RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CAGE1 (Homo sapiens)

Ensembl gene IDs: ENSG00000164304

Ensembl transcript IDs: ENST00000296742.11, ENST00000338150.8, ENST00000379918.8, ENST00000442019.6, ENST00000458291.6, ENST00000502583.6, ENST00000509324.1, ENST00000512086.5, ENST00000512691.1

Found 394 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CAGGCATCTCACAGTTCTCCCGACATGCTTCACTCCTCCAGGAAATaGCTGCCGAAGACCAAGTTGAGACAATTTCTGGCCTCTCCACAC +
Preference number: 1 (lower is better)
Translates to: QASHSSPDMLHSSRK*LPKTKLRQFLASPH
Trigger: GTGTGGAGAGGCCAGAAATTGTCTCAACTTGGTCTTCGGCAGGCATTTCCTGGAGGAGTGAAGCATGTCGGGAGAACTGTGAGATGCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442019.6
3UTR CCA 90 bp TCTTTAACCCTCTTCTCTAAATACAGGTTACTACACTGGAGTTCTTaGATTCGCACTTCCTGCTTTCTGTTAGTATGTTTTAATTTCTGC +
Preference number: 1 (lower is better)
Translates to: SLTLFSKYRLLHWSS*IRTSCFLLVCFNFC
Trigger: GCAGAAATTAAAACATACTAACAGAAAGCAGGAAGTGCGAATCCAAGAACTCCAGTGTAGTAACCTGTATTTAGAGAAGAGGGTTAAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442019.6
3UTR CCA 90 bp ATCTGTAGTTCTTTAACCCTCTTCTCTAAATACAGGTTACTACACTaGAGTTCTTGGATTCGCACTTCCTGCTTTCTGTTAGTATGTTTT +
Preference number: 1 (lower is better)
Translates to: ICSSLTLFSKYRLLH*SSWIRTSCFLLVCF
Trigger: AAAACATACTAACAGAAAGCAGGAAGTGCGAATCCAAGAACTCCAGTGTAGTAACCTGTATTTAGAGAAGAGGGTTAAAGAACTACAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442019.6
3UTR GCA 90 bp TCTTCAACATTCTCCTTTAGCTTATTGATGACATCAATGAACACTTaGTGTTTGGTAATCTTCATCTGTAGTTCTTTAACCCTCTTCTCT +
Preference number: 1 (lower is better)
Translates to: SSTFSFSLLMTSMNT*CLVIFICSSLTLFS
Trigger: AGAGAAGAGGGTTAAAGAACTACAGATGAAGATTACCAAACAGCAAGTGTTCATTGATGTCATCAATAAGCTAAAGGAGAATGTTGAAGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442019.6
3UTR-3UTR GCA 90 bp CATCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGCCTCTCCACACCCTCTaGTGTGACTTCCTTTTCATA +
Preference number: 2 (lower is better)
Translates to: HLHGLIWLAYVVMTLPGVPLHTL*CDFLFI
Trigger: TATGAAAAGGAAGTCACAGCAGAGGGTGTGGAGAGG...CACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442019.6
3UTR-3UTR GCA 90 bp TCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGGTAAGCTTTCAGCACTTTaGTCCCAGTCAGGCATCTCA +
Preference number: 2 (lower is better)
Translates to: SAWIDLASICSNDSSWSGKLSAL*SQSGIS
Trigger: TGAGATGCCTGACTGGGAGCAAAGTGCTGAAAGCTT...ACCACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442019.6
3UTR CAA 90 bp ATCAAGAAATCAAGCTCCTCATTTAGACTGTGGTACTTATCCAGTTaGGCTCCCAGAAGGGTAGGTACATCTCTGATACTCTTGGCTTCA +
Preference number: 2 (lower is better)
Translates to: IKKSSSSFRLWYLSS*APRRVGTSLILLAS
Trigger: TGAAGCCAAGAGTATCAGAGATGTACCTACCCTTCTGGGAGCCAAACTGGATAAGTACCACAGTCTAAATGAGGAGCTTGATTTCTTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442019.6
ENST00000458291.6
3UTR-3UTR TCA 90 bp TCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGGTACTCTTGGCTTCATCTaGATCACAGTCTATGACCTG +
Preference number: 2 (lower is better)
Translates to: SAWIDLASICSNDSSWSGTLGFI*ITVYDL
Trigger: CAGGTCATAGACTGTGATTCAGATGAAGCCAAGAGT...ACCACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458291.6
3UTR-3UTR GCA 90 bp AGTTTTGTGATCAAGAAATCAAGCTCCTCATTTAGACTGTGGTACTTATCCAGTCACTCCTCCAGGAAATaGCTGCCGAAGACCAAGTTG +
Preference number: 2 (lower is better)
Translates to: SFVIKKSSSSFRLWYLSSHSSRK*LPKTKL
Trigger: CAACTTGGTCTTCGGCAGGCATTTCCTGGAGGAGTG...ACTGGATAAGTACCACAGTCTAAATGAGGAGCTTGATTTCTTGATCACAAAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442019.6
3UTR-3UTR GCA 90 bp GGAATTCCTCCTGTAAAGACAAGAACTCTTGTTCTTGGGCCTCTTTTTCCCGTTTGGATTCGCACTTCCTaGTTTCTGTTAGTATGTTTT +
Preference number: 2 (lower is better)
Translates to: GIPPVKTRTLVLGPLFPVWIRTS*FLLVCF
Trigger: AAAACATACTAACAGAAAGCAGGAAGTGCGAATCCA...AACGGGAAAAAGAGGCCCAAGAACAAGAGTTCTTGTCTTTACAGGAGGAATTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000442019.6
3UTR CAA 90 bp CTCTTCAGTTTTTGCAGCATTATATCACTAACCTTCTCACTCTCTTaGAAATGTTCAGCATCAGAATTGATGATGTCCTGGCATGTGAGA +
Preference number: 2 (lower is better)
Translates to: LFSFCSIISLTFSLS*KCSASELMMSWHVR
Trigger: TCTCACATGCCAGGACATCATCAATTCTGATGCTGAACATTTCAAAGAGAGTGAGAAGGTTAGTGATATAATGCTGCAAAAACTGAAGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000442019.6
3UTR-3UTR TCA 90 bp TTTGTGATCAAGAAATCAAGCTCCTCATTTAGACTGTGGTACTTATCCAGTTTGAAAGCCATGTCCTCTTaGACAGGTTGTAAGCTTTCA +
Preference number: 2 (lower is better)
Translates to: FVIKKSSSSFRLWYLSSLKAMSS*TGCKLS
Trigger: TGAAAGCTTACAACCTGTTCAAGAGGACATGGCTTT...CAAACTGGATAAGTACCACAGTCTAAATGAGGAGCTTGATTTCTTGATCACAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442019.6
3UTR-3UTR TCA 90 bp TTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGGTTGACAAAAATTCATTCCTGGATTCCTaGAGATGTTTTTGCGTGTTA +
Preference number: 2 (lower is better)
Translates to: LIWLAYVVMTLPGVVDKNSFLDS*RCFCVL
Trigger: TAACACGCAAAAACATCTTCAGGAATCCAGGAATGA...ATTTTTGTCAACCACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000442019.6
3UTR-3UTR GCA 90 bp TTTGTGATCAAGAAATCAAGCTCCTCATTTAGACTGTGGTACTTATCCAGTTTGAGGCTCTTCAGTTTTTaGAGCATTATATCACTAACC +
Preference number: 2 (lower is better)
Translates to: FVIKKSSSSFRLWYLSSLRLFSF*SIISLT
Trigger: GGTTAGTGATATAATGCTGCAAAAACTGAAGAGCCT...CAAACTGGATAAGTACCACAGTCTAAATGAGGAGCTTGATTTCTTGATCACAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000442019.6
3UTR-3UTR CCA 90 bp TTTGTGATCAAGAAATCAAGCTCCTCATTTAGACTGTGGTACTTATCCAGTTTGCTGCATGGATTGATTTaGCTAGCATATGTAGTAATG +
Preference number: 2 (lower is better)
Translates to: FVIKKSSSSFRLWYLSSLLHGLI*LAYVVM
Trigger: CATTACTACATATGCTAGCCAAATCAATCCATGCAG...CAAACTGGATAAGTACCACAGTCTAAATGAGGAGCTTGATTTCTTGATCACAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442019.6
ENST00000458291.6
3UTR GCA 72 bp TTGCTCCCAGTCAGGCATCTCACAGTTCTCCCGACATaGTTCACTCCTCCAGGAAATGCCTGCCGAAGACCA +
Preference number: 3 (lower is better)
Translates to: LLPVRHLTVLPT*FTPPGNACRRP
Trigger: TGGTCTTCGGCAGGCATTTCCTGGAGGAGTGAAGCATGTCGGGAGAACTGTGAGATGCCTGACTGGGAGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442019.6
3UTR TCA 72 bp TTCACTCCTCCAGGAAATGCCTGCCGAAGACCAAGTTaGGACAATTTCTGGCCTCTCCACACCCTCTGCTGT +
Preference number: 3 (lower is better)
Translates to: FTPPGNACRRPS*DNFWPLHTLCC
Trigger: ACAGCAGAGGGTGTGGAGAGGCCAGAAATTGTCTCAACTTGGTCTTCGGCAGGCATTTCCTGGAGGAGTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442019.6
3UTR GCA 72 bp CACAGTTCTCCCGACATGCTTCACTCCTCCAGGAAATaGCTGCCGAAGACCAAGTTGAGACAATTTCTGGCC +
Preference number: 3 (lower is better)
Translates to: HSSPDMLHSSRK*LPKTKLRQFLA
Trigger: GGCCAGAAATTGTCTCAACTTGGTCTTCGGCAGGCATTTCCTGGAGGAGTGAAGCATGTCGGGAGAACTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442019.6
3UTR CCA 72 bp GAAGTCCCACCATCAGAGCCAGAAGACTGTGCATTTTaGAGGCCAGCTGAGAAGCTCTTTTTATATCTGCAG +
Preference number: 3 (lower is better)
Translates to: EVPPSEPEDCAF*RPAEKLFLYLQ
Trigger: CTGCAGATATAAAAAGAGCTTCTCAGCTGGCCTCCAAAATGCACAGTCTTCTGGCTCTGATGGTGGGACTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000442019.6
3UTR-3UTR CAA 90 bp CATCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGCTGCCGAAGACCAAGTaGAGACAATTTCTGGCCTCT +
Preference number: 3 (lower is better)
Translates to: HLHGLIWLAYVVMTLPGVLPKTK*RQFLAS
Trigger: AGAGGCCAGAAATTGTCTCAACTTGGTCTTCGGCAG...CACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442019.6
3UTR-3UTR CAA 90 bp GGAATTCCTCCTGTAAAGACAAGAACTCTTGTTCTTGGGCCTCTTTTTCCCGTTACTACACTGGAGTTCTaGGATTCGCACTTCCTGCTT +
Preference number: 3 (lower is better)
Translates to: GIPPVKTRTLVLGPLFPVTTLEF*DSHFLL
Trigger: AAGCAGGAAGTGCGAATCCAAGAACTCCAGTGTAGT...AACGGGAAAAAGAGGCCCAAGAACAAGAGTTCTTGTCTTTACAGGAGGAATTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000442019.6
3UTR TCA 72 bp TTTTATATCTGCAGGATTCAGCCTCTCTTCACAAGGTaGGCAATCCGGGAGCAGATTAGAATGTGTCGTTTT +
Preference number: 3 (lower is better)
Translates to: FYICRIQPLFTR*AIREQIRMCRF
Trigger: AAAACGACACATTCTAATCTGCTCCCGGATTGCTCACCTTGTGAAGAGAGGCTGAATCCTGCAGATATAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442019.6
3UTR GCA 72 bp TCTCTCTTCCAAATGTGCAATCTGGGAGTGGGATATTaGAAGCCTTTGGTCAGCACATTCAATGATTTCTTC +
Preference number: 3 (lower is better)
Translates to: SLFQMCNLGVGY*KPLVSTFNDFF
Trigger: GAAGAAATCATTGAATGTGCTGACCAAAGGCTTGCAATATCCCACTCCCAGATTGCACATTTGGAAGAGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442019.6
ENST00000458291.6
3UTR CCA 72 bp TGGAATTCCTCCTGTAAAGACAAGAACTCTTGTTCTTaGGCCTCTTTTTCCCGTTTCAACAAGTCCAAAGCA +
Preference number: 3 (lower is better)
Translates to: WNSSCKDKNSCS*ASFSRFNKSKA
Trigger: TGCTTTGGACTTGTTGAAACGGGAAAAAGAGGCCCAAGAACAAGAGTTCTTGTCTTTACAGGAGGAATTCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000442019.6
3UTR CCA 72 bp TGTTTATTTCTCTCTTCCAAATGTGCAATCTGGGAGTaGGATATTGCAAGCCTTTGGTCAGCACATTCAATG +
Preference number: 3 (lower is better)
Translates to: CLFLSSKCAIWE*DIASLWSAHSM
Trigger: CATTGAATGTGCTGACCAAAGGCTTGCAATATCCCACTCCCAGATTGCACATTTGGAAGAGAGAAATAAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442019.6
ENST00000458291.6
3UTR-3UTR CAA 90 bp TCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGGTCTCTTCCTGGAGTGGTaGACAAAAATGATTACTGTT +
Preference number: 3 (lower is better)
Translates to: SAWIDLASICSNDSSWSGLFLEW*TKMITV
Trigger: AACAGTAATCATTTTTGTCAACCACTCCAGGAAGAG...ACCACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
3UTR-3UTR CAA 90 bp CATCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGCTCTTCCTGGAGTGGTaGACAAAAATGATTACTGTT +
Preference number: 3 (lower is better)
Translates to: HLHGLIWLAYVVMTLPGVLFLEW*TKMITV
Trigger: AACAGTAATCATTTTTGTCAACCACTCCAGGAAGAG...CACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
3UTR-3UTR CAA 90 bp GGAATTCCTCCTGTAAAGACAAGAACTCTTGTTCTTGGGCCTCTTTTTCCCGTTTCTGCATGGATTGATTaGGCTAGCATATGTAGTAAT +
Preference number: 3 (lower is better)
Translates to: GIPPVKTRTLVLGPLFPVSAWID*ASICSN
Trigger: ATTACTACATATGCTAGCCAAATCAATCCATGCAGA...AACGGGAAAAAGAGGCCCAAGAACAAGAGTTCTTGTCTTTACAGGAGGAATTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000442019.6
3UTR-3UTR CAA 90 bp CATCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGTCTGCATGGATTGATTaGGCTAGCATATGTAGTAAT +
Preference number: 3 (lower is better)
Translates to: HLHGLIWLAYVVMTLPGVSAWID*ASICSN
Trigger: ATTACTACATATGCTAGCCAAATCAATCCATGCAGA...CACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
3UTR-3UTR CAA 90 bp CATCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGTATCATCTGCATGGATaGATTTGGCTAGCATATGTA +
Preference number: 3 (lower is better)
Translates to: HLHGLIWLAYVVMTLPGVYHLHG*IWLAYV
Trigger: TACATATGCTAGCCAAATCAATCCATGCAGATGATA...CACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
3UTR CCA 72 bp TCTTTAACCCTCTTCTCTAAATACAGGTTACTACACTaGAGTTCTTGGATTCGCACTTCCTGCTTTCTGTTA +
Preference number: 3 (lower is better)
Translates to: SLTLFSKYRLLH*SSWIRTSCFLL
Trigger: TAACAGAAAGCAGGAAGTGCGAATCCAAGAACTCCAGTGTAGTAACCTGTATTTAGAGAAGAGGGTTAAAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442019.6
3UTR-3UTR CAA 90 bp TTTGTGATCAAGAAATCAAGCTCCTCATTTAGACTGTGGTACTTATCCAGTTTGACATCTCTGATACTCTaGGCTTCATCTGAATCACAG +
Preference number: 3 (lower is better)
Translates to: FVIKKSSSSFRLWYLSSLTSLIL*ASSESQ
Trigger: CTGTGATTCAGATGAAGCCAAGAGTATCAGAGATGT...CAAACTGGATAAGTACCACAGTCTAAATGAGGAGCTTGATTTCTTGATCACAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442019.6
ENST00000458291.6
3UTR CCA 72 bp CTCTTCTCTAAATACAGGTTACTACACTGGAGTTCTTaGATTCGCACTTCCTGCTTTCTGTTAGTATGTTTT +
Preference number: 3 (lower is better)
Translates to: LFSKYRLLHWSS*IRTSCFLLVCF
Trigger: AAAACATACTAACAGAAAGCAGGAAGTGCGAATCCAAGAACTCCAGTGTAGTAACCTGTATTTAGAGAAGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442019.6
3UTR-3UTR CAA 90 bp TTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGGTTGACAAAAATTCTGCATGGATTGATTaGGCTAGCATATGTAGTAAT +
Preference number: 3 (lower is better)
Translates to: LIWLAYVVMTLPGVVDKNSAWID*ASICSN
Trigger: ATTACTACATATGCTAGCCAAATCAATCCATGCAGA...ATTTTTGTCAACCACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
3UTR-3UTR CAA 90 bp TTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGGTTGACAAAAATTATCATCTGCATGGATaGATTTGGCTAGCATATGTA +
Preference number: 3 (lower is better)
Translates to: LIWLAYVVMTLPGVVDKNYHLHG*IWLAYV
Trigger: TACATATGCTAGCCAAATCAATCCATGCAGATGATA...ATTTTTGTCAACCACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
3UTR GCA 72 bp TTCTCCTTTAGCTTATTGATGACATCAATGAACACTTaGTGTTTGGTAATCTTCATCTGTAGTTCTTTAACC +
Preference number: 3 (lower is better)
Translates to: FSFSLLMTSMNT*CLVIFICSSLT
Trigger: GGTTAAAGAACTACAGATGAAGATTACCAAACAGCAAGTGTTCATTGATGTCATCAATAAGCTAAAGGAGAA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442019.6
3UTR CCA 72 bp ATACAGATTTTAATATATCATCTGCATGGATTGATTTaGCTAGCATATGTAGTAATGACTCTTCCTGGAGTG +
Preference number: 3 (lower is better)
Translates to: IQILIYHLHGLI*LAYVVMTLPGV
Trigger: CACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGATGATATATTAAAATCTGTAT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR TCA 90 bp CATCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGTGGAACGCCCCTGTGTaGCGTCCGCCCGCGCCGGGG +
Preference number: 4 (lower is better)
Translates to: HLHGLIWLAYVVMTLPGVWNAPV*RPPAPG
Trigger: CCCCGGCGCGGGCGGACGTCACACAGGGGCGTTCCA...CACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296742.11
ENST00000502583.6
CDS-3UTR GCA 90 bp CATCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGCTCCGCAGAGACAGGTaGAGCCCGCGAGGCCCGAGC +
Preference number: 4 (lower is better)
Translates to: HLHGLIWLAYVVMTLPGVLRRDR*SPRGPS
Trigger: GCTCGGGCCTCGCGGGCTGCACCTGTCTCTGCGGAG...CACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296742.11
ENST00000502583.6
3UTR CAA 72 bp CTTCACTCCTCCAGGAAATGCCTGCCGAAGACCAAGTaGAGACAATTTCTGGCCTCTCCACACCCTCTGCTG +
Preference number: 4 (lower is better)
Translates to: LHSSRKCLPKTK*RQFLASPHPLL
Trigger: CAGCAGAGGGTGTGGAGAGGCCAGAAATTGTCTCAACTTGGTCTTCGGCAGGCATTTCCTGGAGGAGTGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442019.6
CDS-3UTR GCA 90 bp TCATCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGCACGGGCCTCGCCGTaGCGGCTACTCAACACGCCT +
Preference number: 4 (lower is better)
Translates to: SSAWIDLASICSNDSSWSARASP*RLLNTP
Trigger: AGGCGTGTTGAGTAGCCGGCACGGCGAGGCCCGTGC...ACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296742.11
ENST00000502583.6
CDS-3UTR CCA 90 bp TCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGGTAGGCCGAACAGCCTGTaGGCTAGCTGGCGCCTCCTG +
Preference number: 4 (lower is better)
Translates to: SAWIDLASICSNDSSWSGRPNSL*ASWRLL
Trigger: CAGGAGGCGCCAGCTAGCCCACAGGCTGTTCGGCCT...ACCACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296742.11
ENST00000502583.6
CDS-3UTR CCA 90 bp CATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGGTTGACCCCACGCTACGGACCTaGCTCTCCCTCCCTCTGCAC +
Preference number: 4 (lower is better)
Translates to: HGLIWLAYVVMTLPGVVDPTLRT*LSLPLH
Trigger: GTGCAGAGGGAGGGAGAGCCAGGTCCGTAGCGTGGG...GTCAACCACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR CCA 90 bp TCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGGTCCCACGCTACGGACCTaGCTCTCCCTCCCTCTGCAC +
Preference number: 4 (lower is better)
Translates to: SAWIDLASICSNDSSWSGPTLRT*LSLPLH
Trigger: GTGCAGAGGGAGGGAGAGCCAGGTCCGTAGCGTGGG...ACCACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR GCA 90 bp TTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGGTTGACAAAAATCTCCGCAGAGACAGGTaGAGCCCGCGAGGCCCGAGC +
Preference number: 4 (lower is better)
Translates to: LIWLAYVVMTLPGVVDKNLRRDR*SPRGPS
Trigger: GCTCGGGCCTCGCGGGCTGCACCTGTCTCTGCGGAG...ATTTTTGTCAACCACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296742.11
ENST00000502583.6
CDS-3UTR CCA 90 bp TCATCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTAGGCCGAACAGCCTGTaGGCTAGCTGGCGCCTCCTG +
Preference number: 4 (lower is better)
Translates to: SSAWIDLASICSNDSSWSRPNSL*ASWRLL
Trigger: CAGGAGGCGCCAGCTAGCCCACAGGCTGTTCGGCCT...ACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296742.11
ENST00000502583.6
CDS-3UTR CCA 90 bp TCATCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTCCCACGCTACGGACCTaGCTCTCCCTCCCTCTGCAC +
Preference number: 4 (lower is better)
Translates to: SSAWIDLASICSNDSSWSPTLRT*LSLPLH
Trigger: GTGCAGAGGGAGGGAGAGCCAGGTCCGTAGCGTGGG...ACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR CCA 90 bp AGCATCAGAATTGATGATGTCCTGGCATGTGAGAAGTCCCACCATCAGAGCCAGGGATCCATAGTTTCTTaGACCCACGCTACGGACCTG +
Preference number: 4 (lower is better)
Translates to: SIRIDDVLACEKSHHQSQGSIVS*THATDL
Trigger: CAGGTCCGTAGCGTGGGTCCAAGAAACTATGGATCC...CTGGCTCTGATGGTGGGACTTCTCACATGCCAGGACATCATCAATTCTGATGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442019.6
CDS-3UTR GCA 90 bp TCATCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGGCTCTCCCTCCCTCTaGACCGGGTTTTGTGGGAGG +
Preference number: 4 (lower is better)
Translates to: SSAWIDLASICSNDSSWSGSPSL*TGFCGR
Trigger: CCTCCCACAAAACCCGGTGCAGAGGGAGGGAGAGCC...ACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR GCA 90 bp GTGGTACTTATCCAGTTTGGCTCCCAGAAGGGTAGGTACATCTCTGATACTCTTTCAGCATCTCTCCACTaGAGTGGATTAGAGGCGGGC +
Preference number: 4 (lower is better)
Translates to: VVLIQFGSQKGRYISDTLSASLH*SGLEAG
Trigger: GCCCGCCTCTAATCCACTGCAGTGGAGAGATGCTGA...AAGAGTATCAGAGATGTACCTACCCTTCTGGGAGCCAAACTGGATAAGTACCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442019.6
ENST00000458291.6
CDS-3UTR CCA 90 bp TCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGGTCGAGCGACCCTACTGTaGGTGCGGTGTCTTCCCAGA +
Preference number: 4 (lower is better)
Translates to: SAWIDLASICSNDSSWSGRATLL*VRCLPR
Trigger: TCTGGGAAGACACCGCACCCACAGTAGGGTCGCTCG...ACCACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296742.11
ENST00000502583.6
CDS-3UTR CCA 90 bp ATCCAGTTTGGCTCCCAGAAGGGTAGGTACATCTCTGATACTCTTGGCTTCATCGAGGCAAGTCACAAGTaGTGCCGGTGGTTTCCATAC +
Preference number: 4 (lower is better)
Translates to: IQFGSQKGRYISDTLGFIEASHK*CRWFPY
Trigger: GTATGGAAACCACCGGCACCACTTGTGACTTGCCTC...GATGAAGCCAAGAGTATCAGAGATGTACCTACCCTTCTGGGAGCCAAACTGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442019.6
ENST00000458291.6
CDS-3UTR GCA 90 bp ATATATCATCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGCACGGGCCTCGCCGTaGCGGCTACTCAACACGCCT +
Preference number: 4 (lower is better)
Translates to: IYHLHGLIWLAYVVMTLPARASP*RLLNTP
Trigger: AGGCGTGTTGAGTAGCCGGCACGGCGAGGCCCGTGC...AGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGATGATATAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296742.11
ENST00000502583.6
CDS-3UTR GCA 90 bp AAATCAAGCTCCTCATTTAGACTGTGGTACTTATCCAGTTTGGCTCCCAGAAGGTCAGCATCTCTCCACTaGAGTGGATTAGAGGCGGGC +
Preference number: 4 (lower is better)
Translates to: KSSSSFRLWYLSSLAPRRSASLH*SGLEAG
Trigger: GCCCGCCTCTAATCCACTGCAGTGGAGAGATGCTGA...CCTTCTGGGAGCCAAACTGGATAAGTACCACAGTCTAAATGAGGAGCTTGATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442019.6
ENST00000458291.6
CDS-3UTR CCA 90 bp TTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGGTTGACAAAAATCCCACGCTACGGACCTaGCTCTCCCTCCCTCTGCAC +
Preference number: 4 (lower is better)
Translates to: LIWLAYVVMTLPGVVDKNPTLRT*LSLPLH
Trigger: GTGCAGAGGGAGGGAGAGCCAGGTCCGTAGCGTGGG...ATTTTTGTCAACCACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR CCA 90 bp CTTATCCAGTTTGGCTCCCAGAAGGGTAGGTACATCTCTGATACTCTTGGCTTCATCTCTCCACTGCAGTaGATTAGAGGCGGGCTTCTA +
Preference number: 4 (lower is better)
Translates to: LIQFGSQKGRYISDTLGFISPLQ*IRGGLL
Trigger: TAGAAGCCCGCCTCTAATCCACTGCAGTGGAGAGAT...GAAGCCAAGAGTATCAGAGATGTACCTACCCTTCTGGGAGCCAAACTGGATAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442019.6
ENST00000458291.6
CDS-3UTR GCA 90 bp TTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGGTTGACAAAAATGGCTCTCCCTCCCTCTaGACCGGGTTTTGTGGGAGG +
Preference number: 4 (lower is better)
Translates to: LIWLAYVVMTLPGVVDKNGSPSL*TGFCGR
Trigger: CCTCCCACAAAACCCGGTGCAGAGGGAGGGAGAGCC...ATTTTTGTCAACCACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR GCA 90 bp CATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGGTTGACTCAGCATCTCTCCACTaGAGTGGATTAGAGGCGGGC +
Preference number: 4 (lower is better)
Translates to: HGLIWLAYVVMTLPGVVDSASLH*SGLEAG
Trigger: GCCCGCCTCTAATCCACTGCAGTGGAGAGATGCTGA...GTCAACCACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR GCA 90 bp TCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGGTTCAGCATCTCTCCACTaGAGTGGATTAGAGGCGGGC +
Preference number: 4 (lower is better)
Translates to: SAWIDLASICSNDSSWSGSASLH*SGLEAG
Trigger: GCCCGCCTCTAATCCACTGCAGTGGAGAGATGCTGA...ACCACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR GCA 90 bp GGAATTCCTCCTGTAAAGACAAGAACTCTTGTTCTTGGGCCTCTTTTTCCCGTTCACTCCTCCAGGAAATaGCTGCCGAAGACCAAGTTG +
Preference number: 4 (lower is better)
Translates to: GIPPVKTRTLVLGPLFPVHSSRK*LPKTKL
Trigger: CAACTTGGTCTTCGGCAGGCATTTCCTGGAGGAGTG...AACGGGAAAAAGAGGCCCAAGAACAAGAGTTCTTGTCTTTACAGGAGGAATTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000442019.6
CDS-3UTR GCA 90 bp ATCAGAATTGATGATGTCCTGGCATGTGAGAAGTCCCACCATCAGAGCCAGAAGACAGTTCTCCCGACATaGTTCACTCCTCCAGGAAAT +
Preference number: 4 (lower is better)
Translates to: IRIDDVLACEKSHHQSQKTVLPT*FTPPGN
Trigger: ATTTCCTGGAGGAGTGAAGCATGTCGGGAGAACTGT...CTTCTGGCTCTGATGGTGGGACTTCTCACATGCCAGGACATCATCAATTCTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442019.6
CDS-3UTR GCA 90 bp GTGGTACTTATCCAGTTTGGCTCCCAGAAGGGTAGGTACATCTCTGATACTCTTGCAAGTCACAAGTGGTaGCGGTGGTTTCCATACAGA +
Preference number: 4 (lower is better)
Translates to: VVLIQFGSQKGRYISDTLASHKW*RWFPYR
Trigger: TCTGTATGGAAACCACCGGCACCACTTGTGACTTGC...AAGAGTATCAGAGATGTACCTACCCTTCTGGGAGCCAAACTGGATAAGTACCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442019.6
ENST00000458291.6
CDS-3UTR CCA 90 bp TCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGGTCTGCACCGGGTTTTGTaGGAGGGAGAACGCTTTCCA +
Preference number: 4 (lower is better)
Translates to: SAWIDLASICSNDSSWSGLHRVL*EGERFP
Trigger: TGGAAAGCGTTCTCCCTCCCACAAAACCCGGTGCAG...ACCACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR CCA 90 bp CATCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGCTGCACCGGGTTTTGTaGGAGGGAGAACGCTTTCCA +
Preference number: 4 (lower is better)
Translates to: HLHGLIWLAYVVMTLPGVLHRVL*EGERFP
Trigger: TGGAAAGCGTTCTCCCTCCCACAAAACCCGGTGCAG...CACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR CCA 90 bp ATATATCATCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTCCCACGCTACGGACCTaGCTCTCCCTCCCTCTGCAC +
Preference number: 4 (lower is better)
Translates to: IYHLHGLIWLAYVVMTLPPTLRT*LSLPLH
Trigger: GTGCAGAGGGAGGGAGAGCCAGGTCCGTAGCGTGGG...AGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGATGATATAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR CCA 90 bp AGCATCAGAATTGATGATGTCCTGGCATGTGAGAAGTCCCACCATCAGAGCCAGTCCAAATGTGCAATCTaGGAGTGGGATATTGCAAGC +
Preference number: 4 (lower is better)
Translates to: SIRIDDVLACEKSHHQSQSKCAI*EWDIAS
Trigger: GCTTGCAATATCCCACTCCCAGATTGCACATTTGGA...CTGGCTCTGATGGTGGGACTTCTCACATGCCAGGACATCATCAATTCTGATGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442019.6
CDS-3UTR TCA 90 bp ATCCAGTTTGGCTCCCAGAAGGGTAGGTACATCTCTGATACTCTTGGCTTCATCCTTTTCATAACTGACTaGCATCTCAGGAATCTCCCC +
Preference number: 4 (lower is better)
Translates to: IQFGSQKGRYISDTLGFILFITD*HLRNLP
Trigger: GGGGAGATTCCTGAGATGTCAGTCAGTTATGAAAAG...GATGAAGCCAAGAGTATCAGAGATGTACCTACCCTTCTGGGAGCCAAACTGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442019.6
ENST00000458291.6
CDS-3UTR TCA 90 bp TCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGGTCCTCTCTTCACAAGGTaGGCAATCCGGGAGCAGATT +
Preference number: 4 (lower is better)
Translates to: SAWIDLASICSNDSSWSGPLFTR*AIREQI
Trigger: AATCTGCTCCCGGATTGCTCACCTTGTGAAGAGAGG...ACCACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR TCA 90 bp AGCATCAGAATTGATGATGTCCTGGCATGTGAGAAGTCCCACCATCAGAGCCAGACTCTTGGCTTCATCTaGATCACAGTCTATGACCTT +
Preference number: 4 (lower is better)
Translates to: SIRIDDVLACEKSHHQSQTLGFI*ITVYDL
Trigger: AAGGTCATAGACTGTGATTCAGATGAAGCCAAGAGT...CTGGCTCTGATGGTGGGACTTCTCACATGCCAGGACATCATCAATTCTGATGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442019.6
CDS-3UTR TCA 90 bp ATCCAGTTTGGCTCCCAGAAGGGTAGGTACATCTCTGATACTCTTGGCTTCATCACTCTTGGCTTCATCTaGATCACAGTCTATGACCTG +
Preference number: 4 (lower is better)
Translates to: IQFGSQKGRYISDTLGFITLGFI*ITVYDL
Trigger: CAGGTCATAGACTGTGATTCAGATGAAGCCAAGAGT...GATGAAGCCAAGAGTATCAGAGATGTACCTACCCTTCTGGGAGCCAAACTGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458291.6
CDS-3UTR GCA 90 bp TCATCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTCTAGCTGGCGCCTCCTaGCGCAGTAAACACAAAGTG +
Preference number: 4 (lower is better)
Translates to: SSAWIDLASICSNDSSWSLAGAS*RSKHKV
Trigger: CACTTTGTGTTTACTGCGGCAGGAGGCGCCAGCTAG...ACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296742.11
ENST00000502583.6
CDS-3UTR GCA 90 bp ATATATCATCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGCTCTCCCTCCCTCTaGACCGGGTTTTGTGGGAGG +
Preference number: 4 (lower is better)
Translates to: IYHLHGLIWLAYVVMTLPGSPSL*TGFCGR
Trigger: CCTCCCACAAAACCCGGTGCAGAGGGAGGGAGAGCC...AGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGATGATATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR GCA 90 bp TCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGGTCACTCCTCCAGGAAATaGCTGCCGAAGACCAAGTTG +
Preference number: 4 (lower is better)
Translates to: SAWIDLASICSNDSSWSGHSSRK*LPKTKL
Trigger: CAACTTGGTCTTCGGCAGGCATTTCCTGGAGGAGTG...ACCACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR GCA 90 bp CATCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGCACTCCTCCAGGAAATaGCTGCCGAAGACCAAGTTG +
Preference number: 4 (lower is better)
Translates to: HLHGLIWLAYVVMTLPGVHSSRK*LPKTKL
Trigger: CAACTTGGTCTTCGGCAGGCATTTCCTGGAGGAGTG...CACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR GCA 90 bp GGAATTCCTCCTGTAAAGACAAGAACTCTTGTTCTTGGGCCTCTTTTTCCCGTTCTGGGAGTGGGATATTaGAAGCCTTTGGTCAGCACA +
Preference number: 4 (lower is better)
Translates to: GIPPVKTRTLVLGPLFPVLGVGY*KPLVST
Trigger: TGTGCTGACCAAAGGCTTGCAATATCCCACTCCCAG...AACGGGAAAAAGAGGCCCAAGAACAAGAGTTCTTGTCTTTACAGGAGGAATTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000442019.6
CDS-3UTR GCA 90 bp GGAATTCCTCCTGTAAAGACAAGAACTCTTGTTCTTGGGCCTCTTTTTCCCGTTGCAAGTCACAAGTGGTaGCGGTGGTTTCCATACAGA +
Preference number: 4 (lower is better)
Translates to: GIPPVKTRTLVLGPLFPVASHKW*RWFPYR
Trigger: TCTGTATGGAAACCACCGGCACCACTTGTGACTTGC...AACGGGAAAAAGAGGCCCAAGAACAAGAGTTCTTGTCTTTACAGGAGGAATTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000442019.6
CDS-3UTR CCA 90 bp TCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGGTGGATCCATAGTTTCTTaGACCCACGCTACGGACCTG +
Preference number: 4 (lower is better)
Translates to: SAWIDLASICSNDSSWSGGSIVS*THATDL
Trigger: CAGGTCCGTAGCGTGGGTCCAAGAAACTATGGATCC...ACCACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR CCA 90 bp CTTATCCAGTTTGGCTCCCAGAAGGGTAGGTACATCTCTGATACTCTTGGCTTCAAAGAGCTGGCATCATaGTCATGGACTTCGGATGAT +
Preference number: 4 (lower is better)
Translates to: LIQFGSQKGRYISDTLGFKELAS*SWTSDD
Trigger: ATCATCCGAAGTCCATGACCATGATGCCAGCTCTTT...GAAGCCAAGAGTATCAGAGATGTACCTACCCTTCTGGGAGCCAAACTGGATAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442019.6
ENST00000458291.6
CDS-3UTR CCA 90 bp CAGGTTACTACACTGGAGTTCTTGGATTCGCACTTCCTGCTTTCTGTTAGTATGCACAAGTGGTGCCGGTaGTTTCCATACAGATTGGAG +
Preference number: 4 (lower is better)
Translates to: QVTTLEFLDSHFLLSVSMHKWCR*FPYRLE
Trigger: CTCCAATCTGTATGGAAACCACCGGCACCACTTGTG...CATACTAACAGAAAGCAGGAAGTGCGAATCCAAGAACTCCAGTGTAGTAACCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442019.6
CDS-3UTR CCA 90 bp CATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGGTTGACGAGGCAAGTCACAAGTaGTGCCGGTGGTTTCCATAC +
Preference number: 4 (lower is better)
Translates to: HGLIWLAYVVMTLPGVVDEASHK*CRWFPY
Trigger: GTATGGAAACCACCGGCACCACTTGTGACTTGCCTC...GTCAACCACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR TCA 90 bp TCATCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTCCTCTCTTCACAAGGTaGGCAATCCGGGAGCAGATT +
Preference number: 4 (lower is better)
Translates to: SSAWIDLASICSNDSSWSPLFTR*AIREQI
Trigger: AATCTGCTCCCGGATTGCTCACCTTGTGAAGAGAGG...ACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR GCA 90 bp AAATCAAGCTCCTCATTTAGACTGTGGTACTTATCCAGTTTGGCTCCCAGAAGGCCTCTCCACACCCTCTaGTGTGACTTCCTTTTCATA +
Preference number: 4 (lower is better)
Translates to: KSSSSFRLWYLSSLAPRRPLHTL*CDFLFI
Trigger: TATGAAAAGGAAGTCACAGCAGAGGGTGTGGAGAGG...CCTTCTGGGAGCCAAACTGGATAAGTACCACAGTCTAAATGAGGAGCTTGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442019.6
ENST00000458291.6
CDS-3UTR GCA 90 bp TCATCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTCACTCCTCCAGGAAATaGCTGCCGAAGACCAAGTTG +
Preference number: 4 (lower is better)
Translates to: SSAWIDLASICSNDSSWSHSSRK*LPKTKL
Trigger: CAACTTGGTCTTCGGCAGGCATTTCCTGGAGGAGTG...ACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR GCA 90 bp CATCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGCTGGGAGTGGGATATTaGAAGCCTTTGGTCAGCACA +
Preference number: 4 (lower is better)
Translates to: HLHGLIWLAYVVMTLPGVLGVGY*KPLVST
Trigger: TGTGCTGACCAAAGGCTTGCAATATCCCACTCCCAG...CACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR GCA 90 bp TCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGGTGCAAGTCACAAGTGGTaGCGGTGGTTTCCATACAGA +
Preference number: 4 (lower is better)
Translates to: SAWIDLASICSNDSSWSGASHKW*RWFPYR
Trigger: TCTGTATGGAAACCACCGGCACCACTTGTGACTTGC...ACCACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR CCA 90 bp CATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGGTTGACATCTCTCCACTGCAGTaGATTAGAGGCGGGCTTCTA +
Preference number: 4 (lower is better)
Translates to: HGLIWLAYVVMTLPGVVDISPLQ*IRGGLL
Trigger: TAGAAGCCCGCCTCTAATCCACTGCAGTGGAGAGAT...GTCAACCACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR CCA 90 bp CATCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGATCTCTCCACTGCAGTaGATTAGAGGCGGGCTTCTA +
Preference number: 4 (lower is better)
Translates to: HLHGLIWLAYVVMTLPGVISPLQ*IRGGLL
Trigger: TAGAAGCCCGCCTCTAATCCACTGCAGTGGAGAGAT...CACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR CCA 90 bp GTGGTACTTATCCAGTTTGGCTCCCAGAAGGGTAGGTACATCTCTGATACTCTTCTACACTGGAGTTCTTaGATTCGCACTTCCTGCTTT +
Preference number: 4 (lower is better)
Translates to: VVLIQFGSQKGRYISDTLLHWSS*IRTSCF
Trigger: AAAGCAGGAAGTGCGAATCCAAGAACTCCAGTGTAG...AAGAGTATCAGAGATGTACCTACCCTTCTGGGAGCCAAACTGGATAAGTACCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442019.6
ENST00000458291.6
CDS-3UTR CCA 90 bp CTTATCCAGTTTGGCTCCCAGAAGGGTAGGTACATCTCTGATACTCTTGGCTTCTACAGGTTACTACACTaGAGTTCTTGGATTCGCACT +
Preference number: 4 (lower is better)
Translates to: LIQFGSQKGRYISDTLGFYRLLH*SSWIRT
Trigger: AGTGCGAATCCAAGAACTCCAGTGTAGTAACCTGTA...GAAGCCAAGAGTATCAGAGATGTACCTACCCTTCTGGGAGCCAAACTGGATAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442019.6
ENST00000458291.6
CDS-3UTR CCA 90 bp ATCCAGTTTGGCTCCCAGAAGGGTAGGTACATCTCTGATACTCTTGGCTTCATCAAGAACTCTTGTTCTTaGGCCTCTTTTTCCCGTTTC +
Preference number: 4 (lower is better)
Translates to: IQFGSQKGRYISDTLGFIKNSCS*ASFSRF
Trigger: GAAACGGGAAAAAGAGGCCCAAGAACAAGAGTTCTT...GATGAAGCCAAGAGTATCAGAGATGTACCTACCCTTCTGGGAGCCAAACTGGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000442019.6
ENST00000458291.6
CDS-3UTR CCA 90 bp CATCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGCACAAGTGGTGCCGGTaGTTTCCATACAGATTGGAG +
Preference number: 4 (lower is better)
Translates to: HLHGLIWLAYVVMTLPGVHKWCR*FPYRLE
Trigger: CTCCAATCTGTATGGAAACCACCGGCACCACTTGTG...CACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR CCA 90 bp TCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGGTCACAAGTGGTGCCGGTaGTTTCCATACAGATTGGAG +
Preference number: 4 (lower is better)
Translates to: SAWIDLASICSNDSSWSGHKWCR*FPYRLE
Trigger: CTCCAATCTGTATGGAAACCACCGGCACCACTTGTG...ACCACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR CCA 90 bp TCATCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGAGGCAAGTCACAAGTaGTGCCGGTGGTTTCCATAC +
Preference number: 4 (lower is better)
Translates to: SSAWIDLASICSNDSSWSEASHK*CRWFPY
Trigger: GTATGGAAACCACCGGCACCACTTGTGACTTGCCTC...ACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR TCA 90 bp AAATCAAGCTCCTCATTTAGACTGTGGTACTTATCCAGTTTGGCTCCCAGAAGGATGGTGTCAACTGGCTaGATTAGTGCATTCGTTGAG +
Preference number: 4 (lower is better)
Translates to: KSSSSFRLWYLSSLAPRRMVSTG*ISAFVE
Trigger: CTCAACGAATGCACTAATTCAGCCAGTTGACACCAT...CCTTCTGGGAGCCAAACTGGATAAGTACCACAGTCTAAATGAGGAGCTTGATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442019.6
ENST00000458291.6
CDS-3UTR TCA 90 bp ATCCAGTTTGGCTCCCAGAAGGGTAGGTACATCTCTGATACTCTTGGCTTCATCCTTCCTTTTCATAACTaGCTGACATCTCAGGAATCT +
Preference number: 4 (lower is better)
Translates to: IQFGSQKGRYISDTLGFILPFHN*LTSQES
Trigger: AGATTCCTGAGATGTCAGTCAGTTATGAAAAGGAAG...GATGAAGCCAAGAGTATCAGAGATGTACCTACCCTTCTGGGAGCCAAACTGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442019.6
ENST00000458291.6
CDS-3UTR TCA 90 bp ATCAGAATTGATGATGTCCTGGCATGTGAGAAGTCCCACCATCAGAGCCAGAAGATTTTGGAGGCCAGCTaGGAAGCTCTTTTTATATCT +
Preference number: 4 (lower is better)
Translates to: IRIDDVLACEKSHHQSQKILEAS*EALFIS
Trigger: AGATATAAAAAGAGCTTCTCAGCTGGCCTCCAAAAT...CTTCTGGCTCTGATGGTGGGACTTCTCACATGCCAGGACATCATCAATTCTGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000442019.6
CDS-3UTR TCA 90 bp CTTATCCAGTTTGGCTCCCAGAAGGGTAGGTACATCTCTGATACTCTTGGCTTCCATGGTATCCGATTCTaGCATGCTTTCTACTTTTTC +
Preference number: 4 (lower is better)
Translates to: LIQFGSQKGRYISDTLGFHGIRF*HAFYFF
Trigger: GAAAAAGTAGAAAGCATGTCAGAATCGGATACCATG...GAAGCCAAGAGTATCAGAGATGTACCTACCCTTCTGGGAGCCAAACTGGATAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000442019.6
ENST00000458291.6
CDS-3UTR TCA 90 bp AGCATCAGAATTGATGATGTCCTGGCATGTGAGAAGTCCCACCATCAGAGCCAGTGTCATTTTCTTCAATaGGTCTGTTGCAGTGGTTTT +
Preference number: 4 (lower is better)
Translates to: SIRIDDVLACEKSHHQSQCHFLQ*VCCSGF
Trigger: AAAACCACTGCAACAGACTCATTGAAGAAAATGACA...CTGGCTCTGATGGTGGGACTTCTCACATGCCAGGACATCATCAATTCTGATGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442019.6
CDS-3UTR GCA 90 bp AGCATCAGAATTGATGATGTCCTGGCATGTGAGAAGTCCCACCATCAGAGCCAGCTACCCAGTGAAATTTaGAAACGGTTTCAAATTGTC +
Preference number: 4 (lower is better)
Translates to: SIRIDDVLACEKSHHQSQLPSEI*KRFQIV
Trigger: GACAATTTGAAACCGTTTGCAAATTTCACTGGGTAG...CTGGCTCTGATGGTGGGACTTCTCACATGCCAGGACATCATCAATTCTGATGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442019.6
CDS-3UTR GCA 90 bp TCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGGTCCTCTCCACACCCTCTaGTGTGACTTCCTTTTCATA +
Preference number: 4 (lower is better)
Translates to: SAWIDLASICSNDSSWSGPLHTL*CDFLFI
Trigger: TATGAAAAGGAAGTCACAGCAGAGGGTGTGGAGAGG...ACCACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR GCA 90 bp CATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGGTTGACCCTCTCCACACCCTCTaGTGTGACTTCCTTTTCATA +
Preference number: 4 (lower is better)
Translates to: HGLIWLAYVVMTLPGVVDPLHTL*CDFLFI
Trigger: TATGAAAAGGAAGTCACAGCAGAGGGTGTGGAGAGG...GTCAACCACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR GCA 90 bp TCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGGTACAGTTCTCCCGACATaGTTCACTCCTCCAGGAAAT +
Preference number: 4 (lower is better)
Translates to: SAWIDLASICSNDSSWSGTVLPT*FTPPGN
Trigger: ATTTCCTGGAGGAGTGAAGCATGTCGGGAGAACTGT...ACCACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR GCA 90 bp CATCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGACAGTTCTCCCGACATaGTTCACTCCTCCAGGAAAT +
Preference number: 4 (lower is better)
Translates to: HLHGLIWLAYVVMTLPGVTVLPT*FTPPGN
Trigger: ATTTCCTGGAGGAGTGAAGCATGTCGGGAGAACTGT...CACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR GCA 90 bp CATCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGAAGCTTTCAGCACTTTaGTCCCAGTCAGGCATCTCA +
Preference number: 4 (lower is better)
Translates to: HLHGLIWLAYVVMTLPGVKLSAL*SQSGIS
Trigger: TGAGATGCCTGACTGGGAGCAAAGTGCTGAAAGCTT...CACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR GCA 90 bp ATCCAGTTTGGCTCCCAGAAGGGTAGGTACATCTCTGATACTCTTGGCTTCATCAGCTCTTTTTATATCTaGAGGATTCAGCCTCTCTTC +
Preference number: 4 (lower is better)
Translates to: IQFGSQKGRYISDTLGFISSFYI*RIQPLF
Trigger: GAAGAGAGGCTGAATCCTGCAGATATAAAAAGAGCT...GATGAAGCCAAGAGTATCAGAGATGTACCTACCCTTCTGGGAGCCAAACTGGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000442019.6
ENST00000458291.6
CDS-3UTR CCA 90 bp TCATCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTATCTCTCCACTGCAGTaGATTAGAGGCGGGCTTCTA +
Preference number: 4 (lower is better)
Translates to: SSAWIDLASICSNDSSWSISPLQ*IRGGLL
Trigger: TAGAAGCCCGCCTCTAATCCACTGCAGTGGAGAGAT...ACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR CCA 90 bp CATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGGTTGACGAATTGATGATGTCCTaGCATGTGAGAAGTCCCACC +
Preference number: 4 (lower is better)
Translates to: HGLIWLAYVVMTLPGVVDELMMS*HVRSPT
Trigger: GGTGGGACTTCTCACATGCCAGGACATCATCAATTC...GTCAACCACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR CCA 90 bp CATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGGTTGACTGTGCAATCTGGGAGTaGGATATTGCAAGCCTTTGG +
Preference number: 4 (lower is better)
Translates to: HGLIWLAYVVMTLPGVVDCAIWE*DIASLW
Trigger: CCAAAGGCTTGCAATATCCCACTCCCAGATTGCACA...GTCAACCACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR CCA 90 bp AAATCAAGCTCCTCATTTAGACTGTGGTACTTATCCAGTTTGGCTCCCAGAAGGAAAGAGCTGGCATCATaGTCATGGACTTCGGATGAT +
Preference number: 4 (lower is better)
Translates to: KSSSSFRLWYLSSLAPRRKELAS*SWTSDD
Trigger: ATCATCCGAAGTCCATGACCATGATGCCAGCTCTTT...CCTTCTGGGAGCCAAACTGGATAAGTACCACAGTCTAAATGAGGAGCTTGATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442019.6
ENST00000458291.6
CDS-3UTR CCA 90 bp ATCAGAATTGATGATGTCCTGGCATGTGAGAAGTCCCACCATCAGAGCCAGAAGATGAGTCTGTTGCAGTaGTTTTCTTTTGACTCTAGG +
Preference number: 4 (lower is better)
Translates to: IRIDDVLACEKSHHQSQKMSLLQ*FSFDSR
Trigger: CCTAGAGTCAAAAGAAAACCACTGCAACAGACTCAT...CTTCTGGCTCTGATGGTGGGACTTCTCACATGCCAGGACATCATCAATTCTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442019.6
CDS-3UTR TCA 90 bp CATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGGTTGACATGGTGTCAACTGGCTaGATTAGTGCATTCGTTGAG +
Preference number: 4 (lower is better)
Translates to: HGLIWLAYVVMTLPGVVDMVSTG*ISAFVE
Trigger: CTCAACGAATGCACTAATTCAGCCAGTTGACACCAT...GTCAACCACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR TCA 90 bp CATCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGATGGTGTCAACTGGCTaGATTAGTGCATTCGTTGAG +
Preference number: 4 (lower is better)
Translates to: HLHGLIWLAYVVMTLPGVMVSTG*ISAFVE
Trigger: CTCAACGAATGCACTAATTCAGCCAGTTGACACCAT...CACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR TCA 90 bp CATCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGTCAAGGAAGATATGCTaGTGGTGTCAACTGGCTGAA +
Preference number: 4 (lower is better)
Translates to: HLHGLIWLAYVVMTLPGVSRKIC*WCQLAE
Trigger: TTCAGCCAGTTGACACCATCAGCATATCTTCCTTGA...CACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR TCA 90 bp CATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGGTTGACTCAAGGAAGATATGCTaGTGGTGTCAACTGGCTGAA +
Preference number: 4 (lower is better)
Translates to: HGLIWLAYVVMTLPGVVDSRKIC*WCQLAE
Trigger: TTCAGCCAGTTGACACCATCAGCATATCTTCCTTGA...GTCAACCACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR TCA 90 bp TCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGGTCTTTTCATAACTGACTaGCATCTCAGGAATCTCCCC +
Preference number: 4 (lower is better)
Translates to: SAWIDLASICSNDSSWSGLFITD*HLRNLP
Trigger: GGGGAGATTCCTGAGATGTCAGTCAGTTATGAAAAG...ACCACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR TCA 90 bp CATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGGTTGACCTTTTCATAACTGACTaGCATCTCAGGAATCTCCCC +
Preference number: 4 (lower is better)
Translates to: HGLIWLAYVVMTLPGVVDLFITD*HLRNLP
Trigger: GGGGAGATTCCTGAGATGTCAGTCAGTTATGAAAAG...GTCAACCACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR TCA 90 bp AAATCAAGCTCCTCATTTAGACTGTGGTACTTATCCAGTTTGGCTCCCAGAAGGAAAGCCATGTCCTCTTaGACAGGTTGTAAGCTTTCA +
Preference number: 4 (lower is better)
Translates to: KSSSSFRLWYLSSLAPRRKAMSS*TGCKLS
Trigger: TGAAAGCTTACAACCTGTTCAAGAGGACATGGCTTT...CCTTCTGGGAGCCAAACTGGATAAGTACCACAGTCTAAATGAGGAGCTTGATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442019.6
ENST00000458291.6
CDS-3UTR TCA 90 bp TTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGGTTGACAAAAATCCTCTCTTCACAAGGTaGGCAATCCGGGAGCAGATT +
Preference number: 4 (lower is better)
Translates to: LIWLAYVVMTLPGVVDKNPLFTR*AIREQI
Trigger: AATCTGCTCCCGGATTGCTCACCTTGTGAAGAGAGG...ATTTTTGTCAACCACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR TCA 90 bp AGTTCTTGGATTCGCACTTCCTGCTTTCTGTTAGTATGTTTTAATTTCTGCAAGCCTCTCTTCACAAGGTaGGCAATCCGGGAGCAGATT +
Preference number: 4 (lower is better)
Translates to: SSWIRTSCFLLVCFNFCKPLFTR*AIREQI
Trigger: AATCTGCTCCCGGATTGCTCACCTTGTGAAGAGAGG...CTTGCAGAAATTAAAACATACTAACAGAAAGCAGGAAGTGCGAATCCAAGAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442019.6
CDS-3UTR TCA 90 bp CATCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGACTCTTGGCTTCATCTaGATCACAGTCTATGACCTC +
Preference number: 4 (lower is better)
Translates to: HLHGLIWLAYVVMTLPGVTLGFI*ITVYDL
Trigger: GAGGTCATAGACTGTGATTCAGATGAAGCCAAGAGT...CACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296742.11
CDS-3UTR TCA 90 bp TTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGGTTGACAAAAATCTCAACACGCCTTCCTaGGAGCACAGAACATCCACA +
Preference number: 4 (lower is better)
Translates to: LIWLAYVVMTLPGVVDKNLNTPS*EHRTST
Trigger: TGTGGATGTTCTGTGCTCTCAGGAAGGCGTGTTGAG...ATTTTTGTCAACCACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000502583.6
CDS-3UTR GCA 90 bp ATATATCATCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTTCAGCATCTCTCCACTaGAGTGGATTAGAGGCGGGC +
Preference number: 4 (lower is better)
Translates to: IYHLHGLIWLAYVVMTLPSASLH*SGLEAG
Trigger: GCCCGCCTCTAATCCACTGCAGTGGAGAGATGCTGA...AGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGATGATATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR GCA 90 bp TCATCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTAAGCTTTCAGCACTTTaGTCCCAGTCAGGCATCTCA +
Preference number: 4 (lower is better)
Translates to: SSAWIDLASICSNDSSWSKLSAL*SQSGIS
Trigger: TGAGATGCCTGACTGGGAGCAAAGTGCTGAAAGCTT...ACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR CCA 90 bp TTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGGTTGACAAAAATGGATCCATAGTTTCTTaGACCCACGCTACGGACCTG +
Preference number: 4 (lower is better)
Translates to: LIWLAYVVMTLPGVVDKNGSIVS*THATDL
Trigger: CAGGTCCGTAGCGTGGGTCCAAGAAACTATGGATCC...ATTTTTGTCAACCACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR CCA 90 bp TTTGTGATCAAGAAATCAAGCTCCTCATTTAGACTGTGGTACTTATCCAGTTTGGGATCCATAGTTTCTTaGACCCACGCTACGGACCTG +
Preference number: 4 (lower is better)
Translates to: FVIKKSSSSFRLWYLSSLGSIVS*THATDL
Trigger: CAGGTCCGTAGCGTGGGTCCAAGAAACTATGGATCC...CAAACTGGATAAGTACCACAGTCTAAATGAGGAGCTTGATTTCTTGATCACAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442019.6
ENST00000458291.6
CDS-3UTR CCA 90 bp CATCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGCTACACTGGAGTTCTTaGATTCGCACTTCCTGCTTT +
Preference number: 4 (lower is better)
Translates to: HLHGLIWLAYVVMTLPGVLHWSS*IRTSCF
Trigger: AAAGCAGGAAGTGCGAATCCAAGAACTCCAGTGTAG...CACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR CCA 90 bp TCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGGTCTACACTGGAGTTCTTaGATTCGCACTTCCTGCTTT +
Preference number: 4 (lower is better)
Translates to: SAWIDLASICSNDSSWSGLHWSS*IRTSCF
Trigger: AAAGCAGGAAGTGCGAATCCAAGAACTCCAGTGTAG...ACCACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR CCA 90 bp TCATCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGAATTGATGATGTCCTaGCATGTGAGAAGTCCCACC +
Preference number: 4 (lower is better)
Translates to: SSAWIDLASICSNDSSWSELMMS*HVRSPT
Trigger: GGTGGGACTTCTCACATGCCAGGACATCATCAATTC...ACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR CCA 90 bp CCCAGTTTTGTGATCAAGAAATCAAGCTCCTCATTTAGACTGTGGTACTTATCCGAATTGATGATGTCCTaGCATGTGAGAAGTCCCACC +
Preference number: 4 (lower is better)
Translates to: PSFVIKKSSSSFRLWYLSELMMS*HVRSPT
Trigger: GGTGGGACTTCTCACATGCCAGGACATCATCAATTC...GGATAAGTACCACAGTCTAAATGAGGAGCTTGATTTCTTGATCACAAAACTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442019.6
ENST00000458291.6
CDS-3UTR CCA 90 bp TCATCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTTGTGCAATCTGGGAGTaGGATATTGCAAGCCTTTGG +
Preference number: 4 (lower is better)
Translates to: SSAWIDLASICSNDSSWSCAIWE*DIASLW
Trigger: CCAAAGGCTTGCAATATCCCACTCCCAGATTGCACA...ACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR CCA 90 bp CATCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGTCCAAATGTGCAATCTaGGAGTGGGATATTGCAAGC +
Preference number: 4 (lower is better)
Translates to: HLHGLIWLAYVVMTLPGVSKCAI*EWDIAS
Trigger: GCTTGCAATATCCCACTCCCAGATTGCACATTTGGA...CACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR CCA 90 bp CATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGGTTGACAAAGAGCTGGCATCATaGTCATGGACTTCGGATGAT +
Preference number: 4 (lower is better)
Translates to: HGLIWLAYVVMTLPGVVDKELAS*SWTSDD
Trigger: ATCATCCGAAGTCCATGACCATGATGCCAGCTCTTT...GTCAACCACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR CCA 90 bp ATCCAGTTTGGCTCCCAGAAGGGTAGGTACATCTCTGATACTCTTGGCTTCATCCTGCATGGATTGATTTaGCTAGCATATGTAGTAATG +
Preference number: 4 (lower is better)
Translates to: IQFGSQKGRYISDTLGFILHGLI*LAYVVM
Trigger: CATTACTACATATGCTAGCCAAATCAATCCATGCAG...GATGAAGCCAAGAGTATCAGAGATGTACCTACCCTTCTGGGAGCCAAACTGGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442019.6
ENST00000458291.6
3UTR CAA 72 bp TTGGCTCCCAGAAGGGTAGGTACATCTCTGATACTCTaGGCTTCATCTGAATCACAGTCTATGACCTTAATA +
Preference number: 4 (lower is better)
Translates to: LAPRRVGTSLIL*ASSESQSMTLI
Trigger: TATTAAGGTCATAGACTGTGATTCAGATGAAGCCAAGAGTATCAGAGATGTACCTACCCTTCTGGGAGCCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442019.6
CDS-3UTR TCA 90 bp TCATCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTCTTTTCATAACTGACTaGCATCTCAGGAATCTCCCC +
Preference number: 4 (lower is better)
Translates to: SSAWIDLASICSNDSSWSLFITD*HLRNLP
Trigger: GGGGAGATTCCTGAGATGTCAGTCAGTTATGAAAAG...ACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR TCA 90 bp CATCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGAAAGCCATGTCCTCTTaGACAGGTTGTAAGCTTTCA +
Preference number: 4 (lower is better)
Translates to: HLHGLIWLAYVVMTLPGVKAMSS*TGCKLS
Trigger: TGAAAGCTTACAACCTGTTCAAGAGGACATGGCTTT...CACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR TCA 90 bp TCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGGTAAAGCCATGTCCTCTTaGACAGGTTGTAAGCTTTCA +
Preference number: 4 (lower is better)
Translates to: SAWIDLASICSNDSSWSGKAMSS*TGCKLS
Trigger: TGAAAGCTTACAACCTGTTCAAGAGGACATGGCTTT...ACCACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR TCA 90 bp CAGGTTACTACACTGGAGTTCTTGGATTCGCACTTCCTGCTTTCTGTTAGTATGTCATTCCTGGATTCCTaGAGATGTTTTTGCGTGTTA +
Preference number: 4 (lower is better)
Translates to: QVTTLEFLDSHFLLSVSMSFLDS*RCFCVL
Trigger: TAACACGCAAAAACATCTTCAGGAATCCAGGAATGA...CATACTAACAGAAAGCAGGAAGTGCGAATCCAAGAACTCCAGTGTAGTAACCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000442019.6
CDS-3UTR TCA 90 bp ATATATCATCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTCCTCTCTTCACAAGGTaGGCAATCCGGGAGCAGATT +
Preference number: 4 (lower is better)
Translates to: IYHLHGLIWLAYVVMTLPPLFTR*AIREQI
Trigger: AATCTGCTCCCGGATTGCTCACCTTGTGAAGAGAGG...AGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGATGATATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR TCA 90 bp AAATCAAGCTCCTCATTTAGACTGTGGTACTTATCCAGTTTGGCTCCCAGAAGGATTTTGGAGGCCAGCTaGGAAGCTCTTTTTATATCT +
Preference number: 4 (lower is better)
Translates to: KSSSSFRLWYLSSLAPRRILEAS*EALFIS
Trigger: AGATATAAAAAGAGCTTCTCAGCTGGCCTCCAAAAT...CCTTCTGGGAGCCAAACTGGATAAGTACCACAGTCTAAATGAGGAGCTTGATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000442019.6
ENST00000458291.6
CDS-3UTR TCA 90 bp CATCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGGATGTCCCAGTTTTGTaGTCAAGAAATCAAGCTCCT +
Preference number: 4 (lower is better)
Translates to: HLHGLIWLAYVVMTLPGVDVPVL*SRNQAP
Trigger: AGGAGCTTGATTTCTTGATCACAAAACTGGGACATC...CACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR GCA 90 bp ATCAGAATTGATGATGTCCTGGCATGTGAGAAGTCCCACCATCAGAGCCAGAAGACAAATTGTCTAGTGTaGCATAAGCATCTTCACAAA +
Preference number: 4 (lower is better)
Translates to: IRIDDVLACEKSHHQSQKTNCLV*HKHLHK
Trigger: TTTGTGAAGATGCTTATGGCACACTAGACAATTTGT...CTTCTGGCTCTGATGGTGGGACTTCTCACATGCCAGGACATCATCAATTCTGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442019.6
CDS-3UTR GCA 90 bp ATCCAGTTTGGCTCCCAGAAGGGTAGGTACATCTCTGATACTCTTGGCTTCATCACAAATTGTCTAGTGTaGCATAAGCATCTTCACAAA +
Preference number: 4 (lower is better)
Translates to: IQFGSQKGRYISDTLGFITNCLV*HKHLHK
Trigger: TTTGTGAAGATGCTTATGGCACACTAGACAATTTGT...GATGAAGCCAAGAGTATCAGAGATGTACCTACCCTTCTGGGAGCCAAACTGGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442019.6
ENST00000458291.6
CDS-3UTR GCA 90 bp CTTATCCAGTTTGGCTCCCAGAAGGGTAGGTACATCTCTGATACTCTTGGCTTCAAGTTGGTCTGTATTTaGAGAAACACTAGTTTCCAT +
Preference number: 4 (lower is better)
Translates to: LIQFGSQKGRYISDTLGFKLVCI*RNTSFH
Trigger: ATGGAAACTAGTGTTTCTGCAAATACAGACCAACTT...GAAGCCAAGAGTATCAGAGATGTACCTACCCTTCTGGGAGCCAAACTGGATAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442019.6
ENST00000458291.6
CDS-3UTR GCA 90 bp ATATATCATCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTCACTCCTCCAGGAAATaGCTGCCGAAGACCAAGTTG +
Preference number: 4 (lower is better)
Translates to: IYHLHGLIWLAYVVMTLPHSSRK*LPKTKL
Trigger: CAACTTGGTCTTCGGCAGGCATTTCCTGGAGGAGTG...AGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGATGATATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR GCA 90 bp TTTGTGATCAAGAAATCAAGCTCCTCATTTAGACTGTGGTACTTATCCAGTTTGCTGGGAGTGGGATATTaGAAGCCTTTGGTCAGCACA +
Preference number: 4 (lower is better)
Translates to: FVIKKSSSSFRLWYLSSLLGVGY*KPLVST
Trigger: TGTGCTGACCAAAGGCTTGCAATATCCCACTCCCAG...CAAACTGGATAAGTACCACAGTCTAAATGAGGAGCTTGATTTCTTGATCACAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442019.6
ENST00000458291.6
CDS-3UTR GCA 90 bp TTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGGTTGACAAAAATGCAAGTCACAAGTGGTaGCGGTGGTTTCCATACAGA +
Preference number: 4 (lower is better)
Translates to: LIWLAYVVMTLPGVVDKNASHKW*RWFPYR
Trigger: TCTGTATGGAAACCACCGGCACCACTTGTGACTTGC...ATTTTTGTCAACCACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR CCA 90 bp ATATATCATCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGATCCATAGTTTCTTaGACCCACGCTACGGACCTG +
Preference number: 4 (lower is better)
Translates to: IYHLHGLIWLAYVVMTLPGSIVS*THATDL
Trigger: CAGGTCCGTAGCGTGGGTCCAAGAAACTATGGATCC...AGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGATGATATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR CCA 90 bp TTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGGTTGACAAAAATATCTCTCCACTGCAGTaGATTAGAGGCGGGCTTCTA +
Preference number: 4 (lower is better)
Translates to: LIWLAYVVMTLPGVVDKNISPLQ*IRGGLL
Trigger: TAGAAGCCCGCCTCTAATCCACTGCAGTGGAGAGAT...ATTTTTGTCAACCACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR CCA 90 bp TCATCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTCTACACTGGAGTTCTTaGATTCGCACTTCCTGCTTT +
Preference number: 4 (lower is better)
Translates to: SSAWIDLASICSNDSSWSLHWSS*IRTSCF
Trigger: AAAGCAGGAAGTGCGAATCCAAGAACTCCAGTGTAG...ACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR CCA 90 bp CATCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGTACAGGTTACTACACTaGAGTTCTTGGATTCGCACT +
Preference number: 4 (lower is better)
Translates to: HLHGLIWLAYVVMTLPGVYRLLH*SSWIRT
Trigger: AGTGCGAATCCAAGAACTCCAGTGTAGTAACCTGTA...CACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR CCA 90 bp TCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGGTTACAGGTTACTACACTaGAGTTCTTGGATTCGCACT +
Preference number: 4 (lower is better)
Translates to: SAWIDLASICSNDSSWSGYRLLH*SSWIRT
Trigger: AGTGCGAATCCAAGAACTCCAGTGTAGTAACCTGTA...ACCACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR CCA 90 bp CAGGTTACTACACTGGAGTTCTTGGATTCGCACTTCCTGCTTTCTGTTAGTATGTCCTCATTTAGACTGTaGTACTTATCCAGTTTGGCT +
Preference number: 4 (lower is better)
Translates to: QVTTLEFLDSHFLLSVSMSSFRL*YLSSLA
Trigger: AGCCAAACTGGATAAGTACCACAGTCTAAATGAGGA...CATACTAACAGAAAGCAGGAAGTGCGAATCCAAGAACTCCAGTGTAGTAACCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442019.6
CDS-3UTR CCA 90 bp TCATCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTTCCAAATGTGCAATCTaGGAGTGGGATATTGCAAGC +
Preference number: 4 (lower is better)
Translates to: SSAWIDLASICSNDSSWSSKCAI*EWDIAS
Trigger: GCTTGCAATATCCCACTCCCAGATTGCACATTTGGA...ACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR CCA 90 bp CATCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGCTGGCATCATGGTCATaGACTTCGGATGATTTTCTA +
Preference number: 4 (lower is better)
Translates to: HLHGLIWLAYVVMTLPGVLASWS*TSDDFL
Trigger: TAGAAAATCATCCGAAGTCCATGACCATGATGCCAG...CACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR CCA 90 bp ATATATCATCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGAGGCAAGTCACAAGTaGTGCCGGTGGTTTCCATAC +
Preference number: 4 (lower is better)
Translates to: IYHLHGLIWLAYVVMTLPEASHK*CRWFPY
Trigger: GTATGGAAACCACCGGCACCACTTGTGACTTGCCTC...AGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGATGATATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR TCA 90 bp CATCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGAATGCTTCTACCCAGTaGAATTTGCAAACGGTTTCA +
Preference number: 4 (lower is better)
Translates to: HLHGLIWLAYVVMTLPGVNASTQ*NLQTVS
Trigger: TGAAACCGTTTGCAAATTTCACTGGGTAGAAGCATT...CACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR TCA 90 bp CATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGGTTGACCTTCCTTTTCATAACTaGCTGACATCTCAGGAATCT +
Preference number: 4 (lower is better)
Translates to: HGLIWLAYVVMTLPGVVDLPFHN*LTSQES
Trigger: AGATTCCTGAGATGTCAGTCAGTTATGAAAAGGAAG...GTCAACCACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR TCA 90 bp CATCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGCTTCCTTTTCATAACTaGCTGACATCTCAGGAATCT +
Preference number: 4 (lower is better)
Translates to: HLHGLIWLAYVVMTLPGVLPFHN*LTSQES
Trigger: AGATTCCTGAGATGTCAGTCAGTTATGAAAAGGAAG...CACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR TCA 90 bp TCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGGTCTTCCTTTTCATAACTaGCTGACATCTCAGGAATCT +
Preference number: 4 (lower is better)
Translates to: SAWIDLASICSNDSSWSGLPFHN*LTSQES
Trigger: AGATTCCTGAGATGTCAGTCAGTTATGAAAAGGAAG...ACCACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR TCA 90 bp CATCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGTCATTCCTGGATTCCTaGAGATGTTTTTGCGTGTTA +
Preference number: 4 (lower is better)
Translates to: HLHGLIWLAYVVMTLPGVSFLDS*RCFCVL
Trigger: TAACACGCAAAAACATCTTCAGGAATCCAGGAATGA...CACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR TCA 90 bp CATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGGTTGACATTTTGGAGGCCAGCTaGGAAGCTCTTTTTATATCT +
Preference number: 4 (lower is better)
Translates to: HGLIWLAYVVMTLPGVVDILEAS*EALFIS
Trigger: AGATATAAAAAGAGCTTCTCAGCTGGCCTCCAAAAT...GTCAACCACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR TCA 90 bp TCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGGTATTTTGGAGGCCAGCTaGGAAGCTCTTTTTATATCT +
Preference number: 4 (lower is better)
Translates to: SAWIDLASICSNDSSWSGILEAS*EALFIS
Trigger: AGATATAAAAAGAGCTTCTCAGCTGGCCTCCAAAAT...ACCACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR TCA 90 bp CATCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGCCTTCTCACTCTCTTTaGAATGTTCAGCATCAGAAT +
Preference number: 4 (lower is better)
Translates to: HLHGLIWLAYVVMTLPGVPSHSL*NVQHQN
Trigger: ATTCTGATGCTGAACATTTCAAAGAGAGTGAGAAGG...CACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296742.11
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR TCA 90 bp TCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGGTCATGGTATCCGATTCTaGCATGCTTTCTACTTTTTC +
Preference number: 4 (lower is better)
Translates to: SAWIDLASICSNDSSWSGHGIRF*HAFYFF
Trigger: GAAAAAGTAGAAAGCATGTCAGAATCGGATACCATG...ACCACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR TCA 90 bp CATCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGCATGGTATCCGATTCTaGCATGCTTTCTACTTTTTC +
Preference number: 4 (lower is better)
Translates to: HLHGLIWLAYVVMTLPGVHGIRF*HAFYFF
Trigger: GAAAAAGTAGAAAGCATGTCAGAATCGGATACCATG...CACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR TCA 90 bp CATCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGCTTGAGAAAGATTGCTaGCATTCATGGTATCCGATT +
Preference number: 4 (lower is better)
Translates to: HLHGLIWLAYVVMTLPGVLEKDC*HSWYPI
Trigger: AATCGGATACCATGAATGTCAGCAATCTTTCTCAAG...CACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR TCA 90 bp TCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGGTGAAAGCATTACACCTTaGGAAAGATTGCTGACATTC +
Preference number: 4 (lower is better)
Translates to: SAWIDLASICSNDSSWSGESITP*ERLLTF
Trigger: GAATGTCAGCAATCTTTCTCAAGGTGTAATGCTTTC...ACCACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR TCA 90 bp TCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGGTACAGATTGGAGAATGTaGAAGCATTACACCTTGAGA +
Preference number: 4 (lower is better)
Translates to: SAWIDLASICSNDSSWSGTDWRM*KHYTLR
Trigger: TCTCAAGGTGTAATGCTTTCACATTCTCCAATCTGT...ACCACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR TCA 90 bp CATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGGTTGACACAGATTGGAGAATGTaGAAGCATTACACCTTGAGA +
Preference number: 4 (lower is better)
Translates to: HGLIWLAYVVMTLPGVVDTDWRM*KHYTLR
Trigger: TCTCAAGGTGTAATGCTTTCACATTCTCCAATCTGT...GTCAACCACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR TCA 90 bp TCATCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTACTCTTGGCTTCATCTaGATCACAGTCTATGACCTT +
Preference number: 4 (lower is better)
Translates to: SSAWIDLASICSNDSSWSTLGFI*ITVYDL
Trigger: AAGGTCATAGACTGTGATTCAGATGAAGCCAAGAGT...ACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGATGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379918.8
ENST00000442019.6
ENST00000502583.6
CDS-3UTR TCA 90 bp TCATCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGATGTCCCAGTTTTGTaGTCAAGAAATCAAGCTCCT +
Preference number: 4 (lower is better)
Translates to: SSAWIDLASICSNDSSWSDVPVL*SRNQAP
Trigger: AGGAGCTTGATTTCTTGATCACAAAACTGGGACATC...ACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR GCA 90 bp TTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGGTTGACAAAAATCCTCTCCACACCCTCTaGTGTGACTTCCTTTTCATA +
Preference number: 4 (lower is better)
Translates to: LIWLAYVVMTLPGVVDKNPLHTL*CDFLFI
Trigger: TATGAAAAGGAAGTCACAGCAGAGGGTGTGGAGAGG...ATTTTTGTCAACCACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR GCA 90 bp TTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGGTTGACAAAAATAAGCTTTCAGCACTTTaGTCCCAGTCAGGCATCTCA +
Preference number: 4 (lower is better)
Translates to: LIWLAYVVMTLPGVVDKNKLSAL*SQSGIS
Trigger: TGAGATGCCTGACTGGGAGCAAAGTGCTGAAAGCTT...ATTTTTGTCAACCACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR GCA 90 bp CATCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGTCACTCCTTGCAACCTaGTGTTTAAGTTTTGCATTC +
Preference number: 4 (lower is better)
Translates to: HLHGLIWLAYVVMTLPGVSLLAT*CLSFAF
Trigger: GAATGCAAAACTTAAACAGCAGGTTGCAAGGAGTGA...CACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR GCA 90 bp TCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGGTTCACTCCTTGCAACCTaGTGTTTAAGTTTTGCATTC +
Preference number: 4 (lower is better)
Translates to: SAWIDLASICSNDSSWSGSLLAT*CLSFAF
Trigger: GAATGCAAAACTTAAACAGCAGGTTGCAAGGAGTGA...ACCACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR GCA 90 bp TCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGGTTTGCTCTTCACTCCTTaGAACCTGCTGTTTAAGTTT +
Preference number: 4 (lower is better)
Translates to: SAWIDLASICSNDSSWSGLLFTP*NLLFKF
Trigger: AAACTTAAACAGCAGGTTGCAAGGAGTGAAGAGCAA...ACCACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR GCA 90 bp CATCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGAGCTCTTTTTATATCTaGAGGATTCAGCCTCTCTTC +
Preference number: 4 (lower is better)
Translates to: HLHGLIWLAYVVMTLPGVSSFYI*RIQPLF
Trigger: GAAGAGAGGCTGAATCCTGCAGATATAAAAAGAGCT...CACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR GCA 90 bp ATATATCATCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTCTGGGAGTGGGATATTaGAAGCCTTTGGTCAGCACA +
Preference number: 4 (lower is better)
Translates to: IYHLHGLIWLAYVVMTLPLGVGY*KPLVST
Trigger: TGTGCTGACCAAAGGCTTGCAATATCCCACTCCCAG...AGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGATGATATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR CCA 90 bp CAGGTTACTACACTGGAGTTCTTGGATTCGCACTTCCTGCTTTCTGTTAGTATGTACTCGTTACCAAGTTaGTCTGTATTTGCAGAAACA +
Preference number: 4 (lower is better)
Translates to: QVTTLEFLDSHFLLSVSMYSLPS*SVFAET
Trigger: TGTTTCTGCAAATACAGACCAACTTGGTAACGAGTA...CATACTAACAGAAAGCAGGAAGTGCGAATCCAAGAACTCCAGTGTAGTAACCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442019.6
CDS-3UTR CCA 90 bp TCATCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTAAGAACTCTTGTTCTTaGGCCTCTTTTTCCCGTTTC +
Preference number: 4 (lower is better)
Translates to: SSAWIDLASICSNDSSWSKNSCS*ASFSRF
Trigger: GAAACGGGAAAAAGAGGCCCAAGAACAAGAGTTCTT...ACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGATGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR CCA 90 bp CATCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGTCCTCATTTAGACTGTaGTACTTATCCAGTTTGGCT +
Preference number: 4 (lower is better)
Translates to: HLHGLIWLAYVVMTLPGVSSFRL*YLSSLA
Trigger: AGCCAAACTGGATAAGTACCACAGTCTAAATGAGGA...CACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR CCA 90 bp GGAATTCCTCCTGTAAAGACAAGAACTCTTGTTCTTGGGCCTCTTTTTCCCGTTGATATTGCAAGCCTTTaGTCAGCACATTCAATGATT +
Preference number: 4 (lower is better)
Translates to: GIPPVKTRTLVLGPLFPVDIASL*SAHSMI
Trigger: AATCATTGAATGTGCTGACCAAAGGCTTGCAATATC...AACGGGAAAAAGAGGCCCAAGAACAAGAGTTCTTGTCTTTACAGGAGGAATTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000442019.6
CDS-3UTR CCA 90 bp CATCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGATGAGTCTGTTGCAGTaGTTTTCTTTTGACTCTAGG +
Preference number: 4 (lower is better)
Translates to: HLHGLIWLAYVVMTLPGVMSLLQ*FSFDSR
Trigger: CCTAGAGTCAAAAGAAAACCACTGCAACAGACTCAT...CACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR CCA 90 bp TCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGGTATGAGTCTGTTGCAGTaGTTTTCTTTTGACTCTAGG +
Preference number: 4 (lower is better)
Translates to: SAWIDLASICSNDSSWSGMSLLQ*FSFDSR
Trigger: CCTAGAGTCAAAAGAAAACCACTGCAACAGACTCAT...ACCACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR TCA 90 bp AGTTTTGTGATCAAGAAATCAAGCTCCTCATTTAGACTGTGGTACTTATCCAGTATGGTGTCAACTGGCTaGATTAGTGCATTCGTTGAG +
Preference number: 4 (lower is better)
Translates to: SFVIKKSSSSFRLWYLSSMVSTG*ISAFVE
Trigger: CTCAACGAATGCACTAATTCAGCCAGTTGACACCAT...ACTGGATAAGTACCACAGTCTAAATGAGGAGCTTGATTTCTTGATCACAAAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442019.6
ENST00000458291.6
CDS-3UTR TCA 90 bp TTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGGTTGACAAAAATTCAAGGAAGATATGCTaGTGGTGTCAACTGGCTGAA +
Preference number: 4 (lower is better)
Translates to: LIWLAYVVMTLPGVVDKNSRKIC*WCQLAE
Trigger: TTCAGCCAGTTGACACCATCAGCATATCTTCCTTGA...ATTTTTGTCAACCACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR TCA 90 bp TCATCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTAATGCTTCTACCCAGTaGAATTTGCAAACGGTTTCA +
Preference number: 4 (lower is better)
Translates to: SSAWIDLASICSNDSSWSNASTQ*NLQTVS
Trigger: TGAAACCGTTTGCAAATTTCACTGGGTAGAAGCATT...ACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGATGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR TCA 90 bp AGTTCTTGGATTCGCACTTCCTGCTTTCTGTTAGTATGTTTTAATTTCTGCAAGCTTTTCATAACTGACTaGCATCTCAGGAATCTCCCC +
Preference number: 4 (lower is better)
Translates to: SSWIRTSCFLLVCFNFCKLFITD*HLRNLP
Trigger: GGGGAGATTCCTGAGATGTCAGTCAGTTATGAAAAG...CTTGCAGAAATTAAAACATACTAACAGAAAGCAGGAAGTGCGAATCCAAGAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442019.6
CDS-3UTR TCA 90 bp CCCAGTTTTGTGATCAAGAAATCAAGCTCCTCATTTAGACTGTGGTACTTATCCTCATTCCTGGATTCCTaGAGATGTTTTTGCGTGTTA +
Preference number: 4 (lower is better)
Translates to: PSFVIKKSSSSFRLWYLSSFLDS*RCFCVL
Trigger: TAACACGCAAAAACATCTTCAGGAATCCAGGAATGA...GGATAAGTACCACAGTCTAAATGAGGAGCTTGATTTCTTGATCACAAAACTGGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000442019.6
ENST00000458291.6
CDS-3UTR TCA 90 bp CCCAGTTTTGTGATCAAGAAATCAAGCTCCTCATTTAGACTGTGGTACTTATCCCCTTCTCACTCTCTTTaGAATGTTCAGCATCAGAAT +
Preference number: 4 (lower is better)
Translates to: PSFVIKKSSSSFRLWYLSPSHSL*NVQHQN
Trigger: ATTCTGATGCTGAACATTTCAAAGAGAGTGAGAAGG...GGATAAGTACCACAGTCTAAATGAGGAGCTTGATTTCTTGATCACAAAACTGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442019.6
ENST00000458291.6
CDS-3UTR TCA 90 bp TCATCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTCTTGAGAAAGATTGCTaGCATTCATGGTATCCGATT +
Preference number: 4 (lower is better)
Translates to: SSAWIDLASICSNDSSWSLEKDC*HSWYPI
Trigger: AATCGGATACCATGAATGTCAGCAATCTTTCTCAAG...ACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGATGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR TCA 90 bp TCATCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGAAAGCATTACACCTTaGGAAAGATTGCTGACATTC +
Preference number: 4 (lower is better)
Translates to: SSAWIDLASICSNDSSWSESITP*ERLLTF
Trigger: GAATGTCAGCAATCTTTCTCAAGGTGTAATGCTTTC...ACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGATGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR TCA 90 bp TCATCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGCTTCTCACTCTCTTTaGAATGTTCAGCATCAGAAT +
Preference number: 4 (lower is better)
Translates to: SSAWIDLASICSNDSSWSASHSL*NVQHQN
Trigger: ATTCTGATGCTGAACATTTCAAAGAGAGTGAGAAGC...ACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGATGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379918.8
CDS-3UTR TCA 90 bp TCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGGTTGTCATTTTCTTCAATaGGTCTGTTGCAGTGGTTTT +
Preference number: 4 (lower is better)
Translates to: SAWIDLASICSNDSSWSGCHFLQ*VCCSGF
Trigger: AAAACCACTGCAACAGACTCATTGAAGAAAATGACA...ACCACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR TCA 90 bp CATCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGTGTCATTTTCTTCAATaGGTCTGTTGCAGTGGTTTT +
Preference number: 4 (lower is better)
Translates to: HLHGLIWLAYVVMTLPGVCHFLQ*VCCSGF
Trigger: AAAACCACTGCAACAGACTCATTGAAGAAAATGACA...CACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR GCA 90 bp TCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGGTCTACCCAGTGAAATTTaGAAACGGTTTCAAATTGTC +
Preference number: 4 (lower is better)
Translates to: SAWIDLASICSNDSSWSGLPSEI*KRFQIV
Trigger: GACAATTTGAAACCGTTTGCAAATTTCACTGGGTAG...ACCACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR GCA 90 bp CATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGGTTGACCTACCCAGTGAAATTTaGAAACGGTTTCAAATTGTC +
Preference number: 4 (lower is better)
Translates to: HGLIWLAYVVMTLPGVVDLPSEI*KRFQIV
Trigger: GACAATTTGAAACCGTTTGCAAATTTCACTGGGTAG...GTCAACCACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR GCA 90 bp ATATATCATCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTACAGTTCTCCCGACATaGTTCACTCCTCCAGGAAAT +
Preference number: 4 (lower is better)
Translates to: IYHLHGLIWLAYVVMTLPTVLPT*FTPPGN
Trigger: ATTTCCTGGAGGAGTGAAGCATGTCGGGAGAACTGT...AGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGATGATATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR GCA 90 bp ATATATCATCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTAAGCTTTCAGCACTTTaGTCCCAGTCAGGCATCTCA +
Preference number: 4 (lower is better)
Translates to: IYHLHGLIWLAYVVMTLPKLSAL*SQSGIS
Trigger: TGAGATGCCTGACTGGGAGCAAAGTGCTGAAAGCTT...AGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGATGATATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR GCA 90 bp CATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGGTTGACCCTCTTCTTCTTTCTTaGTTAAGGTTTTGTCCATCT +
Preference number: 4 (lower is better)
Translates to: HGLIWLAYVVMTLPGVVDPLLLS*LRFCPS
Trigger: AGATGGACAAAACCTTAAGCAAGAAAGAAGAAGAGG...GTCAACCACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR GCA 90 bp TCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGGTCCTCTTCTTCTTTCTTaGTTAAGGTTTTGTCCATCT +
Preference number: 4 (lower is better)
Translates to: SAWIDLASICSNDSSWSGPLLLS*LRFCPS
Trigger: AGATGGACAAAACCTTAAGCAAGAAAGAAGAAGAGG...ACCACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR GCA 90 bp TCATCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTTTGCTCTTCACTCCTTaGAACCTGCTGTTTAAGTTT +
Preference number: 4 (lower is better)
Translates to: SSAWIDLASICSNDSSWSLLFTP*NLLFKF
Trigger: AAACTTAAACAGCAGGTTGCAAGGAGTGAAGAGCAA...ACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGATGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR GCA 90 bp CCCAGTTTTGTGATCAAGAAATCAAGCTCCTCATTTAGACTGTGGTACTTATCCAGCTCTTTTTATATCTaGAGGATTCAGCCTCTCTTC +
Preference number: 4 (lower is better)
Translates to: PSFVIKKSSSSFRLWYLSSSFYI*RIQPLF
Trigger: GAAGAGAGGCTGAATCCTGCAGATATAAAAAGAGCT...GGATAAGTACCACAGTCTAAATGAGGAGCTTGATTTCTTGATCACAAAACTGGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000442019.6
ENST00000458291.6
CDS-3UTR GCA 90 bp CATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGGTTGACAGGCTCTTCAGTTTTTaGAGCATTATATCACTAACC +
Preference number: 4 (lower is better)
Translates to: HGLIWLAYVVMTLPGVVDRLFSF*SIISLT
Trigger: GGTTAGTGATATAATGCTGCAAAAACTGAAGAGCCT...GTCAACCACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000296742.11
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR GCA 90 bp CATCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGAGGCTCTTCAGTTTTTaGAGCATTATATCACTAACC +
Preference number: 4 (lower is better)
Translates to: HLHGLIWLAYVVMTLPGVRLFSF*SIISLT
Trigger: GGTTAGTGATATAATGCTGCAAAAACTGAAGAGCCT...CACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000296742.11
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR CCA 90 bp TCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGGTTACTCGTTACCAAGTTaGTCTGTATTTGCAGAAACA +
Preference number: 4 (lower is better)
Translates to: SAWIDLASICSNDSSWSGYSLPS*SVFAET
Trigger: TGTTTCTGCAAATACAGACCAACTTGGTAACGAGTA...ACCACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR CCA 90 bp CATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGGTTGACTACTCGTTACCAAGTTaGTCTGTATTTGCAGAAACA +
Preference number: 4 (lower is better)
Translates to: HGLIWLAYVVMTLPGVVDYSLPS*SVFAET
Trigger: TGTTTCTGCAAATACAGACCAACTTGGTAACGAGTA...GTCAACCACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR CCA 90 bp TTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGGTTGACAAAAATCTACACTGGAGTTCTTaGATTCGCACTTCCTGCTTT +
Preference number: 4 (lower is better)
Translates to: LIWLAYVVMTLPGVVDKNLHWSS*IRTSCF
Trigger: AAAGCAGGAAGTGCGAATCCAAGAACTCCAGTGTAG...ATTTTTGTCAACCACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR CCA 90 bp GGAATTCCTCCTGTAAAGACAAGAACTCTTGTTCTTGGGCCTCTTTTTCCCGTTTTTCCTTGTCATTCCTaGATTCCTGAAGATGTTTTT +
Preference number: 4 (lower is better)
Translates to: GIPPVKTRTLVLGPLFPVFPCHS*IPEDVF
Trigger: AAAAACATCTTCAGGAATCCAGGAATGACAAGGAAA...AACGGGAAAAAGAGGCCCAAGAACAAGAGTTCTTGTCTTTACAGGAGGAATTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000442019.6
CDS-3UTR CCA 90 bp ATATATCATCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGAATTGATGATGTCCTaGCATGTGAGAAGTCCCACC +
Preference number: 4 (lower is better)
Translates to: IYHLHGLIWLAYVVMTLPELMMS*HVRSPT
Trigger: GGTGGGACTTCTCACATGCCAGGACATCATCAATTC...AGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGATGATATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR CCA 90 bp TCATCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTTCCTCATTTAGACTGTaGTACTTATCCAGTTTGGCT +
Preference number: 4 (lower is better)
Translates to: SSAWIDLASICSNDSSWSSSFRL*YLSSLA
Trigger: AGCCAAACTGGATAAGTACCACAGTCTAAATGAGGA...ACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGATGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR CCA 90 bp TCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGGTGATATTGCAAGCCTTTaGTCAGCACATTCAATGATT +
Preference number: 4 (lower is better)
Translates to: SAWIDLASICSNDSSWSGDIASL*SAHSMI
Trigger: AATCATTGAATGTGCTGACCAAAGGCTTGCAATATC...ACCACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR CCA 90 bp ATATATCATCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTTGTGCAATCTGGGAGTaGGATATTGCAAGCCTTTGG +
Preference number: 4 (lower is better)
Translates to: IYHLHGLIWLAYVVMTLPCAIWE*DIASLW
Trigger: CCAAAGGCTTGCAATATCCCACTCCCAGATTGCACA...AGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGATGATATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR CCA 90 bp TTTGTGATCAAGAAATCAAGCTCCTCATTTAGACTGTGGTACTTATCCAGTTTGTCCAAATGTGCAATCTaGGAGTGGGATATTGCAAGC +
Preference number: 4 (lower is better)
Translates to: FVIKKSSSSFRLWYLSSLSKCAI*EWDIAS
Trigger: GCTTGCAATATCCCACTCCCAGATTGCACATTTGGA...CAAACTGGATAAGTACCACAGTCTAAATGAGGAGCTTGATTTCTTGATCACAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442019.6
ENST00000458291.6
CDS-3UTR CCA 90 bp TTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGGTTGACAAAAATTCCAAATGTGCAATCTaGGAGTGGGATATTGCAAGC +
Preference number: 4 (lower is better)
Translates to: LIWLAYVVMTLPGVVDKNSKCAI*EWDIAS
Trigger: GCTTGCAATATCCCACTCCCAGATTGCACATTTGGA...ATTTTTGTCAACCACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR CCA 90 bp CATCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGCTGCATGGATTGATTTaGCTAGCATATGTAGTAATG +
Preference number: 4 (lower is better)
Translates to: HLHGLIWLAYVVMTLPGVLHGLI*LAYVVM
Trigger: CATTACTACATATGCTAGCCAAATCAATCCATGCAG...CACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR CCA 90 bp TCATCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTATGAGTCTGTTGCAGTaGTTTTCTTTTGACTCTAGG +
Preference number: 4 (lower is better)
Translates to: SSAWIDLASICSNDSSWSMSLLQ*FSFDSR
Trigger: CCTAGAGTCAAAAGAAAACCACTGCAACAGACTCAT...ACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR TCA 90 bp ATATATCATCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTTCAAGGAAGATATGCTaGTGGTGTCAACTGGCTGAA +
Preference number: 4 (lower is better)
Translates to: IYHLHGLIWLAYVVMTLPSRKIC*WCQLAE
Trigger: TTCAGCCAGTTGACACCATCAGCATATCTTCCTTGA...AGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGATGATATAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR TCA 90 bp TTTGTGATCAAGAAATCAAGCTCCTCATTTAGACTGTGGTACTTATCCAGTTTGGATGTCCCAGTTTTGTaGTCAAGAAATCAAGCTCCT +
Preference number: 4 (lower is better)
Translates to: FVIKKSSSSFRLWYLSSLDVPVL*SRNQAP
Trigger: AGGAGCTTGATTTCTTGATCACAAAACTGGGACATC...CAAACTGGATAAGTACCACAGTCTAAATGAGGAGCTTGATTTCTTGATCACAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442019.6
ENST00000458291.6
CDS-3UTR GCA 90 bp TCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGGTACAAATTGTCTAGTGTaGCATAAGCATCTTCACAAA +
Preference number: 4 (lower is better)
Translates to: SAWIDLASICSNDSSWSGTNCLV*HKHLHK
Trigger: TTTGTGAAGATGCTTATGGCACACTAGACAATTTGT...ACCACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR GCA 90 bp CATCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGACAAATTGTCTAGTGTaGCATAAGCATCTTCACAAA +
Preference number: 4 (lower is better)
Translates to: HLHGLIWLAYVVMTLPGVTNCLV*HKHLHK
Trigger: TTTGTGAAGATGCTTATGGCACACTAGACAATTTGT...CACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR GCA 90 bp CCCAGTTTTGTGATCAAGAAATCAAGCTCCTCATTTAGACTGTGGTACTTATCCCTACCCAGTGAAATTTaGAAACGGTTTCAAATTGTC +
Preference number: 4 (lower is better)
Translates to: PSFVIKKSSSSFRLWYLSLPSEI*KRFQIV
Trigger: GACAATTTGAAACCGTTTGCAAATTTCACTGGGTAG...GGATAAGTACCACAGTCTAAATGAGGAGCTTGATTTCTTGATCACAAAACTGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442019.6
ENST00000458291.6
CDS-3UTR GCA 90 bp CATCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGAAGTTGGTCTGTATTTaGAGAAACACTAGTTTCCAT +
Preference number: 4 (lower is better)
Translates to: HLHGLIWLAYVVMTLPGVKLVCI*RNTSFH
Trigger: ATGGAAACTAGTGTTTCTGCAAATACAGACCAACTT...CACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR GCA 90 bp TCATCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTTGGATTCGCACTTCCTaGTTTCTGTTAGTATGTTTT +
Preference number: 4 (lower is better)
Translates to: SSAWIDLASICSNDSSWSWIRTS*FLLVCF
Trigger: AAAACATACTAACAGAAAGCAGGAAGTGCGAATCCA...ACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR GCA 90 bp TCATCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTAGGCTCTTCAGTTTTTaGAGCATTATATCACTAACC +
Preference number: 4 (lower is better)
Translates to: SSAWIDLASICSNDSSWSRLFSF*SIISLT
Trigger: GGTTAGTGATATAATGCTGCAAAAACTGAAGAGCCT...ACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGATGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000296742.11
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR CCA 90 bp TTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGGTTGACAAAAATTACAGGTTACTACACTaGAGTTCTTGGATTCGCACT +
Preference number: 4 (lower is better)
Translates to: LIWLAYVVMTLPGVVDKNYRLLH*SSWIRT
Trigger: AGTGCGAATCCAAGAACTCCAGTGTAGTAACCTGTA...ATTTTTGTCAACCACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR CCA 90 bp CATCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGTTTCCTTGTCATTCCTaGATTCCTGAAGATGTTTTT +
Preference number: 4 (lower is better)
Translates to: HLHGLIWLAYVVMTLPGVFPCHS*IPEDVF
Trigger: AAAAACATCTTCAGGAATCCAGGAATGACAAGGAAA...CACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR CCA 90 bp TTTGTGATCAAGAAATCAAGCTCCTCATTTAGACTGTGGTACTTATCCAGTTTGAAGAACTCTTGTTCTTaGGCCTCTTTTTCCCGTTTC +
Preference number: 4 (lower is better)
Translates to: FVIKKSSSSFRLWYLSSLKNSCS*ASFSRF
Trigger: GAAACGGGAAAAAGAGGCCCAAGAACAAGAGTTCTT...CAAACTGGATAAGTACCACAGTCTAAATGAGGAGCTTGATTTCTTGATCACAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000442019.6
ENST00000458291.6
CDS-3UTR CCA 90 bp TTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGGTTGACAAAAATAAGAACTCTTGTTCTTaGGCCTCTTTTTCCCGTTTC +
Preference number: 4 (lower is better)
Translates to: LIWLAYVVMTLPGVVDKNKNSCS*ASFSRF
Trigger: GAAACGGGAAAAAGAGGCCCAAGAACAAGAGTTCTT...ATTTTTGTCAACCACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR CCA 90 bp TTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGGTTGACAAAAATCTGGCATCATGGTCATaGACTTCGGATGATTTTCTA +
Preference number: 4 (lower is better)
Translates to: LIWLAYVVMTLPGVVDKNLASWS*TSDDFL
Trigger: TAGAAAATCATCCGAAGTCCATGACCATGATGCCAG...ATTTTTGTCAACCACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR CCA 90 bp ATATATCATCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTAAAGAGCTGGCATCATaGTCATGGACTTCGGATGAT +
Preference number: 4 (lower is better)
Translates to: IYHLHGLIWLAYVVMTLPKELAS*SWTSDD
Trigger: ATCATCCGAAGTCCATGACCATGATGCCAGCTCTTT...AGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGATGATATAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR CCA 90 bp CCCAGTTTTGTGATCAAGAAATCAAGCTCCTCATTTAGACTGTGGTACTTATCCTTCTTTAAAAAGAGCTaGCATCATGGTCATGGACTT +
Preference number: 4 (lower is better)
Translates to: PSFVIKKSSSSFRLWYLSFFKKS*HHGHGL
Trigger: AAGTCCATGACCATGATGCCAGCTCTTTTTAAAGAA...GGATAAGTACCACAGTCTAAATGAGGAGCTTGATTTCTTGATCACAAAACTGGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000442019.6
ENST00000458291.6
CDS-3UTR CCA 90 bp TCATCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTTTCTTTAAAAAGAGCTaGCATCATGGTCATGGACTT +
Preference number: 4 (lower is better)
Translates to: SSAWIDLASICSNDSSWSFFKKS*HHGHGL
Trigger: AAGTCCATGACCATGATGCCAGCTCTTTTTAAAGAA...ACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGATGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR TCA 90 bp TTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGGTTGACAAAAATAATGCTTCTACCCAGTaGAATTTGCAAACGGTTTCA +
Preference number: 4 (lower is better)
Translates to: LIWLAYVVMTLPGVVDKNNASTQ*NLQTVS
Trigger: TGAAACCGTTTGCAAATTTCACTGGGTAGAAGCATT...ATTTTTGTCAACCACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR TCA 90 bp AGTTTTGTGATCAAGAAATCAAGCTCCTCATTTAGACTGTGGTACTTATCCAGTAATGCTTCTACCCAGTaGAATTTGCAAACGGTTTCA +
Preference number: 4 (lower is better)
Translates to: SFVIKKSSSSFRLWYLSSNASTQ*NLQTVS
Trigger: TGAAACCGTTTGCAAATTTCACTGGGTAGAAGCATT...ACTGGATAAGTACCACAGTCTAAATGAGGAGCTTGATTTCTTGATCACAAAACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442019.6
ENST00000458291.6
CDS-3UTR TCA 90 bp TTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGGTTGACAAAAATCATGGTATCCGATTCTaGCATGCTTTCTACTTTTTC +
Preference number: 4 (lower is better)
Translates to: LIWLAYVVMTLPGVVDKNHGIRF*HAFYFF
Trigger: GAAAAAGTAGAAAGCATGTCAGAATCGGATACCATG...ATTTTTGTCAACCACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR TCA 90 bp TTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGGTTGACAAAAATCTTGAGAAAGATTGCTaGCATTCATGGTATCCGATT +
Preference number: 4 (lower is better)
Translates to: LIWLAYVVMTLPGVVDKNLEKDC*HSWYPI
Trigger: AATCGGATACCATGAATGTCAGCAATCTTTCTCAAG...ATTTTTGTCAACCACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR TCA 90 bp TTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGGTTGACAAAAATGAAAGCATTACACCTTaGGAAAGATTGCTGACATTC +
Preference number: 4 (lower is better)
Translates to: LIWLAYVVMTLPGVVDKNESITP*ERLLTF
Trigger: GAATGTCAGCAATCTTTCTCAAGGTGTAATGCTTTC...ATTTTTGTCAACCACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR TCA 90 bp TTTGTGATCAAGAAATCAAGCTCCTCATTTAGACTGTGGTACTTATCCAGTTTGGAAAGCATTACACCTTaGGAAAGATTGCTGACATTC +
Preference number: 4 (lower is better)
Translates to: FVIKKSSSSFRLWYLSSLESITP*ERLLTF
Trigger: GAATGTCAGCAATCTTTCTCAAGGTGTAATGCTTTC...CAAACTGGATAAGTACCACAGTCTAAATGAGGAGCTTGATTTCTTGATCACAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442019.6
ENST00000458291.6
CDS-3UTR GCA 90 bp TCATCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTAAGTTGGTCTGTATTTaGAGAAACACTAGTTTCCAT +
Preference number: 4 (lower is better)
Translates to: SSAWIDLASICSNDSSWSKLVCI*RNTSFH
Trigger: ATGGAAACTAGTGTTTCTGCAAATACAGACCAACTT...ACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGATGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR GCA 90 bp TTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGGTTGACAAAAATTCACTCCTTGCAACCTaGTGTTTAAGTTTTGCATTC +
Preference number: 4 (lower is better)
Translates to: LIWLAYVVMTLPGVVDKNSLLAT*CLSFAF
Trigger: GAATGCAAAACTTAAACAGCAGGTTGCAAGGAGTGA...ATTTTTGTCAACCACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR GCA 90 bp AGTTCTTGGATTCGCACTTCCTGCTTTCTGTTAGTATGTTTTAATTTCTGCAAGTCACTCCTTGCAACCTaGTGTTTAAGTTTTGCATTC +
Preference number: 4 (lower is better)
Translates to: SSWIRTSCFLLVCFNFCKSLLAT*CLSFAF
Trigger: GAATGCAAAACTTAAACAGCAGGTTGCAAGGAGTGA...CTTGCAGAAATTAAAACATACTAACAGAAAGCAGGAAGTGCGAATCCAAGAACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442019.6
CDS-3UTR GCA 90 bp AGTTTTGTGATCAAGAAATCAAGCTCCTCATTTAGACTGTGGTACTTATCCAGTTTGCTCTTCACTCCTTaGAACCTGCTGTTTAAGTTT +
Preference number: 4 (lower is better)
Translates to: SFVIKKSSSSFRLWYLSSLLFTP*NLLFKF
Trigger: AAACTTAAACAGCAGGTTGCAAGGAGTGAAGAGCAA...ACTGGATAAGTACCACAGTCTAAATGAGGAGCTTGATTTCTTGATCACAAAACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442019.6
ENST00000458291.6
CDS-3UTR GCA 90 bp TTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGGTTGACAAAAATAGCTCTTTTTATATCTaGAGGATTCAGCCTCTCTTC +
Preference number: 4 (lower is better)
Translates to: LIWLAYVVMTLPGVVDKNSSFYI*RIQPLF
Trigger: GAAGAGAGGCTGAATCCTGCAGATATAAAAAGAGCT...ATTTTTGTCAACCACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR CCA 90 bp ATATATCATCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTTACAGGTTACTACACTaGAGTTCTTGGATTCGCACT +
Preference number: 4 (lower is better)
Translates to: IYHLHGLIWLAYVVMTLPYRLLH*SSWIRT
Trigger: AGTGCGAATCCAAGAACTCCAGTGTAGTAACCTGTA...AGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGATGATATAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR CCA 90 bp CCCAGTTTTGTGATCAAGAAATCAAGCTCCTCATTTAGACTGTGGTACTTATCCTTTCCTTGTCATTCCTaGATTCCTGAAGATGTTTTT +
Preference number: 4 (lower is better)
Translates to: PSFVIKKSSSSFRLWYLSFPCHS*IPEDVF
Trigger: AAAAACATCTTCAGGAATCCAGGAATGACAAGGAAA...GGATAAGTACCACAGTCTAAATGAGGAGCTTGATTTCTTGATCACAAAACTGGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442019.6
ENST00000458291.6
CDS-3UTR CCA 90 bp ATATATCATCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTAAGAACTCTTGTTCTTaGGCCTCTTTTTCCCGTTTC +
Preference number: 4 (lower is better)
Translates to: IYHLHGLIWLAYVVMTLPKNSCS*ASFSRF
Trigger: GAAACGGGAAAAAGAGGCCCAAGAACAAGAGTTCTT...AGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGATGATATAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR CCA 90 bp TTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGGTTGACAAAAATTCCTCATTTAGACTGTaGTACTTATCCAGTTTGGCT +
Preference number: 4 (lower is better)
Translates to: LIWLAYVVMTLPGVVDKNSSFRL*YLSSLA
Trigger: AGCCAAACTGGATAAGTACCACAGTCTAAATGAGGA...ATTTTTGTCAACCACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR CCA 90 bp ATATATCATCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTCTGGCATCATGGTCATaGACTTCGGATGATTTTCTA +
Preference number: 4 (lower is better)
Translates to: IYHLHGLIWLAYVVMTLPLASWS*TSDDFL
Trigger: TAGAAAATCATCCGAAGTCCATGACCATGATGCCAG...AGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGATGATATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR TCA 90 bp ATATATCATCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTAATGCTTCTACCCAGTaGAATTTGCAAACGGTTTCA +
Preference number: 4 (lower is better)
Translates to: IYHLHGLIWLAYVVMTLPNASTQ*NLQTVS
Trigger: TGAAACCGTTTGCAAATTTCACTGGGTAGAAGCATT...AGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGATGATATAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR TCA 90 bp ATATATCATCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTTCATTCCTGGATTCCTaGAGATGTTTTTGCGTGTTA +
Preference number: 4 (lower is better)
Translates to: IYHLHGLIWLAYVVMTLPSFLDS*RCFCVL
Trigger: TAACACGCAAAAACATCTTCAGGAATCCAGGAATGA...AGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGATGATATAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR TCA 90 bp ATATATCATCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTCCTTCTCACTCTCTTTaGAATGTTCAGCATCAGAAT +
Preference number: 4 (lower is better)
Translates to: IYHLHGLIWLAYVVMTLPPSHSL*NVQHQN
Trigger: ATTCTGATGCTGAACATTTCAAAGAGAGTGAGAAGG...AGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGATGATATAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296742.11
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR TCA 90 bp ATATATCATCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTACAGATTGGAGAATGTaGAAGCATTACACCTTGAGA +
Preference number: 4 (lower is better)
Translates to: IYHLHGLIWLAYVVMTLPTDWRM*KHYTLR
Trigger: TCTCAAGGTGTAATGCTTTCACATTCTCCAATCTGT...AGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGATGATATAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR GCA 90 bp TTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGGTTGACAAAAATCTACCCAGTGAAATTTaGAAACGGTTTCAAATTGTC +
Preference number: 4 (lower is better)
Translates to: LIWLAYVVMTLPGVVDKNLPSEI*KRFQIV
Trigger: GACAATTTGAAACCGTTTGCAAATTTCACTGGGTAG...ATTTTTGTCAACCACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR GCA 90 bp AGTTTTGTGATCAAGAAATCAAGCTCCTCATTTAGACTGTGGTACTTATCCAGTTGGATTCGCACTTCCTaGTTTCTGTTAGTATGTTTT +
Preference number: 4 (lower is better)
Translates to: SFVIKKSSSSFRLWYLSSWIRTS*FLLVCF
Trigger: AAAACATACTAACAGAAAGCAGGAAGTGCGAATCCA...ACTGGATAAGTACCACAGTCTAAATGAGGAGCTTGATTTCTTGATCACAAAACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442019.6
ENST00000458291.6
CDS-3UTR GCA 90 bp TTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGGTTGACAAAAATTGGATTCGCACTTCCTaGTTTCTGTTAGTATGTTTT +
Preference number: 4 (lower is better)
Translates to: LIWLAYVVMTLPGVVDKNWIRTS*FLLVCF
Trigger: AAAACATACTAACAGAAAGCAGGAAGTGCGAATCCA...ATTTTTGTCAACCACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR GCA 90 bp TTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGGTTGACAAAAATCCTCTTCTTCTTTCTTaGTTAAGGTTTTGTCCATCT +
Preference number: 4 (lower is better)
Translates to: LIWLAYVVMTLPGVVDKNPLLLS*LRFCPS
Trigger: AGATGGACAAAACCTTAAGCAAGAAAGAAGAAGAGG...ATTTTTGTCAACCACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR GCA 90 bp AGTTTTGTGATCAAGAAATCAAGCTCCTCATTTAGACTGTGGTACTTATCCAGTCCTCTTCTTCTTTCTTaGTTAAGGTTTTGTCCATCT +
Preference number: 4 (lower is better)
Translates to: SFVIKKSSSSFRLWYLSSPLLLS*LRFCPS
Trigger: AGATGGACAAAACCTTAAGCAAGAAAGAAGAAGAGG...ACTGGATAAGTACCACAGTCTAAATGAGGAGCTTGATTTCTTGATCACAAAACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442019.6
ENST00000458291.6
CDS-3UTR GCA 90 bp ATATATCATCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTTCACTCCTTGCAACCTaGTGTTTAAGTTTTGCATTC +
Preference number: 4 (lower is better)
Translates to: IYHLHGLIWLAYVVMTLPSLLAT*CLSFAF
Trigger: GAATGCAAAACTTAAACAGCAGGTTGCAAGGAGTGA...AGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGATGATATAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR GCA 90 bp ATATATCATCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTTTGCTCTTCACTCCTTaGAACCTGCTGTTTAAGTTT +
Preference number: 4 (lower is better)
Translates to: IYHLHGLIWLAYVVMTLPLLFTP*NLLFKF
Trigger: AAACTTAAACAGCAGGTTGCAAGGAGTGAAGAGCAA...AGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGATGATATAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR CCA 90 bp TTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGGTTGACAAAAATGATATTGCAAGCCTTTaGTCAGCACATTCAATGATT +
Preference number: 4 (lower is better)
Translates to: LIWLAYVVMTLPGVVDKNDIASL*SAHSMI
Trigger: AATCATTGAATGTGCTGACCAAAGGCTTGCAATATC...ATTTTTGTCAACCACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR CCA 90 bp TTTGTGATCAAGAAATCAAGCTCCTCATTTAGACTGTGGTACTTATCCAGTTTGGATATTGCAAGCCTTTaGTCAGCACATTCAATGATT +
Preference number: 4 (lower is better)
Translates to: FVIKKSSSSFRLWYLSSLDIASL*SAHSMI
Trigger: AATCATTGAATGTGCTGACCAAAGGCTTGCAATATC...CAAACTGGATAAGTACCACAGTCTAAATGAGGAGCTTGATTTCTTGATCACAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442019.6
ENST00000458291.6
CDS-3UTR CCA 90 bp TTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGGTTGACAAAAATTTCTTTAAAAAGAGCTaGCATCATGGTCATGGACTT +
Preference number: 4 (lower is better)
Translates to: LIWLAYVVMTLPGVVDKNFFKKS*HHGHGL
Trigger: AAGTCCATGACCATGATGCCAGCTCTTTTTAAAGAA...ATTTTTGTCAACCACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR CCA 90 bp AGTTCTTGGATTCGCACTTCCTGCTTTCTGTTAGTATGTTTTAATTTCTGCAAGTTCTTTAAAAAGAGCTaGCATCATGGTCATGGACTT +
Preference number: 4 (lower is better)
Translates to: SSWIRTSCFLLVCFNFCKFFKKS*HHGHGL
Trigger: AAGTCCATGACCATGATGCCAGCTCTTTTTAAAGAA...CTTGCAGAAATTAAAACATACTAACAGAAAGCAGGAAGTGCGAATCCAAGAACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000442019.6
CDS-3UTR GCA 90 bp TTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGGTTGACAAAAATACAAATTGTCTAGTGTaGCATAAGCATCTTCACAAA +
Preference number: 4 (lower is better)
Translates to: LIWLAYVVMTLPGVVDKNTNCLV*HKHLHK
Trigger: TTTGTGAAGATGCTTATGGCACACTAGACAATTTGT...ATTTTTGTCAACCACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR GCA 90 bp TTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGGTTGACAAAAATAAGTTGGTCTGTATTTaGAGAAACACTAGTTTCCAT +
Preference number: 4 (lower is better)
Translates to: LIWLAYVVMTLPGVVDKNKLVCI*RNTSFH
Trigger: ATGGAAACTAGTGTTTCTGCAAATACAGACCAACTT...ATTTTTGTCAACCACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR GCA 90 bp ATATATCATCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTTGGATTCGCACTTCCTaGTTTCTGTTAGTATGTTTT +
Preference number: 4 (lower is better)
Translates to: IYHLHGLIWLAYVVMTLPWIRTS*FLLVCF
Trigger: AAAACATACTAACAGAAAGCAGGAAGTGCGAATCCA...AGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGATGATATAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR CCA 90 bp ATATATCATCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTTACTCGTTACCAAGTTaGTCTGTATTTGCAGAAACA +
Preference number: 4 (lower is better)
Translates to: IYHLHGLIWLAYVVMTLPYSLPS*SVFAET
Trigger: TGTTTCTGCAAATACAGACCAACTTGGTAACGAGTA...AGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGATGATATAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR CCA 90 bp TTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGGTTGACAAAAATTTTCCTTGTCATTCCTaGATTCCTGAAGATGTTTTT +
Preference number: 4 (lower is better)
Translates to: LIWLAYVVMTLPGVVDKNFPCHS*IPEDVF
Trigger: AAAAACATCTTCAGGAATCCAGGAATGACAAGGAAA...ATTTTTGTCAACCACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR CCA 90 bp ATATATCATCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTCTGCATGGATTGATTTaGCTAGCATATGTAGTAATG +
Preference number: 4 (lower is better)
Translates to: IYHLHGLIWLAYVVMTLPLHGLI*LAYVVM
Trigger: CATTACTACATATGCTAGCCAAATCAATCCATGCAG...AGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGATGATATAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR GCA 90 bp ATATATCATCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTAAGTTGGTCTGTATTTaGAGAAACACTAGTTTCCAT +
Preference number: 4 (lower is better)
Translates to: IYHLHGLIWLAYVVMTLPKLVCI*RNTSFH
Trigger: ATGGAAACTAGTGTTTCTGCAAATACAGACCAACTT...AGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGATGATATAT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS TCA 90 bp CACAAACTCGCAATCGGGCTCCCGGAGTGCTGGAACGCCCCTGTGTaGCGTCCGCCCGCGCCGGGGGAACTCCGCAGAGACAGGTGCAGC +
Preference number: 5 (lower is better)
Translates to: HKLAIGLPECWNAPV*RPPAPGELRRDRCS
Trigger: GCTGCACCTGTCTCTGCGGAGTTCCCCCGGCGCGGGCGGACGTCACACAGGGGCGTTCCAGCACTCCGGGAGCCCGATTGCGAGTTTGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296742.11
ENST00000502583.6
CDS TCA 90 bp CGGCCAGCACGGGCCTCGCCGTGCCGGCTACTCAACACGCCTTCCTaGGAGCACAGAACATCCACAGCCCTATACAGCGCGCCATCCAGA +
Preference number: 5 (lower is better)
Translates to: RPARASPCRLLNTPS*EHRTSTALYSAPSR
Trigger: TCTGGATGGCGCGCTGTATAGGGCTGTGGATGTTCTGTGCTCTCAGGAAGGCGTGTTGAGTAGCCGGCACGGCGAGGCCCGTGCTGGCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502583.6
CDS GCA 90 bp CAGAGACAGGTGCAGCCCGCGAGGCCCGAGCGACCCTACTGTGGGTaGGGTGTCTTCCCAGAGAGTGGTGAAGTTAGGAAGGTACGACCC +
Preference number: 5 (lower is better)
Translates to: QRQVQPARPERPYCG*GVFPESGEVRKVRP
Trigger: GGGTCGTACCTTCCTAACTTCACCACTCTCTGGGAAGACACCGCACCCACAGTAGGGTCGCTCGGGCCTCGCGGGCTGCACCTGTCTCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296742.11
ENST00000502583.6
CDS-3UTR CAA 90 bp ATCCAGTTTGGCTCCCAGAAGGGTAGGTACATCTCTGATACTCTTGGCTTCATCCCTCTGCACCGGGTTTaGTGGGAGGGAGAACGCTTT +
Preference number: 5 (lower is better)
Translates to: IQFGSQKGRYISDTLGFIPLHRV*WEGERF
Trigger: AAAGCGTTCTCCCTCCCACAAAACCCGGTGCAGAGG...GATGAAGCCAAGAGTATCAGAGATGTACCTACCCTTCTGGGAGCCAAACTGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442019.6
ENST00000458291.6
CDS-3UTR CAA 90 bp AAATCAAGCTCCTCATTTAGACTGTGGTACTTATCCAGTTTGGCTCCCAGAAGGGGAGGTTGGCTAGGGTaGAGGGCAGATTCCTTGGCA +
Preference number: 5 (lower is better)
Translates to: KSSSSFRLWYLSSLAPRRGGWLG*RADSLA
Trigger: TGCCAAGGAATCTGCCCTCAACCCTAGCCAACCTCC...CCTTCTGGGAGCCAAACTGGATAAGTACCACAGTCTAAATGAGGAGCTTGATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442019.6
ENST00000458291.6
CDS-3UTR CAA 90 bp TCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGGTGGAGGTTGGCTAGGGTaGAGGGCAGATTCCTTGGCA +
Preference number: 5 (lower is better)
Translates to: SAWIDLASICSNDSSWSGGGWLG*RADSLA
Trigger: TGCCAAGGAATCTGCCCTCAACCCTAGCCAACCTCC...ACCACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR CAA 90 bp GTGGTACTTATCCAGTTTGGCTCCCAGAAGGGTAGGTACATCTCTGATACTCTTTCTGGGAGTGGGATATaGCAAGCCTTTGGTCAGCAC +
Preference number: 5 (lower is better)
Translates to: VVLIQFGSQKGRYISDTLSGSGI*QAFGQH
Trigger: GTGCTGACCAAAGGCTTGCAATATCCCACTCCCAGA...AAGAGTATCAGAGATGTACCTACCCTTCTGGGAGCCAAACTGGATAAGTACCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442019.6
ENST00000458291.6
CDS-3UTR CAA 90 bp TCATCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTCCTCTGCACCGGGTTTaGTGGGAGGGAGAACGCTTT +
Preference number: 5 (lower is better)
Translates to: SSAWIDLASICSNDSSWSPLHRV*WEGERF
Trigger: AAAGCGTTCTCCCTCCCACAAAACCCGGTGCAGAGG...ACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR CAA 90 bp CTTATCCAGTTTGGCTCCCAGAAGGGTAGGTACATCTCTGATACTCTTGGCTTCACTACACTGGAGTTCTaGGATTCGCACTTCCTGCTT +
Preference number: 5 (lower is better)
Translates to: LIQFGSQKGRYISDTLGFTTLEF*DSHFLL
Trigger: AAGCAGGAAGTGCGAATCCAAGAACTCCAGTGTAGT...GAAGCCAAGAGTATCAGAGATGTACCTACCCTTCTGGGAGCCAAACTGGATAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442019.6
ENST00000458291.6
CDS-3UTR CAA 90 bp CAGGTTACTACACTGGAGTTCTTGGATTCGCACTTCCTGCTTTCTGTTAGTATGTCTGGGAGTGGGATATaGCAAGCCTTTGGTCAGCAC +
Preference number: 5 (lower is better)
Translates to: QVTTLEFLDSHFLLSVSMSGSGI*QAFGQH
Trigger: GTGCTGACCAAAGGCTTGCAATATCCCACTCCCAGA...CATACTAACAGAAAGCAGGAAGTGCGAATCCAAGAACTCCAGTGTAGTAACCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442019.6
CDS CCA 90 bp TTAGCCAGTGACTTTTCTGTAAATTTCAGCATCTCTCCACTGCAGTaGATTAGAGGCGGGCTTCTAGGAGGAGGCTGTCTAAAATACTCG +
Preference number: 5 (lower is better)
Translates to: LASDFSVNFSISPLQ*IRGGLLGGGCLKYS
Trigger: CGAGTATTTTAGACAGCCTCCTCCTAGAAGCCCGCCTCTAATCCACTGCAGTGGAGAGATGCTGAAATTTACAGAAAAGTCACTGGCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000296742.11
ENST00000338150.8
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
ENST00000512086.5
ENST00000512691.1
CDS-3UTR CAA 90 bp CTTATCCAGTTTGGCTCCCAGAAGGGTAGGTACATCTCTGATACTCTTGGCTTCTTGAGGGCAGATTCCTaGGCAATACTTTTAGCCAGT +
Preference number: 5 (lower is better)
Translates to: LIQFGSQKGRYISDTLGFLRADS*AILLAS
Trigger: ACTGGCTAAAAGTATTGCCAAGGAATCTGCCCTCAA...GAAGCCAAGAGTATCAGAGATGTACCTACCCTTCTGGGAGCCAAACTGGATAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442019.6
ENST00000458291.6
CDS-3UTR CAA 90 bp CTTATCCAGTTTGGCTCCCAGAAGGGTAGGTACATCTCTGATACTCTTGGCTTCTGTTCAGCATCAGAATaGATGATGTCCTGGCATGTG +
Preference number: 5 (lower is better)
Translates to: LIQFGSQKGRYISDTLGFCSASE*MMSWHV
Trigger: CACATGCCAGGACATCATCAATTCTGATGCTGAACA...GAAGCCAAGAGTATCAGAGATGTACCTACCCTTCTGGGAGCCAAACTGGATAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442019.6
ENST00000458291.6
CDS-3UTR CAA 90 bp CATCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGTCTGGGAGTGGGATATaGCAAGCCTTTGGTCAGCAC +
Preference number: 5 (lower is better)
Translates to: HLHGLIWLAYVVMTLPGVSGSGI*QAFGQH
Trigger: GTGCTGACCAAAGGCTTGCAATATCCCACTCCCAGA...CACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR CAA 90 bp ATCAGAATTGATGATGTCCTGGCATGTGAGAAGTCCCACCATCAGAGCCAGAAGTGCAGTGGTTTTCTTTaGACTCTAGGAGATGTCCCA +
Preference number: 5 (lower is better)
Translates to: IRIDDVLACEKSHHQSQKCSGFL*TLGDVP
Trigger: TGGGACATCTCCTAGAGTCAAAAGAAAACCACTGCA...CTTCTGGCTCTGATGGTGGGACTTCTCACATGCCAGGACATCATCAATTCTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442019.6
CDS-3UTR CAA 90 bp CTTATCCAGTTTGGCTCCCAGAAGGGTAGGTACATCTCTGATACTCTTGGCTTCTGCAGTGGTTTTCTTTaGACTCTAGGAGATGTCCCA +
Preference number: 5 (lower is better)
Translates to: LIQFGSQKGRYISDTLGFCSGFL*TLGDVP
Trigger: TGGGACATCTCCTAGAGTCAAAAGAAAACCACTGCA...GAAGCCAAGAGTATCAGAGATGTACCTACCCTTCTGGGAGCCAAACTGGATAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442019.6
ENST00000458291.6
CDS-3UTR CAA 90 bp TTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGGTTGACAAAAATCCTCTGCACCGGGTTTaGTGGGAGGGAGAACGCTTT +
Preference number: 5 (lower is better)
Translates to: LIWLAYVVMTLPGVVDKNPLHRV*WEGERF
Trigger: AAAGCGTTCTCCCTCCCACAAAACCCGGTGCAGAGG...ATTTTTGTCAACCACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR CAA 90 bp TTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGGTTGACAAAAATGGAGGTTGGCTAGGGTaGAGGGCAGATTCCTTGGCA +
Preference number: 5 (lower is better)
Translates to: LIWLAYVVMTLPGVVDKNGGWLG*RADSLA
Trigger: TGCCAAGGAATCTGCCCTCAACCCTAGCCAACCTCC...ATTTTTGTCAACCACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR CAA 90 bp TTTGTGATCAAGAAATCAAGCTCCTCATTTAGACTGTGGTACTTATCCAGTTTGGGAGGTTGGCTAGGGTaGAGGGCAGATTCCTTGGCA +
Preference number: 5 (lower is better)
Translates to: FVIKKSSSSFRLWYLSSLGGWLG*RADSLA
Trigger: TGCCAAGGAATCTGCCCTCAACCCTAGCCAACCTCC...CAAACTGGATAAGTACCACAGTCTAAATGAGGAGCTTGATTTCTTGATCACAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442019.6
ENST00000458291.6
CDS-3UTR CAA 90 bp CATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGGTTGACCTGCCGAAGACCAAGTaGAGACAATTTCTGGCCTCT +
Preference number: 5 (lower is better)
Translates to: HGLIWLAYVVMTLPGVVDLPKTK*RQFLAS
Trigger: AGAGGCCAGAAATTGTCTCAACTTGGTCTTCGGCAG...GTCAACCACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR CAA 90 bp TCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGGTCTGCCGAAGACCAAGTaGAGACAATTTCTGGCCTCT +
Preference number: 5 (lower is better)
Translates to: SAWIDLASICSNDSSWSGLPKTK*RQFLAS
Trigger: AGAGGCCAGAAATTGTCTCAACTTGGTCTTCGGCAG...ACCACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS CCA 90 bp GGCGGGCTTCTAGGAGGAGGCTGTCTAAAATACTCGTTACCAAGTTaGTCTGTATTTGCAGAAACACTAGTTTCCATTGGATTTTCTTCC +
Preference number: 5 (lower is better)
Translates to: GGLLGGGCLKYSLPS*SVFAETLVSIGFSS
Trigger: GGAAGAAAATCCAATGGAAACTAGTGTTTCTGCAAATACAGACCAACTTGGTAACGAGTATTTTAGACAGCCTCCTCCTAGAAGCCCGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000296742.11
ENST00000338150.8
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
ENST00000512086.5
ENST00000512691.1
CDS-3UTR CAA 90 bp ATATATCATCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTCCTCTGCACCGGGTTTaGTGGGAGGGAGAACGCTTT +
Preference number: 5 (lower is better)
Translates to: IYHLHGLIWLAYVVMTLPPLHRV*WEGERF
Trigger: AAAGCGTTCTCCCTCCCACAAAACCCGGTGCAGAGG...AGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGATGATATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR CAA 90 bp TCATCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTCTGCCGAAGACCAAGTaGAGACAATTTCTGGCCTCT +
Preference number: 5 (lower is better)
Translates to: SSAWIDLASICSNDSSWSLPKTK*RQFLAS
Trigger: AGAGGCCAGAAATTGTCTCAACTTGGTCTTCGGCAG...ACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR CAA 90 bp CATCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGACTACACTGGAGTTCTaGGATTCGCACTTCCTGCTT +
Preference number: 5 (lower is better)
Translates to: HLHGLIWLAYVVMTLPGVTTLEF*DSHFLL
Trigger: AAGCAGGAAGTGCGAATCCAAGAACTCCAGTGTAGT...CACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR CAA 90 bp AAATCAAGCTCCTCATTTAGACTGTGGTACTTATCCAGTTTGGCTCCCAGAAGGCAAGAACTCTTGTTCTaGGGCCTCTTTTTCCCGTTT +
Preference number: 5 (lower is better)
Translates to: KSSSSFRLWYLSSLAPRRQELLF*GLFFPF
Trigger: AAACGGGAAAAAGAGGCCCAAGAACAAGAGTTCTTG...CCTTCTGGGAGCCAAACTGGATAAGTACCACAGTCTAAATGAGGAGCTTGATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000442019.6
ENST00000458291.6
CDS-3UTR CAA 90 bp AAATCAAGCTCCTCATTTAGACTGTGGTACTTATCCAGTTTGGCTCCCAGAAGGTGTTCAGCATCAGAATaGATGATGTCCTGGCATGTG +
Preference number: 5 (lower is better)
Translates to: KSSSSFRLWYLSSLAPRRCSASE*MMSWHV
Trigger: CACATGCCAGGACATCATCAATTCTGATGCTGAACA...CCTTCTGGGAGCCAAACTGGATAAGTACCACAGTCTAAATGAGGAGCTTGATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442019.6
ENST00000458291.6
CDS-3UTR CAA 90 bp CTTATCCAGTTTGGCTCCCAGAAGGGTAGGTACATCTCTGATACTCTTGGCTTCGAGGCTCTTCAGTTTTaGCAGCATTATATCACTAAC +
Preference number: 5 (lower is better)
Translates to: LIQFGSQKGRYISDTLGFEALQF*QHYITN
Trigger: GTTAGTGATATAATGCTGCAAAAACTGAAGAGCCTC...GAAGCCAAGAGTATCAGAGATGTACCTACCCTTCTGGGAGCCAAACTGGATAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442019.6
ENST00000458291.6
CDS-3UTR CAA 90 bp GTGGTACTTATCCAGTTTGGCTCCCAGAAGGGTAGGTACATCTCTGATACTCTTGGATATTGCAAGCCTTaGGTCAGCACATTCAATGAT +
Preference number: 5 (lower is better)
Translates to: VVLIQFGSQKGRYISDTLGYCKP*VSTFND
Trigger: ATCATTGAATGTGCTGACCAAAGGCTTGCAATATCC...AAGAGTATCAGAGATGTACCTACCCTTCTGGGAGCCAAACTGGATAAGTACCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442019.6
ENST00000458291.6
CDS-3UTR CAA 90 bp ATCCAGTTTGGCTCCCAGAAGGGTAGGTACATCTCTGATACTCTTGGCTTCATCCTCTTCCTGGAGTGGTaGACAAAAATGATTACTGTT +
Preference number: 5 (lower is better)
Translates to: IQFGSQKGRYISDTLGFILFLEW*TKMITV
Trigger: AACAGTAATCATTTTTGTCAACCACTCCAGGAAGAG...GATGAAGCCAAGAGTATCAGAGATGTACCTACCCTTCTGGGAGCCAAACTGGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000442019.6
ENST00000458291.6
CDS TCA 90 bp CAAGTCACAAGTGGTGCCGGTGGTTTCCATACAGATTGGAGAATGTaGAAGCATTACACCTTGAGAAAGATTGCTGACATTCATGGTATC +
Preference number: 5 (lower is better)
Translates to: QVTSGAGGFHTDWRM*KHYTLRKIADIHGI
Trigger: GATACCATGAATGTCAGCAATCTTTCTCAAGGTGTAATGCTTTCACATTCTCCAATCTGTATGGAAACCACCGGCACCACTTGTGACTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338150.8
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
ENST00000509324.1
ENST00000512086.5
ENST00000512691.1
CDS-3UTR CAA 90 bp TTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGGTTGACAAAAATAGGATCCATAGTTTCTaGGACCCACGCTACGGACCT +
Preference number: 5 (lower is better)
Translates to: LIWLAYVVMTLPGVVDKNRIHSF*DPRYGP
Trigger: AGGTCCGTAGCGTGGGTCCAAGAAACTATGGATCCT...ATTTTTGTCAACCACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR CAA 90 bp CATCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGTTGAGGGCAGATTCCTaGGCAATACTTTTAGCCAGT +
Preference number: 5 (lower is better)
Translates to: HLHGLIWLAYVVMTLPGVLRADS*AILLAS
Trigger: ACTGGCTAAAAGTATTGCCAAGGAATCTGCCCTCAA...CACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR CAA 90 bp CATCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGCAAGAACTCTTGTTCTaGGGCCTCTTTTTCCCGTTT +
Preference number: 5 (lower is better)
Translates to: HLHGLIWLAYVVMTLPGVQELLF*GLFFPF
Trigger: AAACGGGAAAAAGAGGCCCAAGAACAAGAGTTCTTG...CACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR CAA 90 bp CATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGGTTGACTGTTCAGCATCAGAATaGATGATGTCCTGGCATGTG +
Preference number: 5 (lower is better)
Translates to: HGLIWLAYVVMTLPGVVDCSASE*MMSWHV
Trigger: CACATGCCAGGACATCATCAATTCTGATGCTGAACA...GTCAACCACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR CAA 90 bp TCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGGTTGTTCAGCATCAGAATaGATGATGTCCTGGCATGTG +
Preference number: 5 (lower is better)
Translates to: SAWIDLASICSNDSSWSGCSASE*MMSWHV
Trigger: CACATGCCAGGACATCATCAATTCTGATGCTGAACA...ACCACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR CAA 90 bp GTGGTACTTATCCAGTTTGGCTCCCAGAAGGGTAGGTACATCTCTGATACTCTTACCTTCTCACTCTCTTaGAAATGTTCAGCATCAGAA +
Preference number: 5 (lower is better)
Translates to: VVLIQFGSQKGRYISDTLTFSLS*KCSASE
Trigger: TTCTGATGCTGAACATTTCAAAGAGAGTGAGAAGGT...AAGAGTATCAGAGATGTACCTACCCTTCTGGGAGCCAAACTGGATAAGTACCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442019.6
ENST00000458291.6
CDS-3UTR CAA 90 bp AAATCAAGCTCCTCATTTAGACTGTGGTACTTATCCAGTTTGGCTCCCAGAAGGGGATATTGCAAGCCTTaGGTCAGCACATTCAATGAT +
Preference number: 5 (lower is better)
Translates to: KSSSSFRLWYLSSLAPRRGYCKP*VSTFND
Trigger: ATCATTGAATGTGCTGACCAAAGGCTTGCAATATCC...CCTTCTGGGAGCCAAACTGGATAAGTACCACAGTCTAAATGAGGAGCTTGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442019.6
ENST00000458291.6
CDS-3UTR CAA 90 bp CTTATCCAGTTTGGCTCCCAGAAGGGTAGGTACATCTCTGATACTCTTGGCTTCTGGTTTCCATACAGATaGGAGAATGTGAAAGCATTA +
Preference number: 5 (lower is better)
Translates to: LIQFGSQKGRYISDTLGFWFPYR*ENVKAL
Trigger: TAATGCTTTCACATTCTCCAATCTGTATGGAAACCA...GAAGCCAAGAGTATCAGAGATGTACCTACCCTTCTGGGAGCCAAACTGGATAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442019.6
ENST00000458291.6
CDS-3UTR CAA 90 bp ATCCAGTTTGGCTCCCAGAAGGGTAGGTACATCTCTGATACTCTTGGCTTCATCTGGTTTCCATACAGATaGGAGAATGTGAAAGCATTA +
Preference number: 5 (lower is better)
Translates to: IQFGSQKGRYISDTLGFIWFPYR*ENVKAL
Trigger: TAATGCTTTCACATTCTCCAATCTGTATGGAAACCA...GATGAAGCCAAGAGTATCAGAGATGTACCTACCCTTCTGGGAGCCAAACTGGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442019.6
ENST00000458291.6
CDS-3UTR CAA 90 bp CATCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGTGCAGTGGTTTTCTTTaGACTCTAGGAGATGTCCCA +
Preference number: 5 (lower is better)
Translates to: HLHGLIWLAYVVMTLPGVCSGFL*TLGDVP
Trigger: TGGGACATCTCCTAGAGTCAAAAGAAAACCACTGCA...CACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR CAA 90 bp TCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGGTTGCAGTGGTTTTCTTTaGACTCTAGGAGATGTCCCA +
Preference number: 5 (lower is better)
Translates to: SAWIDLASICSNDSSWSGCSGFL*TLGDVP
Trigger: TGGGACATCTCCTAGAGTCAAAAGAAAACCACTGCA...ACCACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS CCA 90 bp CAAAATTCTTTATTTCGTTCTGAGGCAAGTCACAAGTGGTGCCGGTaGTTTCCATACAGATTGGAGAATGTGAAAGCATTACACCTTGAG +
Preference number: 5 (lower is better)
Translates to: QNSLFRSEASHKWCR*FPYRLENVKALHLE
Trigger: CTCAAGGTGTAATGCTTTCACATTCTCCAATCTGTATGGAAACCACCGGCACCACTTGTGACTTGCCTCAGAACGAAATAAAGAATTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338150.8
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
ENST00000509324.1
ENST00000512086.5
ENST00000512691.1
CDS-3UTR CAA 90 bp AAATCAAGCTCCTCATTTAGACTGTGGTACTTATCCAGTTTGGCTCCCAGAAGGATACTCGTTACCAAGTaGGTCTGTATTTGCAGAAAC +
Preference number: 5 (lower is better)
Translates to: KSSSSFRLWYLSSLAPRRILVTK*VCICRN
Trigger: GTTTCTGCAAATACAGACCAACTTGGTAACGAGTAT...CCTTCTGGGAGCCAAACTGGATAAGTACCACAGTCTAAATGAGGAGCTTGATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442019.6
ENST00000458291.6
CDS-3UTR CAA 90 bp TCATCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTTTGAGGGCAGATTCCTaGGCAATACTTTTAGCCAGT +
Preference number: 5 (lower is better)
Translates to: SSAWIDLASICSNDSSWSLRADS*AILLAS
Trigger: ACTGGCTAAAAGTATTGCCAAGGAATCTGCCCTCAA...ACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR CAA 90 bp TCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGGTACATCTCTGATACTCTaGGCTTCATCTGAATCACAG +
Preference number: 5 (lower is better)
Translates to: SAWIDLASICSNDSSWSGTSLIL*ASSESQ
Trigger: CTGTGATTCAGATGAAGCCAAGAGTATCAGAGATGT...ACCACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR CAA 90 bp CATCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGACATCTCTGATACTCTaGGCTTCATCTGAATCACAG +
Preference number: 5 (lower is better)
Translates to: HLHGLIWLAYVVMTLPGVTSLIL*ASSESQ
Trigger: CTGTGATTCAGATGAAGCCAAGAGTATCAGAGATGT...CACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR CAA 90 bp CATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGGTTGACGGATATTGCAAGCCTTaGGTCAGCACATTCAATGAT +
Preference number: 5 (lower is better)
Translates to: HGLIWLAYVVMTLPGVVDGYCKP*VSTFND
Trigger: ATCATTGAATGTGCTGACCAAAGGCTTGCAATATCC...GTCAACCACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR CAA 90 bp TCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGGTGGATATTGCAAGCCTTaGGTCAGCACATTCAATGAT +
Preference number: 5 (lower is better)
Translates to: SAWIDLASICSNDSSWSGGYCKP*VSTFND
Trigger: ATCATTGAATGTGCTGACCAAAGGCTTGCAATATCC...ACCACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR CAA 90 bp ATATATCATCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTTCTGGGAGTGGGATATaGCAAGCCTTTGGTCAGCAC +
Preference number: 5 (lower is better)
Translates to: IYHLHGLIWLAYVVMTLPSGSGI*QAFGQH
Trigger: GTGCTGACCAAAGGCTTGCAATATCCCACTCCCAGA...AGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGATGATATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR CAA 90 bp GTGGTACTTATCCAGTTTGGCTCCCAGAAGGGTAGGTACATCTCTGATACTCTTTATCATCTGCATGGATaGATTTGGCTAGCATATGTA +
Preference number: 5 (lower is better)
Translates to: VVLIQFGSQKGRYISDTLYHLHG*IWLAYV
Trigger: TACATATGCTAGCCAAATCAATCCATGCAGATGATA...AAGAGTATCAGAGATGTACCTACCCTTCTGGGAGCCAAACTGGATAAGTACCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442019.6
ENST00000458291.6
CDS-3UTR CAA 90 bp CATCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGATACTCGTTACCAAGTaGGTCTGTATTTGCAGAAAC +
Preference number: 5 (lower is better)
Translates to: HLHGLIWLAYVVMTLPGVILVTK*VCICRN
Trigger: GTTTCTGCAAATACAGACCAACTTGGTAACGAGTAT...CACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR CAA 90 bp TTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGGTTGACAAAAATACTACACTGGAGTTCTaGGATTCGCACTTCCTGCTT +
Preference number: 5 (lower is better)
Translates to: LIWLAYVVMTLPGVVDKNTTLEF*DSHFLL
Trigger: AAGCAGGAAGTGCGAATCCAAGAACTCCAGTGTAGT...ATTTTTGTCAACCACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR CAA 90 bp TTTGTGATCAAGAAATCAAGCTCCTCATTTAGACTGTGGTACTTATCCAGTTTGACTACACTGGAGTTCTaGGATTCGCACTTCCTGCTT +
Preference number: 5 (lower is better)
Translates to: FVIKKSSSSFRLWYLSSLTTLEF*DSHFLL
Trigger: AAGCAGGAAGTGCGAATCCAAGAACTCCAGTGTAGT...CAAACTGGATAAGTACCACAGTCTAAATGAGGAGCTTGATTTCTTGATCACAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442019.6
ENST00000458291.6
CDS-3UTR CAA 90 bp CATCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGACCTCTTCTTCTTTCTaGCTTAAGGTTTTGTCCATC +
Preference number: 5 (lower is better)
Translates to: HLHGLIWLAYVVMTLPGVTSSSF*LKVLSI
Trigger: GATGGACAAAACCTTAAGCAAGAAAGAAGAAGAGGT...CACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR CAA 90 bp TCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGGTACCTTCTCACTCTCTTaGAAATGTTCAGCATCAGAA +
Preference number: 5 (lower is better)
Translates to: SAWIDLASICSNDSSWSGTFSLS*KCSASE
Trigger: TTCTGATGCTGAACATTTCAAAGAGAGTGAGAAGGT...ACCACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296742.11
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR CAA 90 bp CATCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGGAGGCTCTTCAGTTTTaGCAGCATTATATCACTAAC +
Preference number: 5 (lower is better)
Translates to: HLHGLIWLAYVVMTLPGVEALQF*QHYITN
Trigger: GTTAGTGATATAATGCTGCAAAAACTGAAGAGCCTC...CACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296742.11
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR CAA 90 bp TCATCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTACATCTCTGATACTCTaGGCTTCATCTGAATCACAG +
Preference number: 5 (lower is better)
Translates to: SSAWIDLASICSNDSSWSTSLIL*ASSESQ
Trigger: CTGTGATTCAGATGAAGCCAAGAGTATCAGAGATGT...ACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGATGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR CAA 90 bp AAATCAAGCTCCTCATTTAGACTGTGGTACTTATCCAGTTTGGCTCCCAGAAGGTATCATCTGCATGGATaGATTTGGCTAGCATATGTA +
Preference number: 5 (lower is better)
Translates to: KSSSSFRLWYLSSLAPRRYHLHG*IWLAYV
Trigger: TACATATGCTAGCCAAATCAATCCATGCAGATGATA...CCTTCTGGGAGCCAAACTGGATAAGTACCACAGTCTAAATGAGGAGCTTGATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442019.6
ENST00000458291.6
CDS-3UTR CAA 90 bp CATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGGTTGACAGCTTCTCACTCTCTTaGAAATGTTCAGCATCAGAA +
Preference number: 5 (lower is better)
Translates to: HGLIWLAYVVMTLPGVVDSFSLS*KCSASE
Trigger: TTCTGATGCTGAACATTTCAAAGAGAGTGAGAAGCT...GTCAACCACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379918.8
CDS-3UTR CAA 90 bp TCATCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTATACTCGTTACCAAGTaGGTCTGTATTTGCAGAAAC +
Preference number: 5 (lower is better)
Translates to: SSAWIDLASICSNDSSWSILVTK*VCICRN
Trigger: GTTTCTGCAAATACAGACCAACTTGGTAACGAGTAT...ACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGATGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR CAA 90 bp ATATATCATCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTACTACACTGGAGTTCTaGGATTCGCACTTCCTGCTT +
Preference number: 5 (lower is better)
Translates to: IYHLHGLIWLAYVVMTLPTTLEF*DSHFLL
Trigger: AAGCAGGAAGTGCGAATCCAAGAACTCCAGTGTAGT...AGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGATGATATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR CAA 90 bp CATCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGATGAACACTTGCTGTTaGGTAATCTTCATCTGTAGT +
Preference number: 5 (lower is better)
Translates to: HLHGLIWLAYVVMTLPGVMNTCC*VIFICS
Trigger: ACTACAGATGAAGATTACCAAACAGCAAGTGTTCAT...CACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR CAA 90 bp TCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGGTATGAACACTTGCTGTTaGGTAATCTTCATCTGTAGT +
Preference number: 5 (lower is better)
Translates to: SAWIDLASICSNDSSWSGMNTCC*VIFICS
Trigger: ACTACAGATGAAGATTACCAAACAGCAAGTGTTCAT...ACCACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR CAA 90 bp CATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGGTTGACGACATCAATGAACACTaGCTGTTTGGTAATCTTCAT +
Preference number: 5 (lower is better)
Translates to: HGLIWLAYVVMTLPGVVDDINEH*LFGNLH
Trigger: ATGAAGATTACCAAACAGCAAGTGTTCATTGATGTC...GTCAACCACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR CAA 90 bp TCATCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTACCTCTTCTTCTTTCTaGCTTAAGGTTTTGTCCATC +
Preference number: 5 (lower is better)
Translates to: SSAWIDLASICSNDSSWSTSSSF*LKVLSI
Trigger: GATGGACAAAACCTTAAGCAAGAAAGAAGAAGAGGT...ACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR CAA 90 bp CATCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGGTCGTTTTTGTATCCTaGGTAATATCTGACTTCAAG +
Preference number: 5 (lower is better)
Translates to: HLHGLIWLAYVVMTLPGVVVFVS*VISDFK
Trigger: CTTGAAGTCAGATATTACCAAGGATACAAAAACGAC...CACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR CAA 90 bp TCATCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTACCTTCTCACTCTCTTaGAAATGTTCAGCATCAGAA +
Preference number: 5 (lower is better)
Translates to: SSAWIDLASICSNDSSWSTFSLS*KCSASE
Trigger: TTCTGATGCTGAACATTTCAAAGAGAGTGAGAAGGT...ACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGATGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296742.11
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR CAA 90 bp TCATCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGAGGCTCTTCAGTTTTaGCAGCATTATATCACTAAC +
Preference number: 5 (lower is better)
Translates to: SSAWIDLASICSNDSSWSEALQF*QHYITN
Trigger: GTTAGTGATATAATGCTGCAAAAACTGAAGAGCCTC...ACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296742.11
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR CAA 90 bp TCATCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTCTCTTCCTGGAGTGGTaGACAAAAATGATTACTGTT +
Preference number: 5 (lower is better)
Translates to: SSAWIDLASICSNDSSWSLFLEW*TKMITV
Trigger: AACAGTAATCATTTTTGTCAACCACTCCAGGAAGAG...ACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGATGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR CAA 90 bp CATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGGTTGACTCTGCATGGATTGATTaGGCTAGCATATGTAGTAAT +
Preference number: 5 (lower is better)
Translates to: HGLIWLAYVVMTLPGVVDSAWID*ASICSN
Trigger: ATTACTACATATGCTAGCCAAATCAATCCATGCAGA...GTCAACCACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR CAA 90 bp CATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGGTTGACTATCATCTGCATGGATaGATTTGGCTAGCATATGTA +
Preference number: 5 (lower is better)
Translates to: HGLIWLAYVVMTLPGVVDYHLHG*IWLAYV
Trigger: TACATATGCTAGCCAAATCAATCCATGCAGATGATA...GTCAACCACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR CAA 90 bp TCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGGTTATCATCTGCATGGATaGATTTGGCTAGCATATGTA +
Preference number: 5 (lower is better)
Translates to: SAWIDLASICSNDSSWSGYHLHG*IWLAYV
Trigger: TACATATGCTAGCCAAATCAATCCATGCAGATGATA...ACCACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR CAA 90 bp ATATATCATCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTTTGAGGGCAGATTCCTaGGCAATACTTTTAGCCAGT +
Preference number: 5 (lower is better)
Translates to: IYHLHGLIWLAYVVMTLPLRADS*AILLAS
Trigger: ACTGGCTAAAAGTATTGCCAAGGAATCTGCCCTCAA...AGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGATGATATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR CAA 90 bp TCATCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTATGAACACTTGCTGTTaGGTAATCTTCATCTGTAGT +
Preference number: 5 (lower is better)
Translates to: SSAWIDLASICSNDSSWSMNTCC*VIFICS
Trigger: ACTACAGATGAAGATTACCAAACAGCAAGTGTTCAT...ACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGATGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR CAA 90 bp CCCAGTTTTGTGATCAAGAAATCAAGCTCCTCATTTAGACTGTGGTACTTATCCATGAACACTTGCTGTTaGGTAATCTTCATCTGTAGT +
Preference number: 5 (lower is better)
Translates to: PSFVIKKSSSSFRLWYLSMNTCC*VIFICS
Trigger: ACTACAGATGAAGATTACCAAACAGCAAGTGTTCAT...GGATAAGTACCACAGTCTAAATGAGGAGCTTGATTTCTTGATCACAAAACTGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442019.6
ENST00000458291.6
CDS-3UTR CAA 90 bp ATATATCATCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTCAAGAACTCTTGTTCTaGGGCCTCTTTTTCCCGTTT +
Preference number: 5 (lower is better)
Translates to: IYHLHGLIWLAYVVMTLPQELLF*GLFFPF
Trigger: AAACGGGAAAAAGAGGCCCAAGAACAAGAGTTCTTG...AGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGATGATATAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR CAA 90 bp TCATCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGTCGTTTTTGTATCCTaGGTAATATCTGACTTCAAG +
Preference number: 5 (lower is better)
Translates to: SSAWIDLASICSNDSSWSVVFVS*VISDFK
Trigger: CTTGAAGTCAGATATTACCAAGGATACAAAAACGAC...ACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGATGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR CAA 90 bp ATATATCATCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTTGTTCAGCATCAGAATaGATGATGTCCTGGCATGTG +
Preference number: 5 (lower is better)
Translates to: IYHLHGLIWLAYVVMTLPCSASE*MMSWHV
Trigger: CACATGCCAGGACATCATCAATTCTGATGCTGAACA...AGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGATGATATAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR CAA 90 bp AGTTTTGTGATCAAGAAATCAAGCTCCTCATTTAGACTGTGGTACTTATCCAGTACATCTCTGATACTCTaGGCTTCATCTGAATCACAG +
Preference number: 5 (lower is better)
Translates to: SFVIKKSSSSFRLWYLSSTSLIL*ASSESQ
Trigger: CTGTGATTCAGATGAAGCCAAGAGTATCAGAGATGT...ACTGGATAAGTACCACAGTCTAAATGAGGAGCTTGATTTCTTGATCACAAAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442019.6
ENST00000458291.6
CDS-3UTR CAA 90 bp CCCAGTTTTGTGATCAAGAAATCAAGCTCCTCATTTAGACTGTGGTACTTATCCTCTGCATGGATTGATTaGGCTAGCATATGTAGTAAT +
Preference number: 5 (lower is better)
Translates to: PSFVIKKSSSSFRLWYLSSAWID*ASICSN
Trigger: ATTACTACATATGCTAGCCAAATCAATCCATGCAGA...GGATAAGTACCACAGTCTAAATGAGGAGCTTGATTTCTTGATCACAAAACTGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442019.6
ENST00000458291.6
CDS-3UTR CAA 90 bp TCATCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTTGGTTTCCATACAGATaGGAGAATGTGAAAGCATTA +
Preference number: 5 (lower is better)
Translates to: SSAWIDLASICSNDSSWSWFPYR*ENVKAL
Trigger: TAATGCTTTCACATTCTCCAATCTGTATGGAAACCA...ACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGATGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR CAA 90 bp AGTTTTGTGATCAAGAAATCAAGCTCCTCATTTAGACTGTGGTACTTATCCAGTATACTCGTTACCAAGTaGGTCTGTATTTGCAGAAAC +
Preference number: 5 (lower is better)
Translates to: SFVIKKSSSSFRLWYLSSILVTK*VCICRN
Trigger: GTTTCTGCAAATACAGACCAACTTGGTAACGAGTAT...ACTGGATAAGTACCACAGTCTAAATGAGGAGCTTGATTTCTTGATCACAAAACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442019.6
ENST00000458291.6
CDS-3UTR CAA 90 bp TTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGGTTGACAAAAATACCTCTTCTTCTTTCTaGCTTAAGGTTTTGTCCATC +
Preference number: 5 (lower is better)
Translates to: LIWLAYVVMTLPGVVDKNTSSSF*LKVLSI
Trigger: GATGGACAAAACCTTAAGCAAGAAAGAAGAAGAGGT...ATTTTTGTCAACCACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR CAA 90 bp TTTGTGATCAAGAAATCAAGCTCCTCATTTAGACTGTGGTACTTATCCAGTTTGACCTCTTCTTCTTTCTaGCTTAAGGTTTTGTCCATC +
Preference number: 5 (lower is better)
Translates to: FVIKKSSSSFRLWYLSSLTSSSF*LKVLSI
Trigger: GATGGACAAAACCTTAAGCAAGAAAGAAGAAGAGGT...CAAACTGGATAAGTACCACAGTCTAAATGAGGAGCTTGATTTCTTGATCACAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442019.6
ENST00000458291.6
CDS-3UTR CAA 90 bp TTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGGTTGACAAAAATACCTTCTCACTCTCTTaGAAATGTTCAGCATCAGAA +
Preference number: 5 (lower is better)
Translates to: LIWLAYVVMTLPGVVDKNTFSLS*KCSASE
Trigger: TTCTGATGCTGAACATTTCAAAGAGAGTGAGAAGGT...ATTTTTGTCAACCACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000296742.11
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS TCA 90 bp TACAGATTGGAGAATGTGAAAGCATTACACCTTGAGAAAGATTGCTaGCATTCATGGTATCCGATTCTGACATGCTTTCTACTTTTTCAT +
Preference number: 5 (lower is better)
Translates to: YRLENVKALHLEKDC*HSWYPILTCFLLFH
Trigger: ATGAAAAAGTAGAAAGCATGTCAGAATCGGATACCATGAATGTCAGCAATCTTTCTCAAGGTGTAATGCTTTCACATTCTCCAATCTGTA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338150.8
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
ENST00000509324.1
ENST00000512086.5
ENST00000512691.1
CDS-3UTR CAA 90 bp ATATATCATCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTATACTCGTTACCAAGTaGGTCTGTATTTGCAGAAAC +
Preference number: 5 (lower is better)
Translates to: IYHLHGLIWLAYVVMTLPILVTK*VCICRN
Trigger: GTTTCTGCAAATACAGACCAACTTGGTAACGAGTAT...AGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGATGATATAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR CAA 90 bp TTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGGTTGACAAAAATGACATCAATGAACACTaGCTGTTTGGTAATCTTCAT +
Preference number: 5 (lower is better)
Translates to: LIWLAYVVMTLPGVVDKNDINEH*LFGNLH
Trigger: ATGAAGATTACCAAACAGCAAGTGTTCATTGATGTC...ATTTTTGTCAACCACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR CAA 90 bp ATATATCATCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTACCTCTTCTTCTTTCTaGCTTAAGGTTTTGTCCATC +
Preference number: 5 (lower is better)
Translates to: IYHLHGLIWLAYVVMTLPTSSSF*LKVLSI
Trigger: GATGGACAAAACCTTAAGCAAGAAAGAAGAAGAGGT...AGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGATGATATAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR CAA 90 bp TTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGGAGTGGTTGACAAAAATGTCGTTTTTGTATCCTaGGTAATATCTGACTTCAAG +
Preference number: 5 (lower is better)
Translates to: LIWLAYVVMTLPGVVDKNVVFVS*VISDFK
Trigger: CTTGAAGTCAGATATTACCAAGGATACAAAAACGAC...ATTTTTGTCAACCACTCCAGGAAGAGTCATTACTACATATGCTAGCCAAATCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR CAA 90 bp TTTGTGATCAAGAAATCAAGCTCCTCATTTAGACTGTGGTACTTATCCAGTTTGTCTGCATGGATTGATTaGGCTAGCATATGTAGTAAT +
Preference number: 5 (lower is better)
Translates to: FVIKKSSSSFRLWYLSSLSAWID*ASICSN
Trigger: ATTACTACATATGCTAGCCAAATCAATCCATGCAGA...CAAACTGGATAAGTACCACAGTCTAAATGAGGAGCTTGATTTCTTGATCACAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442019.6
ENST00000458291.6
CDS-3UTR CAA 90 bp ATATATCATCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTGACATCAATGAACACTaGCTGTTTGGTAATCTTCAT +
Preference number: 5 (lower is better)
Translates to: IYHLHGLIWLAYVVMTLPDINEH*LFGNLH
Trigger: ATGAAGATTACCAAACAGCAAGTGTTCATTGATGTC...AGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGATGATATAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296742.11
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS-3UTR CAA 90 bp ATATATCATCTGCATGGATTGATTTGGCTAGCATATGTAGTAATGACTCTTCCTTGGTTTCCATACAGATaGGAGAATGTGAAAGCATTA +
Preference number: 5 (lower is better)
Translates to: IYHLHGLIWLAYVVMTLPWFPYR*ENVKAL
Trigger: TAATGCTTTCACATTCTCCAATCTGTATGGAAACCA...AGGAAGAGTCATTACTACATATGCTAGCCAAATCAATCCATGCAGATGATATAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
CDS GCA 72 bp CGTCCGCCCGCGCCGGGGGAACTCCGCAGAGACAGGTaGAGCCCGCGAGGCCCGAGCGACCCTACTGTGGGT +
Preference number: 6 (lower is better)
Translates to: RPPAPGELRRDR*SPRGPSDPTVG
Trigger: ACCCACAGTAGGGTCGCTCGGGCCTCGCGGGCTGCACCTGTCTCTGCGGAGTTCCCCCGGCGCGGGCGGACG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296742.11
ENST00000502583.6
CDS TCA 72 bp GCAATCGGGCTCCCGGAGTGCTGGAACGCCCCTGTGTaGCGTCCGCCCGCGCCGGGGGAACTCCGCAGAGAC +
Preference number: 6 (lower is better)
Translates to: AIGLPECWNAPV*RPPAPGELRRD
Trigger: GTCTCTGCGGAGTTCCCCCGGCGCGGGCGGACGTCACACAGGGGCGTTCCAGCACTCCGGGAGCCCGATTGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296742.11
ENST00000502583.6
CDS TCA 72 bp CGGGCCTCGCCGTGCCGGCTACTCAACACGCCTTCCTaGGAGCACAGAACATCCACAGCCCTATACAGCGCG +
Preference number: 6 (lower is better)
Translates to: RASPCRLLNTPS*EHRTSTALYSA
Trigger: CGCGCTGTATAGGGCTGTGGATGTTCTGTGCTCTCAGGAAGGCGTGTTGAGTAGCCGGCACGGCGAGGCCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502583.6
CDS GCA 72 bp CTAGGCCGAACAGCCTGTGGGCTAGCTGGCGCCTCCTaGCGCAGTAAACACAAAGTGGGGTACAGAAACGAA +
Preference number: 6 (lower is better)
Translates to: LGRTACGLAGAS*RSKHKVGYRNE
Trigger: TTCGTTTCTGTACCCCACTTTGTGTTTACTGCGGCAGGAGGCGCCAGCTAGCCCACAGGCTGTTCGGCCTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296742.11
ENST00000502583.6
CDS CAA 72 bp CACAAAAGTGTGCTCACTTCCAGGATCCATAGTTTCTaGGACCCACGCTACGGACCTGGCTCTCCCTCCCTC +
Preference number: 6 (lower is better)
Translates to: HKSVLTSRIHSF*DPRYGPGSPSL
Trigger: GAGGGAGGGAGAGCCAGGTCCGTAGCGTGGGTCCAAGAAACTATGGATCCTGGAAGTGAGCACACTTTTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000296742.11
ENST00000338150.8
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
ENST00000509324.1
ENST00000512086.5
CDS CCA 72 bp ACAAAAGTGTGCTCACTTCCAGGATCCATAGTTTCTTaGACCCACGCTACGGACCTGGCTCTCCCTCCCTCT +
Preference number: 6 (lower is better)
Translates to: TKVCSLPGSIVS*THATDLALPPS
Trigger: AGAGGGAGGGAGAGCCAGGTCCGTAGCGTGGGTCCAAGAAACTATGGATCCTGGAAGTGAGCACACTTTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000296742.11
ENST00000338150.8
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
ENST00000509324.1
ENST00000512086.5
CDS CAA 72 bp GCAGTCTTACATAAGAAGCTTGGAGGTTGGCTAGGGTaGAGGGCAGATTCCTTGGCAATACTTTTAGCCAGT +
Preference number: 6 (lower is better)
Translates to: AVLHKKLGGWLG*RADSLAILLAS
Trigger: ACTGGCTAAAAGTATTGCCAAGGAATCTGCCCTCAACCCTAGCCAACCTCCAAGCTTCTTATGTAAGACTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296742.11
ENST00000338150.8
ENST00000379918.8
ENST00000458291.6
ENST00000502583.6
ENST00000512086.5
ENST00000512691.1
CDS CAA 72 bp GAACTGCAGTATAAGAAGCTTGGAGGTTGGCTAGGGTaGAGGGCAGATTCCTTGGCAATACTTTTAGCCAGT +
Preference number: 6 (lower is better)
Translates to: ELQYKKLGGWLG*RADSLAILLAS
Trigger: ACTGGCTAAAAGTATTGCCAAGGAATCTGCCCTCAACCCTAGCCAACCTCCAAGCTTCTTATACTGCAGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442019.6
CDS CAA 90 bp GAAGGAACTGCAGTCTTACATAAGAAGCTTGGAGGTTGGCTAGGGTaGAGGGCAGATTCCTTGGCAATACTTTTAGCCAGTGACTTTTCT +
Preference number: 6 (lower is better)
Translates to: EGTAVLHKKLGGWLG*RADSLAILLASDFS
Trigger: AGAAAAGTCACTGGCTAAAAGTATTGCCAAGGAATCTGCCCTCAACCCTAGCCAACCTCCAAGCTTCTTATGTAAGACTGCAGTTCCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000296742.11
ENST00000338150.8
ENST00000379918.8
ENST00000458291.6
ENST00000502583.6
ENST00000512086.5
ENST00000512691.1
CDS CCA 72 bp CTTTTGAAGGAACTGCAGTATAAGAAGCTTGGAGGTTaGCTAGGGTTGAGGGCAGATTCCTTGGCAATACTT +
Preference number: 6 (lower is better)
Translates to: LLKELQYKKLGG*LGLRADSLAIL
Trigger: AAGTATTGCCAAGGAATCTGCCCTCAACCCTAGCCAACCTCCAAGCTTCTTATACTGCAGTTCCTTCAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442019.6
CDS CAA 90 bp ACCAAGAAATCAAGCTCCTCATTTAGACTGTGGTACTTATCCAGTTaGGCTCCCAGAAGGGTAGGTACATCTCTGATACTCTTGGCTTCA +
Preference number: 6 (lower is better)
Translates to: TKKSSSSFRLWYLSS*APRRVGTSLILLAS
Trigger: TGAAGCCAAGAGTATCAGAGATGTACCTACCCTTCTGGGAGCCAAACTGGATAAGTACCACAGTCTAAATGAGGAGCTTGATTTCTTGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296742.11
ENST00000338150.8
ENST00000512086.5
CDS CAA 72 bp TTGGCTCCCAGAAGGGTAGGTACATCTCTGATACTCTaGGCTTCATCTGAATCACAGTCTATGACCTCTTTA +
Preference number: 6 (lower is better)
Translates to: LAPRRVGTSLIL*ASSESQSMTSL
Trigger: TAAAGAGGTCATAGACTGTGATTCAGATGAAGCCAAGAGTATCAGAGATGTACCTACCCTTCTGGGAGCCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296742.11
ENST00000512086.5
CDS CAA 72 bp GCAAGTCACAAGTGGTGCCGGTGGTTTCCATACAGATaGGAGAATGTGAAAGCATTACACCTTGAGAAAGAT +
Preference number: 6 (lower is better)
Translates to: ASHKWCRWFPYR*ENVKALHLEKD
Trigger: ATCTTTCTCAAGGTGTAATGCTTTCACATTCTCCAATCTGTATGGAAACCACCGGCACCACTTGTGACTTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338150.8
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
ENST00000509324.1
ENST00000512086.5
ENST00000512691.1
CDS CAA 90 bp AGGCGGGCTTCTAGGAGGAGGCTGTCTAAAATACTCGTTACCAAGTaGGTCTGTATTTGCAGAAACACTAGTTTCCATTGGATTTTCTTC +
Preference number: 6 (lower is better)
Translates to: RRASRRRLSKILVTK*VCICRNTSFHWIFF
Trigger: GAAGAAAATCCAATGGAAACTAGTGTTTCTGCAAATACAGACCAACTTGGTAACGAGTATTTTAGACAGCCTCCTCCTAGAAGCCCGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000296742.11
ENST00000338150.8
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
ENST00000512086.5
ENST00000512691.1
CDS CAA 90 bp CAGTATAAGAAGCTTGGAGGTTGGCTAGGGTTGAGGGCAGATTCCTaGGCAATACTTTTAGCCAGTGACTTTTCTGTAAATTTCAGCATC +
Preference number: 6 (lower is better)
Translates to: QYKKLGGWLGLRADS*AILLASDFSVNFSI
Trigger: GATGCTGAAATTTACAGAAAAGTCACTGGCTAAAAGTATTGCCAAGGAATCTGCCCTCAACCCTAGCCAACCTCCAAGCTTCTTATACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442019.6
CDS TCA 72 bp CACACCCTCTGCTGTGACTTCCTTTTCATAACTGACTaGCATCTCAGGAATCTCCCCATAATTCTGTATTTC +
Preference number: 6 (lower is better)
Translates to: HTLCCDFLFITD*HLRNLPIILYF
Trigger: GAAATACAGAATTATGGGGAGATTCCTGAGATGTCAGTCAGTTATGAAAAGGAAGTCACAGCAGAGGGTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000296742.11
ENST00000338150.8
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
ENST00000509324.1
ENST00000512086.5
ENST00000512691.1
CDS TCA 72 bp AGTGGTGCCGGTGGTTTCCATACAGATTGGAGAATGTaGAAGCATTACACCTTGAGAAAGATTGCTGACATT +
Preference number: 6 (lower is better)
Translates to: SGAGGFHTDWRM*KHYTLRKIADI
Trigger: AATGTCAGCAATCTTTCTCAAGGTGTAATGCTTTCACATTCTCCAATCTGTATGGAAACCACCGGCACCACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338150.8
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
ENST00000509324.1
ENST00000512086.5
ENST00000512691.1
CDS CCA 72 bp TTATTTCGTTCTGAGGCAAGTCACAAGTGGTGCCGGTaGTTTCCATACAGATTGGAGAATGTGAAAGCATTA +
Preference number: 6 (lower is better)
Translates to: LFRSEASHKWCR*FPYRLENVKAL
Trigger: TAATGCTTTCACATTCTCCAATCTGTATGGAAACCACCGGCACCACTTGTGACTTGCCTCAGAACGAAATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338150.8
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
ENST00000509324.1
ENST00000512086.5
ENST00000512691.1
CDS CCA 72 bp CAAAATTCTTTATTTCGTTCTGAGGCAAGTCACAAGTaGTGCCGGTGGTTTCCATACAGATTGGAGAATGTG +
Preference number: 6 (lower is better)
Translates to: QNSLFRSEASHK*CRWFPYRLENV
Trigger: CACATTCTCCAATCTGTATGGAAACCACCGGCACCACTTGTGACTTGCCTCAGAACGAAATAAAGAATTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338150.8
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
ENST00000509324.1
ENST00000512086.5
ENST00000512691.1
CDS CAA 90 bp TTACATAAGAAGCTTGGAGGTTGGCTAGGGTTGAGGGCAGATTCCTaGGCAATACTTTTAGCCAGTGACTTTTCTGTAAATTTCAGCATC +
Preference number: 6 (lower is better)
Translates to: LHKKLGGWLGLRADS*AILLASDFSVNFSI
Trigger: GATGCTGAAATTTACAGAAAAGTCACTGGCTAAAAGTATTGCCAAGGAATCTGCCCTCAACCCTAGCCAACCTCCAAGCTTCTTATGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000296742.11
ENST00000338150.8
ENST00000379918.8
ENST00000458291.6
ENST00000502583.6
ENST00000512086.5
ENST00000512691.1
CDS TCA 72 bp TGCAAACGGTTTCAAATTGTCTCAAGGAAGATATGCTaGTGGTGTCAACTGGCTGAATTAGTGCATTCGTTG +
Preference number: 6 (lower is better)
Translates to: CKRFQIVSRKIC*WCQLAELVHSL
Trigger: CAACGAATGCACTAATTCAGCCAGTTGACACCATCAGCATATCTTCCTTGAGACAATTTGAAACCGTTTGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000296742.11
ENST00000338150.8
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
ENST00000512086.5
ENST00000512691.1
CDS GCA 72 bp AATTCTTTATTTCGTTCTGAGGCAAGTCACAAGTGGTaGCGGTGGTTTCCATACAGATTGGAGAATGTGAAA +
Preference number: 6 (lower is better)
Translates to: NSLFRSEASHKW*RWFPYRLENVK
Trigger: TTTCACATTCTCCAATCTGTATGGAAACCACCGGCACCACTTGTGACTTGCCTCAGAACGAAATAAAGAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338150.8
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
ENST00000509324.1
ENST00000512086.5
ENST00000512691.1
CDS CCA 72 bp CTAGGAGGAGGCTGTCTAAAATACTCGTTACCAAGTTaGTCTGTATTTGCAGAAACACTAGTTTCCATTGGA +
Preference number: 6 (lower is better)
Translates to: LGGGCLKYSLPS*SVFAETLVSIG
Trigger: TCCAATGGAAACTAGTGTTTCTGCAAATACAGACCAACTTGGTAACGAGTATTTTAGACAGCCTCCTCCTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000296742.11
ENST00000338150.8
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
ENST00000512086.5
ENST00000512691.1
CDS CAA 72 bp TCTAGGAGGAGGCTGTCTAAAATACTCGTTACCAAGTaGGTCTGTATTTGCAGAAACACTAGTTTCCATTGG +
Preference number: 6 (lower is better)
Translates to: SRRRLSKILVTK*VCICRNTSFHW
Trigger: CCAATGGAAACTAGTGTTTCTGCAAATACAGACCAACTTGGTAACGAGTATTTTAGACAGCCTCCTCCTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000296742.11
ENST00000338150.8
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
ENST00000512086.5
ENST00000512691.1
CDS CAA 90 bp TTATCCAGTTTGGCTCCCAGAAGGGTAGGTACATCTCTGATACTCTaGGCTTCATCTGAATCACAGTCTATGACCTCTTTATCTAAAGTT +
Preference number: 6 (lower is better)
Translates to: LSSLAPRRVGTSLIL*ASSESQSMTSLSKV
Trigger: AACTTTAGATAAAGAGGTCATAGACTGTGATTCAGATGAAGCCAAGAGTATCAGAGATGTACCTACCCTTCTGGGAGCCAAACTGGATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296742.11
ENST00000512086.5
CDS TCA 72 bp GAGAATGTGAAAGCATTACACCTTGAGAAAGATTGCTaGCATTCATGGTATCCGATTCTGACATGCTTTCTA +
Preference number: 6 (lower is better)
Translates to: ENVKALHLEKDC*HSWYPILTCFL
Trigger: TAGAAAGCATGTCAGAATCGGATACCATGAATGTCAGCAATCTTTCTCAAGGTGTAATGCTTTCACATTCTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338150.8
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
ENST00000509324.1
ENST00000512086.5
ENST00000512691.1
CDS GCA 72 bp TCATTTCATCATCAAATGCTTCTACCCAGTGAAATTTaGAAACGGTTTCAAATTGTCTCAAGGAAGATATGC +
Preference number: 6 (lower is better)
Translates to: SFHHQMLLPSEI*KRFQIVSRKIC
Trigger: GCATATCTTCCTTGAGACAATTTGAAACCGTTTGCAAATTTCACTGGGTAGAAGCATTTGATGATGAAATGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000296742.11
ENST00000338150.8
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
ENST00000512086.5
ENST00000512691.1
CDS GCA 72 bp TTGAAATTCTGGCTTCTCTGTCATTTCATCATCAAATaGTTCTACCCAGTGAAATTTGCAAACGGTTTCAAA +
Preference number: 6 (lower is better)
Translates to: LKFWLLCHFIIK*FYPVKFANGFK
Trigger: TTTGAAACCGTTTGCAAATTTCACTGGGTAGAAGCATTTGATGATGAAATGACAGAGAAGCCAGAATTTCAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000296742.11
ENST00000338150.8
ENST00000379918.8
ENST00000442019.6
ENST00000458291.6
ENST00000502583.6
ENST00000512086.5
ENST00000512691.1