Pregenerated sensors for CAHM (Homo sapiens)
Ensembl gene IDs: ENSG00000270419Ensembl transcript IDs: ENST00000604200.1
Found 24 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GAACACCGAAAGAAGCCACGGCGGCGACGGGAGGGGCGTCGCGCGTaGTTCCCTCGGCGACAAAGCGGGAGCCGGGCGCGCCGGCCGAGG | + |
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Preference number: 5 (lower is better) Translates to: EHRKKPRRRREGRRA*FPRRQSGSRARRPR Trigger: CCTCGGCCGGCGCGCCCGGCTCCCGCTTTGTCGCCGAGGGAAGCACGCGCGACGCCCCTCCCGTCGCCGCCGTGGCTTCTTTCGGTGTTC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000604200.1 |
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| CDS CCA 90 bp | CGCCGCCCCGTGGGTGCGCACGCGTGTCCGCGCAGGCTTCCCGCCTaGCGAGTGCAAGGCTCCTCTCCGCCGTGCTGCTTTCCAGCCTCT | + |
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Preference number: 5 (lower is better) Translates to: RRPVGAHACPRRLPA*RVQGSSPPCCFPAS Trigger: AGAGGCTGGAAAGCAGCACGGCGGAGAGGAGCCTTGCACTCGCCAGGCGGGAAGCCTGCGCGGACACGCGTGCGCACCCACGGGGCGGCG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000604200.1 |
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| CDS GCA 90 bp | CGCAGGCTTCCCGCCTGGCGAGTGCAAGGCTCCTCTCCGCCGTGCTaGTTTCCAGCCTCTCAGCAAATCACGAACACCGAAAGAAGCCAC | + |
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Preference number: 5 (lower is better) Translates to: RRLPAWRVQGSSPPC*FPASQQITNTERSH Trigger: GTGGCTTCTTTCGGTGTTCGTGATTTGCTGAGAGGCTGGAAAGCAGCACGGCGGAGAGGAGCCTTGCACTCGCCAGGCGGGAAGCCTGCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000604200.1 |
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| CDS GCA 90 bp | TGCGCTCGGGTCTGGCTACGATTTGCTTTCAGAATAACGGGAAGGTaGAACAAGATCGCTTCCCTAGAGGCGCGTCGCCCGCGTGGCCCG | + |
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Preference number: 5 (lower is better) Translates to: CARVWLRFAFRITGR*NKIASLEARRPRGP Trigger: CGGGCCACGCGGGCGACGCGCCTCTAGGGAAGCGATCTTGTTGCACCTTCCCGTTATTCTGAAAGCAAATCGTAGCCAGACCCGAGCGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000604200.1 |
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| CDS TCA 90 bp | CACGGAACACTGACGCCATCGCGAAGGAAGCATTTCGAGCACGACTaGCGCTCCCCTTATTATTTGCTAAGCCGCTGCGCTCGGGTCTGG | + |
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Preference number: 5 (lower is better) Translates to: HGTLTPSRRKHFEHD*RSPYYLLSRCARVW Trigger: CCAGACCCGAGCGCAGCGGCTTAGCAAATAATAAGGGGAGCGTCAGTCGTGCTCGAAATGCTTCCTTCGCGATGGCGTCAGTGTTCCGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000604200.1 |
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| CDS TCA 90 bp | CAGCCTCTTTATTTCCTACTGCGGCTTCATTCCCTCACGGAACACTaGCGCCATCGCGAAGGAAGCATTTCGAGCACGACTGACGCTCCC | + |
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Preference number: 5 (lower is better) Translates to: QPLYFLLRLHSLTEH*RHREGSISSTTDAP Trigger: GGGAGCGTCAGTCGTGCTCGAAATGCTTCCTTCGCGATGGCGTCAGTGTTCCGTGAGGGAATGAAGCCGCAGTAGGAAATAAAGAGGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000604200.1 |
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| CDS GCA 90 bp | GACTTCTGCTTTTCAGACTACGCGCACAGCCTCTTTATTTCCTACTaGGGCTTCATTCCCTCACGGAACACTGACGCCATCGCGAAGGAA | + |
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Preference number: 5 (lower is better) Translates to: DFCFSDYAHSLFISY*GFIPSRNTDAIAKE Trigger: TTCCTTCGCGATGGCGTCAGTGTTCCGTGAGGGAATGAAGCCGCAGTAGGAAATAAAGAGGCTGTGCGCGTAGTCTGAAAAGCAGAAGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000604200.1 |
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| CDS GCA 90 bp | CCCTTATTATTTGCTAAGCCGCTGCGCTCGGGTCTGGCTACGATTTaGTTTCAGAATAACGGGAAGGTGCAACAAGATCGCTTCCCTAGA | + |
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Preference number: 5 (lower is better) Translates to: PLLFAKPLRSGLATI*FQNNGKVQQDRFPR Trigger: TCTAGGGAAGCGATCTTGTTGCACCTTCCCGTTATTCTGAAAGCAAATCGTAGCCAGACCCGAGCGCAGCGGCTTAGCAAATAATAAGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000604200.1 |
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| CDS GCA 90 bp | CTCTTGCCTCCGTATTCTTTCTTCATCTGTAAAAATGTTGACTTCTaGTTTTCAGACTACGCGCACAGCCTCTTTATTTCCTACTGCGGC | + |
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Preference number: 5 (lower is better) Translates to: LLPPYSFFICKNVDF*FSDYAHSLFISYCG Trigger: GCCGCAGTAGGAAATAAAGAGGCTGTGCGCGTAGTCTGAAAAGCAGAAGTCAACATTTTTACAGATGAAGAAAGAATACGGAGGCAAGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000604200.1 |
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| CDS GCA 90 bp | AAGTCTAAATGTTGGAAATCCACCAAACTGCAGAGAAAGACCTCTTaGCTCCGTATTCTTTCTTCATCTGTAAAAATGTTGACTTCTGCT | + |
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Preference number: 5 (lower is better) Translates to: KSKCWKSTKLQRKTS*LRILSSSVKMLTSA Trigger: AGCAGAAGTCAACATTTTTACAGATGAAGAAAGAATACGGAGGCAAGAGGTCTTTCTCTGCAGTTTGGTGGATTTCCAACATTTAGACTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000604200.1 |
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| CDS CCA 72 bp | CGCCCCACCTCCGCCCCGCAGCCAAGACCCGCGCCGTaGCGGGCCCGACGGCCAAGGAAAGCCCACCAGCCC | + |
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Preference number: 6 (lower is better) Translates to: RPTSAPQPRPAP*RARRPRKAHQP Trigger: GGGCTGGTGGGCTTTCCTTGGCCGTCGGGCCCGCCACGGCGCGGGTCTTGGCTGCGGGGCGGAGGTGGGGCG 79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000604200.1 |
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| CDS GCA 72 bp | AAGAAGCCACGGCGGCGACGGGAGGGGCGTCGCGCGTaGTTCCCTCGGCGACAAAGCGGGAGCCGGGCGCGC | + |
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Preference number: 6 (lower is better) Translates to: KKPRRRREGRRA*FPRRQSGSRAR Trigger: GCGCGCCCGGCTCCCGCTTTGTCGCCGAGGGAAGCACGCGCGACGCCCCTCCCGTCGCCGCCGTGGCTTCTT 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000604200.1 |
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| CDS CCA 72 bp | CGACGGCCAAGGAAAGCCCACCAGCCCTCCGCACCGTaGGCGACGGGCCAAGACCCGGCCCTAAACGGCCAG | + |
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Preference number: 6 (lower is better) Translates to: RRPRKAHQPSAP*ATGQDPALNGQ Trigger: CTGGCCGTTTAGGGCCGGGTCTTGGCCCGTCGCCCACGGTGCGGAGGGCTGGTGGGCTTTCCTTGGCCGTCG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000604200.1 |
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| CDS GCA 72 bp | CGCACGCGTGTCCGCGCAGGCTTCCCGCCTGGCGAGTaGAAGGCTCCTCTCCGCCGTGCTGCTTTCCAGCCT | + |
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Preference number: 6 (lower is better) Translates to: RTRVRAGFPPGE*KAPLRRAAFQP Trigger: AGGCTGGAAAGCAGCACGGCGGAGAGGAGCCTTGCACTCGCCAGGCGGGAAGCCTGCGCGGACACGCGTGCG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000604200.1 |
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| CDS CCA 72 bp | GTGGGTGCGCACGCGTGTCCGCGCAGGCTTCCCGCCTaGCGAGTGCAAGGCTCCTCTCCGCCGTGCTGCTTT | + |
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Preference number: 6 (lower is better) Translates to: VGAHACPRRLPA*RVQGSSPPCCF Trigger: AAAGCAGCACGGCGGAGAGGAGCCTTGCACTCGCCAGGCGGGAAGCCTGCGCGGACACGCGTGCGCACCCAC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000604200.1 |
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| CDS TCA 72 bp | CTGACGCCATCGCGAAGGAAGCATTTCGAGCACGACTaGCGCTCCCCTTATTATTTGCTAAGCCGCTGCGCT | + |
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Preference number: 6 (lower is better) Translates to: LTPSRRKHFEHD*RSPYYLLSRCA Trigger: AGCGCAGCGGCTTAGCAAATAATAAGGGGAGCGTCAGTCGTGCTCGAAATGCTTCCTTCGCGATGGCGTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000604200.1 |
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| CDS GCA 72 bp | GTCTGGCTACGATTTGCTTTCAGAATAACGGGAAGGTaGAACAAGATCGCTTCCCTAGAGGCGCGTCGCCCG | + |
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Preference number: 6 (lower is better) Translates to: VWLRFAFRITGR*NKIASLEARRP Trigger: CGGGCGACGCGCCTCTAGGGAAGCGATCTTGTTGCACCTTCCCGTTATTCTGAAAGCAAATCGTAGCCAGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000604200.1 |
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| CDS TCA 72 bp | TATTTCCTACTGCGGCTTCATTCCCTCACGGAACACTaGCGCCATCGCGAAGGAAGCATTTCGAGCACGACT | + |
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Preference number: 6 (lower is better) Translates to: YFLLRLHSLTEH*RHREGSISSTT Trigger: AGTCGTGCTCGAAATGCTTCCTTCGCGATGGCGTCAGTGTTCCGTGAGGGAATGAAGCCGCAGTAGGAAATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000604200.1 |
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| CDS GCA 72 bp | TTTGCTAAGCCGCTGCGCTCGGGTCTGGCTACGATTTaGTTTCAGAATAACGGGAAGGTGCAACAAGATCGC | + |
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Preference number: 6 (lower is better) Translates to: FAKPLRSGLATI*FQNNGKVQQDR Trigger: GCGATCTTGTTGCACCTTCCCGTTATTCTGAAAGCAAATCGTAGCCAGACCCGAGCGCAGCGGCTTAGCAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000604200.1 |
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| CDS GCA 72 bp | TTTTCAGACTACGCGCACAGCCTCTTTATTTCCTACTaGGGCTTCATTCCCTCACGGAACACTGACGCCATC | + |
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Preference number: 6 (lower is better) Translates to: FSDYAHSLFISY*GFIPSRNTDAI Trigger: GATGGCGTCAGTGTTCCGTGAGGGAATGAAGCCGCAGTAGGAAATAAAGAGGCTGTGCGCGTAGTCTGAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000604200.1 |
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| CDS CCA 72 bp | TCCCCTTATTATTTGCTAAGCCGCTGCGCTCGGGTCTaGCTACGATTTGCTTTCAGAATAACGGGAAGGTGC | + |
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Preference number: 6 (lower is better) Translates to: SPYYLLSRCARV*LRFAFRITGRC Trigger: GCACCTTCCCGTTATTCTGAAAGCAAATCGTAGCCAGACCCGAGCGCAGCGGCTTAGCAAATAATAAGGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000604200.1 |
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| CDS CAA 72 bp | TTAGGGACTGCCGACTTCTATAGATCAAGGACTTCATaGGTGCAGCTGAGGAAATTCTTCCAAACAAGTCTA | + |
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Preference number: 6 (lower is better) Translates to: LGTADFYRSRTS*VQLRKFFQTSL Trigger: TAGACTTGTTTGGAAGAATTTCCTCAGCTGCACCAATGAAGTCCTTGATCTATAGAAGTCGGCAGTCCCTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000604200.1 |
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| CDS CAA 90 bp | GACGTAGATTTAGGGACTGCCGACTTCTATAGATCAAGGACTTCATaGGTGCAGCTGAGGAAATTCTTCCAAACAAGTCTAAATGTTGGA | + |
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Preference number: 6 (lower is better) Translates to: DVDLGTADFYRSRTS*VQLRKFFQTSLNVG Trigger: TCCAACATTTAGACTTGTTTGGAAGAATTTCCTCAGCTGCACCAATGAAGTCCTTGATCTATAGAAGTCGGCAGTCCCTAAATCTACGTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000604200.1 |
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| CDS GCA 72 bp | TGTTGGAAATCCACCAAACTGCAGAGAAAGACCTCTTaGCTCCGTATTCTTTCTTCATCTGTAAAAATGTTG | + |
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Preference number: 6 (lower is better) Translates to: CWKSTKLQRKTS*LRILSSSVKML Trigger: CAACATTTTTACAGATGAAGAAAGAATACGGAGGCAAGAGGTCTTTCTCTGCAGTTTGGTGGATTTCCAACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000604200.1 |
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