RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CADPS (Homo sapiens)

Ensembl gene IDs: ENSG00000163618

Ensembl transcript IDs: ENST00000283269.13, ENST00000357948.7, ENST00000383710.9, ENST00000462768.1, ENST00000463002.2, ENST00000466621.2, ENST00000468271.5, ENST00000473635.5, ENST00000474560.1, ENST00000478408.1, ENST00000478434.4, ENST00000478570.5, ENST00000486172.1, ENST00000490353.2, ENST00000490424.1, ENST00000491424.5, ENST00000542833.1, ENST00000612439.4, ENST00000613879.4

Found 1042 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CACACATGTTCACATGAATGGAGAGGCACAGAAACAGGACACCACTaGAGCCGGGTCACACTGGTTCAGGAGCTCTCTGTCCCCAGTGTT +
Preference number: 1 (lower is better)
Translates to: HTCSHEWRGTETGHH*SRVTLVQELSVPSV
Trigger: AACACTGGGGACAGAGAGCTCCTGAACCAGTGTGACCCGGCTCCAGTGGTGTCCTGTTTCTGTGCCTCTCCATTCATGTGAACATGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490353.2
3UTR GCA 90 bp TCTGAGACTATAGGTGTTGGCGGATACCACTTCGTTTTGCTGGAATaGCCTTGCCACCCTTTCTGTACTTGCAAATGCTTTCTAGCCAAA +
Preference number: 1 (lower is better)
Translates to: SETIGVGGYHFVLLE*PCHPFCTCKCFLAK
Trigger: TTTGGCTAGAAAGCATTTGCAAGTACAGAAAGGGTGGCAAGGGCATTCCAGCAAAACGAAGTGGTATCCGCCAACACCTATAGTCTCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490353.2
3UTR GCA 90 bp TACCACTTCGTTTTGCTGGAATGCCCTTGCCACCCTTTCTGTACTTaGAAATGCTTTCTAGCCAAATTCAAGGGCCATTTTCAAGAGCCA +
Preference number: 1 (lower is better)
Translates to: YHFVLLECPCHPFCT*KCFLAKFKGHFQEP
Trigger: TGGCTCTTGAAAATGGCCCTTGAATTTGGCTAGAAAGCATTTGCAAGTACAGAAAGGGTGGCAAGGGCATTCCAGCAAAACGAAGTGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490353.2
3UTR GCA 90 bp ACTATAGGTGTTGGCGGATACCACTTCGTTTTGCTGGAATGCCCTTaGCACCCTTTCTGTACTTGCAAATGCTTTCTAGCCAAATTCAAG +
Preference number: 1 (lower is better)
Translates to: TIGVGGYHFVLLECP*HPFCTCKCFLAKFK
Trigger: CTTGAATTTGGCTAGAAAGCATTTGCAAGTACAGAAAGGGTGGCAAGGGCATTCCAGCAAAACGAAGTGGTATCCGCCAACACCTATAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490353.2
3UTR CCA 90 bp ACTGCGCGCTTGATGTTAAGTCATGATAGGATCGCCCCCTTGCCGTaGCAATTAAGAGAATCAATCCATTGGTATGTAGCCATCCTTTTT +
Preference number: 1 (lower is better)
Translates to: TARLMLSHDRIAPLP*QLRESIHWYVAILF
Trigger: AAAAAGGATGGCTACATACCAATGGATTGATTCTCTTAATTGCCACGGCAAGGGGGCGATCCTATCATGACTTAACATCAAGCGCGCAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
3UTR GCA 90 bp TTCGTTTTGCTGGAATGCCCTTGCCACCCTTTCTGTACTTGCAAATaGTTTCTAGCCAAATTCAAGGGCCATTTTCAAGAGCCATCTTCT +
Preference number: 1 (lower is better)
Translates to: FVLLECPCHPFCTCK*FLAKFKGHFQEPSS
Trigger: AGAAGATGGCTCTTGAAAATGGCCCTTGAATTTGGCTAGAAAGCATTTGCAAGTACAGAAAGGGTGGCAAGGGCATTCCAGCAAAACGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490353.2
3UTR GCA 90 bp GTTGACAGAAAATTCCTAATGGGTTTAACTAACAGACTAAGGACATaGACTGATTACAGGACTCTGTCCCAGCAGACTCTAGGACCAAAT +
Preference number: 1 (lower is better)
Translates to: VDRKFLMGLTNRLRT*TDYRTLSQQTLGPN
Trigger: ATTTGGTCCTAGAGTCTGCTGGGACAGAGTCCTGTAATCAGTGCATGTCCTTAGTCTGTTAGTTAAACCCATTAGGAATTTTCTGTCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
3UTR-3UTR TCA 90 bp CACAGAAACAGGACACCACTGGAGCCGGGTCACACTGGTTCAGGAGCTCTCTGTAATGTTCTCTTCCCCTaGAGCTTTCATTGGTATCCC +
Preference number: 2 (lower is better)
Translates to: HRNRTPLEPGHTGSGALCNVLFP*SFHWYP
Trigger: GGGATACCAATGAAAGCTTCAGGGGAAGAGAACATT...ACAGAGAGCTCCTGAACCAGTGTGACCCGGCTCCAGTGGTGTCCTGTTTCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490353.2
3UTR-3UTR GCA 90 bp CACAGAAACAGGACACCACTGGAGCCGGGTCACACTGGTTCAGGAGCTCTCTGTTCATTCACGTCACTTTaGAAGCTGGCACGGATTTAC +
Preference number: 2 (lower is better)
Translates to: HRNRTPLEPGHTGSGALCSFTSL*KLARIY
Trigger: GTAAATCCGTGCCAGCTTGCAAAGTGACGTGAATGA...ACAGAGAGCTCCTGAACCAGTGTGACCCGGCTCCAGTGGTGTCCTGTTTCTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490353.2
3UTR-3UTR GCA 90 bp AGGACACCACTGGAGCCGGGTCACACTGGTTCAGGAGCTCTCTGTCCCCAGTGTCACCCTTTCTGTACTTaGAAATGCTTTCTAGCCAAA +
Preference number: 2 (lower is better)
Translates to: RTPLEPGHTGSGALCPQCHPFCT*KCFLAK
Trigger: TTTGGCTAGAAAGCATTTGCAAGTACAGAAAGGGTG...ACACTGGGGACAGAGAGCTCCTGAACCAGTGTGACCCGGCTCCAGTGGTGTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490353.2
3UTR-3UTR TCA 90 bp GTTCACATGAATGGAGAGGCACAGAAACAGGACACCACTGGAGCCGGGTCACACAGAGATTGGGTACTGTaGCTCTTCAAGCACAAATCT +
Preference number: 2 (lower is better)
Translates to: VHMNGEAQKQDTTGAGSHRDWVL*LFKHKS
Trigger: AGATTTGTGCTTGAAGAGTCACAGTACCCAATCTCT...GTGTGACCCGGCTCCAGTGGTGTCCTGTTTCTGTGCCTCTCCATTCATGTGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490353.2
3UTR-3UTR GCA 90 bp GTTCACATGAATGGAGAGGCACAGAAACAGGACACCACTGGAGCCGGGTCACACTCAACAGAAGCAATCTaGAGTTTTCCCCAGAATGGA +
Preference number: 2 (lower is better)
Translates to: VHMNGEAQKQDTTGAGSHSTEAI*SFPQNG
Trigger: TCCATTCTGGGGAAAACTGCAGATTGCTTCTGTTGA...GTGTGACCCGGCTCCAGTGGTGTCCTGTTTCTGTGCCTCTCCATTCATGTGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490353.2
3UTR-3UTR TCA 90 bp ATCGCCCCCTTGCCGTGGCAATTAAGAGAATCAATCCATTGGTATGTAGCCATCACTAAGGACATGCACTaGTTACAGGACTCTGTCCCA +
Preference number: 2 (lower is better)
Translates to: IAPLPWQLRESIHWYVAITKDMH*LQDSVP
Trigger: TGGGACAGAGTCCTGTAATCAGTGCATGTCCTTAGT...GATGGCTACATACCAATGGATTGATTCTCTTAATTGCCACGGCAAGGGGGCGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
3UTR-3UTR TCA 90 bp AGTCATGATAGGATCGCCCCCTTGCCGTGGCAATTAAGAGAATCAATCCATTGGACTAAGGACATGCACTaGTTACAGGACTCTGTCCCA +
Preference number: 2 (lower is better)
Translates to: SHDRIAPLPWQLRESIHWTKDMH*LQDSVP
Trigger: TGGGACAGAGTCCTGTAATCAGTGCATGTCCTTAGT...CCAATGGATTGATTCTCTTAATTGCCACGGCAAGGGGGCGATCCTATCATGACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
3UTR-3UTR TCA 90 bp GTCATAAAAGTTTTTCACACACACACACACACACACACACGCACACACATGCACCCCCTGGAGATGATTTaGCATGGCACAAAGACGGGA +
Preference number: 2 (lower is better)
Translates to: VIKVFHTHTHTHTRTHMHPLEMI*HGTKTG
Trigger: TCCCGTCTTTGTGCCATGTCAAATCATCTCCAGGGG...GTGCATGTGTGTGCGTGTGTGTGTGTGTGTGTGTGTGTGAAAAACTTTTATGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000490353.2
3UTR CAA 90 bp TACAGCACTTCTGAGACTATAGGTGTTGGCGGATACCACTTCGTTTaGCTGGAATGCCCTTGCCACCCTTTCTGTACTTGCAAATGCTTT +
Preference number: 2 (lower is better)
Translates to: YSTSETIGVGGYHFV*LECPCHPFCTCKCF
Trigger: AAAGCATTTGCAAGTACAGAAAGGGTGGCAAGGGCATTCCAGCAAAACGAAGTGGTATCCGCCAACACCTATAGTCTCAGAAGTGCTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490353.2
3UTR-3UTR TCA 90 bp AGTCATGATAGGATCGCCCCCTTGCCGTGGCAATTAAGAGAATCAATCCATTGGTGGCATCCACATACGTaGAACAGAGTGAATGTACTT +
Preference number: 2 (lower is better)
Translates to: SHDRIAPLPWQLRESIHWWHPHT*NRVNVL
Trigger: AAGTACATTCACTCTGTTTCACGTATGTGGATGCCA...CCAATGGATTGATTCTCTTAATTGCCACGGCAAGGGGGCGATCCTATCATGACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
3UTR-3UTR GCA 90 bp AGTCATGATAGGATCGCCCCCTTGCCGTGGCAATTAAGAGAATCAATCCATTGGAACAGACTAAGGACATaGACTGATTACAGGACTCTG +
Preference number: 2 (lower is better)
Translates to: SHDRIAPLPWQLRESIHWNRLRT*TDYRTL
Trigger: CAGAGTCCTGTAATCAGTGCATGTCCTTAGTCTGTT...CCAATGGATTGATTCTCTTAATTGCCACGGCAAGGGGGCGATCCTATCATGACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
3UTR-3UTR CCA 90 bp GAAAGAAATAGCTCTGCAGCAAACCCCAGGGTTGTGCAGTTACAGATCAAAATGATCGCCCCCTTGCCGTaGCAATTAAGAGAATCAATC +
Preference number: 2 (lower is better)
Translates to: ERNSSAANPRVVQLQIKMIAPLP*QLRESI
Trigger: GATTGATTCTCTTAATTGCCACGGCAAGGGGGCGAT...CATTTTGATCTGTAACTGCACAACCCTGGGGTTTGCTGCAGAGCTATTTCTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
3UTR-3UTR CCA 90 bp ACTTCGTTTTGCTGGAATGCCCTTGCCACCCTTTCTGTACTTGCAAATGCTTTCCGTCACTTTGCAAGCTaGCACGGATTTACTAAACAG +
Preference number: 2 (lower is better)
Translates to: TSFCWNALATLSVLANAFRHFAS*HGFTKQ
Trigger: CTGTTTAGTAAATCCGTGCCAGCTTGCAAAGTGACG...GAAAGCATTTGCAAGTACAGAAAGGGTGGCAAGGGCATTCCAGCAAAACGAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490353.2
3UTR-3UTR TCA 90 bp GAAAGAAATAGCTCTGCAGCAAACCCCAGGGTTGTGCAGTTACAGATCAAAATGCATGGGCATGGTAGTTaGCAGAAAATTCCTAATGGG +
Preference number: 2 (lower is better)
Translates to: ERNSSAANPRVVQLQIKMHGHGS*QKIPNG
Trigger: CCCATTAGGAATTTTCTGTCAACTACCATGCCCATG...CATTTTGATCTGTAACTGCACAACCCTGGGGTTTGCTGCAGAGCTATTTCTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
3UTR-3UTR TCA 90 bp GTCATAAAAGTTTTTCACACACACACACACACACACACACGCACACACATGCACAAGTATGCTGCATCCTaGAAACAGGGTCTTTGCTCT +
Preference number: 2 (lower is better)
Translates to: VIKVFHTHTHTHTRTHMHKYAAS*KQGLCS
Trigger: AGAGCAAAGACCCTGTTTTCAGGATGCAGCATACTT...GTGCATGTGTGTGCGTGTGTGTGTGTGTGTGTGTGTGTGAAAAACTTTTATGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000490353.2
3UTR-3UTR TCA 90 bp GAAAGAAATAGCTCTGCAGCAAACCCCAGGGTTGTGCAGTTACAGATCAAAATGTGGCATCCACATACGTaGAACAGAGTGAATGTACTT +
Preference number: 2 (lower is better)
Translates to: ERNSSAANPRVVQLQIKMWHPHT*NRVNVL
Trigger: AAGTACATTCACTCTGTTTCACGTATGTGGATGCCA...CATTTTGATCTGTAACTGCACAACCCTGGGGTTTGCTGCAGAGCTATTTCTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
3UTR-3UTR GCA 90 bp GAAAGAAATAGCTCTGCAGCAAACCCCAGGGTTGTGCAGTTACAGATCAAAATGAACAGACTAAGGACATaGACTGATTACAGGACTCTG +
Preference number: 2 (lower is better)
Translates to: ERNSSAANPRVVQLQIKMNRLRT*TDYRTL
Trigger: CAGAGTCCTGTAATCAGTGCATGTCCTTAGTCTGTT...CATTTTGATCTGTAACTGCACAACCCTGGGGTTTGCTGCAGAGCTATTTCTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
3UTR-3UTR CCA 90 bp ACTTCGTTTTGCTGGAATGCCCTTGCCACCCTTTCTGTACTTGCAAATGCTTTCTCCAGGACCATTCTTTaGTTTTCTCAACAGAAGCAA +
Preference number: 2 (lower is better)
Translates to: TSFCWNALATLSVLANAFSRTIL*FSQQKQ
Trigger: TTGCTTCTGTTGAGAAAACCAAAGAATGGTCCTGGA...GAAAGCATTTGCAAGTACAGAAAGGGTGGCAAGGGCATTCCAGCAAAACGAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490353.2
3UTR-3UTR TCA 90 bp AATGTACTTGATGTACTTGCCCTCACATCCATTTACCACCAATGCATACATAGTACTAAGGACATGCACTaGTTACAGGACTCTGTCCCA +
Preference number: 2 (lower is better)
Translates to: NVLDVLALTSIYHQCIHSTKDMH*LQDSVP
Trigger: TGGGACAGAGTCCTGTAATCAGTGCATGTCCTTAGT...ACTATGTATGCATTGGTGGTAAATGGATGTGAGGGCAAGTACATCAAGTACATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
3UTR-3UTR TCA 90 bp CAAACCCCAGGGTTGTGCAGTTACAGATCAAAATGCAATGTACATGACAGATATCAGAGTGAATGTACTTaGTGTACTTGCCCTCACATC +
Preference number: 2 (lower is better)
Translates to: QTPGLCSYRSKCNVHDRYQSECT*CTCPHI
Trigger: GATGTGAGGGCAAGTACATCAAGTACATTCACTCTG...ATATCTGTCATGTACATTGCATTTTGATCTGTAACTGCACAACCCTGGGGTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
3UTR-3UTR TCA 90 bp GATACCACTTCGTTTTGCTGGAATGCCCTTGCCACCCTTTCTGTACTTGCAAATATTAACACGTTCACTTaGCATTTCATTCCGGTCATT +
Preference number: 2 (lower is better)
Translates to: DTTSFCWNALATLSVLANINTFT*HFIPVI
Trigger: AATGACCGGAATGAAATGTCAAGTGAACGTGTTAAT...ATTTGCAAGTACAGAAAGGGTGGCAAGGGCATTCCAGCAAAACGAAGTGGTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490353.2
3UTR-3UTR TCA 90 bp ATTGCTTGTAAACATATAGACATGGACATCAGGAAATCAGTGGATATGAAGGTCACTAAGGACATGCACTaGTTACAGGACTCTGTCCCA +
Preference number: 2 (lower is better)
Translates to: IACKHIDMDIRKSVDMKVTKDMH*LQDSVP
Trigger: TGGGACAGAGTCCTGTAATCAGTGCATGTCCTTAGT...GACCTTCATATCCACTGATTTCCTGATGTCCATGTCTATATGTTTACAAGCAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
3UTR CAA 90 bp CAGGGAAATACACAGACTATAGTGAAATTATTCAGTAAACAGAGATaGGGTACTGTGACTCTTCAAGCACAAATCTTGTACCCCTGGAGA +
Preference number: 2 (lower is better)
Translates to: QGNTQTIVKLFSKQR*GTVTLQAQILYPWR
Trigger: TCTCCAGGGGTACAAGATTTGTGCTTGAAGAGTCACAGTACCCAATCTCTGTTTACTGAATAATTTCACTATAGTCTGTGTATTTCCCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490353.2
3UTR-3UTR GCA 90 bp AATGTACTTGATGTACTTGCCCTCACATCCATTTACCACCAATGCATACATAGTAACAGACTAAGGACATaGACTGATTACAGGACTCTG +
Preference number: 2 (lower is better)
Translates to: NVLDVLALTSIYHQCIHSNRLRT*TDYRTL
Trigger: CAGAGTCCTGTAATCAGTGCATGTCCTTAGTCTGTT...ACTATGTATGCATTGGTGGTAAATGGATGTGAGGGCAAGTACATCAAGTACATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
3UTR-3UTR GCA 90 bp TTGATGTACTTGCCCTCACATCCATTTACCACCAATGCATACATAGTACATGAAAACAGACTAAGGACATaGACTGATTACAGGACTCTG +
Preference number: 2 (lower is better)
Translates to: LMYLPSHPFTTNAYIVHENRLRT*TDYRTL
Trigger: CAGAGTCCTGTAATCAGTGCATGTCCTTAGTCTGTT...TTCATGTACTATGTATGCATTGGTGGTAAATGGATGTGAGGGCAAGTACATCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
3UTR-3UTR GCA 90 bp GTCATAAAAGTTTTTCACACACACACACACACACACACACGCACACACATGCACTTCTGTACTTGCAAATaGTTTCTAGCCAAATTCAAG +
Preference number: 2 (lower is better)
Translates to: VIKVFHTHTHTHTRTHMHFCTCK*FLAKFK
Trigger: CTTGAATTTGGCTAGAAAGCATTTGCAAGTACAGAA...GTGCATGTGTGTGCGTGTGTGTGTGTGTGTGTGTGTGTGAAAAACTTTTATGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000490353.2
3UTR-3UTR CCA 90 bp GTCATAAAAGTTTTTCACACACACACACACACACACACACGCACACACATGCACACAGAAAAGAAACCATaGAATGCTCTAGGAAAAACA +
Preference number: 2 (lower is better)
Translates to: VIKVFHTHTHTHTRTHMHTEKKP*NALGKT
Trigger: TGTTTTTCCTAGAGCATTCCATGGTTTCTTTTCTGT...GTGCATGTGTGTGCGTGTGTGTGTGTGTGTGTGTGTGTGAAAAACTTTTATGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000490353.2
3UTR CAA 90 bp CACTACTTTACATGGAAAGAAATAGCTCTGCAGCAAACCCCAGGGTaGTGCAGTTACAGATCAAAATGCAATGTACATGACAGATATAAA +
Preference number: 2 (lower is better)
Translates to: HYFTWKEIALQQTPG*CSYRSKCNVHDRYK
Trigger: TTTATATCTGTCATGTACATTGCATTTTGATCTGTAACTGCACAACCCTGGGGTTTGCTGCAGAGCTATTTCTTTCCATGTAAAGTAGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
3UTR-3UTR TCA 90 bp TTGATGTACTTGCCCTCACATCCATTTACCACCAATGCATACATAGTACATGAAGGAAATCAGTGGATATaGAGGTCATTTGCTAATCTT +
Preference number: 2 (lower is better)
Translates to: LMYLPSHPFTTNAYIVHEGNQWI*RSFANL
Trigger: AAGATTAGCAAATGACCTTCATATCCACTGATTTCC...TTCATGTACTATGTATGCATTGGTGGTAAATGGATGTGAGGGCAAGTACATCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
3UTR-3UTR TCA 90 bp AATGTACTTGATGTACTTGCCCTCACATCCATTTACCACCAATGCATACATAGTGGAAATCAGTGGATATaGAGGTCATTTGCTAATCTT +
Preference number: 2 (lower is better)
Translates to: NVLDVLALTSIYHQCIHSGNQWI*RSFANL
Trigger: AAGATTAGCAAATGACCTTCATATCCACTGATTTCC...ACTATGTATGCATTGGTGGTAAATGGATGTGAGGGCAAGTACATCAAGTACATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
3UTR CAA 90 bp ACATTCAACAACATTACTAATTCCATCTTTCTCATTCACGTCACTTaGCAAGCTGGCACGGATTTACTAAACAGAAAAGAAACCATGGAA +
Preference number: 2 (lower is better)
Translates to: TFNNITNSIFLIHVT*QAGTDLLNRKETME
Trigger: TTCCATGGTTTCTTTTCTGTTTAGTAAATCCGTGCCAGCTTGCAAAGTGACGTGAATGAGAAAGATGGAATTAGTAATGTTGTTGAATGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490353.2
3UTR-3UTR GCA 90 bp TTCCATAACTGTAGGCTTTATATAAGGCAAAAGCAAGATGGATCCACTACTTTAACAGTAGTTTTGAACTaGGCGCTTGATGTTAAGTCA +
Preference number: 2 (lower is better)
Translates to: FHNCRLYIRQKQDGSTTLTVVLN*ALDVKS
Trigger: TGACTTAACATCAAGCGCGCAGTTCAAAACTACTGT...TAAAGTAGTGGATCCATCTTGCTTTTGCCTTATATAAAGCCTACAGTTATGGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
3UTR-3UTR TCA 90 bp TTCCATAACTGTAGGCTTTATATAAGGCAAAAGCAAGATGGATCCACTACTTTAGGAAATCAGTGGATATaGAGGTCATTTGCTAATCTT +
Preference number: 2 (lower is better)
Translates to: FHNCRLYIRQKQDGSTTLGNQWI*RSFANL
Trigger: AAGATTAGCAAATGACCTTCATATCCACTGATTTCC...TAAAGTAGTGGATCCATCTTGCTTTTGCCTTATATAAAGCCTACAGTTATGGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
3UTR CCA 72 bp GCACAGAAACAGGACACCACTGGAGCCGGGTCACACTaGTTCAGGAGCTCTCTGTCCCCAGTGTTTATCCTA +
Preference number: 3 (lower is better)
Translates to: AQKQDTTGAGSH*FRSSLSPVFIL
Trigger: TAGGATAAACACTGGGGACAGAGAGCTCCTGAACCAGTGTGACCCGGCTCCAGTGGTGTCCTGTTTCTGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490353.2
3UTR CCA 72 bp TCACATGAATGGAGAGGCACAGAAACAGGACACCACTaGAGCCGGGTCACACTGGTTCAGGAGCTCTCTGTC +
Preference number: 3 (lower is better)
Translates to: SHEWRGTETGHH*SRVTLVQELSV
Trigger: GACAGAGAGCTCCTGAACCAGTGTGACCCGGCTCCAGTGGTGTCCTGTTTCTGTGCCTCTCCATTCATGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490353.2
3UTR-3UTR CAA 90 bp AGGACACCACTGGAGCCGGGTCACACTGGTTCAGGAGCTCTCTGTCCCCAGTGTATTTCATTCCGGTCATaGAGAAGACAAAGCCAGCTA +
Preference number: 3 (lower is better)
Translates to: RTPLEPGHTGSGALCPQCISFRS*RRQSQL
Trigger: TAGCTGGCTTTGTCTTCTCAATGACCGGAATGAAAT...ACACTGGGGACAGAGAGCTCCTGAACCAGTGTGACCCGGCTCCAGTGGTGTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490353.2
3UTR GCA 72 bp GTTGGCGGATACCACTTCGTTTTGCTGGAATGCCCTTaGCACCCTTTCTGTACTTGCAAATGCTTTCTAGCC +
Preference number: 3 (lower is better)
Translates to: VGGYHFVLLECP*HPFCTCKCFLA
Trigger: GGCTAGAAAGCATTTGCAAGTACAGAAAGGGTGGCAAGGGCATTCCAGCAAAACGAAGTGGTATCCGCCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490353.2
3UTR-3UTR CAA 90 bp ACGTTCCCTACACAGTACAGCACTTCTGAGACTATAGGTGTTGGCGGATACCACCCACCCTTTCTGTACTaGCAAATGCTTTCTAGCCAA +
Preference number: 3 (lower is better)
Translates to: TFPTQYSTSETIGVGGYHPPFLY*QMLSSQ
Trigger: TTGGCTAGAAAGCATTTGCAAGTACAGAAAGGGTGG...GTGGTATCCGCCAACACCTATAGTCTCAGAAGTGCTGTACTGTGTAGGGAACGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490353.2
3UTR-3UTR CAA 90 bp ATCGCCCCCTTGCCGTGGCAATTAAGAGAATCAATCCATTGGTATGTAGCCATCATGTACTTGATGTACTaGCCCTCACATCCATTTACC +
Preference number: 3 (lower is better)
Translates to: IAPLPWQLRESIHWYVAIMYLMY*PSHPFT
Trigger: GGTAAATGGATGTGAGGGCAAGTACATCAAGTACAT...GATGGCTACATACCAATGGATTGATTCTCTTAATTGCCACGGCAAGGGGGCGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
3UTR-3UTR CAA 90 bp CAAACCCCAGGGTTGTGCAGTTACAGATCAAAATGCAATGTACATGACAGATATGATAGGATCGCCCCCTaGCCGTGGCAATTAAGAGAA +
Preference number: 3 (lower is better)
Translates to: QTPGLCSYRSKCNVHDRYDRIAP*PWQLRE
Trigger: TTCTCTTAATTGCCACGGCAAGGGGGCGATCCTATC...ATATCTGTCATGTACATTGCATTTTGATCTGTAACTGCACAACCCTGGGGTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
3UTR TCA 72 bp CTGGCATCCACATACGTGAAACAGAGTGAATGTACTTaGTGTACTTGCCCTCACATCCATTTACCACCAATG +
Preference number: 3 (lower is better)
Translates to: LASTYVKQSECT*CTCPHIHLPPM
Trigger: CATTGGTGGTAAATGGATGTGAGGGCAAGTACATCAAGTACATTCACTCTGTTTCACGTATGTGGATGCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
3UTR GCA 72 bp GTTTTGCTGGAATGCCCTTGCCACCCTTTCTGTACTTaGAAATGCTTTCTAGCCAAATTCAAGGGCCATTTT +
Preference number: 3 (lower is better)
Translates to: VLLECPCHPFCT*KCFLAKFKGHF
Trigger: AAAATGGCCCTTGAATTTGGCTAGAAAGCATTTGCAAGTACAGAAAGGGTGGCAAGGGCATTCCAGCAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490353.2
3UTR CCA 72 bp TTGATGTTAAGTCATGATAGGATCGCCCCCTTGCCGTaGCAATTAAGAGAATCAATCCATTGGTATGTAGCC +
Preference number: 3 (lower is better)
Translates to: LMLSHDRIAPLP*QLRESIHWYVA
Trigger: GGCTACATACCAATGGATTGATTCTCTTAATTGCCACGGCAAGGGGGCGATCCTATCATGACTTAACATCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
3UTR-3UTR CAA 90 bp ATCGCCCCCTTGCCGTGGCAATTAAGAGAATCAATCCATTGGTATGTAGCCATCAAAATGGCAGTTGTATaGATAAACATCTCATGGGCA +
Preference number: 3 (lower is better)
Translates to: IAPLPWQLRESIHWYVAIKMAVV*INISWA
Trigger: TGCCCATGAGATGTTTATCAATACAACTGCCATTTT...GATGGCTACATACCAATGGATTGATTCTCTTAATTGCCACGGCAAGGGGGCGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
3UTR-3UTR CAA 90 bp GAAAGAAATAGCTCTGCAGCAAACCCCAGGGTTGTGCAGTTACAGATCAAAATGATGTACTTGATGTACTaGCCCTCACATCCATTTACC +
Preference number: 3 (lower is better)
Translates to: ERNSSAANPRVVQLQIKMMYLMY*PSHPFT
Trigger: GGTAAATGGATGTGAGGGCAAGTACATCAAGTACAT...CATTTTGATCTGTAACTGCACAACCCTGGGGTTTGCTGCAGAGCTATTTCTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
3UTR CCA 72 bp TATAAGGCAAAAGCAAGATGGATCCACTACTTTACATaGAAAGAAATAGCTCTGCAGCAAACCCCAGGGTTG +
Preference number: 3 (lower is better)
Translates to: YKAKARWIHYFT*KEIALQQTPGL
Trigger: CAACCCTGGGGTTTGCTGCAGAGCTATTTCTTTCCATGTAAAGTAGTGGATCCATCTTGCTTTTGCCTTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
3UTR-3UTR CAA 90 bp CAGGGAAATACACAGACTATAGTGAAATTATTCAGTAAACAGAGATTGGGTACTACCCCTGGAGATGATTaGACATGGCACAAAGACGGG +
Preference number: 3 (lower is better)
Translates to: QGNTQTIVKLFSKQRLGTTPGDD*TWHKDG
Trigger: CCCGTCTTTGTGCCATGTCAAATCATCTCCAGGGGT...AGTACCCAATCTCTGTTTACTGAATAATTTCACTATAGTCTGTGTATTTCCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490353.2
3UTR-3UTR CAA 90 bp GAAAGAAATAGCTCTGCAGCAAACCCCAGGGTTGTGCAGTTACAGATCAAAATGAAAATGGCAGTTGTATaGATAAACATCTCATGGGCA +
Preference number: 3 (lower is better)
Translates to: ERNSSAANPRVVQLQIKMKMAVV*INISWA
Trigger: TGCCCATGAGATGTTTATCAATACAACTGCCATTTT...CATTTTGATCTGTAACTGCACAACCCTGGGGTTTGCTGCAGAGCTATTTCTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
3UTR-3UTR CAA 90 bp CAAACCCCAGGGTTGTGCAGTTACAGATCAAAATGCAATGTACATGACAGATATATGTACTTGATGTACTaGCCCTCACATCCATTTACC +
Preference number: 3 (lower is better)
Translates to: QTPGLCSYRSKCNVHDRYMYLMY*PSHPFT
Trigger: GGTAAATGGATGTGAGGGCAAGTACATCAAGTACAT...ATATCTGTCATGTACATTGCATTTTGATCTGTAACTGCACAACCCTGGGGTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
3UTR-3UTR CAA 90 bp TTCCATAACTGTAGGCTTTATATAAGGCAAAAGCAAGATGGATCCACTACTTTACAGCAAACCCCAGGGTaGTGCAGTTACAGATCAAAA +
Preference number: 3 (lower is better)
Translates to: FHNCRLYIRQKQDGSTTLQQTPG*CSYRSK
Trigger: TTTTGATCTGTAACTGCACAACCCTGGGGTTTGCTG...TAAAGTAGTGGATCCATCTTGCTTTTGCCTTATATAAAGCCTACAGTTATGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
3UTR-3UTR CAA 90 bp CAAACCCCAGGGTTGTGCAGTTACAGATCAAAATGCAATGTACATGACAGATATAAAATGGCAGTTGTATaGATAAACATCTCATGGGCA +
Preference number: 3 (lower is better)
Translates to: QTPGLCSYRSKCNVHDRYKMAVV*INISWA
Trigger: TGCCCATGAGATGTTTATCAATACAACTGCCATTTT...ATATCTGTCATGTACATTGCATTTTGATCTGTAACTGCACAACCCTGGGGTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
3UTR-3UTR CAA 90 bp CAAACCCCAGGGTTGTGCAGTTACAGATCAAAATGCAATGTACATGACAGATATATGAATGAAGCATCATaGATCTTTGCTGATAACAGG +
Preference number: 3 (lower is better)
Translates to: QTPGLCSYRSKCNVHDRYMNEAS*IFADNR
Trigger: CCTGTTATCAGCAAAGATCAATGATGCTTCATTCAT...ATATCTGTCATGTACATTGCATTTTGATCTGTAACTGCACAACCCTGGGGTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
3UTR-3UTR CAA 90 bp TCAACAACATTACTAATTCCATCTTTCTCATTCACGTCACTTTGCAAGCTGGCATTCAGTAAACAGAGATaGGGTACTGTGACTCTTCAA +
Preference number: 3 (lower is better)
Translates to: STTLLIPSFSFTSLCKLAFSKQR*GTVTLQ
Trigger: TTGAAGAGTCACAGTACCCAATCTCTGTTTACTGAA...TGCCAGCTTGCAAAGTGACGTGAATGAGAAAGATGGAATTAGTAATGTTGTTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490353.2
3UTR TCA 72 bp TTACGTACTCATTTAATTAACTGGCATCCACATACGTaGAACAGAGTGAATGTACTTGATGTACTTGCCCTC +
Preference number: 3 (lower is better)
Translates to: LRTHLINWHPHT*NRVNVLDVLAL
Trigger: GAGGGCAAGTACATCAAGTACATTCACTCTGTTTCACGTATGTGGATGCCAGTTAATTAAATGAGTACGTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
3UTR TCA 72 bp TCATTGGTATCCCCATTAAGAATTAACACGTTCACTTaGCATTTCATTCCGGTCATTGAGAAGACAAAGCCA +
Preference number: 3 (lower is better)
Translates to: SLVSPLRINTFT*HFIPVIEKTKP
Trigger: TGGCTTTGTCTTCTCAATGACCGGAATGAAATGTCAAGTGAACGTGTTAATTCTTAATGGGGATACCAATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490353.2
3UTR-3UTR CAA 90 bp TTGATGTACTTGCCCTCACATCCATTTACCACCAATGCATACATAGTACATGAAAAAATGGCAGTTGTATaGATAAACATCTCATGGGCA +
Preference number: 3 (lower is better)
Translates to: LMYLPSHPFTTNAYIVHEKMAVV*INISWA
Trigger: TGCCCATGAGATGTTTATCAATACAACTGCCATTTT...TTCATGTACTATGTATGCATTGGTGGTAAATGGATGTGAGGGCAAGTACATCAA
38% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
3UTR-3UTR CAA 90 bp AATGTACTTGATGTACTTGCCCTCACATCCATTTACCACCAATGCATACATAGTAAAATGGCAGTTGTATaGATAAACATCTCATGGGCA +
Preference number: 3 (lower is better)
Translates to: NVLDVLALTSIYHQCIHSKMAVV*INISWA
Trigger: TGCCCATGAGATGTTTATCAATACAACTGCCATTTT...ACTATGTATGCATTGGTGGTAAATGGATGTGAGGGCAAGTACATCAAGTACATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
3UTR-3UTR CAA 90 bp AATGTACTTGATGTACTTGCCCTCACATCCATTTACCACCAATGCATACATAGTATGAATGAAGCATCATaGATCTTTGCTGATAACAGG +
Preference number: 3 (lower is better)
Translates to: NVLDVLALTSIYHQCIHSMNEAS*IFADNR
Trigger: CCTGTTATCAGCAAAGATCAATGATGCTTCATTCAT...ACTATGTATGCATTGGTGGTAAATGGATGTGAGGGCAAGTACATCAAGTACATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
CDS-3UTR CCA 90 bp GAAACAGGACACCACTGGAGCCGGGTCACACTGGTTCAGGAGCTCTCTGTCCCCCCTCGCTGGTACGGCTaGGAGACAGGCGCGCGCCGG +
Preference number: 4 (lower is better)
Translates to: ETGHHWSRVTLVQELSVPPRWYG*ETGARR
Trigger: CCGGCGCGCGCCTGTCTCCCAGCCGTACCAGCGAGG...GGGGACAGAGAGCTCCTGAACCAGTGTGACCCGGCTCCAGTGGTGTCCTGTTTC
67% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000490353.2
CDS-3UTR TCA 90 bp ATCGCCCCCTTGCCGTGGCAATTAAGAGAATCAATCCATTGGTATGTAGCCATCCTCGGCCGCCGCGACTaGTCCTCTGCCCGGCGGTCG +
Preference number: 4 (lower is better)
Translates to: IAPLPWQLRESIHWYVAILGRRD*SSARRS
Trigger: CGACCGCCGGGCAGAGGATCAGTCGCGGCGGCCGAG...GATGGCTACATACCAATGGATTGATTCTCTTAATTGCCACGGCAAGGGGGCGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CCA 90 bp CACAGAAACAGGACACCACTGGAGCCGGGTCACACTGGTTCAGGAGCTCTCTGTGGAGCCGGGTCACACTaGTTCAGGAGCTCTCTGTCC +
Preference number: 4 (lower is better)
Translates to: HRNRTPLEPGHTGSGALCGAGSH*FRSSLS
Trigger: GGACAGAGAGCTCCTGAACCAGTGTGACCCGGCTCC...ACAGAGAGCTCCTGAACCAGTGTGACCCGGCTCCAGTGGTGTCCTGTTTCTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490353.2
CDS-3UTR TCA 90 bp AGGACACCACTGGAGCCGGGTCACACTGGTTCAGGAGCTCTCTGTCCCCAGTGTTCTCAATGTGCTTCTTaGAGACCTCCCGGGAGTCGT +
Preference number: 4 (lower is better)
Translates to: RTPLEPGHTGSGALCPQCSQCAS*RPPGSR
Trigger: ACGACTCCCGGGAGGTCTTCAAGAAGCACATTGAGA...ACACTGGGGACAGAGAGCTCCTGAACCAGTGTGACCCGGCTCCAGTGGTGTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490353.2
CDS-3UTR GCA 90 bp GTTGGCGGATACCACTTCGTTTTGCTGGAATGCCCTTGCCACCCTTTCTGTACTAATCAGCTCGGAGGCTaGGCTGGCTGTCATCCGGGC +
Preference number: 4 (lower is better)
Translates to: VGGYHFVLLECPCHPFCTNQLGG*AGCHPG
Trigger: GCCCGGATGACAGCCAGCGCAGCCTCCGAGCTGATT...AGTACAGAAAGGGTGGCAAGGGCATTCCAGCAAAACGAAGTGGTATCCGCCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490353.2
CDS-3UTR CCA 90 bp GAAAGAAATAGCTCTGCAGCAAACCCCAGGGTTGTGCAGTTACAGATCAAAATGCCTCGCTGGTACGGCTaGGAGACAGGCGCGCGCCGG +
Preference number: 4 (lower is better)
Translates to: ERNSSAANPRVVQLQIKMPRWYG*ETGARR
Trigger: CCGGCGCGCGCCTGTCTCCCAGCCGTACCAGCGAGG...CATTTTGATCTGTAACTGCACAACCCTGGGGTTTGCTGCAGAGCTATTTCTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CCA 90 bp AGGACACCACTGGAGCCGGGTCACACTGGTTCAGGAGCTCTCTGTCCCCAGTGTGCACGACATCTGACTTaGAGAGCTGGTTCTCACTCT +
Preference number: 4 (lower is better)
Translates to: RTPLEPGHTGSGALCPQCARHLT*RAGSHS
Trigger: AGAGTGAGAACCAGCTCTCCAAGTCAGATGTCGTGC...ACACTGGGGACAGAGAGCTCCTGAACCAGTGTGACCCGGCTCCAGTGGTGTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490353.2
CDS-3UTR GCA 90 bp ATGGGTTTAACTAACAGACTAAGGACATGCACTGATTACAGGACTCTGTCCCAGCCGCGACTGATCCTCTaGCCGGCGGTCGCGAGCTGG +
Preference number: 4 (lower is better)
Translates to: MGLTNRLRTCTDYRTLSQPRLIL*PAVASW
Trigger: CCAGCTCGCGACCGCCGGGCAGAGGATCAGTCGCGG...CTGGGACAGAGTCCTGTAATCAGTGCATGTCCTTAGTCTGTTAGTTAAACCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR GCA 90 bp GAAAGAAATAGCTCTGCAGCAAACCCCAGGGTTGTGCAGTTACAGATCAAAATGCCGCGACTGATCCTCTaGCCGGCGGTCGCGAGCTGG +
Preference number: 4 (lower is better)
Translates to: ERNSSAANPRVVQLQIKMPRLIL*PAVASW
Trigger: CCAGCTCGCGACCGCCGGGCAGAGGATCAGTCGCGG...CATTTTGATCTGTAACTGCACAACCCTGGGGTTTGCTGCAGAGCTATTTCTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR GCA 90 bp ATGGGTTTAACTAACAGACTAAGGACATGCACTGATTACAGGACTCTGTCCCAGAGGGAGCGAGAGCGCTaGTGCTCAGCCTCGGCCGCC +
Preference number: 4 (lower is better)
Translates to: MGLTNRLRTCTDYRTLSQRERER*CSASAA
Trigger: GGCGGCCGAGGCTGAGCAGCAGCGCTCTCGCTCCCT...CTGGGACAGAGTCCTGTAATCAGTGCATGTCCTTAGTCTGTTAGTTAAACCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR GCA 90 bp GAAACAGGACACCACTGGAGCCGGGTCACACTGGTTCAGGAGCTCTCTGTCCCCTTGACTGTCTGCAGCTaGTGTTTGCTGATCTTCTGC +
Preference number: 4 (lower is better)
Translates to: ETGHHWSRVTLVQELSVPLTVCS*CLLIFC
Trigger: GCAGAAGATCAGCAAACAGCAGCTGCAGACAGTCAA...GGGGACAGAGAGCTCCTGAACCAGTGTGACCCGGCTCCAGTGGTGTCCTGTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490353.2
CDS-3UTR GCA 90 bp ATCGCCCCCTTGCCGTGGCAATTAAGAGAATCAATCCATTGGTATGTAGCCATCGCTGTCATCCGGGCCTaGTGCTTCCGCGGGTCCTCT +
Preference number: 4 (lower is better)
Translates to: IAPLPWQLRESIHWYVAIAVIRA*CFRGSS
Trigger: AGAGGACCCGCGGAAGCAGCAGGCCCGGATGACAGC...GATGGCTACATACCAATGGATTGATTCTCTTAATTGCCACGGCAAGGGGGCGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CCA 90 bp AGTCATGATAGGATCGCCCCCTTGCCGTGGCAATTAAGAGAATCAATCCATTGGCAGCATAGTGGCGCCTaGGGAGCGGGGTCTCTGGAG +
Preference number: 4 (lower is better)
Translates to: SHDRIAPLPWQLRESIHWQHSGA*GAGSLE
Trigger: CTCCAGAGACCCCGCTCCCCAGGCGCCACTATGCTG...CCAATGGATTGATTCTCTTAATTGCCACGGCAAGGGGGCGATCCTATCATGACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CCA 90 bp GAAACAGGACACCACTGGAGCCGGGTCACACTGGTTCAGGAGCTCTCTGTCCCCAGATGGCATCAAATTTaGCCATCCAGGAGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: ETGHHWSRVTLVQELSVPRWHQI*PSRSSA
Trigger: TGCTGAGCTCCTGGATGGCCAAATTTGATGCCATCT...GGGGACAGAGAGCTCCTGAACCAGTGTGACCCGGCTCCAGTGGTGTCCTGTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490353.2
CDS-3UTR CCA 90 bp AGTCATGATAGGATCGCCCCCTTGCCGTGGCAATTAAGAGAATCAATCCATTGGGGAGAGGTGCGTCCGTaGACTCGAGGTGGGCAAGGG +
Preference number: 4 (lower is better)
Translates to: SHDRIAPLPWQLRESIHWGEVRP*TRGGQG
Trigger: CCCTTGCCCACCTCGAGTCCACGGACGCACCTCTCC...CCAATGGATTGATTCTCTTAATTGCCACGGCAAGGGGGCGATCCTATCATGACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR TCA 90 bp TTGATGTACTTGCCCTCACATCCATTTACCACCAATGCATACATAGTACATGAACTCGGCCGCCGCGACTaGTCCTCTGCCCGGCGGTCG +
Preference number: 4 (lower is better)
Translates to: LMYLPSHPFTTNAYIVHELGRRD*SSARRS
Trigger: CGACCGCCGGGCAGAGGATCAGTCGCGGCGGCCGAG...TTCATGTACTATGTATGCATTGGTGGTAAATGGATGTGAGGGCAAGTACATCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR TCA 90 bp TCTTGGTACCACATAGCTAAAATGGCAGTTGTATTGATAAACATCTCATGGGCACTCGGCCGCCGCGACTaGTCCTCTGCCCGGCGGTCG +
Preference number: 4 (lower is better)
Translates to: SWYHIAKMAVVLINISWALGRRD*SSARRS
Trigger: CGACCGCCGGGCAGAGGATCAGTCGCGGCGGCCGAG...TGCCCATGAGATGTTTATCAATACAACTGCCATTTTAGCTATGTGGTACCAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR TCA 90 bp GAAACAGGACACCACTGGAGCCGGGTCACACTGGTTCAGGAGCTCTCTGTCCCCAATTACCACCTCCAATaGGAAAGACAGCACGACATC +
Preference number: 4 (lower is better)
Translates to: ETGHHWSRVTLVQELSVPNYHLQ*ERQHDI
Trigger: GATGTCGTGCTGTCTTTCTCATTGGAGGTGGTAATT...GGGGACAGAGAGCTCCTGAACCAGTGTGACCCGGCTCCAGTGGTGTCCTGTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490353.2
CDS-3UTR TCA 90 bp ATCGCCCCCTTGCCGTGGCAATTAAGAGAATCAATCCATTGGTATGTAGCCATCCGCTGTCCTTCATGCTaGTGCCCTGCAGTCCCCCAC +
Preference number: 4 (lower is better)
Translates to: IAPLPWQLRESIHWYVAIRCPSC*CPAVPH
Trigger: GTGGGGGACTGCAGGGCATCAGCATGAAGGACAGCG...GATGGCTACATACCAATGGATTGATTCTCTTAATTGCCACGGCAAGGGGGCGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
CDS-3UTR GCA 90 bp ATCGCCCCCTTGCCGTGGCAATTAAGAGAATCAATCCATTGGTATGTAGCCATCGTCATCCGGGCCTGCTaGTTCCGCGGGTCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: IAPLPWQLRESIHWYVAIVIRAC*FRGSSS
Trigger: AGAAGAGGACCCGCGGAAGCAGCAGGCCCGGATGAC...GATGGCTACATACCAATGGATTGATTCTCTTAATTGCCACGGCAAGGGGGCGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR GCA 90 bp CACAGAAACAGGACACCACTGGAGCCGGGTCACACTGGTTCAGGAGCTCTCTGTTTGCTGGAATGCCCTTaGCACCCTTTCTGTACTTGC +
Preference number: 4 (lower is better)
Translates to: HRNRTPLEPGHTGSGALCLLECP*HPFCTC
Trigger: GCAAGTACAGAAAGGGTGGCAAGGGCATTCCAGCAA...ACAGAGAGCTCCTGAACCAGTGTGACCCGGCTCCAGTGGTGTCCTGTTTCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490353.2
CDS-3UTR CCA 90 bp AGTCATGATAGGATCGCCCCCTTGCCGTGGCAATTAAGAGAATCAATCCATTGGTTGGAGTGCAAAAGGTaGGGGGCGCTGGAGGCAGCC +
Preference number: 4 (lower is better)
Translates to: SHDRIAPLPWQLRESIHWLECKR*GALEAA
Trigger: GGCTGCCTCCAGCGCCCCCCACCTTTTGCACTCCAA...CCAATGGATTGATTCTCTTAATTGCCACGGCAAGGGGGCGATCCTATCATGACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CCA 90 bp ATCGCCCCCTTGCCGTGGCAATTAAGAGAATCAATCCATTGGTATGTAGCCATCCCGTGGCCCGATACATaGCCTGGACCCACAGGATGC +
Preference number: 4 (lower is better)
Translates to: IAPLPWQLRESIHWYVAIPWPDT*PGPTGC
Trigger: GCATCCTGTGGGTCCAGGCCATGTATCGGGCCACGG...GATGGCTACATACCAATGGATTGATTCTCTTAATTGCCACGGCAAGGGGGCGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR TCA 90 bp ATTGCTTGTAAACATATAGACATGGACATCAGGAAATCAGTGGATATGAAGGTCCTCGGCCGCCGCGACTaGTCCTCTGCCCGGCGGTCG +
Preference number: 4 (lower is better)
Translates to: IACKHIDMDIRKSVDMKVLGRRD*SSARRS
Trigger: CGACCGCCGGGCAGAGGATCAGTCGCGGCGGCCGAG...GACCTTCATATCCACTGATTTCCTGATGTCCATGTCTATATGTTTACAAGCAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR TCA 90 bp GAAAGAAATAGCTCTGCAGCAAACCCCAGGGTTGTGCAGTTACAGATCAAAATGGGGCACAGGCTTGTGTaGCTGCCCCGTGGCCCGATA +
Preference number: 4 (lower is better)
Translates to: ERNSSAANPRVVQLQIKMGHRLV*LPRGPI
Trigger: TATCGGGCCACGGGGCAGTCACACAAGCCTGTGCCC...CATTTTGATCTGTAACTGCACAACCCTGGGGTTTGCTGCAGAGCTATTTCTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR GCA 90 bp TCTTGGTACCACATAGCTAAAATGGCAGTTGTATTGATAAACATCTCATGGGCAGAGCGAGAGCGCTGCTaGTCAGCCTCGGCCGCCGCG +
Preference number: 4 (lower is better)
Translates to: SWYHIAKMAVVLINISWAERERC*SASAAA
Trigger: CGCGGCGGCCGAGGCTGAGCAGCAGCGCTCTCGCTC...TGCCCATGAGATGTTTATCAATACAACTGCCATTTTAGCTATGTGGTACCAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR GCA 90 bp AGTCATGATAGGATCGCCCCCTTGCCGTGGCAATTAAGAGAATCAATCCATTGGCTCCACTCTGAACCATaGGGGCCACACGGTCGCTCT +
Preference number: 4 (lower is better)
Translates to: SHDRIAPLPWQLRESIHWLHSEP*GPHGRS
Trigger: AGAGCGACCGTGTGGCCCGCATGGTTCAGAGTGGAG...CCAATGGATTGATTCTCTTAATTGCCACGGCAAGGGGGCGATCCTATCATGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR GCA 90 bp ATGGGTTTAACTAACAGACTAAGGACATGCACTGATTACAGGACTCTGTCCCAGGCTGTCATCCGGGCCTaGTGCTTCCGCGGGTCCTCT +
Preference number: 4 (lower is better)
Translates to: MGLTNRLRTCTDYRTLSQAVIRA*CFRGSS
Trigger: AGAGGACCCGCGGAAGCAGCAGGCCCGGATGACAGC...CTGGGACAGAGTCCTGTAATCAGTGCATGTCCTTAGTCTGTTAGTTAAACCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR GCA 90 bp CAAGAGCCATCTTCTCCAGGACCATTCTTTGGTTTTCTCAACAGAAGCAATCTGGCTGTCATCCGGGCCTaGTGCTTCCGCGGGTCCTCT +
Preference number: 4 (lower is better)
Translates to: QEPSSPGPFFGFLNRSNLAVIRA*CFRGSS
Trigger: AGAGGACCCGCGGAAGCAGCAGGCCCGGATGACAGC...CAGATTGCTTCTGTTGAGAAAACCAAAGAATGGTCCTGGAGAAGATGGCTCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490353.2
CDS-3UTR GCA 90 bp ATGGGTTTAACTAACAGACTAAGGACATGCACTGATTACAGGACTCTGTCCCAGGAGCCCGCAGCCGGATaGCATCTGCGGCTGCTGAAG +
Preference number: 4 (lower is better)
Translates to: MGLTNRLRTCTDYRTLSQEPAAG*HLRLLK
Trigger: CTTCAGCAGCCGCAGATGGCATCCGGCTGCGGGCTC...CTGGGACAGAGTCCTGTAATCAGTGCATGTCCTTAGTCTGTTAGTTAAACCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CCA 90 bp ATGGGTTTAACTAACAGACTAAGGACATGCACTGATTACAGGACTCTGTCCCAGCAGCATAGTGGCGCCTaGGGAGCGGGGTCTCTGGAG +
Preference number: 4 (lower is better)
Translates to: MGLTNRLRTCTDYRTLSQQHSGA*GAGSLE
Trigger: CTCCAGAGACCCCGCTCCCCAGGCGCCACTATGCTG...CTGGGACAGAGTCCTGTAATCAGTGCATGTCCTTAGTCTGTTAGTTAAACCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CCA 90 bp AATGTACTTGATGTACTTGCCCTCACATCCATTTACCACCAATGCATACATAGTCCTCGCTGGTACGGCTaGGAGACAGGCGCGCGCCGG +
Preference number: 4 (lower is better)
Translates to: NVLDVLALTSIYHQCIHSPRWYG*ETGARR
Trigger: CCGGCGCGCGCCTGTCTCCCAGCCGTACCAGCGAGG...ACTATGTATGCATTGGTGGTAAATGGATGTGAGGGCAAGTACATCAAGTACATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CCA 90 bp TTGATGTACTTGCCCTCACATCCATTTACCACCAATGCATACATAGTACATGAACCTCGCTGGTACGGCTaGGAGACAGGCGCGCGCCGG +
Preference number: 4 (lower is better)
Translates to: LMYLPSHPFTTNAYIVHEPRWYG*ETGARR
Trigger: CCGGCGCGCGCCTGTCTCCCAGCCGTACCAGCGAGG...TTCATGTACTATGTATGCATTGGTGGTAAATGGATGTGAGGGCAAGTACATCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CCA 90 bp CACAGAAACAGGACACCACTGGAGCCGGGTCACACTGGTTCAGGAGCTCTCTGTCGTTCCCTGGCTATTTaGTCTGCCATTTGTAGACGT +
Preference number: 4 (lower is better)
Translates to: HRNRTPLEPGHTGSGALCRSLAI*SAICRR
Trigger: ACGTCTACAAATGGCAGACCAAATAGCCAGGGAACG...ACAGAGAGCTCCTGAACCAGTGTGACCCGGCTCCAGTGGTGTCCTGTTTCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490353.2
CDS-3UTR CCA 90 bp GAAACAGGACACCACTGGAGCCGGGTCACACTGGTTCAGGAGCTCTCTGTCCCCCTTTGGATACAAACTTaGGAAATTTGCGTTCCCTGG +
Preference number: 4 (lower is better)
Translates to: ETGHHWSRVTLVQELSVPLWIQT*EICVPW
Trigger: CCAGGGAACGCAAATTTCCCAAGTTTGTATCCAAAG...GGGGACAGAGAGCTCCTGAACCAGTGTGACCCGGCTCCAGTGGTGTCCTGTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000490353.2
CDS-3UTR CCA 90 bp ATCGCCCCCTTGCCGTGGCAATTAAGAGAATCAATCCATTGGTATGTAGCCATCGCCACCCTCCAAACCTaGCTGGGGGTCGGTGTAATC +
Preference number: 4 (lower is better)
Translates to: IAPLPWQLRESIHWYVAIATLQT*LGVGVI
Trigger: GATTACACCGACCCCCAGCCAGGTTTGGAGGGTGGC...GATGGCTACATACCAATGGATTGATTCTCTTAATTGCCACGGCAAGGGGGCGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CCA 90 bp AGTCATGATAGGATCGCCCCCTTGCCGTGGCAATTAAGAGAATCAATCCATTGGGCCACCCTCCAAACCTaGCTGGGGGTCGGTGTAATC +
Preference number: 4 (lower is better)
Translates to: SHDRIAPLPWQLRESIHWATLQT*LGVGVI
Trigger: GATTACACCGACCCCCAGCCAGGTTTGGAGGGTGGC...CCAATGGATTGATTCTCTTAATTGCCACGGCAAGGGGGCGATCCTATCATGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CCA 90 bp AGTCATGATAGGATCGCCCCCTTGCCGTGGCAATTAAGAGAATCAATCCATTGGGCCCGATACATGGCCTaGACCCACAGGATGCGGTCT +
Preference number: 4 (lower is better)
Translates to: SHDRIAPLPWQLRESIHWARYMA*THRMRS
Trigger: AGACCGCATCCTGTGGGTCCAGGCCATGTATCGGGC...CCAATGGATTGATTCTCTTAATTGCCACGGCAAGGGGGCGATCCTATCATGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CCA 90 bp GTTCACATGAATGGAGAGGCACAGAAACAGGACACCACTGGAGCCGGGTCACACTCTCCTGATTACCGTTaGTTTAGAAGCCTCGGCCTG +
Preference number: 4 (lower is better)
Translates to: VHMNGEAQKQDTTGAGSHSPDYR*FRSLGL
Trigger: CAGGCCGAGGCTTCTAAACCAACGGTAATCAGGAGA...GTGTGACCCGGCTCCAGTGGTGTCCTGTTTCTGTGCCTCTCCATTCATGTGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490353.2
CDS-3UTR CCA 90 bp GTTGGCGGATACCACTTCGTTTTGCTGGAATGCCCTTGCCACCCTTTCTGTACTGAAACAGGACACCACTaGAGCCGGGTCACACTGGTT +
Preference number: 4 (lower is better)
Translates to: VGGYHFVLLECPCHPFCTETGHH*SRVTLV
Trigger: AACCAGTGTGACCCGGCTCCAGTGGTGTCCTGTTTC...AGTACAGAAAGGGTGGCAAGGGCATTCCAGCAAAACGAAGTGGTATCCGCCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490353.2
CDS-3UTR TCA 90 bp AGTCATGATAGGATCGCCCCCTTGCCGTGGCAATTAAGAGAATCAATCCATTGGGCACAGTCTCCTTGCTaGGGCCGTCAATCTCAGGCA +
Preference number: 4 (lower is better)
Translates to: SHDRIAPLPWQLRESIHWAQSPC*GRQSQA
Trigger: TGCCTGAGATTGACGGCCTCAGCAAGGAGACTGTGC...CCAATGGATTGATTCTCTTAATTGCCACGGCAAGGGGGCGATCCTATCATGACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR TCA 90 bp ATGGGTTTAACTAACAGACTAAGGACATGCACTGATTACAGGACTCTGTCCCAGCGCTGTCCTTCATGCTaGTGCCCTGCAGTCCCCCAC +
Preference number: 4 (lower is better)
Translates to: MGLTNRLRTCTDYRTLSQRCPSC*CPAVPH
Trigger: GTGGGGGACTGCAGGGCATCAGCATGAAGGACAGCG...CTGGGACAGAGTCCTGTAATCAGTGCATGTCCTTAGTCTGTTAGTTAAACCCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
CDS-3UTR TCA 90 bp GAAAGAAATAGCTCTGCAGCAAACCCCAGGGTTGTGCAGTTACAGATCAAAATGCGCTGTCCTTCATGCTaGTGCCCTGCAGTCCCCCAC +
Preference number: 4 (lower is better)
Translates to: ERNSSAANPRVVQLQIKMRCPSC*CPAVPH
Trigger: GTGGGGGACTGCAGGGCATCAGCATGAAGGACAGCG...CATTTTGATCTGTAACTGCACAACCCTGGGGTTTGCTGCAGAGCTATTTCTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
CDS-3UTR GCA 90 bp AATGTACTTGATGTACTTGCCCTCACATCCATTTACCACCAATGCATACATAGTCCGCGACTGATCCTCTaGCCGGCGGTCGCGAGCTGG +
Preference number: 4 (lower is better)
Translates to: NVLDVLALTSIYHQCIHSPRLIL*PAVASW
Trigger: CCAGCTCGCGACCGCCGGGCAGAGGATCAGTCGCGG...ACTATGTATGCATTGGTGGTAAATGGATGTGAGGGCAAGTACATCAAGTACATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR GCA 90 bp TCTTGGTACCACATAGCTAAAATGGCAGTTGTATTGATAAACATCTCATGGGCACCGCGACTGATCCTCTaGCCGGCGGTCGCGAGCTGG +
Preference number: 4 (lower is better)
Translates to: SWYHIAKMAVVLINISWAPRLIL*PAVASW
Trigger: CCAGCTCGCGACCGCCGGGCAGAGGATCAGTCGCGG...TGCCCATGAGATGTTTATCAATACAACTGCCATTTTAGCTATGTGGTACCAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR GCA 90 bp TTGATGTACTTGCCCTCACATCCATTTACCACCAATGCATACATAGTACATGAAAGGGAGCGAGAGCGCTaGTGCTCAGCCTCGGCCGCC +
Preference number: 4 (lower is better)
Translates to: LMYLPSHPFTTNAYIVHERERER*CSASAA
Trigger: GGCGGCCGAGGCTGAGCAGCAGCGCTCTCGCTCCCT...TTCATGTACTATGTATGCATTGGTGGTAAATGGATGTGAGGGCAAGTACATCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR GCA 90 bp GTCATAAAAGTTTTTCACACACACACACACACACACACACGCACACACATGCACAGCCGAGCACCTCCTTaGCGCTCTCCTCCTCCACGA +
Preference number: 4 (lower is better)
Translates to: VIKVFHTHTHTHTRTHMHSRAPP*RSPPPR
Trigger: TCGTGGAGGAGGAGAGCGGCAAGGAGGTGCTCGGCT...GTGCATGTGTGTGCGTGTGTGTGTGTGTGTGTGTGTGTGAAAAACTTTTATGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000490353.2
CDS-3UTR GCA 90 bp ATGGGTTTAACTAACAGACTAAGGACATGCACTGATTACAGGACTCTGTCCCAGAGCCGAGCACCTCCTTaGCGCTCTCCTCCTCCACGA +
Preference number: 4 (lower is better)
Translates to: MGLTNRLRTCTDYRTLSQSRAPP*RSPPPR
Trigger: TCGTGGAGGAGGAGAGCGGCAAGGAGGTGCTCGGCT...CTGGGACAGAGTCCTGTAATCAGTGCATGTCCTTAGTCTGTTAGTTAAACCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR GCA 90 bp AGTCATGATAGGATCGCCCCCTTGCCGTGGCAATTAAGAGAATCAATCCATTGGTTGCTGATCTTCTGCTaGCGGCGAGCCATGTCGGTG +
Preference number: 4 (lower is better)
Translates to: SHDRIAPLPWQLRESIHWLLIFC*RRAMSV
Trigger: CACCGACATGGCTCGCCGGCAGCAGAAGATCAGCAA...CCAATGGATTGATTCTCTTAATTGCCACGGCAAGGGGGCGATCCTATCATGACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR GCA 90 bp ATGGGTTTAACTAACAGACTAAGGACATGCACTGATTACAGGACTCTGTCCCAGAATCAGCTCGGAGGCTaGGCTGGCTGTCATCCGGGC +
Preference number: 4 (lower is better)
Translates to: MGLTNRLRTCTDYRTLSQNQLGG*AGCHPG
Trigger: GCCCGGATGACAGCCAGCGCAGCCTCCGAGCTGATT...CTGGGACAGAGTCCTGTAATCAGTGCATGTCCTTAGTCTGTTAGTTAAACCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR GCA 90 bp ATCGCCCCCTTGCCGTGGCAATTAAGAGAATCAATCCATTGGTATGTAGCCATCACAGGCTTGTGTGACTaGCCCGTGGCCCGATACATG +
Preference number: 4 (lower is better)
Translates to: IAPLPWQLRESIHWYVAITGLCD*PVARYM
Trigger: CATGTATCGGGCCACGGGGCAGTCACACAAGCCTGT...GATGGCTACATACCAATGGATTGATTCTCTTAATTGCCACGGCAAGGGGGCGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR GCA 90 bp GAAAGAAATAGCTCTGCAGCAAACCCCAGGGTTGTGCAGTTACAGATCAAAATGAGGGGGAGAATCAATTaGGAGCCCCGAGCCCGCAGC +
Preference number: 4 (lower is better)
Translates to: ERNSSAANPRVVQLQIKMRGRIN*EPRARS
Trigger: GCTGCGGGCTCGGGGCTCGCAATTGATTCTCCCCCT...CATTTTGATCTGTAACTGCACAACCCTGGGGTTTGCTGCAGAGCTATTTCTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR GCA 90 bp ATGGGTTTAACTAACAGACTAAGGACATGCACTGATTACAGGACTCTGTCCCAGAGGGGGAGAATCAATTaGGAGCCCCGAGCCCGCAGC +
Preference number: 4 (lower is better)
Translates to: MGLTNRLRTCTDYRTLSQRGRIN*EPRARS
Trigger: GCTGCGGGCTCGGGGCTCGCAATTGATTCTCCCCCT...CTGGGACAGAGTCCTGTAATCAGTGCATGTCCTTAGTCTGTTAGTTAAACCCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CCA 90 bp AATGTACTTGATGTACTTGCCCTCACATCCATTTACCACCAATGCATACATAGTCCGGCGGTCGCGAGCTaGGCTCAGACCCAGAAGCGC +
Preference number: 4 (lower is better)
Translates to: NVLDVLALTSIYHQCIHSPAVAS*AQTQKR
Trigger: GCGCTTCTGGGTCTGAGCCCAGCTCGCGACCGCCGG...ACTATGTATGCATTGGTGGTAAATGGATGTGAGGGCAAGTACATCAAGTACATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CCA 90 bp TTGATGTACTTGCCCTCACATCCATTTACCACCAATGCATACATAGTACATGAACCGGCGGTCGCGAGCTaGGCTCAGACCCAGAAGCGC +
Preference number: 4 (lower is better)
Translates to: LMYLPSHPFTTNAYIVHEPAVAS*AQTQKR
Trigger: GCGCTTCTGGGTCTGAGCCCAGCTCGCGACCGCCGG...TTCATGTACTATGTATGCATTGGTGGTAAATGGATGTGAGGGCAAGTACATCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CCA 90 bp TTGATGTACTTGCCCTCACATCCATTTACCACCAATGCATACATAGTACATGAACGGCCGAGCCCTCGCTaGTACGGCTGGGAGACAGGC +
Preference number: 4 (lower is better)
Translates to: LMYLPSHPFTTNAYIVHERPSPR*YGWETG
Trigger: GCCTGTCTCCCAGCCGTACCAGCGAGGGCTCGGCCG...TTCATGTACTATGTATGCATTGGTGGTAAATGGATGTGAGGGCAAGTACATCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CCA 90 bp TCTTGGTACCACATAGCTAAAATGGCAGTTGTATTGATAAACATCTCATGGGCACGGCCGAGCCCTCGCTaGTACGGCTGGGAGACAGGC +
Preference number: 4 (lower is better)
Translates to: SWYHIAKMAVVLINISWARPSPR*YGWETG
Trigger: GCCTGTCTCCCAGCCGTACCAGCGAGGGCTCGGCCG...TGCCCATGAGATGTTTATCAATACAACTGCCATTTTAGCTATGTGGTACCAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CCA 90 bp AATGTACTTGATGTACTTGCCCTCACATCCATTTACCACCAATGCATACATAGTCGGCCGAGCCCTCGCTaGTACGGCTGGGAGACAGGC +
Preference number: 4 (lower is better)
Translates to: NVLDVLALTSIYHQCIHSRPSPR*YGWETG
Trigger: GCCTGTCTCCCAGCCGTACCAGCGAGGGCTCGGCCG...ACTATGTATGCATTGGTGGTAAATGGATGTGAGGGCAAGTACATCAAGTACATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CCA 90 bp ATCGCCCCCTTGCCGTGGCAATTAAGAGAATCAATCCATTGGTATGTAGCCATCGGCTGCTTGCTCATCTaGATTGTCCAGCTGGCAGGC +
Preference number: 4 (lower is better)
Translates to: IAPLPWQLRESIHWYVAIGCLLI*IVQLAG
Trigger: GCCTGCCAGCTGGACAATCCAGATGAGCAAGCAGCC...GATGGCTACATACCAATGGATTGATTCTCTTAATTGCCACGGCAAGGGGGCGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CCA 90 bp ATGGGTTTAACTAACAGACTAAGGACATGCACTGATTACAGGACTCTGTCCCAGCCGTGGCCCGATACATaGCCTGGACCCACAGGATGC +
Preference number: 4 (lower is better)
Translates to: MGLTNRLRTCTDYRTLSQPWPDT*PGPTGC
Trigger: GCATCCTGTGGGTCCAGGCCATGTATCGGGCCACGG...CTGGGACAGAGTCCTGTAATCAGTGCATGTCCTTAGTCTGTTAGTTAAACCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR TCA 90 bp AGTCATGATAGGATCGCCCCCTTGCCGTGGCAATTAAGAGAATCAATCCATTGGCGCCTGTGCTCTCTGTaGACAGCTTCACCTTCACAG +
Preference number: 4 (lower is better)
Translates to: SHDRIAPLPWQLRESIHWRLCSL*TASPSQ
Trigger: CTGTGAAGGTGAAGCTGTTCACAGAGAGCACAGGCG...CCAATGGATTGATTCTCTTAATTGCCACGGCAAGGGGGCGATCCTATCATGACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR TCA 90 bp CAAACCCCAGGGTTGTGCAGTTACAGATCAAAATGCAATGTACATGACAGATATGGGCACAGGCTTGTGTaGCTGCCCCGTGGCCCGATA +
Preference number: 4 (lower is better)
Translates to: QTPGLCSYRSKCNVHDRYGHRLV*LPRGPI
Trigger: TATCGGGCCACGGGGCAGTCACACAAGCCTGTGCCC...ATATCTGTCATGTACATTGCATTTTGATCTGTAACTGCACAACCCTGGGGTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR TCA 90 bp AGTCATGATAGGATCGCCCCCTTGCCGTGGCAATTAAGAGAATCAATCCATTGGAGTGCAGGTCCCGAATaGAGGTCTGAAGGGCGTCAA +
Preference number: 4 (lower is better)
Translates to: SHDRIAPLPWQLRESIHWSAGPE*RSEGRQ
Trigger: TTGACGCCCTTCAGACCTTCATTCGGGACCTGCACT...CCAATGGATTGATTCTCTTAATTGCCACGGCAAGGGGGCGATCCTATCATGACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
CDS-3UTR TCA 90 bp ATCGCCCCCTTGCCGTGGCAATTAAGAGAATCAATCCATTGGTATGTAGCCATCAGTGCAGGTCCCGAATaGAGGTCTGAAGGGCGTCAA +
Preference number: 4 (lower is better)
Translates to: IAPLPWQLRESIHWYVAISAGPE*RSEGRQ
Trigger: TTGACGCCCTTCAGACCTTCATTCGGGACCTGCACT...GATGGCTACATACCAATGGATTGATTCTCTTAATTGCCACGGCAAGGGGGCGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
CDS-3UTR TCA 90 bp ATCGCCCCCTTGCCGTGGCAATTAAGAGAATCAATCCATTGGTATGTAGCCATCTCACGCAGGACATCCTaGGAATGGCGGACGAAAGTC +
Preference number: 4 (lower is better)
Translates to: IAPLPWQLRESIHWYVAISRRTS*EWRTKV
Trigger: GACTTTCGTCCGCCATTCTCAGGATGTCCTGCGTGA...GATGGCTACATACCAATGGATTGATTCTCTTAATTGCCACGGCAAGGGGGCGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
CDS-3UTR TCA 90 bp AGTCATGATAGGATCGCCCCCTTGCCGTGGCAATTAAGAGAATCAATCCATTGGTCACGCAGGACATCCTaGGAATGGCGGACGAAAGTC +
Preference number: 4 (lower is better)
Translates to: SHDRIAPLPWQLRESIHWSRRTS*EWRTKV
Trigger: GACTTTCGTCCGCCATTCTCAGGATGTCCTGCGTGA...CCAATGGATTGATTCTCTTAATTGCCACGGCAAGGGGGCGATCCTATCATGACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
CDS-3UTR TCA 90 bp ATCGCCCCCTTGCCGTGGCAATTAAGAGAATCAATCCATTGGTATGTAGCCATCTGGCTTCCTCCACAGTaGGACGGTTCCGGATCGTTT +
Preference number: 4 (lower is better)
Translates to: IAPLPWQLRESIHWYVAIWLPPQ*DGSGSF
Trigger: AAACGATCCGGAACCGTCTCACTGTGGAGGAAGCCA...GATGGCTACATACCAATGGATTGATTCTCTTAATTGCCACGGCAAGGGGGCGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
CDS-3UTR TCA 90 bp GTTCACATGAATGGAGAGGCACAGAAACAGGACACCACTGGAGCCGGGTCACACAAGTATGCTGCATCCTaGAAACAGGGTCTTTGCTCT +
Preference number: 4 (lower is better)
Translates to: VHMNGEAQKQDTTGAGSHKYAAS*KQGLCS
Trigger: AGAGCAAAGACCCTGTTTTCAGGATGCAGCATACTT...GTGTGACCCGGCTCCAGTGGTGTCCTGTTTCTGTGCCTCTCCATTCATGTGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490353.2
CDS-3UTR GCA 90 bp ATTGCTTGTAAACATATAGACATGGACATCAGGAAATCAGTGGATATGAAGGTCAGGGAGCGAGAGCGCTaGTGCTCAGCCTCGGCCGCC +
Preference number: 4 (lower is better)
Translates to: IACKHIDMDIRKSVDMKVRERER*CSASAA
Trigger: GGCGGCCGAGGCTGAGCAGCAGCGCTCTCGCTCCCT...GACCTTCATATCCACTGATTTCCTGATGTCCATGTCTATATGTTTACAAGCAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR GCA 90 bp AGTCATGATAGGATCGCCCCCTTGCCGTGGCAATTAAGAGAATCAATCCATTGGTTCATGCTGATGCCCTaGAGTCCCCCACCTTCACTC +
Preference number: 4 (lower is better)
Translates to: SHDRIAPLPWQLRESIHWFMLMP*SPPPSL
Trigger: GAGTGAAGGTGGGGGACTGCAGGGCATCAGCATGAA...CCAATGGATTGATTCTCTTAATTGCCACGGCAAGGGGGCGATCCTATCATGACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
CDS-3UTR CCA 90 bp CTGTACTTGCAAATGCTTTCTAGCCAAATTCAAGGGCCATTTTCAAGAGCCATCCCTCCCGGGAGTCGTTaGCGGAACAGCCTCCACTCT +
Preference number: 4 (lower is better)
Translates to: LYLQMLSSQIQGPFSRAIPPGSR*RNSLHS
Trigger: AGAGTGGAGGCTGTTCCGCCAACGACTCCCGGGAGG...GATGGCTCTTGAAAATGGCCCTTGAATTTGGCTAGAAAGCATTTGCAAGTACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490353.2
CDS-3UTR CCA 90 bp ATCGCCCCCTTGCCGTGGCAATTAAGAGAATCAATCCATTGGTATGTAGCCATCTCTGACTTGGAGAGCTaGTTCTCACTCTCCTCGCCC +
Preference number: 4 (lower is better)
Translates to: IAPLPWQLRESIHWYVAISDLES*FSLSSP
Trigger: GGGCGAGGAGAGTGAGAACCAGCTCTCCAAGTCAGA...GATGGCTACATACCAATGGATTGATTCTCTTAATTGCCACGGCAAGGGGGCGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CCA 90 bp AGTCATGATAGGATCGCCCCCTTGCCGTGGCAATTAAGAGAATCAATCCATTGGTCTGACTTGGAGAGCTaGTTCTCACTCTCCTCGCCC +
Preference number: 4 (lower is better)
Translates to: SHDRIAPLPWQLRESIHWSDLES*FSLSSP
Trigger: GGGCGAGGAGAGTGAGAACCAGCTCTCCAAGTCAGA...CCAATGGATTGATTCTCTTAATTGCCACGGCAAGGGGGCGATCCTATCATGACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CCA 90 bp ATGGGTTTAACTAACAGACTAAGGACATGCACTGATTACAGGACTCTGTCCCAGTGTGTGACTGCCCCGTaGCCCGATACATGGCCTGGA +
Preference number: 4 (lower is better)
Translates to: MGLTNRLRTCTDYRTLSQCVTAP*PDTWPG
Trigger: TCCAGGCCATGTATCGGGCCACGGGGCAGTCACACA...CTGGGACAGAGTCCTGTAATCAGTGCATGTCCTTAGTCTGTTAGTTAAACCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CCA 90 bp AGTCATGATAGGATCGCCCCCTTGCCGTGGCAATTAAGAGAATCAATCCATTGGTTGGCGTTGAGTTTCTaGACTTGGGTCGGGGGCACA +
Preference number: 4 (lower is better)
Translates to: SHDRIAPLPWQLRESIHWLALSF*TWVGGT
Trigger: TGTGCCCCCGACCCAAGTCCAGAAACTCAACGCCAA...CCAATGGATTGATTCTCTTAATTGCCACGGCAAGGGGGCGATCCTATCATGACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CCA 90 bp ATCGCCCCCTTGCCGTGGCAATTAAGAGAATCAATCCATTGGTATGTAGCCATCTCCGTGGACTCGAGGTaGGCAAGGGGGAGAATCAAT +
Preference number: 4 (lower is better)
Translates to: IAPLPWQLRESIHWYVAISVDSR*ARGRIN
Trigger: ATTGATTCTCCCCCTTGCCCACCTCGAGTCCACGGA...GATGGCTACATACCAATGGATTGATTCTCTTAATTGCCACGGCAAGGGGGCGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR TCA 90 bp AATGTACTTGATGTACTTGCCCTCACATCCATTTACCACCAATGCATACATAGTGGGCACAGGCTTGTGTaGCTGCCCCGTGGCCCGATA +
Preference number: 4 (lower is better)
Translates to: NVLDVLALTSIYHQCIHSGHRLV*LPRGPI
Trigger: TATCGGGCCACGGGGCAGTCACACAAGCCTGTGCCC...ACTATGTATGCATTGGTGGTAAATGGATGTGAGGGCAAGTACATCAAGTACATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR TCA 90 bp GAAAGAAATAGCTCTGCAGCAAACCCCAGGGTTGTGCAGTTACAGATCAAAATGACACCTGGCCAGGACTaGACCAGCCCAGGCAAGAAT +
Preference number: 4 (lower is better)
Translates to: ERNSSAANPRVVQLQIKMTPGQD*TSPGKN
Trigger: ATTCTTGCCTGGGCTGGTTCAGTCCTGGCCAGGTGT...CATTTTGATCTGTAACTGCACAACCCTGGGGTTTGCTGCAGAGCTATTTCTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383710.9
ENST00000612439.4
CDS-3UTR TCA 90 bp GAAAGAAATAGCTCTGCAGCAAACCCCAGGGTTGTGCAGTTACAGATCAAAATGCCCACCTTCACTCACTaGTGCTGTGGCTTCCTCCAC +
Preference number: 4 (lower is better)
Translates to: ERNSSAANPRVVQLQIKMPTFTH*CCGFLH
Trigger: GTGGAGGAAGCCACAGCATCAGTGAGTGAAGGTGGG...CATTTTGATCTGTAACTGCACAACCCTGGGGTTTGCTGCAGAGCTATTTCTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
CDS-3UTR TCA 90 bp GAAAGAAATAGCTCTGCAGCAAACCCCAGGGTTGTGCAGTTACAGATCAAAATGCTTGACTGGTTCCCATaGCTCCCGCTCAAAGCCCCT +
Preference number: 4 (lower is better)
Translates to: ERNSSAANPRVVQLQIKMLDWFP*LPLKAP
Trigger: AGGGGCTTTGAGCGGGAGTCATGGGAACCAGTCAAG...CATTTTGATCTGTAACTGCACAACCCTGGGGTTTGCTGCAGAGCTATTTCTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000383710.9
CDS-3UTR GCA 90 bp TTCCATAACTGTAGGCTTTATATAAGGCAAAAGCAAGATGGATCCACTACTTTAAGGGAGCGAGAGCGCTaGTGCTCAGCCTCGGCCGCC +
Preference number: 4 (lower is better)
Translates to: FHNCRLYIRQKQDGSTTLRERER*CSASAA
Trigger: GGCGGCCGAGGCTGAGCAGCAGCGCTCTCGCTCCCT...TAAAGTAGTGGATCCATCTTGCTTTTGCCTTATATAAAGCCTACAGTTATGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR GCA 90 bp CAAACCCCAGGGTTGTGCAGTTACAGATCAAAATGCAATGTACATGACAGATATAGCCGAGCACCTCCTTaGCGCTCTCCTCCTCCACGA +
Preference number: 4 (lower is better)
Translates to: QTPGLCSYRSKCNVHDRYSRAPP*RSPPPR
Trigger: TCGTGGAGGAGGAGAGCGGCAAGGAGGTGCTCGGCT...ATATCTGTCATGTACATTGCATTTTGATCTGTAACTGCACAACCCTGGGGTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR GCA 90 bp GAAAGAAATAGCTCTGCAGCAAACCCCAGGGTTGTGCAGTTACAGATCAAAATGTTGCTGATCTTCTGCTaGCGGCGAGCCATGTCGGTG +
Preference number: 4 (lower is better)
Translates to: ERNSSAANPRVVQLQIKMLLIFC*RRAMSV
Trigger: CACCGACATGGCTCGCCGGCAGCAGAAGATCAGCAA...CATTTTGATCTGTAACTGCACAACCCTGGGGTTTGCTGCAGAGCTATTTCTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR GCA 90 bp ATGGGTTTAACTAACAGACTAAGGACATGCACTGATTACAGGACTCTGTCCCAGTTGCTGATCTTCTGCTaGCGGCGAGCCATGTCGGTG +
Preference number: 4 (lower is better)
Translates to: MGLTNRLRTCTDYRTLSQLLIFC*RRAMSV
Trigger: CACCGACATGGCTCGCCGGCAGCAGAAGATCAGCAA...CTGGGACAGAGTCCTGTAATCAGTGCATGTCCTTAGTCTGTTAGTTAAACCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR GCA 90 bp GTCATAAAAGTTTTTCACACACACACACACACACACACACGCACACACATGCACTTGCTGATCTTCTGCTaGCGGCGAGCCATGTCGGTG +
Preference number: 4 (lower is better)
Translates to: VIKVFHTHTHTHTRTHMHLLIFC*RRAMSV
Trigger: CACCGACATGGCTCGCCGGCAGCAGAAGATCAGCAA...GTGCATGTGTGTGCGTGTGTGTGTGTGTGTGTGTGTGTGAAAAACTTTTATGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000490353.2
CDS-3UTR GCA 90 bp AGTCATGATAGGATCGCCCCCTTGCCGTGGCAATTAAGAGAATCAATCCATTGGCGGTCCTTGACTGTCTaGAGCTGCTGTTTGCTGATC +
Preference number: 4 (lower is better)
Translates to: SHDRIAPLPWQLRESIHWRSLTV*SCCLLI
Trigger: GATCAGCAAACAGCAGCTGCAGACAGTCAAGGACCG...CCAATGGATTGATTCTCTTAATTGCCACGGCAAGGGGGCGATCCTATCATGACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR GCA 90 bp CTGTACTTGCAAATGCTTTCTAGCCAAATTCAAGGGCCATTTTCAAGAGCCATCCTCCACTCTGAACCATaGGGGCCACACGGTCGCTCT +
Preference number: 4 (lower is better)
Translates to: LYLQMLSSQIQGPFSRAILHSEP*GPHGRS
Trigger: AGAGCGACCGTGTGGCCCGCATGGTTCAGAGTGGAG...GATGGCTCTTGAAAATGGCCCTTGAATTTGGCTAGAAAGCATTTGCAAGTACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490353.2
CDS-3UTR GCA 90 bp ACGTTCCCTACACAGTACAGCACTTCTGAGACTATAGGTGTTGGCGGATACCACCAATCTCAGGCAGGCTaGGCACTCTCTTCTCAATGT +
Preference number: 4 (lower is better)
Translates to: TFPTQYSTSETIGVGGYHQSQAG*ALSSQC
Trigger: ACATTGAGAAGAGAGTGCGCAGCCTGCCTGAGATTG...GTGGTATCCGCCAACACCTATAGTCTCAGAAGTGCTGTACTGTGTAGGGAACGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490353.2
CDS-3UTR GCA 90 bp AATGTACTTGATGTACTTGCCCTCACATCCATTTACCACCAATGCATACATAGTGCTGTCATCCGGGCCTaGTGCTTCCGCGGGTCCTCT +
Preference number: 4 (lower is better)
Translates to: NVLDVLALTSIYHQCIHSAVIRA*CFRGSS
Trigger: AGAGGACCCGCGGAAGCAGCAGGCCCGGATGACAGC...ACTATGTATGCATTGGTGGTAAATGGATGTGAGGGCAAGTACATCAAGTACATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR GCA 90 bp AGTCATGATAGGATCGCCCCCTTGCCGTGGCAATTAAGAGAATCAATCCATTGGCTTCACAGCTGGCAGTaGATGGGTTGTGGAGAAGTC +
Preference number: 4 (lower is better)
Translates to: SHDRIAPLPWQLRESIHWLHSWQ*MGCGEV
Trigger: GACTTCTCCACAACCCATGCACTGCCAGCTGTGAAG...CCAATGGATTGATTCTCTTAATTGCCACGGCAAGGGGGCGATCCTATCATGACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR GCA 90 bp ATGGGTTTAACTAACAGACTAAGGACATGCACTGATTACAGGACTCTGTCCCAGACAGGCTTGTGTGACTaGCCCGTGGCCCGATACATG +
Preference number: 4 (lower is better)
Translates to: MGLTNRLRTCTDYRTLSQTGLCD*PVARYM
Trigger: CATGTATCGGGCCACGGGGCAGTCACACAAGCCTGT...CTGGGACAGAGTCCTGTAATCAGTGCATGTCCTTAGTCTGTTAGTTAAACCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR GCA 90 bp CAAACCCCAGGGTTGTGCAGTTACAGATCAAAATGCAATGTACATGACAGATATAGGGGAAGGGAGAGGTaGGTCCGTGGACTCGAGGTG +
Preference number: 4 (lower is better)
Translates to: QTPGLCSYRSKCNVHDRYRGRER*VRGLEV
Trigger: CACCTCGAGTCCACGGACGCACCTCTCCCTTCCCCT...ATATCTGTCATGTACATTGCATTTTGATCTGTAACTGCACAACCCTGGGGTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR GCA 90 bp AATGTACTTGATGTACTTGCCCTCACATCCATTTACCACCAATGCATACATAGTGAGCCCGCAGCCGGATaGCATCTGCGGCTGCTGAAG +
Preference number: 4 (lower is better)
Translates to: NVLDVLALTSIYHQCIHSEPAAG*HLRLLK
Trigger: CTTCAGCAGCCGCAGATGGCATCCGGCTGCGGGCTC...ACTATGTATGCATTGGTGGTAAATGGATGTGAGGGCAAGTACATCAAGTACATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CCA 90 bp TTCCATAACTGTAGGCTTTATATAAGGCAAAAGCAAGATGGATCCACTACTTTACCGGCGGTCGCGAGCTaGGCTCAGACCCAGAAGCGC +
Preference number: 4 (lower is better)
Translates to: FHNCRLYIRQKQDGSTTLPAVAS*AQTQKR
Trigger: GCGCTTCTGGGTCTGAGCCCAGCTCGCGACCGCCGG...TAAAGTAGTGGATCCATCTTGCTTTTGCCTTATATAAAGCCTACAGTTATGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CCA 90 bp AATGTACTTGATGTACTTGCCCTCACATCCATTTACCACCAATGCATACATAGTCAGCATAGTGGCGCCTaGGGAGCGGGGTCTCTGGAG +
Preference number: 4 (lower is better)
Translates to: NVLDVLALTSIYHQCIHSQHSGA*GAGSLE
Trigger: CTCCAGAGACCCCGCTCCCCAGGCGCCACTATGCTG...ACTATGTATGCATTGGTGGTAAATGGATGTGAGGGCAAGTACATCAAGTACATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CCA 90 bp TCTTGGTACCACATAGCTAAAATGGCAGTTGTATTGATAAACATCTCATGGGCACAGCATAGTGGCGCCTaGGGAGCGGGGTCTCTGGAG +
Preference number: 4 (lower is better)
Translates to: SWYHIAKMAVVLINISWAQHSGA*GAGSLE
Trigger: CTCCAGAGACCCCGCTCCCCAGGCGCCACTATGCTG...TGCCCATGAGATGTTTATCAATACAACTGCCATTTTAGCTATGTGGTACCAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CCA 90 bp TTCCATAACTGTAGGCTTTATATAAGGCAAAAGCAAGATGGATCCACTACTTTACGGCCGAGCCCTCGCTaGTACGGCTGGGAGACAGGC +
Preference number: 4 (lower is better)
Translates to: FHNCRLYIRQKQDGSTTLRPSPR*YGWETG
Trigger: GCCTGTCTCCCAGCCGTACCAGCGAGGGCTCGGCCG...TAAAGTAGTGGATCCATCTTGCTTTTGCCTTATATAAAGCCTACAGTTATGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CCA 90 bp CAGGGAAATACACAGACTATAGTGAAATTATTCAGTAAACAGAGATTGGGTACTCGGCCGAGCCCTCGCTaGTACGGCTGGGAGACAGGC +
Preference number: 4 (lower is better)
Translates to: QGNTQTIVKLFSKQRLGTRPSPR*YGWETG
Trigger: GCCTGTCTCCCAGCCGTACCAGCGAGGGCTCGGCCG...AGTACCCAATCTCTGTTTACTGAATAATTTCACTATAGTCTGTGTATTTCCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490353.2
CDS-3UTR CCA 90 bp CAAGAGCCATCTTCTCCAGGACCATTCTTTGGTTTTCTCAACAGAAGCAATCTGGGCTGCTTGCTCATCTaGATTGTCCAGCTGGCAGGC +
Preference number: 4 (lower is better)
Translates to: QEPSSPGPFFGFLNRSNLGCLLI*IVQLAG
Trigger: GCCTGCCAGCTGGACAATCCAGATGAGCAAGCAGCC...CAGATTGCTTCTGTTGAGAAAACCAAAGAATGGTCCTGGAGAAGATGGCTCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490353.2
CDS-3UTR CCA 90 bp GTTCACATGAATGGAGAGGCACAGAAACAGGACACCACTGGAGCCGGGTCACACGAAATTTGCGTTCCCTaGCTATTTGGTCTGCCATTT +
Preference number: 4 (lower is better)
Translates to: VHMNGEAQKQDTTGAGSHEICVP*LFGLPF
Trigger: AAATGGCAGACCAAATAGCCAGGGAACGCAAATTTC...GTGTGACCCGGCTCCAGTGGTGTCCTGTTTCTGTGCCTCTCCATTCATGTGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490353.2
CDS-3UTR CCA 90 bp AGTCATGATAGGATCGCCCCCTTGCCGTGGCAATTAAGAGAATCAATCCATTGGCTGCGTTTGAGTTTCTaGAGCTTGAACTCCCCGCCT +
Preference number: 4 (lower is better)
Translates to: SHDRIAPLPWQLRESIHWLRLSF*SLNSPP
Trigger: AGGCGGGGAGTTCAAGCTCCAGAAACTCAAACGCAG...CCAATGGATTGATTCTCTTAATTGCCACGGCAAGGGGGCGATCCTATCATGACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CCA 90 bp GATACCACTTCGTTTTGCTGGAATGCCCTTGCCACCCTTTCTGTACTTGCAAATTCTGACTTGGAGAGCTaGTTCTCACTCTCCTCGCCC +
Preference number: 4 (lower is better)
Translates to: DTTSFCWNALATLSVLANSDLES*FSLSSP
Trigger: GGGCGAGGAGAGTGAGAACCAGCTCTCCAAGTCAGA...ATTTGCAAGTACAGAAAGGGTGGCAAGGGCATTCCAGCAAAACGAAGTGGTATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490353.2
CDS-3UTR CCA 90 bp GTTCACATGAATGGAGAGGCACAGAAACAGGACACCACTGGAGCCGGGTCACACATATACGATGCGATTTaGAGCCAAAGATTTGAGGCC +
Preference number: 4 (lower is better)
Translates to: VHMNGEAQKQDTTGAGSHIYDAI*SQRFEA
Trigger: GGCCTCAAATCTTTGGCTCCAAATCGCATCGTATAT...GTGTGACCCGGCTCCAGTGGTGTCCTGTTTCTGTGCCTCTCCATTCATGTGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490353.2
CDS-3UTR CCA 90 bp ATGGGTTTAACTAACAGACTAAGGACATGCACTGATTACAGGACTCTGTCCCAGGCAGTGCATGGGTTGTaGAGAAGTCACCCTGGGTGC +
Preference number: 4 (lower is better)
Translates to: MGLTNRLRTCTDYRTLSQAVHGL*RSHPGC
Trigger: GCACCCAGGGTGACTTCTCCACAACCCATGCACTGC...CTGGGACAGAGTCCTGTAATCAGTGCATGTCCTTAGTCTGTTAGTTAAACCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CCA 90 bp AGTCATGATAGGATCGCCCCCTTGCCGTGGCAATTAAGAGAATCAATCCATTGGCTTCACCTTCACAGCTaGCAGTGCATGGGTTGTGGA +
Preference number: 4 (lower is better)
Translates to: SHDRIAPLPWQLRESIHWLHLHS*QCMGCG
Trigger: TCCACAACCCATGCACTGCCAGCTGTGAAGGTGAAG...CCAATGGATTGATTCTCTTAATTGCCACGGCAAGGGGGCGATCCTATCATGACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CCA 90 bp ATGGGTTTAACTAACAGACTAAGGACATGCACTGATTACAGGACTCTGTCCCAGGGGTGGGGTCGATCATaGCGCCATTTTCTGCCCGTT +
Preference number: 4 (lower is better)
Translates to: MGLTNRLRTCTDYRTLSQGWGRS*RHFLPV
Trigger: AACGGGCAGAAAATGGCGCCATGATCGACCCCACCC...CTGGGACAGAGTCCTGTAATCAGTGCATGTCCTTAGTCTGTTAGTTAAACCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CCA 90 bp ATCGCCCCCTTGCCGTGGCAATTAAGAGAATCAATCCATTGGTATGTAGCCATCTCAGGCCTGTTCCCATaGACATGGGATGCACAGAAG +
Preference number: 4 (lower is better)
Translates to: IAPLPWQLRESIHWYVAISGLFP*TWDAQK
Trigger: CTTCTGTGCATCCCATGTCCATGGGAACAGGCCTGA...GATGGCTACATACCAATGGATTGATTCTCTTAATTGCCACGGCAAGGGGGCGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357948.7
ENST00000383710.9
CDS-3UTR CCA 90 bp AATGTACTTGATGTACTTGCCCTCACATCCATTTACCACCAATGCATACATAGTGGAGAGGTGCGTCCGTaGACTCGAGGTGGGCAAGGG +
Preference number: 4 (lower is better)
Translates to: NVLDVLALTSIYHQCIHSGEVRP*TRGGQG
Trigger: CCCTTGCCCACCTCGAGTCCACGGACGCACCTCTCC...ACTATGTATGCATTGGTGGTAAATGGATGTGAGGGCAAGTACATCAAGTACATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
3UTR CAA 72 bp TCTGAGACTATAGGTGTTGGCGGATACCACTTCGTTTaGCTGGAATGCCCTTGCCACCCTTTCTGTACTTGC +
Preference number: 4 (lower is better)
Translates to: SETIGVGGYHFV*LECPCHPFCTC
Trigger: GCAAGTACAGAAAGGGTGGCAAGGGCATTCCAGCAAAACGAAGTGGTATCCGCCAACACCTATAGTCTCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490353.2
CDS-3UTR TCA 90 bp CTGTACTTGCAAATGCTTTCTAGCCAAATTCAAGGGCCATTTTCAAGAGCCATCGCACAGTCTCCTTGCTaGGGCCGTCAATCTCAGGCA +
Preference number: 4 (lower is better)
Translates to: LYLQMLSSQIQGPFSRAIAQSPC*GRQSQA
Trigger: TGCCTGAGATTGACGGCCTCAGCAAGGAGACTGTGC...GATGGCTCTTGAAAATGGCCCTTGAATTTGGCTAGAAAGCATTTGCAAGTACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490353.2
CDS-3UTR TCA 90 bp ATTGCTTGTAAACATATAGACATGGACATCAGGAAATCAGTGGATATGAAGGTCGGGCACAGGCTTGTGTaGCTGCCCCGTGGCCCGATA +
Preference number: 4 (lower is better)
Translates to: IACKHIDMDIRKSVDMKVGHRLV*LPRGPI
Trigger: TATCGGGCCACGGGGCAGTCACACAAGCCTGTGCCC...GACCTTCATATCCACTGATTTCCTGATGTCCATGTCTATATGTTTACAAGCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR TCA 90 bp ATGGGTTTAACTAACAGACTAAGGACATGCACTGATTACAGGACTCTGTCCCAGTTCCTCCCTTGGCGTTaGGTTTCTGGACTTGGGTCG +
Preference number: 4 (lower is better)
Translates to: MGLTNRLRTCTDYRTLSQFLPWR*VSGLGS
Trigger: CGACCCAAGTCCAGAAACTCAACGCCAAGGGAGGAA...CTGGGACAGAGTCCTGTAATCAGTGCATGTCCTTAGTCTGTTAGTTAAACCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR TCA 90 bp ATCGCCCCCTTGCCGTGGCAATTAAGAGAATCAATCCATTGGTATGTAGCCATCCGCTCAAAGCCCCTGTaGATGGATTGTGCAATTGAG +
Preference number: 4 (lower is better)
Translates to: IAPLPWQLRESIHWYVAIRSKPL*MDCAIE
Trigger: CTCAATTGCACAATCCATTCACAGGGGCTTTGAGCG...GATGGCTACATACCAATGGATTGATTCTCTTAATTGCCACGGCAAGGGGGCGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR TCA 90 bp GAAAGAAATAGCTCTGCAGCAAACCCCAGGGTTGTGCAGTTACAGATCAAAATGATTGACTGGTTCCCATaGCTCCCGCTCAAAGCCCCT +
Preference number: 4 (lower is better)
Translates to: ERNSSAANPRVVQLQIKMIDWFP*LPLKAP
Trigger: AGGGGCTTTGAGCGGGAGTCATGGGAACCAGTCAAT...CATTTTGATCTGTAACTGCACAACCCTGGGGTTTGCTGCAGAGCTATTTCTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357948.7
ENST00000612439.4
CDS-3UTR TCA 90 bp ATCGCCCCCTTGCCGTGGCAATTAAGAGAATCAATCCATTGGTATGTAGCCATCTCCCGAATGAAGGTCTaGAGGGCGTCAAGTTTCCAA +
Preference number: 4 (lower is better)
Translates to: IAPLPWQLRESIHWYVAISRMKV*RASSFQ
Trigger: TTGGAAACTTGACGCCCTTCAGACCTTCATTCGGGA...GATGGCTACATACCAATGGATTGATTCTCTTAATTGCCACGGCAAGGGGGCGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
CDS-3UTR TCA 90 bp ATGGGTTTAACTAACAGACTAAGGACATGCACTGATTACAGGACTCTGTCCCAGAGTGCAGGTCCCGAATaGAGGTCTGAAGGGCGTCAA +
Preference number: 4 (lower is better)
Translates to: MGLTNRLRTCTDYRTLSQSAGPE*RSEGRQ
Trigger: TTGACGCCCTTCAGACCTTCATTCGGGACCTGCACT...CTGGGACAGAGTCCTGTAATCAGTGCATGTCCTTAGTCTGTTAGTTAAACCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
CDS-3UTR TCA 90 bp GAAAGAAATAGCTCTGCAGCAAACCCCAGGGTTGTGCAGTTACAGATCAAAATGTGGCTTCCTCCACAGTaGGACGGTTCCGGATCGTTT +
Preference number: 4 (lower is better)
Translates to: ERNSSAANPRVVQLQIKMWLPPQ*DGSGSF
Trigger: AAACGATCCGGAACCGTCTCACTGTGGAGGAAGCCA...CATTTTGATCTGTAACTGCACAACCCTGGGGTTTGCTGCAGAGCTATTTCTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
CDS-3UTR GCA 90 bp AATGTACTTGATGTACTTGCCCTCACATCCATTTACCACCAATGCATACATAGTAGCCGAGCACCTCCTTaGCGCTCTCCTCCTCCACGA +
Preference number: 4 (lower is better)
Translates to: NVLDVLALTSIYHQCIHSSRAPP*RSPPPR
Trigger: TCGTGGAGGAGGAGAGCGGCAAGGAGGTGCTCGGCT...ACTATGTATGCATTGGTGGTAAATGGATGTGAGGGCAAGTACATCAAGTACATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR GCA 90 bp ATGGGTTTAACTAACAGACTAAGGACATGCACTGATTACAGGACTCTGTCCCAGTCCTCCTCCTCTTTCTaGAGCCGCTCCAACTCTTCC +
Preference number: 4 (lower is better)
Translates to: MGLTNRLRTCTDYRTLSQSSSSF*SRSNSS
Trigger: GGAAGAGTTGGAGCGGCTGCAGAAAGAGGAGGAGGA...CTGGGACAGAGTCCTGTAATCAGTGCATGTCCTTAGTCTGTTAGTTAAACCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR GCA 90 bp AGTCATGATAGGATCGCCCCCTTGCCGTGGCAATTAAGAGAATCAATCCATTGGACGAACACATACAGCTaGAGCCTCTTCTTCCTCTCC +
Preference number: 4 (lower is better)
Translates to: SHDRIAPLPWQLRESIHWTNTYS*SLFFLS
Trigger: GGAGAGGAAGAAGAGGCTGCAGCTGTATGTGTTCGT...CCAATGGATTGATTCTCTTAATTGCCACGGCAAGGGGGCGATCCTATCATGACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR GCA 90 bp GAAAGAAATAGCTCTGCAGCAAACCCCAGGGTTGTGCAGTTACAGATCAAAATGTGTTTGCTGATCTTCTaGTGCCGGCGAGCCATGTCG +
Preference number: 4 (lower is better)
Translates to: ERNSSAANPRVVQLQIKMCLLIF*CRRAMS
Trigger: CGACATGGCTCGCCGGCAGCAGAAGATCAGCAAACA...CATTTTGATCTGTAACTGCACAACCCTGGGGTTTGCTGCAGAGCTATTTCTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR GCA 90 bp GATACCACTTCGTTTTGCTGGAATGCCCTTGCCACCCTTTCTGTACTTGCAAATCGGTCCTTGACTGTCTaGAGCTGCTGTTTGCTGATC +
Preference number: 4 (lower is better)
Translates to: DTTSFCWNALATLSVLANRSLTV*SCCLLI
Trigger: GATCAGCAAACAGCAGCTGCAGACAGTCAAGGACCG...ATTTGCAAGTACAGAAAGGGTGGCAAGGGCATTCCAGCAAAACGAAGTGGTATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490353.2
CDS-3UTR GCA 90 bp CAAACCCCAGGGTTGTGCAGTTACAGATCAAAATGCAATGTACATGACAGATATCTCCACTCTGAACCATaGGGGCCACACGGTCGCTCT +
Preference number: 4 (lower is better)
Translates to: QTPGLCSYRSKCNVHDRYLHSEP*GPHGRS
Trigger: AGAGCGACCGTGTGGCCCGCATGGTTCAGAGTGGAG...ATATCTGTCATGTACATTGCATTTTGATCTGTAACTGCACAACCCTGGGGTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR GCA 90 bp ATCGCCCCCTTGCCGTGGCAATTAAGAGAATCAATCCATTGGTATGTAGCCATCCAATCTCAGGCAGGCTaGGCACTCTCTTCTCAATGT +
Preference number: 4 (lower is better)
Translates to: IAPLPWQLRESIHWYVAIQSQAG*ALSSQC
Trigger: ACATTGAGAAGAGAGTGCGCAGCCTGCCTGAGATTG...GATGGCTACATACCAATGGATTGATTCTCTTAATTGCCACGGCAAGGGGGCGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR GCA 90 bp AATGTACTTGATGTACTTGCCCTCACATCCATTTACCACCAATGCATACATAGTGTCATCCGGGCCTGCTaGTTCCGCGGGTCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: NVLDVLALTSIYHQCIHSVIRAC*FRGSSS
Trigger: AGAAGAGGACCCGCGGAAGCAGCAGGCCCGGATGAC...ACTATGTATGCATTGGTGGTAAATGGATGTGAGGGCAAGTACATCAAGTACATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR GCA 90 bp TCTTGGTACCACATAGCTAAAATGGCAGTTGTATTGATAAACATCTCATGGGCAGTCATCCGGGCCTGCTaGTTCCGCGGGTCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: SWYHIAKMAVVLINISWAVIRAC*FRGSSS
Trigger: AGAAGAGGACCCGCGGAAGCAGCAGGCCCGGATGAC...TGCCCATGAGATGTTTATCAATACAACTGCCATTTTAGCTATGTGGTACCAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR GCA 90 bp TTGATGTACTTGCCCTCACATCCATTTACCACCAATGCATACATAGTACATGAAAATCAGCTCGGAGGCTaGGCTGGCTGTCATCCGGGC +
Preference number: 4 (lower is better)
Translates to: LMYLPSHPFTTNAYIVHENQLGG*AGCHPG
Trigger: GCCCGGATGACAGCCAGCGCAGCCTCCGAGCTGATT...TTCATGTACTATGTATGCATTGGTGGTAAATGGATGTGAGGGCAAGTACATCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR GCA 90 bp TCTTGGTACCACATAGCTAAAATGGCAGTTGTATTGATAAACATCTCATGGGCAAATCAGCTCGGAGGCTaGGCTGGCTGTCATCCGGGC +
Preference number: 4 (lower is better)
Translates to: SWYHIAKMAVVLINISWANQLGG*AGCHPG
Trigger: GCCCGGATGACAGCCAGCGCAGCCTCCGAGCTGATT...TGCCCATGAGATGTTTATCAATACAACTGCCATTTTAGCTATGTGGTACCAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR GCA 90 bp AATGTACTTGATGTACTTGCCCTCACATCCATTTACCACCAATGCATACATAGTAATCAGCTCGGAGGCTaGGCTGGCTGTCATCCGGGC +
Preference number: 4 (lower is better)
Translates to: NVLDVLALTSIYHQCIHSNQLGG*AGCHPG
Trigger: GCCCGGATGACAGCCAGCGCAGCCTCCGAGCTGATT...ACTATGTATGCATTGGTGGTAAATGGATGTGAGGGCAAGTACATCAAGTACATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR GCA 90 bp AGTCATGATAGGATCGCCCCCTTGCCGTGGCAATTAAGAGAATCAATCCATTGGCATAGAGTTGCTCCTTaGTCAGAATCAGCTCGGAGG +
Preference number: 4 (lower is better)
Translates to: SHDRIAPLPWQLRESIHWHRVAP*SESARR
Trigger: CCTCCGAGCTGATTCTGAGCAAGGAGCAACTCTATG...CCAATGGATTGATTCTCTTAATTGCCACGGCAAGGGGGCGATCCTATCATGACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR GCA 90 bp ATCGCCCCCTTGCCGTGGCAATTAAGAGAATCAATCCATTGGTATGTAGCCATCCATAGAGTTGCTCCTTaGTCAGAATCAGCTCGGAGG +
Preference number: 4 (lower is better)
Translates to: IAPLPWQLRESIHWYVAIHRVAP*SESARR
Trigger: CCTCCGAGCTGATTCTGAGCAAGGAGCAACTCTATG...GATGGCTACATACCAATGGATTGATTCTCTTAATTGCCACGGCAAGGGGGCGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR GCA 90 bp GAAAGAAATAGCTCTGCAGCAAACCCCAGGGTTGTGCAGTTACAGATCAAAATGCCTGGACCCACAGGATaGGGTCTTGTTCATCGTCAC +
Preference number: 4 (lower is better)
Translates to: ERNSSAANPRVVQLQIKMPGPTG*GLVHRH
Trigger: GTGACGATGAACAAGACCGCATCCTGTGGGTCCAGG...CATTTTGATCTGTAACTGCACAACCCTGGGGTTTGCTGCAGAGCTATTTCTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR GCA 90 bp ATCGCCCCCTTGCCGTGGCAATTAAGAGAATCAATCCATTGGTATGTAGCCATCCATGGCGCCATTTTCTaGCCGTTCAAGCAAGTCTCT +
Preference number: 4 (lower is better)
Translates to: IAPLPWQLRESIHWYVAIHGAIF*PFKQVS
Trigger: AGAGACTTGCTTGAACGGGCAGAAAATGGCGCCATG...GATGGCTACATACCAATGGATTGATTCTCTTAATTGCCACGGCAAGGGGGCGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR GCA 90 bp ATGGGTTTAACTAACAGACTAAGGACATGCACTGATTACAGGACTCTGTCCCAGGGTCCGTCAACCAGGTaGAGATCACGTTCATGGAGC +
Preference number: 4 (lower is better)
Translates to: MGLTNRLRTCTDYRTLSQGPSTR*RSRSWS
Trigger: GCTCCATGAACGTGATCTGCACCTGGTTGACGGACC...CTGGGACAGAGTCCTGTAATCAGTGCATGTCCTTAGTCTGTTAGTTAAACCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
CDS-3UTR GCA 90 bp ATGGGTTTAACTAACAGACTAAGGACATGCACTGATTACAGGACTCTGTCCCAGTTCATGCTGATGCCCTaGAGTCCCCCACCTTCACTC +
Preference number: 4 (lower is better)
Translates to: MGLTNRLRTCTDYRTLSQFMLMP*SPPPSL
Trigger: GAGTGAAGGTGGGGGACTGCAGGGCATCAGCATGAA...CTGGGACAGAGTCCTGTAATCAGTGCATGTCCTTAGTCTGTTAGTTAAACCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
CDS-3UTR GCA 90 bp AATGTACTTGATGTACTTGCCCTCACATCCATTTACCACCAATGCATACATAGTAGGGGGAGAATCAATTaGGAGCCCCGAGCCCGCAGC +
Preference number: 4 (lower is better)
Translates to: NVLDVLALTSIYHQCIHSRGRIN*EPRARS
Trigger: GCTGCGGGCTCGGGGCTCGCAATTGATTCTCCCCCT...ACTATGTATGCATTGGTGGTAAATGGATGTGAGGGCAAGTACATCAAGTACATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR GCA 90 bp AGTCATGATAGGATCGCCCCCTTGCCGTGGCAATTAAGAGAATCAATCCATTGGAAAGATGCCGAGTGTTaGAAGCTGTCGATGCAGCCA +
Preference number: 4 (lower is better)
Translates to: SHDRIAPLPWQLRESIHWKDAEC*KLSMQP
Trigger: TGGCTGCATCGACAGCTTGCAACACTCGGCATCTTT...CCAATGGATTGATTCTCTTAATTGCCACGGCAAGGGGGCGATCCTATCATGACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000383710.9
CDS-3UTR CCA 90 bp AATGTACTTGATGTACTTGCCCTCACATCCATTTACCACCAATGCATACATAGTCCTCCCGGGAGTCGTTaGCGGAACAGCCTCCACTCT +
Preference number: 4 (lower is better)
Translates to: NVLDVLALTSIYHQCIHSPPGSR*RNSLHS
Trigger: AGAGTGGAGGCTGTTCCGCCAACGACTCCCGGGAGG...ACTATGTATGCATTGGTGGTAAATGGATGTGAGGGCAAGTACATCAAGTACATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CCA 90 bp TCTTGGTACCACATAGCTAAAATGGCAGTTGTATTGATAAACATCTCATGGGCACCTCCCGGGAGTCGTTaGCGGAACAGCCTCCACTCT +
Preference number: 4 (lower is better)
Translates to: SWYHIAKMAVVLINISWAPPGSR*RNSLHS
Trigger: AGAGTGGAGGCTGTTCCGCCAACGACTCCCGGGAGG...TGCCCATGAGATGTTTATCAATACAACTGCCATTTTAGCTATGTGGTACCAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CCA 90 bp ATGCCCTTGCCACCCTTTCTGTACTTGCAAATGCTTTCTAGCCAAATTCAAGGGCTGCGTTTGAGTTTCTaGAGCTTGAACTCCCCGCCT +
Preference number: 4 (lower is better)
Translates to: MPLPPFLYLQMLSSQIQGLRLSF*SLNSPP
Trigger: AGGCGGGGAGTTCAAGCTCCAGAAACTCAAACGCAG...CCCTTGAATTTGGCTAGAAAGCATTTGCAAGTACAGAAAGGGTGGCAAGGGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490353.2
CDS-3UTR CCA 90 bp ATGGGTTTAACTAACAGACTAAGGACATGCACTGATTACAGGACTCTGTCCCAGTCTGACTTGGAGAGCTaGTTCTCACTCTCCTCGCCC +
Preference number: 4 (lower is better)
Translates to: MGLTNRLRTCTDYRTLSQSDLES*FSLSSP
Trigger: GGGCGAGGAGAGTGAGAACCAGCTCTCCAAGTCAGA...CTGGGACAGAGTCCTGTAATCAGTGCATGTCCTTAGTCTGTTAGTTAAACCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CCA 90 bp AGTCATGATAGGATCGCCCCCTTGCCGTGGCAATTAAGAGAATCAATCCATTGGGCACGACATCTGACTTaGAGAGCTGGTTCTCACTCT +
Preference number: 4 (lower is better)
Translates to: SHDRIAPLPWQLRESIHWARHLT*RAGSHS
Trigger: AGAGTGAGAACCAGCTCTCCAAGTCAGATGTCGTGC...CCAATGGATTGATTCTCTTAATTGCCACGGCAAGGGGGCGATCCTATCATGACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CCA 90 bp GAAAGAAATAGCTCTGCAGCAAACCCCAGGGTTGTGCAGTTACAGATCAAAATGGTGGAGAAGTCACCCTaGGTGCCCCAGGTTGGTTTA +
Preference number: 4 (lower is better)
Translates to: ERNSSAANPRVVQLQIKMVEKSP*VPQVGL
Trigger: TAAACCAACCTGGGGCACCCAGGGTGACTTCTCCAC...CATTTTGATCTGTAACTGCACAACCCTGGGGTTTGCTGCAGAGCTATTTCTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CCA 90 bp ATGGGTTTAACTAACAGACTAAGGACATGCACTGATTACAGGACTCTGTCCCAGGTGGAGAAGTCACCCTaGGTGCCCCAGGTTGGTTTA +
Preference number: 4 (lower is better)
Translates to: MGLTNRLRTCTDYRTLSQVEKSP*VPQVGL
Trigger: TAAACCAACCTGGGGCACCCAGGGTGACTTCTCCAC...CTGGGACAGAGTCCTGTAATCAGTGCATGTCCTTAGTCTGTTAGTTAAACCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CCA 90 bp GAAAGAAATAGCTCTGCAGCAAACCCCAGGGTTGTGCAGTTACAGATCAAAATGACAGCTGGCAGTGCATaGGTTGTGGAGAAGTCACCC +
Preference number: 4 (lower is better)
Translates to: ERNSSAANPRVVQLQIKMTAGSA*VVEKSP
Trigger: GGGTGACTTCTCCACAACCCATGCACTGCCAGCTGT...CATTTTGATCTGTAACTGCACAACCCTGGGGTTTGCTGCAGAGCTATTTCTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CCA 90 bp ATGGGTTTAACTAACAGACTAAGGACATGCACTGATTACAGGACTCTGTCCCAGACAGCTGGCAGTGCATaGGTTGTGGAGAAGTCACCC +
Preference number: 4 (lower is better)
Translates to: MGLTNRLRTCTDYRTLSQTAGSA*VVEKSP
Trigger: GGGTGACTTCTCCACAACCCATGCACTGCCAGCTGT...CTGGGACAGAGTCCTGTAATCAGTGCATGTCCTTAGTCTGTTAGTTAAACCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CCA 90 bp CAAACCCCAGGGTTGTGCAGTTACAGATCAAAATGCAATGTACATGACAGATATGCCACCCTCCAAACCTaGCTGGGGGTCGGTGTAATC +
Preference number: 4 (lower is better)
Translates to: QTPGLCSYRSKCNVHDRYATLQT*LGVGVI
Trigger: GATTACACCGACCCCCAGCCAGGTTTGGAGGGTGGC...ATATCTGTCATGTACATTGCATTTTGATCTGTAACTGCACAACCCTGGGGTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CCA 90 bp TCTTGGTACCACATAGCTAAAATGGCAGTTGTATTGATAAACATCTCATGGGCACCGTGGCCCGATACATaGCCTGGACCCACAGGATGC +
Preference number: 4 (lower is better)
Translates to: SWYHIAKMAVVLINISWAPWPDT*PGPTGC
Trigger: GCATCCTGTGGGTCCAGGCCATGTATCGGGCCACGG...TGCCCATGAGATGTTTATCAATACAACTGCCATTTTAGCTATGTGGTACCAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CCA 90 bp ATCGCCCCCTTGCCGTGGCAATTAAGAGAATCAATCCATTGGTATGTAGCCATCCTGTTCCCATGGACATaGGATGCACAGAAGGCAAAG +
Preference number: 4 (lower is better)
Translates to: IAPLPWQLRESIHWYVAILFPWT*DAQKAK
Trigger: CTTTGCCTTCTGTGCATCCCATGTCCATGGGAACAG...GATGGCTACATACCAATGGATTGATTCTCTTAATTGCCACGGCAAGGGGGCGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CCA 90 bp ATCGCCCCCTTGCCGTGGCAATTAAGAGAATCAATCCATTGGTATGTAGCCATCTCTTGCTGTTTAAGGTaGAGTCCAGGACCCCTTGCA +
Preference number: 4 (lower is better)
Translates to: IAPLPWQLRESIHWYVAISCCLR*SPGPLA
Trigger: TGCAAGGGGTCCTGGACTCCACCTTAAACAGCAAGA...GATGGCTACATACCAATGGATTGATTCTCTTAATTGCCACGGCAAGGGGGCGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
CDS-3UTR CCA 90 bp ATGGGTTTAACTAACAGACTAAGGACATGCACTGATTACAGGACTCTGTCCCAGTCCGTGGACTCGAGGTaGGCAAGGGGGAGAATCAAT +
Preference number: 4 (lower is better)
Translates to: MGLTNRLRTCTDYRTLSQSVDSR*ARGRIN
Trigger: ATTGATTCTCCCCCTTGCCCACCTCGAGTCCACGGA...CTGGGACAGAGTCCTGTAATCAGTGCATGTCCTTAGTCTGTTAGTTAAACCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
3UTR CAA 72 bp TGTTGGCGGATACCACTTCGTTTTGCTGGAATGCCCTaGCCACCCTTTCTGTACTTGCAAATGCTTTCTAGC +
Preference number: 4 (lower is better)
Translates to: CWRIPLRFAGMP*PPFLYLQMLSS
Trigger: GCTAGAAAGCATTTGCAAGTACAGAAAGGGTGGCAAGGGCATTCCAGCAAAACGAAGTGGTATCCGCCAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490353.2
CDS-3UTR TCA 90 bp CAAACCCCAGGGTTGTGCAGTTACAGATCAAAATGCAATGTACATGACAGATATGCACAGTCTCCTTGCTaGGGCCGTCAATCTCAGGCA +
Preference number: 4 (lower is better)
Translates to: QTPGLCSYRSKCNVHDRYAQSPC*GRQSQA
Trigger: TGCCTGAGATTGACGGCCTCAGCAAGGAGACTGTGC...ATATCTGTCATGTACATTGCATTTTGATCTGTAACTGCACAACCCTGGGGTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR TCA 90 bp GAAAGAAATAGCTCTGCAGCAAACCCCAGGGTTGTGCAGTTACAGATCAAAATGAGACAGCACGACATCTaGCTTGGAGAGCTGGTTCTC +
Preference number: 4 (lower is better)
Translates to: ERNSSAANPRVVQLQIKMRQHDI*LGELVL
Trigger: GAGAACCAGCTCTCCAAGTCAGATGTCGTGCTGTCT...CATTTTGATCTGTAACTGCACAACCCTGGGGTTTGCTGCAGAGCTATTTCTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR TCA 90 bp ATCGCCCCCTTGCCGTGGCAATTAAGAGAATCAATCCATTGGTATGTAGCCATCTTAGAAGCCTCGGCCTaGTCAGTCTGTAGTTTCTCT +
Preference number: 4 (lower is better)
Translates to: IAPLPWQLRESIHWYVAILEASA*SVCSFS
Trigger: AGAGAAACTACAGACTGATCAGGCCGAGGCTTCTAA...GATGGCTACATACCAATGGATTGATTCTCTTAATTGCCACGGCAAGGGGGCGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR TCA 90 bp AGTCATGATAGGATCGCCCCCTTGCCGTGGCAATTAAGAGAATCAATCCATTGGATGGCAAACGTGTACTaGCTGACCTGCACCAATACA +
Preference number: 4 (lower is better)
Translates to: SHDRIAPLPWQLRESIHWMANVY*LTCTNT
Trigger: TGTATTGGTGCAGGTCAGTCAGTACACGTTTGCCAT...CCAATGGATTGATTCTCTTAATTGCCACGGCAAGGGGGCGATCCTATCATGACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR TCA 90 bp GAAAGAAATAGCTCTGCAGCAAACCCCAGGGTTGTGCAGTTACAGATCAAAATGGTCTACTGCAAAGAGTaGCAGGAACGTCTCCGCATG +
Preference number: 4 (lower is better)
Translates to: ERNSSAANPRVVQLQIKMVYCKE*QERLRM
Trigger: CATGCGGAGACGTTCCTGTCACTCTTTGCAGTAGAC...CATTTTGATCTGTAACTGCACAACCCTGGGGTTTGCTGCAGAGCTATTTCTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR TCA 90 bp ATGGGTTTAACTAACAGACTAAGGACATGCACTGATTACAGGACTCTGTCCCAGTGCCTGACCCATTATTaGCTGGTTCCCATGACTCCC +
Preference number: 4 (lower is better)
Translates to: MGLTNRLRTCTDYRTLSQCLTHY*LVPMTP
Trigger: GGGAGTCATGGGAACCAGTCAATAATGGGTCAGGCA...CTGGGACAGAGTCCTGTAATCAGTGCATGTCCTTAGTCTGTTAGTTAAACCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000612439.4
CDS-3UTR TCA 90 bp ATCGCCCCCTTGCCGTGGCAATTAAGAGAATCAATCCATTGGTATGTAGCCATCGGCCTTTTCAGCTCTTaGTTTGCCTGGGTTTTGGAA +
Preference number: 4 (lower is better)
Translates to: IAPLPWQLRESIHWYVAIGLFSS*FAWVLE
Trigger: TTCCAAAACCCAGGCAAATCAAGAGCTGAAAAGGCC...GATGGCTACATACCAATGGATTGATTCTCTTAATTGCCACGGCAAGGGGGCGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000612439.4
CDS-3UTR GCA 90 bp ATTGCTTGTAAACATATAGACATGGACATCAGGAAATCAGTGGATATGAAGGTCAGCCGAGCACCTCCTTaGCGCTCTCCTCCTCCACGA +
Preference number: 4 (lower is better)
Translates to: IACKHIDMDIRKSVDMKVSRAPP*RSPPPR
Trigger: TCGTGGAGGAGGAGAGCGGCAAGGAGGTGCTCGGCT...GACCTTCATATCCACTGATTTCCTGATGTCCATGTCTATATGTTTACAAGCAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR GCA 90 bp ATGGGTTTAACTAACAGACTAAGGACATGCACTGATTACAGGACTCTGTCCCAGCGGTCCTTGACTGTCTaGAGCTGCTGTTTGCTGATC +
Preference number: 4 (lower is better)
Translates to: MGLTNRLRTCTDYRTLSQRSLTV*SCCLLI
Trigger: GATCAGCAAACAGCAGCTGCAGACAGTCAAGGACCG...CTGGGACAGAGTCCTGTAATCAGTGCATGTCCTTAGTCTGTTAGTTAAACCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR GCA 90 bp GAAAGAAATAGCTCTGCAGCAAACCCCAGGGTTGTGCAGTTACAGATCAAAATGCGGTCCTTGACTGTCTaGAGCTGCTGTTTGCTGATC +
Preference number: 4 (lower is better)
Translates to: ERNSSAANPRVVQLQIKMRSLTV*SCCLLI
Trigger: GATCAGCAAACAGCAGCTGCAGACAGTCAAGGACCG...CATTTTGATCTGTAACTGCACAACCCTGGGGTTTGCTGCAGAGCTATTTCTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR GCA 90 bp TTGATGTACTTGCCCTCACATCCATTTACCACCAATGCATACATAGTACATGAACTCCACTCTGAACCATaGGGGCCACACGGTCGCTCT +
Preference number: 4 (lower is better)
Translates to: LMYLPSHPFTTNAYIVHELHSEP*GPHGRS
Trigger: AGAGCGACCGTGTGGCCCGCATGGTTCAGAGTGGAG...TTCATGTACTATGTATGCATTGGTGGTAAATGGATGTGAGGGCAAGTACATCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR GCA 90 bp TCTTGGTACCACATAGCTAAAATGGCAGTTGTATTGATAAACATCTCATGGGCACTCCACTCTGAACCATaGGGGCCACACGGTCGCTCT +
Preference number: 4 (lower is better)
Translates to: SWYHIAKMAVVLINISWALHSEP*GPHGRS
Trigger: AGAGCGACCGTGTGGCCCGCATGGTTCAGAGTGGAG...TGCCCATGAGATGTTTATCAATACAACTGCCATTTTAGCTATGTGGTACCAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR GCA 90 bp ATGGGTTTAACTAACAGACTAAGGACATGCACTGATTACAGGACTCTGTCCCAGCTTCACAGCTGGCAGTaGATGGGTTGTGGAGAAGTC +
Preference number: 4 (lower is better)
Translates to: MGLTNRLRTCTDYRTLSQLHSWQ*MGCGEV
Trigger: GACTTCTCCACAACCCATGCACTGCCAGCTGTGAAG...CTGGGACAGAGTCCTGTAATCAGTGCATGTCCTTAGTCTGTTAGTTAAACCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR GCA 90 bp ATCGCCCCCTTGCCGTGGCAATTAAGAGAATCAATCCATTGGTATGTAGCCATCGAGACTGTCATTTTGTaGCACTCTGACTGTTTGGGG +
Preference number: 4 (lower is better)
Translates to: IAPLPWQLRESIHWYVAIETVIL*HSDCLG
Trigger: CCCCAAACAGTCAGAGTGGCACAAAATGACAGTCTC...GATGGCTACATACCAATGGATTGATTCTCTTAATTGCCACGGCAAGGGGGCGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR GCA 90 bp ATCGCCCCCTTGCCGTGGCAATTAAGAGAATCAATCCATTGGTATGTAGCCATCAGGAACGTCTCCGCATaGTCCACCATTAAATCTGAC +
Preference number: 4 (lower is better)
Translates to: IAPLPWQLRESIHWYVAIRNVSA*STIKSD
Trigger: GTCAGATTTAATGGTGGAGCATGCGGAGACGTTCCT...GATGGCTACATACCAATGGATTGATTCTCTTAATTGCCACGGCAAGGGGGCGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR GCA 90 bp GAAAGAAATAGCTCTGCAGCAAACCCCAGGGTTGTGCAGTTACAGATCAAAATGCATGTGTCTGGAGGTTaGACCTCTAAGGCTGCATCC +
Preference number: 4 (lower is better)
Translates to: ERNSSAANPRVVQLQIKMHVSGG*TSKAAS
Trigger: GGATGCAGCCTTAGAGGTGCAACCTCCAGACACATG...CATTTTGATCTGTAACTGCACAACCCTGGGGTTTGCTGCAGAGCTATTTCTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR GCA 90 bp GAAAGAAATAGCTCTGCAGCAAACCCCAGGGTTGTGCAGTTACAGATCAAAATGTCTTCTTCAGGCCAGTaGAGGTCCCGAATGAAGGTC +
Preference number: 4 (lower is better)
Translates to: ERNSSAANPRVVQLQIKMSSSGQ*RSRMKV
Trigger: GACCTTCATTCGGGACCTGCACTGGCCTGAAGAAGA...CATTTTGATCTGTAACTGCACAACCCTGGGGTTTGCTGCAGAGCTATTTCTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
CDS-3UTR GCA 90 bp ATTGCTTGTAAACATATAGACATGGACATCAGGAAATCAGTGGATATGAAGGTCAGGGGAAGGGAGAGGTaGGTCCGTGGACTCGAGGTG +
Preference number: 4 (lower is better)
Translates to: IACKHIDMDIRKSVDMKVRGRER*VRGLEV
Trigger: CACCTCGAGTCCACGGACGCACCTCTCCCTTCCCCT...GACCTTCATATCCACTGATTTCCTGATGTCCATGTCTATATGTTTACAAGCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR GCA 90 bp ATGGGTTTAACTAACAGACTAAGGACATGCACTGATTACAGGACTCTGTCCCAGCGCCTCCAGAAAAGATaGCGAGTGTTGCAAGCTGTC +
Preference number: 4 (lower is better)
Translates to: MGLTNRLRTCTDYRTLSQRLQKR*RVLQAV
Trigger: GACAGCTTGCAACACTCGGCATCTTTTCTGGAGGCG...CTGGGACAGAGTCCTGTAATCAGTGCATGTCCTTAGTCTGTTAGTTAAACCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CCA 90 bp ATTGCTTGTAAACATATAGACATGGACATCAGGAAATCAGTGGATATGAAGGTCTTGGAGTGCAAAAGGTaGGGGGCGCTGGAGGCAGCC +
Preference number: 4 (lower is better)
Translates to: IACKHIDMDIRKSVDMKVLECKR*GALEAA
Trigger: GGCTGCCTCCAGCGCCCCCCACCTTTTGCACTCCAA...GACCTTCATATCCACTGATTTCCTGATGTCCATGTCTATATGTTTACAAGCAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CCA 90 bp ATTGCTTGTAAACATATAGACATGGACATCAGGAAATCAGTGGATATGAAGGTCCCTCCCGGGAGTCGTTaGCGGAACAGCCTCCACTCT +
Preference number: 4 (lower is better)
Translates to: IACKHIDMDIRKSVDMKVPPGSR*RNSLHS
Trigger: AGAGTGGAGGCTGTTCCGCCAACGACTCCCGGGAGG...GACCTTCATATCCACTGATTTCCTGATGTCCATGTCTATATGTTTACAAGCAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CCA 90 bp ATCGCCCCCTTGCCGTGGCAATTAAGAGAATCAATCCATTGGTATGTAGCCATCAGATGGCATCAAATTTaGCCATCCAGGAGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: IAPLPWQLRESIHWYVAIRWHQI*PSRSSA
Trigger: TGCTGAGCTCCTGGATGGCCAAATTTGATGCCATCT...GATGGCTACATACCAATGGATTGATTCTCTTAATTGCCACGGCAAGGGGGCGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CCA 90 bp AGTCATGATAGGATCGCCCCCTTGCCGTGGCAATTAAGAGAATCAATCCATTGGCTTCTCCACGGTAGATaGCATCAAATTTGGCCATCC +
Preference number: 4 (lower is better)
Translates to: SHDRIAPLPWQLRESIHWLLHGR*HQIWPS
Trigger: GGATGGCCAAATTTGATGCCATCTACCGTGGAGAAG...CCAATGGATTGATTCTCTTAATTGCCACGGCAAGGGGGCGATCCTATCATGACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CCA 90 bp ATGGGTTTAACTAACAGACTAAGGACATGCACTGATTACAGGACTCTGTCCCAGAGCTCTCGTCTGATCTaGGCTGCTTGCTCATCTGGA +
Preference number: 4 (lower is better)
Translates to: MGLTNRLRTCTDYRTLSQSSRLI*AACSSG
Trigger: TCCAGATGAGCAAGCAGCCCAGATCAGACGAGAGCT...CTGGGACAGAGTCCTGTAATCAGTGCATGTCCTTAGTCTGTTAGTTAAACCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CCA 90 bp ATGGGTTTAACTAACAGACTAAGGACATGCACTGATTACAGGACTCTGTCCCAGCTGCGTTTGAGTTTCTaGAGCTTGAACTCCCCGCCT +
Preference number: 4 (lower is better)
Translates to: MGLTNRLRTCTDYRTLSQLRLSF*SLNSPP
Trigger: AGGCGGGGAGTTCAAGCTCCAGAAACTCAAACGCAG...CTGGGACAGAGTCCTGTAATCAGTGCATGTCCTTAGTCTGTTAGTTAAACCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CCA 90 bp TTGATGTACTTGCCCTCACATCCATTTACCACCAATGCATACATAGTACATGAACTGGGTGCCCCAGGTTaGTTTAGAAGCCTCGGCCTG +
Preference number: 4 (lower is better)
Translates to: LMYLPSHPFTTNAYIVHELGAPG*FRSLGL
Trigger: CAGGCCGAGGCTTCTAAACCAACCTGGGGCACCCAG...TTCATGTACTATGTATGCATTGGTGGTAAATGGATGTGAGGGCAAGTACATCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CCA 90 bp ATGGGTTTAACTAACAGACTAAGGACATGCACTGATTACAGGACTCTGTCCCAGCTTCACCTTCACAGCTaGCAGTGCATGGGTTGTGGA +
Preference number: 4 (lower is better)
Translates to: MGLTNRLRTCTDYRTLSQLHLHS*QCMGCG
Trigger: TCCACAACCCATGCACTGCCAGCTGTGAAGGTGAAG...CTGGGACAGAGTCCTGTAATCAGTGCATGTCCTTAGTCTGTTAGTTAAACCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CCA 90 bp CAAACCCCAGGGTTGTGCAGTTACAGATCAAAATGCAATGTACATGACAGATATCTGTTCGGGGTGGGATaGAGAATAACCCGCCCAAGC +
Preference number: 4 (lower is better)
Translates to: QTPGLCSYRSKCNVHDRYLFGVG*RITRPS
Trigger: GCTTGGGCGGGTTATTCTCCATCCCACCCCGAACAG...ATATCTGTCATGTACATTGCATTTTGATCTGTAACTGCACAACCCTGGGGTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CCA 90 bp CAAACCCCAGGGTTGTGCAGTTACAGATCAAAATGCAATGTACATGACAGATATGCCACTCTGACTGTTTaGGGCTGTTCGGGGTGGGAT +
Preference number: 4 (lower is better)
Translates to: QTPGLCSYRSKCNVHDRYATLTV*GCSGWD
Trigger: ATCCCACCCCGAACAGCCCCAAACAGTCAGAGTGGC...ATATCTGTCATGTACATTGCATTTTGATCTGTAACTGCACAACCCTGGGGTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CCA 90 bp TTGATGTACTTGCCCTCACATCCATTTACCACCAATGCATACATAGTACATGAAGCCACCCTCCAAACCTaGCTGGGGGTCGGTGTAATC +
Preference number: 4 (lower is better)
Translates to: LMYLPSHPFTTNAYIVHEATLQT*LGVGVI
Trigger: GATTACACCGACCCCCAGCCAGGTTTGGAGGGTGGC...TTCATGTACTATGTATGCATTGGTGGTAAATGGATGTGAGGGCAAGTACATCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CCA 90 bp AATGTACTTGATGTACTTGCCCTCACATCCATTTACCACCAATGCATACATAGTGCCCGATACATGGCCTaGACCCACAGGATGCGGTCT +
Preference number: 4 (lower is better)
Translates to: NVLDVLALTSIYHQCIHSARYMA*THRMRS
Trigger: AGACCGCATCCTGTGGGTCCAGGCCATGTATCGGGC...ACTATGTATGCATTGGTGGTAAATGGATGTGAGGGCAAGTACATCAAGTACATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CCA 90 bp TTGATGTACTTGCCCTCACATCCATTTACCACCAATGCATACATAGTACATGAAGCCCGATACATGGCCTaGACCCACAGGATGCGGTCT +
Preference number: 4 (lower is better)
Translates to: LMYLPSHPFTTNAYIVHEARYMA*THRMRS
Trigger: AGACCGCATCCTGTGGGTCCAGGCCATGTATCGGGC...TTCATGTACTATGTATGCATTGGTGGTAAATGGATGTGAGGGCAAGTACATCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CCA 90 bp TCTTGGTACCACATAGCTAAAATGGCAGTTGTATTGATAAACATCTCATGGGCATGTGTGACTGCCCCGTaGCCCGATACATGGCCTGGA +
Preference number: 4 (lower is better)
Translates to: SWYHIAKMAVVLINISWACVTAP*PDTWPG
Trigger: TCCAGGCCATGTATCGGGCCACGGGGCAGTCACACA...TGCCCATGAGATGTTTATCAATACAACTGCCATTTTAGCTATGTGGTACCAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CCA 90 bp ATGGGTTTAACTAACAGACTAAGGACATGCACTGATTACAGGACTCTGTCCCAGTCTAGTACAAACACCTaGCCAGGACTGAACCAGCCC +
Preference number: 4 (lower is better)
Translates to: MGLTNRLRTCTDYRTLSQSSTNT*PGLNQP
Trigger: GGGCTGGTTCAGTCCTGGCCAGGTGTTTGTACTAGA...CTGGGACAGAGTCCTGTAATCAGTGCATGTCCTTAGTCTGTTAGTTAAACCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CCA 90 bp CAAACCCCAGGGTTGTGCAGTTACAGATCAAAATGCAATGTACATGACAGATATGGGTGGGGTCGATCATaGCGCCATTTTCTGCCCGTT +
Preference number: 4 (lower is better)
Translates to: QTPGLCSYRSKCNVHDRYGWGRS*RHFLPV
Trigger: AACGGGCAGAAAATGGCGCCATGATCGACCCCACCC...ATATCTGTCATGTACATTGCATTTTGATCTGTAACTGCACAACCCTGGGGTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CCA 90 bp ATGGGTTTAACTAACAGACTAAGGACATGCACTGATTACAGGACTCTGTCCCAGTGTAGTGAAGAAGGGTaGGGTCGATCATGGCGCCAT +
Preference number: 4 (lower is better)
Translates to: MGLTNRLRTCTDYRTLSQCSEEG*GRSWRH
Trigger: ATGGCGCCATGATCGACCCCACCCTTCTTCACTACA...CTGGGACAGAGTCCTGTAATCAGTGCATGTCCTTAGTCTGTTAGTTAAACCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CCA 90 bp TTCCATAACTGTAGGCTTTATATAAGGCAAAAGCAAGATGGATCCACTACTTTAGGAGAGGTGCGTCCGTaGACTCGAGGTGGGCAAGGG +
Preference number: 4 (lower is better)
Translates to: FHNCRLYIRQKQDGSTTLGEVRP*TRGGQG
Trigger: CCCTTGCCCACCTCGAGTCCACGGACGCACCTCTCC...TAAAGTAGTGGATCCATCTTGCTTTTGCCTTATATAAAGCCTACAGTTATGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CCA 90 bp ACGTTCCCTACACAGTACAGCACTTCTGAGACTATAGGTGTTGGCGGATACCACGGAGATGATTTGACATaGCACAAAGACGGGACATCA +
Preference number: 4 (lower is better)
Translates to: TFPTQYSTSETIGVGGYHGDDLT*HKDGTS
Trigger: TGATGTCCCGTCTTTGTGCCATGTCAAATCATCTCC...GTGGTATCCGCCAACACCTATAGTCTCAGAAGTGCTGTACTGTGTAGGGAACGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490353.2
CDS-3UTR TCA 90 bp TCTTGGTACCACATAGCTAAAATGGCAGTTGTATTGATAAACATCTCATGGGCAGCACAGTCTCCTTGCTaGGGCCGTCAATCTCAGGCA +
Preference number: 4 (lower is better)
Translates to: SWYHIAKMAVVLINISWAAQSPC*GRQSQA
Trigger: TGCCTGAGATTGACGGCCTCAGCAAGGAGACTGTGC...TGCCCATGAGATGTTTATCAATACAACTGCCATTTTAGCTATGTGGTACCAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR TCA 90 bp TTGGCGGATACCACTTCGTTTTGCTGGAATGCCCTTGCCACCCTTTCTGTACTTGATGTTCGAACTTCTTaGTCCCAAGAATGTTCTGGA +
Preference number: 4 (lower is better)
Translates to: LADTTSFCWNALATLSVLDVRTS*SQECSG
Trigger: TCCAGAACATTCTTGGGATCAAGAAGTTCGAACATC...AAGTACAGAAAGGGTGGCAAGGGCATTCCAGCAAAACGAAGTGGTATCCGCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490353.2
CDS-3UTR TCA 90 bp ATCGCCCCCTTGCCGTGGCAATTAAGAGAATCAATCCATTGGTATGTAGCCATCAATTACCACCTCCAATaGGAAAGACAGCACGACATC +
Preference number: 4 (lower is better)
Translates to: IAPLPWQLRESIHWYVAINYHLQ*ERQHDI
Trigger: GATGTCGTGCTGTCTTTCTCATTGGAGGTGGTAATT...GATGGCTACATACCAATGGATTGATTCTCTTAATTGCCACGGCAAGGGGGCGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR TCA 90 bp CAAACCCCAGGGTTGTGCAGTTACAGATCAAAATGCAATGTACATGACAGATATCGCCTGTGCTCTCTGTaGACAGCTTCACCTTCACAG +
Preference number: 4 (lower is better)
Translates to: QTPGLCSYRSKCNVHDRYRLCSL*TASPSQ
Trigger: CTGTGAAGGTGAAGCTGTTCACAGAGAGCACAGGCG...ATATCTGTCATGTACATTGCATTTTGATCTGTAACTGCACAACCCTGGGGTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR TCA 90 bp CAAACCCCAGGGTTGTGCAGTTACAGATCAAAATGCAATGTACATGACAGATATTTCCTCCCTTGGCGTTaGGTTTCTGGACTTGGGTCG +
Preference number: 4 (lower is better)
Translates to: QTPGLCSYRSKCNVHDRYFLPWR*VSGLGS
Trigger: CGACCCAAGTCCAGAAACTCAACGCCAAGGGAGGAA...ATATCTGTCATGTACATTGCATTTTGATCTGTAACTGCACAACCCTGGGGTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR TCA 90 bp AATGTACTTGATGTACTTGCCCTCACATCCATTTACCACCAATGCATACATAGTACACCTGGCCAGGACTaGACCAGCCCAGGCAAGAAT +
Preference number: 4 (lower is better)
Translates to: NVLDVLALTSIYHQCIHSTPGQD*TSPGKN
Trigger: ATTCTTGCCTGGGCTGGTTCAGTCCTGGCCAGGTGT...ACTATGTATGCATTGGTGGTAAATGGATGTGAGGGCAAGTACATCAAGTACATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283269.13
ENST00000383710.9
ENST00000612439.4
CDS-3UTR TCA 90 bp TTGATGTACTTGCCCTCACATCCATTTACCACCAATGCATACATAGTACATGAAACACCTGGCCAGGACTaGACCAGCCCAGGCAAGAAT +
Preference number: 4 (lower is better)
Translates to: LMYLPSHPFTTNAYIVHETPGQD*TSPGKN
Trigger: ATTCTTGCCTGGGCTGGTTCAGTCCTGGCCAGGTGT...TTCATGTACTATGTATGCATTGGTGGTAAATGGATGTGAGGGCAAGTACATCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283269.13
ENST00000383710.9
ENST00000612439.4
CDS-3UTR TCA 90 bp AGTCATGATAGGATCGCCCCCTTGCCGTGGCAATTAAGAGAATCAATCCATTGGCTCGGAGCCTCTCTTTaGTTTCTTCAAAACGTTCCT +
Preference number: 4 (lower is better)
Translates to: SHDRIAPLPWQLRESIHWLGASL*FLQNVP
Trigger: AGGAACGTTTTGAAGAAATCAAAGAGAGGCTCCGAG...CCAATGGATTGATTCTCTTAATTGCCACGGCAAGGGGGCGATCCTATCATGACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR TCA 90 bp ATGGGTTTAACTAACAGACTAAGGACATGCACTGATTACAGGACTCTGTCCCAGAGAGCCGAGAATAGTTaGCTAACGCAGCCTGTTCCA +
Preference number: 4 (lower is better)
Translates to: MGLTNRLRTCTDYRTLSQRAENS*LTQPVP
Trigger: TGGAACAGGCTGCGTTAGTCAACTATTCTCGGCTCT...CTGGGACAGAGTCCTGTAATCAGTGCATGTCCTTAGTCTGTTAGTTAAACCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR TCA 90 bp AGTCATGATAGGATCGCCCCCTTGCCGTGGCAATTAAGAGAATCAATCCATTGGAATGGATTGTGCAATTaGGGACTCCATCAGATCCAC +
Preference number: 4 (lower is better)
Translates to: SHDRIAPLPWQLRESIHWNGLCN*GLHQIH
Trigger: GTGGATCTGATGGAGTCCTCAATTGCACAATCCATT...CCAATGGATTGATTCTCTTAATTGCCACGGCAAGGGGGCGATCCTATCATGACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR TCA 90 bp ATGGGTTTAACTAACAGACTAAGGACATGCACTGATTACAGGACTCTGTCCCAGTCCCGAATGAAGGTCTaGAGGGCGTCAAGTTTCCAA +
Preference number: 4 (lower is better)
Translates to: MGLTNRLRTCTDYRTLSQSRMKV*RASSFQ
Trigger: TTGGAAACTTGACGCCCTTCAGACCTTCATTCGGGA...CTGGGACAGAGTCCTGTAATCAGTGCATGTCCTTAGTCTGTTAGTTAAACCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
CDS-3UTR TCA 90 bp CAAACCCCAGGGTTGTGCAGTTACAGATCAAAATGCAATGTACATGACAGATATAGTGCAGGTCCCGAATaGAGGTCTGAAGGGCGTCAA +
Preference number: 4 (lower is better)
Translates to: QTPGLCSYRSKCNVHDRYSAGPE*RSEGRQ
Trigger: TTGACGCCCTTCAGACCTTCATTCGGGACCTGCACT...ATATCTGTCATGTACATTGCATTTTGATCTGTAACTGCACAACCCTGGGGTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
CDS-3UTR TCA 90 bp AGTCATGATAGGATCGCCCCCTTGCCGTGGCAATTAAGAGAATCAATCCATTGGTGTACATCTCCTCATTaGCCTTATCACGCAGGACAT +
Preference number: 4 (lower is better)
Translates to: SHDRIAPLPWQLRESIHWCTSPH*PYHAGH
Trigger: ATGTCCTGCGTGATAAGGTCAATGAGGAGATGTACA...CCAATGGATTGATTCTCTTAATTGCCACGGCAAGGGGGCGATCCTATCATGACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
CDS-3UTR TCA 90 bp CAAACCCCAGGGTTGTGCAGTTACAGATCAAAATGCAATGTACATGACAGATATTGGCTTCCTCCACAGTaGGACGGTTCCGGATCGTTT +
Preference number: 4 (lower is better)
Translates to: QTPGLCSYRSKCNVHDRYWLPPQ*DGSGSF
Trigger: AAACGATCCGGAACCGTCTCACTGTGGAGGAAGCCA...ATATCTGTCATGTACATTGCATTTTGATCTGTAACTGCACAACCCTGGGGTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
CDS-3UTR TCA 90 bp TTGATGTACTTGCCCTCACATCCATTTACCACCAATGCATACATAGTACATGAACCCACCTTCACTCACTaGTGCTGTGGCTTCCTCCAC +
Preference number: 4 (lower is better)
Translates to: LMYLPSHPFTTNAYIVHEPTFTH*CCGFLH
Trigger: GTGGAGGAAGCCACAGCATCAGTGAGTGAAGGTGGG...TTCATGTACTATGTATGCATTGGTGGTAAATGGATGTGAGGGCAAGTACATCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
CDS-3UTR TCA 90 bp TCTTGGTACCACATAGCTAAAATGGCAGTTGTATTGATAAACATCTCATGGGCACCCACCTTCACTCACTaGTGCTGTGGCTTCCTCCAC +
Preference number: 4 (lower is better)
Translates to: SWYHIAKMAVVLINISWAPTFTH*CCGFLH
Trigger: GTGGAGGAAGCCACAGCATCAGTGAGTGAAGGTGGG...TGCCCATGAGATGTTTATCAATACAACTGCCATTTTAGCTATGTGGTACCAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
CDS-3UTR TCA 90 bp AATGTACTTGATGTACTTGCCCTCACATCCATTTACCACCAATGCATACATAGTCCCACCTTCACTCACTaGTGCTGTGGCTTCCTCCAC +
Preference number: 4 (lower is better)
Translates to: NVLDVLALTSIYHQCIHSPTFTH*CCGFLH
Trigger: GTGGAGGAAGCCACAGCATCAGTGAGTGAAGGTGGG...ACTATGTATGCATTGGTGGTAAATGGATGTGAGGGCAAGTACATCAAGTACATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
CDS-3UTR TCA 90 bp TTCCATAACTGTAGGCTTTATATAAGGCAAAAGCAAGATGGATCCACTACTTTACGCTGTCCTTCATGCTaGTGCCCTGCAGTCCCCCAC +
Preference number: 4 (lower is better)
Translates to: FHNCRLYIRQKQDGSTTLRCPSC*CPAVPH
Trigger: GTGGGGGACTGCAGGGCATCAGCATGAAGGACAGCG...TAAAGTAGTGGATCCATCTTGCTTTTGCCTTATATAAAGCCTACAGTTATGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
CDS-3UTR TCA 90 bp ATCGCCCCCTTGCCGTGGCAATTAAGAGAATCAATCCATTGGTATGTAGCCATCCATGGGCATGGTAGTTaGCAGAAAATTCCTAATGGG +
Preference number: 4 (lower is better)
Translates to: IAPLPWQLRESIHWYVAIHGHGS*QKIPNG
Trigger: CCCATTAGGAATTTTCTGTCAACTACCATGCCCATG...GATGGCTACATACCAATGGATTGATTCTCTTAATTGCCACGGCAAGGGGGCGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
CDS-3UTR TCA 90 bp ATCGCCCCCTTGCCGTGGCAATTAAGAGAATCAATCCATTGGTATGTAGCCATCCAGAGTGAATGTACTTaGTGTACTTGCCCTCACATC +
Preference number: 4 (lower is better)
Translates to: IAPLPWQLRESIHWYVAIQSECT*CTCPHI
Trigger: GATGTGAGGGCAAGTACATCAAGTACATTCACTCTG...GATGGCTACATACCAATGGATTGATTCTCTTAATTGCCACGGCAAGGGGGCGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
CDS-3UTR TCA 90 bp AGTCATGATAGGATCGCCCCCTTGCCGTGGCAATTAAGAGAATCAATCCATTGGCAGAGTGAATGTACTTaGTGTACTTGCCCTCACATC +
Preference number: 4 (lower is better)
Translates to: SHDRIAPLPWQLRESIHWQSECT*CTCPHI
Trigger: GATGTGAGGGCAAGTACATCAAGTACATTCACTCTG...CCAATGGATTGATTCTCTTAATTGCCACGGCAAGGGGGCGATCCTATCATGACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
CDS-3UTR GCA 90 bp CAAGAGCCATCTTCTCCAGGACCATTCTTTGGTTTTCTCAACAGAAGCAATCTGACGAACACATACAGCTaGAGCCTCTTCTTCCTCTCC +
Preference number: 4 (lower is better)
Translates to: QEPSSPGPFFGFLNRSNLTNTYS*SLFFLS
Trigger: GGAGAGGAAGAAGAGGCTGCAGCTGTATGTGTTCGT...CAGATTGCTTCTGTTGAGAAAACCAAAGAATGGTCCTGGAGAAGATGGCTCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490353.2
CDS-3UTR GCA 90 bp GAAAGAAATAGCTCTGCAGCAAACCCCAGGGTTGTGCAGTTACAGATCAAAATGCAATCTCAGGCAGGCTaGGCACTCTCTTCTCAATGT +
Preference number: 4 (lower is better)
Translates to: ERNSSAANPRVVQLQIKMQSQAG*ALSSQC
Trigger: ACATTGAGAAGAGAGTGCGCAGCCTGCCTGAGATTG...CATTTTGATCTGTAACTGCACAACCCTGGGGTTTGCTGCAGAGCTATTTCTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR GCA 90 bp CAGGGAAATACACAGACTATAGTGAAATTATTCAGTAAACAGAGATTGGGTACTGTCATCCGGGCCTGCTaGTTCCGCGGGTCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: QGNTQTIVKLFSKQRLGTVIRAC*FRGSSS
Trigger: AGAAGAGGACCCGCGGAAGCAGCAGGCCCGGATGAC...AGTACCCAATCTCTGTTTACTGAATAATTTCACTATAGTCTGTGTATTTCCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490353.2
CDS-3UTR GCA 90 bp GTCATAAAAGTTTTTCACACACACACACACACACACACACGCACACACATGCACCATAGAGTTGCTCCTTaGTCAGAATCAGCTCGGAGG +
Preference number: 4 (lower is better)
Translates to: VIKVFHTHTHTHTRTHMHHRVAP*SESARR
Trigger: CCTCCGAGCTGATTCTGAGCAAGGAGCAACTCTATG...GTGCATGTGTGTGCGTGTGTGTGTGTGTGTGTGTGTGTGAAAAACTTTTATGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000490353.2
CDS-3UTR GCA 90 bp ATCGCCCCCTTGCCGTGGCAATTAAGAGAATCAATCCATTGGTATGTAGCCATCTTCGATCATGTCACTTaGCATCAACTTCAGCCGTTG +
Preference number: 4 (lower is better)
Translates to: IAPLPWQLRESIHWYVAIFDHVT*HQLQPL
Trigger: CAACGGCTGAAGTTGATGGCAAGTGACATGATCGAA...GATGGCTACATACCAATGGATTGATTCTCTTAATTGCCACGGCAAGGGGGCGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
CDS-3UTR GCA 90 bp CAAACCCCAGGGTTGTGCAGTTACAGATCAAAATGCAATGTACATGACAGATATGGTCCGTCAACCAGGTaGAGATCACGTTCATGGAGC +
Preference number: 4 (lower is better)
Translates to: QTPGLCSYRSKCNVHDRYGPSTR*RSRSWS
Trigger: GCTCCATGAACGTGATCTGCACCTGGTTGACGGACC...ATATCTGTCATGTACATTGCATTTTGATCTGTAACTGCACAACCCTGGGGTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
CDS-3UTR GCA 90 bp AGTCATGATAGGATCGCCCCCTTGCCGTGGCAATTAAGAGAATCAATCCATTGGCAAACCCCAGGGTTGTaGAGTTACAGATCAAAATGC +
Preference number: 4 (lower is better)
Translates to: SHDRIAPLPWQLRESIHWQTPGL*SYRSKC
Trigger: GCATTTTGATCTGTAACTGCACAACCCTGGGGTTTG...CCAATGGATTGATTCTCTTAATTGCCACGGCAAGGGGGCGATCCTATCATGACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
CDS-3UTR CCA 90 bp TTCCATAACTGTAGGCTTTATATAAGGCAAAAGCAAGATGGATCCACTACTTTACCTCCCGGGAGTCGTTaGCGGAACAGCCTCCACTCT +
Preference number: 4 (lower is better)
Translates to: FHNCRLYIRQKQDGSTTLPPGSR*RNSLHS
Trigger: AGAGTGGAGGCTGTTCCGCCAACGACTCCCGGGAGG...TAAAGTAGTGGATCCATCTTGCTTTTGCCTTATATAAAGCCTACAGTTATGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CCA 90 bp GATACCACTTCGTTTTGCTGGAATGCCCTTGCCACCCTTTCTGTACTTGCAAATCTTCTCCACGGTAGATaGCATCAAATTTGGCCATCC +
Preference number: 4 (lower is better)
Translates to: DTTSFCWNALATLSVLANLLHGR*HQIWPS
Trigger: GGATGGCCAAATTTGATGCCATCTACCGTGGAGAAG...ATTTGCAAGTACAGAAAGGGTGGCAAGGGCATTCCAGCAAAACGAAGTGGTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490353.2
CDS-3UTR CCA 90 bp TTGATGTACTTGCCCTCACATCCATTTACCACCAATGCATACATAGTACATGAAGGCTGCTTGCTCATCTaGATTGTCCAGCTGGCAGGC +
Preference number: 4 (lower is better)
Translates to: LMYLPSHPFTTNAYIVHEGCLLI*IVQLAG
Trigger: GCCTGCCAGCTGGACAATCCAGATGAGCAAGCAGCC...TTCATGTACTATGTATGCATTGGTGGTAAATGGATGTGAGGGCAAGTACATCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CCA 90 bp TCTTGGTACCACATAGCTAAAATGGCAGTTGTATTGATAAACATCTCATGGGCAGCAGTGCATGGGTTGTaGAGAAGTCACCCTGGGTGC +
Preference number: 4 (lower is better)
Translates to: SWYHIAKMAVVLINISWAAVHGL*RSHPGC
Trigger: GCACCCAGGGTGACTTCTCCACAACCCATGCACTGC...TGCCCATGAGATGTTTATCAATACAACTGCCATTTTAGCTATGTGGTACCAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CCA 90 bp AATGTACTTGATGTACTTGCCCTCACATCCATTTACCACCAATGCATACATAGTGCAGTGCATGGGTTGTaGAGAAGTCACCCTGGGTGC +
Preference number: 4 (lower is better)
Translates to: NVLDVLALTSIYHQCIHSAVHGL*RSHPGC
Trigger: GCACCCAGGGTGACTTCTCCACAACCCATGCACTGC...ACTATGTATGCATTGGTGGTAAATGGATGTGAGGGCAAGTACATCAAGTACATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CCA 90 bp TTGATGTACTTGCCCTCACATCCATTTACCACCAATGCATACATAGTACATGAACTGTTCGGGGTGGGATaGAGAATAACCCGCCCAAGC +
Preference number: 4 (lower is better)
Translates to: LMYLPSHPFTTNAYIVHELFGVG*RITRPS
Trigger: GCTTGGGCGGGTTATTCTCCATCCCACCCCGAACAG...TTCATGTACTATGTATGCATTGGTGGTAAATGGATGTGAGGGCAAGTACATCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CCA 90 bp ATCGCCCCCTTGCCGTGGCAATTAAGAGAATCAATCCATTGGTATGTAGCCATCCTTGTTCATCGTCACTaGCAAATATCACGGTGTCTC +
Preference number: 4 (lower is better)
Translates to: IAPLPWQLRESIHWYVAILVHRH*QISRCL
Trigger: GAGACACCGTGATATTTGCCAGTGACGATGAACAAG...GATGGCTACATACCAATGGATTGATTCTCTTAATTGCCACGGCAAGGGGGCGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CCA 90 bp ATTGCTTGTAAACATATAGACATGGACATCAGGAAATCAGTGGATATGAAGGTCTGTGTGACTGCCCCGTaGCCCGATACATGGCCTGGA +
Preference number: 4 (lower is better)
Translates to: IACKHIDMDIRKSVDMKVCVTAP*PDTWPG
Trigger: TCCAGGCCATGTATCGGGCCACGGGGCAGTCACACA...GACCTTCATATCCACTGATTTCCTGATGTCCATGTCTATATGTTTACAAGCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CCA 90 bp CAAACCCCAGGGTTGTGCAGTTACAGATCAAAATGCAATGTACATGACAGATATTTGAGTTTCTGGACTTaGGTCGGGGGCACAGGCTTG +
Preference number: 4 (lower is better)
Translates to: QTPGLCSYRSKCNVHDRYLSFWT*VGGTGL
Trigger: CAAGCCTGTGCCCCCGACCCAAGTCCAGAAACTCAA...ATATCTGTCATGTACATTGCATTTTGATCTGTAACTGCACAACCCTGGGGTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CCA 90 bp TCTTGGTACCACATAGCTAAAATGGCAGTTGTATTGATAAACATCTCATGGGCAGGGTGGGGTCGATCATaGCGCCATTTTCTGCCCGTT +
Preference number: 4 (lower is better)
Translates to: SWYHIAKMAVVLINISWAGWGRS*RHFLPV
Trigger: AACGGGCAGAAAATGGCGCCATGATCGACCCCACCC...TGCCCATGAGATGTTTATCAATACAACTGCCATTTTAGCTATGTGGTACCAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CCA 90 bp TTGATGTACTTGCCCTCACATCCATTTACCACCAATGCATACATAGTACATGAAGGGTGGGGTCGATCATaGCGCCATTTTCTGCCCGTT +
Preference number: 4 (lower is better)
Translates to: LMYLPSHPFTTNAYIVHEGWGRS*RHFLPV
Trigger: AACGGGCAGAAAATGGCGCCATGATCGACCCCACCC...TTCATGTACTATGTATGCATTGGTGGTAAATGGATGTGAGGGCAAGTACATCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CCA 90 bp ATCGCCCCCTTGCCGTGGCAATTAAGAGAATCAATCCATTGGTATGTAGCCATCCAAAGCCCCTGTGAATaGATTGTGCAATTGAGGACT +
Preference number: 4 (lower is better)
Translates to: IAPLPWQLRESIHWYVAIQSPCE*IVQLRT
Trigger: AGTCCTCAATTGCACAATCCATTCACAGGGGCTTTG...GATGGCTACATACCAATGGATTGATTCTCTTAATTGCCACGGCAAGGGGGCGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CCA 90 bp ATGGGTTTAACTAACAGACTAAGGACATGCACTGATTACAGGACTCTGTCCCAGTCTTGCTGTTTAAGGTaGAGTCCAGGACCCCTTGCA +
Preference number: 4 (lower is better)
Translates to: MGLTNRLRTCTDYRTLSQSCCLR*SPGPLA
Trigger: TGCAAGGGGTCCTGGACTCCACCTTAAACAGCAAGA...CTGGGACAGAGTCCTGTAATCAGTGCATGTCCTTAGTCTGTTAGTTAAACCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
CDS-3UTR CCA 90 bp GAAAGAAATAGCTCTGCAGCAAACCCCAGGGTTGTGCAGTTACAGATCAAAATGAGGGTCTGTATTTGGTaGCAGCCCACTAAGGTACAC +
Preference number: 4 (lower is better)
Translates to: ERNSSAANPRVVQLQIKMRVCIW*QPTKVH
Trigger: GTGTACCTTAGTGGGCTGCCACCAAATACAGACCCT...CATTTTGATCTGTAACTGCACAACCCTGGGGTTTGCTGCAGAGCTATTTCTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612439.4
3UTR CAA 72 bp GCGCGCTTGATGTTAAGTCATGATAGGATCGCCCCCTaGCCGTGGCAATTAAGAGAATCAATCCATTGGTAT +
Preference number: 4 (lower is better)
Translates to: ARLMLSHDRIAP*PWQLRESIHWY
Trigger: ATACCAATGGATTGATTCTCTTAATTGCCACGGCAAGGGGGCGATCCTATCATGACTTAACATCAAGCGCGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
CDS-3UTR TCA 90 bp TCTTGGTACCACATAGCTAAAATGGCAGTTGTATTGATAAACATCTCATGGGCACCTGAAACCGGTCCTTaGCTGTCTGCAGCTGCTGTT +
Preference number: 4 (lower is better)
Translates to: SWYHIAKMAVVLINISWAPETGP*LSAAAV
Trigger: AACAGCAGCTGCAGACAGTCAAGGACCGGTTTCAGG...TGCCCATGAGATGTTTATCAATACAACTGCCATTTTAGCTATGTGGTACCAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR TCA 90 bp CAAACCCCAGGGTTGTGCAGTTACAGATCAAAATGCAATGTACATGACAGATATTCTCAATGTGCTTCTTaGAGACCTCCCGGGAGTCGT +
Preference number: 4 (lower is better)
Translates to: QTPGLCSYRSKCNVHDRYSQCAS*RPPGSR
Trigger: ACGACTCCCGGGAGGTCTTCAAGAAGCACATTGAGA...ATATCTGTCATGTACATTGCATTTTGATCTGTAACTGCACAACCCTGGGGTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR TCA 90 bp ATTGCTTGTAAACATATAGACATGGACATCAGGAAATCAGTGGATATGAAGGTCGCACAGTCTCCTTGCTaGGGCCGTCAATCTCAGGCA +
Preference number: 4 (lower is better)
Translates to: IACKHIDMDIRKSVDMKVAQSPC*GRQSQA
Trigger: TGCCTGAGATTGACGGCCTCAGCAAGGAGACTGTGC...GACCTTCATATCCACTGATTTCCTGATGTCCATGTCTATATGTTTACAAGCAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR TCA 90 bp ATCGCCCCCTTGCCGTGGCAATTAAGAGAATCAATCCATTGGTATGTAGCCATCGATGTTCGAACTTCTTaGTCCCAAGAATGTTCTGGA +
Preference number: 4 (lower is better)
Translates to: IAPLPWQLRESIHWYVAIDVRTS*SQECSG
Trigger: TCCAGAACATTCTTGGGATCAAGAAGTTCGAACATC...GATGGCTACATACCAATGGATTGATTCTCTTAATTGCCACGGCAAGGGGGCGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR TCA 90 bp TCTTGGTACCACATAGCTAAAATGGCAGTTGTATTGATAAACATCTCATGGGCACATCCAGCTCTCGTCTaGTCTGGGCTGCTTGCTCAT +
Preference number: 4 (lower is better)
Translates to: SWYHIAKMAVVLINISWAHPALV*SGLLAH
Trigger: ATGAGCAAGCAGCCCAGATCAGACGAGAGCTGGATG...TGCCCATGAGATGTTTATCAATACAACTGCCATTTTAGCTATGTGGTACCAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR TCA 90 bp TTGATGTACTTGCCCTCACATCCATTTACCACCAATGCATACATAGTACATGAACATCCAGCTCTCGTCTaGTCTGGGCTGCTTGCTCAT +
Preference number: 4 (lower is better)
Translates to: LMYLPSHPFTTNAYIVHEHPALV*SGLLAH
Trigger: ATGAGCAAGCAGCCCAGATCAGACGAGAGCTGGATG...TTCATGTACTATGTATGCATTGGTGGTAAATGGATGTGAGGGCAAGTACATCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR TCA 90 bp GAAAGAAATAGCTCTGCAGCAAACCCCAGGGTTGTGCAGTTACAGATCAAAATGATGGCAAACGTGTACTaGCTGACCTGCACCAATACA +
Preference number: 4 (lower is better)
Translates to: ERNSSAANPRVVQLQIKMMANVY*LTCTNT
Trigger: TGTATTGGTGCAGGTCAGTCAGTACACGTTTGCCAT...CATTTTGATCTGTAACTGCACAACCCTGGGGTTTGCTGCAGAGCTATTTCTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR TCA 90 bp ATGGGTTTAACTAACAGACTAAGGACATGCACTGATTACAGGACTCTGTCCCAGAATTGTAGAAGTTCCTaGGGCTCCGCTTTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: MGLTNRLRTCTDYRTLSQNCRSS*GSAFFS
Trigger: GGAGAAGAAAGCGGAGCCTCAGGAACTTCTACAATT...CTGGGACAGAGTCCTGTAATCAGTGCATGTCCTTAGTCTGTTAGTTAAACCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR TCA 90 bp TTGATGTACTTGCCCTCACATCCATTTACCACCAATGCATACATAGTACATGAATTCCTCCCTTGGCGTTaGGTTTCTGGACTTGGGTCG +
Preference number: 4 (lower is better)
Translates to: LMYLPSHPFTTNAYIVHEFLPWR*VSGLGS
Trigger: CGACCCAAGTCCAGAAACTCAACGCCAAGGGAGGAA...TTCATGTACTATGTATGCATTGGTGGTAAATGGATGTGAGGGCAAGTACATCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR TCA 90 bp CAAACCCCAGGGTTGTGCAGTTACAGATCAAAATGCAATGTACATGACAGATATTGCCTGACCCATTATTaGCTGGTTCCCATGACTCCC +
Preference number: 4 (lower is better)
Translates to: QTPGLCSYRSKCNVHDRYCLTHY*LVPMTP
Trigger: GGGAGTCATGGGAACCAGTCAATAATGGGTCAGGCA...ATATCTGTCATGTACATTGCATTTTGATCTGTAACTGCACAACCCTGGGGTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357948.7
ENST00000612439.4
CDS-3UTR TCA 90 bp AGTCATGATAGGATCGCCCCCTTGCCGTGGCAATTAAGAGAATCAATCCATTGGGCTGCAAAGTTTTGTTaGTTGAGCTTTGGCATCAAC +
Preference number: 4 (lower is better)
Translates to: SHDRIAPLPWQLRESIHWAAKFC*LSFGIN
Trigger: GTTGATGCCAAAGCTCAATCAACAAAACTTTGCAGC...CCAATGGATTGATTCTCTTAATTGCCACGGCAAGGGGGCGATCCTATCATGACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
CDS-3UTR TCA 90 bp AATGTACTTGATGTACTTGCCCTCACATCCATTTACCACCAATGCATACATAGTTCACGCAGGACATCCTaGGAATGGCGGACGAAAGTC +
Preference number: 4 (lower is better)
Translates to: NVLDVLALTSIYHQCIHSSRRTS*EWRTKV
Trigger: GACTTTCGTCCGCCATTCTCAGGATGTCCTGCGTGA...ACTATGTATGCATTGGTGGTAAATGGATGTGAGGGCAAGTACATCAAGTACATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
CDS-3UTR TCA 90 bp TCTTGGTACCACATAGCTAAAATGGCAGTTGTATTGATAAACATCTCATGGGCATCACGCAGGACATCCTaGGAATGGCGGACGAAAGTC +
Preference number: 4 (lower is better)
Translates to: SWYHIAKMAVVLINISWASRRTS*EWRTKV
Trigger: GACTTTCGTCCGCCATTCTCAGGATGTCCTGCGTGA...TGCCCATGAGATGTTTATCAATACAACTGCCATTTTAGCTATGTGGTACCAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
CDS-3UTR TCA 90 bp AATGTACTTGATGTACTTGCCCTCACATCCATTTACCACCAATGCATACATAGTTGGCTTCCTCCACAGTaGGACGGTTCCGGATCGTTT +
Preference number: 4 (lower is better)
Translates to: NVLDVLALTSIYHQCIHSWLPPQ*DGSGSF
Trigger: AAACGATCCGGAACCGTCTCACTGTGGAGGAAGCCA...ACTATGTATGCATTGGTGGTAAATGGATGTGAGGGCAAGTACATCAAGTACATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
CDS-3UTR TCA 90 bp ATGGGTTTAACTAACAGACTAAGGACATGCACTGATTACAGGACTCTGTCCCAGACTAAGGACATGCACTaGTTACAGGACTCTGTCCCA +
Preference number: 4 (lower is better)
Translates to: MGLTNRLRTCTDYRTLSQTKDMH*LQDSVP
Trigger: TGGGACAGAGTCCTGTAATCAGTGCATGTCCTTAGT...CTGGGACAGAGTCCTGTAATCAGTGCATGTCCTTAGTCTGTTAGTTAAACCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
CDS-3UTR TCA 90 bp GAAAGAAATAGCTCTGCAGCAAACCCCAGGGTTGTGCAGTTACAGATCAAAATGACTAAGGACATGCACTaGTTACAGGACTCTGTCCCA +
Preference number: 4 (lower is better)
Translates to: ERNSSAANPRVVQLQIKMTKDMH*LQDSVP
Trigger: TGGGACAGAGTCCTGTAATCAGTGCATGTCCTTAGT...CATTTTGATCTGTAACTGCACAACCCTGGGGTTTGCTGCAGAGCTATTTCTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
CDS-3UTR TCA 90 bp TCTTGGTACCACATAGCTAAAATGGCAGTTGTATTGATAAACATCTCATGGGCAACACCTGGCCAGGACTaGACCAGCCCATCTCAAAGA +
Preference number: 4 (lower is better)
Translates to: SWYHIAKMAVVLINISWATPGQD*TSPSQR
Trigger: TCTTTGAGATGGGCTGGTTCAGTCCTGGCCAGGTGT...TGCCCATGAGATGTTTATCAATACAACTGCCATTTTAGCTATGTGGTACCAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357948.7
CDS-3UTR GCA 90 bp TCTTGGTACCACATAGCTAAAATGGCAGTTGTATTGATAAACATCTCATGGGCATCCTCCTCCTCTTTCTaGAGCCGCTCCAACTCTTCC +
Preference number: 4 (lower is better)
Translates to: SWYHIAKMAVVLINISWASSSSF*SRSNSS
Trigger: GGAAGAGTTGGAGCGGCTGCAGAAAGAGGAGGAGGA...TGCCCATGAGATGTTTATCAATACAACTGCCATTTTAGCTATGTGGTACCAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR GCA 90 bp ATTGCTTGTAAACATATAGACATGGACATCAGGAAATCAGTGGATATGAAGGTCTTGCTGATCTTCTGCTaGCGGCGAGCCATGTCGGTG +
Preference number: 4 (lower is better)
Translates to: IACKHIDMDIRKSVDMKVLLIFC*RRAMSV
Trigger: CACCGACATGGCTCGCCGGCAGCAGAAGATCAGCAA...GACCTTCATATCCACTGATTTCCTGATGTCCATGTCTATATGTTTACAAGCAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR GCA 90 bp AATGTACTTGATGTACTTGCCCTCACATCCATTTACCACCAATGCATACATAGTTGTTTGCTGATCTTCTaGTGCCGGCGAGCCATGTCG +
Preference number: 4 (lower is better)
Translates to: NVLDVLALTSIYHQCIHSCLLIF*CRRAMS
Trigger: CGACATGGCTCGCCGGCAGCAGAAGATCAGCAAACA...ACTATGTATGCATTGGTGGTAAATGGATGTGAGGGCAAGTACATCAAGTACATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR GCA 90 bp TTGATGTACTTGCCCTCACATCCATTTACCACCAATGCATACATAGTACATGAATGTTTGCTGATCTTCTaGTGCCGGCGAGCCATGTCG +
Preference number: 4 (lower is better)
Translates to: LMYLPSHPFTTNAYIVHECLLIF*CRRAMS
Trigger: CGACATGGCTCGCCGGCAGCAGAAGATCAGCAAACA...TTCATGTACTATGTATGCATTGGTGGTAAATGGATGTGAGGGCAAGTACATCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR GCA 90 bp ATGGGTTTAACTAACAGACTAAGGACATGCACTGATTACAGGACTCTGTCCCAGTTGACTGTCTGCAGCTaGTGTTTGCTGATCTTCTGC +
Preference number: 4 (lower is better)
Translates to: MGLTNRLRTCTDYRTLSQLTVCS*CLLIFC
Trigger: GCAGAAGATCAGCAAACAGCAGCTGCAGACAGTCAA...CTGGGACAGAGTCCTGTAATCAGTGCATGTCCTTAGTCTGTTAGTTAAACCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR GCA 90 bp AGTCATGATAGGATCGCCCCCTTGCCGTGGCAATTAAGAGAATCAATCCATTGGCAAACTTGGGAAATTTaGGTTCCCTGGCTATTTGGT +
Preference number: 4 (lower is better)
Translates to: SHDRIAPLPWQLRESIHWQTWEI*VPWLFG
Trigger: ACCAAATAGCCAGGGAACGCAAATTTCCCAAGTTTG...CCAATGGATTGATTCTCTTAATTGCCACGGCAAGGGGGCGATCCTATCATGACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR GCA 90 bp AGTCATGATAGGATCGCCCCCTTGCCGTGGCAATTAAGAGAATCAATCCATTGGCTTCCACCTCCATTGTaGAATATACGATGCGATTTG +
Preference number: 4 (lower is better)
Translates to: SHDRIAPLPWQLRESIHWLPPPL*NIRCDL
Trigger: CAAATCGCATCGTATATTGCACAATGGAGGTGGAAG...CCAATGGATTGATTCTCTTAATTGCCACGGCAAGGGGGCGATCCTATCATGACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR GCA 90 bp ATCGCCCCCTTGCCGTGGCAATTAAGAGAATCAATCCATTGGTATGTAGCCATCCTTCCACCTCCATTGTaGAATATACGATGCGATTTG +
Preference number: 4 (lower is better)
Translates to: IAPLPWQLRESIHWYVAILPPPL*NIRCDL
Trigger: CAAATCGCATCGTATATTGCACAATGGAGGTGGAAG...GATGGCTACATACCAATGGATTGATTCTCTTAATTGCCACGGCAAGGGGGCGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR GCA 90 bp CAAACCCCAGGGTTGTGCAGTTACAGATCAAAATGCAATGTACATGACAGATATCTTCACAGCTGGCAGTaGATGGGTTGTGGAGAAGTC +
Preference number: 4 (lower is better)
Translates to: QTPGLCSYRSKCNVHDRYLHSWQ*MGCGEV
Trigger: GACTTCTCCACAACCCATGCACTGCCAGCTGTGAAG...ATATCTGTCATGTACATTGCATTTTGATCTGTAACTGCACAACCCTGGGGTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR GCA 90 bp TTGATGTACTTGCCCTCACATCCATTTACCACCAATGCATACATAGTACATGAACCTGGACCCACAGGATaGGGTCTTGTTCATCGTCAC +
Preference number: 4 (lower is better)
Translates to: LMYLPSHPFTTNAYIVHEPGPTG*GLVHRH
Trigger: GTGACGATGAACAAGACCGCATCCTGTGGGTCCAGG...TTCATGTACTATGTATGCATTGGTGGTAAATGGATGTGAGGGCAAGTACATCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR GCA 90 bp TCTTGGTACCACATAGCTAAAATGGCAGTTGTATTGATAAACATCTCATGGGCACCTGGACCCACAGGATaGGGTCTTGTTCATCGTCAC +
Preference number: 4 (lower is better)
Translates to: SWYHIAKMAVVLINISWAPGPTG*GLVHRH
Trigger: GTGACGATGAACAAGACCGCATCCTGTGGGTCCAGG...TGCCCATGAGATGTTTATCAATACAACTGCCATTTTAGCTATGTGGTACCAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR GCA 90 bp ATTGCTTGTAAACATATAGACATGGACATCAGGAAATCAGTGGATATGAAGGTCACAGGCTTGTGTGACTaGCCCGTGGCCCGATACATG +
Preference number: 4 (lower is better)
Translates to: IACKHIDMDIRKSVDMKVTGLCD*PVARYM
Trigger: CATGTATCGGGCCACGGGGCAGTCACACAAGCCTGT...GACCTTCATATCCACTGATTTCCTGATGTCCATGTCTATATGTTTACAAGCAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR GCA 90 bp TCTTGGTACCACATAGCTAAAATGGCAGTTGTATTGATAAACATCTCATGGGCACCACGCAAAGGCCTCTaGGTGGTGCTCCTCATTTTG +
Preference number: 4 (lower is better)
Translates to: SWYHIAKMAVVLINISWAPRKGL*VVLLIL
Trigger: CAAAATGAGGAGCACCACGCAGAGGCCTTTGCGTGG...TGCCCATGAGATGTTTATCAATACAACTGCCATTTTAGCTATGTGGTACCAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000612439.4
CDS-3UTR GCA 90 bp GAAAGAAATAGCTCTGCAGCAAACCCCAGGGTTGTGCAGTTACAGATCAAAATGAGGAACGTCTCCGCATaGTCCACCATTAAATCTGAC +
Preference number: 4 (lower is better)
Translates to: ERNSSAANPRVVQLQIKMRNVSA*STIKSD
Trigger: GTCAGATTTAATGGTGGAGCATGCGGAGACGTTCCT...CATTTTGATCTGTAACTGCACAACCCTGGGGTTTGCTGCAGAGCTATTTCTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR GCA 90 bp AGTCATGATAGGATCGCCCCCTTGCCGTGGCAATTAAGAGAATCAATCCATTGGGGCCCATTTCCATGCTaGAAAGTTTTGTTGATTGAG +
Preference number: 4 (lower is better)
Translates to: SHDRIAPLPWQLRESIHWGPFPC*KVLLIE
Trigger: CTCAATCAACAAAACTTTGCAGCATGGAAATGGGCC...CCAATGGATTGATTCTCTTAATTGCCACGGCAAGGGGGCGATCCTATCATGACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
CDS-3UTR GCA 90 bp AATGTACTTGATGTACTTGCCCTCACATCCATTTACCACCAATGCATACATAGTGGTCCGTCAACCAGGTaGAGATCACGTTCATGGAGC +
Preference number: 4 (lower is better)
Translates to: NVLDVLALTSIYHQCIHSGPSTR*RSRSWS
Trigger: GCTCCATGAACGTGATCTGCACCTGGTTGACGGACC...ACTATGTATGCATTGGTGGTAAATGGATGTGAGGGCAAGTACATCAAGTACATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
CDS-3UTR GCA 90 bp TTGATGTACTTGCCCTCACATCCATTTACCACCAATGCATACATAGTACATGAATTCATGCTGATGCCCTaGAGTCCCCCACCTTCACTC +
Preference number: 4 (lower is better)
Translates to: LMYLPSHPFTTNAYIVHEFMLMP*SPPPSL
Trigger: GAGTGAAGGTGGGGGACTGCAGGGCATCAGCATGAA...TTCATGTACTATGTATGCATTGGTGGTAAATGGATGTGAGGGCAAGTACATCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
CDS-3UTR GCA 90 bp TCTTGGTACCACATAGCTAAAATGGCAGTTGTATTGATAAACATCTCATGGGCATTCATGCTGATGCCCTaGAGTCCCCCACCTTCACTC +
Preference number: 4 (lower is better)
Translates to: SWYHIAKMAVVLINISWAFMLMP*SPPPSL
Trigger: GAGTGAAGGTGGGGGACTGCAGGGCATCAGCATGAA...TGCCCATGAGATGTTTATCAATACAACTGCCATTTTAGCTATGTGGTACCAAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
CDS-3UTR GCA 90 bp AATGTACTTGATGTACTTGCCCTCACATCCATTTACCACCAATGCATACATAGTTTCATGCTGATGCCCTaGAGTCCCCCACCTTCACTC +
Preference number: 4 (lower is better)
Translates to: NVLDVLALTSIYHQCIHSFMLMP*SPPPSL
Trigger: GAGTGAAGGTGGGGGACTGCAGGGCATCAGCATGAA...ACTATGTATGCATTGGTGGTAAATGGATGTGAGGGCAAGTACATCAAGTACATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
CDS-3UTR GCA 90 bp ATCGCCCCCTTGCCGTGGCAATTAAGAGAATCAATCCATTGGTATGTAGCCATCAACAGACTAAGGACATaGACTGATTACAGGACTCTG +
Preference number: 4 (lower is better)
Translates to: IAPLPWQLRESIHWYVAINRLRT*TDYRTL
Trigger: CAGAGTCCTGTAATCAGTGCATGTCCTTAGTCTGTT...GATGGCTACATACCAATGGATTGATTCTCTTAATTGCCACGGCAAGGGGGCGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
CDS-3UTR GCA 90 bp AGTCATGATAGGATCGCCCCCTTGCCGTGGCAATTAAGAGAATCAATCCATTGGCCGGCCTACATTTTCTaGATCCTTTTGATTCTCTTC +
Preference number: 4 (lower is better)
Translates to: SHDRIAPLPWQLRESIHWPAYIF*ILLILF
Trigger: GAAGAGAATCAAAAGGATGCAGAAAATGTAGGCCGG...CCAATGGATTGATTCTCTTAATTGCCACGGCAAGGGGGCGATCCTATCATGACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000383710.9
CDS-3UTR CCA 90 bp ATGGGTTTAACTAACAGACTAAGGACATGCACTGATTACAGGACTCTGTCCCAGAGATGGCATCAAATTTaGCCATCCAGGAGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: MGLTNRLRTCTDYRTLSQRWHQI*PSRSSA
Trigger: TGCTGAGCTCCTGGATGGCCAAATTTGATGCCATCT...CTGGGACAGAGTCCTGTAATCAGTGCATGTCCTTAGTCTGTTAGTTAAACCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CCA 90 bp GAAAGAAATAGCTCTGCAGCAAACCCCAGGGTTGTGCAGTTACAGATCAAAATGAGATGGCATCAAATTTaGCCATCCAGGAGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: ERNSSAANPRVVQLQIKMRWHQI*PSRSSA
Trigger: TGCTGAGCTCCTGGATGGCCAAATTTGATGCCATCT...CATTTTGATCTGTAACTGCACAACCCTGGGGTTTGCTGCAGAGCTATTTCTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CCA 90 bp GAAAGAAATAGCTCTGCAGCAAACCCCAGGGTTGTGCAGTTACAGATCAAAATGCTTCTCCACGGTAGATaGCATCAAATTTGGCCATCC +
Preference number: 4 (lower is better)
Translates to: ERNSSAANPRVVQLQIKMLLHGR*HQIWPS
Trigger: GGATGGCCAAATTTGATGCCATCTACCGTGGAGAAG...CATTTTGATCTGTAACTGCACAACCCTGGGGTTTGCTGCAGAGCTATTTCTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CCA 90 bp ATTGCTTGTAAACATATAGACATGGACATCAGGAAATCAGTGGATATGAAGGTCGGCTGCTTGCTCATCTaGATTGTCCAGCTGGCAGGC +
Preference number: 4 (lower is better)
Translates to: IACKHIDMDIRKSVDMKVGCLLI*IVQLAG
Trigger: GCCTGCCAGCTGGACAATCCAGATGAGCAAGCAGCC...GACCTTCATATCCACTGATTTCCTGATGTCCATGTCTATATGTTTACAAGCAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CCA 90 bp ATGGGTTTAACTAACAGACTAAGGACATGCACTGATTACAGGACTCTGTCCCAGCGTTCCCTGGCTATTTaGTCTGCCATTTGTAGACGT +
Preference number: 4 (lower is better)
Translates to: MGLTNRLRTCTDYRTLSQRSLAI*SAICRR
Trigger: ACGTCTACAAATGGCAGACCAAATAGCCAGGGAACG...CTGGGACAGAGTCCTGTAATCAGTGCATGTCCTTAGTCTGTTAGTTAAACCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CCA 90 bp GAAAGAAATAGCTCTGCAGCAAACCCCAGGGTTGTGCAGTTACAGATCAAAATGCGTTCCCTGGCTATTTaGTCTGCCATTTGTAGACGT +
Preference number: 4 (lower is better)
Translates to: ERNSSAANPRVVQLQIKMRSLAI*SAICRR
Trigger: ACGTCTACAAATGGCAGACCAAATAGCCAGGGAACG...CATTTTGATCTGTAACTGCACAACCCTGGGGTTTGCTGCAGAGCTATTTCTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CCA 90 bp ATCGCCCCCTTGCCGTGGCAATTAAGAGAATCAATCCATTGGTATGTAGCCATCCTTTGGATACAAACTTaGGAAATTTGCGTTCCCTGG +
Preference number: 4 (lower is better)
Translates to: IAPLPWQLRESIHWYVAILWIQT*EICVPW
Trigger: CCAGGGAACGCAAATTTCCCAAGTTTGTATCCAAAG...GATGGCTACATACCAATGGATTGATTCTCTTAATTGCCACGGCAAGGGGGCGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CCA 90 bp AATGTACTTGATGTACTTGCCCTCACATCCATTTACCACCAATGCATACATAGTTCTGACTTGGAGAGCTaGTTCTCACTCTCCTCGCCC +
Preference number: 4 (lower is better)
Translates to: NVLDVLALTSIYHQCIHSSDLES*FSLSSP
Trigger: GGGCGAGGAGAGTGAGAACCAGCTCTCCAAGTCAGA...ACTATGTATGCATTGGTGGTAAATGGATGTGAGGGCAAGTACATCAAGTACATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CCA 90 bp TTCCATAACTGTAGGCTTTATATAAGGCAAAAGCAAGATGGATCCACTACTTTACTGGGTGCCCCAGGTTaGTTTAGAAGCCTCGGCCTG +
Preference number: 4 (lower is better)
Translates to: FHNCRLYIRQKQDGSTTLLGAPG*FRSLGL
Trigger: CAGGCCGAGGCTTCTAAACCAACCTGGGGCACCCAG...TAAAGTAGTGGATCCATCTTGCTTTTGCCTTATATAAAGCCTACAGTTATGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CCA 90 bp TTGATGTACTTGCCCTCACATCCATTTACCACCAATGCATACATAGTACATGAAGTGGAGAAGTCACCCTaGGTGCCCCAGGTTGGTTTA +
Preference number: 4 (lower is better)
Translates to: LMYLPSHPFTTNAYIVHEVEKSP*VPQVGL
Trigger: TAAACCAACCTGGGGCACCCAGGGTGACTTCTCCAC...TTCATGTACTATGTATGCATTGGTGGTAAATGGATGTGAGGGCAAGTACATCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CCA 90 bp AATGTACTTGATGTACTTGCCCTCACATCCATTTACCACCAATGCATACATAGTACAGCTGGCAGTGCATaGGTTGTGGAGAAGTCACCC +
Preference number: 4 (lower is better)
Translates to: NVLDVLALTSIYHQCIHSTAGSA*VVEKSP
Trigger: GGGTGACTTCTCCACAACCCATGCACTGCCAGCTGT...ACTATGTATGCATTGGTGGTAAATGGATGTGAGGGCAAGTACATCAAGTACATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CCA 90 bp TCTTGGTACCACATAGCTAAAATGGCAGTTGTATTGATAAACATCTCATGGGCAACAGCTGGCAGTGCATaGGTTGTGGAGAAGTCACCC +
Preference number: 4 (lower is better)
Translates to: SWYHIAKMAVVLINISWATAGSA*VVEKSP
Trigger: GGGTGACTTCTCCACAACCCATGCACTGCCAGCTGT...TGCCCATGAGATGTTTATCAATACAACTGCCATTTTAGCTATGTGGTACCAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CCA 90 bp ATTGCTTGTAAACATATAGACATGGACATCAGGAAATCAGTGGATATGAAGGTCGCCACTCTGACTGTTTaGGGCTGTTCGGGGTGGGAT +
Preference number: 4 (lower is better)
Translates to: IACKHIDMDIRKSVDMKVATLTV*GCSGWD
Trigger: ATCCCACCCCGAACAGCCCCAAACAGTCAGAGTGGC...GACCTTCATATCCACTGATTTCCTGATGTCCATGTCTATATGTTTACAAGCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CCA 90 bp TTCCATAACTGTAGGCTTTATATAAGGCAAAAGCAAGATGGATCCACTACTTTAGCCCGATACATGGCCTaGACCCACAGGATGCGGTCT +
Preference number: 4 (lower is better)
Translates to: FHNCRLYIRQKQDGSTTLARYMA*THRMRS
Trigger: AGACCGCATCCTGTGGGTCCAGGCCATGTATCGGGC...TAAAGTAGTGGATCCATCTTGCTTTTGCCTTATATAAAGCCTACAGTTATGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CCA 90 bp TTGATGTACTTGCCCTCACATCCATTTACCACCAATGCATACATAGTACATGAATTGAGTTTCTGGACTTaGGTCGGGGGCACAGGCTTG +
Preference number: 4 (lower is better)
Translates to: LMYLPSHPFTTNAYIVHELSFWT*VGGTGL
Trigger: CAAGCCTGTGCCCCCGACCCAAGTCCAGAAACTCAA...TTCATGTACTATGTATGCATTGGTGGTAAATGGATGTGAGGGCAAGTACATCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CCA 90 bp TCTTGGTACCACATAGCTAAAATGGCAGTTGTATTGATAAACATCTCATGGGCATTGGCGTTGAGTTTCTaGACTTGGGTCGGGGGCACA +
Preference number: 4 (lower is better)
Translates to: SWYHIAKMAVVLINISWALALSF*TWVGGT
Trigger: TGTGCCCCCGACCCAAGTCCAGAAACTCAACGCCAA...TGCCCATGAGATGTTTATCAATACAACTGCCATTTTAGCTATGTGGTACCAAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CCA 90 bp GAAAGAAATAGCTCTGCAGCAAACCCCAGGGTTGTGCAGTTACAGATCAAAATGTCAAAGAGGGAAGCGTaGTCAAAGTTACAGGGGTTG +
Preference number: 4 (lower is better)
Translates to: ERNSSAANPRVVQLQIKMSKREA*SKLQGL
Trigger: CAACCCCTGTAACTTTGACCACGCTTCCCTCTTTGA...CATTTTGATCTGTAACTGCACAACCCTGGGGTTTGCTGCAGAGCTATTTCTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CCA 90 bp ATCGCCCCCTTGCCGTGGCAATTAAGAGAATCAATCCATTGGTATGTAGCCATCCTCCTCTTGTGGCACTaGGGTAACAATATCTTTCAT +
Preference number: 4 (lower is better)
Translates to: IAPLPWQLRESIHWYVAILLLWH*GNNIFH
Trigger: ATGAAAGATATTGTTACCCCAGTGCCACAAGAGGAG...GATGGCTACATACCAATGGATTGATTCTCTTAATTGCCACGGCAAGGGGGCGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CCA 90 bp AGTCATGATAGGATCGCCCCCTTGCCGTGGCAATTAAGAGAATCAATCCATTGGTGCAGATCACGTTCATaGAGCTGTTGTACCATTGAT +
Preference number: 4 (lower is better)
Translates to: SHDRIAPLPWQLRESIHWCRSRS*SCCTID
Trigger: ATCAATGGTACAACAGCTCCATGAACGTGATCTGCA...CCAATGGATTGATTCTCTTAATTGCCACGGCAAGGGGGCGATCCTATCATGACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
CDS-3UTR CCA 90 bp ATCGCCCCCTTGCCGTGGCAATTAAGAGAATCAATCCATTGGTATGTAGCCATCGACTCTAGGACCAAATaGTCTAATCGTCTTCTTCGT +
Preference number: 4 (lower is better)
Translates to: IAPLPWQLRESIHWYVAIDSRTK*SNRLLR
Trigger: ACGAAGAAGACGATTAGACCATTTGGTCCTAGAGTC...GATGGCTACATACCAATGGATTGATTCTCTTAATTGCCACGGCAAGGGGGCGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
CDS-3UTR CCA 90 bp ATGGGTTTAACTAACAGACTAAGGACATGCACTGATTACAGGACTCTGTCCCAGATCGCCCCCTTGCCGTaGCAATTAAGAGAATCAATC +
Preference number: 4 (lower is better)
Translates to: MGLTNRLRTCTDYRTLSQIAPLP*QLRESI
Trigger: GATTGATTCTCTTAATTGCCACGGCAAGGGGGCGAT...CTGGGACAGAGTCCTGTAATCAGTGCATGTCCTTAGTCTGTTAGTTAAACCCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
CDS-3UTR CCA 90 bp ACGTTCCCTACACAGTACAGCACTTCTGAGACTATAGGTGTTGGCGGATACCACTCCAGGACCATTCTTTaGTTTTCTCAACAGAAGCAA +
Preference number: 4 (lower is better)
Translates to: TFPTQYSTSETIGVGGYHSRTIL*FSQQKQ
Trigger: TTGCTTCTGTTGAGAAAACCAAAGAATGGTCCTGGA...GTGGTATCCGCCAACACCTATAGTCTCAGAAGTGCTGTACTGTGTAGGGAACGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490353.2
3UTR CAA 72 bp CGTTTTGCTGGAATGCCCTTGCCACCCTTTCTGTACTaGCAAATGCTTTCTAGCCAAATTCAAGGGCCATTT +
Preference number: 4 (lower is better)
Translates to: RFAGMPLPPFLY*QMLSSQIQGPF
Trigger: AAATGGCCCTTGAATTTGGCTAGAAAGCATTTGCAAGTACAGAAAGGGTGGCAAGGGCATTCCAGCAAAACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490353.2
CDS-3UTR TCA 90 bp TCTTGGTACCACATAGCTAAAATGGCAGTTGTATTGATAAACATCTCATGGGCAAGACAGCACGACATCTaGCTTGGAGAGCTGGTTCTC +
Preference number: 4 (lower is better)
Translates to: SWYHIAKMAVVLINISWARQHDI*LGELVL
Trigger: GAGAACCAGCTCTCCAAGTCAGATGTCGTGCTGTCT...TGCCCATGAGATGTTTATCAATACAACTGCCATTTTAGCTATGTGGTACCAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR TCA 90 bp TTGATGTACTTGCCCTCACATCCATTTACCACCAATGCATACATAGTACATGAAAGACAGCACGACATCTaGCTTGGAGAGCTGGTTCTC +
Preference number: 4 (lower is better)
Translates to: LMYLPSHPFTTNAYIVHERQHDI*LGELVL
Trigger: GAGAACCAGCTCTCCAAGTCAGATGTCGTGCTGTCT...TTCATGTACTATGTATGCATTGGTGGTAAATGGATGTGAGGGCAAGTACATCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR TCA 90 bp ATGGGTTTAACTAACAGACTAAGGACATGCACTGATTACAGGACTCTGTCCCAGAATTACCACCTCCAATaGGAAAGACAGCACGACATC +
Preference number: 4 (lower is better)
Translates to: MGLTNRLRTCTDYRTLSQNYHLQ*ERQHDI
Trigger: GATGTCGTGCTGTCTTTCTCATTGGAGGTGGTAATT...CTGGGACAGAGTCCTGTAATCAGTGCATGTCCTTAGTCTGTTAGTTAAACCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR TCA 90 bp ATTGCTTGTAAACATATAGACATGGACATCAGGAAATCAGTGGATATGAAGGTCCGCCTGTGCTCTCTGTaGACAGCTTCACCTTCACAG +
Preference number: 4 (lower is better)
Translates to: IACKHIDMDIRKSVDMKVRLCSL*TASPSQ
Trigger: CTGTGAAGGTGAAGCTGTTCACAGAGAGCACAGGCG...GACCTTCATATCCACTGATTTCCTGATGTCCATGTCTATATGTTTACAAGCAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR TCA 90 bp AATGTACTTGATGTACTTGCCCTCACATCCATTTACCACCAATGCATACATAGTCATTTTGTGCCACTCTaGCTGTTTGGGGCTGTTCGG +
Preference number: 4 (lower is better)
Translates to: NVLDVLALTSIYHQCIHSHFVPL*LFGAVR
Trigger: CCGAACAGCCCCAAACAGTCAGAGTGGCACAAAATG...ACTATGTATGCATTGGTGGTAAATGGATGTGAGGGCAAGTACATCAAGTACATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR TCA 90 bp TCTTGGTACCACATAGCTAAAATGGCAGTTGTATTGATAAACATCTCATGGGCACATTTTGTGCCACTCTaGCTGTTTGGGGCTGTTCGG +
Preference number: 4 (lower is better)
Translates to: SWYHIAKMAVVLINISWAHFVPL*LFGAVR
Trigger: CCGAACAGCCCCAAACAGTCAGAGTGGCACAAAATG...TGCCCATGAGATGTTTATCAATACAACTGCCATTTTAGCTATGTGGTACCAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR TCA 90 bp ATTGCTTGTAAACATATAGACATGGACATCAGGAAATCAGTGGATATGAAGGTCTTCCTCCCTTGGCGTTaGGTTTCTGGACTTGGGTCG +
Preference number: 4 (lower is better)
Translates to: IACKHIDMDIRKSVDMKVFLPWR*VSGLGS
Trigger: CGACCCAAGTCCAGAAACTCAACGCCAAGGGAGGAA...GACCTTCATATCCACTGATTTCCTGATGTCCATGTCTATATGTTTACAAGCAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR TCA 90 bp CAAACCCCAGGGTTGTGCAGTTACAGATCAAAATGCAATGTACATGACAGATATAGAGCCGAGAATAGTTaGCTAACGCAGCCTGTTCCA +
Preference number: 4 (lower is better)
Translates to: QTPGLCSYRSKCNVHDRYRAENS*LTQPVP
Trigger: TGGAACAGGCTGCGTTAGTCAACTATTCTCGGCTCT...ATATCTGTCATGTACATTGCATTTTGATCTGTAACTGCACAACCCTGGGGTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR TCA 90 bp ATGGGTTTAACTAACAGACTAAGGACATGCACTGATTACAGGACTCTGTCCCAGGATTTTGGCATACTCTaGGAGCCGAGAATAGTTGAC +
Preference number: 4 (lower is better)
Translates to: MGLTNRLRTCTDYRTLSQDFGIL*EPRIVD
Trigger: GTCAACTATTCTCGGCTCTCAGAGTATGCCAAAATC...CTGGGACAGAGTCCTGTAATCAGTGCATGTCCTTAGTCTGTTAGTTAAACCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR TCA 90 bp ATGGGTTTAACTAACAGACTAAGGACATGCACTGATTACAGGACTCTGTCCCAGGCTTTTTGGCAGGAGTaGTTAACCGGCCTACATTTT +
Preference number: 4 (lower is better)
Translates to: MGLTNRLRTCTDYRTLSQAFWQE*LTGLHF
Trigger: AAAATGTAGGCCGGTTAATCACTCCTGCCAAAAAGC...CTGGGACAGAGTCCTGTAATCAGTGCATGTCCTTAGTCTGTTAGTTAAACCCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR TCA 90 bp TCTTGGTACCACATAGCTAAAATGGCAGTTGTATTGATAAACATCTCATGGGCAGTCTACTGCAAAGAGTaGCAGGAACGTCTCCGCATG +
Preference number: 4 (lower is better)
Translates to: SWYHIAKMAVVLINISWAVYCKE*QERLRM
Trigger: CATGCGGAGACGTTCCTGTCACTCTTTGCAGTAGAC...TGCCCATGAGATGTTTATCAATACAACTGCCATTTTAGCTATGTGGTACCAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR TCA 90 bp TTGATGTACTTGCCCTCACATCCATTTACCACCAATGCATACATAGTACATGAAGTCTACTGCAAAGAGTaGCAGGAACGTCTCCGCATG +
Preference number: 4 (lower is better)
Translates to: LMYLPSHPFTTNAYIVHEVYCKE*QERLRM
Trigger: CATGCGGAGACGTTCCTGTCACTCTTTGCAGTAGAC...TTCATGTACTATGTATGCATTGGTGGTAAATGGATGTGAGGGCAAGTACATCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR TCA 90 bp ATTGCTTGTAAACATATAGACATGGACATCAGGAAATCAGTGGATATGAAGGTCATTGACTGGTTCCCATaGCTCCCGCTCAAAGCCCCT +
Preference number: 4 (lower is better)
Translates to: IACKHIDMDIRKSVDMKVIDWFP*LPLKAP
Trigger: AGGGGCTTTGAGCGGGAGTCATGGGAACCAGTCAAT...GACCTTCATATCCACTGATTTCCTGATGTCCATGTCTATATGTTTACAAGCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000612439.4
CDS-3UTR TCA 90 bp ATTGCTTGTAAACATATAGACATGGACATCAGGAAATCAGTGGATATGAAGGTCTCACGCAGGACATCCTaGGAATGGCGGACGAAAGTC +
Preference number: 4 (lower is better)
Translates to: IACKHIDMDIRKSVDMKVSRRTS*EWRTKV
Trigger: GACTTTCGTCCGCCATTCTCAGGATGTCCTGCGTGA...GACCTTCATATCCACTGATTTCCTGATGTCCATGTCTATATGTTTACAAGCAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
CDS-3UTR TCA 90 bp ATGGGTTTAACTAACAGACTAAGGACATGCACTGATTACAGGACTCTGTCCCAGTGTACATCTCCTCATTaGCCTTATCACGCAGGACAT +
Preference number: 4 (lower is better)
Translates to: MGLTNRLRTCTDYRTLSQCTSPH*PYHAGH
Trigger: ATGTCCTGCGTGATAAGGTCAATGAGGAGATGTACA...CTGGGACAGAGTCCTGTAATCAGTGCATGTCCTTAGTCTGTTAGTTAAACCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
CDS-3UTR TCA 90 bp ATTGCTTGTAAACATATAGACATGGACATCAGGAAATCAGTGGATATGAAGGTCTGGCTTCCTCCACAGTaGGACGGTTCCGGATCGTTT +
Preference number: 4 (lower is better)
Translates to: IACKHIDMDIRKSVDMKVWLPPQ*DGSGSF
Trigger: AAACGATCCGGAACCGTCTCACTGTGGAGGAAGCCA...GACCTTCATATCCACTGATTTCCTGATGTCCATGTCTATATGTTTACAAGCAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
CDS-3UTR TCA 90 bp TTCCATAACTGTAGGCTTTATATAAGGCAAAAGCAAGATGGATCCACTACTTTACCCACCTTCACTCACTaGTGCTGTGGCTTCCTCCAC +
Preference number: 4 (lower is better)
Translates to: FHNCRLYIRQKQDGSTTLPTFTH*CCGFLH
Trigger: GTGGAGGAAGCCACAGCATCAGTGAGTGAAGGTGGG...TAAAGTAGTGGATCCATCTTGCTTTTGCCTTATATAAAGCCTACAGTTATGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
CDS-3UTR TCA 90 bp ATGGGTTTAACTAACAGACTAAGGACATGCACTGATTACAGGACTCTGTCCCAGCAGAGTGAATGTACTTaGTGTACTTGCCCTCACATC +
Preference number: 4 (lower is better)
Translates to: MGLTNRLRTCTDYRTLSQQSECT*CTCPHI
Trigger: GATGTGAGGGCAAGTACATCAAGTACATTCACTCTG...CTGGGACAGAGTCCTGTAATCAGTGCATGTCCTTAGTCTGTTAGTTAAACCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
CDS-3UTR TCA 90 bp GATACCACTTCGTTTTGCTGGAATGCCCTTGCCACCCTTTCTGTACTTGCAAATAGAGATTGGGTACTGTaGCTCTTCAAGCACAAATCT +
Preference number: 4 (lower is better)
Translates to: DTTSFCWNALATLSVLANRDWVL*LFKHKS
Trigger: AGATTTGTGCTTGAAGAGTCACAGTACCCAATCTCT...ATTTGCAAGTACAGAAAGGGTGGCAAGGGCATTCCAGCAAAACGAAGTGGTATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490353.2
CDS-3UTR GCA 90 bp TTGATGTACTTGCCCTCACATCCATTTACCACCAATGCATACATAGTACATGAACGGTCCTTGACTGTCTaGAGCTGCTGTTTGCTGATC +
Preference number: 4 (lower is better)
Translates to: LMYLPSHPFTTNAYIVHERSLTV*SCCLLI
Trigger: GATCAGCAAACAGCAGCTGCAGACAGTCAAGGACCG...TTCATGTACTATGTATGCATTGGTGGTAAATGGATGTGAGGGCAAGTACATCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR GCA 90 bp ATGGGTTTAACTAACAGACTAAGGACATGCACTGATTACAGGACTCTGTCCCAGTCTTCTCCCGATAACTaGACATGGCAAACGTGTACT +
Preference number: 4 (lower is better)
Translates to: MGLTNRLRTCTDYRTLSQSSPDN*TWQTCT
Trigger: AGTACACGTTTGCCATGTGCAGTTATCGGGAGAAGA...CTGGGACAGAGTCCTGTAATCAGTGCATGTCCTTAGTCTGTTAGTTAAACCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR GCA 90 bp ATTGCTTGTAAACATATAGACATGGACATCAGGAAATCAGTGGATATGAAGGTCCCACGCAAAGGCCTCTaGGTGGTGCTCCTCATTTTG +
Preference number: 4 (lower is better)
Translates to: IACKHIDMDIRKSVDMKVPRKGL*VVLLIL
Trigger: CAAAATGAGGAGCACCACGCAGAGGCCTTTGCGTGG...GACCTTCATATCCACTGATTTCCTGATGTCCATGTCTATATGTTTACAAGCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000612439.4
CDS-3UTR GCA 90 bp TTGATGTACTTGCCCTCACATCCATTTACCACCAATGCATACATAGTACATGAACATGTGTCTGGAGGTTaGACCTCTAAGGCTGCATCC +
Preference number: 4 (lower is better)
Translates to: LMYLPSHPFTTNAYIVHEHVSGG*TSKAAS
Trigger: GGATGCAGCCTTAGAGGTGCAACCTCCAGACACATG...TTCATGTACTATGTATGCATTGGTGGTAAATGGATGTGAGGGCAAGTACATCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR GCA 90 bp TCTTGGTACCACATAGCTAAAATGGCAGTTGTATTGATAAACATCTCATGGGCACATGTGTCTGGAGGTTaGACCTCTAAGGCTGCATCC +
Preference number: 4 (lower is better)
Translates to: SWYHIAKMAVVLINISWAHVSGG*TSKAAS
Trigger: GGATGCAGCCTTAGAGGTGCAACCTCCAGACACATG...TGCCCATGAGATGTTTATCAATACAACTGCCATTTTAGCTATGTGGTACCAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR GCA 90 bp AATGTACTTGATGTACTTGCCCTCACATCCATTTACCACCAATGCATACATAGTCATGTGTCTGGAGGTTaGACCTCTAAGGCTGCATCC +
Preference number: 4 (lower is better)
Translates to: NVLDVLALTSIYHQCIHSHVSGG*TSKAAS
Trigger: GGATGCAGCCTTAGAGGTGCAACCTCCAGACACATG...ACTATGTATGCATTGGTGGTAAATGGATGTGAGGGCAAGTACATCAAGTACATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR GCA 90 bp TTGATGTACTTGCCCTCACATCCATTTACCACCAATGCATACATAGTACATGAATCTTCTTCAGGCCAGTaGAGGTCCCGAATGAAGGTC +
Preference number: 4 (lower is better)
Translates to: LMYLPSHPFTTNAYIVHESSSGQ*RSRMKV
Trigger: GACCTTCATTCGGGACCTGCACTGGCCTGAAGAAGA...TTCATGTACTATGTATGCATTGGTGGTAAATGGATGTGAGGGCAAGTACATCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
CDS-3UTR GCA 90 bp TCTTGGTACCACATAGCTAAAATGGCAGTTGTATTGATAAACATCTCATGGGCATCTTCTTCAGGCCAGTaGAGGTCCCGAATGAAGGTC +
Preference number: 4 (lower is better)
Translates to: SWYHIAKMAVVLINISWASSSGQ*RSRMKV
Trigger: GACCTTCATTCGGGACCTGCACTGGCCTGAAGAAGA...TGCCCATGAGATGTTTATCAATACAACTGCCATTTTAGCTATGTGGTACCAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
CDS-3UTR GCA 90 bp ATGGGTTTAACTAACAGACTAAGGACATGCACTGATTACAGGACTCTGTCCCAGTTCGATCATGTCACTTaGCATCAACTTCAGCCGTTG +
Preference number: 4 (lower is better)
Translates to: MGLTNRLRTCTDYRTLSQFDHVT*HQLQPL
Trigger: CAACGGCTGAAGTTGATGGCAAGTGACATGATCGAA...CTGGGACAGAGTCCTGTAATCAGTGCATGTCCTTAGTCTGTTAGTTAAACCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
CDS-3UTR GCA 90 bp ATCGCCCCCTTGCCGTGGCAATTAAGAGAATCAATCCATTGGTATGTAGCCATCCTTGGCCCATTTCCATaGTGCAAAGTTTTGTTGATT +
Preference number: 4 (lower is better)
Translates to: IAPLPWQLRESIHWYVAILGPFP*CKVLLI
Trigger: AATCAACAAAACTTTGCAGCATGGAAATGGGCCAAG...GATGGCTACATACCAATGGATTGATTCTCTTAATTGCCACGGCAAGGGGGCGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
CDS-3UTR GCA 90 bp AGTCATGATAGGATCGCCCCCTTGCCGTGGCAATTAAGAGAATCAATCCATTGGCTTGGCCCATTTCCATaGTGCAAAGTTTTGTTGATT +
Preference number: 4 (lower is better)
Translates to: SHDRIAPLPWQLRESIHWLGPFP*CKVLLI
Trigger: AATCAACAAAACTTTGCAGCATGGAAATGGGCCAAG...CCAATGGATTGATTCTCTTAATTGCCACGGCAAGGGGGCGATCCTATCATGACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
CDS-3UTR GCA 90 bp ATTGCTTGTAAACATATAGACATGGACATCAGGAAATCAGTGGATATGAAGGTCGGTCCGTCAACCAGGTaGAGATCACGTTCATGGAGC +
Preference number: 4 (lower is better)
Translates to: IACKHIDMDIRKSVDMKVGPSTR*RSRSWS
Trigger: GCTCCATGAACGTGATCTGCACCTGGTTGACGGACC...GACCTTCATATCCACTGATTTCCTGATGTCCATGTCTATATGTTTACAAGCAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
CDS-3UTR GCA 90 bp ATCGCCCCCTTGCCGTGGCAATTAAGAGAATCAATCCATTGGTATGTAGCCATCACAGTAGTTTTGAACTaGGCGCTTGATGTTAAGTCA +
Preference number: 4 (lower is better)
Translates to: IAPLPWQLRESIHWYVAITVVLN*ALDVKS
Trigger: TGACTTAACATCAAGCGCGCAGTTCAAAACTACTGT...GATGGCTACATACCAATGGATTGATTCTCTTAATTGCCACGGCAAGGGGGCGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
CDS-3UTR GCA 90 bp AGTCATGATAGGATCGCCCCCTTGCCGTGGCAATTAAGAGAATCAATCCATTGGACAGTAGTTTTGAACTaGGCGCTTGATGTTAAGTCA +
Preference number: 4 (lower is better)
Translates to: SHDRIAPLPWQLRESIHWTVVLN*ALDVKS
Trigger: TGACTTAACATCAAGCGCGCAGTTCAAAACTACTGT...CCAATGGATTGATTCTCTTAATTGCCACGGCAAGGGGGCGATCCTATCATGACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
CDS-3UTR GCA 90 bp ATGGGTTTAACTAACAGACTAAGGACATGCACTGATTACAGGACTCTGTCCCAGCAAACCCCAGGGTTGTaGAGTTACAGATCAAAATGC +
Preference number: 4 (lower is better)
Translates to: MGLTNRLRTCTDYRTLSQQTPGL*SYRSKC
Trigger: GCATTTTGATCTGTAACTGCACAACCCTGGGGTTTG...CTGGGACAGAGTCCTGTAATCAGTGCATGTCCTTAGTCTGTTAGTTAAACCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
CDS-3UTR GCA 90 bp GAAAGAAATAGCTCTGCAGCAAACCCCAGGGTTGTGCAGTTACAGATCAAAATGCAAACCCCAGGGTTGTaGAGTTACAGATCAAAATGC +
Preference number: 4 (lower is better)
Translates to: ERNSSAANPRVVQLQIKMQTPGL*SYRSKC
Trigger: GCATTTTGATCTGTAACTGCACAACCCTGGGGTTTG...CATTTTGATCTGTAACTGCACAACCCTGGGGTTTGCTGCAGAGCTATTTCTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
CDS-3UTR GCA 90 bp ATGCCCTTGCCACCCTTTCTGTACTTGCAAATGCTTTCTAGCCAAATTCAAGGGTCAACAGAAGCAATCTaGAGTTTTCCCCAGAATGGA +
Preference number: 4 (lower is better)
Translates to: MPLPPFLYLQMLSSQIQGSTEAI*SFPQNG
Trigger: TCCATTCTGGGGAAAACTGCAGATTGCTTCTGTTGA...CCCTTGAATTTGGCTAGAAAGCATTTGCAAGTACAGAAAGGGTGGCAAGGGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490353.2
CDS-3UTR CCA 90 bp TTCCATAACTGTAGGCTTTATATAAGGCAAAAGCAAGATGGATCCACTACTTTAGGCTGCTTGCTCATCTaGATTGTCCAGCTGGCAGGC +
Preference number: 4 (lower is better)
Translates to: FHNCRLYIRQKQDGSTTLGCLLI*IVQLAG
Trigger: GCCTGCCAGCTGGACAATCCAGATGAGCAAGCAGCC...TAAAGTAGTGGATCCATCTTGCTTTTGCCTTATATAAAGCCTACAGTTATGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CCA 90 bp TTGATGTACTTGCCCTCACATCCATTTACCACCAATGCATACATAGTACATGAAAGCTCTCGTCTGATCTaGGCTGCTTGCTCATCTGGA +
Preference number: 4 (lower is better)
Translates to: LMYLPSHPFTTNAYIVHESSRLI*AACSSG
Trigger: TCCAGATGAGCAAGCAGCCCAGATCAGACGAGAGCT...TTCATGTACTATGTATGCATTGGTGGTAAATGGATGTGAGGGCAAGTACATCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CCA 90 bp TTGATGTACTTGCCCTCACATCCATTTACCACCAATGCATACATAGTACATGAACTGCGTTTGAGTTTCTaGAGCTTGAACTCCCCGCCT +
Preference number: 4 (lower is better)
Translates to: LMYLPSHPFTTNAYIVHELRLSF*SLNSPP
Trigger: AGGCGGGGAGTTCAAGCTCCAGAAACTCAAACGCAG...TTCATGTACTATGTATGCATTGGTGGTAAATGGATGTGAGGGCAAGTACATCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CCA 90 bp AATGTACTTGATGTACTTGCCCTCACATCCATTTACCACCAATGCATACATAGTCTTCACCTTCACAGCTaGCAGTGCATGGGTTGTGGA +
Preference number: 4 (lower is better)
Translates to: NVLDVLALTSIYHQCIHSLHLHS*QCMGCG
Trigger: TCCACAACCCATGCACTGCCAGCTGTGAAGGTGAAG...ACTATGTATGCATTGGTGGTAAATGGATGTGAGGGCAAGTACATCAAGTACATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CCA 90 bp TCTTGGTACCACATAGCTAAAATGGCAGTTGTATTGATAAACATCTCATGGGCACTTCACCTTCACAGCTaGCAGTGCATGGGTTGTGGA +
Preference number: 4 (lower is better)
Translates to: SWYHIAKMAVVLINISWALHLHS*QCMGCG
Trigger: TCCACAACCCATGCACTGCCAGCTGTGAAGGTGAAG...TGCCCATGAGATGTTTATCAATACAACTGCCATTTTAGCTATGTGGTACCAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CCA 90 bp TTCCATAACTGTAGGCTTTATATAAGGCAAAAGCAAGATGGATCCACTACTTTAGCCACTCTGACTGTTTaGGGCTGTTCGGGGTGGGAT +
Preference number: 4 (lower is better)
Translates to: FHNCRLYIRQKQDGSTTLATLTV*GCSGWD
Trigger: ATCCCACCCCGAACAGCCCCAAACAGTCAGAGTGGC...TAAAGTAGTGGATCCATCTTGCTTTTGCCTTATATAAAGCCTACAGTTATGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CCA 90 bp ATCGCCCCCTTGCCGTGGCAATTAAGAGAATCAATCCATTGGTATGTAGCCATCAGACATTCTTACCGATaGCCCATAAATACCCAGAAT +
Preference number: 4 (lower is better)
Translates to: IAPLPWQLRESIHWYVAIRHSYR*PINTQN
Trigger: ATTCTGGGTATTTATGGGCCATCGGTAAGAATGTCT...GATGGCTACATACCAATGGATTGATTCTCTTAATTGCCACGGCAAGGGGGCGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CCA 90 bp AGTCATGATAGGATCGCCCCCTTGCCGTGGCAATTAAGAGAATCAATCCATTGGAGACATTCTTACCGATaGCCCATAAATACCCAGAAT +
Preference number: 4 (lower is better)
Translates to: SHDRIAPLPWQLRESIHWRHSYR*PINTQN
Trigger: ATTCTGGGTATTTATGGGCCATCGGTAAGAATGTCT...CCAATGGATTGATTCTCTTAATTGCCACGGCAAGGGGGCGATCCTATCATGACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CCA 90 bp GAAAGAAATAGCTCTGCAGCAAACCCCAGGGTTGTGCAGTTACAGATCAAAATGCTTGTTCATCGTCACTaGCAAATATCACGGTGTCTC +
Preference number: 4 (lower is better)
Translates to: ERNSSAANPRVVQLQIKMLVHRH*QISRCL
Trigger: GAGACACCGTGATATTTGCCAGTGACGATGAACAAG...CATTTTGATCTGTAACTGCACAACCCTGGGGTTTGCTGCAGAGCTATTTCTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CCA 90 bp ATTGCTTGTAAACATATAGACATGGACATCAGGAAATCAGTGGATATGAAGGTCTTGGCGTTGAGTTTCTaGACTTGGGTCGGGGGCACA +
Preference number: 4 (lower is better)
Translates to: IACKHIDMDIRKSVDMKVLALSF*TWVGGT
Trigger: TGTGCCCCCGACCCAAGTCCAGAAACTCAACGCCAA...GACCTTCATATCCACTGATTTCCTGATGTCCATGTCTATATGTTTACAAGCAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CCA 90 bp TTGATGTACTTGCCCTCACATCCATTTACCACCAATGCATACATAGTACATGAATCTAGTACAAACACCTaGCCAGGACTGAACCAGCCC +
Preference number: 4 (lower is better)
Translates to: LMYLPSHPFTTNAYIVHESSTNT*PGLNQP
Trigger: GGGCTGGTTCAGTCCTGGCCAGGTGTTTGTACTAGA...TTCATGTACTATGTATGCATTGGTGGTAAATGGATGTGAGGGCAAGTACATCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CCA 90 bp AATGTACTTGATGTACTTGCCCTCACATCCATTTACCACCAATGCATACATAGTTCTAGTACAAACACCTaGCCAGGACTGAACCAGCCC +
Preference number: 4 (lower is better)
Translates to: NVLDVLALTSIYHQCIHSSSTNT*PGLNQP
Trigger: GGGCTGGTTCAGTCCTGGCCAGGTGTTTGTACTAGA...ACTATGTATGCATTGGTGGTAAATGGATGTGAGGGCAAGTACATCAAGTACATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CCA 90 bp TCTTGGTACCACATAGCTAAAATGGCAGTTGTATTGATAAACATCTCATGGGCATGTAGTGAAGAAGGGTaGGGTCGATCATGGCGCCAT +
Preference number: 4 (lower is better)
Translates to: SWYHIAKMAVVLINISWACSEEG*GRSWRH
Trigger: ATGGCGCCATGATCGACCCCACCCTTCTTCACTACA...TGCCCATGAGATGTTTATCAATACAACTGCCATTTTAGCTATGTGGTACCAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CCA 90 bp TTGATGTACTTGCCCTCACATCCATTTACCACCAATGCATACATAGTACATGAATGTAGTGAAGAAGGGTaGGGTCGATCATGGCGCCAT +
Preference number: 4 (lower is better)
Translates to: LMYLPSHPFTTNAYIVHECSEEG*GRSWRH
Trigger: ATGGCGCCATGATCGACCCCACCCTTCTTCACTACA...TTCATGTACTATGTATGCATTGGTGGTAAATGGATGTGAGGGCAAGTACATCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CCA 90 bp TCTTGGTACCACATAGCTAAAATGGCAGTTGTATTGATAAACATCTCATGGGCATCAGGCCTGTTCCCATaGACATGGGATGCACAGAAG +
Preference number: 4 (lower is better)
Translates to: SWYHIAKMAVVLINISWASGLFP*TWDAQK
Trigger: CTTCTGTGCATCCCATGTCCATGGGAACAGGCCTGA...TGCCCATGAGATGTTTATCAATACAACTGCCATTTTAGCTATGTGGTACCAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
CDS-3UTR CCA 90 bp ATGGGTTTAACTAACAGACTAAGGACATGCACTGATTACAGGACTCTGTCCCAGTTTTCCCTTCGATTTTaGCATACTCTGAGAGCCGAG +
Preference number: 4 (lower is better)
Translates to: MGLTNRLRTCTDYRTLSQFSLRF*HTLRAE
Trigger: CTCGGCTCTCAGAGTATGCCAAAATCGAAGGGAAAA...CTGGGACAGAGTCCTGTAATCAGTGCATGTCCTTAGTCTGTTAGTTAAACCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000283269.13
CDS-3UTR CCA 90 bp ATGGGTTTAACTAACAGACTAAGGACATGCACTGATTACAGGACTCTGTCCCAGGTTAAATCCATCACTTaGGAGGCCAAGCAGAAGACA +
Preference number: 4 (lower is better)
Translates to: MGLTNRLRTCTDYRTLSQVKSIT*EAKQKT
Trigger: TGTCTTCTGCTTGGCCTCCCAAGTGATGGATTTAAC...CTGGGACAGAGTCCTGTAATCAGTGCATGTCCTTAGTCTGTTAGTTAAACCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000283269.13
CDS-3UTR CCA 90 bp ATTGCTTGTAAACATATAGACATGGACATCAGGAAATCAGTGGATATGAAGGTCTCCGTGGACTCGAGGTaGGCAAGGGGGAGAATCAAT +
Preference number: 4 (lower is better)
Translates to: IACKHIDMDIRKSVDMKVSVDSR*ARGRIN
Trigger: ATTGATTCTCCCCCTTGCCCACCTCGAGTCCACGGA...GACCTTCATATCCACTGATTTCCTGATGTCCATGTCTATATGTTTACAAGCAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CCA 90 bp ATGGGTTTAACTAACAGACTAAGGACATGCACTGATTACAGGACTCTGTCCCAGTGGGAAGGTTCACATTaGGTAGGTTCACATTGGGTA +
Preference number: 4 (lower is better)
Translates to: MGLTNRLRTCTDYRTLSQWEGSH*VGSHWV
Trigger: TACCCAATGTGAACCTACCCAATGTGAACCTTCCCA...CTGGGACAGAGTCCTGTAATCAGTGCATGTCCTTAGTCTGTTAGTTAAACCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383710.9
ENST00000473635.5
CDS-3UTR CCA 90 bp ATCGCCCCCTTGCCGTGGCAATTAAGAGAATCAATCCATTGGTATGTAGCCATCGTAGATTTGGTACTTTaGGAAGGTTCACATTGGGTA +
Preference number: 4 (lower is better)
Translates to: IAPLPWQLRESIHWYVAIVDLVL*EGSHWV
Trigger: TACCCAATGTGAACCTTCCCAAAGTACCAAATCTAC...GATGGCTACATACCAATGGATTGATTCTCTTAATTGCCACGGCAAGGGGGCGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000383710.9
ENST00000473635.5
CDS-3UTR CCA 90 bp ATCGCCCCCTTGCCGTGGCAATTAAGAGAATCAATCCATTGGTATGTAGCCATCATTTTAGCAAACTCTTaGCCCATTTCCATGCTGCAA +
Preference number: 4 (lower is better)
Translates to: IAPLPWQLRESIHWYVAIILANS*PISMLQ
Trigger: TTGCAGCATGGAAATGGGCCAAGAGTTTGCTAAAAT...GATGGCTACATACCAATGGATTGATTCTCTTAATTGCCACGGCAAGGGGGCGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000473635.5
ENST00000613879.4
CDS-3UTR TCA 90 bp ATTGCTTGTAAACATATAGACATGGACATCAGGAAATCAGTGGATATGAAGGTCTCTCAATGTGCTTCTTaGAGACCTCCCGGGAGTCGT +
Preference number: 4 (lower is better)
Translates to: IACKHIDMDIRKSVDMKVSQCAS*RPPGSR
Trigger: ACGACTCCCGGGAGGTCTTCAAGAAGCACATTGAGA...GACCTTCATATCCACTGATTTCCTGATGTCCATGTCTATATGTTTACAAGCAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR TCA 90 bp TTCCATAACTGTAGGCTTTATATAAGGCAAAAGCAAGATGGATCCACTACTTTACATCCAGCTCTCGTCTaGTCTGGGCTGCTTGCTCAT +
Preference number: 4 (lower is better)
Translates to: FHNCRLYIRQKQDGSTTLHPALV*SGLLAH
Trigger: ATGAGCAAGCAGCCCAGATCAGACGAGAGCTGGATG...TAAAGTAGTGGATCCATCTTGCTTTTGCCTTATATAAAGCCTACAGTTATGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR TCA 90 bp CAGGGAAATACACAGACTATAGTGAAATTATTCAGTAAACAGAGATTGGGTACTCATCCAGCTCTCGTCTaGTCTGGGCTGCTTGCTCAT +
Preference number: 4 (lower is better)
Translates to: QGNTQTIVKLFSKQRLGTHPALV*SGLLAH
Trigger: ATGAGCAAGCAGCCCAGATCAGACGAGAGCTGGATG...AGTACCCAATCTCTGTTTACTGAATAATTTCACTATAGTCTGTGTATTTCCCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490353.2
CDS-3UTR TCA 90 bp ATTGCTTGTAAACATATAGACATGGACATCAGGAAATCAGTGGATATGAAGGTCCATTTTGTGCCACTCTaGCTGTTTGGGGCTGTTCGG +
Preference number: 4 (lower is better)
Translates to: IACKHIDMDIRKSVDMKVHFVPL*LFGAVR
Trigger: CCGAACAGCCCCAAACAGTCAGAGTGGCACAAAATG...GACCTTCATATCCACTGATTTCCTGATGTCCATGTCTATATGTTTACAAGCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR TCA 90 bp ATGGGTTTAACTAACAGACTAAGGACATGCACTGATTACAGGACTCTGTCCCAGGAATGCTTCATGTTTTaGGGCTTATCCATTCGGACA +
Preference number: 4 (lower is better)
Translates to: MGLTNRLRTCTDYRTLSQECFMF*GLSIRT
Trigger: TGTCCGAATGGATAAGCCTCAAAACATGAAGCATTC...CTGGGACAGAGTCCTGTAATCAGTGCATGTCCTTAGTCTGTTAGTTAAACCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR TCA 90 bp GAAAGAAATAGCTCTGCAGCAAACCCCAGGGTTGTGCAGTTACAGATCAAAATGGAATGCTTCATGTTTTaGGGCTTATCCATTCGGACA +
Preference number: 4 (lower is better)
Translates to: ERNSSAANPRVVQLQIKMECFMF*GLSIRT
Trigger: TGTCCGAATGGATAAGCCTCAAAACATGAAGCATTC...CATTTTGATCTGTAACTGCACAACCCTGGGGTTTGCTGCAGAGCTATTTCTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR TCA 90 bp CAAACCCCAGGGTTGTGCAGTTACAGATCAAAATGCAATGTACATGACAGATATAATTGTAGAAGTTCCTaGGGCTCCGCTTTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: QTPGLCSYRSKCNVHDRYNCRSS*GSAFFS
Trigger: GGAGAAGAAAGCGGAGCCTCAGGAACTTCTACAATT...ATATCTGTCATGTACATTGCATTTTGATCTGTAACTGCACAACCCTGGGGTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR TCA 90 bp TTGATGTACTTGCCCTCACATCCATTTACCACCAATGCATACATAGTACATGAAGTTCAAGCAAGTCTCTaGGGTAGCAGAGATGTCGGT +
Preference number: 4 (lower is better)
Translates to: LMYLPSHPFTTNAYIVHEVQASL*GSRDVG
Trigger: ACCGACATCTCTGCTACCTCAGAGACTTGCTTGAAC...TTCATGTACTATGTATGCATTGGTGGTAAATGGATGTGAGGGCAAGTACATCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR TCA 90 bp TCTTGGTACCACATAGCTAAAATGGCAGTTGTATTGATAAACATCTCATGGGCAGTTCAAGCAAGTCTCTaGGGTAGCAGAGATGTCGGT +
Preference number: 4 (lower is better)
Translates to: SWYHIAKMAVVLINISWAVQASL*GSRDVG
Trigger: ACCGACATCTCTGCTACCTCAGAGACTTGCTTGAAC...TGCCCATGAGATGTTTATCAATACAACTGCCATTTTAGCTATGTGGTACCAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR TCA 90 bp AATGTACTTGATGTACTTGCCCTCACATCCATTTACCACCAATGCATACATAGTGTTCAAGCAAGTCTCTaGGGTAGCAGAGATGTCGGT +
Preference number: 4 (lower is better)
Translates to: NVLDVLALTSIYHQCIHSVQASL*GSRDVG
Trigger: ACCGACATCTCTGCTACCTCAGAGACTTGCTTGAAC...ACTATGTATGCATTGGTGGTAAATGGATGTGAGGGCAAGTACATCAAGTACATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR TCA 90 bp AATGTACTTGATGTACTTGCCCTCACATCCATTTACCACCAATGCATACATAGTAGAGCCGAGAATAGTTaGCTAACGCAGCCTGTTCCA +
Preference number: 4 (lower is better)
Translates to: NVLDVLALTSIYHQCIHSRAENS*LTQPVP
Trigger: TGGAACAGGCTGCGTTAGTCAACTATTCTCGGCTCT...ACTATGTATGCATTGGTGGTAAATGGATGTGAGGGCAAGTACATCAAGTACATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR TCA 90 bp ATGGGTTTAACTAACAGACTAAGGACATGCACTGATTACAGGACTCTGTCCCAGGCTGAAGAACTTCAATaGCTAGTTCAGCAAGACGTA +
Preference number: 4 (lower is better)
Translates to: MGLTNRLRTCTDYRTLSQAEELQ*LVQQDV
Trigger: TACGTCTTGCTGAACTAGTCATTGAAGTTCTTCAGC...CTGGGACAGAGTCCTGTAATCAGTGCATGTCCTTAGTCTGTTAGTTAAACCCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR TCA 90 bp AATGTACTTGATGTACTTGCCCTCACATCCATTTACCACCAATGCATACATAGTCGCTCAAAGCCCCTGTaGATGGATTGTGCAATTGAG +
Preference number: 4 (lower is better)
Translates to: NVLDVLALTSIYHQCIHSRSKPL*MDCAIE
Trigger: CTCAATTGCACAATCCATTCACAGGGGCTTTGAGCG...ACTATGTATGCATTGGTGGTAAATGGATGTGAGGGCAAGTACATCAAGTACATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR TCA 90 bp TTGATGTACTTGCCCTCACATCCATTTACCACCAATGCATACATAGTACATGAACGCTCAAAGCCCCTGTaGATGGATTGTGCAATTGAG +
Preference number: 4 (lower is better)
Translates to: LMYLPSHPFTTNAYIVHERSKPL*MDCAIE
Trigger: CTCAATTGCACAATCCATTCACAGGGGCTTTGAGCG...TTCATGTACTATGTATGCATTGGTGGTAAATGGATGTGAGGGCAAGTACATCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR TCA 90 bp TTCCATAACTGTAGGCTTTATATAAGGCAAAAGCAAGATGGATCCACTACTTTAATTGACTGGTTCCCATaGCTCCCGCTCAAAGCCCCT +
Preference number: 4 (lower is better)
Translates to: FHNCRLYIRQKQDGSTTLIDWFP*LPLKAP
Trigger: AGGGGCTTTGAGCGGGAGTCATGGGAACCAGTCAAT...TAAAGTAGTGGATCCATCTTGCTTTTGCCTTATATAAAGCCTACAGTTATGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357948.7
ENST00000612439.4
CDS-3UTR TCA 90 bp AATGTACTTGATGTACTTGCCCTCACATCCATTTACCACCAATGCATACATAGTTCCCGAATGAAGGTCTaGAGGGCGTCAAGTTTCCAA +
Preference number: 4 (lower is better)
Translates to: NVLDVLALTSIYHQCIHSSRMKV*RASSFQ
Trigger: TTGGAAACTTGACGCCCTTCAGACCTTCATTCGGGA...ACTATGTATGCATTGGTGGTAAATGGATGTGAGGGCAAGTACATCAAGTACATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
CDS-3UTR TCA 90 bp ATGGGTTTAACTAACAGACTAAGGACATGCACTGATTACAGGACTCTGTCCCAGAAACATGGTGCATATTaGCTGTGGGACTCGAAAATC +
Preference number: 4 (lower is better)
Translates to: MGLTNRLRTCTDYRTLSQKHGAY*LWDSKI
Trigger: GATTTTCGAGTCCCACAGTCAATATGCACCATGTTT...CTGGGACAGAGTCCTGTAATCAGTGCATGTCCTTAGTCTGTTAGTTAAACCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
CDS-3UTR TCA 90 bp ATCGCCCCCTTGCCGTGGCAATTAAGAGAATCAATCCATTGGTATGTAGCCATCCAAAGTTTTGTTGATTaGGCTTTGGCATCAACCATA +
Preference number: 4 (lower is better)
Translates to: IAPLPWQLRESIHWYVAIQSFVD*ALASTI
Trigger: TATGGTTGATGCCAAAGCTCAATCAACAAAACTTTG...GATGGCTACATACCAATGGATTGATTCTCTTAATTGCCACGGCAAGGGGGCGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
CDS-3UTR TCA 90 bp ATGGGTTTAACTAACAGACTAAGGACATGCACTGATTACAGGACTCTGTCCCAGGCTGCAAAGTTTTGTTaGTTGAGCTTTGGCATCAAC +
Preference number: 4 (lower is better)
Translates to: MGLTNRLRTCTDYRTLSQAAKFC*LSFGIN
Trigger: GTTGATGCCAAAGCTCAATCAACAAAACTTTGCAGC...CTGGGACAGAGTCCTGTAATCAGTGCATGTCCTTAGTCTGTTAGTTAAACCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
CDS-3UTR TCA 90 bp GAAAGAAATAGCTCTGCAGCAAACCCCAGGGTTGTGCAGTTACAGATCAAAATGGCTGCAAAGTTTTGTTaGTTGAGCTTTGGCATCAAC +
Preference number: 4 (lower is better)
Translates to: ERNSSAANPRVVQLQIKMAAKFC*LSFGIN
Trigger: GTTGATGCCAAAGCTCAATCAACAAAACTTTGCAGC...CATTTTGATCTGTAACTGCACAACCCTGGGGTTTGCTGCAGAGCTATTTCTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
CDS-3UTR TCA 90 bp TTCCATAACTGTAGGCTTTATATAAGGCAAAAGCAAGATGGATCCACTACTTTATCACGCAGGACATCCTaGGAATGGCGGACGAAAGTC +
Preference number: 4 (lower is better)
Translates to: FHNCRLYIRQKQDGSTTLSRRTS*EWRTKV
Trigger: GACTTTCGTCCGCCATTCTCAGGATGTCCTGCGTGA...TAAAGTAGTGGATCCATCTTGCTTTTGCCTTATATAAAGCCTACAGTTATGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
CDS-3UTR TCA 90 bp TTCCATAACTGTAGGCTTTATATAAGGCAAAAGCAAGATGGATCCACTACTTTATGGCTTCCTCCACAGTaGGACGGTTCCGGATCGTTT +
Preference number: 4 (lower is better)
Translates to: FHNCRLYIRQKQDGSTTLWLPPQ*DGSGSF
Trigger: AAACGATCCGGAACCGTCTCACTGTGGAGGAAGCCA...TAAAGTAGTGGATCCATCTTGCTTTTGCCTTATATAAAGCCTACAGTTATGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
CDS-3UTR TCA 90 bp TTGATGTACTTGCCCTCACATCCATTTACCACCAATGCATACATAGTACATGAATATAGCAGCCATCCATaGCGGTGCCGAAAAAGTAGG +
Preference number: 4 (lower is better)
Translates to: LMYLPSHPFTTNAYIVHEYSSHP*RCRKSR
Trigger: CCTACTTTTTCGGCACCGTCATGGATGGCTGCTATA...TTCATGTACTATGTATGCATTGGTGGTAAATGGATGTGAGGGCAAGTACATCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000383710.9
ENST00000473635.5
CDS-3UTR TCA 90 bp CTGTACTTGCAAATGCTTTCTAGCCAAATTCAAGGGCCATTTTCAAGAGCCATCAATGTTCTCTTCCCCTaGAGCTTTCATTGGTATCCC +
Preference number: 4 (lower is better)
Translates to: LYLQMLSSQIQGPFSRAINVLFP*SFHWYP
Trigger: GGGATACCAATGAAAGCTTCAGGGGAAGAGAACATT...GATGGCTCTTGAAAATGGCCCTTGAATTTGGCTAGAAAGCATTTGCAAGTACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490353.2
CDS-3UTR GCA 90 bp TTCCATAACTGTAGGCTTTATATAAGGCAAAAGCAAGATGGATCCACTACTTTATCCTCCTCCTCTTTCTaGAGCCGCTCCAACTCTTCC +
Preference number: 4 (lower is better)
Translates to: FHNCRLYIRQKQDGSTTLSSSSF*SRSNSS
Trigger: GGAAGAGTTGGAGCGGCTGCAGAAAGAGGAGGAGGA...TAAAGTAGTGGATCCATCTTGCTTTTGCCTTATATAAAGCCTACAGTTATGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR GCA 90 bp CAGGGAAATACACAGACTATAGTGAAATTATTCAGTAAACAGAGATTGGGTACTTCCTCCTCCTCTTTCTaGAGCCGCTCCAACTCTTCC +
Preference number: 4 (lower is better)
Translates to: QGNTQTIVKLFSKQRLGTSSSSF*SRSNSS
Trigger: GGAAGAGTTGGAGCGGCTGCAGAAAGAGGAGGAGGA...AGTACCCAATCTCTGTTTACTGAATAATTTCACTATAGTCTGTGTATTTCCCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490353.2
CDS-3UTR GCA 90 bp TCTTGGTACCACATAGCTAAAATGGCAGTTGTATTGATAAACATCTCATGGGCAACGAACACATACAGCTaGAGCCTCTTCTTCCTCTCC +
Preference number: 4 (lower is better)
Translates to: SWYHIAKMAVVLINISWATNTYS*SLFFLS
Trigger: GGAGAGGAAGAAGAGGCTGCAGCTGTATGTGTTCGT...TGCCCATGAGATGTTTATCAATACAACTGCCATTTTAGCTATGTGGTACCAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR GCA 90 bp TTCCATAACTGTAGGCTTTATATAAGGCAAAAGCAAGATGGATCCACTACTTTATGTTTGCTGATCTTCTaGTGCCGGCGAGCCATGTCG +
Preference number: 4 (lower is better)
Translates to: FHNCRLYIRQKQDGSTTLCLLIF*CRRAMS
Trigger: CGACATGGCTCGCCGGCAGCAGAAGATCAGCAAACA...TAAAGTAGTGGATCCATCTTGCTTTTGCCTTATATAAAGCCTACAGTTATGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR GCA 90 bp CAGGGAAATACACAGACTATAGTGAAATTATTCAGTAAACAGAGATTGGGTACTTGTTTGCTGATCTTCTaGTGCCGGCGAGCCATGTCG +
Preference number: 4 (lower is better)
Translates to: QGNTQTIVKLFSKQRLGTCLLIF*CRRAMS
Trigger: CGACATGGCTCGCCGGCAGCAGAAGATCAGCAAACA...AGTACCCAATCTCTGTTTACTGAATAATTTCACTATAGTCTGTGTATTTCCCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490353.2
CDS-3UTR GCA 90 bp CAAACCCCAGGGTTGTGCAGTTACAGATCAAAATGCAATGTACATGACAGATATTTGACTGTCTGCAGCTaGTGTTTGCTGATCTTCTGC +
Preference number: 4 (lower is better)
Translates to: QTPGLCSYRSKCNVHDRYLTVCS*CLLIFC
Trigger: GCAGAAGATCAGCAAACAGCAGCTGCAGACAGTCAA...ATATCTGTCATGTACATTGCATTTTGATCTGTAACTGCACAACCCTGGGGTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR GCA 90 bp TCTTGGTACCACATAGCTAAAATGGCAGTTGTATTGATAAACATCTCATGGGCACAATCTCAGGCAGGCTaGGCACTCTCTTCTCAATGT +
Preference number: 4 (lower is better)
Translates to: SWYHIAKMAVVLINISWAQSQAG*ALSSQC
Trigger: ACATTGAGAAGAGAGTGCGCAGCCTGCCTGAGATTG...TGCCCATGAGATGTTTATCAATACAACTGCCATTTTAGCTATGTGGTACCAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR GCA 90 bp TCTTGGTACCACATAGCTAAAATGGCAGTTGTATTGATAAACATCTCATGGGCACATAGAGTTGCTCCTTaGTCAGAATCAGCTCGGAGG +
Preference number: 4 (lower is better)
Translates to: SWYHIAKMAVVLINISWAHRVAP*SESARR
Trigger: CCTCCGAGCTGATTCTGAGCAAGGAGCAACTCTATG...TGCCCATGAGATGTTTATCAATACAACTGCCATTTTAGCTATGTGGTACCAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR GCA 90 bp ATGGGTTTAACTAACAGACTAAGGACATGCACTGATTACAGGACTCTGTCCCAGCAAACTTGGGAAATTTaGGTTCCCTGGCTATTTGGT +
Preference number: 4 (lower is better)
Translates to: MGLTNRLRTCTDYRTLSQQTWEI*VPWLFG
Trigger: ACCAAATAGCCAGGGAACGCAAATTTCCCAAGTTTG...CTGGGACAGAGTCCTGTAATCAGTGCATGTCCTTAGTCTGTTAGTTAAACCCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR GCA 90 bp GTCATAAAAGTTTTTCACACACACACACACACACACACACGCACACACATGCACCTTCCACCTCCATTGTaGAATATACGATGCGATTTG +
Preference number: 4 (lower is better)
Translates to: VIKVFHTHTHTHTRTHMHLPPPL*NIRCDL
Trigger: CAAATCGCATCGTATATTGCACAATGGAGGTGGAAG...GTGCATGTGTGTGCGTGTGTGTGTGTGTGTGTGTGTGTGAAAAACTTTTATGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000490353.2
CDS-3UTR GCA 90 bp AATGTACTTGATGTACTTGCCCTCACATCCATTTACCACCAATGCATACATAGTCATGGCGCCATTTTCTaGCCGTTCAAGCAAGTCTCT +
Preference number: 4 (lower is better)
Translates to: NVLDVLALTSIYHQCIHSHGAIF*PFKQVS
Trigger: AGAGACTTGCTTGAACGGGCAGAAAATGGCGCCATG...ACTATGTATGCATTGGTGGTAAATGGATGTGAGGGCAAGTACATCAAGTACATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR GCA 90 bp TTGATGTACTTGCCCTCACATCCATTTACCACCAATGCATACATAGTACATGAACATGGCGCCATTTTCTaGCCGTTCAAGCAAGTCTCT +
Preference number: 4 (lower is better)
Translates to: LMYLPSHPFTTNAYIVHEHGAIF*PFKQVS
Trigger: AGAGACTTGCTTGAACGGGCAGAAAATGGCGCCATG...TTCATGTACTATGTATGCATTGGTGGTAAATGGATGTGAGGGCAAGTACATCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR GCA 90 bp ATTGCTTGTAAACATATAGACATGGACATCAGGAAATCAGTGGATATGAAGGTCTCTTCTTCAGGCCAGTaGAGGTCCCGAATGAAGGTC +
Preference number: 4 (lower is better)
Translates to: IACKHIDMDIRKSVDMKVSSSGQ*RSRMKV
Trigger: GACCTTCATTCGGGACCTGCACTGGCCTGAAGAAGA...GACCTTCATATCCACTGATTTCCTGATGTCCATGTCTATATGTTTACAAGCAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
CDS-3UTR GCA 90 bp GAAAGAAATAGCTCTGCAGCAAACCCCAGGGTTGTGCAGTTACAGATCAAAATGGGCCCATTTCCATGCTaGAAAGTTTTGTTGATTGAG +
Preference number: 4 (lower is better)
Translates to: ERNSSAANPRVVQLQIKMGPFPC*KVLLIE
Trigger: CTCAATCAACAAAACTTTGCAGCATGGAAATGGGCC...CATTTTGATCTGTAACTGCACAACCCTGGGGTTTGCTGCAGAGCTATTTCTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
CDS-3UTR GCA 90 bp GAAAGAAATAGCTCTGCAGCAAACCCCAGGGTTGTGCAGTTACAGATCAAAATGTCGTTTCATAGGTCTTaGTGTTTAAGGTGGAGTCCA +
Preference number: 4 (lower is better)
Translates to: ERNSSAANPRVVQLQIKMSFHRS*CLRWSP
Trigger: TGGACTCCACCTTAAACAGCAAGACCTATGAAACGA...CATTTTGATCTGTAACTGCACAACCCTGGGGTTTGCTGCAGAGCTATTTCTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
CDS-3UTR GCA 90 bp ATGGGTTTAACTAACAGACTAAGGACATGCACTGATTACAGGACTCTGTCCCAGTCGTTTCATAGGTCTTaGTGTTTAAGGTGGAGTCCA +
Preference number: 4 (lower is better)
Translates to: MGLTNRLRTCTDYRTLSQSFHRS*CLRWSP
Trigger: TGGACTCCACCTTAAACAGCAAGACCTATGAAACGA...CTGGGACAGAGTCCTGTAATCAGTGCATGTCCTTAGTCTGTTAGTTAAACCCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
CDS-3UTR GCA 90 bp TTCCATAACTGTAGGCTTTATATAAGGCAAAAGCAAGATGGATCCACTACTTTATTCATGCTGATGCCCTaGAGTCCCCCACCTTCACTC +
Preference number: 4 (lower is better)
Translates to: FHNCRLYIRQKQDGSTTLFMLMP*SPPPSL
Trigger: GAGTGAAGGTGGGGGACTGCAGGGCATCAGCATGAA...TAAAGTAGTGGATCCATCTTGCTTTTGCCTTATATAAAGCCTACAGTTATGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
CDS-3UTR GCA 90 bp TTCCATAACTGTAGGCTTTATATAAGGCAAAAGCAAGATGGATCCACTACTTTAGTTGCAAGCTGTCGATaGAGCCAAGAGCCGAAGAGG +
Preference number: 4 (lower is better)
Translates to: FHNCRLYIRQKQDGSTTLVASCR*SQEPKR
Trigger: CCTCTTCGGCTCTTGGCTGCATCGACAGCTTGCAAC...TAAAGTAGTGGATCCATCTTGCTTTTGCCTTATATAAAGCCTACAGTTATGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383710.9
CDS-3UTR GCA 90 bp CAAACCCCAGGGTTGTGCAGTTACAGATCAAAATGCAATGTACATGACAGATATATCAACATGTGGCTCTaGGTGGTGCTCCTCATTTTG +
Preference number: 4 (lower is better)
Translates to: QTPGLCSYRSKCNVHDRYINMWL*VVLLIL
Trigger: CAAAATGAGGAGCACCACGCAGAGCCACATGTTGAT...ATATCTGTCATGTACATTGCATTTTGATCTGTAACTGCACAACCCTGGGGTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000383710.9
CDS-3UTR CCA 90 bp CAAACCCCAGGGTTGTGCAGTTACAGATCAAAATGCAATGTACATGACAGATATAGATGGCATCAAATTTaGCCATCCAGGAGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: QTPGLCSYRSKCNVHDRYRWHQI*PSRSSA
Trigger: TGCTGAGCTCCTGGATGGCCAAATTTGATGCCATCT...ATATCTGTCATGTACATTGCATTTTGATCTGTAACTGCACAACCCTGGGGTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CCA 90 bp ATTGCTTGTAAACATATAGACATGGACATCAGGAAATCAGTGGATATGAAGGTCAGCTCTCGTCTGATCTaGGCTGCTTGCTCATCTGGA +
Preference number: 4 (lower is better)
Translates to: IACKHIDMDIRKSVDMKVSSRLI*AACSSG
Trigger: TCCAGATGAGCAAGCAGCCCAGATCAGACGAGAGCT...GACCTTCATATCCACTGATTTCCTGATGTCCATGTCTATATGTTTACAAGCAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CCA 90 bp GAAAGAAATAGCTCTGCAGCAAACCCCAGGGTTGTGCAGTTACAGATCAAAATGGAAATTTGCGTTCCCTaGCTATTTGGTCTGCCATTT +
Preference number: 4 (lower is better)
Translates to: ERNSSAANPRVVQLQIKMEICVP*LFGLPF
Trigger: AAATGGCAGACCAAATAGCCAGGGAACGCAAATTTC...CATTTTGATCTGTAACTGCACAACCCTGGGGTTTGCTGCAGAGCTATTTCTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CCA 90 bp ATGGGTTTAACTAACAGACTAAGGACATGCACTGATTACAGGACTCTGTCCCAGCTTTGGATACAAACTTaGGAAATTTGCGTTCCCTGG +
Preference number: 4 (lower is better)
Translates to: MGLTNRLRTCTDYRTLSQLWIQT*EICVPW
Trigger: CCAGGGAACGCAAATTTCCCAAGTTTGTATCCAAAG...CTGGGACAGAGTCCTGTAATCAGTGCATGTCCTTAGTCTGTTAGTTAAACCCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CCA 90 bp GAAAGAAATAGCTCTGCAGCAAACCCCAGGGTTGTGCAGTTACAGATCAAAATGCTTTGGATACAAACTTaGGAAATTTGCGTTCCCTGG +
Preference number: 4 (lower is better)
Translates to: ERNSSAANPRVVQLQIKMLWIQT*EICVPW
Trigger: CCAGGGAACGCAAATTTCCCAAGTTTGTATCCAAAG...CATTTTGATCTGTAACTGCACAACCCTGGGGTTTGCTGCAGAGCTATTTCTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CCA 90 bp CTGTACTTGCAAATGCTTTCTAGCCAAATTCAAGGGCCATTTTCAAGAGCCATCATGATGGAAGCATTGTaGCTGCGTTTGAGTTTCTGG +
Preference number: 4 (lower is better)
Translates to: LYLQMLSSQIQGPFSRAIMMEAL*LRLSFW
Trigger: CCAGAAACTCAAACGCAGCCACAATGCTTCCATCAT...GATGGCTCTTGAAAATGGCCCTTGAATTTGGCTAGAAAGCATTTGCAAGTACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490353.2
CDS-3UTR CCA 90 bp TCTTGGTACCACATAGCTAAAATGGCAGTTGTATTGATAAACATCTCATGGGCAGCACGACATCTGACTTaGAGAGCTGGTTCTCACTCT +
Preference number: 4 (lower is better)
Translates to: SWYHIAKMAVVLINISWAARHLT*RAGSHS
Trigger: AGAGTGAGAACCAGCTCTCCAAGTCAGATGTCGTGC...TGCCCATGAGATGTTTATCAATACAACTGCCATTTTAGCTATGTGGTACCAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CCA 90 bp GATACCACTTCGTTTTGCTGGAATGCCCTTGCCACCCTTTCTGTACTTGCAAATAAAGATTTGAGGCCTTaGACTTCCATAATTACCACC +
Preference number: 4 (lower is better)
Translates to: DTTSFCWNALATLSVLANKDLRP*TSIITT
Trigger: GGTGGTAATTATGGAAGTCCAAGGCCTCAAATCTTT...ATTTGCAAGTACAGAAAGGGTGGCAAGGGCATTCCAGCAAAACGAAGTGGTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490353.2
CDS-3UTR CCA 90 bp ATGGGTTTAACTAACAGACTAAGGACATGCACTGATTACAGGACTCTGTCCCAGATATACGATGCGATTTaGAGCCAAAGATTTGAGGCC +
Preference number: 4 (lower is better)
Translates to: MGLTNRLRTCTDYRTLSQIYDAI*SQRFEA
Trigger: GGCCTCAAATCTTTGGCTCCAAATCGCATCGTATAT...CTGGGACAGAGTCCTGTAATCAGTGCATGTCCTTAGTCTGTTAGTTAAACCCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CCA 90 bp TTCCATAACTGTAGGCTTTATATAAGGCAAAAGCAAGATGGATCCACTACTTTAGTGGAGAAGTCACCCTaGGTGCCCCAGGTTGGTTTA +
Preference number: 4 (lower is better)
Translates to: FHNCRLYIRQKQDGSTTLVEKSP*VPQVGL
Trigger: TAAACCAACCTGGGGCACCCAGGGTGACTTCTCCAC...TAAAGTAGTGGATCCATCTTGCTTTTGCCTTATATAAAGCCTACAGTTATGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CCA 90 bp ATTGCTTGTAAACATATAGACATGGACATCAGGAAATCAGTGGATATGAAGGTCTCTAGTACAAACACCTaGCCAGGACTGAACCAGCCC +
Preference number: 4 (lower is better)
Translates to: IACKHIDMDIRKSVDMKVSSTNT*PGLNQP
Trigger: GGGCTGGTTCAGTCCTGGCCAGGTGTTTGTACTAGA...GACCTTCATATCCACTGATTTCCTGATGTCCATGTCTATATGTTTACAAGCAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CCA 90 bp ATTGCTTGTAAACATATAGACATGGACATCAGGAAATCAGTGGATATGAAGGTCTGTAGTGAAGAAGGGTaGGGTCGATCATGGCGCCAT +
Preference number: 4 (lower is better)
Translates to: IACKHIDMDIRKSVDMKVCSEEG*GRSWRH
Trigger: ATGGCGCCATGATCGACCCCACCCTTCTTCACTACA...GACCTTCATATCCACTGATTTCCTGATGTCCATGTCTATATGTTTACAAGCAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CCA 90 bp TCTTGGTACCACATAGCTAAAATGGCAGTTGTATTGATAAACATCTCATGGGCACTGTTCCCATGGACATaGGATGCACAGAAGGCAAAG +
Preference number: 4 (lower is better)
Translates to: SWYHIAKMAVVLINISWALFPWT*DAQKAK
Trigger: CTTTGCCTTCTGTGCATCCCATGTCCATGGGAACAG...TGCCCATGAGATGTTTATCAATACAACTGCCATTTTAGCTATGTGGTACCAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CCA 90 bp ATGGGTTTAACTAACAGACTAAGGACATGCACTGATTACAGGACTCTGTCCCAGCTCCTCTTGTGGCACTaGGGTAACAATATCTTTCAT +
Preference number: 4 (lower is better)
Translates to: MGLTNRLRTCTDYRTLSQLLLWH*GNNIFH
Trigger: ATGAAAGATATTGTTACCCCAGTGCCACAAGAGGAG...CTGGGACAGAGTCCTGTAATCAGTGCATGTCCTTAGTCTGTTAGTTAAACCCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CCA 90 bp ATGGGTTTAACTAACAGACTAAGGACATGCACTGATTACAGGACTCTGTCCCAGTTTTACCTCCTCTTGTaGCACTGGGGTAACAATATC +
Preference number: 4 (lower is better)
Translates to: MGLTNRLRTCTDYRTLSQFYLLL*HWGNNI
Trigger: GATATTGTTACCCCAGTGCCACAAGAGGAGGTAAAA...CTGGGACAGAGTCCTGTAATCAGTGCATGTCCTTAGTCTGTTAGTTAAACCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CCA 90 bp ATGGGTTTAACTAACAGACTAAGGACATGCACTGATTACAGGACTCTGTCCCAGATATCTAACAACAAGTaGGGCAAACAGGTCTTGCAG +
Preference number: 4 (lower is better)
Translates to: MGLTNRLRTCTDYRTLSQISNNK*GKQVLQ
Trigger: CTGCAAGACCTGTTTGCCCCACTTGTTGTTAGATAT...CTGGGACAGAGTCCTGTAATCAGTGCATGTCCTTAGTCTGTTAGTTAAACCCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CCA 90 bp GAAAGAAATAGCTCTGCAGCAAACCCCAGGGTTGTGCAGTTACAGATCAAAATGTCCCTTCGTCATATCTaGATAATTTTGCCAGCACTC +
Preference number: 4 (lower is better)
Translates to: ERNSSAANPRVVQLQIKMSLRHI*IILPAL
Trigger: GAGTGCTGGCAAAATTATCCAGATATGACGAAGGGA...CATTTTGATCTGTAACTGCACAACCCTGGGGTTTGCTGCAGAGCTATTTCTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
CDS-3UTR CCA 90 bp TTGATGTACTTGCCCTCACATCCATTTACCACCAATGCATACATAGTACATGAATCTTGCTGTTTAAGGTaGAGTCCAGGACCCCTTGCA +
Preference number: 4 (lower is better)
Translates to: LMYLPSHPFTTNAYIVHESCCLR*SPGPLA
Trigger: TGCAAGGGGTCCTGGACTCCACCTTAAACAGCAAGA...TTCATGTACTATGTATGCATTGGTGGTAAATGGATGTGAGGGCAAGTACATCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
CDS-3UTR CCA 90 bp AATGTACTTGATGTACTTGCCCTCACATCCATTTACCACCAATGCATACATAGTTCTTGCTGTTTAAGGTaGAGTCCAGGACCCCTTGCA +
Preference number: 4 (lower is better)
Translates to: NVLDVLALTSIYHQCIHSSCCLR*SPGPLA
Trigger: TGCAAGGGGTCCTGGACTCCACCTTAAACAGCAAGA...ACTATGTATGCATTGGTGGTAAATGGATGTGAGGGCAAGTACATCAAGTACATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
CDS-3UTR CCA 90 bp ATGGGTTTAACTAACAGACTAAGGACATGCACTGATTACAGGACTCTGTCCCAGGACTCTAGGACCAAATaGTCTAATCGTCTTCTTCGT +
Preference number: 4 (lower is better)
Translates to: MGLTNRLRTCTDYRTLSQDSRTK*SNRLLR
Trigger: ACGAAGAAGACGATTAGACCATTTGGTCCTAGAGTC...CTGGGACAGAGTCCTGTAATCAGTGCATGTCCTTAGTCTGTTAGTTAAACCCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
CDS-3UTR CCA 90 bp GAAAGAAATAGCTCTGCAGCAAACCCCAGGGTTGTGCAGTTACAGATCAAAATGGACTCTAGGACCAAATaGTCTAATCGTCTTCTTCGT +
Preference number: 4 (lower is better)
Translates to: ERNSSAANPRVVQLQIKMDSRTK*SNRLLR
Trigger: ACGAAGAAGACGATTAGACCATTTGGTCCTAGAGTC...CATTTTGATCTGTAACTGCACAACCCTGGGGTTTGCTGCAGAGCTATTTCTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
CDS-3UTR CCA 90 bp ATGGGTTTAACTAACAGACTAAGGACATGCACTGATTACAGGACTCTGTCCCAGCATTTTCTTCGATTTTaGCATACTCTGAGAGCCGAG +
Preference number: 4 (lower is better)
Translates to: MGLTNRLRTCTDYRTLSQHFLRF*HTLRAE
Trigger: CTCGGCTCTCAGAGTATGCCAAAATCGAAGAAAATG...CTGGGACAGAGTCCTGTAATCAGTGCATGTCCTTAGTCTGTTAGTTAAACCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357948.7
ENST00000612439.4
CDS-3UTR CCA 90 bp CAAACCCCAGGGTTGTGCAGTTACAGATCAAAATGCAATGTACATGACAGATATATCGCCCCCTTGCCGTaGCAATTAAGAGAATCAATC +
Preference number: 4 (lower is better)
Translates to: QTPGLCSYRSKCNVHDRYIAPLP*QLRESI
Trigger: GATTGATTCTCTTAATTGCCACGGCAAGGGGGCGAT...ATATCTGTCATGTACATTGCATTTTGATCTGTAACTGCACAACCCTGGGGTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
CDS-3UTR CCA 90 bp TCTTGGTACCACATAGCTAAAATGGCAGTTGTATTGATAAACATCTCATGGGCATCCTTTATCAACATGTaGCTCTGCGTGGTGCTCCTC +
Preference number: 4 (lower is better)
Translates to: SWYHIAKMAVVLINISWASFINM*LCVVLL
Trigger: GAGGAGCACCACGCAGAGCCACATGTTGATAAAGGA...TGCCCATGAGATGTTTATCAATACAACTGCCATTTTAGCTATGTGGTACCAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383710.9
CDS-3UTR CCA 90 bp ATGGGTTTAACTAACAGACTAAGGACATGCACTGATTACAGGACTCTGTCCCAGTGGGTAGGTTCACATTaGGTAGGTTACTGGTTAAAC +
Preference number: 4 (lower is better)
Translates to: MGLTNRLRTCTDYRTLSQWVGSH*VGYWLN
Trigger: GTTTAACCAGTAACCTACCCAATGTGAACCTACCCA...CTGGGACAGAGTCCTGTAATCAGTGCATGTCCTTAGTCTGTTAGTTAAACCCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383710.9
CDS-3UTR CCA 90 bp TTCCATAACTGTAGGCTTTATATAAGGCAAAAGCAAGATGGATCCACTACTTTAAGCTTCTGGTTCAGGTaGGGAGGGAGTTTTGCTCCC +
Preference number: 4 (lower is better)
Translates to: FHNCRLYIRQKQDGSTTLSFWFR*GGSFAP
Trigger: GGGAGCAAAACTCCCTCCCCACCTGAACCAGAAGCT...TAAAGTAGTGGATCCATCTTGCTTTTGCCTTATATAAAGCCTACAGTTATGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612439.4
3UTR CAA 72 bp ACATGGAAAGAAATAGCTCTGCAGCAAACCCCAGGGTaGTGCAGTTACAGATCAAAATGCAATGTACATGAC +
Preference number: 4 (lower is better)
Translates to: TWKEIALQQTPG*CSYRSKCNVHD
Trigger: GTCATGTACATTGCATTTTGATCTGTAACTGCACAACCCTGGGGTTTGCTGCAGAGCTATTTCTTTCCATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
CDS-3UTR TCA 90 bp TGTCTTGAGTGTTCACATTCAACAACATTACTAATTCCATCTTTCTCATTCACGAGACAGCACGACATCTaGCTTGGAGAGCTGGTTCTC +
Preference number: 4 (lower is better)
Translates to: CLECSHSTTLLIPSFSFTRQHDI*LGELVL
Trigger: GAGAACCAGCTCTCCAAGTCAGATGTCGTGCTGTCT...CGTGAATGAGAAAGATGGAATTAGTAATGTTGTTGAATGTGAACACTCAAGACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490353.2
CDS-3UTR TCA 90 bp CAAACCCCAGGGTTGTGCAGTTACAGATCAAAATGCAATGTACATGACAGATATAATTACCACCTCCAATaGGAAAGACAGCACGACATC +
Preference number: 4 (lower is better)
Translates to: QTPGLCSYRSKCNVHDRYNYHLQ*ERQHDI
Trigger: GATGTCGTGCTGTCTTTCTCATTGGAGGTGGTAATT...ATATCTGTCATGTACATTGCATTTTGATCTGTAACTGCACAACCCTGGGGTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR TCA 90 bp AATGTACTTGATGTACTTGCCCTCACATCCATTTACCACCAATGCATACATAGTTTAGAAGCCTCGGCCTaGTCAGTCTGTAGTTTCTCT +
Preference number: 4 (lower is better)
Translates to: NVLDVLALTSIYHQCIHSLEASA*SVCSFS
Trigger: AGAGAAACTACAGACTGATCAGGCCGAGGCTTCTAA...ACTATGTATGCATTGGTGGTAAATGGATGTGAGGGCAAGTACATCAAGTACATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR TCA 90 bp TCAACAACATTACTAATTCCATCTTTCTCATTCACGTCACTTTGCAAGCTGGCATTAGAAGCCTCGGCCTaGTCAGTCTGTAGTTTCTCT +
Preference number: 4 (lower is better)
Translates to: STTLLIPSFSFTSLCKLALEASA*SVCSFS
Trigger: AGAGAAACTACAGACTGATCAGGCCGAGGCTTCTAA...TGCCAGCTTGCAAAGTGACGTGAATGAGAAAGATGGAATTAGTAATGTTGTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490353.2
CDS-3UTR TCA 90 bp TTGATGTACTTGCCCTCACATCCATTTACCACCAATGCATACATAGTACATGAAATGGCAAACGTGTACTaGCTGACCTGCACCAATACA +
Preference number: 4 (lower is better)
Translates to: LMYLPSHPFTTNAYIVHEMANVY*LTCTNT
Trigger: TGTATTGGTGCAGGTCAGTCAGTACACGTTTGCCAT...TTCATGTACTATGTATGCATTGGTGGTAAATGGATGTGAGGGCAAGTACATCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR TCA 90 bp TCTTGGTACCACATAGCTAAAATGGCAGTTGTATTGATAAACATCTCATGGGCAAATTGTAGAAGTTCCTaGGGCTCCGCTTTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: SWYHIAKMAVVLINISWANCRSS*GSAFFS
Trigger: GGAGAAGAAAGCGGAGCCTCAGGAACTTCTACAATT...TGCCCATGAGATGTTTATCAATACAACTGCCATTTTAGCTATGTGGTACCAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR TCA 90 bp CAAACCCCAGGGTTGTGCAGTTACAGATCAAAATGCAATGTACATGACAGATATGATTTTGGCATACTCTaGGAGCCGAGAATAGTTGAC +
Preference number: 4 (lower is better)
Translates to: QTPGLCSYRSKCNVHDRYDFGIL*EPRIVD
Trigger: GTCAACTATTCTCGGCTCTCAGAGTATGCCAAAATC...ATATCTGTCATGTACATTGCATTTTGATCTGTAACTGCACAACCCTGGGGTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR TCA 90 bp CAAACCCCAGGGTTGTGCAGTTACAGATCAAAATGCAATGTACATGACAGATATGCTTTTTGGCAGGAGTaGTTAACCGGCCTACATTTT +
Preference number: 4 (lower is better)
Translates to: QTPGLCSYRSKCNVHDRYAFWQE*LTGLHF
Trigger: AAAATGTAGGCCGGTTAATCACTCCTGCCAAAAAGC...ATATCTGTCATGTACATTGCATTTTGATCTGTAACTGCACAACCCTGGGGTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR TCA 90 bp ATGGGTTTAACTAACAGACTAAGGACATGCACTGATTACAGGACTCTGTCCCAGTGCTCCTCATTTTGCTaGAGAACTTCAATGACTAGT +
Preference number: 4 (lower is better)
Translates to: MGLTNRLRTCTDYRTLSQCSSFC*RTSMTS
Trigger: ACTAGTCATTGAAGTTCTTCAGCAAAATGAGGAGCA...CTGGGACAGAGTCCTGTAATCAGTGCATGTCCTTAGTCTGTTAGTTAAACCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR TCA 90 bp TTCCATAACTGTAGGCTTTATATAAGGCAAAAGCAAGATGGATCCACTACTTTAGTCTACTGCAAAGAGTaGCAGGAACGTCTCCGCATG +
Preference number: 4 (lower is better)
Translates to: FHNCRLYIRQKQDGSTTLVYCKE*QERLRM
Trigger: CATGCGGAGACGTTCCTGTCACTCTTTGCAGTAGAC...TAAAGTAGTGGATCCATCTTGCTTTTGCCTTATATAAAGCCTACAGTTATGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR TCA 90 bp ATTGCTTGTAAACATATAGACATGGACATCAGGAAATCAGTGGATATGAAGGTCCGCTCAAAGCCCCTGTaGATGGATTGTGCAATTGAG +
Preference number: 4 (lower is better)
Translates to: IACKHIDMDIRKSVDMKVRSKPL*MDCAIE
Trigger: CTCAATTGCACAATCCATTCACAGGGGCTTTGAGCG...GACCTTCATATCCACTGATTTCCTGATGTCCATGTCTATATGTTTACAAGCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR TCA 90 bp ATGGGTTTAACTAACAGACTAAGGACATGCACTGATTACAGGACTCTGTCCCAGCAATCCTGGTTCTTTTaGCACAAGATTCGATCATGT +
Preference number: 4 (lower is better)
Translates to: MGLTNRLRTCTDYRTLSQQSWFF*HKIRSC
Trigger: ACATGATCGAATCTTGTGTCAAAAGAACCAGGATTG...CTGGGACAGAGTCCTGTAATCAGTGCATGTCCTTAGTCTGTTAGTTAAACCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
CDS-3UTR TCA 90 bp GAAAGAAATAGCTCTGCAGCAAACCCCAGGGTTGTGCAGTTACAGATCAAAATGCAATCCTGGTTCTTTTaGCACAAGATTCGATCATGT +
Preference number: 4 (lower is better)
Translates to: ERNSSAANPRVVQLQIKMQSWFF*HKIRSC
Trigger: ACATGATCGAATCTTGTGTCAAAAGAACCAGGATTG...CATTTTGATCTGTAACTGCACAACCCTGGGGTTTGCTGCAGAGCTATTTCTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
CDS-3UTR TCA 90 bp CAAACCCCAGGGTTGTGCAGTTACAGATCAAAATGCAATGTACATGACAGATATTGTACATCTCCTCATTaGCCTTATCACGCAGGACAT +
Preference number: 4 (lower is better)
Translates to: QTPGLCSYRSKCNVHDRYCTSPH*PYHAGH
Trigger: ATGTCCTGCGTGATAAGGTCAATGAGGAGATGTACA...ATATCTGTCATGTACATTGCATTTTGATCTGTAACTGCACAACCCTGGGGTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
CDS-3UTR TCA 90 bp TCTTGGTACCACATAGCTAAAATGGCAGTTGTATTGATAAACATCTCATGGGCAACTAAGGACATGCACTaGTTACAGGACTCTGTCCCA +
Preference number: 4 (lower is better)
Translates to: SWYHIAKMAVVLINISWATKDMH*LQDSVP
Trigger: TGGGACAGAGTCCTGTAATCAGTGCATGTCCTTAGT...TGCCCATGAGATGTTTATCAATACAACTGCCATTTTAGCTATGTGGTACCAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
CDS-3UTR TCA 90 bp TCAACAACATTACTAATTCCATCTTTCTCATTCACGTCACTTTGCAAGCTGGCACATCAAATGGCACTGTaGGGCAGTTGTTCTCTTCTG +
Preference number: 4 (lower is better)
Translates to: STTLLIPSFSFTSLCKLAHQMAL*GSCSLL
Trigger: CAGAAGAGAACAACTGCCTCACAGTGCCATTTGATG...TGCCAGCTTGCAAAGTGACGTGAATGAGAAAGATGGAATTAGTAATGTTGTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490353.2
CDS-3UTR TCA 90 bp CAGGGAAATACACAGACTATAGTGAAATTATTCAGTAAACAGAGATTGGGTACTCCCCTGGAGATGATTTaGCATGGCACAAAGACGGGA +
Preference number: 4 (lower is better)
Translates to: QGNTQTIVKLFSKQRLGTPLEMI*HGTKTG
Trigger: TCCCGTCTTTGTGCCATGTCAAATCATCTCCAGGGG...AGTACCCAATCTCTGTTTACTGAATAATTTCACTATAGTCTGTGTATTTCCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490353.2
CDS-3UTR TCA 90 bp ACTTCGTTTTGCTGGAATGCCCTTGCCACCCTTTCTGTACTTGCAAATGCTTTCATTAACACGTTCACTTaGCATTTCATTCCGGTCATT +
Preference number: 4 (lower is better)
Translates to: TSFCWNALATLSVLANAFINTFT*HFIPVI
Trigger: AATGACCGGAATGAAATGTCAAGTGAACGTGTTAAT...GAAAGCATTTGCAAGTACAGAAAGGGTGGCAAGGGCATTCCAGCAAAACGAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490353.2
CDS-3UTR GCA 90 bp ATTGCTTGTAAACATATAGACATGGACATCAGGAAATCAGTGGATATGAAGGTCCAATCTCAGGCAGGCTaGGCACTCTCTTCTCAATGT +
Preference number: 4 (lower is better)
Translates to: IACKHIDMDIRKSVDMKVQSQAG*ALSSQC
Trigger: ACATTGAGAAGAGAGTGCGCAGCCTGCCTGAGATTG...GACCTTCATATCCACTGATTTCCTGATGTCCATGTCTATATGTTTACAAGCAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR GCA 90 bp ATTGCTTGTAAACATATAGACATGGACATCAGGAAATCAGTGGATATGAAGGTCCATAGAGTTGCTCCTTaGTCAGAATCAGCTCGGAGG +
Preference number: 4 (lower is better)
Translates to: IACKHIDMDIRKSVDMKVHRVAP*SESARR
Trigger: CCTCCGAGCTGATTCTGAGCAAGGAGCAACTCTATG...GACCTTCATATCCACTGATTTCCTGATGTCCATGTCTATATGTTTACAAGCAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR GCA 90 bp CAAACCCCAGGGTTGTGCAGTTACAGATCAAAATGCAATGTACATGACAGATATTCTTCTCCCGATAACTaGACATGGCAAACGTGTACT +
Preference number: 4 (lower is better)
Translates to: QTPGLCSYRSKCNVHDRYSSPDN*TWQTCT
Trigger: AGTACACGTTTGCCATGTGCAGTTATCGGGAGAAGA...ATATCTGTCATGTACATTGCATTTTGATCTGTAACTGCACAACCCTGGGGTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR GCA 90 bp ATTGCTTGTAAACATATAGACATGGACATCAGGAAATCAGTGGATATGAAGGTCCATGGCGCCATTTTCTaGCCGTTCAAGCAAGTCTCT +
Preference number: 4 (lower is better)
Translates to: IACKHIDMDIRKSVDMKVHGAIF*PFKQVS
Trigger: AGAGACTTGCTTGAACGGGCAGAAAATGGCGCCATG...GACCTTCATATCCACTGATTTCCTGATGTCCATGTCTATATGTTTACAAGCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR GCA 90 bp TTGATGTACTTGCCCTCACATCCATTTACCACCAATGCATACATAGTACATGAAAGGAACGTCTCCGCATaGTCCACCATTAAATCTGAC +
Preference number: 4 (lower is better)
Translates to: LMYLPSHPFTTNAYIVHERNVSA*STIKSD
Trigger: GTCAGATTTAATGGTGGAGCATGCGGAGACGTTCCT...TTCATGTACTATGTATGCATTGGTGGTAAATGGATGTGAGGGCAAGTACATCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR GCA 90 bp ATCGCCCCCTTGCCGTGGCAATTAAGAGAATCAATCCATTGGTATGTAGCCATCGATAGTAACGAACTTTaGAACCAAGAGTGTTATCAT +
Preference number: 4 (lower is better)
Translates to: IAPLPWQLRESIHWYVAIDSNEL*NQECYH
Trigger: ATGATAACACTCTTGGTTGCAAAGTTCGTTACTATC...GATGGCTACATACCAATGGATTGATTCTCTTAATTGCCACGGCAAGGGGGCGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
CDS-3UTR GCA 90 bp GAAAGAAATAGCTCTGCAGCAAACCCCAGGGTTGTGCAGTTACAGATCAAAATGACAGTAGTTTTGAACTaGGCGCTTGATGTTAAGTCA +
Preference number: 4 (lower is better)
Translates to: ERNSSAANPRVVQLQIKMTVVLN*ALDVKS
Trigger: TGACTTAACATCAAGCGCGCAGTTCAAAACTACTGT...CATTTTGATCTGTAACTGCACAACCCTGGGGTTTGCTGCAGAGCTATTTCTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
CDS-3UTR GCA 90 bp TTCCATAACTGTAGGCTTTATATAAGGCAAAAGCAAGATGGATCCACTACTTTACGCCTCCAGAAAAGATaGCGAGTGTTGCAAGCTGTC +
Preference number: 4 (lower is better)
Translates to: FHNCRLYIRQKQDGSTTLRLQKR*RVLQAV
Trigger: GACAGCTTGCAACACTCGGCATCTTTTCTGGAGGCG...TAAAGTAGTGGATCCATCTTGCTTTTGCCTTATATAAAGCCTACAGTTATGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CCA 90 bp TTGATGTACTTGCCCTCACATCCATTTACCACCAATGCATACATAGTACATGAACTTCTCCACGGTAGATaGCATCAAATTTGGCCATCC +
Preference number: 4 (lower is better)
Translates to: LMYLPSHPFTTNAYIVHELLHGR*HQIWPS
Trigger: GGATGGCCAAATTTGATGCCATCTACCGTGGAGAAG...TTCATGTACTATGTATGCATTGGTGGTAAATGGATGTGAGGGCAAGTACATCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CCA 90 bp TTCCATAACTGTAGGCTTTATATAAGGCAAAAGCAAGATGGATCCACTACTTTAAGCTCTCGTCTGATCTaGGCTGCTTGCTCATCTGGA +
Preference number: 4 (lower is better)
Translates to: FHNCRLYIRQKQDGSTTLSSRLI*AACSSG
Trigger: TCCAGATGAGCAAGCAGCCCAGATCAGACGAGAGCT...TAAAGTAGTGGATCCATCTTGCTTTTGCCTTATATAAAGCCTACAGTTATGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CCA 90 bp TGTCTTGAGTGTTCACATTCAACAACATTACTAATTCCATCTTTCTCATTCACGAGCTCTCGTCTGATCTaGGCTGCTTGCTCATCTGGA +
Preference number: 4 (lower is better)
Translates to: CLECSHSTTLLIPSFSFTSSRLI*AACSSG
Trigger: TCCAGATGAGCAAGCAGCCCAGATCAGACGAGAGCT...CGTGAATGAGAAAGATGGAATTAGTAATGTTGTTGAATGTGAACACTCAAGACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490353.2
CDS-3UTR CCA 90 bp TTCCATAACTGTAGGCTTTATATAAGGCAAAAGCAAGATGGATCCACTACTTTACTGCGTTTGAGTTTCTaGAGCTTGAACTCCCCGCCT +
Preference number: 4 (lower is better)
Translates to: FHNCRLYIRQKQDGSTTLLRLSF*SLNSPP
Trigger: AGGCGGGGAGTTCAAGCTCCAGAAACTCAAACGCAG...TAAAGTAGTGGATCCATCTTGCTTTTGCCTTATATAAAGCCTACAGTTATGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CCA 90 bp CAAACCCCAGGGTTGTGCAGTTACAGATCAAAATGCAATGTACATGACAGATATATGATGGAAGCATTGTaGCTGCGTTTGAGTTTCTGG +
Preference number: 4 (lower is better)
Translates to: QTPGLCSYRSKCNVHDRYMMEAL*LRLSFW
Trigger: CCAGAAACTCAAACGCAGCCACAATGCTTCCATCAT...ATATCTGTCATGTACATTGCATTTTGATCTGTAACTGCACAACCCTGGGGTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CCA 90 bp GAAAGAAATAGCTCTGCAGCAAACCCCAGGGTTGTGCAGTTACAGATCAAAATGAAAGATTTGAGGCCTTaGACTTCCATAATTACCACC +
Preference number: 4 (lower is better)
Translates to: ERNSSAANPRVVQLQIKMKDLRP*TSIITT
Trigger: GGTGGTAATTATGGAAGTCCAAGGCCTCAAATCTTT...CATTTTGATCTGTAACTGCACAACCCTGGGGTTTGCTGCAGAGCTATTTCTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CCA 90 bp ATGGGTTTAACTAACAGACTAAGGACATGCACTGATTACAGGACTCTGTCCCAGAGACATTCTTACCGATaGCCCATAAATACCCAGAAT +
Preference number: 4 (lower is better)
Translates to: MGLTNRLRTCTDYRTLSQRHSYR*PINTQN
Trigger: ATTCTGGGTATTTATGGGCCATCGGTAAGAATGTCT...CTGGGACAGAGTCCTGTAATCAGTGCATGTCCTTAGTCTGTTAGTTAAACCCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CCA 90 bp TTGATGTACTTGCCCTCACATCCATTTACCACCAATGCATACATAGTACATGAATCAAAGAGGGAAGCGTaGTCAAAGTTACAGGGGTTG +
Preference number: 4 (lower is better)
Translates to: LMYLPSHPFTTNAYIVHESKREA*SKLQGL
Trigger: CAACCCCTGTAACTTTGACCACGCTTCCCTCTTTGA...TTCATGTACTATGTATGCATTGGTGGTAAATGGATGTGAGGGCAAGTACATCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CCA 90 bp TCTTGGTACCACATAGCTAAAATGGCAGTTGTATTGATAAACATCTCATGGGCATCAAAGAGGGAAGCGTaGTCAAAGTTACAGGGGTTG +
Preference number: 4 (lower is better)
Translates to: SWYHIAKMAVVLINISWASKREA*SKLQGL
Trigger: CAACCCCTGTAACTTTGACCACGCTTCCCTCTTTGA...TGCCCATGAGATGTTTATCAATACAACTGCCATTTTAGCTATGTGGTACCAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CCA 90 bp TTCCATAACTGTAGGCTTTATATAAGGCAAAAGCAAGATGGATCCACTACTTTATCAGGCCTGTTCCCATaGACATGGGATGCACAGAAG +
Preference number: 4 (lower is better)
Translates to: FHNCRLYIRQKQDGSTTLSGLFP*TWDAQK
Trigger: CTTCTGTGCATCCCATGTCCATGGGAACAGGCCTGA...TAAAGTAGTGGATCCATCTTGCTTTTGCCTTATATAAAGCCTACAGTTATGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357948.7
ENST00000383710.9
CDS-3UTR CCA 90 bp CAAACCCCAGGGTTGTGCAGTTACAGATCAAAATGCAATGTACATGACAGATATCAAAGCCCCTGTGAATaGATTGTGCAATTGAGGACT +
Preference number: 4 (lower is better)
Translates to: QTPGLCSYRSKCNVHDRYQSPCE*IVQLRT
Trigger: AGTCCTCAATTGCACAATCCATTCACAGGGGCTTTG...ATATCTGTCATGTACATTGCATTTTGATCTGTAACTGCACAACCCTGGGGTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CCA 90 bp AGTCATGATAGGATCGCCCCCTTGCCGTGGCAATTAAGAGAATCAATCCATTGGAGAGAATCAATCCATTaGTATGTAGCCATCCTTTTT +
Preference number: 4 (lower is better)
Translates to: SHDRIAPLPWQLRESIHWRESIH*YVAILF
Trigger: AAAAAGGATGGCTACATACCAATGGATTGATTCTCT...CCAATGGATTGATTCTCTTAATTGCCACGGCAAGGGGGCGATCCTATCATGACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
CDS-3UTR CCA 90 bp TTGATGTACTTGCCCTCACATCCATTTACCACCAATGCATACATAGTACATGAAATCGCCCCCTTGCCGTaGCAATTAAGAGAATCAATC +
Preference number: 4 (lower is better)
Translates to: LMYLPSHPFTTNAYIVHEIAPLP*QLRESI
Trigger: GATTGATTCTCTTAATTGCCACGGCAAGGGGGCGAT...TTCATGTACTATGTATGCATTGGTGGTAAATGGATGTGAGGGCAAGTACATCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
CDS-3UTR CCA 90 bp GAAAGAAATAGCTCTGCAGCAAACCCCAGGGTTGTGCAGTTACAGATCAAAATGAAGGCAAAAGCAAGATaGATCCACTACTTTACATGG +
Preference number: 4 (lower is better)
Translates to: ERNSSAANPRVVQLQIKMKAKAR*IHYFTW
Trigger: CCATGTAAAGTAGTGGATCCATCTTGCTTTTGCCTT...CATTTTGATCTGTAACTGCACAACCCTGGGGTTTGCTGCAGAGCTATTTCTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
CDS-3UTR TCA 90 bp CAAACCCCAGGGTTGTGCAGTTACAGATCAAAATGCAATGTACATGACAGATATGATGTTCGAACTTCTTaGTCCCAAGAATGTTCTGGA +
Preference number: 4 (lower is better)
Translates to: QTPGLCSYRSKCNVHDRYDVRTS*SQECSG
Trigger: TCCAGAACATTCTTGGGATCAAGAAGTTCGAACATC...ATATCTGTCATGTACATTGCATTTTGATCTGTAACTGCACAACCCTGGGGTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR TCA 90 bp ATTGCTTGTAAACATATAGACATGGACATCAGGAAATCAGTGGATATGAAGGTCTTAGAAGCCTCGGCCTaGTCAGTCTGTAGTTTCTCT +
Preference number: 4 (lower is better)
Translates to: IACKHIDMDIRKSVDMKVLEASA*SVCSFS
Trigger: AGAGAAACTACAGACTGATCAGGCCGAGGCTTCTAA...GACCTTCATATCCACTGATTTCCTGATGTCCATGTCTATATGTTTACAAGCAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR TCA 90 bp CAAACCCCAGGGTTGTGCAGTTACAGATCAAAATGCAATGTACATGACAGATATGAATGCTTCATGTTTTaGGGCTTATCCATTCGGACA +
Preference number: 4 (lower is better)
Translates to: QTPGLCSYRSKCNVHDRYECFMF*GLSIRT
Trigger: TGTCCGAATGGATAAGCCTCAAAACATGAAGCATTC...ATATCTGTCATGTACATTGCATTTTGATCTGTAACTGCACAACCCTGGGGTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR TCA 90 bp TCTTGGTACCACATAGCTAAAATGGCAGTTGTATTGATAAACATCTCATGGGCACTCGGAGCCTCTCTTTaGTTTCTTCAAAACGTTCCT +
Preference number: 4 (lower is better)
Translates to: SWYHIAKMAVVLINISWALGASL*FLQNVP
Trigger: AGGAACGTTTTGAAGAAATCAAAGAGAGGCTCCGAG...TGCCCATGAGATGTTTATCAATACAACTGCCATTTTAGCTATGTGGTACCAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR TCA 90 bp TTGATGTACTTGCCCTCACATCCATTTACCACCAATGCATACATAGTACATGAACTCGGAGCCTCTCTTTaGTTTCTTCAAAACGTTCCT +
Preference number: 4 (lower is better)
Translates to: LMYLPSHPFTTNAYIVHELGASL*FLQNVP
Trigger: AGGAACGTTTTGAAGAAATCAAAGAGAGGCTCCGAG...TTCATGTACTATGTATGCATTGGTGGTAAATGGATGTGAGGGCAAGTACATCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR TCA 90 bp TTCCATAACTGTAGGCTTTATATAAGGCAAAAGCAAGATGGATCCACTACTTTAAGAGCCGAGAATAGTTaGCTAACGCAGCCTGTTCCA +
Preference number: 4 (lower is better)
Translates to: FHNCRLYIRQKQDGSTTLRAENS*LTQPVP
Trigger: TGGAACAGGCTGCGTTAGTCAACTATTCTCGGCTCT...TAAAGTAGTGGATCCATCTTGCTTTTGCCTTATATAAAGCCTACAGTTATGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR TCA 90 bp TCTTGGTACCACATAGCTAAAATGGCAGTTGTATTGATAAACATCTCATGGGCAGATTTTGGCATACTCTaGGAGCCGAGAATAGTTGAC +
Preference number: 4 (lower is better)
Translates to: SWYHIAKMAVVLINISWADFGIL*EPRIVD
Trigger: GTCAACTATTCTCGGCTCTCAGAGTATGCCAAAATC...TGCCCATGAGATGTTTATCAATACAACTGCCATTTTAGCTATGTGGTACCAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR TCA 90 bp TTGATGTACTTGCCCTCACATCCATTTACCACCAATGCATACATAGTACATGAAAATGGATTGTGCAATTaGGGACTCCATCAGATCCAC +
Preference number: 4 (lower is better)
Translates to: LMYLPSHPFTTNAYIVHENGLCN*GLHQIH
Trigger: GTGGATCTGATGGAGTCCTCAATTGCACAATCCATT...TTCATGTACTATGTATGCATTGGTGGTAAATGGATGTGAGGGCAAGTACATCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR TCA 90 bp AATGTACTTGATGTACTTGCCCTCACATCCATTTACCACCAATGCATACATAGTTGTACATCTCCTCATTaGCCTTATCACGCAGGACAT +
Preference number: 4 (lower is better)
Translates to: NVLDVLALTSIYHQCIHSCTSPH*PYHAGH
Trigger: ATGTCCTGCGTGATAAGGTCAATGAGGAGATGTACA...ACTATGTATGCATTGGTGGTAAATGGATGTGAGGGCAAGTACATCAAGTACATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
CDS-3UTR TCA 90 bp TCTTGGTACCACATAGCTAAAATGGCAGTTGTATTGATAAACATCTCATGGGCACATGGGCATGGTAGTTaGCAGAAAATTCCTAATGGG +
Preference number: 4 (lower is better)
Translates to: SWYHIAKMAVVLINISWAHGHGS*QKIPNG
Trigger: CCCATTAGGAATTTTCTGTCAACTACCATGCCCATG...TGCCCATGAGATGTTTATCAATACAACTGCCATTTTAGCTATGTGGTACCAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
CDS-3UTR TCA 90 bp ATGGGTTTAACTAACAGACTAAGGACATGCACTGATTACAGGACTCTGTCCCAGGGAAATCAGTGGATATaGAGGTCATTTGCTAATCTT +
Preference number: 4 (lower is better)
Translates to: MGLTNRLRTCTDYRTLSQGNQWI*RSFANL
Trigger: AAGATTAGCAAATGACCTTCATATCCACTGATTTCC...CTGGGACAGAGTCCTGTAATCAGTGCATGTCCTTAGTCTGTTAGTTAAACCCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
CDS-3UTR TCA 90 bp CAAACCCCAGGGTTGTGCAGTTACAGATCAAAATGCAATGTACATGACAGATATTGGCATCCACATACGTaGAACAGAGTGAATGTACTT +
Preference number: 4 (lower is better)
Translates to: QTPGLCSYRSKCNVHDRYWHPHT*NRVNVL
Trigger: AAGTACATTCACTCTGTTTCACGTATGTGGATGCCA...ATATCTGTCATGTACATTGCATTTTGATCTGTAACTGCACAACCCTGGGGTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
CDS-3UTR TCA 90 bp TTCCATAACTGTAGGCTTTATATAAGGCAAAAGCAAGATGGATCCACTACTTTATATAGCAGCCATCCATaGCGGTGCCGAAAAAGTAGG +
Preference number: 4 (lower is better)
Translates to: FHNCRLYIRQKQDGSTTLYSSHP*RCRKSR
Trigger: CCTACTTTTTCGGCACCGTCATGGATGGCTGCTATA...TAAAGTAGTGGATCCATCTTGCTTTTGCCTTATATAAAGCCTACAGTTATGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000383710.9
ENST00000473635.5
CDS-3UTR TCA 90 bp AATGTACTTGATGTACTTGCCCTCACATCCATTTACCACCAATGCATACATAGTTACACATGCATTTGTTaGCTGTTCCCATGGACATGG +
Preference number: 4 (lower is better)
Translates to: NVLDVLALTSIYHQCIHSYTCIC*LFPWTW
Trigger: CCATGTCCATGGGAACAGTCAACAAATGCATGTGTA...ACTATGTATGCATTGGTGGTAAATGGATGTGAGGGCAAGTACATCAAGTACATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612439.4
CDS-3UTR GCA 90 bp ATTGCTTGTAAACATATAGACATGGACATCAGGAAATCAGTGGATATGAAGGTCTTGACTGTCTGCAGCTaGTGTTTGCTGATCTTCTGC +
Preference number: 4 (lower is better)
Translates to: IACKHIDMDIRKSVDMKVLTVCS*CLLIFC
Trigger: GCAGAAGATCAGCAAACAGCAGCTGCAGACAGTCAA...GACCTTCATATCCACTGATTTCCTGATGTCCATGTCTATATGTTTACAAGCAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR GCA 90 bp CAAACCCCAGGGTTGTGCAGTTACAGATCAAAATGCAATGTACATGACAGATATCTTCCACCTCCATTGTaGAATATACGATGCGATTTG +
Preference number: 4 (lower is better)
Translates to: QTPGLCSYRSKCNVHDRYLPPPL*NIRCDL
Trigger: CAAATCGCATCGTATATTGCACAATGGAGGTGGAAG...ATATCTGTCATGTACATTGCATTTTGATCTGTAACTGCACAACCCTGGGGTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR GCA 90 bp ATTGCTTGTAAACATATAGACATGGACATCAGGAAATCAGTGGATATGAAGGTCGAGACTGTCATTTTGTaGCACTCTGACTGTTTGGGG +
Preference number: 4 (lower is better)
Translates to: IACKHIDMDIRKSVDMKVETVIL*HSDCLG
Trigger: CCCCAAACAGTCAGAGTGGCACAAAATGACAGTCTC...GACCTTCATATCCACTGATTTCCTGATGTCCATGTCTATATGTTTACAAGCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR GCA 90 bp AATGTACTTGATGTACTTGCCCTCACATCCATTTACCACCAATGCATACATAGTTCTTCTCCCGATAACTaGACATGGCAAACGTGTACT +
Preference number: 4 (lower is better)
Translates to: NVLDVLALTSIYHQCIHSSSPDN*TWQTCT
Trigger: AGTACACGTTTGCCATGTGCAGTTATCGGGAGAAGA...ACTATGTATGCATTGGTGGTAAATGGATGTGAGGGCAAGTACATCAAGTACATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR GCA 90 bp ATTGCTTGTAAACATATAGACATGGACATCAGGAAATCAGTGGATATGAAGGTCAGGAACGTCTCCGCATaGTCCACCATTAAATCTGAC +
Preference number: 4 (lower is better)
Translates to: IACKHIDMDIRKSVDMKVRNVSA*STIKSD
Trigger: GTCAGATTTAATGGTGGAGCATGCGGAGACGTTCCT...GACCTTCATATCCACTGATTTCCTGATGTCCATGTCTATATGTTTACAAGCAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR GCA 90 bp AATGTACTTGATGTACTTGCCCTCACATCCATTTACCACCAATGCATACATAGTTTCGATCATGTCACTTaGCATCAACTTCAGCCGTTG +
Preference number: 4 (lower is better)
Translates to: NVLDVLALTSIYHQCIHSFDHVT*HQLQPL
Trigger: CAACGGCTGAAGTTGATGGCAAGTGACATGATCGAA...ACTATGTATGCATTGGTGGTAAATGGATGTGAGGGCAAGTACATCAAGTACATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
CDS-3UTR GCA 90 bp TCAACAACATTACTAATTCCATCTTTCTCATTCACGTCACTTTGCAAGCTGGCATCATTCACGTCACTTTaGAAGCTGGCACGGATTTAC +
Preference number: 4 (lower is better)
Translates to: STTLLIPSFSFTSLCKLASFTSL*KLARIY
Trigger: GTAAATCCGTGCCAGCTTGCAAAGTGACGTGAATGA...TGCCAGCTTGCAAAGTGACGTGAATGAGAAAGATGGAATTAGTAATGTTGTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490353.2
CDS-3UTR GCA 90 bp ACTTCGTTTTGCTGGAATGCCCTTGCCACCCTTTCTGTACTTGCAAATGCTTTCTTCTGTACTTGCAAATaGTTTCTAGCCAAATTCAAG +
Preference number: 4 (lower is better)
Translates to: TSFCWNALATLSVLANAFFCTCK*FLAKFK
Trigger: CTTGAATTTGGCTAGAAAGCATTTGCAAGTACAGAA...GAAAGCATTTGCAAGTACAGAAAGGGTGGCAAGGGCATTCCAGCAAAACGAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490353.2
CDS-3UTR CCA 90 bp ATTGCTTGTAAACATATAGACATGGACATCAGGAAATCAGTGGATATGAAGGTCCGTTCCCTGGCTATTTaGTCTGCCATTTGTAGACGT +
Preference number: 4 (lower is better)
Translates to: IACKHIDMDIRKSVDMKVRSLAI*SAICRR
Trigger: ACGTCTACAAATGGCAGACCAAATAGCCAGGGAACG...GACCTTCATATCCACTGATTTCCTGATGTCCATGTCTATATGTTTACAAGCAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CCA 90 bp TCTTGGTACCACATAGCTAAAATGGCAGTTGTATTGATAAACATCTCATGGGCAATGATGGAAGCATTGTaGCTGCGTTTGAGTTTCTGG +
Preference number: 4 (lower is better)
Translates to: SWYHIAKMAVVLINISWAMMEAL*LRLSFW
Trigger: CCAGAAACTCAAACGCAGCCACAATGCTTCCATCAT...TGCCCATGAGATGTTTATCAATACAACTGCCATTTTAGCTATGTGGTACCAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CCA 90 bp TTGATGTACTTGCCCTCACATCCATTTACCACCAATGCATACATAGTACATGAAATGATGGAAGCATTGTaGCTGCGTTTGAGTTTCTGG +
Preference number: 4 (lower is better)
Translates to: LMYLPSHPFTTNAYIVHEMMEAL*LRLSFW
Trigger: CCAGAAACTCAAACGCAGCCACAATGCTTCCATCAT...TTCATGTACTATGTATGCATTGGTGGTAAATGGATGTGAGGGCAAGTACATCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CCA 90 bp TCTTGGTACCACATAGCTAAAATGGCAGTTGTATTGATAAACATCTCATGGGCACTTGTTCATCGTCACTaGCAAATATCACGGTGTCTC +
Preference number: 4 (lower is better)
Translates to: SWYHIAKMAVVLINISWALVHRH*QISRCL
Trigger: GAGACACCGTGATATTTGCCAGTGACGATGAACAAG...TGCCCATGAGATGTTTATCAATACAACTGCCATTTTAGCTATGTGGTACCAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CCA 90 bp TTCCATAACTGTAGGCTTTATATAAGGCAAAAGCAAGATGGATCCACTACTTTACTGTTCCCATGGACATaGGATGCACAGAAGGCAAAG +
Preference number: 4 (lower is better)
Translates to: FHNCRLYIRQKQDGSTTLLFPWT*DAQKAK
Trigger: CTTTGCCTTCTGTGCATCCCATGTCCATGGGAACAG...TAAAGTAGTGGATCCATCTTGCTTTTGCCTTATATAAAGCCTACAGTTATGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CCA 90 bp GAAAGAAATAGCTCTGCAGCAAACCCCAGGGTTGTGCAGTTACAGATCAAAATGTTCAGGTCGACCAAATaGAAAGCAATACCTAAAATG +
Preference number: 4 (lower is better)
Translates to: ERNSSAANPRVVQLQIKMFRSTK*KAIPKM
Trigger: CATTTTAGGTATTGCTTTCCATTTGGTCGACCTGAA...CATTTTGATCTGTAACTGCACAACCCTGGGGTTTGCTGCAGAGCTATTTCTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CCA 90 bp ATGGGTTTAACTAACAGACTAAGGACATGCACTGATTACAGGACTCTGTCCCAGTTCAGGTCGACCAAATaGAAAGCAATACCTAAAATG +
Preference number: 4 (lower is better)
Translates to: MGLTNRLRTCTDYRTLSQFRSTK*KAIPKM
Trigger: CATTTTAGGTATTGCTTTCCATTTGGTCGACCTGAA...CTGGGACAGAGTCCTGTAATCAGTGCATGTCCTTAGTCTGTTAGTTAAACCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CCA 90 bp TCTTGGTACCACATAGCTAAAATGGCAGTTGTATTGATAAACATCTCATGGGCACAAAGCCCCTGTGAATaGATTGTGCAATTGAGGACT +
Preference number: 4 (lower is better)
Translates to: SWYHIAKMAVVLINISWAQSPCE*IVQLRT
Trigger: AGTCCTCAATTGCACAATCCATTCACAGGGGCTTTG...TGCCCATGAGATGTTTATCAATACAACTGCCATTTTAGCTATGTGGTACCAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CCA 90 bp CAAACCCCAGGGTTGTGCAGTTACAGATCAAAATGCAATGTACATGACAGATATTCCCTTCGTCATATCTaGATAATTTTGCCAGCACTC +
Preference number: 4 (lower is better)
Translates to: QTPGLCSYRSKCNVHDRYSLRHI*IILPAL
Trigger: GAGTGCTGGCAAAATTATCCAGATATGACGAAGGGA...ATATCTGTCATGTACATTGCATTTTGATCTGTAACTGCACAACCCTGGGGTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
CDS-3UTR CCA 90 bp CAAACCCCAGGGTTGTGCAGTTACAGATCAAAATGCAATGTACATGACAGATATGACTCTAGGACCAAATaGTCTAATCGTCTTCTTCGT +
Preference number: 4 (lower is better)
Translates to: QTPGLCSYRSKCNVHDRYDSRTK*SNRLLR
Trigger: ACGAAGAAGACGATTAGACCATTTGGTCCTAGAGTC...ATATCTGTCATGTACATTGCATTTTGATCTGTAACTGCACAACCCTGGGGTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
CDS-3UTR CCA 90 bp ATTGCTTGTAAACATATAGACATGGACATCAGGAAATCAGTGGATATGAAGGTCTTCAGGGTCTGTATTTaGTGGCAGCCCACTAAGGTA +
Preference number: 4 (lower is better)
Translates to: IACKHIDMDIRKSVDMKVFRVCI*WQPTKV
Trigger: TACCTTAGTGGGCTGCCACCAAATACAGACCCTGAA...GACCTTCATATCCACTGATTTCCTGATGTCCATGTCTATATGTTTACAAGCAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612439.4
CDS-3UTR TCA 90 bp ATTGCTTGTAAACATATAGACATGGACATCAGGAAATCAGTGGATATGAAGGTCAATTACCACCTCCAATaGGAAAGACAGCACGACATC +
Preference number: 4 (lower is better)
Translates to: IACKHIDMDIRKSVDMKVNYHLQ*ERQHDI
Trigger: GATGTCGTGCTGTCTTTCTCATTGGAGGTGGTAATT...GACCTTCATATCCACTGATTTCCTGATGTCCATGTCTATATGTTTACAAGCAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR TCA 90 bp AATGTACTTGATGTACTTGCCCTCACATCCATTTACCACCAATGCATACATAGTGAATGCTTCATGTTTTaGGGCTTATCCATTCGGACA +
Preference number: 4 (lower is better)
Translates to: NVLDVLALTSIYHQCIHSECFMF*GLSIRT
Trigger: TGTCCGAATGGATAAGCCTCAAAACATGAAGCATTC...ACTATGTATGCATTGGTGGTAAATGGATGTGAGGGCAAGTACATCAAGTACATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR TCA 90 bp TTCCATAACTGTAGGCTTTATATAAGGCAAAAGCAAGATGGATCCACTACTTTAATGGCAAACGTGTACTaGCTGACCTGCACCAATACA +
Preference number: 4 (lower is better)
Translates to: FHNCRLYIRQKQDGSTTLMANVY*LTCTNT
Trigger: TGTATTGGTGCAGGTCAGTCAGTACACGTTTGCCAT...TAAAGTAGTGGATCCATCTTGCTTTTGCCTTATATAAAGCCTACAGTTATGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR TCA 90 bp ATTGCTTGTAAACATATAGACATGGACATCAGGAAATCAGTGGATATGAAGGTCGATTTTGGCATACTCTaGGAGCCGAGAATAGTTGAC +
Preference number: 4 (lower is better)
Translates to: IACKHIDMDIRKSVDMKVDFGIL*EPRIVD
Trigger: GTCAACTATTCTCGGCTCTCAGAGTATGCCAAAATC...GACCTTCATATCCACTGATTTCCTGATGTCCATGTCTATATGTTTACAAGCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR TCA 90 bp ATTGCTTGTAAACATATAGACATGGACATCAGGAAATCAGTGGATATGAAGGTCGCTTTTTGGCAGGAGTaGTTAACCGGCCTACATTTT +
Preference number: 4 (lower is better)
Translates to: IACKHIDMDIRKSVDMKVAFWQE*LTGLHF
Trigger: AAAATGTAGGCCGGTTAATCACTCCTGCCAAAAAGC...GACCTTCATATCCACTGATTTCCTGATGTCCATGTCTATATGTTTACAAGCAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR TCA 90 bp TCTTGGTACCACATAGCTAAAATGGCAGTTGTATTGATAAACATCTCATGGGCAGCTGAAGAACTTCAATaGCTAGTTCAGCAAGACGTA +
Preference number: 4 (lower is better)
Translates to: SWYHIAKMAVVLINISWAAEELQ*LVQQDV
Trigger: TACGTCTTGCTGAACTAGTCATTGAAGTTCTTCAGC...TGCCCATGAGATGTTTATCAATACAACTGCCATTTTAGCTATGTGGTACCAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR TCA 90 bp TCTTGGTACCACATAGCTAAAATGGCAGTTGTATTGATAAACATCTCATGGGCAAAACATGGTGCATATTaGCTGTGGGACTCGAAAATC +
Preference number: 4 (lower is better)
Translates to: SWYHIAKMAVVLINISWAKHGAY*LWDSKI
Trigger: GATTTTCGAGTCCCACAGTCAATATGCACCATGTTT...TGCCCATGAGATGTTTATCAATACAACTGCCATTTTAGCTATGTGGTACCAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
CDS-3UTR TCA 90 bp TTGATGTACTTGCCCTCACATCCATTTACCACCAATGCATACATAGTACATGAAAAACATGGTGCATATTaGCTGTGGGACTCGAAAATC +
Preference number: 4 (lower is better)
Translates to: LMYLPSHPFTTNAYIVHEKHGAY*LWDSKI
Trigger: GATTTTCGAGTCCCACAGTCAATATGCACCATGTTT...TTCATGTACTATGTATGCATTGGTGGTAAATGGATGTGAGGGCAAGTACATCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
CDS-3UTR TCA 90 bp AATGTACTTGATGTACTTGCCCTCACATCCATTTACCACCAATGCATACATAGTAAACATGGTGCATATTaGCTGTGGGACTCGAAAATC +
Preference number: 4 (lower is better)
Translates to: NVLDVLALTSIYHQCIHSKHGAY*LWDSKI
Trigger: GATTTTCGAGTCCCACAGTCAATATGCACCATGTTT...ACTATGTATGCATTGGTGGTAAATGGATGTGAGGGCAAGTACATCAAGTACATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
CDS-3UTR TCA 90 bp TTGATGTACTTGCCCTCACATCCATTTACCACCAATGCATACATAGTACATGAAGCTGCAAAGTTTTGTTaGTTGAGCTTTGGCATCAAC +
Preference number: 4 (lower is better)
Translates to: LMYLPSHPFTTNAYIVHEAAKFC*LSFGIN
Trigger: GTTGATGCCAAAGCTCAATCAACAAAACTTTGCAGC...TTCATGTACTATGTATGCATTGGTGGTAAATGGATGTGAGGGCAAGTACATCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
CDS-3UTR TCA 90 bp TTCCATAACTGTAGGCTTTATATAAGGCAAAAGCAAGATGGATCCACTACTTTAACTAAGGACATGCACTaGTTACAGGACTCTGTCCCA +
Preference number: 4 (lower is better)
Translates to: FHNCRLYIRQKQDGSTTLTKDMH*LQDSVP
Trigger: TGGGACAGAGTCCTGTAATCAGTGCATGTCCTTAGT...TAAAGTAGTGGATCCATCTTGCTTTTGCCTTATATAAAGCCTACAGTTATGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
CDS-3UTR TCA 90 bp TTGATGTACTTGCCCTCACATCCATTTACCACCAATGCATACATAGTACATGAATGGCATCCACATACGTaGAACAGAGTGAATGTACTT +
Preference number: 4 (lower is better)
Translates to: LMYLPSHPFTTNAYIVHEWHPHT*NRVNVL
Trigger: AAGTACATTCACTCTGTTTCACGTATGTGGATGCCA...TTCATGTACTATGTATGCATTGGTGGTAAATGGATGTGAGGGCAAGTACATCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
CDS-3UTR GCA 90 bp TTGATGTACTTGCCCTCACATCCATTTACCACCAATGCATACATAGTACATGAACAAACTTGGGAAATTTaGGTTCCCTGGCTATTTGGT +
Preference number: 4 (lower is better)
Translates to: LMYLPSHPFTTNAYIVHEQTWEI*VPWLFG
Trigger: ACCAAATAGCCAGGGAACGCAAATTTCCCAAGTTTG...TTCATGTACTATGTATGCATTGGTGGTAAATGGATGTGAGGGCAAGTACATCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR GCA 90 bp AATGTACTTGATGTACTTGCCCTCACATCCATTTACCACCAATGCATACATAGTCTTCCACCTCCATTGTaGAATATACGATGCGATTTG +
Preference number: 4 (lower is better)
Translates to: NVLDVLALTSIYHQCIHSLPPPL*NIRCDL
Trigger: CAAATCGCATCGTATATTGCACAATGGAGGTGGAAG...ACTATGTATGCATTGGTGGTAAATGGATGTGAGGGCAAGTACATCAAGTACATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR GCA 90 bp TTCCATAACTGTAGGCTTTATATAAGGCAAAAGCAAGATGGATCCACTACTTTAGAGACTGTCATTTTGTaGCACTCTGACTGTTTGGGG +
Preference number: 4 (lower is better)
Translates to: FHNCRLYIRQKQDGSTTLETVIL*HSDCLG
Trigger: CCCCAAACAGTCAGAGTGGCACAAAATGACAGTCTC...TAAAGTAGTGGATCCATCTTGCTTTTGCCTTATATAAAGCCTACAGTTATGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR GCA 90 bp TCTTGGTACCACATAGCTAAAATGGCAGTTGTATTGATAAACATCTCATGGGCAGGCCCATTTCCATGCTaGAAAGTTTTGTTGATTGAG +
Preference number: 4 (lower is better)
Translates to: SWYHIAKMAVVLINISWAGPFPC*KVLLIE
Trigger: CTCAATCAACAAAACTTTGCAGCATGGAAATGGGCC...TGCCCATGAGATGTTTATCAATACAACTGCCATTTTAGCTATGTGGTACCAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
CDS-3UTR GCA 90 bp AATGTACTTGATGTACTTGCCCTCACATCCATTTACCACCAATGCATACATAGTGGCCCATTTCCATGCTaGAAAGTTTTGTTGATTGAG +
Preference number: 4 (lower is better)
Translates to: NVLDVLALTSIYHQCIHSGPFPC*KVLLIE
Trigger: CTCAATCAACAAAACTTTGCAGCATGGAAATGGGCC...ACTATGTATGCATTGGTGGTAAATGGATGTGAGGGCAAGTACATCAAGTACATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
CDS-3UTR GCA 90 bp TTGATGTACTTGCCCTCACATCCATTTACCACCAATGCATACATAGTACATGAAGGCCCATTTCCATGCTaGAAAGTTTTGTTGATTGAG +
Preference number: 4 (lower is better)
Translates to: LMYLPSHPFTTNAYIVHEGPFPC*KVLLIE
Trigger: CTCAATCAACAAAACTTTGCAGCATGGAAATGGGCC...TTCATGTACTATGTATGCATTGGTGGTAAATGGATGTGAGGGCAAGTACATCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
CDS-3UTR GCA 90 bp CAAACCCCAGGGTTGTGCAGTTACAGATCAAAATGCAATGTACATGACAGATATCTTGGCCCATTTCCATaGTGCAAAGTTTTGTTGATT +
Preference number: 4 (lower is better)
Translates to: QTPGLCSYRSKCNVHDRYLGPFP*CKVLLI
Trigger: AATCAACAAAACTTTGCAGCATGGAAATGGGCCAAG...ATATCTGTCATGTACATTGCATTTTGATCTGTAACTGCACAACCCTGGGGTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
CDS-3UTR GCA 90 bp ATGGGTTTAACTAACAGACTAAGGACATGCACTGATTACAGGACTCTGTCCCAGGATAGTAACGAACTTTaGAACCAAGAGTGTTATCAT +
Preference number: 4 (lower is better)
Translates to: MGLTNRLRTCTDYRTLSQDSNEL*NQECYH
Trigger: ATGATAACACTCTTGGTTGCAAAGTTCGTTACTATC...CTGGGACAGAGTCCTGTAATCAGTGCATGTCCTTAGTCTGTTAGTTAAACCCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
CDS-3UTR GCA 90 bp AATGTACTTGATGTACTTGCCCTCACATCCATTTACCACCAATGCATACATAGTTCGTTTCATAGGTCTTaGTGTTTAAGGTGGAGTCCA +
Preference number: 4 (lower is better)
Translates to: NVLDVLALTSIYHQCIHSSFHRS*CLRWSP
Trigger: TGGACTCCACCTTAAACAGCAAGACCTATGAAACGA...ACTATGTATGCATTGGTGGTAAATGGATGTGAGGGCAAGTACATCAAGTACATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
CDS-3UTR GCA 90 bp TCTTGGTACCACATAGCTAAAATGGCAGTTGTATTGATAAACATCTCATGGGCAAACAGACTAAGGACATaGACTGATTACAGGACTCTG +
Preference number: 4 (lower is better)
Translates to: SWYHIAKMAVVLINISWANRLRT*TDYRTL
Trigger: CAGAGTCCTGTAATCAGTGCATGTCCTTAGTCTGTT...TGCCCATGAGATGTTTATCAATACAACTGCCATTTTAGCTATGTGGTACCAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
CDS-3UTR GCA 90 bp ATTGCTTGTAAACATATAGACATGGACATCAGGAAATCAGTGGATATGAAGGTCCAAACCCCAGGGTTGTaGAGTTACAGATCAAAATGC +
Preference number: 4 (lower is better)
Translates to: IACKHIDMDIRKSVDMKVQTPGL*SYRSKC
Trigger: GCATTTTGATCTGTAACTGCACAACCCTGGGGTTTG...GACCTTCATATCCACTGATTTCCTGATGTCCATGTCTATATGTTTACAAGCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
CDS-3UTR GCA 90 bp TTCCATAACTGTAGGCTTTATATAAGGCAAAAGCAAGATGGATCCACTACTTTAACAGATCTTCTGAGGTaGCTGACCCATTATCCGCAT +
Preference number: 4 (lower is better)
Translates to: FHNCRLYIRQKQDGSTTLTDLLR*LTHYPH
Trigger: ATGCGGATAATGGGTCAGGCACCTCAGAAGATCTGT...TAAAGTAGTGGATCCATCTTGCTTTTGCCTTATATAAAGCCTACAGTTATGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383710.9
ENST00000473635.5
CDS-3UTR CCA 90 bp TTGATGTACTTGCCCTCACATCCATTTACCACCAATGCATACATAGTACATGAAGAAATTTGCGTTCCCTaGCTATTTGGTCTGCCATTT +
Preference number: 4 (lower is better)
Translates to: LMYLPSHPFTTNAYIVHEEICVP*LFGLPF
Trigger: AAATGGCAGACCAAATAGCCAGGGAACGCAAATTTC...TTCATGTACTATGTATGCATTGGTGGTAAATGGATGTGAGGGCAAGTACATCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CCA 90 bp AATGTACTTGATGTACTTGCCCTCACATCCATTTACCACCAATGCATACATAGTCTTTGGATACAAACTTaGGAAATTTGCGTTCCCTGG +
Preference number: 4 (lower is better)
Translates to: NVLDVLALTSIYHQCIHSLWIQT*EICVPW
Trigger: CCAGGGAACGCAAATTTCCCAAGTTTGTATCCAAAG...ACTATGTATGCATTGGTGGTAAATGGATGTGAGGGCAAGTACATCAAGTACATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CCA 90 bp TTGATGTACTTGCCCTCACATCCATTTACCACCAATGCATACATAGTACATGAAATATACGATGCGATTTaGAGCCAAAGATTTGAGGCC +
Preference number: 4 (lower is better)
Translates to: LMYLPSHPFTTNAYIVHEIYDAI*SQRFEA
Trigger: GGCCTCAAATCTTTGGCTCCAAATCGCATCGTATAT...TTCATGTACTATGTATGCATTGGTGGTAAATGGATGTGAGGGCAAGTACATCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CCA 90 bp AATGTACTTGATGTACTTGCCCTCACATCCATTTACCACCAATGCATACATAGTATATACGATGCGATTTaGAGCCAAAGATTTGAGGCC +
Preference number: 4 (lower is better)
Translates to: NVLDVLALTSIYHQCIHSIYDAI*SQRFEA
Trigger: GGCCTCAAATCTTTGGCTCCAAATCGCATCGTATAT...ACTATGTATGCATTGGTGGTAAATGGATGTGAGGGCAAGTACATCAAGTACATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CCA 90 bp TTGATGTACTTGCCCTCACATCCATTTACCACCAATGCATACATAGTACATGAACTCCTCTTGTGGCACTaGGGTAACAATATCTTTCAT +
Preference number: 4 (lower is better)
Translates to: LMYLPSHPFTTNAYIVHELLLWH*GNNIFH
Trigger: ATGAAAGATATTGTTACCCCAGTGCCACAAGAGGAG...TTCATGTACTATGTATGCATTGGTGGTAAATGGATGTGAGGGCAAGTACATCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CCA 90 bp TCTTGGTACCACATAGCTAAAATGGCAGTTGTATTGATAAACATCTCATGGGCATTTTACCTCCTCTTGTaGCACTGGGGTAACAATATC +
Preference number: 4 (lower is better)
Translates to: SWYHIAKMAVVLINISWAFYLLL*HWGNNI
Trigger: GATATTGTTACCCCAGTGCCACAAGAGGAGGTAAAA...TGCCCATGAGATGTTTATCAATACAACTGCCATTTTAGCTATGTGGTACCAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CCA 90 bp AATGTACTTGATGTACTTGCCCTCACATCCATTTACCACCAATGCATACATAGTTTTTACCTCCTCTTGTaGCACTGGGGTAACAATATC +
Preference number: 4 (lower is better)
Translates to: NVLDVLALTSIYHQCIHSFYLLL*HWGNNI
Trigger: GATATTGTTACCCCAGTGCCACAAGAGGAGGTAAAA...ACTATGTATGCATTGGTGGTAAATGGATGTGAGGGCAAGTACATCAAGTACATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CCA 90 bp AATGTACTTGATGTACTTGCCCTCACATCCATTTACCACCAATGCATACATAGTATATCTAACAACAAGTaGGGCAAACAGGTCTTGCAG +
Preference number: 4 (lower is better)
Translates to: NVLDVLALTSIYHQCIHSISNNK*GKQVLQ
Trigger: CTGCAAGACCTGTTTGCCCCACTTGTTGTTAGATAT...ACTATGTATGCATTGGTGGTAAATGGATGTGAGGGCAAGTACATCAAGTACATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CCA 90 bp TTGATGTACTTGCCCTCACATCCATTTACCACCAATGCATACATAGTACATGAATCCCTTCGTCATATCTaGATAATTTTGCCAGCACTC +
Preference number: 4 (lower is better)
Translates to: LMYLPSHPFTTNAYIVHESLRHI*IILPAL
Trigger: GAGTGCTGGCAAAATTATCCAGATATGACGAAGGGA...TTCATGTACTATGTATGCATTGGTGGTAAATGGATGTGAGGGCAAGTACATCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
CDS-3UTR CCA 90 bp AATGTACTTGATGTACTTGCCCTCACATCCATTTACCACCAATGCATACATAGTTCCCTTCGTCATATCTaGATAATTTTGCCAGCACTC +
Preference number: 4 (lower is better)
Translates to: NVLDVLALTSIYHQCIHSSLRHI*IILPAL
Trigger: GAGTGCTGGCAAAATTATCCAGATATGACGAAGGGA...ACTATGTATGCATTGGTGGTAAATGGATGTGAGGGCAAGTACATCAAGTACATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
CDS-3UTR CCA 90 bp AATGTACTTGATGTACTTGCCCTCACATCCATTTACCACCAATGCATACATAGTTGCAGATCACGTTCATaGAGCTGTTGTACCATTGAT +
Preference number: 4 (lower is better)
Translates to: NVLDVLALTSIYHQCIHSCRSRS*SCCTID
Trigger: ATCAATGGTACAACAGCTCCATGAACGTGATCTGCA...ACTATGTATGCATTGGTGGTAAATGGATGTGAGGGCAAGTACATCAAGTACATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
CDS-3UTR CCA 90 bp TTGATGTACTTGCCCTCACATCCATTTACCACCAATGCATACATAGTACATGAATGCAGATCACGTTCATaGAGCTGTTGTACCATTGAT +
Preference number: 4 (lower is better)
Translates to: LMYLPSHPFTTNAYIVHECRSRS*SCCTID
Trigger: ATCAATGGTACAACAGCTCCATGAACGTGATCTGCA...TTCATGTACTATGTATGCATTGGTGGTAAATGGATGTGAGGGCAAGTACATCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
CDS-3UTR CCA 90 bp TCTTGGTACCACATAGCTAAAATGGCAGTTGTATTGATAAACATCTCATGGGCAGACTCTAGGACCAAATaGTCTAATCGTCTTCTTCGT +
Preference number: 4 (lower is better)
Translates to: SWYHIAKMAVVLINISWADSRTK*SNRLLR
Trigger: ACGAAGAAGACGATTAGACCATTTGGTCCTAGAGTC...TGCCCATGAGATGTTTATCAATACAACTGCCATTTTAGCTATGTGGTACCAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
CDS-3UTR CCA 90 bp ATGGGTTTAACTAACAGACTAAGGACATGCACTGATTACAGGACTCTGTCCCAGAGAGAATCAATCCATTaGTATGTAGCCATCCTTTTT +
Preference number: 4 (lower is better)
Translates to: MGLTNRLRTCTDYRTLSQRESIH*YVAILF
Trigger: AAAAAGGATGGCTACATACCAATGGATTGATTCTCT...CTGGGACAGAGTCCTGTAATCAGTGCATGTCCTTAGTCTGTTAGTTAAACCCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
CDS-3UTR TCA 90 bp ATTGCTTGTAAACATATAGACATGGACATCAGGAAATCAGTGGATATGAAGGTCGATGTTCGAACTTCTTaGTCCCAAGAATGTTCTGGA +
Preference number: 4 (lower is better)
Translates to: IACKHIDMDIRKSVDMKVDVRTS*SQECSG
Trigger: TCCAGAACATTCTTGGGATCAAGAAGTTCGAACATC...GACCTTCATATCCACTGATTTCCTGATGTCCATGTCTATATGTTTACAAGCAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR TCA 90 bp TTGATGTACTTGCCCTCACATCCATTTACCACCAATGCATACATAGTACATGAAAACCGGCCTACATTTTaGATGGTTAAATCCATCACT +
Preference number: 4 (lower is better)
Translates to: LMYLPSHPFTTNAYIVHENRPTF*MVKSIT
Trigger: AGTGATGGATTTAACCATTCAAAATGTAGGCCGGTT...TTCATGTACTATGTATGCATTGGTGGTAAATGGATGTGAGGGCAAGTACATCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000283269.13
CDS-3UTR TCA 90 bp ATTGCTTGTAAACATATAGACATGGACATCAGGAAATCAGTGGATATGAAGGTCGCTGAAGAACTTCAATaGCTAGTTCAGCAAGACGTA +
Preference number: 4 (lower is better)
Translates to: IACKHIDMDIRKSVDMKVAEELQ*LVQQDV
Trigger: TACGTCTTGCTGAACTAGTCATTGAAGTTCTTCAGC...GACCTTCATATCCACTGATTTCCTGATGTCCATGTCTATATGTTTACAAGCAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR TCA 90 bp TCTTGGTACCACATAGCTAAAATGGCAGTTGTATTGATAAACATCTCATGGGCATGCTCCTCATTTTGCTaGAGAACTTCAATGACTAGT +
Preference number: 4 (lower is better)
Translates to: SWYHIAKMAVVLINISWACSSFC*RTSMTS
Trigger: ACTAGTCATTGAAGTTCTTCAGCAAAATGAGGAGCA...TGCCCATGAGATGTTTATCAATACAACTGCCATTTTAGCTATGTGGTACCAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR TCA 90 bp TTGATGTACTTGCCCTCACATCCATTTACCACCAATGCATACATAGTACATGAATGCTCCTCATTTTGCTaGAGAACTTCAATGACTAGT +
Preference number: 4 (lower is better)
Translates to: LMYLPSHPFTTNAYIVHECSSFC*RTSMTS
Trigger: ACTAGTCATTGAAGTTCTTCAGCAAAATGAGGAGCA...TTCATGTACTATGTATGCATTGGTGGTAAATGGATGTGAGGGCAAGTACATCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR TCA 90 bp TTGATGTACTTGCCCTCACATCCATTTACCACCAATGCATACATAGTACATGAACAATCCTGGTTCTTTTaGCACAAGATTCGATCATGT +
Preference number: 4 (lower is better)
Translates to: LMYLPSHPFTTNAYIVHEQSWFF*HKIRSC
Trigger: ACATGATCGAATCTTGTGTCAAAAGAACCAGGATTG...TTCATGTACTATGTATGCATTGGTGGTAAATGGATGTGAGGGCAAGTACATCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
CDS-3UTR TCA 90 bp ATTGCTTGTAAACATATAGACATGGACATCAGGAAATCAGTGGATATGAAGGTCGCTGCAAAGTTTTGTTaGTTGAGCTTTGGCATCAAC +
Preference number: 4 (lower is better)
Translates to: IACKHIDMDIRKSVDMKVAAKFC*LSFGIN
Trigger: GTTGATGCCAAAGCTCAATCAACAAAACTTTGCAGC...GACCTTCATATCCACTGATTTCCTGATGTCCATGTCTATATGTTTACAAGCAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
CDS-3UTR TCA 90 bp TTCCATAACTGTAGGCTTTATATAAGGCAAAAGCAAGATGGATCCACTACTTTATGTACATCTCCTCATTaGCCTTATCACGCAGGACAT +
Preference number: 4 (lower is better)
Translates to: FHNCRLYIRQKQDGSTTLCTSPH*PYHAGH
Trigger: ATGTCCTGCGTGATAAGGTCAATGAGGAGATGTACA...TAAAGTAGTGGATCCATCTTGCTTTTGCCTTATATAAAGCCTACAGTTATGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
CDS-3UTR TCA 90 bp ATTGCTTGTAAACATATAGACATGGACATCAGGAAATCAGTGGATATGAAGGTCTGGCATCCACATACGTaGAACAGAGTGAATGTACTT +
Preference number: 4 (lower is better)
Translates to: IACKHIDMDIRKSVDMKVWHPHT*NRVNVL
Trigger: AAGTACATTCACTCTGTTTCACGTATGTGGATGCCA...GACCTTCATATCCACTGATTTCCTGATGTCCATGTCTATATGTTTACAAGCAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
CDS-3UTR GCA 90 bp ATTGCTTGTAAACATATAGACATGGACATCAGGAAATCAGTGGATATGAAGGTCGGCCCATTTCCATGCTaGAAAGTTTTGTTGATTGAG +
Preference number: 4 (lower is better)
Translates to: IACKHIDMDIRKSVDMKVGPFPC*KVLLIE
Trigger: CTCAATCAACAAAACTTTGCAGCATGGAAATGGGCC...GACCTTCATATCCACTGATTTCCTGATGTCCATGTCTATATGTTTACAAGCAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
CDS-3UTR GCA 90 bp TTGATGTACTTGCCCTCACATCCATTTACCACCAATGCATACATAGTACATGAACTTGGCCCATTTCCATaGTGCAAAGTTTTGTTGATT +
Preference number: 4 (lower is better)
Translates to: LMYLPSHPFTTNAYIVHELGPFP*CKVLLI
Trigger: AATCAACAAAACTTTGCAGCATGGAAATGGGCCAAG...TTCATGTACTATGTATGCATTGGTGGTAAATGGATGTGAGGGCAAGTACATCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
CDS-3UTR GCA 90 bp AATGTACTTGATGTACTTGCCCTCACATCCATTTACCACCAATGCATACATAGTCTTGGCCCATTTCCATaGTGCAAAGTTTTGTTGATT +
Preference number: 4 (lower is better)
Translates to: NVLDVLALTSIYHQCIHSLGPFP*CKVLLI
Trigger: AATCAACAAAACTTTGCAGCATGGAAATGGGCCAAG...ACTATGTATGCATTGGTGGTAAATGGATGTGAGGGCAAGTACATCAAGTACATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
CDS-3UTR CCA 90 bp ATTGCTTGTAAACATATAGACATGGACATCAGGAAATCAGTGGATATGAAGGTCGAAATTTGCGTTCCCTaGCTATTTGGTCTGCCATTT +
Preference number: 4 (lower is better)
Translates to: IACKHIDMDIRKSVDMKVEICVP*LFGLPF
Trigger: AAATGGCAGACCAAATAGCCAGGGAACGCAAATTTC...GACCTTCATATCCACTGATTTCCTGATGTCCATGTCTATATGTTTACAAGCAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CCA 90 bp AATGTACTTGATGTACTTGCCCTCACATCCATTTACCACCAATGCATACATAGTAAAGATTTGAGGCCTTaGACTTCCATAATTACCACC +
Preference number: 4 (lower is better)
Translates to: NVLDVLALTSIYHQCIHSKDLRP*TSIITT
Trigger: GGTGGTAATTATGGAAGTCCAAGGCCTCAAATCTTT...ACTATGTATGCATTGGTGGTAAATGGATGTGAGGGCAAGTACATCAAGTACATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CCA 90 bp TTCCATAACTGTAGGCTTTATATAAGGCAAAAGCAAGATGGATCCACTACTTTACTTGTTCATCGTCACTaGCAAATATCACGGTGTCTC +
Preference number: 4 (lower is better)
Translates to: FHNCRLYIRQKQDGSTTLLVHRH*QISRCL
Trigger: GAGACACCGTGATATTTGCCAGTGACGATGAACAAG...TAAAGTAGTGGATCCATCTTGCTTTTGCCTTATATAAAGCCTACAGTTATGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CCA 90 bp TCTTGGTACCACATAGCTAAAATGGCAGTTGTATTGATAAACATCTCATGGGCAGGCCTACATTTTGAATaGTTAAATCCATCACTTGGG +
Preference number: 4 (lower is better)
Translates to: SWYHIAKMAVVLINISWAGLHFE*LNPSLG
Trigger: CCCAAGTGATGGATTTAACCATTCAAAATGTAGGCC...TGCCCATGAGATGTTTATCAATACAACTGCCATTTTAGCTATGTGGTACCAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000283269.13
CDS-3UTR CCA 90 bp ATTGCTTGTAAACATATAGACATGGACATCAGGAAATCAGTGGATATGAAGGTCATATCTAACAACAAGTaGGGCAAACAGGTCTTGCAG +
Preference number: 4 (lower is better)
Translates to: IACKHIDMDIRKSVDMKVISNNK*GKQVLQ
Trigger: CTGCAAGACCTGTTTGCCCCACTTGTTGTTAGATAT...GACCTTCATATCCACTGATTTCCTGATGTCCATGTCTATATGTTTACAAGCAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CCA 90 bp ATTGCTTGTAAACATATAGACATGGACATCAGGAAATCAGTGGATATGAAGGTCTCCCTTCGTCATATCTaGATAATTTTGCCAGCACTC +
Preference number: 4 (lower is better)
Translates to: IACKHIDMDIRKSVDMKVSLRHI*IILPAL
Trigger: GAGTGCTGGCAAAATTATCCAGATATGACGAAGGGA...GACCTTCATATCCACTGATTTCCTGATGTCCATGTCTATATGTTTACAAGCAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
CDS-3UTR CCA 90 bp ATTGCTTGTAAACATATAGACATGGACATCAGGAAATCAGTGGATATGAAGGTCTGCAGATCACGTTCATaGAGCTGTTGTACCATTGAT +
Preference number: 4 (lower is better)
Translates to: IACKHIDMDIRKSVDMKVCRSRS*SCCTID
Trigger: ATCAATGGTACAACAGCTCCATGAACGTGATCTGCA...GACCTTCATATCCACTGATTTCCTGATGTCCATGTCTATATGTTTACAAGCAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
CDS-3UTR CCA 90 bp ATTGCTTGTAAACATATAGACATGGACATCAGGAAATCAGTGGATATGAAGGTCGACTCTAGGACCAAATaGTCTAATCGTCTTCTTCGT +
Preference number: 4 (lower is better)
Translates to: IACKHIDMDIRKSVDMKVDSRTK*SNRLLR
Trigger: ACGAAGAAGACGATTAGACCATTTGGTCCTAGAGTC...GACCTTCATATCCACTGATTTCCTGATGTCCATGTCTATATGTTTACAAGCAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
CDS-3UTR CCA 90 bp TTGATGTACTTGCCCTCACATCCATTTACCACCAATGCATACATAGTACATGAAAAGGCAAAAGCAAGATaGATCCACTACTTTACATGG +
Preference number: 4 (lower is better)
Translates to: LMYLPSHPFTTNAYIVHEKAKAR*IHYFTW
Trigger: CCATGTAAAGTAGTGGATCCATCTTGCTTTTGCCTT...TTCATGTACTATGTATGCATTGGTGGTAAATGGATGTGAGGGCAAGTACATCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
CDS-3UTR CCA 90 bp TCTTGGTACCACATAGCTAAAATGGCAGTTGTATTGATAAACATCTCATGGGCAAAGGCAAAAGCAAGATaGATCCACTACTTTACATGG +
Preference number: 4 (lower is better)
Translates to: SWYHIAKMAVVLINISWAKAKAR*IHYFTW
Trigger: CCATGTAAAGTAGTGGATCCATCTTGCTTTTGCCTT...TGCCCATGAGATGTTTATCAATACAACTGCCATTTTAGCTATGTGGTACCAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
CDS-3UTR CCA 90 bp TTCCATAACTGTAGGCTTTATATAAGGCAAAAGCAAGATGGATCCACTACTTTAGATTCTCTTCGATTTTaGCATACTCTGAGAGCCGAG +
Preference number: 4 (lower is better)
Translates to: FHNCRLYIRQKQDGSTTLDSLRF*HTLRAE
Trigger: CTCGGCTCTCAGAGTATGCCAAAATCGAAGAGAATC...TAAAGTAGTGGATCCATCTTGCTTTTGCCTTATATAAAGCCTACAGTTATGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383710.9
CDS-3UTR CCA 90 bp TCTTGGTACCACATAGCTAAAATGGCAGTTGTATTGATAAACATCTCATGGGCAGTAGATTTGGTACTTTaGGAAGGTTCACATTGGGTA +
Preference number: 4 (lower is better)
Translates to: SWYHIAKMAVVLINISWAVDLVL*EGSHWV
Trigger: TACCCAATGTGAACCTTCCCAAAGTACCAAATCTAC...TGCCCATGAGATGTTTATCAATACAACTGCCATTTTAGCTATGTGGTACCAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383710.9
ENST00000473635.5
CDS-3UTR CCA 90 bp TGTCTTGAGTGTTCACATTCAACAACATTACTAATTCCATCTTTCTCATTCACGCGTCACTTTGCAAGCTaGCACGGATTTACTAAACAG +
Preference number: 4 (lower is better)
Translates to: CLECSHSTTLLIPSFSFTRHFAS*HGFTKQ
Trigger: CTGTTTAGTAAATCCGTGCCAGCTTGCAAAGTGACG...CGTGAATGAGAAAGATGGAATTAGTAATGTTGTTGAATGTGAACACTCAAGACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490353.2
CDS-3UTR TCA 90 bp TTGATGTACTTGCCCTCACATCCATTTACCACCAATGCATACATAGTACATGAACAAAGTTTTGTTGATTaGGCTTTGGCATCAACCATA +
Preference number: 4 (lower is better)
Translates to: LMYLPSHPFTTNAYIVHEQSFVD*ALASTI
Trigger: TATGGTTGATGCCAAAGCTCAATCAACAAAACTTTG...TTCATGTACTATGTATGCATTGGTGGTAAATGGATGTGAGGGCAAGTACATCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
CDS-3UTR TCA 90 bp TCTTGGTACCACATAGCTAAAATGGCAGTTGTATTGATAAACATCTCATGGGCACAAAGTTTTGTTGATTaGGCTTTGGCATCAACCATA +
Preference number: 4 (lower is better)
Translates to: SWYHIAKMAVVLINISWAQSFVD*ALASTI
Trigger: TATGGTTGATGCCAAAGCTCAATCAACAAAACTTTG...TGCCCATGAGATGTTTATCAATACAACTGCCATTTTAGCTATGTGGTACCAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
CDS-3UTR TCA 90 bp AATGTACTTGATGTACTTGCCCTCACATCCATTTACCACCAATGCATACATAGTCAAAGTTTTGTTGATTaGGCTTTGGCATCAACCATA +
Preference number: 4 (lower is better)
Translates to: NVLDVLALTSIYHQCIHSQSFVD*ALASTI
Trigger: TATGGTTGATGCCAAAGCTCAATCAACAAAACTTTG...ACTATGTATGCATTGGTGGTAAATGGATGTGAGGGCAAGTACATCAAGTACATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
CDS-3UTR GCA 90 bp CAGGGAAATACACAGACTATAGTGAAATTATTCAGTAAACAGAGATTGGGTACTCAAACTTGGGAAATTTaGGTTCCCTGGCTATTTGGT +
Preference number: 4 (lower is better)
Translates to: QGNTQTIVKLFSKQRLGTQTWEI*VPWLFG
Trigger: ACCAAATAGCCAGGGAACGCAAATTTCCCAAGTTTG...AGTACCCAATCTCTGTTTACTGAATAATTTCACTATAGTCTGTGTATTTCCCTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490353.2
CDS-3UTR GCA 90 bp TTCCATAACTGTAGGCTTTATATAAGGCAAAAGCAAGATGGATCCACTACTTTACAAACTTGGGAAATTTaGGTTCCCTGGCTATTTGGT +
Preference number: 4 (lower is better)
Translates to: FHNCRLYIRQKQDGSTTLQTWEI*VPWLFG
Trigger: ACCAAATAGCCAGGGAACGCAAATTTCCCAAGTTTG...TAAAGTAGTGGATCCATCTTGCTTTTGCCTTATATAAAGCCTACAGTTATGGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR GCA 90 bp ATTGCTTGTAAACATATAGACATGGACATCAGGAAATCAGTGGATATGAAGGTCCTTGGCCCATTTCCATaGTGCAAAGTTTTGTTGATT +
Preference number: 4 (lower is better)
Translates to: IACKHIDMDIRKSVDMKVLGPFP*CKVLLI
Trigger: AATCAACAAAACTTTGCAGCATGGAAATGGGCCAAG...GACCTTCATATCCACTGATTTCCTGATGTCCATGTCTATATGTTTACAAGCAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
CDS-3UTR GCA 90 bp TTCCATAACTGTAGGCTTTATATAAGGCAAAAGCAAGATGGATCCACTACTTTATCGTTTCATAGGTCTTaGTGTTTAAGGTGGAGTCCA +
Preference number: 4 (lower is better)
Translates to: FHNCRLYIRQKQDGSTTLSFHRS*CLRWSP
Trigger: TGGACTCCACCTTAAACAGCAAGACCTATGAAACGA...TAAAGTAGTGGATCCATCTTGCTTTTGCCTTATATAAAGCCTACAGTTATGGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
CDS-3UTR GCA 90 bp TTCCATAACTGTAGGCTTTATATAAGGCAAAAGCAAGATGGATCCACTACTTTAAACAGACTAAGGACATaGACTGATTACAGGACTCTG +
Preference number: 4 (lower is better)
Translates to: FHNCRLYIRQKQDGSTTLNRLRT*TDYRTL
Trigger: CAGAGTCCTGTAATCAGTGCATGTCCTTAGTCTGTT...TAAAGTAGTGGATCCATCTTGCTTTTGCCTTATATAAAGCCTACAGTTATGGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
CDS-3UTR GCA 90 bp ATTGCTTGTAAACATATAGACATGGACATCAGGAAATCAGTGGATATGAAGGTCACAGTAGTTTTGAACTaGGCGCTTGATGTTAAGTCA +
Preference number: 4 (lower is better)
Translates to: IACKHIDMDIRKSVDMKVTVVLN*ALDVKS
Trigger: TGACTTAACATCAAGCGCGCAGTTCAAAACTACTGT...GACCTTCATATCCACTGATTTCCTGATGTCCATGTCTATATGTTTACAAGCAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
CDS-3UTR CCA 90 bp TTGATGTACTTGCCCTCACATCCATTTACCACCAATGCATACATAGTACATGAATTCAGGTCGACCAAATaGAAAGCAATACCTAAAATG +
Preference number: 4 (lower is better)
Translates to: LMYLPSHPFTTNAYIVHEFRSTK*KAIPKM
Trigger: CATTTTAGGTATTGCTTTCCATTTGGTCGACCTGAA...TTCATGTACTATGTATGCATTGGTGGTAAATGGATGTGAGGGCAAGTACATCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CCA 90 bp TTCCATAACTGTAGGCTTTATATAAGGCAAAAGCAAGATGGATCCACTACTTTAATATCTAACAACAAGTaGGGCAAACAGGTCTTGCAG +
Preference number: 4 (lower is better)
Translates to: FHNCRLYIRQKQDGSTTLISNNK*GKQVLQ
Trigger: CTGCAAGACCTGTTTGCCCCACTTGTTGTTAGATAT...TAAAGTAGTGGATCCATCTTGCTTTTGCCTTATATAAAGCCTACAGTTATGGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CCA 90 bp TTCCATAACTGTAGGCTTTATATAAGGCAAAAGCAAGATGGATCCACTACTTTACATTTTCTTCGATTTTaGCATACTCTGAGAGCCGAG +
Preference number: 4 (lower is better)
Translates to: FHNCRLYIRQKQDGSTTLHFLRF*HTLRAE
Trigger: CTCGGCTCTCAGAGTATGCCAAAATCGAAGAAAATG...TAAAGTAGTGGATCCATCTTGCTTTTGCCTTATATAAAGCCTACAGTTATGGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357948.7
ENST00000612439.4
CDS-3UTR CCA 90 bp CAAACCCCAGGGTTGTGCAGTTACAGATCAAAATGCAATGTACATGACAGATATAGAGAATCAATCCATTaGTATGTAGCCATCCTTTTT +
Preference number: 4 (lower is better)
Translates to: QTPGLCSYRSKCNVHDRYRESIH*YVAILF
Trigger: AAAAAGGATGGCTACATACCAATGGATTGATTCTCT...ATATCTGTCATGTACATTGCATTTTGATCTGTAACTGCACAACCCTGGGGTTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
CDS-3UTR CCA 90 bp ATTGCTTGTAAACATATAGACATGGACATCAGGAAATCAGTGGATATGAAGGTCAAGGCAAAAGCAAGATaGATCCACTACTTTACATGG +
Preference number: 4 (lower is better)
Translates to: IACKHIDMDIRKSVDMKVKAKAR*IHYFTW
Trigger: CCATGTAAAGTAGTGGATCCATCTTGCTTTTGCCTT...GACCTTCATATCCACTGATTTCCTGATGTCCATGTCTATATGTTTACAAGCAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
CDS-3UTR CCA 90 bp ATTGCTTGTAAACATATAGACATGGACATCAGGAAATCAGTGGATATGAAGGTCATTTTAGCAAACTCTTaGCCCATTTCCATGCTGCAA +
Preference number: 4 (lower is better)
Translates to: IACKHIDMDIRKSVDMKVILANS*PISMLQ
Trigger: TTGCAGCATGGAAATGGGCCAAGAGTTTGCTAAAAT...GACCTTCATATCCACTGATTTCCTGATGTCCATGTCTATATGTTTACAAGCAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473635.5
ENST00000613879.4
CDS-3UTR TCA 90 bp ATTGCTTGTAAACATATAGACATGGACATCAGGAAATCAGTGGATATGAAGGTCCAAAGTTTTGTTGATTaGGCTTTGGCATCAACCATA +
Preference number: 4 (lower is better)
Translates to: IACKHIDMDIRKSVDMKVQSFVD*ALASTI
Trigger: TATGGTTGATGCCAAAGCTCAATCAACAAAACTTTG...GACCTTCATATCCACTGATTTCCTGATGTCCATGTCTATATGTTTACAAGCAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
CDS-3UTR TCA 90 bp ATTGCTTGTAAACATATAGACATGGACATCAGGAAATCAGTGGATATGAAGGTCGGAAATCAGTGGATATaGAGGTCATTTGCTAATCTT +
Preference number: 4 (lower is better)
Translates to: IACKHIDMDIRKSVDMKVGNQWI*RSFANL
Trigger: AAGATTAGCAAATGACCTTCATATCCACTGATTTCC...GACCTTCATATCCACTGATTTCCTGATGTCCATGTCTATATGTTTACAAGCAAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
CDS-3UTR GCA 90 bp TCTTGGTACCACATAGCTAAAATGGCAGTTGTATTGATAAACATCTCATGGGCAGATAGTAACGAACTTTaGAACCAAGAGTGTTATCAT +
Preference number: 4 (lower is better)
Translates to: SWYHIAKMAVVLINISWADSNEL*NQECYH
Trigger: ATGATAACACTCTTGGTTGCAAAGTTCGTTACTATC...TGCCCATGAGATGTTTATCAATACAACTGCCATTTTAGCTATGTGGTACCAAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
CDS-3UTR CCA 90 bp ATTGCTTGTAAACATATAGACATGGACATCAGGAAATCAGTGGATATGAAGGTCTTCAGGTCGACCAAATaGAAAGCAATACCTAAAATG +
Preference number: 4 (lower is better)
Translates to: IACKHIDMDIRKSVDMKVFRSTK*KAIPKM
Trigger: CATTTTAGGTATTGCTTTCCATTTGGTCGACCTGAA...GACCTTCATATCCACTGATTTCCTGATGTCCATGTCTATATGTTTACAAGCAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CCA 90 bp TTGATGTACTTGCCCTCACATCCATTTACCACCAATGCATACATAGTACATGAAAGAGAATCAATCCATTaGTATGTAGCCATCCTTTTT +
Preference number: 4 (lower is better)
Translates to: LMYLPSHPFTTNAYIVHERESIH*YVAILF
Trigger: AAAAAGGATGGCTACATACCAATGGATTGATTCTCT...TTCATGTACTATGTATGCATTGGTGGTAAATGGATGTGAGGGCAAGTACATCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
CDS-3UTR CCA 90 bp TTCCATAACTGTAGGCTTTATATAAGGCAAAAGCAAGATGGATCCACTACTTTAAAGGCAAAAGCAAGATaGATCCACTACTTTACATGG +
Preference number: 4 (lower is better)
Translates to: FHNCRLYIRQKQDGSTTLKAKAR*IHYFTW
Trigger: CCATGTAAAGTAGTGGATCCATCTTGCTTTTGCCTT...TAAAGTAGTGGATCCATCTTGCTTTTGCCTTATATAAAGCCTACAGTTATGGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
CDS-3UTR TCA 90 bp TTCCATAACTGTAGGCTTTATATAAGGCAAAAGCAAGATGGATCCACTACTTTACAAAGTTTTGTTGATTaGGCTTTGGCATCAACCATA +
Preference number: 4 (lower is better)
Translates to: FHNCRLYIRQKQDGSTTLQSFVD*ALASTI
Trigger: TATGGTTGATGCCAAAGCTCAATCAACAAAACTTTG...TAAAGTAGTGGATCCATCTTGCTTTTGCCTTATATAAAGCCTACAGTTATGGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
3UTR CAA 72 bp ACACAGACTATAGTGAAATTATTCAGTAAACAGAGATaGGGTACTGTGACTCTTCAAGCACAAATCTTGTAC +
Preference number: 4 (lower is better)
Translates to: TQTIVKLFSKQR*GTVTLQAQILY
Trigger: GTACAAGATTTGTGCTTGAAGAGTCACAGTACCCAATCTCTGTTTACTGAATAATTTCACTATAGTCTGTGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490353.2
3UTR CAA 72 bp TTCCTCTTAGTTTCGTCCGCAAAGCTCTTTTATACCTaGACTCAGCCTATATTTATAGATTTCTTTCTTTTC +
Preference number: 4 (lower is better)
Translates to: FLLVSSAKLFYT*TQPIFIDFFLF
Trigger: GAAAAGAAAGAAATCTATAAATATAGGCTGAGTCAAGGTATAAAAGAGCTTTGCGGACGAAACTAAGAGGAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490353.2
CDS GCA 90 bp TCCCGGGTGGGCGCTTCTCCCCAGGTCAGGGAGCGAGAGCGCTGCTaGTCAGCCTCGGCCGCCGCGACTGATCCTCTGCCCGGCGGTCGC +
Preference number: 5 (lower is better)
Translates to: SRVGASPQVRERERC*SASAAATDPLPGGR
Trigger: GCGACCGCCGGGCAGAGGATCAGTCGCGGCGGCCGAGGCTGAGCAGCAGCGCTCTCGCTCCCTGACCTGGGGAGAAGCGCCCACCCGGGA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS GCA 90 bp CTCTCCCGGGTGGGCGCTTCTCCCCAGGTCAGGGAGCGAGAGCGCTaGTGCTCAGCCTCGGCCGCCGCGACTGATCCTCTGCCCGGCGGT +
Preference number: 5 (lower is better)
Translates to: LSRVGASPQVRERER*CSASAAATDPLPGG
Trigger: ACCGCCGGGCAGAGGATCAGTCGCGGCGGCCGAGGCTGAGCAGCAGCGCTCTCGCTCCCTGACCTGGGGAGAAGCGCCCACCCGGGAGAG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS TCA 90 bp GGTCAGGGAGCGAGAGCGCTGCTGCTCAGCCTCGGCCGCCGCGACTaGTCCTCTGCCCGGCGGTCGCGAGCTGGGCTCAGACCCAGAAGC +
Preference number: 5 (lower is better)
Translates to: GQGARALLLSLGRRD*SSARRSRAGLRPRS
Trigger: GCTTCTGGGTCTGAGCCCAGCTCGCGACCGCCGGGCAGAGGATCAGTCGCGGCGGCCGAGGCTGAGCAGCAGCGCTCTCGCTCCCTGACC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS GCA 90 bp AGCGAGAGCGCTGCTGCTCAGCCTCGGCCGCCGCGACTGATCCTCTaGCCGGCGGTCGCGAGCTGGGCTCAGACCCAGAAGCGCGAAGGG +
Preference number: 5 (lower is better)
Translates to: SESAAAQPRPPRLIL*PAVASWAQTQKREG
Trigger: CCCTTCGCGCTTCTGGGTCTGAGCCCAGCTCGCGACCGCCGGGCAGAGGATCAGTCGCGGCGGCCGAGGCTGAGCAGCAGCGCTCTCGCT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS CCA 90 bp CAGCCTCGGCCGCCGCGACTGATCCTCTGCCCGGCGGTCGCGAGCTaGGCTCAGACCCAGAAGCGCGAAGGGAGGAGGGGAAGGGAGAGG +
Preference number: 5 (lower is better)
Translates to: QPRPPRLILCPAVAS*AQTQKREGRRGRER
Trigger: CCTCTCCCTTCCCCTCCTCCCTTCGCGCTTCTGGGTCTGAGCCCAGCTCGCGACCGCCGGGCAGAGGATCAGTCGCGGCGGCCGAGGCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS GCA 90 bp TGGGAGACAGGCGCGCGCCGGACGGGGCCGAGCCGAGCACCTCCTTaGCGCTCTCCTCCTCCACGATCTCATCCGATTCTTCTTCGCTGG +
Preference number: 5 (lower is better)
Translates to: WETGARRTGPSRAPP*RSPPPRSHPILLRW
Trigger: CCAGCGAAGAAGAATCGGATGAGATCGTGGAGGAGGAGAGCGGCAAGGAGGTGCTCGGCTCGGCCCCGTCCGGCGCGCGCCTGTCTCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000490353.2
ENST00000612439.4
CDS GCA 90 bp AGAGGTGCGTCCGTGGACTCGAGGTGGGCAAGGGGGAGAATCAATTaGGAGCCCCGAGCCCGCAGCCGGATGCCATCTGCGGCTGCTGAA +
Preference number: 5 (lower is better)
Translates to: RGASVDSRWARGRIN*EPRARSRMPSAAAE
Trigger: TTCAGCAGCCGCAGATGGCATCCGGCTGCGGGCTCGGGGCTCGCAATTGATTCTCCCCCTTGCCCACCTCGAGTCCACGGACGCACCTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000383710.9
ENST00000612439.4
CDS TCA 90 bp CTTGGCGTTGAGTTTCTGGACTTGGGTCGGGGGCACAGGCTTGTGTaGCTGCCCCGTGGCCCGATACATGGCCTGGACCCACAGGATGCG +
Preference number: 5 (lower is better)
Translates to: LGVEFLDLGRGHRLV*LPRGPIHGLDPQDA
Trigger: CGCATCCTGTGGGTCCAGGCCATGTATCGGGCCACGGGGCAGTCACACAAGCCTGTGCCCCCGACCCAAGTCCAGAAACTCAACGCCAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000478434.4
ENST00000490424.1
ENST00000542833.1
ENST00000612439.4
CDS TCA 90 bp CAATTGCGAGCCCCGAGCCCGCAGCCGGATGCCATCTGCGGCTGCTaGAGGAGGCGCCTCCAGAAAAGATGCCGAGTGTTGCAAGCTGTC +
Preference number: 5 (lower is better)
Translates to: QLRAPSPQPDAICGC*RRRLQKRCRVLQAV
Trigger: GACAGCTTGCAACACTCGGCATCTTTTCTGGAGGCGCCTCCTTCAGCAGCCGCAGATGGCATCCGGCTGCGGGCTCGGGGCTCGCAATTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383710.9
ENST00000612439.4
CDS GCA 90 bp GCGTTGAGTTTCTGGACTTGGGTCGGGGGCACAGGCTTGTGTGACTaGCCCGTGGCCCGATACATGGCCTGGACCCACAGGATGCGGTCT +
Preference number: 5 (lower is better)
Translates to: ALSFWTWVGGTGLCD*PVARYMAWTHRMRS
Trigger: AGACCGCATCCTGTGGGTCCAGGCCATGTATCGGGCCACGGGGCAGTCACACAAGCCTGTGCCCCCGACCCAAGTCCAGAAACTCAACGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000478434.4
ENST00000490424.1
ENST00000542833.1
ENST00000612439.4
CDS CCA 90 bp GGGTCGGGGGCACAGGCTTGTGTGACTGCCCCGTGGCCCGATACATaGCCTGGACCCACAGGATGCGGTCTTGTTCATCGTCACTGGCAA +
Preference number: 5 (lower is better)
Translates to: GSGAQACVTAPWPDT*PGPTGCGLVHRHWQ
Trigger: TTGCCAGTGACGATGAACAAGACCGCATCCTGTGGGTCCAGGCCATGTATCGGGCCACGGGGCAGTCACACAAGCCTGTGCCCCCGACCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000478434.4
ENST00000490424.1
ENST00000542833.1
ENST00000612439.4
CDS CCA 90 bp GTTTCTGGACTTGGGTCGGGGGCACAGGCTTGTGTGACTGCCCCGTaGCCCGATACATGGCCTGGACCCACAGGATGCGGTCTTGTTCAT +
Preference number: 5 (lower is better)
Translates to: VSGLGSGAQACVTAP*PDTWPGPTGCGLVH
Trigger: ATGAACAAGACCGCATCCTGTGGGTCCAGGCCATGTATCGGGCCACGGGGCAGTCACACAAGCCTGTGCCCCCGACCCAAGTCCAGAAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000478434.4
ENST00000490424.1
ENST00000542833.1
ENST00000612439.4
CDS GCA 90 bp CTGAGGCCGTCAATCTCAGGCAGGCTGCGCACTCTCTTCTCAATGTaGTTCTTGAAGACCTCCCGGGAGTCGTTGGCGGAACAGCCTCCA +
Preference number: 5 (lower is better)
Translates to: LRPSISGRLRTLFSM*FLKTSRESLAEQPP
Trigger: TGGAGGCTGTTCCGCCAACGACTCCCGGGAGGTCTTCAAGAAGCACATTGAGAAGAGAGTGCGCAGCCTGCCTGAGATTGACGGCCTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000490353.2
ENST00000612439.4
CDS GCA 90 bp TCTGCGGCTGCTGAAGGAGGCGCCTCCAGAAAAGATGCCGAGTGTTaGAAGCTGTCGATGCAGCCAAGAGCCGAAGAGGCATCTTGCCGA +
Preference number: 5 (lower is better)
Translates to: SAAAEGGASRKDAEC*KLSMQPRAEEASCR
Trigger: TCGGCAAGATGCCTCTTCGGCTCTTGGCTGCATCGACAGCTTGCAACACTCGGCATCTTTTCTGGAGGCGCCTCCTTCAGCAGCCGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383710.9
CDS CCA 90 bp TCATCCGGGCCTGCTGCTTCCGCGGGTCCTCTTCTCCACGGTAGATaGCATCAAATTTGGCCATCCAGGAGCTCAGCACAGTCTCCTTGC +
Preference number: 5 (lower is better)
Translates to: SSGPAASAGPLLHGR*HQIWPSRSSAQSPC
Trigger: GCAAGGAGACTGTGCTGAGCTCCTGGATGGCCAAATTTGATGCCATCTACCGTGGAGAAGAGGACCCGCGGAAGCAGCAGGCCCGGATGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000490353.2
ENST00000612439.4
CDS-3UTR CAA 90 bp GAAACAGGACACCACTGGAGCCGGGTCACACTGGTTCAGGAGCTCTCTGTCCCCGCTTGCTCATCTGGATaGTCCAGCTGGCAGGCATTG +
Preference number: 5 (lower is better)
Translates to: ETGHHWSRVTLVQELSVPACSSG*SSWQAL
Trigger: CAATGCCTGCCAGCTGGACAATCCAGATGAGCAAGC...GGGGACAGAGAGCTCCTGAACCAGTGTGACCCGGCTCCAGTGGTGTCCTGTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490353.2
CDS TCA 90 bp GCTGTCCTTCATGCTGATGCCCTGCAGTCCCCCACCTTCACTCACTaGTGCTGTGGCTTCCTCCACAGTGAGACGGTTCCGGATCGTTTC +
Preference number: 5 (lower is better)
Translates to: AVLHADALQSPTFTH*CCGFLHSETVPDRF
Trigger: GAAACGATCCGGAACCGTCTCACTGTGGAGGAAGCCACAGCATCAGTGAGTGAAGGTGGGGGACTGCAGGGCATCAGCATGAAGGACAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000474560.1
ENST00000486172.1
ENST00000612439.4
ENST00000613879.4
CDS-3UTR CAA 90 bp AGGACACCACTGGAGCCGGGTCACACTGGTTCAGGAGCTCTCTGTCCCCAGTGTACCCCTGGAGATGATTaGACATGGCACAAAGACGGG +
Preference number: 5 (lower is better)
Translates to: RTPLEPGHTGSGALCPQCTPGDD*TWHKDG
Trigger: CCCGTCTTTGTGCCATGTCAAATCATCTCCAGGGGT...ACACTGGGGACAGAGAGCTCCTGAACCAGTGTGACCCGGCTCCAGTGGTGTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490353.2
CDS GCA 90 bp AGCCCAGCCGCAACAGAGACCACACTACCCCAATCGAGGCAGCACTaGAGCCTCACAGCCAGCTTCTGCTCTTTTAAAGATCATGGAGGC +
Preference number: 5 (lower is better)
Translates to: SPAATETTLPQSRQH*SLTASFCSFKDHGG
Trigger: GCCTCCATGATCTTTAAAAGAGCAGAAGCTGGCTGTGAGGCTGCAGTGCTGCCTCGATTGGGGTAGTGTGGTCTCTGTTGCGGCTGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486172.1
CDS GCA 90 bp TCGTCTTCTTCGTCTTCCTCATCGCTGTCCTTCATGCTGATGCCCTaGAGTCCCCCACCTTCACTCACTGATGCTGTGGCTTCCTCCACA +
Preference number: 5 (lower is better)
Translates to: SSSSSSSSLSFMLMP*SPPPSLTDAVASST
Trigger: TGTGGAGGAAGCCACAGCATCAGTGAGTGAAGGTGGGGGACTGCAGGGCATCAGCATGAAGGACAGCGATGAGGAAGACGAAGAAGACGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000474560.1
ENST00000486172.1
ENST00000612439.4
ENST00000613879.4
CDS GCA 90 bp AGAGAGCTATCATTTTTCCTTATGCCTGACGGTGAGGGAGGAGGCTaGCCAACTGCAACACCAGACATGCAGACTCACCAACCGCTGGGG +
Preference number: 5 (lower is better)
Translates to: RELSFFLMPDGEGGG*PTATPDMQTHQPLG
Trigger: CCCCAGCGGTTGGTGAGTCTGCATGTCTGGTGTTGCAGTTGGGCAGCCTCCTCCCTCACCGTCAGGCATAAGGAAAAATGATAGCTCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474560.1
CDS CCA 90 bp TCATTTCTAGGCTCCTTCCTCATCAGAGCCAATTGTGGCTCTCCTTaGAGCCCAGCCGCAACAGAGACCACACTACCCCAATCGAGGCAG +
Preference number: 5 (lower is better)
Translates to: SFLGSFLIRANCGSP*SPAATETTLPQSRQ
Trigger: CTGCCTCGATTGGGGTAGTGTGGTCTCTGTTGCGGCTGGGCTCCAAGGAGAGCCACAATTGGCTCTGATGAGGAAGGAGCCTAGAAATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486172.1
CDS-3UTR CAA 90 bp ATCGCCCCCTTGCCGTGGCAATTAAGAGAATCAATCCATTGGTATGTAGCCATCACCTCCCGGGAGTCGTaGGCGGAACAGCCTCCACTC +
Preference number: 5 (lower is better)
Translates to: IAPLPWQLRESIHWYVAITSRES*AEQPPL
Trigger: GAGTGGAGGCTGTTCCGCCAACGACTCCCGGGAGGT...GATGGCTACATACCAATGGATTGATTCTCTTAATTGCCACGGCAAGGGGGCGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CAA 90 bp AGTCATGATAGGATCGCCCCCTTGCCGTGGCAATTAAGAGAATCAATCCATTGGACCTCCCGGGAGTCGTaGGCGGAACAGCCTCCACTC +
Preference number: 5 (lower is better)
Translates to: SHDRIAPLPWQLRESIHWTSRES*AEQPPL
Trigger: GAGTGGAGGCTGTTCCGCCAACGACTCCCGGGAGGT...CCAATGGATTGATTCTCTTAATTGCCACGGCAAGGGGGCGATCCTATCATGACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CAA 90 bp GAAAGAAATAGCTCTGCAGCAAACCCCAGGGTTGTGCAGTTACAGATCAAAATGGTCGGGGGCACAGGCTaGTGTGACTGCCCCGTGGCC +
Preference number: 5 (lower is better)
Translates to: ERNSSAANPRVVQLQIKMVGGTG*CDCPVA
Trigger: GGCCACGGGGCAGTCACACAAGCCTGTGCCCCCGAC...CATTTTGATCTGTAACTGCACAACCCTGGGGTTTGCTGCAGAGCTATTTCTTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS TCA 90 bp TGGCATCAAATTTGGCCATCCAGGAGCTCAGCACAGTCTCCTTGCTaGGGCCGTCAATCTCAGGCAGGCTGCGCACTCTCTTCTCAATGT +
Preference number: 5 (lower is better)
Translates to: WHQIWPSRSSAQSPC*GRQSQAGCALSSQC
Trigger: ACATTGAGAAGAGAGTGCGCAGCCTGCCTGAGATTGACGGCCTCAGCAAGGAGACTGTGCTGAGCTCCTGGATGGCCAAATTTGATGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000490353.2
ENST00000612439.4
CDS GCA 90 bp GCTGCATCCATGTCTACTGCAAAGAGTGACAGGAACGTCTCCGCATaGTCCACCATTAAATCTGACCACCACGCAAAGGCCTCTGCGTGG +
Preference number: 5 (lower is better)
Translates to: AASMSTAKSDRNVSA*STIKSDHHAKASAW
Trigger: CCACGCAGAGGCCTTTGCGTGGTGGTCAGATTTAATGGTGGAGCATGCGGAGACGTTCCTGTCACTCTTTGCAGTAGACATGGATGCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000478570.5
ENST00000612439.4
CDS CCA 90 bp TCGCCCATGTCGATGATGGAAGCATTGTGGCTGCGTTTGAGTTTCTaGAGCTTGAACTCCCCGCCTTTGGATACCGGCATGCTCTCCAAG +
Preference number: 5 (lower is better)
Translates to: SPMSMMEALWLRLSF*SLNSPPLDTGMLSK
Trigger: CTTGGAGAGCATGCCGGTATCCAAAGGCGGGGAGTTCAAGCTCCAGAAACTCAAACGCAGCCACAATGCTTCCATCATCGACATGGGCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000490353.2
ENST00000612439.4
CDS CCA 90 bp ACTTGTACCCTCTACTTGCCCTCACACACCCTGAGATGCTTCTGCTaGATCAGCTTTGTAGGCATGGGATTGCTGTCCACAGCCTGGGCT +
Preference number: 5 (lower is better)
Translates to: TCTLYLPSHTLRCFC*ISFVGMGLLSTAWA
Trigger: AGCCCAGGCTGTGGACAGCAATCCCATGCCTACAAAGCTGATCCAGCAGAAGCATCTCAGGGTGTGTGAGGGCAAGTAGAGGGTACAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474560.1
CDS GCA 90 bp TTCACTTGTACCCTCTACTTGCCCTCACACACCCTGAGATGCTTCTaGTGGATCAGCTTTGTAGGCATGGGATTGCTGTCCACAGCCTGG +
Preference number: 5 (lower is better)
Translates to: FTCTLYLPSHTLRCF*WISFVGMGLLSTAW
Trigger: CCAGGCTGTGGACAGCAATCCCATGCCTACAAAGCTGATCCAGCAGAAGCATCTCAGGGTGTGTGAGGGCAAGTAGAGGGTACAAGTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474560.1
CDS GCA 90 bp GCTGCATCCATGTCTACTGCAAAGAGTGACAGGAACGTCTCCGCATaGTCCACCATTAAATCTGACCACCACGCAAAGGCCTCTTTCCCC +
Preference number: 5 (lower is better)
Translates to: AASMSTAKSDRNVSA*STIKSDHHAKASFP
Trigger: GGGGAAAGAGGCCTTTGCGTGGTGGTCAGATTTAATGGTGGAGCATGCGGAGACGTTCCTGTCACTCTTTGCAGTAGACATGGATGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491424.5
CDS CCA 90 bp AGCTGGTTCTCACTCTCCTCGCCCATGTCGATGATGGAAGCATTGTaGCTGCGTTTGAGTTTCTGGAGCTTGAACTCCCCGCCTTTGGAT +
Preference number: 5 (lower is better)
Translates to: SWFSLSSPMSMMEAL*LRLSFWSLNSPPLD
Trigger: ATCCAAAGGCGGGGAGTTCAAGCTCCAGAAACTCAAACGCAGCCACAATGCTTCCATCATCGACATGGGCGAGGAGAGTGAGAACCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000490353.2
ENST00000612439.4
CDS-3UTR CAA 90 bp GTTGGCGGATACCACTTCGTTTTGCTGGAATGCCCTTGCCACCCTTTCTGTACTGGCATGCTCTCCAAGTaGGCCATGAGCAGGTTGACA +
Preference number: 5 (lower is better)
Translates to: VGGYHFVLLECPCHPFCTGMLSK*AMSRLT
Trigger: TGTCAACCTGCTCATGGCCAACTTGGAGAGCATGCC...AGTACAGAAAGGGTGGCAAGGGCATTCCAGCAAAACGAAGTGGTATCCGCCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490353.2
CDS-3UTR CAA 90 bp AGTCATGATAGGATCGCCCCCTTGCCGTGGCAATTAAGAGAATCAATCCATTGGTGCCACTCTGACTGTTaGGGGCTGTTCGGGGTGGGA +
Preference number: 5 (lower is better)
Translates to: SHDRIAPLPWQLRESIHWCHSDC*GLFGVG
Trigger: TCCCACCCCGAACAGCCCCAAACAGTCAGAGTGGCA...CCAATGGATTGATTCTCTTAATTGCCACGGCAAGGGGGCGATCCTATCATGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CAA 90 bp GTTCACATGAATGGAGAGGCACAGAAACAGGACACCACTGGAGCCGGGTCACACGGCACTGTGAGGCAGTaGTTCTCTTCTGTTTCTCCT +
Preference number: 5 (lower is better)
Translates to: VHMNGEAQKQDTTGAGSHGTVRQ*FSSVSP
Trigger: AGGAGAAACAGAAGAGAACAACTGCCTCACAGTGCC...GTGTGACCCGGCTCCAGTGGTGTCCTGTTTCTGTGCCTCTCCATTCATGTGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490353.2
CDS-3UTR CAA 90 bp CTGTACTTGCAAATGCTTTCTAGCCAAATTCAAGGGCCATTTTCAAGAGCCATCACCTCCCGGGAGTCGTaGGCGGAACAGCCTCCACTC +
Preference number: 5 (lower is better)
Translates to: LYLQMLSSQIQGPFSRAITSRES*AEQPPL
Trigger: GAGTGGAGGCTGTTCCGCCAACGACTCCCGGGAGGT...GATGGCTCTTGAAAATGGCCCTTGAATTTGGCTAGAAAGCATTTGCAAGTACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490353.2
CDS-3UTR CAA 90 bp TTGATGTACTTGCCCTCACATCCATTTACCACCAATGCATACATAGTACATGAAGTCGGGGGCACAGGCTaGTGTGACTGCCCCGTGGCC +
Preference number: 5 (lower is better)
Translates to: LMYLPSHPFTTNAYIVHEVGGTG*CDCPVA
Trigger: GGCCACGGGGCAGTCACACAAGCCTGTGCCCCCGAC...TTCATGTACTATGTATGCATTGGTGGTAAATGGATGTGAGGGCAAGTACATCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CAA 90 bp AGTCATGATAGGATCGCCCCCTTGCCGTGGCAATTAAGAGAATCAATCCATTGGGTTGAGTTTCTGGACTaGGGTCGGGGGCACAGGCTT +
Preference number: 5 (lower is better)
Translates to: SHDRIAPLPWQLRESIHWVEFLD*GRGHRL
Trigger: AAGCCTGTGCCCCCGACCCAAGTCCAGAAACTCAAC...CCAATGGATTGATTCTCTTAATTGCCACGGCAAGGGGGCGATCCTATCATGACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CAA 90 bp GATACCACTTCGTTTTGCTGGAATGCCCTTGCCACCCTTTCTGTACTTGCAAATTTGAACTCCCCGCCTTaGGATACCGGCATGCTCTCC +
Preference number: 5 (lower is better)
Translates to: DTTSFCWNALATLSVLANLNSPP*DTGMLS
Trigger: GGAGAGCATGCCGGTATCCAAAGGCGGGGAGTTCAA...ATTTGCAAGTACAGAAAGGGTGGCAAGGGCATTCCAGCAAAACGAAGTGGTATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490353.2
CDS-3UTR CAA 90 bp ACGTTCCCTACACAGTACAGCACTTCTGAGACTATAGGTGTTGGCGGATACCACAGCACGACATCTGACTaGGAGAGCTGGTTCTCACTC +
Preference number: 5 (lower is better)
Translates to: TFPTQYSTSETIGVGGYHSTTSD*ESWFSL
Trigger: GAGTGAGAACCAGCTCTCCAAGTCAGATGTCGTGCT...GTGGTATCCGCCAACACCTATAGTCTCAGAAGTGCTGTACTGTGTAGGGAACGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490353.2
CDS-3UTR CAA 90 bp ATGGGTTTAACTAACAGACTAAGGACATGCACTGATTACAGGACTCTGTCCCAGCTGGCAGTGCATGGGTaGTGGAGAAGTCACCCTGGG +
Preference number: 5 (lower is better)
Translates to: MGLTNRLRTCTDYRTLSQLAVHG*WRSHPG
Trigger: CCCAGGGTGACTTCTCCACAACCCATGCACTGCCAG...CTGGGACAGAGTCCTGTAATCAGTGCATGTCCTTAGTCTGTTAGTTAAACCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CAA 90 bp ATGGGTTTAACTAACAGACTAAGGACATGCACTGATTACAGGACTCTGTCCCAGTGCCACTCTGACTGTTaGGGGCTGTTCGGGGTGGGA +
Preference number: 5 (lower is better)
Translates to: MGLTNRLRTCTDYRTLSQCHSDC*GLFGVG
Trigger: TCCCACCCCGAACAGCCCCAAACAGTCAGAGTGGCA...CTGGGACAGAGTCCTGTAATCAGTGCATGTCCTTAGTCTGTTAGTTAAACCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CAA 90 bp ATTGCTTGTAAACATATAGACATGGACATCAGGAAATCAGTGGATATGAAGGTCGTCGGGGGCACAGGCTaGTGTGACTGCCCCGTGGCC +
Preference number: 5 (lower is better)
Translates to: IACKHIDMDIRKSVDMKVVGGTG*CDCPVA
Trigger: GGCCACGGGGCAGTCACACAAGCCTGTGCCCCCGAC...GACCTTCATATCCACTGATTTCCTGATGTCCATGTCTATATGTTTACAAGCAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS GCA 90 bp GCTGCATCCATGTCTACTGCAAAGAGTGACAGGAACGTCTCCGCATaGTCCACCATTAAATCTGACCACCACGCAAAGGCTTCTCCTTTA +
Preference number: 5 (lower is better)
Translates to: AASMSTAKSDRNVSA*STIKSDHHAKASPL
Trigger: TAAAGGAGAAGCCTTTGCGTGGTGGTCAGATTTAATGGTGGAGCATGCGGAGACGTTCCTGTCACTCTTTGCAGTAGACATGGATGCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383710.9
CDS-3UTR CAA 90 bp TTGATGTACTTGCCCTCACATCCATTTACCACCAATGCATACATAGTACATGAATCTGGAGCCCCCGGCTaGGAGTGCAAAAGGTGGGGG +
Preference number: 5 (lower is better)
Translates to: LMYLPSHPFTTNAYIVHESGAPG*ECKRWG
Trigger: CCCCCACCTTTTGCACTCCAAGCCGGGGGCTCCAGA...TTCATGTACTATGTATGCATTGGTGGTAAATGGATGTGAGGGCAAGTACATCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CAA 90 bp AATGTACTTGATGTACTTGCCCTCACATCCATTTACCACCAATGCATACATAGTTCTGGAGCCCCCGGCTaGGAGTGCAAAAGGTGGGGG +
Preference number: 5 (lower is better)
Translates to: NVLDVLALTSIYHQCIHSSGAPG*ECKRWG
Trigger: CCCCCACCTTTTGCACTCCAAGCCGGGGGCTCCAGA...ACTATGTATGCATTGGTGGTAAATGGATGTGAGGGCAAGTACATCAAGTACATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CAA 90 bp AGTCATGATAGGATCGCCCCCTTGCCGTGGCAATTAAGAGAATCAATCCATTGGTTCTCAATGTGCTTCTaGAAGACCTCCCGGGAGTCG +
Preference number: 5 (lower is better)
Translates to: SHDRIAPLPWQLRESIHWFSMCF*KTSRES
Trigger: CGACTCCCGGGAGGTCTTCAAGAAGCACATTGAGAA...CCAATGGATTGATTCTCTTAATTGCCACGGCAAGGGGGCGATCCTATCATGACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CAA 90 bp TTGGCGGATACCACTTCGTTTTGCTGGAATGCCCTTGCCACCCTTTCTGTACTTGCATTGTGGCTGCGTTaGAGTTTCTGGAGCTTGAAC +
Preference number: 5 (lower is better)
Translates to: LADTTSFCWNALATLSVLALWLR*SFWSLN
Trigger: GTTCAAGCTCCAGAAACTCAAACGCAGCCACAATGC...AAGTACAGAAAGGGTGGCAAGGGCATTCCAGCAAAACGAAGTGGTATCCGCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490353.2
CDS-3UTR CAA 90 bp ATCGCCCCCTTGCCGTGGCAATTAAGAGAATCAATCCATTGGTATGTAGCCATCAGCACGACATCTGACTaGGAGAGCTGGTTCTCACTC +
Preference number: 5 (lower is better)
Translates to: IAPLPWQLRESIHWYVAISTTSD*ESWFSL
Trigger: GAGTGAGAACCAGCTCTCCAAGTCAGATGTCGTGCT...GATGGCTACATACCAATGGATTGATTCTCTTAATTGCCACGGCAAGGGGGCGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CAA 90 bp GTTGGCGGATACCACTTCGTTTTGCTGGAATGCCCTTGCCACCCTTTCTGTACTCTCCTTCCACCTCCATaGTGCAATATACGATGCGAT +
Preference number: 5 (lower is better)
Translates to: VGGYHFVLLECPCHPFCTLLPPP*CNIRCD
Trigger: ATCGCATCGTATATTGCACAATGGAGGTGGAAGGAG...AGTACAGAAAGGGTGGCAAGGGCATTCCAGCAAAACGAAGTGGTATCCGCCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490353.2
CDS-3UTR CAA 90 bp AATGTACTTGATGTACTTGCCCTCACATCCATTTACCACCAATGCATACATAGTACCCGCCCAAGCTCCTaGTCCTCCAACGCCAGGACG +
Preference number: 5 (lower is better)
Translates to: NVLDVLALTSIYHQCIHSTRPSS*SSNART
Trigger: CGTCCTGGCGTTGGAGGACAAGGAGCTTGGGCGGGT...ACTATGTATGCATTGGTGGTAAATGGATGTGAGGGCAAGTACATCAAGTACATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CAA 90 bp TTGATGTACTTGCCCTCACATCCATTTACCACCAATGCATACATAGTACATGAAACCCGCCCAAGCTCCTaGTCCTCCAACGCCAGGACG +
Preference number: 5 (lower is better)
Translates to: LMYLPSHPFTTNAYIVHETRPSS*SSNART
Trigger: CGTCCTGGCGTTGGAGGACAAGGAGCTTGGGCGGGT...TTCATGTACTATGTATGCATTGGTGGTAAATGGATGTGAGGGCAAGTACATCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CAA 90 bp ATGGGTTTAACTAACAGACTAAGGACATGCACTGATTACAGGACTCTGTCCCAGGTTGAGTTTCTGGACTaGGGTCGGGGGCACAGGCTT +
Preference number: 5 (lower is better)
Translates to: MGLTNRLRTCTDYRTLSQVEFLD*GRGHRL
Trigger: AAGCCTGTGCCCCCGACCCAAGTCCAGAAACTCAAC...CTGGGACAGAGTCCTGTAATCAGTGCATGTCCTTAGTCTGTTAGTTAAACCCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CAA 90 bp AGTCATGATAGGATCGCCCCCTTGCCGTGGCAATTAAGAGAATCAATCCATTGGGTGCCTGACCCATTATaGACTGGTTCCCATGACTCC +
Preference number: 5 (lower is better)
Translates to: SHDRIAPLPWQLRESIHWVPDPL*TGSHDS
Trigger: GGAGTCATGGGAACCAGTCAATAATGGGTCAGGCAC...CCAATGGATTGATTCTCTTAATTGCCACGGCAAGGGGGCGATCCTATCATGACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357948.7
ENST00000612439.4
CDS-3UTR CAA 90 bp AGTCATGATAGGATCGCCCCCTTGCCGTGGCAATTAAGAGAATCAATCCATTGGGGAGTCCAGGACCCCTaGCAATCGGAAATCTCTGTA +
Preference number: 5 (lower is better)
Translates to: SHDRIAPLPWQLRESIHWGVQDP*QSEISV
Trigger: TACAGAGATTTCCGATTGCAAGGGGTCCTGGACTCC...CCAATGGATTGATTCTCTTAATTGCCACGGCAAGGGGGCGATCCTATCATGACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
CDS-3UTR CAA 90 bp AGTCATGATAGGATCGCCCCCTTGCCGTGGCAATTAAGAGAATCAATCCATTGGGATAGGATCGCCCCCTaGCCGTGGCAATTAAGAGAA +
Preference number: 5 (lower is better)
Translates to: SHDRIAPLPWQLRESIHWDRIAP*PWQLRE
Trigger: TTCTCTTAATTGCCACGGCAAGGGGGCGATCCTATC...CCAATGGATTGATTCTCTTAATTGCCACGGCAAGGGGGCGATCCTATCATGACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
CDS-3UTR CAA 90 bp ATCGCCCCCTTGCCGTGGCAATTAAGAGAATCAATCCATTGGTATGTAGCCATCGATAGGATCGCCCCCTaGCCGTGGCAATTAAGAGAA +
Preference number: 5 (lower is better)
Translates to: IAPLPWQLRESIHWYVAIDRIAP*PWQLRE
Trigger: TTCTCTTAATTGCCACGGCAAGGGGGCGATCCTATC...GATGGCTACATACCAATGGATTGATTCTCTTAATTGCCACGGCAAGGGGGCGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
CDS-3UTR CAA 90 bp AGTCATGATAGGATCGCCCCCTTGCCGTGGCAATTAAGAGAATCAATCCATTGGAAAAGATGCCGAGTGTaGCAAGCTGTCGATGCAGCC +
Preference number: 5 (lower is better)
Translates to: SHDRIAPLPWQLRESIHWKRCRV*QAVDAA
Trigger: GGCTGCATCGACAGCTTGCAACACTCGGCATCTTTT...CCAATGGATTGATTCTCTTAATTGCCACGGCAAGGGGGCGATCCTATCATGACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CAA 90 bp CACAGAAACAGGACACCACTGGAGCCGGGTCACACTGGTTCAGGAGCTCTCTGTTTCAGTAAACAGAGATaGGGTACTGTGACTCTTCAA +
Preference number: 5 (lower is better)
Translates to: HRNRTPLEPGHTGSGALCFSKQR*GTVTLQ
Trigger: TTGAAGAGTCACAGTACCCAATCTCTGTTTACTGAA...ACAGAGAGCTCCTGAACCAGTGTGACCCGGCTCCAGTGGTGTCCTGTTTCTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490353.2
CDS TCA 90 bp TGGGGAGGGTGTGCAGAACCTGTCCAGCCACCTATACTTACCTTTTaGCACAAGATTCGATCATGTCACTTGCCATCAACTTCAGCCGTT +
Preference number: 5 (lower is better)
Translates to: WGGCAEPVQPPILTF*HKIRSCHLPSTSAV
Trigger: AACGGCTGAAGTTGATGGCAAGTGACATGATCGAATCTTGTGTCAAAAGGTAAGTATAGGTGGCTGGACAGGTTCTGCACACCCTCCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463002.2
CDS-3UTR CAA 90 bp ATTGCTTGTAAACATATAGACATGGACATCAGGAAATCAGTGGATATGAAGGTCACCTCCCGGGAGTCGTaGGCGGAACAGCCTCCACTC +
Preference number: 5 (lower is better)
Translates to: IACKHIDMDIRKSVDMKVTSRES*AEQPPL
Trigger: GAGTGGAGGCTGTTCCGCCAACGACTCCCGGGAGGT...GACCTTCATATCCACTGATTTCCTGATGTCCATGTCTATATGTTTACAAGCAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CAA 90 bp GATACCACTTCGTTTTGCTGGAATGCCCTTGCCACCCTTTCTGTACTTGCAAATTTCTCAATGTGCTTCTaGAAGACCTCCCGGGAGTCG +
Preference number: 5 (lower is better)
Translates to: DTTSFCWNALATLSVLANFSMCF*KTSRES
Trigger: CGACTCCCGGGAGGTCTTCAAGAAGCACATTGAGAA...ATTTGCAAGTACAGAAAGGGTGGCAAGGGCATTCCAGCAAAACGAAGTGGTATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490353.2
CDS-3UTR CAA 90 bp GAAAGAAATAGCTCTGCAGCAAACCCCAGGGTTGTGCAGTTACAGATCAAAATGGCTTGCTCATCTGGATaGTCCAGCTGGCAGGCATTG +
Preference number: 5 (lower is better)
Translates to: ERNSSAANPRVVQLQIKMACSSG*SSWQAL
Trigger: CAATGCCTGCCAGCTGGACAATCCAGATGAGCAAGC...CATTTTGATCTGTAACTGCACAACCCTGGGGTTTGCTGCAGAGCTATTTCTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CAA 90 bp ATGGGTTTAACTAACAGACTAAGGACATGCACTGATTACAGGACTCTGTCCCAGGGCATGCTCTCCAAGTaGGCCATGAGCAGGTTGACA +
Preference number: 5 (lower is better)
Translates to: MGLTNRLRTCTDYRTLSQGMLSK*AMSRLT
Trigger: TGTCAACCTGCTCATGGCCAACTTGGAGAGCATGCC...CTGGGACAGAGTCCTGTAATCAGTGCATGTCCTTAGTCTGTTAGTTAAACCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CAA 90 bp AGTCATGATAGGATCGCCCCCTTGCCGTGGCAATTAAGAGAATCAATCCATTGGTTGAGTTTCTGGAGCTaGAACTCCCCGCCTTTGGAT +
Preference number: 5 (lower is better)
Translates to: SHDRIAPLPWQLRESIHWLSFWS*NSPPLD
Trigger: ATCCAAAGGCGGGGAGTTCAAGCTCCAGAAACTCAA...CCAATGGATTGATTCTCTTAATTGCCACGGCAAGGGGGCGATCCTATCATGACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CAA 90 bp AGTCATGATAGGATCGCCCCCTTGCCGTGGCAATTAAGAGAATCAATCCATTGGGCATTGTGGCTGCGTTaGAGTTTCTGGAGCTTGAAC +
Preference number: 5 (lower is better)
Translates to: SHDRIAPLPWQLRESIHWALWLR*SFWSLN
Trigger: GTTCAAGCTCCAGAAACTCAAACGCAGCCACAATGC...CCAATGGATTGATTCTCTTAATTGCCACGGCAAGGGGGCGATCCTATCATGACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CAA 90 bp TTGGCGGATACCACTTCGTTTTGCTGGAATGCCCTTGCCACCCTTTCTGTACTTTCGATGATGGAAGCATaGTGGCTGCGTTTGAGTTTC +
Preference number: 5 (lower is better)
Translates to: LADTTSFCWNALATLSVLSMMEA*WLRLSF
Trigger: GAAACTCAAACGCAGCCACAATGCTTCCATCATCGA...AAGTACAGAAAGGGTGGCAAGGGCATTCCAGCAAAACGAAGTGGTATCCGCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490353.2
CDS-3UTR CAA 90 bp ATTGCTTGTAAACATATAGACATGGACATCAGGAAATCAGTGGATATGAAGGTCACCCGCCCAAGCTCCTaGTCCTCCAACGCCAGGACG +
Preference number: 5 (lower is better)
Translates to: IACKHIDMDIRKSVDMKVTRPSS*SSNART
Trigger: CGTCCTGGCGTTGGAGGACAAGGAGCTTGGGCGGGT...GACCTTCATATCCACTGATTTCCTGATGTCCATGTCTATATGTTTACAAGCAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CAA 90 bp CAAACCCCAGGGTTGTGCAGTTACAGATCAAAATGCAATGTACATGACAGATATCCCTCCTTGACAGCATaGAAGAAGGCTCGGCCACCC +
Preference number: 5 (lower is better)
Translates to: QTPGLCSYRSKCNVHDRYPSLTA*KKARPP
Trigger: GGGTGGCCGAGCCTTCTTCAATGCTGTCAAGGAGGG...ATATCTGTCATGTACATTGCATTTTGATCTGTAACTGCACAACCCTGGGGTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CAA 90 bp ACGTTCCCTACACAGTACAGCACTTCTGAGACTATAGGTGTTGGCGGATACCACCTCATTCACGTCACTTaGCAAGCTGGCACGGATTTA +
Preference number: 5 (lower is better)
Translates to: TFPTQYSTSETIGVGGYHLIHVT*QAGTDL
Trigger: TAAATCCGTGCCAGCTTGCAAAGTGACGTGAATGAG...GTGGTATCCGCCAACACCTATAGTCTCAGAAGTGCTGTACTGTGTAGGGAACGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490353.2
CDS GCA 90 bp GCAAGAAACGACACAGTCTCAGCCATGGCGTACAGAAGCCCTCTTTaGAATCTTTCATTTCTAGGCTCCTTCCTCATCAGAGCCAATTGT +
Preference number: 5 (lower is better)
Translates to: ARNDTVSAMAYRSPL*NLSFLGSFLIRANC
Trigger: ACAATTGGCTCTGATGAGGAAGGAGCCTAGAAATGAAAGATTGCAAAGAGGGCTTCTGTACGCCATGGCTGAGACTGTGTCGTTTCTTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486172.1
CDS CCA 90 bp TTCTATTTCTCCCCTGGTGATGCTTGTGGCAATATGGCCTTTTCCTaGGCGCATGCAACCATCTTAGAGCTAAGGTACAAAGTCAAGTGC +
Preference number: 5 (lower is better)
Translates to: FYFSPGDACGNMAFS*AHATILELRYKVKC
Trigger: GCACTTGACTTTGTACCTTAGCTCTAAGATGGTTGCATGCGCCCAGGAAAAGGCCATATTGCCACAAGCATCACCAGGGGAGAAATAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474560.1
CDS-3UTR CAA 90 bp TTCCATAACTGTAGGCTTTATATAAGGCAAAAGCAAGATGGATCCACTACTTTATCTGGAGCCCCCGGCTaGGAGTGCAAAAGGTGGGGG +
Preference number: 5 (lower is better)
Translates to: FHNCRLYIRQKQDGSTTLSGAPG*ECKRWG
Trigger: CCCCCACCTTTTGCACTCCAAGCCGGGGGCTCCAGA...TAAAGTAGTGGATCCATCTTGCTTTTGCCTTATATAAAGCCTACAGTTATGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CAA 90 bp ATGGGTTTAACTAACAGACTAAGGACATGCACTGATTACAGGACTCTGTCCCAGTTCTCAATGTGCTTCTaGAAGACCTCCCGGGAGTCG +
Preference number: 5 (lower is better)
Translates to: MGLTNRLRTCTDYRTLSQFSMCF*KTSRES
Trigger: CGACTCCCGGGAGGTCTTCAAGAAGCACATTGAGAA...CTGGGACAGAGTCCTGTAATCAGTGCATGTCCTTAGTCTGTTAGTTAAACCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CAA 90 bp AGTCATGATAGGATCGCCCCCTTGCCGTGGCAATTAAGAGAATCAATCCATTGGTCGATGATGGAAGCATaGTGGCTGCGTTTGAGTTTC +
Preference number: 5 (lower is better)
Translates to: SHDRIAPLPWQLRESIHWSMMEA*WLRLSF
Trigger: GAAACTCAAACGCAGCCACAATGCTTCCATCATCGA...CCAATGGATTGATTCTCTTAATTGCCACGGCAAGGGGGCGATCCTATCATGACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CAA 90 bp ATCGCCCCCTTGCCGTGGCAATTAAGAGAATCAATCCATTGGTATGTAGCCATCCTCCTTCCACCTCCATaGTGCAATATACGATGCGAT +
Preference number: 5 (lower is better)
Translates to: IAPLPWQLRESIHWYVAILLPPP*CNIRCD
Trigger: ATCGCATCGTATATTGCACAATGGAGGTGGAAGGAG...GATGGCTACATACCAATGGATTGATTCTCTTAATTGCCACGGCAAGGGGGCGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CAA 90 bp TCTTGGTACCACATAGCTAAAATGGCAGTTGTATTGATAAACATCTCATGGGCACTGGCAGTGCATGGGTaGTGGAGAAGTCACCCTGGG +
Preference number: 5 (lower is better)
Translates to: SWYHIAKMAVVLINISWALAVHG*WRSHPG
Trigger: CCCAGGGTGACTTCTCCACAACCCATGCACTGCCAG...TGCCCATGAGATGTTTATCAATACAACTGCCATTTTAGCTATGTGGTACCAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CAA 90 bp TTGATGTACTTGCCCTCACATCCATTTACCACCAATGCATACATAGTACATGAACTGGCAGTGCATGGGTaGTGGAGAAGTCACCCTGGG +
Preference number: 5 (lower is better)
Translates to: LMYLPSHPFTTNAYIVHELAVHG*WRSHPG
Trigger: CCCAGGGTGACTTCTCCACAACCCATGCACTGCCAG...TTCATGTACTATGTATGCATTGGTGGTAAATGGATGTGAGGGCAAGTACATCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CAA 90 bp TTCCATAACTGTAGGCTTTATATAAGGCAAAAGCAAGATGGATCCACTACTTTAACCCGCCCAAGCTCCTaGTCCTCCAACGCCAGGACG +
Preference number: 5 (lower is better)
Translates to: FHNCRLYIRQKQDGSTTLTRPSS*SSNART
Trigger: CGTCCTGGCGTTGGAGGACAAGGAGCTTGGGCGGGT...TAAAGTAGTGGATCCATCTTGCTTTTGCCTTATATAAAGCCTACAGTTATGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CAA 90 bp AATGTACTTGATGTACTTGCCCTCACATCCATTTACCACCAATGCATACATAGTTGCCACTCTGACTGTTaGGGGCTGTTCGGGGTGGGA +
Preference number: 5 (lower is better)
Translates to: NVLDVLALTSIYHQCIHSCHSDC*GLFGVG
Trigger: TCCCACCCCGAACAGCCCCAAACAGTCAGAGTGGCA...ACTATGTATGCATTGGTGGTAAATGGATGTGAGGGCAAGTACATCAAGTACATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CAA 90 bp TCTTGGTACCACATAGCTAAAATGGCAGTTGTATTGATAAACATCTCATGGGCATGCCACTCTGACTGTTaGGGGCTGTTCGGGGTGGGA +
Preference number: 5 (lower is better)
Translates to: SWYHIAKMAVVLINISWACHSDC*GLFGVG
Trigger: TCCCACCCCGAACAGCCCCAAACAGTCAGAGTGGCA...TGCCCATGAGATGTTTATCAATACAACTGCCATTTTAGCTATGTGGTACCAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CAA 90 bp ATGGGTTTAACTAACAGACTAAGGACATGCACTGATTACAGGACTCTGTCCCAGACGGTGTCTCCCTCCTaGACAGCATTGAAGAAGGCT +
Preference number: 5 (lower is better)
Translates to: MGLTNRLRTCTDYRTLSQTVSPS*TALKKA
Trigger: AGCCTTCTTCAATGCTGTCAAGGAGGGAGACACCGT...CTGGGACAGAGTCCTGTAATCAGTGCATGTCCTTAGTCTGTTAGTTAAACCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CAA 90 bp ATGGGTTTAACTAACAGACTAAGGACATGCACTGATTACAGGACTCTGTCCCAGTTTCCTCCCTTGGCGTaGAGTTTCTGGACTTGGGTC +
Preference number: 5 (lower is better)
Translates to: MGLTNRLRTCTDYRTLSQFPPLA*SFWTWV
Trigger: GACCCAAGTCCAGAAACTCAACGCCAAGGGAGGAAA...CTGGGACAGAGTCCTGTAATCAGTGCATGTCCTTAGTCTGTTAGTTAAACCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CAA 90 bp ATGGGTTTAACTAACAGACTAAGGACATGCACTGATTACAGGACTCTGTCCCAGGTGCCTGACCCATTATaGACTGGTTCCCATGACTCC +
Preference number: 5 (lower is better)
Translates to: MGLTNRLRTCTDYRTLSQVPDPL*TGSHDS
Trigger: GGAGTCATGGGAACCAGTCAATAATGGGTCAGGCAC...CTGGGACAGAGTCCTGTAATCAGTGCATGTCCTTAGTCTGTTAGTTAAACCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000612439.4
CDS-3UTR CAA 90 bp AGTCATGATAGGATCGCCCCCTTGCCGTGGCAATTAAGAGAATCAATCCATTGGATGGTATTGATGCTCTaGGCCCATTTCCATGCTGCA +
Preference number: 5 (lower is better)
Translates to: SHDRIAPLPWQLRESIHWMVLML*AHFHAA
Trigger: TGCAGCATGGAAATGGGCCAAGAGCATCAATACCAT...CCAATGGATTGATTCTCTTAATTGCCACGGCAAGGGGGCGATCCTATCATGACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CAA 90 bp GAAAGAAATAGCTCTGCAGCAAACCCCAGGGTTGTGCAGTTACAGATCAAAATGGGAGTCCAGGACCCCTaGCAATCGGAAATCTCTGTA +
Preference number: 5 (lower is better)
Translates to: ERNSSAANPRVVQLQIKMGVQDP*QSEISV
Trigger: TACAGAGATTTCCGATTGCAAGGGGTCCTGGACTCC...CATTTTGATCTGTAACTGCACAACCCTGGGGTTTGCTGCAGAGCTATTTCTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
CDS-3UTR CAA 90 bp ATTGCTTGTAAACATATAGACATGGACATCAGGAAATCAGTGGATATGAAGGTCAAGGGGGAGAATCAATaGCGAGCCCCGAGCCCGCAG +
Preference number: 5 (lower is better)
Translates to: IACKHIDMDIRKSVDMKVKGENQ*RAPSPQ
Trigger: CTGCGGGCTCGGGGCTCGCAATTGATTCTCCCCCTT...GACCTTCATATCCACTGATTTCCTGATGTCCATGTCTATATGTTTACAAGCAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS TCA 90 bp TCTGACCACCACGCAAAGGCCTCTGCGTGGTGCTCCTCATTTTGCTaGAGAACTTCAATGACTAGTTCAGCAAGACGTATTGTATCTTCA +
Preference number: 5 (lower is better)
Translates to: SDHHAKASAWCSSFC*RTSMTSSARRIVSS
Trigger: TGAAGATACAATACGTCTTGCTGAACTAGTCATTGAAGTTCTTCAGCAAAATGAGGAGCACCACGCAGAGGCCTTTGCGTGGTGGTCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000478570.5
ENST00000612439.4
CDS TCA 90 bp CACGCAAAGGCCTCTTTCCCCTCTGCGTGGTGCTCCTCATTTTGCTaGAGAACTTCAATGACTAGTTCAGCAAGACGTATTGTATCTTCA +
Preference number: 5 (lower is better)
Translates to: HAKASFPSAWCSSFC*RTSMTSSARRIVSS
Trigger: TGAAGATACAATACGTCTTGCTGAACTAGTCATTGAAGTTCTTCAGCAAAATGAGGAGCACCACGCAGAGGGGAAAGAGGCCTTTGCGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491424.5
CDS-3UTR CAA 90 bp TCTTGGTACCACATAGCTAAAATGGCAGTTGTATTGATAAACATCTCATGGGCAGTCTGCAGCTGCTGTTaGCTGATCTTCTGCTGCCGG +
Preference number: 5 (lower is better)
Translates to: SWYHIAKMAVVLINISWAVCSCC*LIFCCR
Trigger: CCGGCAGCAGAAGATCAGCAAACAGCAGCTGCAGAC...TGCCCATGAGATGTTTATCAATACAACTGCCATTTTAGCTATGTGGTACCAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CAA 90 bp CAAACCCCAGGGTTGTGCAGTTACAGATCAAAATGCAATGTACATGACAGATATCTCAGCACAGTCTCCTaGCTGAGGCCGTCAATCTCA +
Preference number: 5 (lower is better)
Translates to: QTPGLCSYRSKCNVHDRYLSTVS*LRPSIS
Trigger: TGAGATTGACGGCCTCAGCAAGGAGACTGTGCTGAG...ATATCTGTCATGTACATTGCATTTTGATCTGTAACTGCACAACCCTGGGGTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CAA 90 bp CAAACCCCAGGGTTGTGCAGTTACAGATCAAAATGCAATGTACATGACAGATATGCTTGCTCATCTGGATaGTCCAGCTGGCAGGCATTG +
Preference number: 5 (lower is better)
Translates to: QTPGLCSYRSKCNVHDRYACSSG*SSWQAL
Trigger: CAATGCCTGCCAGCTGGACAATCCAGATGAGCAAGC...ATATCTGTCATGTACATTGCATTTTGATCTGTAACTGCACAACCCTGGGGTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CAA 90 bp CAAACCCCAGGGTTGTGCAGTTACAGATCAAAATGCAATGTACATGACAGATATGGCATGCTCTCCAAGTaGGCCATGAGCAGGTTGACA +
Preference number: 5 (lower is better)
Translates to: QTPGLCSYRSKCNVHDRYGMLSK*AMSRLT
Trigger: TGTCAACCTGCTCATGGCCAACTTGGAGAGCATGCC...ATATCTGTCATGTACATTGCATTTTGATCTGTAACTGCACAACCCTGGGGTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CAA 90 bp AATGTACTTGATGTACTTGCCCTCACATCCATTTACCACCAATGCATACATAGTTTGAACTCCCCGCCTTaGGATACCGGCATGCTCTCC +
Preference number: 5 (lower is better)
Translates to: NVLDVLALTSIYHQCIHSLNSPP*DTGMLS
Trigger: GGAGAGCATGCCGGTATCCAAAGGCGGGGAGTTCAA...ACTATGTATGCATTGGTGGTAAATGGATGTGAGGGCAAGTACATCAAGTACATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CAA 90 bp TCTTGGTACCACATAGCTAAAATGGCAGTTGTATTGATAAACATCTCATGGGCATTGAACTCCCCGCCTTaGGATACCGGCATGCTCTCC +
Preference number: 5 (lower is better)
Translates to: SWYHIAKMAVVLINISWALNSPP*DTGMLS
Trigger: GGAGAGCATGCCGGTATCCAAAGGCGGGGAGTTCAA...TGCCCATGAGATGTTTATCAATACAACTGCCATTTTAGCTATGTGGTACCAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CAA 90 bp GAAAGAAATAGCTCTGCAGCAAACCCCAGGGTTGTGCAGTTACAGATCAAAATGTTGAGTTTCTGGAGCTaGAACTCCCCGCCTTTGGAT +
Preference number: 5 (lower is better)
Translates to: ERNSSAANPRVVQLQIKMLSFWS*NSPPLD
Trigger: ATCCAAAGGCGGGGAGTTCAAGCTCCAGAAACTCAA...CATTTTGATCTGTAACTGCACAACCCTGGGGTTTGCTGCAGAGCTATTTCTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CAA 90 bp CAAGAGCCATCTTCTCCAGGACCATTCTTTGGTTTTCTCAACAGAAGCAATCTGTTGAGTTTCTGGAGCTaGAACTCCCCGCCTTTGGAT +
Preference number: 5 (lower is better)
Translates to: QEPSSPGPFFGFLNRSNLLSFWS*NSPPLD
Trigger: ATCCAAAGGCGGGGAGTTCAAGCTCCAGAAACTCAA...CAGATTGCTTCTGTTGAGAAAACCAAAGAATGGTCCTGGAGAAGATGGCTCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490353.2
CDS-3UTR CAA 90 bp GAAAGAAATAGCTCTGCAGCAAACCCCAGGGTTGTGCAGTTACAGATCAAAATGGCATTGTGGCTGCGTTaGAGTTTCTGGAGCTTGAAC +
Preference number: 5 (lower is better)
Translates to: ERNSSAANPRVVQLQIKMALWLR*SFWSLN
Trigger: GTTCAAGCTCCAGAAACTCAAACGCAGCCACAATGC...CATTTTGATCTGTAACTGCACAACCCTGGGGTTTGCTGCAGAGCTATTTCTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CAA 90 bp ATTGCTTGTAAACATATAGACATGGACATCAGGAAATCAGTGGATATGAAGGTCCCCTCCTTGACAGCATaGAAGAAGGCTCGGCCACCC +
Preference number: 5 (lower is better)
Translates to: IACKHIDMDIRKSVDMKVPSLTA*KKARPP
Trigger: GGGTGGCCGAGCCTTCTTCAATGCTGTCAAGGAGGG...GACCTTCATATCCACTGATTTCCTGATGTCCATGTCTATATGTTTACAAGCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CAA 90 bp AATGTACTTGATGTACTTGCCCTCACATCCATTTACCACCAATGCATACATAGTGTTGAGTTTCTGGACTaGGGTCGGGGGCACAGGCTT +
Preference number: 5 (lower is better)
Translates to: NVLDVLALTSIYHQCIHSVEFLD*GRGHRL
Trigger: AAGCCTGTGCCCCCGACCCAAGTCCAGAAACTCAAC...ACTATGTATGCATTGGTGGTAAATGGATGTGAGGGCAAGTACATCAAGTACATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CAA 90 bp GAAAGAAATAGCTCTGCAGCAAACCCCAGGGTTGTGCAGTTACAGATCAAAATGGGTACATTTCCTCCCTaGGCGTTGAGTTTCTGGACT +
Preference number: 5 (lower is better)
Translates to: ERNSSAANPRVVQLQIKMGTFPP*ALSFWT
Trigger: AGTCCAGAAACTCAACGCCAAGGGAGGAAATGTACC...CATTTTGATCTGTAACTGCACAACCCTGGGGTTTGCTGCAGAGCTATTTCTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CAA 90 bp AGTCATGATAGGATCGCCCCCTTGCCGTGGCAATTAAGAGAATCAATCCATTGGTCTATCTGCGTAAAATaGAGAGATAGGGGCATCCAG +
Preference number: 5 (lower is better)
Translates to: SHDRIAPLPWQLRESIHWSICVK*RDRGIQ
Trigger: CTGGATGCCCCTATCTCTCAATTTTACGCAGATAGA...CCAATGGATTGATTCTCTTAATTGCCACGGCAAGGGGGCGATCCTATCATGACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CAA 90 bp AGTCATGATAGGATCGCCCCCTTGCCGTGGCAATTAAGAGAATCAATCCATTGGTGTTTTTACCTCCTCTaGTGGCACTGGGGTAACAAT +
Preference number: 5 (lower is better)
Translates to: SHDRIAPLPWQLRESIHWCFYLL*WHWGNN
Trigger: ATTGTTACCCCAGTGCCACAAGAGGAGGTAAAAACA...CCAATGGATTGATTCTCTTAATTGCCACGGCAAGGGGGCGATCCTATCATGACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CAA 90 bp ATCGCCCCCTTGCCGTGGCAATTAAGAGAATCAATCCATTGGTATGTAGCCATCTGGGGCAAACAGGTCTaGCAGGTGTTTGTGAAATTT +
Preference number: 5 (lower is better)
Translates to: IAPLPWQLRESIHWYVAIWGKQV*QVFVKF
Trigger: AAATTTCACAAACACCTGCAAGACCTGTTTGCCCCA...GATGGCTACATACCAATGGATTGATTCTCTTAATTGCCACGGCAAGGGGGCGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CAA 90 bp AGTCATGATAGGATCGCCCCCTTGCCGTGGCAATTAAGAGAATCAATCCATTGGTGGGGCAAACAGGTCTaGCAGGTGTTTGTGAAATTT +
Preference number: 5 (lower is better)
Translates to: SHDRIAPLPWQLRESIHWWGKQV*QVFVKF
Trigger: AAATTTCACAAACACCTGCAAGACCTGTTTGCCCCA...CCAATGGATTGATTCTCTTAATTGCCACGGCAAGGGGGCGATCCTATCATGACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CAA 90 bp AGTCATGATAGGATCGCCCCCTTGCCGTGGCAATTAAGAGAATCAATCCATTGGGAATGGATTGTGCAATaGAGGACTCCATCAGATCCA +
Preference number: 5 (lower is better)
Translates to: SHDRIAPLPWQLRESIHWEWIVQ*RTPSDP
Trigger: TGGATCTGATGGAGTCCTCAATTGCACAATCCATTC...CCAATGGATTGATTCTCTTAATTGCCACGGCAAGGGGGCGATCCTATCATGACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CAA 90 bp AGTCATGATAGGATCGCCCCCTTGCCGTGGCAATTAAGAGAATCAATCCATTGGATTCGATCATGTCACTaGCCATCAACTTCAGCCGTT +
Preference number: 5 (lower is better)
Translates to: SHDRIAPLPWQLRESIHWIRSCH*PSTSAV
Trigger: AACGGCTGAAGTTGATGGCAAGTGACATGATCGAAT...CCAATGGATTGATTCTCTTAATTGCCACGGCAAGGGGGCGATCCTATCATGACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
CDS-3UTR CAA 90 bp TTCCATAACTGTAGGCTTTATATAAGGCAAAAGCAAGATGGATCCACTACTTTAAAGGGGGAGAATCAATaGCGAGCCCCGAGCCCGCAG +
Preference number: 5 (lower is better)
Translates to: FHNCRLYIRQKQDGSTTLKGENQ*RAPSPQ
Trigger: CTGCGGGCTCGGGGCTCGCAATTGATTCTCCCCCTT...TAAAGTAGTGGATCCATCTTGCTTTTGCCTTATATAAAGCCTACAGTTATGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CAA 90 bp ATTGCTTGTAAACATATAGACATGGACATCAGGAAATCAGTGGATATGAAGGTCGTCTGCAGCTGCTGTTaGCTGATCTTCTGCTGCCGG +
Preference number: 5 (lower is better)
Translates to: IACKHIDMDIRKSVDMKVVCSCC*LIFCCR
Trigger: CCGGCAGCAGAAGATCAGCAAACAGCAGCTGCAGAC...GACCTTCATATCCACTGATTTCCTGATGTCCATGTCTATATGTTTACAAGCAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CAA 90 bp TCTTGGTACCACATAGCTAAAATGGCAGTTGTATTGATAAACATCTCATGGGCACTCAGCACAGTCTCCTaGCTGAGGCCGTCAATCTCA +
Preference number: 5 (lower is better)
Translates to: SWYHIAKMAVVLINISWALSTVS*LRPSIS
Trigger: TGAGATTGACGGCCTCAGCAAGGAGACTGTGCTGAG...TGCCCATGAGATGTTTATCAATACAACTGCCATTTTAGCTATGTGGTACCAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CAA 90 bp AATGTACTTGATGTACTTGCCCTCACATCCATTTACCACCAATGCATACATAGTCTCAGCACAGTCTCCTaGCTGAGGCCGTCAATCTCA +
Preference number: 5 (lower is better)
Translates to: NVLDVLALTSIYHQCIHSLSTVS*LRPSIS
Trigger: TGAGATTGACGGCCTCAGCAAGGAGACTGTGCTGAG...ACTATGTATGCATTGGTGGTAAATGGATGTGAGGGCAAGTACATCAAGTACATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CAA 90 bp TTGATGTACTTGCCCTCACATCCATTTACCACCAATGCATACATAGTACATGAAGCTTGCTCATCTGGATaGTCCAGCTGGCAGGCATTG +
Preference number: 5 (lower is better)
Translates to: LMYLPSHPFTTNAYIVHEACSSG*SSWQAL
Trigger: CAATGCCTGCCAGCTGGACAATCCAGATGAGCAAGC...TTCATGTACTATGTATGCATTGGTGGTAAATGGATGTGAGGGCAAGTACATCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CAA 90 bp TCTTGGTACCACATAGCTAAAATGGCAGTTGTATTGATAAACATCTCATGGGCAGCTTGCTCATCTGGATaGTCCAGCTGGCAGGCATTG +
Preference number: 5 (lower is better)
Translates to: SWYHIAKMAVVLINISWAACSSG*SSWQAL
Trigger: CAATGCCTGCCAGCTGGACAATCCAGATGAGCAAGC...TGCCCATGAGATGTTTATCAATACAACTGCCATTTTAGCTATGTGGTACCAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CAA 90 bp GATACCACTTCGTTTTGCTGGAATGCCCTTGCCACCCTTTCTGTACTTGCAAATACAAACTTGGGAAATTaGCGTTCCCTGGCTATTTGG +
Preference number: 5 (lower is better)
Translates to: DTTSFCWNALATLSVLANTNLGN*RSLAIW
Trigger: CCAAATAGCCAGGGAACGCAAATTTCCCAAGTTTGT...ATTTGCAAGTACAGAAAGGGTGGCAAGGGCATTCCAGCAAAACGAAGTGGTATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490353.2
CDS-3UTR CAA 90 bp ATCGCCCCCTTGCCGTGGCAATTAAGAGAATCAATCCATTGGTATGTAGCCATCTCTTTGGATACAAACTaGGGAAATTTGCGTTCCCTG +
Preference number: 5 (lower is better)
Translates to: IAPLPWQLRESIHWYVAISLDTN*GNLRSL
Trigger: CAGGGAACGCAAATTTCCCAAGTTTGTATCCAAAGA...GATGGCTACATACCAATGGATTGATTCTCTTAATTGCCACGGCAAGGGGGCGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CAA 90 bp TCTTGGTACCACATAGCTAAAATGGCAGTTGTATTGATAAACATCTCATGGGCAGGCATGCTCTCCAAGTaGGCCATGAGCAGGTTGACA +
Preference number: 5 (lower is better)
Translates to: SWYHIAKMAVVLINISWAGMLSK*AMSRLT
Trigger: TGTCAACCTGCTCATGGCCAACTTGGAGAGCATGCC...TGCCCATGAGATGTTTATCAATACAACTGCCATTTTAGCTATGTGGTACCAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CAA 90 bp ATGGGTTTAACTAACAGACTAAGGACATGCACTGATTACAGGACTCTGTCCCAGTCGATGATGGAAGCATaGTGGCTGCGTTTGAGTTTC +
Preference number: 5 (lower is better)
Translates to: MGLTNRLRTCTDYRTLSQSMMEA*WLRLSF
Trigger: GAAACTCAAACGCAGCCACAATGCTTCCATCATCGA...CTGGGACAGAGTCCTGTAATCAGTGCATGTCCTTAGTCTGTTAGTTAAACCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CAA 90 bp GAAAGAAATAGCTCTGCAGCAAACCCCAGGGTTGTGCAGTTACAGATCAAAATGTCGATGATGGAAGCATaGTGGCTGCGTTTGAGTTTC +
Preference number: 5 (lower is better)
Translates to: ERNSSAANPRVVQLQIKMSMMEA*WLRLSF
Trigger: GAAACTCAAACGCAGCCACAATGCTTCCATCATCGA...CATTTTGATCTGTAACTGCACAACCCTGGGGTTTGCTGCAGAGCTATTTCTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CAA 90 bp CAAACCCCAGGGTTGTGCAGTTACAGATCAAAATGCAATGTACATGACAGATATAGCACGACATCTGACTaGGAGAGCTGGTTCTCACTC +
Preference number: 5 (lower is better)
Translates to: QTPGLCSYRSKCNVHDRYSTTSD*ESWFSL
Trigger: GAGTGAGAACCAGCTCTCCAAGTCAGATGTCGTGCT...ATATCTGTCATGTACATTGCATTTTGATCTGTAACTGCACAACCCTGGGGTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CAA 90 bp ATCGCCCCCTTGCCGTGGCAATTAAGAGAATCAATCCATTGGTATGTAGCCATCCAAAGATTTGAGGCCTaGGACTTCCATAATTACCAC +
Preference number: 5 (lower is better)
Translates to: IAPLPWQLRESIHWYVAIQRFEA*DFHNYH
Trigger: GTGGTAATTATGGAAGTCCAAGGCCTCAAATCTTTG...GATGGCTACATACCAATGGATTGATTCTCTTAATTGCCACGGCAAGGGGGCGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CAA 90 bp ATCGCCCCCTTGCCGTGGCAATTAAGAGAATCAATCCATTGGTATGTAGCCATCATTCGGACAGCAAGTTaGATTTTGAGATCTTGGTCG +
Preference number: 5 (lower is better)
Translates to: IAPLPWQLRESIHWYVAIIRTAS*ILRSWS
Trigger: CGACCAAGATCTCAAAATCAAACTTGCTGTCCGAAT...GATGGCTACATACCAATGGATTGATTCTCTTAATTGCCACGGCAAGGGGGCGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CAA 90 bp TTCCATAACTGTAGGCTTTATATAAGGCAAAAGCAAGATGGATCCACTACTTTACCCTCCTTGACAGCATaGAAGAAGGCTCGGCCACCC +
Preference number: 5 (lower is better)
Translates to: FHNCRLYIRQKQDGSTTLPSLTA*KKARPP
Trigger: GGGTGGCCGAGCCTTCTTCAATGCTGTCAAGGAGGG...TAAAGTAGTGGATCCATCTTGCTTTTGCCTTATATAAAGCCTACAGTTATGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CAA 90 bp CAAACCCCAGGGTTGTGCAGTTACAGATCAAAATGCAATGTACATGACAGATATACGGTGTCTCCCTCCTaGACAGCATTGAAGAAGGCT +
Preference number: 5 (lower is better)
Translates to: QTPGLCSYRSKCNVHDRYTVSPS*TALKKA
Trigger: AGCCTTCTTCAATGCTGTCAAGGAGGGAGACACCGT...ATATCTGTCATGTACATTGCATTTTGATCTGTAACTGCACAACCCTGGGGTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CAA 90 bp CAAACCCCAGGGTTGTGCAGTTACAGATCAAAATGCAATGTACATGACAGATATCCACAGGATGCGGTCTaGTTCATCGTCACTGGCAAA +
Preference number: 5 (lower is better)
Translates to: QTPGLCSYRSKCNVHDRYPQDAV*FIVTGK
Trigger: TTTGCCAGTGACGATGAACAAGACCGCATCCTGTGG...ATATCTGTCATGTACATTGCATTTTGATCTGTAACTGCACAACCCTGGGGTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CAA 90 bp GAAAGAAATAGCTCTGCAGCAAACCCCAGGGTTGTGCAGTTACAGATCAAAATGCATCAACTTCAGCCGTaGTTCCAGGTGCTTTCCAAA +
Preference number: 5 (lower is better)
Translates to: ERNSSAANPRVVQLQIKMHQLQP*FQVLSK
Trigger: TTTGGAAAGCACCTGGAACAACGGCTGAAGTTGATG...CATTTTGATCTGTAACTGCACAACCCTGGGGTTTGCTGCAGAGCTATTTCTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
CDS-3UTR CAA 90 bp AGTCATGATAGGATCGCCCCCTTGCCGTGGCAATTAAGAGAATCAATCCATTGGGCAATCCTGGTTCTTTaGACACAAGATTCGATCATG +
Preference number: 5 (lower is better)
Translates to: SHDRIAPLPWQLRESIHWAILVL*TQDSIM
Trigger: CATGATCGAATCTTGTGTCAAAAGAACCAGGATTGC...CCAATGGATTGATTCTCTTAATTGCCACGGCAAGGGGGCGATCCTATCATGACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
CDS-3UTR CAA 90 bp ATGGGTTTAACTAACAGACTAAGGACATGCACTGATTACAGGACTCTGTCCCAGATGGTATTGATGCTCTaGGCCCATTTCCATGCTGCA +
Preference number: 5 (lower is better)
Translates to: MGLTNRLRTCTDYRTLSQMVLML*AHFHAA
Trigger: TGCAGCATGGAAATGGGCCAAGAGCATCAATACCAT...CTGGGACAGAGTCCTGTAATCAGTGCATGTCCTTAGTCTGTTAGTTAAACCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CAA 90 bp ATGGGTTTAACTAACAGACTAAGGACATGCACTGATTACAGGACTCTGTCCCAGGGTACATCCACATATTaGGAAGCTGCCTTCACGGTA +
Preference number: 5 (lower is better)
Translates to: MGLTNRLRTCTDYRTLSQGTSTY*EAAFTV
Trigger: TACCGTGAAGGCAGCTTCCAAATATGTGGATGTACC...CTGGGACAGAGTCCTGTAATCAGTGCATGTCCTTAGTCTGTTAGTTAAACCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
CDS-3UTR CAA 90 bp CAAACCCCAGGGTTGTGCAGTTACAGATCAAAATGCAATGTACATGACAGATATGGAGTCCAGGACCCCTaGCAATCGGAAATCTCTGTA +
Preference number: 5 (lower is better)
Translates to: QTPGLCSYRSKCNVHDRYGVQDP*QSEISV
Trigger: TACAGAGATTTCCGATTGCAAGGGGTCCTGGACTCC...ATATCTGTCATGTACATTGCATTTTGATCTGTAACTGCACAACCCTGGGGTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
CDS-3UTR CAA 90 bp ATCGCCCCCTTGCCGTGGCAATTAAGAGAATCAATCCATTGGTATGTAGCCATCTTGGGTAGGTTCACATaGGGTAGGTTACTGGTTAAA +
Preference number: 5 (lower is better)
Translates to: IAPLPWQLRESIHWYVAILGRFT*GRLLVK
Trigger: TTTAACCAGTAACCTACCCAATGTGAACCTACCCAA...GATGGCTACATACCAATGGATTGATTCTCTTAATTGCCACGGCAAGGGGGCGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000383710.9
CDS TCA 90 bp CAAAGGCCTCTGCGTGGTGCTCCTCATTTTGCTGAAGAACTTCAATaGCTAGTTCAGCAAGACGTATTGTATCTTCAAGCTTTTTGGCAG +
Preference number: 5 (lower is better)
Translates to: QRPLRGAPHFAEELQ*LVQQDVLYLQAFWQ
Trigger: CTGCCAAAAAGCTTGAAGATACAATACGTCTTGCTGAACTAGTCATTGAAGTTCTTCAGCAAAATGAGGAGCACCACGCAGAGGCCTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000478570.5
ENST00000612439.4
CDS TCA 90 bp CATGTGGCTCTGCGTGGTGCTCCTCATTTTGCTGAAGAACTTCAATaGCTAGTTCAGCAAGACGTATTGTATCTTCAAGCTTTTTGGCAG +
Preference number: 5 (lower is better)
Translates to: HVALRGAPHFAEELQ*LVQQDVLYLQAFWQ
Trigger: CTGCCAAAAAGCTTGAAGATACAATACGTCTTGCTGAACTAGTCATTGAAGTTCTTCAGCAAAATGAGGAGCACCACGCAGAGCCACATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000383710.9
CDS TCA 90 bp AGAACTATATGGCCACCCCAACTCCAGCCAAGAATCACTTCCAAGTaGCTGACATTCTCATCAGCACATGCCTTAGAAATCTACTTGACA +
Preference number: 5 (lower is better)
Translates to: RTIWPPQLQPRITSK*LTFSSAHALEIYLT
Trigger: TGTCAAGTAGATTTCTAAGGCATGTGCTGATGAGAATGTCAGTCACTTGGAAGTGATTCTTGGCTGGAGTTGGGGTGGCCATATAGTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478408.1
CDS GCA 90 bp ACTGATAAATATGAAGCTGTAAGTCCATCCGGTCCGTCAACCAGGTaGAGATCACGTTCATGGAGCTGTTGTACCATTGATCAAATAACC +
Preference number: 5 (lower is better)
Translates to: TDKYEAVSPSGPSTR*RSRSWSCCTIDQIT
Trigger: GGTTATTTGATCAATGGTACAACAGCTCCATGAACGTGATCTGCACCTGGTTGACGGACCGGATGGACTTACAGCTTCATATTTATCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000466621.2
ENST00000473635.5
ENST00000474560.1
ENST00000612439.4
ENST00000613879.4
CDS GCA 90 bp AGCCACCTATACTTACCTTTTGACACAAGATTCGATCATGTCACTTaGCATCAACTTCAGCCGTTGTTCCAGGTGCTTTCCAAACTCTTC +
Preference number: 5 (lower is better)
Translates to: SHLYLPFDTRFDHVT*HQLQPLFQVLSKLF
Trigger: GAAGAGTTTGGAAAGCACCTGGAACAACGGCTGAAGTTGATGGCAAGTGACATGATCGAATCTTGTGTCAAAAGGTAAGTATAGGTGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463002.2
CDS-3UTR CAA 90 bp ATGGGTTTAACTAACAGACTAAGGACATGCACTGATTACAGGACTCTGTCCCAGACAAACTTGGGAAATTaGCGTTCCCTGGCTATTTGG +
Preference number: 5 (lower is better)
Translates to: MGLTNRLRTCTDYRTLSQTNLGN*RSLAIW
Trigger: CCAAATAGCCAGGGAACGCAAATTTCCCAAGTTTGT...CTGGGACAGAGTCCTGTAATCAGTGCATGTCCTTAGTCTGTTAGTTAAACCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CAA 90 bp TTCCATAACTGTAGGCTTTATATAAGGCAAAAGCAAGATGGATCCACTACTTTATTGAACTCCCCGCCTTaGGATACCGGCATGCTCTCC +
Preference number: 5 (lower is better)
Translates to: FHNCRLYIRQKQDGSTTLLNSPP*DTGMLS
Trigger: GGAGAGCATGCCGGTATCCAAAGGCGGGGAGTTCAA...TAAAGTAGTGGATCCATCTTGCTTTTGCCTTATATAAAGCCTACAGTTATGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CAA 90 bp CAAACCCCAGGGTTGTGCAGTTACAGATCAAAATGCAATGTACATGACAGATATGCATTGTGGCTGCGTTaGAGTTTCTGGAGCTTGAAC +
Preference number: 5 (lower is better)
Translates to: QTPGLCSYRSKCNVHDRYALWLR*SFWSLN
Trigger: GTTCAAGCTCCAGAAACTCAAACGCAGCCACAATGC...ATATCTGTCATGTACATTGCATTTTGATCTGTAACTGCACAACCCTGGGGTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CAA 90 bp TTGATGTACTTGCCCTCACATCCATTTACCACCAATGCATACATAGTACATGAAAGCACGACATCTGACTaGGAGAGCTGGTTCTCACTC +
Preference number: 5 (lower is better)
Translates to: LMYLPSHPFTTNAYIVHESTTSD*ESWFSL
Trigger: GAGTGAGAACCAGCTCTCCAAGTCAGATGTCGTGCT...TTCATGTACTATGTATGCATTGGTGGTAAATGGATGTGAGGGCAAGTACATCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CAA 90 bp AATGTACTTGATGTACTTGCCCTCACATCCATTTACCACCAATGCATACATAGTAGCACGACATCTGACTaGGAGAGCTGGTTCTCACTC +
Preference number: 5 (lower is better)
Translates to: NVLDVLALTSIYHQCIHSSTTSD*ESWFSL
Trigger: GAGTGAGAACCAGCTCTCCAAGTCAGATGTCGTGCT...ACTATGTATGCATTGGTGGTAAATGGATGTGAGGGCAAGTACATCAAGTACATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CAA 90 bp ATGCCCTTGCCACCCTTTCTGTACTTGCAAATGCTTTCTAGCCAAATTCAAGGGCAAAGATTTGAGGCCTaGGACTTCCATAATTACCAC +
Preference number: 5 (lower is better)
Translates to: MPLPPFLYLQMLSSQIQGQRFEA*DFHNYH
Trigger: GTGGTAATTATGGAAGTCCAAGGCCTCAAATCTTTG...CCCTTGAATTTGGCTAGAAAGCATTTGCAAGTACAGAAAGGGTGGCAAGGGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490353.2
CDS-3UTR CAA 90 bp TCTTGGTACCACATAGCTAAAATGGCAGTTGTATTGATAAACATCTCATGGGCAACGGTGTCTCCCTCCTaGACAGCATTGAAGAAGGCT +
Preference number: 5 (lower is better)
Translates to: SWYHIAKMAVVLINISWATVSPS*TALKKA
Trigger: AGCCTTCTTCAATGCTGTCAAGGAGGGAGACACCGT...TGCCCATGAGATGTTTATCAATACAACTGCCATTTTAGCTATGTGGTACCAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CAA 90 bp TCTTGGTACCACATAGCTAAAATGGCAGTTGTATTGATAAACATCTCATGGGCACCACAGGATGCGGTCTaGTTCATCGTCACTGGCAAA +
Preference number: 5 (lower is better)
Translates to: SWYHIAKMAVVLINISWAPQDAV*FIVTGK
Trigger: TTTGCCAGTGACGATGAACAAGACCGCATCCTGTGG...TGCCCATGAGATGTTTATCAATACAACTGCCATTTTAGCTATGTGGTACCAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CAA 90 bp AATGTACTTGATGTACTTGCCCTCACATCCATTTACCACCAATGCATACATAGTCCACAGGATGCGGTCTaGTTCATCGTCACTGGCAAA +
Preference number: 5 (lower is better)
Translates to: NVLDVLALTSIYHQCIHSPQDAV*FIVTGK
Trigger: TTTGCCAGTGACGATGAACAAGACCGCATCCTGTGG...ACTATGTATGCATTGGTGGTAAATGGATGTGAGGGCAAGTACATCAAGTACATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CAA 90 bp AATGTACTTGATGTACTTGCCCTCACATCCATTTACCACCAATGCATACATAGTTTTCCTCCCTTGGCGTaGAGTTTCTGGACTTGGGTC +
Preference number: 5 (lower is better)
Translates to: NVLDVLALTSIYHQCIHSFPPLA*SFWTWV
Trigger: GACCCAAGTCCAGAAACTCAACGCCAAGGGAGGAAA...ACTATGTATGCATTGGTGGTAAATGGATGTGAGGGCAAGTACATCAAGTACATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CAA 90 bp ATGGGTTTAACTAACAGACTAAGGACATGCACTGATTACAGGACTCTGTCCCAGACTCGGAGCCTCTCTTaGATTTCTTCAAAACGTTCC +
Preference number: 5 (lower is better)
Translates to: MGLTNRLRTCTDYRTLSQTRSLS*ISSKRS
Trigger: GGAACGTTTTGAAGAAATCAAAGAGAGGCTCCGAGT...CTGGGACAGAGTCCTGTAATCAGTGCATGTCCTTAGTCTGTTAGTTAAACCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CAA 90 bp GAAAGAAATAGCTCTGCAGCAAACCCCAGGGTTGTGCAGTTACAGATCAAAATGTGTTTTTACCTCCTCTaGTGGCACTGGGGTAACAAT +
Preference number: 5 (lower is better)
Translates to: ERNSSAANPRVVQLQIKMCFYLL*WHWGNN
Trigger: ATTGTTACCCCAGTGCCACAAGAGGAGGTAAAAACA...CATTTTGATCTGTAACTGCACAACCCTGGGGTTTGCTGCAGAGCTATTTCTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CAA 90 bp GAAAGAAATAGCTCTGCAGCAAACCCCAGGGTTGTGCAGTTACAGATCAAAATGGTATCTTCAAGCTTTTaGGCAGGAGTGATTAACCGG +
Preference number: 5 (lower is better)
Translates to: ERNSSAANPRVVQLQIKMVSSSF*AGVINR
Trigger: CCGGTTAATCACTCCTGCCAAAAAGCTTGAAGATAC...CATTTTGATCTGTAACTGCACAACCCTGGGGTTTGCTGCAGAGCTATTTCTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CAA 90 bp ATCGCCCCCTTGCCGTGGCAATTAAGAGAATCAATCCATTGGTATGTAGCCATCGTTCAGCAAGACGTATaGTATCTTCAAGCTTTTTGG +
Preference number: 5 (lower is better)
Translates to: IAPLPWQLRESIHWYVAIVQQDV*YLQAFW
Trigger: CCAAAAAGCTTGAAGATACAATACGTCTTGCTGAAC...GATGGCTACATACCAATGGATTGATTCTCTTAATTGCCACGGCAAGGGGGCGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CAA 90 bp GAAAGAAATAGCTCTGCAGCAAACCCCAGGGTTGTGCAGTTACAGATCAAAATGGTGGTGCTCCTCATTTaGCTGAAGAACTTCAATGAC +
Preference number: 5 (lower is better)
Translates to: ERNSSAANPRVVQLQIKMVVLLI*LKNFND
Trigger: GTCATTGAAGTTCTTCAGCAAAATGAGGAGCACCAC...CATTTTGATCTGTAACTGCACAACCCTGGGGTTTGCTGCAGAGCTATTTCTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CAA 90 bp GAAAGAAATAGCTCTGCAGCAAACCCCAGGGTTGTGCAGTTACAGATCAAAATGATTCGATCATGTCACTaGCCATCAACTTCAGCCGTT +
Preference number: 5 (lower is better)
Translates to: ERNSSAANPRVVQLQIKMIRSCH*PSTSAV
Trigger: AACGGCTGAAGTTGATGGCAAGTGACATGATCGAAT...CATTTTGATCTGTAACTGCACAACCCTGGGGTTTGCTGCAGAGCTATTTCTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
CDS-3UTR CAA 90 bp ATGGGTTTAACTAACAGACTAAGGACATGCACTGATTACAGGACTCTGTCCCAGATTCGATCATGTCACTaGCCATCAACTTCAGCCGTT +
Preference number: 5 (lower is better)
Translates to: MGLTNRLRTCTDYRTLSQIRSCH*PSTSAV
Trigger: AACGGCTGAAGTTGATGGCAAGTGACATGATCGAAT...CTGGGACAGAGTCCTGTAATCAGTGCATGTCCTTAGTCTGTTAGTTAAACCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
CDS-3UTR CAA 90 bp ATCGCCCCCTTGCCGTGGCAATTAAGAGAATCAATCCATTGGTATGTAGCCATCTGCTGCAAAGTTTTGTaGATTGAGCTTTGGCATCAA +
Preference number: 5 (lower is better)
Translates to: IAPLPWQLRESIHWYVAICCKVL*IELWHQ
Trigger: TTGATGCCAAAGCTCAATCAACAAAACTTTGCAGCA...GATGGCTACATACCAATGGATTGATTCTCTTAATTGCCACGGCAAGGGGGCGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
CDS-3UTR CAA 90 bp GAAAGAAATAGCTCTGCAGCAAACCCCAGGGTTGTGCAGTTACAGATCAAAATGATGTACATCTCCTCATaGACCTTATCACGCAGGACA +
Preference number: 5 (lower is better)
Translates to: ERNSSAANPRVVQLQIKMMYISS*TLSRRT
Trigger: TGTCCTGCGTGATAAGGTCAATGAGGAGATGTACAT...CATTTTGATCTGTAACTGCACAACCCTGGGGTTTGCTGCAGAGCTATTTCTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
CDS-3UTR CAA 90 bp ATGGGTTTAACTAACAGACTAAGGACATGCACTGATTACAGGACTCTGTCCCAGATGTACATCTCCTCATaGACCTTATCACGCAGGACA +
Preference number: 5 (lower is better)
Translates to: MGLTNRLRTCTDYRTLSQMYISS*TLSRRT
Trigger: TGTCCTGCGTGATAAGGTCAATGAGGAGATGTACAT...CTGGGACAGAGTCCTGTAATCAGTGCATGTCCTTAGTCTGTTAGTTAAACCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
CDS-3UTR CAA 90 bp TTGATGTACTTGCCCTCACATCCATTTACCACCAATGCATACATAGTACATGAAGGAGTCCAGGACCCCTaGCAATCGGAAATCTCTGTA +
Preference number: 5 (lower is better)
Translates to: LMYLPSHPFTTNAYIVHEGVQDP*QSEISV
Trigger: TACAGAGATTTCCGATTGCAAGGGGTCCTGGACTCC...TTCATGTACTATGTATGCATTGGTGGTAAATGGATGTGAGGGCAAGTACATCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
CDS-3UTR CAA 90 bp AATGTACTTGATGTACTTGCCCTCACATCCATTTACCACCAATGCATACATAGTGGAGTCCAGGACCCCTaGCAATCGGAAATCTCTGTA +
Preference number: 5 (lower is better)
Translates to: NVLDVLALTSIYHQCIHSGVQDP*QSEISV
Trigger: TACAGAGATTTCCGATTGCAAGGGGTCCTGGACTCC...ACTATGTATGCATTGGTGGTAAATGGATGTGAGGGCAAGTACATCAAGTACATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
CDS-3UTR CAA 90 bp TCTTGGTACCACATAGCTAAAATGGCAGTTGTATTGATAAACATCTCATGGGCAGATAGGATCGCCCCCTaGCCGTGGCAATTAAGAGAA +
Preference number: 5 (lower is better)
Translates to: SWYHIAKMAVVLINISWADRIAP*PWQLRE
Trigger: TTCTCTTAATTGCCACGGCAAGGGGGCGATCCTATC...TGCCCATGAGATGTTTATCAATACAACTGCCATTTTAGCTATGTGGTACCAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000612439.4
ENST00000613879.4
CDS-3UTR CAA 90 bp TTGATGTACTTGCCCTCACATCCATTTACCACCAATGCATACATAGTACATGAAAAAAGATGCCGAGTGTaGCAAGCTGTCGATGCAGCC +
Preference number: 5 (lower is better)
Translates to: LMYLPSHPFTTNAYIVHEKRCRV*QAVDAA
Trigger: GGCTGCATCGACAGCTTGCAACACTCGGCATCTTTT...TTCATGTACTATGTATGCATTGGTGGTAAATGGATGTGAGGGCAAGTACATCAA
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000383710.9
ENST00000612439.4
CDS-3UTR CAA 90 bp GAAAGAAATAGCTCTGCAGCAAACCCCAGGGTTGTGCAGTTACAGATCAAAATGGGTAGATTTGGTACTTaGGGAAGGTTCACATTGGGT +
Preference number: 5 (lower is better)
Translates to: ERNSSAANPRVVQLQIKMGRFGT*GRFTLG
Trigger: ACCCAATGTGAACCTTCCCAAAGTACCAAATCTACC...CATTTTGATCTGTAACTGCACAACCCTGGGGTTTGCTGCAGAGCTATTTCTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383710.9
ENST00000473635.5
CDS GCA 90 bp AAATGCAATCCTGGTTCTTTTGACACAAGATTCGATCATGTCACTTaGCATCAACTTCAGCCGTTGTTCCAGGTGCTTTCCAAACTCTTC +
Preference number: 5 (lower is better)
Translates to: KCNPGSFDTRFDHVT*HQLQPLFQVLSKLF
Trigger: GAAGAGTTTGGAAAGCACCTGGAACAACGGCTGAAGTTGATGGCAAGTGACATGATCGAATCTTGTGTCAAAAGAACCAGGATTGCATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283269.13
ENST00000357948.7
ENST00000383710.9
ENST00000473635.5
ENST00000478570.5
ENST00000612439.4
CDS-3UTR CAA 90 bp ATTGCTTGTAAACATATAGACATGGACATCAGGAAATCAGTGGATATGAAGGTCTTCTCAATGTGCTTCTaGAAGACCTCCCGGGAGTCG +
Preference number: 5 (lower is better)