RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CALB2 (Homo sapiens)

Ensembl gene IDs: ENSG00000172137

Ensembl transcript IDs: ENST00000302628.9, ENST00000349553.9, ENST00000467817.1, ENST00000490520.1, ENST00000562305.5, ENST00000634226.1, ENST00000634959.1, ENST00000635154.1, ENST00000635371.2, ENST00000635576.1

Found 240 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGACAGCTACACCATTGGCAAGGTGGTGGATGGAACCTGGAAGTTTaGGGTGGGTGGTGGCATGGGGGACCGGCAGAGGGGAGCGAGAGG +
Preference number: 1 (lower is better)
Translates to: GQLHHWQGGGWNLEV*GGWWHGGPAEGSER
Trigger: CCTCTCGCTCCCCTCTGCCGGTCCCCCATGCCACCACCCACCCCAAACTTCCAGGTTCCATCCACCACCTTGCCAATGGTGTAGCTGTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
3UTR CCA 90 bp ACAGGAGTTCTGAGAGGACAGCTACACCATTGGCAAGGTGGTGGATaGAACCTGGAAGTTTGGGGTGGGTGGTGGCATGGGGGACCGGCA +
Preference number: 1 (lower is better)
Translates to: TGVLRGQLHHWQGGG*NLEVWGGWWHGGPA
Trigger: TGCCGGTCCCCCATGCCACCACCCACCCCAAACTTCCAGGTTCCATCCACCACCTTGCCAATGGTGTAGCTGTCCTCTCAGAACTCCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
3UTR CCA 90 bp ACACACAGGAGTTCTGAGAGGACAGCTACACCATTGGCAAGGTGGTaGATGGAACCTGGAAGTTTGGGGTGGGTGGTGGCATGGGGGACC +
Preference number: 1 (lower is better)
Translates to: THRSSERTATPLARW*MEPGSLGWVVAWGT
Trigger: GGTCCCCCATGCCACCACCCACCCCAAACTTCCAGGTTCCATCCACCACCTTGCCAATGGTGTAGCTGTCCTCTCAGAACTCCTGTGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
3UTR CCA 90 bp GGGTGCCTTCCACACACAGGAGTTCTGAGAGGACAGCTACACCATTaGCAAGGTGGTGGATGGAACCTGGAAGTTTGGGGTGGGTGGTGG +
Preference number: 1 (lower is better)
Translates to: GCLPHTGVLRGQLHH*QGGGWNLEVWGGWW
Trigger: CCACCACCCACCCCAAACTTCCAGGTTCCATCCACCACCTTGCCAATGGTGTAGCTGTCCTCTCAGAACTCCTGTGTGTGGAAGGCACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
3UTR GCA 90 bp CTCGCTGCAGAGCACAATCTCCAGGTCCTTGCGGTAGAGCTTCCCTaGCTCTGCCAAGGACATGACGCTCTTTCTGTAGTTGGTGAGCTG +
Preference number: 1 (lower is better)
Translates to: LAAEHNLQVLAVELP*LCQGHDALSVVGEL
Trigger: CAGCTCACCAACTACAGAAAGAGCGTCATGTCCTTGGCAGAGGCAGGGAAGCTCTACCGCAAGGACCTGGAGATTGTGCTCTGCAGCGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349553.9
ENST00000635154.1
3UTR TCA 90 bp AAAGAAGGCAAGGAAAGGGCGGGTGCCTTCCACACACAGGAGTTCTaGGAGGACAGCTACACCATTGGCAAGGTGGTGGATGGAACCTGG +
Preference number: 1 (lower is better)
Translates to: KEGKERAGAFHTQEF*EDSYTIGKVVDGTW
Trigger: CCAGGTTCCATCCACCACCTTGCCAATGGTGTAGCTGTCCTCTCAGAACTCCTGTGTGTGGAAGGCACCCGCCCTTTCCTTGCCTTCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
3UTR GCA 90 bp GCAGAGCACAATCTCCAGGTCCTTGCGGTAGAGCTTCCCTGCCTCTaGCAAGGACATGACGCTCTTTCTGTAGTTGGTGAGCTGTTGAAT +
Preference number: 1 (lower is better)
Translates to: AEHNLQVLAVELPCL*QGHDALSVVGELLN
Trigger: ATTCAACAGCTCACCAACTACAGAAAGAGCGTCATGTCCTTGGCAGAGGCAGGGAAGCTCTACCGCAAGGACCTGGAGATTGTGCTCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349553.9
ENST00000635154.1
3UTR-3UTR CCA 90 bp CATGCCCCCATCACCTTCCATGTGTGTGATCCACTGAGCAAAGACTGCCTGGGCAGGGTTTGGGGGAGGTaGAGAAGCAGCCCCCGTCCC +
Preference number: 2 (lower is better)
Translates to: HAPITFHVCDPLSKDCLGRVWGR*RSSPRP
Trigger: GGGACGGGGGCTGCTTCTCCACCTCCCCCAAACCCT...GCCCAGGCAGTCTTTGCTCAGTGGATCACACACATGGAAGGTGATGGGGGCATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
3UTR-3UTR CCA 90 bp GGAAAGGGCGGGTGCCTTCCACACACAGGAGTTCTGAGAGGACAGCTACACCATAGGGTTTGGGGGAGGTaGAGAAGCAGCCCCCGTCCC +
Preference number: 2 (lower is better)
Translates to: GKGGCLPHTGVLRGQLHHRVWGR*RSSPRP
Trigger: GGGACGGGGGCTGCTTCTCCACCTCCCCCAAACCCT...ATGGTGTAGCTGTCCTCTCAGAACTCCTGTGTGTGGAAGGCACCCGCCCTTTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
3UTR-3UTR CCA 90 bp GGAAAGGGCGGGTGCCTTCCACACACAGGAGTTCTGAGAGGACAGCTACACCATGTTTGGGGTGGGTGGTaGCATGGGGGACCGGCAGAG +
Preference number: 2 (lower is better)
Translates to: GKGGCLPHTGVLRGQLHHVWGGW*HGGPAE
Trigger: CTCTGCCGGTCCCCCATGCCACCACCCACCCCAAAC...ATGGTGTAGCTGTCCTCTCAGAACTCCTGTGTGTGGAAGGCACCCGCCCTTTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
3UTR-3UTR CCA 90 bp AAGAAGGCAAGGAAAGGGCGGGTGCCTTCCACACACAGGAGTTCTGAGAGGACAGTTTGGGGTGGGTGGTaGCATGGGGGACCGGCAGAG +
Preference number: 2 (lower is better)
Translates to: KKARKGRVPSTHRSSERTVWGGW*HGGPAE
Trigger: CTCTGCCGGTCCCCCATGCCACCACCCACCCCAAAC...TGTCCTCTCAGAACTCCTGTGTGTGGAAGGCACCCGCCCTTTCCTTGCCTTCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
3UTR-3UTR TCA 90 bp AGGCAAGGAAAGGGCGGGTGCCTTCCACACACAGGAGTTCTGAGAGGACAGCTAGGCGCTCACGGTCTCTaGGTCTGGGTAGACGCATCA +
Preference number: 2 (lower is better)
Translates to: RQGKGGCLPHTGVLRGQLGAHGL*VWVDAS
Trigger: TGATGCGTCTACCCAGACTCAGAGACCGTGAGCGCC...TAGCTGTCCTCTCAGAACTCCTGTGTGTGGAAGGCACCCGCCCTTTCCTTGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
3UTR-3UTR CCA 90 bp CGAGGGAGCTCATGCATCACAGCGAAGAGAATTAGGGACCCTCCACCCATGCCCAGCAGAAGCAGGGTTTaGGGGAGGTGGAGAAGCAGC +
Preference number: 2 (lower is better)
Translates to: RGSSCITAKRIRDPPPMPSRSRV*GRWRSS
Trigger: GCTGCTTCTCCACCTCCCCCAAACCCTGCTTCTGCT...GGGCATGGGTGGAGGGTCCCTAATTCTCTTCGCTGTGATGCATGAGCTCCCTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
3UTR-3UTR CCA 90 bp AGCACGCCGAGTAAAGAAGGCAAGGAAAGGGCGGGTGCCTTCCACACACAGGAGAGCAGAAGCAGGGTTTaGGGGAGGTGGAGAAGCAGC +
Preference number: 2 (lower is better)
Translates to: STPSKEGKERAGAFHTQESRSRV*GRWRSS
Trigger: GCTGCTTCTCCACCTCCCCCAAACCCTGCTTCTGCT...CTCCTGTGTGTGGAAGGCACCCGCCCTTTCCTTGCCTTCTTTACTCGGCGTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
3UTR-3UTR CCA 90 bp AGGCAAGGAAAGGGCGGGTGCCTTCCACACACAGGAGTTCTGAGAGGACAGCTACGTCCCCACTTTACATaGGGGGCTCGCTGCAGAGCA +
Preference number: 2 (lower is better)
Translates to: RQGKGGCLPHTGVLRGQLRPHFT*GARCRA
Trigger: TGCTCTGCAGCGAGCCCCCCATGTAAAGTGGGGACG...TAGCTGTCCTCTCAGAACTCCTGTGTGTGGAAGGCACCCGCCCTTTCCTTGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349553.9
ENST00000635154.1
3UTR-3UTR CCA 90 bp GGAAAGGGCGGGTGCCTTCCACACACAGGAGTTCTGAGAGGACAGCTACACCATCGTCCCCACTTTACATaGGGGGCTCGCTGCAGAGCA +
Preference number: 2 (lower is better)
Translates to: GKGGCLPHTGVLRGQLHHRPHFT*GARCRA
Trigger: TGCTCTGCAGCGAGCCCCCCATGTAAAGTGGGGACG...ATGGTGTAGCTGTCCTCTCAGAACTCCTGTGTGTGGAAGGCACCCGCCCTTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349553.9
ENST00000635154.1
3UTR CAA 90 bp CGGGTGCCTTCCACACACAGGAGTTCTGAGAGGACAGCTACACCATaGGCAAGGTGGTGGATGGAACCTGGAAGTTTGGGGTGGGTGGTG +
Preference number: 2 (lower is better)
Translates to: RVPSTHRSSERTATP*ARWWMEPGSLGWVV
Trigger: CACCACCCACCCCAAACTTCCAGGTTCCATCCACCACCTTGCCAATGGTGTAGCTGTCCTCTCAGAACTCCTGTGTGTGGAAGGCACCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
3UTR-3UTR TCA 90 bp GAGAGGACAGCTACACCATTGGCAAGGTGGTGGATGGAACCTGGAAGTTTGGGGGGCGCTCACGGTCTCTaGGTCTGGGTAGACGCATCA +
Preference number: 2 (lower is better)
Translates to: ERTATPLARWWMEPGSLGGAHGL*VWVDAS
Trigger: TGATGCGTCTACCCAGACTCAGAGACCGTGAGCGCC...CCCCAAACTTCCAGGTTCCATCCACCACCTTGCCAATGGTGTAGCTGTCCTCTC
58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
3UTR-3UTR TCA 90 bp AAGAAGGCAAGGAAAGGGCGGGTGCCTTCCACACACAGGAGTTCTGAGAGGACAGGCGCTCACGGTCTCTaGGTCTGGGTAGACGCATCA +
Preference number: 2 (lower is better)
Translates to: KKARKGRVPSTHRSSERTGAHGL*VWVDAS
Trigger: TGATGCGTCTACCCAGACTCAGAGACCGTGAGCGCC...TGTCCTCTCAGAACTCCTGTGTGTGGAAGGCACCCGCCCTTTCCTTGCCTTCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
3UTR-3UTR GCA 90 bp AGGAAAGGGCGGGTGCCTTCCACACACAGGAGTTCTGAGAGGACAGCTACACCAGCGGTAGAGCTTCCCTaGCTCTGCCAAGGACATGAC +
Preference number: 2 (lower is better)
Translates to: RKGRVPSTHRSSERTATPAVELP*LCQGHD
Trigger: GTCATGTCCTTGGCAGAGGCAGGGAAGCTCTACCGC...TGGTGTAGCTGTCCTCTCAGAACTCCTGTGTGTGGAAGGCACCCGCCCTTTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349553.9
ENST00000635154.1
3UTR-3UTR CCA 90 bp ACAAGAAACCCAAAGAGAAAAGGAGCACGCCGAGTAAAGAAGGCAAGGAAAGGGGGGTGGGTGGTGGCATaGGGGACCGGCAGAGGGGAG +
Preference number: 2 (lower is better)
Translates to: TRNPKRKGARRVKKARKGGWVVA*GTGRGE
Trigger: CTCCCCTCTGCCGGTCCCCCATGCCACCACCCACCC...CCCTTTCCTTGCCTTCTTTACTCGGCGTGCTCCTTTTCTCTTTGGGTTTCTTGT
58% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
3UTR-3UTR CCA 90 bp AGCACGCCGAGTAAAGAAGGCAAGGAAAGGGCGGGTGCCTTCCACACACAGGAGGTGGTGGATGGAACCTaGAAGTTTGGGGTGGGTGGT +
Preference number: 2 (lower is better)
Translates to: STPSKEGKERAGAFHTQEVVDGT*KFGVGG
Trigger: ACCACCCACCCCAAACTTCCAGGTTCCATCCACCAC...CTCCTGTGTGTGGAAGGCACCCGCCCTTTCCTTGCCTTCTTTACTCGGCGTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
3UTR-3UTR TCA 90 bp CACAGGAGTTCTGAGAGGACAGCTACACCATTGGCAAGGTGGTGGATGGAACCTGGCGCTCACGGTCTCTaGGTCTGGGTAGACGCATCA +
Preference number: 2 (lower is better)
Translates to: HRSSERTATPLARWWMEPGAHGL*VWVDAS
Trigger: TGATGCGTCTACCCAGACTCAGAGACCGTGAGCGCC...AGGTTCCATCCACCACCTTGCCAATGGTGTAGCTGTCCTCTCAGAACTCCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
3UTR-3UTR GCA 90 bp AGAAGGCAAGGAAAGGGCGGGTGCCTTCCACACACAGGAGTTCTGAGAGGACAGCAAGGAAAGGGCGGGTaGCTTCCACACACAGGAGTT +
Preference number: 2 (lower is better)
Translates to: RRQGKGGCLPHTGVLRGQQGKGG*LPHTGV
Trigger: AACTCCTGTGTGTGGAAGGCACCCGCCCTTTCCTTG...CTGTCCTCTCAGAACTCCTGTGTGTGGAAGGCACCCGCCCTTTCCTTGCCTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
3UTR-3UTR GCA 90 bp TACAGCGAGGGAGCTCATGCATCACAGCGAAGAGAATTAGGGACCCTCCACCCAGCGGTAGAGCTTCCCTaGCTCTGCCAAGGACATGAC +
Preference number: 2 (lower is better)
Translates to: YSEGAHASQRRELGTLHPAVELP*LCQGHD
Trigger: GTCATGTCCTTGGCAGAGGCAGGGAAGCTCTACCGC...TGGGTGGAGGGTCCCTAATTCTCTTCGCTGTGATGCATGAGCTCCCTCGCTGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349553.9
ENST00000635154.1
3UTR-3UTR CCA 90 bp GGAAGAGTCCACTCTGTTGGACATAGAAGCCTAAATCATACAGCGAGGGAGCTCGTTTGGGGTGGGTGGTaGCATGGGGGACCGGCAGAG +
Preference number: 2 (lower is better)
Translates to: GRVHSVGHRSLNHTARELVWGGW*HGGPAE
Trigger: CTCTGCCGGTCCCCCATGCCACCACCCACCCCAAAC...GAGCTCCCTCGCTGTATGATTTAGGCTTCTATGTCCAACAGAGTGGACTCTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
3UTR-3UTR TCA 90 bp TGCATCACAGCGAAGAGAATTAGGGACCCTCCACCCATGCCCCCATCACCTTCCCCTCTGCCAAGGACATaGCGCTCTTTCTGTAGTTGG +
Preference number: 2 (lower is better)
Translates to: CITAKRIRDPPPMPPSPSPLPRT*RSFCSW
Trigger: CCAACTACAGAAAGAGCGTCATGTCCTTGGCAGAGG...GGAAGGTGATGGGGGCATGGGTGGAGGGTCCCTAATTCTCTTCGCTGTGATGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349553.9
ENST00000635154.1
3UTR-3UTR GCA 90 bp AAGAAGGCAAGGAAAGGGCGGGTGCCTTCCACACACAGGAGTTCTGAGAGGACAGAGCTTCCCTGCCTCTaGCAAGGACATGACGCTCTT +
Preference number: 2 (lower is better)
Translates to: KKARKGRVPSTHRSSERTELPCL*QGHDAL
Trigger: AAGAGCGTCATGTCCTTGGCAGAGGCAGGGAAGCTC...TGTCCTCTCAGAACTCCTGTGTGTGGAAGGCACCCGCCCTTTCCTTGCCTTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349553.9
ENST00000635154.1
3UTR-3UTR GCA 90 bp AAGAAGGCAAGGAAAGGGCGGGTGCCTTCCACACACAGGAGTTCTGAGAGGACACAATCTCCAGGTCCTTaGGGTAGAGCTTCCCTGCCT +
Preference number: 2 (lower is better)
Translates to: KKARKGRVPSTHRSSERTQSPGP*GRASLP
Trigger: AGGCAGGGAAGCTCTACCGCAAGGACCTGGAGATTG...TGTCCTCTCAGAACTCCTGTGTGTGGAAGGCACCCGCCCTTTCCTTGCCTTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349553.9
ENST00000635154.1
3UTR-3UTR CCA 90 bp AGCACGCCGAGTAAAGAAGGCAAGGAAAGGGCGGGTGCCTTCCACACACAGGAGACACCATTGGCAAGGTaGTGGATGGAACCTGGAAGT +
Preference number: 2 (lower is better)
Translates to: STPSKEGKERAGAFHTQETPLAR*WMEPGS
Trigger: ACTTCCAGGTTCCATCCACCACCTTGCCAATGGTGT...CTCCTGTGTGTGGAAGGCACCCGCCCTTTCCTTGCCTTCTTTACTCGGCGTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
3UTR-3UTR TCA 90 bp GTGCCTTCCACACACAGGAGTTCTGAGAGGACAGCTACACCATTGGCAAGGTGGATGTGTGTGATCCACTaGGCAAAGACTGCCTGGGCA +
Preference number: 2 (lower is better)
Translates to: VPSTHRSSERTATPLARWMCVIH*AKTAWA
Trigger: TGCCCAGGCAGTCTTTGCTCAGTGGATCACACACAT...CCACCTTGCCAATGGTGTAGCTGTCCTCTCAGAACTCCTGTGTGTGGAAGGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
3UTR-3UTR TCA 90 bp CATGCCCCCATCACCTTCCATGTGTGTGATCCACTGAGCAAAGACTGCCTGGGCCACCTTCCATGTGTGTaGTCCACTGAGCAAAGACTG +
Preference number: 2 (lower is better)
Translates to: HAPITFHVCDPLSKDCLGHLPCV*STEQRL
Trigger: CAGTCTTTGCTCAGTGGATCACACACATGGAAGGTG...GCCCAGGCAGTCTTTGCTCAGTGGATCACACACATGGAAGGTGATGGGGGCATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
3UTR-3UTR GCA 90 bp CATGCCCCCATCACCTTCCATGTGTGTGATCCACTGAGCAAAGACTGCCTGGGCCAGCGAGGGAGCTCATaGATCACAGCGAAGAGAATT +
Preference number: 2 (lower is better)
Translates to: HAPITFHVCDPLSKDCLGQRGSS*ITAKRI
Trigger: AATTCTCTTCGCTGTGATGCATGAGCTCCCTCGCTG...GCCCAGGCAGTCTTTGCTCAGTGGATCACACACATGGAAGGTGATGGGGGCATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
3UTR-3UTR CCA 90 bp AGAAACCCAAAGAGAAAAGGAGCACGCCGAGTAAAGAAGGCAAGGAAAGGGCGGAGCAGAAGCAGGGTTTaGGGGAGGTGGAGAAGCAGC +
Preference number: 2 (lower is better)
Translates to: RNPKRKGARRVKKARKGRSRSRV*GRWRSS
Trigger: GCTGCTTCTCCACCTCCCCCAAACCCTGCTTCTGCT...CCGCCCTTTCCTTGCCTTCTTTACTCGGCGTGCTCCTTTTCTCTTTGGGTTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
3UTR-3UTR CCA 90 bp AAGGCAAGGAAAGGGCGGGTGCCTTCCACACACAGGAGTTCTGAGAGGACAGCTACACCATTGGCAAGGTaGTGGATGGAACCTGGAAGT +
Preference number: 2 (lower is better)
Translates to: KARKGRVPSTHRSSERTATPLAR*WMEPGS
Trigger: ACTTCCAGGTTCCATCCACCACCTTGCCAATGGTGT...AGCTGTCCTCTCAGAACTCCTGTGTGTGGAAGGCACCCGCCCTTTCCTTGCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
3UTR-3UTR CCA 90 bp GAGAGGACAGCTACACCATTGGCAAGGTGGTGGATGGAACCTGGAAGTTTGGGGGGACAGCTACACCATTaGCAAGGTGGTGGATGGAAC +
Preference number: 2 (lower is better)
Translates to: ERTATPLARWWMEPGSLGGQLHH*QGGGWN
Trigger: GTTCCATCCACCACCTTGCCAATGGTGTAGCTGTCC...CCCCAAACTTCCAGGTTCCATCCACCACCTTGCCAATGGTGTAGCTGTCCTCTC
54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
3UTR-3UTR TCA 90 bp GAGAGGACAGCTACACCATTGGCAAGGTGGTGGATGGAACCTGGAAGTTTGGGGCACCTTCCATGTGTGTaGTCCACTGAGCAAAGACTG +
Preference number: 2 (lower is better)
Translates to: ERTATPLARWWMEPGSLGHLPCV*STEQRL
Trigger: CAGTCTTTGCTCAGTGGATCACACACATGGAAGGTG...CCCCAAACTTCCAGGTTCCATCCACCACCTTGCCAATGGTGTAGCTGTCCTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
3UTR-3UTR TCA 90 bp TACAGCGAGGGAGCTCATGCATCACAGCGAAGAGAATTAGGGACCCTCCACCCACACCTTCCATGTGTGTaGTCCACTGAGCAAAGACTG +
Preference number: 2 (lower is better)
Translates to: YSEGAHASQRRELGTLHPHLPCV*STEQRL
Trigger: CAGTCTTTGCTCAGTGGATCACACACATGGAAGGTG...TGGGTGGAGGGTCCCTAATTCTCTTCGCTGTGATGCATGAGCTCCCTCGCTGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
3UTR-3UTR TCA 90 bp CACACAGGAGTTCTGAGAGGACAGCTACACCATTGGCAAGGTGGTGGATGGAACCCTCTGCCAAGGACATaGCGCTCTTTCTGTAGTTGG +
Preference number: 2 (lower is better)
Translates to: HTGVLRGQLHHWQGGGWNPLPRT*RSFCSW
Trigger: CCAACTACAGAAAGAGCGTCATGTCCTTGGCAGAGG...GTTCCATCCACCACCTTGCCAATGGTGTAGCTGTCCTCTCAGAACTCCTGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349553.9
ENST00000635154.1
3UTR-3UTR GCA 90 bp TACAGCGAGGGAGCTCATGCATCACAGCGAAGAGAATTAGGGACCCTCCACCCACAGCGAGGGAGCTCATaGATCACAGCGAAGAGAATT +
Preference number: 2 (lower is better)
Translates to: YSEGAHASQRRELGTLHPQRGSS*ITAKRI
Trigger: AATTCTCTTCGCTGTGATGCATGAGCTCCCTCGCTG...TGGGTGGAGGGTCCCTAATTCTCTTCGCTGTGATGCATGAGCTCCCTCGCTGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
3UTR-3UTR TCA 90 bp CACACAGGAGTTCTGAGAGGACAGCTACACCATTGGCAAGGTGGTGGATGGAACCACCTTCCATGTGTGTaGTCCACTGAGCAAAGACTG +
Preference number: 2 (lower is better)
Translates to: HTGVLRGQLHHWQGGGWNHLPCV*STEQRL
Trigger: CAGTCTTTGCTCAGTGGATCACACACATGGAAGGTG...GTTCCATCCACCACCTTGCCAATGGTGTAGCTGTCCTCTCAGAACTCCTGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
3UTR-3UTR GCA 90 bp GGAAGAGTCCACTCTGTTGGACATAGAAGCCTAAATCATACAGCGAGGGAGCTCGAGCTTCCCTGCCTCTaGCAAGGACATGACGCTCTT +
Preference number: 2 (lower is better)
Translates to: GRVHSVGHRSLNHTARELELPCL*QGHDAL
Trigger: AAGAGCGTCATGTCCTTGGCAGAGGCAGGGAAGCTC...GAGCTCCCTCGCTGTATGATTTAGGCTTCTATGTCCAACAGAGTGGACTCTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349553.9
ENST00000635154.1
3UTR-3UTR CCA 90 bp AGAAACCCAAAGAGAAAAGGAGCACGCCGAGTAAAGAAGGCAAGGAAAGGGCGGCCATTGGCAAGGTGGTaGATGGAACCTGGAAGTTTG +
Preference number: 2 (lower is better)
Translates to: RNPKRKGARRVKKARKGRPLARW*MEPGSL
Trigger: CAAACTTCCAGGTTCCATCCACCACCTTGCCAATGG...CCGCCCTTTCCTTGCCTTCTTTACTCGGCGTGCTCCTTTTCTCTTTGGGTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
3UTR-3UTR CCA 90 bp ACAAGAAACCCAAAGAGAAAAGGAGCACGCCGAGTAAAGAAGGCAAGGAAAGGGGGACAGCTACACCATTaGCAAGGTGGTGGATGGAAC +
Preference number: 2 (lower is better)
Translates to: TRNPKRKGARRVKKARKGGQLHH*QGGGWN
Trigger: GTTCCATCCACCACCTTGCCAATGGTGTAGCTGTCC...CCCTTTCCTTGCCTTCTTTACTCGGCGTGCTCCTTTTCTCTTTGGGTTTCTTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
3UTR-3UTR CCA 90 bp ACAAGAAACCCAAAGAGAAAAGGAGCACGCCGAGTAAAGAAGGCAAGGAAAGGGCCATTGGCAAGGTGGTaGATGGAACCTGGAAGTTTG +
Preference number: 2 (lower is better)
Translates to: TRNPKRKGARRVKKARKGPLARW*MEPGSL
Trigger: CAAACTTCCAGGTTCCATCCACCACCTTGCCAATGG...CCCTTTCCTTGCCTTCTTTACTCGGCGTGCTCCTTTTCTCTTTGGGTTTCTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
3UTR CCA 72 bp CTGAGAGGACAGCTACACCATTGGCAAGGTGGTGGATaGAACCTGGAAGTTTGGGGTGGGTGGTGGCATGGG +
Preference number: 3 (lower is better)
Translates to: LRGQLHHWQGGG*NLEVWGGWWHG
Trigger: CCCATGCCACCACCCACCCCAAACTTCCAGGTTCCATCCACCACCTTGCCAATGGTGTAGCTGTCCTCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
3UTR TCA 72 bp AAGGAAAGGGCGGGTGCCTTCCACACACAGGAGTTCTaGGAGGACAGCTACACCATTGGCAAGGTGGTGGAT +
Preference number: 3 (lower is better)
Translates to: KERAGAFHTQEF*EDSYTIGKVVD
Trigger: ATCCACCACCTTGCCAATGGTGTAGCTGTCCTCTCAGAACTCCTGTGTGTGGAAGGCACCCGCCCTTTCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
3UTR CCA 72 bp AGTTCTGAGAGGACAGCTACACCATTGGCAAGGTGGTaGATGGAACCTGGAAGTTTGGGGTGGGTGGTGGCA +
Preference number: 3 (lower is better)
Translates to: SSERTATPLARW*MEPGSLGWVVA
Trigger: TGCCACCACCCACCCCAAACTTCCAGGTTCCATCCACCACCTTGCCAATGGTGTAGCTGTCCTCTCAGAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
3UTR-3UTR CAA 90 bp AAGAAGGCAAGGAAAGGGCGGGTGCCTTCCACACACAGGAGTTCTGAGAGGACAAGGACAGCTACACCATaGGCAAGGTGGTGGATGGAA +
Preference number: 3 (lower is better)
Translates to: KKARKGRVPSTHRSSERTRTATP*ARWWME
Trigger: TTCCATCCACCACCTTGCCAATGGTGTAGCTGTCCT...TGTCCTCTCAGAACTCCTGTGTGTGGAAGGCACCCGCCCTTTCCTTGCCTTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
3UTR GCA 72 bp AATCTCCAGGTCCTTGCGGTAGAGCTTCCCTGCCTCTaGCAAGGACATGACGCTCTTTCTGTAGTTGGTGAG +
Preference number: 3 (lower is better)
Translates to: NLQVLAVELPCL*QGHDALSVVGE
Trigger: CTCACCAACTACAGAAAGAGCGTCATGTCCTTGGCAGAGGCAGGGAAGCTCTACCGCAAGGACCTGGAGATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349553.9
ENST00000635154.1
3UTR GCA 72 bp GAGCACAATCTCCAGGTCCTTGCGGTAGAGCTTCCCTaGCTCTGCCAAGGACATGACGCTCTTTCTGTAGTT +
Preference number: 3 (lower is better)
Translates to: EHNLQVLAVELP*LCQGHDALSVV
Trigger: AACTACAGAAAGAGCGTCATGTCCTTGGCAGAGGCAGGGAAGCTCTACCGCAAGGACCTGGAGATTGTGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349553.9
ENST00000635154.1
3UTR CCA 72 bp CCACACACAGGAGTTCTGAGAGGACAGCTACACCATTaGCAAGGTGGTGGATGGAACCTGGAAGTTTGGGGT +
Preference number: 3 (lower is better)
Translates to: PHTGVLRGQLHH*QGGGWNLEVWG
Trigger: ACCCCAAACTTCCAGGTTCCATCCACCACCTTGCCAATGGTGTAGCTGTCCTCTCAGAACTCCTGTGTGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS-3UTR GCA 90 bp GGGCTCGCTGCAGAGCACAATCTCCAGGTCCTTGCGGTAGAGCTTCCCTGCCTCTCGGAGACCTCAGCCTaGACCGCTCCCGCTCCGCGC +
Preference number: 4 (lower is better)
Translates to: GLAAEHNLQVLAVELPCLSETSA*TAPAPR
Trigger: GCGCGGAGCGGGAGCGGTGCAGGCTGAGGTCTCCGA...GAGGCAGGGAAGCTCTACCGCAAGGACCTGGAGATTGTGCTCTGCAGCGAGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349553.9
ENST00000635154.1
CDS-3UTR CCA 90 bp CGGTCTCTGAGTCTGGGTAGACGCATCAGGGCAGCAGAAGCAGGGTTTGGGGGAGCTGCGGGCCAGCCATaGCGAGCCGCTCGGAGACCT +
Preference number: 4 (lower is better)
Translates to: RSLSLGRRIRAAEAGFGGAAGQP*RAARRP
Trigger: AGGTCTCCGAGCGGCTCGCCATGGCTGGCCCGCAGC...TCCCCCAAACCCTGCTTCTGCTGCCCTGATGCGTCTACCCAGACTCAGAGACCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS-3UTR CCA 90 bp CGGTCTCTGAGTCTGGGTAGACGCATCAGGGCAGCAGAAGCAGGGTTTGGGGGAGGGTGGGTGGTGGCATaGGGGACCGGCAGAGGGGAG +
Preference number: 4 (lower is better)
Translates to: RSLSLGRRIRAAEAGFGGGWVVA*GTGRGE
Trigger: CTCCCCTCTGCCGGTCCCCCATGCCACCACCCACCC...TCCCCCAAACCCTGCTTCTGCTGCCCTGATGCGTCTACCCAGACTCAGAGACCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS-3UTR CCA 90 bp CGAGGGAGCTCATGCATCACAGCGAAGAGAATTAGGGACCCTCCACCCATGCCCGCTGCGGGCCAGCCATaGCGAGCCGCTCGGAGACCT +
Preference number: 4 (lower is better)
Translates to: RGSSCITAKRIRDPPPMPAAGQP*RAARRP
Trigger: AGGTCTCCGAGCGGCTCGCCATGGCTGGCCCGCAGC...GGGCATGGGTGGAGGGTCCCTAATTCTCTTCGCTGTGATGCATGAGCTCCCTCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS-3UTR CCA 90 bp CGAGGGAGCTCATGCATCACAGCGAAGAGAATTAGGGACCCTCCACCCATGCCCGGGTGGGTGGTGGCATaGGGGACCGGCAGAGGGGAG +
Preference number: 4 (lower is better)
Translates to: RGSSCITAKRIRDPPPMPGWVVA*GTGRGE
Trigger: CTCCCCTCTGCCGGTCCCCCATGCCACCACCCACCC...GGGCATGGGTGGAGGGTCCCTAATTCTCTTCGCTGTGATGCATGAGCTCCCTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS-3UTR GCA 90 bp AAGGCAAGGAAAGGGCGGGTGCCTTCCACACACAGGAGTTCTGAGAGGACAGCTTCGGAGACCTCAGCCTaGACCGCTCCCGCTCCGCGC +
Preference number: 4 (lower is better)
Translates to: KARKGRVPSTHRSSERTASETSA*TAPAPR
Trigger: GCGCGGAGCGGGAGCGGTGCAGGCTGAGGTCTCCGA...AGCTGTCCTCTCAGAACTCCTGTGTGTGGAAGGCACCCGCCCTTTCCTTGCCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS-3UTR CCA 90 bp AGGCAAGGAAAGGGCGGGTGCCTTCCACACACAGGAGTTCTGAGAGGACAGCTAGGGTGGGTGGTGGCATaGGGGACCGGCAGAGGGGAG +
Preference number: 4 (lower is better)
Translates to: RQGKGGCLPHTGVLRGQLGWVVA*GTGRGE
Trigger: CTCCCCTCTGCCGGTCCCCCATGCCACCACCCACCC...TAGCTGTCCTCTCAGAACTCCTGTGTGTGGAAGGCACCCGCCCTTTCCTTGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS-3UTR GCA 90 bp GAGAGGACAGCTACACCATTGGCAAGGTGGTGGATGGAACCTGGAAGTTTGGGGTCGGAGACCTCAGCCTaGACCGCTCCCGCTCCGCGC +
Preference number: 4 (lower is better)
Translates to: ERTATPLARWWMEPGSLGSETSA*TAPAPR
Trigger: GCGCGGAGCGGGAGCGGTGCAGGCTGAGGTCTCCGA...CCCCAAACTTCCAGGTTCCATCCACCACCTTGCCAATGGTGTAGCTGTCCTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS-3UTR GCA 90 bp TCCACCCATGCCCCCATCACCTTCCATGTGTGTGATCCACTGAGCAAAGACTGCTCGGAGACCTCAGCCTaGACCGCTCCCGCTCCGCGC +
Preference number: 4 (lower is better)
Translates to: STHAPITFHVCDPLSKDCSETSA*TAPAPR
Trigger: GCGCGGAGCGGGAGCGGTGCAGGCTGAGGTCTCCGA...GCAGTCTTTGCTCAGTGGATCACACACATGGAAGGTGATGGGGGCATGGGTGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS-3UTR GCA 90 bp GTCTGGGTAGACGCATCAGGGCAGCAGAAGCAGGGTTTGGGGGAGGTGGAGAAGGCGCTGGAGCCCACGTaGTGCCTGAAGCACAGAAGG +
Preference number: 4 (lower is better)
Translates to: VWVDASGQQKQGLGEVEKALEPT*CLKHRR
Trigger: CCTTCTGTGCTTCAGGCAGCACGTGGGCTCCAGCGC...CTTCTCCACCTCCCCCAAACCCTGCTTCTGCTGCCCTGATGCGTCTACCCAGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS-3UTR CCA 90 bp GTGCCTTCCACACACAGGAGTTCTGAGAGGACAGCTACACCATTGGCAAGGTGGGCTGCGGGCCAGCCATaGCGAGCCGCTCGGAGACCT +
Preference number: 4 (lower is better)
Translates to: VPSTHRSSERTATPLARWAAGQP*RAARRP
Trigger: AGGTCTCCGAGCGGCTCGCCATGGCTGGCCCGCAGC...CCACCTTGCCAATGGTGTAGCTGTCCTCTCAGAACTCCTGTGTGTGGAAGGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS-3UTR CCA 90 bp CGAGGGAGCTCATGCATCACAGCGAAGAGAATTAGGGACCCTCCACCCATGCCCAGGGTTTGGGGGAGGTaGAGAAGCAGCCCCCGTCCC +
Preference number: 4 (lower is better)
Translates to: RGSSCITAKRIRDPPPMPRVWGR*RSSPRP
Trigger: GGGACGGGGGCTGCTTCTCCACCTCCCCCAAACCCT...GGGCATGGGTGGAGGGTCCCTAATTCTCTTCGCTGTGATGCATGAGCTCCCTCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS-3UTR CCA 90 bp GGAGTTCTGAGAGGACAGCTACACCATTGGCAAGGTGGTGGATGGAACCTGGAAGCTGCGGGCCAGCCATaGCGAGCCGCTCGGAGACCT +
Preference number: 4 (lower is better)
Translates to: GVLRGQLHHWQGGGWNLEAAGQP*RAARRP
Trigger: AGGTCTCCGAGCGGCTCGCCATGGCTGGCCCGCAGC...TTCCAGGTTCCATCCACCACCTTGCCAATGGTGTAGCTGTCCTCTCAGAACTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS-3UTR CCA 90 bp CACACAGGAGTTCTGAGAGGACAGCTACACCATTGGCAAGGTGGTGGATGGAACGGGTGGGTGGTGGCATaGGGGACCGGCAGAGGGGAG +
Preference number: 4 (lower is better)
Translates to: HTGVLRGQLHHWQGGGWNGWVVA*GTGRGE
Trigger: CTCCCCTCTGCCGGTCCCCCATGCCACCACCCACCC...GTTCCATCCACCACCTTGCCAATGGTGTAGCTGTCCTCTCAGAACTCCTGTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS-3UTR CCA 90 bp CATGCCCCCATCACCTTCCATGTGTGTGATCCACTGAGCAAAGACTGCCTGGGCGTTTGGGGTGGGTGGTaGCATGGGGGACCGGCAGAG +
Preference number: 4 (lower is better)
Translates to: HAPITFHVCDPLSKDCLGVWGGW*HGGPAE
Trigger: CTCTGCCGGTCCCCCATGCCACCACCCACCCCAAAC...GCCCAGGCAGTCTTTGCTCAGTGGATCACACACATGGAAGGTGATGGGGGCATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS-3UTR CCA 90 bp CTGAGTCTGGGTAGACGCATCAGGGCAGCAGAAGCAGGGTTTGGGGGAGGTGGAAGCAGAAGCAGGGTTTaGGGGAGGTGGAGAAGCAGC +
Preference number: 4 (lower is better)
Translates to: LSLGRRIRAAEAGFGGGGSRSRV*GRWRSS
Trigger: GCTGCTTCTCCACCTCCCCCAAACCCTGCTTCTGCT...TCCACCTCCCCCAAACCCTGCTTCTGCTGCCCTGATGCGTCTACCCAGACTCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS-3UTR TCA 90 bp TGCATCACAGCGAAGAGAATTAGGGACCCTCCACCCATGCCCCCATCACCTTCCGGCGCTCACGGTCTCTaGGTCTGGGTAGACGCATCA +
Preference number: 4 (lower is better)
Translates to: CITAKRIRDPPPMPPSPSGAHGL*VWVDAS
Trigger: TGATGCGTCTACCCAGACTCAGAGACCGTGAGCGCC...GGAAGGTGATGGGGGCATGGGTGGAGGGTCCCTAATTCTCTTCGCTGTGATGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS-3UTR CCA 90 bp CGAGGGAGCTCATGCATCACAGCGAAGAGAATTAGGGACCCTCCACCCATGCCCCATATTTCCAGGAACTaGGACGCCGTCAGCTCGGCC +
Preference number: 4 (lower is better)
Translates to: RGSSCITAKRIRDPPPMPHISRN*DAVSSA
Trigger: GGCCGAGCTGACGGCGTCCCAGTTCCTGGAAATATG...GGGCATGGGTGGAGGGTCCCTAATTCTCTTCGCTGTGATGCATGAGCTCCCTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS-3UTR CCA 90 bp GGAGTTCTGAGAGGACAGCTACACCATTGGCAAGGTGGTGGATGGAACCTGGAAGTTTGGGGTGGGTGGTaGCATGGGGGACCGGCAGAG +
Preference number: 4 (lower is better)
Translates to: GVLRGQLHHWQGGGWNLEVWGGW*HGGPAE
Trigger: CTCTGCCGGTCCCCCATGCCACCACCCACCCCAAAC...TTCCAGGTTCCATCCACCACCTTGCCAATGGTGTAGCTGTCCTCTCAGAACTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS-3UTR CCA 90 bp CTGAGAGGACAGCTACACCATTGGCAAGGTGGTGGATGGAACCTGGAAGTTTGGGTTTGGGGTGGGTGGTaGCATGGGGGACCGGCAGAG +
Preference number: 4 (lower is better)
Translates to: LRGQLHHWQGGGWNLEVWVWGGW*HGGPAE
Trigger: CTCTGCCGGTCCCCCATGCCACCACCCACCCCAAAC...CCAAACTTCCAGGTTCCATCCACCACCTTGCCAATGGTGTAGCTGTCCTCTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS-3UTR TCA 90 bp CGAGGGAGCTCATGCATCACAGCGAAGAGAATTAGGGACCCTCCACCCATGCCCCGCGTTAAACTCCTCTaGGGTCAGCTTCATGCCCTG +
Preference number: 4 (lower is better)
Translates to: RGSSCITAKRIRDPPPMPRVKLL*GQLHAL
Trigger: CAGGGCATGAAGCTGACCTCAGAGGAGTTTAACGCG...GGGCATGGGTGGAGGGTCCCTAATTCTCTTCGCTGTGATGCATGAGCTCCCTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302628.9
ENST00000635371.2
CDS-3UTR TCA 90 bp GTCTGGGTAGACGCATCAGGGCAGCAGAAGCAGGGTTTGGGGGAGGTGGAGAAGCCTCTGCCAAGGACATaGCGCTCTTTCTGTAGTTGG +
Preference number: 4 (lower is better)
Translates to: VWVDASGQQKQGLGEVEKPLPRT*RSFCSW
Trigger: CCAACTACAGAAAGAGCGTCATGTCCTTGGCAGAGG...CTTCTCCACCTCCCCCAAACCCTGCTTCTGCTGCCCTGATGCGTCTACCCAGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS-3UTR TCA 90 bp ACAGCGAAGAGAATTAGGGACCCTCCACCCATGCCCCCATCACCTTCCATGTGTGGCGCTCACGGTCTCTaGGTCTGGGTAGACGCATCA +
Preference number: 4 (lower is better)
Translates to: TAKRIRDPPPMPPSPSMCGAHGL*VWVDAS
Trigger: TGATGCGTCTACCCAGACTCAGAGACCGTGAGCGCC...ACACATGGAAGGTGATGGGGGCATGGGTGGAGGGTCCCTAATTCTCTTCGCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS-3UTR TCA 90 bp CGGTCTCTGAGTCTGGGTAGACGCATCAGGGCAGCAGAAGCAGGGTTTGGGGGAATGTGTGTGATCCACTaGGCAAAGACTGCCTGGGCA +
Preference number: 4 (lower is better)
Translates to: RSLSLGRRIRAAEAGFGGMCVIH*AKTAWA
Trigger: TGCCCAGGCAGTCTTTGCTCAGTGGATCACACACAT...TCCCCCAAACCCTGCTTCTGCTGCCCTGATGCGTCTACCCAGACTCAGAGACCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS-3UTR GCA 90 bp CACAGGAGTTCTGAGAGGACAGCTACACCATTGGCAAGGTGGTGGATGGAACCTGCGCTGGAGCCCACGTaGTGCCTGAAGCACAGAAGG +
Preference number: 4 (lower is better)
Translates to: HRSSERTATPLARWWMEPALEPT*CLKHRR
Trigger: CCTTCTGTGCTTCAGGCAGCACGTGGGCTCCAGCGC...AGGTTCCATCCACCACCTTGCCAATGGTGTAGCTGTCCTCTCAGAACTCCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS-3UTR GCA 90 bp CATGCCCCCATCACCTTCCATGTGTGTGATCCACTGAGCAAAGACTGCCTGGGCGCGGTAGAGCTTCCCTaGCTCTGCCAAGGACATGAC +
Preference number: 4 (lower is better)
Translates to: HAPITFHVCDPLSKDCLGAVELP*LCQGHD
Trigger: GTCATGTCCTTGGCAGAGGCAGGGAAGCTCTACCGC...GCCCAGGCAGTCTTTGCTCAGTGGATCACACACATGGAAGGTGATGGGGGCATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS-3UTR GCA 90 bp CGAGGGAGCTCATGCATCACAGCGAAGAGAATTAGGGACCCTCCACCCATGCCCCAATCTCCAGGTCCTTaGGGTAGAGCTTCCCTGCCT +
Preference number: 4 (lower is better)
Translates to: RGSSCITAKRIRDPPPMPQSPGP*GRASLP
Trigger: AGGCAGGGAAGCTCTACCGCAAGGACCTGGAGATTG...GGGCATGGGTGGAGGGTCCCTAATTCTCTTCGCTGTGATGCATGAGCTCCCTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS-3UTR CCA 90 bp GCCCCCATCACCTTCCATGTGTGTGATCCACTGAGCAAAGACTGCCTGGGCAGGTGTATTCCTGGAGCTTaGGCTCATCGTACGGCCGGT +
Preference number: 4 (lower is better)
Translates to: APITFHVCDPLSKDCLGRCIPGA*AHRTAG
Trigger: ACCGGCCGTACGATGAGCCCAAGCTCCAGGAATACA...CCTGCCCAGGCAGTCTTTGCTCAGTGGATCACACACATGGAAGGTGATGGGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS-3UTR CCA 90 bp TCCACCCATGCCCCCATCACCTTCCATGTGTGTGATCCACTGAGCAAAGACTGCCGTCCCCACTTTACATaGGGGGCTCGCTGCAGAGCA +
Preference number: 4 (lower is better)
Translates to: STHAPITFHVCDPLSKDCRPHFT*GARCRA
Trigger: TGCTCTGCAGCGAGCCCCCCATGTAAAGTGGGGACG...GCAGTCTTTGCTCAGTGGATCACACACATGGAAGGTGATGGGGGCATGGGTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS-3UTR CCA 90 bp AGAAACCCAAAGAGAAAAGGAGCACGCCGAGTAAAGAAGGCAAGGAAAGGGCGGAGGGTTTGGGGGAGGTaGAGAAGCAGCCCCCGTCCC +
Preference number: 4 (lower is better)
Translates to: RNPKRKGARRVKKARKGRRVWGR*RSSPRP
Trigger: GGGACGGGGGCTGCTTCTCCACCTCCCCCAAACCCT...CCGCCCTTTCCTTGCCTTCTTTACTCGGCGTGCTCCTTTTCTCTTTGGGTTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS-3UTR CCA 90 bp CAGCGAGGGAGCTCATGCATCACAGCGAAGAGAATTAGGGACCCTCCACCCATGTGGAACCTGGAAGTTTaGGGTGGGTGGTGGCATGGG +
Preference number: 4 (lower is better)
Translates to: QRGSSCITAKRIRDPPPMWNLEV*GGWWHG
Trigger: CCCATGCCACCACCCACCCCAAACTTCCAGGTTCCA...CATGGGTGGAGGGTCCCTAATTCTCTTCGCTGTGATGCATGAGCTCCCTCGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS-3UTR CCA 90 bp AGAAGGCAAGGAAAGGGCGGGTGCCTTCCACACACAGGAGTTCTGAGAGGACAGTGGAACCTGGAAGTTTaGGGTGGGTGGTGGCATGGG +
Preference number: 4 (lower is better)
Translates to: RRQGKGGCLPHTGVLRGQWNLEV*GGWWHG
Trigger: CCCATGCCACCACCCACCCCAAACTTCCAGGTTCCA...CTGTCCTCTCAGAACTCCTGTGTGTGGAAGGCACCCGCCCTTTCCTTGCCTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS-3UTR CCA 90 bp GCAGAGCACAATCTCCAGGTCCTTGCGGTAGAGCTTCCCTGCCTCTGCCAAGGAGTGGTGGATGGAACCTaGAAGTTTGGGGTGGGTGGT +
Preference number: 4 (lower is better)
Translates to: AEHNLQVLAVELPCLCQGVVDGT*KFGVGG
Trigger: ACCACCCACCCCAAACTTCCAGGTTCCATCCACCAC...TCCTTGGCAGAGGCAGGGAAGCTCTACCGCAAGGACCTGGAGATTGTGCTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349553.9
ENST00000635154.1
CDS-3UTR CCA 90 bp CGGTCTCTGAGTCTGGGTAGACGCATCAGGGCAGCAGAAGCAGGGTTTGGGGGAGGACAGCTACACCATTaGCAAGGTGGTGGATGGAAC +
Preference number: 4 (lower is better)
Translates to: RSLSLGRRIRAAEAGFGGGQLHH*QGGGWN
Trigger: GTTCCATCCACCACCTTGCCAATGGTGTAGCTGTCC...TCCCCCAAACCCTGCTTCTGCTGCCCTGATGCGTCTACCCAGACTCAGAGACCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS-3UTR TCA 90 bp GCCCCCATCACCTTCCATGTGTGTGATCCACTGAGCAAAGACTGCCTGGGCAGGCCTCTGCCAAGGACATaGCGCTCTTTCTGTAGTTGG +
Preference number: 4 (lower is better)
Translates to: APITFHVCDPLSKDCLGRPLPRT*RSFCSW
Trigger: CCAACTACAGAAAGAGCGTCATGTCCTTGGCAGAGG...CCTGCCCAGGCAGTCTTTGCTCAGTGGATCACACACATGGAAGGTGATGGGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS-3UTR TCA 90 bp AGCACGCCGAGTAAAGAAGGCAAGGAAAGGGCGGGTGCCTTCCACACACAGGAGATGTGTGTGATCCACTaGGCAAAGACTGCCTGGGCA +
Preference number: 4 (lower is better)
Translates to: STPSKEGKERAGAFHTQEMCVIH*AKTAWA
Trigger: TGCCCAGGCAGTCTTTGCTCAGTGGATCACACACAT...CTCCTGTGTGTGGAAGGCACCCGCCCTTTCCTTGCCTTCTTTACTCGGCGTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS-3UTR TCA 90 bp CTGAGTCTGGGTAGACGCATCAGGGCAGCAGAAGCAGGGTTTGGGGGAGGTGGACACCTTCCATGTGTGTaGTCCACTGAGCAAAGACTG +
Preference number: 4 (lower is better)
Translates to: LSLGRRIRAAEAGFGGGGHLPCV*STEQRL
Trigger: CAGTCTTTGCTCAGTGGATCACACACATGGAAGGTG...TCCACCTCCCCCAAACCCTGCTTCTGCTGCCCTGATGCGTCTACCCAGACTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS-3UTR GCA 90 bp GAGAGGACAGCTACACCATTGGCAAGGTGGTGGATGGAACCTGGAAGTTTGGGGCTGGAGCCCACGTGCTaGCTGAAGCACAGAAGGAAG +
Preference number: 4 (lower is better)
Translates to: ERTATPLARWWMEPGSLGLEPTC*LKHRRK
Trigger: CTTCCTTCTGTGCTTCAGGCAGCACGTGGGCTCCAG...CCCCAAACTTCCAGGTTCCATCCACCACCTTGCCAATGGTGTAGCTGTCCTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS-3UTR GCA 90 bp TACAGCGAGGGAGCTCATGCATCACAGCGAAGAGAATTAGGGACCCTCCACCCACTGGAGCCCACGTGCTaGCTGAAGCACAGAAGGAAG +
Preference number: 4 (lower is better)
Translates to: YSEGAHASQRRELGTLHPLEPTC*LKHRRK
Trigger: CTTCCTTCTGTGCTTCAGGCAGCACGTGGGCTCCAG...TGGGTGGAGGGTCCCTAATTCTCTTCGCTGTGATGCATGAGCTCCCTCGCTGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS-3UTR GCA 90 bp TCCACCCATGCCCCCATCACCTTCCATGTGTGTGATCCACTGAGCAAAGACTGCCTGGAGCCCACGTGCTaGCTGAAGCACAGAAGGAAG +
Preference number: 4 (lower is better)
Translates to: STHAPITFHVCDPLSKDCLEPTC*LKHRRK
Trigger: CTTCCTTCTGTGCTTCAGGCAGCACGTGGGCTCCAG...GCAGTCTTTGCTCAGTGGATCACACACATGGAAGGTGATGGGGGCATGGGTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS-3UTR GCA 90 bp CTGAGTCTGGGTAGACGCATCAGGGCAGCAGAAGCAGGGTTTGGGGGAGGTGGACTGAGAGGCCCAATTTaGCATCCCCGTTCAAGTCAA +
Preference number: 4 (lower is better)
Translates to: LSLGRRIRAAEAGFGGGGLRGPI*HPRSSQ
Trigger: TTGACTTGAACGGGGATGGCAAATTGGGCCTCTCAG...TCCACCTCCCCCAAACCCTGCTTCTGCTGCCCTGATGCGTCTACCCAGACTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS-3UTR GCA 90 bp GTGCCTTCCACACACAGGAGTTCTGAGAGGACAGCTACACCATTGGCAAGGTGGGCGGTAGAGCTTCCCTaGCTCTGCCAAGGACATGAC +
Preference number: 4 (lower is better)
Translates to: VPSTHRSSERTATPLARWAVELP*LCQGHD
Trigger: GTCATGTCCTTGGCAGAGGCAGGGAAGCTCTACCGC...CCACCTTGCCAATGGTGTAGCTGTCCTCTCAGAACTCCTGTGTGTGGAAGGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS-3UTR GCA 90 bp CAGCGAGGGAGCTCATGCATCACAGCGAAGAGAATTAGGGACCCTCCACCCATGCAATCTCCAGGTCCTTaGGGTAGAGCTTCCCTGCCT +
Preference number: 4 (lower is better)
Translates to: QRGSSCITAKRIRDPPPMQSPGP*GRASLP
Trigger: AGGCAGGGAAGCTCTACCGCAAGGACCTGGAGATTG...CATGGGTGGAGGGTCCCTAATTCTCTTCGCTGTGATGCATGAGCTCCCTCGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS-3UTR GCA 90 bp AAGGCAAGGAAAGGGCGGGTGCCTTCCACACACAGGAGTTCTGAGAGGACAGCTCAATCTCCAGGTCCTTaGGGTAGAGCTTCCCTGCCT +
Preference number: 4 (lower is better)
Translates to: KARKGRVPSTHRSSERTAQSPGP*GRASLP
Trigger: AGGCAGGGAAGCTCTACCGCAAGGACCTGGAGATTG...AGCTGTCCTCTCAGAACTCCTGTGTGTGGAAGGCACCCGCCCTTTCCTTGCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS-3UTR GCA 90 bp CAGCGAGGGAGCTCATGCATCACAGCGAAGAGAATTAGGGACCCTCCACCCATGCAAGGAAAGGGCGGGTaGCTTCCACACACAGGAGTT +
Preference number: 4 (lower is better)
Translates to: QRGSSCITAKRIRDPPPMQGKGG*LPHTGV
Trigger: AACTCCTGTGTGTGGAAGGCACCCGCCCTTTCCTTG...CATGGGTGGAGGGTCCCTAATTCTCTTCGCTGTGATGCATGAGCTCCCTCGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS-3UTR CCA 90 bp AGGCAAGGAAAGGGCGGGTGCCTTCCACACACAGGAGTTCTGAGAGGACAGCTAGAAGTTCTCTTCGGTTaGCAGGATCTGCGCCAGCTC +
Preference number: 4 (lower is better)
Translates to: RQGKGGCLPHTGVLRGQLEVLFG*QDLRQL
Trigger: GAGCTGGCGCAGATCCTGCCAACCGAAGAGAACTTC...TAGCTGTCCTCTCAGAACTCCTGTGTGTGGAAGGCACCCGCCCTTTCCTTGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS-3UTR CCA 90 bp CAGCGAGGGAGCTCATGCATCACAGCGAAGAGAATTAGGGACCCTCCACCCATGGAAGTTCTCTTCGGTTaGCAGGATCTGCGCCAGCTC +
Preference number: 4 (lower is better)
Translates to: QRGSSCITAKRIRDPPPMEVLFG*QDLRQL
Trigger: GAGCTGGCGCAGATCCTGCCAACCGAAGAGAACTTC...CATGGGTGGAGGGTCCCTAATTCTCTTCGCTGTGATGCATGAGCTCCCTCGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS-3UTR CCA 90 bp AGAAGGCAAGGAAAGGGCGGGTGCCTTCCACACACAGGAGTTCTGAGAGGACAGAGCAGGAAGTTTTCCTaGACAGGCAGGAGTCGGGAC +
Preference number: 4 (lower is better)
Translates to: RRQGKGGCLPHTGVLRGQSRKFS*TGRSRD
Trigger: GTCCCGACTCCTGCCTGTCCAGGAAAACTTCCTGCT...CTGTCCTCTCAGAACTCCTGTGTGTGGAAGGCACCCGCCCTTTCCTTGCCTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302628.9
ENST00000635371.2
CDS-3UTR CCA 90 bp GGAGTTCTGAGAGGACAGCTACACCATTGGCAAGGTGGTGGATGGAACCTGGAACGTCCCCACTTTACATaGGGGGCTCGCTGCAGAGCA +
Preference number: 4 (lower is better)
Translates to: GVLRGQLHHWQGGGWNLERPHFT*GARCRA
Trigger: TGCTCTGCAGCGAGCCCCCCATGTAAAGTGGGGACG...TTCCAGGTTCCATCCACCACCTTGCCAATGGTGTAGCTGTCCTCTCAGAACTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS-3UTR CCA 90 bp CAGCGAGGGAGCTCATGCATCACAGCGAAGAGAATTAGGGACCCTCCACCCATGGTGGTGGATGGAACCTaGAAGTTTGGGGTGGGTGGT +
Preference number: 4 (lower is better)
Translates to: QRGSSCITAKRIRDPPPMVVDGT*KFGVGG
Trigger: ACCACCCACCCCAAACTTCCAGGTTCCATCCACCAC...CATGGGTGGAGGGTCCCTAATTCTCTTCGCTGTGATGCATGAGCTCCCTCGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS-3UTR CCA 90 bp AGCGAGGGAGCTCATGCATCACAGCGAAGAGAATTAGGGACCCTCCACCCATGCGTGGTGGATGGAACCTaGAAGTTTGGGGTGGGTGGT +
Preference number: 4 (lower is better)
Translates to: SEGAHASQRRELGTLHPCVVDGT*KFGVGG
Trigger: ACCACCCACCCCAAACTTCCAGGTTCCATCCACCAC...GCATGGGTGGAGGGTCCCTAATTCTCTTCGCTGTGATGCATGAGCTCCCTCGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS-3UTR CCA 90 bp CGAGGGAGCTCATGCATCACAGCGAAGAGAATTAGGGACCCTCCACCCATGCCCTGGCAAGGTGGTGGATaGAACCTGGAAGTTTGGGGT +
Preference number: 4 (lower is better)
Translates to: RGSSCITAKRIRDPPPMPWQGGG*NLEVWG
Trigger: ACCCCAAACTTCCAGGTTCCATCCACCACCTTGCCA...GGGCATGGGTGGAGGGTCCCTAATTCTCTTCGCTGTGATGCATGAGCTCCCTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS-3UTR TCA 90 bp AGAAACCCAAAGAGAAAAGGAGCACGCCGAGTAAAGAAGGCAAGGAAAGGGCGGGGCGCTCACGGTCTCTaGGTCTGGGTAGACGCATCA +
Preference number: 4 (lower is better)
Translates to: RNPKRKGARRVKKARKGRGAHGL*VWVDAS
Trigger: TGATGCGTCTACCCAGACTCAGAGACCGTGAGCGCC...CCGCCCTTTCCTTGCCTTCTTTACTCGGCGTGCTCCTTTTCTCTTTGGGTTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS-3UTR TCA 90 bp GGAAAGGGCGGGTGCCTTCCACACACAGGAGTTCTGAGAGGACAGCTACACCATATGTGTGTGATCCACTaGGCAAAGACTGCCTGGGCA +
Preference number: 4 (lower is better)
Translates to: GKGGCLPHTGVLRGQLHHMCVIH*AKTAWA
Trigger: TGCCCAGGCAGTCTTTGCTCAGTGGATCACACACAT...ATGGTGTAGCTGTCCTCTCAGAACTCCTGTGTGTGGAAGGCACCCGCCCTTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS-3UTR GCA 90 bp CGGTCTCTGAGTCTGGGTAGACGCATCAGGGCAGCAGAAGCAGGGTTTGGGGGACACTCTTTGACATCATaGCAGAGCCTTTCCTTGCCT +
Preference number: 4 (lower is better)
Translates to: RSLSLGRRIRAAEAGFGGHSLTS*QSLSLP
Trigger: AGGCAAGGAAAGGCTCTGGCATGATGTCAAAGAGTG...TCCCCCAAACCCTGCTTCTGCTGCCCTGATGCGTCTACCCAGACTCAGAGACCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS-3UTR GCA 90 bp GGAAAGGGCGGGTGCCTTCCACACACAGGAGTTCTGAGAGGACAGCTACACCATGATCTGCGCCAGCTCTaGCATCTCGATTTTCCCATC +
Preference number: 4 (lower is better)
Translates to: GKGGCLPHTGVLRGQLHHDLRQL*HLDFPI
Trigger: GATGGGAAAATCGAGATGGCAGAGCTGGCGCAGATC...ATGGTGTAGCTGTCCTCTCAGAACTCCTGTGTGTGGAAGGCACCCGCCCTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS-3UTR GCA 90 bp GCCCCCATCACCTTCCATGTGTGTGATCCACTGAGCAAAGACTGCCTGGGCAGGCTGAGAGGCCCAATTTaGCATCCCCGTTCAAGTCAA +
Preference number: 4 (lower is better)
Translates to: APITFHVCDPLSKDCLGRLRGPI*HPRSSQ
Trigger: TTGACTTGAACGGGGATGGCAAATTGGGCCTCTCAG...CCTGCCCAGGCAGTCTTTGCTCAGTGGATCACACACATGGAAGGTGATGGGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS-3UTR GCA 90 bp GTGCCTTCCACACACAGGAGTTCTGAGAGGACAGCTACACCATTGGCAAGGTGGGAGCTTCCCTGCCTCTaGCAAGGACATGACGCTCTT +
Preference number: 4 (lower is better)
Translates to: VPSTHRSSERTATPLARWELPCL*QGHDAL
Trigger: AAGAGCGTCATGTCCTTGGCAGAGGCAGGGAAGCTC...CCACCTTGCCAATGGTGTAGCTGTCCTCTCAGAACTCCTGTGTGTGGAAGGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS-3UTR GCA 90 bp TCCACCCATGCCCCCATCACCTTCCATGTGTGTGATCCACTGAGCAAAGACTGCGAGCTTCCCTGCCTCTaGCAAGGACATGACGCTCTT +
Preference number: 4 (lower is better)
Translates to: STHAPITFHVCDPLSKDCELPCL*QGHDAL
Trigger: AAGAGCGTCATGTCCTTGGCAGAGGCAGGGAAGCTC...GCAGTCTTTGCTCAGTGGATCACACACATGGAAGGTGATGGGGGCATGGGTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS-3UTR GCA 90 bp AGCACGCCGAGTAAAGAAGGCAAGGAAAGGGCGGGTGCCTTCCACACACAGGAGCAGCGAGGGAGCTCATaGATCACAGCGAAGAGAATT +
Preference number: 4 (lower is better)
Translates to: STPSKEGKERAGAFHTQEQRGSS*ITAKRI
Trigger: AATTCTCTTCGCTGTGATGCATGAGCTCCCTCGCTG...CTCCTGTGTGTGGAAGGCACCCGCCCTTTCCTTGCCTTCTTTACTCGGCGTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS-3UTR GCA 90 bp GAGAGGACAGCTACACCATTGGCAAGGTGGTGGATGGAACCTGGAAGTTTGGGGCAAGGAAAGGGCGGGTaGCTTCCACACACAGGAGTT +
Preference number: 4 (lower is better)
Translates to: ERTATPLARWWMEPGSLGQGKGG*LPHTGV
Trigger: AACTCCTGTGTGTGGAAGGCACCCGCCCTTTCCTTG...CCCCAAACTTCCAGGTTCCATCCACCACCTTGCCAATGGTGTAGCTGTCCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS-3UTR CCA 90 bp AGAATTAGGGACCCTCCACCCATGCCCCCATCACCTTCCATGTGTGTGATCCACAGCAGGAAGTTTTCCTaGACAGGCAGGAGTCGGGAC +
Preference number: 4 (lower is better)
Translates to: RIRDPPPMPPSPSMCVIHSRKFS*TGRSRD
Trigger: GTCCCGACTCCTGCCTGTCCAGGAAAACTTCCTGCT...GTGGATCACACACATGGAAGGTGATGGGGGCATGGGTGGAGGGTCCCTAATTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302628.9
ENST00000635371.2
CDS-3UTR CCA 90 bp GTTGGACATAGAAGCCTAAATCATACAGCGAGGGAGCTCATGCATCACAGCGAAAGGGTTTGGGGGAGGTaGAGAAGCAGCCCCCGTCCC +
Preference number: 4 (lower is better)
Translates to: VGHRSLNHTARELMHHSERVWGR*RSSPRP
Trigger: GGGACGGGGGCTGCTTCTCCACCTCCCCCAAACCCT...TTCGCTGTGATGCATGAGCTCCCTCGCTGTATGATTTAGGCTTCTATGTCCAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS-3UTR CCA 90 bp AAGCCTAAATCATACAGCGAGGGAGCTCATGCATCACAGCGAAGAGAATTAGGGAGGGTTTGGGGGAGGTaGAGAAGCAGCCCCCGTCCC +
Preference number: 4 (lower is better)
Translates to: KPKSYSEGAHASQRRELGRVWGR*RSSPRP
Trigger: GGGACGGGGGCTGCTTCTCCACCTCCCCCAAACCCT...CCCTAATTCTCTTCGCTGTGATGCATGAGCTCCCTCGCTGTATGATTTAGGCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS-3UTR CCA 90 bp CACACAGGAGTTCTGAGAGGACAGCTACACCATTGGCAAGGTGGTGGATGGAACAGCAGAAGCAGGGTTTaGGGGAGGTGGAGAAGCAGC +
Preference number: 4 (lower is better)
Translates to: HTGVLRGQLHHWQGGGWNSRSRV*GRWRSS
Trigger: GCTGCTTCTCCACCTCCCCCAAACCCTGCTTCTGCT...GTTCCATCCACCACCTTGCCAATGGTGTAGCTGTCCTCTCAGAACTCCTGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS-3UTR CCA 90 bp AAGCCTAAATCATACAGCGAGGGAGCTCATGCATCACAGCGAAGAGAATTAGGGGTTTGGGGTGGGTGGTaGCATGGGGGACCGGCAGAG +
Preference number: 4 (lower is better)
Translates to: KPKSYSEGAHASQRRELGVWGGW*HGGPAE
Trigger: CTCTGCCGGTCCCCCATGCCACCACCCACCCCAAAC...CCCTAATTCTCTTCGCTGTGATGCATGAGCTCCCTCGCTGTATGATTTAGGCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS-3UTR CCA 90 bp AGGAAAGGGCGGGTGCCTTCCACACACAGGAGTTCTGAGAGGACAGCTACACCATGGCAAGGTGGTGGATaGAACCTGGAAGTTTGGGGT +
Preference number: 4 (lower is better)
Translates to: RKGRVPSTHRSSERTATPWQGGG*NLEVWG
Trigger: ACCCCAAACTTCCAGGTTCCATCCACCACCTTGCCA...TGGTGTAGCTGTCCTCTCAGAACTCCTGTGTGTGGAAGGCACCCGCCCTTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS-3UTR CCA 90 bp AGGCAAGGAAAGGGCGGGTGCCTTCCACACACAGGAGTTCTGAGAGGACAGCTAGGACAGCTACACCATTaGCAAGGTGGTGGATGGAAC +
Preference number: 4 (lower is better)
Translates to: RQGKGGCLPHTGVLRGQLGQLHH*QGGGWN
Trigger: GTTCCATCCACCACCTTGCCAATGGTGTAGCTGTCC...TAGCTGTCCTCTCAGAACTCCTGTGTGTGGAAGGCACCCGCCCTTTCCTTGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS-3UTR TCA 90 bp AAGAAGGCAAGGAAAGGGCGGGTGCCTTCCACACACAGGAGTTCTGAGAGGACAATGTGTGTGATCCACTaGGCAAAGACTGCCTGGGCA +
Preference number: 4 (lower is better)
Translates to: KKARKGRVPSTHRSSERTMCVIH*AKTAWA
Trigger: TGCCCAGGCAGTCTTTGCTCAGTGGATCACACACAT...TGTCCTCTCAGAACTCCTGTGTGTGGAAGGCACCCGCCCTTTCCTTGCCTTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS-3UTR TCA 90 bp AAGGCAAGGAAAGGGCGGGTGCCTTCCACACACAGGAGTTCTGAGAGGACAGCTCACCTTCCATGTGTGTaGTCCACTGAGCAAAGACTG +
Preference number: 4 (lower is better)
Translates to: KARKGRVPSTHRSSERTAHLPCV*STEQRL
Trigger: CAGTCTTTGCTCAGTGGATCACACACATGGAAGGTG...AGCTGTCCTCTCAGAACTCCTGTGTGTGGAAGGCACCCGCCCTTTCCTTGCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS-3UTR TCA 90 bp AGGCAAGGAAAGGGCGGGTGCCTTCCACACACAGGAGTTCTGAGAGGACAGCTACACACACAGGAGTTCTaGGAGGACAGCTACACCATT +
Preference number: 4 (lower is better)
Translates to: RQGKGGCLPHTGVLRGQLHTQEF*EDSYTI
Trigger: AATGGTGTAGCTGTCCTCTCAGAACTCCTGTGTGTG...TAGCTGTCCTCTCAGAACTCCTGTGTGTGGAAGGCACCCGCCCTTTCCTTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS-3UTR GCA 90 bp GACAGCTACACCATTGGCAAGGTGGTGGATGGAACCTGGAAGTTTGGGGTGGGTGATCTGCGCCAGCTCTaGCATCTCGATTTTCCCATC +
Preference number: 4 (lower is better)
Translates to: DSYTIGKVVDGTWKFGVGDLRQL*HLDFPI
Trigger: GATGGGAAAATCGAGATGGCAGAGCTGGCGCAGATC...ACCCACCCCAAACTTCCAGGTTCCATCCACCACCTTGCCAATGGTGTAGCTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS-3UTR GCA 90 bp GTTGGACATAGAAGCCTAAATCATACAGCGAGGGAGCTCATGCATCACAGCGAAGCGCTGGAGCCCACGTaGTGCCTGAAGCACAGAAGG +
Preference number: 4 (lower is better)
Translates to: VGHRSLNHTARELMHHSEALEPT*CLKHRR
Trigger: CCTTCTGTGCTTCAGGCAGCACGTGGGCTCCAGCGC...TTCGCTGTGATGCATGAGCTCCCTCGCTGTATGATTTAGGCTTCTATGTCCAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS-3UTR GCA 90 bp CTGAGAGGACAGCTACACCATTGGCAAGGTGGTGGATGGAACCTGGAAGTTTGGGAGCTTCCCTGCCTCTaGCAAGGACATGACGCTCTT +
Preference number: 4 (lower is better)
Translates to: LRGQLHHWQGGGWNLEVWELPCL*QGHDAL
Trigger: AAGAGCGTCATGTCCTTGGCAGAGGCAGGGAAGCTC...CCAAACTTCCAGGTTCCATCCACCACCTTGCCAATGGTGTAGCTGTCCTCTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS-3UTR GCA 90 bp AGAAACCCAAAGAGAAAAGGAGCACGCCGAGTAAAGAAGGCAAGGAAAGGGCGGGCGGTAGAGCTTCCCTaGCTCTGCCAAGGACATGAC +
Preference number: 4 (lower is better)
Translates to: RNPKRKGARRVKKARKGRAVELP*LCQGHD
Trigger: GTCATGTCCTTGGCAGAGGCAGGGAAGCTCTACCGC...CCGCCCTTTCCTTGCCTTCTTTACTCGGCGTGCTCCTTTTCTCTTTGGGTTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS-3UTR GCA 90 bp CACACAGGAGTTCTGAGAGGACAGCTACACCATTGGCAAGGTGGTGGATGGAACCAATCTCCAGGTCCTTaGGGTAGAGCTTCCCTGCCT +
Preference number: 4 (lower is better)
Translates to: HTGVLRGQLHHWQGGGWNQSPGP*GRASLP
Trigger: AGGCAGGGAAGCTCTACCGCAAGGACCTGGAGATTG...GTTCCATCCACCACCTTGCCAATGGTGTAGCTGTCCTCTCAGAACTCCTGTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS-3UTR CCA 90 bp CACAGGAGTTCTGAGAGGACAGCTACACCATTGGCAAGGTGGTGGATGGAACCTGAAGTTCTCTTCGGTTaGCAGGATCTGCGCCAGCTC +
Preference number: 4 (lower is better)
Translates to: HRSSERTATPLARWWMEPEVLFG*QDLRQL
Trigger: GAGCTGGCGCAGATCCTGCCAACCGAAGAGAACTTC...AGGTTCCATCCACCACCTTGCCAATGGTGTAGCTGTCCTCTCAGAACTCCTGTG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS-3UTR CCA 90 bp GGAGTTCTGAGAGGACAGCTACACCATTGGCAAGGTGGTGGATGGAACCTGGAAGAAGTTCTCTTCGGTTaGCAGGATCTGCGCCAGCTC +
Preference number: 4 (lower is better)
Translates to: GVLRGQLHHWQGGGWNLEEVLFG*QDLRQL
Trigger: GAGCTGGCGCAGATCCTGCCAACCGAAGAGAACTTC...TTCCAGGTTCCATCCACCACCTTGCCAATGGTGTAGCTGTCCTCTCAGAACTCC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS-3UTR CCA 90 bp CACACAGGAGTTCTGAGAGGACAGCTACACCATTGGCAAGGTGGTGGATGGAACTGTATTCCTGGAGCTTaGGCTCATCGTACGGCCGGT +
Preference number: 4 (lower is better)
Translates to: HTGVLRGQLHHWQGGGWNCIPGA*AHRTAG
Trigger: ACCGGCCGTACGATGAGCCCAAGCTCCAGGAATACA...GTTCCATCCACCACCTTGCCAATGGTGTAGCTGTCCTCTCAGAACTCCTGTGTG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS-3UTR CCA 90 bp AGAAACCCAAAGAGAAAAGGAGCACGCCGAGTAAAGAAGGCAAGGAAAGGGCGGTGGAACCTGGAAGTTTaGGGTGGGTGGTGGCATGGG +
Preference number: 4 (lower is better)
Translates to: RNPKRKGARRVKKARKGRWNLEV*GGWWHG
Trigger: CCCATGCCACCACCCACCCCAAACTTCCAGGTTCCA...CCGCCCTTTCCTTGCCTTCTTTACTCGGCGTGCTCCTTTTCTCTTTGGGTTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS-3UTR CCA 90 bp ACAGCGAAGAGAATTAGGGACCCTCCACCCATGCCCCCATCACCTTCCATGTGTTGGCAAGGTGGTGGATaGAACCTGGAAGTTTGGGGT +
Preference number: 4 (lower is better)
Translates to: TAKRIRDPPPMPPSPSMCWQGGG*NLEVWG
Trigger: ACCCCAAACTTCCAGGTTCCATCCACCACCTTGCCA...ACACATGGAAGGTGATGGGGGCATGGGTGGAGGGTCCCTAATTCTCTTCGCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS-3UTR CCA 90 bp CAGCGAGGGAGCTCATGCATCACAGCGAAGAGAATTAGGGACCCTCCACCCATGCCATTGGCAAGGTGGTaGATGGAACCTGGAAGTTTG +
Preference number: 4 (lower is better)
Translates to: QRGSSCITAKRIRDPPPMPLARW*MEPGSL
Trigger: CAAACTTCCAGGTTCCATCCACCACCTTGCCAATGG...CATGGGTGGAGGGTCCCTAATTCTCTTCGCTGTGATGCATGAGCTCCCTCGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS-3UTR CCA 90 bp AGGAAAGGGCGGGTGCCTTCCACACACAGGAGTTCTGAGAGGACAGCTACACCACCATTGGCAAGGTGGTaGATGGAACCTGGAAGTTTG +
Preference number: 4 (lower is better)
Translates to: RKGRVPSTHRSSERTATPPLARW*MEPGSL
Trigger: CAAACTTCCAGGTTCCATCCACCACCTTGCCAATGG...TGGTGTAGCTGTCCTCTCAGAACTCCTGTGTGTGGAAGGCACCCGCCCTTTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS-3UTR CCA 90 bp GGAAAGGGCGGGTGCCTTCCACACACAGGAGTTCTGAGAGGACAGCTACACCATACACCATTGGCAAGGTaGTGGATGGAACCTGGAAGT +
Preference number: 4 (lower is better)
Translates to: GKGGCLPHTGVLRGQLHHTPLAR*WMEPGS
Trigger: ACTTCCAGGTTCCATCCACCACCTTGCCAATGGTGT...ATGGTGTAGCTGTCCTCTCAGAACTCCTGTGTGTGGAAGGCACCCGCCCTTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS-3UTR CCA 90 bp GTGCCTTCCACACACAGGAGTTCTGAGAGGACAGCTACACCATTGGCAAGGTGGGGACAGCTACACCATTaGCAAGGTGGTGGATGGAAC +
Preference number: 4 (lower is better)
Translates to: VPSTHRSSERTATPLARWGQLHH*QGGGWN
Trigger: GTTCCATCCACCACCTTGCCAATGGTGTAGCTGTCC...CCACCTTGCCAATGGTGTAGCTGTCCTCTCAGAACTCCTGTGTGTGGAAGGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
3UTR CAA 72 bp TCCACACACAGGAGTTCTGAGAGGACAGCTACACCATaGGCAAGGTGGTGGATGGAACCTGGAAGTTTGGGG +
Preference number: 4 (lower is better)
Translates to: STHRSSERTATP*ARWWMEPGSLG
Trigger: CCCCAAACTTCCAGGTTCCATCCACCACCTTGCCAATGGTGTAGCTGTCCTCTCAGAACTCCTGTGTGTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS-3UTR TCA 90 bp CGGTCTCTGAGTCTGGGTAGACGCATCAGGGCAGCAGAAGCAGGGTTTGGGGGAAAAGTTGTCACTCTTTaGCATCATGCCAGAGCCTTT +
Preference number: 4 (lower is better)
Translates to: RSLSLGRRIRAAEAGFGGKVVTL*HHARAF
Trigger: AAAGGCTCTGGCATGATGTCAAAGAGTGACAACTTT...TCCCCCAAACCCTGCTTCTGCTGCCCTGATGCGTCTACCCAGACTCAGAGACCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS-3UTR TCA 90 bp GTTGGACATAGAAGCCTAAATCATACAGCGAGGGAGCTCATGCATCACAGCGAAGGCGCTCACGGTCTCTaGGTCTGGGTAGACGCATCA +
Preference number: 4 (lower is better)
Translates to: VGHRSLNHTARELMHHSEGAHGL*VWVDAS
Trigger: TGATGCGTCTACCCAGACTCAGAGACCGTGAGCGCC...TTCGCTGTGATGCATGAGCTCCCTCGCTGTATGATTTAGGCTTCTATGTCCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS-3UTR TCA 90 bp AGAATTAGGGACCCTCCACCCATGCCCCCATCACCTTCCATGTGTGTGATCCACCACCTTCCATGTGTGTaGTCCACTGAGCAAAGACTG +
Preference number: 4 (lower is better)
Translates to: RIRDPPPMPPSPSMCVIHHLPCV*STEQRL
Trigger: CAGTCTTTGCTCAGTGGATCACACACATGGAAGGTG...GTGGATCACACACATGGAAGGTGATGGGGGCATGGGTGGAGGGTCCCTAATTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS-3UTR TCA 90 bp GTGCCTTCCACACACAGGAGTTCTGAGAGGACAGCTACACCATTGGCAAGGTGGCACACACAGGAGTTCTaGGAGGACAGCTACACCATT +
Preference number: 4 (lower is better)
Translates to: VPSTHRSSERTATPLARWHTQEF*EDSYTI
Trigger: AATGGTGTAGCTGTCCTCTCAGAACTCCTGTGTGTG...CCACCTTGCCAATGGTGTAGCTGTCCTCTCAGAACTCCTGTGTGTGGAAGGCAC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS-3UTR TCA 90 bp ACAGCGAAGAGAATTAGGGACCCTCCACCCATGCCCCCATCACCTTCCATGTGTCACACACAGGAGTTCTaGGAGGACAGCTACACCATT +
Preference number: 4 (lower is better)
Translates to: TAKRIRDPPPMPPSPSMCHTQEF*EDSYTI
Trigger: AATGGTGTAGCTGTCCTCTCAGAACTCCTGTGTGTG...ACACATGGAAGGTGATGGGGGCATGGGTGGAGGGTCCCTAATTCTCTTCGCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS-3UTR GCA 90 bp CTGAGTCTGGGTAGACGCATCAGGGCAGCAGAAGCAGGGTTTGGGGGAGGTGGAATACCCATTTCCGTCTaGGTCAAAGTGCTTCCATAT +
Preference number: 4 (lower is better)
Translates to: LSLGRRIRAAEAGFGGGGIPISV*VKVLPY
Trigger: ATATGGAAGCACTTTGACGCAGACGGAAATGGGTAT...TCCACCTCCCCCAAACCCTGCTTCTGCTGCCCTGATGCGTCTACCCAGACTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS-3UTR GCA 90 bp AAGGCAAGGAAAGGGCGGGTGCCTTCCACACACAGGAGTTCTGAGAGGACAGCTCACTCTTTGACATCATaGCAGAGCCTTTCCTTGCCT +
Preference number: 4 (lower is better)
Translates to: KARKGRVPSTHRSSERTAHSLTS*QSLSLP
Trigger: AGGCAAGGAAAGGCTCTGGCATGATGTCAAAGAGTG...AGCTGTCCTCTCAGAACTCCTGTGTGTGGAAGGCACCCGCCCTTTCCTTGCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS-3UTR GCA 90 bp CACAGGAGTTCTGAGAGGACAGCTACACCATTGGCAAGGTGGTGGATGGAACCTGATCTGCGCCAGCTCTaGCATCTCGATTTTCCCATC +
Preference number: 4 (lower is better)
Translates to: HRSSERTATPLARWWMEPDLRQL*HLDFPI
Trigger: GATGGGAAAATCGAGATGGCAGAGCTGGCGCAGATC...AGGTTCCATCCACCACCTTGCCAATGGTGTAGCTGTCCTCTCAGAACTCCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS-3UTR GCA 90 bp CTGAGAGGACAGCTACACCATTGGCAAGGTGGTGGATGGAACCTGGAAGTTTGGGATCTGCGCCAGCTCTaGCATCTCGATTTTCCCATC +
Preference number: 4 (lower is better)
Translates to: LRGQLHHWQGGGWNLEVWDLRQL*HLDFPI
Trigger: GATGGGAAAATCGAGATGGCAGAGCTGGCGCAGATC...CCAAACTTCCAGGTTCCATCCACCACCTTGCCAATGGTGTAGCTGTCCTCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS-3UTR GCA 90 bp AAATCATACAGCGAGGGAGCTCATGCATCACAGCGAAGAGAATTAGGGACCCTCCTGGAGCCCACGTGCTaGCTGAAGCACAGAAGGAAG +
Preference number: 4 (lower is better)
Translates to: KSYSEGAHASQRRELGTLLEPTC*LKHRRK
Trigger: CTTCCTTCTGTGCTTCAGGCAGCACGTGGGCTCCAG...GAGGGTCCCTAATTCTCTTCGCTGTGATGCATGAGCTCCCTCGCTGTATGATTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS-3UTR GCA 90 bp AAGAAGGCAAGGAAAGGGCGGGTGCCTTCCACACACAGGAGTTCTGAGAGGACACAGCGAGGGAGCTCATaGATCACAGCGAAGAGAATT +
Preference number: 4 (lower is better)
Translates to: KKARKGRVPSTHRSSERTQRGSS*ITAKRI
Trigger: AATTCTCTTCGCTGTGATGCATGAGCTCCCTCGCTG...TGTCCTCTCAGAACTCCTGTGTGTGGAAGGCACCCGCCCTTTCCTTGCCTTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS-3UTR GCA 90 bp ACAGCGAAGAGAATTAGGGACCCTCCACCCATGCCCCCATCACCTTCCATGTGTCAGCGAGGGAGCTCATaGATCACAGCGAAGAGAATT +
Preference number: 4 (lower is better)
Translates to: TAKRIRDPPPMPPSPSMCQRGSS*ITAKRI
Trigger: AATTCTCTTCGCTGTGATGCATGAGCTCCCTCGCTG...ACACATGGAAGGTGATGGGGGCATGGGTGGAGGGTCCCTAATTCTCTTCGCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS-3UTR CCA 90 bp CTGAGTCTGGGTAGACGCATCAGGGCAGCAGAAGCAGGGTTTGGGGGAGGTGGAGCCTTCTCCAGCTCTTaGAAAAAGTTTTCTAGCTCT +
Preference number: 4 (lower is better)
Translates to: LSLGRRIRAAEAGFGGGGAFSSS*KKFSSS
Trigger: AGAGCTAGAAAACTTTTTCCAAGAGCTGGAGAAGGC...TCCACCTCCCCCAAACCCTGCTTCTGCTGCCCTGATGCGTCTACCCAGACTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS-3UTR CCA 90 bp AGAAACCCAAAGAGAAAAGGAGCACGCCGAGTAAAGAAGGCAAGGAAAGGGCGGTGTATTCCTGGAGCTTaGGCTCATCGTACGGCCGGT +
Preference number: 4 (lower is better)
Translates to: RNPKRKGARRVKKARKGRCIPGA*AHRTAG
Trigger: ACCGGCCGTACGATGAGCCCAAGCTCCAGGAATACA...CCGCCCTTTCCTTGCCTTCTTTACTCGGCGTGCTCCTTTTCTCTTTGGGTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS-3UTR CCA 90 bp CGAGGGAGCTCATGCATCACAGCGAAGAGAATTAGGGACCCTCCACCCATGCCCATCCGTAGTATGGTTTaGGTGTATTCCTGGAGCTTG +
Preference number: 4 (lower is better)
Translates to: RGSSCITAKRIRDPPPMPIRSMV*VYSWSL
Trigger: CAAGCTCCAGGAATACACCCAAACCATACTACGGAT...GGGCATGGGTGGAGGGTCCCTAATTCTCTTCGCTGTGATGCATGAGCTCCCTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS-3UTR CCA 90 bp TACAGCGAGGGAGCTCATGCATCACAGCGAAGAGAATTAGGGACCCTCCACCCAACACCATTGGCAAGGTaGTGGATGGAACCTGGAAGT +
Preference number: 4 (lower is better)
Translates to: YSEGAHASQRRELGTLHPTPLAR*WMEPGS
Trigger: ACTTCCAGGTTCCATCCACCACCTTGCCAATGGTGT...TGGGTGGAGGGTCCCTAATTCTCTTCGCTGTGATGCATGAGCTCCCTCGCTGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS-3UTR CCA 90 bp ACAGCGAAGAGAATTAGGGACCCTCCACCCATGCCCCCATCACCTTCCATGTGTACACCATTGGCAAGGTaGTGGATGGAACCTGGAAGT +
Preference number: 4 (lower is better)
Translates to: TAKRIRDPPPMPPSPSMCTPLAR*WMEPGS
Trigger: ACTTCCAGGTTCCATCCACCACCTTGCCAATGGTGT...ACACATGGAAGGTGATGGGGGCATGGGTGGAGGGTCCCTAATTCTCTTCGCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS-3UTR CCA 90 bp CACACAGGAGTTCTGAGAGGACAGCTACACCATTGGCAAGGTGGTGGATGGAACGGACAGCTACACCATTaGCAAGGTGGTGGATGGAAC +
Preference number: 4 (lower is better)
Translates to: HTGVLRGQLHHWQGGGWNGQLHH*QGGGWN
Trigger: GTTCCATCCACCACCTTGCCAATGGTGTAGCTGTCC...GTTCCATCCACCACCTTGCCAATGGTGTAGCTGTCCTCTCAGAACTCCTGTGTG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS-3UTR TCA 90 bp CTGAGAGGACAGCTACACCATTGGCAAGGTGGTGGATGGAACCTGGAAGTTTGGCTGACAGGAATCCCTTaGGCTCATTGGCTTCGATGT +
Preference number: 4 (lower is better)
Translates to: LRGQLHHWQGGGWNLEVWLTGIP*AHWLRC
Trigger: ACATCGAAGCCAATGAGCTCAAGGGATTCCTGTCAG...CCAAACTTCCAGGTTCCATCCACCACCTTGCCAATGGTGTAGCTGTCCTCTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS-3UTR GCA 90 bp TACAGCGAGGGAGCTCATGCATCACAGCGAAGAGAATTAGGGACCCTCCACCCACACTCTTTGACATCATaGCAGAGCCTTTCCTTGCCT +
Preference number: 4 (lower is better)
Translates to: YSEGAHASQRRELGTLHPHSLTS*QSLSLP
Trigger: AGGCAAGGAAAGGCTCTGGCATGATGTCAAAGAGTG...TGGGTGGAGGGTCCCTAATTCTCTTCGCTGTGATGCATGAGCTCCCTCGCTGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS-3UTR GCA 90 bp CTGAGAGGACAGCTACACCATTGGCAAGGTGGTGGATGGAACCTGGAAGTTTGGCTGAGAGGCCCAATTTaGCATCCCCGTTCAAGTCAA +
Preference number: 4 (lower is better)
Translates to: LRGQLHHWQGGGWNLEVWLRGPI*HPRSSQ
Trigger: TTGACTTGAACGGGGATGGCAAATTGGGCCTCTCAG...CCAAACTTCCAGGTTCCATCCACCACCTTGCCAATGGTGTAGCTGTCCTCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS-3UTR GCA 90 bp AAATCATACAGCGAGGGAGCTCATGCATCACAGCGAAGAGAATTAGGGACCCTCGAGCTTCCCTGCCTCTaGCAAGGACATGACGCTCTT +
Preference number: 4 (lower is better)
Translates to: KSYSEGAHASQRRELGTLELPCL*QGHDAL
Trigger: AAGAGCGTCATGTCCTTGGCAGAGGCAGGGAAGCTC...GAGGGTCCCTAATTCTCTTCGCTGTGATGCATGAGCTCCCTCGCTGTATGATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS-3UTR CCA 90 bp AACAAGAAACCCAAAGAGAAAAGGAGCACGCCGAGTAAAGAAGGCAAGGAAAGGCGTCCCCACTTTACATaGGGGGCTCGCTGCAGAGCA +
Preference number: 4 (lower is better)
Translates to: NKKPKEKRSTPSKEGKERRPHFT*GARCRA
Trigger: TGCTCTGCAGCGAGCCCCCCATGTAAAGTGGGGACG...CCTTTCCTTGCCTTCTTTACTCGGCGTGCTCCTTTTCTCTTTGGGTTTCTTGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS-3UTR CCA 90 bp GTTGGACATAGAAGCCTAAATCATACAGCGAGGGAGCTCATGCATCACAGCGAATGGAACCTGGAAGTTTaGGGTGGGTGGTGGCATGGG +
Preference number: 4 (lower is better)
Translates to: VGHRSLNHTARELMHHSEWNLEV*GGWWHG
Trigger: CCCATGCCACCACCCACCCCAAACTTCCAGGTTCCA...TTCGCTGTGATGCATGAGCTCCCTCGCTGTATGATTTAGGCTTCTATGTCCAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS-3UTR CCA 90 bp GGAGTTCTGAGAGGACAGCTACACCATTGGCAAGGTGGTGGATGGAACCTGGAAACACCATTGGCAAGGTaGTGGATGGAACCTGGAAGT +
Preference number: 4 (lower is better)
Translates to: GVLRGQLHHWQGGGWNLETPLAR*WMEPGS
Trigger: ACTTCCAGGTTCCATCCACCACCTTGCCAATGGTGT...TTCCAGGTTCCATCCACCACCTTGCCAATGGTGTAGCTGTCCTCTCAGAACTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS-3UTR TCA 90 bp AGAAGGCAAGGAAAGGGCGGGTGCCTTCCACACACAGGAGTTCTGAGAGGACAGAAAGTTGTCACTCTTTaGCATCATGCCAGAGCCTTT +
Preference number: 4 (lower is better)
Translates to: RRQGKGGCLPHTGVLRGQKVVTL*HHARAF
Trigger: AAAGGCTCTGGCATGATGTCAAAGAGTGACAACTTT...CTGTCCTCTCAGAACTCCTGTGTGTGGAAGGCACCCGCCCTTTCCTTGCCTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS-3UTR TCA 90 bp AAGGCAAGGAAAGGGCGGGTGCCTTCCACACACAGGAGTTCTGAGAGGACAGCTGTCAGCTTCATGCCCTaGAATTTAAGCAGGAAGTTT +
Preference number: 4 (lower is better)
Translates to: KARKGRVPSTHRSSERTAVSFMP*NLSRKF
Trigger: AAACTTCCTGCTTAAATTTCAGGGCATGAAGCTGAC...AGCTGTCCTCTCAGAACTCCTGTGTGTGGAAGGCACCCGCCCTTTCCTTGCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302628.9
ENST00000635371.2
CDS-3UTR GCA 90 bp CACAGGAGTTCTGAGAGGACAGCTACACCATTGGCAAGGTGGTGGATGGAACCTCCGTCTGCGTCAAAGTaGTTCCATATTTCCAGGAAC +
Preference number: 4 (lower is better)
Translates to: HRSSERTATPLARWWMEPPSASK*FHISRN
Trigger: GTTCCTGGAAATATGGAAGCACTTTGACGCAGACGG...AGGTTCCATCCACCACCTTGCCAATGGTGTAGCTGTCCTCTCAGAACTCCTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS-3UTR GCA 90 bp AGAAGGCAAGGAAAGGGCGGGTGCCTTCCACACACAGGAGTTCTGAGAGGACAGATACCCATTTCCGTCTaGGTCAAAGTGCTTCCATAT +
Preference number: 4 (lower is better)
Translates to: RRQGKGGCLPHTGVLRGQIPISV*VKVLPY
Trigger: ATATGGAAGCACTTTGACGCAGACGGAAATGGGTAT...CTGTCCTCTCAGAACTCCTGTGTGTGGAAGGCACCCGCCCTTTCCTTGCCTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS-3UTR GCA 90 bp ACAAGAAACCCAAAGAGAAAAGGAGCACGCCGAGTAAAGAAGGCAAGGAAAGGGCAAGGAAAGGGCGGGTaGCTTCCACACACAGGAGTT +
Preference number: 4 (lower is better)
Translates to: TRNPKRKGARRVKKARKGQGKGG*LPHTGV
Trigger: AACTCCTGTGTGTGGAAGGCACCCGCCCTTTCCTTG...CCCTTTCCTTGCCTTCTTTACTCGGCGTGCTCCTTTTCTCTTTGGGTTTCTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS-3UTR GCA 90 bp GTTGGACATAGAAGCCTAAATCATACAGCGAGGGAGCTCATGCATCACAGCGAACAAGGAAAGGGCGGGTaGCTTCCACACACAGGAGTT +
Preference number: 4 (lower is better)
Translates to: VGHRSLNHTARELMHHSEQGKGG*LPHTGV
Trigger: AACTCCTGTGTGTGGAAGGCACCCGCCCTTTCCTTG...TTCGCTGTGATGCATGAGCTCCCTCGCTGTATGATTTAGGCTTCTATGTCCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS-3UTR CCA 90 bp AGAAGGCAAGGAAAGGGCGGGTGCCTTCCACACACAGGAGTTCTGAGAGGACAGGCCTTCTCCAGCTCTTaGAAAAAGTTTTCTAGCTCT +
Preference number: 4 (lower is better)
Translates to: RRQGKGGCLPHTGVLRGQAFSSS*KKFSSS
Trigger: AGAGCTAGAAAACTTTTTCCAAGAGCTGGAGAAGGC...CTGTCCTCTCAGAACTCCTGTGTGTGGAAGGCACCCGCCCTTTCCTTGCCTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS-3UTR CCA 90 bp AGAATTAGGGACCCTCCACCCATGCCCCCATCACCTTCCATGTGTGTGATCCACATCCGTAGTATGGTTTaGGTGTATTCCTGGAGCTTG +
Preference number: 4 (lower is better)
Translates to: RIRDPPPMPPSPSMCVIHIRSMV*VYSWSL
Trigger: CAAGCTCCAGGAATACACCCAAACCATACTACGGAT...GTGGATCACACACATGGAAGGTGATGGGGGCATGGGTGGAGGGTCCCTAATTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS-3UTR CCA 90 bp AGAAGGCAAGGAAAGGGCGGGTGCCTTCCACACACAGGAGTTCTGAGAGGACAGCAAACATCCGTAGTATaGTTTGGGTGTATTCCTGGA +
Preference number: 4 (lower is better)
Translates to: RRQGKGGCLPHTGVLRGQQTSVV*FGCIPG
Trigger: TCCAGGAATACACCCAAACCATACTACGGATGTTTG...CTGTCCTCTCAGAACTCCTGTGTGTGGAAGGCACCCGCCCTTTCCTTGCCTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS-3UTR CCA 90 bp AAGCCTAAATCATACAGCGAGGGAGCTCATGCATCACAGCGAAGAGAATTAGGGGTGGTGGATGGAACCTaGAAGTTTGGGGTGGGTGGT +
Preference number: 4 (lower is better)
Translates to: KPKSYSEGAHASQRRELGVVDGT*KFGVGG
Trigger: ACCACCCACCCCAAACTTCCAGGTTCCATCCACCAC...CCCTAATTCTCTTCGCTGTGATGCATGAGCTCCCTCGCTGTATGATTTAGGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS-3UTR TCA 90 bp GAGAGGACAGCTACACCATTGGCAAGGTGGTGGATGGAACCTGGAAGTTTGGGGAAAGTTGTCACTCTTTaGCATCATGCCAGAGCCTTT +
Preference number: 4 (lower is better)
Translates to: ERTATPLARWWMEPGSLGKVVTL*HHARAF
Trigger: AAAGGCTCTGGCATGATGTCAAAGAGTGACAACTTT...CCCCAAACTTCCAGGTTCCATCCACCACCTTGCCAATGGTGTAGCTGTCCTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS-3UTR TCA 90 bp AACAAGAAACCCAAAGAGAAAAGGAGCACGCCGAGTAAAGAAGGCAAGGAAAGGCGCGTTAAACTCCTCTaGGGTCAGCTTCATGCCCTG +
Preference number: 4 (lower is better)
Translates to: NKKPKEKRSTPSKEGKERRVKLL*GQLHAL
Trigger: CAGGGCATGAAGCTGACCTCAGAGGAGTTTAACGCG...CCTTTCCTTGCCTTCTTTACTCGGCGTGCTCCTTTTCTCTTTGGGTTTCTTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302628.9
ENST00000635371.2
CDS-3UTR TCA 90 bp ACAAGAAACCCAAAGAGAAAAGGAGCACGCCGAGTAAAGAAGGCAAGGAAAGGGCCTCTGCCAAGGACATaGCGCTCTTTCTGTAGTTGG +
Preference number: 4 (lower is better)
Translates to: TRNPKRKGARRVKKARKGPLPRT*RSFCSW
Trigger: CCAACTACAGAAAGAGCGTCATGTCCTTGGCAGAGG...CCCTTTCCTTGCCTTCTTTACTCGGCGTGCTCCTTTTCTCTTTGGGTTTCTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS-3UTR TCA 90 bp GTTGGACATAGAAGCCTAAATCATACAGCGAGGGAGCTCATGCATCACAGCGAACCTCTGCCAAGGACATaGCGCTCTTTCTGTAGTTGG +
Preference number: 4 (lower is better)
Translates to: VGHRSLNHTARELMHHSEPLPRT*RSFCSW
Trigger: CCAACTACAGAAAGAGCGTCATGTCCTTGGCAGAGG...TTCGCTGTGATGCATGAGCTCCCTCGCTGTATGATTTAGGCTTCTATGTCCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS-3UTR GCA 90 bp ACAGCGAAGAGAATTAGGGACCCTCCACCCATGCCCCCATCACCTTCCATGTGTATACCCATTTCCGTCTaGGTCAAAGTGCTTCCATAT +
Preference number: 4 (lower is better)
Translates to: TAKRIRDPPPMPPSPSMCIPISV*VKVLPY
Trigger: ATATGGAAGCACTTTGACGCAGACGGAAATGGGTAT...ACACATGGAAGGTGATGGGGGCATGGGTGGAGGGTCCCTAATTCTCTTCGCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS-3UTR GCA 90 bp AAGAAGGCAAGGAAAGGGCGGGTGCCTTCCACACACAGGAGTTCTGAGAGGACAATACCCATTTCCGTCTaGGTCAAAGTGCTTCCATAT +
Preference number: 4 (lower is better)
Translates to: KKARKGRVPSTHRSSERTIPISV*VKVLPY
Trigger: ATATGGAAGCACTTTGACGCAGACGGAAATGGGTAT...TGTCCTCTCAGAACTCCTGTGTGTGGAAGGCACCCGCCCTTTCCTTGCCTTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS-3UTR GCA 90 bp GGAAGAGTCCACTCTGTTGGACATAGAAGCCTAAATCATACAGCGAGGGAGCTCCAGCGAGGGAGCTCATaGATCACAGCGAAGAGAATT +
Preference number: 4 (lower is better)
Translates to: GRVHSVGHRSLNHTARELQRGSS*ITAKRI
Trigger: AATTCTCTTCGCTGTGATGCATGAGCTCCCTCGCTG...GAGCTCCCTCGCTGTATGATTTAGGCTTCTATGTCCAACAGAGTGGACTCTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS-3UTR CCA 90 bp AAGAAGGCAAGGAAAGGGCGGGTGCCTTCCACACACAGGAGTTCTGAGAGGACAGCCTTCTCCAGCTCTTaGAAAAAGTTTTCTAGCTCT +
Preference number: 4 (lower is better)
Translates to: KKARKGRVPSTHRSSERTAFSSS*KKFSSS
Trigger: AGAGCTAGAAAACTTTTTCCAAGAGCTGGAGAAGGC...TGTCCTCTCAGAACTCCTGTGTGTGGAAGGCACCCGCCCTTTCCTTGCCTTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS-3UTR CCA 90 bp GAGAGGACAGCTACACCATTGGCAAGGTGGTGGATGGAACCTGGAAGTTTGGGGCAAACATCCGTAGTATaGTTTGGGTGTATTCCTGGA +
Preference number: 4 (lower is better)
Translates to: ERTATPLARWWMEPGSLGQTSVV*FGCIPG
Trigger: TCCAGGAATACACCCAAACCATACTACGGATGTTTG...CCCCAAACTTCCAGGTTCCATCCACCACCTTGCCAATGGTGTAGCTGTCCTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS-3UTR CCA 90 bp AAATCATACAGCGAGGGAGCTCATGCATCACAGCGAAGAGAATTAGGGACCCTCCCATTGGCAAGGTGGTaGATGGAACCTGGAAGTTTG +
Preference number: 4 (lower is better)
Translates to: KSYSEGAHASQRRELGTLPLARW*MEPGSL
Trigger: CAAACTTCCAGGTTCCATCCACCACCTTGCCAATGG...GAGGGTCCCTAATTCTCTTCGCTGTGATGCATGAGCTCCCTCGCTGTATGATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS-3UTR TCA 90 bp CACAGGAGTTCTGAGAGGACAGCTACACCATTGGCAAGGTGGTGGATGGAACCTGTCAGCTTCATGCCCTaGAATTTAAGCAGGAAGTTT +
Preference number: 4 (lower is better)
Translates to: HRSSERTATPLARWWMEPVSFMP*NLSRKF
Trigger: AAACTTCCTGCTTAAATTTCAGGGCATGAAGCTGAC...AGGTTCCATCCACCACCTTGCCAATGGTGTAGCTGTCCTCTCAGAACTCCTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302628.9
ENST00000635371.2
CDS-3UTR TCA 90 bp AAGCCTAAATCATACAGCGAGGGAGCTCATGCATCACAGCGAAGAGAATTAGGGCACCTTCCATGTGTGTaGTCCACTGAGCAAAGACTG +
Preference number: 4 (lower is better)
Translates to: KPKSYSEGAHASQRRELGHLPCV*STEQRL
Trigger: CAGTCTTTGCTCAGTGGATCACACACATGGAAGGTG...CCCTAATTCTCTTCGCTGTGATGCATGAGCTCCCTCGCTGTATGATTTAGGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS-3UTR CCA 90 bp AACAAGAAACCCAAAGAGAAAAGGAGCACGCCGAGTAAAGAAGGCAAGGAAAGGTGGCAAGGTGGTGGATaGAACCTGGAAGTTTGGGGT +
Preference number: 4 (lower is better)
Translates to: NKKPKEKRSTPSKEGKERWQGGG*NLEVWG
Trigger: ACCCCAAACTTCCAGGTTCCATCCACCACCTTGCCA...CCTTTCCTTGCCTTCTTTACTCGGCGTGCTCCTTTTCTCTTTGGGTTTCTTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS-3UTR CCA 90 bp AAATCATACAGCGAGGGAGCTCATGCATCACAGCGAAGAGAATTAGGGACCCTCATCCGTAGTATGGTTTaGGTGTATTCCTGGAGCTTG +
Preference number: 4 (lower is better)
Translates to: KSYSEGAHASQRRELGTLIRSMV*VYSWSL
Trigger: CAAGCTCCAGGAATACACCCAAACCATACTACGGAT...GAGGGTCCCTAATTCTCTTCGCTGTGATGCATGAGCTCCCTCGCTGTATGATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS-3UTR TCA 90 bp GGAAGAGTCCACTCTGTTGGACATAGAAGCCTAAATCATACAGCGAGGGAGCTCAAAGTTGTCACTCTTTaGCATCATGCCAGAGCCTTT +
Preference number: 4 (lower is better)
Translates to: GRVHSVGHRSLNHTARELKVVTL*HHARAF
Trigger: AAAGGCTCTGGCATGATGTCAAAGAGTGACAACTTT...GAGCTCCCTCGCTGTATGATTTAGGCTTCTATGTCCAACAGAGTGGACTCTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS-3UTR CCA 90 bp ACAAGAAACCCAAAGAGAAAAGGAGCACGCCGAGTAAAGAAGGCAAGGAAAGGGATCCGTAGTATGGTTTaGGTGTATTCCTGGAGCTTG +
Preference number: 4 (lower is better)
Translates to: TRNPKRKGARRVKKARKGIRSMV*VYSWSL
Trigger: CAAGCTCCAGGAATACACCCAAACCATACTACGGAT...CCCTTTCCTTGCCTTCTTTACTCGGCGTGCTCCTTTTCTCTTTGGGTTTCTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS-3UTR CCA 90 bp GGACATGACGCTCTTTCTGTAGTTGGTGAGCTGTTGAATATTCATTTCCTTTTTTGTATTCCTGGAGCTTaGGCTCATCGTACGGCCGGT +
Preference number: 4 (lower is better)
Translates to: GHDALSVVGELLNIHFLFCIPGA*AHRTAG
Trigger: ACCGGCCGTACGATGAGCCCAAGCTCCAGGAATACA...AAAAAGGAAATGAATATTCAACAGCTCACCAACTACAGAAAGAGCGTCATGTCC
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000349553.9
ENST00000635154.1
CDS-3UTR CCA 90 bp GTTGGACATAGAAGCCTAAATCATACAGCGAGGGAGCTCATGCATCACAGCGAACAAACATCCGTAGTATaGTTTGGGTGTATTCCTGGA +
Preference number: 4 (lower is better)
Translates to: VGHRSLNHTARELMHHSEQTSVV*FGCIPG
Trigger: TCCAGGAATACACCCAAACCATACTACGGATGTTTG...TTCGCTGTGATGCATGAGCTCCCTCGCTGTATGATTTAGGCTTCTATGTCCAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS-3UTR TCA 90 bp GGACATGACGCTCTTTCTGTAGTTGGTGAGCTGTTGAATATTCATTTCCTTTTTCACACACAGGAGTTCTaGGAGGACAGCTACACCATT +
Preference number: 4 (lower is better)
Translates to: GHDALSVVGELLNIHFLFHTQEF*EDSYTI
Trigger: AATGGTGTAGCTGTCCTCTCAGAACTCCTGTGTGTG...AAAAAGGAAATGAATATTCAACAGCTCACCAACTACAGAAAGAGCGTCATGTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349553.9
ENST00000635154.1
CDS-3UTR CAA 90 bp GGGCTCGCTGCAGAGCACAATCTCCAGGTCCTTGCGGTAGAGCTTCCCTGCCTCGTGTATTCCTGGAGCTaGGGCTCATCGTACGGCCGG +
Preference number: 5 (lower is better)
Translates to: GLAAEHNLQVLAVELPCLVYSWS*GSSYGR
Trigger: CCGGCCGTACGATGAGCCCAAGCTCCAGGAATACAC...GAGGCAGGGAAGCTCTACCGCAAGGACCTGGAGATTGTGCTCTGCAGCGAGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349553.9
ENST00000635154.1
CDS-3UTR CAA 90 bp CGGTCTCTGAGTCTGGGTAGACGCATCAGGGCAGCAGAAGCAGGGTTTGGGGGAGGAAGTTCTCTTCGGTaGGCAGGATCTGCGCCAGCT +
Preference number: 5 (lower is better)
Translates to: RSLSLGRRIRAAEAGFGGGSSLR*AGSAPA
Trigger: AGCTGGCGCAGATCCTGCCAACCGAAGAGAACTTCC...TCCCCCAAACCCTGCTTCTGCTGCCCTGATGCGTCTACCCAGACTCAGAGACCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS-3UTR CAA 90 bp CGGTCTCTGAGTCTGGGTAGACGCATCAGGGCAGCAGAAGCAGGGTTTGGGGGATGCCAGAGCCTTTCCTaGCCTTCTCCAGCTCTTGGA +
Preference number: 5 (lower is better)
Translates to: RSLSLGRRIRAAEAGFGGCQSLS*PSPALG
Trigger: TCCAAGAGCTGGAGAAGGCAAGGAAAGGCTCTGGCA...TCCCCCAAACCCTGCTTCTGCTGCCCTGATGCGTCTACCCAGACTCAGAGACCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS-3UTR CAA 90 bp GCCCCCATCACCTTCCATGTGTGTGATCCACTGAGCAAAGACTGCCTGGGCAGGGGAAGTTCTCTTCGGTaGGCAGGATCTGCGCCAGCT +
Preference number: 5 (lower is better)
Translates to: APITFHVCDPLSKDCLGRGSSLR*AGSAPA
Trigger: AGCTGGCGCAGATCCTGCCAACCGAAGAGAACTTCC...CCTGCCCAGGCAGTCTTTGCTCAGTGGATCACACACATGGAAGGTGATGGGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS-3UTR CAA 90 bp AGAAGGCAAGGAAAGGGCGGGTGCCTTCCACACACAGGAGTTCTGAGAGGACAGGTGTATTCCTGGAGCTaGGGCTCATCGTACGGCCGG +
Preference number: 5 (lower is better)
Translates to: RRQGKGGCLPHTGVLRGQVYSWS*GSSYGR
Trigger: CCGGCCGTACGATGAGCCCAAGCTCCAGGAATACAC...CTGTCCTCTCAGAACTCCTGTGTGTGGAAGGCACCCGCCCTTTCCTTGCCTTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS-3UTR CAA 90 bp TGCATCACAGCGAAGAGAATTAGGGACCCTCCACCCATGCCCCCATCACCTTCCGTGTATTCCTGGAGCTaGGGCTCATCGTACGGCCGG +
Preference number: 5 (lower is better)
Translates to: CITAKRIRDPPPMPPSPSVYSWS*GSSYGR
Trigger: CCGGCCGTACGATGAGCCCAAGCTCCAGGAATACAC...GGAAGGTGATGGGGGCATGGGTGGAGGGTCCCTAATTCTCTTCGCTGTGATGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS GCA 90 bp TACTTCCGCCAAGCCTCCATAAACTCGGCGCTGGAGCCCACGTGCTaGCTGAAGCACAGAAGGAAGTTCTCTTCGGTTGGCAGGATCTGC +
Preference number: 5 (lower is better)
Translates to: YFRQASINSALEPTC*LKHRRKFSSVGRIC
Trigger: GCAGATCCTGCCAACCGAAGAGAACTTCCTTCTGTGCTTCAGGCAGCACGTGGGCTCCAGCGCCGAGTTTATGGAGGCTTGGCGGAAGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000490520.1
ENST00000562305.5
ENST00000634959.1
ENST00000635154.1
ENST00000635371.2
ENST00000635576.1
CDS GCA 90 bp TCGTACTTCCGCCAAGCCTCCATAAACTCGGCGCTGGAGCCCACGTaGTGCCTGAAGCACAGAAGGAAGTTCTCTTCGGTTGGCAGGATC +
Preference number: 5 (lower is better)
Translates to: SYFRQASINSALEPT*CLKHRRKFSSVGRI
Trigger: GATCCTGCCAACCGAAGAGAACTTCCTTCTGTGCTTCAGGCAGCACGTGGGCTCCAGCGCCGAGTTTATGGAGGCTTGGCGGAAGTACGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000490520.1
ENST00000562305.5
ENST00000634959.1
ENST00000635154.1
ENST00000635371.2
ENST00000635576.1
CDS-3UTR CAA 90 bp CAGCGAGGGAGCTCATGCATCACAGCGAAGAGAATTAGGGACCCTCCACCCATGGGAAGTTCTCTTCGGTaGGCAGGATCTGCGCCAGCT +
Preference number: 5 (lower is better)
Translates to: QRGSSCITAKRIRDPPPMGSSLR*AGSAPA
Trigger: AGCTGGCGCAGATCCTGCCAACCGAAGAGAACTTCC...CATGGGTGGAGGGTCCCTAATTCTCTTCGCTGTGATGCATGAGCTCCCTCGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS-3UTR CAA 90 bp AGGAAAGGGCGGGTGCCTTCCACACACAGGAGTTCTGAGAGGACAGCTACACCAGGAAGTTCTCTTCGGTaGGCAGGATCTGCGCCAGCT +
Preference number: 5 (lower is better)
Translates to: RKGRVPSTHRSSERTATPGSSLR*AGSAPA
Trigger: AGCTGGCGCAGATCCTGCCAACCGAAGAGAACTTCC...TGGTGTAGCTGTCCTCTCAGAACTCCTGTGTGTGGAAGGCACCCGCCCTTTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS-3UTR CAA 90 bp GGGCTCGCTGCAGAGCACAATCTCCAGGTCCTTGCGGTAGAGCTTCCCTGCCTCTCTGACAGGAATCCCTaGAGCTCATTGGCTTCGATG +
Preference number: 5 (lower is better)
Translates to: GLAAEHNLQVLAVELPCLSDRNP*SSLASM
Trigger: CATCGAAGCCAATGAGCTCAAGGGATTCCTGTCAGA...GAGGCAGGGAAGCTCTACCGCAAGGACCTGGAGATTGTGCTCTGCAGCGAGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349553.9
ENST00000635154.1
CDS-3UTR CAA 90 bp CTGAGTCTGGGTAGACGCATCAGGGCAGCAGAAGCAGGGTTTGGGGGAGGTGGAAGGACAGCTACACCATaGGCAAGGTGGTGGATGGAA +
Preference number: 5 (lower is better)
Translates to: LSLGRRIRAAEAGFGGGGRTATP*ARWWME
Trigger: TTCCATCCACCACCTTGCCAATGGTGTAGCTGTCCT...TCCACCTCCCCCAAACCCTGCTTCTGCTGCCCTGATGCGTCTACCCAGACTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS-3UTR CAA 90 bp AGGCAAGGAAAGGGCGGGTGCCTTCCACACACAGGAGTTCTGAGAGGACAGCTATGCCAGAGCCTTTCCTaGCCTTCTCCAGCTCTTGGA +
Preference number: 5 (lower is better)
Translates to: RQGKGGCLPHTGVLRGQLCQSLS*PSPALG
Trigger: TCCAAGAGCTGGAGAAGGCAAGGAAAGGCTCTGGCA...TAGCTGTCCTCTCAGAACTCCTGTGTGTGGAAGGCACCCGCCCTTTCCTTGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS-3UTR CAA 90 bp GCCCCCATCACCTTCCATGTGTGTGATCCACTGAGCAAAGACTGCCTGGGCAGGTCTGAGAGGCCCAATTaGCCATCCCCGTTCAAGTCA +
Preference number: 5 (lower is better)
Translates to: APITFHVCDPLSKDCLGRSERPN*PSPFKS
Trigger: TGACTTGAACGGGGATGGCAAATTGGGCCTCTCAGA...CCTGCCCAGGCAGTCTTTGCTCAGTGGATCACACACATGGAAGGTGATGGGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS-3UTR CAA 90 bp GCCCCCATCACCTTCCATGTGTGTGATCCACTGAGCAAAGACTGCCTGGGCAGGAGGACAGCTACACCATaGGCAAGGTGGTGGATGGAA +
Preference number: 5 (lower is better)
Translates to: APITFHVCDPLSKDCLGRRTATP*ARWWME
Trigger: TTCCATCCACCACCTTGCCAATGGTGTAGCTGTCCT...CCTGCCCAGGCAGTCTTTGCTCAGTGGATCACACACATGGAAGGTGATGGGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS-3UTR CAA 90 bp AGAATTAGGGACCCTCCACCCATGCCCCCATCACCTTCCATGTGTGTGATCCACTGCCAGAGCCTTTCCTaGCCTTCTCCAGCTCTTGGA +
Preference number: 5 (lower is better)
Translates to: RIRDPPPMPPSPSMCVIHCQSLS*PSPALG
Trigger: TCCAAGAGCTGGAGAAGGCAAGGAAAGGCTCTGGCA...GTGGATCACACACATGGAAGGTGATGGGGGCATGGGTGGAGGGTCCCTAATTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS-3UTR CAA 90 bp TGCATCACAGCGAAGAGAATTAGGGACCCTCCACCCATGCCCCCATCACCTTCCTCTGAGAGGCCCAATTaGCCATCCCCGTTCAAGTCA +
Preference number: 5 (lower is better)
Translates to: CITAKRIRDPPPMPPSPSSERPN*PSPFKS
Trigger: TGACTTGAACGGGGATGGCAAATTGGGCCTCTCAGA...GGAAGGTGATGGGGGCATGGGTGGAGGGTCCCTAATTCTCTTCGCTGTGATGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS-3UTR CAA 90 bp CATGCCCCCATCACCTTCCATGTGTGTGATCCACTGAGCAAAGACTGCCTGGGCTCTGAGAGGCCCAATTaGCCATCCCCGTTCAAGTCA +
Preference number: 5 (lower is better)
Translates to: HAPITFHVCDPLSKDCLGSERPN*PSPFKS
Trigger: TGACTTGAACGGGGATGGCAAATTGGGCCTCTCAGA...GCCCAGGCAGTCTTTGCTCAGTGGATCACACACATGGAAGGTGATGGGGGCATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS-3UTR CAA 90 bp AGCGAGGGAGCTCATGCATCACAGCGAAGAGAATTAGGGACCCTCCACCCATGCTCTGACAGGAATCCCTaGAGCTCATTGGCTTCGATG +
Preference number: 5 (lower is better)
Translates to: SEGAHASQRRELGTLHPCSDRNP*SSLASM
Trigger: CATCGAAGCCAATGAGCTCAAGGGATTCCTGTCAGA...GCATGGGTGGAGGGTCCCTAATTCTCTTCGCTGTGATGCATGAGCTCCCTCGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS-3UTR CAA 90 bp GACAGCTACACCATTGGCAAGGTGGTGGATGGAACCTGGAAGTTTGGGGTGGGTAGGACAGCTACACCATaGGCAAGGTGGTGGATGGAA +
Preference number: 5 (lower is better)
Translates to: DSYTIGKVVDGTWKFGVGRTATP*ARWWME
Trigger: TTCCATCCACCACCTTGCCAATGGTGTAGCTGTCCT...ACCCACCCCAAACTTCCAGGTTCCATCCACCACCTTGCCAATGGTGTAGCTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS-3UTR CAA 90 bp AAGAAGGCAAGGAAAGGGCGGGTGCCTTCCACACACAGGAGTTCTGAGAGGACATCTGACAGGAATCCCTaGAGCTCATTGGCTTCGATG +
Preference number: 5 (lower is better)
Translates to: KKARKGRVPSTHRSSERTSDRNP*SSLASM
Trigger: CATCGAAGCCAATGAGCTCAAGGGATTCCTGTCAGA...TGTCCTCTCAGAACTCCTGTGTGTGGAAGGCACCCGCCCTTTCCTTGCCTTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS-3UTR CAA 90 bp TCCACCCATGCCCCCATCACCTTCCATGTGTGTGATCCACTGAGCAAAGACTGCTCTGACAGGAATCCCTaGAGCTCATTGGCTTCGATG +
Preference number: 5 (lower is better)
Translates to: STHAPITFHVCDPLSKDCSDRNP*SSLASM
Trigger: CATCGAAGCCAATGAGCTCAAGGGATTCCTGTCAGA...GCAGTCTTTGCTCAGTGGATCACACACATGGAAGGTGATGGGGGCATGGGTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS-3UTR CAA 90 bp GTTGGACATAGAAGCCTAAATCATACAGCGAGGGAGCTCATGCATCACAGCGAAGTGTATTCCTGGAGCTaGGGCTCATCGTACGGCCGG +
Preference number: 5 (lower is better)
Translates to: VGHRSLNHTARELMHHSEVYSWS*GSSYGR
Trigger: CCGGCCGTACGATGAGCCCAAGCTCCAGGAATACAC...TTCGCTGTGATGCATGAGCTCCCTCGCTGTATGATTTAGGCTTCTATGTCCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS GCA 90 bp TTTCCTGGACAGGCAGGAGTCGGGACATCTCTGAGAGGCCCAATTTaGCATCCCCGTTCAAGTCAAACATCCGTAGTATGGTTTGGGTGT +
Preference number: 5 (lower is better)
Translates to: FPGQAGVGTSLRGPI*HPRSSQTSVVWFGC
Trigger: ACACCCAAACCATACTACGGATGTTTGACTTGAACGGGGATGGCAAATTGGGCCTCTCAGAGATGTCCCGACTCCTGCCTGTCCAGGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000562305.5
ENST00000635371.2
ENST00000635576.1
CDS GCA 90 bp TGTCCCTTCTGCCTTAACCAGTCATGGCAGGAAGGTGGCAGTGGGTaGAAGCTTTGGGTAGCCTTTCATTGTGGTGCTTTTCATGTGCGT +
Preference number: 5 (lower is better)
Translates to: CPFCLNQSWQEGGSG*KLWVAFHCGAFHVR
Trigger: ACGCACATGAAAAGCACCACAATGAAAGGCTACCCAAAGCTTGCACCCACTGCCACCTTCCTGCCATGACTGGTTAAGGCAGAAGGGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467817.1
ENST00000634226.1
CDS-3UTR CAA 90 bp GTTGGACATAGAAGCCTAAATCATACAGCGAGGGAGCTCATGCATCACAGCGAATGCCAGAGCCTTTCCTaGCCTTCTCCAGCTCTTGGA +
Preference number: 5 (lower is better)
Translates to: VGHRSLNHTARELMHHSECQSLS*PSPALG
Trigger: TCCAAGAGCTGGAGAAGGCAAGGAAAGGCTCTGGCA...TTCGCTGTGATGCATGAGCTCCCTCGCTGTATGATTTAGGCTTCTATGTCCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS-3UTR CAA 90 bp GTCTGGGTAGACGCATCAGGGCAGCAGAAGCAGGGTTTGGGGGAGGTGGAGAAGATCTTTTCTCCAAAGTaGTCACTCTTTGACATCATG +
Preference number: 5 (lower is better)
Translates to: VWVDASGQQKQGLGEVEKIFSPK*SLFDIM
Trigger: CATGATGTCAAAGAGTGACAACTTTGGAGAAAAGAT...CTTCTCCACCTCCCCCAAACCCTGCTTCTGCTGCCCTGATGCGTCTACCCAGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS-3UTR CAA 90 bp CGGTCTCTGAGTCTGGGTAGACGCATCAGGGCAGCAGAAGCAGGGTTTGGGGGAATCTTTTCTCCAAAGTaGTCACTCTTTGACATCATG +
Preference number: 5 (lower is better)
Translates to: RSLSLGRRIRAAEAGFGGIFSPK*SLFDIM
Trigger: CATGATGTCAAAGAGTGACAACTTTGGAGAAAAGAT...TCCCCCAAACCCTGCTTCTGCTGCCCTGATGCGTCTACCCAGACTCAGAGACCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS-3UTR CAA 90 bp CACACAGGAGTTCTGAGAGGACAGCTACACCATTGGCAAGGTGGTGGATGGAACCAAAGTTGTCACTCTTaGACATCATGCCAGAGCCTT +
Preference number: 5 (lower is better)
Translates to: HTGVLRGQLHHWQGGGWNQSCHS*TSCQSL
Trigger: AAGGCTCTGGCATGATGTCAAAGAGTGACAACTTTG...GTTCCATCCACCACCTTGCCAATGGTGTAGCTGTCCTCTCAGAACTCCTGTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS-3UTR CAA 90 bp AGTCTGGGTAGACGCATCAGGGCAGCAGAAGCAGGGTTTGGGGGAGGTGGAGAAATCTTTTCTCCAAAGTaGTCACTCTTTGACATCATG +
Preference number: 5 (lower is better)
Translates to: SLGRRIRAAEAGFGGGGEIFSPK*SLFDIM
Trigger: CATGATGTCAAAGAGTGACAACTTTGGAGAAAAGAT...TTCTCCACCTCCCCCAAACCCTGCTTCTGCTGCCCTGATGCGTCTACCCAGACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS-3UTR CAA 90 bp AAGCCTAAATCATACAGCGAGGGAGCTCATGCATCACAGCGAAGAGAATTAGGGAGGACAGCTACACCATaGGCAAGGTGGTGGATGGAA +
Preference number: 5 (lower is better)
Translates to: KPKSYSEGAHASQRRELGRTATP*ARWWME
Trigger: TTCCATCCACCACCTTGCCAATGGTGTAGCTGTCCT...CCCTAATTCTCTTCGCTGTGATGCATGAGCTCCCTCGCTGTATGATTTAGGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS-3UTR CAA 90 bp AACAAGAAACCCAAAGAGAAAAGGAGCACGCCGAGTAAAGAAGGCAAGGAAAGGTCTGAGAGGCCCAATTaGCCATCCCCGTTCAAGTCA +
Preference number: 5 (lower is better)
Translates to: NKKPKEKRSTPSKEGKERSERPN*PSPFKS
Trigger: TGACTTGAACGGGGATGGCAAATTGGGCCTCTCAGA...CCTTTCCTTGCCTTCTTTACTCGGCGTGCTCCTTTTCTCTTTGGGTTTCTTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS-3UTR CAA 90 bp AGAAACCCAAAGAGAAAAGGAGCACGCCGAGTAAAGAAGGCAAGGAAAGGGCGGATCTTTTCTCCAAAGTaGTCACTCTTTGACATCATG +
Preference number: 5 (lower is better)
Translates to: RNPKRKGARRVKKARKGRIFSPK*SLFDIM
Trigger: CATGATGTCAAAGAGTGACAACTTTGGAGAAAAGAT...CCGCCCTTTCCTTGCCTTCTTTACTCGGCGTGCTCCTTTTCTCTTTGGGTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS GCA 72 bp GGGCCAGCCATGGCGAGCCGCTCGGAGACCTCAGCCTaGACCGCTCCCGCTCCGCGCCGGCTGGGCTCTGGC +
Preference number: 6 (lower is better)
Translates to: GPAMASRSETSA*TAPAPRRLGSG
Trigger: GCCAGAGCCCAGCCGGCGCGGAGCGGGAGCGGTGCAGGCTGAGGTCTCCGAGCGGCTCGCCATGGCTGGCCC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000635154.1
ENST00000635371.2
CDS CCA 72 bp GGGATGGGAGCAGAGTCAACCCAGAGCTCTAAAGCCTaGGCCCCTGCTGTCCCGACCCATTCCAGGGATGTC +
Preference number: 6 (lower is better)
Translates to: GMGAESTQSSKA*APAVPTHSRDV
Trigger: GACATCCCTGGAATGGGTCGGGACAGCAGGGGCCCAGGCTTTAGAGCTCTGGGTTGACTCTGCTCCCATCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467817.1
ENST00000634226.1
CDS GCA 72 bp CAAGCCTCCATAAACTCGGCGCTGGAGCCCACGTGCTaGCTGAAGCACAGAAGGAAGTTCTCTTCGGTTGGC +
Preference number: 6 (lower is better)
Translates to: QASINSALEPTC*LKHRRKFSSVG
Trigger: GCCAACCGAAGAGAACTTCCTTCTGTGCTTCAGGCAGCACGTGGGCTCCAGCGCCGAGTTTATGGAGGCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000490520.1
ENST00000562305.5
ENST00000634959.1
ENST00000635154.1
ENST00000635371.2
ENST00000635576.1
CDS GCA 72 bp CGCCAAGCCTCCATAAACTCGGCGCTGGAGCCCACGTaGTGCCTGAAGCACAGAAGGAAGTTCTCTTCGGTT +
Preference number: 6 (lower is better)
Translates to: RQASINSALEPT*CLKHRRKFSSV
Trigger: AACCGAAGAGAACTTCCTTCTGTGCTTCAGGCAGCACGTGGGCTCCAGCGCCGAGTTTATGGAGGCTTGGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000490520.1
ENST00000562305.5
ENST00000634959.1
ENST00000635154.1
ENST00000635371.2
ENST00000635576.1
CDS CCA 72 bp GTGCTGCCTGAAGCACAGAAGGAAGTTCTCTTCGGTTaGCAGGATCTGCGCCAGCATGCCAGAGCCTTTCCT +
Preference number: 6 (lower is better)
Translates to: VLPEAQKEVLFG*QDLRQHARAFP
Trigger: AGGAAAGGCTCTGGCATGCTGGCGCAGATCCTGCCAACCGAAGAGAACTTCCTTCTGTGCTTCAGGCAGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490520.1
ENST00000634959.1
CDS GCA 72 bp CAGGCAGGAGTCGGGACATCTCTGAGAGGCCCAATTTaGCATCCCCGTTCAAGTCAAACATCCGTAGTATGG +
Preference number: 6 (lower is better)
Translates to: QAGVGTSLRGPI*HPRSSQTSVVW
Trigger: CCATACTACGGATGTTTGACTTGAACGGGGATGGCAAATTGGGCCTCTCAGAGATGTCCCGACTCCTGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000562305.5
ENST00000635371.2
ENST00000635576.1
CDS CCA 72 bp GTGCTGCCTGAAGCACAGAAGGAAGTTCTCTTCGGTTaGCAGGATCTGCGCCAGCTCTGCCATCTCGATTTT +
Preference number: 6 (lower is better)
Translates to: VLPEAQKEVLFG*QDLRQLCHLDF
Trigger: AAAATCGAGATGGCAGAGCTGGCGCAGATCCTGCCAACCGAAGAGAACTTCCTTCTGTGCTTCAGGCAGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302628.9
ENST00000349553.9
ENST00000562305.5
ENST00000635154.1
ENST00000635371.2
ENST00000635576.1
CDS GCA 72 bp CCGCTTCTATCCGGGACATCTCTGAGAGGCCCAATTTaGCATCCCCGTTCAAGTCAAACATCCGTAGTATGG +
Preference number: 6 (lower is better)
Translates to: PLLSGTSLRGPI*HPRSSQTSVVW
Trigger: CCATACTACGGATGTTTGACTTGAACGGGGATGGCAAATTGGGCCTCTCAGAGATGTCCCGGATAGAAGCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349553.9
ENST00000635154.1
CDS GCA 72 bp CCTGGACAGGCAGGAGTATCTCTGAGAGGCCCAATTTaGCATCCCCGTTCAAGTCAAACATCCGTAGTATGG +
Preference number: 6 (lower is better)
Translates to: PGQAGVSLRGPI*HPRSSQTSVVW
Trigger: CCATACTACGGATGTTTGACTTGAACGGGGATGGCAAATTGGGCCTCTCAGAGATACTCCTGCCTGTCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490520.1
ENST00000634959.1
CDS CAA 72 bp ACAGGCAGGAGTCGGGACATCTCTGAGAGGCCCAATTaGCCATCCCCGTTCAAGTCAAACATCCGTAGTATG +
Preference number: 6 (lower is better)
Translates to: TGRSRDISERPN*PSPFKSNIRSM
Trigger: CATACTACGGATGTTTGACTTGAACGGGGATGGCAAATTGGGCCTCTCAGAGATGTCCCGACTCCTGCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000562305.5
ENST00000635371.2
ENST00000635576.1
CDS CAA 72 bp GCCGCTTCTATCCGGGACATCTCTGAGAGGCCCAATTaGCCATCCCCGTTCAAGTCAAACATCCGTAGTATG +
Preference number: 6 (lower is better)
Translates to: AASIRDISERPN*PSPFKSNIRSM
Trigger: CATACTACGGATGTTTGACTTGAACGGGGATGGCAAATTGGGCCTCTCAGAGATGTCCCGGATAGAAGCGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349553.9
ENST00000635154.1
CDS CAA 90 bp TTTTCCTGGACAGGCAGGAGTCGGGACATCTCTGAGAGGCCCAATTaGCCATCCCCGTTCAAGTCAAACATCCGTAGTATGGTTTGGGTG +
Preference number: 6 (lower is better)
Translates to: FSWTGRSRDISERPN*PSPFKSNIRSMVWV
Trigger: CACCCAAACCATACTACGGATGTTTGACTTGAACGGGGATGGCAAATTGGGCCTCTCAGAGATGTCCCGACTCCTGCCTGTCCAGGAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302628.9
ENST00000562305.5
ENST00000635371.2
ENST00000635576.1
CDS CAA 90 bp GTCAATGTAGCCGCTTCTATCCGGGACATCTCTGAGAGGCCCAATTaGCCATCCCCGTTCAAGTCAAACATCCGTAGTATGGTTTGGGTG +
Preference number: 6 (lower is better)
Translates to: VNVAASIRDISERPN*PSPFKSNIRSMVWV
Trigger: CACCCAAACCATACTACGGATGTTTGACTTGAACGGGGATGGCAAATTGGGCCTCTCAGAGATGTCCCGGATAGAAGCGGCTACATTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349553.9
ENST00000635154.1
CDS CAA 72 bp TCCTGGACAGGCAGGAGTATCTCTGAGAGGCCCAATTaGCCATCCCCGTTCAAGTCAAACATCCGTAGTATG +
Preference number: 6 (lower is better)
Translates to: SWTGRSISERPN*PSPFKSNIRSM
Trigger: CATACTACGGATGTTTGACTTGAACGGGGATGGCAAATTGGGCCTCTCAGAGATACTCCTGCCTGTCCAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490520.1
ENST00000634959.1
CDS TCA 72 bp CTTGTCGTAAAATGTGAAGATCGCGTTAAACTCCTCTaGGGTCAGCTTCATGCCCTGAAATTTAAGCAGGAA +
Preference number: 6 (lower is better)
Translates to: LVVKCEDRVKLL*GQLHALKFKQE
Trigger: TTCCTGCTTAAATTTCAGGGCATGAAGCTGACCTCAGAGGAGTTTAACGCGATCTTCACATTTTACGACAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302628.9
ENST00000490520.1
ENST00000562305.5
ENST00000634959.1
ENST00000635371.2
ENST00000635576.1