGGGGGAACCATCAGTaGTACTTTCAGGCACGGAAG +
Preference number: 5 (lower is better)
Translates to: GFPGYPVPNAASWPLPQRWGNHQ*YFQARK
Trigger: CTTCCGTGCCTGAAAGTACAACTGATGGTTCCCCCA...ACGCTGTGGGAGAGGCCAGGATGCTGCATTAGGCACAGGATAACCTGGGAACCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548263.5
CDS-3UTR CAA 90 bp ATCCCGGTTCCTCCAAAACCACTTTCAGGGGATAAATTCAGCCACTGCTTCCGAGCTCCTGCCTGGCAGTaGCCAGAGCCCTCTCGAGCT +
Preference number: 5 (lower is better)
Translates to: IPVPPKPLSGDKFSHCFRAPAWQ*PEPSRA
Trigger: AGCTCGAGAGGGCTCTGGCAACTGCCAGGCAGGAGC...TCGGAAGCAGTGGCTGAATTTATCCCCTGAAAGTGGTTTTGGAGGAACCGGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CAA 90 bp ACCAGGGCTAGGAGTGGACGATTCTATTCCCACAGGGGAAGGCCTCCTCCATCCCTCAGCTTCAGGATCTaGTCCTTCTCTGCCTCCACA +
Preference number: 5 (lower is better)
Translates to: TRARSGRFYSHRGRPPPSLSFRI*SFSAST
Trigger: TGTGGAGGCAGAGAAGGACAAGATCCTGAAGCTGAG...GGATGGAGGAGGCCTTCCCCTGTGGGAATAGAATCGTCCACTCCTAGCCCTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CAA 90 bp TTGGGGCATCAGACAAGGGAGTGTGAGTGTGAGTGTGTGTGTGCAGTGGCTGTGTCAGGAAGCAGTAAGTaGGCCTCCTCACCCCCACTC +
Preference number: 5 (lower is better)
Translates to: LGHQTRECECECVCAVAVSGSSK*ASSPPL
Trigger: GAGTGGGGGTGAGGAGGCCAACTTACTGCTTCCTGA...CACAGCCACTGCACACACACACTCACACTCACACTCCCTTGTCTGATGCCCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000546443.5
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CAA 90 bp TTGGGGCATCAGACAAGGGAGTGTGAGTGTGAGTGTGTGTGTGCAGTGGCTGTGCCCCAGGAATTGGCTTaGGGGCATCAGACAAGGGAG +
Preference number: 5 (lower is better)
Translates to: LGHQTRECECECVCAVAVPQELA*GHQTRE
Trigger: CTCCCTTGTCTGATGCCCCAAAGCCAATTCCTGGGG...CACAGCCACTGCACACACACACTCACACTCACACTCCCTTGTCTGATGCCCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000546443.5
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CAA 90 bp ACGATTCTATTCCCACAGGGGAAGGCCTCCTCCATCCCGGTTCCTCCAAAACCAAGGGTGCCCCAGGAATaGGCTTTGGGGCATCAGACA +
Preference number: 5 (lower is better)
Translates to: TILFPQGKASSIPVPPKPRVPQE*ALGHQT
Trigger: TGTCTGATGCCCCAAAGCCAATTCCTGGGGCACCCT...TGGTTTTGGAGGAACCGGGATGGAGGAGGCCTTCCCCTGTGGGAATAGAATCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000546443.5
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CAA 90 bp TTGGGGCATCAGACAAGGGAGTGTGAGTGTGAGTGTGTGTGTGCAGTGGCTGTGCCATTGCTGAGAGCCTaGGTGAGCGTGCAGGTCCTT +
Preference number: 5 (lower is better)
Translates to: LGHQTRECECECVCAVAVPLLRA*VSVQVL
Trigger: AAGGACCTGCACGCTCACCAAGGCTCTCAGCAATGG...CACAGCCACTGCACACACACACTCACACTCACACTCCCTTGTCTGATGCCCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR CAA 90 bp GCCCATTCAGATCTATCGGCTTTTGCATGGATGCTGGGGAGCAGGGAGGAAAGGGTCAATTACCCTTCCTaGAGCCCCCTCTGTGTCGGG +
Preference number: 5 (lower is better)
Translates to: AHSDLSAFAWMLGSREERVNYPS*SPLCVG
Trigger: CCCGACACAGAGGGGGCTCAAGGAAGGGTAATTGAC...CCTTTCCTCCCTGCTCCCCAGCATCCATGCAAAAGCCGATAGATCTGAATGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS GCA 90 bp AGCCCTGCCCGCTCCTTGCTCCATTGGCATTTTTCTTCCTTCAAGTaGAAACCGAGCTCAGCCAGCCTGCCGTTAACTTCAGCCACTTCC +
Preference number: 5 (lower is better)
Translates to: SPARSLLHWHFSSFK*KPSSASLPLTSATS
Trigger: GGAAGTGGCTGAAGTTAACGGCAGGCTGGCTGAGCTCGGTTTGCACTTGAAGGAAGAAAAATGCCAATGGAGCAAGGAGCGGGCAGGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000549613.1
ENST00000549935.6
ENST00000550804.6
ENST00000552282.1
CDS CCA 90 bp CACCTTGAAGATGCCAATCCAGTCACTGGCACTGGGCATGGTGCCTaGGGGAAGGGTGTAGTGACATTCCACCTTGGTGTTGGGGATGTA +
Preference number: 5 (lower is better)
Translates to: HLEDANPVTGTGHGA*GKGVVTFHLGVGDV
Trigger: TACATCCCCAACACCAAGGTGGAATGTCACTACACCCTTCCCCCAGGCACCATGCCCAGTGCCAGTGACTGGATTGGCATCTTCAAGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 18 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000546619.5
ENST00000547885.5
ENST00000547949.6
ENST00000547988.5
ENST00000548177.5
ENST00000548263.5
ENST00000548431.1
ENST00000549173.5
ENST00000549349.5
ENST00000549688.1
ENST00000549784.5
ENST00000549935.6
ENST00000550804.6
ENST00000551900.5
ENST00000552623.5
ENST00000553154.5
CDS CCA 90 bp CTGTCCAGCTCCACTTCCTTCGTCAGCACTTTCTCACTGATGGTCTaGATGTCATCCTCTAGCTCCAGGATGCGTGCCACATGGTCTCCC +
Preference number: 5 (lower is better)
Translates to: LSSSTSFVSTFSLMV*MSSSSSRMRATWSP
Trigger: GGGAGACCATGTGGCACGCATCCTGGAGCTAGAGGATGACATCCAGACCATCAGTGAGAAAGTGCTGACGAAGGAAGTGGAGCTGGACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000547988.5
ENST00000548263.5
ENST00000549935.6
ENST00000550804.6
CDS-3UTR CAA 90 bp GCCCATTCAGATCTATCGGCTTTTGCATGGATGCTGGGGAGCAGGGAGGAAAGGCAGGCAGCCTCCACCTaGAAGATGCCAATCCAGTCA +
Preference number: 5 (lower is better)
Translates to: AHSDLSAFAWMLGSREERQAAST*KMPIQS
Trigger: TGACTGGATTGGCATCTTCAAGGTGGAGGCTGCCTG...CCTTTCCTCCCTGCTCCCCAGCATCCATGCAAAAGCCGATAGATCTGAATGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR CAA 90 bp TGCAGTGGCTGTGTATCAGAAGCAACCAGGGCTAGGAGTGGACGATTCTATTCCGGGCAGGTAGCTGGCTaGGAACTGGACACTGGTGTG +
Preference number: 5 (lower is better)
Translates to: CSGCVSEATRARSGRFYSGQVAG*ELDTGV
Trigger: CACACCAGTGTCCAGTTCCAAGCCAGCTACCTGCCC...GGAATAGAATCGTCCACTCCTAGCCCTGGTTGCTTCTGATACACAGCCACTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262059.8
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CAA 90 bp CTGAGAACCAAAAGGGACCTGAGAGGCCATGATGTCCATGCTGCTGCCTCTGTGGTTCATCCATGGGCCTaGGCTCTCGGAACTGGAAAG +
Preference number: 5 (lower is better)
Translates to: LRTKRDLRGHDVHAAASVVHPWA*ALGTGK
Trigger: CTTTCCAGTTCCGAGAGCCAAGGCCCATGGATGAAC...CACAGAGGCAGCAGCATGGACATCATGGCCTCTCAGGTCCCTTTTGGTTCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262059.8
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CAA 90 bp CAGAAGCAACCAGGGCTAGGAGTGGACGATTCTATTCCCACAGGGGAAGGCCTCTGTAACACAGTTGCCTaGGGGACAACCAGCAGGATG +
Preference number: 5 (lower is better)
Translates to: QKQPGLGVDDSIPTGEGLCNTVA*GTTSRM
Trigger: CATCCTGCTGGTTGTCCCCAAGGCAACTGTGTTACA...GAGGCCTTCCCCTGTGGGAATAGAATCGTCCACTCCTAGCCCTGGTTGCTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CAA 90 bp GCCCATTCAGATCTATCGGCTTTTGCATGGATGCTGGGGAGCAGGGAGGAAAGGCAGGTCATTCCGTTCTaGCTGGCTCTCATCGAGCTG +
Preference number: 5 (lower is better)
Translates to: AHSDLSAFAWMLGSREERQVIPF*LALIEL
Trigger: CAGCTCGATGAGAGCCAGCAAGAACGGAATGACCTG...CCTTTCCTCCCTGCTCCCCAGCATCCATGCAAAAGCCGATAGATCTGAATGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR CAA 90 bp CTGAGAACCAAAAGGGACCTGAGAGGCCATGATGTCCATGCTGCTGCCTCTGTGCAGGTCATTCCGTTCTaGCTGGCTCTCATCGAGCTG +
Preference number: 5 (lower is better)
Translates to: LRTKRDLRGHDVHAAASVQVIPF*LALIEL
Trigger: CAGCTCGATGAGAGCCAGCAAGAACGGAATGACCTG...CACAGAGGCAGCAGCATGGACATCATGGCCTCTCAGGTCCCTTTTGGTTCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CAA 90 bp ATGAAACTGAGAACCAAAAGGGACCTGAGAGGCCATGATGTCCATGCTGCTGCCCACATGGTCTCCCTGTaGCCGGCTCAGGATGTCCCT +
Preference number: 5 (lower is better)
Translates to: MKLRTKRDLRGHDVHAAAHMVSL*PAQDVP
Trigger: AGGGACATCCTGAGCCGGCAACAGGGAGACCATGTG...GGCAGCAGCATGGACATCATGGCCTCTCAGGTCCCTTTTGGTTCTCAGTTTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CAA 90 bp GTATCAGAAGCAACCAGGGCTAGGAGTGGACGATTCTATTCCCACAGGGGAAGGCCCAAGGAGCTTCTCTaGTTCCCGAGTCAGGGCCTT +
Preference number: 5 (lower is better)
Translates to: VSEATRARSGRFYSHRGRPKELL*FPSQGL
Trigger: AAGGCCCTGACTCGGGAACAAGAGAAGCTCCTTGGG...CCTTCCCCTGTGGGAATAGAATCGTCCACTCCTAGCCCTGGTTGCTTCTGATAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CAA 90 bp TCAGAAGCAACCAGGGCTAGGAGTGGACGATTCTATTCCCACAGGGGAAGGCCTGTGATGGTTCTCCTGTaGTGCCACTTGGAGCTCAGC +
Preference number: 5 (lower is better)
Translates to: SEATRARSGRFYSHRGRPVMVLL*CHLELS
Trigger: GCTGAGCTCCAAGTGGCACAACAGGAGAACCATCAC...AGGCCTTCCCCTGTGGGAATAGAATCGTCCACTCCTAGCCCTGGTTGCTTCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262059.8
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CAA 90 bp AGGAATTGGCTTTGGGGCATCAGACAAGGGAGTGTGAGTGTGAGTGTGTGTGTGTGGCTTTCTGCTGGCTaGAGGCTGCAAGCTCCTGGG +
Preference number: 5 (lower is better)
Translates to: RNWLWGIRQGSVSVSVCVWLSAG*RLQAPG
Trigger: CCCAGGAGCTTGCAGCCTCAAGCCAGCAGAAAGCCA...CACACACACACTCACACTCACACTCCCTTGTCTGATGCCCCAAAGCCAATTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CAA 90 bp CTGAGAACCAAAAGGGACCTGAGAGGCCATGATGTCCATGCTGCTGCCTCTGTGCGGGCCAGCTCAGTCTaGAACACTTGGTTTTGGGTC +
Preference number: 5 (lower is better)
Translates to: LRTKRDLRGHDVHAAASVRASSV*NTWFWV
Trigger: GACCCAAAACCAAGTGTTCAAGACTGAGCTGGCCCG...CACAGAGGCAGCAGCATGGACATCATGGCCTCTCAGGTCCCTTTTGGTTCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CAA 90 bp ATAAATTCAGCCACTGCTTCCGAACAGGACCCCTCCCTGGGACAAAAGAGCCAGTCAGGAAGCAGTAAGTaGGCCTCCTCACCCCCACTC +
Preference number: 5 (lower is better)
Translates to: INSATASEQDPSLGQKSQSGSSK*ASSPPL
Trigger: GAGTGGGGGTGAGGAGGCCAACTTACTGCTTCCTGA...CTGGCTCTTTTGTCCCAGGGAGGGGTCCTGTTCGGAAGCAGTGGCTGAATTTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000546443.5
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CAA 90 bp AGAGAGGGTAGGGTGCCCCAGGAATTGGCTTTGGGGCATCAGACAAGGGAGTGTTCGGCAGTGGGAAACTaGTCCCACTTTTCCATGGCA +
Preference number: 5 (lower is better)
Translates to: REGRVPQELALGHQTRECSAVGN*SHFSMA
Trigger: TGCCATGGAAAAGTGGGACAAGTTTCCCACTGCCGA...ACACTCCCTTGTCTGATGCCCCAAAGCCAATTCCTGGGGCACCCTACCCTCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR CAA 90 bp CCAGACTCCCACTTGAGACAACCCACTCATGGCCAGCACACCAGGAGGCACGACCAAAGGTGTACGCTCTaGACAGGAATAAAGCCTGTC +
Preference number: 5 (lower is better)
Translates to: PDSHLRQPTHGQHTRRHDQRCTL*TGIKPV
Trigger: GACAGGCTTTATTCCTGTCAAGAGCGTACACCTTTG...GTCGTGCCTCCTGGTGTGCTGGCCATGAGTGGGTTGTCTCAAGTGGGAGTCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR CAA 90 bp GTATCAGAAGCAACCAGGGCTAGGAGTGGACGATTCTATTCCCACAGGGGAAGGTGCTTGTGCAGGCCATaGCTGAGAGCCTTGGTGAGC +
Preference number: 5 (lower is better)
Translates to: VSEATRARSGRFYSHRGRCLCRP*LRALVS
Trigger: GCTCACCAAGGCTCTCAGCAATGGCCTGCACAAGCA...CCTTCCCCTGTGGGAATAGAATCGTCCACTCCTAGCCCTGGTTGCTTCTGATAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR CAA 90 bp TCAGAAGCAACCAGGGCTAGGAGTGGACGATTCTATTCCCACAGGGGAAGGCCTAAGGGAGCTATTGGGTaGGAGGACGAGGGGGTTGTA +
Preference number: 5 (lower is better)
Translates to: SEATRARSGRFYSHRGRPKGAIG*EDEGVV
Trigger: TACAACCCCCTCGTCCTCCAACCCAATAGCTCCCTT...AGGCCTTCCCCTGTGGGAATAGAATCGTCCACTCCTAGCCCTGGTTGCTTCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR CAA 90 bp AGGGTGCCCCAGGAATTGGCTTTGGGGCATCAGACAAGGGAGTGTGAGTGTGAGAAATGGCCCCACATTTaGTGGCACCCCCAGTCTGAA +
Preference number: 5 (lower is better)
Translates to: RVPQELALGHQTRECECEKWPHI*WHPQSE
Trigger: TTCAGACTGGGGGTGCCACAAAATGTGGGGCCATTT...CTCACACTCACACTCCCTTGTCTGATGCCCCAAAGCCAATTCCTGGGGCACCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR CAA 90 bp CCAGACTCCCACTTGAGACAACCCACTCATGGCCAGCACACCAGGAGGCACGACCCTATTTGCTGCTACTaGGCTGACATCTCCTTTCAC +
Preference number: 5 (lower is better)
Translates to: PDSHLRQPTHGQHTRRHDPICCY*ADISFH
Trigger: GTGAAAGGAGATGTCAGCCAAGTAGCAGCAAATAGG...GTCGTGCCTCCTGGTGTGCTGGCCATGAGTGGGTTGTCTCAAGTGGGAGTCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR CAA 90 bp TGCAGTGGCTGTGTATCAGAAGCAACCAGGGCTAGGAGTGGACGATTCTATTCCACCTCCCTCCTGGCCTaGCTGGTTGAACTCACCTGG +
Preference number: 5 (lower is better)
Translates to: CSGCVSEATRARSGRFYSTSLLA*LVELTW
Trigger: CCAGGTGAGTTCAACCAGCAAGGCCAGGAGGGAGGT...GGAATAGAATCGTCCACTCCTAGCCCTGGTTGCTTCTGATACACAGCCACTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548263.5
CDS-3UTR CAA 90 bp CAGAAGCAACCAGGGCTAGGAGTGGACGATTCTATTCCCACAGGGGAAGGCCTCTGTTCCCTTCTTGACTaGCAGACTTCGGAGAGCAGG +
Preference number: 5 (lower is better)
Translates to: QKQPGLGVDDSIPTGEGLCSLLD*QTSESR
Trigger: CCTGCTCTCCGAAGTCTGCAAGTCAAGAAGGGAACA...GAGGCCTTCCCCTGTGGGAATAGAATCGTCCACTCCTAGCCCTGGTTGCTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548263.5
CDS GCA 90 bp TGTCCCTCCAGCTGTAGCTTCAGCTGCATCAGGTCATTCCGTTCTTaGTGGCTCTCATCGAGCTGGTTCTGTAACACAGTTGCCTTGGGG +
Preference number: 5 (lower is better)
Translates to: CPSSCSFSCIRSFRS*WLSSSWFCNTVALG
Trigger: CCCCAAGGCAACTGTGTTACAGAACCAGCTCGATGAGAGCCAGCAAGAACGGAATGACCTGATGCAGCTGAAGCTACAGCTGGAGGGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000547988.5
ENST00000548263.5
ENST00000549935.6
ENST00000550804.6
CDS CCA 90 bp TCTCCCCTTCTCTTTAGACACGCAGGCTTCTCTACAACTTGCCCTTaGAATTTCCCGTTTCCTGTTGCCAAGGGGCCTCACTCACCACCC +
Preference number: 5 (lower is better)
Translates to: SPLLFRHAGFSTTCP*NFPFPVAKGPHSPP
Trigger: GGGTGGTGAGTGAGGCCCCTTGGCAACAGGAAACGGGAAATTCCAAGGGCAAGTTGTAGAGAAGCCTGCGTGTCTAAAGAGAAGGGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000549613.1
CDS CCA 90 bp TACCTTGAAGATGCCAATCCAGTCACTGGCACTGGGCATGGTGCCTaGGGGAAGGGTGTAGTGACATTCCACCTTGGTGTTGGGGATGTA +
Preference number: 5 (lower is better)
Translates to: YLEDANPVTGTGHGA*GKGVVTFHLGVGDV
Trigger: TACATCCCCAACACCAAGGTGGAATGTCACTACACCCTTCCCCCAGGCACCATGCCCAGTGCCAGTGACTGGATTGGCATCTTCAAGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546774.1
CDS-3UTR CAA 90 bp AGAGAGGGTAGGGTGCCCCAGGAATTGGCTTTGGGGCATCAGACAAGGGAGTGTGCTACATTGAGAAAGTaGACTCCACCACGGGATGGT +
Preference number: 5 (lower is better)
Translates to: REGRVPQELALGHQTRECATLRK*TPPRDG
Trigger: ACCATCCCGTGGTGGAGTCAACTTTCTCAATGTAGC...ACACTCCCTTGTCTGATGCCCCAAAGCCAATTCCTGGGGCACCCTACCCTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CAA 90 bp TCAGAAGCAACCAGGGCTAGGAGTGGACGATTCTATTCCCACAGGGGAAGGCCTTGTAACACAGTTGCCTaGGGGACAACCAGCAGGATG +
Preference number: 5 (lower is better)
Translates to: SEATRARSGRFYSHRGRPCNTVA*GTTSRM
Trigger: CATCCTGCTGGTTGTCCCCAAGGCAACTGTGTTACA...AGGCCTTCCCCTGTGGGAATAGAATCGTCCACTCCTAGCCCTGGTTGCTTCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CAA 90 bp GTATCAGAAGCAACCAGGGCTAGGAGTGGACGATTCTATTCCCACAGGGGAAGGGACCGGGAAATCCCCTaGTACTGTTCCATCAGCTCC +
Preference number: 5 (lower is better)
Translates to: VSEATRARSGRFYSHRGRDREIP*YCSISS
Trigger: GGAGCTGATGGAACAGTACAAGGGGATTTCCCGGTC...CCTTCCCCTGTGGGAATAGAATCGTCCACTCCTAGCCCTGGTTGCTTCTGATAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CAA 90 bp TCAGAAGCAACCAGGGCTAGGAGTGGACGATTCTATTCCCACAGGGGAAGGCCTGAGCTCAGCCTCACTTaGCTCCTTGTCTGCTTGTAC +
Preference number: 5 (lower is better)
Translates to: SEATRARSGRFYSHRGRPELSLT*LLVCLY
Trigger: GTACAAGCAGACAAGGAGCAAAGTGAGGCTGAGCTC...AGGCCTTCCCCTGTGGGAATAGAATCGTCCACTCCTAGCCCTGGTTGCTTCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262059.8
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CAA 90 bp AAACTGAGAACCAAAAGGGACCTGAGAGGCCATGATGTCCATGCTGCTGCCTCTAGCACTCTGCTCCTCTaGCCAGCTCTTCGCCTCCTT +
Preference number: 5 (lower is better)
Translates to: KLRTKRDLRGHDVHAAASSTLLL*PALRLL
Trigger: AAGGAGGCGAAGAGCTGGCAAGAGGAGCAGAGTGCT...AGAGGCAGCAGCATGGACATCATGGCCTCTCAGGTCCCTTTTGGTTCTCAGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262059.8
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CAA 90 bp AGAGAGGGTAGGGTGCCCCAGGAATTGGCTTTGGGGCATCAGACAAGGGAGTGTCTTGAACACTTGGTTTaGGGTCCTCTCCTCCTGAAC +
Preference number: 5 (lower is better)
Translates to: REGRVPQELALGHQTRECLEHLV*GPLLLN
Trigger: GTTCAGGAGGAGAGGACCCAAAACCAAGTGTTCAAG...ACACTCCCTTGTCTGATGCCCCAAAGCCAATTCCTGGGGCACCCTACCCTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CAA 90 bp TCACTCTCAGCAGGAAAGCGCTCCTTACAGATAGGACACTCCTTCCATGTGGGGCGGGCCAGCTCAGTCTaGAACACTTGGTTTTGGGTC +
Preference number: 5 (lower is better)
Translates to: SLSAGKRSLQIGHSFHVGRASSV*NTWFWV
Trigger: GACCCAAAACCAAGTGTTCAAGACTGAGCTGGCCCG...CCCCACATGGAAGGAGTGTCCTATCTGTAAGGAGCGCTTTCCTGCTGAGAGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548263.5
CDS-3UTR CAA 90 bp GGAGTGGACGATTCTATTCCCACAGGGGAAGGCCTCCTCCATCCCGGTTCCTCCTGCATGAGTGTGTATTaGTGCATGTACGAGGGAGTA +
Preference number: 5 (lower is better)
Translates to: GVDDSIPTGEGLLHPGSSCMSVY*CMYEGV
Trigger: TACTCCCTCGTACATGCACAAATACACACTCATGCA...GGAGGAACCGGGATGGAGGAGGCCTTCCCCTGTGGGAATAGAATCGTCCACTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000546443.5
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CAA 90 bp AGGAATTGGCTTTGGGGCATCAGACAAGGGAGTGTGAGTGTGAGTGTGTGTGTGCCCCAGGAATTGGCTTaGGGGCATCAGACAAGGGAG +
Preference number: 5 (lower is better)
Translates to: RNWLWGIRQGSVSVSVCVPQELA*GHQTRE
Trigger: CTCCCTTGTCTGATGCCCCAAAGCCAATTCCTGGGG...CACACACACACTCACACTCACACTCCCTTGTCTGATGCCCCAAAGCCAATTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000546443.5
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CAA 90 bp AGGAATTGGCTTTGGGGCATCAGACAAGGGAGTGTGAGTGTGAGTGTGTGTGTGAGGGTGCCCCAGGAATaGGCTTTGGGGCATCAGACA +
Preference number: 5 (lower is better)
Translates to: RNWLWGIRQGSVSVSVCVRVPQE*ALGHQT
Trigger: TGTCTGATGCCCCAAAGCCAATTCCTGGGGCACCCT...CACACACACACTCACACTCACACTCCCTTGTCTGATGCCCCAAAGCCAATTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000546443.5
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CAA 90 bp TGCAGTGGCTGTGTATCAGAAGCAACCAGGGCTAGGAGTGGACGATTCTATTCCCCATTGCTGAGAGCCTaGGTGAGCGTGCAGGTCCTT +
Preference number: 5 (lower is better)
Translates to: CSGCVSEATRARSGRFYSPLLRA*VSVQVL
Trigger: AAGGACCTGCACGCTCACCAAGGCTCTCAGCAATGG...GGAATAGAATCGTCCACTCCTAGCCCTGGTTGCTTCTGATACACAGCCACTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR CAA 90 bp ACGATTCTATTCCCACAGGGGAAGGCCTCCTCCATCCCGGTTCCTCCAAAACCAAAATGGCCCCACATTTaGTGGCACCCCCAGTCTGAA +
Preference number: 5 (lower is better)
Translates to: TILFPQGKASSIPVPPKPKWPHI*WHPQSE
Trigger: TTCAGACTGGGGGTGCCACAAAATGTGGGGCCATTT...TGGTTTTGGAGGAACCGGGATGGAGGAGGCCTTCCCCTGTGGGAATAGAATCGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR CAA 90 bp CTCCAAAACCACTTTCAGGGGATAAATTCAGCCACTGCTTCCGAACAGGACCCCGTCAATTACCCTTCCTaGAGCCCCCTCTGTGTCGGG +
Preference number: 5 (lower is better)
Translates to: LQNHFQGINSATASEQDPVNYPS*SPLCVG
Trigger: CCCGACACAGAGGGGGCTCAAGGAAGGGTAATTGAC...GGGGTCCTGTTCGGAAGCAGTGGCTGAATTTATCCCCTGAAAGTGGTTTTGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR CAA 90 bp AGAGAGGGTAGGGTGCCCCAGGAATTGGCTTTGGGGCATCAGACAAGGGAGTGTAAATGGAAGGGCAAGTaGGGACAGATGGTGAAGACC +
Preference number: 5 (lower is better)
Translates to: REGRVPQELALGHQTRECKWKGK*GQMVKT
Trigger: GGTCTTCACCATCTGTCCCAACTTGCCCTTCCATTT...ACACTCCCTTGTCTGATGCCCCAAAGCCAATTCCTGGGGCACCCTACCCTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR CAA 90 bp AGGAATTGGCTTTGGGGCATCAGACAAGGGAGTGTGAGTGTGAGTGTGTGTGTGTCCTGGCCTTGCTGGTaGAACTCACCTGGCCATGTC +
Preference number: 5 (lower is better)
Translates to: RNWLWGIRQGSVSVSVCVSWPCW*NSPGHV
Trigger: GACATGGCCAGGTGAGTTCAACCAGCAAGGCCAGGA...CACACACACACTCACACTCACACTCCCTTGTCTGATGCCCCAAAGCCAATTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548263.5
CDS TCA 90 bp CGGGCCAGCTCAGTCTTGAACACTTGGTTTTGGGTCCTCTCCTCCTaGACTGCCTTCTCCAATCGAAGTATCTCTGCACTCAGCTTCAGG +
Preference number: 5 (lower is better)
Translates to: RASSVLNTWFWVLSS*TAFSNRSISALSFR
Trigger: CCTGAAGCTGAGTGCAGAGATACTTCGATTGGAGAAGGCAGTTCAGGAGGAGAGGACCCAAAACCAAGTGTTCAAGACTGAGCTGGCCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000549613.1
ENST00000549935.6
ENST00000550804.6
CDS GCA 90 bp AGCTCGGCCTCACTTTGCTCCTTGTCTGCTTGTACTTCTTTCAGTTaGCCAAGGAGCTTCTCTTGTTCCCGAGTCAGGGCCTTCACTGTG +
Preference number: 5 (lower is better)
Translates to: SSASLCSLSACTSFS*PRSFSCSRVRAFTV
Trigger: CACAGTGAAGGCCCTGACTCGGGAACAAGAGAAGCTCCTTGGGCAACTGAAAGAAGTACAAGCAGACAAGGAGCAAAGTGAGGCCGAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430117.6
CDS CCA 90 bp CTGGTTTGGGCAGGTAGCTGGCTTGGAACTGGACACTGGTGTGAATaGGGGAACCATCAGTTGTACTTTCAGGCACGGAAGACCACACAA +
Preference number: 5 (lower is better)
Translates to: LVWAGSWLGTGHWCE*GNHQLYFQARKTTQ
Trigger: TTGTGTGGTCTTCCGTGCCTGAAAGTACAACTGATGGTTCCCCCATTCACACCAGTGTCCAGTTCCAAGCCAGCTACCTGCCCAAACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000262059.8
ENST00000546619.5
ENST00000547949.6
ENST00000548177.5
ENST00000548263.5
ENST00000549349.5
ENST00000549688.1
ENST00000549784.5
ENST00000550804.6
ENST00000551900.5
ENST00000552623.5
ENST00000553154.5
CDS CCA 90 bp CACAGGCAGCCTCCACCTGTGAAAGCCCAAGGTTGGAGAAAGGTATaGTCATGGAACTACCTTCTATGGATGGAAGAAAGGGCTGAGGGG +
Preference number: 5 (lower is better)
Translates to: HRQPPPVKAQGWRKV*SWNYLLWMEERAEG
Trigger: CCCCTCAGCCCTTTCTTCCATCCATAGAAGGTAGTTCCATGACCATACCTTTCTCCAACCTTGGGCTTTCACAGGTGGAGGCTGCCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546774.1
CDS-3UTR CAA 90 bp TCAGAAGCAACCAGGGCTAGGAGTGGACGATTCTATTCCCACAGGGGAAGGCCTGCTACATTGAGAAAGTaGACTCCACCACGGGATGGT +
Preference number: 5 (lower is better)
Translates to: SEATRARSGRFYSHRGRPATLRK*TPPRDG
Trigger: ACCATCCCGTGGTGGAGTCAACTTTCTCAATGTAGC...AGGCCTTCCCCTGTGGGAATAGAATCGTCCACTCCTAGCCCTGGTTGCTTCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CAA 90 bp GGTACAGTGATGGCTGCTATGAAGGGTGAAGTTCTCGGCAGTGGGAAACTTGTCGTTCATCCATGGGCCTaGGCTCTCGGAACTGGAAAG +
Preference number: 5 (lower is better)
Translates to: GTVMAAMKGEVLGSGKLVVHPWA*ALGTGK
Trigger: CTTTCCAGTTCCGAGAGCCAAGGCCCATGGATGAAC...GACAAGTTTCCCACTGCCGAGAACTTCACCCTTCATAGCAGCCATCACTGTACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR CAA 90 bp GGTACAGTGATGGCTGCTATGAAGGGTGAAGTTCTCGGCAGTGGGAAACTTGTCCAGGTCATTCCGTTCTaGCTGGCTCTCATCGAGCTG +
Preference number: 5 (lower is better)
Translates to: GTVMAAMKGEVLGSGKLVQVIPF*LALIEL
Trigger: CAGCTCGATGAGAGCCAGCAAGAACGGAATGACCTG...GACAAGTTTCCCACTGCCGAGAACTTCACCCTTCATAGCAGCCATCACTGTACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR CAA 90 bp AAACTGAGAACCAAAAGGGACCTGAGAGGCCATGATGTCCATGCTGCTGCCTCTGACCGGGAAATCCCCTaGTACTGTTCCATCAGCTCC +
Preference number: 5 (lower is better)
Translates to: KLRTKRDLRGHDVHAAASDREIP*YCSISS
Trigger: GGAGCTGATGGAACAGTACAAGGGGATTTCCCGGTC...AGAGGCAGCAGCATGGACATCATGGCCTCTCAGGTCCCTTTTGGTTCTCAGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CAA 90 bp AAAACTCAGGTAAACCAACGGAAACTCCAAATAAGAGAGGGTAGGGTGCCCCAGCACATGGTCTCCCTGTaGCCGGCTCAGGATGTCCCT +
Preference number: 5 (lower is better)
Translates to: KTQVNQRKLQIREGRVPQHMVSL*PAQDVP
Trigger: AGGGACATCCTGAGCCGGCAACAGGGAGACCATGTG...CTGGGGCACCCTACCCTCTCTTATTTGGAGTTTCCGTTGGTTTACCTGAGTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CAA 90 bp TCACTCTCAGCAGGAAAGCGCTCCTTACAGATAGGACACTCCTTCCATGTGGGGGAGCTCAGCCTCACTTaGCTCCTTGTCTGCTTGTAC +
Preference number: 5 (lower is better)
Translates to: SLSAGKRSLQIGHSFHVGELSLT*LLVCLY
Trigger: GTACAAGCAGACAAGGAGCAAAGTGAGGCTGAGCTC...CCCCACATGGAAGGAGTGTCCTATCTGTAAGGAGCGCTTTCCTGCTGAGAGTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548263.5
CDS-3UTR CAA 90 bp GTATCAGAAGCAACCAGGGCTAGGAGTGGACGATTCTATTCCCACAGGGGAAGGGAGCTCAGCCTCACTTaGCTCCTTGTCTGCTTGTAC +
Preference number: 5 (lower is better)
Translates to: VSEATRARSGRFYSHRGRELSLT*LLVCLY
Trigger: GTACAAGCAGACAAGGAGCAAAGTGAGGCTGAGCTC...CCTTCCCCTGTGGGAATAGAATCGTCCACTCCTAGCCCTGGTTGCTTCTGATAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262059.8
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CAA 90 bp AGGAATTGGCTTTGGGGCATCAGACAAGGGAGTGTGAGTGTGAGTGTGTGTGTGGTGATGGTTCTCCTGTaGTGCCACTTGGAGCTCAGC +
Preference number: 5 (lower is better)
Translates to: RNWLWGIRQGSVSVSVCVVMVLL*CHLELS
Trigger: GCTGAGCTCCAAGTGGCACAACAGGAGAACCATCAC...CACACACACACTCACACTCACACTCCCTTGTCTGATGCCCCAAAGCCAATTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262059.8
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CAA 90 bp CTCCAAAACCACTTTCAGGGGATAAATTCAGCCACTGCTTCCGAACAGGACCCCAGCCCTGCCCGCTCCTaGCTCCATTGGCATTTTTCT +
Preference number: 5 (lower is better)
Translates to: LQNHFQGINSATASEQDPSPARS*LHWHFS
Trigger: AGAAAAATGCCAATGGAGCAAGGAGCGGGCAGGGCT...GGGGTCCTGTTCGGAAGCAGTGGCTGAATTTATCCCCTGAAAGTGGTTTTGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CAA 90 bp TTGGGGCATCAGACAAGGGAGTGTGAGTGTGAGTGTGTGTGTGCAGTGGCTGTGCTTGAACACTTGGTTTaGGGTCCTCTCCTCCTGAAC +
Preference number: 5 (lower is better)
Translates to: LGHQTRECECECVCAVAVLEHLV*GPLLLN
Trigger: GTTCAGGAGGAGAGGACCCAAAACCAAGTGTTCAAG...CACAGCCACTGCACACACACACTCACACTCACACTCCCTTGTCTGATGCCCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CAA 90 bp ACGATTCTATTCCCACAGGGGAAGGCCTCCTCCATCCCGGTTCCTCCAAAACCACTTGAACACTTGGTTTaGGGTCCTCTCCTCCTGAAC +
Preference number: 5 (lower is better)
Translates to: TILFPQGKASSIPVPPKPLEHLV*GPLLLN
Trigger: GTTCAGGAGGAGAGGACCCAAAACCAAGTGTTCAAG...TGGTTTTGGAGGAACCGGGATGGAGGAGGCCTTCCCCTGTGGGAATAGAATCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CAA 90 bp TTGAGCCCCCTCTGTGTCGGGGACCATGCTTTGGATACTGGGATAGGCAAACCACTTGAACACTTGGTTTaGGGTCCTCTCCTCCTGAAC +
Preference number: 5 (lower is better)
Translates to: LSPLCVGDHALDTGIGKPLEHLV*GPLLLN
Trigger: GTTCAGGAGGAGAGGACCCAAAACCAAGTGTTCAAG...TGGTTTGCCTATCCCAGTATCCAAAGCATGGTCCCCGACACAGAGGGGGCTCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR CAA 90 bp AAACTGAGAACCAAAAGGGACCTGAGAGGCCATGATGTCCATGCTGCTGCCTCTTCCTCCAGGGCATCCTaGTCACTCTCAGCAGGAAAG +
Preference number: 5 (lower is better)
Translates to: KLRTKRDLRGHDVHAAASSSRAS*SLSAGK
Trigger: CTTTCCTGCTGAGAGTGACAAGGATGCCCTGGAGGA...AGAGGCAGCAGCATGGACATCATGGCCTCTCAGGTCCCTTTTGGTTCTCAGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000546443.5
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CAA 90 bp CTCCAAAACCACTTTCAGGGGATAAATTCAGCCACTGCTTCCGAACAGGACCCCTCCTCCAGGGCATCCTaGTCACTCTCAGCAGGAAAG +
Preference number: 5 (lower is better)
Translates to: LQNHFQGINSATASEQDPSSRAS*SLSAGK
Trigger: CTTTCCTGCTGAGAGTGACAAGGATGCCCTGGAGGA...GGGGTCCTGTTCGGAAGCAGTGGCTGAATTTATCCCCTGAAAGTGGTTTTGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000546443.5
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CAA 90 bp TCCATCCCGGTTCCTCCAAAACCACTTTCAGGGGATAAATTCAGCCACTGCTTCCCCCAGGAATTGGCTTaGGGGCATCAGACAAGGGAG +
Preference number: 5 (lower is better)
Translates to: SIPVPPKPLSGDKFSHCFPQELA*GHQTRE
Trigger: CTCCCTTGTCTGATGCCCCAAAGCCAATTCCTGGGG...GAAGCAGTGGCTGAATTTATCCCCTGAAAGTGGTTTTGGAGGAACCGGGATGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000546443.5
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CAA 90 bp TCCATCCCGGTTCCTCCAAAACCACTTTCAGGGGATAAATTCAGCCACTGCTTCAGGGTGCCCCAGGAATaGGCTTTGGGGCATCAGACA +
Preference number: 5 (lower is better)
Translates to: SIPVPPKPLSGDKFSHCFRVPQE*ALGHQT
Trigger: TGTCTGATGCCCCAAAGCCAATTCCTGGGGCACCCT...GAAGCAGTGGCTGAATTTATCCCCTGAAAGTGGTTTTGGAGGAACCGGGATGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000546443.5
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CAA 90 bp AAACTGAGAACCAAAAGGGACCTGAGAGGCCATGATGTCCATGCTGCTGCCTCTAAGCCAGACTCCCACTaGAGACAACCCACTCATGGC +
Preference number: 5 (lower is better)
Translates to: KLRTKRDLRGHDVHAAASKPDSH*RQPTHG
Trigger: GCCATGAGTGGGTTGTCTCAAGTGGGAGTCTGGCTT...AGAGGCAGCAGCATGGACATCATGGCCTCTCAGGTCCCTTTTGGTTCTCAGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR CAA 90 bp CAGAAGCAACCAGGGCTAGGAGTGGACGATTCTATTCCCACAGGGGAAGGCCTCCAAAGGTGTACGCTCTaGACAGGAATAAAGCCTGTC +
Preference number: 5 (lower is better)
Translates to: QKQPGLGVDDSIPTGEGLQRCTL*TGIKPV
Trigger: GACAGGCTTTATTCCTGTCAAGAGCGTACACCTTTG...GAGGCCTTCCCCTGTGGGAATAGAATCGTCCACTCCTAGCCCTGGTTGCTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR CAA 90 bp TTTCAGGGGATAAATTCAGCCACTGCTTCCGAACAGGACCCCTCCCTGGGACAAGTTGTAGGCATGTGCTaGTGCAGGCCATTGCTGAGA +
Preference number: 5 (lower is better)
Translates to: FQGINSATASEQDPSLGQVVGMC*CRPLLR
Trigger: TCTCAGCAATGGCCTGCACAAGCACATGCCTACAAC...TTGTCCCAGGGAGGGGTCCTGTTCGGAAGCAGTGGCTGAATTTATCCCCTGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR CAA 90 bp TGTGTGAGTGTGTGTGTGCATGAGTGTGTATTTGTGCATGTACGAGGGAGTAAGGGGAACGGGATGGGGTaGCTAGGAGACGGAGACGTG +
Preference number: 5 (lower is better)
Translates to: CVSVCVHECVFVHVRGSKGNGMG*LGDGDV
Trigger: CACGTCTCCGTCTCCTAGCAACCCCATCCCGTTCCC...CTTACTCCCTCGTACATGCACAAATACACACTCATGCACACACACACTCACACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR CAA 90 bp GGAGTGGACGATTCTATTCCCACAGGGGAAGGCCTCCTCCATCCCGGTTCCTCCTTATCTCTAATTTCCTaGGAAGGGATTCAGGGAACG +
Preference number: 5 (lower is better)
Translates to: GVDDSIPTGEGLLHPGSSLSLIS*EGIQGT
Trigger: CGTTCCCTGAATCCCTTCCAAGGAAATTAGAGATAA...GGAGGAACCGGGATGGAGGAGGCCTTCCCCTGTGGGAATAGAATCGTCCACTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR CAA 90 bp TTTCAGGGGATAAATTCAGCCACTGCTTCCGAACAGGACCCCTCCCTGGGACAACAGATCTATCGGCTTTaGCATGGATGCTGGGGAGCA +
Preference number: 5 (lower is better)
Translates to: FQGINSATASEQDPSLGQQIYRL*HGCWGA
Trigger: TGCTCCCCAGCATCCATGCAAAAGCCGATAGATCTG...TTGTCCCAGGGAGGGGTCCTGTTCGGAAGCAGTGGCTGAATTTATCCCCTGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR CAA 90 bp ATGAAACTGAGAACCAAAAGGGACCTGAGAGGCCATGATGTCCATGCTGCTGCCGTTCATCCATGGGCCTaGGCTCTTGGAACTGGACAC +
Preference number: 5 (lower is better)
Translates to: MKLRTKRDLRGHDVHAAAVHPWA*ALGTGH
Trigger: GTGTCCAGTTCCAAGAGCCAAGGCCCATGGATGAAC...GGCAGCAGCATGGACATCATGGCCTCTCAGGTCCCTTTTGGTTCTCAGTTTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430117.6
CDS-3UTR CAA 90 bp TTGGGGCATCAGACAAGGGAGTGTGAGTGTGAGTGTGTGTGTGCAGTGGCTGTGTGCTCTGTTCCCTTCTaGACTTGCAGACTTCGGAGA +
Preference number: 5 (lower is better)
Translates to: LGHQTRECECECVCAVAVCSVPF*TCRLRR
Trigger: TCTCCGAAGTCTGCAAGTCAAGAAGGGAACAGAGCA...CACAGCCACTGCACACACACACTCACACTCACACTCCCTTGTCTGATGCCCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548263.5
CDS GCA 90 bp AGCTCAGCCTCACTTTGCTCCTTGTCTGCTTGTACTTCTTTCAGTTaGCCAAGGAGCTTCTCTTGTTCCCGAGTCAGGGCCTTCACTGTG +
Preference number: 5 (lower is better)
Translates to: SSASLCSLSACTSFS*PRSFSCSRVRAFTV
Trigger: CACAGTGAAGGCCCTGACTCGGGAACAAGAGAAGCTCCTTGGGCAACTGAAAGAAGTACAAGCAGACAAGGAGCAAAGTGAGGCTGAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000548263.5
ENST00000549935.6
ENST00000550804.6
CDS GCA 90 bp CATGTCTCTCCCCTTCTCTTTAGACACGCAGGCTTCTCTACAACTTaGCCTTGGAATTTCCCGTTTCCTGTTGCCAAGGGGCCTCACTCA +
Preference number: 5 (lower is better)
Translates to: HVSPLLFRHAGFSTT*PWNFPFPVAKGPHS
Trigger: TGAGTGAGGCCCCTTGGCAACAGGAAACGGGAAATTCCAAGGGCAAGTTGTAGAGAAGCCTGCGTGTCTAAAGAGAAGGGGAGAGACATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000549613.1
CDS CCA 90 bp GGAACTGGTAGAGCTGAGCTCCTTGGAACTGGACACTGGTGTGAATaGGGGAACCATCAGTTGTACTTTCAGGCACGGAAGACCACACAA +
Preference number: 5 (lower is better)
Translates to: GTGRAELLGTGHWCE*GNHQLYFQARKTTQ
Trigger: TTGTGTGGTCTTCCGTGCCTGAAAGTACAACTGATGGTTCCCCCATTCACACCAGTGTCCAGTTCCAAGGAGCTCAGCTCTACCAGTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547988.5
ENST00000549935.6
CDS CCA 90 bp TTTCCCCCAGAAGAAAAGGGAGGTTGGGACTCATCTCTCAAGTGGTaGAACAAAGGCTTAGGAAGAGCACACCAGGGTCTGACTGCTTCC +
Preference number: 5 (lower is better)
Translates to: FPPEEKGGWDSSLKW*NKGLGRAHQGLTAS
Trigger: GGAAGCAGTCAGACCCTGGTGTGCTCTTCCTAAGCCTTTGTTCCACCACTTGAGAGATGAGTCCCAACCTCCCTTTTCTTCTGGGGGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000547988.5
CDS-3UTR CAA 90 bp TGTGTGAGTGTGTGTGTGCATGAGTGTGTATTTGTGCATGTACGAGGGAGTAAGTTCTTCTGCGCCCTTTaGCCGCTGCGTGCTCGGATC +
Preference number: 5 (lower is better)
Translates to: CVSVCVHECVFVHVRGSKFFCAL*PLRARI
Trigger: GATCCGAGCACGCAGCGGCAAAAGGGCGCAGAAGAA...CTTACTCCCTCGTACATGCACAAATACACACTCATGCACACACACACTCACACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262059.8
CDS-3UTR CAA 90 bp ATCCCGGTTCCTCCAAAACCACTTTCAGGGGATAAATTCAGCCACTGCTTCCGACAGGCAGCCTCCACCTaGAAGATGCCAATCCAGTCA +
Preference number: 5 (lower is better)
Translates to: IPVPPKPLSGDKFSHCFRQAAST*KMPIQS
Trigger: TGACTGGATTGGCATCTTCAAGGTGGAGGCTGCCTG...TCGGAAGCAGTGGCTGAATTTATCCCCTGAAAGTGGTTTTGGAGGAACCGGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CAA 90 bp CTCCAAAACCACTTTCAGGGGATAAATTCAGCCACTGCTTCCGAACAGGACCCCTGGGGGAACCATCAGTaGTACTTTCAGGCACGGAAG +
Preference number: 5 (lower is better)
Translates to: LQNHFQGINSATASEQDPWGNHQ*YFQARK
Trigger: CTTCCGTGCCTGAAAGTACAACTGATGGTTCCCCCA...GGGGTCCTGTTCGGAAGCAGTGGCTGAATTTATCCCCTGAAAGTGGTTTTGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CAA 90 bp GTAAGATCACTCAAAGGTGAAGGGGTCCTGGGTGCTGAAAAAGAAGTGTCCATCCCCAAGGAGCTTCTCTaGTTCCCGAGTCAGGGCCTT +
Preference number: 5 (lower is better)
Translates to: VRSLKGEGVLGAEKEVSIPKELL*FPSQGL
Trigger: AAGGCCCTGACTCGGGAACAAGAGAAGCTCCTTGGG...GATGGACACTTCTTTTTCAGCACCCAGGACCCCTTCACCTTTGAGTGATCTTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000548263.5
CDS-3UTR CAA 90 bp TGTGTGAGTGTGTGTGTGCATGAGTGTGTATTTGTGCATGTACGAGGGAGTAAGTGGCTTTCTGCTGGCTaGAGGCTGCAAGCTCCTGGG +
Preference number: 5 (lower is better)
Translates to: CVSVCVHECVFVHVRGSKWLSAG*RLQAPG
Trigger: CCCAGGAGCTTGCAGCCTCAAGCCAGCAGAAAGCCA...CTTACTCCCTCGTACATGCACAAATACACACTCATGCACACACACACTCACACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CAA 90 bp CTCCAAAACCACTTTCAGGGGATAAATTCAGCCACTGCTTCCGAACAGGACCCCCTCAGCTTCAGGATCTaGTCCTTCTCTGCCTCCACA +
Preference number: 5 (lower is better)
Translates to: LQNHFQGINSATASEQDPLSFRI*SFSAST
Trigger: TGTGGAGGCAGAGAAGGACAAGATCCTGAAGCTGAG...GGGGTCCTGTTCGGAAGCAGTGGCTGAATTTATCCCCTGAAAGTGGTTTTGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CAA 90 bp GTTCCTCCAAAACCACTTTCAGGGGATAAATTCAGCCACTGCTTCCGAACAGGATCAGGAAGCAGTAAGTaGGCCTCCTCACCCCCACTC +
Preference number: 5 (lower is better)
Translates to: VPPKPLSGDKFSHCFRTGSGSSK*ASSPPL
Trigger: GAGTGGGGGTGAGGAGGCCAACTTACTGCTTCCTGA...TCCTGTTCGGAAGCAGTGGCTGAATTTATCCCCTGAAAGTGGTTTTGGAGGAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000546443.5
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CAA 90 bp AAAACTCAGGTAAACCAACGGAAACTCCAAATAAGAGAGGGTAGGGTGCCCCAGTCAGGAAGCAGTAAGTaGGCCTCCTCACCCCCACTC +
Preference number: 5 (lower is better)
Translates to: KTQVNQRKLQIREGRVPQSGSSK*ASSPPL
Trigger: GAGTGGGGGTGAGGAGGCCAACTTACTGCTTCCTGA...CTGGGGCACCCTACCCTCTCTTATTTGGAGTTTCCGTTGGTTTACCTGAGTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000546443.5
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CAA 90 bp TCCATCCCGGTTCCTCCAAAACCACTTTCAGGGGATAAATTCAGCCACTGCTTCTCCTCCAGGGCATCCTaGTCACTCTCAGCAGGAAAG +
Preference number: 5 (lower is better)
Translates to: SIPVPPKPLSGDKFSHCFSSRAS*SLSAGK
Trigger: CTTTCCTGCTGAGAGTGACAAGGATGCCCTGGAGGA...GAAGCAGTGGCTGAATTTATCCCCTGAAAGTGGTTTTGGAGGAACCGGGATGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000546443.5
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CAA 90 bp TCCATCCCGGTTCCTCCAAAACCACTTTCAGGGGATAAATTCAGCCACTGCTTCAAGCCAGACTCCCACTaGAGACAACCCACTCATGGC +
Preference number: 5 (lower is better)
Translates to: SIPVPPKPLSGDKFSHCFKPDSH*RQPTHG
Trigger: GCCATGAGTGGGTTGTCTCAAGTGGGAGTCTGGCTT...GAAGCAGTGGCTGAATTTATCCCCTGAAAGTGGTTTTGGAGGAACCGGGATGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR CAA 90 bp GGTACAGTGATGGCTGCTATGAAGGGTGAAGTTCTCGGCAGTGGGAAACTTGTCGTTGTAGGCATGTGCTaGTGCAGGCCATTGCTGAGA +
Preference number: 5 (lower is better)
Translates to: GTVMAAMKGEVLGSGKLVVVGMC*CRPLLR
Trigger: TCTCAGCAATGGCCTGCACAAGCACATGCCTACAAC...GACAAGTTTCCCACTGCCGAGAACTTCACCCTTCATAGCAGCCATCACTGTACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR CAA 90 bp AGGAGTGGACGATTCTATTCCCACAGGGGAAGGCCTCCTCCATCCCGGTTCCTCTTATCTCTAATTTCCTaGGAAGGGATTCAGGGAACG +
Preference number: 5 (lower is better)
Translates to: RSGRFYSHRGRPPPSRFLLSLIS*EGIQGT
Trigger: CGTTCCCTGAATCCCTTCCAAGGAAATTAGAGATAA...GAGGAACCGGGATGGAGGAGGCCTTCCCCTGTGGGAATAGAATCGTCCACTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR CAA 90 bp CGATTCTATTCCCACAGGGGAAGGCCTCCTCCATCCCGGTTCCTCCAAAACCACTACTATTCTCCTTTTTaGCACAAGGCAGCCACTCAC +
Preference number: 5 (lower is better)
Translates to: RFYSHRGRPPPSRFLQNHYYSPF*HKAATH
Trigger: GTGAGTGGCTGCCTTGTGCAAAAAAGGAGAATAGTA...GTGGTTTTGGAGGAACCGGGATGGAGGAGGCCTTCCCCTGTGGGAATAGAATCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR CAA 90 bp AGAGAGGGTAGGGTGCCCCAGGAATTGGCTTTGGGGCATCAGACAAGGGAGTGTTACTATTCTCCTTTTTaGCACAAGGCAGCCACTCAC +
Preference number: 5 (lower is better)
Translates to: REGRVPQELALGHQTRECYYSPF*HKAATH
Trigger: GTGAGTGGCTGCCTTGTGCAAAAAAGGAGAATAGTA...ACACTCCCTTGTCTGATGCCCCAAAGCCAATTCCTGGGGCACCCTACCCTCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR CAA 90 bp CTCCAAAACCACTTTCAGGGGATAAATTCAGCCACTGCTTCCGAACAGGACCCCGTCGGGGACCATGCTTaGGATACTGGGATAGGCAAA +
Preference number: 5 (lower is better)
Translates to: LQNHFQGINSATASEQDPVGDHA*DTGIGK
Trigger: TTTGCCTATCCCAGTATCCAAAGCATGGTCCCCGAC...GGGGTCCTGTTCGGAAGCAGTGGCTGAATTTATCCCCTGAAAGTGGTTTTGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR CAA 90 bp AAACTGAGAACCAAAAGGGACCTGAGAGGCCATGATGTCCATGCTGCTGCCTCTGGGGGAGTGGTGTGTTaGGATTCGTTCTTTCACCAC +
Preference number: 5 (lower is better)
Translates to: KLRTKRDLRGHDVHAAASGGVVC*DSFFHH
Trigger: GTGGTGAAAGAACGAATCCAAACACACCACTCCCCC...AGAGGCAGCAGCATGGACATCATGGCCTCTCAGGTCCCTTTTGGTTCTCAGTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS TCA 90 bp CCACACAAATGTGTGGTAATCCCGAACACAGGCAGCCTCCACCTGTaGAAGCCCAAGGTTGGAGAAAGGTATGGTCATGGAACTACCTTC +
Preference number: 5 (lower is better)
Translates to: PHKCVVIPNTGSLHL*KPKVGERYGHGTTF
Trigger: GAAGGTAGTTCCATGACCATACCTTTCTCCAACCTTGGGCTTTCACAGGTGGAGGCTGCCTGTGTTCGGGATTACCACACATTTGTGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546774.1
CDS CCA 90 bp AAGTTTCCCCCAGAAGAAAAGGGAGGTTGGGACTCATCTCTCAAGTaGTGGAACAAAGGCTTAGGAAGAGCACACCAGGGTCTGACTGCT +
Preference number: 5 (lower is better)
Translates to: KFPPEEKGGWDSSLK*WNKGLGRAHQGLTA
Trigger: AGCAGTCAGACCCTGGTGTGCTCTTCCTAAGCCTTTGTTCCACCACTTGAGAGATGAGTCCCAACCTCCCTTTTCTTCTGGGGGAAACTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000547988.5
CDS-3UTR CAA 90 bp TCCATCCCGGTTCCTCCAAAACCACTTTCAGGGGATAAATTCAGCCACTGCTTCTGTAACACAGTTGCCTaGGGGACAACCAGCAGGATG +
Preference number: 5 (lower is better)
Translates to: SIPVPPKPLSGDKFSHCFCNTVA*GTTSRM
Trigger: CATCCTGCTGGTTGTCCCCAAGGCAACTGTGTTACA...GAAGCAGTGGCTGAATTTATCCCCTGAAAGTGGTTTTGGAGGAACCGGGATGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CAA 90 bp CTGAGAACCAAAAGGGACCTGAGAGGCCATGATGTCCATGCTGCTGCCTCTGTGTTGTACTTCTTTCAGTaGCCCAAGGAGCTTCTCTTG +
Preference number: 5 (lower is better)
Translates to: LRTKRDLRGHDVHAAASVLYFFQ*PKELLL
Trigger: CAAGAGAAGCTCCTTGGGCAACTGAAAGAAGTACAA...CACAGAGGCAGCAGCATGGACATCATGGCCTCTCAGGTCCCTTTTGGTTCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CAA 90 bp ACGATTCTATTCCCACAGGGGAAGGCCTCCTCCATCCCGGTTCCTCCAAAACCATTGTACTTCTTTCAGTaGCCCAAGGAGCTTCTCTTG +
Preference number: 5 (lower is better)
Translates to: TILFPQGKASSIPVPPKPLYFFQ*PKELLL
Trigger: CAAGAGAAGCTCCTTGGGCAACTGAAAGAAGTACAA...TGGTTTTGGAGGAACCGGGATGGAGGAGGCCTTCCCCTGTGGGAATAGAATCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CAA 90 bp TCCATCCCGGTTCCTCCAAAACCACTTTCAGGGGATAAATTCAGCCACTGCTTCCTCAGCTTCAGGATCTaGTCCTTCTCTGCCTCCACA +
Preference number: 5 (lower is better)
Translates to: SIPVPPKPLSGDKFSHCFLSFRI*SFSAST
Trigger: TGTGGAGGCAGAGAAGGACAAGATCCTGAAGCTGAG...GAAGCAGTGGCTGAATTTATCCCCTGAAAGTGGTTTTGGAGGAACCGGGATGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CAA 90 bp TCAGAAGCAACCAGGGCTAGGAGTGGACGATTCTATTCCCACAGGGGAAGGCCTTGCATGAGTGTGTATTaGTGCATGTACGAGGGAGTA +
Preference number: 5 (lower is better)
Translates to: SEATRARSGRFYSHRGRPCMSVY*CMYEGV
Trigger: TACTCCCTCGTACATGCACAAATACACACTCATGCA...AGGCCTTCCCCTGTGGGAATAGAATCGTCCACTCCTAGCCCTGGTTGCTTCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000546443.5
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CAA 90 bp CAGAAAGAGGAACCAATGAAACTGAGAACCAAAAGGGACCTGAGAGGCCATGATCCCCAGGAATTGGCTTaGGGGCATCAGACAAGGGAG +
Preference number: 5 (lower is better)
Translates to: QKEEPMKLRTKRDLRGHDPQELA*GHQTRE
Trigger: CTCCCTTGTCTGATGCCCCAAAGCCAATTCCTGGGG...ATCATGGCCTCTCAGGTCCCTTTTGGTTCTCAGTTTCATTGGTTCCTCTTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000546443.5
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CAA 90 bp CAGAAAGAGGAACCAATGAAACTGAGAACCAAAAGGGACCTGAGAGGCCATGATAGGGTGCCCCAGGAATaGGCTTTGGGGCATCAGACA +
Preference number: 5 (lower is better)
Translates to: QKEEPMKLRTKRDLRGHDRVPQE*ALGHQT
Trigger: TGTCTGATGCCCCAAAGCCAATTCCTGGGGCACCCT...ATCATGGCCTCTCAGGTCCCTTTTGGTTCTCAGTTTCATTGGTTCCTCTTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000546443.5
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CAA 90 bp ATCCCGGTTCCTCCAAAACCACTTTCAGGGGATAAATTCAGCCACTGCTTCCGAGGGGGAGTGGTGTGTTaGGATTCGTTCTTTCACCAC +
Preference number: 5 (lower is better)
Translates to: IPVPPKPLSGDKFSHCFRGGVVC*DSFFHH
Trigger: GTGGTGAAAGAACGAATCCAAACACACCACTCCCCC...TCGGAAGCAGTGGCTGAATTTATCCCCTGAAAGTGGTTTTGGAGGAACCGGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR CAA 90 bp TGTGTATCAGAAGCAACCAGGGCTAGGAGTGGACGATTCTATTCCCACAGGGGAAAATGGAAGGGCAAGTaGGGACAGATGGTGAAGACC +
Preference number: 5 (lower is better)
Translates to: CVSEATRARSGRFYSHRGKWKGK*GQMVKT
Trigger: GGTCTTCACCATCTGTCCCAACTTGCCCTTCCATTT...TCCCCTGTGGGAATAGAATCGTCCACTCCTAGCCCTGGTTGCTTCTGATACACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR CAA 90 bp TCCATCCCGGTTCCTCCAAAACCACTTTCAGGGGATAAATTCAGCCACTGCTTCCTGTATCTCCTTTTCTaGGCTGAGGCCAAGAAGGGC +
Preference number: 5 (lower is better)
Translates to: SIPVPPKPLSGDKFSHCFLYLLF*AEAKKG
Trigger: GCCCTTCTTGGCCTCAGCCAAGAAAAGGAGATACAG...GAAGCAGTGGCTGAATTTATCCCCTGAAAGTGGTTTTGGAGGAACCGGGATGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000548263.5
CDS TCA 90 bp CCCAATTTTCCATCTTCCCTTGTACCTTGGAACTGGACACTGGTGTaGATGGGGGAACCATCAGTTGTACTTTCAGGCACGGAAGACCAC +
Preference number: 5 (lower is better)
Translates to: PNFPSSLVPWNWTLV*MGEPSVVLSGTEDH
Trigger: GTGGTCTTCCGTGCCTGAAAGTACAACTGATGGTTCCCCCATTCACACCAGTGTCCAGTTCCAAGGTACAAGGGAAGATGGAAAATTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000546774.1
ENST00000548431.1
ENST00000549173.5
CDS TCA 90 bp CAGGGGACTAGATGCCCTCTGAAGTTCCTTCTGTTTCTATGTCCCTaGTTCTGCGATAATCCCGTGATTCTCTATCCGCTGAGCGCTGTT +
Preference number: 5 (lower is better)
Translates to: QGTRCPLKFLLFLCP*FCDNPVILYPLSAV
Trigger: AACAGCGCTCAGCGGATAGAGAATCACGGGATTATCGCAGAATCAGGGACATAGAAACAGAAGGAACTTCAGAGGGCATCTAGTCCCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548431.1
CDS CCA 90 bp CAGCCTCCACCTGTGAAAGCCCAAGGTTGGAGAAAGGTATGGTCATaGAACTACCTTCTATGGATGGAAGAAAGGGCTGAGGGGTTGAAT +
Preference number: 5 (lower is better)
Translates to: QPPPVKAQGWRKVWS*NYLLWMEERAEGLN
Trigger: ATTCAACCCCTCAGCCCTTTCTTCCATCCATAGAAGGTAGTTCCATGACCATACCTTTCTCCAACCTTGGGCTTTCACAGGTGGAGGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546774.1
CDS CCA 90 bp GGTAATCCCGAACACAGGCAGCCTCCACCTGTGAAAGCCCAAGGTTaGAGAAAGGTATGGTCATGGAACTACCTTCTATGGATGGAAGAA +
Preference number: 5 (lower is better)
Translates to: GNPEHRQPPPVKAQG*RKVWSWNYLLWMEE
Trigger: TTCTTCCATCCATAGAAGGTAGTTCCATGACCATACCTTTCTCCAACCTTGGGCTTTCACAGGTGGAGGCTGCCTGTGTTCGGGATTACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546774.1
CDS-3UTR CAA 90 bp CAGAAAGAGGAACCAATGAAACTGAGAACCAAAAGGGACCTGAGAGGCCATGATCAGGCAGCCTCCACCTaGAAGATGCCAATCCAGTCA +
Preference number: 5 (lower is better)
Translates to: QKEEPMKLRTKRDLRGHDQAAST*KMPIQS
Trigger: TGACTGGATTGGCATCTTCAAGGTGGAGGCTGCCTG...ATCATGGCCTCTCAGGTCCCTTTTGGTTCTCAGTTTCATTGGTTCCTCTTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CAA 90 bp ATGAAACTGAGAACCAAAAGGGACCTGAGAGGCCATGATGTCCATGCTGCTGCCTTGCTCCTTGTCTGCTaGTACTTCTTTCAGTTGCCC +
Preference number: 5 (lower is better)
Translates to: MKLRTKRDLRGHDVHAAALLLVC*YFFQLP
Trigger: GGGCAACTGAAAGAAGTACAAGCAGACAAGGAGCAA...GGCAGCAGCATGGACATCATGGCCTCTCAGGTCCCTTTTGGTTCTCAGTTTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CAA 90 bp TGTGTGAGTGTGTGTGTGCATGAGTGTGTATTTGTGCATGTACGAGGGAGTAAGAGCCCTGCCCGCTCCTaGCTCCATTGGCATTTTTCT +
Preference number: 5 (lower is better)
Translates to: CVSVCVHECVFVHVRGSKSPARS*LHWHFS
Trigger: AGAAAAATGCCAATGGAGCAAGGAGCGGGCAGGGCT...CTTACTCCCTCGTACATGCACAAATACACACTCATGCACACACACACTCACACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CAA 90 bp TGTGTATCAGAAGCAACCAGGGCTAGGAGTGGACGATTCTATTCCCACAGGGGACCTATTTGCTGCTACTaGGCTGACATCTCCTTTCAC +
Preference number: 5 (lower is better)
Translates to: CVSEATRARSGRFYSHRGPICCY*ADISFH
Trigger: GTGAAAGGAGATGTCAGCCAAGTAGCAGCAAATAGG...TCCCCTGTGGGAATAGAATCGTCCACTCCTAGCCCTGGTTGCTTCTGATACACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS GCA 90 bp CAGCTCAGTCTTGAACACTTGGTTTTGGGTCCTCTCCTCCTGAACTaGCTTCTCCAATCGAAGTATCTCTGCACTCAGCTTCAGGATCTT +
Preference number: 5 (lower is better)
Translates to: QLSLEHLVLGPLLLN*LLQSKYLCTQLQDL
Trigger: AAGATCCTGAAGCTGAGTGCAGAGATACTTCGATTGGAGAAGGCAGTTCAGGAGGAGAGGACCCAAAACCAAGTGTTCAAGACTGAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000549613.1
ENST00000549935.6
ENST00000550804.6
CDS-3UTR CAA 90 bp TGTGTGAGTGTGTGTGTGCATGAGTGTGTATTTGTGCATGTACGAGGGAGTAAGTGGGGGAACCATCAGTaGTACTTTCAGGCACGGAAG +
Preference number: 5 (lower is better)
Translates to: CVSVCVHECVFVHVRGSKWGNHQ*YFQARK
Trigger: CTTCCGTGCCTGAAAGTACAACTGATGGTTCCCCCA...CTTACTCCCTCGTACATGCACAAATACACACTCATGCACACACACACTCACACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CAA 90 bp CTGACATCTCCTTTCACATTAGAGTCTCAAGCCCATTCAGATCTATCGGCTTTTCCCAAGGAGCTTCTCTaGTTCCCGAGTCAGGGCCTT +
Preference number: 5 (lower is better)
Translates to: LTSPFTLESQAHSDLSAFPKELL*FPSQGL
Trigger: AAGGCCCTGACTCGGGAACAAGAGAAGCTCCTTGGG...AAAAGCCGATAGATCTGAATGGGCTTGAGACTCTAATGTGAAAGGAGATGTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262059.8
ENST00000550804.6
CDS-3UTR CAA 90 bp AGGAATTGGCTTTGGGGCATCAGACAAGGGAGTGTGAGTGTGAGTGTGTGTGTGTTGTACTTCTTTCAGTaGCCCAAGGAGCTTCTCTTG +
Preference number: 5 (lower is better)
Translates to: RNWLWGIRQGSVSVSVCVLYFFQ*PKELLL
Trigger: CAAGAGAAGCTCCTTGGGCAACTGAAAGAAGTACAA...CACACACACACTCACACTCACACTCCCTTGTCTGATGCCCCAAAGCCAATTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CAA 90 bp ATGAAACTGAGAACCAAAAGGGACCTGAGAGGCCATGATGTCCATGCTGCTGCCTGCATGAGTGTGTATTaGTGCATGTACGAGGGAGTA +
Preference number: 5 (lower is better)
Translates to: MKLRTKRDLRGHDVHAAACMSVY*CMYEGV
Trigger: TACTCCCTCGTACATGCACAAATACACACTCATGCA...GGCAGCAGCATGGACATCATGGCCTCTCAGGTCCCTTTTGGTTCTCAGTTTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000546443.5
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CAA 90 bp TGTGTATCAGAAGCAACCAGGGCTAGGAGTGGACGATTCTATTCCCACAGGGGATGCATGAGTGTGTATTaGTGCATGTACGAGGGAGTA +
Preference number: 5 (lower is better)
Translates to: CVSEATRARSGRFYSHRGCMSVY*CMYEGV
Trigger: TACTCCCTCGTACATGCACAAATACACACTCATGCA...TCCCCTGTGGGAATAGAATCGTCCACTCCTAGCCCTGGTTGCTTCTGATACACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000546443.5
ENST00000548263.5
ENST00000550804.6
CDS-3UTR CAA 90 bp AGGAATTGGCTTTGGGGCATCAGACAAGGGAGTGTGAGTGTGAGTGTGTGTGTGTGCATGAGTGTGTATTaGTGCATGTACGAGGGAGTA +
Preference number: 5 (lower is better)
Translates to: RNWLWGIRQGSVSVSVCVCMSVY*CMYEGV
Trigger: TACTCCCTCGTACATGCACAAATACACACTCATGCA...CACACACACACTCACACTCACACTCCCTTGTCTGATGCCCCAAAGCCAATTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262059.8
ENST00000430117.6
ENST00000546443.5
ENST00000548263.5
ENST00000550804.6
CDS CCA 90 bp ATTTTCCATCTTCCCTTGTACCTTGGAACTGGACACTGGTGTGAATaGGGGAACCATCAGTTGTACTTTCAGGCACGGAAGACCACACAA +
Preference number: 5 (lower is better)
Translates to: IFHLPLYLGTGHWCE*GNHQLYFQARKTTQ
Trigger: TTGTGTGGTCTTCCGTGCCTGAAAGTACAACTGATGGTTCCCCCATTCACACCAGTGTCCAGTTCCAAGGTACAAGGGAAGATGGAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000546774.1