RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CADPS2 (Homo sapiens)

Ensembl gene IDs: ENSG00000081803

Ensembl transcript IDs: ENST00000313070.11, ENST00000334010.11, ENST00000397721.4, ENST00000412584.6, ENST00000449022.7, ENST00000462699.5, ENST00000476131.1, ENST00000615869.4

Found 864 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ACAGAGCAATGTGTCGTGGAACAGCAAGCTTGGGGATGGTGCCATTaGAGAGTTTGGGATAGCATGACTGGACATTTGAGGGTTTGGAGA +
Preference number: 1 (lower is better)
Translates to: TEQCVVEQQAWGWCH*RVWDSMTGHLRVWR
Trigger: TCTCCAAACCCTCAAATGTCCAGTCATGCTATCCCAAACTCTCCAATGGCACCATCCCCAAGCTTGCTGTTCCACGACACATTGCTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
3UTR GCA 90 bp CTAAGTACAGAGCAATGTGTCGTGGAACAGCAAGCTTGGGGATGGTaGCATTGGAGAGTTTGGGATAGCATGACTGGACATTTGAGGGTT +
Preference number: 1 (lower is better)
Translates to: LSTEQCVVEQQAWGW*HWRVWDSMTGHLRV
Trigger: AACCCTCAAATGTCCAGTCATGCTATCCCAAACTCTCCAATGGCACCATCCCCAAGCTTGCTGTTCCACGACACATTGCTCTGTACTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
3UTR CCA 90 bp TTACTAAGTACAGAGCAATGTGTCGTGGAACAGCAAGCTTGGGGATaGTGCCATTGGAGAGTTTGGGATAGCATGACTGGACATTTGAGG +
Preference number: 1 (lower is better)
Translates to: LLSTEQCVVEQQAWG*CHWRVWDSMTGHLR
Trigger: CCTCAAATGTCCAGTCATGCTATCCCAAACTCTCCAATGGCACCATCCCCAAGCTTGCTGTTCCACGACACATTGCTCTGTACTTAGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
3UTR GCA 90 bp GGATACGACAGTGTTGGTGCAGTGGTCCGAACTGACTTCTCACAATaGTGCATTATGAGAAATATGTATCTCGCTTTACACAGAAAACAT +
Preference number: 1 (lower is better)
Translates to: GYDSVGAVVRTDFSQ*CIMRNMYLALHRKH
Trigger: ATGTTTTCTGTGTAAAGCGAGATACATATTTCTCATAATGCAGCATTGTGAGAAGTCAGTTCGGACCACTGCACCAACACTGTCGTATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
3UTR TCA 90 bp ACCATTTTAACAAGGATACGACAGTGTTGGTGCAGTGGTCCGAACTaGCTTCTCACAATGCTGCATTATGAGAAATATGTATCTCGCTTT +
Preference number: 1 (lower is better)
Translates to: TILTRIRQCWCSGPN*LLTMLHYEKYVSRF
Trigger: AAAGCGAGATACATATTTCTCATAATGCAGCATTGTGAGAAGTCAGTTCGGACCACTGCACCAACACTGTCGTATCCTTGTTAAAATGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
3UTR GCA 90 bp TACGACAGTGTTGGTGCAGTGGTCCGAACTGACTTCTCACAATGCTaGATTATGAGAAATATGTATCTCGCTTTACACAGAAAACATCAT +
Preference number: 1 (lower is better)
Translates to: YDSVGAVVRTDFSQC*IMRNMYLALHRKHH
Trigger: ATGATGTTTTCTGTGTAAAGCGAGATACATATTTCTCATAATGCAGCATTGTGAGAAGTCAGTTCGGACCACTGCACCAACACTGTCGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
3UTR CCA 90 bp GAATGGAACAAAGACACAAACCCATTGGATAATCTAGTCTATATTTaGGTTTGGCAATCCTTTCATCCCAGGAATATACCTGTAGACCAA +
Preference number: 1 (lower is better)
Translates to: EWNKDTNPLDNLVYI*VWQSFHPRNIPVDQ
Trigger: TTGGTCTACAGGTATATTCCTGGGATGAAAGGATTGCCAAACCCAAATATAGACTAGATTATCCAATGGGTTTGTGTCTTTGTTCCATTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
3UTR CCA 90 bp AACAAAGACACAAACCCATTGGATAATCTAGTCTATATTTGGGTTTaGCAATCCTTTCATCCCAGGAATATACCTGTAGACCAATTCAAA +
Preference number: 1 (lower is better)
Translates to: NKDTNPLDNLVYIWV*QSFHPRNIPVDQFK
Trigger: TTTGAATTGGTCTACAGGTATATTCCTGGGATGAAAGGATTGCCAAACCCAAATATAGACTAGATTATCCAATGGGTTTGTGTCTTTGTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
3UTR-3UTR TCA 90 bp GAATATGGTATCTTGACGGAAGCACACTTGCTACCCCACACCTGGGGATTACTTTGCAGTGGTCCGAACTaGCTTCTCACAATGCTGCAT +
Preference number: 2 (lower is better)
Translates to: EYGILTEAHLLPHTWGLLCSGPN*LLTMLH
Trigger: ATGCAGCATTGTGAGAAGTCAGTTCGGACCACTGCA...AAGTAATCCCCAGGTGTGGGGTAGCAAGTGTGCTTCCGTCAAGATACCATATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
3UTR-3UTR TCA 90 bp TTACTAAGTACAGAGCAATGTGTCGTGGAACAGCAAGCTTGGGGATGGTGCCATTGCAGTGGTCCGAACTaGCTTCTCACAATGCTGCAT +
Preference number: 2 (lower is better)
Translates to: LLSTEQCVVEQQAWGWCHCSGPN*LLTMLH
Trigger: ATGCAGCATTGTGAGAAGTCAGTTCGGACCACTGCA...ATGGCACCATCCCCAAGCTTGCTGTTCCACGACACATTGCTCTGTACTTAGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
3UTR-3UTR CCA 90 bp TTACTAAGTACAGAGCAATGTGTCGTGGAACAGCAAGCTTGGGGATGGTGCCATACAGTGTTGGTGCAGTaGTCCGAACTGACTTCTCAC +
Preference number: 2 (lower is better)
Translates to: LLSTEQCVVEQQAWGWCHTVLVQ*SELTSH
Trigger: GTGAGAAGTCAGTTCGGACCACTGCACCAACACTGT...ATGGCACCATCCCCAAGCTTGCTGTTCCACGACACATTGCTCTGTACTTAGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
3UTR-3UTR CCA 90 bp TGTTATACTGGAGCAGGAGAATATGGTATCTTGACGGAAGCACACTTGCTACCCACAGTGTTGGTGCAGTaGTCCGAACTGACTTCTCAC +
Preference number: 2 (lower is better)
Translates to: CYTGAGEYGILTEAHLLPTVLVQ*SELTSH
Trigger: GTGAGAAGTCAGTTCGGACCACTGCACCAACACTGT...GGGTAGCAAGTGTGCTTCCGTCAAGATACCATATTCTCCTGCTCCAGTATAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
3UTR CAA 90 bp TTATTGCCTGCAAGCTGTTATACTGGAGCAGGAGAATATGGTATCTaGACGGAAGCACACTTGCTACCCCACACCTGGGGATTACTTATA +
Preference number: 2 (lower is better)
Translates to: LLPASCYTGAGEYGI*TEAHLLPHTWGLLI
Trigger: TATAAGTAATCCCCAGGTGTGGGGTAGCAAGTGTGCTTCCGTCAAGATACCATATTCTCCTGCTCCAGTATAACAGCTTGCAGGCAATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
3UTR-3UTR TCA 90 bp GAATATGGTATCTTGACGGAAGCACACTTGCTACCCCACACCTGGGGATTACTTAAAAAGTTCATGTTCTaGTCACAAGCAGAGCCAAGG +
Preference number: 2 (lower is better)
Translates to: EYGILTEAHLLPHTWGLLKKFMF*SQAEPR
Trigger: CCTTGGCTCTGCTTGTGATCAGAACATGAACTTTTT...AAGTAATCCCCAGGTGTGGGGTAGCAAGTGTGCTTCCGTCAAGATACCATATTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
3UTR-3UTR CCA 90 bp GAAGGAAGAAATTTCCTTGTTTGTTATCTTAGCCCTAGGGCCCAGAAAATGAGCACAGTGTTGGTGCAGTaGTCCGAACTGACTTCTCAC +
Preference number: 2 (lower is better)
Translates to: EGRNFLVCYLSPRAQKMSTVLVQ*SELTSH
Trigger: GTGAGAAGTCAGTTCGGACCACTGCACCAACACTGT...GCTCATTTTCTGGGCCCTAGGGCTAAGATAACAAACAAGGAAATTTCTTCCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
3UTR-3UTR CCA 90 bp TTACTAAGTACAGAGCAATGTGTCGTGGAACAGCAAGCTTGGGGATGGTGCCATGTCTATATTTGGGTTTaGCAATCCTTTCATCCCAGG +
Preference number: 2 (lower is better)
Translates to: LLSTEQCVVEQQAWGWCHVYIWV*QSFHPR
Trigger: CCTGGGATGAAAGGATTGCCAAACCCAAATATAGAC...ATGGCACCATCCCCAAGCTTGCTGTTCCACGACACATTGCTCTGTACTTAGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
3UTR-3UTR CCA 90 bp GAATATGGTATCTTGACGGAAGCACACTTGCTACCCCACACCTGGGGATTACTTGTCTATATTTGGGTTTaGCAATCCTTTCATCCCAGG +
Preference number: 2 (lower is better)
Translates to: EYGILTEAHLLPHTWGLLVYIWV*QSFHPR
Trigger: CCTGGGATGAAAGGATTGCCAAACCCAAATATAGAC...AAGTAATCCCCAGGTGTGGGGTAGCAAGTGTGCTTCCGTCAAGATACCATATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
3UTR-3UTR TCA 90 bp TGTTATACTGGAGCAGGAGAATATGGTATCTTGACGGAAGCACACTTGCTACCCAAAAAGTTCATGTTCTaGTCACAAGCAGAGCCAAGG +
Preference number: 2 (lower is better)
Translates to: CYTGAGEYGILTEAHLLPKKFMF*SQAEPR
Trigger: CCTTGGCTCTGCTTGTGATCAGAACATGAACTTTTT...GGGTAGCAAGTGTGCTTCCGTCAAGATACCATATTCTCCTGCTCCAGTATAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
3UTR-3UTR TCA 90 bp GAATATGGTATCTTGACGGAAGCACACTTGCTACCCCACACCTGGGGATTACTTCACAATGCTGCATTATaGGAAATATGTATCTCGCTT +
Preference number: 2 (lower is better)
Translates to: EYGILTEAHLLPHTWGLLHNAAL*EICISL
Trigger: AAGCGAGATACATATTTCTCATAATGCAGCATTGTG...AAGTAATCCCCAGGTGTGGGGTAGCAAGTGTGCTTCCGTCAAGATACCATATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
3UTR-3UTR TCA 90 bp GAAGGAAGAAATTTCCTTGTTTGTTATCTTAGCCCTAGGGCCCAGAAAATGAGCGAGAATATGGTATCTTaGCGGAAGCACACTTGCTAC +
Preference number: 2 (lower is better)
Translates to: EGRNFLVCYLSPRAQKMSENMVS*RKHTCY
Trigger: GTAGCAAGTGTGCTTCCGTCAAGATACCATATTCTC...GCTCATTTTCTGGGCCCTAGGGCTAAGATAACAAACAAGGAAATTTCTTCCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
3UTR-3UTR CCA 90 bp GAAGGAAGAAATTTCCTTGTTTGTTATCTTAGCCCTAGGGCCCAGAAAATGAGCCCACTTATTACACCATaGGAGAACGAATCTGGAGGT +
Preference number: 2 (lower is better)
Translates to: EGRNFLVCYLSPRAQKMSPLITP*ENESGG
Trigger: ACCTCCAGATTCGTTCTCCCATGGTGTAATAAGTGG...GCTCATTTTCTGGGCCCTAGGGCTAAGATAACAAACAAGGAAATTTCTTCCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
3UTR CAA 90 bp TGTTATACTGGAGCAGGAGAATATGGTATCTTGACGGAAGCACACTaGCTACCCCACACCTGGGGATTACTTATAGTTGAAAGAAGAAAT +
Preference number: 2 (lower is better)
Translates to: CYTGAGEYGILTEAH*LPHTWGLLIVERRN
Trigger: ATTTCTTCTTTCAACTATAAGTAATCCCCAGGTGTGGGGTAGCAAGTGTGCTTCCGTCAAGATACCATATTCTCCTGCTCCAGTATAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
3UTR-3UTR TCA 90 bp GAAGGAAGAAATTTCCTTGTTTGTTATCTTAGCCCTAGGGCCCAGAAAATGAGCAAAAAGTTCATGTTCTaGTCACAAGCAGAGCCAAGG +
Preference number: 2 (lower is better)
Translates to: EGRNFLVCYLSPRAQKMSKKFMF*SQAEPR
Trigger: CCTTGGCTCTGCTTGTGATCAGAACATGAACTTTTT...GCTCATTTTCTGGGCCCTAGGGCTAAGATAACAAACAAGGAAATTTCTTCCTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
3UTR-3UTR GCA 90 bp TTACTAAGTACAGAGCAATGTGTCGTGGAACAGCAAGCTTGGGGATGGTGCCATTACCTCCACTTATTCTaGATTAACTGCCTTCATTTA +
Preference number: 2 (lower is better)
Translates to: LLSTEQCVVEQQAWGWCHYLHLF*INCLHL
Trigger: TAAATGAAGGCAGTTAATGCAGAATAAGTGGAGGTA...ATGGCACCATCCCCAAGCTTGCTGTTCCACGACACATTGCTCTGTACTTAGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
3UTR-3UTR CCA 90 bp GAAGGAAGAAATTTCCTTGTTTGTTATCTTAGCCCTAGGGCCCAGAAAATGAGCTTGCTACCCCACACCTaGGGATTACTTATAGTTGAA +
Preference number: 2 (lower is better)
Translates to: EGRNFLVCYLSPRAQKMSLLPHT*GLLIVE
Trigger: TTCAACTATAAGTAATCCCCAGGTGTGGGGTAGCAA...GCTCATTTTCTGGGCCCTAGGGCTAAGATAACAAACAAGGAAATTTCTTCCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
3UTR-3UTR GCA 90 bp ATATGGTATCTTGACGGAAGCACACTTGCTACCCCACACCTGGGGATTACTTATACTGACTTCTCACAATaGTGCATTATGAGAAATATG +
Preference number: 2 (lower is better)
Translates to: IWYLDGSTLATPHLGITYTDFSQ*CIMRNM
Trigger: CATATTTCTCATAATGCAGCATTGTGAGAAGTCAGT...ATAAGTAATCCCCAGGTGTGGGGTAGCAAGTGTGCTTCCGTCAAGATACCATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
3UTR-3UTR TCA 90 bp AGATTTTTATTGCCTGCAAGCTGTTATACTGGAGCAGGAGAATATGGTATCTTGAAAAAGTTCATGTTCTaGTCACAAGCAGAGCCAAGG +
Preference number: 2 (lower is better)
Translates to: RFLLPASCYTGAGEYGILKKFMF*SQAEPR
Trigger: CCTTGGCTCTGCTTGTGATCAGAACATGAACTTTTT...CAAGATACCATATTCTCCTGCTCCAGTATAACAGCTTGCAGGCAATAAAAATCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
3UTR-3UTR CCA 90 bp ATTTTTATTGCCTGCAAGCTGTTATACTGGAGCAGGAGAATATGGTATCTTGACTTGCTACCCCACACCTaGGGATTACTTATAGTTGAA +
Preference number: 2 (lower is better)
Translates to: IFIACKLLYWSRRIWYLDLLPHT*GLLIVE
Trigger: TTCAACTATAAGTAATCCCCAGGTGTGGGGTAGCAA...GTCAAGATACCATATTCTCCTGCTCCAGTATAACAGCTTGCAGGCAATAAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
3UTR-3UTR GCA 90 bp GAAGGAAGAAATTTCCTTGTTTGTTATCTTAGCCCTAGGGCCCAGAAAATGAGCAAACGTTTTCATAAATaGAGGGATACCTCCACTTAT +
Preference number: 2 (lower is better)
Translates to: EGRNFLVCYLSPRAQKMSKRFHK*RDTSTY
Trigger: ATAAGTGGAGGTATCCCTGCATTTATGAAAACGTTT...GCTCATTTTCTGGGCCCTAGGGCTAAGATAACAAACAAGGAAATTTCTTCCTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
3UTR-3UTR TCA 90 bp GACTTCTCACAATGCTGCATTATGAGAAATATGTATCTCGCTTTACACAGAAAAAAAAAGTTCATGTTCTaGTCACAAGCAGAGCCAAGG +
Preference number: 2 (lower is better)
Translates to: DFSQCCIMRNMYLALHRKKKFMF*SQAEPR
Trigger: CCTTGGCTCTGCTTGTGATCAGAACATGAACTTTTT...TTTTCTGTGTAAAGCGAGATACATATTTCTCATAATGCAGCATTGTGAGAAGTC
38% GC, longest homopolymer 9 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
3UTR-3UTR GCA 90 bp TTTTTATTGCCTGCAAGCTGTTATACTGGAGCAGGAGAATATGGTATCTTGACGACTGACTTCTCACAATaGTGCATTATGAGAAATATG +
Preference number: 2 (lower is better)
Translates to: FLLPASCYTGAGEYGILTTDFSQ*CIMRNM
Trigger: CATATTTCTCATAATGCAGCATTGTGAGAAGTCAGT...CGTCAAGATACCATATTCTCCTGCTCCAGTATAACAGCTTGCAGGCAATAAAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
3UTR-3UTR GCA 90 bp ATTTTTATTGCCTGCAAGCTGTTATACTGGAGCAGGAGAATATGGTATCTTGACACTGACTTCTCACAATaGTGCATTATGAGAAATATG +
Preference number: 2 (lower is better)
Translates to: IFIACKLLYWSRRIWYLDTDFSQ*CIMRNM
Trigger: CATATTTCTCATAATGCAGCATTGTGAGAAGTCAGT...GTCAAGATACCATATTCTCCTGCTCCAGTATAACAGCTTGCAGGCAATAAAAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
3UTR GCA 72 bp GAGCAATGTGTCGTGGAACAGCAAGCTTGGGGATGGTaGCATTGGAGAGTTTGGGATAGCATGACTGGACAT +
Preference number: 3 (lower is better)
Translates to: EQCVVEQQAWGW*HWRVWDSMTGH
Trigger: ATGTCCAGTCATGCTATCCCAAACTCTCCAATGGCACCATCCCCAAGCTTGCTGTTCCACGACACATTGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
3UTR CCA 72 bp ACAGAGCAATGTGTCGTGGAACAGCAAGCTTGGGGATaGTGCCATTGGAGAGTTTGGGATAGCATGACTGGA +
Preference number: 3 (lower is better)
Translates to: TEQCVVEQQAWG*CHWRVWDSMTG
Trigger: TCCAGTCATGCTATCCCAAACTCTCCAATGGCACCATCCCCAAGCTTGCTGTTCCACGACACATTGCTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
3UTR-3UTR CAA 90 bp GAATATGGTATCTTGACGGAAGCACACTTGCTACCCCACACCTGGGGATTACTTAAGGATACGACAGTGTaGGTGCAGTGGTCCGAACTG +
Preference number: 3 (lower is better)
Translates to: EYGILTEAHLLPHTWGLLKDTTV*VQWSEL
Trigger: CAGTTCGGACCACTGCACCAACACTGTCGTATCCTT...AAGTAATCCCCAGGTGTGGGGTAGCAAGTGTGCTTCCGTCAAGATACCATATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
3UTR-3UTR CAA 90 bp TGCCATTGGAGAGTTTGGGATAGCATGACTGGACATTTGAGGGTTTGGAGAAAATTGACGGAAGCACACTaGCTACCCCACACCTGGGGA +
Preference number: 3 (lower is better)
Translates to: CHWRVWDSMTGHLRVWRKLTEAH*LPHTWG
Trigger: TCCCCAGGTGTGGGGTAGCAAGTGTGCTTCCGTCAA...TTTTCTCCAAACCCTCAAATGTCCAGTCATGCTATCCCAAACTCTCCAATGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
3UTR TCA 72 bp CAAGCTGTTATACTGGAGCAGGAGAATATGGTATCTTaGCGGAAGCACACTTGCTACCCCACACCTGGGGAT +
Preference number: 3 (lower is better)
Translates to: QAVILEQENMVS*RKHTCYPTPGD
Trigger: ATCCCCAGGTGTGGGGTAGCAAGTGTGCTTCCGTCAAGATACCATATTCTCCTGCTCCAGTATAACAGCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
3UTR CCA 72 bp GAACAGCAAGCTTGGGGATGGTGCCATTGGAGAGTTTaGGATAGCATGACTGGACATTTGAGGGTTTGGAGA +
Preference number: 3 (lower is better)
Translates to: EQQAWGWCHWRV*DSMTGHLRVWR
Trigger: TCTCCAAACCCTCAAATGTCCAGTCATGCTATCCCAAACTCTCCAATGGCACCATCCCCAAGCTTGCTGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
3UTR CCA 72 bp CTAAGTACAGAGCAATGTGTCGTGGAACAGCAAGCTTaGGGATGGTGCCATTGGAGAGTTTGGGATAGCATG +
Preference number: 3 (lower is better)
Translates to: LSTEQCVVEQQA*GWCHWRVWDSM
Trigger: CATGCTATCCCAAACTCTCCAATGGCACCATCCCCAAGCTTGCTGTTCCACGACACATTGCTCTGTACTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
3UTR CCA 72 bp ATTGCCTGCAAGCTGTTATACTGGAGCAGGAGAATATaGTATCTTGACGGAAGCACACTTGCTACCCCACAC +
Preference number: 3 (lower is better)
Translates to: IACKLLYWSRRI*YLDGSTLATPH
Trigger: GTGTGGGGTAGCAAGTGTGCTTCCGTCAAGATACCATATTCTCCTGCTCCAGTATAACAGCTTGCAGGCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
3UTR-3UTR CAA 90 bp TTACTAAGTACAGAGCAATGTGTCGTGGAACAGCAAGCTTGGGGATGGTGCCATGGAGAATATGGTATCTaGACGGAAGCACACTTGCTA +
Preference number: 3 (lower is better)
Translates to: LLSTEQCVVEQQAWGWCHGEYGI*TEAHLL
Trigger: TAGCAAGTGTGCTTCCGTCAAGATACCATATTCTCC...ATGGCACCATCCCCAAGCTTGCTGTTCCACGACACATTGCTCTGTACTTAGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
3UTR-3UTR CAA 90 bp AGATTTTTATTGCCTGCAAGCTGTTATACTGGAGCAGGAGAATATGGTATCTTGAAGGATACGACAGTGTaGGTGCAGTGGTCCGAACTG +
Preference number: 3 (lower is better)
Translates to: RFLLPASCYTGAGEYGILKDTTV*VQWSEL
Trigger: CAGTTCGGACCACTGCACCAACACTGTCGTATCCTT...CAAGATACCATATTCTCCTGCTCCAGTATAACAGCTTGCAGGCAATAAAAATCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
3UTR-3UTR CAA 90 bp GAAGGAAGAAATTTCCTTGTTTGTTATCTTAGCCCTAGGGCCCAGAAAATGAGCGGAGAATATGGTATCTaGACGGAAGCACACTTGCTA +
Preference number: 3 (lower is better)
Translates to: EGRNFLVCYLSPRAQKMSGEYGI*TEAHLL
Trigger: TAGCAAGTGTGCTTCCGTCAAGATACCATATTCTCC...GCTCATTTTCTGGGCCCTAGGGCTAAGATAACAAACAAGGAAATTTCTTCCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
3UTR TCA 72 bp ACAAGGATACGACAGTGTTGGTGCAGTGGTCCGAACTaGCTTCTCACAATGCTGCATTATGAGAAATATGTA +
Preference number: 3 (lower is better)
Translates to: TRIRQCWCSGPN*LLTMLHYEKYV
Trigger: TACATATTTCTCATAATGCAGCATTGTGAGAAGTCAGTTCGGACCACTGCACCAACACTGTCGTATCCTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
3UTR GCA 72 bp GTTGGTGCAGTGGTCCGAACTGACTTCTCACAATGCTaGATTATGAGAAATATGTATCTCGCTTTACACAGA +
Preference number: 3 (lower is better)
Translates to: VGAVVRTDFSQC*IMRNMYLALHR
Trigger: TCTGTGTAAAGCGAGATACATATTTCTCATAATGCAGCATTGTGAGAAGTCAGTTCGGACCACTGCACCAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
3UTR GCA 72 bp AGTGTTGGTGCAGTGGTCCGAACTGACTTCTCACAATaGTGCATTATGAGAAATATGTATCTCGCTTTACAC +
Preference number: 3 (lower is better)
Translates to: SVGAVVRTDFSQ*CIMRNMYLALH
Trigger: GTGTAAAGCGAGATACATATTTCTCATAATGCAGCATTGTGAGAAGTCAGTTCGGACCACTGCACCAACACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
3UTR-3UTR CAA 90 bp TTGGATAATCTAGTCTATATTTGGGTTTGGCAATCCTTTCATCCCAGGAATATAAAGGATACGACAGTGTaGGTGCAGTGGTCCGAACTG +
Preference number: 3 (lower is better)
Translates to: LDNLVYIWVWQSFHPRNIKDTTV*VQWSEL
Trigger: CAGTTCGGACCACTGCACCAACACTGTCGTATCCTT...TATATTCCTGGGATGAAAGGATTGCCAAACCCAAATATAGACTAGATTATCCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
3UTR-3UTR CAA 90 bp ATTTTTATTGCCTGCAAGCTGTTATACTGGAGCAGGAGAATATGGTATCTTGACAGTCTATATTTGGGTTaGGCAATCCTTTCATCCCAG +
Preference number: 3 (lower is better)
Translates to: IFIACKLLYWSRRIWYLDSLYLG*AILSSQ
Trigger: CTGGGATGAAAGGATTGCCAAACCCAAATATAGACT...GTCAAGATACCATATTCTCCTGCTCCAGTATAACAGCTTGCAGGCAATAAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
3UTR CCA 72 bp ACAAACCCATTGGATAATCTAGTCTATATTTGGGTTTaGCAATCCTTTCATCCCAGGAATATACCTGTAGAC +
Preference number: 3 (lower is better)
Translates to: TNPLDNLVYIWV*QSFHPRNIPVD
Trigger: GTCTACAGGTATATTCCTGGGATGAAAGGATTGCCAAACCCAAATATAGACTAGATTATCCAATGGGTTTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR CCA 90 bp GACAGTGTTGGTGCAGTGGTCCGAACTGACTTCTCACAATGCTGCATTATGAGATCGTCCAGCTGCCGCTaGGGCTCGTCTCGCCCCTCG +
Preference number: 4 (lower is better)
Translates to: DSVGAVVRTDFSQCCIMRSSSCR*GSSRPS
Trigger: CGAGGGGCGAGACGAGCCCCAGCGGCAGCTGGACGA...TCTCATAATGCAGCATTGTGAGAAGTCAGTTCGGACCACTGCACCAACACTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR GCA 90 bp GAATATGGTATCTTGACGGAAGCACACTTGCTACCCCACACCTGGGGATTACTTACGGGTCCAGCATGGTaGTCGGGGATCCCCGCCGCT +
Preference number: 4 (lower is better)
Translates to: EYGILTEAHLLPHTWGLLTGPAW*SGIPAA
Trigger: AGCGGCGGGGATCCCCGAGCACCATGCTGGACCCGT...AAGTAATCCCCAGGTGTGGGGTAGCAAGTGTGCTTCCGTCAAGATACCATATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR GCA 90 bp TTACTAAGTACAGAGCAATGTGTCGTGGAACAGCAAGCTTGGGGATGGTGCCATCTGCGAGCTGCCGGCTaGCACCAGCACATCGCGGCT +
Preference number: 4 (lower is better)
Translates to: LLSTEQCVVEQQAWGWCHLRAAG*HQHIAA
Trigger: AGCCGCGATGTGCTGGTGGCAGCCGGCAGCTCGCAG...ATGGCACCATCCCCAAGCTTGCTGTTCCACGACACATTGCTCTGTACTTAGTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR GCA 90 bp CATTTTAACAAGGATACGACAGTGTTGGTGCAGTGGTCCGAACTGACTTCTCACGCTGGAGGAGCTCGCTaGGAGCTGCCGGCTGCCACC +
Preference number: 4 (lower is better)
Translates to: HFNKDTTVLVQWSELTSHAGGAR*ELPAAT
Trigger: GGTGGCAGCCGGCAGCTCGCAGCGAGCTCCTCCAGC...GTGAGAAGTCAGTTCGGACCACTGCACCAACACTGTCGTATCCTTGTTAAAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR GCA 90 bp GGTGCAGTGGTCCGAACTGACTTCTCACAATGCTGCATTATGAGAAATATGTATGGGCGCCTCAGGAATTaGTCCGCCAGCCCCGGGCGC +
Preference number: 4 (lower is better)
Translates to: GAVVRTDFSQCCIMRNMYGRLRN*SASPGR
Trigger: GCGCCCGGGGCTGGCGGAGCAATTCCTGAGGCGCCC...ATACATATTTCTCATAATGCAGCATTGTGAGAAGTCAGTTCGGACCACTGCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000615869.4
CDS-3UTR GCA 90 bp ATATGGTATCTTGACGGAAGCACACTTGCTACCCCACACCTGGGGATTACTTATCTGCGAGCTGCCGGCTaGCACCAGCACATCGCGGCT +
Preference number: 4 (lower is better)
Translates to: IWYLDGSTLATPHLGITYLRAAG*HQHIAA
Trigger: AGCCGCGATGTGCTGGTGGCAGCCGGCAGCTCGCAG...ATAAGTAATCCCCAGGTGTGGGGTAGCAAGTGTGCTTCCGTCAAGATACCATAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR GCA 90 bp GAATATGGTATCTTGACGGAAGCACACTTGCTACCCCACACCTGGGGATTACTTGAGCTCGCTGCGAGCTaGCGGCTGCCACCAGCACAT +
Preference number: 4 (lower is better)
Translates to: EYGILTEAHLLPHTWGLLELAAS*RLPPAH
Trigger: ATGTGCTGGTGGCAGCCGGCAGCTCGCAGCGAGCTC...AAGTAATCCCCAGGTGTGGGGTAGCAAGTGTGCTTCCGTCAAGATACCATATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR GCA 90 bp TTACTAAGTACAGAGCAATGTGTCGTGGAACAGCAAGCTTGGGGATGGTGCCATGAGCTCGCTGCGAGCTaGCGGCTGCCACCAGCACAT +
Preference number: 4 (lower is better)
Translates to: LLSTEQCVVEQQAWGWCHELAAS*RLPPAH
Trigger: ATGTGCTGGTGGCAGCCGGCAGCTCGCAGCGAGCTC...ATGGCACCATCCCCAAGCTTGCTGTTCCACGACACATTGCTCTGTACTTAGTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR GCA 90 bp TGCCATTGGAGAGTTTGGGATAGCATGACTGGACATTTGAGGGTTTGGAGAAAAGCTGGAGGAGCTCGCTaGGAGCTGCCGGCTGCCACC +
Preference number: 4 (lower is better)
Translates to: CHWRVWDSMTGHLRVWRKAGGAR*ELPAAT
Trigger: GGTGGCAGCCGGCAGCTCGCAGCGAGCTCCTCCAGC...TTTTCTCCAAACCCTCAAATGTCCAGTCATGCTATCCCAAACTCTCCAATGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR GCA 90 bp GACAGTGTTGGTGCAGTGGTCCGAACTGACTTCTCACAATGCTGCATTATGAGATGCTCATCGTCCAGCTaGCGCTGGGGCTCGTCTCGC +
Preference number: 4 (lower is better)
Translates to: DSVGAVVRTDFSQCCIMRCSSSS*RWGSSR
Trigger: GCGAGACGAGCCCCAGCGGCAGCTGGACGATGAGCA...TCTCATAATGCAGCATTGTGAGAAGTCAGTTCGGACCACTGCACCAACACTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CCA 90 bp GACAGTGTTGGTGCAGTGGTCCGAACTGACTTCTCACAATGCTGCATTATGAGATTCCCGAGTCGGGGCTaGAGGAGCTCGCTGCGAGCT +
Preference number: 4 (lower is better)
Translates to: DSVGAVVRTDFSQCCIMRFPSRG*RSSLRA
Trigger: AGCTCGCAGCGAGCTCCTCCAGCCCCGACTCGGGAA...TCTCATAATGCAGCATTGTGAGAAGTCAGTTCGGACCACTGCACCAACACTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR TCA 90 bp TTTTTATTGCCTGCAAGCTGTTATACTGGAGCAGGAGAATATGGTATCTTGACGCGTCTCGCCCCTCGCTaGGCACAGAGGGGCTCGGGC +
Preference number: 4 (lower is better)
Translates to: FLLPASCYTGAGEYGILTRLAPR*AQRGSG
Trigger: GCCCGAGCCCCTCTGTGCTCAGCGAGGGGCGAGACG...CGTCAAGATACCATATTCTCCTGCTCCAGTATAACAGCTTGCAGGCAATAAAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR GCA 90 bp CATTTTAACAAGGATACGACAGTGTTGGTGCAGTGGTCCGAACTGACTTCTCACGAGCTCGCTGCGAGCTaGCGGCTGCCACCAGCACAT +
Preference number: 4 (lower is better)
Translates to: HFNKDTTVLVQWSELTSHELAAS*RLPPAH
Trigger: ATGTGCTGGTGGCAGCCGGCAGCTCGCAGCGAGCTC...GTGAGAAGTCAGTTCGGACCACTGCACCAACACTGTCGTATCCTTGTTAAAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR GCA 90 bp GAAGGAAGAAATTTCCTTGTTTGTTATCTTAGCCCTAGGGCCCAGAAAATGAGCGCTGGAGGAGCTCGCTaGGAGCTGCCGGCTGCCACC +
Preference number: 4 (lower is better)
Translates to: EGRNFLVCYLSPRAQKMSAGGAR*ELPAAT
Trigger: GGTGGCAGCCGGCAGCTCGCAGCGAGCTCCTCCAGC...GCTCATTTTCTGGGCCCTAGGGCTAAGATAACAAACAAGGAAATTTCTTCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR GCA 90 bp GGTGCAGTGGTCCGAACTGACTTCTCACAATGCTGCATTATGAGAAATATGTATGCTGGAGGAGCTCGCTaGGAGCTGCCGGCTGCCACC +
Preference number: 4 (lower is better)
Translates to: GAVVRTDFSQCCIMRNMYAGGAR*ELPAAT
Trigger: GGTGGCAGCCGGCAGCTCGCAGCGAGCTCCTCCAGC...ATACATATTTCTCATAATGCAGCATTGTGAGAAGTCAGTTCGGACCACTGCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000615869.4
CDS-3UTR GCA 90 bp TGTTATACTGGAGCAGGAGAATATGGTATCTTGACGGAAGCACACTTGCTACCCTGCTCATCGTCCAGCTaGCGCTGGGGCTCGTCTCGC +
Preference number: 4 (lower is better)
Translates to: CYTGAGEYGILTEAHLLPCSSSS*RWGSSR
Trigger: GCGAGACGAGCCCCAGCGGCAGCTGGACGATGAGCA...GGGTAGCAAGTGTGCTTCCGTCAAGATACCATATTCTCCTGCTCCAGTATAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR GCA 90 bp ATATGGTATCTTGACGGAAGCACACTTGCTACCCCACACCTGGGGATTACTTATCGGATCCTCCGCTCCTaGTCATCGTCCAGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: IWYLDGSTLATPHLGITYRILRS*SSSSCR
Trigger: GCGGCAGCTGGACGATGAGCAGGAGCGGAGGATCCG...ATAAGTAATCCCCAGGTGTGGGGTAGCAAGTGTGCTTCCGTCAAGATACCATAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CCA 90 bp ATATGGTATCTTGACGGAAGCACACTTGCTACCCCACACCTGGGGATTACTTATAAGACGGGTCCAGCATaGTGCTCGGGGATCCCCGCC +
Preference number: 4 (lower is better)
Translates to: IWYLDGSTLATPHLGITYKTGPA*CSGIPA
Trigger: GGCGGGGATCCCCGAGCACCATGCTGGACCCGTCTT...ATAAGTAATCCCCAGGTGTGGGGTAGCAAGTGTGCTTCCGTCAAGATACCATAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CCA 90 bp GAAGGAAGAAATTTCCTTGTTTGTTATCTTAGCCCTAGGGCCCAGAAAATGAGCTCGTCCAGCTGCCGCTaGGGCTCGTCTCGCCCCTCG +
Preference number: 4 (lower is better)
Translates to: EGRNFLVCYLSPRAQKMSSSSCR*GSSRPS
Trigger: CGAGGGGCGAGACGAGCCCCAGCGGCAGCTGGACGA...GCTCATTTTCTGGGCCCTAGGGCTAAGATAACAAACAAGGAAATTTCTTCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR TCA 90 bp ATATGGTATCTTGACGGAAGCACACTTGCTACCCCACACCTGGGGATTACTTATGGGAGCCGCCGGGACTaGATAGGCGGAGTTAGCGTT +
Preference number: 4 (lower is better)
Translates to: IWYLDGSTLATPHLGITYGSRRD*IGGVSV
Trigger: AACGCTAACTCCGCCTATTCAGTCCCGGCGGCTCCC...ATAAGTAATCCCCAGGTGTGGGGTAGCAAGTGTGCTTCCGTCAAGATACCATAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000615869.4
CDS-3UTR TCA 90 bp TCATGTTCTGATCACAAGCAGAGCCAAGGTTCATTTTTAGGTCAAACTACACAACGTCTCGCCCCTCGCTaGGCACAGAGGGGCTCGGGC +
Preference number: 4 (lower is better)
Translates to: SCSDHKQSQGSFLGQTTQRLAPR*AQRGSG
Trigger: GCCCGAGCCCCTCTGTGCTCAGCGAGGGGCGAGACG...TTGTGTAGTTTGACCTAAAAATGAACCTTGGCTCTGCTTGTGATCAGAACATGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000615869.4
CDS-3UTR GCA 90 bp CCATTGGATAATCTAGTCTATATTTGGGTTTGGCAATCCTTTCATCCCAGGAATGGGCGCCTCAGGAATTaGTCCGCCAGCCCCGGGCGC +
Preference number: 4 (lower is better)
Translates to: PLDNLVYIWVWQSFHPRNGRLRN*SASPGR
Trigger: GCGCCCGGGGCTGGCGGAGCAATTCCTGAGGCGCCC...ATTCCTGGGATGAAAGGATTGCCAAACCCAAATATAGACTAGATTATCCAATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000615869.4
CDS-3UTR GCA 90 bp GTTGGTGCAGTGGTCCGAACTGACTTCTCACAATGCTGCATTATGAGAAATATGGAGCTCGCTGCGAGCTaGCGGCTGCCACCAGCACAT +
Preference number: 4 (lower is better)
Translates to: VGAVVRTDFSQCCIMRNMELAAS*RLPPAH
Trigger: ATGTGCTGGTGGCAGCCGGCAGCTCGCAGCGAGCTC...CATATTTCTCATAATGCAGCATTGTGAGAAGTCAGTTCGGACCACTGCACCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CCA 90 bp TGCCATTGGAGAGTTTGGGATAGCATGACTGGACATTTGAGGGTTTGGAGAAAATTCCCGAGTCGGGGCTaGAGGAGCTCGCTGCGAGCT +
Preference number: 4 (lower is better)
Translates to: CHWRVWDSMTGHLRVWRKFPSRG*RSSLRA
Trigger: AGCTCGCAGCGAGCTCCTCCAGCCCCGACTCGGGAA...TTTTCTCCAAACCCTCAAATGTCCAGTCATGCTATCCCAAACTCTCCAATGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CCA 90 bp TTTTTATTGCCTGCAAGCTGTTATACTGGAGCAGGAGAATATGGTATCTTGACGTCGTCCAGCTGCCGCTaGGGCTCGTCTCGCCCCTCG +
Preference number: 4 (lower is better)
Translates to: FLLPASCYTGAGEYGILTSSSCR*GSSRPS
Trigger: CGAGGGGCGAGACGAGCCCCAGCGGCAGCTGGACGA...CGTCAAGATACCATATTCTCCTGCTCCAGTATAACAGCTTGCAGGCAATAAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR GCA 90 bp GAAGGAAGAAATTTCCTTGTTTGTTATCTTAGCCCTAGGGCCCAGAAAATGAGCTGCTCATCGTCCAGCTaGCGCTGGGGCTCGTCTCGC +
Preference number: 4 (lower is better)
Translates to: EGRNFLVCYLSPRAQKMSCSSSS*RWGSSR
Trigger: GCGAGACGAGCCCCAGCGGCAGCTGGACGATGAGCA...GCTCATTTTCTGGGCCCTAGGGCTAAGATAACAAACAAGGAAATTTCTTCCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR GCA 90 bp GGTGCAGTGGTCCGAACTGACTTCTCACAATGCTGCATTATGAGAAATATGTATTGCTCATCGTCCAGCTaGCGCTGGGGCTCGTCTCGC +
Preference number: 4 (lower is better)
Translates to: GAVVRTDFSQCCIMRNMYCSSSS*RWGSSR
Trigger: GCGAGACGAGCCCCAGCGGCAGCTGGACGATGAGCA...ATACATATTTCTCATAATGCAGCATTGTGAGAAGTCAGTTCGGACCACTGCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000615869.4
CDS-3UTR GCA 90 bp GGTGCAGTGGTCCGAACTGACTTCTCACAATGCTGCATTATGAGAAATATGTATCGGATCCTCCGCTCCTaGTCATCGTCCAGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: GAVVRTDFSQCCIMRNMYRILRS*SSSSCR
Trigger: GCGGCAGCTGGACGATGAGCAGGAGCGGAGGATCCG...ATACATATTTCTCATAATGCAGCATTGTGAGAAGTCAGTTCGGACCACTGCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CCA 90 bp GAAGGAAGAAATTTCCTTGTTTGTTATCTTAGCCCTAGGGCCCAGAAAATGAGCAAGACGGGTCCAGCATaGTGCTCGGGGATCCCCGCC +
Preference number: 4 (lower is better)
Translates to: EGRNFLVCYLSPRAQKMSKTGPA*CSGIPA
Trigger: GGCGGGGATCCCCGAGCACCATGCTGGACCCGTCTT...GCTCATTTTCTGGGCCCTAGGGCTAAGATAACAAACAAGGAAATTTCTTCCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CCA 90 bp GAAGGAAGAAATTTCCTTGTTTGTTATCTTAGCCCTAGGGCCCAGAAAATGAGCTTCCCGAGTCGGGGCTaGAGGAGCTCGCTGCGAGCT +
Preference number: 4 (lower is better)
Translates to: EGRNFLVCYLSPRAQKMSFPSRG*RSSLRA
Trigger: AGCTCGCAGCGAGCTCCTCCAGCCCCGACTCGGGAA...GCTCATTTTCTGGGCCCTAGGGCTAAGATAACAAACAAGGAAATTTCTTCCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CCA 90 bp AGATTTTTATTGCCTGCAAGCTGTTATACTGGAGCAGGAGAATATGGTATCTTGTCGTCCAGCTGCCGCTaGGGCTCGTCTCGCCCCTCG +
Preference number: 4 (lower is better)
Translates to: RFLLPASCYTGAGEYGILSSSCR*GSSRPS
Trigger: CGAGGGGCGAGACGAGCCCCAGCGGCAGCTGGACGA...CAAGATACCATATTCTCCTGCTCCAGTATAACAGCTTGCAGGCAATAAAAATCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR TCA 90 bp GGTGCAGTGGTCCGAACTGACTTCTCACAATGCTGCATTATGAGAAATATGTATCCCCCATTGTGGCCTTaGGGCTTCGGCCTGGTCTGT +
Preference number: 4 (lower is better)
Translates to: GAVVRTDFSQCCIMRNMYPPLWP*GFGLVC
Trigger: ACAGACCAGGCCGAAGCCTCAAGGCCACAATGGGGG...ATACATATTTCTCATAATGCAGCATTGTGAGAAGTCAGTTCGGACCACTGCACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000615869.4
CDS-3UTR TCA 90 bp TGTTATACTGGAGCAGGAGAATATGGTATCTTGACGGAAGCACACTTGCTACCCGAGGATGGGTGGTGGTaGAATCTCCTTGAGTCCCCC +
Preference number: 4 (lower is better)
Translates to: CYTGAGEYGILTEAHLLPEDGWW*NLLESP
Trigger: GGGGGACTCAAGGAGATTTCACCACCACCCATCCTC...GGGTAGCAAGTGTGCTTCCGTCAAGATACCATATTCTCCTGCTCCAGTATAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR TCA 90 bp ATATGGTATCTTGACGGAAGCACACTTGCTACCCCACACCTGGGGATTACTTATAACATACAACCACCCTaGAGGCCTGGGTGGGGATCG +
Preference number: 4 (lower is better)
Translates to: IWYLDGSTLATPHLGITYNIQPP*RPGWGS
Trigger: CGATCCCCACCCAGGCCTTCAGGGTGGTTGTATGTT...ATAAGTAATCCCCAGGTGTGGGGTAGCAAGTGTGCTTCCGTCAAGATACCATAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR GCA 90 bp GACTTCTCACAATGCTGCATTATGAGAAATATGTATCTCGCTTTACACAGAAAAGGGCGCCTCAGGAATTaGTCCGCCAGCCCCGGGCGC +
Preference number: 4 (lower is better)
Translates to: DFSQCCIMRNMYLALHRKGRLRN*SASPGR
Trigger: GCGCCCGGGGCTGGCGGAGCAATTCCTGAGGCGCCC...TTTTCTGTGTAAAGCGAGATACATATTTCTCATAATGCAGCATTGTGAGAAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000615869.4
CDS-3UTR GCA 90 bp AGATTTTTATTGCCTGCAAGCTGTTATACTGGAGCAGGAGAATATGGTATCTTGACGGGTCCAGCATGGTaGTCGGGGATCCCCGCCGCT +
Preference number: 4 (lower is better)
Translates to: RFLLPASCYTGAGEYGILTGPAW*SGIPAA
Trigger: AGCGGCGGGGATCCCCGAGCACCATGCTGGACCCGT...CAAGATACCATATTCTCCTGCTCCAGTATAACAGCTTGCAGGCAATAAAAATCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR GCA 90 bp TTTTTATTGCCTGCAAGCTGTTATACTGGAGCAGGAGAATATGGTATCTTGACGTGCTCATCGTCCAGCTaGCGCTGGGGCTCGTCTCGC +
Preference number: 4 (lower is better)
Translates to: FLLPASCYTGAGEYGILTCSSSS*RWGSSR
Trigger: GCGAGACGAGCCCCAGCGGCAGCTGGACGATGAGCA...CGTCAAGATACCATATTCTCCTGCTCCAGTATAACAGCTTGCAGGCAATAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CCA 90 bp GACAGTGTTGGTGCAGTGGTCCGAACTGACTTCTCACAATGCTGCATTATGAGACAGGTGGGGAACCTGTaGCGCCTACAACAAGCAACA +
Preference number: 4 (lower is better)
Translates to: DSVGAVVRTDFSQCCIMRQVGNL*RLQQAT
Trigger: TGTTGCTTGTTGTAGGCGCCACAGGTTCCCCACCTG...TCTCATAATGCAGCATTGTGAGAAGTCAGTTCGGACCACTGCACCAACACTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000615869.4
CDS-3UTR CCA 90 bp ACTGACTTCTCACAATGCTGCATTATGAGAAATATGTATCTCGCTTTACACAGATCGTCCAGCTGCCGCTaGGGCTCGTCTCGCCCCTCG +
Preference number: 4 (lower is better)
Translates to: TDFSQCCIMRNMYLALHRSSSCR*GSSRPS
Trigger: CGAGGGGCGAGACGAGCCCCAGCGGCAGCTGGACGA...TCTGTGTAAAGCGAGATACATATTTCTCATAATGCAGCATTGTGAGAAGTCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000615869.4
3UTR CAA 72 bp GCAAGCTGTTATACTGGAGCAGGAGAATATGGTATCTaGACGGAAGCACACTTGCTACCCCACACCTGGGGA +
Preference number: 4 (lower is better)
Translates to: ASCYTGAGEYGI*TEAHLLPHTWG
Trigger: TCCCCAGGTGTGGGGTAGCAAGTGTGCTTCCGTCAAGATACCATATTCTCCTGCTCCAGTATAACAGCTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR TCA 90 bp TTTTTATTGCCTGCAAGCTGTTATACTGGAGCAGGAGAATATGGTATCTTGACGGGGAGCCGCCGGGACTaGATAGGCGGAGTTAGCGTT +
Preference number: 4 (lower is better)
Translates to: FLLPASCYTGAGEYGILTGSRRD*IGGVSV
Trigger: AACGCTAACTCCGCCTATTCAGTCCCGGCGGCTCCC...CGTCAAGATACCATATTCTCCTGCTCCAGTATAACAGCTTGCAGGCAATAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000615869.4
CDS-3UTR TCA 90 bp TTACTAAGTACAGAGCAATGTGTCGTGGAACAGCAAGCTTGGGGATGGTGCCATTCGATTGGGAGCAACTaGCTTCAGGCCTTGCACTTC +
Preference number: 4 (lower is better)
Translates to: LLSTEQCVVEQQAWGWCHSIGSN*LQALHF
Trigger: GAAGTGCAAGGCCTGAAGTCAGTTGCTCCCAATCGA...ATGGCACCATCCCCAAGCTTGCTGTTCCACGACACATTGCTCTGTACTTAGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR TCA 90 bp GACAGTGTTGGTGCAGTGGTCCGAACTGACTTCTCACAATGCTGCATTATGAGATCGATTGGGAGCAACTaGCTTCAGGCCTTGCACTTC +
Preference number: 4 (lower is better)
Translates to: DSVGAVVRTDFSQCCIMRSIGSN*LQALHF
Trigger: GAAGTGCAAGGCCTGAAGTCAGTTGCTCCCAATCGA...TCTCATAATGCAGCATTGTGAGAAGTCAGTTCGGACCACTGCACCAACACTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR TCA 90 bp TTTTTATTGCCTGCAAGCTGTTATACTGGAGCAGGAGAATATGGTATCTTGACGCCCCCATTGTGGCCTTaGGGCTTCGGCCTGGTCTGT +
Preference number: 4 (lower is better)
Translates to: FLLPASCYTGAGEYGILTPPLWP*GFGLVC
Trigger: ACAGACCAGGCCGAAGCCTCAAGGCCACAATGGGGG...CGTCAAGATACCATATTCTCCTGCTCCAGTATAACAGCTTGCAGGCAATAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR TCA 90 bp GAATATGGTATCTTGACGGAAGCACACTTGCTACCCCACACCTGGGGATTACTTCTGTTGCCGTGCACATaGGAGGCACAGAATGCAAAG +
Preference number: 4 (lower is better)
Translates to: EYGILTEAHLLPHTWGLLLLPCT*EAQNAK
Trigger: CTTTGCATTCTGTGCCTCTCATGTGCACGGCAACAG...AAGTAATCCCCAGGTGTGGGGTAGCAAGTGTGCTTCCGTCAAGATACCATATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR GCA 90 bp ACTGACTTCTCACAATGCTGCATTATGAGAAATATGTATCTCGCTTTACACAGACTGCGAGCTGCCGGCTaGCACCAGCACATCGCGGCT +
Preference number: 4 (lower is better)
Translates to: TDFSQCCIMRNMYLALHRLRAAG*HQHIAA
Trigger: AGCCGCGATGTGCTGGTGGCAGCCGGCAGCTCGCAG...TCTGTGTAAAGCGAGATACATATTTCTCATAATGCAGCATTGTGAGAAGTCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000615869.4
CDS-3UTR GCA 90 bp TCATGTTCTGATCACAAGCAGAGCCAAGGTTCATTTTTAGGTCAAACTACACAAGAGCTCGCTGCGAGCTaGCGGCTGCCACCAGCACAT +
Preference number: 4 (lower is better)
Translates to: SCSDHKQSQGSFLGQTTQELAAS*RLPPAH
Trigger: ATGTGCTGGTGGCAGCCGGCAGCTCGCAGCGAGCTC...TTGTGTAGTTTGACCTAAAAATGAACCTTGGCTCTGCTTGTGATCAGAACATGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000615869.4
CDS-3UTR GCA 90 bp GACTTCTCACAATGCTGCATTATGAGAAATATGTATCTCGCTTTACACAGAAAAGCTGGAGGAGCTCGCTaGGAGCTGCCGGCTGCCACC +
Preference number: 4 (lower is better)
Translates to: DFSQCCIMRNMYLALHRKAGGAR*ELPAAT
Trigger: GGTGGCAGCCGGCAGCTCGCAGCGAGCTCCTCCAGC...TTTTCTGTGTAAAGCGAGATACATATTTCTCATAATGCAGCATTGTGAGAAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000615869.4
CDS-3UTR GCA 90 bp ATATGGTATCTTGACGGAAGCACACTTGCTACCCCACACCTGGGGATTACTTATTTCCATCAGGCCTGTTaGCGTGCACATGAGAGGCAC +
Preference number: 4 (lower is better)
Translates to: IWYLDGSTLATPHLGITYFHQAC*RAHERH
Trigger: GTGCCTCTCATGTGCACGGCAACAGGCCTGATGGAA...ATAAGTAATCCCCAGGTGTGGGGTAGCAAGTGTGCTTCCGTCAAGATACCATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CCA 90 bp TCATGTTCTGATCACAAGCAGAGCCAAGGTTCATTTTTAGGTCAAACTACACAAAAGACGGGTCCAGCATaGTGCTCGGGGATCCCCGCC +
Preference number: 4 (lower is better)
Translates to: SCSDHKQSQGSFLGQTTQKTGPA*CSGIPA
Trigger: GGCGGGGATCCCCGAGCACCATGCTGGACCCGTCTT...TTGTGTAGTTTGACCTAAAAATGAACCTTGGCTCTGCTTGTGATCAGAACATGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CCA 90 bp TCATGTTCTGATCACAAGCAGAGCCAAGGTTCATTTTTAGGTCAAACTACACAATTCCCGAGTCGGGGCTaGAGGAGCTCGCTGCGAGCT +
Preference number: 4 (lower is better)
Translates to: SCSDHKQSQGSFLGQTTQFPSRG*RSSLRA
Trigger: AGCTCGCAGCGAGCTCCTCCAGCCCCGACTCGGGAA...TTGTGTAGTTTGACCTAAAAATGAACCTTGGCTCTGCTTGTGATCAGAACATGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CCA 90 bp TGTTATACTGGAGCAGGAGAATATGGTATCTTGACGGAAGCACACTTGCTACCCACCACAGGCCGAGGATaGGTGGTGGTGAAATCTCCT +
Preference number: 4 (lower is better)
Translates to: CYTGAGEYGILTEAHLLPTTGRG*VVVKSP
Trigger: AGGAGATTTCACCACCACCCATCCTCGGCCTGTGGT...GGGTAGCAAGTGTGCTTCCGTCAAGATACCATATTCTCCTGCTCCAGTATAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CCA 90 bp TGTTATACTGGAGCAGGAGAATATGGTATCTTGACGGAAGCACACTTGCTACCCACCACCCTGAAGGCCTaGGTGGGGATCGGTATAATC +
Preference number: 4 (lower is better)
Translates to: CYTGAGEYGILTEAHLLPTTLKA*VGIGII
Trigger: GATTATACCGATCCCCACCCAGGCCTTCAGGGTGGT...GGGTAGCAAGTGTGCTTCCGTCAAGATACCATATTCTCCTGCTCCAGTATAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CCA 90 bp ATATGGTATCTTGACGGAAGCACACTTGCTACCCCACACCTGGGGATTACTTATACCACCCTGAAGGCCTaGGTGGGGATCGGTATAATC +
Preference number: 4 (lower is better)
Translates to: IWYLDGSTLATPHLGITYTTLKA*VGIGII
Trigger: GATTATACCGATCCCCACCCAGGCCTTCAGGGTGGT...ATAAGTAATCCCCAGGTGTGGGGTAGCAAGTGTGCTTCCGTCAAGATACCATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CCA 90 bp TTACTAAGTACAGAGCAATGTGTCGTGGAACAGCAAGCTTGGGGATGGTGCCATCAGCAAGCTTGGGGATaGTGCCATTGGAGAGTTTGG +
Preference number: 4 (lower is better)
Translates to: LLSTEQCVVEQQAWGWCHQQAWG*CHWRVW
Trigger: CCAAACTCTCCAATGGCACCATCCCCAAGCTTGCTG...ATGGCACCATCCCCAAGCTTGCTGTTCCACGACACATTGCTCTGTACTTAGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CCA 90 bp GAATATGGTATCTTGACGGAAGCACACTTGCTACCCCACACCTGGGGATTACTTGTGGAACAGCAAGCTTaGGGATGGTGCCATTGGAGA +
Preference number: 4 (lower is better)
Translates to: EYGILTEAHLLPHTWGLLVEQQA*GWCHWR
Trigger: TCTCCAATGGCACCATCCCCAAGCTTGCTGTTCCAC...AAGTAATCCCCAGGTGTGGGGTAGCAAGTGTGCTTCCGTCAAGATACCATATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR TCA 90 bp ATTTTTATTGCCTGCAAGCTGTTATACTGGAGCAGGAGAATATGGTATCTTGACGGGAGCCGCCGGGACTaGATAGGCGGAGTTAGCGTT +
Preference number: 4 (lower is better)
Translates to: IFIACKLLYWSRRIWYLDGSRRD*IGGVSV
Trigger: AACGCTAACTCCGCCTATTCAGTCCCGGCGGCTCCC...GTCAAGATACCATATTCTCCTGCTCCAGTATAACAGCTTGCAGGCAATAAAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000615869.4
CDS-3UTR TCA 90 bp TCATGTTCTGATCACAAGCAGAGCCAAGGTTCATTTTTAGGTCAAACTACACAACCCCCATTGTGGCCTTaGGGCTTCGGCCTGGTCTGT +
Preference number: 4 (lower is better)
Translates to: SCSDHKQSQGSFLGQTTQPPLWP*GFGLVC
Trigger: ACAGACCAGGCCGAAGCCTCAAGGCCACAATGGGGG...TTGTGTAGTTTGACCTAAAAATGAACCTTGGCTCTGCTTGTGATCAGAACATGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000615869.4
CDS-3UTR TCA 90 bp ATTTTTATTGCCTGCAAGCTGTTATACTGGAGCAGGAGAATATGGTATCTTGACCCCCCATTGTGGCCTTaGGGCTTCGGCCTGGTCTGT +
Preference number: 4 (lower is better)
Translates to: IFIACKLLYWSRRIWYLDPPLWP*GFGLVC
Trigger: ACAGACCAGGCCGAAGCCTCAAGGCCACAATGGGGG...GTCAAGATACCATATTCTCCTGCTCCAGTATAACAGCTTGCAGGCAATAAAAAT
49% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR TCA 90 bp TGTTATACTGGAGCAGGAGAATATGGTATCTTGACGGAAGCACACTTGCTACCCGTGGTGAAATCTCCTTaGGTCCCCCATTGTGGCCTT +
Preference number: 4 (lower is better)
Translates to: CYTGAGEYGILTEAHLLPVVKSP*VPHCGL
Trigger: AAGGCCACAATGGGGGACTCAAGGAGATTTCACCAC...GGGTAGCAAGTGTGCTTCCGTCAAGATACCATATTCTCCTGCTCCAGTATAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR TCA 90 bp GGTGCAGTGGTCCGAACTGACTTCTCACAATGCTGCATTATGAGAAATATGTATGAGGATGGGTGGTGGTaGAATCTCCTTGAGTCCCCC +
Preference number: 4 (lower is better)
Translates to: GAVVRTDFSQCCIMRNMYEDGWW*NLLESP
Trigger: GGGGGACTCAAGGAGATTTCACCACCACCCATCCTC...ATACATATTTCTCATAATGCAGCATTGTGAGAAGTCAGTTCGGACCACTGCACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000615869.4
CDS-3UTR TCA 90 bp GGTGCAGTGGTCCGAACTGACTTCTCACAATGCTGCATTATGAGAAATATGTATAACATACAACCACCCTaGAGGCCTGGGTGGGGATCG +
Preference number: 4 (lower is better)
Translates to: GAVVRTDFSQCCIMRNMYNIQPP*RPGWGS
Trigger: CGATCCCCACCCAGGCCTTCAGGGTGGTTGTATGTT...ATACATATTTCTCATAATGCAGCATTGTGAGAAGTCAGTTCGGACCACTGCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000615869.4
CDS-3UTR TCA 90 bp TGTTATACTGGAGCAGGAGAATATGGTATCTTGACGGAAGCACACTTGCTACCCCTGTTGCCGTGCACATaGGAGGCACAGAATGCAAAG +
Preference number: 4 (lower is better)
Translates to: CYTGAGEYGILTEAHLLPLLPCT*EAQNAK
Trigger: CTTTGCATTCTGTGCCTCTCATGTGCACGGCAACAG...GGGTAGCAAGTGTGCTTCCGTCAAGATACCATATTCTCCTGCTCCAGTATAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR TCA 90 bp ATATGGTATCTTGACGGAAGCACACTTGCTACCCCACACCTGGGGATTACTTATCTGTTGCCGTGCACATaGGAGGCACAGAATGCAAAG +
Preference number: 4 (lower is better)
Translates to: IWYLDGSTLATPHLGITYLLPCT*EAQNAK
Trigger: CTTTGCATTCTGTGCCTCTCATGTGCACGGCAACAG...ATAAGTAATCCCCAGGTGTGGGGTAGCAAGTGTGCTTCCGTCAAGATACCATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR TCA 90 bp GAATATGGTATCTTGACGGAAGCACACTTGCTACCCCACACCTGGGGATTACTTCGATGGAAGACTCCATaGGATCCACATAGCGGACAA +
Preference number: 4 (lower is better)
Translates to: EYGILTEAHLLPHTWGLLRWKTP*DPHSGQ
Trigger: TTGTCCGCTATGTGGATCTCATGGAGTCTTCCATCG...AAGTAATCCCCAGGTGTGGGGTAGCAAGTGTGCTTCCGTCAAGATACCATATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR TCA 90 bp TTACTAAGTACAGAGCAATGTGTCGTGGAACAGCAAGCTTGGGGATGGTGCCATGCCTTCATCATACCTTaGCAGCTTAGACAACACGCC +
Preference number: 4 (lower is better)
Translates to: LLSTEQCVVEQQAWGWCHAFIIP*QLRQHA
Trigger: GGCGTGTTGTCTAAGCTGTCAAGGTATGATGAAGGC...ATGGCACCATCCCCAAGCTTGCTGTTCCACGACACATTGCTCTGTACTTAGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR GCA 90 bp TTGGATAATCTAGTCTATATTTGGGTTTGGCAATCCTTTCATCCCAGGAATATACTGCGAGCTGCCGGCTaGCACCAGCACATCGCGGCT +
Preference number: 4 (lower is better)
Translates to: LDNLVYIWVWQSFHPRNILRAAG*HQHIAA
Trigger: AGCCGCGATGTGCTGGTGGCAGCCGGCAGCTCGCAG...TATATTCCTGGGATGAAAGGATTGCCAAACCCAAATATAGACTAGATTATCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR GCA 90 bp GACTTCTCACAATGCTGCATTATGAGAAATATGTATCTCGCTTTACACAGAAAACTGCGAGCTGCCGGCTaGCACCAGCACATCGCGGCT +
Preference number: 4 (lower is better)
Translates to: DFSQCCIMRNMYLALHRKLRAAG*HQHIAA
Trigger: AGCCGCGATGTGCTGGTGGCAGCCGGCAGCTCGCAG...TTTTCTGTGTAAAGCGAGATACATATTTCTCATAATGCAGCATTGTGAGAAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000615869.4
CDS-3UTR GCA 90 bp ACTGACTTCTCACAATGCTGCATTATGAGAAATATGTATCTCGCTTTACACAGACGGATCCTCCGCTCCTaGTCATCGTCCAGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: TDFSQCCIMRNMYLALHRRILRS*SSSSCR
Trigger: GCGGCAGCTGGACGATGAGCAGGAGCGGAGGATCCG...TCTGTGTAAAGCGAGATACATATTTCTCATAATGCAGCATTGTGAGAAGTCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000615869.4
CDS-3UTR GCA 90 bp CATTTTAACAAGGATACGACAGTGTTGGTGCAGTGGTCCGAACTGACTTCTCACTGTTTGTTAAGCTTCTaGTGCCTCCGGGCCATGTCG +
Preference number: 4 (lower is better)
Translates to: HFNKDTTVLVQWSELTSHCLLSF*CLRAMS
Trigger: CGACATGGCCCGGAGGCAGCAGAAGCTTAACAAACA...GTGAGAAGTCAGTTCGGACCACTGCACCAACACTGTCGTATCCTTGTTAAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR GCA 90 bp TTACTAAGTACAGAGCAATGTGTCGTGGAACAGCAAGCTTGGGGATGGTGCCATGGCTGCTTGTTCATCTaGGTTATCCAGCTGACATGC +
Preference number: 4 (lower is better)
Translates to: LLSTEQCVVEQQAWGWCHGCLFI*VIQLTC
Trigger: GCATGTCAGCTGGATAACGCAGATGAACAAGCAGCC...ATGGCACCATCCCCAAGCTTGCTGTTCCACGACACATTGCTCTGTACTTAGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR GCA 90 bp TGCCATTGGAGAGTTTGGGATAGCATGACTGGACATTTGAGGGTTTGGAGAAAATTCCATCAGGCCTGTTaGCGTGCACATGAGAGGCAC +
Preference number: 4 (lower is better)
Translates to: CHWRVWDSMTGHLRVWRKFHQAC*RAHERH
Trigger: GTGCCTCTCATGTGCACGGCAACAGGCCTGATGGAA...TTTTCTCCAAACCCTCAAATGTCCAGTCATGCTATCCCAAACTCTCCAATGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR GCA 90 bp CATTTTAACAAGGATACGACAGTGTTGGTGCAGTGGTCCGAACTGACTTCTCACAGGCCACCAGGCAAATaGCTCTGCATGATGCTCTTC +
Preference number: 4 (lower is better)
Translates to: HFNKDTTVLVQWSELTSHRPPGK*LCMMLF
Trigger: GAAGAGCATCATGCAGAGGCATTTGCCTGGTGGCCT...GTGAGAAGTCAGTTCGGACCACTGCACCAACACTGTCGTATCCTTGTTAAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000615869.4
CDS-3UTR GCA 90 bp TTACTAAGTACAGAGCAATGTGTCGTGGAACAGCAAGCTTGGGGATGGTGCCATCAAGCTTGGGGATGGTaGCATTGGAGAGTTTGGGAT +
Preference number: 4 (lower is better)
Translates to: LLSTEQCVVEQQAWGWCHQAWGW*HWRVWD
Trigger: ATCCCAAACTCTCCAATGGCACCATCCCCAAGCTTG...ATGGCACCATCCCCAAGCTTGCTGTTCCACGACACATTGCTCTGTACTTAGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR GCA 90 bp TGCCATTGGAGAGTTTGGGATAGCATGACTGGACATTTGAGGGTTTGGAGAAAAAGGCCACCAGGCAAATaGCTCTCTTCCCTCTGCATG +
Preference number: 4 (lower is better)
Translates to: CHWRVWDSMTGHLRVWRKRPPGK*LSSLCM
Trigger: CATGCAGAGGGAAGAGAGGCATTTGCCTGGTGGCCT...TTTTCTCCAAACCCTCAAATGTCCAGTCATGCTATCCCAAACTCTCCAATGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000449022.7
CDS-3UTR CCA 90 bp TGTTATACTGGAGCAGGAGAATATGGTATCTTGACGGAAGCACACTTGCTACCCGAACGAAAGGAAAACTaGCCAGGGCTTTCCGGACAC +
Preference number: 4 (lower is better)
Translates to: CYTGAGEYGILTEAHLLPERKEN*PGLSGH
Trigger: GTGTCCGGAAAGCCCTGGCCAGTTTTCCTTTCGTTC...GGGTAGCAAGTGTGCTTCCGTCAAGATACCATATTCTCCTGCTCCAGTATAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000615869.4
CDS-3UTR CCA 90 bp GTTGGTGCAGTGGTCCGAACTGACTTCTCACAATGCTGCATTATGAGAAATATGACCACAGGCCGAGGATaGGTGGTGGTGAAATCTCCT +
Preference number: 4 (lower is better)
Translates to: VGAVVRTDFSQCCIMRNMTTGRG*VVVKSP
Trigger: AGGAGATTTCACCACCACCCATCCTCGGCCTGTGGT...CATATTTCTCATAATGCAGCATTGTGAGAAGTCAGTTCGGACCACTGCACCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CCA 90 bp TTACTAAGTACAGAGCAATGTGTCGTGGAACAGCAAGCTTGGGGATGGTGCCATTGGGGATGGTGCCATTaGAGAGTTTGGGATAGCATG +
Preference number: 4 (lower is better)
Translates to: LLSTEQCVVEQQAWGWCHWGWCH*RVWDSM
Trigger: CATGCTATCCCAAACTCTCCAATGGCACCATCCCCA...ATGGCACCATCCCCAAGCTTGCTGTTCCACGACACATTGCTCTGTACTTAGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CCA 90 bp CATTTTAACAAGGATACGACAGTGTTGGTGCAGTGGTCCGAACTGACTTCTCACGTGGAACAGCAAGCTTaGGGATGGTGCCATTGGAGA +
Preference number: 4 (lower is better)
Translates to: HFNKDTTVLVQWSELTSHVEQQA*GWCHWR
Trigger: TCTCCAATGGCACCATCCCCAAGCTTGCTGTTCCAC...GTGAGAAGTCAGTTCGGACCACTGCACCAACACTGTCGTATCCTTGTTAAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CCA 90 bp ATATGGTATCTTGACGGAAGCACACTTGCTACCCCACACCTGGGGATTACTTATGTGGAACAGCAAGCTTaGGGATGGTGCCATTGGAGA +
Preference number: 4 (lower is better)
Translates to: IWYLDGSTLATPHLGITYVEQQA*GWCHWR
Trigger: TCTCCAATGGCACCATCCCCAAGCTTGCTGTTCCAC...ATAAGTAATCCCCAGGTGTGGGGTAGCAAGTGTGCTTCCGTCAAGATACCATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR TCA 90 bp TTTTTATTGCCTGCAAGCTGTTATACTGGAGCAGGAGAATATGGTATCTTGACGGAGGATGGGTGGTGGTaGAATCTCCTTGAGTCCCCC +
Preference number: 4 (lower is better)
Translates to: FLLPASCYTGAGEYGILTEDGWW*NLLESP
Trigger: GGGGGACTCAAGGAGATTTCACCACCACCCATCCTC...CGTCAAGATACCATATTCTCCTGCTCCAGTATAACAGCTTGCAGGCAATAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR TCA 90 bp GTTGGTGCAGTGGTCCGAACTGACTTCTCACAATGCTGCATTATGAGAAATATGCTGTTGCCGTGCACATaGGAGGCACAGAATGCAAAG +
Preference number: 4 (lower is better)
Translates to: VGAVVRTDFSQCCIMRNMLLPCT*EAQNAK
Trigger: CTTTGCATTCTGTGCCTCTCATGTGCACGGCAACAG...CATATTTCTCATAATGCAGCATTGTGAGAAGTCAGTTCGGACCACTGCACCAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR TCA 90 bp CATTTTAACAAGGATACGACAGTGTTGGTGCAGTGGTCCGAACTGACTTCTCACCGATGGAAGACTCCATaGGATCCACATAGCGGACAA +
Preference number: 4 (lower is better)
Translates to: HFNKDTTVLVQWSELTSHRWKTP*DPHSGQ
Trigger: TTGTCCGCTATGTGGATCTCATGGAGTCTTCCATCG...GTGAGAAGTCAGTTCGGACCACTGCACCAACACTGTCGTATCCTTGTTAAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR TCA 90 bp TTACTAAGTACAGAGCAATGTGTCGTGGAACAGCAAGCTTGGGGATGGTGCCATTGCTCAAAACCTCTGTaGATTGACTGGGCGATGGAA +
Preference number: 4 (lower is better)
Translates to: LLSTEQCVVEQQAWGWCHCSKPL*IDWAME
Trigger: TTCCATCGCCCAGTCAATTCACAGAGGTTTTGAGCA...ATGGCACCATCCCCAAGCTTGCTGTTCCACGACACATTGCTCTGTACTTAGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR TCA 90 bp ATATGGTATCTTGACGGAAGCACACTTGCTACCCCACACCTGGGGATTACTTATGCCTTCATCATACCTTaGCAGCTTAGACAACACGCC +
Preference number: 4 (lower is better)
Translates to: IWYLDGSTLATPHLGITYAFIIP*QLRQHA
Trigger: GGCGTGTTGTCTAAGCTGTCAAGGTATGATGAAGGC...ATAAGTAATCCCCAGGTGTGGGGTAGCAAGTGTGCTTCCGTCAAGATACCATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR GCA 90 bp GACTTCTCACAATGCTGCATTATGAGAAATATGTATCTCGCTTTACACAGAAAACGGATCCTCCGCTCCTaGTCATCGTCCAGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: DFSQCCIMRNMYLALHRKRILRS*SSSSCR
Trigger: GCGGCAGCTGGACGATGAGCAGGAGCGGAGGATCCG...TTTTCTGTGTAAAGCGAGATACATATTTCTCATAATGCAGCATTGTGAGAAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000615869.4
CDS-3UTR GCA 90 bp GAAGGAAGAAATTTCCTTGTTTGTTATCTTAGCCCTAGGGCCCAGAAAATGAGCTTGTTAAGCTTCTGCTaGCTCCGGGCCATGTCGGTG +
Preference number: 4 (lower is better)
Translates to: EGRNFLVCYLSPRAQKMSLLSFC*LRAMSV
Trigger: CACCGACATGGCCCGGAGGCAGCAGAAGCTTAACAA...GCTCATTTTCTGGGCCCTAGGGCTAAGATAACAAACAAGGAAATTTCTTCCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR GCA 90 bp TGCCATTGGAGAGTTTGGGATAGCATGACTGGACATTTGAGGGTTTGGAGAAAATGTTTGTTAAGCTTCTaGTGCCTCCGGGCCATGTCG +
Preference number: 4 (lower is better)
Translates to: CHWRVWDSMTGHLRVWRKCLLSF*CLRAMS
Trigger: CGACATGGCCCGGAGGCAGCAGAAGCTTAACAAACA...TTTTCTCCAAACCCTCAAATGTCCAGTCATGCTATCCCAAACTCTCCAATGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR GCA 90 bp GAATATGGTATCTTGACGGAAGCACACTTGCTACCCCACACCTGGGGATTACTTCCTTCTGATCTGGGCTaGTTGTTCATCTGCGTTATC +
Preference number: 4 (lower is better)
Translates to: EYGILTEAHLLPHTWGLLPSDLG*LFICVI
Trigger: GATAACGCAGATGAACAAGCAGCCCAGATCAGAAGG...AAGTAATCCCCAGGTGTGGGGTAGCAAGTGTGCTTCCGTCAAGATACCATATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR GCA 90 bp TTACTAAGTACAGAGCAATGTGTCGTGGAACAGCAAGCTTGGGGATGGTGCCATCTTTGCCATTTTATCTaGCAATTGCAGCCGGCCATC +
Preference number: 4 (lower is better)
Translates to: LLSTEQCVVEQQAWGWCHLCHFI*QLQPAI
Trigger: GATGGCCGGCTGCAATTGGCAGATAAAATGGCAAAG...ATGGCACCATCCCCAAGCTTGCTGTTCCACGACACATTGCTCTGTACTTAGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR GCA 90 bp GAATATGGTATCTTGACGGAAGCACACTTGCTACCCCACACCTGGGGATTACTTCTTTGCCATTTTATCTaGCAATTGCAGCCGGCCATC +
Preference number: 4 (lower is better)
Translates to: EYGILTEAHLLPHTWGLLLCHFI*QLQPAI
Trigger: GATGGCCGGCTGCAATTGGCAGATAAAATGGCAAAG...AAGTAATCCCCAGGTGTGGGGTAGCAAGTGTGCTTCCGTCAAGATACCATATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR GCA 90 bp GGTGCAGTGGTCCGAACTGACTTCTCACAATGCTGCATTATGAGAAATATGTATTTCCATCAGGCCTGTTaGCGTGCACATGAGAGGCAC +
Preference number: 4 (lower is better)
Translates to: GAVVRTDFSQCCIMRNMYFHQAC*RAHERH
Trigger: GTGCCTCTCATGTGCACGGCAACAGGCCTGATGGAA...ATACATATTTCTCATAATGCAGCATTGTGAGAAGTCAGTTCGGACCACTGCACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000615869.4
CDS-3UTR GCA 90 bp TGCCATTGGAGAGTTTGGGATAGCATGACTGGACATTTGAGGGTTTGGAGAAAAAGGCCACCAGGCAAATaGCTCTGCATGATGCTCTTC +
Preference number: 4 (lower is better)
Translates to: CHWRVWDSMTGHLRVWRKRPPGK*LCMMLF
Trigger: GAAGAGCATCATGCAGAGGCATTTGCCTGGTGGCCT...TTTTCTCCAAACCCTCAAATGTCCAGTCATGCTATCCCAAACTCTCCAATGGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000615869.4
CDS-3UTR CCA 90 bp TTGGATAATCTAGTCTATATTTGGGTTTGGCAATCCTTTCATCCCAGGAATATAAAGACGGGTCCAGCATaGTGCTCGGGGATCCCCGCC +
Preference number: 4 (lower is better)
Translates to: LDNLVYIWVWQSFHPRNIKTGPA*CSGIPA
Trigger: GGCGGGGATCCCCGAGCACCATGCTGGACCCGTCTT...TATATTCCTGGGATGAAAGGATTGCCAAACCCAAATATAGACTAGATTATCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CCA 90 bp GACTTCTCACAATGCTGCATTATGAGAAATATGTATCTCGCTTTACACAGAAAAAAGACGGGTCCAGCATaGTGCTCGGGGATCCCCGCC +
Preference number: 4 (lower is better)
Translates to: DFSQCCIMRNMYLALHRKKTGPA*CSGIPA
Trigger: GGCGGGGATCCCCGAGCACCATGCTGGACCCGTCTT...TTTTCTGTGTAAAGCGAGATACATATTTCTCATAATGCAGCATTGTGAGAAGTC
48% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CCA 90 bp TTACTAAGTACAGAGCAATGTGTCGTGGAACAGCAAGCTTGGGGATGGTGCCATCCATTGAGGAAGGCCTaGAACCGTTCTTTCAGTAAC +
Preference number: 4 (lower is better)
Translates to: LLSTEQCVVEQQAWGWCHPLRKA*NRSFSN
Trigger: GTTACTGAAAGAACGGTTCCAGGCCTTCCTCAATGG...ATGGCACCATCCCCAAGCTTGCTGTTCCACGACACATTGCTCTGTACTTAGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CCA 90 bp CATTTTAACAAGGATACGACAGTGTTGGTGCAGTGGTCCGAACTGACTTCTCACAGTTCCCTTCTGATCTaGGCTGCTTGTTCATCTGCG +
Preference number: 4 (lower is better)
Translates to: HFNKDTTVLVQWSELTSHSSLLI*AACSSA
Trigger: CGCAGATGAACAAGCAGCCCAGATCAGAAGGGAACT...GTGAGAAGTCAGTTCGGACCACTGCACCAACACTGTCGTATCCTTGTTAAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CCA 90 bp GGTGCAGTGGTCCGAACTGACTTCTCACAATGCTGCATTATGAGAAATATGTATACCACCCTGAAGGCCTaGGTGGGGATCGGTATAATC +
Preference number: 4 (lower is better)
Translates to: GAVVRTDFSQCCIMRNMYTTLKA*VGIGII
Trigger: GATTATACCGATCCCCACCCAGGCCTTCAGGGTGGT...ATACATATTTCTCATAATGCAGCATTGTGAGAAGTCAGTTCGGACCACTGCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CCA 90 bp GAATATGGTATCTTGACGGAAGCACACTTGCTACCCCACACCTGGGGATTACTTCTTCACCTCTTCTGCTaGTATGGGAGTGGCAATATC +
Preference number: 4 (lower is better)
Translates to: EYGILTEAHLLPHTWGLLLHLFC*YGSGNI
Trigger: GATATTGCCACTCCCATACCAGCAGAAGAGGTGAAG...AAGTAATCCCCAGGTGTGGGGTAGCAAGTGTGCTTCCGTCAAGATACCATATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CCA 90 bp TTACTAAGTACAGAGCAATGTGTCGTGGAACAGCAAGCTTGGGGATGGTGCCATAGTGCAAACGGAAGCTaGAATGCGCAAGTCAGTTGT +
Preference number: 4 (lower is better)
Translates to: LLSTEQCVVEQQAWGWCHSANGS*NAQVSC
Trigger: ACAACTGACTTGCGCATTCCAGCTTCCGTTTGCACT...ATGGCACCATCCCCAAGCTTGCTGTTCCACGACACATTGCTCTGTACTTAGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CCA 90 bp GAATATGGTATCTTGACGGAAGCACACTTGCTACCCCACACCTGGGGATTACTTAGTGCAAACGGAAGCTaGAATGCGCAAGTCAGTTGT +
Preference number: 4 (lower is better)
Translates to: EYGILTEAHLLPHTWGLLSANGS*NAQVSC
Trigger: ACAACTGACTTGCGCATTCCAGCTTCCGTTTGCACT...AAGTAATCCCCAGGTGTGGGGTAGCAAGTGTGCTTCCGTCAAGATACCATATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR CCA 90 bp CATTTTAACAAGGATACGACAGTGTTGGTGCAGTGGTCCGAACTGACTTCTCACACAGTGTTGGTGCAGTaGTCCGAACTGACTTCTCAC +
Preference number: 4 (lower is better)
Translates to: HFNKDTTVLVQWSELTSHTVLVQ*SELTSH
Trigger: GTGAGAAGTCAGTTCGGACCACTGCACCAACACTGT...GTGAGAAGTCAGTTCGGACCACTGCACCAACACTGTCGTATCCTTGTTAAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR CCA 90 bp ATATGGTATCTTGACGGAAGCACACTTGCTACCCCACACCTGGGGATTACTTATACAGTGTTGGTGCAGTaGTCCGAACTGACTTCTCAC +
Preference number: 4 (lower is better)
Translates to: IWYLDGSTLATPHLGITYTVLVQ*SELTSH
Trigger: GTGAGAAGTCAGTTCGGACCACTGCACCAACACTGT...ATAAGTAATCCCCAGGTGTGGGGTAGCAAGTGTGCTTCCGTCAAGATACCATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR CCA 90 bp ATATGGTATCTTGACGGAAGCACACTTGCTACCCCACACCTGGGGATTACTTATCAGAGCAATGTGTCGTaGAACAGCAAGCTTGGGGAT +
Preference number: 4 (lower is better)
Translates to: IWYLDGSTLATPHLGITYQSNVS*NSKLGD
Trigger: ATCCCCAAGCTTGCTGTTCCACGACACATTGCTCTG...ATAAGTAATCCCCAGGTGTGGGGTAGCAAGTGTGCTTCCGTCAAGATACCATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR TCA 90 bp TGTTATACTGGAGCAGGAGAATATGGTATCTTGACGGAAGCACACTTGCTACCCCATCAAGTTCCCTTCTaGTCTGGGCTGCTTGTTCAT +
Preference number: 4 (lower is better)
Translates to: CYTGAGEYGILTEAHLLPHQVPF*SGLLVH
Trigger: ATGAACAAGCAGCCCAGATCAGAAGGGAACTTGATG...GGGTAGCAAGTGTGCTTCCGTCAAGATACCATATTCTCCTGCTCCAGTATAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR TCA 90 bp GAATATGGTATCTTGACGGAAGCACACTTGCTACCCCACACCTGGGGATTACTTTCGGACTTTGACAGCTaGATCTCATTCTCATCTCCT +
Preference number: 4 (lower is better)
Translates to: EYGILTEAHLLPHTWGLLSDFDS*ISFSSP
Trigger: AGGAGATGAGAATGAGATTCAGCTGTCAAAGTCCGA...AAGTAATCCCCAGGTGTGGGGTAGCAAGTGTGCTTCCGTCAAGATACCATATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR TCA 90 bp ATATGGTATCTTGACGGAAGCACACTTGCTACCCCACACCTGGGGATTACTTATTACCACGTCGGACTTTaGCAGCTGAATCTCATTCTC +
Preference number: 4 (lower is better)
Translates to: IWYLDGSTLATPHLGITYYHVGL*QLNLIL
Trigger: GAGAATGAGATTCAGCTGTCAAAGTCCGACGTGGTA...ATAAGTAATCCCCAGGTGTGGGGTAGCAAGTGTGCTTCCGTCAAGATACCATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR TCA 90 bp GACTTCTCACAATGCTGCATTATGAGAAATATGTATCTCGCTTTACACAGAAAACCCCCATTGTGGCCTTaGGGCTTCGGCCTGGTCTGT +
Preference number: 4 (lower is better)
Translates to: DFSQCCIMRNMYLALHRKPPLWP*GFGLVC
Trigger: ACAGACCAGGCCGAAGCCTCAAGGCCACAATGGGGG...TTTTCTGTGTAAAGCGAGATACATATTTCTCATAATGCAGCATTGTGAGAAGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000615869.4
CDS-3UTR TCA 90 bp GGTGCAGTGGTCCGAACTGACTTCTCACAATGCTGCATTATGAGAAATATGTATGTGGTGAAATCTCCTTaGGTCCCCCATTGTGGCCTT +
Preference number: 4 (lower is better)
Translates to: GAVVRTDFSQCCIMRNMYVVKSP*VPHCGL
Trigger: AAGGCCACAATGGGGGACTCAAGGAGATTTCACCAC...ATACATATTTCTCATAATGCAGCATTGTGAGAAGTCAGTTCGGACCACTGCACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000615869.4
CDS-3UTR TCA 90 bp TCATGTTCTGATCACAAGCAGAGCCAAGGTTCATTTTTAGGTCAAACTACACAAGAGGATGGGTGGTGGTaGAATCTCCTTGAGTCCCCC +
Preference number: 4 (lower is better)
Translates to: SCSDHKQSQGSFLGQTTQEDGWW*NLLESP
Trigger: GGGGGACTCAAGGAGATTTCACCACCACCCATCCTC...TTGTGTAGTTTGACCTAAAAATGAACCTTGGCTCTGCTTGTGATCAGAACATGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000615869.4
CDS-3UTR TCA 90 bp AGATTTTTATTGCCTGCAAGCTGTTATACTGGAGCAGGAGAATATGGTATCTTGAACATACAACCACCCTaGAGGCCTGGGTGGGGATCG +
Preference number: 4 (lower is better)
Translates to: RFLLPASCYTGAGEYGILNIQPP*RPGWGS
Trigger: CGATCCCCACCCAGGCCTTCAGGGTGGTTGTATGTT...CAAGATACCATATTCTCCTGCTCCAGTATAACAGCTTGCAGGCAATAAAAATCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR TCA 90 bp CCATTGGATAATCTAGTCTATATTTGGGTTTGGCAATCCTTTCATCCCAGGAATAACATACAACCACCCTaGAGGCCTGGGTGGGGATCG +
Preference number: 4 (lower is better)
Translates to: PLDNLVYIWVWQSFHPRNNIQPP*RPGWGS
Trigger: CGATCCCCACCCAGGCCTTCAGGGTGGTTGTATGTT...ATTCCTGGGATGAAAGGATTGCCAAACCCAAATATAGACTAGATTATCCAATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR TCA 90 bp TCATGTTCTGATCACAAGCAGAGCCAAGGTTCATTTTTAGGTCAAACTACACAAAACATACAACCACCCTaGAGGCCTGGGTGGGGATCG +
Preference number: 4 (lower is better)
Translates to: SCSDHKQSQGSFLGQTTQNIQPP*RPGWGS
Trigger: CGATCCCCACCCAGGCCTTCAGGGTGGTTGTATGTT...TTGTGTAGTTTGACCTAAAAATGAACCTTGGCTCTGCTTGTGATCAGAACATGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000615869.4
CDS-3UTR TCA 90 bp ATATGGTATCTTGACGGAAGCACACTTGCTACCCCACACCTGGGGATTACTTATGAATCATTCAGTCTGTaGTCCAAAGTCTGCCTCTGG +
Preference number: 4 (lower is better)
Translates to: IWYLDGSTLATPHLGITYESFSL*SKVCLW
Trigger: CCAGAGGCAGACTTTGGATCACAGACTGAATGATTC...ATAAGTAATCCCCAGGTGTGGGGTAGCAAGTGTGCTTCCGTCAAGATACCATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR TCA 90 bp TTACTAAGTACAGAGCAATGTGTCGTGGAACAGCAAGCTTGGGGATGGTGCCATGACAGCACCATTTTCTaGATGTTCCATCAGTTCTGC +
Preference number: 4 (lower is better)
Translates to: LLSTEQCVVEQQAWGWCHDSTIF*MFHQFC
Trigger: GCAGAACTGATGGAACATTCAGAAAATGGTGCTGTC...ATGGCACCATCCCCAAGCTTGCTGTTCCACGACACATTGCTCTGTACTTAGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR TCA 90 bp GAATATGGTATCTTGACGGAAGCACACTTGCTACCCCACACCTGGGGATTACTTTCAACCACACGCAAATaGCTTTCATGGAACTGCTGT +
Preference number: 4 (lower is better)
Translates to: EYGILTEAHLLPHTWGLLSTTRK*LSWNCC
Trigger: ACAGCAGTTCCATGAAAGTCATTTGCGTGTGGTTGA...AAGTAATCCCCAGGTGTGGGGTAGCAAGTGTGCTTCCGTCAAGATACCATATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR TCA 90 bp TGCCATTGGAGAGTTTGGGATAGCATGACTGGACATTTGAGGGTTTGGAGAAAATGCAGTGGTCCGAACTaGCTTCTCACAATGCTGCAT +
Preference number: 4 (lower is better)
Translates to: CHWRVWDSMTGHLRVWRKCSGPN*LLTMLH
Trigger: ATGCAGCATTGTGAGAAGTCAGTTCGGACCACTGCA...TTTTCTCCAAACCCTCAAATGTCCAGTCATGCTATCCCAAACTCTCCAATGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR GCA 90 bp GAAGGAAGAAATTTCCTTGTTTGTTATCTTAGCCCTAGGGCCCAGAAAATGAGCTGTTTGTTAAGCTTCTaGTGCCTCCGGGCCATGTCG +
Preference number: 4 (lower is better)
Translates to: EGRNFLVCYLSPRAQKMSCLLSF*CLRAMS
Trigger: CGACATGGCCCGGAGGCAGCAGAAGCTTAACAAACA...GCTCATTTTCTGGGCCCTAGGGCTAAGATAACAAACAAGGAAATTTCTTCCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR GCA 90 bp GGTGCAGTGGTCCGAACTGACTTCTCACAATGCTGCATTATGAGAAATATGTATTGTTTGTTAAGCTTCTaGTGCCTCCGGGCCATGTCG +
Preference number: 4 (lower is better)
Translates to: GAVVRTDFSQCCIMRNMYCLLSF*CLRAMS
Trigger: CGACATGGCCCGGAGGCAGCAGAAGCTTAACAAACA...ATACATATTTCTCATAATGCAGCATTGTGAGAAGTCAGTTCGGACCACTGCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000615869.4
CDS-3UTR GCA 90 bp ATATGGTATCTTGACGGAAGCACACTTGCTACCCCACACCTGGGGATTACTTATCCTTCTGATCTGGGCTaGTTGTTCATCTGCGTTATC +
Preference number: 4 (lower is better)
Translates to: IWYLDGSTLATPHLGITYPSDLG*LFICVI
Trigger: GATAACGCAGATGAACAAGCAGCCCAGATCAGAAGG...ATAAGTAATCCCCAGGTGTGGGGTAGCAAGTGTGCTTCCGTCAAGATACCATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR GCA 90 bp GAATATGGTATCTTGACGGAAGCACACTTGCTACCCCACACCTGGGGATTACTTATTTTATCTGCCAATTaGAGCCGGCCATCAAGTTCC +
Preference number: 4 (lower is better)
Translates to: EYGILTEAHLLPHTWGLLILSAN*SRPSSS
Trigger: GGAACTTGATGGCCGGCTGCAATTGGCAGATAAAAT...AAGTAATCCCCAGGTGTGGGGTAGCAAGTGTGCTTCCGTCAAGATACCATATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR GCA 90 bp TTACTAAGTACAGAGCAATGTGTCGTGGAACAGCAAGCTTGGGGATGGTGCCATAGAAAGCTGAGCATCTaGATGGAGAGTTCCTCCTTT +
Preference number: 4 (lower is better)
Translates to: LLSTEQCVVEQQAWGWCHRKLSI*MESSSF
Trigger: AAAGGAGGAACTCTCCATGCAGATGCTCAGCTTTCT...ATGGCACCATCCCCAAGCTTGCTGTTCCACGACACATTGCTCTGTACTTAGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR GCA 90 bp TTTTTATTGCCTGCAAGCTGTTATACTGGAGCAGGAGAATATGGTATCTTGACGTTCCATCAGGCCTGTTaGCGTGCACATGAGAGGCAC +
Preference number: 4 (lower is better)
Translates to: FLLPASCYTGAGEYGILTFHQAC*RAHERH
Trigger: GTGCCTCTCATGTGCACGGCAACAGGCCTGATGGAA...CGTCAAGATACCATATTCTCCTGCTCCAGTATAACAGCTTGCAGGCAATAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR GCA 90 bp GAATATGGTATCTTGACGGAAGCACACTTGCTACCCCACACCTGGGGATTACTTCTCTGTTTCCTTTTCTaGTGGGCCTTCTATTTTGGC +
Preference number: 4 (lower is better)
Translates to: EYGILTEAHLLPHTWGLLLCFLF*WAFYFG
Trigger: GCCAAAATAGAAGGCCCAGCAGAAAAGGAAACAGAG...AAGTAATCCCCAGGTGTGGGGTAGCAAGTGTGCTTCCGTCAAGATACCATATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000313070.11
ENST00000462699.5
ENST00000615869.4
CDS-3UTR GCA 90 bp GACAGTGTTGGTGCAGTGGTCCGAACTGACTTCTCACAATGCTGCATTATGAGAGCTGTAAGACTTCTATaGAGAGCTCTGCCAGATGAA +
Preference number: 4 (lower is better)
Translates to: DSVGAVVRTDFSQCCIMRAVRLL*RALPDE
Trigger: TTCATCTGGCAGAGCTCTGCATAGAAGTCTTACAGC...TCTCATAATGCAGCATTGTGAGAAGTCAGTTCGGACCACTGCACCAACACTGTC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR GCA 90 bp GAATATGGTATCTTGACGGAAGCACACTTGCTACCCCACACCTGGGGATTACTTAAACGGAAGCTGGAATaGGCAAGTCAGTTGTTTTGC +
Preference number: 4 (lower is better)
Translates to: EYGILTEAHLLPHTWGLLKRKLE*ASQLFC
Trigger: GCAAAACAACTGACTTGCGCATTCCAGCTTCCGTTT...AAGTAATCCCCAGGTGTGGGGTAGCAAGTGTGCTTCCGTCAAGATACCATATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR CCA 90 bp GGTGCAGTGGTCCGAACTGACTTCTCACAATGCTGCATTATGAGAAATATGTATGAACGAAAGGAAAACTaGCCAGGGCTTTCCGGACAC +
Preference number: 4 (lower is better)
Translates to: GAVVRTDFSQCCIMRNMYERKEN*PGLSGH
Trigger: GTGTCCGGAAAGCCCTGGCCAGTTTTCCTTTCGTTC...ATACATATTTCTCATAATGCAGCATTGTGAGAAGTCAGTTCGGACCACTGCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000615869.4
CDS-3UTR CCA 90 bp ATATGGTATCTTGACGGAAGCACACTTGCTACCCCACACCTGGGGATTACTTATCACTCTGTACCATTCTaGCCACTCGGTCACTCTTTA +
Preference number: 4 (lower is better)
Translates to: IWYLDGSTLATPHLGITYHSVPF*PLGHSL
Trigger: TAAAGAGTGACCGAGTGGCCAGAATGGTACAGAGTG...ATAAGTAATCCCCAGGTGTGGGGTAGCAAGTGTGCTTCCGTCAAGATACCATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CCA 90 bp GTTGGTGCAGTGGTCCGAACTGACTTCTCACAATGCTGCATTATGAGAAATATGAGTTCCCTTCTGATCTaGGCTGCTTGTTCATCTGCG +
Preference number: 4 (lower is better)
Translates to: VGAVVRTDFSQCCIMRNMSSLLI*AACSSA
Trigger: CGCAGATGAACAAGCAGCCCAGATCAGAAGGGAACT...CATATTTCTCATAATGCAGCATTGTGAGAAGTCAGTTCGGACCACTGCACCAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CCA 90 bp TTTTTATTGCCTGCAAGCTGTTATACTGGAGCAGGAGAATATGGTATCTTGACGACCACAGGCCGAGGATaGGTGGTGGTGAAATCTCCT +
Preference number: 4 (lower is better)
Translates to: FLLPASCYTGAGEYGILTTTGRG*VVVKSP
Trigger: AGGAGATTTCACCACCACCCATCCTCGGCCTGTGGT...CGTCAAGATACCATATTCTCCTGCTCCAGTATAACAGCTTGCAGGCAATAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CCA 90 bp CATTTTAACAAGGATACGACAGTGTTGGTGCAGTGGTCCGAACTGACTTCTCACTCTAACACAAAGACTTaGCCAGGGCTAAACCATCCC +
Preference number: 4 (lower is better)
Translates to: HFNKDTTVLVQWSELTSHSNTKT*PGLNHP
Trigger: GGGATGGTTTAGCCCTGGCCAAGTCTTTGTGTTAGA...GTGAGAAGTCAGTTCGGACCACTGCACCAACACTGTCGTATCCTTGTTAAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CCA 90 bp TGTTATACTGGAGCAGGAGAATATGGTATCTTGACGGAAGCACACTTGCTACCCTCTAACACAAAGACTTaGCCAGGGCTAAACCATCCC +
Preference number: 4 (lower is better)
Translates to: CYTGAGEYGILTEAHLLPSNTKT*PGLNHP
Trigger: GGGATGGTTTAGCCCTGGCCAAGTCTTTGTGTTAGA...GGGTAGCAAGTGTGCTTCCGTCAAGATACCATATTCTCCTGCTCCAGTATAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CCA 90 bp GACAGTGTTGGTGCAGTGGTCCGAACTGACTTCTCACAATGCTGCATTATGAGACCTCTTCTGCTGGTATaGGAGTGGCAATATCTTTCA +
Preference number: 4 (lower is better)
Translates to: DSVGAVVRTDFSQCCIMRPLLLV*EWQYLS
Trigger: TGAAAGATATTGCCACTCCCATACCAGCAGAAGAGG...TCTCATAATGCAGCATTGTGAGAAGTCAGTTCGGACCACTGCACCAACACTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CCA 90 bp CATTTTAACAAGGATACGACAGTGTTGGTGCAGTGGTCCGAACTGACTTCTCACCTTCACCTCTTCTGCTaGTATGGGAGTGGCAATATC +
Preference number: 4 (lower is better)
Translates to: HFNKDTTVLVQWSELTSHLHLFC*YGSGNI
Trigger: GATATTGCCACTCCCATACCAGCAGAAGAGGTGAAG...GTGAGAAGTCAGTTCGGACCACTGCACCAACACTGTCGTATCCTTGTTAAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CCA 90 bp TGCCATTGGAGAGTTTGGGATAGCATGACTGGACATTTGAGGGTTTGGAGAAAACTAGCAGGAGATGCCTaGTTCATGGTCTCTGTTTCC +
Preference number: 4 (lower is better)
Translates to: CHWRVWDSMTGHLRVWRKLAGDA*FMVSVS
Trigger: GGAAACAGAGACCATGAACCAGGCATCTCCTGCTAG...TTTTCTCCAAACCCTCAAATGTCCAGTCATGCTATCCCAAACTCTCCAATGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313070.11
ENST00000615869.4
CDS-3UTR CCA 90 bp ATATGGTATCTTGACGGAAGCACACTTGCTACCCCACACCTGGGGATTACTTATCTTTGCTCTAAGTGGTaGGCAAATTCCTGTTCTGGC +
Preference number: 4 (lower is better)
Translates to: IWYLDGSTLATPHLGITYLCSKW*ANSCSG
Trigger: GCCAGAACAGGAATTTGCCCACCACTTAGAGCAAAG...ATAAGTAATCCCCAGGTGTGGGGTAGCAAGTGTGCTTCCGTCAAGATACCATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR CCA 90 bp CATTTTAACAAGGATACGACAGTGTTGGTGCAGTGGTCCGAACTGACTTCTCACAGTGCAAACGGAAGCTaGAATGCGCAAGTCAGTTGT +
Preference number: 4 (lower is better)
Translates to: HFNKDTTVLVQWSELTSHSANGS*NAQVSC
Trigger: ACAACTGACTTGCGCATTCCAGCTTCCGTTTGCACT...GTGAGAAGTCAGTTCGGACCACTGCACCAACACTGTCGTATCCTTGTTAAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR CCA 90 bp GAATATGGTATCTTGACGGAAGCACACTTGCTACCCCACACCTGGGGATTACTTTGCCATTGGAGAGTTTaGGATAGCATGACTGGACAT +
Preference number: 4 (lower is better)
Translates to: EYGILTEAHLLPHTWGLLCHWRV*DSMTGH
Trigger: ATGTCCAGTCATGCTATCCCAAACTCTCCAATGGCA...AAGTAATCCCCAGGTGTGGGGTAGCAAGTGTGCTTCCGTCAAGATACCATATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CCA 90 bp GAATATGGTATCTTGACGGAAGCACACTTGCTACCCCACACCTGGGGATTACTTCTAGCAGGAGATGCCTaGTTCATGGTCTCTTCTATT +
Preference number: 4 (lower is better)
Translates to: EYGILTEAHLLPHTWGLLLAGDA*FMVSSI
Trigger: AATAGAAGAGACCATGAACCAGGCATCTCCTGCTAG...AAGTAATCCCCAGGTGTGGGGTAGCAAGTGTGCTTCCGTCAAGATACCATATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334010.11
ENST00000449022.7
3UTR CAA 72 bp GGAGCAGGAGAATATGGTATCTTGACGGAAGCACACTaGCTACCCCACACCTGGGGATTACTTATAGTTGAA +
Preference number: 4 (lower is better)
Translates to: GAGEYGILTEAH*LPHTWGLLIVE
Trigger: TTCAACTATAAGTAATCCCCAGGTGTGGGGTAGCAAGTGTGCTTCCGTCAAGATACCATATTCTCCTGCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR TCA 90 bp TGTTATACTGGAGCAGGAGAATATGGTATCTTGACGGAAGCACACTTGCTACCCTCGGACTTTGACAGCTaGATCTCATTCTCATCTCCT +
Preference number: 4 (lower is better)
Translates to: CYTGAGEYGILTEAHLLPSDFDS*ISFSSP
Trigger: AGGAGATGAGAATGAGATTCAGCTGTCAAAGTCCGA...GGGTAGCAAGTGTGCTTCCGTCAAGATACCATATTCTCCTGCTCCAGTATAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR TCA 90 bp ATATGGTATCTTGACGGAAGCACACTTGCTACCCCACACCTGGGGATTACTTATTCGGACTTTGACAGCTaGATCTCATTCTCATCTCCT +
Preference number: 4 (lower is better)
Translates to: IWYLDGSTLATPHLGITYSDFDS*ISFSSP
Trigger: AGGAGATGAGAATGAGATTCAGCTGTCAAAGTCCGA...ATAAGTAATCCCCAGGTGTGGGGTAGCAAGTGTGCTTCCGTCAAGATACCATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR TCA 90 bp ATATGGTATCTTGACGGAAGCACACTTGCTACCCCACACCTGGGGATTACTTATGCCCTATACATGGCTTaGACCCATAATATTCTGTCC +
Preference number: 4 (lower is better)
Translates to: IWYLDGSTLATPHLGITYALYMA*THNILS
Trigger: GGACAGAATATTATGGGTTCAAGCCATGTATAGGGC...ATAAGTAATCCCCAGGTGTGGGGTAGCAAGTGTGCTTCCGTCAAGATACCATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR TCA 90 bp TGTTATACTGGAGCAGGAGAATATGGTATCTTGACGGAAGCACACTTGCTACCCGCCCTATACATGGCTTaGACCCATAATATTCTGTCC +
Preference number: 4 (lower is better)
Translates to: CYTGAGEYGILTEAHLLPALYMA*THNILS
Trigger: GGACAGAATATTATGGGTTCAAGCCATGTATAGGGC...GGGTAGCAAGTGTGCTTCCGTCAAGATACCATATTCTCCTGCTCCAGTATAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR TCA 90 bp TGTTATACTGGAGCAGGAGAATATGGTATCTTGACGGAAGCACACTTGCTACCCTCTTTACCAGAAAGCTaGGCATCTGCATGGAGAGTT +
Preference number: 4 (lower is better)
Translates to: CYTGAGEYGILTEAHLLPSLPES*ASAWRV
Trigger: AACTCTCCATGCAGATGCTCAGCTTTCTGGTAAAGA...GGGTAGCAAGTGTGCTTCCGTCAAGATACCATATTCTCCTGCTCCAGTATAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313070.11
ENST00000449022.7
CDS-3UTR TCA 90 bp ATATGGTATCTTGACGGAAGCACACTTGCTACCCCACACCTGGGGATTACTTATCTAAAAAGGAAGGCATaGTCAAGCTTGCAGGGGTTT +
Preference number: 4 (lower is better)
Translates to: IWYLDGSTLATPHLGITYLKRKA*SSLQGF
Trigger: AAACCCCTGCAAGCTTGATCATGCCTTCCTTTTTAG...ATAAGTAATCCCCAGGTGTGGGGTAGCAAGTGTGCTTCCGTCAAGATACCATAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR TCA 90 bp CATTTTAACAAGGATACGACAGTGTTGGTGCAGTGGTCCGAACTGACTTCTCACCTAAAAAGGAAGGCATaGTCAAGCTTGCAGGGGTTT +
Preference number: 4 (lower is better)
Translates to: HFNKDTTVLVQWSELTSHLKRKA*SSLQGF
Trigger: AAACCCCTGCAAGCTTGATCATGCCTTCCTTTTTAG...GTGAGAAGTCAGTTCGGACCACTGCACCAACACTGTCGTATCCTTGTTAAAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR TCA 90 bp TGTTATACTGGAGCAGGAGAATATGGTATCTTGACGGAAGCACACTTGCTACCCCTAAAAAGGAAGGCATaGTCAAGCTTGCAGGGGTTT +
Preference number: 4 (lower is better)
Translates to: CYTGAGEYGILTEAHLLPLKRKA*SSLQGF
Trigger: AAACCCCTGCAAGCTTGATCATGCCTTCCTTTTTAG...GGGTAGCAAGTGTGCTTCCGTCAAGATACCATATTCTCCTGCTCCAGTATAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR TCA 90 bp TGCCATTGGAGAGTTTGGGATAGCATGACTGGACATTTGAGGGTTTGGAGAAAAGAATCATTCAGTCTGTaGTCCAAAGTCTGCCTCTGG +
Preference number: 4 (lower is better)
Translates to: CHWRVWDSMTGHLRVWRKESFSL*SKVCLW
Trigger: CCAGAGGCAGACTTTGGATCACAGACTGAATGATTC...TTTTCTCCAAACCCTCAAATGTCCAGTCATGCTATCCCAAACTCTCCAATGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR TCA 90 bp GTTGGTGCAGTGGTCCGAACTGACTTCTCACAATGCTGCATTATGAGAAATATGGAATCATTCAGTCTGTaGTCCAAAGTCTGCCTCTGG +
Preference number: 4 (lower is better)
Translates to: VGAVVRTDFSQCCIMRNMESFSL*SKVCLW
Trigger: CCAGAGGCAGACTTTGGATCACAGACTGAATGATTC...CATATTTCTCATAATGCAGCATTGTGAGAAGTCAGTTCGGACCACTGCACCAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR TCA 90 bp GACAGTGTTGGTGCAGTGGTCCGAACTGACTTCTCACAATGCTGCATTATGAGATCTCGAGACATTTTCTaGCCACTTTCTTCACCTCTT +
Preference number: 4 (lower is better)
Translates to: DSVGAVVRTDFSQCCIMRSRDIF*PLSSPL
Trigger: AAGAGGTGAAGAAAGTGGTCAGAAAATGTCTCGAGA...TCTCATAATGCAGCATTGTGAGAAGTCAGTTCGGACCACTGCACCAACACTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR TCA 90 bp GGTGCAGTGGTCCGAACTGACTTCTCACAATGCTGCATTATGAGAAATATGTATCGATGGAAGACTCCATaGGATCCACATAGCGGACAA +
Preference number: 4 (lower is better)
Translates to: GAVVRTDFSQCCIMRNMYRWKTP*DPHSGQ
Trigger: TTGTCCGCTATGTGGATCTCATGGAGTCTTCCATCG...ATACATATTTCTCATAATGCAGCATTGTGAGAAGTCAGTTCGGACCACTGCACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR TCA 90 bp GTTGGTGCAGTGGTCCGAACTGACTTCTCACAATGCTGCATTATGAGAAATATGTGCTCAAAACCTCTGTaGATTGACTGGGCGATGGAA +
Preference number: 4 (lower is better)
Translates to: VGAVVRTDFSQCCIMRNMCSKPL*IDWAME
Trigger: TTCCATCGCCCAGTCAATTCACAGAGGTTTTGAGCA...CATATTTCTCATAATGCAGCATTGTGAGAAGTCAGTTCGGACCACTGCACCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR TCA 90 bp GGTGCAGTGGTCCGAACTGACTTCTCACAATGCTGCATTATGAGAAATATGTATGCCTTCATCATACCTTaGCAGCTTAGACAACACGCC +
Preference number: 4 (lower is better)
Translates to: GAVVRTDFSQCCIMRNMYAFIIP*QLRQHA
Trigger: GGCGTGTTGTCTAAGCTGTCAAGGTATGATGAAGGC...ATACATATTTCTCATAATGCAGCATTGTGAGAAGTCAGTTCGGACCACTGCACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR TCA 90 bp ATATGGTATCTTGACGGAAGCACACTTGCTACCCCACACCTGGGGATTACTTATTTCATAGTAATGCCCTaGAGTCCTCCTCCTTCTGAA +
Preference number: 4 (lower is better)
Translates to: IWYLDGSTLATPHLGITYFIVMP*SPPPSE
Trigger: TTCAGAAGGAGGAGGACTTCAGGGCATTACTATGAA...ATAAGTAATCCCCAGGTGTGGGGTAGCAAGTGTGCTTCCGTCAAGATACCATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR TCA 90 bp GACAGTGTTGGTGCAGTGGTCCGAACTGACTTCTCACAATGCTGCATTATGAGAAAAAAGTTCATGTTCTaGTCACAAGCAGAGCCAAGG +
Preference number: 4 (lower is better)
Translates to: DSVGAVVRTDFSQCCIMRKKFMF*SQAEPR
Trigger: CCTTGGCTCTGCTTGTGATCAGAACATGAACTTTTT...TCTCATAATGCAGCATTGTGAGAAGTCAGTTCGGACCACTGCACCAACACTGTC
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR TCA 90 bp TTACTAAGTACAGAGCAATGTGTCGTGGAACAGCAAGCTTGGGGATGGTGCCATAAAAAGTTCATGTTCTaGTCACAAGCAGAGCCAAGG +
Preference number: 4 (lower is better)
Translates to: LLSTEQCVVEQQAWGWCHKKFMF*SQAEPR
Trigger: CCTTGGCTCTGCTTGTGATCAGAACATGAACTTTTT...ATGGCACCATCCCCAAGCTTGCTGTTCCACGACACATTGCTCTGTACTTAGTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR TCA 90 bp GGTGCAGTGGTCCGAACTGACTTCTCACAATGCTGCATTATGAGAAATATGTATTGCAGTGGTCCGAACTaGCTTCTCACAATGCTGCAT +
Preference number: 4 (lower is better)
Translates to: GAVVRTDFSQCCIMRNMYCSGPN*LLTMLH
Trigger: ATGCAGCATTGTGAGAAGTCAGTTCGGACCACTGCA...ATACATATTTCTCATAATGCAGCATTGTGAGAAGTCAGTTCGGACCACTGCACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR TCA 90 bp ATATGGTATCTTGACGGAAGCACACTTGCTACCCCACACCTGGGGATTACTTATGAGAATATGGTATCTTaGCGGAAGCACACTTGCTAC +
Preference number: 4 (lower is better)
Translates to: IWYLDGSTLATPHLGITYENMVS*RKHTCY
Trigger: GTAGCAAGTGTGCTTCCGTCAAGATACCATATTCTC...ATAAGTAATCCCCAGGTGTGGGGTAGCAAGTGTGCTTCCGTCAAGATACCATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR GCA 90 bp AGATTTTTATTGCCTGCAAGCTGTTATACTGGAGCAGGAGAATATGGTATCTTGTTGTTAAGCTTCTGCTaGCTCCGGGCCATGTCGGTG +
Preference number: 4 (lower is better)
Translates to: RFLLPASCYTGAGEYGILLLSFC*LRAMSV
Trigger: CACCGACATGGCCCGGAGGCAGCAGAAGCTTAACAA...CAAGATACCATATTCTCCTGCTCCAGTATAACAGCTTGCAGGCAATAAAAATCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR GCA 90 bp TCATGTTCTGATCACAAGCAGAGCCAAGGTTCATTTTTAGGTCAAACTACACAATTGTTAAGCTTCTGCTaGCTCCGGGCCATGTCGGTG +
Preference number: 4 (lower is better)
Translates to: SCSDHKQSQGSFLGQTTQLLSFC*LRAMSV
Trigger: CACCGACATGGCCCGGAGGCAGCAGAAGCTTAACAA...TTGTGTAGTTTGACCTAAAAATGAACCTTGGCTCTGCTTGTGATCAGAACATGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000615869.4
CDS-3UTR GCA 90 bp ATATGGTATCTTGACGGAAGCACACTTGCTACCCCACACCTGGGGATTACTTATATTTTATCTGCCAATTaGAGCCGGCCATCAAGTTCC +
Preference number: 4 (lower is better)
Translates to: IWYLDGSTLATPHLGITYILSAN*SRPSSS
Trigger: GGAACTTGATGGCCGGCTGCAATTGGCAGATAAAAT...ATAAGTAATCCCCAGGTGTGGGGTAGCAAGTGTGCTTCCGTCAAGATACCATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR GCA 90 bp TGCCATTGGAGAGTTTGGGATAGCATGACTGGACATTTGAGGGTTTGGAGAAAACTTTGCCATTTTATCTaGCAATTGCAGCCGGCCATC +
Preference number: 4 (lower is better)
Translates to: CHWRVWDSMTGHLRVWRKLCHFI*QLQPAI
Trigger: GATGGCCGGCTGCAATTGGCAGATAAAATGGCAAAG...TTTTCTCCAAACCCTCAAATGTCCAGTCATGCTATCCCAAACTCTCCAATGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR GCA 90 bp TGTTATACTGGAGCAGGAGAATATGGTATCTTGACGGAAGCACACTTGCTACCCAGAAAGCTGAGCATCTaGATGGAGAGTTCCTCCTTT +
Preference number: 4 (lower is better)
Translates to: CYTGAGEYGILTEAHLLPRKLSI*MESSSF
Trigger: AAAGGAGGAACTCTCCATGCAGATGCTCAGCTTTCT...GGGTAGCAAGTGTGCTTCCGTCAAGATACCATATTCTCCTGCTCCAGTATAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR GCA 90 bp TTACTAAGTACAGAGCAATGTGTCGTGGAACAGCAAGCTTGGGGATGGTGCCATATGTTCCATCAGTTCTaGAAGGTAGCAGAGATGTCT +
Preference number: 4 (lower is better)
Translates to: LLSTEQCVVEQQAWGWCHMFHQF*KVAEMS
Trigger: AGACATCTCTGCTACCTTGCAGAACTGATGGAACAT...ATGGCACCATCCCCAAGCTTGCTGTTCCACGACACATTGCTCTGTACTTAGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR GCA 90 bp CCATTGGATAATCTAGTCTATATTTGGGTTTGGCAATCCTTTCATCCCAGGAATTTCCATCAGGCCTGTTaGCGTGCACATGAGAGGCAC +
Preference number: 4 (lower is better)
Translates to: PLDNLVYIWVWQSFHPRNFHQAC*RAHERH
Trigger: GTGCCTCTCATGTGCACGGCAACAGGCCTGATGGAA...ATTCCTGGGATGAAAGGATTGCCAAACCCAAATATAGACTAGATTATCCAATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR GCA 90 bp ATATGGTATCTTGACGGAAGCACACTTGCTACCCCACACCTGGGGATTACTTATTTTCTTCACCTCTTCTaGTGGTATGGGAGTGGCAAT +
Preference number: 4 (lower is better)
Translates to: IWYLDGSTLATPHLGITYFLHLF*WYGSGN
Trigger: ATTGCCACTCCCATACCAGCAGAAGAGGTGAAGAAA...ATAAGTAATCCCCAGGTGTGGGGTAGCAAGTGTGCTTCCGTCAAGATACCATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR GCA 90 bp CATTTTAACAAGGATACGACAGTGTTGGTGCAGTGGTCCGAACTGACTTCTCACCTCTGTTTCCTTTTCTaGTGGGCCTTCTATTTTGGC +
Preference number: 4 (lower is better)
Translates to: HFNKDTTVLVQWSELTSHLCFLF*WAFYFG
Trigger: GCCAAAATAGAAGGCCCAGCAGAAAAGGAAACAGAG...GTGAGAAGTCAGTTCGGACCACTGCACCAACACTGTCGTATCCTTGTTAAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000313070.11
ENST00000462699.5
ENST00000615869.4
CDS-3UTR GCA 90 bp GAATATGGTATCTTGACGGAAGCACACTTGCTACCCCACACCTGGGGATTACTTTTCTATGCAGAGCTCTaGCAGATGAAGAATCTCTTC +
Preference number: 4 (lower is better)
Translates to: EYGILTEAHLLPHTWGLLFYAEL*QMKNLF
Trigger: GAAGAGATTCTTCATCTGGCAGAGCTCTGCATAGAA...AAGTAATCCCCAGGTGTGGGGTAGCAAGTGTGCTTCCGTCAAGATACCATATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR GCA 90 bp GTTGGTGCAGTGGTCCGAACTGACTTCTCACAATGCTGCATTATGAGAAATATGGGGCACAGAGTTTGGTaGTTTGCTTTTTGGCATCGA +
Preference number: 4 (lower is better)
Translates to: VGAVVRTDFSQCCIMRNMGHRVW*FAFWHR
Trigger: TCGATGCCAAAAAGCAAAGCACCAAACTCTGTGCCC...CATATTTCTCATAATGCAGCATTGTGAGAAGTCAGTTCGGACCACTGCACCAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR CCA 90 bp TGCCATTGGAGAGTTTGGGATAGCATGACTGGACATTTGAGGGTTTGGAGAAAACCATTGAGGAAGGCCTaGAACCGTTCTTTCAGTAAC +
Preference number: 4 (lower is better)
Translates to: CHWRVWDSMTGHLRVWRKPLRKA*NRSFSN
Trigger: GTTACTGAAAGAACGGTTCCAGGCCTTCCTCAATGG...TTTTCTCCAAACCCTCAAATGTCCAGTCATGCTATCCCAAACTCTCCAATGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CCA 90 bp CATTTTAACAAGGATACGACAGTGTTGGTGCAGTGGTCCGAACTGACTTCTCACCAAGCCATCTATTTCTaGCAAACTCCGCACACGTTT +
Preference number: 4 (lower is better)
Translates to: HFNKDTTVLVQWSELTSHQAIYF*QTPHTF
Trigger: AAACGTGTGCGGAGTTTGCCAGAAATAGATGGCTTG...GTGAGAAGTCAGTTCGGACCACTGCACCAACACTGTCGTATCCTTGTTAAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CCA 90 bp TTACTAAGTACAGAGCAATGTGTCGTGGAACAGCAAGCTTGGGGATGGTGCCATACCACCTTTCGAAACTaGAAGACTTTCCAAATTGGC +
Preference number: 4 (lower is better)
Translates to: LLSTEQCVVEQQAWGWCHTTFRN*KTFQIG
Trigger: GCCAATTTGGAAAGTCTTCCAGTTTCGAAAGGTGGT...ATGGCACCATCCCCAAGCTTGCTGTTCCACGACACATTGCTCTGTACTTAGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CCA 90 bp GAATATGGTATCTTGACGGAAGCACACTTGCTACCCCACACCTGGGGATTACTTATGCTTCATATGTGCTaGTTTATCCATTCGCACTGC +
Preference number: 4 (lower is better)
Translates to: EYGILTEAHLLPHTWGLLMLHMC*FIHSHC
Trigger: GCAGTGCGAATGGATAAACCAGCACATATGAAGCAT...AAGTAATCCCCAGGTGTGGGGTAGCAAGTGTGCTTCCGTCAAGATACCATATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CCA 90 bp CATTTTAACAAGGATACGACAGTGTTGGTGCAGTGGTCCGAACTGACTTCTCACCCTCTTCTGCTGGTATaGGAGTGGCAATATCTTTCA +
Preference number: 4 (lower is better)
Translates to: HFNKDTTVLVQWSELTSHPLLLV*EWQYLS
Trigger: TGAAAGATATTGCCACTCCCATACCAGCAGAAGAGG...GTGAGAAGTCAGTTCGGACCACTGCACCAACACTGTCGTATCCTTGTTAAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CCA 90 bp ATATGGTATCTTGACGGAAGCACACTTGCTACCCCACACCTGGGGATTACTTATCCTCTTCTGCTGGTATaGGAGTGGCAATATCTTTCA +
Preference number: 4 (lower is better)
Translates to: IWYLDGSTLATPHLGITYPLLLV*EWQYLS
Trigger: TGAAAGATATTGCCACTCCCATACCAGCAGAAGAGG...ATAAGTAATCCCCAGGTGTGGGGTAGCAAGTGTGCTTCCGTCAAGATACCATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CCA 90 bp TGCCATTGGAGAGTTTGGGATAGCATGACTGGACATTTGAGGGTTTGGAGAAAACTTCACCTCTTCTGCTaGTATGGGAGTGGCAATATC +
Preference number: 4 (lower is better)
Translates to: CHWRVWDSMTGHLRVWRKLHLFC*YGSGNI
Trigger: GATATTGCCACTCCCATACCAGCAGAAGAGGTGAAG...TTTTCTCCAAACCCTCAAATGTCCAGTCATGCTATCCCAAACTCTCCAATGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CCA 90 bp GAATATGGTATCTTGACGGAAGCACACTTGCTACCCCACACCTGGGGATTACTTTTGGAAGAGCTACATTaGGAAGACTGTTGGCGATAT +
Preference number: 4 (lower is better)
Translates to: EYGILTEAHLLPHTWGLLLEELH*EDCWRY
Trigger: ATATCGCCAACAGTCTTCCCAATGTAGCTCTTCCAA...AAGTAATCCCCAGGTGTGGGGTAGCAAGTGTGCTTCCGTCAAGATACCATATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR CCA 90 bp TTACTAAGTACAGAGCAATGTGTCGTGGAACAGCAAGCTTGGGGATGGTGCCATCAGACTTGGAACTTTTaGAAGAGCTACATTGGGAAG +
Preference number: 4 (lower is better)
Translates to: LLSTEQCVVEQQAWGWCHQTWNF*KSYIGK
Trigger: CTTCCCAATGTAGCTCTTCCAAAAGTTCCAAGTCTG...ATGGCACCATCCCCAAGCTTGCTGTTCCACGACACATTGCTCTGTACTTAGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CCA 90 bp GACAGTGTTGGTGCAGTGGTCCGAACTGACTTCTCACAATGCTGCATTATGAGACAGACTTGGAACTTTTaGAAGAGCTACATTGGGAAG +
Preference number: 4 (lower is better)
Translates to: DSVGAVVRTDFSQCCIMRQTWNF*KSYIGK
Trigger: CTTCCCAATGTAGCTCTTCCAAAAGTTCCAAGTCTG...TCTCATAATGCAGCATTGTGAGAAGTCAGTTCGGACCACTGCACCAACACTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR CCA 90 bp GAATATGGTATCTTGACGGAAGCACACTTGCTACCCCACACCTGGGGATTACTTCAGACTTGGAACTTTTaGAAGAGCTACATTGGGAAG +
Preference number: 4 (lower is better)
Translates to: EYGILTEAHLLPHTWGLLQTWNF*KSYIGK
Trigger: CTTCCCAATGTAGCTCTTCCAAAAGTTCCAAGTCTG...AAGTAATCCCCAGGTGTGGGGTAGCAAGTGTGCTTCCGTCAAGATACCATATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR CCA 90 bp GACAGTGTTGGTGCAGTGGTCCGAACTGACTTCTCACAATGCTGCATTATGAGATTGCTGAGCCATTGGTaGACTCATATAAAGAAGGCA +
Preference number: 4 (lower is better)
Translates to: DSVGAVVRTDFSQCCIMRLLSHW*THIKKA
Trigger: TGCCTTCTTTATATGAGTCCACCAATGGCTCAGCAA...TCTCATAATGCAGCATTGTGAGAAGTCAGTTCGGACCACTGCACCAACACTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR CCA 90 bp GAATATGGTATCTTGACGGAAGCACACTTGCTACCCCACACCTGGGGATTACTTTTGCTGAGCCATTGGTaGACTCATATAAAGAAGGCA +
Preference number: 4 (lower is better)
Translates to: EYGILTEAHLLPHTWGLLLLSHW*THIKKA
Trigger: TGCCTTCTTTATATGAGTCCACCAATGGCTCAGCAA...AAGTAATCCCCAGGTGTGGGGTAGCAAGTGTGCTTCCGTCAAGATACCATATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR CCA 90 bp TGCCATTGGAGAGTTTGGGATAGCATGACTGGACATTTGAGGGTTTGGAGAAAAGGCAAATTCCTGTTCTaGCCAGTGCAGATCAAAGAC +
Preference number: 4 (lower is better)
Translates to: CHWRVWDSMTGHLRVWRKGKFLF*PVQIKD
Trigger: GTCTTTGATCTGCACTGGCCAGAACAGGAATTTGCC...TTTTCTCCAAACCCTCAAATGTCCAGTCATGCTATCCCAAACTCTCCAATGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CCA 90 bp CATTTTAACAAGGATACGACAGTGTTGGTGCAGTGGTCCGAACTGACTTCTCACTGGAGCAGGAGAATATaGTATCTTGACGGAAGCACA +
Preference number: 4 (lower is better)
Translates to: HFNKDTTVLVQWSELTSHWSRRI*YLDGST
Trigger: TGTGCTTCCGTCAAGATACCATATTCTCCTGCTCCA...GTGAGAAGTCAGTTCGGACCACTGCACCAACACTGTCGTATCCTTGTTAAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR CCA 90 bp GACAGTGTTGGTGCAGTGGTCCGAACTGACTTCTCACAATGCTGCATTATGAGAATGGGAGAACGAATCTaGAGGTCCAAGTTGTTTCAT +
Preference number: 4 (lower is better)
Translates to: DSVGAVVRTDFSQCCIMRMGERI*RSKLFH
Trigger: ATGAAACAACTTGGACCTCCAGATTCGTTCTCCCAT...TCTCATAATGCAGCATTGTGAGAAGTCAGTTCGGACCACTGCACCAACACTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CCA 90 bp TGTTATACTGGAGCAGGAGAATATGGTATCTTGACGGAAGCACACTTGCTACCCTGCCATTGGAGAGTTTaGGATAGCATGACTGGACAT +
Preference number: 4 (lower is better)
Translates to: CYTGAGEYGILTEAHLLPCHWRV*DSMTGH
Trigger: ATGTCCAGTCATGCTATCCCAAACTCTCCAATGGCA...GGGTAGCAAGTGTGCTTCCGTCAAGATACCATATTCTCCTGCTCCAGTATAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR TCA 90 bp GAAGGAAGAAATTTCCTTGTTTGTTATCTTAGCCCTAGGGCCCAGAAAATGAGCCATCAAGTTCCCTTCTaGTCTGGGCTGCTTGTTCAT +
Preference number: 4 (lower is better)
Translates to: EGRNFLVCYLSPRAQKMSHQVPF*SGLLVH
Trigger: ATGAACAAGCAGCCCAGATCAGAAGGGAACTTGATG...GCTCATTTTCTGGGCCCTAGGGCTAAGATAACAAACAAGGAAATTTCTTCCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR TCA 90 bp GGTGCAGTGGTCCGAACTGACTTCTCACAATGCTGCATTATGAGAAATATGTATCATCAAGTTCCCTTCTaGTCTGGGCTGCTTGTTCAT +
Preference number: 4 (lower is better)
Translates to: GAVVRTDFSQCCIMRNMYHQVPF*SGLLVH
Trigger: ATGAACAAGCAGCCCAGATCAGAAGGGAACTTGATG...ATACATATTTCTCATAATGCAGCATTGTGAGAAGTCAGTTCGGACCACTGCACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000615869.4
CDS-3UTR TCA 90 bp TCATGTTCTGATCACAAGCAGAGCCAAGGTTCATTTTTAGGTCAAACTACACAATCGATTGGGAGCAACTaGCTTCAGGCCTTGCACTTC +
Preference number: 4 (lower is better)
Translates to: SCSDHKQSQGSFLGQTTQSIGSN*LQALHF
Trigger: GAAGTGCAAGGCCTGAAGTCAGTTGCTCCCAATCGA...TTGTGTAGTTTGACCTAAAAATGAACCTTGGCTCTGCTTGTGATCAGAACATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000615869.4
CDS-3UTR TCA 90 bp TCATGTTCTGATCACAAGCAGAGCCAAGGTTCATTTTTAGGTCAAACTACACAAGTGGTGAAATCTCCTTaGGTCCCCCATTGTGGCCTT +
Preference number: 4 (lower is better)
Translates to: SCSDHKQSQGSFLGQTTQVVKSP*VPHCGL
Trigger: AAGGCCACAATGGGGGACTCAAGGAGATTTCACCAC...TTGTGTAGTTTGACCTAAAAATGAACCTTGGCTCTGCTTGTGATCAGAACATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000615869.4
CDS-3UTR TCA 90 bp GACTTCTCACAATGCTGCATTATGAGAAATATGTATCTCGCTTTACACAGAAAAGAGGATGGGTGGTGGTaGAATCTCCTTGAGTCCCCC +
Preference number: 4 (lower is better)
Translates to: DFSQCCIMRNMYLALHRKEDGWW*NLLESP
Trigger: GGGGGACTCAAGGAGATTTCACCACCACCCATCCTC...TTTTCTGTGTAAAGCGAGATACATATTTCTCATAATGCAGCATTGTGAGAAGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000615869.4
CDS-3UTR TCA 90 bp ATATGGTATCTTGACGGAAGCACACTTGCTACCCCACACCTGGGGATTACTTATACTGGTTTATATGATTaGCCTGTGGCCCTATACATG +
Preference number: 4 (lower is better)
Translates to: IWYLDGSTLATPHLGITYTGLYD*PVALYM
Trigger: CATGTATAGGGCCACAGGTCAATCATATAAACCAGT...ATAAGTAATCCCCAGGTGTGGGGTAGCAAGTGTGCTTCCGTCAAGATACCATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR TCA 90 bp ATATGGTATCTTGACGGAAGCACACTTGCTACCCCACACCTGGGGATTACTTATAGGAACTGGTTTATATaGTTGACCTGTGGCCCTATA +
Preference number: 4 (lower is better)
Translates to: IWYLDGSTLATPHLGITYRNWFI*LTCGPI
Trigger: TATAGGGCCACAGGTCAATCATATAAACCAGTTCCT...ATAAGTAATCCCCAGGTGTGGGGTAGCAAGTGTGCTTCCGTCAAGATACCATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR TCA 90 bp CATTTTAACAAGGATACGACAGTGTTGGTGCAGTGGTCCGAACTGACTTCTCACAGGAACTGGTTTATATaGTTGACCTGTGGCCCTATA +
Preference number: 4 (lower is better)
Translates to: HFNKDTTVLVQWSELTSHRNWFI*LTCGPI
Trigger: TATAGGGCCACAGGTCAATCATATAAACCAGTTCCT...GTGAGAAGTCAGTTCGGACCACTGCACCAACACTGTCGTATCCTTGTTAAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR TCA 90 bp GTTGGTGCAGTGGTCCGAACTGACTTCTCACAATGCTGCATTATGAGAAATATGTCTTTACCAGAAAGCTaGGCATCTGCATGGAGAGTT +
Preference number: 4 (lower is better)
Translates to: VGAVVRTDFSQCCIMRNMSLPES*ASAWRV
Trigger: AACTCTCCATGCAGATGCTCAGCTTTCTGGTAAAGA...CATATTTCTCATAATGCAGCATTGTGAGAAGTCAGTTCGGACCACTGCACCAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313070.11
ENST00000449022.7
CDS-3UTR TCA 90 bp GGTGCAGTGGTCCGAACTGACTTCTCACAATGCTGCATTATGAGAAATATGTATGAATCATTCAGTCTGTaGTCCAAAGTCTGCCTCTGG +
Preference number: 4 (lower is better)
Translates to: GAVVRTDFSQCCIMRNMYESFSL*SKVCLW
Trigger: CCAGAGGCAGACTTTGGATCACAGACTGAATGATTC...ATACATATTTCTCATAATGCAGCATTGTGAGAAGTCAGTTCGGACCACTGCACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000615869.4
CDS-3UTR TCA 90 bp TCATGTTCTGATCACAAGCAGAGCCAAGGTTCATTTTTAGGTCAAACTACACAACTGTTGCCGTGCACATaGGAGGCACAGAATGCAAAG +
Preference number: 4 (lower is better)
Translates to: SCSDHKQSQGSFLGQTTQLLPCT*EAQNAK
Trigger: CTTTGCATTCTGTGCCTCTCATGTGCACGGCAACAG...TTGTGTAGTTTGACCTAAAAATGAACCTTGGCTCTGCTTGTGATCAGAACATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000615869.4
CDS-3UTR TCA 90 bp GGTGCAGTGGTCCGAACTGACTTCTCACAATGCTGCATTATGAGAAATATGTATTGCTCAAAACCTCTGTaGATTGACTGGGCGATGGAA +
Preference number: 4 (lower is better)
Translates to: GAVVRTDFSQCCIMRNMYCSKPL*IDWAME
Trigger: TTCCATCGCCCAGTCAATTCACAGAGGTTTTGAGCA...ATACATATTTCTCATAATGCAGCATTGTGAGAAGTCAGTTCGGACCACTGCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR TCA 90 bp TGTTATACTGGAGCAGGAGAATATGGTATCTTGACGGAAGCACACTTGCTACCCCAGTTCTTGTTCTTTTaGCACAGGCCTCTAGCATAT +
Preference number: 4 (lower is better)
Translates to: CYTGAGEYGILTEAHLLPQFLFF*HRPLAY
Trigger: ATATGCTAGAGGCCTGTGTCAAAAGAACAAGAACTG...GGGTAGCAAGTGTGCTTCCGTCAAGATACCATATTCTCCTGCTCCAGTATAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR TCA 90 bp TTTTTATTGCCTGCAAGCTGTTATACTGGAGCAGGAGAATATGGTATCTTGACGGCCTTCATCATACCTTaGCAGCTTAGACAACACGCC +
Preference number: 4 (lower is better)
Translates to: FLLPASCYTGAGEYGILTAFIIP*QLRQHA
Trigger: GGCGTGTTGTCTAAGCTGTCAAGGTATGATGAAGGC...CGTCAAGATACCATATTCTCCTGCTCCAGTATAACAGCTTGCAGGCAATAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR TCA 90 bp GTTGGTGCAGTGGTCCGAACTGACTTCTCACAATGCTGCATTATGAGAAATATGTCAACCACACGCAAATaGCTTTCATGGAACTGCTGT +
Preference number: 4 (lower is better)
Translates to: VGAVVRTDFSQCCIMRNMSTTRK*LSWNCC
Trigger: ACAGCAGTTCCATGAAAGTCATTTGCGTGTGGTTGA...CATATTTCTCATAATGCAGCATTGTGAGAAGTCAGTTCGGACCACTGCACCAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR TCA 90 bp ATATGGTATCTTGACGGAAGCACACTTGCTACCCCACACCTGGGGATTACTTATAAAAAGTTCATGTTCTaGTCACAAGCAGAGCCAAGG +
Preference number: 4 (lower is better)
Translates to: IWYLDGSTLATPHLGITYKKFMF*SQAEPR
Trigger: CCTTGGCTCTGCTTGTGATCAGAACATGAACTTTTT...ATAAGTAATCCCCAGGTGTGGGGTAGCAAGTGTGCTTCCGTCAAGATACCATAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR TCA 90 bp TGCCATTGGAGAGTTTGGGATAGCATGACTGGACATTTGAGGGTTTGGAGAAAAGAGAATATGGTATCTTaGCGGAAGCACACTTGCTAC +
Preference number: 4 (lower is better)
Translates to: CHWRVWDSMTGHLRVWRKENMVS*RKHTCY
Trigger: GTAGCAAGTGTGCTTCCGTCAAGATACCATATTCTC...TTTTCTCCAAACCCTCAAATGTCCAGTCATGCTATCCCAAACTCTCCAATGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR TCA 90 bp GAATATGGTATCTTGACGGAAGCACACTTGCTACCCCACACCTGGGGATTACTTGATAGTTGGGATGTTTaGAACACTGCAAACCTCTTT +
Preference number: 4 (lower is better)
Translates to: EYGILTEAHLLPHTWGLLDSWDV*NTANLF
Trigger: AAAGAGGTTTGCAGTGTTTCAAACATCCCAACTATC...AAGTAATCCCCAGGTGTGGGGTAGCAAGTGTGCTTCCGTCAAGATACCATATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR TCA 90 bp CATTTTAACAAGGATACGACAGTGTTGGTGCAGTGGTCCGAACTGACTTCTCACCTAGGGCCCAGAAAATaGGCCAAAACAATGCTAAAT +
Preference number: 4 (lower is better)
Translates to: HFNKDTTVLVQWSELTSHLGPRK*AKTMLN
Trigger: ATTTAGCATTGTTTTGGCTCATTTTCTGGGCCCTAG...GTGAGAAGTCAGTTCGGACCACTGCACCAACACTGTCGTATCCTTGTTAAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR TCA 90 bp TGTTATACTGGAGCAGGAGAATATGGTATCTTGACGGAAGCACACTTGCTACCCCTAGGGCCCAGAAAATaGGCCAAAACAATGCTAAAT +
Preference number: 4 (lower is better)
Translates to: CYTGAGEYGILTEAHLLPLGPRK*AKTMLN
Trigger: ATTTAGCATTGTTTTGGCTCATTTTCTGGGCCCTAG...GGGTAGCAAGTGTGCTTCCGTCAAGATACCATATTCTCCTGCTCCAGTATAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR GCA 90 bp ATTTTTATTGCCTGCAAGCTGTTATACTGGAGCAGGAGAATATGGTATCTTGACTGTTTGTTAAGCTTCTaGTGCCTCCGGGCCATGTCG +
Preference number: 4 (lower is better)
Translates to: IFIACKLLYWSRRIWYLDCLLSF*CLRAMS
Trigger: CGACATGGCCCGGAGGCAGCAGAAGCTTAACAAACA...GTCAAGATACCATATTCTCCTGCTCCAGTATAACAGCTTGCAGGCAATAAAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR GCA 90 bp GAATATGGTATCTTGACGGAAGCACACTTGCTACCCCACACCTGGGGATTACTTAACTGCGTTGCAAAATaGTTCGTCAGCTACAATTTG +
Preference number: 4 (lower is better)
Translates to: EYGILTEAHLLPHTWGLLNCVAK*FVSYNL
Trigger: CAAATTGTAGCTGACGAAGCATTTTGCAACGCAGTT...AAGTAATCCCCAGGTGTGGGGTAGCAAGTGTGCTTCCGTCAAGATACCATATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR GCA 90 bp GACAGTGTTGGTGCAGTGGTCCGAACTGACTTCTCACAATGCTGCATTATGAGAAACTGCGTTGCAAAATaGTTCGTCAGCTACAATTTG +
Preference number: 4 (lower is better)
Translates to: DSVGAVVRTDFSQCCIMRNCVAK*FVSYNL
Trigger: CAAATTGTAGCTGACGAAGCATTTTGCAACGCAGTT...TCTCATAATGCAGCATTGTGAGAAGTCAGTTCGGACCACTGCACCAACACTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR GCA 90 bp TGCCATTGGAGAGTTTGGGATAGCATGACTGGACATTTGAGGGTTTGGAGAAAAAACTCCGAACTGCGTTaGAAAATGCTTCGTCAGCTA +
Preference number: 4 (lower is better)
Translates to: CHWRVWDSMTGHLRVWRKNSELR*KMLRQL
Trigger: TAGCTGACGAAGCATTTTGCAACGCAGTTCGGAGTT...TTTTCTCCAAACCCTCAAATGTCCAGTCATGCTATCCCAAACTCTCCAATGGCA
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR GCA 90 bp TTACTAAGTACAGAGCAATGTGTCGTGGAACAGCAAGCTTGGGGATGGTGCCATATAATAACTCCGAACTaGGTTGCAAAATGCTTCGTC +
Preference number: 4 (lower is better)
Translates to: LLSTEQCVVEQQAWGWCHIITPN*VAKCFV
Trigger: GACGAAGCATTTTGCAACGCAGTTCGGAGTTATTAT...ATGGCACCATCCCCAAGCTTGCTGTTCCACGACACATTGCTCTGTACTTAGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR GCA 90 bp TTACTAAGTACAGAGCAATGTGTCGTGGAACAGCAAGCTTGGGGATGGTGCCATTCAACACTGTCTCTTTaGTCAAGCCATCTATTTCTG +
Preference number: 4 (lower is better)
Translates to: LLSTEQCVVEQQAWGWCHSTLSL*SSHLFL
Trigger: CAGAAATAGATGGCTTGAGCAAAGAGACAGTGTTGA...ATGGCACCATCCCCAAGCTTGCTGTTCCACGACACATTGCTCTGTACTTAGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR GCA 90 bp GACAGTGTTGGTGCAGTGGTCCGAACTGACTTCTCACAATGCTGCATTATGAGATCAACACTGTCTCTTTaGTCAAGCCATCTATTTCTG +
Preference number: 4 (lower is better)
Translates to: DSVGAVVRTDFSQCCIMRSTLSL*SSHLFL
Trigger: CAGAAATAGATGGCTTGAGCAAAGAGACAGTGTTGA...TCTCATAATGCAGCATTGTGAGAAGTCAGTTCGGACCACTGCACCAACACTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR GCA 90 bp TGTTATACTGGAGCAGGAGAATATGGTATCTTGACGGAAGCACACTTGCTACCCACTGACTTCAGGCCTTaGACTTCCATTATGACAATC +
Preference number: 4 (lower is better)
Translates to: CYTGAGEYGILTEAHLLPTDFRP*TSIMTI
Trigger: GATTGTCATAATGGAAGTGCAAGGCCTGAAGTCAGT...GGGTAGCAAGTGTGCTTCCGTCAAGATACCATATTCTCCTGCTCCAGTATAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR GCA 90 bp CATTTTAACAAGGATACGACAGTGTTGGTGCAGTGGTCCGAACTGACTTCTCACATGTTCCATCAGTTCTaGAAGGTAGCAGAGATGTCT +
Preference number: 4 (lower is better)
Translates to: HFNKDTTVLVQWSELTSHMFHQF*KVAEMS
Trigger: AGACATCTCTGCTACCTTGCAGAACTGATGGAACAT...GTGAGAAGTCAGTTCGGACCACTGCACCAACACTGTCGTATCCTTGTTAAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR GCA 90 bp CATTTTAACAAGGATACGACAGTGTTGGTGCAGTGGTCCGAACTGACTTCTCACTTCTATGCAGAGCTCTaGCAGATGAAGAATCTCTTC +
Preference number: 4 (lower is better)
Translates to: HFNKDTTVLVQWSELTSHFYAEL*QMKNLF
Trigger: GAAGAGATTCTTCATCTGGCAGAGCTCTGCATAGAA...GTGAGAAGTCAGTTCGGACCACTGCACCAACACTGTCGTATCCTTGTTAAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR GCA 90 bp ATATGGTATCTTGACGGAAGCACACTTGCTACCCCACACCTGGGGATTACTTATTTCTATGCAGAGCTCTaGCAGATGAAGAATCTCTTC +
Preference number: 4 (lower is better)
Translates to: IWYLDGSTLATPHLGITYFYAEL*QMKNLF
Trigger: GAAGAGATTCTTCATCTGGCAGAGCTCTGCATAGAA...ATAAGTAATCCCCAGGTGTGGGGTAGCAAGTGTGCTTCCGTCAAGATACCATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR GCA 90 bp TGTTATACTGGAGCAGGAGAATATGGTATCTTGACGGAAGCACACTTGCTACCCTTCTATGCAGAGCTCTaGCAGATGAAGAATCTCTTC +
Preference number: 4 (lower is better)
Translates to: CYTGAGEYGILTEAHLLPFYAEL*QMKNLF
Trigger: GAAGAGATTCTTCATCTGGCAGAGCTCTGCATAGAA...GGGTAGCAAGTGTGCTTCCGTCAAGATACCATATTCTCCTGCTCCAGTATAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR GCA 90 bp GGTGCAGTGGTCCGAACTGACTTCTCACAATGCTGCATTATGAGAAATATGTATCCAGGCAAATGCCTCTaGATGATGCTCTTCATTCTG +
Preference number: 4 (lower is better)
Translates to: GAVVRTDFSQCCIMRNMYPGKCL*MMLFIL
Trigger: CAGAATGAAGAGCATCATGCAGAGGCATTTGCCTGG...ATACATATTTCTCATAATGCAGCATTGTGAGAAGTCAGTTCGGACCACTGCACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000615869.4
CDS-3UTR GCA 90 bp GAAGGAAGAAATTTCCTTGTTTGTTATCTTAGCCCTAGGGCCCAGAAAATGAGCCCAGGCAAATGCCTCTaGATGATGCTCTTCATTCTG +
Preference number: 4 (lower is better)
Translates to: EGRNFLVCYLSPRAQKMSPGKCL*MMLFIL
Trigger: CAGAATGAAGAGCATCATGCAGAGGCATTTGCCTGG...GCTCATTTTCTGGGCCCTAGGGCTAAGATAACAAACAAGGAAATTTCTTCCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000615869.4
CDS-3UTR GCA 90 bp TCATGTTCTGATCACAAGCAGAGCCAAGGTTCATTTTTAGGTCAAACTACACAAAGGCCACCAGGCAAATaGCTCTGCATGATGCTCTTC +
Preference number: 4 (lower is better)
Translates to: SCSDHKQSQGSFLGQTTQRPPGK*LCMMLF
Trigger: GAAGAGCATCATGCAGAGGCATTTGCCTGGTGGCCT...TTGTGTAGTTTGACCTAAAAATGAACCTTGGCTCTGCTTGTGATCAGAACATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000615869.4
CDS-3UTR GCA 90 bp TGTTATACTGGAGCAGGAGAATATGGTATCTTGACGGAAGCACACTTGCTACCCATATTCTTGACAGGCTaGCATGTCTCCTGCTCAAAA +
Preference number: 4 (lower is better)
Translates to: CYTGAGEYGILTEAHLLPIFLTG*HVSCSK
Trigger: TTTTGAGCAGGAGACATGGCAGCCTGTCAAGAATAT...GGGTAGCAAGTGTGCTTCCGTCAAGATACCATATTCTCCTGCTCCAGTATAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR GCA 90 bp TGCCATTGGAGAGTTTGGGATAGCATGACTGGACATTTGAGGGTTTGGAGAAAAAAACGGAAGCTGGAATaGGCAAGTCAGTTGTTTTGC +
Preference number: 4 (lower is better)
Translates to: CHWRVWDSMTGHLRVWRKKRKLE*ASQLFC
Trigger: GCAAAACAACTGACTTGCGCATTCCAGCTTCCGTTT...TTTTCTCCAAACCCTCAAATGTCCAGTCATGCTATCCCAAACTCTCCAATGGCA
44% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR GCA 90 bp GAAGGAAGAAATTTCCTTGTTTGTTATCTTAGCCCTAGGGCCCAGAAAATGAGCGGGCACAGAGTTTGGTaGTTTGCTTTTTGGCATCGA +
Preference number: 4 (lower is better)
Translates to: EGRNFLVCYLSPRAQKMSGHRVW*FAFWHR
Trigger: TCGATGCCAAAAAGCAAAGCACCAAACTCTGTGCCC...GCTCATTTTCTGGGCCCTAGGGCTAAGATAACAAACAAGGAAATTTCTTCCTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR GCA 90 bp GGTGCAGTGGTCCGAACTGACTTCTCACAATGCTGCATTATGAGAAATATGTATCCATTGTTGACAGGCTaGCATGTCTCCTGCTCAAAA +
Preference number: 4 (lower is better)
Translates to: GAVVRTDFSQCCIMRNMYPLLTG*HVSCSK
Trigger: TTTTGAGCAGGAGACATGGCAGCCTGTCAACAATGG...ATACATATTTCTCATAATGCAGCATTGTGAGAAGTCAGTTCGGACCACTGCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412584.6
CDS-3UTR CCA 90 bp ACTGACTTCTCACAATGCTGCATTATGAGAAATATGTATCTCGCTTTACACAGACAGGTGGGGAACCTGTaGCGCCTACAACAAGCAACA +
Preference number: 4 (lower is better)
Translates to: TDFSQCCIMRNMYLALHRQVGNL*RLQQAT
Trigger: TGTTGCTTGTTGTAGGCGCCACAGGTTCCCCACCTG...TCTGTGTAAAGCGAGATACATATTTCTCATAATGCAGCATTGTGAGAAGTCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000615869.4
CDS-3UTR CCA 90 bp GGTGCAGTGGTCCGAACTGACTTCTCACAATGCTGCATTATGAGAAATATGTATCACTCTGTACCATTCTaGCCACTCGGTCACTCTTTA +
Preference number: 4 (lower is better)
Translates to: GAVVRTDFSQCCIMRNMYHSVPF*PLGHSL
Trigger: TAAAGAGTGACCGAGTGGCCAGAATGGTACAGAGTG...ATACATATTTCTCATAATGCAGCATTGTGAGAAGTCAGTTCGGACCACTGCACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CCA 90 bp TGCCATTGGAGAGTTTGGGATAGCATGACTGGACATTTGAGGGTTTGGAGAAAACAAGCCATCTATTTCTaGCAAACTCCGCACACGTTT +
Preference number: 4 (lower is better)
Translates to: CHWRVWDSMTGHLRVWRKQAIYF*QTPHTF
Trigger: AAACGTGTGCGGAGTTTGCCAGAAATAGATGGCTTG...TTTTCTCCAAACCCTCAAATGTCCAGTCATGCTATCCCAAACTCTCCAATGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CCA 90 bp ACTGACTTCTCACAATGCTGCATTATGAGAAATATGTATCTCGCTTTACACAGAACCACAGGCCGAGGATaGGTGGTGGTGAAATCTCCT +
Preference number: 4 (lower is better)
Translates to: TDFSQCCIMRNMYLALHRTTGRG*VVVKSP
Trigger: AGGAGATTTCACCACCACCCATCCTCGGCCTGTGGT...TCTGTGTAAAGCGAGATACATATTTCTCATAATGCAGCATTGTGAGAAGTCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CCA 90 bp GAATATGGTATCTTGACGGAAGCACACTTGCTACCCCACACCTGGGGATTACTTCCTGTTCATCATCACTaGCAAAGATTACAGTATCTC +
Preference number: 4 (lower is better)
Translates to: EYGILTEAHLLPHTWGLLPVHHH*QRLQYL
Trigger: GAGATACTGTAATCTTTGCCAGTGATGATGAACAGG...AAGTAATCCCCAGGTGTGGGGTAGCAAGTGTGCTTCCGTCAAGATACCATATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CCA 90 bp ATATGGTATCTTGACGGAAGCACACTTGCTACCCCACACCTGGGGATTACTTATCTGTGGCCCTATACATaGCTTGAACCCATAATATTC +
Preference number: 4 (lower is better)
Translates to: IWYLDGSTLATPHLGITYLWPYT*LEPIIF
Trigger: GAATATTATGGGTTCAAGCCATGTATAGGGCCACAG...ATAAGTAATCCCCAGGTGTGGGGTAGCAAGTGTGCTTCCGTCAAGATACCATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CCA 90 bp GAAGGAAGAAATTTCCTTGTTTGTTATCTTAGCCCTAGGGCCCAGAAAATGAGCTCTAACACAAAGACTTaGCCAGGGCTAAACCATCCC +
Preference number: 4 (lower is better)
Translates to: EGRNFLVCYLSPRAQKMSSNTKT*PGLNHP
Trigger: GGGATGGTTTAGCCCTGGCCAAGTCTTTGTGTTAGA...GCTCATTTTCTGGGCCCTAGGGCTAAGATAACAAACAAGGAAATTTCTTCCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CCA 90 bp GACAGTGTTGGTGCAGTGGTCCGAACTGACTTCTCACAATGCTGCATTATGAGATGTTTCCTTTTCTGCTaGGCCTTCTATTTTGGCATA +
Preference number: 4 (lower is better)
Translates to: DSVGAVVRTDFSQCCIMRCFLFC*AFYFGI
Trigger: TATGCCAAAATAGAAGGCCCAGCAGAAAAGGAAACA...TCTCATAATGCAGCATTGTGAGAAGTCAGTTCGGACCACTGCACCAACACTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313070.11
ENST00000462699.5
ENST00000615869.4
CDS-3UTR CCA 90 bp CATTTTAACAAGGATACGACAGTGTTGGTGCAGTGGTCCGAACTGACTTCTCACTTGGAAGAGCTACATTaGGAAGACTGTTGGCGATAT +
Preference number: 4 (lower is better)
Translates to: HFNKDTTVLVQWSELTSHLEELH*EDCWRY
Trigger: ATATCGCCAACAGTCTTCCCAATGTAGCTCTTCCAA...GTGAGAAGTCAGTTCGGACCACTGCACCAACACTGTCGTATCCTTGTTAAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR CCA 90 bp CATTTTAACAAGGATACGACAGTGTTGGTGCAGTGGTCCGAACTGACTTCTCACTTGCTGAGCCATTGGTaGACTCATATAAAGAAGGCA +
Preference number: 4 (lower is better)
Translates to: HFNKDTTVLVQWSELTSHLLSHW*THIKKA
Trigger: TGCCTTCTTTATATGAGTCCACCAATGGCTCAGCAA...GTGAGAAGTCAGTTCGGACCACTGCACCAACACTGTCGTATCCTTGTTAAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR CCA 90 bp GACAGTGTTGGTGCAGTGGTCCGAACTGACTTCTCACAATGCTGCATTATGAGAATGTTGCTGAGCCATTaGTGGACTCATATAAAGAAG +
Preference number: 4 (lower is better)
Translates to: DSVGAVVRTDFSQCCIMRMLLSH*WTHIKK
Trigger: CTTCTTTATATGAGTCCACCAATGGCTCAGCAACAT...TCTCATAATGCAGCATTGTGAGAAGTCAGTTCGGACCACTGCACCAACACTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR CCA 90 bp TTACTAAGTACAGAGCAATGTGTCGTGGAACAGCAAGCTTGGGGATGGTGCCATATGTTGCTGAGCCATTaGTGGACTCATATAAAGAAG +
Preference number: 4 (lower is better)
Translates to: LLSTEQCVVEQQAWGWCHMLLSH*WTHIKK
Trigger: CTTCTTTATATGAGTCCACCAATGGCTCAGCAACAT...ATGGCACCATCCCCAAGCTTGCTGTTCCACGACACATTGCTCTGTACTTAGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CCA 90 bp GGTGCAGTGGTCCGAACTGACTTCTCACAATGCTGCATTATGAGAAATATGTATGGCAAATTCCTGTTCTaGCCAGTGCAGATCAAAGAC +
Preference number: 4 (lower is better)
Translates to: GAVVRTDFSQCCIMRNMYGKFLF*PVQIKD
Trigger: GTCTTTGATCTGCACTGGCCAGAACAGGAATTTGCC...ATACATATTTCTCATAATGCAGCATTGTGAGAAGTCAGTTCGGACCACTGCACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR CCA 90 bp GAAGGAAGAAATTTCCTTGTTTGTTATCTTAGCCCTAGGGCCCAGAAAATGAGCGGCAAATTCCTGTTCTaGCCAGTGCAGATCAAAGAC +
Preference number: 4 (lower is better)
Translates to: EGRNFLVCYLSPRAQKMSGKFLF*PVQIKD
Trigger: GTCTTTGATCTGCACTGGCCAGAACAGGAATTTGCC...GCTCATTTTCTGGGCCCTAGGGCTAAGATAACAAACAAGGAAATTTCTTCCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CCA 90 bp GGTGCAGTGGTCCGAACTGACTTCTCACAATGCTGCATTATGAGAAATATGTATCTTTGCTCTAAGTGGTaGGCAAATTCCTGTTCTGGC +
Preference number: 4 (lower is better)
Translates to: GAVVRTDFSQCCIMRNMYLCSKW*ANSCSG
Trigger: GCCAGAACAGGAATTTGCCCACCACTTAGAGCAAAG...ATACATATTTCTCATAATGCAGCATTGTGAGAAGTCAGTTCGGACCACTGCACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR CCA 90 bp GGTGCAGTGGTCCGAACTGACTTCTCACAATGCTGCATTATGAGAAATATGTATAGTGCAAACGGAAGCTaGAATGCGCAAGTCAGTTGT +
Preference number: 4 (lower is better)
Translates to: GAVVRTDFSQCCIMRNMYSANGS*NAQVSC
Trigger: ACAACTGACTTGCGCATTCCAGCTTCCGTTTGCACT...ATACATATTTCTCATAATGCAGCATTGTGAGAAGTCAGTTCGGACCACTGCACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR CCA 90 bp GACAGTGTTGGTGCAGTGGTCCGAACTGACTTCTCACAATGCTGCATTATGAGATGCCAGATCCATTCCTaGTTTTGGAACATCAACATA +
Preference number: 4 (lower is better)
Translates to: DSVGAVVRTDFSQCCIMRCQIHS*FWNINI
Trigger: TATGTTGATGTTCCAAAACCAGGAATGGATCTGGCA...TCTCATAATGCAGCATTGTGAGAAGTCAGTTCGGACCACTGCACCAACACTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR CCA 90 bp TTTTTATTGCCTGCAAGCTGTTATACTGGAGCAGGAGAATATGGTATCTTGACGACAGTGTTGGTGCAGTaGTCCGAACTGACTTCTCAC +
Preference number: 4 (lower is better)
Translates to: FLLPASCYTGAGEYGILTTVLVQ*SELTSH
Trigger: GTGAGAAGTCAGTTCGGACCACTGCACCAACACTGT...CGTCAAGATACCATATTCTCCTGCTCCAGTATAACAGCTTGCAGGCAATAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR CCA 90 bp TGTTATACTGGAGCAGGAGAATATGGTATCTTGACGGAAGCACACTTGCTACCCGTCTATATTTGGGTTTaGCAATCCTTTCATCCCAGG +
Preference number: 4 (lower is better)
Translates to: CYTGAGEYGILTEAHLLPVYIWV*QSFHPR
Trigger: CCTGGGATGAAAGGATTGCCAAACCCAAATATAGAC...GGGTAGCAAGTGTGCTTCCGTCAAGATACCATATTCTCCTGCTCCAGTATAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR CCA 90 bp TGTTATACTGGAGCAGGAGAATATGGTATCTTGACGGAAGCACACTTGCTACCCTTGCTACCCCACACCTaGGGATTACTTATAGTTGAA +
Preference number: 4 (lower is better)
Translates to: CYTGAGEYGILTEAHLLPLLPHT*GLLIVE
Trigger: TTCAACTATAAGTAATCCCCAGGTGTGGGGTAGCAA...GGGTAGCAAGTGTGCTTCCGTCAAGATACCATATTCTCCTGCTCCAGTATAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR CCA 90 bp GTTGGTGCAGTGGTCCGAACTGACTTCTCACAATGCTGCATTATGAGAAATATGCCACTTATTACACCATaGGAGAACGAATCTGGAGGT +
Preference number: 4 (lower is better)
Translates to: VGAVVRTDFSQCCIMRNMPLITP*ENESGG
Trigger: ACCTCCAGATTCGTTCTCCCATGGTGTAATAAGTGG...CATATTTCTCATAATGCAGCATTGTGAGAAGTCAGTTCGGACCACTGCACCAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CCA 90 bp CCATTGGATAATCTAGTCTATATTTGGGTTTGGCAATCCTTTCATCCCAGGAATCAGCAAGCTTGGGGATaGTGCCATTGGAGAGTTTGG +
Preference number: 4 (lower is better)
Translates to: PLDNLVYIWVWQSFHPRNQQAWG*CHWRVW
Trigger: CCAAACTCTCCAATGGCACCATCCCCAAGCTTGCTG...ATTCCTGGGATGAAAGGATTGCCAAACCCAAATATAGACTAGATTATCCAATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CCA 90 bp TCATGTTCTGATCACAAGCAGAGCCAAGGTTCATTTTTAGGTCAAACTACACAACAGCAAGCTTGGGGATaGTGCCATTGGAGAGTTTGG +
Preference number: 4 (lower is better)
Translates to: SCSDHKQSQGSFLGQTTQQQAWG*CHWRVW
Trigger: CCAAACTCTCCAATGGCACCATCCCCAAGCTTGCTG...TTGTGTAGTTTGACCTAAAAATGAACCTTGGCTCTGCTTGTGATCAGAACATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CCA 90 bp TTTTTATTGCCTGCAAGCTGTTATACTGGAGCAGGAGAATATGGTATCTTGACGCAGAGCAATGTGTCGTaGAACAGCAAGCTTGGGGAT +
Preference number: 4 (lower is better)
Translates to: FLLPASCYTGAGEYGILTQSNVS*NSKLGD
Trigger: ATCCCCAAGCTTGCTGTTCCACGACACATTGCTCTG...CGTCAAGATACCATATTCTCCTGCTCCAGTATAACAGCTTGCAGGCAATAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR TCA 90 bp ACTGACTTCTCACAATGCTGCATTATGAGAAATATGTATCTCGCTTTACACAGATCGATTGGGAGCAACTaGCTTCAGGCCTTGCACTTC +
Preference number: 4 (lower is better)
Translates to: TDFSQCCIMRNMYLALHRSIGSN*LQALHF
Trigger: GAAGTGCAAGGCCTGAAGTCAGTTGCTCCCAATCGA...TCTGTGTAAAGCGAGATACATATTTCTCATAATGCAGCATTGTGAGAAGTCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000615869.4
CDS-3UTR TCA 90 bp TCATGTTCTGATCACAAGCAGAGCCAAGGTTCATTTTTAGGTCAAACTACACAATCGGCCTGGTCTGTCTaGAGTTTTTCTCCTTCCACT +
Preference number: 4 (lower is better)
Translates to: SCSDHKQSQGSFLGQTTQSAWSV*SFSPST
Trigger: AGTGGAAGGAGAAAAACTTCAGACAGACCAGGCCGA...TTGTGTAGTTTGACCTAAAAATGAACCTTGGCTCTGCTTGTGATCAGAACATGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000615869.4
CDS-3UTR TCA 90 bp ACTGACTTCTCACAATGCTGCATTATGAGAAATATGTATCTCGCTTTACACAGAGTGGTGAAATCTCCTTaGGTCCCCCATTGTGGCCTT +
Preference number: 4 (lower is better)
Translates to: TDFSQCCIMRNMYLALHRVVKSP*VPHCGL
Trigger: AAGGCCACAATGGGGGACTCAAGGAGATTTCACCAC...TCTGTGTAAAGCGAGATACATATTTCTCATAATGCAGCATTGTGAGAAGTCAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000615869.4
CDS-3UTR TCA 90 bp TGCCATTGGAGAGTTTGGGATAGCATGACTGGACATTTGAGGGTTTGGAGAAAAACTGGTTTATATGATTaGCCTGTGGCCCTATACATG +
Preference number: 4 (lower is better)
Translates to: CHWRVWDSMTGHLRVWRKTGLYD*PVALYM
Trigger: CATGTATAGGGCCACAGGTCAATCATATAAACCAGT...TTTTCTCCAAACCCTCAAATGTCCAGTCATGCTATCCCAAACTCTCCAATGGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR TCA 90 bp GGTGCAGTGGTCCGAACTGACTTCTCACAATGCTGCATTATGAGAAATATGTATCTAAAAAGGAAGGCATaGTCAAGCTTGCAGGGGTTT +
Preference number: 4 (lower is better)
Translates to: GAVVRTDFSQCCIMRNMYLKRKA*SSLQGF
Trigger: AAACCCCTGCAAGCTTGATCATGCCTTCCTTTTTAG...ATACATATTTCTCATAATGCAGCATTGTGAGAAGTCAGTTCGGACCACTGCACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000615869.4
CDS-3UTR TCA 90 bp GGTGCAGTGGTCCGAACTGACTTCTCACAATGCTGCATTATGAGAAATATGTATGACAGCACCATTTTCTaGATGTTCCATCAGTTCTGC +
Preference number: 4 (lower is better)
Translates to: GAVVRTDFSQCCIMRNMYDSTIF*MFHQFC
Trigger: GCAGAACTGATGGAACATTCAGAAAATGGTGCTGTC...ATACATATTTCTCATAATGCAGCATTGTGAGAAGTCAGTTCGGACCACTGCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000615869.4
CDS-3UTR TCA 90 bp TTACTAAGTACAGAGCAATGTGTCGTGGAACAGCAAGCTTGGGGATGGTGCCATCTGAAATGGCTTATCTaGTTTTCTAAAAGGGAAGAG +
Preference number: 4 (lower is better)
Translates to: LLSTEQCVVEQQAWGWCHLKWLI*FSKREE
Trigger: CTCTTCCCTTTTAGAAAATCAGATAAGCCATTTCAG...ATGGCACCATCCCCAAGCTTGCTGTTCCACGACACATTGCTCTGTACTTAGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR TCA 90 bp TCATGTTCTGATCACAAGCAGAGCCAAGGTTCATTTTTAGGTCAAACTACACAACGATGGAAGACTCCATaGGATCCACATAGCGGACAA +
Preference number: 4 (lower is better)
Translates to: SCSDHKQSQGSFLGQTTQRWKTP*DPHSGQ
Trigger: TTGTCCGCTATGTGGATCTCATGGAGTCTTCCATCG...TTGTGTAGTTTGACCTAAAAATGAACCTTGGCTCTGCTTGTGATCAGAACATGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR TCA 90 bp TTTTTATTGCCTGCAAGCTGTTATACTGGAGCAGGAGAATATGGTATCTTGACGTGCTCAAAACCTCTGTaGATTGACTGGGCGATGGAA +
Preference number: 4 (lower is better)
Translates to: FLLPASCYTGAGEYGILTCSKPL*IDWAME
Trigger: TTCCATCGCCCAGTCAATTCACAGAGGTTTTGAGCA...CGTCAAGATACCATATTCTCCTGCTCCAGTATAACAGCTTGCAGGCAATAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR TCA 90 bp GTTGGTGCAGTGGTCCGAACTGACTTCTCACAATGCTGCATTATGAGAAATATGCAGTTCTTGTTCTTTTaGCACAGGCCTCTAGCATAT +
Preference number: 4 (lower is better)
Translates to: VGAVVRTDFSQCCIMRNMQFLFF*HRPLAY
Trigger: ATATGCTAGAGGCCTGTGTCAAAAGAACAAGAACTG...CATATTTCTCATAATGCAGCATTGTGAGAAGTCAGTTCGGACCACTGCACCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR TCA 90 bp GAATATGGTATCTTGACGGAAGCACACTTGCTACCCCACACCTGGGGATTACTTCAGATCATCTATTTTTaGATGGTACTGTTGCTCTTG +
Preference number: 4 (lower is better)
Translates to: EYGILTEAHLLPHTWGLLQIIYF*MVLLLL
Trigger: CAAGAGCAACAGTACCATTCAAAAATAGATGATCTG...AAGTAATCCCCAGGTGTGGGGTAGCAAGTGTGCTTCCGTCAAGATACCATATTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR TCA 90 bp TGCCATTGGAGAGTTTGGGATAGCATGACTGGACATTTGAGGGTTTGGAGAAAACAGCTGCTTTCACAGTaGATGACAGAATGGATGAAA +
Preference number: 4 (lower is better)
Translates to: CHWRVWDSMTGHLRVWRKQLLSQ*MTEWMK
Trigger: TTTCATCCATTCTGTCATTCACTGTGAAAGCAGCTG...TTTTCTCCAAACCCTCAAATGTCCAGTCATGCTATCCCAAACTCTCCAATGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR TCA 90 bp GTTGGTGCAGTGGTCCGAACTGACTTCTCACAATGCTGCATTATGAGAAATATGAAAAAGTTCATGTTCTaGTCACAAGCAGAGCCAAGG +
Preference number: 4 (lower is better)
Translates to: VGAVVRTDFSQCCIMRNMKKFMF*SQAEPR
Trigger: CCTTGGCTCTGCTTGTGATCAGAACATGAACTTTTT...CATATTTCTCATAATGCAGCATTGTGAGAAGTCAGTTCGGACCACTGCACCAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR TCA 90 bp TTACTAAGTACAGAGCAATGTGTCGTGGAACAGCAAGCTTGGGGATGGTGCCATCACAATGCTGCATTATaGGAAATATGTATCTCGCTT +
Preference number: 4 (lower is better)
Translates to: LLSTEQCVVEQQAWGWCHHNAAL*EICISL
Trigger: AAGCGAGATACATATTTCTCATAATGCAGCATTGTG...ATGGCACCATCCCCAAGCTTGCTGTTCCACGACACATTGCTCTGTACTTAGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR TCA 90 bp CCATTGGATAATCTAGTCTATATTTGGGTTTGGCAATCCTTTCATCCCAGGAATTGCAGTGGTCCGAACTaGCTTCTCACAATGCTGCAT +
Preference number: 4 (lower is better)
Translates to: PLDNLVYIWVWQSFHPRNCSGPN*LLTMLH
Trigger: ATGCAGCATTGTGAGAAGTCAGTTCGGACCACTGCA...ATTCCTGGGATGAAAGGATTGCCAAACCCAAATATAGACTAGATTATCCAATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR TCA 90 bp CATTTTAACAAGGATACGACAGTGTTGGTGCAGTGGTCCGAACTGACTTCTCACGATAGTTGGGATGTTTaGAACACTGCAAACCTCTTT +
Preference number: 4 (lower is better)
Translates to: HFNKDTTVLVQWSELTSHDSWDV*NTANLF
Trigger: AAAGAGGTTTGCAGTGTTTCAAACATCCCAACTATC...GTGAGAAGTCAGTTCGGACCACTGCACCAACACTGTCGTATCCTTGTTAAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR GCA 90 bp GACTTCTCACAATGCTGCATTATGAGAAATATGTATCTCGCTTTACACAGAAAATTGTTAAGCTTCTGCTaGCTCCGGGCCATGTCGGTG +
Preference number: 4 (lower is better)
Translates to: DFSQCCIMRNMYLALHRKLLSFC*LRAMSV
Trigger: CACCGACATGGCCCGGAGGCAGCAGAAGCTTAACAA...TTTTCTGTGTAAAGCGAGATACATATTTCTCATAATGCAGCATTGTGAGAAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000615869.4
CDS-3UTR GCA 90 bp ATATGGTATCTTGACGGAAGCACACTTGCTACCCCACACCTGGGGATTACTTATAACTGCGTTGCAAAATaGTTCGTCAGCTACAATTTG +
Preference number: 4 (lower is better)
Translates to: IWYLDGSTLATPHLGITYNCVAK*FVSYNL
Trigger: CAAATTGTAGCTGACGAAGCATTTTGCAACGCAGTT...ATAAGTAATCCCCAGGTGTGGGGTAGCAAGTGTGCTTCCGTCAAGATACCATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR GCA 90 bp GGTGCAGTGGTCCGAACTGACTTCTCACAATGCTGCATTATGAGAAATATGTATAACTCCGAACTGCGTTaGAAAATGCTTCGTCAGCTA +
Preference number: 4 (lower is better)
Translates to: GAVVRTDFSQCCIMRNMYNSELR*KMLRQL
Trigger: TAGCTGACGAAGCATTTTGCAACGCAGTTCGGAGTT...ATACATATTTCTCATAATGCAGCATTGTGAGAAGTCAGTTCGGACCACTGCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000615869.4
CDS-3UTR GCA 90 bp AGATTTTTATTGCCTGCAAGCTGTTATACTGGAGCAGGAGAATATGGTATCTTGGGCTGCTTGTTCATCTaGGTTATCCAGCTGACATGC +
Preference number: 4 (lower is better)
Translates to: RFLLPASCYTGAGEYGILGCLFI*VIQLTC
Trigger: GCATGTCAGCTGGATAACGCAGATGAACAAGCAGCC...CAAGATACCATATTCTCCTGCTCCAGTATAACAGCTTGCAGGCAATAAAAATCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR GCA 90 bp GAAGGAAGAAATTTCCTTGTTTGTTATCTTAGCCCTAGGGCCCAGAAAATGAGCTTTCTTCACCTCTTCTaGTGGTATGGGAGTGGCAAT +
Preference number: 4 (lower is better)
Translates to: EGRNFLVCYLSPRAQKMSFLHLF*WYGSGN
Trigger: ATTGCCACTCCCATACCAGCAGAAGAGGTGAAGAAA...GCTCATTTTCTGGGCCCTAGGGCTAAGATAACAAACAAGGAAATTTCTTCCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR GCA 90 bp GGTGCAGTGGTCCGAACTGACTTCTCACAATGCTGCATTATGAGAAATATGTATCTCTGTTTCCTTTTCTaGTGGGCCTTCTATTTTGGC +
Preference number: 4 (lower is better)
Translates to: GAVVRTDFSQCCIMRNMYLCFLF*WAFYFG
Trigger: GCCAAAATAGAAGGCCCAGCAGAAAAGGAAACAGAG...ATACATATTTCTCATAATGCAGCATTGTGAGAAGTCAGTTCGGACCACTGCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313070.11
ENST00000462699.5
ENST00000615869.4
CDS-3UTR GCA 90 bp GGTGCAGTGGTCCGAACTGACTTCTCACAATGCTGCATTATGAGAAATATGTATGCTGTAAGACTTCTATaGAGAGCTCTGCCAGATGAA +
Preference number: 4 (lower is better)
Translates to: GAVVRTDFSQCCIMRNMYAVRLL*RALPDE
Trigger: TTCATCTGGCAGAGCTCTGCATAGAAGTCTTACAGC...ATACATATTTCTCATAATGCAGCATTGTGAGAAGTCAGTTCGGACCACTGCACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR GCA 90 bp ACTGACTTCTCACAATGCTGCATTATGAGAAATATGTATCTCGCTTTACACAGAAGGCCACCAGGCAAATaGCTCTGCATGATGCTCTTC +
Preference number: 4 (lower is better)
Translates to: TDFSQCCIMRNMYLALHRRPPGK*LCMMLF
Trigger: GAAGAGCATCATGCAGAGGCATTTGCCTGGTGGCCT...TCTGTGTAAAGCGAGATACATATTTCTCATAATGCAGCATTGTGAGAAGTCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000615869.4
CDS-3UTR GCA 90 bp TGCCATTGGAGAGTTTGGGATAGCATGACTGGACATTTGAGGGTTTGGAGAAAAATATTCTTGACAGGCTaGCATGTCTCCTGCTCAAAA +
Preference number: 4 (lower is better)
Translates to: CHWRVWDSMTGHLRVWRKIFLTG*HVSCSK
Trigger: TTTTGAGCAGGAGACATGGCAGCCTGTCAAGAATAT...TTTTCTCCAAACCCTCAAATGTCCAGTCATGCTATCCCAAACTCTCCAATGGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR GCA 90 bp ATATGGTATCTTGACGGAAGCACACTTGCTACCCCACACCTGGGGATTACTTATCAGAGTTTGGTGCTTTaGTTTTTGGCATCGACTAAT +
Preference number: 4 (lower is better)
Translates to: IWYLDGSTLATPHLGITYQSLVL*FLASTN
Trigger: ATTAGTCGATGCCAAAAAGCAAAGCACCAAACTCTG...ATAAGTAATCCCCAGGTGTGGGGTAGCAAGTGTGCTTCCGTCAAGATACCATAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR GCA 90 bp TTTTTATTGCCTGCAAGCTGTTATACTGGAGCAGGAGAATATGGTATCTTGACGGGGCACAGAGTTTGGTaGTTTGCTTTTTGGCATCGA +
Preference number: 4 (lower is better)
Translates to: FLLPASCYTGAGEYGILTGHRVW*FAFWHR
Trigger: TCGATGCCAAAAAGCAAAGCACCAAACTCTGTGCCC...CGTCAAGATACCATATTCTCCTGCTCCAGTATAACAGCTTGCAGGCAATAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR GCA 90 bp ATATGGTATCTTGACGGAAGCACACTTGCTACCCCACACCTGGGGATTACTTATCATAATATAGGTGTCTaGCAGATCCATTCCTGGTTT +
Preference number: 4 (lower is better)
Translates to: IWYLDGSTLATPHLGITYHNIGV*QIHSWF
Trigger: AAACCAGGAATGGATCTGGCAGACACCTATATTATG...ATAAGTAATCCCCAGGTGTGGGGTAGCAAGTGTGCTTCCGTCAAGATACCATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR GCA 90 bp TGTTATACTGGAGCAGGAGAATATGGTATCTTGACGGAAGCACACTTGCTACCCCATAATATAGGTGTCTaGCAGATCCATTCCTGGTTT +
Preference number: 4 (lower is better)
Translates to: CYTGAGEYGILTEAHLLPHNIGV*QIHSWF
Trigger: AAACCAGGAATGGATCTGGCAGACACCTATATTATG...GGGTAGCAAGTGTGCTTCCGTCAAGATACCATATTCTCCTGCTCCAGTATAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR GCA 90 bp CCATTGGATAATCTAGTCTATATTTGGGTTTGGCAATCCTTTCATCCCAGGAATCAAGCTTGGGGATGGTaGCATTGGAGAGTTTGGGAT +
Preference number: 4 (lower is better)
Translates to: PLDNLVYIWVWQSFHPRNQAWGW*HWRVWD
Trigger: ATCCCAAACTCTCCAATGGCACCATCCCCAAGCTTG...ATTCCTGGGATGAAAGGATTGCCAAACCCAAATATAGACTAGATTATCCAATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR GCA 90 bp ATTTTTATTGCCTGCAAGCTGTTATACTGGAGCAGGAGAATATGGTATCTTGACCAAGCTTGGGGATGGTaGCATTGGAGAGTTTGGGAT +
Preference number: 4 (lower is better)
Translates to: IFIACKLLYWSRRIWYLDQAWGW*HWRVWD
Trigger: ATCCCAAACTCTCCAATGGCACCATCCCCAAGCTTG...GTCAAGATACCATATTCTCCTGCTCCAGTATAACAGCTTGCAGGCAATAAAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR GCA 90 bp TTGGATAATCTAGTCTATATTTGGGTTTGGCAATCCTTTCATCCCAGGAATATAAGGCCACCAGGCAAATaGCTCTCTTCCCTCTGCATG +
Preference number: 4 (lower is better)
Translates to: LDNLVYIWVWQSFHPRNIRPPGK*LSSLCM
Trigger: CATGCAGAGGGAAGAGAGGCATTTGCCTGGTGGCCT...TATATTCCTGGGATGAAAGGATTGCCAAACCCAAATATAGACTAGATTATCCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449022.7
ENST00000462699.5
CDS-3UTR CCA 90 bp ACTGACTTCTCACAATGCTGCATTATGAGAAATATGTATCTCGCTTTACACAGAGAACGAAAGGAAAACTaGCCAGGGCTTTCCGGACAC +
Preference number: 4 (lower is better)
Translates to: TDFSQCCIMRNMYLALHRERKEN*PGLSGH
Trigger: GTGTCCGGAAAGCCCTGGCCAGTTTTCCTTTCGTTC...TCTGTGTAAAGCGAGATACATATTTCTCATAATGCAGCATTGTGAGAAGTCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000615869.4
CDS-3UTR CCA 90 bp GGTGCAGTGGTCCGAACTGACTTCTCACAATGCTGCATTATGAGAAATATGTATCAAGCCATCTATTTCTaGCAAACTCCGCACACGTTT +
Preference number: 4 (lower is better)
Translates to: GAVVRTDFSQCCIMRNMYQAIYF*QTPHTF
Trigger: AAACGTGTGCGGAGTTTGCCAGAAATAGATGGCTTG...ATACATATTTCTCATAATGCAGCATTGTGAGAAGTCAGTTCGGACCACTGCACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CCA 90 bp GACAGTGTTGGTGCAGTGGTCCGAACTGACTTCTCACAATGCTGCATTATGAGAAAATGGCATCATATTTaGCTATCCATGAGCTCAACA +
Preference number: 4 (lower is better)
Translates to: DSVGAVVRTDFSQCCIMRKWHHI*LSMSST
Trigger: TGTTGAGCTCATGGATAGCCAAATATGATGCCATTT...TCTCATAATGCAGCATTGTGAGAAGTCAGTTCGGACCACTGCACCAACACTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CCA 90 bp TTACTAAGTACAGAGCAATGTGTCGTGGAACAGCAAGCTTGGGGATGGTGCCATAAATGGCATCATATTTaGCTATCCATGAGCTCAACA +
Preference number: 4 (lower is better)
Translates to: LLSTEQCVVEQQAWGWCHKWHHI*LSMSST
Trigger: TGTTGAGCTCATGGATAGCCAAATATGATGCCATTT...ATGGCACCATCCCCAAGCTTGCTGTTCCACGACACATTGCTCTGTACTTAGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CCA 90 bp TGTTATACTGGAGCAGGAGAATATGGTATCTTGACGGAAGCACACTTGCTACCCCTTCACCTCTGTAAATaGCATCATATTTGGCTATCC +
Preference number: 4 (lower is better)
Translates to: CYTGAGEYGILTEAHLLPLHLCK*HHIWLS
Trigger: GGATAGCCAAATATGATGCCATTTACAGAGGTGAAG...GGGTAGCAAGTGTGCTTCCGTCAAGATACCATATTCTCCTGCTCCAGTATAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CCA 90 bp ATATGGTATCTTGACGGAAGCACACTTGCTACCCCACACCTGGGGATTACTTATCTTCACCTCTGTAAATaGCATCATATTTGGCTATCC +
Preference number: 4 (lower is better)
Translates to: IWYLDGSTLATPHLGITYLHLCK*HHIWLS
Trigger: GGATAGCCAAATATGATGCCATTTACAGAGGTGAAG...ATAAGTAATCCCCAGGTGTGGGGTAGCAAGTGTGCTTCCGTCAAGATACCATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CCA 90 bp ATTTTTATTGCCTGCAAGCTGTTATACTGGAGCAGGAGAATATGGTATCTTGACAGTTCCCTTCTGATCTaGGCTGCTTGTTCATCTGCG +
Preference number: 4 (lower is better)
Translates to: IFIACKLLYWSRRIWYLDSSLLI*AACSSA
Trigger: CGCAGATGAACAAGCAGCCCAGATCAGAAGGGAACT...GTCAAGATACCATATTCTCCTGCTCCAGTATAACAGCTTGCAGGCAATAAAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CCA 90 bp TCATGTTCTGATCACAAGCAGAGCCAAGGTTCATTTTTAGGTCAAACTACACAAAGTTCCCTTCTGATCTaGGCTGCTTGTTCATCTGCG +
Preference number: 4 (lower is better)
Translates to: SCSDHKQSQGSFLGQTTQSSLLI*AACSSA
Trigger: CGCAGATGAACAAGCAGCCCAGATCAGAAGGGAACT...TTGTGTAGTTTGACCTAAAAATGAACCTTGGCTCTGCTTGTGATCAGAACATGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CCA 90 bp GTTGGTGCAGTGGTCCGAACTGACTTCTCACAATGCTGCATTATGAGAAATATGACCACCTTTCGAAACTaGAAGACTTTCCAAATTGGC +
Preference number: 4 (lower is better)
Translates to: VGAVVRTDFSQCCIMRNMTTFRN*KTFQIG
Trigger: GCCAATTTGGAAAGTCTTCCAGTTTCGAAAGGTGGT...CATATTTCTCATAATGCAGCATTGTGAGAAGTCAGTTCGGACCACTGCACCAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CCA 90 bp GTTGGTGCAGTGGTCCGAACTGACTTCTCACAATGCTGCATTATGAGAAATATGAGTAAACAATTCGATTaGGAGCAACTGACTTCAGGC +
Preference number: 4 (lower is better)
Translates to: VGAVVRTDFSQCCIMRNMSKQFD*EQLTSG
Trigger: GCCTGAAGTCAGTTGCTCCCAATCGAATTGTTTACT...CATATTTCTCATAATGCAGCATTGTGAGAAGTCAGTTCGGACCACTGCACCAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CCA 90 bp CATTTTAACAAGGATACGACAGTGTTGGTGCAGTGGTCCGAACTGACTTCTCACTATATGATTGACCTGTaGCCCTATACATGGCTTGAA +
Preference number: 4 (lower is better)
Translates to: HFNKDTTVLVQWSELTSHYMIDL*PYTWLE
Trigger: TTCAAGCCATGTATAGGGCCACAGGTCAATCATATA...GTGAGAAGTCAGTTCGGACCACTGCACCAACACTGTCGTATCCTTGTTAAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CCA 90 bp GACAGTGTTGGTGCAGTGGTCCGAACTGACTTCTCACAATGCTGCATTATGAGACTGCTGGTATGGGAGTaGCAATATCTTTCATTAAAA +
Preference number: 4 (lower is better)
Translates to: DSVGAVVRTDFSQCCIMRLLVWE*QYLSLK
Trigger: TTTTAATGAAAGATATTGCCACTCCCATACCAGCAG...TCTCATAATGCAGCATTGTGAGAAGTCAGTTCGGACCACTGCACCAACACTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CCA 90 bp TTACTAAGTACAGAGCAATGTGTCGTGGAACAGCAAGCTTGGGGATGGTGCCATCTGCTGGTATGGGAGTaGCAATATCTTTCATTAAAA +
Preference number: 4 (lower is better)
Translates to: LLSTEQCVVEQQAWGWCHLLVWE*QYLSLK
Trigger: TTTTAATGAAAGATATTGCCACTCCCATACCAGCAG...ATGGCACCATCCCCAAGCTTGCTGTTCCACGACACATTGCTCTGTACTTAGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CCA 90 bp GGTGCAGTGGTCCGAACTGACTTCTCACAATGCTGCATTATGAGAAATATGTATCCTCTTCTGCTGGTATaGGAGTGGCAATATCTTTCA +
Preference number: 4 (lower is better)
Translates to: GAVVRTDFSQCCIMRNMYPLLLV*EWQYLS
Trigger: TGAAAGATATTGCCACTCCCATACCAGCAGAAGAGG...ATACATATTTCTCATAATGCAGCATTGTGAGAAGTCAGTTCGGACCACTGCACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CCA 90 bp CCATTGGATAATCTAGTCTATATTTGGGTTTGGCAATCCTTTCATCCCAGGAATCTAGCAGGAGATGCCTaGTTCATGGTCTCTGTTTCC +
Preference number: 4 (lower is better)
Translates to: PLDNLVYIWVWQSFHPRNLAGDA*FMVSVS
Trigger: GGAAACAGAGACCATGAACCAGGCATCTCCTGCTAG...ATTCCTGGGATGAAAGGATTGCCAAACCCAAATATAGACTAGATTATCCAATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313070.11
ENST00000462699.5
ENST00000615869.4
CDS-3UTR CCA 90 bp TGCCATTGGAGAGTTTGGGATAGCATGACTGGACATTTGAGGGTTTGGAGAAAATTGGAAGAGCTACATTaGGAAGACTGTTGGCGATAT +
Preference number: 4 (lower is better)
Translates to: CHWRVWDSMTGHLRVWRKLEELH*EDCWRY
Trigger: ATATCGCCAACAGTCTTCCCAATGTAGCTCTTCCAA...TTTTCTCCAAACCCTCAAATGTCCAGTCATGCTATCCCAAACTCTCCAATGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CCA 90 bp TGCCATTGGAGAGTTTGGGATAGCATGACTGGACATTTGAGGGTTTGGAGAAAACAGACTTGGAACTTTTaGAAGAGCTACATTGGGAAG +
Preference number: 4 (lower is better)
Translates to: CHWRVWDSMTGHLRVWRKQTWNF*KSYIGK
Trigger: CTTCCCAATGTAGCTCTTCCAAAAGTTCCAAGTCTG...TTTTCTCCAAACCCTCAAATGTCCAGTCATGCTATCCCAAACTCTCCAATGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CCA 90 bp TTACTAAGTACAGAGCAATGTGTCGTGGAACAGCAAGCTTGGGGATGGTGCCATAATGTTAGGAATCTGTaGAAGATTAAGAGGCAGACT +
Preference number: 4 (lower is better)
Translates to: LLSTEQCVVEQQAWGWCHNVRNL*KIKRQT
Trigger: AGTCTGCCTCTTAATCTTCCACAGATTCCTAACATT...ATGGCACCATCCCCAAGCTTGCTGTTCCACGACACATTGCTCTGTACTTAGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CCA 90 bp CATTTTAACAAGGATACGACAGTGTTGGTGCAGTGGTCCGAACTGACTTCTCACATGTTGCTGAGCCATTaGTGGACTCATATAAAGAAG +
Preference number: 4 (lower is better)
Translates to: HFNKDTTVLVQWSELTSHMLLSH*WTHIKK
Trigger: CTTCTTTATATGAGTCCACCAATGGCTCAGCAACAT...GTGAGAAGTCAGTTCGGACCACTGCACCAACACTGTCGTATCCTTGTTAAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR CCA 90 bp TTTTTATTGCCTGCAAGCTGTTATACTGGAGCAGGAGAATATGGTATCTTGACGGGCAAATTCCTGTTCTaGCCAGTGCAGATCAAAGAC +
Preference number: 4 (lower is better)
Translates to: FLLPASCYTGAGEYGILTGKFLF*PVQIKD
Trigger: GTCTTTGATCTGCACTGGCCAGAACAGGAATTTGCC...CGTCAAGATACCATATTCTCCTGCTCCAGTATAACAGCTTGCAGGCAATAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR CCA 90 bp GTTGGTGCAGTGGTCCGAACTGACTTCTCACAATGCTGCATTATGAGAAATATGAGTCTTTGCTCTAAGTaGTGGGCAAATTCCTGTTCT +
Preference number: 4 (lower is better)
Translates to: VGAVVRTDFSQCCIMRNMSLCSK*WANSCS
Trigger: AGAACAGGAATTTGCCCACCACTTAGAGCAAAGACT...CATATTTCTCATAATGCAGCATTGTGAGAAGTCAGTTCGGACCACTGCACCAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR CCA 90 bp GAAGGAAGAAATTTCCTTGTTTGTTATCTTAGCCCTAGGGCCCAGAAAATGAGCTGGAGCAGGAGAATATaGTATCTTGACGGAAGCACA +
Preference number: 4 (lower is better)
Translates to: EGRNFLVCYLSPRAQKMSWSRRI*YLDGST
Trigger: TGTGCTTCCGTCAAGATACCATATTCTCCTGCTCCA...GCTCATTTTCTGGGCCCTAGGGCTAAGATAACAAACAAGGAAATTTCTTCCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CCA 90 bp ATATGGTATCTTGACGGAAGCACACTTGCTACCCCACACCTGGGGATTACTTATTGCAAGCTGTTATACTaGAGCAGGAGAATATGGTAT +
Preference number: 4 (lower is better)
Translates to: IWYLDGSTLATPHLGITYCKLLY*SRRIWY
Trigger: ATACCATATTCTCCTGCTCCAGTATAACAGCTTGCA...ATAAGTAATCCCCAGGTGTGGGGTAGCAAGTGTGCTTCCGTCAAGATACCATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR CCA 90 bp TGCCATTGGAGAGTTTGGGATAGCATGACTGGACATTTGAGGGTTTGGAGAAAAATGGGAGAACGAATCTaGAGGTCCAAGTTGTTTCAT +
Preference number: 4 (lower is better)
Translates to: CHWRVWDSMTGHLRVWRKMGERI*RSKLFH
Trigger: ATGAAACAACTTGGACCTCCAGATTCGTTCTCCCAT...TTTTCTCCAAACCCTCAAATGTCCAGTCATGCTATCCCAAACTCTCCAATGGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CCA 90 bp ACTGACTTCTCACAATGCTGCATTATGAGAAATATGTATCTCGCTTTACACAGACAGCAAGCTTGGGGATaGTGCCATTGGAGAGTTTGG +
Preference number: 4 (lower is better)
Translates to: TDFSQCCIMRNMYLALHRQQAWG*CHWRVW
Trigger: CCAAACTCTCCAATGGCACCATCCCCAAGCTTGCTG...TCTGTGTAAAGCGAGATACATATTTCTCATAATGCAGCATTGTGAGAAGTCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CCA 90 bp TCATGTTCTGATCACAAGCAGAGCCAAGGTTCATTTTTAGGTCAAACTACACAACAGAGCAATGTGTCGTaGAACAGCAAGCTTGGGGAT +
Preference number: 4 (lower is better)
Translates to: SCSDHKQSQGSFLGQTTQQSNVS*NSKLGD
Trigger: ATCCCCAAGCTTGCTGTTCCACGACACATTGCTCTG...TTGTGTAGTTTGACCTAAAAATGAACCTTGGCTCTGCTTGTGATCAGAACATGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR TCA 90 bp AGATTTTTATTGCCTGCAAGCTGTTATACTGGAGCAGGAGAATATGGTATCTTGCATCAAGTTCCCTTCTaGTCTGGGCTGCTTGTTCAT +
Preference number: 4 (lower is better)
Translates to: RFLLPASCYTGAGEYGILHQVPF*SGLLVH
Trigger: ATGAACAAGCAGCCCAGATCAGAAGGGAACTTGATG...CAAGATACCATATTCTCCTGCTCCAGTATAACAGCTTGCAGGCAATAAAAATCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR TCA 90 bp TTTTTATTGCCTGCAAGCTGTTATACTGGAGCAGGAGAATATGGTATCTTGACGTCGGACTTTGACAGCTaGATCTCATTCTCATCTCCT +
Preference number: 4 (lower is better)
Translates to: FLLPASCYTGAGEYGILTSDFDS*ISFSSP
Trigger: AGGAGATGAGAATGAGATTCAGCTGTCAAAGTCCGA...CGTCAAGATACCATATTCTCCTGCTCCAGTATAACAGCTTGCAGGCAATAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR TCA 90 bp TCATGTTCTGATCACAAGCAGAGCCAAGGTTCATTTTTAGGTCAAACTACACAATACCACGTCGGACTTTaGCAGCTGAATCTCATTCTC +
Preference number: 4 (lower is better)
Translates to: SCSDHKQSQGSFLGQTTQYHVGL*QLNLIL
Trigger: GAGAATGAGATTCAGCTGTCAAAGTCCGACGTGGTA...TTGTGTAGTTTGACCTAAAAATGAACCTTGGCTCTGCTTGTGATCAGAACATGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000615869.4
CDS-3UTR TCA 90 bp TTGGATAATCTAGTCTATATTTGGGTTTGGCAATCCTTTCATCCCAGGAATATAGTGGTGAAATCTCCTTaGGTCCCCCATTGTGGCCTT +
Preference number: 4 (lower is better)
Translates to: LDNLVYIWVWQSFHPRNIVVKSP*VPHCGL
Trigger: AAGGCCACAATGGGGGACTCAAGGAGATTTCACCAC...TATATTCCTGGGATGAAAGGATTGCCAAACCCAAATATAGACTAGATTATCCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR TCA 90 bp GGTGCAGTGGTCCGAACTGACTTCTCACAATGCTGCATTATGAGAAATATGTATACTGGTTTATATGATTaGCCTGTGGCCCTATACATG +
Preference number: 4 (lower is better)
Translates to: GAVVRTDFSQCCIMRNMYTGLYD*PVALYM
Trigger: CATGTATAGGGCCACAGGTCAATCATATAAACCAGT...ATACATATTTCTCATAATGCAGCATTGTGAGAAGTCAGTTCGGACCACTGCACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000615869.4
CDS-3UTR TCA 90 bp GGTGCAGTGGTCCGAACTGACTTCTCACAATGCTGCATTATGAGAAATATGTATAGGAACTGGTTTATATaGTTGACCTGTGGCCCTATA +
Preference number: 4 (lower is better)
Translates to: GAVVRTDFSQCCIMRNMYRNWFI*LTCGPI
Trigger: TATAGGGCCACAGGTCAATCATATAAACCAGTTCCT...ATACATATTTCTCATAATGCAGCATTGTGAGAAGTCAGTTCGGACCACTGCACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000615869.4
CDS-3UTR TCA 90 bp ATATGGTATCTTGACGGAAGCACACTTGCTACCCCACACCTGGGGATTACTTATTCCATACCATGTTTCTaGAAACGATCTGCATCTTTA +
Preference number: 4 (lower is better)
Translates to: IWYLDGSTLATPHLGITYSIPCF*KRSASL
Trigger: TAAAGATGCAGATCGTTTTCAGAAACATGGTATGGA...ATAAGTAATCCCCAGGTGTGGGGTAGCAAGTGTGCTTCCGTCAAGATACCATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313070.11
ENST00000449022.7
CDS-3UTR TCA 90 bp TGCCATTGGAGAGTTTGGGATAGCATGACTGGACATTTGAGGGTTTGGAGAAAATTCTTTTTCTTCCACTaGAACAGTCCCAATTCCATC +
Preference number: 4 (lower is better)
Translates to: CHWRVWDSMTGHLRVWRKFFFFH*NSPNSI
Trigger: GATGGAATTGGGACTGTTTCAGTGGAAGAAAAAGAA...TTTTCTCCAAACCCTCAAATGTCCAGTCATGCTATCCCAAACTCTCCAATGGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR TCA 90 bp GGTGCAGTGGTCCGAACTGACTTCTCACAATGCTGCATTATGAGAAATATGTATTCTCGAGACATTTTCTaGCCACTTTCTTCACCTCTT +
Preference number: 4 (lower is better)
Translates to: GAVVRTDFSQCCIMRNMYSRDIF*PLSSPL
Trigger: AAGAGGTGAAGAAAGTGGTCAGAAAATGTCTCGAGA...ATACATATTTCTCATAATGCAGCATTGTGAGAAGTCAGTTCGGACCACTGCACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000615869.4
CDS-3UTR TCA 90 bp TCATGTTCTGATCACAAGCAGAGCCAAGGTTCATTTTTAGGTCAAACTACACAATGCTCAAAACCTCTGTaGATTGACTGGGCGATGGAA +
Preference number: 4 (lower is better)
Translates to: SCSDHKQSQGSFLGQTTQCSKPL*IDWAME
Trigger: TTCCATCGCCCAGTCAATTCACAGAGGTTTTGAGCA...TTGTGTAGTTTGACCTAAAAATGAACCTTGGCTCTGCTTGTGATCAGAACATGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR TCA 90 bp GGTGCAGTGGTCCGAACTGACTTCTCACAATGCTGCATTATGAGAAATATGTATCAGTTCTTGTTCTTTTaGCACAGGCCTCTAGCATAT +
Preference number: 4 (lower is better)
Translates to: GAVVRTDFSQCCIMRNMYQFLFF*HRPLAY
Trigger: ATATGCTAGAGGCCTGTGTCAAAAGAACAAGAACTG...ATACATATTTCTCATAATGCAGCATTGTGAGAAGTCAGTTCGGACCACTGCACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR TCA 90 bp GTTGGTGCAGTGGTCCGAACTGACTTCTCACAATGCTGCATTATGAGAAATATGTTGCCTTTTGTAGCTTaGGTTCAAATGCAGTTCTTG +
Preference number: 4 (lower is better)
Translates to: VGAVVRTDFSQCCIMRNMLPFVA*VQMQFL
Trigger: CAAGAACTGCATTTGAACTCAAGCTACAAAAGGCAA...CATATTTCTCATAATGCAGCATTGTGAGAAGTCAGTTCGGACCACTGCACCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR TCA 90 bp TGTTATACTGGAGCAGGAGAATATGGTATCTTGACGGAAGCACACTTGCTACCCCAGATCATCTATTTTTaGATGGTACTGTTGCTCTTG +
Preference number: 4 (lower is better)
Translates to: CYTGAGEYGILTEAHLLPQIIYF*MVLLLL
Trigger: CAAGAGCAACAGTACCATTCAAAAATAGATGATCTG...GGGTAGCAAGTGTGCTTCCGTCAAGATACCATATTCTCCTGCTCCAGTATAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR TCA 90 bp GAAGGAAGAAATTTCCTTGTTTGTTATCTTAGCCCTAGGGCCCAGAAAATGAGCCAGCTGCTTTCACAGTaGATGACAGAATGGATGAAA +
Preference number: 4 (lower is better)
Translates to: EGRNFLVCYLSPRAQKMSQLLSQ*MTEWMK
Trigger: TTTCATCCATTCTGTCATTCACTGTGAAAGCAGCTG...GCTCATTTTCTGGGCCCTAGGGCTAAGATAACAAACAAGGAAATTTCTTCCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR TCA 90 bp TTTTTATTGCCTGCAAGCTGTTATACTGGAGCAGGAGAATATGGTATCTTGACGTTCATAGTAATGCCCTaGAGTCCTCCTCCTTCTGAA +
Preference number: 4 (lower is better)
Translates to: FLLPASCYTGAGEYGILTFIVMP*SPPPSE
Trigger: TTCAGAAGGAGGAGGACTTCAGGGCATTACTATGAA...CGTCAAGATACCATATTCTCCTGCTCCAGTATAACAGCTTGCAGGCAATAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR TCA 90 bp GGTGCAGTGGTCCGAACTGACTTCTCACAATGCTGCATTATGAGAAATATGTATAAAAAGTTCATGTTCTaGTCACAAGCAGAGCCAAGG +
Preference number: 4 (lower is better)
Translates to: GAVVRTDFSQCCIMRNMYKKFMF*SQAEPR
Trigger: CCTTGGCTCTGCTTGTGATCAGAACATGAACTTTTT...ATACATATTTCTCATAATGCAGCATTGTGAGAAGTCAGTTCGGACCACTGCACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR TCA 90 bp ACTGACTTCTCACAATGCTGCATTATGAGAAATATGTATCTCGCTTTACACAGATGCAGTGGTCCGAACTaGCTTCTCACAATGCTGCAT +
Preference number: 4 (lower is better)
Translates to: TDFSQCCIMRNMYLALHRCSGPN*LLTMLH
Trigger: ATGCAGCATTGTGAGAAGTCAGTTCGGACCACTGCA...TCTGTGTAAAGCGAGATACATATTTCTCATAATGCAGCATTGTGAGAAGTCAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR TCA 90 bp GTTGGTGCAGTGGTCCGAACTGACTTCTCACAATGCTGCATTATGAGAAATATGTCCATACCATGTTTCTaGAAACGATCTGCATCTGTA +
Preference number: 4 (lower is better)
Translates to: VGAVVRTDFSQCCIMRNMSIPCF*KRSASV
Trigger: TACAGATGCAGATCGTTTTCAGAAACATGGTATGGA...CATATTTCTCATAATGCAGCATTGTGAGAAGTCAGTTCGGACCACTGCACCAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334010.11
ENST00000615869.4
CDS-3UTR GCA 90 bp CATTTTAACAAGGATACGACAGTGTTGGTGCAGTGGTCCGAACTGACTTCTCACCGTTCTTTCAGTAACTaGAACTGTTGTTTGTTAAGC +
Preference number: 4 (lower is better)
Translates to: HFNKDTTVLVQWSELTSHRSFSN*NCCLLS
Trigger: GCTTAACAAACAACAGTTGCAGTTACTGAAAGAACG...GTGAGAAGTCAGTTCGGACCACTGCACCAACACTGTCGTATCCTTGTTAAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR GCA 90 bp GTTGGTGCAGTGGTCCGAACTGACTTCTCACAATGCTGCATTATGAGAAATATGATAATAACTCCGAACTaGGTTGCAAAATGCTTCGTC +
Preference number: 4 (lower is better)
Translates to: VGAVVRTDFSQCCIMRNMIITPN*VAKCFV
Trigger: GACGAAGCATTTTGCAACGCAGTTCGGAGTTATTAT...CATATTTCTCATAATGCAGCATTGTGAGAAGTCAGTTCGGACCACTGCACCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR GCA 90 bp TGCCATTGGAGAGTTTGGGATAGCATGACTGGACATTTGAGGGTTTGGAGAAAAATAATAACTCCGAACTaGGTTGCAAAATGCTTCGTC +
Preference number: 4 (lower is better)
Translates to: CHWRVWDSMTGHLRVWRKIITPN*VAKCFV
Trigger: GACGAAGCATTTTGCAACGCAGTTCGGAGTTATTAT...TTTTCTCCAAACCCTCAAATGTCCAGTCATGCTATCCCAAACTCTCCAATGGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR GCA 90 bp TGCCATTGGAGAGTTTGGGATAGCATGACTGGACATTTGAGGGTTTGGAGAAAATCAACACTGTCTCTTTaGTCAAGCCATCTATTTCTG +
Preference number: 4 (lower is better)
Translates to: CHWRVWDSMTGHLRVWRKSTLSL*SSHLFL
Trigger: CAGAAATAGATGGCTTGAGCAAAGAGACAGTGTTGA...TTTTCTCCAAACCCTCAAATGTCCAGTCATGCTATCCCAAACTCTCCAATGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR GCA 90 bp ACTGACTTCTCACAATGCTGCATTATGAGAAATATGTATCTCGCTTTACACAGAGGCTGCTTGTTCATCTaGGTTATCCAGCTGACATGC +
Preference number: 4 (lower is better)
Translates to: TDFSQCCIMRNMYLALHRGCLFI*VIQLTC
Trigger: GCATGTCAGCTGGATAACGCAGATGAACAAGCAGCC...TCTGTGTAAAGCGAGATACATATTTCTCATAATGCAGCATTGTGAGAAGTCAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000615869.4
CDS-3UTR GCA 90 bp AGATTTTTATTGCCTGCAAGCTGTTATACTGGAGCAGGAGAATATGGTATCTTGCCTTCTGATCTGGGCTaGTTGTTCATCTGCGTTATC +
Preference number: 4 (lower is better)
Translates to: RFLLPASCYTGAGEYGILPSDLG*LFICVI
Trigger: GATAACGCAGATGAACAAGCAGCCCAGATCAGAAGG...CAAGATACCATATTCTCCTGCTCCAGTATAACAGCTTGCAGGCAATAAAAATCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR GCA 90 bp TTTTTATTGCCTGCAAGCTGTTATACTGGAGCAGGAGAATATGGTATCTTGACGATTTTATCTGCCAATTaGAGCCGGCCATCAAGTTCC +
Preference number: 4 (lower is better)
Translates to: FLLPASCYTGAGEYGILTILSAN*SRPSSS
Trigger: GGAACTTGATGGCCGGCTGCAATTGGCAGATAAAAT...CGTCAAGATACCATATTCTCCTGCTCCAGTATAACAGCTTGCAGGCAATAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR GCA 90 bp ATTTTTATTGCCTGCAAGCTGTTATACTGGAGCAGGAGAATATGGTATCTTGACCTTTGCCATTTTATCTaGCAATTGCAGCCGGCCATC +
Preference number: 4 (lower is better)
Translates to: IFIACKLLYWSRRIWYLDLCHFI*QLQPAI
Trigger: GATGGCCGGCTGCAATTGGCAGATAAAATGGCAAAG...GTCAAGATACCATATTCTCCTGCTCCAGTATAACAGCTTGCAGGCAATAAAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR GCA 90 bp TCATGTTCTGATCACAAGCAGAGCCAAGGTTCATTTTTAGGTCAAACTACACAACTTTGCCATTTTATCTaGCAATTGCAGCCGGCCATC +
Preference number: 4 (lower is better)
Translates to: SCSDHKQSQGSFLGQTTQLCHFI*QLQPAI
Trigger: GATGGCCGGCTGCAATTGGCAGATAAAATGGCAAAG...TTGTGTAGTTTGACCTAAAAATGAACCTTGGCTCTGCTTGTGATCAGAACATGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000615869.4
CDS-3UTR GCA 90 bp GAAGGAAGAAATTTCCTTGTTTGTTATCTTAGCCCTAGGGCCCAGAAAATGAGCACTGACTTCAGGCCTTaGACTTCCATTATGACAATC +
Preference number: 4 (lower is better)
Translates to: EGRNFLVCYLSPRAQKMSTDFRP*TSIMTI
Trigger: GATTGTCATAATGGAAGTGCAAGGCCTGAAGTCAGT...GCTCATTTTCTGGGCCCTAGGGCTAAGATAACAAACAAGGAAATTTCTTCCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR GCA 90 bp TGCCATTGGAGAGTTTGGGATAGCATGACTGGACATTTGAGGGTTTGGAGAAAAAAGCTTGCAGGGGTTTaGAGAAATAAACTCATCCAT +
Preference number: 4 (lower is better)
Translates to: CHWRVWDSMTGHLRVWRKKLAGV*RNKLIH
Trigger: ATGGATGAGTTTATTTCTGCAAACCCCTGCAAGCTT...TTTTCTCCAAACCCTCAAATGTCCAGTCATGCTATCCCAAACTCTCCAATGGCA
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR GCA 90 bp TCATGTTCTGATCACAAGCAGAGCCAAGGTTCATTTTTAGGTCAAACTACACAACCAGGCAAATGCCTCTaGATGATGCTCTTCATTCTG +
Preference number: 4 (lower is better)
Translates to: SCSDHKQSQGSFLGQTTQPGKCL*MMLFIL
Trigger: CAGAATGAAGAGCATCATGCAGAGGCATTTGCCTGG...TTGTGTAGTTTGACCTAAAAATGAACCTTGGCTCTGCTTGTGATCAGAACATGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000615869.4
CDS-3UTR GCA 90 bp ATTTTTATTGCCTGCAAGCTGTTATACTGGAGCAGGAGAATATGGTATCTTGACCCAGGCAAATGCCTCTaGATGATGCTCTTCATTCTG +
Preference number: 4 (lower is better)
Translates to: IFIACKLLYWSRRIWYLDPGKCL*MMLFIL
Trigger: CAGAATGAAGAGCATCATGCAGAGGCATTTGCCTGG...GTCAAGATACCATATTCTCCTGCTCCAGTATAACAGCTTGCAGGCAATAAAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000615869.4
CDS-3UTR GCA 90 bp TGTTATACTGGAGCAGGAGAATATGGTATCTTGACGGAAGCACACTTGCTACCCTCAAAGACAAACATTTaGAGTGCATCAAGCTTCCAA +
Preference number: 4 (lower is better)
Translates to: CYTGAGEYGILTEAHLLPSKTNI*SASSFQ
Trigger: TTGGAAGCTTGATGCACTGCAAATGTTTGTCTTTGA...GGGTAGCAAGTGTGCTTCCGTCAAGATACCATATTCTCCTGCTCCAGTATAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR GCA 90 bp GACAGTGTTGGTGCAGTGGTCCGAACTGACTTCTCACAATGCTGCATTATGAGAATTAGTTTAAGTCTTTaGTCTAAGTGGTGGGCAAAT +
Preference number: 4 (lower is better)
Translates to: DSVGAVVRTDFSQCCIMRISLSL*SKWWAN
Trigger: ATTTGCCCACCACTTAGAGCAAAGACTTAAACTAAT...TCTCATAATGCAGCATTGTGAGAAGTCAGTTCGGACCACTGCACCAACACTGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR GCA 90 bp TCATGTTCTGATCACAAGCAGAGCCAAGGTTCATTTTTAGGTCAAACTACACAAGGGCACAGAGTTTGGTaGTTTGCTTTTTGGCATCGA +
Preference number: 4 (lower is better)
Translates to: SCSDHKQSQGSFLGQTTQGHRVW*FAFWHR
Trigger: TCGATGCCAAAAAGCAAAGCACCAAACTCTGTGCCC...TTGTGTAGTTTGACCTAAAAATGAACCTTGGCTCTGCTTGTGATCAGAACATGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR GCA 90 bp CATTTTAACAAGGATACGACAGTGTTGGTGCAGTGGTCCGAACTGACTTCTCACTGGATGAAAAGAAAGTaGCTTCATCATACCTTGACA +
Preference number: 4 (lower is better)
Translates to: HFNKDTTVLVQWSELTSHWMKRK*LHHTLT
Trigger: TGTCAAGGTATGATGAAGGCACTTTCTTTTCATCCA...GTGAGAAGTCAGTTCGGACCACTGCACCAACACTGTCGTATCCTTGTTAAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR GCA 90 bp GACAGTGTTGGTGCAGTGGTCCGAACTGACTTCTCACAATGCTGCATTATGAGAACTGACTTCTCACAATaGTGCATTATGAGAAATATG +
Preference number: 4 (lower is better)
Translates to: DSVGAVVRTDFSQCCIMRTDFSQ*CIMRNM
Trigger: CATATTTCTCATAATGCAGCATTGTGAGAAGTCAGT...TCTCATAATGCAGCATTGTGAGAAGTCAGTTCGGACCACTGCACCAACACTGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR GCA 90 bp GACAGTGTTGGTGCAGTGGTCCGAACTGACTTCTCACAATGCTGCATTATGAGAAAACGTTTTCATAAATaGAGGGATACCTCCACTTAT +
Preference number: 4 (lower is better)
Translates to: DSVGAVVRTDFSQCCIMRKRFHK*RDTSTY
Trigger: ATAAGTGGAGGTATCCCTGCATTTATGAAAACGTTT...TCTCATAATGCAGCATTGTGAGAAGTCAGTTCGGACCACTGCACCAACACTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR GCA 90 bp CATTTTAACAAGGATACGACAGTGTTGGTGCAGTGGTCCGAACTGACTTCTCACAGAACATTCCCAAACTaGCTTTCAAAGATAGTGAGT +
Preference number: 4 (lower is better)
Translates to: HFNKDTTVLVQWSELTSHRTFPN*LSKIVS
Trigger: ACTCACTATCTTTGAAAGGCAGTTTGGGAATGTTCT...GTGAGAAGTCAGTTCGGACCACTGCACCAACACTGTCGTATCCTTGTTAAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR GCA 90 bp ATATGGTATCTTGACGGAAGCACACTTGCTACCCCACACCTGGGGATTACTTATAGAACATTCCCAAACTaGCTTTCAAAGATAGTGAGT +
Preference number: 4 (lower is better)
Translates to: IWYLDGSTLATPHLGITYRTFPN*LSKIVS
Trigger: ACTCACTATCTTTGAAAGGCAGTTTGGGAATGTTCT...ATAAGTAATCCCCAGGTGTGGGGTAGCAAGTGTGCTTCCGTCAAGATACCATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CCA 90 bp TCATGTTCTGATCACAAGCAGAGCCAAGGTTCATTTTTAGGTCAAACTACACAACACTCTGTACCATTCTaGCCACTCGGTCACTCTTTA +
Preference number: 4 (lower is better)
Translates to: SCSDHKQSQGSFLGQTTQHSVPF*PLGHSL
Trigger: TAAAGAGTGACCGAGTGGCCAGAATGGTACAGAGTG...TTGTGTAGTTTGACCTAAAAATGAACCTTGGCTCTGCTTGTGATCAGAACATGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CCA 90 bp TGTTATACTGGAGCAGGAGAATATGGTATCTTGACGGAAGCACACTTGCTACCCAAATGGCATCATATTTaGCTATCCATGAGCTCAACA +
Preference number: 4 (lower is better)
Translates to: CYTGAGEYGILTEAHLLPKWHHI*LSMSST
Trigger: TGTTGAGCTCATGGATAGCCAAATATGATGCCATTT...GGGTAGCAAGTGTGCTTCCGTCAAGATACCATATTCTCCTGCTCCAGTATAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CCA 90 bp ACTGACTTCTCACAATGCTGCATTATGAGAAATATGTATCTCGCTTTACACAGAAGTTCCCTTCTGATCTaGGCTGCTTGTTCATCTGCG +
Preference number: 4 (lower is better)
Translates to: TDFSQCCIMRNMYLALHRSSLLI*AACSSA
Trigger: CGCAGATGAACAAGCAGCCCAGATCAGAAGGGAACT...TCTGTGTAAAGCGAGATACATATTTCTCATAATGCAGCATTGTGAGAAGTCAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CCA 90 bp GGTGCAGTGGTCCGAACTGACTTCTCACAATGCTGCATTATGAGAAATATGTATAGTAAACAATTCGATTaGGAGCAACTGACTTCAGGC +
Preference number: 4 (lower is better)
Translates to: GAVVRTDFSQCCIMRNMYSKQFD*EQLTSG
Trigger: GCCTGAAGTCAGTTGCTCCCAATCGAATTGTTTACT...ATACATATTTCTCATAATGCAGCATTGTGAGAAGTCAGTTCGGACCACTGCACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CCA 90 bp GGTGCAGTGGTCCGAACTGACTTCTCACAATGCTGCATTATGAGAAATATGTATATGCTTCATATGTGCTaGTTTATCCATTCGCACTGC +
Preference number: 4 (lower is better)
Translates to: GAVVRTDFSQCCIMRNMYMLHMC*FIHSHC
Trigger: GCAGTGCGAATGGATAAACCAGCACATATGAAGCAT...ATACATATTTCTCATAATGCAGCATTGTGAGAAGTCAGTTCGGACCACTGCACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CCA 90 bp GAAGGAAGAAATTTCCTTGTTTGTTATCTTAGCCCTAGGGCCCAGAAAATGAGCATGCTTCATATGTGCTaGTTTATCCATTCGCACTGC +
Preference number: 4 (lower is better)
Translates to: EGRNFLVCYLSPRAQKMSMLHMC*FIHSHC
Trigger: GCAGTGCGAATGGATAAACCAGCACATATGAAGCAT...GCTCATTTTCTGGGCCCTAGGGCTAAGATAACAAACAAGGAAATTTCTTCCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CCA 90 bp GAAGGAAGAAATTTCCTTGTTTGTTATCTTAGCCCTAGGGCCCAGAAAATGAGCCTGTGGCCCTATACATaGCTTGAACCCATAATATTC +
Preference number: 4 (lower is better)
Translates to: EGRNFLVCYLSPRAQKMSLWPYT*LEPIIF
Trigger: GAATATTATGGGTTCAAGCCATGTATAGGGCCACAG...GCTCATTTTCTGGGCCCTAGGGCTAAGATAACAAACAAGGAAATTTCTTCCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CCA 90 bp TGCCATTGGAGAGTTTGGGATAGCATGACTGGACATTTGAGGGTTTGGAGAAAATATATGATTGACCTGTaGCCCTATACATGGCTTGAA +
Preference number: 4 (lower is better)
Translates to: CHWRVWDSMTGHLRVWRKYMIDL*PYTWLE
Trigger: TTCAAGCCATGTATAGGGCCACAGGTCAATCATATA...TTTTCTCCAAACCCTCAAATGTCCAGTCATGCTATCCCAAACTCTCCAATGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CCA 90 bp GTTGGTGCAGTGGTCCGAACTGACTTCTCACAATGCTGCATTATGAGAAATATGTATATGATTGACCTGTaGCCCTATACATGGCTTGAA +
Preference number: 4 (lower is better)
Translates to: VGAVVRTDFSQCCIMRNMYMIDL*PYTWLE
Trigger: TTCAAGCCATGTATAGGGCCACAGGTCAATCATATA...CATATTTCTCATAATGCAGCATTGTGAGAAGTCAGTTCGGACCACTGCACCAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CCA 90 bp AGATTTTTATTGCCTGCAAGCTGTTATACTGGAGCAGGAGAATATGGTATCTTGTCTAACACAAAGACTTaGCCAGGGCTAAACCATCCC +
Preference number: 4 (lower is better)
Translates to: RFLLPASCYTGAGEYGILSNTKT*PGLNHP
Trigger: GGGATGGTTTAGCCCTGGCCAAGTCTTTGTGTTAGA...CAAGATACCATATTCTCCTGCTCCAGTATAACAGCTTGCAGGCAATAAAAATCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CCA 90 bp ATATGGTATCTTGACGGAAGCACACTTGCTACCCCACACCTGGGGATTACTTATCTGCTGGTATGGGAGTaGCAATATCTTTCATTAAAA +
Preference number: 4 (lower is better)
Translates to: IWYLDGSTLATPHLGITYLLVWE*QYLSLK
Trigger: TTTTAATGAAAGATATTGCCACTCCCATACCAGCAG...ATAAGTAATCCCCAGGTGTGGGGTAGCAAGTGTGCTTCCGTCAAGATACCATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CCA 90 bp CATTTTAACAAGGATACGACAGTGTTGGTGCAGTGGTCCGAACTGACTTCTCACCTGCTGGTATGGGAGTaGCAATATCTTTCATTAAAA +
Preference number: 4 (lower is better)
Translates to: HFNKDTTVLVQWSELTSHLLVWE*QYLSLK
Trigger: TTTTAATGAAAGATATTGCCACTCCCATACCAGCAG...GTGAGAAGTCAGTTCGGACCACTGCACCAACACTGTCGTATCCTTGTTAAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CCA 90 bp TCATGTTCTGATCACAAGCAGAGCCAAGGTTCATTTTTAGGTCAAACTACACAACTTCACCTCTTCTGCTaGTATGGGAGTGGCAATATC +
Preference number: 4 (lower is better)
Translates to: SCSDHKQSQGSFLGQTTQLHLFC*YGSGNI
Trigger: GATATTGCCACTCCCATACCAGCAGAAGAGGTGAAG...TTGTGTAGTTTGACCTAAAAATGAACCTTGGCTCTGCTTGTGATCAGAACATGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CCA 90 bp ACTGACTTCTCACAATGCTGCATTATGAGAAATATGTATCTCGCTTTACACAGACTAGCAGGAGATGCCTaGTTCATGGTCTCTGTTTCC +
Preference number: 4 (lower is better)
Translates to: TDFSQCCIMRNMYLALHRLAGDA*FMVSVS
Trigger: GGAAACAGAGACCATGAACCAGGCATCTCCTGCTAG...TCTGTGTAAAGCGAGATACATATTTCTCATAATGCAGCATTGTGAGAAGTCAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313070.11
ENST00000462699.5
ENST00000615869.4
CDS-3UTR CCA 90 bp GAAGGAAGAAATTTCCTTGTTTGTTATCTTAGCCCTAGGGCCCAGAAAATGAGCTTGGAAGAGCTACATTaGGAAGACTGTTGGCGATAT +
Preference number: 4 (lower is better)
Translates to: EGRNFLVCYLSPRAQKMSLEELH*EDCWRY
Trigger: ATATCGCCAACAGTCTTCCCAATGTAGCTCTTCCAA...GCTCATTTTCTGGGCCCTAGGGCTAAGATAACAAACAAGGAAATTTCTTCCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CCA 90 bp GAAGGAAGAAATTTCCTTGTTTGTTATCTTAGCCCTAGGGCCCAGAAAATGAGCCAGACTTGGAACTTTTaGAAGAGCTACATTGGGAAG +
Preference number: 4 (lower is better)
Translates to: EGRNFLVCYLSPRAQKMSQTWNF*KSYIGK
Trigger: CTTCCCAATGTAGCTCTTCCAAAAGTTCCAAGTCTG...GCTCATTTTCTGGGCCCTAGGGCTAAGATAACAAACAAGGAAATTTCTTCCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CCA 90 bp CATTTTAACAAGGATACGACAGTGTTGGTGCAGTGGTCCGAACTGACTTCTCACAATGTTAGGAATCTGTaGAAGATTAAGAGGCAGACT +
Preference number: 4 (lower is better)
Translates to: HFNKDTTVLVQWSELTSHNVRNL*KIKRQT
Trigger: AGTCTGCCTCTTAATCTTCCACAGATTCCTAACATT...GTGAGAAGTCAGTTCGGACCACTGCACCAACACTGTCGTATCCTTGTTAAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR CCA 90 bp GAAGGAAGAAATTTCCTTGTTTGTTATCTTAGCCCTAGGGCCCAGAAAATGAGCTTGCTGAGCCATTGGTaGACTCATATAAAGAAGGCA +
Preference number: 4 (lower is better)
Translates to: EGRNFLVCYLSPRAQKMSLLSHW*THIKKA
Trigger: TGCCTTCTTTATATGAGTCCACCAATGGCTCAGCAA...GCTCATTTTCTGGGCCCTAGGGCTAAGATAACAAACAAGGAAATTTCTTCCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CCA 90 bp CCATTGGATAATCTAGTCTATATTTGGGTTTGGCAATCCTTTCATCCCAGGAATCTTTGCTCTAAGTGGTaGGCAAATTCCTGTTCTGGC +
Preference number: 4 (lower is better)
Translates to: PLDNLVYIWVWQSFHPRNLCSKW*ANSCSG
Trigger: GCCAGAACAGGAATTTGCCCACCACTTAGAGCAAAG...ATTCCTGGGATGAAAGGATTGCCAAACCCAAATATAGACTAGATTATCCAATGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR CCA 90 bp GGTGCAGTGGTCCGAACTGACTTCTCACAATGCTGCATTATGAGAAATATGTATAGTCTTTGCTCTAAGTaGTGGGCAAATTCCTGTTCT +
Preference number: 4 (lower is better)
Translates to: GAVVRTDFSQCCIMRNMYSLCSK*WANSCS
Trigger: AGAACAGGAATTTGCCCACCACTTAGAGCAAAGACT...ATACATATTTCTCATAATGCAGCATTGTGAGAAGTCAGTTCGGACCACTGCACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR CCA 90 bp AGATTTTTATTGCCTGCAAGCTGTTATACTGGAGCAGGAGAATATGGTATCTTGAGTGCAAACGGAAGCTaGAATGCGCAAGTCAGTTGT +
Preference number: 4 (lower is better)
Translates to: RFLLPASCYTGAGEYGILSANGS*NAQVSC
Trigger: ACAACTGACTTGCGCATTCCAGCTTCCGTTTGCACT...CAAGATACCATATTCTCCTGCTCCAGTATAACAGCTTGCAGGCAATAAAAATCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR CCA 90 bp GGTGCAGTGGTCCGAACTGACTTCTCACAATGCTGCATTATGAGAAATATGTATGTCTATATTTGGGTTTaGCAATCCTTTCATCCCAGG +
Preference number: 4 (lower is better)
Translates to: GAVVRTDFSQCCIMRNMYVYIWV*QSFHPR
Trigger: CCTGGGATGAAAGGATTGCCAAACCCAAATATAGAC...ATACATATTTCTCATAATGCAGCATTGTGAGAAGTCAGTTCGGACCACTGCACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR CCA 90 bp TTTTTATTGCCTGCAAGCTGTTATACTGGAGCAGGAGAATATGGTATCTTGACGCCACTTATTACACCATaGGAGAACGAATCTGGAGGT +
Preference number: 4 (lower is better)
Translates to: FLLPASCYTGAGEYGILTPLITP*ENESGG
Trigger: ACCTCCAGATTCGTTCTCCCATGGTGTAATAAGTGG...CGTCAAGATACCATATTCTCCTGCTCCAGTATAACAGCTTGCAGGCAATAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CCA 90 bp TTTTTATTGCCTGCAAGCTGTTATACTGGAGCAGGAGAATATGGTATCTTGACGTGCCATTGGAGAGTTTaGGATAGCATGACTGGACAT +
Preference number: 4 (lower is better)
Translates to: FLLPASCYTGAGEYGILTCHWRV*DSMTGH
Trigger: ATGTCCAGTCATGCTATCCCAAACTCTCCAATGGCA...CGTCAAGATACCATATTCTCCTGCTCCAGTATAACAGCTTGCAGGCAATAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CCA 90 bp ACTGACTTCTCACAATGCTGCATTATGAGAAATATGTATCTCGCTTTACACAGACAGAGCAATGTGTCGTaGAACAGCAAGCTTGGGGAT +
Preference number: 4 (lower is better)
Translates to: TDFSQCCIMRNMYLALHRQSNVS*NSKLGD
Trigger: ATCCCCAAGCTTGCTGTTCCACGACACATTGCTCTG...TCTGTGTAAAGCGAGATACATATTTCTCATAATGCAGCATTGTGAGAAGTCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
3UTR CAA 72 bp GAGAACATTCCCAAACTGCCTTTCAAAGATAGTGAGTaGGTAGAGTTAGTCTTTAATCCCGGAAGAAGGAAG +
Preference number: 4 (lower is better)
Translates to: ENIPKLPFKDSE*VELVFNPGRRK
Trigger: CTTCCTTCTTCCGGGATTAAAGACTAACTCTACCAACTCACTATCTTTGAAAGGCAGTTTGGGAATGTTCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR TCA 90 bp ACTGACTTCTCACAATGCTGCATTATGAGAAATATGTATCTCGCTTTACACAGACATCAAGTTCCCTTCTaGTCTGGGCTGCTTGTTCAT +
Preference number: 4 (lower is better)
Translates to: TDFSQCCIMRNMYLALHRHQVPF*SGLLVH
Trigger: ATGAACAAGCAGCCCAGATCAGAAGGGAACTTGATG...TCTGTGTAAAGCGAGATACATATTTCTCATAATGCAGCATTGTGAGAAGTCAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000615869.4
CDS-3UTR TCA 90 bp ACTGACTTCTCACAATGCTGCATTATGAGAAATATGTATCTCGCTTTACACAGATACCACGTCGGACTTTaGCAGCTGAATCTCATTCTC +
Preference number: 4 (lower is better)
Translates to: TDFSQCCIMRNMYLALHRYHVGL*QLNLIL
Trigger: GAGAATGAGATTCAGCTGTCAAAGTCCGACGTGGTA...TCTGTGTAAAGCGAGATACATATTTCTCATAATGCAGCATTGTGAGAAGTCAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000615869.4
CDS-3UTR TCA 90 bp TTGGATAATCTAGTCTATATTTGGGTTTGGCAATCCTTTCATCCCAGGAATATATCGGCCTGGTCTGTCTaGAGTTTTTCTCCTTCCACT +
Preference number: 4 (lower is better)
Translates to: LDNLVYIWVWQSFHPRNISAWSV*SFSPST
Trigger: AGTGGAAGGAGAAAAACTTCAGACAGACCAGGCCGA...TATATTCCTGGGATGAAAGGATTGCCAAACCCAAATATAGACTAGATTATCCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR TCA 90 bp GACTTCTCACAATGCTGCATTATGAGAAATATGTATCTCGCTTTACACAGAAAATCGGCCTGGTCTGTCTaGAGTTTTTCTCCTTCCACT +
Preference number: 4 (lower is better)
Translates to: DFSQCCIMRNMYLALHRKSAWSV*SFSPST
Trigger: AGTGGAAGGAGAAAAACTTCAGACAGACCAGGCCGA...TTTTCTGTGTAAAGCGAGATACATATTTCTCATAATGCAGCATTGTGAGAAGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000615869.4
CDS-3UTR TCA 90 bp ATTTTTATTGCCTGCAAGCTGTTATACTGGAGCAGGAGAATATGGTATCTTGACGCCCTATACATGGCTTaGACCCATAATATTCTGTCC +
Preference number: 4 (lower is better)
Translates to: IFIACKLLYWSRRIWYLDALYMA*THNILS
Trigger: GGACAGAATATTATGGGTTCAAGCCATGTATAGGGC...GTCAAGATACCATATTCTCCTGCTCCAGTATAACAGCTTGCAGGCAATAAAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR TCA 90 bp TCATGTTCTGATCACAAGCAGAGCCAAGGTTCATTTTTAGGTCAAACTACACAAGACAGCACCATTTTCTaGATGTTCCATCAGTTCTGC +
Preference number: 4 (lower is better)
Translates to: SCSDHKQSQGSFLGQTTQDSTIF*MFHQFC
Trigger: GCAGAACTGATGGAACATTCAGAAAATGGTGCTGTC...TTGTGTAGTTTGACCTAAAAATGAACCTTGGCTCTGCTTGTGATCAGAACATGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000615869.4
CDS-3UTR TCA 90 bp GAAGGAAGAAATTTCCTTGTTTGTTATCTTAGCCCTAGGGCCCAGAAAATGAGCTTGCCTTTTGTAGCTTaGGTTCAAATGCAGTTCTTG +
Preference number: 4 (lower is better)
Translates to: EGRNFLVCYLSPRAQKMSLPFVA*VQMQFL
Trigger: CAAGAACTGCATTTGAACTCAAGCTACAAAAGGCAA...GCTCATTTTCTGGGCCCTAGGGCTAAGATAACAAACAAGGAAATTTCTTCCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR TCA 90 bp GACTTCTCACAATGCTGCATTATGAGAAATATGTATCTCGCTTTACACAGAAAAGCCTTCATCATACCTTaGCAGCTTAGACAACACGCC +
Preference number: 4 (lower is better)
Translates to: DFSQCCIMRNMYLALHRKAFIIP*QLRQHA
Trigger: GGCGTGTTGTCTAAGCTGTCAAGGTATGATGAAGGC...TTTTCTGTGTAAAGCGAGATACATATTTCTCATAATGCAGCATTGTGAGAAGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR TCA 90 bp CCATTGGATAATCTAGTCTATATTTGGGTTTGGCAATCCTTTCATCCCAGGAATTCAACCACACGCAAATaGCTTTCATGGAACTGCTGT +
Preference number: 4 (lower is better)
Translates to: PLDNLVYIWVWQSFHPRNSTTRK*LSWNCC
Trigger: ACAGCAGTTCCATGAAAGTCATTTGCGTGTGGTTGA...ATTCCTGGGATGAAAGGATTGCCAAACCCAAATATAGACTAGATTATCCAATGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR TCA 90 bp AGATTTTTATTGCCTGCAAGCTGTTATACTGGAGCAGGAGAATATGGTATCTTGTTCATAGTAATGCCCTaGAGTCCTCCTCCTTCTGAA +
Preference number: 4 (lower is better)
Translates to: RFLLPASCYTGAGEYGILFIVMP*SPPPSE
Trigger: TTCAGAAGGAGGAGGACTTCAGGGCATTACTATGAA...CAAGATACCATATTCTCCTGCTCCAGTATAACAGCTTGCAGGCAATAAAAATCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR TCA 90 bp TCATGTTCTGATCACAAGCAGAGCCAAGGTTCATTTTTAGGTCAAACTACACAATTCATAGTAATGCCCTaGAGTCCTCCTCCTTCTGAA +
Preference number: 4 (lower is better)
Translates to: SCSDHKQSQGSFLGQTTQFIVMP*SPPPSE
Trigger: TTCAGAAGGAGGAGGACTTCAGGGCATTACTATGAA...TTGTGTAGTTTGACCTAAAAATGAACCTTGGCTCTGCTTGTGATCAGAACATGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR TCA 90 bp TGCCATTGGAGAGTTTGGGATAGCATGACTGGACATTTGAGGGTTTGGAGAAAACACAATGCTGCATTATaGGAAATATGTATCTCGCTT +
Preference number: 4 (lower is better)
Translates to: CHWRVWDSMTGHLRVWRKHNAAL*EICISL
Trigger: AAGCGAGATACATATTTCTCATAATGCAGCATTGTG...TTTTCTCCAAACCCTCAAATGTCCAGTCATGCTATCCCAAACTCTCCAATGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR TCA 90 bp GACTTCTCACAATGCTGCATTATGAGAAATATGTATCTCGCTTTACACAGAAAATGCAGTGGTCCGAACTaGCTTCTCACAATGCTGCAT +
Preference number: 4 (lower is better)
Translates to: DFSQCCIMRNMYLALHRKCSGPN*LLTMLH
Trigger: ATGCAGCATTGTGAGAAGTCAGTTCGGACCACTGCA...TTTTCTGTGTAAAGCGAGATACATATTTCTCATAATGCAGCATTGTGAGAAGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR TCA 90 bp ATTTTTATTGCCTGCAAGCTGTTATACTGGAGCAGGAGAATATGGTATCTTGACGAGAATATGGTATCTTaGCGGAAGCACACTTGCTAC +
Preference number: 4 (lower is better)
Translates to: IFIACKLLYWSRRIWYLDENMVS*RKHTCY
Trigger: GTAGCAAGTGTGCTTCCGTCAAGATACCATATTCTC...GTCAAGATACCATATTCTCCTGCTCCAGTATAACAGCTTGCAGGCAATAAAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR GCA 90 bp TCATGTTCTGATCACAAGCAGAGCCAAGGTTCATTTTTAGGTCAAACTACACAAAACTCCGAACTGCGTTaGAAAATGCTTCGTCAGCTA +
Preference number: 4 (lower is better)
Translates to: SCSDHKQSQGSFLGQTTQNSELR*KMLRQL
Trigger: TAGCTGACGAAGCATTTTGCAACGCAGTTCGGAGTT...TTGTGTAGTTTGACCTAAAAATGAACCTTGGCTCTGCTTGTGATCAGAACATGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000615869.4
CDS-3UTR GCA 90 bp CCATTGGATAATCTAGTCTATATTTGGGTTTGGCAATCCTTTCATCCCAGGAATAACTCCGAACTGCGTTaGAAAATGCTTCGTCAGCTA +
Preference number: 4 (lower is better)
Translates to: PLDNLVYIWVWQSFHPRNNSELR*KMLRQL
Trigger: TAGCTGACGAAGCATTTTGCAACGCAGTTCGGAGTT...ATTCCTGGGATGAAAGGATTGCCAAACCCAAATATAGACTAGATTATCCAATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR GCA 90 bp AGATTTTTATTGCCTGCAAGCTGTTATACTGGAGCAGGAGAATATGGTATCTTGAACTCCGAACTGCGTTaGAAAATGCTTCGTCAGCTA +
Preference number: 4 (lower is better)
Translates to: RFLLPASCYTGAGEYGILNSELR*KMLRQL
Trigger: TAGCTGACGAAGCATTTTGCAACGCAGTTCGGAGTT...CAAGATACCATATTCTCCTGCTCCAGTATAACAGCTTGCAGGCAATAAAAATCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR GCA 90 bp GGTGCAGTGGTCCGAACTGACTTCTCACAATGCTGCATTATGAGAAATATGTATATAATAACTCCGAACTaGGTTGCAAAATGCTTCGTC +
Preference number: 4 (lower is better)
Translates to: GAVVRTDFSQCCIMRNMYIITPN*VAKCFV
Trigger: GACGAAGCATTTTGCAACGCAGTTCGGAGTTATTAT...ATACATATTTCTCATAATGCAGCATTGTGAGAAGTCAGTTCGGACCACTGCACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000615869.4
CDS-3UTR GCA 90 bp ACTGACTTCTCACAATGCTGCATTATGAGAAATATGTATCTCGCTTTACACAGACCTTCTGATCTGGGCTaGTTGTTCATCTGCGTTATC +
Preference number: 4 (lower is better)
Translates to: TDFSQCCIMRNMYLALHRPSDLG*LFICVI
Trigger: GATAACGCAGATGAACAAGCAGCCCAGATCAGAAGG...TCTGTGTAAAGCGAGATACATATTTCTCATAATGCAGCATTGTGAGAAGTCAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000615869.4
CDS-3UTR GCA 90 bp GGTGCAGTGGTCCGAACTGACTTCTCACAATGCTGCATTATGAGAAATATGTATACTATGCTTCATATGTaGTGGTTTATCCATTCGCAC +
Preference number: 4 (lower is better)
Translates to: GAVVRTDFSQCCIMRNMYTMLHM*WFIHSH
Trigger: GTGCGAATGGATAAACCAGCACATATGAAGCATAGT...ATACATATTTCTCATAATGCAGCATTGTGAGAAGTCAGTTCGGACCACTGCACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000615869.4
CDS-3UTR GCA 90 bp GAAGGAAGAAATTTCCTTGTTTGTTATCTTAGCCCTAGGGCCCAGAAAATGAGCACTATGCTTCATATGTaGTGGTTTATCCATTCGCAC +
Preference number: 4 (lower is better)
Translates to: EGRNFLVCYLSPRAQKMSTMLHM*WFIHSH
Trigger: GTGCGAATGGATAAACCAGCACATATGAAGCATAGT...GCTCATTTTCTGGGCCCTAGGGCTAAGATAACAAACAAGGAAATTTCTTCCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR GCA 90 bp CATTTTAACAAGGATACGACAGTGTTGGTGCAGTGGTCCGAACTGACTTCTCACTACAGATATCCACTATaGTTCATATGTGCTGGTTTA +
Preference number: 4 (lower is better)
Translates to: HFNKDTTVLVQWSELTSHYRYPL*FICAGL
Trigger: TAAACCAGCACATATGAAGCATAGTGGATATCTGTA...GTGAGAAGTCAGTTCGGACCACTGCACCAACACTGTCGTATCCTTGTTAAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR GCA 90 bp CCATTGGATAATCTAGTCTATATTTGGGTTTGGCAATCCTTTCATCCCAGGAATAGAAAGCTGAGCATCTaGATGGAGAGTTCCTCCTTT +
Preference number: 4 (lower is better)
Translates to: PLDNLVYIWVWQSFHPRNRKLSI*MESSSF
Trigger: AAAGGAGGAACTCTCCATGCAGATGCTCAGCTTTCT...ATTCCTGGGATGAAAGGATTGCCAAACCCAAATATAGACTAGATTATCCAATGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR GCA 90 bp GGTGCAGTGGTCCGAACTGACTTCTCACAATGCTGCATTATGAGAAATATGTATAAGCTTGCAGGGGTTTaGAGAAATAAACTCATCCAT +
Preference number: 4 (lower is better)
Translates to: GAVVRTDFSQCCIMRNMYKLAGV*RNKLIH
Trigger: ATGGATGAGTTTATTTCTGCAAACCCCTGCAAGCTT...ATACATATTTCTCATAATGCAGCATTGTGAGAAGTCAGTTCGGACCACTGCACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000615869.4
CDS-3UTR GCA 90 bp GAAGGAAGAAATTTCCTTGTTTGTTATCTTAGCCCTAGGGCCCAGAAAATGAGCAAGCTTGCAGGGGTTTaGAGAAATAAACTCATCCAT +
Preference number: 4 (lower is better)
Translates to: EGRNFLVCYLSPRAQKMSKLAGV*RNKLIH
Trigger: ATGGATGAGTTTATTTCTGCAAACCCCTGCAAGCTT...GCTCATTTTCTGGGCCCTAGGGCTAAGATAACAAACAAGGAAATTTCTTCCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR GCA 90 bp TTTTTATTGCCTGCAAGCTGTTATACTGGAGCAGGAGAATATGGTATCTTGACGATGTTCCATCAGTTCTaGAAGGTAGCAGAGATGTCT +
Preference number: 4 (lower is better)
Translates to: FLLPASCYTGAGEYGILTMFHQF*KVAEMS
Trigger: AGACATCTCTGCTACCTTGCAGAACTGATGGAACAT...CGTCAAGATACCATATTCTCCTGCTCCAGTATAACAGCTTGCAGGCAATAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR GCA 90 bp TCATGTTCTGATCACAAGCAGAGCCAAGGTTCATTTTTAGGTCAAACTACACAAGCTGTAAGACTTCTATaGAGAGCTCTGCCAGATGAA +
Preference number: 4 (lower is better)
Translates to: SCSDHKQSQGSFLGQTTQAVRLL*RALPDE
Trigger: TTCATCTGGCAGAGCTCTGCATAGAAGTCTTACAGC...TTGTGTAGTTTGACCTAAAAATGAACCTTGGCTCTGCTTGTGATCAGAACATGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR GCA 90 bp CCATTGGATAATCTAGTCTATATTTGGGTTTGGCAATCCTTTCATCCCAGGAATGCTGTAAGACTTCTATaGAGAGCTCTGCCAGATGAA +
Preference number: 4 (lower is better)
Translates to: PLDNLVYIWVWQSFHPRNAVRLL*RALPDE
Trigger: TTCATCTGGCAGAGCTCTGCATAGAAGTCTTACAGC...ATTCCTGGGATGAAAGGATTGCCAAACCCAAATATAGACTAGATTATCCAATGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR GCA 90 bp TTTTTATTGCCTGCAAGCTGTTATACTGGAGCAGGAGAATATGGTATCTTGACGATATTCTTGACAGGCTaGCATGTCTCCTGCTCAAAA +
Preference number: 4 (lower is better)
Translates to: FLLPASCYTGAGEYGILTIFLTG*HVSCSK
Trigger: TTTTGAGCAGGAGACATGGCAGCCTGTCAAGAATAT...CGTCAAGATACCATATTCTCCTGCTCCAGTATAACAGCTTGCAGGCAATAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR GCA 90 bp TGCCATTGGAGAGTTTGGGATAGCATGACTGGACATTTGAGGGTTTGGAGAAAATCAAAGACAAACATTTaGAGTGCATCAAGCTTCCAA +
Preference number: 4 (lower is better)
Translates to: CHWRVWDSMTGHLRVWRKSKTNI*SASSFQ
Trigger: TTGGAAGCTTGATGCACTGCAAATGTTTGTCTTTGA...TTTTCTCCAAACCCTCAAATGTCCAGTCATGCTATCCCAAACTCTCCAATGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR GCA 90 bp CATTTTAACAAGGATACGACAGTGTTGGTGCAGTGGTCCGAACTGACTTCTCACATTAGTTTAAGTCTTTaGTCTAAGTGGTGGGCAAAT +
Preference number: 4 (lower is better)
Translates to: HFNKDTTVLVQWSELTSHISLSL*SKWWAN
Trigger: ATTTGCCCACCACTTAGAGCAAAGACTTAAACTAAT...GTGAGAAGTCAGTTCGGACCACTGCACCAACACTGTCGTATCCTTGTTAAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR GCA 90 bp TCATGTTCTGATCACAAGCAGAGCCAAGGTTCATTTTTAGGTCAAACTACACAAAAACGGAAGCTGGAATaGGCAAGTCAGTTGTTTTGC +
Preference number: 4 (lower is better)
Translates to: SCSDHKQSQGSFLGQTTQKRKLE*ASQLFC
Trigger: GCAAAACAACTGACTTGCGCATTCCAGCTTCCGTTT...TTGTGTAGTTTGACCTAAAAATGAACCTTGGCTCTGCTTGTGATCAGAACATGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR GCA 90 bp AGATTTTTATTGCCTGCAAGCTGTTATACTGGAGCAGGAGAATATGGTATCTTGAAACGGAAGCTGGAATaGGCAAGTCAGTTGTTTTGC +
Preference number: 4 (lower is better)
Translates to: RFLLPASCYTGAGEYGILKRKLE*ASQLFC
Trigger: GCAAAACAACTGACTTGCGCATTCCAGCTTCCGTTT...CAAGATACCATATTCTCCTGCTCCAGTATAACAGCTTGCAGGCAATAAAAATCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR GCA 90 bp GGTGCAGTGGTCCGAACTGACTTCTCACAATGCTGCATTATGAGAAATATGTATCAGAGTTTGGTGCTTTaGTTTTTGGCATCGACTAAT +
Preference number: 4 (lower is better)
Translates to: GAVVRTDFSQCCIMRNMYQSLVL*FLASTN
Trigger: ATTAGTCGATGCCAAAAAGCAAAGCACCAAACTCTG...ATACATATTTCTCATAATGCAGCATTGTGAGAAGTCAGTTCGGACCACTGCACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR GCA 90 bp ACTGACTTCTCACAATGCTGCATTATGAGAAATATGTATCTCGCTTTACACAGAGGGCACAGAGTTTGGTaGTTTGCTTTTTGGCATCGA +
Preference number: 4 (lower is better)
Translates to: TDFSQCCIMRNMYLALHRGHRVW*FAFWHR
Trigger: TCGATGCCAAAAAGCAAAGCACCAAACTCTGTGCCC...TCTGTGTAAAGCGAGATACATATTTCTCATAATGCAGCATTGTGAGAAGTCAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR GCA 90 bp GAAGGAAGAAATTTCCTTGTTTGTTATCTTAGCCCTAGGGCCCAGAAAATGAGCCATAATATAGGTGTCTaGCAGATCCATTCCTGGTTT +
Preference number: 4 (lower is better)
Translates to: EGRNFLVCYLSPRAQKMSHNIGV*QIHSWF
Trigger: AAACCAGGAATGGATCTGGCAGACACCTATATTATG...GCTCATTTTCTGGGCCCTAGGGCTAAGATAACAAACAAGGAAATTTCTTCCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR GCA 90 bp TGTTATACTGGAGCAGGAGAATATGGTATCTTGACGGAAGCACACTTGCTACCCTACCTCCACTTATTCTaGATTAACTGCCTTCATTTA +
Preference number: 4 (lower is better)
Translates to: CYTGAGEYGILTEAHLLPYLHLF*INCLHL
Trigger: TAAATGAAGGCAGTTAATGCAGAATAAGTGGAGGTA...GGGTAGCAAGTGTGCTTCCGTCAAGATACCATATTCTCCTGCTCCAGTATAACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR GCA 90 bp TGTTATACTGGAGCAGGAGAATATGGTATCTTGACGGAAGCACACTTGCTACCCAAACGTTTTCATAAATaGAGGGATACCTCCACTTAT +
Preference number: 4 (lower is better)
Translates to: CYTGAGEYGILTEAHLLPKRFHK*RDTSTY
Trigger: ATAAGTGGAGGTATCCCTGCATTTATGAAAACGTTT...GGGTAGCAAGTGTGCTTCCGTCAAGATACCATATTCTCCTGCTCCAGTATAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CCA 90 bp ACTGACTTCTCACAATGCTGCATTATGAGAAATATGTATCTCGCTTTACACAGACCATTGAGGAAGGCCTaGAACCGTTCTTTCAGTAAC +
Preference number: 4 (lower is better)
Translates to: TDFSQCCIMRNMYLALHRPLRKA*NRSFSN
Trigger: GTTACTGAAAGAACGGTTCCAGGCCTTCCTCAATGG...TCTGTGTAAAGCGAGATACATATTTCTCATAATGCAGCATTGTGAGAAGTCAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CCA 90 bp ACTGACTTCTCACAATGCTGCATTATGAGAAATATGTATCTCGCTTTACACAGACACTCTGTACCATTCTaGCCACTCGGTCACTCTTTA +
Preference number: 4 (lower is better)
Translates to: TDFSQCCIMRNMYLALHRHSVPF*PLGHSL
Trigger: TAAAGAGTGACCGAGTGGCCAGAATGGTACAGAGTG...TCTGTGTAAAGCGAGATACATATTTCTCATAATGCAGCATTGTGAGAAGTCAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CCA 90 bp TCATGTTCTGATCACAAGCAGAGCCAAGGTTCATTTTTAGGTCAAACTACACAACAAGCCATCTATTTCTaGCAAACTCCGCACACGTTT +
Preference number: 4 (lower is better)
Translates to: SCSDHKQSQGSFLGQTTQQAIYF*QTPHTF
Trigger: AAACGTGTGCGGAGTTTGCCAGAAATAGATGGCTTG...TTGTGTAGTTTGACCTAAAAATGAACCTTGGCTCTGCTTGTGATCAGAACATGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CCA 90 bp TTTTTATTGCCTGCAAGCTGTTATACTGGAGCAGGAGAATATGGTATCTTGACGTTGGAAGAGCTACATTaGGAAGACTGTTGGCGATAT +
Preference number: 4 (lower is better)
Translates to: FLLPASCYTGAGEYGILTLEELH*EDCWRY
Trigger: ATATCGCCAACAGTCTTCCCAATGTAGCTCTTCCAA...CGTCAAGATACCATATTCTCCTGCTCCAGTATAACAGCTTGCAGGCAATAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR CCA 90 bp ACTGACTTCTCACAATGCTGCATTATGAGAAATATGTATCTCGCTTTACACAGAAGTGCAAACGGAAGCTaGAATGCGCAAGTCAGTTGT +
Preference number: 4 (lower is better)
Translates to: TDFSQCCIMRNMYLALHRSANGS*NAQVSC
Trigger: ACAACTGACTTGCGCATTCCAGCTTCCGTTTGCACT...TCTGTGTAAAGCGAGATACATATTTCTCATAATGCAGCATTGTGAGAAGTCAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR CCA 90 bp TGTTATACTGGAGCAGGAGAATATGGTATCTTGACGGAAGCACACTTGCTACCCATCCATTCCTGGTTTTaGAACATCAACATATTTTGC +
Preference number: 4 (lower is better)
Translates to: CYTGAGEYGILTEAHLLPIHSWF*NINIFC
Trigger: GCAAAATATGTTGATGTTCCAAAACCAGGAATGGAT...GGGTAGCAAGTGTGCTTCCGTCAAGATACCATATTCTCCTGCTCCAGTATAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR CCA 90 bp ATATGGTATCTTGACGGAAGCACACTTGCTACCCCACACCTGGGGATTACTTATTCTCGAAGAATATCTTaGTTTTGCCGAACAAACATA +
Preference number: 4 (lower is better)
Translates to: IWYLDGSTLATPHLGITYSRRIS*FCRTNI
Trigger: TATGTTTGTTCGGCAAAACCAAGATATTCTTCGAGA...ATAAGTAATCCCCAGGTGTGGGGTAGCAAGTGTGCTTCCGTCAAGATACCATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR CCA 90 bp CATTTTAACAAGGATACGACAGTGTTGGTGCAGTGGTCCGAACTGACTTCTCACTCTCGAAGAATATCTTaGTTTTGCCGAACAAACATA +
Preference number: 4 (lower is better)
Translates to: HFNKDTTVLVQWSELTSHSRRIS*FCRTNI
Trigger: TATGTTTGTTCGGCAAAACCAAGATATTCTTCGAGA...GTGAGAAGTCAGTTCGGACCACTGCACCAACACTGTCGTATCCTTGTTAAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR CCA 90 bp TTGGATAATCTAGTCTATATTTGGGTTTGGCAATCCTTTCATCCCAGGAATATAACAGTGTTGGTGCAGTaGTCCGAACTGACTTCTCAC +
Preference number: 4 (lower is better)
Translates to: LDNLVYIWVWQSFHPRNITVLVQ*SELTSH
Trigger: GTGAGAAGTCAGTTCGGACCACTGCACCAACACTGT...TATATTCCTGGGATGAAAGGATTGCCAAACCCAAATATAGACTAGATTATCCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR CCA 90 bp TTTTTATTGCCTGCAAGCTGTTATACTGGAGCAGGAGAATATGGTATCTTGACGGTCTATATTTGGGTTTaGCAATCCTTTCATCCCAGG +
Preference number: 4 (lower is better)
Translates to: FLLPASCYTGAGEYGILTVYIWV*QSFHPR
Trigger: CCTGGGATGAAAGGATTGCCAAACCCAAATATAGAC...CGTCAAGATACCATATTCTCCTGCTCCAGTATAACAGCTTGCAGGCAATAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR CCA 90 bp TTTTTATTGCCTGCAAGCTGTTATACTGGAGCAGGAGAATATGGTATCTTGACGTTGCTACCCCACACCTaGGGATTACTTATAGTTGAA +
Preference number: 4 (lower is better)
Translates to: FLLPASCYTGAGEYGILTLLPHT*GLLIVE
Trigger: TTCAACTATAAGTAATCCCCAGGTGTGGGGTAGCAA...CGTCAAGATACCATATTCTCCTGCTCCAGTATAACAGCTTGCAGGCAATAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR CCA 90 bp GGTGCAGTGGTCCGAACTGACTTCTCACAATGCTGCATTATGAGAAATATGTATTGCAAGCTGTTATACTaGAGCAGGAGAATATGGTAT +
Preference number: 4 (lower is better)
Translates to: GAVVRTDFSQCCIMRNMYCKLLY*SRRIWY
Trigger: ATACCATATTCTCCTGCTCCAGTATAACAGCTTGCA...ATACATATTTCTCATAATGCAGCATTGTGAGAAGTCAGTTCGGACCACTGCACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR CCA 90 bp CCATTGGATAATCTAGTCTATATTTGGGTTTGGCAATCCTTTCATCCCAGGAATCCACTTATTACACCATaGGAGAACGAATCTGGAGGT +
Preference number: 4 (lower is better)
Translates to: PLDNLVYIWVWQSFHPRNPLITP*ENESGG
Trigger: ACCTCCAGATTCGTTCTCCCATGGTGTAATAAGTGG...ATTCCTGGGATGAAAGGATTGCCAAACCCAAATATAGACTAGATTATCCAATGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CCA 90 bp ATTTTTATTGCCTGCAAGCTGTTATACTGGAGCAGGAGAATATGGTATCTTGACTGCCATTGGAGAGTTTaGGATAGCATGACTGGACAT +
Preference number: 4 (lower is better)
Translates to: IFIACKLLYWSRRIWYLDCHWRV*DSMTGH
Trigger: ATGTCCAGTCATGCTATCCCAAACTCTCCAATGGCA...GTCAAGATACCATATTCTCCTGCTCCAGTATAACAGCTTGCAGGCAATAAAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CCA 90 bp TTGGATAATCTAGTCTATATTTGGGTTTGGCAATCCTTTCATCCCAGGAATATATGGGGATGGTGCCATTaGAGAGTTTGGGATAGCATG +
Preference number: 4 (lower is better)
Translates to: LDNLVYIWVWQSFHPRNIWGWCH*RVWDSM
Trigger: CATGCTATCCCAAACTCTCCAATGGCACCATCCCCA...TATATTCCTGGGATGAAAGGATTGCCAAACCCAAATATAGACTAGATTATCCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CCA 90 bp GACTTCTCACAATGCTGCATTATGAGAAATATGTATCTCGCTTTACACAGAAAATGGGGATGGTGCCATTaGAGAGTTTGGGATAGCATG +
Preference number: 4 (lower is better)
Translates to: DFSQCCIMRNMYLALHRKWGWCH*RVWDSM
Trigger: CATGCTATCCCAAACTCTCCAATGGCACCATCCCCA...TTTTCTGTGTAAAGCGAGATACATATTTCTCATAATGCAGCATTGTGAGAAGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CCA 90 bp TCATGTTCTGATCACAAGCAGAGCCAAGGTTCATTTTTAGGTCAAACTACACAACTAGCAGGAGATGCCTaGTTCATGGTCTCTTCTATT +
Preference number: 4 (lower is better)
Translates to: SCSDHKQSQGSFLGQTTQLAGDA*FMVSSI
Trigger: AATAGAAGAGACCATGAACCAGGCATCTCCTGCTAG...TTGTGTAGTTTGACCTAAAAATGAACCTTGGCTCTGCTTGTGATCAGAACATGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
CDS-3UTR TCA 90 bp ACTGACTTCTCACAATGCTGCATTATGAGAAATATGTATCTCGCTTTACACAGATCGGACTTTGACAGCTaGATCTCATTCTCATCTCCT +
Preference number: 4 (lower is better)
Translates to: TDFSQCCIMRNMYLALHRSDFDS*ISFSSP
Trigger: AGGAGATGAGAATGAGATTCAGCTGTCAAAGTCCGA...TCTGTGTAAAGCGAGATACATATTTCTCATAATGCAGCATTGTGAGAAGTCAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000615869.4
CDS-3UTR TCA 90 bp GACTTCTCACAATGCTGCATTATGAGAAATATGTATCTCGCTTTACACAGAAAATACCACGTCGGACTTTaGCAGCTGAATCTCATTCTC +
Preference number: 4 (lower is better)
Translates to: DFSQCCIMRNMYLALHRKYHVGL*QLNLIL
Trigger: GAGAATGAGATTCAGCTGTCAAAGTCCGACGTGGTA...TTTTCTGTGTAAAGCGAGATACATATTTCTCATAATGCAGCATTGTGAGAAGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000615869.4
CDS-3UTR TCA 90 bp ACTGACTTCTCACAATGCTGCATTATGAGAAATATGTATCTCGCTTTACACAGAGCCCTATACATGGCTTaGACCCATAATATTCTGTCC +
Preference number: 4 (lower is better)
Translates to: TDFSQCCIMRNMYLALHRALYMA*THNILS
Trigger: GGACAGAATATTATGGGTTCAAGCCATGTATAGGGC...TCTGTGTAAAGCGAGATACATATTTCTCATAATGCAGCATTGTGAGAAGTCAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000615869.4
CDS-3UTR TCA 90 bp CCATTGGATAATCTAGTCTATATTTGGGTTTGGCAATCCTTTCATCCCAGGAATACTGGTTTATATGATTaGCCTGTGGCCCTATACATG +
Preference number: 4 (lower is better)
Translates to: PLDNLVYIWVWQSFHPRNTGLYD*PVALYM
Trigger: CATGTATAGGGCCACAGGTCAATCATATAAACCAGT...ATTCCTGGGATGAAAGGATTGCCAAACCCAAATATAGACTAGATTATCCAATGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR TCA 90 bp TCATGTTCTGATCACAAGCAGAGCCAAGGTTCATTTTTAGGTCAAACTACACAAACTGGTTTATATGATTaGCCTGTGGCCCTATACATG +
Preference number: 4 (lower is better)
Translates to: SCSDHKQSQGSFLGQTTQTGLYD*PVALYM
Trigger: CATGTATAGGGCCACAGGTCAATCATATAAACCAGT...TTGTGTAGTTTGACCTAAAAATGAACCTTGGCTCTGCTTGTGATCAGAACATGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000615869.4
CDS-3UTR TCA 90 bp TCATGTTCTGATCACAAGCAGAGCCAAGGTTCATTTTTAGGTCAAACTACACAAAGGAACTGGTTTATATaGTTGACCTGTGGCCCTATA +
Preference number: 4 (lower is better)
Translates to: SCSDHKQSQGSFLGQTTQRNWFI*LTCGPI
Trigger: TATAGGGCCACAGGTCAATCATATAAACCAGTTCCT...TTGTGTAGTTTGACCTAAAAATGAACCTTGGCTCTGCTTGTGATCAGAACATGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000615869.4
CDS-3UTR TCA 90 bp GACTTCTCACAATGCTGCATTATGAGAAATATGTATCTCGCTTTACACAGAAAAGAATCATTCAGTCTGTaGTCCAAAGTCTGCCTCTGG +
Preference number: 4 (lower is better)
Translates to: DFSQCCIMRNMYLALHRKESFSL*SKVCLW
Trigger: CCAGAGGCAGACTTTGGATCACAGACTGAATGATTC...TTTTCTGTGTAAAGCGAGATACATATTTCTCATAATGCAGCATTGTGAGAAGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000615869.4
CDS-3UTR TCA 90 bp GGTGCAGTGGTCCGAACTGACTTCTCACAATGCTGCATTATGAGAAATATGTATCTGAAATGGCTTATCTaGTTTTCTAAAAGGGAAGAG +
Preference number: 4 (lower is better)
Translates to: GAVVRTDFSQCCIMRNMYLKWLI*FSKREE
Trigger: CTCTTCCCTTTTAGAAAATCAGATAAGCCATTTCAG...ATACATATTTCTCATAATGCAGCATTGTGAGAAGTCAGTTCGGACCACTGCACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000615869.4
CDS-3UTR TCA 90 bp CCATTGGATAATCTAGTCTATATTTGGGTTTGGCAATCCTTTCATCCCAGGAATTCTCGAGACATTTTCTaGCCACTTTCTTCACCTCTT +
Preference number: 4 (lower is better)
Translates to: PLDNLVYIWVWQSFHPRNSRDIF*PLSSPL
Trigger: AAGAGGTGAAGAAAGTGGTCAGAAAATGTCTCGAGA...ATTCCTGGGATGAAAGGATTGCCAAACCCAAATATAGACTAGATTATCCAATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR TCA 90 bp GACTTCTCACAATGCTGCATTATGAGAAATATGTATCTCGCTTTACACAGAAAATGCTCAAAACCTCTGTaGATTGACTGGGCGATGGAA +
Preference number: 4 (lower is better)
Translates to: DFSQCCIMRNMYLALHRKCSKPL*IDWAME
Trigger: TTCCATCGCCCAGTCAATTCACAGAGGTTTTGAGCA...TTTTCTGTGTAAAGCGAGATACATATTTCTCATAATGCAGCATTGTGAGAAGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR TCA 90 bp CCATTGGATAATCTAGTCTATATTTGGGTTTGGCAATCCTTTCATCCCAGGAATCAGTTCTTGTTCTTTTaGCACAGGCCTCTAGCATAT +
Preference number: 4 (lower is better)
Translates to: PLDNLVYIWVWQSFHPRNQFLFF*HRPLAY
Trigger: ATATGCTAGAGGCCTGTGTCAAAAGAACAAGAACTG...ATTCCTGGGATGAAAGGATTGCCAAACCCAAATATAGACTAGATTATCCAATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR TCA 90 bp CCATTGGATAATCTAGTCTATATTTGGGTTTGGCAATCCTTTCATCCCAGGAATCAGCTGCTTTCACAGTaGATGACAGAATGGATGAAA +
Preference number: 4 (lower is better)
Translates to: PLDNLVYIWVWQSFHPRNQLLSQ*MTEWMK
Trigger: TTTCATCCATTCTGTCATTCACTGTGAAAGCAGCTG...ATTCCTGGGATGAAAGGATTGCCAAACCCAAATATAGACTAGATTATCCAATGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR TCA 90 bp TCATGTTCTGATCACAAGCAGAGCCAAGGTTCATTTTTAGGTCAAACTACACAACAGCTGCTTTCACAGTaGATGACAGAATGGATGAAA +
Preference number: 4 (lower is better)
Translates to: SCSDHKQSQGSFLGQTTQQLLSQ*MTEWMK
Trigger: TTTCATCCATTCTGTCATTCACTGTGAAAGCAGCTG...TTGTGTAGTTTGACCTAAAAATGAACCTTGGCTCTGCTTGTGATCAGAACATGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR TCA 90 bp ACTGACTTCTCACAATGCTGCATTATGAGAAATATGTATCTCGCTTTACACAGATCAACCACACGCAAATaGCTTTCATGGAACTGCTGT +
Preference number: 4 (lower is better)
Translates to: TDFSQCCIMRNMYLALHRSTTRK*LSWNCC
Trigger: ACAGCAGTTCCATGAAAGTCATTTGCGTGTGGTTGA...TCTGTGTAAAGCGAGATACATATTTCTCATAATGCAGCATTGTGAGAAGTCAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR TCA 90 bp TTTTTATTGCCTGCAAGCTGTTATACTGGAGCAGGAGAATATGGTATCTTGACGGATAGTTGGGATGTTTaGAACACTGCAAACCTCTTT +
Preference number: 4 (lower is better)
Translates to: FLLPASCYTGAGEYGILTDSWDV*NTANLF
Trigger: AAAGAGGTTTGCAGTGTTTCAAACATCCCAACTATC...CGTCAAGATACCATATTCTCCTGCTCCAGTATAACAGCTTGCAGGCAATAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR TCA 90 bp CCATTGGATAATCTAGTCTATATTTGGGTTTGGCAATCCTTTCATCCCAGGAATCTAGGGCCCAGAAAATaGGCCAAAACAATGCTAAAT +
Preference number: 4 (lower is better)
Translates to: PLDNLVYIWVWQSFHPRNLGPRK*AKTMLN
Trigger: ATTTAGCATTGTTTTGGCTCATTTTCTGGGCCCTAG...ATTCCTGGGATGAAAGGATTGCCAAACCCAAATATAGACTAGATTATCCAATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR GCA 90 bp GAAGGAAGAAATTTCCTTGTTTGTTATCTTAGCCCTAGGGCCCAGAAAATGAGCCGTTCTTTCAGTAACTaGAACTGTTGTTTGTTAAGC +
Preference number: 4 (lower is better)
Translates to: EGRNFLVCYLSPRAQKMSRSFSN*NCCLLS
Trigger: GCTTAACAAACAACAGTTGCAGTTACTGAAAGAACG...GCTCATTTTCTGGGCCCTAGGGCTAAGATAACAAACAAGGAAATTTCTTCCTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR GCA 90 bp GGTGCAGTGGTCCGAACTGACTTCTCACAATGCTGCATTATGAGAAATATGTATCGTTCTTTCAGTAACTaGAACTGTTGTTTGTTAAGC +
Preference number: 4 (lower is better)
Translates to: GAVVRTDFSQCCIMRNMYRSFSN*NCCLLS
Trigger: GCTTAACAAACAACAGTTGCAGTTACTGAAAGAACG...ATACATATTTCTCATAATGCAGCATTGTGAGAAGTCAGTTCGGACCACTGCACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000615869.4
CDS-3UTR GCA 90 bp GACTTCTCACAATGCTGCATTATGAGAAATATGTATCTCGCTTTACACAGAAAACCTTCTGATCTGGGCTaGTTGTTCATCTGCGTTATC +
Preference number: 4 (lower is better)
Translates to: DFSQCCIMRNMYLALHRKPSDLG*LFICVI
Trigger: GATAACGCAGATGAACAAGCAGCCCAGATCAGAAGG...TTTTCTGTGTAAAGCGAGATACATATTTCTCATAATGCAGCATTGTGAGAAGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000615869.4
CDS-3UTR GCA 90 bp ACTGACTTCTCACAATGCTGCATTATGAGAAATATGTATCTCGCTTTACACAGAATTTTATCTGCCAATTaGAGCCGGCCATCAAGTTCC +
Preference number: 4 (lower is better)
Translates to: TDFSQCCIMRNMYLALHRILSAN*SRPSSS
Trigger: GGAACTTGATGGCCGGCTGCAATTGGCAGATAAAAT...TCTGTGTAAAGCGAGATACATATTTCTCATAATGCAGCATTGTGAGAAGTCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000615869.4
CDS-3UTR GCA 90 bp ATTTTTATTGCCTGCAAGCTGTTATACTGGAGCAGGAGAATATGGTATCTTGACACTGACTTCAGGCCTTaGACTTCCATTATGACAATC +
Preference number: 4 (lower is better)
Translates to: IFIACKLLYWSRRIWYLDTDFRP*TSIMTI
Trigger: GATTGTCATAATGGAAGTGCAAGGCCTGAAGTCAGT...GTCAAGATACCATATTCTCCTGCTCCAGTATAACAGCTTGCAGGCAATAAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR GCA 90 bp ACTGACTTCTCACAATGCTGCATTATGAGAAATATGTATCTCGCTTTACACAGAAGAAAGCTGAGCATCTaGATGGAGAGTTCCTCCTTT +
Preference number: 4 (lower is better)
Translates to: TDFSQCCIMRNMYLALHRRKLSI*MESSSF
Trigger: AAAGGAGGAACTCTCCATGCAGATGCTCAGCTTTCT...TCTGTGTAAAGCGAGATACATATTTCTCATAATGCAGCATTGTGAGAAGTCAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR GCA 90 bp TCATGTTCTGATCACAAGCAGAGCCAAGGTTCATTTTTAGGTCAAACTACACAAATGTTCCATCAGTTCTaGAAGGTAGCAGAGATGTCT +
Preference number: 4 (lower is better)
Translates to: SCSDHKQSQGSFLGQTTQMFHQF*KVAEMS
Trigger: AGACATCTCTGCTACCTTGCAGAACTGATGGAACAT...TTGTGTAGTTTGACCTAAAAATGAACCTTGGCTCTGCTTGTGATCAGAACATGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000615869.4
CDS-3UTR GCA 90 bp TCATGTTCTGATCACAAGCAGAGCCAAGGTTCATTTTTAGGTCAAACTACACAAATATTCTTGACAGGCTaGCATGTCTCCTGCTCAAAA +
Preference number: 4 (lower is better)
Translates to: SCSDHKQSQGSFLGQTTQIFLTG*HVSCSK
Trigger: TTTTGAGCAGGAGACATGGCAGCCTGTCAAGAATAT...TTGTGTAGTTTGACCTAAAAATGAACCTTGGCTCTGCTTGTGATCAGAACATGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR GCA 90 bp ATTTTTATTGCCTGCAAGCTGTTATACTGGAGCAGGAGAATATGGTATCTTGACATATTCTTGACAGGCTaGCATGTCTCCTGCTCAAAA +
Preference number: 4 (lower is better)
Translates to: IFIACKLLYWSRRIWYLDIFLTG*HVSCSK
Trigger: TTTTGAGCAGGAGACATGGCAGCCTGTCAAGAATAT...GTCAAGATACCATATTCTCCTGCTCCAGTATAACAGCTTGCAGGCAATAAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR GCA 90 bp GAAGGAAGAAATTTCCTTGTTTGTTATCTTAGCCCTAGGGCCCAGAAAATGAGCTCAAAGACAAACATTTaGAGTGCATCAAGCTTCCAA +
Preference number: 4 (lower is better)
Translates to: EGRNFLVCYLSPRAQKMSSKTNI*SASSFQ
Trigger: TTGGAAGCTTGATGCACTGCAAATGTTTGTCTTTGA...GCTCATTTTCTGGGCCCTAGGGCTAAGATAACAAACAAGGAAATTTCTTCCTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR GCA 90 bp GTTGGTGCAGTGGTCCGAACTGACTTCTCACAATGCTGCATTATGAGAAATATGATTAGTTTAAGTCTTTaGTCTAAGTGGTGGGCAAAT +
Preference number: 4 (lower is better)
Translates to: VGAVVRTDFSQCCIMRNMISLSL*SKWWAN
Trigger: ATTTGCCCACCACTTAGAGCAAAGACTTAAACTAAT...CATATTTCTCATAATGCAGCATTGTGAGAAGTCAGTTCGGACCACTGCACCAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR GCA 90 bp ACTGACTTCTCACAATGCTGCATTATGAGAAATATGTATCTCGCTTTACACAGAAAACGGAAGCTGGAATaGGCAAGTCAGTTGTTTTGC +
Preference number: 4 (lower is better)
Translates to: TDFSQCCIMRNMYLALHRKRKLE*ASQLFC
Trigger: GCAAAACAACTGACTTGCGCATTCCAGCTTCCGTTT...TCTGTGTAAAGCGAGATACATATTTCTCATAATGCAGCATTGTGAGAAGTCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR GCA 90 bp TTTTTATTGCCTGCAAGCTGTTATACTGGAGCAGGAGAATATGGTATCTTGACGCAGAGTTTGGTGCTTTaGTTTTTGGCATCGACTAAT +
Preference number: 4 (lower is better)
Translates to: FLLPASCYTGAGEYGILTQSLVL*FLASTN
Trigger: ATTAGTCGATGCCAAAAAGCAAAGCACCAAACTCTG...CGTCAAGATACCATATTCTCCTGCTCCAGTATAACAGCTTGCAGGCAATAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR GCA 90 bp GAAGGAAGAAATTTCCTTGTTTGTTATCTTAGCCCTAGGGCCCAGAAAATGAGCTGGATGAAAAGAAAGTaGCTTCATCATACCTTGACA +
Preference number: 4 (lower is better)
Translates to: EGRNFLVCYLSPRAQKMSWMKRK*LHHTLT
Trigger: TGTCAAGGTATGATGAAGGCACTTTCTTTTCATCCA...GCTCATTTTCTGGGCCCTAGGGCTAAGATAACAAACAAGGAAATTTCTTCCTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR GCA 90 bp TTTTTATTGCCTGCAAGCTGTTATACTGGAGCAGGAGAATATGGTATCTTGACGCATAATATAGGTGTCTaGCAGATCCATTCCTGGTTT +
Preference number: 4 (lower is better)
Translates to: FLLPASCYTGAGEYGILTHNIGV*QIHSWF
Trigger: AAACCAGGAATGGATCTGGCAGACACCTATATTATG...CGTCAAGATACCATATTCTCCTGCTCCAGTATAACAGCTTGCAGGCAATAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR GCA 90 bp TGCCATTGGAGAGTTTGGGATAGCATGACTGGACATTTGAGGGTTTGGAGAAAAACTGACTTCTCACAATaGTGCATTATGAGAAATATG +
Preference number: 4 (lower is better)
Translates to: CHWRVWDSMTGHLRVWRKTDFSQ*CIMRNM
Trigger: CATATTTCTCATAATGCAGCATTGTGAGAAGTCAGT...TTTTCTCCAAACCCTCAAATGTCCAGTCATGCTATCCCAAACTCTCCAATGGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR GCA 90 bp TGCCATTGGAGAGTTTGGGATAGCATGACTGGACATTTGAGGGTTTGGAGAAAAAAACGTTTTCATAAATaGAGGGATACCTCCACTTAT +
Preference number: 4 (lower is better)
Translates to: CHWRVWDSMTGHLRVWRKKRFHK*RDTSTY
Trigger: ATAAGTGGAGGTATCCCTGCATTTATGAAAACGTTT...TTTTCTCCAAACCCTCAAATGTCCAGTCATGCTATCCCAAACTCTCCAATGGCA
40% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CCA 90 bp TTGGATAATCTAGTCTATATTTGGGTTTGGCAATCCTTTCATCCCAGGAATATACCATTGAGGAAGGCCTaGAACCGTTCTTTCAGTAAC +
Preference number: 4 (lower is better)
Translates to: LDNLVYIWVWQSFHPRNIPLRKA*NRSFSN
Trigger: GTTACTGAAAGAACGGTTCCAGGCCTTCCTCAATGG...TATATTCCTGGGATGAAAGGATTGCCAAACCCAAATATAGACTAGATTATCCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CCA 90 bp TTTTTATTGCCTGCAAGCTGTTATACTGGAGCAGGAGAATATGGTATCTTGACGCTTCACCTCTGTAAATaGCATCATATTTGGCTATCC +
Preference number: 4 (lower is better)
Translates to: FLLPASCYTGAGEYGILTLHLCK*HHIWLS
Trigger: GGATAGCCAAATATGATGCCATTTACAGAGGTGAAG...CGTCAAGATACCATATTCTCCTGCTCCAGTATAACAGCTTGCAGGCAATAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CCA 90 bp AGATTTTTATTGCCTGCAAGCTGTTATACTGGAGCAGGAGAATATGGTATCTTGACCACCTTTCGAAACTaGAAGACTTTCCAAATTGGC +
Preference number: 4 (lower is better)
Translates to: RFLLPASCYTGAGEYGILTTFRN*KTFQIG
Trigger: GCCAATTTGGAAAGTCTTCCAGTTTCGAAAGGTGGT...CAAGATACCATATTCTCCTGCTCCAGTATAACAGCTTGCAGGCAATAAAAATCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CCA 90 bp AGATTTTTATTGCCTGCAAGCTGTTATACTGGAGCAGGAGAATATGGTATCTTGAGTAAACAATTCGATTaGGAGCAACTGACTTCAGGC +
Preference number: 4 (lower is better)
Translates to: RFLLPASCYTGAGEYGILSKQFD*EQLTSG
Trigger: GCCTGAAGTCAGTTGCTCCCAATCGAATTGTTTACT...CAAGATACCATATTCTCCTGCTCCAGTATAACAGCTTGCAGGCAATAAAAATCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CCA 90 bp ATTTTTATTGCCTGCAAGCTGTTATACTGGAGCAGGAGAATATGGTATCTTGACAGTAAACAATTCGATTaGGAGCAACTGACTTCAGGC +
Preference number: 4 (lower is better)
Translates to: IFIACKLLYWSRRIWYLDSKQFD*EQLTSG
Trigger: GCCTGAAGTCAGTTGCTCCCAATCGAATTGTTTACT...GTCAAGATACCATATTCTCCTGCTCCAGTATAACAGCTTGCAGGCAATAAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CCA 90 bp TTTTTATTGCCTGCAAGCTGTTATACTGGAGCAGGAGAATATGGTATCTTGACGCCTGTTCATCATCACTaGCAAAGATTACAGTATCTC +
Preference number: 4 (lower is better)
Translates to: FLLPASCYTGAGEYGILTPVHHH*QRLQYL
Trigger: GAGATACTGTAATCTTTGCCAGTGATGATGAACAGG...CGTCAAGATACCATATTCTCCTGCTCCAGTATAACAGCTTGCAGGCAATAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CCA 90 bp GACTTCTCACAATGCTGCATTATGAGAAATATGTATCTCGCTTTACACAGAAAATCTAACACAAAGACTTaGCCAGGGCTAAACCATCCC +
Preference number: 4 (lower is better)
Translates to: DFSQCCIMRNMYLALHRKSNTKT*PGLNHP
Trigger: GGGATGGTTTAGCCCTGGCCAAGTCTTTGTGTTAGA...TTTTCTGTGTAAAGCGAGATACATATTTCTCATAATGCAGCATTGTGAGAAGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CCA 90 bp GGTGCAGTGGTCCGAACTGACTTCTCACAATGCTGCATTATGAGAAATATGTATCTGCTGGTATGGGAGTaGCAATATCTTTCATTAAAA +
Preference number: 4 (lower is better)
Translates to: GAVVRTDFSQCCIMRNMYLLVWE*QYLSLK
Trigger: TTTTAATGAAAGATATTGCCACTCCCATACCAGCAG...ATACATATTTCTCATAATGCAGCATTGTGAGAAGTCAGTTCGGACCACTGCACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CCA 90 bp GAAGGAAGAAATTTCCTTGTTTGTTATCTTAGCCCTAGGGCCCAGAAAATGAGCAATGTTAGGAATCTGTaGAAGATTAAGAGGCAGACT +
Preference number: 4 (lower is better)
Translates to: EGRNFLVCYLSPRAQKMSNVRNL*KIKRQT
Trigger: AGTCTGCCTCTTAATCTTCCACAGATTCCTAACATT...GCTCATTTTCTGGGCCCTAGGGCTAAGATAACAAACAAGGAAATTTCTTCCTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CCA 90 bp ATTTTTATTGCCTGCAAGCTGTTATACTGGAGCAGGAGAATATGGTATCTTGACTTGCTGAGCCATTGGTaGACTCATATAAAGAAGGCA +
Preference number: 4 (lower is better)
Translates to: IFIACKLLYWSRRIWYLDLLSHW*THIKKA
Trigger: TGCCTTCTTTATATGAGTCCACCAATGGCTCAGCAA...GTCAAGATACCATATTCTCCTGCTCCAGTATAACAGCTTGCAGGCAATAAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR CCA 90 bp GACTTCTCACAATGCTGCATTATGAGAAATATGTATCTCGCTTTACACAGAAAAGGCAAATTCCTGTTCTaGCCAGTGCAGATCAAAGAC +
Preference number: 4 (lower is better)
Translates to: DFSQCCIMRNMYLALHRKGKFLF*PVQIKD
Trigger: GTCTTTGATCTGCACTGGCCAGAACAGGAATTTGCC...TTTTCTGTGTAAAGCGAGATACATATTTCTCATAATGCAGCATTGTGAGAAGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR CCA 90 bp GACTTCTCACAATGCTGCATTATGAGAAATATGTATCTCGCTTTACACAGAAAACTTTGCTCTAAGTGGTaGGCAAATTCCTGTTCTGGC +
Preference number: 4 (lower is better)
Translates to: DFSQCCIMRNMYLALHRKLCSKW*ANSCSG
Trigger: GCCAGAACAGGAATTTGCCCACCACTTAGAGCAAAG...TTTTCTGTGTAAAGCGAGATACATATTTCTCATAATGCAGCATTGTGAGAAGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR CCA 90 bp TTGGATAATCTAGTCTATATTTGGGTTTGGCAATCCTTTCATCCCAGGAATATACTTTGCTCTAAGTGGTaGGCAAATTCCTGTTCTGGC +
Preference number: 4 (lower is better)
Translates to: LDNLVYIWVWQSFHPRNILCSKW*ANSCSG
Trigger: GCCAGAACAGGAATTTGCCCACCACTTAGAGCAAAG...TATATTCCTGGGATGAAAGGATTGCCAAACCCAAATATAGACTAGATTATCCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR CCA 90 bp TCATGTTCTGATCACAAGCAGAGCCAAGGTTCATTTTTAGGTCAAACTACACAAAGTCTTTGCTCTAAGTaGTGGGCAAATTCCTGTTCT +
Preference number: 4 (lower is better)
Translates to: SCSDHKQSQGSFLGQTTQSLCSK*WANSCS
Trigger: AGAACAGGAATTTGCCCACCACTTAGAGCAAAGACT...TTGTGTAGTTTGACCTAAAAATGAACCTTGGCTCTGCTTGTGATCAGAACATGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR CCA 90 bp TGCCATTGGAGAGTTTGGGATAGCATGACTGGACATTTGAGGGTTTGGAGAAAATCTCGAAGAATATCTTaGTTTTGCCGAACAAACATA +
Preference number: 4 (lower is better)
Translates to: CHWRVWDSMTGHLRVWRKSRRIS*FCRTNI
Trigger: TATGTTTGTTCGGCAAAACCAAGATATTCTTCGAGA...TTTTCTCCAAACCCTCAAATGTCCAGTCATGCTATCCCAAACTCTCCAATGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CCA 90 bp AGATTTTTATTGCCTGCAAGCTGTTATACTGGAGCAGGAGAATATGGTATCTTGGTCTATATTTGGGTTTaGCAATCCTTTCATCCCAGG +
Preference number: 4 (lower is better)
Translates to: RFLLPASCYTGAGEYGILVYIWV*QSFHPR
Trigger: CCTGGGATGAAAGGATTGCCAAACCCAAATATAGAC...CAAGATACCATATTCTCCTGCTCCAGTATAACAGCTTGCAGGCAATAAAAATCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR CCA 90 bp AGATTTTTATTGCCTGCAAGCTGTTATACTGGAGCAGGAGAATATGGTATCTTGTTGCTACCCCACACCTaGGGATTACTTATAGTTGAA +
Preference number: 4 (lower is better)
Translates to: RFLLPASCYTGAGEYGILLLPHT*GLLIVE
Trigger: TTCAACTATAAGTAATCCCCAGGTGTGGGGTAGCAA...CAAGATACCATATTCTCCTGCTCCAGTATAACAGCTTGCAGGCAATAAAAATCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR CCA 90 bp ACTGACTTCTCACAATGCTGCATTATGAGAAATATGTATCTCGCTTTACACAGATGGAGCAGGAGAATATaGTATCTTGACGGAAGCACA +
Preference number: 4 (lower is better)
Translates to: TDFSQCCIMRNMYLALHRWSRRI*YLDGST
Trigger: TGTGCTTCCGTCAAGATACCATATTCTCCTGCTCCA...TCTGTGTAAAGCGAGATACATATTTCTCATAATGCAGCATTGTGAGAAGTCAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR CCA 90 bp ACTGACTTCTCACAATGCTGCATTATGAGAAATATGTATCTCGCTTTACACAGACCACTTATTACACCATaGGAGAACGAATCTGGAGGT +
Preference number: 4 (lower is better)
Translates to: TDFSQCCIMRNMYLALHRPLITP*ENESGG
Trigger: ACCTCCAGATTCGTTCTCCCATGGTGTAATAAGTGG...TCTGTGTAAAGCGAGATACATATTTCTCATAATGCAGCATTGTGAGAAGTCAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CCA 90 bp TCATGTTCTGATCACAAGCAGAGCCAAGGTTCATTTTTAGGTCAAACTACACAAGAGATGCCTGGTTCATaGTCTCTTCTATTTTGGCAT +
Preference number: 4 (lower is better)
Translates to: SCSDHKQSQGSFLGQTTQEMPGS*SLLFWH
Trigger: ATGCCAAAATAGAAGAGACCATGAACCAGGCATCTC...TTGTGTAGTTTGACCTAAAAATGAACCTTGGCTCTGCTTGTGATCAGAACATGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
CDS-3UTR CCA 90 bp CCATTGGATAATCTAGTCTATATTTGGGTTTGGCAATCCTTTCATCCCAGGAATGAGATGCCTGGTTCATaGTCTCTTCTATTTTGGCAT +
Preference number: 4 (lower is better)
Translates to: PLDNLVYIWVWQSFHPRNEMPGS*SLLFWH
Trigger: ATGCCAAAATAGAAGAGACCATGAACCAGGCATCTC...ATTCCTGGGATGAAAGGATTGCCAAACCCAAATATAGACTAGATTATCCAATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334010.11
ENST00000449022.7
CDS-3UTR TCA 90 bp ACTGACTTCTCACAATGCTGCATTATGAGAAATATGTATCTCGCTTTACACAGAAGGAACTGGTTTATATaGTTGACCTGTGGCCCTATA +
Preference number: 4 (lower is better)
Translates to: TDFSQCCIMRNMYLALHRRNWFI*LTCGPI
Trigger: TATAGGGCCACAGGTCAATCATATAAACCAGTTCCT...TCTGTGTAAAGCGAGATACATATTTCTCATAATGCAGCATTGTGAGAAGTCAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000615869.4
CDS-3UTR TCA 90 bp TTGGATAATCTAGTCTATATTTGGGTTTGGCAATCCTTTCATCCCAGGAATATACTAAAAAGGAAGGCATaGTCAAGCTTGCAGGGGTTT +
Preference number: 4 (lower is better)
Translates to: LDNLVYIWVWQSFHPRNILKRKA*SSLQGF
Trigger: AAACCCCTGCAAGCTTGATCATGCCTTCCTTTTTAG...TATATTCCTGGGATGAAAGGATTGCCAAACCCAAATATAGACTAGATTATCCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR TCA 90 bp GACTTCTCACAATGCTGCATTATGAGAAATATGTATCTCGCTTTACACAGAAAAGACAGCACCATTTTCTaGATGTTCCATCAGTTCTGC +
Preference number: 4 (lower is better)
Translates to: DFSQCCIMRNMYLALHRKDSTIF*MFHQFC
Trigger: GCAGAACTGATGGAACATTCAGAAAATGGTGCTGTC...TTTTCTGTGTAAAGCGAGATACATATTTCTCATAATGCAGCATTGTGAGAAGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000615869.4
CDS-3UTR TCA 90 bp CCATTGGATAATCTAGTCTATATTTGGGTTTGGCAATCCTTTCATCCCAGGAATTTCTTTTTCTTCCACTaGAACAGTCCCAATTCCATC +
Preference number: 4 (lower is better)
Translates to: PLDNLVYIWVWQSFHPRNFFFFH*NSPNSI
Trigger: GATGGAATTGGGACTGTTTCAGTGGAAGAAAAAGAA...ATTCCTGGGATGAAAGGATTGCCAAACCCAAATATAGACTAGATTATCCAATGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR TCA 90 bp ACTGACTTCTCACAATGCTGCATTATGAGAAATATGTATCTCGCTTTACACAGATCTCGAGACATTTTCTaGCCACTTTCTTCACCTCTT +
Preference number: 4 (lower is better)
Translates to: TDFSQCCIMRNMYLALHRSRDIF*PLSSPL
Trigger: AAGAGGTGAAGAAAGTGGTCAGAAAATGTCTCGAGA...TCTGTGTAAAGCGAGATACATATTTCTCATAATGCAGCATTGTGAGAAGTCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000615869.4
CDS-3UTR TCA 90 bp AGATTTTTATTGCCTGCAAGCTGTTATACTGGAGCAGGAGAATATGGTATCTTGTTGCCTTTTGTAGCTTaGGTTCAAATGCAGTTCTTG +
Preference number: 4 (lower is better)
Translates to: RFLLPASCYTGAGEYGILLPFVA*VQMQFL
Trigger: CAAGAACTGCATTTGAACTCAAGCTACAAAAGGCAA...CAAGATACCATATTCTCCTGCTCCAGTATAACAGCTTGCAGGCAATAAAAATCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR TCA 90 bp TTTTTATTGCCTGCAAGCTGTTATACTGGAGCAGGAGAATATGGTATCTTGACGCAGATCATCTATTTTTaGATGGTACTGTTGCTCTTG +
Preference number: 4 (lower is better)
Translates to: FLLPASCYTGAGEYGILTQIIYF*MVLLLL
Trigger: CAAGAGCAACAGTACCATTCAAAAATAGATGATCTG...CGTCAAGATACCATATTCTCCTGCTCCAGTATAACAGCTTGCAGGCAATAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR TCA 90 bp TTGGATAATCTAGTCTATATTTGGGTTTGGCAATCCTTTCATCCCAGGAATATATCAACCACACGCAAATaGCTTTCATGGAACTGCTGT +
Preference number: 4 (lower is better)
Translates to: LDNLVYIWVWQSFHPRNISTTRK*LSWNCC
Trigger: ACAGCAGTTCCATGAAAGTCATTTGCGTGTGGTTGA...TATATTCCTGGGATGAAAGGATTGCCAAACCCAAATATAGACTAGATTATCCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR TCA 90 bp GACTTCTCACAATGCTGCATTATGAGAAATATGTATCTCGCTTTACACAGAAAATCAACCACACGCAAATaGCTTTCATGGAACTGCTGT +
Preference number: 4 (lower is better)
Translates to: DFSQCCIMRNMYLALHRKSTTRK*LSWNCC
Trigger: ACAGCAGTTCCATGAAAGTCATTTGCGTGTGGTTGA...TTTTCTGTGTAAAGCGAGATACATATTTCTCATAATGCAGCATTGTGAGAAGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR TCA 90 bp TTGGATAATCTAGTCTATATTTGGGTTTGGCAATCCTTTCATCCCAGGAATATATTCATAGTAATGCCCTaGAGTCCTCCTCCTTCTGAA +
Preference number: 4 (lower is better)
Translates to: LDNLVYIWVWQSFHPRNIFIVMP*SPPPSE
Trigger: TTCAGAAGGAGGAGGACTTCAGGGCATTACTATGAA...TATATTCCTGGGATGAAAGGATTGCCAAACCCAAATATAGACTAGATTATCCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR TCA 90 bp TTGGATAATCTAGTCTATATTTGGGTTTGGCAATCCTTTCATCCCAGGAATATAGAGAATATGGTATCTTaGCGGAAGCACACTTGCTAC +
Preference number: 4 (lower is better)
Translates to: LDNLVYIWVWQSFHPRNIENMVS*RKHTCY
Trigger: GTAGCAAGTGTGCTTCCGTCAAGATACCATATTCTC...TATATTCCTGGGATGAAAGGATTGCCAAACCCAAATATAGACTAGATTATCCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR TCA 90 bp GACTTCTCACAATGCTGCATTATGAGAAATATGTATCTCGCTTTACACAGAAAAGAGAATATGGTATCTTaGCGGAAGCACACTTGCTAC +
Preference number: 4 (lower is better)
Translates to: DFSQCCIMRNMYLALHRKENMVS*RKHTCY
Trigger: GTAGCAAGTGTGCTTCCGTCAAGATACCATATTCTC...TTTTCTGTGTAAAGCGAGATACATATTTCTCATAATGCAGCATTGTGAGAAGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR TCA 90 bp TCATGTTCTGATCACAAGCAGAGCCAAGGTTCATTTTTAGGTCAAACTACACAAGATAGTTGGGATGTTTaGAACACTGCAAACCTCTTT +
Preference number: 4 (lower is better)
Translates to: SCSDHKQSQGSFLGQTTQDSWDV*NTANLF
Trigger: AAAGAGGTTTGCAGTGTTTCAAACATCCCAACTATC...TTGTGTAGTTTGACCTAAAAATGAACCTTGGCTCTGCTTGTGATCAGAACATGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR TCA 90 bp CCATTGGATAATCTAGTCTATATTTGGGTTTGGCAATCCTTTCATCCCAGGAATTCCATACCATGTTTCTaGAAACGATCTGCATCTGTA +
Preference number: 4 (lower is better)
Translates to: PLDNLVYIWVWQSFHPRNSIPCF*KRSASV
Trigger: TACAGATGCAGATCGTTTTCAGAAACATGGTATGGA...ATTCCTGGGATGAAAGGATTGCCAAACCCAAATATAGACTAGATTATCCAATGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334010.11
ENST00000615869.4
CDS-3UTR GCA 90 bp CCATTGGATAATCTAGTCTATATTTGGGTTTGGCAATCCTTTCATCCCAGGAATAACTGCGTTGCAAAATaGTTCGTCAGCTACAATTTG +
Preference number: 4 (lower is better)
Translates to: PLDNLVYIWVWQSFHPRNNCVAK*FVSYNL
Trigger: CAAATTGTAGCTGACGAAGCATTTTGCAACGCAGTT...ATTCCTGGGATGAAAGGATTGCCAAACCCAAATATAGACTAGATTATCCAATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR GCA 90 bp ACTGACTTCTCACAATGCTGCATTATGAGAAATATGTATCTCGCTTTACACAGAACTGACTTCAGGCCTTaGACTTCCATTATGACAATC +
Preference number: 4 (lower is better)
Translates to: TDFSQCCIMRNMYLALHRTDFRP*TSIMTI
Trigger: GATTGTCATAATGGAAGTGCAAGGCCTGAAGTCAGT...TCTGTGTAAAGCGAGATACATATTTCTCATAATGCAGCATTGTGAGAAGTCAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000615869.4
CDS-3UTR GCA 90 bp CCATTGGATAATCTAGTCTATATTTGGGTTTGGCAATCCTTTCATCCCAGGAATACTATGCTTCATATGTaGTGGTTTATCCATTCGCAC +
Preference number: 4 (lower is better)
Translates to: PLDNLVYIWVWQSFHPRNTMLHM*WFIHSH
Trigger: GTGCGAATGGATAAACCAGCACATATGAAGCATAGT...ATTCCTGGGATGAAAGGATTGCCAAACCCAAATATAGACTAGATTATCCAATGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR GCA 90 bp AGATTTTTATTGCCTGCAAGCTGTTATACTGGAGCAGGAGAATATGGTATCTTGACTATGCTTCATATGTaGTGGTTTATCCATTCGCAC +
Preference number: 4 (lower is better)
Translates to: RFLLPASCYTGAGEYGILTMLHM*WFIHSH
Trigger: GTGCGAATGGATAAACCAGCACATATGAAGCATAGT...CAAGATACCATATTCTCCTGCTCCAGTATAACAGCTTGCAGGCAATAAAAATCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR GCA 90 bp GGTGCAGTGGTCCGAACTGACTTCTCACAATGCTGCATTATGAGAAATATGTATTACAGATATCCACTATaGTTCATATGTGCTGGTTTA +
Preference number: 4 (lower is better)
Translates to: GAVVRTDFSQCCIMRNMYYRYPL*FICAGL
Trigger: TAAACCAGCACATATGAAGCATAGTGGATATCTGTA...ATACATATTTCTCATAATGCAGCATTGTGAGAAGTCAGTTCGGACCACTGCACC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000615869.4
CDS-3UTR GCA 90 bp AGATTTTTATTGCCTGCAAGCTGTTATACTGGAGCAGGAGAATATGGTATCTTGAAGCTTGCAGGGGTTTaGAGAAATAAACTCATCCAT +
Preference number: 4 (lower is better)
Translates to: RFLLPASCYTGAGEYGILKLAGV*RNKLIH
Trigger: ATGGATGAGTTTATTTCTGCAAACCCCTGCAAGCTT...CAAGATACCATATTCTCCTGCTCCAGTATAACAGCTTGCAGGCAATAAAAATCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR GCA 90 bp GACTTCTCACAATGCTGCATTATGAGAAATATGTATCTCGCTTTACACAGAAAATTTCTTCACCTCTTCTaGTGGTATGGGAGTGGCAAT +
Preference number: 4 (lower is better)
Translates to: DFSQCCIMRNMYLALHRKFLHLF*WYGSGN
Trigger: ATTGCCACTCCCATACCAGCAGAAGAGGTGAAGAAA...TTTTCTGTGTAAAGCGAGATACATATTTCTCATAATGCAGCATTGTGAGAAGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000615869.4
CDS-3UTR GCA 90 bp ACTGACTTCTCACAATGCTGCATTATGAGAAATATGTATCTCGCTTTACACAGATTCTATGCAGAGCTCTaGCAGATGAAGAATCTCTTC +
Preference number: 4 (lower is better)
Translates to: TDFSQCCIMRNMYLALHRFYAEL*QMKNLF
Trigger: GAAGAGATTCTTCATCTGGCAGAGCTCTGCATAGAA...TCTGTGTAAAGCGAGATACATATTTCTCATAATGCAGCATTGTGAGAAGTCAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR GCA 90 bp TTGGATAATCTAGTCTATATTTGGGTTTGGCAATCCTTTCATCCCAGGAATATAGCTGTAAGACTTCTATaGAGAGCTCTGCCAGATGAA +
Preference number: 4 (lower is better)
Translates to: LDNLVYIWVWQSFHPRNIAVRLL*RALPDE
Trigger: TTCATCTGGCAGAGCTCTGCATAGAAGTCTTACAGC...TATATTCCTGGGATGAAAGGATTGCCAAACCCAAATATAGACTAGATTATCCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR GCA 90 bp GGTGCAGTGGTCCGAACTGACTTCTCACAATGCTGCATTATGAGAAATATGTATATTAGTTTAAGTCTTTaGTCTAAGTGGTGGGCAAAT +
Preference number: 4 (lower is better)
Translates to: GAVVRTDFSQCCIMRNMYISLSL*SKWWAN
Trigger: ATTTGCCCACCACTTAGAGCAAAGACTTAAACTAAT...ATACATATTTCTCATAATGCAGCATTGTGAGAAGTCAGTTCGGACCACTGCACC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR GCA 90 bp CCATTGGATAATCTAGTCTATATTTGGGTTTGGCAATCCTTTCATCCCAGGAATCAGAGTTTGGTGCTTTaGTTTTTGGCATCGACTAAT +
Preference number: 4 (lower is better)
Translates to: PLDNLVYIWVWQSFHPRNQSLVL*FLASTN
Trigger: ATTAGTCGATGCCAAAAAGCAAAGCACCAAACTCTG...ATTCCTGGGATGAAAGGATTGCCAAACCCAAATATAGACTAGATTATCCAATGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR GCA 90 bp GGTGCAGTGGTCCGAACTGACTTCTCACAATGCTGCATTATGAGAAATATGTATACTGACTTCTCACAATaGTGCATTATGAGAAATATG +
Preference number: 4 (lower is better)
Translates to: GAVVRTDFSQCCIMRNMYTDFSQ*CIMRNM
Trigger: CATATTTCTCATAATGCAGCATTGTGAGAAGTCAGT...ATACATATTTCTCATAATGCAGCATTGTGAGAAGTCAGTTCGGACCACTGCACC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR GCA 90 bp GGTGCAGTGGTCCGAACTGACTTCTCACAATGCTGCATTATGAGAAATATGTATAAACGTTTTCATAAATaGAGGGATACCTCCACTTAT +
Preference number: 4 (lower is better)
Translates to: GAVVRTDFSQCCIMRNMYKRFHK*RDTSTY
Trigger: ATAAGTGGAGGTATCCCTGCATTTATGAAAACGTTT...ATACATATTTCTCATAATGCAGCATTGTGAGAAGTCAGTTCGGACCACTGCACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CCA 90 bp AGATTTTTATTGCCTGCAAGCTGTTATACTGGAGCAGGAGAATATGGTATCTTGCTTCACCTCTGTAAATaGCATCATATTTGGCTATCC +
Preference number: 4 (lower is better)
Translates to: RFLLPASCYTGAGEYGILLHLCK*HHIWLS
Trigger: GGATAGCCAAATATGATGCCATTTACAGAGGTGAAG...CAAGATACCATATTCTCCTGCTCCAGTATAACAGCTTGCAGGCAATAAAAATCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CCA 90 bp ACTGACTTCTCACAATGCTGCATTATGAGAAATATGTATCTCGCTTTACACAGAAGTAAACAATTCGATTaGGAGCAACTGACTTCAGGC +
Preference number: 4 (lower is better)
Translates to: TDFSQCCIMRNMYLALHRSKQFD*EQLTSG
Trigger: GCCTGAAGTCAGTTGCTCCCAATCGAATTGTTTACT...TCTGTGTAAAGCGAGATACATATTTCTCATAATGCAGCATTGTGAGAAGTCAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CCA 90 bp ACTGACTTCTCACAATGCTGCATTATGAGAAATATGTATCTCGCTTTACACAGACTGTGGCCCTATACATaGCTTGAACCCATAATATTC +
Preference number: 4 (lower is better)
Translates to: TDFSQCCIMRNMYLALHRLWPYT*LEPIIF
Trigger: GAATATTATGGGTTCAAGCCATGTATAGGGCCACAG...TCTGTGTAAAGCGAGATACATATTTCTCATAATGCAGCATTGTGAGAAGTCAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CCA 90 bp TCATGTTCTGATCACAAGCAGAGCCAAGGTTCATTTTTAGGTCAAACTACACAATCCAAAGTCTGCCTCTaGAGTATTCTAAAAAGGAAG +
Preference number: 4 (lower is better)
Translates to: SCSDHKQSQGSFLGQTTQSKVCL*SILKRK
Trigger: CTTCCTTTTTAGAATACTCCAGAGGCAGACTTTGGA...TTGTGTAGTTTGACCTAAAAATGAACCTTGGCTCTGCTTGTGATCAGAACATGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CCA 90 bp TTGGATAATCTAGTCTATATTTGGGTTTGGCAATCCTTTCATCCCAGGAATATACCTCTTCTGCTGGTATaGGAGTGGCAATATCTTTCA +
Preference number: 4 (lower is better)
Translates to: LDNLVYIWVWQSFHPRNIPLLLV*EWQYLS
Trigger: TGAAAGATATTGCCACTCCCATACCAGCAGAAGAGG...TATATTCCTGGGATGAAAGGATTGCCAAACCCAAATATAGACTAGATTATCCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CCA 90 bp TCATGTTCTGATCACAAGCAGAGCCAAGGTTCATTTTTAGGTCAAACTACACAATGTTTCCTTTTCTGCTaGGCCTTCTATTTTGGCATA +
Preference number: 4 (lower is better)
Translates to: SCSDHKQSQGSFLGQTTQCFLFC*AFYFGI
Trigger: TATGCCAAAATAGAAGGCCCAGCAGAAAAGGAAACA...TTGTGTAGTTTGACCTAAAAATGAACCTTGGCTCTGCTTGTGATCAGAACATGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000313070.11
ENST00000462699.5
ENST00000615869.4
CDS-3UTR CCA 90 bp TTTTTATTGCCTGCAAGCTGTTATACTGGAGCAGGAGAATATGGTATCTTGACGAATGTTAGGAATCTGTaGAAGATTAAGAGGCAGACT +
Preference number: 4 (lower is better)
Translates to: FLLPASCYTGAGEYGILTNVRNL*KIKRQT
Trigger: AGTCTGCCTCTTAATCTTCCACAGATTCCTAACATT...CGTCAAGATACCATATTCTCCTGCTCCAGTATAACAGCTTGCAGGCAATAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR CCA 90 bp CCATTGGATAATCTAGTCTATATTTGGGTTTGGCAATCCTTTCATCCCAGGAATATGTTGCTGAGCCATTaGTGGACTCATATAAAGAAG +
Preference number: 4 (lower is better)
Translates to: PLDNLVYIWVWQSFHPRNMLLSH*WTHIKK
Trigger: CTTCTTTATATGAGTCCACCAATGGCTCAGCAACAT...ATTCCTGGGATGAAAGGATTGCCAAACCCAAATATAGACTAGATTATCCAATGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR CCA 90 bp ACTGACTTCTCACAATGCTGCATTATGAGAAATATGTATCTCGCTTTACACAGAAGTCTTTGCTCTAAGTaGTGGGCAAATTCCTGTTCT +
Preference number: 4 (lower is better)
Translates to: TDFSQCCIMRNMYLALHRSLCSK*WANSCS
Trigger: AGAACAGGAATTTGCCCACCACTTAGAGCAAAGACT...TCTGTGTAAAGCGAGATACATATTTCTCATAATGCAGCATTGTGAGAAGTCAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR CCA 90 bp TCATGTTCTGATCACAAGCAGAGCCAAGGTTCATTTTTAGGTCAAACTACACAATGCCAGATCCATTCCTaGTTTTGGAACATCAACATA +
Preference number: 4 (lower is better)
Translates to: SCSDHKQSQGSFLGQTTQCQIHS*FWNINI
Trigger: TATGTTGATGTTCCAAAACCAGGAATGGATCTGGCA...TTGTGTAGTTTGACCTAAAAATGAACCTTGGCTCTGCTTGTGATCAGAACATGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR CCA 90 bp GGTGCAGTGGTCCGAACTGACTTCTCACAATGCTGCATTATGAGAAATATGTATTCTCGAAGAATATCTTaGTTTTGCCGAACAAACATA +
Preference number: 4 (lower is better)
Translates to: GAVVRTDFSQCCIMRNMYSRRIS*FCRTNI
Trigger: TATGTTTGTTCGGCAAAACCAAGATATTCTTCGAGA...ATACATATTTCTCATAATGCAGCATTGTGAGAAGTCAGTTCGGACCACTGCACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR CCA 90 bp TTGGATAATCTAGTCTATATTTGGGTTTGGCAATCCTTTCATCCCAGGAATATATGGAGCAGGAGAATATaGTATCTTGACGGAAGCACA +
Preference number: 4 (lower is better)
Translates to: LDNLVYIWVWQSFHPRNIWSRRI*YLDGST
Trigger: TGTGCTTCCGTCAAGATACCATATTCTCCTGCTCCA...TATATTCCTGGGATGAAAGGATTGCCAAACCCAAATATAGACTAGATTATCCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR CCA 90 bp GACTTCTCACAATGCTGCATTATGAGAAATATGTATCTCGCTTTACACAGAAAATGGAGCAGGAGAATATaGTATCTTGACGGAAGCACA +
Preference number: 4 (lower is better)
Translates to: DFSQCCIMRNMYLALHRKWSRRI*YLDGST
Trigger: TGTGCTTCCGTCAAGATACCATATTCTCCTGCTCCA...TTTTCTGTGTAAAGCGAGATACATATTTCTCATAATGCAGCATTGTGAGAAGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR CCA 90 bp ATTTTTATTGCCTGCAAGCTGTTATACTGGAGCAGGAGAATATGGTATCTTGACTGCAAGCTGTTATACTaGAGCAGGAGAATATGGTAT +
Preference number: 4 (lower is better)
Translates to: IFIACKLLYWSRRIWYLDCKLLY*SRRIWY
Trigger: ATACCATATTCTCCTGCTCCAGTATAACAGCTTGCA...GTCAAGATACCATATTCTCCTGCTCCAGTATAACAGCTTGCAGGCAATAAAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR CCA 90 bp ACTGACTTCTCACAATGCTGCATTATGAGAAATATGTATCTCGCTTTACACAGAATGGGAGAACGAATCTaGAGGTCCAAGTTGTTTCAT +
Preference number: 4 (lower is better)
Translates to: TDFSQCCIMRNMYLALHRMGERI*RSKLFH
Trigger: ATGAAACAACTTGGACCTCCAGATTCGTTCTCCCAT...TCTGTGTAAAGCGAGATACATATTTCTCATAATGCAGCATTGTGAGAAGTCAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CCA 90 bp GACTTCTCACAATGCTGCATTATGAGAAATATGTATCTCGCTTTACACAGAAAACTAGCAGGAGATGCCTaGTTCATGGTCTCTTCTATT +
Preference number: 4 (lower is better)
Translates to: DFSQCCIMRNMYLALHRKLAGDA*FMVSSI
Trigger: AATAGAAGAGACCATGAACCAGGCATCTCCTGCTAG...TTTTCTGTGTAAAGCGAGATACATATTTCTCATAATGCAGCATTGTGAGAAGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
CDS-3UTR TCA 90 bp TCATGTTCTGATCACAAGCAGAGCCAAGGTTCATTTTTAGGTCAAACTACACAATCCATACCATGTTTCTaGAAACGATCTGCATCTTTA +
Preference number: 4 (lower is better)
Translates to: SCSDHKQSQGSFLGQTTQSIPCF*KRSASL
Trigger: TAAAGATGCAGATCGTTTTCAGAAACATGGTATGGA...TTGTGTAGTTTGACCTAAAAATGAACCTTGGCTCTGCTTGTGATCAGAACATGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313070.11
ENST00000449022.7
CDS-3UTR TCA 90 bp ATTTTTATTGCCTGCAAGCTGTTATACTGGAGCAGGAGAATATGGTATCTTGACCTGAAATGGCTTATCTaGTTTTCTAAAAGGGAAGAG +
Preference number: 4 (lower is better)
Translates to: IFIACKLLYWSRRIWYLDLKWLI*FSKREE
Trigger: CTCTTCCCTTTTAGAAAATCAGATAAGCCATTTCAG...GTCAAGATACCATATTCTCCTGCTCCAGTATAACAGCTTGCAGGCAATAAAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR TCA 90 bp CCATTGGATAATCTAGTCTATATTTGGGTTTGGCAATCCTTTCATCCCAGGAATCTGAAATGGCTTATCTaGTTTTCTAAAAGGGAAGAG +
Preference number: 4 (lower is better)
Translates to: PLDNLVYIWVWQSFHPRNLKWLI*FSKREE
Trigger: CTCTTCCCTTTTAGAAAATCAGATAAGCCATTTCAG...ATTCCTGGGATGAAAGGATTGCCAAACCCAAATATAGACTAGATTATCCAATGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR TCA 90 bp GACTTCTCACAATGCTGCATTATGAGAAATATGTATCTCGCTTTACACAGAAAATCTCGAGACATTTTCTaGCCACTTTCTTCACCTCTT +
Preference number: 4 (lower is better)
Translates to: DFSQCCIMRNMYLALHRKSRDIF*PLSSPL
Trigger: AAGAGGTGAAGAAAGTGGTCAGAAAATGTCTCGAGA...TTTTCTGTGTAAAGCGAGATACATATTTCTCATAATGCAGCATTGTGAGAAGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000615869.4
CDS-3UTR TCA 90 bp TTGGATAATCTAGTCTATATTTGGGTTTGGCAATCCTTTCATCCCAGGAATATACAGTTCTTGTTCTTTTaGCACAGGCCTCTAGCATAT +
Preference number: 4 (lower is better)
Translates to: LDNLVYIWVWQSFHPRNIQFLFF*HRPLAY
Trigger: ATATGCTAGAGGCCTGTGTCAAAAGAACAAGAACTG...TATATTCCTGGGATGAAAGGATTGCCAAACCCAAATATAGACTAGATTATCCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR TCA 90 bp TCATGTTCTGATCACAAGCAGAGCCAAGGTTCATTTTTAGGTCAAACTACACAACAGATCATCTATTTTTaGATGGTACTGTTGCTCTTG +
Preference number: 4 (lower is better)
Translates to: SCSDHKQSQGSFLGQTTQQIIYF*MVLLLL
Trigger: CAAGAGCAACAGTACCATTCAAAAATAGATGATCTG...TTGTGTAGTTTGACCTAAAAATGAACCTTGGCTCTGCTTGTGATCAGAACATGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR TCA 90 bp GACTTCTCACAATGCTGCATTATGAGAAATATGTATCTCGCTTTACACAGAAAACAGCTGCTTTCACAGTaGATGACAGAATGGATGAAA +
Preference number: 4 (lower is better)
Translates to: DFSQCCIMRNMYLALHRKQLLSQ*MTEWMK
Trigger: TTTCATCCATTCTGTCATTCACTGTGAAAGCAGCTG...TTTTCTGTGTAAAGCGAGATACATATTTCTCATAATGCAGCATTGTGAGAAGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR TCA 90 bp ATTTTTATTGCCTGCAAGCTGTTATACTGGAGCAGGAGAATATGGTATCTTGACCACAATGCTGCATTATaGGAAATATGTATCTCGCTT +
Preference number: 4 (lower is better)
Translates to: IFIACKLLYWSRRIWYLDHNAAL*EICISL
Trigger: AAGCGAGATACATATTTCTCATAATGCAGCATTGTG...GTCAAGATACCATATTCTCCTGCTCCAGTATAACAGCTTGCAGGCAATAAAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR TCA 90 bp CCATTGGATAATCTAGTCTATATTTGGGTTTGGCAATCCTTTCATCCCAGGAATCACAATGCTGCATTATaGGAAATATGTATCTCGCTT +
Preference number: 4 (lower is better)
Translates to: PLDNLVYIWVWQSFHPRNHNAAL*EICISL
Trigger: AAGCGAGATACATATTTCTCATAATGCAGCATTGTG...ATTCCTGGGATGAAAGGATTGCCAAACCCAAATATAGACTAGATTATCCAATGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR GCA 90 bp CCATTGGATAATCTAGTCTATATTTGGGTTTGGCAATCCTTTCATCCCAGGAATCGTTCTTTCAGTAACTaGAACTGTTGTTTGTTAAGC +
Preference number: 4 (lower is better)
Translates to: PLDNLVYIWVWQSFHPRNRSFSN*NCCLLS
Trigger: GCTTAACAAACAACAGTTGCAGTTACTGAAAGAACG...ATTCCTGGGATGAAAGGATTGCCAAACCCAAATATAGACTAGATTATCCAATGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR GCA 90 bp GACTTCTCACAATGCTGCATTATGAGAAATATGTATCTCGCTTTACACAGAAAAACTGACTTCAGGCCTTaGACTTCCATTATGACAATC +
Preference number: 4 (lower is better)
Translates to: DFSQCCIMRNMYLALHRKTDFRP*TSIMTI
Trigger: GATTGTCATAATGGAAGTGCAAGGCCTGAAGTCAGT...TTTTCTGTGTAAAGCGAGATACATATTTCTCATAATGCAGCATTGTGAGAAGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000615869.4
CDS-3UTR GCA 90 bp TTTTTATTGCCTGCAAGCTGTTATACTGGAGCAGGAGAATATGGTATCTTGACGTACAGATATCCACTATaGTTCATATGTGCTGGTTTA +
Preference number: 4 (lower is better)
Translates to: FLLPASCYTGAGEYGILTYRYPL*FICAGL
Trigger: TAAACCAGCACATATGAAGCATAGTGGATATCTGTA...CGTCAAGATACCATATTCTCCTGCTCCAGTATAACAGCTTGCAGGCAATAAAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR GCA 90 bp GACTTCTCACAATGCTGCATTATGAGAAATATGTATCTCGCTTTACACAGAAAAATGTTCCATCAGTTCTaGAAGGTAGCAGAGATGTCT +
Preference number: 4 (lower is better)
Translates to: DFSQCCIMRNMYLALHRKMFHQF*KVAEMS
Trigger: AGACATCTCTGCTACCTTGCAGAACTGATGGAACAT...TTTTCTGTGTAAAGCGAGATACATATTTCTCATAATGCAGCATTGTGAGAAGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000615869.4
CDS-3UTR GCA 90 bp CCATTGGATAATCTAGTCTATATTTGGGTTTGGCAATCCTTTCATCCCAGGAATTCAAAGACAAACATTTaGAGTGCATCAAGCTTCCAA +
Preference number: 4 (lower is better)
Translates to: PLDNLVYIWVWQSFHPRNSKTNI*SASSFQ
Trigger: TTGGAAGCTTGATGCACTGCAAATGTTTGTCTTTGA...ATTCCTGGGATGAAAGGATTGCCAAACCCAAATATAGACTAGATTATCCAATGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR GCA 90 bp TCATGTTCTGATCACAAGCAGAGCCAAGGTTCATTTTTAGGTCAAACTACACAATCAAAGACAAACATTTaGAGTGCATCAAGCTTCCAA +
Preference number: 4 (lower is better)
Translates to: SCSDHKQSQGSFLGQTTQSKTNI*SASSFQ
Trigger: TTGGAAGCTTGATGCACTGCAAATGTTTGTCTTTGA...TTGTGTAGTTTGACCTAAAAATGAACCTTGGCTCTGCTTGTGATCAGAACATGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR GCA 90 bp ACTGACTTCTCACAATGCTGCATTATGAGAAATATGTATCTCGCTTTACACAGACATAATATAGGTGTCTaGCAGATCCATTCCTGGTTT +
Preference number: 4 (lower is better)
Translates to: TDFSQCCIMRNMYLALHRHNIGV*QIHSWF
Trigger: AAACCAGGAATGGATCTGGCAGACACCTATATTATG...TCTGTGTAAAGCGAGATACATATTTCTCATAATGCAGCATTGTGAGAAGTCAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR GCA 90 bp ATTTTTATTGCCTGCAAGCTGTTATACTGGAGCAGGAGAATATGGTATCTTGACTGCAGTAGCACAATCTaGCAATATGTTTTGGGAAAT +
Preference number: 4 (lower is better)
Translates to: IFIACKLLYWSRRIWYLDCSSTI*QYVLGN
Trigger: ATTTCCCAAAACATATTGGCAGATTGTGCTACTGCA...GTCAAGATACCATATTCTCCTGCTCCAGTATAACAGCTTGCAGGCAATAAAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR GCA 90 bp CCATTGGATAATCTAGTCTATATTTGGGTTTGGCAATCCTTTCATCCCAGGAATTGCAGTAGCACAATCTaGCAATATGTTTTGGGAAAT +
Preference number: 4 (lower is better)
Translates to: PLDNLVYIWVWQSFHPRNCSSTI*QYVLGN
Trigger: ATTTCCCAAAACATATTGGCAGATTGTGCTACTGCA...ATTCCTGGGATGAAAGGATTGCCAAACCCAAATATAGACTAGATTATCCAATGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR GCA 90 bp TCATGTTCTGATCACAAGCAGAGCCAAGGTTCATTTTTAGGTCAAACTACACAATGCAGTAGCACAATCTaGCAATATGTTTTGGGAAAT +
Preference number: 4 (lower is better)
Translates to: SCSDHKQSQGSFLGQTTQCSSTI*QYVLGN
Trigger: ATTTCCCAAAACATATTGGCAGATTGTGCTACTGCA...TTGTGTAGTTTGACCTAAAAATGAACCTTGGCTCTGCTTGTGATCAGAACATGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR GCA 90 bp GACTTCTCACAATGCTGCATTATGAGAAATATGTATCTCGCTTTACACAGAAAAATAAAGCTGAGCATCTaGATGGAGAGTTCCTCCTTT +
Preference number: 4 (lower is better)
Translates to: DFSQCCIMRNMYLALHRKIKLSI*MESSSF
Trigger: AAAGGAGGAACTCTCCATGCAGATGCTCAGCTTTAT...TTTTCTGTGTAAAGCGAGATACATATTTCTCATAATGCAGCATTGTGAGAAGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000412584.6
CDS-3UTR CCA 90 bp ATTTTTATTGCCTGCAAGCTGTTATACTGGAGCAGGAGAATATGGTATCTTGACAAATGGCATCATATTTaGCTATCCATGAGCTCAACA +
Preference number: 4 (lower is better)
Translates to: IFIACKLLYWSRRIWYLDKWHHI*LSMSST
Trigger: TGTTGAGCTCATGGATAGCCAAATATGATGCCATTT...GTCAAGATACCATATTCTCCTGCTCCAGTATAACAGCTTGCAGGCAATAAAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CCA 90 bp TCATGTTCTGATCACAAGCAGAGCCAAGGTTCATTTTTAGGTCAAACTACACAAAAATGGCATCATATTTaGCTATCCATGAGCTCAACA +
Preference number: 4 (lower is better)
Translates to: SCSDHKQSQGSFLGQTTQKWHHI*LSMSST
Trigger: TGTTGAGCTCATGGATAGCCAAATATGATGCCATTT...TTGTGTAGTTTGACCTAAAAATGAACCTTGGCTCTGCTTGTGATCAGAACATGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CCA 90 bp GACTTCTCACAATGCTGCATTATGAGAAATATGTATCTCGCTTTACACAGAAAAACCACCTTTCGAAACTaGAAGACTTTCCAAATTGGC +
Preference number: 4 (lower is better)
Translates to: DFSQCCIMRNMYLALHRKTTFRN*KTFQIG
Trigger: GCCAATTTGGAAAGTCTTCCAGTTTCGAAAGGTGGT...TTTTCTGTGTAAAGCGAGATACATATTTCTCATAATGCAGCATTGTGAGAAGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CCA 90 bp GACTTCTCACAATGCTGCATTATGAGAAATATGTATCTCGCTTTACACAGAAAAATGCTTCATATGTGCTaGTTTATCCATTCGCACTGC +
Preference number: 4 (lower is better)
Translates to: DFSQCCIMRNMYLALHRKMLHMC*FIHSHC
Trigger: GCAGTGCGAATGGATAAACCAGCACATATGAAGCAT...TTTTCTGTGTAAAGCGAGATACATATTTCTCATAATGCAGCATTGTGAGAAGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CCA 90 bp TTGGATAATCTAGTCTATATTTGGGTTTGGCAATCCTTTCATCCCAGGAATATAATGCTTCATATGTGCTaGTTTATCCATTCGCACTGC +
Preference number: 4 (lower is better)
Translates to: LDNLVYIWVWQSFHPRNIMLHMC*FIHSHC
Trigger: GCAGTGCGAATGGATAAACCAGCACATATGAAGCAT...TATATTCCTGGGATGAAAGGATTGCCAAACCCAAATATAGACTAGATTATCCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CCA 90 bp ACTGACTTCTCACAATGCTGCATTATGAGAAATATGTATCTCGCTTTACACAGACCTGTTCATCATCACTaGCAAAGATTACAGTATCTC +
Preference number: 4 (lower is better)
Translates to: TDFSQCCIMRNMYLALHRPVHHH*QRLQYL
Trigger: GAGATACTGTAATCTTTGCCAGTGATGATGAACAGG...TCTGTGTAAAGCGAGATACATATTTCTCATAATGCAGCATTGTGAGAAGTCAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CCA 90 bp ACTGACTTCTCACAATGCTGCATTATGAGAAATATGTATCTCGCTTTACACAGATATATGATTGACCTGTaGCCCTATACATGGCTTGAA +
Preference number: 4 (lower is better)
Translates to: TDFSQCCIMRNMYLALHRYMIDL*PYTWLE
Trigger: TTCAAGCCATGTATAGGGCCACAGGTCAATCATATA...TCTGTGTAAAGCGAGATACATATTTCTCATAATGCAGCATTGTGAGAAGTCAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CCA 90 bp ACTGACTTCTCACAATGCTGCATTATGAGAAATATGTATCTCGCTTTACACAGATCCAAAGTCTGCCTCTaGAGTATTCTAAAAAGGAAG +
Preference number: 4 (lower is better)
Translates to: TDFSQCCIMRNMYLALHRSKVCL*SILKRK
Trigger: CTTCCTTTTTAGAATACTCCAGAGGCAGACTTTGGA...TCTGTGTAAAGCGAGATACATATTTCTCATAATGCAGCATTGTGAGAAGTCAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CCA 90 bp ACTGACTTCTCACAATGCTGCATTATGAGAAATATGTATCTCGCTTTACACAGATGCCAGATCCATTCCTaGTTTTGGAACATCAACATA +
Preference number: 4 (lower is better)
Translates to: TDFSQCCIMRNMYLALHRCQIHS*FWNINI
Trigger: TATGTTGATGTTCCAAAACCAGGAATGGATCTGGCA...TCTGTGTAAAGCGAGATACATATTTCTCATAATGCAGCATTGTGAGAAGTCAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR CCA 90 bp ACTGACTTCTCACAATGCTGCATTATGAGAAATATGTATCTCGCTTTACACAGATGCAAGCTGTTATACTaGAGCAGGAGAATATGGTAT +
Preference number: 4 (lower is better)
Translates to: TDFSQCCIMRNMYLALHRCKLLY*SRRIWY
Trigger: ATACCATATTCTCCTGCTCCAGTATAACAGCTTGCA...TCTGTGTAAAGCGAGATACATATTTCTCATAATGCAGCATTGTGAGAAGTCAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR CCA 90 bp GACTTCTCACAATGCTGCATTATGAGAAATATGTATCTCGCTTTACACAGAAAAATGGGAGAACGAATCTaGAGGTCCAAGTTGTTTCAT +
Preference number: 4 (lower is better)
Translates to: DFSQCCIMRNMYLALHRKMGERI*RSKLFH
Trigger: ATGAAACAACTTGGACCTCCAGATTCGTTCTCCCAT...TTTTCTGTGTAAAGCGAGATACATATTTCTCATAATGCAGCATTGTGAGAAGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CCA 90 bp TTGGATAATCTAGTCTATATTTGGGTTTGGCAATCCTTTCATCCCAGGAATATAGAGATGCCTGGTTCATaGTCTCTTCTATTTTGGCAT +
Preference number: 4 (lower is better)
Translates to: LDNLVYIWVWQSFHPRNIEMPGS*SLLFWH
Trigger: ATGCCAAAATAGAAGAGACCATGAACCAGGCATCTC...TATATTCCTGGGATGAAAGGATTGCCAAACCCAAATATAGACTAGATTATCCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334010.11
ENST00000449022.7
CDS-3UTR TCA 90 bp GACTTCTCACAATGCTGCATTATGAGAAATATGTATCTCGCTTTACACAGAAAATTCTTTTTCTTCCACTaGAACAGTCCCAATTCCATC +
Preference number: 4 (lower is better)
Translates to: DFSQCCIMRNMYLALHRKFFFFH*NSPNSI
Trigger: GATGGAATTGGGACTGTTTCAGTGGAAGAAAAAGAA...TTTTCTGTGTAAAGCGAGATACATATTTCTCATAATGCAGCATTGTGAGAAGTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000615869.4
CDS-3UTR TCA 90 bp GACTTCTCACAATGCTGCATTATGAGAAATATGTATCTCGCTTTACACAGAAAATTGCCTTTTGTAGCTTaGGTTCAAATGCAGTTCTTG +
Preference number: 4 (lower is better)
Translates to: DFSQCCIMRNMYLALHRKLPFVA*VQMQFL
Trigger: CAAGAACTGCATTTGAACTCAAGCTACAAAAGGCAA...TTTTCTGTGTAAAGCGAGATACATATTTCTCATAATGCAGCATTGTGAGAAGTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR TCA 90 bp TTGGATAATCTAGTCTATATTTGGGTTTGGCAATCCTTTCATCCCAGGAATATATTGCCTTTTGTAGCTTaGGTTCAAATGCAGTTCTTG +
Preference number: 4 (lower is better)
Translates to: LDNLVYIWVWQSFHPRNILPFVA*VQMQFL
Trigger: CAAGAACTGCATTTGAACTCAAGCTACAAAAGGCAA...TATATTCCTGGGATGAAAGGATTGCCAAACCCAAATATAGACTAGATTATCCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR TCA 90 bp ACTGACTTCTCACAATGCTGCATTATGAGAAATATGTATCTCGCTTTACACAGACACAATGCTGCATTATaGGAAATATGTATCTCGCTT +
Preference number: 4 (lower is better)
Translates to: TDFSQCCIMRNMYLALHRHNAAL*EICISL
Trigger: AAGCGAGATACATATTTCTCATAATGCAGCATTGTG...TCTGTGTAAAGCGAGATACATATTTCTCATAATGCAGCATTGTGAGAAGTCAGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR GCA 90 bp GACTTCTCACAATGCTGCATTATGAGAAATATGTATCTCGCTTTACACAGAAAAAACTGCGTTGCAAAATaGTTCGTCAGCTACAATTTG +
Preference number: 4 (lower is better)
Translates to: DFSQCCIMRNMYLALHRKNCVAK*FVSYNL
Trigger: CAAATTGTAGCTGACGAAGCATTTTGCAACGCAGTT...TTTTCTGTGTAAAGCGAGATACATATTTCTCATAATGCAGCATTGTGAGAAGTC
37% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000615869.4
CDS-3UTR GCA 90 bp GACTTCTCACAATGCTGCATTATGAGAAATATGTATCTCGCTTTACACAGAAAATCAACACTGTCTCTTTaGTCAAGCCATCTATTTCTG +
Preference number: 4 (lower is better)
Translates to: DFSQCCIMRNMYLALHRKSTLSL*SSHLFL
Trigger: CAGAAATAGATGGCTTGAGCAAAGAGACAGTGTTGA...TTTTCTGTGTAAAGCGAGATACATATTTCTCATAATGCAGCATTGTGAGAAGTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000615869.4
CDS-3UTR GCA 90 bp TTGGATAATCTAGTCTATATTTGGGTTTGGCAATCCTTTCATCCCAGGAATATATCAACACTGTCTCTTTaGTCAAGCCATCTATTTCTG +
Preference number: 4 (lower is better)
Translates to: LDNLVYIWVWQSFHPRNISTLSL*SSHLFL
Trigger: CAGAAATAGATGGCTTGAGCAAAGAGACAGTGTTGA...TATATTCCTGGGATGAAAGGATTGCCAAACCCAAATATAGACTAGATTATCCAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR GCA 90 bp GACTTCTCACAATGCTGCATTATGAGAAATATGTATCTCGCTTTACACAGAAAAACTATGCTTCATATGTaGTGGTTTATCCATTCGCAC +
Preference number: 4 (lower is better)
Translates to: DFSQCCIMRNMYLALHRKTMLHM*WFIHSH
Trigger: GTGCGAATGGATAAACCAGCACATATGAAGCATAGT...TTTTCTGTGTAAAGCGAGATACATATTTCTCATAATGCAGCATTGTGAGAAGTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000615869.4
CDS-3UTR GCA 90 bp CCATTGGATAATCTAGTCTATATTTGGGTTTGGCAATCCTTTCATCCCAGGAATTACAGATATCCACTATaGTTCATATGTGCTGGTTTA +
Preference number: 4 (lower is better)
Translates to: PLDNLVYIWVWQSFHPRNYRYPL*FICAGL
Trigger: TAAACCAGCACATATGAAGCATAGTGGATATCTGTA...ATTCCTGGGATGAAAGGATTGCCAAACCCAAATATAGACTAGATTATCCAATGG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR GCA 90 bp TTGGATAATCTAGTCTATATTTGGGTTTGGCAATCCTTTCATCCCAGGAATATACAGAGTTTGGTGCTTTaGTTTTTGGCATCGACTAAT +
Preference number: 4 (lower is better)
Translates to: LDNLVYIWVWQSFHPRNIQSLVL*FLASTN
Trigger: ATTAGTCGATGCCAAAAAGCAAAGCACCAAACTCTG...TATATTCCTGGGATGAAAGGATTGCCAAACCCAAATATAGACTAGATTATCCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR GCA 90 bp ACTGACTTCTCACAATGCTGCATTATGAGAAATATGTATCTCGCTTTACACAGATGGATGAAAAGAAAGTaGCTTCATCATACCTTGACA +
Preference number: 4 (lower is better)
Translates to: TDFSQCCIMRNMYLALHRWMKRK*LHHTLT
Trigger: TGTCAAGGTATGATGAAGGCACTTTCTTTTCATCCA...TCTGTGTAAAGCGAGATACATATTTCTCATAATGCAGCATTGTGAGAAGTCAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR GCA 90 bp CCATTGGATAATCTAGTCTATATTTGGGTTTGGCAATCCTTTCATCCCAGGAATTACCTCCACTTATTCTaGATTAACTGCCTTCATTTA +
Preference number: 4 (lower is better)
Translates to: PLDNLVYIWVWQSFHPRNYLHLF*INCLHL
Trigger: TAAATGAAGGCAGTTAATGCAGAATAAGTGGAGGTA...ATTCCTGGGATGAAAGGATTGCCAAACCCAAATATAGACTAGATTATCCAATGG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR GCA 90 bp ACTGACTTCTCACAATGCTGCATTATGAGAAATATGTATCTCGCTTTACACAGAAGAACATTCCCAAACTaGCTTTCAAAGATAGTGAGT +
Preference number: 4 (lower is better)
Translates to: TDFSQCCIMRNMYLALHRRTFPN*LSKIVS
Trigger: ACTCACTATCTTTGAAAGGCAGTTTGGGAATGTTCT...TCTGTGTAAAGCGAGATACATATTTCTCATAATGCAGCATTGTGAGAAGTCAGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CCA 90 bp GACTTCTCACAATGCTGCATTATGAGAAATATGTATCTCGCTTTACACAGAAAACTTCACCTCTGTAAATaGCATCATATTTGGCTATCC +
Preference number: 4 (lower is better)
Translates to: DFSQCCIMRNMYLALHRKLHLCK*HHIWLS
Trigger: GGATAGCCAAATATGATGCCATTTACAGAGGTGAAG...TTTTCTGTGTAAAGCGAGATACATATTTCTCATAATGCAGCATTGTGAGAAGTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CCA 90 bp GACTTCTCACAATGCTGCATTATGAGAAATATGTATCTCGCTTTACACAGAAAACCTGTTCATCATCACTaGCAAAGATTACAGTATCTC +
Preference number: 4 (lower is better)
Translates to: DFSQCCIMRNMYLALHRKPVHHH*QRLQYL
Trigger: GAGATACTGTAATCTTTGCCAGTGATGATGAACAGG...TTTTCTGTGTAAAGCGAGATACATATTTCTCATAATGCAGCATTGTGAGAAGTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CCA 90 bp GACTTCTCACAATGCTGCATTATGAGAAATATGTATCTCGCTTTACACAGAAAATATATGATTGACCTGTaGCCCTATACATGGCTTGAA +
Preference number: 4 (lower is better)
Translates to: DFSQCCIMRNMYLALHRKYMIDL*PYTWLE
Trigger: TTCAAGCCATGTATAGGGCCACAGGTCAATCATATA...TTTTCTGTGTAAAGCGAGATACATATTTCTCATAATGCAGCATTGTGAGAAGTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CCA 90 bp TTGGATAATCTAGTCTATATTTGGGTTTGGCAATCCTTTCATCCCAGGAATATATCCAAAGTCTGCCTCTaGAGTATTCTAAAAAGGAAG +
Preference number: 4 (lower is better)
Translates to: LDNLVYIWVWQSFHPRNISKVCL*SILKRK
Trigger: CTTCCTTTTTAGAATACTCCAGAGGCAGACTTTGGA...TATATTCCTGGGATGAAAGGATTGCCAAACCCAAATATAGACTAGATTATCCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CCA 90 bp GACTTCTCACAATGCTGCATTATGAGAAATATGTATCTCGCTTTACACAGAAAATCCAAAGTCTGCCTCTaGAGTATTCTAAAAAGGAAG +
Preference number: 4 (lower is better)
Translates to: DFSQCCIMRNMYLALHRKSKVCL*SILKRK
Trigger: CTTCCTTTTTAGAATACTCCAGAGGCAGACTTTGGA...TTTTCTGTGTAAAGCGAGATACATATTTCTCATAATGCAGCATTGTGAGAAGTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CCA 90 bp ATTTTTATTGCCTGCAAGCTGTTATACTGGAGCAGGAGAATATGGTATCTTGACATCCATTCCTGGTTTTaGAACATCAACATATTTTGC +
Preference number: 4 (lower is better)
Translates to: IFIACKLLYWSRRIWYLDIHSWF*NINIFC
Trigger: GCAAAATATGTTGATGTTCCAAAACCAGGAATGGAT...GTCAAGATACCATATTCTCCTGCTCCAGTATAACAGCTTGCAGGCAATAAAAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR CCA 90 bp TCATGTTCTGATCACAAGCAGAGCCAAGGTTCATTTTTAGGTCAAACTACACAAATCCATTCCTGGTTTTaGAACATCAACATATTTTGC +
Preference number: 4 (lower is better)
Translates to: SCSDHKQSQGSFLGQTTQIHSWF*NINIFC
Trigger: GCAAAATATGTTGATGTTCCAAAACCAGGAATGGAT...TTGTGTAGTTTGACCTAAAAATGAACCTTGGCTCTGCTTGTGATCAGAACATGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR CCA 90 bp CCATTGGATAATCTAGTCTATATTTGGGTTTGGCAATCCTTTCATCCCAGGAATATCCATTCCTGGTTTTaGAACATCAACATATTTTGC +
Preference number: 4 (lower is better)
Translates to: PLDNLVYIWVWQSFHPRNIHSWF*NINIFC
Trigger: GCAAAATATGTTGATGTTCCAAAACCAGGAATGGAT...ATTCCTGGGATGAAAGGATTGCCAAACCCAAATATAGACTAGATTATCCAATGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR CCA 90 bp TTGGATAATCTAGTCTATATTTGGGTTTGGCAATCCTTTCATCCCAGGAATATATGCCAGATCCATTCCTaGTTTTGGAACATCAACATA +
Preference number: 4 (lower is better)
Translates to: LDNLVYIWVWQSFHPRNICQIHS*FWNINI
Trigger: TATGTTGATGTTCCAAAACCAGGAATGGATCTGGCA...TATATTCCTGGGATGAAAGGATTGCCAAACCCAAATATAGACTAGATTATCCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR CCA 90 bp GACTTCTCACAATGCTGCATTATGAGAAATATGTATCTCGCTTTACACAGAAAATGCCAGATCCATTCCTaGTTTTGGAACATCAACATA +
Preference number: 4 (lower is better)
Translates to: DFSQCCIMRNMYLALHRKCQIHS*FWNINI
Trigger: TATGTTGATGTTCCAAAACCAGGAATGGATCTGGCA...TTTTCTGTGTAAAGCGAGATACATATTTCTCATAATGCAGCATTGTGAGAAGTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR CCA 90 bp CCATTGGATAATCTAGTCTATATTTGGGTTTGGCAATCCTTTCATCCCAGGAATTCTCGAAGAATATCTTaGTTTTGCCGAACAAACATA +
Preference number: 4 (lower is better)
Translates to: PLDNLVYIWVWQSFHPRNSRRIS*FCRTNI
Trigger: TATGTTTGTTCGGCAAAACCAAGATATTCTTCGAGA...ATTCCTGGGATGAAAGGATTGCCAAACCCAAATATAGACTAGATTATCCAATGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR CCA 90 bp TCATGTTCTGATCACAAGCAGAGCCAAGGTTCATTTTTAGGTCAAACTACACAATCTCGAAGAATATCTTaGTTTTGCCGAACAAACATA +
Preference number: 4 (lower is better)
Translates to: SCSDHKQSQGSFLGQTTQSRRIS*FCRTNI
Trigger: TATGTTTGTTCGGCAAAACCAAGATATTCTTCGAGA...TTGTGTAGTTTGACCTAAAAATGAACCTTGGCTCTGCTTGTGATCAGAACATGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR TCA 90 bp GACTTCTCACAATGCTGCATTATGAGAAATATGTATCTCGCTTTACACAGAAAACTGAAATGGCTTATCTaGTTTTCTAAAAGGGAAGAG +
Preference number: 4 (lower is better)
Translates to: DFSQCCIMRNMYLALHRKLKWLI*FSKREE
Trigger: CTCTTCCCTTTTAGAAAATCAGATAAGCCATTTCAG...TTTTCTGTGTAAAGCGAGATACATATTTCTCATAATGCAGCATTGTGAGAAGTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000615869.4
CDS-3UTR GCA 90 bp GACTTCTCACAATGCTGCATTATGAGAAATATGTATCTCGCTTTACACAGAAAATCAAAGACAAACATTTaGAGTGCATCAAGCTTCCAA +
Preference number: 4 (lower is better)
Translates to: DFSQCCIMRNMYLALHRKSKTNI*SASSFQ
Trigger: TTGGAAGCTTGATGCACTGCAAATGTTTGTCTTTGA...TTTTCTGTGTAAAGCGAGATACATATTTCTCATAATGCAGCATTGTGAGAAGTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR GCA 90 bp GACTTCTCACAATGCTGCATTATGAGAAATATGTATCTCGCTTTACACAGAAAATGGATGAAAAGAAAGTaGCTTCATCATACCTTGACA +
Preference number: 4 (lower is better)
Translates to: DFSQCCIMRNMYLALHRKWMKRK*LHHTLT
Trigger: TGTCAAGGTATGATGAAGGCACTTTCTTTTCATCCA...TTTTCTGTGTAAAGCGAGATACATATTTCTCATAATGCAGCATTGTGAGAAGTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR GCA 90 bp ACTGACTTCTCACAATGCTGCATTATGAGAAATATGTATCTCGCTTTACACAGAACTGACTTCTCACAATaGTGCATTATGAGAAATATG +
Preference number: 4 (lower is better)
Translates to: TDFSQCCIMRNMYLALHRTDFSQ*CIMRNM
Trigger: CATATTTCTCATAATGCAGCATTGTGAGAAGTCAGT...TCTGTGTAAAGCGAGATACATATTTCTCATAATGCAGCATTGTGAGAAGTCAGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR GCA 90 bp TTGGATAATCTAGTCTATATTTGGGTTTGGCAATCCTTTCATCCCAGGAATATATGCAGTAGCACAATCTaGCAATATGTTTTGGGAAAT +
Preference number: 4 (lower is better)
Translates to: LDNLVYIWVWQSFHPRNICSSTI*QYVLGN
Trigger: ATTTCCCAAAACATATTGGCAGATTGTGCTACTGCA...TATATTCCTGGGATGAAAGGATTGCCAAACCCAAATATAGACTAGATTATCCAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CCA 90 bp TTGGATAATCTAGTCTATATTTGGGTTTGGCAATCCTTTCATCCCAGGAATATAAATGTTAGGAATCTGTaGAAGATTAAGAGGCAGACT +
Preference number: 4 (lower is better)
Translates to: LDNLVYIWVWQSFHPRNINVRNL*KIKRQT
Trigger: AGTCTGCCTCTTAATCTTCCACAGATTCCTAACATT...TATATTCCTGGGATGAAAGGATTGCCAAACCCAAATATAGACTAGATTATCCAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR GCA 90 bp GACTTCTCACAATGCTGCATTATGAGAAATATGTATCTCGCTTTACACAGAAAAATTAGTTTAAGTCTTTaGTCTAAGTGGTGGGCAAAT +
Preference number: 4 (lower is better)
Translates to: DFSQCCIMRNMYLALHRKISLSL*SKWWAN
Trigger: ATTTGCCCACCACTTAGAGCAAAGACTTAAACTAAT...TTTTCTGTGTAAAGCGAGATACATATTTCTCATAATGCAGCATTGTGAGAAGTC
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR GCA 90 bp GACTTCTCACAATGCTGCATTATGAGAAATATGTATCTCGCTTTACACAGAAAAACTGACTTCTCACAATaGTGCATTATGAGAAATATG +
Preference number: 4 (lower is better)
Translates to: DFSQCCIMRNMYLALHRKTDFSQ*CIMRNM
Trigger: CATATTTCTCATAATGCAGCATTGTGAGAAGTCAGT...TTTTCTGTGTAAAGCGAGATACATATTTCTCATAATGCAGCATTGTGAGAAGTC
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR GCA 90 bp TTGGATAATCTAGTCTATATTTGGGTTTGGCAATCCTTTCATCCCAGGAATATAACTGACTTCTCACAATaGTGCATTATGAGAAATATG +
Preference number: 4 (lower is better)
Translates to: LDNLVYIWVWQSFHPRNITDFSQ*CIMRNM
Trigger: CATATTTCTCATAATGCAGCATTGTGAGAAGTCAGT...TATATTCCTGGGATGAAAGGATTGCCAAACCCAAATATAGACTAGATTATCCAA
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR GCA 90 bp TTGGATAATCTAGTCTATATTTGGGTTTGGCAATCCTTTCATCCCAGGAATATATACCTCCACTTATTCTaGATTAACTGCCTTCATTTA +
Preference number: 4 (lower is better)
Translates to: LDNLVYIWVWQSFHPRNIYLHLF*INCLHL
Trigger: TAAATGAAGGCAGTTAATGCAGAATAAGTGGAGGTA...TATATTCCTGGGATGAAAGGATTGCCAAACCCAAATATAGACTAGATTATCCAA
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CCA 90 bp GACTTCTCACAATGCTGCATTATGAGAAATATGTATCTCGCTTTACACAGAAAAATCCATTCCTGGTTTTaGAACATCAACATATTTTGC +
Preference number: 4 (lower is better)
Translates to: DFSQCCIMRNMYLALHRKIHSWF*NINIFC
Trigger: GCAAAATATGTTGATGTTCCAAAACCAGGAATGGAT...TTTTCTGTGTAAAGCGAGATACATATTTCTCATAATGCAGCATTGTGAGAAGTC
34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS GCA 90 bp GGCGCGTCCCGCCGCCCTTCCCGAGTCGGGGCTGGAGGAGCTCGCTaGGAGCTGCCGGCTGCCACCAGCACATCGCGGCTTTCCTCTTCC +
Preference number: 5 (lower is better)
Translates to: GASRRPSRVGAGGAR*ELPAATSTSRLSSS
Trigger: GGAAGAGGAAAGCCGCGATGTGCTGGTGGCAGCCGGCAGCTCGCAGCGAGCTCCTCCAGCCCCGACTCGGGAAGGGCGGCGGGACGCGCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000615869.4
CDS GCA 90 bp CCCGCCGCCCTTCCCGAGTCGGGGCTGGAGGAGCTCGCTGCGAGCTaGCGGCTGCCACCAGCACATCGCGGCTTTCCTCTTCCAGCCCCT +
Preference number: 5 (lower is better)
Translates to: PAALPESGLEELAAS*RLPPAHRGFPLPAP
Trigger: AGGGGCTGGAAGAGGAAAGCCGCGATGTGCTGGTGGCAGCCGGCAGCTCGCAGCGAGCTCCTCCAGCCCCGACTCGGGAAGGGCGGCGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000615869.4
CDS CCA 90 bp AGCTGCAGGCGGATCCTCCGCTCCTGCTCATCGTCCAGCTGCCGCTaGGGCTCGTCTCGCCCCTCGCTGAGCACAGAGGGGCTCGGGCTC +
Preference number: 5 (lower is better)
Translates to: SCRRILRSCSSSSCR*GSSRPSLSTEGLGL
Trigger: GAGCCCGAGCCCCTCTGTGCTCAGCGAGGGGCGAGACGAGCCCCAGCGGCAGCTGGACGATGAGCAGGAGCGGAGGATCCGCCTGCAGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000615869.4
CDS GCA 90 bp CCCTTCCCGAGTCGGGGCTGGAGGAGCTCGCTGCGAGCTGCCGGCTaGCACCAGCACATCGCGGCTTTCCTCTTCCAGCCCCTCGTCCGA +
Preference number: 5 (lower is better)
Translates to: PFPSRGWRSSLRAAG*HQHIAAFLFQPLVR
Trigger: TCGGACGAGGGGCTGGAAGAGGAAAGCCGCGATGTGCTGGTGGCAGCCGGCAGCTCGCAGCGAGCTCCTCCAGCCCCGACTCGGGAAGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000615869.4
CDS CCA 90 bp GAGCCCGCCGGCAGAGGCGGAGCCGCCCGAGCGCCCGGACGCAGGTaGGGAACCTGTGGCGCCTACAACAAGCAACACGTGGAATTGAAT +
Preference number: 5 (lower is better)
Translates to: EPAGRGGAARAPGRR*GTCGAYNKQHVELN
Trigger: ATTCAATTCCACGTGTTGCTTGTTGTAGGCGCCACAGGTTCCCCACCTGCGTCCGGGCGCTCGGGCGGCTCCGCCTCTGCCGGCGGGCTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000615869.4
CDS CCA 90 bp GGAGCCGCGGGGCTGGCTGCAGCGGCCGCAGAACGAAAGGAAAACTaGCCAGGGCTTTCCGGACACGTCGAGTTAGATTCAGGAGTGTTT +
Preference number: 5 (lower is better)
Translates to: GAAGLAAAAAERKEN*PGLSGHVELDSGVF
Trigger: AAACACTCCTGAATCTAACTCGACGTGTCCGGAAAGCCCTGGCCAGTTTTCCTTTCGTTCTGCGGCCGCTGCAGCCAGCCCCGCGGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000615869.4
CDS-3UTR CAA 90 bp GAATATGGTATCTTGACGGAAGCACACTTGCTACCCCACACCTGGGGATTACTTTGGGCGCCTCAGGAATaGCTCCGCCAGCCCCGGGCG +
Preference number: 5 (lower is better)
Translates to: EYGILTEAHLLPHTWGLLWAPQE*LRQPRA
Trigger: CGCCCGGGGCTGGCGGAGCAATTCCTGAGGCGCCCA...AAGTAATCCCCAGGTGTGGGGTAGCAAGTGTGCTTCCGTCAAGATACCATATTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000615869.4
CDS-3UTR CAA 90 bp TGCCATTGGAGAGTTTGGGATAGCATGACTGGACATTTGAGGGTTTGGAGAAAATGGGCGCCTCAGGAATaGCTCCGCCAGCCCCGGGCG +
Preference number: 5 (lower is better)
Translates to: CHWRVWDSMTGHLRVWRKWAPQE*LRQPRA
Trigger: CGCCCGGGGCTGGCGGAGCAATTCCTGAGGCGCCCA...TTTTCTCCAAACCCTCAAATGTCCAGTCATGCTATCCCAAACTCTCCAATGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000615869.4
CDS-3UTR CAA 90 bp TTACTAAGTACAGAGCAATGTGTCGTGGAACAGCAAGCTTGGGGATGGTGCCATGCGTTGGGGGTGAGCTaGGGCGCCTCAGGAATTGCT +
Preference number: 5 (lower is better)
Translates to: LLSTEQCVVEQQAWGWCHALGVS*GASGIA
Trigger: AGCAATTCCTGAGGCGCCCAAGCTCACCCCCAACGC...ATGGCACCATCCCCAAGCTTGCTGTTCCACGACACATTGCTCTGTACTTAGTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000615869.4
CDS-3UTR CAA 90 bp TCATGTTCTGATCACAAGCAGAGCCAAGGTTCATTTTTAGGTCAAACTACACAATGGGCGCCTCAGGAATaGCTCCGCCAGCCCCGGGCG +
Preference number: 5 (lower is better)
Translates to: SCSDHKQSQGSFLGQTTQWAPQE*LRQPRA
Trigger: CGCCCGGGGCTGGCGGAGCAATTCCTGAGGCGCCCA...TTGTGTAGTTTGACCTAAAAATGAACCTTGGCTCTGCTTGTGATCAGAACATGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000615869.4
CDS-3UTR CAA 90 bp TTACTAAGTACAGAGCAATGTGTCGTGGAACAGCAAGCTTGGGGATGGTGCCATCGTGGAACAGCAAGCTaGGGGATGGTGCCATTGGAG +
Preference number: 5 (lower is better)
Translates to: LLSTEQCVVEQQAWGWCHRGTAS*GMVPLE
Trigger: CTCCAATGGCACCATCCCCAAGCTTGCTGTTCCACG...ATGGCACCATCCCCAAGCTTGCTGTTCCACGACACATTGCTCTGTACTTAGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CAA 90 bp GAATATGGTATCTTGACGGAAGCACACTTGCTACCCCACACCTGGGGATTACTTGGTGGTGAAATCTCCTaGAGTCCCCCATTGTGGCCT +
Preference number: 5 (lower is better)
Translates to: EYGILTEAHLLPHTWGLLGGEIS*SPPLWP
Trigger: AGGCCACAATGGGGGACTCAAGGAGATTTCACCACC...AAGTAATCCCCAGGTGTGGGGTAGCAAGTGTGCTTCCGTCAAGATACCATATTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CAA 90 bp CATTTTAACAAGGATACGACAGTGTTGGTGCAGTGGTCCGAACTGACTTCTCACTTGACGGAAGCACACTaGCTACCCCACACCTGGGGA +
Preference number: 5 (lower is better)
Translates to: HFNKDTTVLVQWSELTSHLTEAH*LPHTWG
Trigger: TCCCCAGGTGTGGGGTAGCAAGTGTGCTTCCGTCAA...GTGAGAAGTCAGTTCGGACCACTGCACCAACACTGTCGTATCCTTGTTAAAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR CAA 90 bp TTACTAAGTACAGAGCAATGTGTCGTGGAACAGCAAGCTTGGGGATGGTGCCATATGGTACTGTTGCTCTaGTCCTCCATCCAGGGCACA +
Preference number: 5 (lower is better)
Translates to: LLSTEQCVVEQQAWGWCHMVLLL*SSIQGT
Trigger: TGTGCCCTGGATGGAGGACAAGAGCAACAGTACCAT...ATGGCACCATCCCCAAGCTTGCTGTTCCACGACACATTGCTCTGTACTTAGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CAA 90 bp TTACTAAGTACAGAGCAATGTGTCGTGGAACAGCAAGCTTGGGGATGGTGCCATAAGGATACGACAGTGTaGGTGCAGTGGTCCGAACTG +
Preference number: 5 (lower is better)
Translates to: LLSTEQCVVEQQAWGWCHKDTTV*VQWSEL
Trigger: CAGTTCGGACCACTGCACCAACACTGTCGTATCCTT...ATGGCACCATCCCCAAGCTTGCTGTTCCACGACACATTGCTCTGTACTTAGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS GCA 90 bp GAGCTCTGCCAGATGAAGAATCTCTTCCAGCTTTCTAGCAGGAGATaGCTGGTTCATGGTCTCTGTTTCCTTTTCTGCTGGGCCTTCTAT +
Preference number: 5 (lower is better)
Translates to: ELCQMKNLFQLSSRR*LVHGLCFLFCWAFY
Trigger: ATAGAAGGCCCAGCAGAAAAGGAAACAGAGACCATGAACCAGGCATCTCCTGCTAGAAAGCTGGAAGAGATTCTTCATCTGGCAGAGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313070.11
ENST00000462699.5
ENST00000615869.4
CDS-3UTR CAA 90 bp TCATGTTCTGATCACAAGCAGAGCCAAGGTTCATTTTTAGGTCAAACTACACAAGCGTTGGGGGTGAGCTaGGGCGCCTCAGGAATTGCT +
Preference number: 5 (lower is better)
Translates to: SCSDHKQSQGSFLGQTTQALGVS*GASGIA
Trigger: AGCAATTCCTGAGGCGCCCAAGCTCACCCCCAACGC...TTGTGTAGTTTGACCTAAAAATGAACCTTGGCTCTGCTTGTGATCAGAACATGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000615869.4
CDS-3UTR CAA 90 bp CATTTTAACAAGGATACGACAGTGTTGGTGCAGTGGTCCGAACTGACTTCTCACGTGAAGAGTTTCACTTaGACCACAGGCCGAGGATGG +
Preference number: 5 (lower is better)
Translates to: HFNKDTTVLVQWSELTSHVKSFT*TTGRGW
Trigger: CCATCCTCGGCCTGTGGTCAAAGTGAAACTCTTCAC...GTGAGAAGTCAGTTCGGACCACTGCACCAACACTGTCGTATCCTTGTTAAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CAA 90 bp TGTTATACTGGAGCAGGAGAATATGGTATCTTGACGGAAGCACACTTGCTACCCCTGTTGGCGATATTCTaGACAGGCTGCCATGTCTCC +
Preference number: 5 (lower is better)
Translates to: CYTGAGEYGILTEAHLLPLLAIF*TGCHVS
Trigger: GGAGACATGGCAGCCTGTCAAGAATATCGCCAACAG...GGGTAGCAAGTGTGCTTCCGTCAAGATACCATATTCTCCTGCTCCAGTATAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR CAA 90 bp GACAGTGTTGGTGCAGTGGTCCGAACTGACTTCTCACAATGCTGCATTATGAGATCCAGGGCACAGAGTTaGGTGCTTTGCTTTTTGGCA +
Preference number: 5 (lower is better)
Translates to: DSVGAVVRTDFSQCCIMRSRAQS*VLCFLA
Trigger: TGCCAAAAAGCAAAGCACCAAACTCTGTGCCCTGGA...TCTCATAATGCAGCATTGTGAGAAGTCAGTTCGGACCACTGCACCAACACTGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR CAA 90 bp GGTGCAGTGGTCCGAACTGACTTCTCACAATGCTGCATTATGAGAAATATGTATTTGACGGAAGCACACTaGCTACCCCACACCTGGGGA +
Preference number: 5 (lower is better)
Translates to: GAVVRTDFSQCCIMRNMYLTEAH*LPHTWG
Trigger: TCCCCAGGTGTGGGGTAGCAAGTGTGCTTCCGTCAA...ATACATATTTCTCATAATGCAGCATTGTGAGAAGTCAGTTCGGACCACTGCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR CAA 90 bp GGTGCAGTGGTCCGAACTGACTTCTCACAATGCTGCATTATGAGAAATATGTATCGTGGAACAGCAAGCTaGGGGATGGTGCCATTGGAG +
Preference number: 5 (lower is better)
Translates to: GAVVRTDFSQCCIMRNMYRGTAS*GMVPLE
Trigger: CTCCAATGGCACCATCCCCAAGCTTGCTGTTCCACG...ATACATATTTCTCATAATGCAGCATTGTGAGAAGTCAGTTCGGACCACTGCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS TCA 90 bp CCTGCTCAAAACCTCTGTGAATTGACTGGGCGATGGAAGACTCCATaGGATCCACATAGCGGACAACCAAGGGTACAAAGATTTCTTGCA +
Preference number: 5 (lower is better)
Translates to: PAQNLCELTGRWKTP*DPHSGQPRVQRFLA
Trigger: TGCAAGAAATCTTTGTACCCTTGGTTGTCCGCTATGTGGATCTCATGGAGTCTTCCATCGCCCAGTCAATTCACAGAGGTTTTGAGCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000397721.4
ENST00000412584.6
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR CAA 90 bp TTACTAAGTACAGAGCAATGTGTCGTGGAACAGCAAGCTTGGGGATGGTGCCATCATTTTATCTGCCAATaGCAGCCGGCCATCAAGTTC +
Preference number: 5 (lower is better)
Translates to: LLSTEQCVVEQQAWGWCHHFICQ*QPAIKF
Trigger: GAACTTGATGGCCGGCTGCAATTGGCAGATAAAATG...ATGGCACCATCCCCAAGCTTGCTGTTCCACGACACATTGCTCTGTACTTAGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CAA 90 bp GACAGTGTTGGTGCAGTGGTCCGAACTGACTTCTCACAATGCTGCATTATGAGACATTTTATCTGCCAATaGCAGCCGGCCATCAAGTTC +
Preference number: 5 (lower is better)
Translates to: DSVGAVVRTDFSQCCIMRHFICQ*QPAIKF
Trigger: GAACTTGATGGCCGGCTGCAATTGGCAGATAAAATG...TCTCATAATGCAGCATTGTGAGAAGTCAGTTCGGACCACTGCACCAACACTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CAA 90 bp GAATATGGTATCTTGACGGAAGCACACTTGCTACCCCACACCTGGGGATTACTTGTACCACGTCGGACTTaGACAGCTGAATCTCATTCT +
Preference number: 5 (lower is better)
Translates to: EYGILTEAHLLPHTWGLLVPRRT*TAESHS
Trigger: AGAATGAGATTCAGCTGTCAAAGTCCGACGTGGTAC...AAGTAATCCCCAGGTGTGGGGTAGCAAGTGTGCTTCCGTCAAGATACCATATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CAA 90 bp GGTGCAGTGGTCCGAACTGACTTCTCACAATGCTGCATTATGAGAAATATGTATGGTGGTGAAATCTCCTaGAGTCCCCCATTGTGGCCT +
Preference number: 5 (lower is better)
Translates to: GAVVRTDFSQCCIMRNMYGGEIS*SPPLWP
Trigger: AGGCCACAATGGGGGACTCAAGGAGATTTCACCACC...ATACATATTTCTCATAATGCAGCATTGTGAGAAGTCAGTTCGGACCACTGCACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CAA 90 bp TGCCATTGGAGAGTTTGGGATAGCATGACTGGACATTTGAGGGTTTGGAGAAAAGTGAAGAGTTTCACTTaGACCACAGGCCGAGGATGG +
Preference number: 5 (lower is better)
Translates to: CHWRVWDSMTGHLRVWRKVKSFT*TTGRGW
Trigger: CCATCCTCGGCCTGTGGTCAAAGTGAAACTCTTCAC...TTTTCTCCAAACCCTCAAATGTCCAGTCATGCTATCCCAAACTCTCCAATGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CAA 90 bp TGCCATTGGAGAGTTTGGGATAGCATGACTGGACATTTGAGGGTTTGGAGAAAACTGTTGGCGATATTCTaGACAGGCTGCCATGTCTCC +
Preference number: 5 (lower is better)
Translates to: CHWRVWDSMTGHLRVWRKLLAIF*TGCHVS
Trigger: GGAGACATGGCAGCCTGTCAAGAATATCGCCAACAG...TTTTCTCCAAACCCTCAAATGTCCAGTCATGCTATCCCAAACTCTCCAATGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CAA 90 bp TTACTAAGTACAGAGCAATGTGTCGTGGAACAGCAAGCTTGGGGATGGTGCCATAAAGGTCTTCTGATGTaGCTGAGCCATTGGTGGACT +
Preference number: 5 (lower is better)
Translates to: LLSTEQCVVEQQAWGWCHKGLLM*LSHWWT
Trigger: AGTCCACCAATGGCTCAGCAACATCAGAAGACCTTT...ATGGCACCATCCCCAAGCTTGCTGTTCCACGACACATTGCTCTGTACTTAGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CAA 90 bp GAATATGGTATCTTGACGGAAGCACACTTGCTACCCCACACCTGGGGATTACTTAACTGCAACTGTTGTTaGTTAAGCTTCTGCTGCCTC +
Preference number: 5 (lower is better)
Translates to: EYGILTEAHLLPHTWGLLNCNCC*LSFCCL
Trigger: GAGGCAGCAGAAGCTTAACAAACAACAGTTGCAGTT...AAGTAATCCCCAGGTGTGGGGTAGCAAGTGTGCTTCCGTCAAGATACCATATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CAA 90 bp TGTTATACTGGAGCAGGAGAATATGGTATCTTGACGGAAGCACACTTGCTACCCCATTTTATCTGCCAATaGCAGCCGGCCATCAAGTTC +
Preference number: 5 (lower is better)
Translates to: CYTGAGEYGILTEAHLLPHFICQ*QPAIKF
Trigger: GAACTTGATGGCCGGCTGCAATTGGCAGATAAAATG...GGGTAGCAAGTGTGCTTCCGTCAAGATACCATATTCTCCTGCTCCAGTATAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CAA 90 bp GGTGCAGTGGTCCGAACTGACTTCTCACAATGCTGCATTATGAGAAATATGTATGTGAAGAGTTTCACTTaGACCACAGGCCGAGGATGG +
Preference number: 5 (lower is better)
Translates to: GAVVRTDFSQCCIMRNMYVKSFT*TTGRGW
Trigger: CCATCCTCGGCCTGTGGTCAAAGTGAAACTCTTCAC...ATACATATTTCTCATAATGCAGCATTGTGAGAAGTCAGTTCGGACCACTGCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CAA 90 bp GAAGGAAGAAATTTCCTTGTTTGTTATCTTAGCCCTAGGGCCCAGAAAATGAGCCTGTTGGCGATATTCTaGACAGGCTGCCATGTCTCC +
Preference number: 5 (lower is better)
Translates to: EGRNFLVCYLSPRAQKMSLLAIF*TGCHVS
Trigger: GGAGACATGGCAGCCTGTCAAGAATATCGCCAACAG...GCTCATTTTCTGGGCCCTAGGGCTAAGATAACAAACAAGGAAATTTCTTCCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CAA 90 bp CATTTTAACAAGGATACGACAGTGTTGGTGCAGTGGTCCGAACTGACTTCTCACACATTGGGAAGACTGTaGGCGATATTCTTGACAGGC +
Preference number: 5 (lower is better)
Translates to: HFNKDTTVLVQWSELTSHTLGRL*AIFLTG
Trigger: GCCTGTCAAGAATATCGCCAACAGTCTTCCCAATGT...GTGAGAAGTCAGTTCGGACCACTGCACCAACACTGTCGTATCCTTGTTAAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR CAA 90 bp GACAGTGTTGGTGCAGTGGTCCGAACTGACTTCTCACAATGCTGCATTATGAGATTTGGAAGAGCTACATaGGGAAGACTGTTGGCGATA +
Preference number: 5 (lower is better)
Translates to: DSVGAVVRTDFSQCCIMRFGRAT*GRLLAI
Trigger: TATCGCCAACAGTCTTCCCAATGTAGCTCTTCCAAA...TCTCATAATGCAGCATTGTGAGAAGTCAGTTCGGACCACTGCACCAACACTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR CAA 90 bp CATTTTAACAAGGATACGACAGTGTTGGTGCAGTGGTCCGAACTGACTTCTCACAAAGGTCTTCTGATGTaGCTGAGCCATTGGTGGACT +
Preference number: 5 (lower is better)
Translates to: HFNKDTTVLVQWSELTSHKGLLM*LSHWWT
Trigger: AGTCCACCAATGGCTCAGCAACATCAGAAGACCTTT...GTGAGAAGTCAGTTCGGACCACTGCACCAACACTGTCGTATCCTTGTTAAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR CAA 90 bp ATATGGTATCTTGACGGAAGCACACTTGCTACCCCACACCTGGGGATTACTTATAAAGGTCTTCTGATGTaGCTGAGCCATTGGTGGACT +
Preference number: 5 (lower is better)
Translates to: IWYLDGSTLATPHLGITYKGLLM*LSHWWT
Trigger: AGTCCACCAATGGCTCAGCAACATCAGAAGACCTTT...ATAAGTAATCCCCAGGTGTGGGGTAGCAAGTGTGCTTCCGTCAAGATACCATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR CAA 90 bp TTACTAAGTACAGAGCAATGTGTCGTGGAACAGCAAGCTTGGGGATGGTGCCATGCAGTTCTTGTTCTTTaGACACAGGCCTCTAGCATA +
Preference number: 5 (lower is better)
Translates to: LLSTEQCVVEQQAWGWCHAVLVL*TQASSI
Trigger: TATGCTAGAGGCCTGTGTCAAAAGAACAAGAACTGC...ATGGCACCATCCCCAAGCTTGCTGTTCCACGACACATTGCTCTGTACTTAGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CAA 90 bp GAATATGGTATCTTGACGGAAGCACACTTGCTACCCCACACCTGGGGATTACTTCGCAAGTCAGTTGTTTaGCTTGCCTTTTGTAGCTTG +
Preference number: 5 (lower is better)
Translates to: EYGILTEAHLLPHTWGLLRKSVV*LAFCSL
Trigger: CAAGCTACAAAAGGCAAGCAAAACAACTGACTTGCG...AAGTAATCCCCAGGTGTGGGGTAGCAAGTGTGCTTCCGTCAAGATACCATATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR CAA 90 bp GAAGGAAGAAATTTCCTTGTTTGTTATCTTAGCCCTAGGGCCCAGAAAATGAGCATGGTACTGTTGCTCTaGTCCTCCATCCAGGGCACA +
Preference number: 5 (lower is better)
Translates to: EGRNFLVCYLSPRAQKMSMVLLL*SSIQGT
Trigger: TGTGCCCTGGATGGAGGACAAGAGCAACAGTACCAT...GCTCATTTTCTGGGCCCTAGGGCTAAGATAACAAACAAGGAAATTTCTTCCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CAA 90 bp GGTGCAGTGGTCCGAACTGACTTCTCACAATGCTGCATTATGAGAAATATGTATATGGTACTGTTGCTCTaGTCCTCCATCCAGGGCACA +
Preference number: 5 (lower is better)
Translates to: GAVVRTDFSQCCIMRNMYMVLLL*SSIQGT
Trigger: TGTGCCCTGGATGGAGGACAAGAGCAACAGTACCAT...ATACATATTTCTCATAATGCAGCATTGTGAGAAGTCAGTTCGGACCACTGCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR CAA 90 bp GGTGCAGTGGTCCGAACTGACTTCTCACAATGCTGCATTATGAGAAATATGTATAAGGATACGACAGTGTaGGTGCAGTGGTCCGAACTG +
Preference number: 5 (lower is better)
Translates to: GAVVRTDFSQCCIMRNMYKDTTV*VQWSEL
Trigger: CAGTTCGGACCACTGCACCAACACTGTCGTATCCTT...ATACATATTTCTCATAATGCAGCATTGTGAGAAGTCAGTTCGGACCACTGCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR CAA 90 bp GAATATGGTATCTTGACGGAAGCACACTTGCTACCCCACACCTGGGGATTACTTGGAGAATATGGTATCTaGACGGAAGCACACTTGCTA +
Preference number: 5 (lower is better)
Translates to: EYGILTEAHLLPHTWGLLGEYGI*TEAHLL
Trigger: TAGCAAGTGTGCTTCCGTCAAGATACCATATTCTCC...AAGTAATCCCCAGGTGTGGGGTAGCAAGTGTGCTTCCGTCAAGATACCATATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR CAA 90 bp TCATGTTCTGATCACAAGCAGAGCCAAGGTTCATTTTTAGGTCAAACTACACAACGTGGAACAGCAAGCTaGGGGATGGTGCCATTGGAG +
Preference number: 5 (lower is better)
Translates to: SCSDHKQSQGSFLGQTTQRGTAS*GMVPLE
Trigger: CTCCAATGGCACCATCCCCAAGCTTGCTGTTCCACG...TTGTGTAGTTTGACCTAAAAATGAACCTTGGCTCTGCTTGTGATCAGAACATGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CAA 90 bp GAATATGGTATCTTGACGGAAGCACACTTGCTACCCCACACCTGGGGATTACTTATTCTATTTGGCTGTTaGCACAAGTCCTCTTCACCT +
Preference number: 5 (lower is better)
Translates to: EYGILTEAHLLPHTWGLLILFGC*HKSSSP
Trigger: AGGTGAAGAGGACTTGTGCAAACAGCCAAATAGAAT...AAGTAATCCCCAGGTGTGGGGTAGCAAGTGTGCTTCCGTCAAGATACCATATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CAA 90 bp CATTTTAACAAGGATACGACAGTGTTGGTGCAGTGGTCCGAACTGACTTCTCACTTAGGGCCATTCTATTaGGCTGTTTGCACAAGTCCT +
Preference number: 5 (lower is better)
Translates to: HFNKDTTVLVQWSELTSHLGPFY*AVCTSP
Trigger: AGGACTTGTGCAAACAGCCAAATAGAATGGCCCTAA...GTGAGAAGTCAGTTCGGACCACTGCACCAACACTGTCGTATCCTTGTTAAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CAA 90 bp GTTGGTGCAGTGGTCCGAACTGACTTCTCACAATGCTGCATTATGAGAAATATGCATTTTATCTGCCAATaGCAGCCGGCCATCAAGTTC +
Preference number: 5 (lower is better)
Translates to: VGAVVRTDFSQCCIMRNMHFICQ*QPAIKF
Trigger: GAACTTGATGGCCGGCTGCAATTGGCAGATAAAATG...CATATTTCTCATAATGCAGCATTGTGAGAAGTCAGTTCGGACCACTGCACCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CAA 90 bp TCATGTTCTGATCACAAGCAGAGCCAAGGTTCATTTTTAGGTCAAACTACACAAGGTGGTGAAATCTCCTaGAGTCCCCCATTGTGGCCT +
Preference number: 5 (lower is better)
Translates to: SCSDHKQSQGSFLGQTTQGGEIS*SPPLWP
Trigger: AGGCCACAATGGGGGACTCAAGGAGATTTCACCACC...TTGTGTAGTTTGACCTAAAAATGAACCTTGGCTCTGCTTGTGATCAGAACATGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CAA 90 bp CATTTTAACAAGGATACGACAGTGTTGGTGCAGTGGTCCGAACTGACTTCTCACGCTGGGCCTTCTATTTaGGCATATTCTGTGAGTCTA +
Preference number: 5 (lower is better)
Translates to: HFNKDTTVLVQWSELTSHAGPSI*AYSVSL
Trigger: TAGACTCACAGAATATGCCAAAATAGAAGGCCCAGC...GTGAGAAGTCAGTTCGGACCACTGCACCAACACTGTCGTATCCTTGTTAAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313070.11
ENST00000462699.5
ENST00000615869.4
CDS-3UTR CAA 90 bp TGCCATTGGAGAGTTTGGGATAGCATGACTGGACATTTGAGGGTTTGGAGAAAACAAAACCTCTGTGAATaGACTGGGCGATGGAAGACT +
Preference number: 5 (lower is better)
Translates to: CHWRVWDSMTGHLRVWRKQNLCE*TGRWKT
Trigger: AGTCTTCCATCGCCCAGTCAATTCACAGAGGTTTTG...TTTTCTCCAAACCCTCAAATGTCCAGTCATGCTATCCCAAACTCTCCAATGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CAA 90 bp GTTGGTGCAGTGGTCCGAACTGACTTCTCACAATGCTGCATTATGAGAAATATGACATTGGGAAGACTGTaGGCGATATTCTTGACAGGC +
Preference number: 5 (lower is better)
Translates to: VGAVVRTDFSQCCIMRNMTLGRL*AIFLTG
Trigger: GCCTGTCAAGAATATCGCCAACAGTCTTCCCAATGT...CATATTTCTCATAATGCAGCATTGTGAGAAGTCAGTTCGGACCACTGCACCAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR CAA 90 bp TGTTATACTGGAGCAGGAGAATATGGTATCTTGACGGAAGCACACTTGCTACCCGCAGACTTGGAACTTTaGGAAGAGCTACATTGGGAA +
Preference number: 5 (lower is better)
Translates to: CYTGAGEYGILTEAHLLPADLEL*EELHWE
Trigger: TTCCCAATGTAGCTCTTCCAAAAGTTCCAAGTCTGC...GGGTAGCAAGTGTGCTTCCGTCAAGATACCATATTCTCCTGCTCCAGTATAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR CAA 90 bp CATTTTAACAAGGATACGACAGTGTTGGTGCAGTGGTCCGAACTGACTTCTCACGCAGTTCTTGTTCTTTaGACACAGGCCTCTAGCATA +
Preference number: 5 (lower is better)
Translates to: HFNKDTTVLVQWSELTSHAVLVL*TQASSI
Trigger: TATGCTAGAGGCCTGTGTCAAAAGAACAAGAACTGC...GTGAGAAGTCAGTTCGGACCACTGCACCAACACTGTCGTATCCTTGTTAAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR CAA 90 bp TGTTATACTGGAGCAGGAGAATATGGTATCTTGACGGAAGCACACTTGCTACCCCGCAAGTCAGTTGTTTaGCTTGCCTTTTGTAGCTTG +
Preference number: 5 (lower is better)
Translates to: CYTGAGEYGILTEAHLLPRKSVV*LAFCSL
Trigger: CAAGCTACAAAAGGCAAGCAAAACAACTGACTTGCG...GGGTAGCAAGTGTGCTTCCGTCAAGATACCATATTCTCCTGCTCCAGTATAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR CAA 90 bp GACAGTGTTGGTGCAGTGGTCCGAACTGACTTCTCACAATGCTGCATTATGAGAGAATGCGCAAGTCAGTaGTTTTGCTTGCCTTTTGTA +
Preference number: 5 (lower is better)
Translates to: DSVGAVVRTDFSQCCIMRECASQ*FCLPFV
Trigger: TACAAAAGGCAAGCAAAACAACTGACTTGCGCATTC...TCTCATAATGCAGCATTGTGAGAAGTCAGTTCGGACCACTGCACCAACACTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR CAA 90 bp GGTGCAGTGGTCCGAACTGACTTCTCACAATGCTGCATTATGAGAAATATGTATTCCAGGGCACAGAGTTaGGTGCTTTGCTTTTTGGCA +
Preference number: 5 (lower is better)
Translates to: GAVVRTDFSQCCIMRNMYSRAQS*VLCFLA
Trigger: TGCCAAAAAGCAAAGCACCAAACTCTGTGCCCTGGA...ATACATATTTCTCATAATGCAGCATTGTGAGAAGTCAGTTCGGACCACTGCACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR CAA 90 bp GAAGGAAGAAATTTCCTTGTTTGTTATCTTAGCCCTAGGGCCCAGAAAATGAGCTCCAGGGCACAGAGTTaGGTGCTTTGCTTTTTGGCA +
Preference number: 5 (lower is better)
Translates to: EGRNFLVCYLSPRAQKMSSRAQS*VLCFLA
Trigger: TGCCAAAAAGCAAAGCACCAAACTCTGTGCCCTGGA...GCTCATTTTCTGGGCCCTAGGGCTAAGATAACAAACAAGGAAATTTCTTCCTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CAA 90 bp GACAGTGTTGGTGCAGTGGTCCGAACTGACTTCTCACAATGCTGCATTATGAGAAGTCTATATTTGGGTTaGGCAATCCTTTCATCCCAG +
Preference number: 5 (lower is better)
Translates to: DSVGAVVRTDFSQCCIMRSLYLG*AILSSQ
Trigger: CTGGGATGAAAGGATTGCCAAACCCAAATATAGACT...TCTCATAATGCAGCATTGTGAGAAGTCAGTTCGGACCACTGCACCAACACTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR CAA 90 bp ACTGACTTCTCACAATGCTGCATTATGAGAAATATGTATCTCGCTTTACACAGATTGACGGAAGCACACTaGCTACCCCACACCTGGGGA +
Preference number: 5 (lower is better)
Translates to: TDFSQCCIMRNMYLALHRLTEAH*LPHTWG
Trigger: TCCCCAGGTGTGGGGTAGCAAGTGTGCTTCCGTCAA...TCTGTGTAAAGCGAGATACATATTTCTCATAATGCAGCATTGTGAGAAGTCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS CCA 90 bp GCTGTTTGCACAAGTCCTCTTCACCTCTGTAAATGGCATCATATTTaGCTATCCATGAGCTCAACACTGTCTCTTTGCTCAAGCCATCTA +
Preference number: 5 (lower is better)
Translates to: AVCTSPLHLCKWHHI*LSMSSTLSLCSSHL
Trigger: TAGATGGCTTGAGCAAAGAGACAGTGTTGAGCTCATGGATAGCCAAATATGATGCCATTTACAGAGGTGAAGAGGACTTGTGCAAACAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CAA 90 bp CATTTTAACAAGGATACGACAGTGTTGGTGCAGTGGTCCGAACTGACTTCTCACCTCAACACTGTCTCTTaGCTCAAGCCATCTATTTCT +
Preference number: 5 (lower is better)
Translates to: HFNKDTTVLVQWSELTSHLNTVS*LKPSIS
Trigger: AGAAATAGATGGCTTGAGCAAAGAGACAGTGTTGAG...GTGAGAAGTCAGTTCGGACCACTGCACCAACACTGTCGTATCCTTGTTAAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CAA 90 bp ATATGGTATCTTGACGGAAGCACACTTGCTACCCCACACCTGGGGATTACTTATATTCTATTTGGCTGTTaGCACAAGTCCTCTTCACCT +
Preference number: 5 (lower is better)
Translates to: IWYLDGSTLATPHLGITYILFGC*HKSSSP
Trigger: AGGTGAAGAGGACTTGTGCAAACAGCCAAATAGAAT...ATAAGTAATCCCCAGGTGTGGGGTAGCAAGTGTGCTTCCGTCAAGATACCATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CAA 90 bp GTTGGTGCAGTGGTCCGAACTGACTTCTCACAATGCTGCATTATGAGAAATATGTTAGGGCCATTCTATTaGGCTGTTTGCACAAGTCCT +
Preference number: 5 (lower is better)
Translates to: VGAVVRTDFSQCCIMRNMLGPFY*AVCTSP
Trigger: AGGACTTGTGCAAACAGCCAAATAGAATGGCCCTAA...CATATTTCTCATAATGCAGCATTGTGAGAAGTCAGTTCGGACCACTGCACCAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CAA 90 bp TTACTAAGTACAGAGCAATGTGTCGTGGAACAGCAAGCTTGGGGATGGTGCCATGGAAGACTTTCCAAATaGGCCATTAGCAAATTCACT +
Preference number: 5 (lower is better)
Translates to: LLSTEQCVVEQQAWGWCHGRLSK*AISKFT
Trigger: AGTGAATTTGCTAATGGCCAATTTGGAAAGTCTTCC...ATGGCACCATCCCCAAGCTTGCTGTTCCACGACACATTGCTCTGTACTTAGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CAA 90 bp GGTGCAGTGGTCCGAACTGACTTCTCACAATGCTGCATTATGAGAAATATGTATGTACCACGTCGGACTTaGACAGCTGAATCTCATTCT +
Preference number: 5 (lower is better)
Translates to: GAVVRTDFSQCCIMRNMYVPRRT*TAESHS
Trigger: AGAATGAGATTCAGCTGTCAAAGTCCGACGTGGTAC...ATACATATTTCTCATAATGCAGCATTGTGAGAAGTCAGTTCGGACCACTGCACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CAA 90 bp GACAGTGTTGGTGCAGTGGTCCGAACTGACTTCTCACAATGCTGCATTATGAGATGTAATTCAGCTGATTaGGAGCTATTAGAAGTTGGG +
Preference number: 5 (lower is better)
Translates to: DSVGAVVRTDFSQCCIMRCNSAD*ELLEVG
Trigger: CCCAACTTCTAATAGCTCCAAATCAGCTGAATTACA...TCTCATAATGCAGCATTGTGAGAAGTCAGTTCGGACCACTGCACCAACACTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CAA 90 bp TTACTAAGTACAGAGCAATGTGTCGTGGAACAGCAAGCTTGGGGATGGTGCCATATTCGCACTGCCAGTTaGATTTTTAAGTCAGAATCC +
Preference number: 5 (lower is better)
Translates to: LLSTEQCVVEQQAWGWCHIRTAS*IFKSES
Trigger: GGATTCTGACTTAAAAATCAAACTGGCAGTGCGAAT...ATGGCACCATCCCCAAGCTTGCTGTTCCACGACACATTGCTCTGTACTTAGTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CAA 90 bp GAATATGGTATCTTGACGGAAGCACACTTGCTACCCCACACCTGGGGATTACTTGTTTCTGGGTTTGAATaGCAGGAACTGGTTTATATG +
Preference number: 5 (lower is better)
Translates to: EYGILTEAHLLPHTWGLLVSGFE*QELVYM
Trigger: CATATAAACCAGTTCCTGCAATTCAAACCCAGAAAC...AAGTAATCCCCAGGTGTGGGGTAGCAAGTGTGCTTCCGTCAAGATACCATATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CAA 90 bp GAAGGAAGAAATTTCCTTGTTTGTTATCTTAGCCCTAGGGCCCAGAAAATGAGCCAAAACCTCTGTGAATaGACTGGGCGATGGAAGACT +
Preference number: 5 (lower is better)
Translates to: EGRNFLVCYLSPRAQKMSQNLCE*TGRWKT
Trigger: AGTCTTCCATCGCCCAGTCAATTCACAGAGGTTTTG...GCTCATTTTCTGGGCCCTAGGGCTAAGATAACAAACAAGGAAATTTCTTCCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CAA 90 bp AGATTTTTATTGCCTGCAAGCTGTTATACTGGAGCAGGAGAATATGGTATCTTGCTGTTGGCGATATTCTaGACAGGCTGCCATGTCTCC +
Preference number: 5 (lower is better)
Translates to: RFLLPASCYTGAGEYGILLLAIF*TGCHVS
Trigger: GGAGACATGGCAGCCTGTCAAGAATATCGCCAACAG...CAAGATACCATATTCTCCTGCTCCAGTATAACAGCTTGCAGGCAATAAAAATCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR CAA 90 bp TGCCATTGGAGAGTTTGGGATAGCATGACTGGACATTTGAGGGTTTGGAGAAAAGCAGTTCTTGTTCTTTaGACACAGGCCTCTAGCATA +
Preference number: 5 (lower is better)
Translates to: CHWRVWDSMTGHLRVWRKAVLVL*TQASSI
Trigger: TATGCTAGAGGCCTGTGTCAAAAGAACAAGAACTGC...TTTTCTCCAAACCCTCAAATGTCCAGTCATGCTATCCCAAACTCTCCAATGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CAA 90 bp ATATGGTATCTTGACGGAAGCACACTTGCTACCCCACACCTGGGGATTACTTATGAATGCGCAAGTCAGTaGTTTTGCTTGCCTTTTGTA +
Preference number: 5 (lower is better)
Translates to: IWYLDGSTLATPHLGITYECASQ*FCLPFV
Trigger: TACAAAAGGCAAGCAAAACAACTGACTTGCGCATTC...ATAAGTAATCCCCAGGTGTGGGGTAGCAAGTGTGCTTCCGTCAAGATACCATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR CAA 90 bp ATTTTTATTGCCTGCAAGCTGTTATACTGGAGCAGGAGAATATGGTATCTTGACATGGTACTGTTGCTCTaGTCCTCCATCCAGGGCACA +
Preference number: 5 (lower is better)
Translates to: IFIACKLLYWSRRIWYLDMVLLL*SSIQGT
Trigger: TGTGCCCTGGATGGAGGACAAGAGCAACAGTACCAT...GTCAAGATACCATATTCTCCTGCTCCAGTATAACAGCTTGCAGGCAATAAAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR CAA 90 bp TCATGTTCTGATCACAAGCAGAGCCAAGGTTCATTTTTAGGTCAAACTACACAAAAGGATACGACAGTGTaGGTGCAGTGGTCCGAACTG +
Preference number: 5 (lower is better)
Translates to: SCSDHKQSQGSFLGQTTQKDTTV*VQWSEL
Trigger: CAGTTCGGACCACTGCACCAACACTGTCGTATCCTT...TTGTGTAGTTTGACCTAAAAATGAACCTTGGCTCTGCTTGTGATCAGAACATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR CAA 90 bp ATTTTTATTGCCTGCAAGCTGTTATACTGGAGCAGGAGAATATGGTATCTTGACAAGGATACGACAGTGTaGGTGCAGTGGTCCGAACTG +
Preference number: 5 (lower is better)
Translates to: IFIACKLLYWSRRIWYLDKDTTV*VQWSEL
Trigger: CAGTTCGGACCACTGCACCAACACTGTCGTATCCTT...GTCAAGATACCATATTCTCCTGCTCCAGTATAACAGCTTGCAGGCAATAAAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR CAA 90 bp TGTTATACTGGAGCAGGAGAATATGGTATCTTGACGGAAGCACACTTGCTACCCAGTCTATATTTGGGTTaGGCAATCCTTTCATCCCAG +
Preference number: 5 (lower is better)
Translates to: CYTGAGEYGILTEAHLLPSLYLG*AILSSQ
Trigger: CTGGGATGAAAGGATTGCCAAACCCAAATATAGACT...GGGTAGCAAGTGTGCTTCCGTCAAGATACCATATTCTCCTGCTCCAGTATAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR CAA 90 bp TTGGATAATCTAGTCTATATTTGGGTTTGGCAATCCTTTCATCCCAGGAATATATTGACGGAAGCACACTaGCTACCCCACACCTGGGGA +
Preference number: 5 (lower is better)
Translates to: LDNLVYIWVWQSFHPRNILTEAH*LPHTWG
Trigger: TCCCCAGGTGTGGGGTAGCAAGTGTGCTTCCGTCAA...TATATTCCTGGGATGAAAGGATTGCCAAACCCAAATATAGACTAGATTATCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR CAA 90 bp GACTTCTCACAATGCTGCATTATGAGAAATATGTATCTCGCTTTACACAGAAAATTGACGGAAGCACACTaGCTACCCCACACCTGGGGA +
Preference number: 5 (lower is better)
Translates to: DFSQCCIMRNMYLALHRKLTEAH*LPHTWG
Trigger: TCCCCAGGTGTGGGGTAGCAAGTGTGCTTCCGTCAA...TTTTCTGTGTAAAGCGAGATACATATTTCTCATAATGCAGCATTGTGAGAAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR CAA 90 bp ACTGACTTCTCACAATGCTGCATTATGAGAAATATGTATCTCGCTTTACACAGAGTTGCTGAGCCATTGTaGACAGGCTGCCATGTCTCC +
Preference number: 5 (lower is better)
Translates to: TDFSQCCIMRNMYLALHRVAEPL*TGCHVS
Trigger: GGAGACATGGCAGCCTGTCAACAATGGCTCAGCAAC...TCTGTGTAAAGCGAGATACATATTTCTCATAATGCAGCATTGTGAGAAGTCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412584.6
CDS TCA 90 bp CAAGTCCTCTTCACCTCTGTAAATGGCATCATATTTGGCTATCCATaGGCTCAACACTGTCTCTTTGCTCAAGCCATCTATTTCTGGCAA +
Preference number: 5 (lower is better)
Translates to: QVLFTSVNGIIFGYP*AQHCLFAQAIYFWQ
Trigger: TTGCCAGAAATAGATGGCTTGAGCAAAGAGACAGTGTTGAGCTCATGGATAGCCAAATATGATGCCATTTACAGAGGTGAAGAGGACTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000615869.4
CDS CCA 90 bp CCATTCTATTTGGCTGTTTGCACAAGTCCTCTTCACCTCTGTAAATaGCATCATATTTGGCTATCCATGAGCTCAACACTGTCTCTTTGC +
Preference number: 5 (lower is better)
Translates to: PFYLAVCTSPLHLCK*HHIWLSMSSTLSLC
Trigger: GCAAAGAGACAGTGTTGAGCTCATGGATAGCCAAATATGATGCCATTTACAGAGGTGAAGAGGACTTGTGCAAACAGCCAAATAGAATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CAA 90 bp GGTGCAGTGGTCCGAACTGACTTCTCACAATGCTGCATTATGAGAAATATGTATAACTGCAACTGTTGTTaGTTAAGCTTCTGCTGCCTC +
Preference number: 5 (lower is better)
Translates to: GAVVRTDFSQCCIMRNMYNCNCC*LSFCCL
Trigger: GAGGCAGCAGAAGCTTAACAAACAACAGTTGCAGTT...ATACATATTTCTCATAATGCAGCATTGTGAGAAGTCAGTTCGGACCACTGCACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CAA 90 bp GTTGGTGCAGTGGTCCGAACTGACTTCTCACAATGCTGCATTATGAGAAATATGCTCAACACTGTCTCTTaGCTCAAGCCATCTATTTCT +
Preference number: 5 (lower is better)
Translates to: VGAVVRTDFSQCCIMRNMLNTVS*LKPSIS
Trigger: AGAAATAGATGGCTTGAGCAAAGAGACAGTGTTGAG...CATATTTCTCATAATGCAGCATTGTGAGAAGTCAGTTCGGACCACTGCACCAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CAA 90 bp GAAGGAAGAAATTTCCTTGTTTGTTATCTTAGCCCTAGGGCCCAGAAAATGAGCTTAGGGCCATTCTATTaGGCTGTTTGCACAAGTCCT +
Preference number: 5 (lower is better)
Translates to: EGRNFLVCYLSPRAQKMSLGPFY*AVCTSP
Trigger: AGGACTTGTGCAAACAGCCAAATAGAATGGCCCTAA...GCTCATTTTCTGGGCCCTAGGGCTAAGATAACAAACAAGGAAATTTCTTCCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CAA 90 bp ATATGGTATCTTGACGGAAGCACACTTGCTACCCCACACCTGGGGATTACTTATGGAAGACTTTCCAAATaGGCCATTAGCAAATTCACT +
Preference number: 5 (lower is better)
Translates to: IWYLDGSTLATPHLGITYGRLSK*AISKFT
Trigger: AGTGAATTTGCTAATGGCCAATTTGGAAAGTCTTCC...ATAAGTAATCCCCAGGTGTGGGGTAGCAAGTGTGCTTCCGTCAAGATACCATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CAA 90 bp TTGGATAATCTAGTCTATATTTGGGTTTGGCAATCCTTTCATCCCAGGAATATAGGTGGTGAAATCTCCTaGAGTCCCCCATTGTGGCCT +
Preference number: 5 (lower is better)
Translates to: LDNLVYIWVWQSFHPRNIGGEIS*SPPLWP
Trigger: AGGCCACAATGGGGGACTCAAGGAGATTTCACCACC...TATATTCCTGGGATGAAAGGATTGCCAAACCCAAATATAGACTAGATTATCCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CAA 90 bp GACTTCTCACAATGCTGCATTATGAGAAATATGTATCTCGCTTTACACAGAAAAGGTGGTGAAATCTCCTaGAGTCCCCCATTGTGGCCT +
Preference number: 5 (lower is better)
Translates to: DFSQCCIMRNMYLALHRKGGEIS*SPPLWP
Trigger: AGGCCACAATGGGGGACTCAAGGAGATTTCACCACC...TTTTCTGTGTAAAGCGAGATACATATTTCTCATAATGCAGCATTGTGAGAAGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CAA 90 bp ACTGACTTCTCACAATGCTGCATTATGAGAAATATGTATCTCGCTTTACACAGAGTGAAGAGTTTCACTTaGACCACAGGCCGAGGATGG +
Preference number: 5 (lower is better)
Translates to: TDFSQCCIMRNMYLALHRVKSFT*TTGRGW
Trigger: CCATCCTCGGCCTGTGGTCAAAGTGAAACTCTTCAC...TCTGTGTAAAGCGAGATACATATTTCTCATAATGCAGCATTGTGAGAAGTCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CAA 90 bp ATATGGTATCTTGACGGAAGCACACTTGCTACCCCACACCTGGGGATTACTTATTGTAATTCAGCTGATTaGGAGCTATTAGAAGTTGGG +
Preference number: 5 (lower is better)
Translates to: IWYLDGSTLATPHLGITYCNSAD*ELLEVG
Trigger: CCCAACTTCTAATAGCTCCAAATCAGCTGAATTACA...ATAAGTAATCCCCAGGTGTGGGGTAGCAAGTGTGCTTCCGTCAAGATACCATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CAA 90 bp CATTTTAACAAGGATACGACAGTGTTGGTGCAGTGGTCCGAACTGACTTCTCACTGTAATTCAGCTGATTaGGAGCTATTAGAAGTTGGG +
Preference number: 5 (lower is better)
Translates to: HFNKDTTVLVQWSELTSHCNSAD*ELLEVG
Trigger: CCCAACTTCTAATAGCTCCAAATCAGCTGAATTACA...GTGAGAAGTCAGTTCGGACCACTGCACCAACACTGTCGTATCCTTGTTAAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CAA 90 bp TGTTATACTGGAGCAGGAGAATATGGTATCTTGACGGAAGCACACTTGCTACCCATTCGCACTGCCAGTTaGATTTTTAAGTCAGAATCC +
Preference number: 5 (lower is better)
Translates to: CYTGAGEYGILTEAHLLPIRTAS*IFKSES
Trigger: GGATTCTGACTTAAAAATCAAACTGGCAGTGCGAAT...GGGTAGCAAGTGTGCTTCCGTCAAGATACCATATTCTCCTGCTCCAGTATAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CAA 90 bp TGTTATACTGGAGCAGGAGAATATGGTATCTTGACGGAAGCACACTTGCTACCCGTTTCTGGGTTTGAATaGCAGGAACTGGTTTATATG +
Preference number: 5 (lower is better)
Translates to: CYTGAGEYGILTEAHLLPVSGFE*QELVYM
Trigger: CATATAAACCAGTTCCTGCAATTCAAACCCAGAAAC...GGGTAGCAAGTGTGCTTCCGTCAAGATACCATATTCTCCTGCTCCAGTATAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CAA 90 bp ACTGACTTCTCACAATGCTGCATTATGAGAAATATGTATCTCGCTTTACACAGACTGTTGGCGATATTCTaGACAGGCTGCCATGTCTCC +
Preference number: 5 (lower is better)
Translates to: TDFSQCCIMRNMYLALHRLLAIF*TGCHVS
Trigger: GGAGACATGGCAGCCTGTCAAGAATATCGCCAACAG...TCTGTGTAAAGCGAGATACATATTTCTCATAATGCAGCATTGTGAGAAGTCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR CAA 90 bp GAAGGAAGAAATTTCCTTGTTTGTTATCTTAGCCCTAGGGCCCAGAAAATGAGCGCAGACTTGGAACTTTaGGAAGAGCTACATTGGGAA +
Preference number: 5 (lower is better)
Translates to: EGRNFLVCYLSPRAQKMSADLEL*EELHWE
Trigger: TTCCCAATGTAGCTCTTCCAAAAGTTCCAAGTCTGC...GCTCATTTTCTGGGCCCTAGGGCTAAGATAACAAACAAGGAAATTTCTTCCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CAA 90 bp GGTGCAGTGGTCCGAACTGACTTCTCACAATGCTGCATTATGAGAAATATGTATGCAGACTTGGAACTTTaGGAAGAGCTACATTGGGAA +
Preference number: 5 (lower is better)
Translates to: GAVVRTDFSQCCIMRNMYADLEL*EELHWE
Trigger: TTCCCAATGTAGCTCTTCCAAAAGTTCCAAGTCTGC...ATACATATTTCTCATAATGCAGCATTGTGAGAAGTCAGTTCGGACCACTGCACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR CAA 90 bp TTTTTATTGCCTGCAAGCTGTTATACTGGAGCAGGAGAATATGGTATCTTGACGAAAGGTCTTCTGATGTaGCTGAGCCATTGGTGGACT +
Preference number: 5 (lower is better)
Translates to: FLLPASCYTGAGEYGILTKGLLM*LSHWWT
Trigger: AGTCCACCAATGGCTCAGCAACATCAGAAGACCTTT...CGTCAAGATACCATATTCTCCTGCTCCAGTATAACAGCTTGCAGGCAATAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR CAA 90 bp TGTTATACTGGAGCAGGAGAATATGGTATCTTGACGGAAGCACACTTGCTACCCATCAAAGACAAACATTaGCAGTGCATCAAGCTTCCA +
Preference number: 5 (lower is better)
Translates to: CYTGAGEYGILTEAHLLPIKDKH*QCIKLP
Trigger: TGGAAGCTTGATGCACTGCAAATGTTTGTCTTTGAT...GGGTAGCAAGTGTGCTTCCGTCAAGATACCATATTCTCCTGCTCCAGTATAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR CAA 90 bp GGTGCAGTGGTCCGAACTGACTTCTCACAATGCTGCATTATGAGAAATATGTATGCAGTTCTTGTTCTTTaGACACAGGCCTCTAGCATA +
Preference number: 5 (lower is better)
Translates to: GAVVRTDFSQCCIMRNMYAVLVL*TQASSI
Trigger: TATGCTAGAGGCCTGTGTCAAAAGAACAAGAACTGC...ATACATATTTCTCATAATGCAGCATTGTGAGAAGTCAGTTCGGACCACTGCACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR CAA 90 bp GGTGCAGTGGTCCGAACTGACTTCTCACAATGCTGCATTATGAGAAATATGTATCGCAAGTCAGTTGTTTaGCTTGCCTTTTGTAGCTTG +
Preference number: 5 (lower is better)
Translates to: GAVVRTDFSQCCIMRNMYRKSVV*LAFCSL
Trigger: CAAGCTACAAAAGGCAAGCAAAACAACTGACTTGCG...ATACATATTTCTCATAATGCAGCATTGTGAGAAGTCAGTTCGGACCACTGCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR CAA 90 bp TCATGTTCTGATCACAAGCAGAGCCAAGGTTCATTTTTAGGTCAAACTACACAATCCAGGGCACAGAGTTaGGTGCTTTGCTTTTTGGCA +
Preference number: 5 (lower is better)
Translates to: SCSDHKQSQGSFLGQTTQSRAQS*VLCFLA
Trigger: TGCCAAAAAGCAAAGCACCAAACTCTGTGCCCTGGA...TTGTGTAGTTTGACCTAAAAATGAACCTTGGCTCTGCTTGTGATCAGAACATGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR CAA 90 bp AGATTTTTATTGCCTGCAAGCTGTTATACTGGAGCAGGAGAATATGGTATCTTGTCCAGGGCACAGAGTTaGGTGCTTTGCTTTTTGGCA +
Preference number: 5 (lower is better)
Translates to: RFLLPASCYTGAGEYGILSRAQS*VLCFLA
Trigger: TGCCAAAAAGCAAAGCACCAAACTCTGTGCCCTGGA...CAAGATACCATATTCTCCTGCTCCAGTATAACAGCTTGCAGGCAATAAAAATCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR CAA 90 bp GAATATGGTATCTTGACGGAAGCACACTTGCTACCCCACACCTGGGGATTACTTGATCCATTCCTGGTTTaGGAACATCAACATATTTTG +
Preference number: 5 (lower is better)
Translates to: EYGILTEAHLLPHTWGLLDPFLV*EHQHIL
Trigger: CAAAATATGTTGATGTTCCAAAACCAGGAATGGATC...AAGTAATCCCCAGGTGTGGGGTAGCAAGTGTGCTTCCGTCAAGATACCATATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR CAA 90 bp TTACTAAGTACAGAGCAATGTGTCGTGGAACAGCAAGCTTGGGGATGGTGCCATTTCTCGAAGAATATCTaGGTTTTGCCGAACAAACAT +
Preference number: 5 (lower is better)
Translates to: LLSTEQCVVEQQAWGWCHFSKNI*VLPNKH
Trigger: ATGTTTGTTCGGCAAAACCAAGATATTCTTCGAGAA...ATGGCACCATCCCCAAGCTTGCTGTTCCACGACACATTGCTCTGTACTTAGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CAA 90 bp GAATATGGTATCTTGACGGAAGCACACTTGCTACCCCACACCTGGGGATTACTTTTCTCGAAGAATATCTaGGTTTTGCCGAACAAACAT +
Preference number: 5 (lower is better)
Translates to: EYGILTEAHLLPHTWGLLFSKNI*VLPNKH
Trigger: ATGTTTGTTCGGCAAAACCAAGATATTCTTCGAGAA...AAGTAATCCCCAGGTGTGGGGTAGCAAGTGTGCTTCCGTCAAGATACCATATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR CAA 90 bp ACTGACTTCTCACAATGCTGCATTATGAGAAATATGTATCTCGCTTTACACAGAAAGGATACGACAGTGTaGGTGCAGTGGTCCGAACTG +
Preference number: 5 (lower is better)
Translates to: TDFSQCCIMRNMYLALHRKDTTV*VQWSEL
Trigger: CAGTTCGGACCACTGCACCAACACTGTCGTATCCTT...TCTGTGTAAAGCGAGATACATATTTCTCATAATGCAGCATTGTGAGAAGTCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR CAA 90 bp GAATATGGTATCTTGACGGAAGCACACTTGCTACCCCACACCTGGGGATTACTTTGGACATTTGAGGGTTaGGAGAAAATAGTATTTGGT +
Preference number: 5 (lower is better)
Translates to: EYGILTEAHLLPHTWGLLWTFEG*EKIVFG
Trigger: ACCAAATACTATTTTCTCCAAACCCTCAAATGTCCA...AAGTAATCCCCAGGTGTGGGGTAGCAAGTGTGCTTCCGTCAAGATACCATATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CAA 90 bp GACAGTGTTGGTGCAGTGGTCCGAACTGACTTCTCACAATGCTGCATTATGAGAATGGTCTCTTCTATTTaGGCATATTCTGTGAGTCTA +
Preference number: 5 (lower is better)
Translates to: DSVGAVVRTDFSQCCIMRMVSSI*AYSVSL
Trigger: TAGACTCACAGAATATGCCAAAATAGAAGAGACCAT...TCTCATAATGCAGCATTGTGAGAAGTCAGTTCGGACCACTGCACCAACACTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334010.11
ENST00000449022.7
CDS-3UTR CAA 90 bp TCATGTTCTGATCACAAGCAGAGCCAAGGTTCATTTTTAGGTCAAACTACACAATTGACTACCAAACTCTaGTCCTCCATCCAGGGCACA +
Preference number: 5 (lower is better)
Translates to: SCSDHKQSQGSFLGQTTQLTTKL*SSIQGT
Trigger: TGTGCCCTGGATGGAGGACAAGAGTTTGGTAGTCAA...TTGTGTAGTTTGACCTAAAAATGAACCTTGGCTCTGCTTGTGATCAGAACATGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000412584.6
CDS GCA 90 bp AAATGGCATCATATTTGGCTATCCATGAGCTCAACACTGTCTCTTTaGTCAAGCCATCTATTTCTGGCAAACTCCGCACACGTTTTTCTA +
Preference number: 5 (lower is better)
Translates to: KWHHIWLSMSSTLSL*SSHLFLANSAHVFL
Trigger: TAGAAAAACGTGTGCGGAGTTTGCCAGAAATAGATGGCTTGAGCAAAGAGACAGTGTTGAGCTCATGGATAGCCAAATATGATGCCATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000615869.4
CDS GCA 90 bp TTAAGTCTTTGCTCTAAGTGGTGGGCAAATTCCTGTTCTGGCCAGTaGAGATCAAAGACAAACATTTGCAGTGCATCAAGCTTCCAAAAA +
Preference number: 5 (lower is better)
Translates to: LSLCSKWWANSCSGQ*RSKTNICSASSFQK
Trigger: TTTTTGGAAGCTTGATGCACTGCAAATGTTTGTCTTTGATCTGCACTGGCCAGAACAGGAATTTGCCCACCACTTAGAGCAAAGACTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000397721.4
ENST00000412584.6
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS CCA 90 bp GAATTGCAGGAACTGGTTTATATGATTGACCTGTGGCCCTATACATaGCTTGAACCCATAATATTCTGTCCTGTTCATCATCACTGGCAA +
Preference number: 5 (lower is better)
Translates to: ELQELVYMIDLWPYT*LEPIIFCPVHHHWQ
Trigger: TTGCCAGTGATGATGAACAGGACAGAATATTATGGGTTCAAGCCATGTATAGGGCCACAGGTCAATCATATAAACCAGTTCCTGCAATTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000397721.4
ENST00000412584.6
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CAA 90 bp TTTTTATTGCCTGCAAGCTGTTATACTGGAGCAGGAGAATATGGTATCTTGACGAACTGCAACTGTTGTTaGTTAAGCTTCTGCTGCCTC +
Preference number: 5 (lower is better)
Translates to: FLLPASCYTGAGEYGILTNCNCC*LSFCCL
Trigger: GAGGCAGCAGAAGCTTAACAAACAACAGTTGCAGTT...CGTCAAGATACCATATTCTCCTGCTCCAGTATAACAGCTTGCAGGCAATAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CAA 90 bp GGTGCAGTGGTCCGAACTGACTTCTCACAATGCTGCATTATGAGAAATATGTATCTCAACACTGTCTCTTaGCTCAAGCCATCTATTTCT +
Preference number: 5 (lower is better)
Translates to: GAVVRTDFSQCCIMRNMYLNTVS*LKPSIS
Trigger: AGAAATAGATGGCTTGAGCAAAGAGACAGTGTTGAG...ATACATATTTCTCATAATGCAGCATTGTGAGAAGTCAGTTCGGACCACTGCACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CAA 90 bp GGTGCAGTGGTCCGAACTGACTTCTCACAATGCTGCATTATGAGAAATATGTATATTCTATTTGGCTGTTaGCACAAGTCCTCTTCACCT +
Preference number: 5 (lower is better)
Translates to: GAVVRTDFSQCCIMRNMYILFGC*HKSSSP
Trigger: AGGTGAAGAGGACTTGTGCAAACAGCCAAATAGAAT...ATACATATTTCTCATAATGCAGCATTGTGAGAAGTCAGTTCGGACCACTGCACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CAA 90 bp AGATTTTTATTGCCTGCAAGCTGTTATACTGGAGCAGGAGAATATGGTATCTTGGTACCACGTCGGACTTaGACAGCTGAATCTCATTCT +
Preference number: 5 (lower is better)
Translates to: RFLLPASCYTGAGEYGILVPRRT*TAESHS
Trigger: AGAATGAGATTCAGCTGTCAAAGTCCGACGTGGTAC...CAAGATACCATATTCTCCTGCTCCAGTATAACAGCTTGCAGGCAATAAAAATCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CAA 90 bp GTTGGTGCAGTGGTCCGAACTGACTTCTCACAATGCTGCATTATGAGAAATATGCTCCTTCCACTTCCATaGTACAGTAAACAATTCGAT +
Preference number: 5 (lower is better)
Translates to: VGAVVRTDFSQCCIMRNMLLPLP*YSKQFD
Trigger: ATCGAATTGTTTACTGTACAATGGAAGTGGAAGGAG...CATATTTCTCATAATGCAGCATTGTGAGAAGTCAGTTCGGACCACTGCACCAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CAA 90 bp TGCCATTGGAGAGTTTGGGATAGCATGACTGGACATTTGAGGGTTTGGAGAAAAATTCGCACTGCCAGTTaGATTTTTAAGTCAGAATCC +
Preference number: 5 (lower is better)
Translates to: CHWRVWDSMTGHLRVWRKIRTAS*IFKSES
Trigger: GGATTCTGACTTAAAAATCAAACTGGCAGTGCGAAT...TTTTCTCCAAACCCTCAAATGTCCAGTCATGCTATCCCAAACTCTCCAATGGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CAA 90 bp TCATGTTCTGATCACAAGCAGAGCCAAGGTTCATTTTTAGGTCAAACTACACAACAAAACCTCTGTGAATaGACTGGGCGATGGAAGACT +
Preference number: 5 (lower is better)
Translates to: SCSDHKQSQGSFLGQTTQQNLCE*TGRWKT
Trigger: AGTCTTCCATCGCCCAGTCAATTCACAGAGGTTTTG...TTGTGTAGTTTGACCTAAAAATGAACCTTGGCTCTGCTTGTGATCAGAACATGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR CAA 90 bp TCATGTTCTGATCACAAGCAGAGCCAAGGTTCATTTTTAGGTCAAACTACACAAACATTGGGAAGACTGTaGGCGATATTCTTGACAGGC +
Preference number: 5 (lower is better)
Translates to: SCSDHKQSQGSFLGQTTQTLGRL*AIFLTG
Trigger: GCCTGTCAAGAATATCGCCAACAGTCTTCCCAATGT...TTGTGTAGTTTGACCTAAAAATGAACCTTGGCTCTGCTTGTGATCAGAACATGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR CAA 90 bp TTTTTATTGCCTGCAAGCTGTTATACTGGAGCAGGAGAATATGGTATCTTGACGTTTGGAAGAGCTACATaGGGAAGACTGTTGGCGATA +
Preference number: 5 (lower is better)
Translates to: FLLPASCYTGAGEYGILTFGRAT*GRLLAI
Trigger: TATCGCCAACAGTCTTCCCAATGTAGCTCTTCCAAA...CGTCAAGATACCATATTCTCCTGCTCCAGTATAACAGCTTGCAGGCAATAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR CAA 90 bp GTTGGTGCAGTGGTCCGAACTGACTTCTCACAATGCTGCATTATGAGAAATATGATCAAAGACAAACATTaGCAGTGCATCAAGCTTCCA +
Preference number: 5 (lower is better)
Translates to: VGAVVRTDFSQCCIMRNMIKDKH*QCIKLP
Trigger: TGGAAGCTTGATGCACTGCAAATGTTTGTCTTTGAT...CATATTTCTCATAATGCAGCATTGTGAGAAGTCAGTTCGGACCACTGCACCAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR CAA 90 bp GAAGGAAGAAATTTCCTTGTTTGTTATCTTAGCCCTAGGGCCCAGAAAATGAGCGAATGCGCAAGTCAGTaGTTTTGCTTGCCTTTTGTA +
Preference number: 5 (lower is better)
Translates to: EGRNFLVCYLSPRAQKMSECASQ*FCLPFV
Trigger: TACAAAAGGCAAGCAAAACAACTGACTTGCGCATTC...GCTCATTTTCTGGGCCCTAGGGCTAAGATAACAAACAAGGAAATTTCTTCCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CAA 90 bp ATATGGTATCTTGACGGAAGCACACTTGCTACCCCACACCTGGGGATTACTTATTTGGTGCTTTGCTTTTaGGCATCGACTAATACATTA +
Preference number: 5 (lower is better)
Translates to: IWYLDGSTLATPHLGITYLVLCF*ASTNTL
Trigger: TAATGTATTAGTCGATGCCAAAAAGCAAAGCACCAA...ATAAGTAATCCCCAGGTGTGGGGTAGCAAGTGTGCTTCCGTCAAGATACCATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR CAA 90 bp CATTTTAACAAGGATACGACAGTGTTGGTGCAGTGGTCCGAACTGACTTCTCACGATCCATTCCTGGTTTaGGAACATCAACATATTTTG +
Preference number: 5 (lower is better)
Translates to: HFNKDTTVLVQWSELTSHDPFLV*EHQHIL
Trigger: CAAAATATGTTGATGTTCCAAAACCAGGAATGGATC...GTGAGAAGTCAGTTCGGACCACTGCACCAACACTGTCGTATCCTTGTTAAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR CAA 90 bp CATTTTAACAAGGATACGACAGTGTTGGTGCAGTGGTCCGAACTGACTTCTCACTTCTCGAAGAATATCTaGGTTTTGCCGAACAAACAT +
Preference number: 5 (lower is better)
Translates to: HFNKDTTVLVQWSELTSHFSKNI*VLPNKH
Trigger: ATGTTTGTTCGGCAAAACCAAGATATTCTTCGAGAA...GTGAGAAGTCAGTTCGGACCACTGCACCAACACTGTCGTATCCTTGTTAAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR CAA 90 bp GGTGCAGTGGTCCGAACTGACTTCTCACAATGCTGCATTATGAGAAATATGTATAGTCTATATTTGGGTTaGGCAATCCTTTCATCCCAG +
Preference number: 5 (lower is better)
Translates to: GAVVRTDFSQCCIMRNMYSLYLG*AILSSQ
Trigger: CTGGGATGAAAGGATTGCCAAACCCAAATATAGACT...ATACATATTTCTCATAATGCAGCATTGTGAGAAGTCAGTTCGGACCACTGCACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR CAA 90 bp TCATGTTCTGATCACAAGCAGAGCCAAGGTTCATTTTTAGGTCAAACTACACAAAACTGCAACTGTTGTTaGTTAAGCTTCTGCTGCCTC +
Preference number: 5 (lower is better)
Translates to: SCSDHKQSQGSFLGQTTQNCNCC*LSFCCL
Trigger: GAGGCAGCAGAAGCTTAACAAACAACAGTTGCAGTT...TTGTGTAGTTTGACCTAAAAATGAACCTTGGCTCTGCTTGTGATCAGAACATGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CAA 90 bp TTTTTATTGCCTGCAAGCTGTTATACTGGAGCAGGAGAATATGGTATCTTGACGCTCAACACTGTCTCTTaGCTCAAGCCATCTATTTCT +
Preference number: 5 (lower is better)
Translates to: FLLPASCYTGAGEYGILTLNTVS*LKPSIS
Trigger: AGAAATAGATGGCTTGAGCAAAGAGACAGTGTTGAG...CGTCAAGATACCATATTCTCCTGCTCCAGTATAACAGCTTGCAGGCAATAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CAA 90 bp ACTGACTTCTCACAATGCTGCATTATGAGAAATATGTATCTCGCTTTACACAGACATTTTATCTGCCAATaGCAGCCGGCCATCAAGTTC +
Preference number: 5 (lower is better)
Translates to: TDFSQCCIMRNMYLALHRHFICQ*QPAIKF
Trigger: GAACTTGATGGCCGGCTGCAATTGGCAGATAAAATG...TCTGTGTAAAGCGAGATACATATTTCTCATAATGCAGCATTGTGAGAAGTCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CAA 90 bp GGTGCAGTGGTCCGAACTGACTTCTCACAATGCTGCATTATGAGAAATATGTATGGAAGACTTTCCAAATaGGCCATTAGCAAATTCACT +
Preference number: 5 (lower is better)
Translates to: GAVVRTDFSQCCIMRNMYGRLSK*AISKFT
Trigger: AGTGAATTTGCTAATGGCCAATTTGGAAAGTCTTCC...ATACATATTTCTCATAATGCAGCATTGTGAGAAGTCAGTTCGGACCACTGCACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CAA 90 bp GGTGCAGTGGTCCGAACTGACTTCTCACAATGCTGCATTATGAGAAATATGTATGTTTCTGGGTTTGAATaGCAGGAACTGGTTTATATG +
Preference number: 5 (lower is better)
Translates to: GAVVRTDFSQCCIMRNMYVSGFE*QELVYM
Trigger: CATATAAACCAGTTCCTGCAATTCAAACCCAGAAAC...ATACATATTTCTCATAATGCAGCATTGTGAGAAGTCAGTTCGGACCACTGCACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CAA 90 bp CCATTGGATAATCTAGTCTATATTTGGGTTTGGCAATCCTTTCATCCCAGGAATGCTGGGCCTTCTATTTaGGCATATTCTGTGAGTCTA +
Preference number: 5 (lower is better)
Translates to: PLDNLVYIWVWQSFHPRNAGPSI*AYSVSL
Trigger: TAGACTCACAGAATATGCCAAAATAGAAGGCCCAGC...ATTCCTGGGATGAAAGGATTGCCAAACCCAAATATAGACTAGATTATCCAATGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313070.11
ENST00000462699.5
ENST00000615869.4
CDS-3UTR CAA 90 bp ACTGACTTCTCACAATGCTGCATTATGAGAAATATGTATCTCGCTTTACACAGACAAAACCTCTGTGAATaGACTGGGCGATGGAAGACT +
Preference number: 5 (lower is better)
Translates to: TDFSQCCIMRNMYLALHRQNLCE*TGRWKT
Trigger: AGTCTTCCATCGCCCAGTCAATTCACAGAGGTTTTG...TCTGTGTAAAGCGAGATACATATTTCTCATAATGCAGCATTGTGAGAAGTCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR CAA 90 bp ATTTTTATTGCCTGCAAGCTGTTATACTGGAGCAGGAGAATATGGTATCTTGACGCAGACTTGGAACTTTaGGAAGAGCTACATTGGGAA +
Preference number: 5 (lower is better)
Translates to: IFIACKLLYWSRRIWYLDADLEL*EELHWE
Trigger: TTCCCAATGTAGCTCTTCCAAAAGTTCCAAGTCTGC...GTCAAGATACCATATTCTCCTGCTCCAGTATAACAGCTTGCAGGCAATAAAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR CAA 90 bp CCATTGGATAATCTAGTCTATATTTGGGTTTGGCAATCCTTTCATCCCAGGAATGCAGACTTGGAACTTTaGGAAGAGCTACATTGGGAA +
Preference number: 5 (lower is better)
Translates to: PLDNLVYIWVWQSFHPRNADLEL*EELHWE
Trigger: TTCCCAATGTAGCTCTTCCAAAAGTTCCAAGTCTGC...ATTCCTGGGATGAAAGGATTGCCAAACCCAAATATAGACTAGATTATCCAATGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR CAA 90 bp ACTGACTTCTCACAATGCTGCATTATGAGAAATATGTATCTCGCTTTACACAGAAAAGGTCTTCTGATGTaGCTGAGCCATTGGTGGACT +
Preference number: 5 (lower is better)
Translates to: TDFSQCCIMRNMYLALHRKGLLM*LSHWWT
Trigger: AGTCCACCAATGGCTCAGCAACATCAGAAGACCTTT...TCTGTGTAAAGCGAGATACATATTTCTCATAATGCAGCATTGTGAGAAGTCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR CAA 90 bp AGATTTTTATTGCCTGCAAGCTGTTATACTGGAGCAGGAGAATATGGTATCTTGGCAGTTCTTGTTCTTTaGACACAGGCCTCTAGCATA +
Preference number: 5 (lower is better)
Translates to: RFLLPASCYTGAGEYGILAVLVL*TQASSI
Trigger: TATGCTAGAGGCCTGTGTCAAAAGAACAAGAACTGC...CAAGATACCATATTCTCCTGCTCCAGTATAACAGCTTGCAGGCAATAAAAATCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR CAA 90 bp ATTTTTATTGCCTGCAAGCTGTTATACTGGAGCAGGAGAATATGGTATCTTGACGCAGTTCTTGTTCTTTaGACACAGGCCTCTAGCATA +
Preference number: 5 (lower is better)
Translates to: IFIACKLLYWSRRIWYLDAVLVL*TQASSI
Trigger: TATGCTAGAGGCCTGTGTCAAAAGAACAAGAACTGC...GTCAAGATACCATATTCTCCTGCTCCAGTATAACAGCTTGCAGGCAATAAAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR CAA 90 bp TCATGTTCTGATCACAAGCAGAGCCAAGGTTCATTTTTAGGTCAAACTACACAACGCAAGTCAGTTGTTTaGCTTGCCTTTTGTAGCTTG +
Preference number: 5 (lower is better)
Translates to: SCSDHKQSQGSFLGQTTQRKSVV*LAFCSL
Trigger: CAAGCTACAAAAGGCAAGCAAAACAACTGACTTGCG...TTGTGTAGTTTGACCTAAAAATGAACCTTGGCTCTGCTTGTGATCAGAACATGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR CAA 90 bp ATTTTTATTGCCTGCAAGCTGTTATACTGGAGCAGGAGAATATGGTATCTTGACCGCAAGTCAGTTGTTTaGCTTGCCTTTTGTAGCTTG +
Preference number: 5 (lower is better)
Translates to: IFIACKLLYWSRRIWYLDRKSVV*LAFCSL
Trigger: CAAGCTACAAAAGGCAAGCAAAACAACTGACTTGCG...GTCAAGATACCATATTCTCCTGCTCCAGTATAACAGCTTGCAGGCAATAAAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR CAA 90 bp TGCCATTGGAGAGTTTGGGATAGCATGACTGGACATTTGAGGGTTTGGAGAAAAGATCCATTCCTGGTTTaGGAACATCAACATATTTTG +
Preference number: 5 (lower is better)
Translates to: CHWRVWDSMTGHLRVWRKDPFLV*EHQHIL
Trigger: CAAAATATGTTGATGTTCCAAAACCAGGAATGGATC...TTTTCTCCAAACCCTCAAATGTCCAGTCATGCTATCCCAAACTCTCCAATGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CAA 90 bp TGCCATTGGAGAGTTTGGGATAGCATGACTGGACATTTGAGGGTTTGGAGAAAATTCTCGAAGAATATCTaGGTTTTGCCGAACAAACAT +
Preference number: 5 (lower is better)
Translates to: CHWRVWDSMTGHLRVWRKFSKNI*VLPNKH
Trigger: ATGTTTGTTCGGCAAAACCAAGATATTCTTCGAGAA...TTTTCTCCAAACCCTCAAATGTCCAGTCATGCTATCCCAAACTCTCCAATGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CAA 90 bp ATTTTTATTGCCTGCAAGCTGTTATACTGGAGCAGGAGAATATGGTATCTTGACGGAGAATATGGTATCTaGACGGAAGCACACTTGCTA +
Preference number: 5 (lower is better)
Translates to: IFIACKLLYWSRRIWYLDGEYGI*TEAHLL
Trigger: TAGCAAGTGTGCTTCCGTCAAGATACCATATTCTCC...GTCAAGATACCATATTCTCCTGCTCCAGTATAACAGCTTGCAGGCAATAAAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR CAA 90 bp ATTTTTATTGCCTGCAAGCTGTTATACTGGAGCAGGAGAATATGGTATCTTGACATTCTATTTGGCTGTTaGCACAAGTCCTCTTCACCT +
Preference number: 5 (lower is better)
Translates to: IFIACKLLYWSRRIWYLDILFGC*HKSSSP
Trigger: AGGTGAAGAGGACTTGTGCAAACAGCCAAATAGAAT...GTCAAGATACCATATTCTCCTGCTCCAGTATAACAGCTTGCAGGCAATAAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CAA 90 bp TCATGTTCTGATCACAAGCAGAGCCAAGGTTCATTTTTAGGTCAAACTACACAAATTCTATTTGGCTGTTaGCACAAGTCCTCTTCACCT +
Preference number: 5 (lower is better)
Translates to: SCSDHKQSQGSFLGQTTQILFGC*HKSSSP
Trigger: AGGTGAAGAGGACTTGTGCAAACAGCCAAATAGAAT...TTGTGTAGTTTGACCTAAAAATGAACCTTGGCTCTGCTTGTGATCAGAACATGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CAA 90 bp ACTGACTTCTCACAATGCTGCATTATGAGAAATATGTATCTCGCTTTACACAGATTAGGGCCATTCTATTaGGCTGTTTGCACAAGTCCT +
Preference number: 5 (lower is better)
Translates to: TDFSQCCIMRNMYLALHRLGPFY*AVCTSP
Trigger: AGGACTTGTGCAAACAGCCAAATAGAATGGCCCTAA...TCTGTGTAAAGCGAGATACATATTTCTCATAATGCAGCATTGTGAGAAGTCAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CAA 90 bp TTTTTATTGCCTGCAAGCTGTTATACTGGAGCAGGAGAATATGGTATCTTGACGGTTTCTGGGTTTGAATaGCAGGAACTGGTTTATATG +
Preference number: 5 (lower is better)
Translates to: FLLPASCYTGAGEYGILTVSGFE*QELVYM
Trigger: CATATAAACCAGTTCCTGCAATTCAAACCCAGAAAC...CGTCAAGATACCATATTCTCCTGCTCCAGTATAACAGCTTGCAGGCAATAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CAA 90 bp GACTTCTCACAATGCTGCATTATGAGAAATATGTATCTCGCTTTACACAGAAAACAAAACCTCTGTGAATaGACTGGGCGATGGAAGACT +
Preference number: 5 (lower is better)
Translates to: DFSQCCIMRNMYLALHRKQNLCE*TGRWKT
Trigger: AGTCTTCCATCGCCCAGTCAATTCACAGAGGTTTTG...TTTTCTGTGTAAAGCGAGATACATATTTCTCATAATGCAGCATTGTGAGAAGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR CAA 90 bp TCATGTTCTGATCACAAGCAGAGCCAAGGTTCATTTTTAGGTCAAACTACACAAGAATGCGCAAGTCAGTaGTTTTGCTTGCCTTTTGTA +
Preference number: 5 (lower is better)
Translates to: SCSDHKQSQGSFLGQTTQECASQ*FCLPFV
Trigger: TACAAAAGGCAAGCAAAACAACTGACTTGCGCATTC...TTGTGTAGTTTGACCTAAAAATGAACCTTGGCTCTGCTTGTGATCAGAACATGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR CAA 90 bp AGATTTTTATTGCCTGCAAGCTGTTATACTGGAGCAGGAGAATATGGTATCTTGGAATGCGCAAGTCAGTaGTTTTGCTTGCCTTTTGTA +
Preference number: 5 (lower is better)
Translates to: RFLLPASCYTGAGEYGILECASQ*FCLPFV
Trigger: TACAAAAGGCAAGCAAAACAACTGACTTGCGCATTC...CAAGATACCATATTCTCCTGCTCCAGTATAACAGCTTGCAGGCAATAAAAATCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR CAA 90 bp GAAGGAAGAAATTTCCTTGTTTGTTATCTTAGCCCTAGGGCCCAGAAAATGAGCTTGGTGCTTTGCTTTTaGGCATCGACTAATACATTA +
Preference number: 5 (lower is better)
Translates to: EGRNFLVCYLSPRAQKMSLVLCF*ASTNTL
Trigger: TAATGTATTAGTCGATGCCAAAAAGCAAAGCACCAA...GCTCATTTTCTGGGCCCTAGGGCTAAGATAACAAACAAGGAAATTTCTTCCTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CAA 90 bp CCATTGGATAATCTAGTCTATATTTGGGTTTGGCAATCCTTTCATCCCAGGAATAGTCTATATTTGGGTTaGGCAATCCTTTCATCCCAG +
Preference number: 5 (lower is better)
Translates to: PLDNLVYIWVWQSFHPRNSLYLG*AILSSQ
Trigger: CTGGGATGAAAGGATTGCCAAACCCAAATATAGACT...ATTCCTGGGATGAAAGGATTGCCAAACCCAAATATAGACTAGATTATCCAATGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR CAA 90 bp GACTTCTCACAATGCTGCATTATGAGAAATATGTATCTCGCTTTACACAGAAAAAACTGCAACTGTTGTTaGTTAAGCTTCTGCTGCCTC +
Preference number: 5 (lower is better)
Translates to: DFSQCCIMRNMYLALHRKNCNCC*LSFCCL
Trigger: GAGGCAGCAGAAGCTTAACAAACAACAGTTGCAGTT...TTTTCTGTGTAAAGCGAGATACATATTTCTCATAATGCAGCATTGTGAGAAGTC
39% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CAA 90 bp ATTTTTATTGCCTGCAAGCTGTTATACTGGAGCAGGAGAATATGGTATCTTGACCTCCTTCCACTTCCATaGTACAGTAAACAATTCGAT +
Preference number: 5 (lower is better)
Translates to: IFIACKLLYWSRRIWYLDLLPLP*YSKQFD
Trigger: ATCGAATTGTTTACTGTACAATGGAAGTGGAAGGAG...GTCAAGATACCATATTCTCCTGCTCCAGTATAACAGCTTGCAGGCAATAAAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CAA 90 bp TCATGTTCTGATCACAAGCAGAGCCAAGGTTCATTTTTAGGTCAAACTACACAATGTAATTCAGCTGATTaGGAGCTATTAGAAGTTGGG +
Preference number: 5 (lower is better)
Translates to: SCSDHKQSQGSFLGQTTQCNSAD*ELLEVG
Trigger: CCCAACTTCTAATAGCTCCAAATCAGCTGAATTACA...TTGTGTAGTTTGACCTAAAAATGAACCTTGGCTCTGCTTGTGATCAGAACATGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CAA 90 bp AGATTTTTATTGCCTGCAAGCTGTTATACTGGAGCAGGAGAATATGGTATCTTGGTTTCTGGGTTTGAATaGCAGGAACTGGTTTATATG +
Preference number: 5 (lower is better)
Translates to: RFLLPASCYTGAGEYGILVSGFE*QELVYM
Trigger: CATATAAACCAGTTCCTGCAATTCAAACCCAGAAAC...CAAGATACCATATTCTCCTGCTCCAGTATAACAGCTTGCAGGCAATAAAAATCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CAA 90 bp TTGGATAATCTAGTCTATATTTGGGTTTGGCAATCCTTTCATCCCAGGAATATAGCTGGGCCTTCTATTTaGGCATATTCTGTGAGTCTA +
Preference number: 5 (lower is better)
Translates to: LDNLVYIWVWQSFHPRNIAGPSI*AYSVSL
Trigger: TAGACTCACAGAATATGCCAAAATAGAAGGCCCAGC...TATATTCCTGGGATGAAAGGATTGCCAAACCCAAATATAGACTAGATTATCCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313070.11
ENST00000462699.5
ENST00000615869.4
CDS-3UTR CAA 90 bp GACTTCTCACAATGCTGCATTATGAGAAATATGTATCTCGCTTTACACAGAAAATTTGGAAGAGCTACATaGGGAAGACTGTTGGCGATA +
Preference number: 5 (lower is better)
Translates to: DFSQCCIMRNMYLALHRKFGRAT*GRLLAI
Trigger: TATCGCCAACAGTCTTCCCAATGTAGCTCTTCCAAA...TTTTCTGTGTAAAGCGAGATACATATTTCTCATAATGCAGCATTGTGAGAAGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR CAA 90 bp TTGGATAATCTAGTCTATATTTGGGTTTGGCAATCCTTTCATCCCAGGAATATAGGAGAATATGGTATCTaGACGGAAGCACACTTGCTA +
Preference number: 5 (lower is better)
Translates to: LDNLVYIWVWQSFHPRNIGEYGI*TEAHLL
Trigger: TAGCAAGTGTGCTTCCGTCAAGATACCATATTCTCC...TATATTCCTGGGATGAAAGGATTGCCAAACCCAAATATAGACTAGATTATCCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR CAA 90 bp GACTTCTCACAATGCTGCATTATGAGAAATATGTATCTCGCTTTACACAGAAAAGGAGAATATGGTATCTaGACGGAAGCACACTTGCTA +
Preference number: 5 (lower is better)
Translates to: DFSQCCIMRNMYLALHRKGEYGI*TEAHLL
Trigger: TAGCAAGTGTGCTTCCGTCAAGATACCATATTCTCC...TTTTCTGTGTAAAGCGAGATACATATTTCTCATAATGCAGCATTGTGAGAAGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR CAA 90 bp TTTTTATTGCCTGCAAGCTGTTATACTGGAGCAGGAGAATATGGTATCTTGACGTGGACATTTGAGGGTTaGGAGAAAATAGTATTTGGT +
Preference number: 5 (lower is better)
Translates to: FLLPASCYTGAGEYGILTWTFEG*EKIVFG
Trigger: ACCAAATACTATTTTCTCCAAACCCTCAAATGTCCA...CGTCAAGATACCATATTCTCCTGCTCCAGTATAACAGCTTGCAGGCAATAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CAA 90 bp TTTTTATTGCCTGCAAGCTGTTATACTGGAGCAGGAGAATATGGTATCTTGACGATGGTCTCTTCTATTTaGGCATATTCTGTGAGTCTA +
Preference number: 5 (lower is better)
Translates to: FLLPASCYTGAGEYGILTMVSSI*AYSVSL
Trigger: TAGACTCACAGAATATGCCAAAATAGAAGAGACCAT...CGTCAAGATACCATATTCTCCTGCTCCAGTATAACAGCTTGCAGGCAATAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334010.11
ENST00000449022.7
CDS-3UTR CAA 90 bp GACTTCTCACAATGCTGCATTATGAGAAATATGTATCTCGCTTTACACAGAAAACTCAACACTGTCTCTTaGCTCAAGCCATCTATTTCT +
Preference number: 5 (lower is better)
Translates to: DFSQCCIMRNMYLALHRKLNTVS*LKPSIS
Trigger: AGAAATAGATGGCTTGAGCAAAGAGACAGTGTTGAG...TTTTCTGTGTAAAGCGAGATACATATTTCTCATAATGCAGCATTGTGAGAAGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CAA 90 bp ACTGACTTCTCACAATGCTGCATTATGAGAAATATGTATCTCGCTTTACACAGAGGAAGACTTTCCAAATaGGCCATTAGCAAATTCACT +
Preference number: 5 (lower is better)
Translates to: TDFSQCCIMRNMYLALHRGRLSK*AISKFT
Trigger: AGTGAATTTGCTAATGGCCAATTTGGAAAGTCTTCC...TCTGTGTAAAGCGAGATACATATTTCTCATAATGCAGCATTGTGAGAAGTCAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CAA 90 bp ACTGACTTCTCACAATGCTGCATTATGAGAAATATGTATCTCGCTTTACACAGACTCCTTCCACTTCCATaGTACAGTAAACAATTCGAT +
Preference number: 5 (lower is better)
Translates to: TDFSQCCIMRNMYLALHRLLPLP*YSKQFD
Trigger: ATCGAATTGTTTACTGTACAATGGAAGTGGAAGGAG...TCTGTGTAAAGCGAGATACATATTTCTCATAATGCAGCATTGTGAGAAGTCAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CAA 90 bp ACTGACTTCTCACAATGCTGCATTATGAGAAATATGTATCTCGCTTTACACAGAATTCGCACTGCCAGTTaGATTTTTAAGTCAGAATCC +
Preference number: 5 (lower is better)
Translates to: TDFSQCCIMRNMYLALHRIRTAS*IFKSES
Trigger: GGATTCTGACTTAAAAATCAAACTGGCAGTGCGAAT...TCTGTGTAAAGCGAGATACATATTTCTCATAATGCAGCATTGTGAGAAGTCAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CAA 90 bp ACTGACTTCTCACAATGCTGCATTATGAGAAATATGTATCTCGCTTTACACAGAATCAAAGACAAACATTaGCAGTGCATCAAGCTTCCA +
Preference number: 5 (lower is better)
Translates to: TDFSQCCIMRNMYLALHRIKDKH*QCIKLP
Trigger: TGGAAGCTTGATGCACTGCAAATGTTTGTCTTTGAT...TCTGTGTAAAGCGAGATACATATTTCTCATAATGCAGCATTGTGAGAAGTCAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR CAA 90 bp GACTTCTCACAATGCTGCATTATGAGAAATATGTATCTCGCTTTACACAGAAAAGAATGCGCAAGTCAGTaGTTTTGCTTGCCTTTTGTA +
Preference number: 5 (lower is better)
Translates to: DFSQCCIMRNMYLALHRKECASQ*FCLPFV
Trigger: TACAAAAGGCAAGCAAAACAACTGACTTGCGCATTC...TTTTCTGTGTAAAGCGAGATACATATTTCTCATAATGCAGCATTGTGAGAAGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR CAA 90 bp TCATGTTCTGATCACAAGCAGAGCCAAGGTTCATTTTTAGGTCAAACTACACAATTGGTGCTTTGCTTTTaGGCATCGACTAATACATTA +
Preference number: 5 (lower is better)
Translates to: SCSDHKQSQGSFLGQTTQLVLCF*ASTNTL
Trigger: TAATGTATTAGTCGATGCCAAAAAGCAAAGCACCAA...TTGTGTAGTTTGACCTAAAAATGAACCTTGGCTCTGCTTGTGATCAGAACATGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR CAA 90 bp ATTTTTATTGCCTGCAAGCTGTTATACTGGAGCAGGAGAATATGGTATCTTGACTTGGTGCTTTGCTTTTaGGCATCGACTAATACATTA +
Preference number: 5 (lower is better)
Translates to: IFIACKLLYWSRRIWYLDLVLCF*ASTNTL
Trigger: TAATGTATTAGTCGATGCCAAAAAGCAAAGCACCAA...GTCAAGATACCATATTCTCCTGCTCCAGTATAACAGCTTGCAGGCAATAAAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR CAA 90 bp AGATTTTTATTGCCTGCAAGCTGTTATACTGGAGCAGGAGAATATGGTATCTTGGATCCATTCCTGGTTTaGGAACATCAACATATTTTG +
Preference number: 5 (lower is better)
Translates to: RFLLPASCYTGAGEYGILDPFLV*EHQHIL
Trigger: CAAAATATGTTGATGTTCCAAAACCAGGAATGGATC...CAAGATACCATATTCTCCTGCTCCAGTATAACAGCTTGCAGGCAATAAAAATCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR CAA 90 bp CCATTGGATAATCTAGTCTATATTTGGGTTTGGCAATCCTTTCATCCCAGGAATTTCTCGAAGAATATCTaGGTTTTGCCGAACAAACAT +
Preference number: 5 (lower is better)
Translates to: PLDNLVYIWVWQSFHPRNFSKNI*VLPNKH
Trigger: ATGTTTGTTCGGCAAAACCAAGATATTCTTCGAGAA...ATTCCTGGGATGAAAGGATTGCCAAACCCAAATATAGACTAGATTATCCAATGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR CAA 90 bp TCATGTTCTGATCACAAGCAGAGCCAAGGTTCATTTTTAGGTCAAACTACACAATGGACATTTGAGGGTTaGGAGAAAATAGTATTTGGT +
Preference number: 5 (lower is better)
Translates to: SCSDHKQSQGSFLGQTTQWTFEG*EKIVFG
Trigger: ACCAAATACTATTTTCTCCAAACCCTCAAATGTCCA...TTGTGTAGTTTGACCTAAAAATGAACCTTGGCTCTGCTTGTGATCAGAACATGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS TCA 90 bp AAATATGGAGTTGGAGGTCTAATCTATCAGTCAACCACACGCAAATaGCTTTCATGGAACTGCTGTACCATTGATCAAATAACTTTTCTA +
Preference number: 5 (lower is better)
Translates to: KYGVGGLIYQSTTRK*LSWNCCTIDQITFL
Trigger: TAGAAAAGTTATTTGATCAATGGTACAGCAGTTCCATGAAAGTCATTTGCGTGTGGTTGACTGATAGATTAGACCTCCAACTCCATATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000397721.4
ENST00000412584.6
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR CAA 90 bp TTGGATAATCTAGTCTATATTTGGGTTTGGCAATCCTTTCATCCCAGGAATATAGGAAGACTTTCCAAATaGGCCATTAGCAAATTCACT +
Preference number: 5 (lower is better)
Translates to: LDNLVYIWVWQSFHPRNIGRLSK*AISKFT
Trigger: AGTGAATTTGCTAATGGCCAATTTGGAAAGTCTTCC...TATATTCCTGGGATGAAAGGATTGCCAAACCCAAATATAGACTAGATTATCCAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CAA 90 bp TTGGATAATCTAGTCTATATTTGGGTTTGGCAATCCTTTCATCCCAGGAATATACTCCTTCCACTTCCATaGTACAGTAAACAATTCGAT +
Preference number: 5 (lower is better)
Translates to: LDNLVYIWVWQSFHPRNILLPLP*YSKQFD
Trigger: ATCGAATTGTTTACTGTACAATGGAAGTGGAAGGAG...TATATTCCTGGGATGAAAGGATTGCCAAACCCAAATATAGACTAGATTATCCAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CAA 90 bp GACTTCTCACAATGCTGCATTATGAGAAATATGTATCTCGCTTTACACAGAAAACTCCTTCCACTTCCATaGTACAGTAAACAATTCGAT +
Preference number: 5 (lower is better)
Translates to: DFSQCCIMRNMYLALHRKLLPLP*YSKQFD
Trigger: ATCGAATTGTTTACTGTACAATGGAAGTGGAAGGAG...TTTTCTGTGTAAAGCGAGATACATATTTCTCATAATGCAGCATTGTGAGAAGTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CAA 90 bp GACTTCTCACAATGCTGCATTATGAGAAATATGTATCTCGCTTTACACAGAAAATGTAATTCAGCTGATTaGGAGCTATTAGAAGTTGGG +
Preference number: 5 (lower is better)
Translates to: DFSQCCIMRNMYLALHRKCNSAD*ELLEVG
Trigger: CCCAACTTCTAATAGCTCCAAATCAGCTGAATTACA...TTTTCTGTGTAAAGCGAGATACATATTTCTCATAATGCAGCATTGTGAGAAGTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000615869.4
CDS-3UTR CAA 90 bp GACTTCTCACAATGCTGCATTATGAGAAATATGTATCTCGCTTTACACAGAAAAATCAAAGACAAACATTaGCAGTGCATCAAGCTTCCA +
Preference number: 5 (lower is better)
Translates to: DFSQCCIMRNMYLALHRKIKDKH*QCIKLP
Trigger: TGGAAGCTTGATGCACTGCAAATGTTTGTCTTTGAT...TTTTCTGTGTAAAGCGAGATACATATTTCTCATAATGCAGCATTGTGAGAAGTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR CAA 90 bp TTGGATAATCTAGTCTATATTTGGGTTTGGCAATCCTTTCATCCCAGGAATATAATCAAAGACAAACATTaGCAGTGCATCAAGCTTCCA +
Preference number: 5 (lower is better)
Translates to: LDNLVYIWVWQSFHPRNIIKDKH*QCIKLP
Trigger: TGGAAGCTTGATGCACTGCAAATGTTTGTCTTTGAT...TATATTCCTGGGATGAAAGGATTGCCAAACCCAAATATAGACTAGATTATCCAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR CAA 90 bp ACTGACTTCTCACAATGCTGCATTATGAGAAATATGTATCTCGCTTTACACAGAATGGTCTCTTCTATTTaGGCATATTCTGTGAGTCTA +
Preference number: 5 (lower is better)
Translates to: TDFSQCCIMRNMYLALHRMVSSI*AYSVSL
Trigger: TAGACTCACAGAATATGCCAAAATAGAAGAGACCAT...TCTGTGTAAAGCGAGATACATATTTCTCATAATGCAGCATTGTGAGAAGTCAGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
CDS-3UTR CAA 90 bp GACTTCTCACAATGCTGCATTATGAGAAATATGTATCTCGCTTTACACAGAAAATTGGTGCTTTGCTTTTaGGCATCGACTAATACATTA +
Preference number: 5 (lower is better)
Translates to: DFSQCCIMRNMYLALHRKLVLCF*ASTNTL
Trigger: TAATGTATTAGTCGATGCCAAAAAGCAAAGCACCAA...TTTTCTGTGTAAAGCGAGATACATATTTCTCATAATGCAGCATTGTGAGAAGTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR CAA 90 bp GACTTCTCACAATGCTGCATTATGAGAAATATGTATCTCGCTTTACACAGAAAAGATCCATTCCTGGTTTaGGAACATCAACATATTTTG +
Preference number: 5 (lower is better)
Translates to: DFSQCCIMRNMYLALHRKDPFLV*EHQHIL
Trigger: CAAAATATGTTGATGTTCCAAAACCAGGAATGGATC...TTTTCTGTGTAAAGCGAGATACATATTTCTCATAATGCAGCATTGTGAGAAGTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS-3UTR CAA 90 bp GACTTCTCACAATGCTGCATTATGAGAAATATGTATCTCGCTTTACACAGAAAATTCTCGAAGAATATCTaGGTTTTGCCGAACAAACAT +
Preference number: 5 (lower is better)
Translates to: DFSQCCIMRNMYLALHRKFSKNI*VLPNKH
Trigger: ATGTTTGTTCGGCAAAACCAAGATATTCTTCGAGAA...TTTTCTGTGTAAAGCGAGATACATATTTCTCATAATGCAGCATTGTGAGAAGTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS CCA 72 bp CCCCGGCGCGTCCCGCCGCCCTTCCCGAGTCGGGGCTaGAGGAGCTCGCTGCGAGCTGCCGGCTGCCACCAG +
Preference number: 6 (lower is better)
Translates to: PRRVPPPFPSRG*RSSLRAAGCHQ
Trigger: CTGGTGGCAGCCGGCAGCTCGCAGCGAGCTCCTCCAGCCCCGACTCGGGAAGGGCGGCGGGACGCGCCGGGG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000615869.4
CDS GCA 72 bp CGCCGCCCTTCCCGAGTCGGGGCTGGAGGAGCTCGCTaGGAGCTGCCGGCTGCCACCAGCACATCGCGGCTT +
Preference number: 6 (lower is better)
Translates to: RRPSRVGAGGAR*ELPAATSTSRL
Trigger: AAGCCGCGATGTGCTGGTGGCAGCCGGCAGCTCGCAGCGAGCTCCTCCAGCCCCGACTCGGGAAGGGCGGCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000615869.4
CDS CCA 72 bp CGGATCCTCCGCTCCTGCTCATCGTCCAGCTGCCGCTaGGGCTCGTCTCGCCCCTCGCTGAGCACAGAGGGG +
Preference number: 6 (lower is better)
Translates to: RILRSCSSSSCR*GSSRPSLSTEG
Trigger: CCCCTCTGTGCTCAGCGAGGGGCGAGACGAGCCCCAGCGGCAGCTGGACGATGAGCAGGAGCGGAGGATCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000615869.4
CDS GCA 72 bp CTTCCCGAGTCGGGGCTGGAGGAGCTCGCTGCGAGCTaGCGGCTGCCACCAGCACATCGCGGCTTTCCTCTT +
Preference number: 6 (lower is better)
Translates to: LPESGLEELAAS*RLPPAHRGFPL
Trigger: AAGAGGAAAGCCGCGATGTGCTGGTGGCAGCCGGCAGCTCGCAGCGAGCTCCTCCAGCCCCGACTCGGGAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000615869.4
CDS CCA 72 bp GGGCTGGCTGCAGCGGCCGCAGAACGAAAGGAAAACTaGCCAGGGCTTTCCGGACACGTCGAGTTAGATTCA +
Preference number: 6 (lower is better)
Translates to: GLAAAAAERKEN*PGLSGHVELDS
Trigger: TGAATCTAACTCGACGTGTCCGGAAAGCCCTGGCCAGTTTTCCTTTCGTTCTGCGGCCGCTGCAGCCAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000615869.4
CDS TCA 72 bp TTGACAGGCTGCCATGTCTCCTGCTCAAAACCTCTGTaGATTGACTGGGCGATGGAAGACTCCATGAGATCC +
Preference number: 6 (lower is better)
Translates to: LTGCHVSCSKPL*IDWAMEDSMRS
Trigger: GGATCTCATGGAGTCTTCCATCGCCCAGTCAATTCACAGAGGTTTTGAGCAGGAGACATGGCAGCCTGTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000397721.4
ENST00000412584.6
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS TCA 72 bp ACCACAGGCCGAGGATGGGTGGTGGTGAAATCTCCTTaGGTCCCCCATCTTCAATATTCACCAAGACATCTC +
Preference number: 6 (lower is better)
Translates to: TTGRGWVVVKSP*VPHLQYSPRHL
Trigger: GAGATGTCTTGGTGAATATTGAAGATGGGGGACTCAAGGAGATTTCACCACCACCCATCCTCGGCCTGTGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476131.1
CDS CAA 72 bp GCCAGAACTCCAGTGCTTTCTGTGAAGAGTTTCACTTaGACCACAGGCCGAGGATGGGTGGTGGTGAAATCT +
Preference number: 6 (lower is better)
Translates to: ARTPVLSVKSFT*TTGRGWVVVKS
Trigger: AGATTTCACCACCACCCATCCTCGGCCTGTGGTCAAAGTGAAACTCTTCACAGAAAGCACTGGAGTTCTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000397721.4
ENST00000412584.6
ENST00000449022.7
ENST00000476131.1
ENST00000615869.4
CDS TCA 72 bp AACCTCTGTGAATTGACTGGGCGATGGAAGACTCCATaGGATCCACATAGCGGACAACCAAGGGTACAAAGA +
Preference number: 6 (lower is better)
Translates to: NLCELTGRWKTP*DPHSGQPRVQR
Trigger: TCTTTGTACCCTTGGTTGTCCGCTATGTGGATCTCATGGAGTCTTCCATCGCCCAGTCAATTCACAGAGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000397721.4
ENST00000412584.6
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS CAA 90 bp AGGCTTCGGCCTGGTCTGTCTGAAGTTTTTCTCCTTCCACTTCCATaGTACAGTAAACAATTCGATTGGGAGCAACTGACTTCAGGCCTT +
Preference number: 6 (lower is better)
Translates to: RLRPGLSEVFLLPLP*YSKQFDWEQLTSGL
Trigger: AAGGCCTGAAGTCAGTTGCTCCCAATCGAATTGTTTACTGTACAATGGAAGTGGAAGGAGAAAAACTTCAGACAGACCAGGCCGAAGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000397721.4
ENST00000412584.6
ENST00000449022.7
ENST00000615869.4
CDS TCA 72 bp TTCTGCTGTAAGACTTCTATGCAGAGCTCTGCCAGATaGAGAATCTCTTCCAGCTTTCTAGCAGGAGATGCC +
Preference number: 6 (lower is better)
Translates to: FCCKTSMQSSAR*RISSSFLAGDA
Trigger: GGCATCTCCTGCTAGAAAGCTGGAAGAGATTCTTCATCTGGCAGAGCTCTGCATAGAAGTCTTACAGCAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000397721.4
ENST00000412584.6
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS GCA 72 bp TGCTCTAAGTGGTGGGCAAATTCCTGTTCTGGCCAGTaGAGATCAAAGACAAACATTTGCAGTGCATCAAGC +
Preference number: 6 (lower is better)
Translates to: CSKWWANSCSGQ*RSKTNICSASS
Trigger: GCTTGATGCACTGCAAATGTTTGTCTTTGATCTGCACTGGCCAGAACAGGAATTTGCCCACCACTTAGAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000397721.4
ENST00000412584.6
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS GCA 72 bp GCCTCTAGCATATCACTGGCCATTAGTTTAAGTCTTTaGTCTAAGTGGTGGGCAAATTCCTGTTCTGGCCAG +
Preference number: 6 (lower is better)
Translates to: ASSISLAISLSL*SKWWANSCSGQ
Trigger: CTGGCCAGAACAGGAATTTGCCCACCACTTAGAGCAAAGACTTAAACTAATGGCCAGTGATATGCTAGAGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000397721.4
ENST00000412584.6
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS CAA 90 bp TGCTCTTGTCCTCCATCCAGGGCACAGAGTTTGGTGCTTTGCTTTTaGGCATCGACTAATACATTAAACATAGTGCAAACGGAAGCTGGA +
Preference number: 6 (lower is better)
Translates to: CSCPPSRAQSLVLCF*ASTNTLNIVQTEAG
Trigger: TCCAGCTTCCGTTTGCACTATGTTTAATGTATTAGTCGATGCCAAAAAGCAAAGCACCAAACTCTGTGCCCTGGATGGAGGACAAGAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000397721.4
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS CAA 72 bp TCCGGACCACCTTTCGAAACTGGAAGACTTTCCAAATaGGCCATTAGCAAATTCACTGAAGACCGCAACTCT +
Preference number: 6 (lower is better)
Translates to: SGPPFETGRLSK*AISKFTEDRNS
Trigger: AGAGTTGCGGTCTTCAGTGAATTTGCTAATGGCCAATTTGGAAAGTCTTCCAGTTTCGAAAGGTGGTCCGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000615869.4
CDS CAA 90 bp AACTCTTGTCCTCCATCCAGGGCACAGAGTTTGGTGCTTTGCTTTTaGGCATCGACTAATACATTAAACATAGTGCAAACGGAAGCTGGA +
Preference number: 6 (lower is better)
Translates to: NSCPPSRAQSLVLCF*ASTNTLNIVQTEAG
Trigger: TCCAGCTTCCGTTTGCACTATGTTTAATGTATTAGTCGATGCCAAAAAGCAAAGCACCAAACTCTGTGCCCTGGATGGAGGACAAGAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412584.6
CDS CCA 72 bp CTCCTTCCACTTCCATTGTACAGTAAACAATTCGATTaGGAGCAACTGACTTCAGGCCTTGCACTTCCATTA +
Preference number: 6 (lower is better)
Translates to: LLPLPLYSKQFD*EQLTSGLALPL
Trigger: TAATGGAAGTGCAAGGCCTGAAGTCAGTTGCTCCCAATCGAATTGTTTACTGTACAATGGAAGTGGAAGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000397721.4
ENST00000412584.6
ENST00000449022.7
ENST00000615869.4
CDS CCA 72 bp AGATGCCTGGTTCATGGTCTCTGTTTCCTTTTCTGCTaGGCCTTCTATTTTGGCATATTCTGTGAGTCTAGT +
Preference number: 6 (lower is better)
Translates to: RCLVHGLCFLFC*AFYFGIFCESS
Trigger: ACTAGACTCACAGAATATGCCAAAATAGAAGGCCCAGCAGAAAAGGAAACAGAGACCATGAACCAGGCATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313070.11
ENST00000462699.5
ENST00000615869.4
CDS CCA 72 bp ATATCACTGGCCATTAGTTTAAGTCTTTGCTCTAAGTaGTGGGCAAATTCCTGTTCTGGCCAGTGCAGATCA +
Preference number: 6 (lower is better)
Translates to: ISLAISLSLCSK*WANSCSGQCRS
Trigger: TGATCTGCACTGGCCAGAACAGGAATTTGCCCACCACTTAGAGCAAAGACTTAAACTAATGGCCAGTGATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000397721.4
ENST00000412584.6
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS CAA 72 bp TCATATTTGGCTATCCATGAGCTCAACACTGTCTCTTaGCTCAAGCCATCTATTTCTGGCAAACTCCGCACA +
Preference number: 6 (lower is better)
Translates to: SYLAIHELNTVS*LKPSISGKLRT
Trigger: TGTGCGGAGTTTGCCAGAAATAGATGGCTTGAGCAAAGAGACAGTGTTGAGCTCATGGATAGCCAAATATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000615869.4
CDS CAA 72 bp CCTCCATCCAGGGCACAGAGTTTGGTGCTTTGCTTTTaGGCATCGACTAATACATTAAACATAGTGCAAACG +
Preference number: 6 (lower is better)
Translates to: PPSRAQSLVLCF*ASTNTLNIVQT
Trigger: CGTTTGCACTATGTTTAATGTATTAGTCGATGCCAAAAAGCAAAGCACCAAACTCTGTGCCCTGGATGGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000397721.4
ENST00000412584.6
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS GCA 72 bp AAAACGATCTGCATCTTTACCAGAAAGCTGAGCATCTaGATGGAGAGTTCCTCCTTTAGGATTCAGTTTCTG +
Preference number: 6 (lower is better)
Translates to: KTICIFTRKLSI*MESSSFRIQFL
Trigger: CAGAAACTGAATCCTAAAGGAGGAACTCTCCATGCAGATGCTCAGCTTTCTGGTAAAGATGCAGATCGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313070.11
ENST00000449022.7
CDS GCA 72 bp TCTTGTCCTCCATCCAGGGCACAGAGTTTGGTGCTTTaGTTTTTGGCATCGACTAATACATTAAACATAGTG +
Preference number: 6 (lower is better)
Translates to: SCPPSRAQSLVL*FLASTNTLNIV
Trigger: CACTATGTTTAATGTATTAGTCGATGCCAAAAAGCAAAGCACCAAACTCTGTGCCCTGGATGGAGGACAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000397721.4
ENST00000412584.6
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS CCA 72 bp ACAAGTCCTCTTCACCTCTGTAAATGGCATCATATTTaGCTATCCATGAGCTCAACACTGTCTCTTTGCTCA +
Preference number: 6 (lower is better)
Translates to: TSPLHLCKWHHI*LSMSSTLSLCS
Trigger: TGAGCAAAGAGACAGTGTTGAGCTCATGGATAGCCAAATATGATGCCATTTACAGAGGTGAAGAGGACTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000615869.4
CDS CAA 90 bp TTTGAATGGTACTGTTGCTCTTGTCCTCCATCCAGGGCACAGAGTTaGGTGCTTTGCTTTTTGGCATCGACTAATACATTAAACATAGTG +
Preference number: 6 (lower is better)
Translates to: FEWYCCSCPPSRAQS*VLCFLASTNTLNIV
Trigger: CACTATGTTTAATGTATTAGTCGATGCCAAAAAGCAAAGCACCAAACTCTGTGCCCTGGATGGAGGACAAGAGCAACAGTACCATTCAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000397721.4
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS TCA 72 bp TTCCATTGTACAGTAAACAATTCGATTGGGAGCAACTaGCTTCAGGCCTTGCACTTCCATTATGACAATCTC +
Preference number: 6 (lower is better)
Translates to: FHCTVNNSIGSN*LQALHFHYDNL
Trigger: GAGATTGTCATAATGGAAGTGCAAGGCCTGAAGTCAGTTGCTCCCAATCGAATTGTTTACTGTACAATGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000397721.4
ENST00000412584.6
ENST00000449022.7
ENST00000615869.4
CDS TCA 72 bp TTCTTTTACACTGTTGTCGATCAGATCATCTATTTTTaGATGGTACTGTTGCTCTTGTCCTCCATCCAGGGC +
Preference number: 6 (lower is better)
Translates to: FFYTVVDQIIYF*MVLLLLSSIQG
Trigger: GCCCTGGATGGAGGACAAGAGCAACAGTACCATTCAAAAATAGATGATCTGATCGACAACAGTGTAAAAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000397721.4
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS GCA 72 bp ATGTTTCTGAAAACGATCTGCATAAAGCTGAGCATCTaGATGGAGAGTTCCTCCTTTAGGATTCAGTTTCTG +
Preference number: 6 (lower is better)
Translates to: MFLKTICIKLSI*MESSSFRIQFL
Trigger: CAGAAACTGAATCCTAAAGGAGGAACTCTCCATGCAGATGCTCAGCTTTATGCAGATCGTTTTCAGAAACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397721.4
ENST00000412584.6
CDS CCA 72 bp GCTCAACACTGTCTCTTTGCTCAAGCCATCTATTTCTaGCAAACTCCGCACACGTTTTTCTATGTTTTTCTT +
Preference number: 6 (lower is better)
Translates to: AQHCLFAQAIYF*QTPHTFFYVFL
Trigger: AAGAAAAACATAGAAAAACGTGTGCGGAGTTTGCCAGAAATAGATGGCTTGAGCAAAGAGACAGTGTTGAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000615869.4
CDS TCA 72 bp GTTGGAGGTCTAATCTATCAGTCAACCACACGCAAATaGCTTTCATGGAACTGCTGTACCATTGATCAAATA +
Preference number: 6 (lower is better)
Translates to: VGGLIYQSTTRK*LSWNCCTIDQI
Trigger: TATTTGATCAATGGTACAGCAGTTCCATGAAAGTCATTTGCGTGTGGTTGACTGATAGATTAGACCTCCAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000397721.4
ENST00000412584.6
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS GCA 72 bp AATAAACTCATCCATACCATGTTTCTGAAAACGATCTaGATCTTTACCAGAAAGCTGAGCATCTGCATGGAG +
Preference number: 6 (lower is better)
Translates to: NKLIHTMFLKTI*IFTRKLSICME
Trigger: CTCCATGCAGATGCTCAGCTTTCTGGTAAAGATGCAGATCGTTTTCAGAAACATGGTATGGATGAGTTTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313070.11
ENST00000449022.7
CDS CCA 72 bp GAACTGGTTTATATGATTGACCTGTGGCCCTATACATaGCTTGAACCCATAATATTCTGTCCTGTTCATCAT +
Preference number: 6 (lower is better)
Translates to: ELVYMIDLWPYT*LEPIIFCPVHH
Trigger: ATGATGAACAGGACAGAATATTATGGGTTCAAGCCATGTATAGGGCCACAGGTCAATCATATAAACCAGTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000397721.4
ENST00000412584.6
ENST00000449022.7
ENST00000615869.4
CDS CAA 72 bp TTTCTTTTACACTGTTGTCGATCAGATCATCTATTTTaGAATGGTACTGTTGCTCTTGTCCTCCATCCAGGG +
Preference number: 6 (lower is better)
Translates to: FLLHCCRSDHLF*NGTVALVLHPG
Trigger: CCCTGGATGGAGGACAAGAGCAACAGTACCATTCAAAAATAGATGATCTGATCGACAACAGTGTAAAAGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000397721.4
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS CAA 90 bp AATTTAAATTCCGGACCACCTTTCGAAACTGGAAGACTTTCCAAATaGGCCATTAGCAAATTCACTGAAGACCGCAACTCTTCTATATAC +
Preference number: 6 (lower is better)
Translates to: NLNSGPPFETGRLSK*AISKFTEDRNSSIY
Trigger: GTATATAGAAGAGTTGCGGTCTTCAGTGAATTTGCTAATGGCCAATTTGGAAAGTCTTCCAGTTTCGAAAGGTGGTCCGGAATTTAAATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000412584.6
ENST00000449022.7
ENST00000615869.4
CDS GCA 72 bp ATCTTGGTTTTGCCGAACAAACATAATATAGGTGTCTaGCAGATCCATTCCTGGTTTTGGAACATCAACATA +
Preference number: 6 (lower is better)
Translates to: ILVLPNKHNIGV*QIHSWFWNINI
Trigger: TATGTTGATGTTCCAAAACCAGGAATGGATCTGGCAGACACCTATATTATGTTTGTTCGGCAAAACCAAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000313070.11
ENST00000334010.11
ENST00000397721.4
ENST00000412584.6
ENST00000449022.7
ENST00000462699.5
ENST00000615869.4
CDS TCA 72 bp TTCTTTTACACTGTTGTCGATCAGATCATCTATTTTTaGATGGTACTGTTGCCATTGACTACCAAACTCTTG +
Preference number: 6 (lower is better)
Translates to: FFYTVVDQIIYF*MVLLPLTTKLL
Trigger: CAAGAGTTTGGTAGTCAATGGCAACAGTACCATTCAAAAATAGATGATCTGATCGACAACAGTGTAAAAGAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000412584.6
CDS CAA 72 bp TTTCTTTTACACTGTTGTCGATCAGATCATCTATTTTaGAATGGTACTGTTGCCATTGACTACCAAACTCTT +
Preference number: 6 (lower is better)
Translates to: FLLHCCRSDHLF*NGTVAIDYQTL
Trigger: AAGAGTTTGGTAGTCAATGGCAACAGTACCATTCAAAAATAGATGATCTGATCGACAACAGTGTAAAAGAAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412584.6