RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CADM1 (Homo sapiens)

Ensembl gene IDs: ENSG00000182985

Ensembl transcript IDs: ENST00000331581.11, ENST00000441886.2, ENST00000452722.7, ENST00000536727.5, ENST00000536781.1, ENST00000537058.5, ENST00000537140.5, ENST00000540373.1, ENST00000540852.1, ENST00000540951.1, ENST00000541434.5, ENST00000542447.6, ENST00000542450.5, ENST00000543249.1, ENST00000543375.5, ENST00000543540.5, ENST00000545094.5, ENST00000545380.5, ENST00000545960.5, ENST00000546000.1, ENST00000612235.4, ENST00000616271.4

Found 1026 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCCGCCACGACAGCTCGCACACCTGCACAAATCGCTGAGTCCACGTaGGAGCCCAGACTCAGCCACGGCACAGCACTTGGCTCACCTGTC +
Preference number: 1 (lower is better)
Translates to: PATTARTPAQIAEST*EPRLSHGTALGSPV
Trigger: GACAGGTGAGCCAAGTGCTGTGCCGTGGCTGAGTCTGGGCTCCCACGTGGACTCAGCGATTTGTGCAGGTGTGCGAGCTGTCGTGGCGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
3UTR GCA 90 bp CCCTCTGGCAGAGGCTGGGAGAGGTCACTGAAGTATCGAGTCCTCTaGCCGGACTTTTCAGTACAGCCACAAGACCCATCCCACCCTGCA +
Preference number: 1 (lower is better)
Translates to: PSGRGWERSLKYRVL*PDFSVQPQDPSHPA
Trigger: TGCAGGGTGGGATGGGTCTTGTGGCTGTACTGAAAAGTCCGGGCAGAGGACTCGATACTTCAGTGACCTCTCCCAGCCTCTGCCAGAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
3UTR TCA 90 bp CTCCCTACTGCTCCTTGCCCTCTGGCAGAGGCTGGGAGAGGTCACTaGAGTATCGAGTCCTCTGCCCGGACTTTTCAGTACAGCCACAAG +
Preference number: 1 (lower is better)
Translates to: LPTAPCPLAEAGRGH*SIESSARTFQYSHK
Trigger: CTTGTGGCTGTACTGAAAAGTCCGGGCAGAGGACTCGATACTTCAGTGACCTCTCCCAGCCTCTGCCAGAGGGCAAGGAGCAGTAGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
3UTR GCA 90 bp GTCTGGAGGGCAGCTGAAGTCCCGGGCCCAGAGAACCGGTTGATTTaGCCCTCAGTAGTGGTTCTCACCTTCCCCAGATCAACACTTCGA +
Preference number: 1 (lower is better)
Translates to: VWRAAEVPGPENRLI*PSVVVLTFPRSTLR
Trigger: TCGAAGTGTTGATCTGGGGAAGGTGAGAACCACTACTGAGGGGCAAATCAACCGGTTCTCTGGGCCCGGGACTTCAGCTGCCCTCCAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
3UTR CCA 90 bp TTGAGGCGGTCACGTCTGAAATATGACTGTGAGCCTGTGCACGTCTaGAGGGCAGCTGAAGTCCCGGGCCCAGAGAACCGGTTGATTTGC +
Preference number: 1 (lower is better)
Translates to: LRRSRLKYDCEPVHV*RAAEVPGPENRLIC
Trigger: GCAAATCAACCGGTTCTCTGGGCCCGGGACTTCAGCTGCCCTCCAGACGTGCACAGGCTCACAGTCATATTTCAGACGTGACCGCCTCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
3UTR TCA 90 bp TGCTGTCTACCCAGGCCTGGAAGTCTCAGCAACCTAAACAGCAAGTaGGAACAATCTTCTGCAGGCAGCCAAGCCAGTCCTCCACAGCTC +
Preference number: 1 (lower is better)
Translates to: CCLPRPGSLSNLNSK*EQSSAGSQASPPQL
Trigger: GAGCTGTGGAGGACTGGCTTGGCTGCCTGCAGAAGATTGTTCTCACTTGCTGTTTAGGTTGCTGAGACTTCCAGGCCTGGGTAGACAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
3UTR GCA 90 bp CCTCTGCCCGGACTTTTCAGTACAGCCACAAGACCCATCCCACCCTaGACACGGAATTGCTTTCTTCTCCCCATACAAATCAGCAGGCTG +
Preference number: 1 (lower is better)
Translates to: PLPGLFSTATRPIPP*TRNCFLLPIQISRL
Trigger: CAGCCTGCTGATTTGTATGGGGAGAAGAAAGCAATTCCGTGTGCAGGGTGGGATGGGTCTTGTGGCTGTACTGAAAAGTCCGGGCAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
3UTR CCA 90 bp GCCTTCACTGATTACCCTTCTCCAGAAAATTCTCATAGCACTCTCTaGGCTTCTCTGTGTTCAGTGGGGCACCCATGGCTCAGGGTCACT +
Preference number: 1 (lower is better)
Translates to: AFTDYPSPENSHSTL*ASLCSVGHPWLRVT
Trigger: AGTGACCCTGAGCCATGGGTGCCCCACTGAACACAGAGAAGCCCAGAGAGTGCTATGAGAATTTTCTGGAGAAGGGTAATCAGTGAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
3UTR CCA 90 bp TTTGAGCGGGGACGGCTTCTAGCACCTTCTCATTTGCATACCCTGTaGAGCTCAAAAGGCAAATGTACAGCAGTCACCACCTCCTGTCTG +
Preference number: 1 (lower is better)
Translates to: FERGRLLAPSHLHTL*SSKGKCTAVTTSCL
Trigger: CAGACAGGAGGTGGTGACTGCTGTACATTTGCCTTTTGAGCTCCACAGGGTATGCAAATGAGAAGGTGCTAGAAGCCGTCCCCGCTCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
3UTR TCA 90 bp ATGAAGTGTAGTCATTGCTCACTTCAGCCTGCAAGGCAAGGACGATaGCAACAGAGCAAATCCTGCTGTCTACCCAGGCCTGGAAGTCTC +
Preference number: 1 (lower is better)
Translates to: MKCSHCSLQPARQGR*QQSKSCCLPRPGSL
Trigger: GAGACTTCCAGGCCTGGGTAGACAGCAGGATTTGCTCTGTTGTCATCGTCCTTGCCTTGCAGGCTGAAGTGAGCAATGACTACACTTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
3UTR GCA 90 bp GGGGATGGTGGGAAAAGGGCACTTTGGGCCTGGCCAGACGTTATCTaGACATTTATAAGATCGGCCACCATGAAGTGTAGTCATTGCTCA +
Preference number: 1 (lower is better)
Translates to: GDGGKRALWAWPDVI*TFIRSATMKCSHCS
Trigger: TGAGCAATGACTACACTTCATGGTGGCCGATCTTATAAATGTGCAGATAACGTCTGGCCAGGCCCAAAGTGCCCTTTTCCCACCATCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
3UTR TCA 90 bp CTCTGCTCTGACCTATCGAGAACTGAGAGCGACAGCAGACCAGTGTaGGAACAATACCAGCCCTTCTTTTGTACCTCCTGCCTTTGTCAA +
Preference number: 1 (lower is better)
Translates to: LCSDLSRTESDSRPV*EQYQPFFCTSCLCQ
Trigger: TTGACAAAGGCAGGAGGTACAAAAGAAGGGCTGGTATTGTTCTCACACTGGTCTGCTGTCGCTCTCAGTTCTCGATAGGTCAGAGCAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
3UTR TCA 90 bp GTGTGTCTGGCACCTTTTTGGCTGAGCGCTGACTGCATATCTCACTaGTCTTTCCTAACAACCTTCGAGGCTATGGTGATGTCCACCTTG +
Preference number: 1 (lower is better)
Translates to: VCLAPFWLSADCISH*SFLTTFEAMVMSTL
Trigger: CAAGGTGGACATCACCATAGCCTCGAAGGTTGTTAGGAAAGATCAGTGAGATATGCAGTCAGCGCTCAGCCAAAAAGGTGCCAGACACAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
3UTR TCA 90 bp AAGGCTCAGTCAGCCAGGTGCTCGACTCTTCTCCCTTTAATCAGCTaGTACTTGCTGGGTGACTACTGCGTGCCTGACAGGAACTTTAAT +
Preference number: 1 (lower is better)
Translates to: KAQSARCSTLLPLIS*YLLGDYCVPDRNFN
Trigger: ATTAAAGTTCCTGTCAGGCACGCAGTAGTCACCCAGCAAGTATCAGCTGATTAAAGGGAGAAGAGTCGAGCACCTGGCTGACTGAGCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
3UTR CCA 90 bp GCAAGGACGATGACAACAGAGCAAATCCTGCTGTCTACCCAGGCCTaGAAGTCTCAGCAACCTAAACAGCAAGTGAGAACAATCTTCTGC +
Preference number: 1 (lower is better)
Translates to: ARTMTTEQILLSTQA*KSQQPKQQVRTIFC
Trigger: GCAGAAGATTGTTCTCACTTGCTGTTTAGGTTGCTGAGACTTCCAGGCCTGGGTAGACAGCAGGATTTGCTCTGTTGTCATCGTCCTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
3UTR CCA 90 bp ATTACGTGGTGGGACCAGGACTGTGATGGTGGTGTAACTTTCCTGTaGGGGATCGGTATAGAGCTGGCAAAAGTATCTTCCTTCATCAGA +
Preference number: 1 (lower is better)
Translates to: ITWWDQDCDGGVTFL*GIGIELAKVSSFIR
Trigger: TCTGATGAAGGAAGATACTTTTGCCAGCTCTATACCGATCCCCCACAGGAAAGTTACACCACCATCACAGTCCTGGTCCCACCACGTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540951.1
3UTR TCA 90 bp TGCTGGGTGACTACTGCGTGCCTGACAGGAACTTTAATATGGTATTaGCCTACAAGGTCATGGATGAGCCAAGAGTCCCTTCTTTCTTCT +
Preference number: 1 (lower is better)
Translates to: CWVTTACLTGTLIWY*PTRSWMSQESLLSS
Trigger: AGAAGAAAGAAGGGACTCTTGGCTCATCCATGACCTTGTAGGTCAATACCATATTAAAGTTCCTGTCAGGCACGCAGTAGTCACCCAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
3UTR TCA 90 bp GTTTCCTGTGTACTGAAGAGGCTGGAAGCTGAGGTTTGGAACACCTaGAAACAGAGAAGATTCTTGCTTTCAGGTCTCAGTTCAGGGATG +
Preference number: 1 (lower is better)
Translates to: VSCVLKRLEAEVWNT*KQRRFLLSGLSSGM
Trigger: CATCCCTGAACTGAGACCTGAAAGCAAGAATCTTCTCTGTTTTCAGGTGTTCCAAACCTCAGCTTCCAGCCTCTTCAGTACACAGGAAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
3UTR GCA 90 bp TTCACCCTGAAGGAATGTGGCTGCCAGTTCTTCATGACAAAGGGCTaGGTATTTGGGATCCTGGCAAAAAGGTGTATTAATCTTGGGCAT +
Preference number: 1 (lower is better)
Translates to: FTLKECGCQFFMTKG*VFGILAKRCINLGH
Trigger: ATGCCCAAGATTAATACACCTTTTTGCCAGGATCCCAAATACGCAGCCCTTTGTCATGAAGAACTGGCAGCCACATTCCTTCAGGGTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
3UTR TCA 90 bp TTTGATCCTTATTCTATCTCTCTGGGTCTTTTTATAGAGATGCAATaGATGAGTACTCCCTACTGCTCCTTGCCCTCTGGCAGAGGCTGG +
Preference number: 1 (lower is better)
Translates to: FDPYSISLGLFIEMQ*MSTPYCSLPSGRGW
Trigger: CCAGCCTCTGCCAGAGGGCAAGGAGCAGTAGGGAGTACTCATTCATTGCATCTCTATAAAAAGACCCAGAGAGATAGAATAAGGATCAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
3UTR TCA 90 bp GTCCACAGCGGTAAAAGAATTACATTTCAGGTAGACAGAGGACAGTaGAAGATTGCACCAATTAACACCCGCATATCACCTCAGGGTTCC +
Preference number: 1 (lower is better)
Translates to: VHSGKRITFQVDRGQ*KIAPINTRISPQGS
Trigger: GGAACCCTGAGGTGATATGCGGGTGTTAATTGGTGCAATCTTTCACTGTCCTCTGTCTACCTGAAATGTAATTCTTTTACCGCTGTGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
3UTR GCA 90 bp TTGGTGATCTTGGCTGGGGCTAACGTGACTCAAGGCCCTTCTCGATaGATTGGTGTCTCTGCAAGGAAATCTATTATTTTCCATAAACTG +
Preference number: 1 (lower is better)
Translates to: LVILAGANVTQGPSR*IGVSARKSIIFHKL
Trigger: CAGTTTATGGAAAATAATAGATTTCCTTGCAGAGACACCAATGCATCGAGAAGGGCCTTGAGTCACGTTAGCCCCAGCCAAGATCACCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
3UTR CCA 90 bp GTAAGGATGGACATGCAAACATCAAGGTTTGAAATACAGCATCGGTaGCCCATTCAGATTAAGTGTAACGTAAGGCTCAGTCAGCCAGGT +
Preference number: 1 (lower is better)
Translates to: VRMDMQTSRFEIQHR*PIQIKCNVRLSQPG
Trigger: ACCTGGCTGACTGAGCCTTACGTTACACTTAATCTGAATGGGCCACCGATGCTGTATTTCAAACCTTGATGTTTGCATGTCCATCCTTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
3UTR CCA 90 bp CATGTTCCTAATTGCAACACTATAGCTGCCCTCATCACTTTATTCTaGGAGAGGAGGTTAGAGAAAACAGGCCTAGAGAGAGGGAGAGAA +
Preference number: 1 (lower is better)
Translates to: HVPNCNTIAALITLF*ERRLEKTGLERGRE
Trigger: TTCTCTCCCTCTCTCTAGGCCTGTTTTCTCTAACCTCCTCTCCCAGAATAAAGTGATGAGGGCAGCTATAGTGTTGCAATTAGGAACATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
3UTR TCA 90 bp ATACCAGCCCTTCTTTTGTACCTCCTGCCTTTGTCAAGCCAAATCTaGAGGAATGAAAGTTTCACACAGATTCGAGTTGGAAATCCCAGC +
Preference number: 1 (lower is better)
Translates to: IPALLLYLLPLSSQI*RNESFTQIRVGNPS
Trigger: GCTGGGATTTCCAACTCGAATCTGTGTGAAACTTTCATTCCTTCAGATTTGGCTTGACAAAGGCAGGAGGTACAAAAGAAGGGCTGGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
3UTR TCA 90 bp GGACAGGGATCTGAATGCAGGCAGCCTCTCTCTAGTGTGTGCTTTTaGTCCTTATTCTATCTCTCTGGGTCTTTTTATAGAGATGCAATG +
Preference number: 1 (lower is better)
Translates to: GQGSECRQPLSSVCF*SLFYLSGSFYRDAM
Trigger: CATTGCATCTCTATAAAAAGACCCAGAGAGATAGAATAAGGATCAAAAGCACACACTAGAGAGAGGCTGCCTGCATTCAGATCCCTGTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
3UTR TCA 90 bp GCAATACTAAGGCTTTGCTTGGCCATTACCCAAAATGATATTCCCTaGTACTATTCCAGTGGGTCCTTGAGAATGATAGGGCCAATCGCT +
Preference number: 1 (lower is better)
Translates to: AILRLCLAITQNDIP*YYSSGSLRMIGPIA
Trigger: AGCGATTGGCCCTATCATTCTCAAGGACCCACTGGAATAGTATCAGGGAATATCATTTTGGGTAATGGCCAAGCAAAGCCTTAGTATTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
3UTR TCA 90 bp CCTTCTTTTGTACCTCCTGCCTTTGTCAAGCCAAATCTGAAGGAATaGAAGTTTCACACAGATTCGAGTTGGAAATCCCAGCATGACAAA +
Preference number: 1 (lower is better)
Translates to: PSFVPPAFVKPNLKE*KFHTDSSWKSQHDK
Trigger: TTTGTCATGCTGGGATTTCCAACTCGAATCTGTGTGAAACTTTCATTCCTTCAGATTTGGCTTGACAAAGGCAGGAGGTACAAAAGAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
3UTR TCA 90 bp AAGATTGCACCAATTAACACCCGCATATCACCTCAGGGTTCCAGTTaGTGTATTTGGAGAATGCCAGGCCAAAACATTTGTGAAAACTCT +
Preference number: 1 (lower is better)
Translates to: KIAPINTRISPQGSS*CIWRMPGQNICENS
Trigger: AGAGTTTTCACAAATGTTTTGGCCTGGCATTCTCCAAATACATCAACTGGAACCCTGAGGTGATATGCGGGTGTTAATTGGTGCAATCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
3UTR CCA 90 bp GCTTTTTCCTACAAATTAGTGAGAAGTAAGGCCGATTGGGAAAGGTaGATGGAATCATTTGGAACAGAAACAACCAGAGCAGAACTGTAT +
Preference number: 1 (lower is better)
Translates to: AFSYKLVRSKADWER*MESFGTETTRAELY
Trigger: ATACAGTTCTGCTCTGGTTGTTTCTGTTCCAAATGATTCCATCCACCTTTCCCAATCGGCCTTACTTCTCACTAATTTGTAGGAAAAAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
3UTR CCA 90 bp CAAAAATACCTTCACTTAAGCAGGGTCTTTCTACCTGTAACACAGTaGCCACATGGTTTCTTTGAGGTTCTTGATGACAGAATCAAAGGA +
Preference number: 1 (lower is better)
Translates to: QKYLHLSRVFLPVTQ*PHGFFEVLDDRIKG
Trigger: TCCTTTGATTCTGTCATCAAGAACCTCAAAGAAACCATGTGGCCACTGTGTTACAGGTAGAAAGACCCTGCTTAAGTGAAGGTATTTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
3UTR TCA 90 bp GAAGGAATGAAAGTTTCACACAGATTCGAGTTGGAAATCCCAGCATaGCAAATATCTGTAATATACAGTACATGCAGGCCACATCCTACT +
Preference number: 1 (lower is better)
Translates to: EGMKVSHRFELEIPA*QISVIYSTCRPHPT
Trigger: AGTAGGATGTGGCCTGCATGTACTGTATATTACAGATATTTGTCATGCTGGGATTTCCAACTCGAATCTGTGTGAAACTTTCATTCCTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
3UTR GCA 90 bp AAGATATGTTCAAGGTCACTGATTTTAGTAGCTATGCACTATGGCTaGCATCATGCGAGGATCAGTAATTTTTGGCAGATGGTTCTTAAG +
Preference number: 1 (lower is better)
Translates to: KICSRSLILVAMHYG*HHARISNFWQMVLK
Trigger: CTTAAGAACCATCTGCCAAAAATTACTGATCCTCGCATGATGGCAGCCATAGTGCATAGCTACTAAAATCAGTGACCTTGAACATATCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
3UTR TCA 90 bp TCTGAATCACAGTCTAATTTTCTAGTCTTCACTGCTCTAAGTATTTaGAACATGGGCAGCAGCAAAGAGTTTTCATTGTTTGTTCACCCA +
Preference number: 1 (lower is better)
Translates to: SESQSNFLVFTALSI*NMGSSKEFSLFVHP
Trigger: TGGGTGAACAAACAATGAAAACTCTTTGCTGCTGCCCATGTTTCAAATACTTAGAGCAGTGAAGACTAGAAAATTAGACTGTGATTCAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
3UTR CCA 90 bp GGTATACATGAACCAATACAAAATGCGAATGGGAACATATGGATATaGAGTTTCTTACACTGTAACATTGTCCATGTACACCTTAAAAAC +
Preference number: 1 (lower is better)
Translates to: GIHEPIQNANGNIWI*SFLHCNIVHVHLKN
Trigger: GTTTTTAAGGTGTACATGGACAATGTTACAGTGTAAGAAACTCCATATCCATATGTTCCCATTCGCATTTTGTATTGGTTCATGTATACC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000542447.6
3UTR-3UTR TCA 90 bp ATGACTGTGAGCCTGTGCACGTCTGGAGGGCAGCTGAAGTCCCGGGCCCAGAGAGGTGGGACAGGGATCTaGATGCAGGCAGCCTCTCTC +
Preference number: 2 (lower is better)
Translates to: MTVSLCTSGGQLKSRAQRGGTGI*MQAASL
Trigger: GAGAGAGGCTGCCTGCATTCAGATCCCTGTCCCACC...TCTCTGGGCCCGGGACTTCAGCTGCCCTCCAGACGTGCACAGGCTCACAGTCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
3UTR-3UTR GCA 90 bp ATGACTGTGAGCCTGTGCACGTCTGGAGGGCAGCTGAAGTCCCGGGCCCAGAGAGTGGGGCCTACACTTTaGAATCTACCTGAGACGGAA +
Preference number: 2 (lower is better)
Translates to: MTVSLCTSGGQLKSRAQRVGPTL*NLPETE
Trigger: TTCCGTCTCAGGTAGATTGCAAAGTGTAGGCCCCAC...TCTCTGGGCCCGGGACTTCAGCTGCCCTCCAGACGTGCACAGGCTCACAGTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
3UTR-3UTR TCA 90 bp TTTGCATACCCTGTGGAGCTCAAAAGGCAAATGTACAGCAGTCACCACCTCCTGACCTGCACAAATCGCTaGGTCCACGTGGGAGCCCAG +
Preference number: 2 (lower is better)
Translates to: FAYPVELKRQMYSSHHLLTCTNR*VHVGAQ
Trigger: CTGGGCTCCCACGTGGACTCAGCGATTTGTGCAGGT...CAGGAGGTGGTGACTGCTGTACATTTGCCTTTTGAGCTCCACAGGGTATGCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
3UTR-3UTR TCA 90 bp ACTCTCTGGGGGAAACGAGGGCCATTTTCACTCTCGTACGCACTCTTCTCAAATGGTGGGACAGGGATCTaGATGCAGGCAGCCTCTCTC +
Preference number: 2 (lower is better)
Translates to: TLWGKRGPFSLSYALFSNGGTGI*MQAASL
Trigger: GAGAGAGGCTGCCTGCATTCAGATCCCTGTCCCACC...ATTTGAGAAGAGTGCGTACGAGAGTGAAAATGGCCCTCGTTTCCCCCAGAGAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
3UTR-3UTR TCA 90 bp ATGACTGTGAGCCTGTGCACGTCTGGAGGGCAGCTGAAGTCCCGGGCCCAGAGAGAGGTTTGGAACACCTaGAAACAGAGAAGATTCTTG +
Preference number: 2 (lower is better)
Translates to: MTVSLCTSGGQLKSRAQREVWNT*KQRRFL
Trigger: CAAGAATCTTCTCTGTTTTCAGGTGTTCCAAACCTC...TCTCTGGGCCCGGGACTTCAGCTGCCCTCCAGACGTGCACAGGCTCACAGTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
3UTR-3UTR CCA 90 bp GTCCTTGAGAATGATAGGGCCAATCGCTCTAAACTCAGGACTGGCTGGCTTGTCCAGCTGAGGGGATGGTaGGAAAAGGGCACTTTGGGC +
Preference number: 2 (lower is better)
Translates to: VLENDRANRSKLRTGWLVQLRGW*EKGTLG
Trigger: GCCCAAAGTGCCCTTTTCCCACCATCCCCTCAGCTG...GACAAGCCAGCCAGTCCTGAGTTTAGAGCGATTGGCCCTATCATTCTCAAGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
3UTR CAA 90 bp GGAACTCATCAACCACAGCTGAGGGGATGGTGGGAAAAGGGCACTTaGGGCCTGGCCAGACGTTATCTGCACATTTATAAGATCGGCCAC +
Preference number: 2 (lower is better)
Translates to: GTHQPQLRGWWEKGT*GLARRYLHIYKIGH
Trigger: GTGGCCGATCTTATAAATGTGCAGATAACGTCTGGCCAGGCCCAAAGTGCCCTTTTCCCACCATCCCCTCAGCTGTGGTTGATGAGTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
3UTR-3UTR CCA 90 bp ACTGAAGTATCGAGTCCTCTGCCCGGACTTTTCAGTACAGCCACAAGACCCATCGGGAAAAGGGCACTTTaGGCCTGGCCAGACGTTATC +
Preference number: 2 (lower is better)
Translates to: TEVSSPLPGLFSTATRPIGKRAL*AWPDVI
Trigger: GATAACGTCTGGCCAGGCCCAAAGTGCCCTTTTCCC...GATGGGTCTTGTGGCTGTACTGAAAAGTCCGGGCAGAGGACTCGATACTTCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
3UTR-3UTR CCA 90 bp GTCCTTGAGAATGATAGGGCCAATCGCTCTAAACTCAGGACTGGCTGGCTTGTCAATCAGCAGGCTGGCTaGGCTTGTTGCCCTCTGTAC +
Preference number: 2 (lower is better)
Translates to: VLENDRANRSKLRTGWLVNQQAG*ACCPLY
Trigger: GTACAGAGGGCAACAAGCCCAGCCAGCCTGCTGATT...GACAAGCCAGCCAGTCCTGAGTTTAGAGCGATTGGCCCTATCATTCTCAAGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
3UTR-3UTR CCA 90 bp ATGACTGTGAGCCTGTGCACGTCTGGAGGGCAGCTGAAGTCCCGGGCCCAGAGAGCGTATTTGGGATCCTaGCAAAAAGGTGTATTAATC +
Preference number: 2 (lower is better)
Translates to: MTVSLCTSGGQLKSRAQRAYLGS*QKGVLI
Trigger: GATTAATACACCTTTTTGCCAGGATCCCAAATACGC...TCTCTGGGCCCGGGACTTCAGCTGCCCTCCAGACGTGCACAGGCTCACAGTCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
3UTR-3UTR TCA 90 bp ACTCTCTGGGGGAAACGAGGGCCATTTTCACTCTCGTACGCACTCTTCTCAAATGGTCCCAGCTCTTTGTaGAGCTGTCTAGGGACTCAC +
Preference number: 2 (lower is better)
Translates to: TLWGKRGPFSLSYALFSNGPSSL*SCLGTH
Trigger: GTGAGTCCCTAGACAGCTTCACAAAGAGCTGGGACC...ATTTGAGAAGAGTGCGTACGAGAGTGAAAATGGCCCTCGTTTCCCCCAGAGAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
3UTR-3UTR GCA 90 bp GTCCTTGAGAATGATAGGGCCAATCGCTCTAAACTCAGGACTGGCTGGCTTGTCATGAGTACTCCCTACTaGTCCTTGCCCTCTGGCAGA +
Preference number: 2 (lower is better)
Translates to: VLENDRANRSKLRTGWLVMSTPY*SLPSGR
Trigger: TCTGCCAGAGGGCAAGGAGCAGTAGGGAGTACTCAT...GACAAGCCAGCCAGTCCTGAGTTTAGAGCGATTGGCCCTATCATTCTCAAGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
3UTR-3UTR CCA 90 bp ATGACTGTGAGCCTGTGCACGTCTGGAGGGCAGCTGAAGTCCCGGGCCCAGAGAGTAATTTTTGGCAGATaGTTCTTAAGGCTGAGGAAA +
Preference number: 2 (lower is better)
Translates to: MTVSLCTSGGQLKSRAQRVIFGR*FLRLRK
Trigger: TTTCCTCAGCCTTAAGAACCATCTGCCAAAAATTAC...TCTCTGGGCCCGGGACTTCAGCTGCCCTCCAGACGTGCACAGGCTCACAGTCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
3UTR-3UTR TCA 90 bp ACTGAAGTATCGAGTCCTCTGCCCGGACTTTTCAGTACAGCCACAAGACCCATCGGGAGGTCCCAAAAATaGGATGCCAATTCTGTGAGC +
Preference number: 2 (lower is better)
Translates to: TEVSSPLPGLFSTATRPIGRSQK*DANSVS
Trigger: GCTCACAGAATTGGCATCTCATTTTTGGGACCTCCC...GATGGGTCTTGTGGCTGTACTGAAAAGTCCGGGCAGAGGACTCGATACTTCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
3UTR-3UTR TCA 90 bp ACTCTCTGGGGGAAACGAGGGCCATTTTCACTCTCGTACGCACTCTTCTCAAATCTTATCAAGATCCTTTaGGCGGGGACGGCTTCTAGC +
Preference number: 2 (lower is better)
Translates to: TLWGKRGPFSLSYALFSNLIKIL*AGTASS
Trigger: GCTAGAAGCCGTCCCCGCTCAAAGGATCTTGATAAG...ATTTGAGAAGAGTGCGTACGAGAGTGAAAATGGCCCTCGTTTCCCCCAGAGAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
3UTR-3UTR GCA 90 bp TTTGCATACCCTGTGGAGCTCAAAAGGCAAATGTACAGCAGTCACCACCTCCTGGTGAGAACAATCTTCTaGAGGCAGCCAAGCCAGTCC +
Preference number: 2 (lower is better)
Translates to: FAYPVELKRQMYSSHHLLVRTIF*RQPSQS
Trigger: GGACTGGCTTGGCTGCCTGCAGAAGATTGTTCTCAC...CAGGAGGTGGTGACTGCTGTACATTTGCCTTTTGAGCTCCACAGGGTATGCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
3UTR-3UTR GCA 90 bp ACTCTCTGGGGGAAACGAGGGCCATTTTCACTCTCGTACGCACTCTTCTCAAATCAACAGAGCAAATCCTaGTGTCTACCCAGGCCTGGA +
Preference number: 2 (lower is better)
Translates to: TLWGKRGPFSLSYALFSNQQSKS*CLPRPG
Trigger: TCCAGGCCTGGGTAGACAGCAGGATTTGCTCTGTTG...ATTTGAGAAGAGTGCGTACGAGAGTGAAAATGGCCCTCGTTTCCCCCAGAGAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
3UTR-3UTR TCA 90 bp GTCCTTGAGAATGATAGGGCCAATCGCTCTAAACTCAGGACTGGCTGGCTTGTCGCAAACATCAAGGTTTaGAATACAGCATCGGTGGCC +
Preference number: 2 (lower is better)
Translates to: VLENDRANRSKLRTGWLVANIKV*NTASVA
Trigger: GGCCACCGATGCTGTATTTCAAACCTTGATGTTTGC...GACAAGCCAGCCAGTCCTGAGTTTAGAGCGATTGGCCCTATCATTCTCAAGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
3UTR-3UTR GCA 90 bp ACTCTCTGGGGGAAACGAGGGCCATTTTCACTCTCGTACGCACTCTTCTCAAATAGGAGGAGTCCTTTCTaGCCCAAACCTTTCTGGACA +
Preference number: 2 (lower is better)
Translates to: TLWGKRGPFSLSYALFSNRRSPF*PKPFWT
Trigger: TGTCCAGAAAGGTTTGGGGCAGAAAGGACTCCTCCT...ATTTGAGAAGAGTGCGTACGAGAGTGAAAATGGCCCTCGTTTCCCCCAGAGAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
3UTR-3UTR GCA 90 bp GACTCCTCTACCTTTTCCCGAGGCTCCCCATCTAAGATATGTTCAAGGTCACTGAGGAGGAGTCCTTTCTaGCCCAAACCTTTCTGGACA +
Preference number: 2 (lower is better)
Translates to: DSSTFSRGSPSKICSRSLRRSPF*PKPFWT
Trigger: TGTCCAGAAAGGTTTGGGGCAGAAAGGACTCCTCCT...CAGTGACCTTGAACATATCTTAGATGGGGAGCCTCGGGAAAAGGTAGAGGAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
3UTR-3UTR GCA 90 bp CTGGGGTCCCAGCTCTTTGTGAAGCTGTCTAGGGACTCACCAGCCTTCACTGATCTGAAAATCCGTACATaGTGTTTTTCCACCTCTGCT +
Preference number: 2 (lower is better)
Translates to: LGSQLFVKLSRDSPAFTDLKIRT*CFSTSA
Trigger: AGCAGAGGTGGAAAAACAGCATGTACGGATTTTCAG...ATCAGTGAAGGCTGGTGAGTCCCTAGACAGCTTCACAAAGAGCTGGGACCCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
3UTR-3UTR GCA 90 bp ACTCTCTGGGGGAAACGAGGGCCATTTTCACTCTCGTACGCACTCTTCTCAAATGTGGGGCCTACACTTTaGAATCTACCTGAGACGGAA +
Preference number: 2 (lower is better)
Translates to: TLWGKRGPFSLSYALFSNVGPTL*NLPETE
Trigger: TTCCGTCTCAGGTAGATTGCAAAGTGTAGGCCCCAC...ATTTGAGAAGAGTGCGTACGAGAGTGAAAATGGCCCTCGTTTCCCCCAGAGAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
3UTR-3UTR CCA 90 bp ACTGAAGTATCGAGTCCTCTGCCCGGACTTTTCAGTACAGCCACAAGACCCATCATACTATGGTCGGAATaGGTGCTAAGGGCTCGGAAT +
Preference number: 2 (lower is better)
Translates to: TEVSSPLPGLFSTATRPIILWSE*VLRARN
Trigger: ATTCCGAGCCCTTAGCACCCATTCCGACCATAGTAT...GATGGGTCTTGTGGCTGTACTGAAAAGTCCGGGCAGAGGACTCGATACTTCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
3UTR-3UTR CCA 90 bp GTCCTTGAGAATGATAGGGCCAATCGCTCTAAACTCAGGACTGGCTGGCTTGTCAAAGGGCTGCGTATTTaGGATCCTGGCAAAAAGGTG +
Preference number: 2 (lower is better)
Translates to: VLENDRANRSKLRTGWLVKGLRI*DPGKKV
Trigger: CACCTTTTTGCCAGGATCCCAAATACGCAGCCCTTT...GACAAGCCAGCCAGTCCTGAGTTTAGAGCGATTGGCCCTATCATTCTCAAGGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
3UTR CAA 90 bp TTATCAAGATCCTTTGAGCGGGGACGGCTTCTAGCACCTTCTCATTaGCATACCCTGTGGAGCTCAAAAGGCAAATGTACAGCAGTCACC +
Preference number: 2 (lower is better)
Translates to: LSRSFERGRLLAPSH*HTLWSSKGKCTAVT
Trigger: GGTGACTGCTGTACATTTGCCTTTTGAGCTCCACAGGGTATGCAAATGAGAAGGTGCTAGAAGCCGTCCCCGCTCAAAGGATCTTGATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
3UTR-3UTR TCA 90 bp TCCTCTACCTTTTCCCGAGGCTCCCCATCTAAGATATGTTCAAGGTCACTGATTGACAGCAGACCAGTGTaGGAACAATACCAGCCCTTC +
Preference number: 2 (lower is better)
Translates to: SSTFSRGSPSKICSRSLIDSRPV*EQYQPF
Trigger: GAAGGGCTGGTATTGTTCTCACACTGGTCTGCTGTC...AATCAGTGACCTTGAACATATCTTAGATGGGGAGCCTCGGGAAAAGGTAGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
3UTR-3UTR TCA 90 bp ACTCTCTGGGGGAAACGAGGGCCATTTTCACTCTCGTACGCACTCTTCTCAAATTGCCCTCTGTACTTTTaGCTCACATTCCTTCTCCAC +
Preference number: 2 (lower is better)
Translates to: TLWGKRGPFSLSYALFSNCPLYF*LTFLLH
Trigger: GTGGAGAAGGAATGTGAGTCAAAAGTACAGAGGGCA...ATTTGAGAAGAGTGCGTACGAGAGTGAAAATGGCCCTCGTTTCCCCCAGAGAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
3UTR-3UTR TCA 90 bp GACTCCTCTACCTTTTCCCGAGGCTCCCCATCTAAGATATGTTCAAGGTCACTGGTAGGGTATCTATACTaGGCCGTCTACAGATACAGA +
Preference number: 2 (lower is better)
Translates to: DSSTFSRGSPSKICSRSLVGYLY*AVYRYR
Trigger: TCTGTATCTGTAGACGGCTCAGTATAGATACCCTAC...CAGTGACCTTGAACATATCTTAGATGGGGAGCCTCGGGAAAAGGTAGAGGAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
3UTR-3UTR TCA 90 bp ATACTATGGTCGGAATGGGTGCTAAGGGCTCGGAATAGAGCTGCAGATTATAAAGACAGCAGACCAGTGTaGGAACAATACCAGCCCTTC +
Preference number: 2 (lower is better)
Translates to: ILWSEWVLRARNRAADYKDSRPV*EQYQPF
Trigger: GAAGGGCTGGTATTGTTCTCACACTGGTCTGCTGTC...TTTATAATCTGCAGCTCTATTCCGAGCCCTTAGCACCCATTCCGACCATAGTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
3UTR-3UTR TCA 90 bp TTTGCATACCCTGTGGAGCTCAAAAGGCAAATGTACAGCAGTCACCACCTCCTGACTTTGCAATCTACCTaGGACGGAAAACACCAATCG +
Preference number: 2 (lower is better)
Translates to: FAYPVELKRQMYSSHHLLTLQST*DGKHQS
Trigger: CGATTGGTGTTTTCCGTCTCAGGTAGATTGCAAAGT...CAGGAGGTGGTGACTGCTGTACATTTGCCTTTTGAGCTCCACAGGGTATGCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
3UTR-3UTR TCA 90 bp TGTGATGGTGGTGTAACTTTCCTGTGGGGGATCGGTATAGAGCTGGCAAAAGTATTGGGATTCAGTAGCTaGATCACAGAGTCGTCACTC +
Preference number: 2 (lower is better)
Translates to: CDGGVTFLWGIGIELAKVLGFSS*ITESSL
Trigger: GAGTGACGACTCTGTGATTCAGCTACTGAATCCCAA...TACTTTTGCCAGCTCTATACCGATCCCCCACAGGAAAGTTACACCACCATCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540951.1
3UTR-3UTR GCA 90 bp TCCTCTACCTTTTCCCGAGGCTCCCCATCTAAGATATGTTCAAGGTCACTGATTGCTATGCACTATGGCTaGCATCATGCGAGGATCAGT +
Preference number: 2 (lower is better)
Translates to: SSTFSRGSPSKICSRSLIAMHYG*HHARIS
Trigger: ACTGATCCTCGCATGATGGCAGCCATAGTGCATAGC...AATCAGTGACCTTGAACATATCTTAGATGGGGAGCCTCGGGAAAAGGTAGAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
3UTR-3UTR CCA 90 bp TTTGCATACCCTGTGGAGCTCAAAAGGCAAATGTACAGCAGTCACCACCTCCTGGGTCTGTTTAGGGCATaGAAAAAGGAGGAGTCCTTT +
Preference number: 2 (lower is better)
Translates to: FAYPVELKRQMYSSHHLLGLFRA*KKEESF
Trigger: AAAGGACTCCTCCTTTTTCCATGCCCTAAACAGACC...CAGGAGGTGGTGACTGCTGTACATTTGCCTTTTGAGCTCCACAGGGTATGCAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
3UTR-3UTR CCA 90 bp GTCCTTGAGAATGATAGGGCCAATCGCTCTAAACTCAGGACTGGCTGGCTTGTCCTGTTAGCTGGAGTCTaGAGTCTTACCAAACATATG +
Preference number: 2 (lower is better)
Translates to: VLENDRANRSKLRTGWLVLLAGV*SLTKHM
Trigger: CATATGTTTGGTAAGACTCCAGACTCCAGCTAACAG...GACAAGCCAGCCAGTCCTGAGTTTAGAGCGATTGGCCCTATCATTCTCAAGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
3UTR-3UTR CCA 90 bp CTGGGGTCCCAGCTCTTTGTGAAGCTGTCTAGGGACTCACCAGCCTTCACTGATGGGAACATATGGATATaGAGTTTCTTACACTGTAAC +
Preference number: 2 (lower is better)
Translates to: LGSQLFVKLSRDSPAFTDGNIWI*SFLHCN
Trigger: GTTACAGTGTAAGAAACTCCATATCCATATGTTCCC...ATCAGTGAAGGCTGGTGAGTCCCTAGACAGCTTCACAAAGAGCTGGGACCCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
3UTR CAA 90 bp TTGCTGGGTGACTACTGCGTGCCTGACAGGAACTTTAATATGGTATaGACCTACAAGGTCATGGATGAGCCAAGAGTCCCTTCTTTCTTC +
Preference number: 2 (lower is better)
Translates to: LLGDYCVPDRNFNMV*TYKVMDEPRVPSFF
Trigger: GAAGAAAGAAGGGACTCTTGGCTCATCCATGACCTTGTAGGTCAATACCATATTAAAGTTCCTGTCAGGCACGCAGTAGTCACCCAGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
3UTR-3UTR GCA 90 bp CCCTTTGATATGATTATACTATGGTCGGAATGGGTGCTAAGGGCTCGGAATAGAAGGAGGAGTCCTTTCTaGCCCAAACCTTTCTGGACA +
Preference number: 2 (lower is better)
Translates to: PFDMIILWSEWVLRARNRRRSPF*PKPFWT
Trigger: TGTCCAGAAAGGTTTGGGGCAGAAAGGACTCCTCCT...TCTATTCCGAGCCCTTAGCACCCATTCCGACCATAGTATAATCATATCAAAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
3UTR-3UTR GCA 90 bp ATACTATGGTCGGAATGGGTGCTAAGGGCTCGGAATAGAGCTGCAGATTATAAAAGGAGGAGTCCTTTCTaGCCCAAACCTTTCTGGACA +
Preference number: 2 (lower is better)
Translates to: ILWSEWVLRARNRAADYKRRSPF*PKPFWT
Trigger: TGTCCAGAAAGGTTTGGGGCAGAAAGGACTCCTCCT...TTTATAATCTGCAGCTCTATTCCGAGCCCTTAGCACCCATTCCGACCATAGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
3UTR-3UTR GCA 90 bp GACTCCTCTACCTTTTCCCGAGGCTCCCCATCTAAGATATGTTCAAGGTCACTGCTGAAAATCCGTACATaGTGTTTTTCCACCTCTGCT +
Preference number: 2 (lower is better)
Translates to: DSSTFSRGSPSKICSRSLLKIRT*CFSTSA
Trigger: AGCAGAGGTGGAAAAACAGCATGTACGGATTTTCAG...CAGTGACCTTGAACATATCTTAGATGGGGAGCCTCGGGAAAAGGTAGAGGAGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
3UTR-3UTR GCA 90 bp ACTCTCTGGGGGAAACGAGGGCCATTTTCACTCTCGTACGCACTCTTCTCAAATGTTTTAGTCACCATTTaGCTCTATCCTGTGACTGAC +
Preference number: 2 (lower is better)
Translates to: TLWGKRGPFSLSYALFSNVLVTI*LYPVTD
Trigger: GTCAGTCACAGGATAGAGGCAAATGGTGACTAAAAC...ATTTGAGAAGAGTGCGTACGAGAGTGAAAATGGCCCTCGTTTCCCCCAGAGAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
3UTR-3UTR CCA 90 bp TTTGCATACCCTGTGGAGCTCAAAAGGCAAATGTACAGCAGTCACCACCTCCTGCACACAGATTCGAGTTaGAAATCCCAGCATGACAAA +
Preference number: 2 (lower is better)
Translates to: FAYPVELKRQMYSSHHLLHTDSS*KSQHDK
Trigger: TTTGTCATGCTGGGATTTCCAACTCGAATCTGTGTG...CAGGAGGTGGTGACTGCTGTACATTTGCCTTTTGAGCTCCACAGGGTATGCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
3UTR-3UTR TCA 90 bp AGGAACAGACCTCACCTGTCAGGTCTGTTTAGGGCATGGAAAAAGGAGGAGTCCCTAAATTCTGAACTATaGAATCTAAGCTGTGCTGGT +
Preference number: 2 (lower is better)
Translates to: RNRPHLSGLFRAWKKEESLNSEL*NLSCAG
Trigger: ACCAGCACAGCTTAGATTTCATAGTTCAGAATTTAG...GGACTCCTCCTTTTTCCATGCCCTAAACAGACCTGACAGGTGAGGTCTGTTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
3UTR-3UTR TCA 90 bp TGGAAAAAGGAGGAGTCCTTTCTGCCCCAAACCTTTCTGGACAGCGTAGGGTATAATTCAATCTCATTGTaGCACACCTCACTTGCAGAT +
Preference number: 2 (lower is better)
Translates to: WKKEESFLPQTFLDSVGYNSISL*HTSLAD
Trigger: ATCTGCAAGTGAGGTGTGTCACAATGAGATTGAATT...ATACCCTACGCTGTCCAGAAAGGTTTGGGGCAGAAAGGACTCCTCCTTTTTCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
3UTR-3UTR TCA 90 bp GTCCTTGAGAATGATAGGGCCAATCGCTCTAAACTCAGGACTGGCTGGCTTGTCTCTCACCCTTTGATATaGTTATACTATGGTCGGAAT +
Preference number: 2 (lower is better)
Translates to: VLENDRANRSKLRTGWLVSHPLI*LYYGRN
Trigger: ATTCCGACCATAGTATAATCATATCAAAGGGTGAGA...GACAAGCCAGCCAGTCCTGAGTTTAGAGCGATTGGCCCTATCATTCTCAAGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
3UTR-3UTR TCA 90 bp GTCCTTGAGAATGATAGGGCCAATCGCTCTAAACTCAGGACTGGCTGGCTTGTCCACGTCTTCTTTTTATaGAAGGAGAGAGAACTTTCA +
Preference number: 2 (lower is better)
Translates to: VLENDRANRSKLRTGWLVHVFFL*KERELS
Trigger: TGAAAGTTCTCTCTCCTTTCATAAAAAGAAGACGTG...GACAAGCCAGCCAGTCCTGAGTTTAGAGCGATTGGCCCTATCATTCTCAAGGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
3UTR-3UTR TCA 90 bp ACTCTCTGGGGGAAACGAGGGCCATTTTCACTCTCGTACGCACTCTTCTCAAATTTTGCCTCTATCCTGTaGCTGACATGTAATGAACAA +
Preference number: 2 (lower is better)
Translates to: TLWGKRGPFSLSYALFSNFASIL*LTCNEQ
Trigger: TTGTTCATTACATGTCAGTCACAGGATAGAGGCAAA...ATTTGAGAAGAGTGCGTACGAGAGTGAAAATGGCCCTCGTTTCCCCCAGAGAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
3UTR-3UTR TCA 90 bp CTTCCACCGCAGTGTCTTTCTGGATATCGATCATCAGATTACGTGGTGGGACCAGAAAAATTCAGCAACTaGAACCTGCTGTCCTTCAAA +
Preference number: 2 (lower is better)
Translates to: LPPQCLSGYRSSDYVVGPEKFSN*NLLSFK
Trigger: TTTGAAGGACAGCAGGTTTCAGTTGCTGAATTTTTC...TGGTCCCACCACGTAATCTGATGATCGATATCCAGAAAGACACTGCGGTGGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540951.1
3UTR-3UTR GCA 90 bp TCCTCTACCTTTTCCCGAGGCTCCCCATCTAAGATATGTTCAAGGTCACTGATTGTAATATACAGTACATaGAGGCCACATCCTACTGCC +
Preference number: 2 (lower is better)
Translates to: SSTFSRGSPSKICSRSLIVIYST*RPHPTA
Trigger: GGCAGTAGGATGTGGCCTGCATGTACTGTATATTAC...AATCAGTGACCTTGAACATATCTTAGATGGGGAGCCTCGGGAAAAGGTAGAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
3UTR-3UTR GCA 90 bp TCCTCTACCTTTTCCCGAGGCTCCCCATCTAAGATATGTTCAAGGTCACTGATTCTGTTTTTCCACCTCTaGTCTGACCTATCGAGAACT +
Preference number: 2 (lower is better)
Translates to: SSTFSRGSPSKICSRSLILFFHL*SDLSRT
Trigger: AGTTCTCGATAGGTCAGAGCAGAGGTGGAAAAACAG...AATCAGTGACCTTGAACATATCTTAGATGGGGAGCCTCGGGAAAAGGTAGAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
3UTR-3UTR CCA 90 bp AGTGTGAGAACAATACCAGCCCTTCTTTTGTACCTCCTGCCTTTGTCAAGCCAAGCCGATTGGGAAAGGTaGATGGAATCATTTGGAACA +
Preference number: 2 (lower is better)
Translates to: SVRTIPALLLYLLPLSSQADWER*MESFGT
Trigger: TGTTCCAAATGATTCCATCCACCTTTCCCAATCGGC...TTGGCTTGACAAAGGCAGGAGGTACAAAAGAAGGGCTGGTATTGTTCTCACACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
3UTR-3UTR CCA 90 bp GTCCTTGAGAATGATAGGGCCAATCGCTCTAAACTCAGGACTGGCTGGCTTGTCGTAATTTTTGGCAGATaGTTCTTAAGGCTGAGGAAA +
Preference number: 2 (lower is better)
Translates to: VLENDRANRSKLRTGWLVVIFGR*FLRLRK
Trigger: TTTCCTCAGCCTTAAGAACCATCTGCCAAAAATTAC...GACAAGCCAGCCAGTCCTGAGTTTAGAGCGATTGGCCCTATCATTCTCAAGGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
3UTR-3UTR CCA 90 bp ATACTATGGTCGGAATGGGTGCTAAGGGCTCGGAATAGAGCTGCAGATTATAAAAGTAGCTATGCACTATaGCTGCCATCATGCGAGGAT +
Preference number: 2 (lower is better)
Translates to: ILWSEWVLRARNRAADYKSSYAL*LPSCED
Trigger: ATCCTCGCATGATGGCAGCCATAGTGCATAGCTACT...TTTATAATCTGCAGCTCTATTCCGAGCCCTTAGCACCCATTCCGACCATAGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
3UTR-3UTR CCA 90 bp TTCTCACCCTTTGATATGATTATACTATGGTCGGAATGGGTGCTAAGGGCTCGGATAGGGACTGTTAGCTaGAGTCTGGAGTCTTACCAA +
Preference number: 2 (lower is better)
Translates to: FSPFDMIILWSEWVLRARIGTVS*SLESYQ
Trigger: TTGGTAAGACTCCAGACTCCAGCTAACAGTCCCTAT...CCGAGCCCTTAGCACCCATTCCGACCATAGTATAATCATATCAAAGGGTGAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
3UTR-3UTR CCA 90 bp TTTGCAATCTACCTGAGACGGAAAACACCAATCGCAACACATGAACCTGAGACAATACTATGGTCGGAATaGGTGCTAAGGGCTCGGAAT +
Preference number: 2 (lower is better)
Translates to: FAIYLRRKTPIATHEPETILWSE*VLRARN
Trigger: ATTCCGAGCCCTTAGCACCCATTCCGACCATAGTAT...TGTCTCAGGTTCATGTGTTGCGATTGGTGTTTTCCGTCTCAGGTAGATTGCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000542447.6
3UTR-3UTR CCA 90 bp TTTGCATACCCTGTGGAGCTCAAAAGGCAAATGTACAGCAGTCACCACCTCCTGGCGAATGGGAACATATaGATATGGAGTTTCTTACAC +
Preference number: 2 (lower is better)
Translates to: FAYPVELKRQMYSSHHLLANGNI*IWSFLH
Trigger: GTGTAAGAAACTCCATATCCATATGTTCCCATTCGC...CAGGAGGTGGTGACTGCTGTACATTTGCCTTTTGAGCTCCACAGGGTATGCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
3UTR-3UTR TCA 90 bp TGGAAAAAGGAGGAGTCCTTTCTGCCCCAAACCTTTCTGGACAGCGTAGGGTATCTAAATTCTGAACTATaGAATCTAAGCTGTGCTGGT +
Preference number: 2 (lower is better)
Translates to: WKKEESFLPQTFLDSVGYLNSEL*NLSCAG
Trigger: ACCAGCACAGCTTAGATTTCATAGTTCAGAATTTAG...ATACCCTACGCTGTCCAGAAAGGTTTGGGGCAGAAAGGACTCCTCCTTTTTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
3UTR-3UTR TCA 90 bp CCCTTTGATATGATTATACTATGGTCGGAATGGGTGCTAAGGGCTCGGAATAGAGTAGGGTATCTATACTaGGCCGTCTACAGATACAGA +
Preference number: 2 (lower is better)
Translates to: PFDMIILWSEWVLRARNRVGYLY*AVYRYR
Trigger: TCTGTATCTGTAGACGGCTCAGTATAGATACCCTAC...TCTATTCCGAGCCCTTAGCACCCATTCCGACCATAGTATAATCATATCAAAGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
3UTR-3UTR TCA 90 bp ACTCTCTGGGGGAAACGAGGGCCATTTTCACTCTCGTACGCACTCTTCTCAAATTCTAGTGTGTGCTTTTaGTCCTTATTCTATCTCTCT +
Preference number: 2 (lower is better)
Translates to: TLWGKRGPFSLSYALFSNSSVCF*SLFYLS
Trigger: AGAGAGATAGAATAAGGATCAAAAGCACACACTAGA...ATTTGAGAAGAGTGCGTACGAGAGTGAAAATGGCCCTCGTTTCCCCCAGAGAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
3UTR-3UTR GCA 90 bp AGGAACAGACCTCACCTGTCAGGTCTGTTTAGGGCATGGAAAAAGGAGGAGTCCATGAAATCTAAGCTGTaGTGGTTCTCCTTTTATGAA +
Preference number: 2 (lower is better)
Translates to: RNRPHLSGLFRAWKKEESMKSKL*WFSFYE
Trigger: TTCATAAAAGGAGAACCAGCACAGCTTAGATTTCAT...GGACTCCTCCTTTTTCCATGCCCTAAACAGACCTGACAGGTGAGGTCTGTTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
3UTR-3UTR GCA 90 bp TTTGCATACCCTGTGGAGCTCAAAAGGCAAATGTACAGCAGTCACCACCTCCTGTTACATCAGGAACACTaGACTACTGTACACTTTTCA +
Preference number: 2 (lower is better)
Translates to: FAYPVELKRQMYSSHHLLLHQEH*TTVHFS
Trigger: TGAAAAGTGTACAGTAGTGCAGTGTTCCTGATGTAA...CAGGAGGTGGTGACTGCTGTACATTTGCCTTTTGAGCTCCACAGGGTATGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
3UTR-3UTR GCA 90 bp CAATGTGTGGGGCCTACACTTTGCAATCTACCTGAGACGGAAAACACCAATCGCTTACATCAGGAACACTaGACTACTGTACACTTTTCA +
Preference number: 2 (lower is better)
Translates to: QCVGPTLCNLPETENTNRLHQEH*TTVHFS
Trigger: TGAAAAGTGTACAGTAGTGCAGTGTTCCTGATGTAA...GCGATTGGTGTTTTCCGTCTCAGGTAGATTGCAAAGTGTAGGCCCCACACATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000542447.6
3UTR-3UTR CCA 90 bp TTTGCAATCTACCTGAGACGGAAAACACCAATCGCAACACATGAACCTGAGACAGCCGATTGGGAAAGGTaGATGGAATCATTTGGAACA +
Preference number: 2 (lower is better)
Translates to: FAIYLRRKTPIATHEPETADWER*MESFGT
Trigger: TGTTCCAAATGATTCCATCCACCTTTCCCAATCGGC...TGTCTCAGGTTCATGTGTTGCGATTGGTGTTTTCCGTCTCAGGTAGATTGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000542447.6
3UTR-3UTR CCA 90 bp TGGTCGGAATGGGTGCTAAGGGCTCGGAATAGAGCTGCAGATTATAAAATTCATAGAAGTAAGGCCGATTaGGAAAGGTGGATGGAATCA +
Preference number: 2 (lower is better)
Translates to: WSEWVLRARNRAADYKIHRSKAD*ERWMES
Trigger: TGATTCCATCCACCTTTCCCAATCGGCCTTACTTCT...ATGAATTTTATAATCTGCAGCTCTATTCCGAGCCCTTAGCACCCATTCCGACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
3UTR-3UTR CCA 90 bp CAATGTGTGGGGCCTACACTTTGCAATCTACCTGAGACGGAAAACACCAATCGCAGGATCAGTAATTTTTaGCAGATGGTTCTTAAGGCT +
Preference number: 2 (lower is better)
Translates to: QCVGPTLCNLPETENTNRRISNF*QMVLKA
Trigger: AGCCTTAAGAACCATCTGCCAAAAATTACTGATCCT...GCGATTGGTGTTTTCCGTCTCAGGTAGATTGCAAAGTGTAGGCCCCACACATTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000542447.6
3UTR-3UTR CCA 90 bp TGGTCGGAATGGGTGCTAAGGGCTCGGAATAGAGCTGCAGATTATAAAATTCATATAGGGACTGTTAGCTaGAGTCTGGAGTCTTACCAA +
Preference number: 2 (lower is better)
Translates to: WSEWVLRARNRAADYKIHIGTVS*SLESYQ
Trigger: TTGGTAAGACTCCAGACTCCAGCTAACAGTCCCTAT...ATGAATTTTATAATCTGCAGCTCTATTCCGAGCCCTTAGCACCCATTCCGACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
3UTR-3UTR CCA 90 bp CCCTTTGATATGATTATACTATGGTCGGAATGGGTGCTAAGGGCTCGGAATAGAATAGGGACTGTTAGCTaGAGTCTGGAGTCTTACCAA +
Preference number: 2 (lower is better)
Translates to: PFDMIILWSEWVLRARNRIGTVS*SLESYQ
Trigger: TTGGTAAGACTCCAGACTCCAGCTAACAGTCCCTAT...TCTATTCCGAGCCCTTAGCACCCATTCCGACCATAGTATAATCATATCAAAGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
3UTR-3UTR CCA 90 bp TTTGCATACCCTGTGGAGCTCAAAAGGCAAATGTACAGCAGTCACCACCTCCTGAAGGGATGTTCATTGTaGCTTTTTGTCTTGGTTAAG +
Preference number: 2 (lower is better)
Translates to: FAYPVELKRQMYSSHHLLKGCSL*LFVLVK
Trigger: CTTAACCAAGACAAAAAGCCACAATGAACATCCCTT...CAGGAGGTGGTGACTGCTGTACATTTGCCTTTTGAGCTCCACAGGGTATGCAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
3UTR-3UTR CCA 90 bp TTCCTGTGGGGGATCGGTATAGAGCTGGCAAAAGTATCTTCCTTCATCAGAAATTCACTCTTATTGACTTaGCAACTGATGGTCGCAACC +
Preference number: 2 (lower is better)
Translates to: FLWGIGIELAKVSSFIRNSLLLT*QLMVAT
Trigger: GGTTGCGACCATCAGTTGCCAAGTCAATAAGAGTGA...ATTTCTGATGAAGGAAGATACTTTTGCCAGCTCTATACCGATCCCCCACAGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540951.1
3UTR-3UTR TCA 90 bp TTTGCAATCTACCTGAGACGGAAAACACCAATCGCAACACATGAACCTGAGACAACTGCTCTAAGTATTTaGAACATGGGCAGCAGCAAA +
Preference number: 2 (lower is better)
Translates to: FAIYLRRKTPIATHEPETTALSI*NMGSSK
Trigger: TTTGCTGCTGCCCATGTTTCAAATACTTAGAGCAGT...TGTCTCAGGTTCATGTGTTGCGATTGGTGTTTTCCGTCTCAGGTAGATTGCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000542447.6
3UTR-3UTR TCA 90 bp AGTGTGAGAACAATACCAGCCCTTCTTTTGTACCTCCTGCCTTTGTCAAGCCAAAATTCAATCTCATTGTaGCACACCTCACTTGCAGAT +
Preference number: 2 (lower is better)
Translates to: SVRTIPALLLYLLPLSSQNSISL*HTSLAD
Trigger: ATCTGCAAGTGAGGTGTGTCACAATGAGATTGAATT...TTGGCTTGACAAAGGCAGGAGGTACAAAAGAAGGGCTGGTATTGTTCTCACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
3UTR-3UTR TCA 90 bp TTCTCACCCTTTGATATGATTATACTATGGTCGGAATGGGTGCTAAGGGCTCGGAATTCAATCTCATTGTaGCACACCTCACTTGCAGAT +
Preference number: 2 (lower is better)
Translates to: FSPFDMIILWSEWVLRARNSISL*HTSLAD
Trigger: ATCTGCAAGTGAGGTGTGTCACAATGAGATTGAATT...CCGAGCCCTTAGCACCCATTCCGACCATAGTATAATCATATCAAAGGGTGAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
3UTR-3UTR TCA 90 bp TTCTCACCCTTTGATATGATTATACTATGGTCGGAATGGGTGCTAAGGGCTCGGCCAAATCTGAAGGAATaGAAGTTTCACACAGATTCG +
Preference number: 2 (lower is better)
Translates to: FSPFDMIILWSEWVLRARPNLKE*KFHTDS
Trigger: CGAATCTGTGTGAAACTTTCATTCCTTCAGATTTGG...CCGAGCCCTTAGCACCCATTCCGACCATAGTATAATCATATCAAAGGGTGAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
3UTR-3UTR GCA 90 bp ATGGAAAAAGGAGGAGTCCTTTCTGCCCCAAACCTTTCTGGACAGCGTAGGGTAATGAAATCTAAGCTGTaGTGGTTCTCCTTTTATGAA +
Preference number: 2 (lower is better)
Translates to: MEKGGVLSAPNLSGQRRVMKSKL*WFSFYE
Trigger: TTCATAAAAGGAGAACCAGCACAGCTTAGATTTCAT...TACCCTACGCTGTCCAGAAAGGTTTGGGGCAGAAAGGACTCCTCCTTTTTCCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
3UTR-3UTR GCA 90 bp TGGAAAAAGGAGGAGTCCTTTCTGCCCCAAACCTTTCTGGACAGCGTAGGGTATATGAAATCTAAGCTGTaGTGGTTCTCCTTTTATGAA +
Preference number: 2 (lower is better)
Translates to: WKKEESFLPQTFLDSVGYMKSKL*WFSFYE
Trigger: TTCATAAAAGGAGAACCAGCACAGCTTAGATTTCAT...ATACCCTACGCTGTCCAGAAAGGTTTGGGGCAGAAAGGACTCCTCCTTTTTCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
3UTR-3UTR GCA 90 bp TTCTCACCCTTTGATATGATTATACTATGGTCGGAATGGGTGCTAAGGGCTCGGAAAAGGCCCCCATATTaGAATGGTTCTATCAAAGGT +
Preference number: 2 (lower is better)
Translates to: FSPFDMIILWSEWVLRARKRPPY*NGSIKG
Trigger: ACCTTTGATAGAACCATTGCAATATGGGGGCCTTTT...CCGAGCCCTTAGCACCCATTCCGACCATAGTATAATCATATCAAAGGGTGAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
3UTR-3UTR GCA 90 bp TGCAGGATAAACAGTATTAGAAGATGCAATCGTAACATTGCTGACTTCAGGATGTTGCTCACTTCAGCCTaGAAGGCAAGGACGATGACA +
Preference number: 2 (lower is better)
Translates to: CRINSIRRCNRNIADFRMLLTSA*KARTMT
Trigger: TGTCATCGTCCTTGCCTTGCAGGCTGAAGTGAGCAA...CATCCTGAAGTCAGCAATGTTACGATTGCATCTTCTAATACTGTTTATCCTGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
3UTR-3UTR CCA 90 bp ATACTATGGTCGGAATGGGTGCTAAGGGCTCGGAATAGAGCTGCAGATTATAAACTGTTAGCTGGAGTCTaGAGTCTTACCAAACATATG +
Preference number: 2 (lower is better)
Translates to: ILWSEWVLRARNRAADYKLLAGV*SLTKHM
Trigger: CATATGTTTGGTAAGACTCCAGACTCCAGCTAACAG...TTTATAATCTGCAGCTCTATTCCGAGCCCTTAGCACCCATTCCGACCATAGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
3UTR-3UTR CCA 90 bp TGCAGGATAAACAGTATTAGAAGATGCAATCGTAACATTGCTGACTTCAGGATGAGGAGCATTTCTCCATaGAGCAAGTCCACAGCGGTA +
Preference number: 2 (lower is better)
Translates to: CRINSIRRCNRNIADFRMRSISP*SKSTAV
Trigger: TACCGCTGTGGACTTGCTCCATGGAGAAATGCTCCT...CATCCTGAAGTCAGCAATGTTACGATTGCATCTTCTAATACTGTTTATCCTGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
3UTR-3UTR GCA 90 bp ATACTATGGTCGGAATGGGTGCTAAGGGCTCGGAATAGAGCTGCAGATTATAAAAAAAGGCCCCCATATTaGAATGGTTCTATCAAAGGT +
Preference number: 2 (lower is better)
Translates to: ILWSEWVLRARNRAADYKKRPPY*NGSIKG
Trigger: ACCTTTGATAGAACCATTGCAATATGGGGGCCTTTT...TTTATAATCTGCAGCTCTATTCCGAGCCCTTAGCACCCATTCCGACCATAGTAT
42% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
3UTR-3UTR GCA 90 bp TGCAGGATAAACAGTATTAGAAGATGCAATCGTAACATTGCTGACTTCAGGATGAAGTATCGAGTCCTCTaGCCGGACTTTTCAGTACAG +
Preference number: 2 (lower is better)
Translates to: CRINSIRRCNRNIADFRMKYRVL*PDFSVQ
Trigger: CTGTACTGAAAAGTCCGGGCAGAGGACTCGATACTT...CATCCTGAAGTCAGCAATGTTACGATTGCATCTTCTAATACTGTTTATCCTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
3UTR-3UTR CCA 90 bp TCCTCTACCTTTTCCCGAGGCTCCCCATCTAAGATATGTTCAAGGTCACTGATTAGGATCAGTAATTTTTaGCAGATGGTTCTTAAGGCT +
Preference number: 2 (lower is better)
Translates to: SSTFSRGSPSKICSRSLIRISNF*QMVLKA
Trigger: AGCCTTAAGAACCATCTGCCAAAAATTACTGATCCT...AATCAGTGACCTTGAACATATCTTAGATGGGGAGCCTCGGGAAAAGGTAGAGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
3UTR-3UTR TCA 90 bp AACCTTTCTGGACAGCGTAGGGTATCTATACTGAGCCGTCTACAGATACAGAATCTAAATTCTGAACTATaGAATCTAAGCTGTGCTGGT +
Preference number: 2 (lower is better)
Translates to: NLSGQRRVSILSRLQIQNLNSEL*NLSCAG
Trigger: ACCAGCACAGCTTAGATTTCATAGTTCAGAATTTAG...ATTCTGTATCTGTAGACGGCTCAGTATAGATACCCTACGCTGTCCAGAAAGGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
3UTR-3UTR TCA 90 bp CATTGTGACACACCTCACTTGCAGATAACCCTGTACAGTAATGTAGTTCCACAGCTAAATTCTGAACTATaGAATCTAAGCTGTGCTGGT +
Preference number: 2 (lower is better)
Translates to: HCDTPHLQITLYSNVVPQLNSEL*NLSCAG
Trigger: ACCAGCACAGCTTAGATTTCATAGTTCAGAATTTAG...CTGTGGAACTACATTACTGTACAGGGTTATCTGCAAGTGAGGTGTGTCACAATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
3UTR-3UTR GCA 90 bp TACAAAATGCGAATGGGAACATATGGATATGGAGTTTCTTACACTGTAACATTGGCTATGCACTATGGCTaGCATCATGCGAGGATCAGT +
Preference number: 2 (lower is better)
Translates to: YKMRMGTYGYGVSYTVTLAMHYG*HHARIS
Trigger: ACTGATCCTCGCATGATGGCAGCCATAGTGCATAGC...CAATGTTACAGTGTAAGAAACTCCATATCCATATGTTCCCATTCGCATTTTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000542447.6
3UTR-3UTR CCA 90 bp ATACTATGGTCGGAATGGGTGCTAAGGGCTCGGAATAGAGCTGCAGATTATAAAATTGGGAAAGGTGGATaGAATCATTTGGAACAGAAA +
Preference number: 2 (lower is better)
Translates to: ILWSEWVLRARNRAADYKIGKGG*NHLEQK
Trigger: TTTCTGTTCCAAATGATTCCATCCACCTTTCCCAAT...TTTATAATCTGCAGCTCTATTCCGAGCCCTTAGCACCCATTCCGACCATAGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
3UTR-3UTR CCA 90 bp TGGTCGGAATGGGTGCTAAGGGCTCGGAATAGAGCTGCAGATTATAAAATTCATGTAATTTTTGGCAGATaGTTCTTAAGGCTGAGGAAA +
Preference number: 2 (lower is better)
Translates to: WSEWVLRARNRAADYKIHVIFGR*FLRLRK
Trigger: TTTCCTCAGCCTTAAGAACCATCTGCCAAAAATTAC...ATGAATTTTATAATCTGCAGCTCTATTCCGAGCCCTTAGCACCCATTCCGACCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
3UTR-3UTR CCA 90 bp CCCTTTGATATGATTATACTATGGTCGGAATGGGTGCTAAGGGCTCGGAATAGAAAGGGATGTTCATTGTaGCTTTTTGTCTTGGTTAAG +
Preference number: 2 (lower is better)
Translates to: PFDMIILWSEWVLRARNRKGCSL*LFVLVK
Trigger: CTTAACCAAGACAAAAAGCCACAATGAACATCCCTT...TCTATTCCGAGCCCTTAGCACCCATTCCGACCATAGTATAATCATATCAAAGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
3UTR-3UTR GCA 90 bp ATACTATGGTCGGAATGGGTGCTAAGGGCTCGGAATAGAGCTGCAGATTATAAAATGAAATCTAAGCTGTaGTGGTTCTCCTTTTATGAA +
Preference number: 2 (lower is better)
Translates to: ILWSEWVLRARNRAADYKMKSKL*WFSFYE
Trigger: TTCATAAAAGGAGAACCAGCACAGCTTAGATTTCAT...TTTATAATCTGCAGCTCTATTCCGAGCCCTTAGCACCCATTCCGACCATAGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
3UTR-3UTR GCA 90 bp CCCTTTGATATGATTATACTATGGTCGGAATGGGTGCTAAGGGCTCGGAATAGAATGAAATCTAAGCTGTaGTGGTTCTCCTTTTATGAA +
Preference number: 2 (lower is better)
Translates to: PFDMIILWSEWVLRARNRMKSKL*WFSFYE
Trigger: TTCATAAAAGGAGAACCAGCACAGCTTAGATTTCAT...TCTATTCCGAGCCCTTAGCACCCATTCCGACCATAGTATAATCATATCAAAGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
3UTR-3UTR GCA 90 bp ATACTATGGTCGGAATGGGTGCTAAGGGCTCGGAATAGAGCTGCAGATTATAAACACAACAGACGAACTTaGTTTTTCCTACAAATTAGT +
Preference number: 2 (lower is better)
Translates to: ILWSEWVLRARNRAADYKHNRRT*FFLQIS
Trigger: ACTAATTTGTAGGAAAAAGCAAGTTCGTCTGTTGTG...TTTATAATCTGCAGCTCTATTCCGAGCCCTTAGCACCCATTCCGACCATAGTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
3UTR-3UTR CCA 90 bp AATGAAAGTTTCACACAGATTCGAGTTGGAAATCCCAGCATGACAAATATCTGTCTACTTCCCCTCCTGTaGCAACTCAAAATTTGTCCA +
Preference number: 2 (lower is better)
Translates to: NESFTQIRVGNPSMTNICLLPLL*QLKICP
Trigger: TGGACAAATTTTGAGTTGCCACAGGAGGGGAAGTAG...ACAGATATTTGTCATGCTGGGATTTCCAACTCGAATCTGTGTGAAACTTTCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
3UTR-3UTR CCA 90 bp AATGAAAGTTTCACACAGATTCGAGTTGGAAATCCCAGCATGACAAATATCTGTGCCGATTGGGAAAGGTaGATGGAATCATTTGGAACA +
Preference number: 2 (lower is better)
Translates to: NESFTQIRVGNPSMTNICADWER*MESFGT
Trigger: TGTTCCAAATGATTCCATCCACCTTTCCCAATCGGC...ACAGATATTTGTCATGCTGGGATTTCCAACTCGAATCTGTGTGAAACTTTCATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
3UTR CAA 90 bp ACACATTTCAATATTCAGCAACCATTAAGGGATTTAAATATTTGCTaGCTATTAAAGGCCTGCATTAGGCTCTTCCAACACCAGCTCTGG +
Preference number: 2 (lower is better)
Translates to: THFNIQQPLRDLNIC*LLKACIRLFQHQLW
Trigger: CCAGAGCTGGTGTTGGAAGAGCCTAATGCAGGCCTTTAATAGCAAGCAAATATTTAAATCCCTTAATGGTTGCTGAATATTGAAATGTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
3UTR-3UTR GCA 90 bp TGCAGGATAAACAGTATTAGAAGATGCAATCGTAACATTGCTGACTTCAGGATGGATGTATTTGGAGAATaGCAGGCCAAAACATTTGTG +
Preference number: 2 (lower is better)
Translates to: CRINSIRRCNRNIADFRMDVFGE*QAKTFV
Trigger: CACAAATGTTTTGGCCTGGCATTCTCCAAATACATC...CATCCTGAAGTCAGCAATGTTACGATTGCATCTTCTAATACTGTTTATCCTGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
3UTR-3UTR CCA 90 bp TACAAAATGCGAATGGGAACATATGGATATGGAGTTTCTTACACTGTAACATTGGGTCTGTTTAGGGCATaGAAAAAGGAGGAGTCCTTT +
Preference number: 2 (lower is better)
Translates to: YKMRMGTYGYGVSYTVTLGLFRA*KKEESF
Trigger: AAAGGACTCCTCCTTTTTCCATGCCCTAAACAGACC...CAATGTTACAGTGTAAGAAACTCCATATCCATATGTTCCCATTCGCATTTTGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000542447.6
3UTR-3UTR CCA 90 bp TACAAAATGCGAATGGGAACATATGGATATGGAGTTTCTTACACTGTAACATTGCTACTTCCCCTCCTGTaGCAACTCAAAATTTGTCCA +
Preference number: 2 (lower is better)
Translates to: YKMRMGTYGYGVSYTVTLLLPLL*QLKICP
Trigger: TGGACAAATTTTGAGTTGCCACAGGAGGGGAAGTAG...CAATGTTACAGTGTAAGAAACTCCATATCCATATGTTCCCATTCGCATTTTGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000542447.6
3UTR-3UTR CCA 90 bp TGCAGGATAAACAGTATTAGAAGATGCAATCGTAACATTGCTGACTTCAGGATGGCGAATGGGAACATATaGATATGGAGTTTCTTACAC +
Preference number: 2 (lower is better)
Translates to: CRINSIRRCNRNIADFRMANGNI*IWSFLH
Trigger: GTGTAAGAAACTCCATATCCATATGTTCCCATTCGC...CATCCTGAAGTCAGCAATGTTACGATTGCATCTTCTAATACTGTTTATCCTGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
3UTR CAA 90 bp AGAATTAAAGACAGTGAAATTCAATCTCATTGTGACACACCTCACTaGCAGATAACCCTGTACAGTAATGTAGTTCCACAGCAAACAGAA +
Preference number: 2 (lower is better)
Translates to: RIKDSEIQSHCDTPH*QITLYSNVVPQQTE
Trigger: TTCTGTTTGCTGTGGAACTACATTACTGTACAGGGTTATCTGCAAGTGAGGTGTGTCACAATGAGATTGAATTTCACTGTCTTTAATTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
3UTR-3UTR TCA 90 bp AATGAAAGTTTCACACAGATTCGAGTTGGAAATCCCAGCATGACAAATATCTGTAATTCAATCTCATTGTaGCACACCTCACTTGCAGAT +
Preference number: 2 (lower is better)
Translates to: NESFTQIRVGNPSMTNICNSISL*HTSLAD
Trigger: ATCTGCAAGTGAGGTGTGTCACAATGAGATTGAATT...ACAGATATTTGTCATGCTGGGATTTCCAACTCGAATCTGTGTGAAACTTTCATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
3UTR-3UTR TCA 90 bp TGCAGGATAAACAGTATTAGAAGATGCAATCGTAACATTGCTGACTTCAGGATGTTGTCAAGCCAAATCTaGAGGAATGAAAGTTTCACA +
Preference number: 2 (lower is better)
Translates to: CRINSIRRCNRNIADFRMLSSQI*RNESFT
Trigger: TGTGAAACTTTCATTCCTTCAGATTTGGCTTGACAA...CATCCTGAAGTCAGCAATGTTACGATTGCATCTTCTAATACTGTTTATCCTGCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
3UTR-3UTR CCA 90 bp TGCAGGATAAACAGTATTAGAAGATGCAATCGTAACATTGCTGACTTCAGGATGAATACAAAATGCGAATaGGAACATATGGATATGGAG +
Preference number: 2 (lower is better)
Translates to: CRINSIRRCNRNIADFRMNTKCE*EHMDME
Trigger: CTCCATATCCATATGTTCCCATTCGCATTTTGTATT...CATCCTGAAGTCAGCAATGTTACGATTGCATCTTCTAATACTGTTTATCCTGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
3UTR-3UTR TCA 90 bp TACAAAATGCGAATGGGAACATATGGATATGGAGTTTCTTACACTGTAACATTGTTGTCAAGCCAAATCTaGAGGAATGAAAGTTTCACA +
Preference number: 2 (lower is better)
Translates to: YKMRMGTYGYGVSYTVTLLSSQI*RNESFT
Trigger: TGTGAAACTTTCATTCCTTCAGATTTGGCTTGACAA...CAATGTTACAGTGTAAGAAACTCCATATCCATATGTTCCCATTCGCATTTTGTA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000542447.6
3UTR TCA 72 bp GCCCGCCACGACAGCTCGCACACCTGCACAAATCGCTaGGTCCACGTGGGAGCCCAGACTCAGCCACGGCAC +
Preference number: 3 (lower is better)
Translates to: ARHDSSHTCTNR*VHVGAQTQPRH
Trigger: GTGCCGTGGCTGAGTCTGGGCTCCCACGTGGACTCAGCGATTTGTGCAGGTGTGCGAGCTGTCGTGGCGGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
3UTR CCA 72 bp ACAGCTCGCACACCTGCACAAATCGCTGAGTCCACGTaGGAGCCCAGACTCAGCCACGGCACAGCACTTGGC +
Preference number: 3 (lower is better)
Translates to: TARTPAQIAEST*EPRLSHGTALG
Trigger: GCCAAGTGCTGTGCCGTGGCTGAGTCTGGGCTCCCACGTGGACTCAGCGATTTGTGCAGGTGTGCGAGCTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
3UTR-3UTR CAA 90 bp ATGACTGTGAGCCTGTGCACGTCTGGAGGGCAGCTGAAGTCCCGGGCCCAGAGAGGCTGGCTGGGCTTGTaGCCCTCTGTACTTTTGACT +
Preference number: 3 (lower is better)
Translates to: MTVSLCTSGGQLKSRAQRGWLGL*PSVLLT
Trigger: AGTCAAAAGTACAGAGGGCAACAAGCCCAGCCAGCC...TCTCTGGGCCCGGGACTTCAGCTGCCCTCCAGACGTGCACAGGCTCACAGTCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
3UTR CCA 72 bp TCACGTCTGAAATATGACTGTGAGCCTGTGCACGTCTaGAGGGCAGCTGAAGTCCCGGGCCCAGAGAACCGG +
Preference number: 3 (lower is better)
Translates to: SRLKYDCEPVHV*RAAEVPGPENR
Trigger: CCGGTTCTCTGGGCCCGGGACTTCAGCTGCCCTCCAGACGTGCACAGGCTCACAGTCATATTTCAGACGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
3UTR GCA 72 bp GAGACCAGGCCAGGATGGAAGTGGCTCAAGGGGAGATaGACAGCCTTCAGTCTTTCTGGAGCTTACCTTTGC +
Preference number: 3 (lower is better)
Translates to: ETRPGWKWLKGR*TAFSLSGAYLC
Trigger: GCAAAGGTAAGCTCCAGAAAGACTGAAGGCTGTGCATCTCCCCTTGAGCCACTTCCATCCTGGCCTGGTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
3UTR GCA 72 bp AGAGGCTGGGAGAGGTCACTGAAGTATCGAGTCCTCTaGCCGGACTTTTCAGTACAGCCACAAGACCCATCC +
Preference number: 3 (lower is better)
Translates to: RGWERSLKYRVL*PDFSVQPQDPS
Trigger: GGATGGGTCTTGTGGCTGTACTGAAAAGTCCGGGCAGAGGACTCGATACTTCAGTGACCTCTCCCAGCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
3UTR TCA 72 bp TCAGCCAGGTGCTCGACTCTTCTCCCTTTAATCAGCTaGTACTTGCTGGGTGACTACTGCGTGCCTGACAGG +
Preference number: 3 (lower is better)
Translates to: SARCSTLLPLIS*YLLGDYCVPDR
Trigger: CCTGTCAGGCACGCAGTAGTCACCCAGCAAGTATCAGCTGATTAAAGGGAGAAGAGTCGAGCACCTGGCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
3UTR-3UTR CAA 90 bp ACTCTCTGGGGGAAACGAGGGCCATTTTCACTCTCGTACGCACTCTTCTCAAATTGGGAAAAGGGCACTTaGGGCCTGGCCAGACGTTAT +
Preference number: 3 (lower is better)
Translates to: TLWGKRGPFSLSYALFSNWEKGT*GLARRY
Trigger: ATAACGTCTGGCCAGGCCCAAAGTGCCCTTTTCCCA...ATTTGAGAAGAGTGCGTACGAGAGTGAAAATGGCCCTCGTTTCCCCCAGAGAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
3UTR TCA 72 bp GACCTATCGAGAACTGAGAGCGACAGCAGACCAGTGTaGGAACAATACCAGCCCTTCTTTTGTACCTCCTGC +
Preference number: 3 (lower is better)
Translates to: DLSRTESDSRPV*EQYQPFFCTSC
Trigger: GCAGGAGGTACAAAAGAAGGGCTGGTATTGTTCTCACACTGGTCTGCTGTCGCTCTCAGTTCTCGATAGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
3UTR CCA 72 bp TGGGACCAGGACTGTGATGGTGGTGTAACTTTCCTGTaGGGGATCGGTATAGAGCTGGCAAAAGTATCTTCC +
Preference number: 3 (lower is better)
Translates to: WDQDCDGGVTFL*GIGIELAKVSS
Trigger: GGAAGATACTTTTGCCAGCTCTATACCGATCCCCCACAGGAAAGTTACACCACCATCACAGTCCTGGTCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540951.1
3UTR-3UTR CAA 90 bp TGTTTTTCCACCTCTGCTCTGACCTATCGAGAACTGAGAGCGACAGCAGACCAGTGTGACACACCTCACTaGCAGATAACCCTGTACAGT +
Preference number: 3 (lower is better)
Translates to: CFSTSALTYRELRATADQCDTPH*QITLYS
Trigger: ACTGTACAGGGTTATCTGCAAGTGAGGTGTGTCACA...CTGGTCTGCTGTCGCTCTCAGTTCTCGATAGGTCAGAGCAGAGGTGGAAAAACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
3UTR-3UTR CAA 90 bp CCTGCTGTCCTTCAAAGGCCTGAAGTCCCTGAAATAAATGGTCTGCCTGTTGGGGAGTCGTCACTCTTATaGACTTGGCAACTGATGGTC +
Preference number: 3 (lower is better)
Translates to: PAVLQRPEVPEINGLPVGESSLL*TWQLMV
Trigger: GACCATCAGTTGCCAAGTCAATAAGAGTGACGACTC...CCCAACAGGCAGACCATTTATTTCAGGGACTTCAGGCCTTTGAAGGACAGCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540951.1
3UTR GCA 72 bp GGGAAAAGGGCACTTTGGGCCTGGCCAGACGTTATCTaGACATTTATAAGATCGGCCACCATGAAGTGTAGT +
Preference number: 3 (lower is better)
Translates to: GKRALWAWPDVI*TFIRSATMKCS
Trigger: ACTACACTTCATGGTGGCCGATCTTATAAATGTGCAGATAACGTCTGGCCAGGCCCAAAGTGCCCTTTTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
3UTR GCA 72 bp GGACTTTTCAGTACAGCCACAAGACCCATCCCACCCTaGACACGGAATTGCTTTCTTCTCCCCATACAAATC +
Preference number: 3 (lower is better)
Translates to: GLFSTATRPIPP*TRNCFLLPIQI
Trigger: GATTTGTATGGGGAGAAGAAAGCAATTCCGTGTGCAGGGTGGGATGGGTCTTGTGGCTGTACTGAAAAGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
3UTR GCA 72 bp AAGAGGGAGAGGGGTGGGGAGACTAAACATACTGCATaGCACGTGGCTTGGAATAAGTCTGCTAATGAATGG +
Preference number: 3 (lower is better)
Translates to: KRERGGETKHTA*HVAWNKSANEW
Trigger: CCATTCATTAGCAGACTTATTCCAAGCCACGTGGCATGCAGTATGTTTAGTCTCCCCACCCCTCTCCCTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
3UTR CCA 72 bp AGGAACAGACCTCACCTGTCAGGTCTGTTTAGGGCATaGAAAAAGGAGGAGTCCTTTCTGCCCCAAACCTTT +
Preference number: 3 (lower is better)
Translates to: RNRPHLSGLFRA*KKEESFLPQTF
Trigger: AAAGGTTTGGGGCAGAAAGGACTCCTCCTTTTTCCATGCCCTAAACAGACCTGACAGGTGAGGTCTGTTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
3UTR CCA 72 bp TTTCACTCTCGTACGCACTCTTCTCAAATGAAGGAGTaGGCAACTTATCAAGATCCTTTGAGCGGGGACGGC +
Preference number: 3 (lower is better)
Translates to: FHSRTHSSQMKE*ATYQDPLSGDG
Trigger: GCCGTCCCCGCTCAAAGGATCTTGATAAGTTGCCCACTCCTTCATTTGAGAAGAGTGCGTACGAGAGTGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
3UTR-3UTR CAA 90 bp ACTGAAGTATCGAGTCCTCTGCCCGGACTTTTCAGTACAGCCACAAGACCCATCCACTGCTCTAAGTATTaGAAACATGGGCAGCAGCAA +
Preference number: 3 (lower is better)
Translates to: TEVSSPLPGLFSTATRPIHCSKY*KHGQQQ
Trigger: TTGCTGCTGCCCATGTTTCAAATACTTAGAGCAGTG...GATGGGTCTTGTGGCTGTACTGAAAAGTCCGGGCAGAGGACTCGATACTTCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
3UTR-3UTR CAA 90 bp ATGGAAAAAGGAGGAGTCCTTTCTGCCCCAAACCTTTCTGGACAGCGTAGGGTATGTGACACACCTCACTaGCAGATAACCCTGTACAGT +
Preference number: 3 (lower is better)
Translates to: MEKGGVLSAPNLSGQRRVCDTPH*QITLYS
Trigger: ACTGTACAGGGTTATCTGCAAGTGAGGTGTGTCACA...TACCCTACGCTGTCCAGAAAGGTTTGGGGCAGAAAGGACTCCTCCTTTTTCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
3UTR-3UTR CAA 90 bp TGGAAAAAGGAGGAGTCCTTTCTGCCCCAAACCTTTCTGGACAGCGTAGGGTATTGTGACACACCTCACTaGCAGATAACCCTGTACAGT +
Preference number: 3 (lower is better)
Translates to: WKKEESFLPQTFLDSVGYCDTPH*QITLYS
Trigger: ACTGTACAGGGTTATCTGCAAGTGAGGTGTGTCACA...ATACCCTACGCTGTCCAGAAAGGTTTGGGGCAGAAAGGACTCCTCCTTTTTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
3UTR TCA 72 bp GCACCTTTTTGGCTGAGCGCTGACTGCATATCTCACTaGTCTTTCCTAACAACCTTCGAGGCTATGGTGATG +
Preference number: 3 (lower is better)
Translates to: APFWLSADCISH*SFLTTFEAMVM
Trigger: CATCACCATAGCCTCGAAGGTTGTTAGGAAAGATCAGTGAGATATGCAGTCAGCGCTCAGCCAAAAAGGTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
3UTR TCA 72 bp GTCATTAAACCTTCTAAGTCGTGGTTTGCAAGGGCATaGTGTGTCTATATGCAGAGGAGCCCTCAGAGCTCC +
Preference number: 3 (lower is better)
Translates to: VIKPSKSWFARA*CVYMQRSPQSS
Trigger: GGAGCTCTGAGGGCTCCTCTGCATATAGACACATCATGCCCTTGCAAACCACGACTTAGAAGGTTTAATGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
3UTR CCA 72 bp ATGACAACAGAGCAAATCCTGCTGTCTACCCAGGCCTaGAAGTCTCAGCAACCTAAACAGCAAGTGAGAACA +
Preference number: 3 (lower is better)
Translates to: MTTEQILLSTQA*KSQQPKQQVRT
Trigger: TGTTCTCACTTGCTGTTTAGGTTGCTGAGACTTCCAGGCCTGGGTAGACAGCAGGATTTGCTCTGTTGTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
3UTR CCA 72 bp AGAGGGGTGGGGAGACTAAACATACTGCATGCCACGTaGCTTGGAATAAGTCTGCTAATGAATGGTGAAGAG +
Preference number: 3 (lower is better)
Translates to: RGVGRLNILHAT*LGISLLMNGEE
Trigger: CTCTTCACCATTCATTAGCAGACTTATTCCAAGCCACGTGGCATGCAGTATGTTTAGTCTCCCCACCCCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
3UTR-3UTR CAA 90 bp TGGAAAAAGGAGGAGTCCTTTCTGCCCCAAACCTTTCTGGACAGCGTAGGGTATCACTGCTCTAAGTATTaGAAACATGGGCAGCAGCAA +
Preference number: 3 (lower is better)
Translates to: WKKEESFLPQTFLDSVGYHCSKY*KHGQQQ
Trigger: TTGCTGCTGCCCATGTTTCAAATACTTAGAGCAGTG...ATACCCTACGCTGTCCAGAAAGGTTTGGGGCAGAAAGGACTCCTCCTTTTTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
3UTR-3UTR CAA 90 bp ACTGAAGTATCGAGTCCTCTGCCCGGACTTTTCAGTACAGCCACAAGACCCATCTTCTGGAGCTTACCTTaGCTTTTCCTATGGAACTTT +
Preference number: 3 (lower is better)
Translates to: TEVSSPLPGLFSTATRPIFWSLP*LFLWNF
Trigger: AAAGTTCCATAGGAAAAGCAAAGGTAAGCTCCAGAA...GATGGGTCTTGTGGCTGTACTGAAAAGTCCGGGCAGAGGACTCGATACTTCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
3UTR-3UTR CAA 90 bp GTCCTTGAGAATGATAGGGCCAATCGCTCTAAACTCAGGACTGGCTGGCTTGTCGTTTCTTTGAGGTTCTaGATGACAGAATCAAAGGAG +
Preference number: 3 (lower is better)
Translates to: VLENDRANRSKLRTGWLVVSLRF*MTESKE
Trigger: CTCCTTTGATTCTGTCATCAAGAACCTCAAAGAAAC...GACAAGCCAGCCAGTCCTGAGTTTAGAGCGATTGGCCCTATCATTCTCAAGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
3UTR-3UTR CAA 90 bp TGCAGGATAAACAGTATTAGAAGATGCAATCGTAACATTGCTGACTTCAGGATGGGCCCAGAGAACCGGTaGATTTGCCCCTCAGTAGTG +
Preference number: 3 (lower is better)
Translates to: CRINSIRRCNRNIADFRMGPENR*ICPSVV
Trigger: CACTACTGAGGGGCAAATCAACCGGTTCTCTGGGCC...CATCCTGAAGTCAGCAATGTTACGATTGCATCTTCTAATACTGTTTATCCTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
3UTR TCA 72 bp TTTCCAATGTGTGGGGCCTACACTTTGCAATCTACCTaGGACGGAAAACACCAATCGCAACACATGAACCTG +
Preference number: 3 (lower is better)
Translates to: FPMCGAYTLQST*DGKHQSQHMNL
Trigger: CAGGTTCATGTGTTGCGATTGGTGTTTTCCGTCTCAGGTAGATTGCAAAGTGTAGGCCCCACACATTGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000542447.6
3UTR GCA 72 bp GTAACTGAAAATCCGTACATGCTGTTTTTCCACCTCTaGTCTGACCTATCGAGAACTGAGAGCGACAGCAGA +
Preference number: 3 (lower is better)
Translates to: VTENPYMLFFHL*SDLSRTESDSR
Trigger: TCTGCTGTCGCTCTCAGTTCTCGATAGGTCAGAGCAGAGGTGGAAAAACAGCATGTACGGATTTTCAGTTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
3UTR CCA 72 bp CACTATGGCTGCCATCATGCGAGGATCAGTAATTTTTaGCAGATGGTTCTTAAGGCTGAGGAAAGAGGCCAA +
Preference number: 3 (lower is better)
Translates to: HYGCHHARISNF*QMVLKAEERGQ
Trigger: TTGGCCTCTTTCCTCAGCCTTAAGAACCATCTGCCAAAAATTACTGATCCTCGCATGATGGCAGCCATAGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
3UTR-3UTR CAA 90 bp ATACTATGGTCGGAATGGGTGCTAAGGGCTCGGAATAGAGCTGCAGATTATAAATGTGACACACCTCACTaGCAGATAACCCTGTACAGT +
Preference number: 3 (lower is better)
Translates to: ILWSEWVLRARNRAADYKCDTPH*QITLYS
Trigger: ACTGTACAGGGTTATCTGCAAGTGAGGTGTGTCACA...TTTATAATCTGCAGCTCTATTCCGAGCCCTTAGCACCCATTCCGACCATAGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
3UTR-3UTR CAA 90 bp TTCTCACCCTTTGATATGATTATACTATGGTCGGAATGGGTGCTAAGGGCTCGGCAAAAGGCCCCCATATaGCAATGGTTCTATCAAAGG +
Preference number: 3 (lower is better)
Translates to: FSPFDMIILWSEWVLRARQKAPI*QWFYQR
Trigger: CCTTTGATAGAACCATTGCAATATGGGGGCCTTTTG...CCGAGCCCTTAGCACCCATTCCGACCATAGTATAATCATATCAAAGGGTGAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
3UTR-3UTR CAA 90 bp TGCAGGATAAACAGTATTAGAAGATGCAATCGTAACATTGCTGACTTCAGGATGGGCTGGCTGGGCTTGTaGCCCTCTGTACTTTTGACT +
Preference number: 3 (lower is better)
Translates to: CRINSIRRCNRNIADFRMGWLGL*PSVLLT
Trigger: AGTCAAAAGTACAGAGGGCAACAAGCCCAGCCAGCC...CATCCTGAAGTCAGCAATGTTACGATTGCATCTTCTAATACTGTTTATCCTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
3UTR GCA 72 bp TATCACCTCAGGGTTCCAGTTGATGTATTTGGAGAATaGCAGGCCAAAACATTTGTGAAAACTCTCTGGGGG +
Preference number: 3 (lower is better)
Translates to: YHLRVPVDVFGE*QAKTFVKTLWG
Trigger: CCCCCAGAGAGTTTTCACAAATGTTTTGGCCTGGCATTCTCCAAATACATCAACTGGAACCCTGAGGTGATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
3UTR-3UTR CAA 90 bp CCCTTTGATATGATTATACTATGGTCGGAATGGGTGCTAAGGGCTCGGAATAGACACTGCTCTAAGTATTaGAAACATGGGCAGCAGCAA +
Preference number: 3 (lower is better)
Translates to: PFDMIILWSEWVLRARNRHCSKY*KHGQQQ
Trigger: TTGCTGCTGCCCATGTTTCAAATACTTAGAGCAGTG...TCTATTCCGAGCCCTTAGCACCCATTCCGACCATAGTATAATCATATCAAAGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
3UTR-3UTR CAA 90 bp ACTCTCTGGGGGAAACGAGGGCCATTTTCACTCTCGTACGCACTCTTCTCAAATAAAAAGGGATGTTCATaGTGGCTTTTTGTCTTGGTT +
Preference number: 3 (lower is better)
Translates to: TLWGKRGPFSLSYALFSNKKGCS*WLFVLV
Trigger: AACCAAGACAAAAAGCCACAATGAACATCCCTTTTT...ATTTGAGAAGAGTGCGTACGAGAGTGAAAATGGCCCTCGTTTCCCCCAGAGAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
3UTR TCA 72 bp CCCCAAACCTTTCTGGACAGCGTAGGGTATCTATACTaGGCCGTCTACAGATACAGAATTAAAGACAGTGAA +
Preference number: 3 (lower is better)
Translates to: PQTFLDSVGYLY*AVYRYRIKDSE
Trigger: TTCACTGTCTTTAATTCTGTATCTGTAGACGGCTCAGTATAGATACCCTACGCTGTCCAGAAAGGTTTGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
3UTR TCA 72 bp TATTCTATCTCTCTGGGTCTTTTTATAGAGATGCAATaGATGAGTACTCCCTACTGCTCCTTGCCCTCTGGC +
Preference number: 3 (lower is better)
Translates to: YSISLGLFIEMQ*MSTPYCSLPSG
Trigger: GCCAGAGGGCAAGGAGCAGTAGGGAGTACTCATTCATTGCATCTCTATAAAAAGACCCAGAGAGATAGAATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
3UTR GCA 72 bp AAGGAATGTGGCTGCCAGTTCTTCATGACAAAGGGCTaGGTATTTGGGATCCTGGCAAAAAGGTGTATTAAT +
Preference number: 3 (lower is better)
Translates to: KECGCQFFMTKG*VFGILAKRCIN
Trigger: ATTAATACACCTTTTTGCCAGGATCCCAAATACGCAGCCCTTTGTCATGAAGAACTGGCAGCCACATTCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
3UTR CCA 72 bp CTTCACTTAAGCAGGGTCTTTCTACCTGTAACACAGTaGCCACATGGTTTCTTTGAGGTTCTTGATGACAGA +
Preference number: 3 (lower is better)
Translates to: LHLSRVFLPVTQ*PHGFFEVLDDR
Trigger: TCTGTCATCAAGAACCTCAAAGAAACCATGTGGCCACTGTGTTACAGGTAGAAAGACCCTGCTTAAGTGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
3UTR CCA 72 bp AATTGCAACACTATAGCTGCCCTCATCACTTTATTCTaGGAGAGGAGGTTAGAGAAAACAGGCCTAGAGAGA +
Preference number: 3 (lower is better)
Translates to: NCNTIAALITLF*ERRLEKTGLER
Trigger: TCTCTCTAGGCCTGTTTTCTCTAACCTCCTCTCCCAGAATAAAGTGATGAGGGCAGCTATAGTGTTGCAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
3UTR-3UTR CAA 90 bp TCTCATTGTGACACACCTCACTTGCAGATAACCCTGTACAGTAATGTAGTTCCACACTGCTCTAAGTATTaGAAACATGGGCAGCAGCAA +
Preference number: 3 (lower is better)
Translates to: SHCDTPHLQITLYSNVVPHCSKY*KHGQQQ
Trigger: TTGCTGCTGCCCATGTTTCAAATACTTAGAGCAGTG...TGGAACTACATTACTGTACAGGGTTATCTGCAAGTGAGGTGTGTCACAATGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
3UTR-3UTR CAA 90 bp AATTTGTCCACTTATATAAAAGGAACAGACCTCACCTGTCAGGTCTGTTTAGGGTGTGACACACCTCACTaGCAGATAACCCTGTACAGT +
Preference number: 3 (lower is better)
Translates to: NLSTYIKGTDLTCQVCLGCDTPH*QITLYS
Trigger: ACTGTACAGGGTTATCTGCAAGTGAGGTGTGTCACA...CCCTAAACAGACCTGACAGGTGAGGTCTGTTCCTTTTATATAAGTGGACAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
3UTR-3UTR CAA 90 bp TGCAGGATAAACAGTATTAGAAGATGCAATCGTAACATTGCTGACTTCAGGATGAGAGAACCGGTTGATTaGCCCCTCAGTAGTGGTTCT +
Preference number: 3 (lower is better)
Translates to: CRINSIRRCNRNIADFRMREPVD*PLSSGS
Trigger: AGAACCACTACTGAGGGGCAAATCAACCGGTTCTCT...CATCCTGAAGTCAGCAATGTTACGATTGCATCTTCTAATACTGTTTATCCTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
3UTR GCA 72 bp TCAAGGTCACTGATTTTAGTAGCTATGCACTATGGCTaGCATCATGCGAGGATCAGTAATTTTTGGCAGATG +
Preference number: 3 (lower is better)
Translates to: SRSLILVAMHYG*HHARISNFWQM
Trigger: CATCTGCCAAAAATTACTGATCCTCGCATGATGGCAGCCATAGTGCATAGCTACTAAAATCAGTGACCTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
3UTR CCA 72 bp TTCTCACCCTTTGATATGATTATACTATGGTCGGAATaGGTGCTAAGGGCTCGGAATAGAGCTGCAGATTAT +
Preference number: 3 (lower is better)
Translates to: FSPFDMIILWSE*VLRARNRAADY
Trigger: ATAATCTGCAGCTCTATTCCGAGCCCTTAGCACCCATTCCGACCATAGTATAATCATATCAAAGGGTGAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
3UTR CCA 72 bp GACATGCAAACATCAAGGTTTGAAATACAGCATCGGTaGCCCATTCAGATTAAGTGTAACGTAAGGCTCAGT +
Preference number: 3 (lower is better)
Translates to: DMQTSRFEIQHR*PIQIKCNVRLS
Trigger: ACTGAGCCTTACGTTACACTTAATCTGAATGGGCCACCGATGCTGTATTTCAAACCTTGATGTTTGCATGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
3UTR-3UTR CAA 90 bp AATTTGTCCACTTATATAAAAGGAACAGACCTCACCTGTCAGGTCTGTTTAGGGCACTGCTCTAAGTATTaGAAACATGGGCAGCAGCAA +
Preference number: 3 (lower is better)
Translates to: NLSTYIKGTDLTCQVCLGHCSKY*KHGQQQ
Trigger: TTGCTGCTGCCCATGTTTCAAATACTTAGAGCAGTG...CCCTAAACAGACCTGACAGGTGAGGTCTGTTCCTTTTATATAAGTGGACAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
3UTR TCA 72 bp TCTGAATGCAGGCAGCCTCTCTCTAGTGTGTGCTTTTaGTCCTTATTCTATCTCTCTGGGTCTTTTTATAGA +
Preference number: 3 (lower is better)
Translates to: SECRQPLSSVCF*SLFYLSGSFYR
Trigger: TCTATAAAAAGACCCAGAGAGATAGAATAAGGATCAAAAGCACACACTAGAGAGAGGCTGCCTGCATTCAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
3UTR TCA 72 bp AAACAAAGTTTCCTGTGTACTGAAGAGGCTGGAAGCTaGGGTTTGGAACACCTGAAAACAGAGAAGATTCTT +
Preference number: 3 (lower is better)
Translates to: KQSFLCTEEAGS*GLEHLKTEKIL
Trigger: AAGAATCTTCTCTGTTTTCAGGTGTTCCAAACCTCAGCTTCCAGCCTCTTCAGTACACAGGAAACTTTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
3UTR CCA 72 bp TTAAAGGCCTGCATTAGGCTCTTCCAACACCAGCTCTaGAAGACTGAAATATCAATTACGGATCAATTTTCC +
Preference number: 3 (lower is better)
Translates to: LKACIRLFQHQL*KTEISITDQFS
Trigger: GGAAAATTGATCCGTAATTGATATTTCAGTCTTCCAGAGCTGGTGTTGGAAGAGCCTAATGCAGGCCTTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
3UTR CCA 72 bp TCCATAGCAATACTTTTTAATCAGGTCTGCTGTGTCTaGGCAAACAGCTTTTGTGGATTAGCTAGACTTGCA +
Preference number: 3 (lower is better)
Translates to: SIAILFNQVCCV*ANSFCGLARLA
Trigger: TGCAAGTCTAGCTAATCCACAAAAGCTGTTTGCCCAGACACAGCAGACCTGATTAAAAAGTATTGCTATGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
3UTR-3UTR CAA 90 bp TGCAGGATAAACAGTATTAGAAGATGCAATCGTAACATTGCTGACTTCAGGATGCAAAAGGCCCCCATATaGCAATGGTTCTATCAAAGG +
Preference number: 3 (lower is better)
Translates to: CRINSIRRCNRNIADFRMQKAPI*QWFYQR
Trigger: CCTTTGATAGAACCATTGCAATATGGGGGCCTTTTG...CATCCTGAAGTCAGCAATGTTACGATTGCATCTTCTAATACTGTTTATCCTGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
3UTR-3UTR CAA 90 bp TGCAGGATAAACAGTATTAGAAGATGCAATCGTAACATTGCTGACTTCAGGATGTTGTGGCTTTTTGTCTaGGTTAAGTGCCTAGGGATA +
Preference number: 3 (lower is better)
Translates to: CRINSIRRCNRNIADFRMLWLFV*VKCLGI
Trigger: TATCCCTAGGCACTTAACCAAGACAAAAAGCCACAA...CATCCTGAAGTCAGCAATGTTACGATTGCATCTTCTAATACTGTTTATCCTGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
3UTR TCA 72 bp GGTAAAAGAATTACATTTCAGGTAGACAGAGGACAGTaGAAGATTGCACCAATTAACACCCGCATATCACCT +
Preference number: 3 (lower is better)
Translates to: GKRITFQVDRGQ*KIAPINTRISP
Trigger: AGGTGATATGCGGGTGTTAATTGGTGCAATCTTTCACTGTCCTCTGTCTACCTGAAATGTAATTCTTTTACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
3UTR-3UTR CAA 90 bp TACAAAATGCGAATGGGAACATATGGATATGGAGTTTCTTACACTGTAACATTGCAAAAGGCCCCCATATaGCAATGGTTCTATCAAAGG +
Preference number: 3 (lower is better)
Translates to: YKMRMGTYGYGVSYTVTLQKAPI*QWFYQR
Trigger: CCTTTGATAGAACCATTGCAATATGGGGGCCTTTTG...CAATGTTACAGTGTAAGAAACTCCATATCCATATGTTCCCATTCGCATTTTGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000542447.6
3UTR TCA 72 bp AAAGTTTCACACAGATTCGAGTTGGAAATCCCAGCATaGCAAATATCTGTAATATACAGTACATGCAGGCCA +
Preference number: 3 (lower is better)
Translates to: KVSHRFELEIPA*QISVIYSTCRP
Trigger: TGGCCTGCATGTACTGTATATTACAGATATTTGTCATGCTGGGATTTCCAACTCGAATCTGTGTGAAACTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
3UTR TCA 72 bp AGATGGATAGTAATTTCGTCACTAGCTAACAGAGACTaGTTAGTGCAGAAGATTCCCTTCCATAGCAATACT +
Preference number: 3 (lower is better)
Translates to: RWIVISSLANRD*LVQKIPFHSNT
Trigger: AGTATTGCTATGGAAGGGAATCTTCTGCACTAATCAGTCTCTGTTAGCTAGTGACGAAATTACTATCCATCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
3UTR CCA 72 bp GAACCAATACAAAATGCGAATGGGAACATATGGATATaGAGTTTCTTACACTGTAACATTGTCCATGTACAC +
Preference number: 3 (lower is better)
Translates to: EPIQNANGNIWI*SFLHCNIVHVH
Trigger: GTGTACATGGACAATGTTACAGTGTAAGAAACTCCATATCCATATGTTCCCATTCGCATTTTGTATTGGTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000542447.6
3UTR CCA 72 bp ATACATGAACCAATACAAAATGCGAATGGGAACATATaGATATGGAGTTTCTTACACTGTAACATTGTCCAT +
Preference number: 3 (lower is better)
Translates to: IHEPIQNANGNI*IWSFLHCNIVH
Trigger: ATGGACAATGTTACAGTGTAAGAAACTCCATATCCATATGTTCCCATTCGCATTTTGTATTGGTTCATGTAT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000542447.6
CDS-3UTR CCA 90 bp CTGGGGTCCCAGCTCTTTGTGAAGCTGTCTAGGGACTCACCAGCCTTCACTGATGCTGCCGCCGCACACTaGGATCCGCTCGGCAGCACT +
Preference number: 4 (lower is better)
Translates to: LGSQLFVKLSRDSPAFTDAAAAH*DPLGST
Trigger: AGTGCTGCCGAGCGGATCCCAGTGTGCGGCGGCAGC...ATCAGTGAAGGCTGGTGAGTCCCTAGACAGCTTCACAAAGAGCTGGGACCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
3UTR CAA 72 bp TGGAGGGCAGCTGAAGTCCCGGGCCCAGAGAACCGGTaGATTTGCCCCTCAGTAGTGGTTCTCACCTTCCCC +
Preference number: 4 (lower is better)
Translates to: WRAAEVPGPENR*ICPSVVVLTFP
Trigger: GGGGAAGGTGAGAACCACTACTGAGGGGCAAATCAACCGGTTCTCTGGGCCCGGGACTTCAGCTGCCCTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR CCA 90 bp ATGACTGTGAGCCTGTGCACGTCTGGAGGGCAGCTGAAGTCCCGGGCCCAGAGAAATCAGCAGGCTGGCTaGGCTTGTTGCCCTCTGTAC +
Preference number: 4 (lower is better)
Translates to: MTVSLCTSGGQLKSRAQRNQQAG*ACCPLY
Trigger: GTACAGAGGGCAACAAGCCCAGCCAGCCTGCTGATT...TCTCTGGGCCCGGGACTTCAGCTGCCCTCCAGACGTGCACAGGCTCACAGTCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR GCA 90 bp ATGACTGTGAGCCTGTGCACGTCTGGAGGGCAGCTGAAGTCCCGGGCCCAGAGAGCTCAGTCAGCCAGGTaGTCGACTCTTCTCCCTTTA +
Preference number: 4 (lower is better)
Translates to: MTVSLCTSGGQLKSRAQRAQSAR*STLLPL
Trigger: TAAAGGGAGAAGAGTCGAGCACCTGGCTGACTGAGC...TCTCTGGGCCCGGGACTTCAGCTGCCCTCCAGACGTGCACAGGCTCACAGTCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR GCA 90 bp ATGACTGTGAGCCTGTGCACGTCTGGAGGGCAGCTGAAGTCCCGGGCCCAGAGACAAGGCCCTTCTCGATaGATTGGTGTCTCTGCAAGG +
Preference number: 4 (lower is better)
Translates to: MTVSLCTSGGQLKSRAQRQGPSR*IGVSAR
Trigger: CCTTGCAGAGACACCAATGCATCGAGAAGGGCCTTG...TCTCTGGGCCCGGGACTTCAGCTGCCCTCCAGACGTGCACAGGCTCACAGTCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR CCA 90 bp GAGCAAATCCTGCTGTCTACCCAGGCCTGGAAGTCTCAGCAACCTAAACAGCAAGCTGCCGCCGCACACTaGGATCCGCTCGGCAGCACT +
Preference number: 4 (lower is better)
Translates to: EQILLSTQAWKSQQPKQQAAAAH*DPLGST
Trigger: AGTGCTGCCGAGCGGATCCCAGTGTGCGGCGGCAGC...TTGCTGTTTAGGTTGCTGAGACTTCCAGGCCTGGGTAGACAGCAGGATTTGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR TCA 90 bp ATGACTGTGAGCCTGTGCACGTCTGGAGGGCAGCTGAAGTCCCGGGCCCAGAGAGACAGTACGGCGTGTTaGGGCATTTCATCATCGACT +
Preference number: 4 (lower is better)
Translates to: MTVSLCTSGGQLKSRAQRDSTAC*GISSST
Trigger: AGTCGATGATGAAATGCCTCAACACGCCGTACTGTC...TCTCTGGGCCCGGGACTTCAGCTGCCCTCCAGACGTGCACAGGCTCACAGTCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR GCA 90 bp ATGACTGTGAGCCTGTGCACGTCTGGAGGGCAGCTGAAGTCCCGGGCCCAGAGATTGCTGGGTGACTACTaGGTGCCTGACAGGAACTTT +
Preference number: 4 (lower is better)
Translates to: MTVSLCTSGGQLKSRAQRLLGDY*VPDRNF
Trigger: AAAGTTCCTGTCAGGCACGCAGTAGTCACCCAGCAA...TCTCTGGGCCCGGGACTTCAGCTGCCCTCCAGACGTGCACAGGCTCACAGTCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR GCA 90 bp AGGAACAGACCTCACCTGTCAGGTCTGTTTAGGGCATGGAAAAAGGAGGAGTCCGCCATGTCGGGCACCTaGCTCAGACTGGCGGCGTTG +
Preference number: 4 (lower is better)
Translates to: RNRPHLSGLFRAWKKEESAMSGT*LRLAAL
Trigger: CAACGCCGCCAGTCTGAGGCAGGTGCCCGACATGGC...GGACTCCTCCTTTTTCCATGCCCTAAACAGACCTGACAGGTGAGGTCTGTTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542447.6
CDS-3UTR CCA 90 bp TGTTTTTCCACCTCTGCTCTGACCTATCGAGAACTGAGAGCGACAGCAGACCAGTCTGCCCATCACCTGTaGGGATCAGTGCCGCGGCGG +
Preference number: 4 (lower is better)
Translates to: CFSTSALTYRELRATADQSAHHL*GSVPRR
Trigger: CCGCCGCGGCACTGATCCCCACAGGTGATGGGCAGA...CTGGTCTGCTGTCGCTCTCAGTTCTCGATAGGTCAGAGCAGAGGTGGAAAAACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR TCA 90 bp CTGGGGTCCCAGCTCTTTGTGAAGCTGTCTAGGGACTCACCAGCCTTCACTGATTGCAGAGCAAGAGACTaGAGCCAGGTAGGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: LGSQLFVKLSRDSPAFTDCRARD*SQVGWA
Trigger: AGCCCAGCCTACCTGGCTTCAGTCTCTTGCTCTGCA...ATCAGTGAAGGCTGGTGAGTCCCTAGACAGCTTCACAAAGAGCTGGGACCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR TCA 90 bp ATGACTGTGAGCCTGTGCACGTCTGGAGGGCAGCTGAAGTCCCGGGCCCAGAGAGCAAACATCAAGGTTTaGAATACAGCATCGGTGGCC +
Preference number: 4 (lower is better)
Translates to: MTVSLCTSGGQLKSRAQRANIKV*NTASVA
Trigger: GGCCACCGATGCTGTATTTCAAACCTTGATGTTTGC...TCTCTGGGCCCGGGACTTCAGCTGCCCTCCAGACGTGCACAGGCTCACAGTCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR TCA 90 bp CAATGTGTGGGGCCTACACTTTGCAATCTACCTGAGACGGAAAACACCAATCGCCGTCTGGAGGGCAGCTaGAGTCCCGGGCCCAGAGAA +
Preference number: 4 (lower is better)
Translates to: QCVGPTLCNLPETENTNRRLEGS*SPGPRE
Trigger: TTCTCTGGGCCCGGGACTTCAGCTGCCCTCCAGACG...GCGATTGGTGTTTTCCGTCTCAGGTAGATTGCAAAGTGTAGGCCCCACACATTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR TCA 90 bp TTATTGACTTGGCAACTGATGGTCGCAACCTCTCCCTCGATCACTGTCACGTCTAGGCCGAGGCTGCAGTaGGCCGAGATTGTGCCACCG +
Preference number: 4 (lower is better)
Translates to: LLTWQLMVATSPSITVTSRPRLQ*AEIVPP
Trigger: CGGTGGCACAATCTCGGCTCACTGCAGCCTCGGCCT...AGACGTGACAGTGATCGAGGGAGAGGTTGCGACCATCAGTTGCCAAGTCAATAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540951.1
CDS-3UTR CCA 90 bp AATCACAGAGTCGTCACTCTTATTGACTTGGCAACTGATGGTCGCAACCTCTCCGCTGCCGCCGCACACTaGGATCCGCTCGGCAGCACT +
Preference number: 4 (lower is better)
Translates to: NHRVVTLIDLATDGRNLSAAAAH*DPLGST
Trigger: AGTGCTGCCGAGCGGATCCCAGTGTGCGGCGGCAGC...GGAGAGGTTGCGACCATCAGTTGCCAAGTCAATAAGAGTGACGACTCTGTGATT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540951.1
CDS-3UTR CCA 90 bp GACTCCTCTACCTTTTCCCGAGGCTCCCCATCTAAGATATGTTCAAGGTCACTGTCTGCCCATCACCTGTaGGGATCAGTGCCGCGGCGG +
Preference number: 4 (lower is better)
Translates to: DSSTFSRGSPSKICSRSLSAHHL*GSVPRR
Trigger: CCGCCGCGGCACTGATCCCCACAGGTGATGGGCAGA...CAGTGACCTTGAACATATCTTAGATGGGGAGCCTCGGGAAAAGGTAGAGGAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR TCA 90 bp GAGCAAATCCTGCTGTCTACCCAGGCCTGGAAGTCTCAGCAACCTAAACAGCAATCTGCAGGTTTCCAGTaGCCGCAGGGTGCTCCACCT +
Preference number: 4 (lower is better)
Translates to: EQILLSTQAWKSQQPKQQSAGFQ*PQGAPP
Trigger: AGGTGGAGCACCCTGCGGTCACTGGAAACCTGCAGA...TTGCTGTTTAGGTTGCTGAGACTTCCAGGCCTGGGTAGACAGCAGGATTTGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR TCA 90 bp GAGCAAATCCTGCTGTCTACCCAGGCCTGGAAGTCTCAGCAACCTAAACAGCAAACCTGCACAAATCGCTaGGTCCACGTGGGAGCCCAG +
Preference number: 4 (lower is better)
Translates to: EQILLSTQAWKSQQPKQQTCTNR*VHVGAQ
Trigger: CTGGGCTCCCACGTGGACTCAGCGATTTGTGCAGGT...TTGCTGTTTAGGTTGCTGAGACTTCCAGGCCTGGGTAGACAGCAGGATTTGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR GCA 90 bp GAGCAAATCCTGCTGTCTACCCAGGCCTGGAAGTCTCAGCAACCTAAACAGCAAACCTGTGGGGATCAGTaGCGCGGCGGAGAAGAGCAA +
Preference number: 4 (lower is better)
Translates to: EQILLSTQAWKSQQPKQQTCGDQ*RGGEEQ
Trigger: TTGCTCTTCTCCGCCGCGGCACTGATCCCCACAGGT...TTGCTGTTTAGGTTGCTGAGACTTCCAGGCCTGGGTAGACAGCAGGATTTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR GCA 90 bp CTGGGGTCCCAGCTCTTTGTGAAGCTGTCTAGGGACTCACCAGCCTTCACTGATCTGCATCCCTCACCATaGTGGACATACAGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: LGSQLFVKLSRDSPAFTDLHPSP*WTYSRC
Trigger: GCACCTGCTGTATGTCCAGCATGGTGAGGGATGCAG...ATCAGTGAAGGCTGGTGAGTCCCTAGACAGCTTCACAAAGAGCTGGGACCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR CCA 90 bp CTGGGGTCCCAGCTCTTTGTGAAGCTGTCTAGGGACTCACCAGCCTTCACTGATCCTGATAGTCGTGGCTaGCTTGCTGGCCATAGCAGT +
Preference number: 4 (lower is better)
Translates to: LGSQLFVKLSRDSPAFTDPDSRG*LAGHSS
Trigger: ACTGCTATGGCCAGCAAGCCAGCCACGACTATCAGG...ATCAGTGAAGGCTGGTGAGTCCCTAGACAGCTTCACAAAGAGCTGGGACCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR CCA 90 bp CTGGGGTCCCAGCTCTTTGTGAAGCTGTCTAGGGACTCACCAGCCTTCACTGATCCACAGCTGAGGGGATaGTGGGAAAAGGGCACTTTG +
Preference number: 4 (lower is better)
Translates to: LGSQLFVKLSRDSPAFTDPQLRG*WEKGTL
Trigger: CAAAGTGCCCTTTTCCCACCATCCCCTCAGCTGTGG...ATCAGTGAAGGCTGGTGAGTCCCTAGACAGCTTCACAAAGAGCTGGGACCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR TCA 90 bp TGGAAAAAGGAGGAGTCCTTTCTGCCCCAAACCTTTCTGGACAGCGTAGGGTATCCACCGATCACGGCATaGTCCACTGCCCTGATCGAG +
Preference number: 4 (lower is better)
Translates to: WKKEESFLPQTFLDSVGYPPITA*STALIE
Trigger: CTCGATCAGGGCAGTGGATCATGCCGTGATCGGTGG...ATACCCTACGCTGTCCAGAAAGGTTTGGGGCAGAAAGGACTCCTCCTTTTTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR TCA 90 bp CAATGTGTGGGGCCTACACTTTGCAATCTACCTGAGACGGAAAACACCAATCGCGGTGGGACAGGGATCTaGATGCAGGCAGCCTCTCTC +
Preference number: 4 (lower is better)
Translates to: QCVGPTLCNLPETENTNRGGTGI*MQAASL
Trigger: GAGAGAGGCTGCCTGCATTCAGATCCCTGTCCCACC...GCGATTGGTGTTTTCCGTCTCAGGTAGATTGCAAAGTGTAGGCCCCACACATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR TCA 90 bp ATGACTGTGAGCCTGTGCACGTCTGGAGGGCAGCTGAAGTCCCGGGCCCAGAGAGTAGACAGAGGACAGTaGAAGATTGCACCAATTAAC +
Preference number: 4 (lower is better)
Translates to: MTVSLCTSGGQLKSRAQRVDRGQ*KIAPIN
Trigger: GTTAATTGGTGCAATCTTTCACTGTCCTCTGTCTAC...TCTCTGGGCCCGGGACTTCAGCTGCCCTCCAGACGTGCACAGGCTCACAGTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR TCA 90 bp GTCCTTGAGAATGATAGGGCCAATCGCTCTAAACTCAGGACTGGCTGGCTTGTCTGGCTGGGGCTAACGTaGCTCAAGGCCCTTCTCGAT +
Preference number: 4 (lower is better)
Translates to: VLENDRANRSKLRTGWLVWLGLT*LKALLD
Trigger: ATCGAGAAGGGCCTTGAGTCACGTTAGCCCCAGCCA...GACAAGCCAGCCAGTCCTGAGTTTAGAGCGATTGGCCCTATCATTCTCAAGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR GCA 90 bp ACTCTCTGGGGGAAACGAGGGCCATTTTCACTCTCGTACGCACTCTTCTCAAATCCAGTGACCGCAGGGTaGTCCACCTGGCAGATCACT +
Preference number: 4 (lower is better)
Translates to: TLWGKRGPFSLSYALFSNPVTAG*STWQIT
Trigger: AGTGATCTGCCAGGTGGAGCACCCTGCGGTCACTGG...ATTTGAGAAGAGTGCGTACGAGAGTGAAAATGGCCCTCGTTTCCCCCAGAGAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR GCA 90 bp TGGAAAAAGGAGGAGTCCTTTCTGCCCCAAACCTTTCTGGACAGCGTAGGGTATCCAGTGACCGCAGGGTaGTCCACCTGGCAGATCACT +
Preference number: 4 (lower is better)
Translates to: WKKEESFLPQTFLDSVGYPVTAG*STWQIT
Trigger: AGTGATCTGCCAGGTGGAGCACCCTGCGGTCACTGG...ATACCCTACGCTGTCCAGAAAGGTTTGGGGCAGAAAGGACTCCTCCTTTTTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR GCA 90 bp ATGACTGTGAGCCTGTGCACGTCTGGAGGGCAGCTGAAGTCCCGGGCCCAGAGAACTAAACATACTGCATaGCACGTGGCTTGGAATAAG +
Preference number: 4 (lower is better)
Translates to: MTVSLCTSGGQLKSRAQRTKHTA*HVAWNK
Trigger: CTTATTCCAAGCCACGTGGCATGCAGTATGTTTAGT...TCTCTGGGCCCGGGACTTCAGCTGCCCTCCAGACGTGCACAGGCTCACAGTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR GCA 90 bp AGGAACAGACCTCACCTGTCAGGTCTGTTTAGGGCATGGAAAAAGGAGGAGTCCGAGATGCTAATGACATaGGCTGGAGGCGGAGTCCGG +
Preference number: 4 (lower is better)
Translates to: RNRPHLSGLFRAWKKEESEMLMT*AGGGVR
Trigger: CCGGACTCCGCCTCCAGCGCATGTCATTAGCATCTC...GGACTCCTCCTTTTTCCATGCCCTAAACAGACCTGACAGGTGAGGTCTGTTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542447.6
CDS-3UTR GCA 90 bp TCTCATTGTGACACACCTCACTTGCAGATAACCCTGTACAGTAATGTAGTTCCAACTGGCGGCGTTGGCTaGCTCCGGAGCCCGAGCGGA +
Preference number: 4 (lower is better)
Translates to: SHCDTPHLQITLYSNVVPTGGVG*LRSPSG
Trigger: TCCGCTCGGGCTCCGGAGGCAGCCAACGCCGCCAGT...TGGAACTACATTACTGTACAGGGTTATCTGCAAGTGAGGTGTGTCACAATGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542447.6
CDS-3UTR CCA 90 bp TCCTCTACCTTTTCCCGAGGCTCCCCATCTAAGATATGTTCAAGGTCACTGATTTCTGCCCATCACCTGTaGGGATCAGTGCCGCGGCGG +
Preference number: 4 (lower is better)
Translates to: SSTFSRGSPSKICSRSLISAHHL*GSVPRR
Trigger: CCGCCGCGGCACTGATCCCCACAGGTGATGGGCAGA...AATCAGTGACCTTGAACATATCTTAGATGGGGAGCCTCGGGAAAAGGTAGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR CCA 90 bp ATGACTGTGAGCCTGTGCACGTCTGGAGGGCAGCTGAAGTCCCGGGCCCAGAGAGAAATACAGCATCGGTaGCCCATTCAGATTAAGTGT +
Preference number: 4 (lower is better)
Translates to: MTVSLCTSGGQLKSRAQREIQHR*PIQIKC
Trigger: ACACTTAATCTGAATGGGCCACCGATGCTGTATTTC...TCTCTGGGCCCGGGACTTCAGCTGCCCTCCAGACGTGCACAGGCTCACAGTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR CCA 90 bp CATTGTGACACACCTCACTTGCAGATAACCCTGTACAGTAATGTAGTTCCACAGGCACCTGCCTCAGACTaGCGGCGTTGGCTGCCTCCG +
Preference number: 4 (lower is better)
Translates to: HCDTPHLQITLYSNVVPQAPASD*RRWLPP
Trigger: CGGAGGCAGCCAACGCCGCCAGTCTGAGGCAGGTGC...CTGTGGAACTACATTACTGTACAGGGTTATCTGCAAGTGAGGTGTGTCACAATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542447.6
CDS-3UTR TCA 90 bp GACTCCTCTACCTTTTCCCGAGGCTCCCCATCTAAGATATGTTCAAGGTCACTGACCTGCTCGGGAATCTaGGAGGTCCTCACTGTCCAG +
Preference number: 4 (lower is better)
Translates to: DSSTFSRGSPSKICSRSLTCSGI*EVLTVQ
Trigger: CTGGACAGTGAGGACCTCTCAGATTCCCGAGCAGGT...CAGTGACCTTGAACATATCTTAGATGGGGAGCCTCGGGAAAAGGTAGAGGAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000536727.5
CDS-3UTR TCA 90 bp CTGGGGTCCCAGCTCTTTGTGAAGCTGTCTAGGGACTCACCAGCCTTCACTGATGGGAGGTCCCAAAAATaGGATGCCAATTCTGTGAGC +
Preference number: 4 (lower is better)
Translates to: LGSQLFVKLSRDSPAFTDGRSQK*DANSVS
Trigger: GCTCACAGAATTGGCATCTCATTTTTGGGACCTCCC...ATCAGTGAAGGCTGGTGAGTCCCTAGACAGCTTCACAAAGAGCTGGGACCCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR TCA 90 bp ATGACTGTGAGCCTGTGCACGTCTGGAGGGCAGCTGAAGTCCCGGGCCCAGAGATTTATAGAGATGCAATaGATGAGTACTCCCTACTGC +
Preference number: 4 (lower is better)
Translates to: MTVSLCTSGGQLKSRAQRFIEMQ*MSTPYC
Trigger: GCAGTAGGGAGTACTCATTCATTGCATCTCTATAAA...TCTCTGGGCCCGGGACTTCAGCTGCCCTCCAGACGTGCACAGGCTCACAGTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR TCA 90 bp ATGACTGTGAGCCTGTGCACGTCTGGAGGGCAGCTGAAGTCCCGGGCCCAGAGACATAGCCTTTGTAACTaGAGCCAGATAGAGAGAAAA +
Preference number: 4 (lower is better)
Translates to: MTVSLCTSGGQLKSRAQRHSLCN*SQIERK
Trigger: TTTTCTCTCTATCTGGCTTCAGTTACAAAGGCTATG...TCTCTGGGCCCGGGACTTCAGCTGCCCTCCAGACGTGCACAGGCTCACAGTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR GCA 90 bp AATCACAGAGTCGTCACTCTTATTGACTTGGCAACTGATGGTCGCAACCTCTCCACCTGTGGGGATCAGTaGCGCGGCGGAGAAGAGCAA +
Preference number: 4 (lower is better)
Translates to: NHRVVTLIDLATDGRNLSTCGDQ*RGGEEQ
Trigger: TTGCTCTTCTCCGCCGCGGCACTGATCCCCACAGGT...GGAGAGGTTGCGACCATCAGTTGCCAAGTCAATAAGAGTGACGACTCTGTGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540951.1
CDS-3UTR GCA 90 bp TGTTTTTCCACCTCTGCTCTGACCTATCGAGAACTGAGAGCGACAGCAGACCAGAGATACCGCTGGGTCTaGAGGTTTCCAGTGACCGCA +
Preference number: 4 (lower is better)
Translates to: CFSTSALTYRELRATADQRYRWV*RFPVTA
Trigger: TGCGGTCACTGGAAACCTGCAGACCCAGCGGTATCT...CTGGTCTGCTGTCGCTCTCAGTTCTCGATAGGTCAGAGCAGAGGTGGAAAAACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR GCA 90 bp TGTTTTTCCACCTCTGCTCTGACCTATCGAGAACTGAGAGCGACAGCAGACCAGCACGGCATGATCCACTaGCCTGATCGAGCCTTCTTC +
Preference number: 4 (lower is better)
Translates to: CFSTSALTYRELRATADQHGMIH*PDRAFF
Trigger: GAAGAAGGCTCGATCAGGGCAGTGGATCATGCCGTG...CTGGTCTGCTGTCGCTCTCAGTTCTCGATAGGTCAGAGCAGAGGTGGAAAAACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR GCA 90 bp ACTCTCTGGGGGAAACGAGGGCCATTTTCACTCTCGTACGCACTCTTCTCAAATTGTGTCTGCGTCTGCTaGGTCATCGGCTCCTTTGGC +
Preference number: 4 (lower is better)
Translates to: TLWGKRGPFSLSYALFSNCVCVC*VIGSFG
Trigger: GCCAAAGGAGCCGATGACGCAGCAGACGCAGACACA...ATTTGAGAAGAGTGCGTACGAGAGTGAAAATGGCCCTCGTTTCCCCCAGAGAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR GCA 90 bp GAGCAAATCCTGCTGTCTACCCAGGCCTGGAAGTCTCAGCAACCTAAACAGCAAGAGAGAGGGGATGAGTaGGGAAGACACATCTACGGG +
Preference number: 4 (lower is better)
Translates to: EQILLSTQAWKSQQPKQQERGDE*GRHIYG
Trigger: CCCGTAGATGTGTCTTCCGCACTCATCCCCTCTCTC...TTGCTGTTTAGGTTGCTGAGACTTCCAGGCCTGGGTAGACAGCAGGATTTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR GCA 90 bp CTGGGGTCCCAGCTCTTTGTGAAGCTGTCTAGGGACTCACCAGCCTTCACTGATTGGCTCAAGGGGAGATaGACAGCCTTCAGTCTTTCT +
Preference number: 4 (lower is better)
Translates to: LGSQLFVKLSRDSPAFTDWLKGR*TAFSLS
Trigger: AGAAAGACTGAAGGCTGTGCATCTCCCCTTGAGCCA...ATCAGTGAAGGCTGGTGAGTCCCTAGACAGCTTCACAAAGAGCTGGGACCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR GCA 90 bp CTGGGGTCCCAGCTCTTTGTGAAGCTGTCTAGGGACTCACCAGCCTTCACTGATCGAGCCTTCTTCACCTaGTCGGGAATCTGTGATGAT +
Preference number: 4 (lower is better)
Translates to: LGSQLFVKLSRDSPAFTDRAFFT*SGICDD
Trigger: ATCATCACAGATTCCCGAGCAGGTGAAGAAGGCTCG...ATCAGTGAAGGCTGGTGAGTCCCTAGACAGCTTCACAAAGAGCTGGGACCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452722.7
CDS-3UTR CCA 90 bp TCTCATTGTGACACACCTCACTTGCAGATAACCCTGTACAGTAATGTAGTTCCAGCTGCCGCCGCACACTaGGATCCGCTCGGCAGCACT +
Preference number: 4 (lower is better)
Translates to: SHCDTPHLQITLYSNVVPAAAAH*DPLGST
Trigger: AGTGCTGCCGAGCGGATCCCAGTGTGCGGCGGCAGC...TGGAACTACATTACTGTACAGGGTTATCTGCAAGTGAGGTGTGTCACAATGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR CCA 90 bp CATTGTGACACACCTCACTTGCAGATAACCCTGTACAGTAATGTAGTTCCACAGTCTGCCCATCACCTGTaGGGATCAGTGCCGCGGCGG +
Preference number: 4 (lower is better)
Translates to: HCDTPHLQITLYSNVVPQSAHHL*GSVPRR
Trigger: CCGCCGCGGCACTGATCCCCACAGGTGATGGGCAGA...CTGTGGAACTACATTACTGTACAGGGTTATCTGCAAGTGAGGTGTGTCACAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR CCA 90 bp AACCTTTCTGGACAGCGTAGGGTATCTATACTGAGCCGTCTACAGATACAGAATTCTGCCCATCACCTGTaGGGATCAGTGCCGCGGCGG +
Preference number: 4 (lower is better)
Translates to: NLSGQRRVSILSRLQIQNSAHHL*GSVPRR
Trigger: CCGCCGCGGCACTGATCCCCACAGGTGATGGGCAGA...ATTCTGTATCTGTAGACGGCTCAGTATAGATACCCTACGCTGTCCAGAAAGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR CCA 90 bp CAGATTACGTGGTGGGACCAGGACTGTGATGGTGGTGTAACTTTCCTGTGGGGGGGTGTAACTTTCCTGTaGGGGATCGGTATAGAGCTG +
Preference number: 4 (lower is better)
Translates to: QITWWDQDCDGGVTFLWGGVTFL*GIGIEL
Trigger: CAGCTCTATACCGATCCCCCACAGGAAAGTTACACC...CCCCCACAGGAAAGTTACACCACCATCACAGTCCTGGTCCCACCACGTAATCTG
53% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000540951.1
CDS-3UTR CCA 90 bp CAATGTGTGGGGCCTACACTTTGCAATCTACCTGAGACGGAAAACACCAATCGCCACCTGGCAGATCACTaGGACCCCATCGTCCTCCTT +
Preference number: 4 (lower is better)
Translates to: QCVGPTLCNLPETENTNRHLADH*DPIVLL
Trigger: AAGGAGGACGATGGGGTCCCAGTGATCTGCCAGGTG...GCGATTGGTGTTTTCCGTCTCAGGTAGATTGCAAAGTGTAGGCCCCACACATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000542447.6
CDS-3UTR CCA 90 bp CTGGGGTCCCAGCTCTTTGTGAAGCTGTCTAGGGACTCACCAGCCTTCACTGATACTTCTAGATACCGCTaGGTCTGCAGGTTTCCAGTG +
Preference number: 4 (lower is better)
Translates to: LGSQLFVKLSRDSPAFTDTSRYR*VCRFPV
Trigger: CACTGGAAACCTGCAGACCCAGCGGTATCTAGAAGT...ATCAGTGAAGGCTGGTGAGTCCCTAGACAGCTTCACAAAGAGCTGGGACCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR CCA 90 bp AGGAACAGACCTCACCTGTCAGGTCTGTTTAGGGCATGGAAAAAGGAGGAGTCCGTTACCATCACAGGCTaGGGCTTCCCGATGGCTTCA +
Preference number: 4 (lower is better)
Translates to: RNRPHLSGLFRAWKKEESVTITG*GFPMAS
Trigger: TGAAGCCATCGGGAAGCCCCAGCCTGTGATGGTAAC...GGACTCCTCCTTTTTCCATGCCCTAAACAGACCTGACAGGTGAGGTCTGTTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR CCA 90 bp TGGAAAAAGGAGGAGTCCTTTCTGCCCCAAACCTTTCTGGACAGCGTAGGGTATTGGTGGTGGTGGTGGTaGTGGTTGTTGTGGGAGGAG +
Preference number: 4 (lower is better)
Translates to: WKKEESFLPQTFLDSVGYWWWWW*WLLWEE
Trigger: CTCCTCCCACAACAACCACCACCACCACCACCACCA...ATACCCTACGCTGTCCAGAAAGGTTTGGGGCAGAAAGGACTCCTCCTTTTTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000537058.5
CDS-3UTR CCA 90 bp GACTCCTCTACCTTTTCCCGAGGCTCCCCATCTAAGATATGTTCAAGGTCACTGCCACGGCACAGCACTTaGCTCACCTGTCCACTGAGA +
Preference number: 4 (lower is better)
Translates to: DSSTFSRGSPSKICSRSLPRHST*LTCPLR
Trigger: TCTCAGTGGACAGGTGAGCCAAGTGCTGTGCCGTGG...CAGTGACCTTGAACATATCTTAGATGGGGAGCCTCGGGAAAAGGTAGAGGAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR CCA 90 bp TGTTTTTCCACCTCTGCTCTGACCTATCGAGAACTGAGAGCGACAGCAGACCAGAGGGCACTTTGGGCCTaGCCAGACGTTATCTGCACA +
Preference number: 4 (lower is better)
Translates to: CFSTSALTYRELRATADQRALWA*PDVICT
Trigger: TGTGCAGATAACGTCTGGCCAGGCCCAAAGTGCCCT...CTGGTCTGCTGTCGCTCTCAGTTCTCGATAGGTCAGAGCAGAGGTGGAAAAACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR CCA 90 bp ATGGAAAAAGGAGGAGTCCTTTCTGCCCCAAACCTTTCTGGACAGCGTAGGGTACAGCTGAGGGGATGGTaGGAAAAGGGCACTTTGGGC +
Preference number: 4 (lower is better)
Translates to: MEKGGVLSAPNLSGQRRVQLRGW*EKGTLG
Trigger: GCCCAAAGTGCCCTTTTCCCACCATCCCCTCAGCTG...TACCCTACGCTGTCCAGAAAGGTTTGGGGCAGAAAGGACTCCTCCTTTTTCCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR CCA 90 bp GTCCTTGAGAATGATAGGGCCAATCGCTCTAAACTCAGGACTGGCTGGCTTGTCCCACAGCTGAGGGGATaGTGGGAAAAGGGCACTTTG +
Preference number: 4 (lower is better)
Translates to: VLENDRANRSKLRTGWLVPQLRG*WEKGTL
Trigger: CAAAGTGCCCTTTTCCCACCATCCCCTCAGCTGTGG...GACAAGCCAGCCAGTCCTGAGTTTAGAGCGATTGGCCCTATCATTCTCAAGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR CCA 90 bp TCCTCTACCTTTTCCCGAGGCTCCCCATCTAAGATATGTTCAAGGTCACTGATTGAGCCTGTGCACGTCTaGAGGGCAGCTGAAGTCCCG +
Preference number: 4 (lower is better)
Translates to: SSTFSRGSPSKICSRSLIEPVHV*RAAEVP
Trigger: CGGGACTTCAGCTGCCCTCCAGACGTGCACAGGCTC...AATCAGTGACCTTGAACATATCTTAGATGGGGAGCCTCGGGAAAAGGTAGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
3UTR CAA 72 bp CAACCACAGCTGAGGGGATGGTGGGAAAAGGGCACTTaGGGCCTGGCCAGACGTTATCTGCACATTTATAAG +
Preference number: 4 (lower is better)
Translates to: QPQLRGWWEKGT*GLARRYLHIYK
Trigger: CTTATAAATGTGCAGATAACGTCTGGCCAGGCCCAAAGTGCCCTTTTCCCACCATCCCCTCAGCTGTGGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR TCA 90 bp TGGAAAAAGGAGGAGTCCTTTCTGCCCCAAACCTTTCTGGACAGCGTAGGGTATCATGATCCACTGCCCTaGTCGAGCCTTCTTCACCTG +
Preference number: 4 (lower is better)
Translates to: WKKEESFLPQTFLDSVGYHDPLP*SSLLHL
Trigger: CAGGTGAAGAAGGCTCGATCAGGGCAGTGGATCATG...ATACCCTACGCTGTCCAGAAAGGTTTGGGGCAGAAAGGACTCCTCCTTTTTCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR TCA 90 bp AGGAACAGACCTCACCTGTCAGGTCTGTTTAGGGCATGGAAAAAGGAGGAGTCCGACAGCAGACCAGTGTaGGAACAATACCAGCCCTTC +
Preference number: 4 (lower is better)
Translates to: RNRPHLSGLFRAWKKEESDSRPV*EQYQPF
Trigger: GAAGGGCTGGTATTGTTCTCACACTGGTCTGCTGTC...GGACTCCTCCTTTTTCCATGCCCTAAACAGACCTGACAGGTGAGGTCTGTTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR TCA 90 bp GACTCCTCTACCTTTTCCCGAGGCTCCCCATCTAAGATATGTTCAAGGTCACTGGGTCCCAGCTCTTTGTaGAGCTGTCTAGGGACTCAC +
Preference number: 4 (lower is better)
Translates to: DSSTFSRGSPSKICSRSLGPSSL*SCLGTH
Trigger: GTGAGTCCCTAGACAGCTTCACAAAGAGCTGGGACC...CAGTGACCTTGAACATATCTTAGATGGGGAGCCTCGGGAAAAGGTAGAGGAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR TCA 90 bp CAATGTGTGGGGCCTACACTTTGCAATCTACCTGAGACGGAAAACACCAATCGCCCTTCACGGCCAACCTaGAAGCCACCTGTAGTAAGG +
Preference number: 4 (lower is better)
Translates to: QCVGPTLCNLPETENTNRPSRPT*KPPVVR
Trigger: CCTTACTACAGGTGGCTTTCAGGTTGGCCGTGAAGG...GCGATTGGTGTTTTCCGTCTCAGGTAGATTGCAAAGTGTAGGCCCCACACATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR GCA 90 bp TCCTCTACCTTTTCCCGAGGCTCCCCATCTAAGATATGTTCAAGGTCACTGATTACCTGTGGGGATCAGTaGCGCGGCGGAGAAGAGCAA +
Preference number: 4 (lower is better)
Translates to: SSTFSRGSPSKICSRSLITCGDQ*RGGEEQ
Trigger: TTGCTCTTCTCCGCCGCGGCACTGATCCCCACAGGT...AATCAGTGACCTTGAACATATCTTAGATGGGGAGCCTCGGGAAAAGGTAGAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR GCA 90 bp TCCTCTACCTTTTCCCGAGGCTCCCCATCTAAGATATGTTCAAGGTCACTGATTCCAGTGACCGCAGGGTaGTCCACCTGGCAGATCACT +
Preference number: 4 (lower is better)
Translates to: SSTFSRGSPSKICSRSLIPVTAG*STWQIT
Trigger: AGTGATCTGCCAGGTGGAGCACCCTGCGGTCACTGG...AATCAGTGACCTTGAACATATCTTAGATGGGGAGCCTCGGGAAAAGGTAGAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR GCA 90 bp ATGGAAAAAGGAGGAGTCCTTTCTGCCCCAAACCTTTCTGGACAGCGTAGGGTACACGGCATGATCCACTaGCCTGATCGAGCCTTCTTC +
Preference number: 4 (lower is better)
Translates to: MEKGGVLSAPNLSGQRRVHGMIH*PDRAFF
Trigger: GAAGAAGGCTCGATCAGGGCAGTGGATCATGCCGTG...TACCCTACGCTGTCCAGAAAGGTTTGGGGCAGAAAGGACTCCTCCTTTTTCCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR GCA 90 bp TGGAAAAAGGAGGAGTCCTTTCTGCCCCAAACCTTTCTGGACAGCGTAGGGTATCACGGCATGATCCACTaGCCTGATCGAGCCTTCTTC +
Preference number: 4 (lower is better)
Translates to: WKKEESFLPQTFLDSVGYHGMIH*PDRAFF
Trigger: GAAGAAGGCTCGATCAGGGCAGTGGATCATGCCGTG...ATACCCTACGCTGTCCAGAAAGGTTTGGGGCAGAAAGGACTCCTCCTTTTTCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR GCA 90 bp TTTGCATACCCTGTGGAGCTCAAAAGGCAAATGTACAGCAGTCACCACCTCCTGAGCTGTGTCTGCGTCTaGTGCGTCATCGGCTCCTTT +
Preference number: 4 (lower is better)
Translates to: FAYPVELKRQMYSSHHLLSCVCV*CVIGSF
Trigger: AAAGGAGCCGATGACGCAGCAGACGCAGACACAGCT...CAGGAGGTGGTGACTGCTGTACATTTGCCTTTTGAGCTCCACAGGGTATGCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR GCA 90 bp ATGGAAAAAGGAGGAGTCCTTTCTGCCCCAAACCTTTCTGGACAGCGTAGGGTAAGCTGTGTCTGCGTCTaGTGCGTCATCGGCTCCTTT +
Preference number: 4 (lower is better)
Translates to: MEKGGVLSAPNLSGQRRVSCVCV*CVIGSF
Trigger: AAAGGAGCCGATGACGCAGCAGACGCAGACACAGCT...TACCCTACGCTGTCCAGAAAGGTTTGGGGCAGAAAGGACTCCTCCTTTTTCCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR GCA 90 bp TGTTTTTCCACCTCTGCTCTGACCTATCGAGAACTGAGAGCGACAGCAGACCAGGATTATAGCTGTGTCTaGGTCTGCTGCGTCATCGGC +
Preference number: 4 (lower is better)
Translates to: CFSTSALTYRELRATADQDYSCV*VCCVIG
Trigger: GCCGATGACGCAGCAGACGCAGACACAGCTATAATC...CTGGTCTGCTGTCGCTCTCAGTTCTCGATAGGTCAGAGCAGAGGTGGAAAAACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR GCA 90 bp AGGAACAGACCTCACCTGTCAGGTCTGTTTAGGGCATGGAAAAAGGAGGAGTCCGATTATAGCTGTGTCTaGGTCTGCTGCGTCATCGGC +
Preference number: 4 (lower is better)
Translates to: RNRPHLSGLFRAWKKEESDYSCV*VCCVIG
Trigger: GCCGATGACGCAGCAGACGCAGACACAGCTATAATC...GGACTCCTCCTTTTTCCATGCCCTAAACAGACCTGACAGGTGAGGTCTGTTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR GCA 90 bp TTTGCATACCCTGTGGAGCTCAAAAGGCAAATGTACAGCAGTCACCACCTCCTGGAGAGAGGGGATGAGTaGGGAAGACACATCTACGGG +
Preference number: 4 (lower is better)
Translates to: FAYPVELKRQMYSSHHLLERGDE*GRHIYG
Trigger: CCCGTAGATGTGTCTTCCGCACTCATCCCCTCTCTC...CAGGAGGTGGTGACTGCTGTACATTTGCCTTTTGAGCTCCACAGGGTATGCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR GCA 90 bp GTCCTTGAGAATGATAGGGCCAATCGCTCTAAACTCAGGACTGGCTGGCTTGTCGTGAGAACAATCTTCTaGAGGCAGCCAAGCCAGTCC +
Preference number: 4 (lower is better)
Translates to: VLENDRANRSKLRTGWLVVRTIF*RQPSQS
Trigger: GGACTGGCTTGGCTGCCTGCAGAAGATTGTTCTCAC...GACAAGCCAGCCAGTCCTGAGTTTAGAGCGATTGGCCCTATCATTCTCAAGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR GCA 90 bp ACTGAAGTATCGAGTCCTCTGCCCGGACTTTTCAGTACAGCCACAAGACCCATCCAACAGAGCAAATCCTaGTGTCTACCCAGGCCTGGA +
Preference number: 4 (lower is better)
Translates to: TEVSSPLPGLFSTATRPIQQSKS*CLPRPG
Trigger: TCCAGGCCTGGGTAGACAGCAGGATTTGCTCTGTTG...GATGGGTCTTGTGGCTGTACTGAAAAGTCCGGGCAGAGGACTCGATACTTCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR GCA 90 bp TGTTTTTCCACCTCTGCTCTGACCTATCGAGAACTGAGAGCGACAGCAGACCAGATGAGTACTCCCTACTaGTCCTTGCCCTCTGGCAGA +
Preference number: 4 (lower is better)
Translates to: CFSTSALTYRELRATADQMSTPY*SLPSGR
Trigger: TCTGCCAGAGGGCAAGGAGCAGTAGGGAGTACTCAT...CTGGTCTGCTGTCGCTCTCAGTTCTCGATAGGTCAGAGCAGAGGTGGAAAAACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR GCA 90 bp TGTTTTTCCACCTCTGCTCTGACCTATCGAGAACTGAGAGCGACAGCAGACCAGAAAGCTGGAGCCTCATaGTGCAGACAAGAGGGAGAG +
Preference number: 4 (lower is better)
Translates to: CFSTSALTYRELRATADQKAGAS*CRQEGE
Trigger: CTCTCCCTCTTGTCTGCAGCATGAGGCTCCAGCTTT...CTGGTCTGCTGTCGCTCTCAGTTCTCGATAGGTCAGAGCAGAGGTGGAAAAACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR GCA 90 bp GAGCAAATCCTGCTGTCTACCCAGGCCTGGAAGTCTCAGCAACCTAAACAGCAACAAGGCCCTTCTCGATaGATTGGTGTCTCTGCAAGG +
Preference number: 4 (lower is better)
Translates to: EQILLSTQAWKSQQPKQQQGPSR*IGVSAR
Trigger: CCTTGCAGAGACACCAATGCATCGAGAAGGGCCTTG...TTGCTGTTTAGGTTGCTGAGACTTCCAGGCCTGGGTAGACAGCAGGATTTGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR GCA 90 bp AAATGGTCTGCCTGTTGGGATTCAGTAGCTGAATCACAGAGTCGTCACTCTTATCGGGAAGGCCGAGGCTaGAGTGAGCCGAGATTGTGC +
Preference number: 4 (lower is better)
Translates to: KWSACWDSVAESQSRHSYREGRG*SEPRLC
Trigger: GCACAATCTCGGCTCACTGCAGCCTCGGCCTTCCCG...ATAAGAGTGACGACTCTGTGATTCAGCTACTGAATCCCAACAGGCAGACCATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540951.1
CDS-3UTR CCA 90 bp ATGACTGTGAGCCTGTGCACGTCTGGAGGGCAGCTGAAGTCCCGGGCCCAGAGAAAGGGATGTTCATTGTaGCTTTTTGTCTTGGTTAAG +
Preference number: 4 (lower is better)
Translates to: MTVSLCTSGGQLKSRAQRKGCSL*LFVLVK
Trigger: CTTAACCAAGACAAAAAGCCACAATGAACATCCCTT...TCTCTGGGCCCGGGACTTCAGCTGCCCTCCAGACGTGCACAGGCTCACAGTCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR CCA 90 bp ATGGAAAAAGGAGGAGTCCTTTCTGCCCCAAACCTTTCTGGACAGCGTAGGGTAAGGGCACTTTGGGCCTaGCCAGACGTTATCTGCACA +
Preference number: 4 (lower is better)
Translates to: MEKGGVLSAPNLSGQRRVRALWA*PDVICT
Trigger: TGTGCAGATAACGTCTGGCCAGGCCCAAAGTGCCCT...TACCCTACGCTGTCCAGAAAGGTTTGGGGCAGAAAGGACTCCTCCTTTTTCCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR CCA 90 bp ACTCTCTGGGGGAAACGAGGGCCATTTTCACTCTCGTACGCACTCTTCTCAAATAAACTCAGGACTGGCTaGCTTGTCCCTTCACGGCCA +
Preference number: 4 (lower is better)
Translates to: TLWGKRGPFSLSYALFSNKLRTG*LVPSRP
Trigger: TGGCCGTGAAGGGACAAGCCAGCCAGTCCTGAGTTT...ATTTGAGAAGAGTGCGTACGAGAGTGAAAATGGCCCTCGTTTCCCCCAGAGAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR CCA 90 bp GGGAAGGAAAAGAGTCTAAGGAATCCCAGCAGGCAAATTCCAAAATGGGAGATTGAGCCTGTGCACGTCTaGAGGGCAGCTGAAGTCCCG +
Preference number: 4 (lower is better)
Translates to: GKEKSLRNPSRQIPKWEIEPVHV*RAAEVP
Trigger: CGGGACTTCAGCTGCCCTCCAGACGTGCACAGGCTC...AATCTCCCATTTTGGAATTTGCCTGCTGGGATTCCTTAGACTCTTTTCCTTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR TCA 90 bp GACTCCTCTACCTTTTCCCGAGGCTCCCCATCTAAGATATGTTCAAGGTCACTGGTGGGACCAGGACTGTaGTGGTGGTGTAACTTTCCT +
Preference number: 4 (lower is better)
Translates to: DSSTFSRGSPSKICSRSLVGPGL*WWCNFP
Trigger: AGGAAAGTTACACCACCATCACAGTCCTGGTCCCAC...CAGTGACCTTGAACATATCTTAGATGGGGAGCCTCGGGAAAAGGTAGAGGAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR TCA 90 bp AGAGTCGTCACTCTTATTGACTTGGCAACTGATGGTCGCAACCTCTCCCTCGATGTGGGACCAGGACTGTaGTGGTGGTGTAACTTTCCT +
Preference number: 4 (lower is better)
Translates to: RVVTLIDLATDGRNLSLDVGPGL*WWCNFP
Trigger: AGGAAAGTTACACCACCATCACAGTCCTGGTCCCAC...ATCGAGGGAGAGGTTGCGACCATCAGTTGCCAAGTCAATAAGAGTGACGACTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540951.1
CDS-3UTR TCA 90 bp ATGGAAAAAGGAGGAGTCCTTTCTGCCCCAAACCTTTCTGGACAGCGTAGGGTACACAGTGTACATGTCTaGCCACTCTTCCACCTCCGA +
Preference number: 4 (lower is better)
Translates to: MEKGGVLSAPNLSGQRRVHSVHV*PLFHLR
Trigger: TCGGAGGTGGAAGAGTGGTCAGACATGTACACTGTG...TACCCTACGCTGTCCAGAAAGGTTTGGGGCAGAAAGGACTCCTCCTTTTTCCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR TCA 90 bp ACTGAAGTATCGAGTCCTCTGCCCGGACTTTTCAGTACAGCCACAAGACCCATCGACAGTACGGCGTGTTaGGGCATTTCATCATCGACT +
Preference number: 4 (lower is better)
Translates to: TEVSSPLPGLFSTATRPIDSTAC*GISSST
Trigger: AGTCGATGATGAAATGCCTCAACACGCCGTACTGTC...GATGGGTCTTGTGGCTGTACTGAAAAGTCCGGGCAGAGGACTCGATACTTCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR TCA 90 bp TGGTCGGAATGGGTGCTAAGGGCTCGGAATAGAGCTGCAGATTATAAAATTCATCCACCGATCACGGCATaGTCCACTGCCCTGATCGAG +
Preference number: 4 (lower is better)
Translates to: WSEWVLRARNRAADYKIHPPITA*STALIE
Trigger: CTCGATCAGGGCAGTGGATCATGCCGTGATCGGTGG...ATGAATTTTATAATCTGCAGCTCTATTCCGAGCCCTTAGCACCCATTCCGACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR TCA 90 bp TTTGCAATCTACCTGAGACGGAAAACACCAATCGCAACACATGAACCTGAGACACCACCGATCACGGCATaGTCCACTGCCCTGATCGAG +
Preference number: 4 (lower is better)
Translates to: FAIYLRRKTPIATHEPETPPITA*STALIE
Trigger: CTCGATCAGGGCAGTGGATCATGCCGTGATCGGTGG...TGTCTCAGGTTCATGTGTTGCGATTGGTGTTTTCCGTCTCAGGTAGATTGCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000542447.6
CDS-3UTR TCA 90 bp CTGGGGTCCCAGCTCTTTGTGAAGCTGTCTAGGGACTCACCAGCCTTCACTGATGTAGGGTATCTATACTaGGCCGTCTACAGATACAGA +
Preference number: 4 (lower is better)
Translates to: LGSQLFVKLSRDSPAFTDVGYLY*AVYRYR
Trigger: TCTGTATCTGTAGACGGCTCAGTATAGATACCCTAC...ATCAGTGAAGGCTGGTGAGTCCCTAGACAGCTTCACAAAGAGCTGGGACCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR TCA 90 bp GACTCCTCTACCTTTTCCCGAGGCTCCCCATCTAAGATATGTTCAAGGTCACTGGACAGCAGACCAGTGTaGGAACAATACCAGCCCTTC +
Preference number: 4 (lower is better)
Translates to: DSSTFSRGSPSKICSRSLDSRPV*EQYQPF
Trigger: GAAGGGCTGGTATTGTTCTCACACTGGTCTGCTGTC...CAGTGACCTTGAACATATCTTAGATGGGGAGCCTCGGGAAAAGGTAGAGGAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR TCA 90 bp GAGCAAATCCTGCTGTCTACCCAGGCCTGGAAGTCTCAGCAACCTAAACAGCAAGGGAGGTCCCAAAAATaGGATGCCAATTCTGTGAGC +
Preference number: 4 (lower is better)
Translates to: EQILLSTQAWKSQQPKQQGRSQK*DANSVS
Trigger: GCTCACAGAATTGGCATCTCATTTTTGGGACCTCCC...TTGCTGTTTAGGTTGCTGAGACTTCCAGGCCTGGGTAGACAGCAGGATTTGCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR TCA 90 bp TGGTCGGAATGGGTGCTAAGGGCTCGGAATAGAGCTGCAGATTATAAAATTCATGGTGGGACAGGGATCTaGATGCAGGCAGCCTCTCTC +
Preference number: 4 (lower is better)
Translates to: WSEWVLRARNRAADYKIHGGTGI*MQAASL
Trigger: GAGAGAGGCTGCCTGCATTCAGATCCCTGTCCCACC...ATGAATTTTATAATCTGCAGCTCTATTCCGAGCCCTTAGCACCCATTCCGACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR TCA 90 bp CAATGTGTGGGGCCTACACTTTGCAATCTACCTGAGACGGAAAACACCAATCGCTGGCACCTTTTTGGCTaGGCGCTGACTGCATATCTC +
Preference number: 4 (lower is better)
Translates to: QCVGPTLCNLPETENTNRWHLFG*ALTAYL
Trigger: GAGATATGCAGTCAGCGCTCAGCCAAAAAGGTGCCA...GCGATTGGTGTTTTCCGTCTCAGGTAGATTGCAAAGTGTAGGCCCCACACATTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR TCA 90 bp TTCTCACCCTTTGATATGATTATACTATGGTCGGAATGGGTGCTAAGGGCTCGGCCTCAGAGCTCCCTCTaGGTAGTGACCGCTTCTTCG +
Preference number: 4 (lower is better)
Translates to: FSPFDMIILWSEWVLRARPQSSL*VVTASS
Trigger: CGAAGAAGCGGTCACTACTCAGAGGGAGCTCTGAGG...CCGAGCCCTTAGCACCCATTCCGACCATAGTATAATCATATCAAAGGGTGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR TCA 90 bp TTTGCATACCCTGTGGAGCTCAAAAGGCAAATGTACAGCAGTCACCACCTCCTGCTTATCAAGATCCTTTaGGCGGGGACGGCTTCTAGC +
Preference number: 4 (lower is better)
Translates to: FAYPVELKRQMYSSHHLLLIKIL*AGTASS
Trigger: GCTAGAAGCCGTCCCCGCTCAAAGGATCTTGATAAG...CAGGAGGTGGTGACTGCTGTACATTTGCCTTTTGAGCTCCACAGGGTATGCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR GCA 90 bp CCCTTTGATATGATTATACTATGGTCGGAATGGGTGCTAAGGGCTCGGAATAGAACCTGTGGGGATCAGTaGCGCGGCGGAGAAGAGCAA +
Preference number: 4 (lower is better)
Translates to: PFDMIILWSEWVLRARNRTCGDQ*RGGEEQ
Trigger: TTGCTCTTCTCCGCCGCGGCACTGATCCCCACAGGT...TCTATTCCGAGCCCTTAGCACCCATTCCGACCATAGTATAATCATATCAAAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR GCA 90 bp TGGTCGGAATGGGTGCTAAGGGCTCGGAATAGAGCTGCAGATTATAAAATTCATCCAGTGACCGCAGGGTaGTCCACCTGGCAGATCACT +
Preference number: 4 (lower is better)
Translates to: WSEWVLRARNRAADYKIHPVTAG*STWQIT
Trigger: AGTGATCTGCCAGGTGGAGCACCCTGCGGTCACTGG...ATGAATTTTATAATCTGCAGCTCTATTCCGAGCCCTTAGCACCCATTCCGACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR GCA 90 bp TCCTCTACCTTTTCCCGAGGCTCCCCATCTAAGATATGTTCAAGGTCACTGATTTGTGTCTGCGTCTGCTaGGTCATCGGCTCCTTTGGC +
Preference number: 4 (lower is better)
Translates to: SSTFSRGSPSKICSRSLICVCVC*VIGSFG
Trigger: GCCAAAGGAGCCGATGACGCAGCAGACGCAGACACA...AATCAGTGACCTTGAACATATCTTAGATGGGGAGCCTCGGGAAAAGGTAGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR GCA 90 bp ATGACTGTGAGCCTGTGCACGTCTGGAGGGCAGCTGAAGTCCCGGGCCCAGAGACACAACAGACGAACTTaGTTTTTCCTACAAATTAGT +
Preference number: 4 (lower is better)
Translates to: MTVSLCTSGGQLKSRAQRHNRRT*FFLQIS
Trigger: ACTAATTTGTAGGAAAAAGCAAGTTCGTCTGTTGTG...TCTCTGGGCCCGGGACTTCAGCTGCCCTCCAGACGTGCACAGGCTCACAGTCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR GCA 90 bp ATGGAAAAAGGAGGAGTCCTTTCTGCCCCAAACCTTTCTGGACAGCGTAGGGTAATGAGTACTCCCTACTaGTCCTTGCCCTCTGGCAGA +
Preference number: 4 (lower is better)
Translates to: MEKGGVLSAPNLSGQRRVMSTPY*SLPSGR
Trigger: TCTGCCAGAGGGCAAGGAGCAGTAGGGAGTACTCAT...TACCCTACGCTGTCCAGAAAGGTTTGGGGCAGAAAGGACTCCTCCTTTTTCCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR CCA 90 bp AGGAACAGACCTCACCTGTCAGGTCTGTTTAGGGCATGGAAAAAGGAGGAGTCCGGTGTAACTTTCCTGTaGGGGATCGGTATAGAGCTG +
Preference number: 4 (lower is better)
Translates to: RNRPHLSGLFRAWKKEESGVTFL*GIGIEL
Trigger: CAGCTCTATACCGATCCCCCACAGGAAAGTTACACC...GGACTCCTCCTTTTTCCATGCCCTAAACAGACCTGACAGGTGAGGTCTGTTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR CCA 90 bp TGTTTTTCCACCTCTGCTCTGACCTATCGAGAACTGAGAGCGACAGCAGACCAGACTTCTAGATACCGCTaGGTCTGCAGGTTTCCAGTG +
Preference number: 4 (lower is better)
Translates to: CFSTSALTYRELRATADQTSRYR*VCRFPV
Trigger: CACTGGAAACCTGCAGACCCAGCGGTATCTAGAAGT...CTGGTCTGCTGTCGCTCTCAGTTCTCGATAGGTCAGAGCAGAGGTGGAAAAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR CCA 90 bp CTGGGGTCCCAGCTCTTTGTGAAGCTGTCTAGGGACTCACCAGCCTTCACTGATATAGGGACTGTTAGCTaGAGTCTGGAGTCTTACCAA +
Preference number: 4 (lower is better)
Translates to: LGSQLFVKLSRDSPAFTDIGTVS*SLESYQ
Trigger: TTGGTAAGACTCCAGACTCCAGCTAACAGTCCCTAT...ATCAGTGAAGGCTGGTGAGTCCCTAGACAGCTTCACAAAGAGCTGGGACCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR CCA 90 bp AGTGTGAGAACAATACCAGCCCTTCTTTTGTACCTCCTGCCTTTGTCAAGCCAACCACGGCACAGCACTTaGCTCACCTGTCCACTGAGA +
Preference number: 4 (lower is better)
Translates to: SVRTIPALLLYLLPLSSQPRHST*LTCPLR
Trigger: TCTCAGTGGACAGGTGAGCCAAGTGCTGTGCCGTGG...TTGGCTTGACAAAGGCAGGAGGTACAAAAGAAGGGCTGGTATTGTTCTCACACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR CCA 90 bp TGTTTTTCCACCTCTGCTCTGACCTATCGAGAACTGAGAGCGACAGCAGACCAGCTGTCTACCCAGGCCTaGAAGTCTCAGCAACCTAAA +
Preference number: 4 (lower is better)
Translates to: CFSTSALTYRELRATADQLSTQA*KSQQPK
Trigger: TTTAGGTTGCTGAGACTTCCAGGCCTGGGTAGACAG...CTGGTCTGCTGTCGCTCTCAGTTCTCGATAGGTCAGAGCAGAGGTGGAAAAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR CCA 90 bp TGTTTTTCCACCTCTGCTCTGACCTATCGAGAACTGAGAGCGACAGCAGACCAGTGTCTGGCACCTTTTTaGCTGAGCGCTGACTGCATA +
Preference number: 4 (lower is better)
Translates to: CFSTSALTYRELRATADQCLAPF*LSADCI
Trigger: TATGCAGTCAGCGCTCAGCCAAAAAGGTGCCAGACA...CTGGTCTGCTGTCGCTCTCAGTTCTCGATAGGTCAGAGCAGAGGTGGAAAAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR CCA 90 bp GTCCTTGAGAATGATAGGGCCAATCGCTCTAAACTCAGGACTGGCTGGCTTGTCAGGAGCATTTCTCCATaGAGCAAGTCCACAGCGGTA +
Preference number: 4 (lower is better)
Translates to: VLENDRANRSKLRTGWLVRSISP*SKSTAV
Trigger: TACCGCTGTGGACTTGCTCCATGGAGAAATGCTCCT...GACAAGCCAGCCAGTCCTGAGTTTAGAGCGATTGGCCCTATCATTCTCAAGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR CCA 90 bp ACTGAAGTATCGAGTCCTCTGCCCGGACTTTTCAGTACAGCCACAAGACCCATCAGGAGCATTTCTCCATaGAGCAAGTCCACAGCGGTA +
Preference number: 4 (lower is better)
Translates to: TEVSSPLPGLFSTATRPIRSISP*SKSTAV
Trigger: TACCGCTGTGGACTTGCTCCATGGAGAAATGCTCCT...GATGGGTCTTGTGGCTGTACTGAAAAGTCCGGGCAGAGGACTCGATACTTCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR CCA 90 bp TGTTTTTCCACCTCTGCTCTGACCTATCGAGAACTGAGAGCGACAGCAGACCAGCACCCTGAAGGAATGTaGCTGCCAGTTCTTCATGAC +
Preference number: 4 (lower is better)
Translates to: CFSTSALTYRELRATADQHPEGM*LPVLHD
Trigger: GTCATGAAGAACTGGCAGCCACATTCCTTCAGGGTG...CTGGTCTGCTGTCGCTCTCAGTTCTCGATAGGTCAGAGCAGAGGTGGAAAAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR CCA 90 bp AGGAACAGACCTCACCTGTCAGGTCTGTTTAGGGCATGGAAAAAGGAGGAGTCCCAGGTCTGCTGTGTCTaGGCAAACAGCTTTTGTGGA +
Preference number: 4 (lower is better)
Translates to: RNRPHLSGLFRAWKKEESQVCCV*ANSFCG
Trigger: TCCACAAAAGCTGTTTGCCCAGACACAGCAGACCTG...GGACTCCTCCTTTTTCCATGCCCTAAACAGACCTGACAGGTGAGGTCTGTTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR CCA 90 bp TGTTTTTCCACCTCTGCTCTGACCTATCGAGAACTGAGAGCGACAGCAGACCAGAGCAGCAATGGGCTTTaGCAGGGAAGTAGGAGCAAA +
Preference number: 4 (lower is better)
Translates to: CFSTSALTYRELRATADQSSNGL*QGSRSK
Trigger: TTTGCTCCTACTTCCCTGCCAAAGCCCATTGCTGCT...CTGGTCTGCTGTCGCTCTCAGTTCTCGATAGGTCAGAGCAGAGGTGGAAAAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR CCA 90 bp TGGTCGGAATGGGTGCTAAGGGCTCGGAATAGAGCTGCAGATTATAAAATTCATGCTAATGACATGCGCTaGAGGCGGAGTCCGGGCAGA +
Preference number: 4 (lower is better)
Translates to: WSEWVLRARNRAADYKIHANDMR*RRSPGR
Trigger: TCTGCCCGGACTCCGCCTCCAGCGCATGTCATTAGC...ATGAATTTTATAATCTGCAGCTCTATTCCGAGCCCTTAGCACCCATTCCGACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542447.6
CDS-3UTR TCA 90 bp ACTCTCTGGGGGAAACGAGGGCCATTTTCACTCTCGTACGCACTCTTCTCAAATACCTTCAGCATCAGCTaGCTGGTCACAGTGTACATG +
Preference number: 4 (lower is better)
Translates to: TLWGKRGPFSLSYALFSNTFSIS*LVTVYM
Trigger: CATGTACACTGTGACCAGTCAGCTGATGCTGAAGGT...ATTTGAGAAGAGTGCGTACGAGAGTGAAAATGGCCCTCGTTTCCCCCAGAGAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR TCA 90 bp TCTCATTGTGACACACCTCACTTGCAGATAACCCTGTACAGTAATGTAGTTCCATCTGCAGGTTTCCAGTaGCCGCAGGGTGCTCCACCT +
Preference number: 4 (lower is better)
Translates to: SHCDTPHLQITLYSNVVPSAGFQ*PQGAPP
Trigger: AGGTGGAGCACCCTGCGGTCACTGGAAACCTGCAGA...TGGAACTACATTACTGTACAGGGTTATCTGCAAGTGAGGTGTGTCACAATGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR TCA 90 bp CATTGTGACACACCTCACTTGCAGATAACCCTGTACAGTAATGTAGTTCCACAGACCTGCTCGGGAATCTaGGAGGTCCTCACTGTCCAG +
Preference number: 4 (lower is better)
Translates to: HCDTPHLQITLYSNVVPQTCSGI*EVLTVQ
Trigger: CTGGACAGTGAGGACCTCTCAGATTCCCGAGCAGGT...CTGTGGAACTACATTACTGTACAGGGTTATCTGCAAGTGAGGTGTGTCACAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000536727.5
CDS-3UTR TCA 90 bp GTCCTTGAGAATGATAGGGCCAATCGCTCTAAACTCAGGACTGGCTGGCTTGTCTGCCCTCTGTACTTTTaGCTCACATTCCTTCTCCAC +
Preference number: 4 (lower is better)
Translates to: VLENDRANRSKLRTGWLVCPLYF*LTFLLH
Trigger: GTGGAGAAGGAATGTGAGTCAAAAGTACAGAGGGCA...GACAAGCCAGCCAGTCCTGAGTTTAGAGCGATTGGCCCTATCATTCTCAAGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR TCA 90 bp AACCTTTCTGGACAGCGTAGGGTATCTATACTGAGCCGTCTACAGATACAGAATGCTGGGAGAGGTCACTaGAGTATCGAGTCCTCTGCC +
Preference number: 4 (lower is better)
Translates to: NLSGQRRVSILSRLQIQNAGRGH*SIESSA
Trigger: GGCAGAGGACTCGATACTTCAGTGACCTCTCCCAGC...ATTCTGTATCTGTAGACGGCTCAGTATAGATACCCTACGCTGTCCAGAAAGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR TCA 90 bp TGGTCGGAATGGGTGCTAAGGGCTCGGAATAGAGCTGCAGATTATAAAATTCATTGCAGAGCAAGAGACTaGAGCCAGGTAGGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: WSEWVLRARNRAADYKIHCRARD*SQVGWA
Trigger: AGCCCAGCCTACCTGGCTTCAGTCTCTTGCTCTGCA...ATGAATTTTATAATCTGCAGCTCTATTCCGAGCCCTTAGCACCCATTCCGACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR TCA 90 bp TGTTTTTCCACCTCTGCTCTGACCTATCGAGAACTGAGAGCGACAGCAGACCAGCGCACTCTTCTCAAATaGAGGAGTGGGCAACTTATC +
Preference number: 4 (lower is better)
Translates to: CFSTSALTYRELRATADQRTLLK*RSGQLI
Trigger: GATAAGTTGCCCACTCCTTCATTTGAGAAGAGTGCG...CTGGTCTGCTGTCGCTCTCAGTTCTCGATAGGTCAGAGCAGAGGTGGAAAAACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR TCA 90 bp TGTTTTTCCACCTCTGCTCTGACCTATCGAGAACTGAGAGCGACAGCAGACCAGCTCCCTTTAATCAGCTaGTACTTGCTGGGTGACTAC +
Preference number: 4 (lower is better)
Translates to: CFSTSALTYRELRATADQLPLIS*YLLGDY
Trigger: GTAGTCACCCAGCAAGTATCAGCTGATTAAAGGGAG...CTGGTCTGCTGTCGCTCTCAGTTCTCGATAGGTCAGAGCAGAGGTGGAAAAACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR TCA 90 bp TCCTCTACCTTTTCCCGAGGCTCCCCATCTAAGATATGTTCAAGGTCACTGATTCCTTCACGGCCAACCTaGAAGCCACCTGTAGTAAGG +
Preference number: 4 (lower is better)
Translates to: SSTFSRGSPSKICSRSLIPSRPT*KPPVVR
Trigger: CCTTACTACAGGTGGCTTTCAGGTTGGCCGTGAAGG...AATCAGTGACCTTGAACATATCTTAGATGGGGAGCCTCGGGAAAAGGTAGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR TCA 90 bp TGGAAAAAGGAGGAGTCCTTTCTGCCCCAAACCTTTCTGGACAGCGTAGGGTATGAAGAGGCTGGAAGCTaGGGTTTGGAACACCTGAAA +
Preference number: 4 (lower is better)
Translates to: WKKEESFLPQTFLDSVGYEEAGS*GLEHLK
Trigger: TTTCAGGTGTTCCAAACCTCAGCTTCCAGCCTCTTC...ATACCCTACGCTGTCCAGAAAGGTTTGGGGCAGAAAGGACTCCTCCTTTTTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR GCA 90 bp AGGAACAGACCTCACCTGTCAGGTCTGTTTAGGGCATGGAAAAAGGAGGAGTCCTTCGTAAACAGATTCTaGCCATCACCTGTGGGGATC +
Preference number: 4 (lower is better)
Translates to: RNRPHLSGLFRAWKKEESFVNRF*PSPVGI
Trigger: GATCCCCACAGGTGATGGGCAGAATCTGTTTACGAA...GGACTCCTCCTTTTTCCATGCCCTAAACAGACCTGACAGGTGAGGTCTGTTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR GCA 90 bp AGTGTGAGAACAATACCAGCCCTTCTTTTGTACCTCCTGCCTTTGTCAAGCCAAAGTAAGGCCGTGAACTaGTGGTTCTGTCGTCGCCGT +
Preference number: 4 (lower is better)
Translates to: SVRTIPALLLYLLPLSSQSKAVN*WFCRRR
Trigger: ACGGCGACGACAGAACCAGCAGTTCACGGCCTTACT...TTGGCTTGACAAAGGCAGGAGGTACAAAAGAAGGGCTGGTATTGTTCTCACACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000536727.5
CDS-3UTR GCA 90 bp AACCTTTCTGGACAGCGTAGGGTATCTATACTGAGCCGTCTACAGATACAGAATTGTGTCTGCGTCTGCTaGGTCATCGGCTCCTTTGGC +
Preference number: 4 (lower is better)
Translates to: NLSGQRRVSILSRLQIQNCVCVC*VIGSFG
Trigger: GCCAAAGGAGCCGATGACGCAGCAGACGCAGACACA...ATTCTGTATCTGTAGACGGCTCAGTATAGATACCCTACGCTGTCCAGAAAGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR GCA 90 bp TTTGCAATCTACCTGAGACGGAAAACACCAATCGCAACACATGAACCTGAGACATGTGTCTGCGTCTGCTaGGTCATCGGCTCCTTTGGC +
Preference number: 4 (lower is better)
Translates to: FAIYLRRKTPIATHEPETCVCVC*VIGSFG
Trigger: GCCAAAGGAGCCGATGACGCAGCAGACGCAGACACA...TGTCTCAGGTTCATGTGTTGCGATTGGTGTTTTCCGTCTCAGGTAGATTGCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000542447.6
CDS-3UTR GCA 90 bp CAATGTGTGGGGCCTACACTTTGCAATCTACCTGAGACGGAAAACACCAATCGCAGGAGGAGTCCTTTCTaGCCCAAACCTTTCTGGACA +
Preference number: 4 (lower is better)
Translates to: QCVGPTLCNLPETENTNRRRSPF*PKPFWT
Trigger: TGTCCAGAAAGGTTTGGGGCAGAAAGGACTCCTCCT...GCGATTGGTGTTTTCCGTCTCAGGTAGATTGCAAAGTGTAGGCCCCACACATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000542447.6
CDS-3UTR GCA 90 bp TGGAAAAAGGAGGAGTCCTTTCTGCCCCAAACCTTTCTGGACAGCGTAGGGTATGCTATGCACTATGGCTaGCATCATGCGAGGATCAGT +
Preference number: 4 (lower is better)
Translates to: WKKEESFLPQTFLDSVGYAMHYG*HHARIS
Trigger: ACTGATCCTCGCATGATGGCAGCCATAGTGCATAGC...ATACCCTACGCTGTCCAGAAAGGTTTGGGGCAGAAAGGACTCCTCCTTTTTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR GCA 90 bp ATGGAAAAAGGAGGAGTCCTTTCTGCCCCAAACCTTTCTGGACAGCGTAGGGTAGCTATGCACTATGGCTaGCATCATGCGAGGATCAGT +
Preference number: 4 (lower is better)
Translates to: MEKGGVLSAPNLSGQRRVAMHYG*HHARIS
Trigger: ACTGATCCTCGCATGATGGCAGCCATAGTGCATAGC...TACCCTACGCTGTCCAGAAAGGTTTGGGGCAGAAAGGACTCCTCCTTTTTCCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR GCA 90 bp GACTCCTCTACCTTTTCCCGAGGCTCCCCATCTAAGATATGTTCAAGGTCACTGGCTATGCACTATGGCTaGCATCATGCGAGGATCAGT +
Preference number: 4 (lower is better)
Translates to: DSSTFSRGSPSKICSRSLAMHYG*HHARIS
Trigger: ACTGATCCTCGCATGATGGCAGCCATAGTGCATAGC...CAGTGACCTTGAACATATCTTAGATGGGGAGCCTCGGGAAAAGGTAGAGGAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR GCA 90 bp ACTGAAGTATCGAGTCCTCTGCCCGGACTTTTCAGTACAGCCACAAGACCCATCAAGTATCGAGTCCTCTaGCCGGACTTTTCAGTACAG +
Preference number: 4 (lower is better)
Translates to: TEVSSPLPGLFSTATRPIKYRVL*PDFSVQ
Trigger: CTGTACTGAAAAGTCCGGGCAGAGGACTCGATACTT...GATGGGTCTTGTGGCTGTACTGAAAAGTCCGGGCAGAGGACTCGATACTTCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR GCA 90 bp GTCCTTGAGAATGATAGGGCCAATCGCTCTAAACTCAGGACTGGCTGGCTTGTCCATGATGTGTCTATATaGAGAGGAGCCCTCAGAGCT +
Preference number: 4 (lower is better)
Translates to: VLENDRANRSKLRTGWLVHDVSI*RGALRA
Trigger: AGCTCTGAGGGCTCCTCTGCATATAGACACATCATG...GACAAGCCAGCCAGTCCTGAGTTTAGAGCGATTGGCCCTATCATTCTCAAGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR GCA 90 bp ATACTATGGTCGGAATGGGTGCTAAGGGCTCGGAATAGAGCTGCAGATTATAAAATGACTGTGAGCCTGTaGACGTCTGGAGGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: ILWSEWVLRARNRAADYKMTVSL*TSGGQL
Trigger: CAGCTGCCCTCCAGACGTGCACAGGCTCACAGTCAT...TTTATAATCTGCAGCTCTATTCCGAGCCCTTAGCACCCATTCCGACCATAGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR GCA 90 bp TTGGCAACTGATGGTCGCAACCTCTCCCTCGATCACTGTCACGTCTTTCGTAAATTCGTAAACAGATTCTaGCCATCACCTGAGCACGGG +
Preference number: 4 (lower is better)
Translates to: LATDGRNLSLDHCHVFRKFVNRF*PSPEHG
Trigger: CCCGTGCTCAGGTGATGGGCAGAATCTGTTTACGAA...TTTACGAAAGACGTGACAGTGATCGAGGGAGAGGTTGCGACCATCAGTTGCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540951.1
CDS-3UTR GCA 90 bp TGTTTTTCCACCTCTGCTCTGACCTATCGAGAACTGAGAGCGACAGCAGACCAGCGAGCCTTCTTCACCTaGTCGGGAATCGTATACATA +
Preference number: 4 (lower is better)
Translates to: CFSTSALTYRELRATADQRAFFT*SGIVYI
Trigger: TATGTATACGATTCCCGAGCAGGTGAAGAAGGCTCG...CTGGTCTGCTGTCGCTCTCAGTTCTCGATAGGTCAGAGCAGAGGTGGAAAAACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542447.6
CDS-3UTR GCA 90 bp AGGAACAGACCTCACCTGTCAGGTCTGTTTAGGGCATGGAAAAAGGAGGAGTCCCGAGCCTTCTTCACCTaGTCGGGAATCGTATACATA +
Preference number: 4 (lower is better)
Translates to: RNRPHLSGLFRAWKKEESRAFFT*SGIVYI
Trigger: TATGTATACGATTCCCGAGCAGGTGAAGAAGGCTCG...GGACTCCTCCTTTTTCCATGCCCTAAACAGACCTGACAGGTGAGGTCTGTTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000542447.6
ENST00000545380.5
CDS-3UTR CCA 90 bp AAGAGTCTAAGGAATCCCAGCAGGCAAATTCCAAAATGGGAGATTTTGGAAAAATCTGCCCATCACCTGTaGGGATCAGTGCCGCGGCGG +
Preference number: 4 (lower is better)
Translates to: KSLRNPSRQIPKWEILEKSAHHL*GSVPRR
Trigger: CCGCCGCGGCACTGATCCCCACAGGTGATGGGCAGA...TTTTTCCAAAATCTCCCATTTTGGAATTTGCCTGCTGGGATTCCTTAGACTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR CCA 90 bp TGGAAAAAGGAGGAGTCCTTTCTGCCCCAAACCTTTCTGGACAGCGTAGGGTATGGTGTAACTTTCCTGTaGGGGATCGGTATAGAGCTG +
Preference number: 4 (lower is better)
Translates to: WKKEESFLPQTFLDSVGYGVTFL*GIGIEL
Trigger: CAGCTCTATACCGATCCCCCACAGGAAAGTTACACC...ATACCCTACGCTGTCCAGAAAGGTTTGGGGCAGAAAGGACTCCTCCTTTTTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR CCA 90 bp AGTGTGAGAACAATACCAGCCCTTCTTTTGTACCTCCTGCCTTTGTCAAGCCAACCTGATAGTCGTGGCTaGCTTGCTGGCCATAGCAGT +
Preference number: 4 (lower is better)
Translates to: SVRTIPALLLYLLPLSSQPDSRG*LAGHSS
Trigger: ACTGCTATGGCCAGCAAGCCAGCCACGACTATCAGG...TTGGCTTGACAAAGGCAGGAGGTACAAAAGAAGGGCTGGTATTGTTCTCACACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR CCA 90 bp TGTTTTTCCACCTCTGCTCTGACCTATCGAGAACTGAGAGCGACAGCAGACCAGTCAGCATCAGCTGACTaGTCACAGTGTACATGTCTG +
Preference number: 4 (lower is better)
Translates to: CFSTSALTYRELRATADQSASAD*SQCTCL
Trigger: CAGACATGTACACTGTGACCAGTCAGCTGATGCTGA...CTGGTCTGCTGTCGCTCTCAGTTCTCGATAGGTCAGAGCAGAGGTGGAAAAACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR CCA 90 bp AACCTTTCTGGACAGCGTAGGGTATCTATACTGAGCCGTCTACAGATACAGAATCACCTGGCAGATCACTaGGACCCCATCGTCCTCCTT +
Preference number: 4 (lower is better)
Translates to: NLSGQRRVSILSRLQIQNHLADH*DPIVLL
Trigger: AAGGAGGACGATGGGGTCCCAGTGATCTGCCAGGTG...ATTCTGTATCTGTAGACGGCTCAGTATAGATACCCTACGCTGTCCAGAAAGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR CCA 90 bp GGGAAGGAAAAGAGTCTAAGGAATCCCAGCAGGCAAATTCCAAAATGGGAGATTCACCTGGCAGATCACTaGGACCCCATCGTCCTCCTT +
Preference number: 4 (lower is better)
Translates to: GKEKSLRNPSRQIPKWEIHLADH*DPIVLL
Trigger: AAGGAGGACGATGGGGTCCCAGTGATCTGCCAGGTG...AATCTCCCATTTTGGAATTTGCCTGCTGGGATTCCTTAGACTCTTTTCCTTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR CCA 90 bp GACTCCTCTACCTTTTCCCGAGGCTCCCCATCTAAGATATGTTCAAGGTCACTGACTTCTAGATACCGCTaGGTCTGCAGGTTTCCAGTG +
Preference number: 4 (lower is better)
Translates to: DSSTFSRGSPSKICSRSLTSRYR*VCRFPV
Trigger: CACTGGAAACCTGCAGACCCAGCGGTATCTAGAAGT...CAGTGACCTTGAACATATCTTAGATGGGGAGCCTCGGGAAAAGGTAGAGGAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR CCA 90 bp TTCTCACCCTTTGATATGATTATACTATGGTCGGAATGGGTGCTAAGGGCTCGGGTTACCATCACAGGCTaGGGCTTCCCGATGGCTTCA +
Preference number: 4 (lower is better)
Translates to: FSPFDMIILWSEWVLRARVTITG*GFPMAS
Trigger: TGAAGCCATCGGGAAGCCCCAGCCTGTGATGGTAAC...CCGAGCCCTTAGCACCCATTCCGACCATAGTATAATCATATCAAAGGGTGAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR CCA 90 bp TTTGCAATCTACCTGAGACGGAAAACACCAATCGCAACACATGAACCTGAGACATGGTGGTGGTGGTGGTaGTGGTTGTTGTGGGAGGAG +
Preference number: 4 (lower is better)
Translates to: FAIYLRRKTPIATHEPETWWWWW*WLLWEE
Trigger: CTCCTCCCACAACAACCACCACCACCACCACCACCA...TGTCTCAGGTTCATGTGTTGCGATTGGTGTTTTCCGTCTCAGGTAGATTGCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR CCA 90 bp ACTGAAGTATCGAGTCCTCTGCCCGGACTTTTCAGTACAGCCACAAGACCCATCAAAGTAAGAGACAGGTaGAGCAGCCAACACAGGGAA +
Preference number: 4 (lower is better)
Translates to: TEVSSPLPGLFSTATRPIKVRDR*SSQHRE
Trigger: TTCCCTGTGTTGGCTGCTCCACCTGTCTCTTACTTT...GATGGGTCTTGTGGCTGTACTGAAAAGTCCGGGCAGAGGACTCGATACTTCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR CCA 90 bp ATGGAAAAAGGAGGAGTCCTTTCTGCCCCAAACCTTTCTGGACAGCGTAGGGTACTGTCTACCCAGGCCTaGAAGTCTCAGCAACCTAAA +
Preference number: 4 (lower is better)
Translates to: MEKGGVLSAPNLSGQRRVLSTQA*KSQQPK
Trigger: TTTAGGTTGCTGAGACTTCCAGGCCTGGGTAGACAG...TACCCTACGCTGTCCAGAAAGGTTTGGGGCAGAAAGGACTCCTCCTTTTTCCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR CCA 90 bp AACCTTTCTGGACAGCGTAGGGTATCTATACTGAGCCGTCTACAGATACAGAATCAGCTGAGGGGATGGTaGGAAAAGGGCACTTTGGGC +
Preference number: 4 (lower is better)
Translates to: NLSGQRRVSILSRLQIQNQLRGW*EKGTLG
Trigger: GCCCAAAGTGCCCTTTTCCCACCATCCCCTCAGCTG...ATTCTGTATCTGTAGACGGCTCAGTATAGATACCCTACGCTGTCCAGAAAGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR CCA 90 bp TCCTCTACCTTTTCCCGAGGCTCCCCATCTAAGATATGTTCAAGGTCACTGATTTCAGTGGGGCACCCATaGCTCAGGGTCACTTCAAGT +
Preference number: 4 (lower is better)
Translates to: SSTFSRGSPSKICSRSLISVGHP*LRVTSS
Trigger: ACTTGAAGTGACCCTGAGCCATGGGTGCCCCACTGA...AATCAGTGACCTTGAACATATCTTAGATGGGGAGCCTCGGGAAAAGGTAGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR CCA 90 bp GACTCCTCTACCTTTTCCCGAGGCTCCCCATCTAAGATATGTTCAAGGTCACTGTGTCTGGCACCTTTTTaGCTGAGCGCTGACTGCATA +
Preference number: 4 (lower is better)
Translates to: DSSTFSRGSPSKICSRSLCLAPF*LSADCI
Trigger: TATGCAGTCAGCGCTCAGCCAAAAAGGTGCCAGACA...CAGTGACCTTGAACATATCTTAGATGGGGAGCCTCGGGAAAAGGTAGAGGAGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR CCA 90 bp ACTCTCTGGGGGAAACGAGGGCCATTTTCACTCTCGTACGCACTCTTCTCAAATCACCCTGAAGGAATGTaGCTGCCAGTTCTTCATGAC +
Preference number: 4 (lower is better)
Translates to: TLWGKRGPFSLSYALFSNHPEGM*LPVLHD
Trigger: GTCATGAAGAACTGGCAGCCACATTCCTTCAGGGTG...ATTTGAGAAGAGTGCGTACGAGAGTGAAAATGGCCCTCGTTTCCCCCAGAGAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR CCA 90 bp AATGAAAGTTTCACACAGATTCGAGTTGGAAATCCCAGCATGACAAATATCTGTTCAGACTGGCGGCGTTaGCTGCCTCCGGAGCCCGAG +
Preference number: 4 (lower is better)
Translates to: NESFTQIRVGNPSMTNICSDWRR*LPPEPE
Trigger: CTCGGGCTCCGGAGGCAGCCAACGCCGCCAGTCTGA...ACAGATATTTGTCATGCTGGGATTTCCAACTCGAATCTGTGTGAAACTTTCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542447.6
3UTR CAA 72 bp TTCTCCCCATACAAATCAGCAGGCTGGCTGGGCTTGTaGCCCTCTGTACTTTTGACTCACATTCCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: FSPYKSAGWLGL*PSVLLTHIPSP
Trigger: TGGAGAAGGAATGTGAGTCAAAAGTACAGAGGGCAACAAGCCCAGCCAGCCTGCTGATTTGTATGGGGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
3UTR CAA 72 bp TCCTTTGAGCGGGGACGGCTTCTAGCACCTTCTCATTaGCATACCCTGTGGAGCTCAAAAGGCAAATGTACA +
Preference number: 4 (lower is better)
Translates to: SFERGRLLAPSH*HTLWSSKGKCT
Trigger: TGTACATTTGCCTTTTGAGCTCCACAGGGTATGCAAATGAGAAGGTGCTAGAAGCCGTCCCCGCTCAAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR TCA 90 bp ATGGAAAAAGGAGGAGTCCTTTCTGCCCCAAACCTTTCTGGACAGCGTAGGGTATTGGGATTCAGTAGCTaGATCACAGAGTCGTCACTC +
Preference number: 4 (lower is better)
Translates to: MEKGGVLSAPNLSGQRRVLGFSS*ITESSL
Trigger: GAGTGACGACTCTGTGATTCAGCTACTGAATCCCAA...TACCCTACGCTGTCCAGAAAGGTTTGGGGCAGAAAGGACTCCTCCTTTTTCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR TCA 90 bp GACTCCTCTACCTTTTCCCGAGGCTCCCCATCTAAGATATGTTCAAGGTCACTGTTGGGATTCAGTAGCTaGATCACAGAGTCGTCACTC +
Preference number: 4 (lower is better)
Translates to: DSSTFSRGSPSKICSRSLLGFSS*ITESSL
Trigger: GAGTGACGACTCTGTGATTCAGCTACTGAATCCCAA...CAGTGACCTTGAACATATCTTAGATGGGGAGCCTCGGGAAAAGGTAGAGGAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR TCA 90 bp TTGGCAACTGATGGTCGCAACCTCTCCCTCGATCACTGTCACGTCTTTCGTAAATTGGGATTCAGTAGCTaGATCACAGAGTCGTCACTC +
Preference number: 4 (lower is better)
Translates to: LATDGRNLSLDHCHVFRKLGFSS*ITESSL
Trigger: GAGTGACGACTCTGTGATTCAGCTACTGAATCCCAA...TTTACGAAAGACGTGACAGTGATCGAGGGAGAGGTTGCGACCATCAGTTGCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540951.1
CDS-3UTR TCA 90 bp AATTTGTCCACTTATATAAAAGGAACAGACCTCACCTGTCAGGTCTGTTTAGGGTCTGCAGGTTTCCAGTaGCCGCAGGGTGCTCCACCT +
Preference number: 4 (lower is better)
Translates to: NLSTYIKGTDLTCQVCLGSAGFQ*PQGAPP
Trigger: AGGTGGAGCACCCTGCGGTCACTGGAAACCTGCAGA...CCCTAAACAGACCTGACAGGTGAGGTCTGTTCCTTTTATATAAGTGGACAAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR TCA 90 bp GAAGGAAAAGAGTCTAAGGAATCCCAGCAGGCAAATTCCAAAATGGGAGATTTTTCTGCAGGTTTCCAGTaGCCGCAGGGTGCTCCACCT +
Preference number: 4 (lower is better)
Translates to: EGKESKESQQANSKMGDFSAGFQ*PQGAPP
Trigger: AGGTGGAGCACCCTGCGGTCACTGGAAACCTGCAGA...AAAATCTCCCATTTTGGAATTTGCCTGCTGGGATTCCTTAGACTCTTTTCCTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR TCA 90 bp CCCTTTGATATGATTATACTATGGTCGGAATGGGTGCTAAGGGCTCGGAATAGACATGATCCACTGCCCTaGTCGAGCCTTCTTCACCTG +
Preference number: 4 (lower is better)
Translates to: PFDMIILWSEWVLRARNRHDPLP*SSLLHL
Trigger: CAGGTGAAGAAGGCTCGATCAGGGCAGTGGATCATG...TCTATTCCGAGCCCTTAGCACCCATTCCGACCATAGTATAATCATATCAAAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR TCA 90 bp GAAGGAAAAGAGTCTAAGGAATCCCAGCAGGCAAATTCCAAAATGGGAGATTTTCCACCGATCACGGCATaGTCCACTGCCCTGATCGAG +
Preference number: 4 (lower is better)
Translates to: EGKESKESQQANSKMGDFPPITA*STALIE
Trigger: CTCGATCAGGGCAGTGGATCATGCCGTGATCGGTGG...AAAATCTCCCATTTTGGAATTTGCCTGCTGGGATTCCTTAGACTCTTTTCCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR TCA 90 bp AGGAACAGACCTCACCTGTCAGGTCTGTTTAGGGCATGGAAAAAGGAGGAGTCCGTAGGGTATCTATACTaGGCCGTCTACAGATACAGA +
Preference number: 4 (lower is better)
Translates to: RNRPHLSGLFRAWKKEESVGYLY*AVYRYR
Trigger: TCTGTATCTGTAGACGGCTCAGTATAGATACCCTAC...GGACTCCTCCTTTTTCCATGCCCTAAACAGACCTGACAGGTGAGGTCTGTTCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR TCA 90 bp AGGAACAGACCTCACCTGTCAGGTCTGTTTAGGGCATGGAAAAAGGAGGAGTCCACTTTGCAATCTACCTaGGACGGAAAACACCAATCG +
Preference number: 4 (lower is better)
Translates to: RNRPHLSGLFRAWKKEESTLQST*DGKHQS
Trigger: CGATTGGTGTTTTCCGTCTCAGGTAGATTGCAAAGT...GGACTCCTCCTTTTTCCATGCCCTAAACAGACCTGACAGGTGAGGTCTGTTCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000542447.6
CDS-3UTR TCA 90 bp CAATGTGTGGGGCCTACACTTTGCAATCTACCTGAGACGGAAAACACCAATCGCTGCCCTCTGTACTTTTaGCTCACATTCCTTCTCCAC +
Preference number: 4 (lower is better)
Translates to: QCVGPTLCNLPETENTNRCPLYF*LTFLLH
Trigger: GTGGAGAAGGAATGTGAGTCAAAAGTACAGAGGGCA...GCGATTGGTGTTTTCCGTCTCAGGTAGATTGCAAAGTGTAGGCCCCACACATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR TCA 90 bp GTCCTTGAGAATGATAGGGCCAATCGCTCTAAACTCAGGACTGGCTGGCTTGTCAGGCCAAAACATTTGTaGAAACTCTCTGGGGGAAAC +
Preference number: 4 (lower is better)
Translates to: VLENDRANRSKLRTGWLVRPKHL*KLSGGN
Trigger: GTTTCCCCCAGAGAGTTTTCACAAATGTTTTGGCCT...GACAAGCCAGCCAGTCCTGAGTTTAGAGCGATTGGCCCTATCATTCTCAAGGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR GCA 90 bp ACTCTCTGGGGGAAACGAGGGCCATTTTCACTCTCGTACGCACTCTTCTCAAATTTCGTAAACAGATTCTaGCCATCACCTGTGGGGATC +
Preference number: 4 (lower is better)
Translates to: TLWGKRGPFSLSYALFSNFVNRF*PSPVGI
Trigger: GATCCCCACAGGTGATGGGCAGAATCTGTTTACGAA...ATTTGAGAAGAGTGCGTACGAGAGTGAAAATGGCCCTCGTTTCCCCCAGAGAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR GCA 90 bp AACCTTTCTGGACAGCGTAGGGTATCTATACTGAGCCGTCTACAGATACAGAATAGATACCGCTGGGTCTaGAGGTTTCCAGTGACCGCA +
Preference number: 4 (lower is better)
Translates to: NLSGQRRVSILSRLQIQNRYRWV*RFPVTA
Trigger: TGCGGTCACTGGAAACCTGCAGACCCAGCGGTATCT...ATTCTGTATCTGTAGACGGCTCAGTATAGATACCCTACGCTGTCCAGAAAGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR GCA 90 bp CCCTTTGATATGATTATACTATGGTCGGAATGGGTGCTAAGGGCTCGGAATAGAAGCTGTGTCTGCGTCTaGTGCGTCATCGGCTCCTTT +
Preference number: 4 (lower is better)
Translates to: PFDMIILWSEWVLRARNRSCVCV*CVIGSF
Trigger: AAAGGAGCCGATGACGCAGCAGACGCAGACACAGCT...TCTATTCCGAGCCCTTAGCACCCATTCCGACCATAGTATAATCATATCAAAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR GCA 90 bp AACCTTTCTGGACAGCGTAGGGTATCTATACTGAGCCGTCTACAGATACAGAATAGCTGTGTCTGCGTCTaGTGCGTCATCGGCTCCTTT +
Preference number: 4 (lower is better)
Translates to: NLSGQRRVSILSRLQIQNSCVCV*CVIGSF
Trigger: AAAGGAGCCGATGACGCAGCAGACGCAGACACAGCT...ATTCTGTATCTGTAGACGGCTCAGTATAGATACCCTACGCTGTCCAGAAAGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR GCA 90 bp CATTGTGACACACCTCACTTGCAGATAACCCTGTACAGTAATGTAGTTCCACAGAGCTGTGTCTGCGTCTaGTGCGTCATCGGCTCCTTT +
Preference number: 4 (lower is better)
Translates to: HCDTPHLQITLYSNVVPQSCVCV*CVIGSF
Trigger: AAAGGAGCCGATGACGCAGCAGACGCAGACACAGCT...CTGTGGAACTACATTACTGTACAGGGTTATCTGCAAGTGAGGTGTGTCACAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR GCA 90 bp AGGAACAGACCTCACCTGTCAGGTCTGTTTAGGGCATGGAAAAAGGAGGAGTCCGTAATATACAGTACATaGAGGCCACATCCTACTGCC +
Preference number: 4 (lower is better)
Translates to: RNRPHLSGLFRAWKKEESVIYST*RPHPTA
Trigger: GGCAGTAGGATGTGGCCTGCATGTACTGTATATTAC...GGACTCCTCCTTTTTCCATGCCCTAAACAGACCTGACAGGTGAGGTCTGTTCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR GCA 90 bp ACTGAAGTATCGAGTCCTCTGCCCGGACTTTTCAGTACAGCCACAAGACCCATCTGGCCAGACGTTATCTaGACATTTATAAGATCGGCC +
Preference number: 4 (lower is better)
Translates to: TEVSSPLPGLFSTATRPIWPDVI*TFIRSA
Trigger: GGCCGATCTTATAAATGTGCAGATAACGTCTGGCCA...GATGGGTCTTGTGGCTGTACTGAAAAGTCCGGGCAGAGGACTCGATACTTCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR GCA 90 bp TGGTCGGAATGGGTGCTAAGGGCTCGGAATAGAGCTGCAGATTATAAAATTCATCTGCATCCCTCACCATaGTGGACATACAGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: WSEWVLRARNRAADYKIHLHPSP*WTYSRC
Trigger: GCACCTGCTGTATGTCCAGCATGGTGAGGGATGCAG...ATGAATTTTATAATCTGCAGCTCTATTCCGAGCCCTTAGCACCCATTCCGACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR GCA 90 bp TGGAAAAAGGAGGAGTCCTTTCTGCCCCAAACCTTTCTGGACAGCGTAGGGTATCATGATGTGTCTATATaGAGAGGAGCCCTCAGAGCT +
Preference number: 4 (lower is better)
Translates to: WKKEESFLPQTFLDSVGYHDVSI*RGALRA
Trigger: AGCTCTGAGGGCTCCTCTGCATATAGACACATCATG...ATACCCTACGCTGTCCAGAAAGGTTTGGGGCAGAAAGGACTCCTCCTTTTTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR GCA 90 bp GAGCAAATCCTGCTGTCTACCCAGGCCTGGAAGTCTCAGCAACCTAAACAGCAATGGGTGACTACTGCGTaGCTGACAGGAACTTTAATA +
Preference number: 4 (lower is better)
Translates to: EQILLSTQAWKSQQPKQQWVTTA*LTGTLI
Trigger: TATTAAAGTTCCTGTCAGGCACGCAGTAGTCACCCA...TTGCTGTTTAGGTTGCTGAGACTTCCAGGCCTGGGTAGACAGCAGGATTTGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR CCA 90 bp GAGTTTTCATTGTTTGTTCACCCAAATCTTTACGACAACAGAGAAGAATGCATTGCTGCCGCCGCACACTaGGATCCGCTCGGCAGCACT +
Preference number: 4 (lower is better)
Translates to: EFSLFVHPNLYDNREECIAAAAH*DPLGST
Trigger: AGTGCTGCCGAGCGGATCCCAGTGTGCGGCGGCAGC...AATGCATTCTTCTCTGTTGTCGTAAAGATTTGGGTGAACAAACAATGAAAACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR CCA 90 bp GACTCCTCTACCTTTTCCCGAGGCTCCCCATCTAAGATATGTTCAAGGTCACTGGATCATCAGATTACGTaGTGGGACCAGGACTGTGAT +
Preference number: 4 (lower is better)
Translates to: DSSTFSRGSPSKICSRSLDHQIT*WDQDCD
Trigger: ATCACAGTCCTGGTCCCACCACGTAATCTGATGATC...CAGTGACCTTGAACATATCTTAGATGGGGAGCCTCGGGAAAAGGTAGAGGAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR CCA 90 bp CCCTTTGATATGATTATACTATGGTCGGAATGGGTGCTAAGGGCTCGGAATAGACCTGATAGTCGTGGCTaGCTTGCTGGCCATAGCAGT +
Preference number: 4 (lower is better)
Translates to: PFDMIILWSEWVLRARNRPDSRG*LAGHSS
Trigger: ACTGCTATGGCCAGCAAGCCAGCCACGACTATCAGG...TCTATTCCGAGCCCTTAGCACCCATTCCGACCATAGTATAATCATATCAAAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR CCA 90 bp ATACTATGGTCGGAATGGGTGCTAAGGGCTCGGAATAGAGCTGCAGATTATAAACCTGATAGTCGTGGCTaGCTTGCTGGCCATAGCAGT +
Preference number: 4 (lower is better)
Translates to: ILWSEWVLRARNRAADYKPDSRG*LAGHSS
Trigger: ACTGCTATGGCCAGCAAGCCAGCCACGACTATCAGG...TTTATAATCTGCAGCTCTATTCCGAGCCCTTAGCACCCATTCCGACCATAGTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR CCA 90 bp GGGAAGGAAAAGAGTCTAAGGAATCCCAGCAGGCAAATTCCAAAATGGGAGATTCCTGATAGTCGTGGCTaGCTTGCTGGCCATAGCAGT +
Preference number: 4 (lower is better)
Translates to: GKEKSLRNPSRQIPKWEIPDSRG*LAGHSS
Trigger: ACTGCTATGGCCAGCAAGCCAGCCACGACTATCAGG...AATCTCCCATTTTGGAATTTGCCTGCTGGGATTCCTTAGACTCTTTTCCTTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR CCA 90 bp TCTCATTGTGACACACCTCACTTGCAGATAACCCTGTACAGTAATGTAGTTCCACACCTGGCAGATCACTaGGACCCCATCGTCCTCCTT +
Preference number: 4 (lower is better)
Translates to: SHCDTPHLQITLYSNVVPHLADH*DPIVLL
Trigger: AAGGAGGACGATGGGGTCCCAGTGATCTGCCAGGTG...TGGAACTACATTACTGTACAGGGTTATCTGCAAGTGAGGTGTGTCACAATGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR CCA 90 bp ATACTATGGTCGGAATGGGTGCTAAGGGCTCGGAATAGAGCTGCAGATTATAAAGTTACCATCACAGGCTaGGGCTTCCCGATGGCTTCA +
Preference number: 4 (lower is better)
Translates to: ILWSEWVLRARNRAADYKVTITG*GFPMAS
Trigger: TGAAGCCATCGGGAAGCCCCAGCCTGTGATGGTAAC...TTTATAATCTGCAGCTCTATTCCGAGCCCTTAGCACCCATTCCGACCATAGTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR CCA 90 bp TGGTCGGAATGGGTGCTAAGGGCTCGGAATAGAGCTGCAGATTATAAAATTCATAAGGCCGTGAACTGCTaGTTCTGTCGTCGCCGTTGT +
Preference number: 4 (lower is better)
Translates to: WSEWVLRARNRAADYKIHKAVNC*FCRRRC
Trigger: ACAACGGCGACGACAGAACCAGCAGTTCACGGCCTT...ATGAATTTTATAATCTGCAGCTCTATTCCGAGCCCTTAGCACCCATTCCGACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000536727.5
CDS-3UTR CCA 90 bp TGTTTTTCCACCTCTGCTCTGACCTATCGAGAACTGAGAGCGACAGCAGACCAGCTACTTCCCCTCCTGTaGCAACTCAAAATTTGTCCA +
Preference number: 4 (lower is better)
Translates to: CFSTSALTYRELRATADQLLPLL*QLKICP
Trigger: TGGACAAATTTTGAGTTGCCACAGGAGGGGAAGTAG...CTGGTCTGCTGTCGCTCTCAGTTCTCGATAGGTCAGAGCAGAGGTGGAAAAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR CCA 90 bp TGGAAAAAGGAGGAGTCCTTTCTGCCCCAAACCTTTCTGGACAGCGTAGGGTATAGTAGCTATGCACTATaGCTGCCATCATGCGAGGAT +
Preference number: 4 (lower is better)
Translates to: WKKEESFLPQTFLDSVGYSSYAL*LPSCED
Trigger: ATCCTCGCATGATGGCAGCCATAGTGCATAGCTACT...ATACCCTACGCTGTCCAGAAAGGTTTGGGGCAGAAAGGACTCCTCCTTTTTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR CCA 90 bp AGGAACAGACCTCACCTGTCAGGTCTGTTTAGGGCATGGAAAAAGGAGGAGTCCATAGGGACTGTTAGCTaGAGTCTGGAGTCTTACCAA +
Preference number: 4 (lower is better)
Translates to: RNRPHLSGLFRAWKKEESIGTVS*SLESYQ
Trigger: TTGGTAAGACTCCAGACTCCAGCTAACAGTCCCTAT...GGACTCCTCCTTTTTCCATGCCCTAAACAGACCTGACAGGTGAGGTCTGTTCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR CCA 90 bp GACTCCTCTACCTTTTCCCGAGGCTCCCCATCTAAGATATGTTCAAGGTCACTGATACTATGGTCGGAATaGGTGCTAAGGGCTCGGAAT +
Preference number: 4 (lower is better)
Translates to: DSSTFSRGSPSKICSRSLILWSE*VLRARN
Trigger: ATTCCGAGCCCTTAGCACCCATTCCGACCATAGTAT...CAGTGACCTTGAACATATCTTAGATGGGGAGCCTCGGGAAAAGGTAGAGGAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR CCA 90 bp TGGAAAAAGGAGGAGTCCTTTCTGCCCCAAACCTTTCTGGACAGCGTAGGGTATATACTATGGTCGGAATaGGTGCTAAGGGCTCGGAAT +
Preference number: 4 (lower is better)
Translates to: WKKEESFLPQTFLDSVGYILWSE*VLRARN
Trigger: ATTCCGAGCCCTTAGCACCCATTCCGACCATAGTAT...ATACCCTACGCTGTCCAGAAAGGTTTGGGGCAGAAAGGACTCCTCCTTTTTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR CCA 90 bp GGGAAGGAAAAGAGTCTAAGGAATCCCAGCAGGCAAATTCCAAAATGGGAGATTGGGAAAAGGGCACTTTaGGCCTGGCCAGACGTTATC +
Preference number: 4 (lower is better)
Translates to: GKEKSLRNPSRQIPKWEIGKRAL*AWPDVI
Trigger: GATAACGTCTGGCCAGGCCCAAAGTGCCCTTTTCCC...AATCTCCCATTTTGGAATTTGCCTGCTGGGATTCCTTAGACTCTTTTCCTTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR CCA 90 bp AGGAACAGACCTCACCTGTCAGGTCTGTTTAGGGCATGGAAAAAGGAGGAGTCCGCATGCCACGTGGCTTaGAATAAGTCTGCTAATGAA +
Preference number: 4 (lower is better)
Translates to: RNRPHLSGLFRAWKKEESACHVA*NKSANE
Trigger: TTCATTAGCAGACTTATTCCAAGCCACGTGGCATGC...GGACTCCTCCTTTTTCCATGCCCTAAACAGACCTGACAGGTGAGGTCTGTTCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR CCA 90 bp GAGCAAATCCTGCTGTCTACCCAGGCCTGGAAGTCTCAGCAACCTAAACAGCAACTACCTGTAACACAGTaGCCACATGGTTTCTTTGAG +
Preference number: 4 (lower is better)
Translates to: EQILLSTQAWKSQQPKQQLPVTQ*PHGFFE
Trigger: CTCAAAGAAACCATGTGGCCACTGTGTTACAGGTAG...TTGCTGTTTAGGTTGCTGAGACTTCCAGGCCTGGGTAGACAGCAGGATTTGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR CCA 90 bp TGTTTTTCCACCTCTGCTCTGACCTATCGAGAACTGAGAGCGACAGCAGACCAGCTACCTGTAACACAGTaGCCACATGGTTTCTTTGAG +
Preference number: 4 (lower is better)
Translates to: CFSTSALTYRELRATADQLPVTQ*PHGFFE
Trigger: CTCAAAGAAACCATGTGGCCACTGTGTTACAGGTAG...CTGGTCTGCTGTCGCTCTCAGTTCTCGATAGGTCAGAGCAGAGGTGGAAAAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR CCA 90 bp TTCTCACCCTTTGATATGATTATACTATGGTCGGAATGGGTGCTAAGGGCTCGGTCAGCTGATACTTGCTaGGTGACTACTGCGTGCCTG +
Preference number: 4 (lower is better)
Translates to: FSPFDMIILWSEWVLRARSADTC*VTTACL
Trigger: CAGGCACGCAGTAGTCACCCAGCAAGTATCAGCTGA...CCGAGCCCTTAGCACCCATTCCGACCATAGTATAATCATATCAAAGGGTGAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR CCA 90 bp CAATGTGTGGGGCCTACACTTTGCAATCTACCTGAGACGGAAAACACCAATCGCCCCTTCTCGATGCATTaGTGTCTCTGCAAGGAAATC +
Preference number: 4 (lower is better)
Translates to: QCVGPTLCNLPETENTNRPFSMH*CLCKEI
Trigger: GATTTCCTTGCAGAGACACCAATGCATCGAGAAGGG...GCGATTGGTGTTTTCCGTCTCAGGTAGATTGCAAAGTGTAGGCCCCACACATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR TCA 90 bp CATTGTGACACACCTCACTTGCAGATAACCCTGTACAGTAATGTAGTTCCACAGGTGGGACCAGGACTGTaGTGGTGGTGTAACTTTCCT +
Preference number: 4 (lower is better)
Translates to: HCDTPHLQITLYSNVVPQVGPGL*WWCNFP
Trigger: AGGAAAGTTACACCACCATCACAGTCCTGGTCCCAC...CTGTGGAACTACATTACTGTACAGGGTTATCTGCAAGTGAGGTGTGTCACAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR TCA 90 bp TTTGCAATCTACCTGAGACGGAAAACACCAATCGCAACACATGAACCTGAGACAGTGGGACCAGGACTGTaGTGGTGGTGTAACTTTCCT +
Preference number: 4 (lower is better)
Translates to: FAIYLRRKTPIATHEPETVGPGL*WWCNFP
Trigger: AGGAAAGTTACACCACCATCACAGTCCTGGTCCCAC...TGTCTCAGGTTCATGTGTTGCGATTGGTGTTTTCCGTCTCAGGTAGATTGCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000542447.6
CDS-3UTR TCA 90 bp CATTGTGACACACCTCACTTGCAGATAACCCTGTACAGTAATGTAGTTCCACAGCACAGTGTACATGTCTaGCCACTCTTCCACCTCCGA +
Preference number: 4 (lower is better)
Translates to: HCDTPHLQITLYSNVVPQHSVHV*PLFHLR
Trigger: TCGGAGGTGGAAGAGTGGTCAGACATGTACACTGTG...CTGTGGAACTACATTACTGTACAGGGTTATCTGCAAGTGAGGTGTGTCACAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR TCA 90 bp TGGTCGGAATGGGTGCTAAGGGCTCGGAATAGAGCTGCAGATTATAAAATTCATCACAGTGTACATGTCTaGCCACTCTTCCACCTCCGA +
Preference number: 4 (lower is better)
Translates to: WSEWVLRARNRAADYKIHHSVHV*PLFHLR
Trigger: TCGGAGGTGGAAGAGTGGTCAGACATGTACACTGTG...ATGAATTTTATAATCTGCAGCTCTATTCCGAGCCCTTAGCACCCATTCCGACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR TCA 90 bp AAAGAGTCTAAGGAATCCCAGCAGGCAAATTCCAAAATGGGAGATTTTGGAAAATCTGCAGGTTTCCAGTaGCCGCAGGGTGCTCCACCT +
Preference number: 4 (lower is better)
Translates to: KESKESQQANSKMGDFGKSAGFQ*PQGAPP
Trigger: AGGTGGAGCACCCTGCGGTCACTGGAAACCTGCAGA...TTTTCCAAAATCTCCCATTTTGGAATTTGCCTGCTGGGATTCCTTAGACTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR TCA 90 bp TCCTCTACCTTTTCCCGAGGCTCCCCATCTAAGATATGTTCAAGGTCACTGATTGACAGTACGGCGTGTTaGGGCATTTCATCATCGACT +
Preference number: 4 (lower is better)
Translates to: SSTFSRGSPSKICSRSLIDSTAC*GISSST
Trigger: AGTCGATGATGAAATGCCTCAACACGCCGTACTGTC...AATCAGTGACCTTGAACATATCTTAGATGGGGAGCCTCGGGAAAAGGTAGAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR TCA 90 bp TGGAAAAAGGAGGAGTCCTTTCTGCCCCAAACCTTTCTGGACAGCGTAGGGTATGTAGGGTATCTATACTaGGCCGTCTACAGATACAGA +
Preference number: 4 (lower is better)
Translates to: WKKEESFLPQTFLDSVGYVGYLY*AVYRYR
Trigger: TCTGTATCTGTAGACGGCTCAGTATAGATACCCTAC...ATACCCTACGCTGTCCAGAAAGGTTTGGGGCAGAAAGGACTCCTCCTTTTTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR TCA 90 bp CTGGGGTCCCAGCTCTTTGTGAAGCTGTCTAGGGACTCACCAGCCTTCACTGATCACGTCTTCTTTTTATaGAAGGAGAGAGAACTTTCA +
Preference number: 4 (lower is better)
Translates to: LGSQLFVKLSRDSPAFTDHVFFL*KERELS
Trigger: TGAAAGTTCTCTCTCCTTTCATAAAAAGAAGACGTG...ATCAGTGAAGGCTGGTGAGTCCCTAGACAGCTTCACAAAGAGCTGGGACCCCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR TCA 90 bp TTTGCAATCTACCTGAGACGGAAAACACCAATCGCAACACATGAACCTGAGACAGCAAGGCAAGGACGATaGCAACAGAGCAAATCCTGC +
Preference number: 4 (lower is better)
Translates to: FAIYLRRKTPIATHEPETARQGR*QQSKSC
Trigger: GCAGGATTTGCTCTGTTGTCATCGTCCTTGCCTTGC...TGTCTCAGGTTCATGTGTTGCGATTGGTGTTTTCCGTCTCAGGTAGATTGCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR TCA 90 bp AATTTGTCCACTTATATAAAAGGAACAGACCTCACCTGTCAGGTCTGTTTAGGGGCTGGGAGAGGTCACTaGAGTATCGAGTCCTCTGCC +
Preference number: 4 (lower is better)
Translates to: NLSTYIKGTDLTCQVCLGAGRGH*SIESSA
Trigger: GGCAGAGGACTCGATACTTCAGTGACCTCTCCCAGC...CCCTAAACAGACCTGACAGGTGAGGTCTGTTCCTTTTATATAAGTGGACAAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR TCA 90 bp AGGAACAGACCTCACCTGTCAGGTCTGTTTAGGGCATGGAAAAAGGAGGAGTCCGACTGCATATCTCACTaGTCTTTCCTAACAACCTTC +
Preference number: 4 (lower is better)
Translates to: RNRPHLSGLFRAWKKEESDCISH*SFLTTF
Trigger: GAAGGTTGTTAGGAAAGATCAGTGAGATATGCAGTC...GGACTCCTCCTTTTTCCATGCCCTAAACAGACCTGACAGGTGAGGTCTGTTCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR TCA 90 bp AACCTTTCTGGACAGCGTAGGGTATCTATACTGAGCCGTCTACAGATACAGAATTGGCACCTTTTTGGCTaGGCGCTGACTGCATATCTC +
Preference number: 4 (lower is better)
Translates to: NLSGQRRVSILSRLQIQNWHLFG*ALTAYL
Trigger: GAGATATGCAGTCAGCGCTCAGCCAAAAAGGTGCCA...ATTCTGTATCTGTAGACGGCTCAGTATAGATACCCTACGCTGTCCAGAAAGGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR TCA 90 bp GAAGGAAAAGAGTCTAAGGAATCCCAGCAGGCAAATTCCAAAATGGGAGATTTTCCTCAGAGCTCCCTCTaGGTAGTGACCGCTTCTTCG +
Preference number: 4 (lower is better)
Translates to: EGKESKESQQANSKMGDFPQSSL*VVTASS
Trigger: CGAAGAAGCGGTCACTACTCAGAGGGAGCTCTGAGG...AAAATCTCCCATTTTGGAATTTGCCTGCTGGGATTCCTTAGACTCTTTTCCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR TCA 90 bp GTCCTTGAGAATGATAGGGCCAATCGCTCTAAACTCAGGACTGGCTGGCTTGTCGTAGACAGAGGACAGTaGAAGATTGCACCAATTAAC +
Preference number: 4 (lower is better)
Translates to: VLENDRANRSKLRTGWLVVDRGQ*KIAPIN
Trigger: GTTAATTGGTGCAATCTTTCACTGTCCTCTGTCTAC...GACAAGCCAGCCAGTCCTGAGTTTAGAGCGATTGGCCCTATCATTCTCAAGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR TCA 90 bp GAGCAAATCCTGCTGTCTACCCAGGCCTGGAAGTCTCAGCAACCTAAACAGCAACAAAATGATATTCCCTaGTACTATTCCAGTGGGTCC +
Preference number: 4 (lower is better)
Translates to: EQILLSTQAWKSQQPKQQQNDIP*YYSSGS
Trigger: GGACCCACTGGAATAGTATCAGGGAATATCATTTTG...TTGCTGTTTAGGTTGCTGAGACTTCCAGGCCTGGGTAGACAGCAGGATTTGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR TCA 90 bp TTTGCATACCCTGTGGAGCTCAAAAGGCAAATGTACAGCAGTCACCACCTCCTGCTAGCTAACAGAGACTaGTTAGTGCAGAAGATTCCC +
Preference number: 4 (lower is better)
Translates to: FAYPVELKRQMYSSHHLLLANRD*LVQKIP
Trigger: GGGAATCTTCTGCACTAATCAGTCTCTGTTAGCTAG...CAGGAGGTGGTGACTGCTGTACATTTGCCTTTTGAGCTCCACAGGGTATGCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR GCA 90 bp AAGAGTCTAAGGAATCCCAGCAGGCAAATTCCAAAATGGGAGATTTTGGAAAAACCAGTGACCGCAGGGTaGTCCACCTGGCAGATCACT +
Preference number: 4 (lower is better)
Translates to: KSLRNPSRQIPKWEILEKPVTAG*STWQIT
Trigger: AGTGATCTGCCAGGTGGAGCACCCTGCGGTCACTGG...TTTTTCCAAAATCTCCCATTTTGGAATTTGCCTGCTGGGATTCCTTAGACTCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR GCA 90 bp CAAGTTCCAATATCACTGTCTCTTTATCATCTAAATAGGGCCAGTTGGACACCTTGTGTCTGCGTCTGCTaGGTCATCGGCTCCTTTGGC +
Preference number: 4 (lower is better)
Translates to: QVPISLSLYHLNRASWTPCVCVC*VIGSFG
Trigger: GCCAAAGGAGCCGATGACGCAGCAGACGCAGACACA...AGGTGTCCAACTGGCCCTATTTAGATGATAAAGAGACAGTGATATTGGAACTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR GCA 90 bp CATTGTGACACACCTCACTTGCAGATAACCCTGTACAGTAATGTAGTTCCACAGGATTATAGCTGTGTCTaGGTCTGCTGCGTCATCGGC +
Preference number: 4 (lower is better)
Translates to: HCDTPHLQITLYSNVVPQDYSCV*VCCVIG
Trigger: GCCGATGACGCAGCAGACGCAGACACAGCTATAATC...CTGTGGAACTACATTACTGTACAGGGTTATCTGCAAGTGAGGTGTGTCACAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR GCA 90 bp AGTGTGAGAACAATACCAGCCCTTCTTTTGTACCTCCTGCCTTTGTCAAGCCAAAGGAGGAGTCCTTTCTaGCCCAAACCTTTCTGGACA +
Preference number: 4 (lower is better)
Translates to: SVRTIPALLLYLLPLSSQRRSPF*PKPFWT
Trigger: TGTCCAGAAAGGTTTGGGGCAGAAAGGACTCCTCCT...TTGGCTTGACAAAGGCAGGAGGTACAAAAGAAGGGCTGGTATTGTTCTCACACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR GCA 90 bp TTCTCACCCTTTGATATGATTATACTATGGTCGGAATGGGTGCTAAGGGCTCGGAGGAGGAGTCCTTTCTaGCCCAAACCTTTCTGGACA +
Preference number: 4 (lower is better)
Translates to: FSPFDMIILWSEWVLRARRRSPF*PKPFWT
Trigger: TGTCCAGAAAGGTTTGGGGCAGAAAGGACTCCTCCT...CCGAGCCCTTAGCACCCATTCCGACCATAGTATAATCATATCAAAGGGTGAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR GCA 90 bp CAATGTGTGGGGCCTACACTTTGCAATCTACCTGAGACGGAAAACACCAATCGCGTAATATACAGTACATaGAGGCCACATCCTACTGCC +
Preference number: 4 (lower is better)
Translates to: QCVGPTLCNLPETENTNRVIYST*RPHPTA
Trigger: GGCAGTAGGATGTGGCCTGCATGTACTGTATATTAC...GCGATTGGTGTTTTCCGTCTCAGGTAGATTGCAAAGTGTAGGCCCCACACATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000542447.6
CDS-3UTR GCA 90 bp ATGGAAAAAGGAGGAGTCCTTTCTGCCCCAAACCTTTCTGGACAGCGTAGGGTACTGTTTTTCCACCTCTaGTCTGACCTATCGAGAACT +
Preference number: 4 (lower is better)
Translates to: MEKGGVLSAPNLSGQRRVLFFHL*SDLSRT
Trigger: AGTTCTCGATAGGTCAGAGCAGAGGTGGAAAAACAG...TACCCTACGCTGTCCAGAAAGGTTTGGGGCAGAAAGGACTCCTCCTTTTTCCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR GCA 90 bp TCCTCTACCTTTTCCCGAGGCTCCCCATCTAAGATATGTTCAAGGTCACTGATTGTGGGGCCTACACTTTaGAATCTACCTGAGACGGAA +
Preference number: 4 (lower is better)
Translates to: SSTFSRGSPSKICSRSLIVGPTL*NLPETE
Trigger: TTCCGTCTCAGGTAGATTGCAAAGTGTAGGCCCCAC...AATCAGTGACCTTGAACATATCTTAGATGGGGAGCCTCGGGAAAAGGTAGAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000542447.6
CDS-3UTR GCA 90 bp AACCTTTCTGGACAGCGTAGGGTATCTATACTGAGCCGTCTACAGATACAGAATCAACAGAGCAAATCCTaGTGTCTACCCAGGCCTGGA +
Preference number: 4 (lower is better)
Translates to: NLSGQRRVSILSRLQIQNQQSKS*CLPRPG
Trigger: TCCAGGCCTGGGTAGACAGCAGGATTTGCTCTGTTG...ATTCTGTATCTGTAGACGGCTCAGTATAGATACCCTACGCTGTCCAGAAAGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR GCA 90 bp ACTGAAGTATCGAGTCCTCTGCCCGGACTTTTCAGTACAGCCACAAGACCCATCGTTTTAGTCACCATTTaGCTCTATCCTGTGACTGAC +
Preference number: 4 (lower is better)
Translates to: TEVSSPLPGLFSTATRPIVLVTI*LYPVTD
Trigger: GTCAGTCACAGGATAGAGGCAAATGGTGACTAAAAC...GATGGGTCTTGTGGCTGTACTGAAAAGTCCGGGCAGAGGACTCGATACTTCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR GCA 90 bp GTCCTTGAGAATGATAGGGCCAATCGCTCTAAACTCAGGACTGGCTGGCTTGTCACTAAACATACTGCATaGCACGTGGCTTGGAATAAG +
Preference number: 4 (lower is better)
Translates to: VLENDRANRSKLRTGWLVTKHTA*HVAWNK
Trigger: CTTATTCCAAGCCACGTGGCATGCAGTATGTTTAGT...GACAAGCCAGCCAGTCCTGAGTTTAGAGCGATTGGCCCTATCATTCTCAAGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR GCA 90 bp AAAGAGTCTAAGGAATCCCAGCAGGCAAATTCCAAAATGGGAGATTTTGGAAAAGCTGGAGCCTCATGCTaGAGACAAGAGGGAGAGGGG +
Preference number: 4 (lower is better)
Translates to: KESKESQQANSKMGDFGKAGASC*RQEGEG
Trigger: CCCCTCTCCCTCTTGTCTGCAGCATGAGGCTCCAGC...TTTTCCAAAATCTCCCATTTTGGAATTTGCCTGCTGGGATTCCTTAGACTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR GCA 90 bp AAGAGTCTAAGGAATCCCAGCAGGCAAATTCCAAAATGGGAGATTTTGGAAAAAGCTGGAGCCTCATGCTaGAGACAAGAGGGAGAGGGG +
Preference number: 4 (lower is better)
Translates to: KSLRNPSRQIPKWEILEKAGASC*RQEGEG
Trigger: CCCCTCTCCCTCTTGTCTGCAGCATGAGGCTCCAGC...TTTTTCCAAAATCTCCCATTTTGGAATTTGCCTGCTGGGATTCCTTAGACTCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR GCA 90 bp CCCTTTGATATGATTATACTATGGTCGGAATGGGTGCTAAGGGCTCGGAATAGAAAAGCTGGAGCCTCATaGTGCAGACAAGAGGGAGAG +
Preference number: 4 (lower is better)
Translates to: PFDMIILWSEWVLRARNRKAGAS*CRQEGE
Trigger: CTCTCCCTCTTGTCTGCAGCATGAGGCTCCAGCTTT...TCTATTCCGAGCCCTTAGCACCCATTCCGACCATAGTATAATCATATCAAAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR GCA 90 bp CATTGTGACACACCTCACTTGCAGATAACCCTGTACAGTAATGTAGTTCCACAGGCTCAGTCAGCCAGGTaGTCGACTCTTCTCCCTTTA +
Preference number: 4 (lower is better)
Translates to: HCDTPHLQITLYSNVVPQAQSAR*STLLPL
Trigger: TAAAGGGAGAAGAGTCGAGCACCTGGCTGACTGAGC...CTGTGGAACTACATTACTGTACAGGGTTATCTGCAAGTGAGGTGTGTCACAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR GCA 90 bp AGTGTGAGAACAATACCAGCCCTTCTTTTGTACCTCCTGCCTTTGTCAAGCCAAGAGAACCGGTTGATTTaGCCCTCAGTAGTGGTTCTC +
Preference number: 4 (lower is better)
Translates to: SVRTIPALLLYLLPLSSQENRLI*PSVVVL
Trigger: GAGAACCACTACTGAGGGGCAAATCAACCGGTTCTC...TTGGCTTGACAAAGGCAGGAGGTACAAAAGAAGGGCTGGTATTGTTCTCACACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR GCA 90 bp GAAGGAAAAGAGTCTAAGGAATCCCAGCAGGCAAATTCCAAAATGGGAGATTTTATGACTGTGAGCCTGTaGACGTCTGGAGGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: EGKESKESQQANSKMGDFMTVSL*TSGGQL
Trigger: CAGCTGCCCTCCAGACGTGCACAGGCTCACAGTCAT...AAAATCTCCCATTTTGGAATTTGCCTGCTGGGATTCCTTAGACTCTTTTCCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR GCA 90 bp GAGCAAATCCTGCTGTCTACCCAGGCCTGGAAGTCTCAGCAACCTAAACAGCAATTGCTATTAAAGGCCTaGATTAGGCTCTTCCAACAC +
Preference number: 4 (lower is better)
Translates to: EQILLSTQAWKSQQPKQQLLLKA*IRLFQH
Trigger: GTGTTGGAAGAGCCTAATGCAGGCCTTTAATAGCAA...TTGCTGTTTAGGTTGCTGAGACTTCCAGGCCTGGGTAGACAGCAGGATTTGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR GCA 90 bp ATGGAAAAAGGAGGAGTCCTTTCTGCCCCAAACCTTTCTGGACAGCGTAGGGTACTTTTTAATCAGGTCTaGTGTGTCTGGGCAAACAGC +
Preference number: 4 (lower is better)
Translates to: MEKGGVLSAPNLSGQRRVLFNQV*CVWANS
Trigger: GCTGTTTGCCCAGACACAGCAGACCTGATTAAAAAG...TACCCTACGCTGTCCAGAAAGGTTTGGGGCAGAAAGGACTCCTCCTTTTTCCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR CCA 90 bp GACTCCTCTACCTTTTCCCGAGGCTCCCCATCTAAGATATGTTCAAGGTCACTGTCACTCTTATTGACTTaGCAACTGATGGTCGCAACC +
Preference number: 4 (lower is better)
Translates to: DSSTFSRGSPSKICSRSLSLLLT*QLMVAT
Trigger: GGTTGCGACCATCAGTTGCCAAGTCAATAAGAGTGA...CAGTGACCTTGAACATATCTTAGATGGGGAGCCTCGGGAAAAGGTAGAGGAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR CCA 90 bp TGGAAAAAGGAGGAGTCCTTTCTGCCCCAAACCTTTCTGGACAGCGTAGGGTATTCACTCTTATTGACTTaGCAACTGATGGTCGCAACC +
Preference number: 4 (lower is better)
Translates to: WKKEESFLPQTFLDSVGYSLLLT*QLMVAT
Trigger: GGTTGCGACCATCAGTTGCCAAGTCAATAAGAGTGA...ATACCCTACGCTGTCCAGAAAGGTTTGGGGCAGAAAGGACTCCTCCTTTTTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR CCA 90 bp ACTGAAGTATCGAGTCCTCTGCCCGGACTTTTCAGTACAGCCACAAGACCCATCAAATGGTCTGCCTGTTaGGATTCAGTAGCTGAATCA +
Preference number: 4 (lower is better)
Translates to: TEVSSPLPGLFSTATRPIKWSAC*DSVAES
Trigger: TGATTCAGCTACTGAATCCCAACAGGCAGACCATTT...GATGGGTCTTGTGGCTGTACTGAAAAGTCCGGGCAGAGGACTCGATACTTCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR CCA 90 bp TCCTCTACCTTTTCCCGAGGCTCCCCATCTAAGATATGTTCAAGGTCACTGATTGGTGTAACTTTCCTGTaGGGGATCGGTATAGAGCTG +
Preference number: 4 (lower is better)
Translates to: SSTFSRGSPSKICSRSLIGVTFL*GIGIEL
Trigger: CAGCTCTATACCGATCCCCCACAGGAAAGTTACACC...AATCAGTGACCTTGAACATATCTTAGATGGGGAGCCTCGGGAAAAGGTAGAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR CCA 90 bp TGTGATGGTGGTGTAACTTTCCTGTGGGGGATCGGTATAGAGCTGGCAAAAGTAGATCATCAGATTACGTaGTGGGACCAGGACTGTGAT +
Preference number: 4 (lower is better)
Translates to: CDGGVTFLWGIGIELAKVDHQIT*WDQDCD
Trigger: ATCACAGTCCTGGTCCCACCACGTAATCTGATGATC...TACTTTTGCCAGCTCTATACCGATCCCCCACAGGAAAGTTACACCACCATCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540951.1
CDS-3UTR CCA 90 bp GAAGGAAAAGAGTCTAAGGAATCCCAGCAGGCAAATTCCAAAATGGGAGATTTTCACCTGGCAGATCACTaGGACCCCATCGTCCTCCTT +
Preference number: 4 (lower is better)
Translates to: EGKESKESQQANSKMGDFHLADH*DPIVLL
Trigger: AAGGAGGACGATGGGGTCCCAGTGATCTGCCAGGTG...AAAATCTCCCATTTTGGAATTTGCCTGCTGGGATTCCTTAGACTCTTTTCCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR CCA 90 bp AGTGTGAGAACAATACCAGCCCTTCTTTTGTACCTCCTGCCTTTGTCAAGCCAAGCTGGGGCTTCCCGATaGCTTCACATGTTAACTCAA +
Preference number: 4 (lower is better)
Translates to: SVRTIPALLLYLLPLSSQAGASR*LHMLTQ
Trigger: TTGAGTTAACATGTGAAGCCATCGGGAAGCCCCAGC...TTGGCTTGACAAAGGCAGGAGGTACAAAAGAAGGGCTGGTATTGTTCTCACACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR CCA 90 bp TGGAAAAAGGAGGAGTCCTTTCTGCCCCAAACCTTTCTGGACAGCGTAGGGTATGGTCTGTTTAGGGCATaGAAAAAGGAGGAGTCCTTT +
Preference number: 4 (lower is better)
Translates to: WKKEESFLPQTFLDSVGYGLFRA*KKEESF
Trigger: AAAGGACTCCTCCTTTTTCCATGCCCTAAACAGACC...ATACCCTACGCTGTCCAGAAAGGTTTGGGGCAGAAAGGACTCCTCCTTTTTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR CCA 90 bp CAATGTGTGGGGCCTACACTTTGCAATCTACCTGAGACGGAAAACACCAATCGCCTACTTCCCCTCCTGTaGCAACTCAAAATTTGTCCA +
Preference number: 4 (lower is better)
Translates to: QCVGPTLCNLPETENTNRLLPLL*QLKICP
Trigger: TGGACAAATTTTGAGTTGCCACAGGAGGGGAAGTAG...GCGATTGGTGTTTTCCGTCTCAGGTAGATTGCAAAGTGTAGGCCCCACACATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000542447.6
CDS-3UTR CCA 90 bp ATGGAAAAAGGAGGAGTCCTTTCTGCCCCAAACCTTTCTGGACAGCGTAGGGTACTACTTCCCCTCCTGTaGCAACTCAAAATTTGTCCA +
Preference number: 4 (lower is better)
Translates to: MEKGGVLSAPNLSGQRRVLLPLL*QLKICP
Trigger: TGGACAAATTTTGAGTTGCCACAGGAGGGGAAGTAG...TACCCTACGCTGTCCAGAAAGGTTTGGGGCAGAAAGGACTCCTCCTTTTTCCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR CCA 90 bp TGGAAAAAGGAGGAGTCCTTTCTGCCCCAAACCTTTCTGGACAGCGTAGGGTATGCCGATTGGGAAAGGTaGATGGAATCATTTGGAACA +
Preference number: 4 (lower is better)
Translates to: WKKEESFLPQTFLDSVGYADWER*MESFGT
Trigger: TGTTCCAAATGATTCCATCCACCTTTCCCAATCGGC...ATACCCTACGCTGTCCAGAAAGGTTTGGGGCAGAAAGGACTCCTCCTTTTTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR CCA 90 bp TGGAAAAAGGAGGAGTCCTTTCTGCCCCAAACCTTTCTGGACAGCGTAGGGTATAGAAGTAAGGCCGATTaGGAAAGGTGGATGGAATCA +
Preference number: 4 (lower is better)
Translates to: WKKEESFLPQTFLDSVGYRSKAD*ERWMES
Trigger: TGATTCCATCCACCTTTCCCAATCGGCCTTACTTCT...ATACCCTACGCTGTCCAGAAAGGTTTGGGGCAGAAAGGACTCCTCCTTTTTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR CCA 90 bp CAATGTGTGGGGCCTACACTTTGCAATCTACCTGAGACGGAAAACACCAATCGCATAGGGACTGTTAGCTaGAGTCTGGAGTCTTACCAA +
Preference number: 4 (lower is better)
Translates to: QCVGPTLCNLPETENTNRIGTVS*SLESYQ
Trigger: TTGGTAAGACTCCAGACTCCAGCTAACAGTCCCTAT...GCGATTGGTGTTTTCCGTCTCAGGTAGATTGCAAAGTGTAGGCCCCACACATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000542447.6
CDS-3UTR CCA 90 bp TTTGCATACCCTGTGGAGCTCAAAAGGCAAATGTACAGCAGTCACCACCTCCTGGCATGCCACGTGGCTTaGAATAAGTCTGCTAATGAA +
Preference number: 4 (lower is better)
Translates to: FAYPVELKRQMYSSHHLLACHVA*NKSANE
Trigger: TTCATTAGCAGACTTATTCCAAGCCACGTGGCATGC...CAGGAGGTGGTGACTGCTGTACATTTGCCTTTTGAGCTCCACAGGGTATGCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR CCA 90 bp ACTCTCTGGGGGAAACGAGGGCCATTTTCACTCTCGTACGCACTCTTCTCAAATATACTGCATGCCACGTaGCTTGGAATAAGTCTGCTA +
Preference number: 4 (lower is better)
Translates to: TLWGKRGPFSLSYALFSNILHAT*LGISLL
Trigger: TAGCAGACTTATTCCAAGCCACGTGGCATGCAGTAT...ATTTGAGAAGAGTGCGTACGAGAGTGAAAATGGCCCTCGTTTCCCCCAGAGAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR CCA 90 bp GACTCCTCTACCTTTTCCCGAGGCTCCCCATCTAAGATATGTTCAAGGTCACTGTTTGTGAAAACTCTCTaGGGGAAACGAGGGCCATTT +
Preference number: 4 (lower is better)
Translates to: DSSTFSRGSPSKICSRSLFVKTL*GKRGPF
Trigger: AAATGGCCCTCGTTTCCCCCAGAGAGTTTTCACAAA...CAGTGACCTTGAACATATCTTAGATGGGGAGCCTCGGGAAAAGGTAGAGGAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR CCA 90 bp CCCTTTGATATGATTATACTATGGTCGGAATGGGTGCTAAGGGCTCGGAATAGATCAGCTGATACTTGCTaGGTGACTACTGCGTGCCTG +
Preference number: 4 (lower is better)
Translates to: PFDMIILWSEWVLRARNRSADTC*VTTACL
Trigger: CAGGCACGCAGTAGTCACCCAGCAAGTATCAGCTGA...TCTATTCCGAGCCCTTAGCACCCATTCCGACCATAGTATAATCATATCAAAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR CCA 90 bp TCTCATTGTGACACACCTCACTTGCAGATAACCCTGTACAGTAATGTAGTTCCAAAACTCAGGACTGGCTaGCTTGTCCCTTCACGGCCA +
Preference number: 4 (lower is better)
Translates to: SHCDTPHLQITLYSNVVPKLRTG*LVPSRP
Trigger: TGGCCGTGAAGGGACAAGCCAGCCAGTCCTGAGTTT...TGGAACTACATTACTGTACAGGGTTATCTGCAAGTGAGGTGTGTCACAATGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR TCA 90 bp TTCTCACCCTTTGATATGATTATACTATGGTCGGAATGGGTGCTAAGGGCTCGGTTGGGATTCAGTAGCTaGATCACAGAGTCGTCACTC +
Preference number: 4 (lower is better)
Translates to: FSPFDMIILWSEWVLRARLGFSS*ITESSL
Trigger: GAGTGACGACTCTGTGATTCAGCTACTGAATCCCAA...CCGAGCCCTTAGCACCCATTCCGACCATAGTATAATCATATCAAAGGGTGAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR TCA 90 bp TCTCATTGTGACACACCTCACTTGCAGATAACCCTGTACAGTAATGTAGTTCCAGTGGGACCAGGACTGTaGTGGTGGTGTAACTTTCCT +
Preference number: 4 (lower is better)
Translates to: SHCDTPHLQITLYSNVVPVGPGL*WWCNFP
Trigger: AGGAAAGTTACACCACCATCACAGTCCTGGTCCCAC...TGGAACTACATTACTGTACAGGGTTATCTGCAAGTGAGGTGTGTCACAATGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR TCA 90 bp TCTCATTGTGACACACCTCACTTGCAGATAACCCTGTACAGTAATGTAGTTCCACACAGTGTACATGTCTaGCCACTCTTCCACCTCCGA +
Preference number: 4 (lower is better)
Translates to: SHCDTPHLQITLYSNVVPHSVHV*PLFHLR
Trigger: TCGGAGGTGGAAGAGTGGTCAGACATGTACACTGTG...TGGAACTACATTACTGTACAGGGTTATCTGCAAGTGAGGTGTGTCACAATGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR TCA 90 bp CCCTTTGATATGATTATACTATGGTCGGAATGGGTGCTAAGGGCTCGGAATAGAACCTTCAGCATCAGCTaGCTGGTCACAGTGTACATG +
Preference number: 4 (lower is better)
Translates to: PFDMIILWSEWVLRARNRTFSIS*LVTVYM
Trigger: CATGTACACTGTGACCAGTCAGCTGATGCTGAAGGT...TCTATTCCGAGCCCTTAGCACCCATTCCGACCATAGTATAATCATATCAAAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR TCA 90 bp TGGTCGGAATGGGTGCTAAGGGCTCGGAATAGAGCTGCAGATTATAAAATTCATACCTTCAGCATCAGCTaGCTGGTCACAGTGTACATG +
Preference number: 4 (lower is better)
Translates to: WSEWVLRARNRAADYKIHTFSIS*LVTVYM
Trigger: CATGTACACTGTGACCAGTCAGCTGATGCTGAAGGT...ATGAATTTTATAATCTGCAGCTCTATTCCGAGCCCTTAGCACCCATTCCGACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR TCA 90 bp CATTGTGACACACCTCACTTGCAGATAACCCTGTACAGTAATGTAGTTCCACAGGACAGTACGGCGTGTTaGGGCATTTCATCATCGACT +
Preference number: 4 (lower is better)
Translates to: HCDTPHLQITLYSNVVPQDSTAC*GISSST
Trigger: AGTCGATGATGAAATGCCTCAACACGCCGTACTGTC...CTGTGGAACTACATTACTGTACAGGGTTATCTGCAAGTGAGGTGTGTCACAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR TCA 90 bp GAAGGAAAAGAGTCTAAGGAATCCCAGCAGGCAAATTCCAAAATGGGAGATTTTCATGATCCACTGCCCTaGTCGAGCCTTCTTCACCTG +
Preference number: 4 (lower is better)
Translates to: EGKESKESQQANSKMGDFHDPLP*SSLLHL
Trigger: CAGGTGAAGAAGGCTCGATCAGGGCAGTGGATCATG...AAAATCTCCCATTTTGGAATTTGCCTGCTGGGATTCCTTAGACTCTTTTCCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR TCA 90 bp AGGAACAGACCTCACCTGTCAGGTCTGTTTAGGGCATGGAAAAAGGAGGAGTCCCTTTGGCTTCATGAGTaGAGTATGTACCTTTATGTC +
Preference number: 4 (lower is better)
Translates to: RNRPHLSGLFRAWKKEESLWLHE*SMYLYV
Trigger: GACATAAAGGTACATACTTCACTCATGAAGCCAAAG...GGACTCCTCCTTTTTCCATGCCCTAAACAGACCTGACAGGTGAGGTCTGTTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR TCA 90 bp CAATGTGTGGGGCCTACACTTTGCAATCTACCTGAGACGGAAAACACCAATCGCGCTCCTTTGGCTTCATaGGTGAAGTATGTACCTTTA +
Preference number: 4 (lower is better)
Translates to: QCVGPTLCNLPETENTNRAPLAS*VKYVPL
Trigger: TAAAGGTACATACTTCACTCATGAAGCCAAAGGAGC...GCGATTGGTGTTTTCCGTCTCAGGTAGATTGCAAAGTGTAGGCCCCACACATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000542447.6
CDS-3UTR TCA 90 bp ATGGAAAAAGGAGGAGTCCTTTCTGCCCCAAACCTTTCTGGACAGCGTAGGGTAACTGCTCTAAGTATTTaGAACATGGGCAGCAGCAAA +
Preference number: 4 (lower is better)
Translates to: MEKGGVLSAPNLSGQRRVTALSI*NMGSSK
Trigger: TTTGCTGCTGCCCATGTTTCAAATACTTAGAGCAGT...TACCCTACGCTGTCCAGAAAGGTTTGGGGCAGAAAGGACTCCTCCTTTTTCCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR TCA 90 bp TGTTTTTCCACCTCTGCTCTGACCTATCGAGAACTGAGAGCGACAGCAGACCAGAATTCAATCTCATTGTaGCACACCTCACTTGCAGAT +
Preference number: 4 (lower is better)
Translates to: CFSTSALTYRELRATADQNSISL*HTSLAD
Trigger: ATCTGCAAGTGAGGTGTGTCACAATGAGATTGAATT...CTGGTCTGCTGTCGCTCTCAGTTCTCGATAGGTCAGAGCAGAGGTGGAAAAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR TCA 90 bp GGGAAGGAAAAGAGTCTAAGGAATCCCAGCAGGCAAATTCCAAAATGGGAGATTGCTGCCAGTTCTTCATaGCAAAGGGCTGCGTATTTG +
Preference number: 4 (lower is better)
Translates to: GKEKSLRNPSRQIPKWEIAASSS*QRAAYL
Trigger: CAAATACGCAGCCCTTTGTCATGAAGAACTGGCAGC...AATCTCCCATTTTGGAATTTGCCTGCTGGGATTCCTTAGACTCTTTTCCTTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR TCA 90 bp AGTGTGAGAACAATACCAGCCCTTCTTTTGTACCTCCTGCCTTTGTCAAGCCAAGCAAACATCAAGGTTTaGAATACAGCATCGGTGGCC +
Preference number: 4 (lower is better)
Translates to: SVRTIPALLLYLLPLSSQANIKV*NTASVA
Trigger: GGCCACCGATGCTGTATTTCAAACCTTGATGTTTGC...TTGGCTTGACAAAGGCAGGAGGTACAAAAGAAGGGCTGGTATTGTTCTCACACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR TCA 90 bp CAAGTTCCAATATCACTGTCTCTTTATCATCTAAATAGGGCCAGTTGGACACCTTGTATTTCCCAGCACTaGCCACCAGGGGCAGTAGAC +
Preference number: 4 (lower is better)
Translates to: QVPISLSLYHLNRASWTPCISQH*PPGAVD
Trigger: GTCTACTGCCCCTGGTGGTCAGTGCTGGGAAATACA...AGGTGTCCAACTGGCCCTATTTAGATGATAAAGAGACAGTGATATTGGAACTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR TCA 90 bp AATTTGTCCACTTATATAAAAGGAACAGACCTCACCTGTCAGGTCTGTTTAGGGTGTATTTCCCAGCACTaGCCACCAGGGGCAGTAGAC +
Preference number: 4 (lower is better)
Translates to: NLSTYIKGTDLTCQVCLGCISQH*PPGAVD
Trigger: GTCTACTGCCCCTGGTGGTCAGTGCTGGGAAATACA...CCCTAAACAGACCTGACAGGTGAGGTCTGTTCCTTTTATATAAGTGGACAAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR GCA 90 bp AGTGTGAGAACAATACCAGCCCTTCTTTTGTACCTCCTGCCTTTGTCAAGCCAATTCGTAAACAGATTCTaGCCATCACCTGTGGGGATC +
Preference number: 4 (lower is better)
Translates to: SVRTIPALLLYLLPLSSQFVNRF*PSPVGI
Trigger: GATCCCCACAGGTGATGGGCAGAATCTGTTTACGAA...TTGGCTTGACAAAGGCAGGAGGTACAAAAGAAGGGCTGGTATTGTTCTCACACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR GCA 90 bp TCCTCTACCTTTTCCCGAGGCTCCCCATCTAAGATATGTTCAAGGTCACTGATTCTTCCACCTCCGATTTaGCTTTTAGCTCTGTGTTCC +
Preference number: 4 (lower is better)
Translates to: SSTFSRGSPSKICSRSLILPPPI*LLALCS
Trigger: GGAACACAGAGCTAAAAGGCAAATCGGAGGTGGAAG...AATCAGTGACCTTGAACATATCTTAGATGGGGAGCCTCGGGAAAAGGTAGAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR GCA 90 bp CAAGTTCCAATATCACTGTCTCTTTATCATCTAAATAGGGCCAGTTGGACACCTAGATACCGCTGGGTCTaGAGGTTTCCAGTGACCGCA +
Preference number: 4 (lower is better)
Translates to: QVPISLSLYHLNRASWTPRYRWV*RFPVTA
Trigger: TGCGGTCACTGGAAACCTGCAGACCCAGCGGTATCT...AGGTGTCCAACTGGCCCTATTTAGATGATAAAGAGACAGTGATATTGGAACTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR GCA 90 bp AATTTGTCCACTTATATAAAAGGAACAGACCTCACCTGTCAGGTCTGTTTAGGGAGTAAGGCCGTGAACTaGTGGTTCTGTCGTCGCCGT +
Preference number: 4 (lower is better)
Translates to: NLSTYIKGTDLTCQVCLGSKAVN*WFCRRR
Trigger: ACGGCGACGACAGAACCAGCAGTTCACGGCCTTACT...CCCTAAACAGACCTGACAGGTGAGGTCTGTTCCTTTTATATAAGTGGACAAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000536727.5
CDS-3UTR GCA 90 bp GAAGGAAAAGAGTCTAAGGAATCCCAGCAGGCAAATTCCAAAATGGGAGATTTTCACGGCATGATCCACTaGCCTGATCGAGCCTTCTTC +
Preference number: 4 (lower is better)
Translates to: EGKESKESQQANSKMGDFHGMIH*PDRAFF
Trigger: GAAGAAGGCTCGATCAGGGCAGTGGATCATGCCGTG...AAAATCTCCCATTTTGGAATTTGCCTGCTGGGATTCCTTAGACTCTTTTCCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR GCA 90 bp TGGAAAAAGGAGGAGTCCTTTCTGCCCCAAACCTTTCTGGACAGCGTAGGGTATCTGAAAATCCGTACATaGTGTTTTTCCACCTCTGCT +
Preference number: 4 (lower is better)
Translates to: WKKEESFLPQTFLDSVGYLKIRT*CFSTSA
Trigger: AGCAGAGGTGGAAAAACAGCATGTACGGATTTTCAG...ATACCCTACGCTGTCCAGAAAGGTTTGGGGCAGAAAGGACTCCTCCTTTTTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR GCA 90 bp ATACTATGGTCGGAATGGGTGCTAAGGGCTCGGAATAGAGCTGCAGATTATAAAGCTATGCACTATGGCTaGCATCATGCGAGGATCAGT +
Preference number: 4 (lower is better)
Translates to: ILWSEWVLRARNRAADYKAMHYG*HHARIS
Trigger: ACTGATCCTCGCATGATGGCAGCCATAGTGCATAGC...TTTATAATCTGCAGCTCTATTCCGAGCCCTTAGCACCCATTCCGACCATAGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR GCA 90 bp GGGAAGGAAAAGAGTCTAAGGAATCCCAGCAGGCAAATTCCAAAATGGGAGATTGCTATGCACTATGGCTaGCATCATGCGAGGATCAGT +
Preference number: 4 (lower is better)
Translates to: GKEKSLRNPSRQIPKWEIAMHYG*HHARIS
Trigger: ACTGATCCTCGCATGATGGCAGCCATAGTGCATAGC...AATCTCCCATTTTGGAATTTGCCTGCTGGGATTCCTTAGACTCTTTTCCTTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR GCA 90 bp AGGAACAGACCTCACCTGTCAGGTCTGTTTAGGGCATGGAAAAAGGAGGAGTCCAAAAGGCCCCCATATTaGAATGGTTCTATCAAAGGT +
Preference number: 4 (lower is better)
Translates to: RNRPHLSGLFRAWKKEESKRPPY*NGSIKG
Trigger: ACCTTTGATAGAACCATTGCAATATGGGGGCCTTTT...GGACTCCTCCTTTTTCCATGCCCTAAACAGACCTGACAGGTGAGGTCTGTTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR GCA 90 bp ATACTATGGTCGGAATGGGTGCTAAGGGCTCGGAATAGAGCTGCAGATTATAAAGTGGGGCCTACACTTTaGAATCTACCTGAGACGGAA +
Preference number: 4 (lower is better)
Translates to: ILWSEWVLRARNRAADYKVGPTL*NLPETE
Trigger: TTCCGTCTCAGGTAGATTGCAAAGTGTAGGCCCCAC...TTTATAATCTGCAGCTCTATTCCGAGCCCTTAGCACCCATTCCGACCATAGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000542447.6
CDS-3UTR GCA 90 bp TGCAGGATAAACAGTATTAGAAGATGCAATCGTAACATTGCTGACTTCAGGATGTGTCCTAGCATCTACTaGCAGCGTTCCTGGCCCCGT +
Preference number: 4 (lower is better)
Translates to: CRINSIRRCNRNIADFRMCPSIY*QRSWPR
Trigger: ACGGGGCCAGGAACGCTGGCAGTAGATGCTAGGACA...CATCCTGAAGTCAGCAATGTTACGATTGCATCTTCTAATACTGTTTATCCTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR GCA 90 bp AGGAACAGACCTCACCTGTCAGGTCTGTTTAGGGCATGGAAAAAGGAGGAGTCCGATGTATTTGGAGAATaGCAGGCCAAAACATTTGTG +
Preference number: 4 (lower is better)
Translates to: RNRPHLSGLFRAWKKEESDVFGE*QAKTFV
Trigger: CACAAATGTTTTGGCCTGGCATTCTCCAAATACATC...GGACTCCTCCTTTTTCCATGCCCTAAACAGACCTGACAGGTGAGGTCTGTTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR GCA 90 bp TGGTCGGAATGGGTGCTAAGGGCTCGGAATAGAGCTGCAGATTATAAAATTCATGAGAACCGGTTGATTTaGCCCTCAGTAGTGGTTCTC +
Preference number: 4 (lower is better)
Translates to: WSEWVLRARNRAADYKIHENRLI*PSVVVL
Trigger: GAGAACCACTACTGAGGGGCAAATCAACCGGTTCTC...ATGAATTTTATAATCTGCAGCTCTATTCCGAGCCCTTAGCACCCATTCCGACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR GCA 90 bp GAAGGAAAAGAGTCTAAGGAATCCCAGCAGGCAAATTCCAAAATGGGAGATTTTCGAGCCTTCTTCACCTaGTCGGGAATCGTGAACTGC +
Preference number: 4 (lower is better)
Translates to: EGKESKESQQANSKMGDFRAFFT*SGIVNC
Trigger: GCAGTTCACGATTCCCGAGCAGGTGAAGAAGGCTCG...AAAATCTCCCATTTTGGAATTTGCCTGCTGGGATTCCTTAGACTCTTTTCCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000537058.5
CDS-3UTR CCA 90 bp TTTGCATACCCTGTGGAGCTCAAAAGGCAAATGTACAGCAGTCACCACCTCCTGAAATGGTCTGCCTGTTaGGATTCAGTAGCTGAATCA +
Preference number: 4 (lower is better)
Translates to: FAYPVELKRQMYSSHHLLKWSAC*DSVAES
Trigger: TGATTCAGCTACTGAATCCCAACAGGCAGACCATTT...CAGGAGGTGGTGACTGCTGTACATTTGCCTTTTGAGCTCCACAGGGTATGCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR CCA 90 bp TGGAAAAAGGAGGAGTCCTTTCTGCCCCAAACCTTTCTGGACAGCGTAGGGTATAAATGGTCTGCCTGTTaGGATTCAGTAGCTGAATCA +
Preference number: 4 (lower is better)
Translates to: WKKEESFLPQTFLDSVGYKWSAC*DSVAES
Trigger: TGATTCAGCTACTGAATCCCAACAGGCAGACCATTT...ATACCCTACGCTGTCCAGAAAGGTTTGGGGCAGAAAGGACTCCTCCTTTTTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR CCA 90 bp CATTGTGACACACCTCACTTGCAGATAACCCTGTACAGTAATGTAGTTCCACAGGGTGTAACTTTCCTGTaGGGGATCGGTATAGAGCTG +
Preference number: 4 (lower is better)
Translates to: HCDTPHLQITLYSNVVPQGVTFL*GIGIEL
Trigger: CAGCTCTATACCGATCCCCCACAGGAAAGTTACACC...CTGTGGAACTACATTACTGTACAGGGTTATCTGCAAGTGAGGTGTGTCACAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR CCA 90 bp AAAGAGTCTAAGGAATCCCAGCAGGCAAATTCCAAAATGGGAGATTTTGGAAAACACCTGGCAGATCACTaGGACCCCATCGTCCTCCTT +
Preference number: 4 (lower is better)
Translates to: KESKESQQANSKMGDFGKHLADH*DPIVLL
Trigger: AAGGAGGACGATGGGGTCCCAGTGATCTGCCAGGTG...TTTTCCAAAATCTCCCATTTTGGAATTTGCCTGCTGGGATTCCTTAGACTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR CCA 90 bp AACCTTTCTGGACAGCGTAGGGTATCTATACTGAGCCGTCTACAGATACAGAATACTTCTAGATACCGCTaGGTCTGCAGGTTTCCAGTG +
Preference number: 4 (lower is better)
Translates to: NLSGQRRVSILSRLQIQNTSRYR*VCRFPV
Trigger: CACTGGAAACCTGCAGACCCAGCGGTATCTAGAAGT...ATTCTGTATCTGTAGACGGCTCAGTATAGATACCCTACGCTGTCCAGAAAGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR CCA 90 bp GGGAAGGAAAAGAGTCTAAGGAATCCCAGCAGGCAAATTCCAAAATGGGAGATTGCTGGGGCTTCCCGATaGCTTCACATGTTAACTCAA +
Preference number: 4 (lower is better)
Translates to: GKEKSLRNPSRQIPKWEIAGASR*LHMLTQ
Trigger: TTGAGTTAACATGTGAAGCCATCGGGAAGCCCCAGC...AATCTCCCATTTTGGAATTTGCCTGCTGGGATTCCTTAGACTCTTTTCCTTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR CCA 90 bp CATTGTGACACACCTCACTTGCAGATAACCCTGTACAGTAATGTAGTTCCACAGGCTGGGGCTTCCCGATaGCTTCACATGTTAACTCAA +
Preference number: 4 (lower is better)
Translates to: HCDTPHLQITLYSNVVPQAGASR*LHMLTQ
Trigger: TTGAGTTAACATGTGAAGCCATCGGGAAGCCCCAGC...CTGTGGAACTACATTACTGTACAGGGTTATCTGCAAGTGAGGTGTGTCACAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR CCA 90 bp GAAGGAAAAGAGTCTAAGGAATCCCAGCAGGCAAATTCCAAAATGGGAGATTTTAAGGCCGTGAACTGCTaGTTCTGTCGTCGCCGTTGT +
Preference number: 4 (lower is better)
Translates to: EGKESKESQQANSKMGDFKAVNC*FCRRRC
Trigger: ACAACGGCGACGACAGAACCAGCAGTTCACGGCCTT...AAAATCTCCCATTTTGGAATTTGCCTGCTGGGATTCCTTAGACTCTTTTCCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000536727.5
CDS-3UTR CCA 90 bp GACTCCTCTACCTTTTCCCGAGGCTCCCCATCTAAGATATGTTCAAGGTCACTGCACACAGATTCGAGTTaGAAATCCCAGCATGACAAA +
Preference number: 4 (lower is better)
Translates to: DSSTFSRGSPSKICSRSLHTDSS*KSQHDK
Trigger: TTTGTCATGCTGGGATTTCCAACTCGAATCTGTGTG...CAGTGACCTTGAACATATCTTAGATGGGGAGCCTCGGGAAAAGGTAGAGGAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR CCA 90 bp TTCTCACCCTTTGATATGATTATACTATGGTCGGAATGGGTGCTAAGGGCTCGGATACTATGGTCGGAATaGGTGCTAAGGGCTCGGAAT +
Preference number: 4 (lower is better)
Translates to: FSPFDMIILWSEWVLRARILWSE*VLRARN
Trigger: ATTCCGAGCCCTTAGCACCCATTCCGACCATAGTAT...CCGAGCCCTTAGCACCCATTCCGACCATAGTATAATCATATCAAAGGGTGAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR CCA 90 bp GTCCTTGAGAATGATAGGGCCAATCGCTCTAAACTCAGGACTGGCTGGCTTGTCGATATGATTATACTATaGTCGGAATGGGTGCTAAGG +
Preference number: 4 (lower is better)
Translates to: VLENDRANRSKLRTGWLVDMIIL*SEWVLR
Trigger: CCTTAGCACCCATTCCGACCATAGTATAATCATATC...GACAAGCCAGCCAGTCCTGAGTTTAGAGCGATTGGCCCTATCATTCTCAAGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR CCA 90 bp GAGCAAATCCTGCTGTCTACCCAGGCCTGGAAGTCTCAGCAACCTAAACAGCAAGCGAATGGGAACATATaGATATGGAGTTTCTTACAC +
Preference number: 4 (lower is better)
Translates to: EQILLSTQAWKSQQPKQQANGNI*IWSFLH
Trigger: GTGTAAGAAACTCCATATCCATATGTTCCCATTCGC...TTGCTGTTTAGGTTGCTGAGACTTCCAGGCCTGGGTAGACAGCAGGATTTGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR CCA 90 bp AGGAACAGACCTCACCTGTCAGGTCTGTTTAGGGCATGGAAAAAGGAGGAGTCCGCGAATGGGAACATATaGATATGGAGTTTCTTACAC +
Preference number: 4 (lower is better)
Translates to: RNRPHLSGLFRAWKKEESANGNI*IWSFLH
Trigger: GTGTAAGAAACTCCATATCCATATGTTCCCATTCGC...GGACTCCTCCTTTTTCCATGCCCTAAACAGACCTGACAGGTGAGGTCTGTTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000542447.6
CDS-3UTR CCA 90 bp CAAGTTCCAATATCACTGTCTCTTTATCATCTAAATAGGGCCAGTTGGACACCTTCAGTGGGGCACCCATaGCTCAGGGTCACTTCAAGT +
Preference number: 4 (lower is better)
Translates to: QVPISLSLYHLNRASWTPSVGHP*LRVTSS
Trigger: ACTTGAAGTGACCCTGAGCCATGGGTGCCCCACTGA...AGGTGTCCAACTGGCCCTATTTAGATGATAAAGAGACAGTGATATTGGAACTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR CCA 90 bp GTCCTTGAGAATGATAGGGCCAATCGCTCTAAACTCAGGACTGGCTGGCTTGTCTCTCAAATGAAGGAGTaGGCAACTTATCAAGATCCT +
Preference number: 4 (lower is better)
Translates to: VLENDRANRSKLRTGWLVSQMKE*ATYQDP
Trigger: AGGATCTTGATAAGTTGCCCACTCCTTCATTTGAGA...GACAAGCCAGCCAGTCCTGAGTTTAGAGCGATTGGCCCTATCATTCTCAAGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR CCA 90 bp AGGAACAGACCTCACCTGTCAGGTCTGTTTAGGGCATGGAAAAAGGAGGAGTCCCTCATCACTTTATTCTaGGAGAGGAGGTTAGAGAAA +
Preference number: 4 (lower is better)
Translates to: RNRPHLSGLFRAWKKEESLITLF*ERRLEK
Trigger: TTTCTCTAACCTCCTCTCCCAGAATAAAGTGATGAG...GGACTCCTCCTTTTTCCATGCCCTAAACAGACCTGACAGGTGAGGTCTGTTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR TCA 90 bp AATTTGTCCACTTATATAAAAGGAACAGACCTCACCTGTCAGGTCTGTTTAGGGGTGGGACCAGGACTGTaGTGGTGGTGTAACTTTCCT +
Preference number: 4 (lower is better)
Translates to: NLSTYIKGTDLTCQVCLGVGPGL*WWCNFP
Trigger: AGGAAAGTTACACCACCATCACAGTCCTGGTCCCAC...CCCTAAACAGACCTGACAGGTGAGGTCTGTTCCTTTTATATAAGTGGACAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR TCA 90 bp AATTTGTCCACTTATATAAAAGGAACAGACCTCACCTGTCAGGTCTGTTTAGGGCACAGTGTACATGTCTaGCCACTCTTCCACCTCCGA +
Preference number: 4 (lower is better)
Translates to: NLSTYIKGTDLTCQVCLGHSVHV*PLFHLR
Trigger: TCGGAGGTGGAAGAGTGGTCAGACATGTACACTGTG...CCCTAAACAGACCTGACAGGTGAGGTCTGTTCCTTTTATATAAGTGGACAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR TCA 90 bp CAAGTTCCAATATCACTGTCTCTTTATCATCTAAATAGGGCCAGTTGGACACCTCACAGTGTACATGTCTaGCCACTCTTCCACCTCCGA +
Preference number: 4 (lower is better)
Translates to: QVPISLSLYHLNRASWTPHSVHV*PLFHLR
Trigger: TCGGAGGTGGAAGAGTGGTCAGACATGTACACTGTG...AGGTGTCCAACTGGCCCTATTTAGATGATAAAGAGACAGTGATATTGGAACTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR TCA 90 bp GAGTTTTCATTGTTTGTTCACCCAAATCTTTACGACAACAGAGAAGAATGCATTTCTGCAGGTTTCCAGTaGCCGCAGGGTGCTCCACCT +
Preference number: 4 (lower is better)
Translates to: EFSLFVHPNLYDNREECISAGFQ*PQGAPP
Trigger: AGGTGGAGCACCCTGCGGTCACTGGAAACCTGCAGA...AATGCATTCTTCTCTGTTGTCGTAAAGATTTGGGTGAACAAACAATGAAAACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR TCA 90 bp AAAGAGTCTAAGGAATCCCAGCAGGCAAATTCCAAAATGGGAGATTTTGGAAAACATGATCCACTGCCCTaGTCGAGCCTTCTTCACCTG +
Preference number: 4 (lower is better)
Translates to: KESKESQQANSKMGDFGKHDPLP*SSLLHL
Trigger: CAGGTGAAGAAGGCTCGATCAGGGCAGTGGATCATG...TTTTCCAAAATCTCCCATTTTGGAATTTGCCTGCTGGGATTCCTTAGACTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR TCA 90 bp GAGTTTTCATTGTTTGTTCACCCAAATCTTTACGACAACAGAGAAGAATGCATTCCACCGATCACGGCATaGTCCACTGCCCTGATCGAG +
Preference number: 4 (lower is better)
Translates to: EFSLFVHPNLYDNREECIPPITA*STALIE
Trigger: CTCGATCAGGGCAGTGGATCATGCCGTGATCGGTGG...AATGCATTCTTCTCTGTTGTCGTAAAGATTTGGGTGAACAAACAATGAAAACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR TCA 90 bp TGGAAAAAGGAGGAGTCCTTTCTGCCCCAAACCTTTCTGGACAGCGTAGGGTATAGTTGGACACCTCATTaGAACAAAAAGGCTGATCTA +
Preference number: 4 (lower is better)
Translates to: WKKEESFLPQTFLDSVGYSWTPH*NKKADL
Trigger: TAGATCAGCCTTTTTGTTTCAATGAGGTGTCCAACT...ATACCCTACGCTGTCCAGAAAGGTTTGGGGCAGAAAGGACTCCTCCTTTTTCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR TCA 90 bp TTTGCATACCCTGTGGAGCTCAAAAGGCAAATGTACAGCAGTCACCACCTCCTGAGTTGGACACCTCATTaGAACAAAAAGGCTGATCTA +
Preference number: 4 (lower is better)
Translates to: FAYPVELKRQMYSSHHLLSWTPH*NKKADL
Trigger: TAGATCAGCCTTTTTGTTTCAATGAGGTGTCCAACT...CAGGAGGTGGTGACTGCTGTACATTTGCCTTTTGAGCTCCACAGGGTATGCAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR TCA 90 bp GACTCCTCTACCTTTTCCCGAGGCTCCCCATCTAAGATATGTTCAAGGTCACTGAGTTGGACACCTCATTaGAACAAAAAGGCTGATCTA +
Preference number: 4 (lower is better)
Translates to: DSSTFSRGSPSKICSRSLSWTPH*NKKADL
Trigger: TAGATCAGCCTTTTTGTTTCAATGAGGTGTCCAACT...CAGTGACCTTGAACATATCTTAGATGGGGAGCCTCGGGAAAAGGTAGAGGAGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR TCA 90 bp ATGGAAAAAGGAGGAGTCCTTTCTGCCCCAAACCTTTCTGGACAGCGTAGGGTAAATTCAATCTCATTGTaGCACACCTCACTTGCAGAT +
Preference number: 4 (lower is better)
Translates to: MEKGGVLSAPNLSGQRRVNSISL*HTSLAD
Trigger: ATCTGCAAGTGAGGTGTGTCACAATGAGATTGAATT...TACCCTACGCTGTCCAGAAAGGTTTGGGGCAGAAAGGACTCCTCCTTTTTCCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR TCA 90 bp GACTCCTCTACCTTTTCCCGAGGCTCCCCATCTAAGATATGTTCAAGGTCACTGCCAAATCTGAAGGAATaGAAGTTTCACACAGATTCG +
Preference number: 4 (lower is better)
Translates to: DSSTFSRGSPSKICSRSLPNLKE*KFHTDS
Trigger: CGAATCTGTGTGAAACTTTCATTCCTTCAGATTTGG...CAGTGACCTTGAACATATCTTAGATGGGGAGCCTCGGGAAAAGGTAGAGGAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR TCA 90 bp TGTTTTTCCACCTCTGCTCTGACCTATCGAGAACTGAGAGCGACAGCAGACCAGAATAAGACGTCGGTGTaGCTAAAGAACAAGCTTATT +
Preference number: 4 (lower is better)
Translates to: CFSTSALTYRELRATADQNKTSV*LKNKLI
Trigger: AATAAGCTTGTTCTTTAGTCACACCGACGTCTTATT...CTGGTCTGCTGTCGCTCTCAGTTCTCGATAGGTCAGAGCAGAGGTGGAAAAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000542447.6
CDS-3UTR TCA 90 bp TGCAGGATAAACAGTATTAGAAGATGCAATCGTAACATTGCTGACTTCAGGATGGGCTCACCTGTCCACTaGGAGTGGGGAAGAGAACAA +
Preference number: 4 (lower is better)
Translates to: CRINSIRRCNRNIADFRMGSPVH*EWGREQ
Trigger: TTGTTCTCTTCCCCACTCTCAGTGGACAGGTGAGCC...CATCCTGAAGTCAGCAATGTTACGATTGCATCTTCTAATACTGTTTATCCTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR TCA 90 bp TACAAAATGCGAATGGGAACATATGGATATGGAGTTTCTTACACTGTAACATTGACCTGCACAAATCGCTaGGTCCACGTGGGAGCCCAG +
Preference number: 4 (lower is better)
Translates to: YKMRMGTYGYGVSYTVTLTCTNR*VHVGAQ
Trigger: CTGGGCTCCCACGTGGACTCAGCGATTTGTGCAGGT...CAATGTTACAGTGTAAGAAACTCCATATCCATATGTTCCCATTCGCATTTTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR TCA 90 bp CATTGTGACACACCTCACTTGCAGATAACCCTGTACAGTAATGTAGTTCCACAGCTCACCAGCCTTCACTaGTTACCCTTCTCCAGAAAA +
Preference number: 4 (lower is better)
Translates to: HCDTPHLQITLYSNVVPQLTSLH*LPFSRK
Trigger: TTTTCTGGAGAAGGGTAATCAGTGAAGGCTGGTGAG...CTGTGGAACTACATTACTGTACAGGGTTATCTGCAAGTGAGGTGTGTCACAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR TCA 90 bp ACTCTCTGGGGGAAACGAGGGCCATTTTCACTCTCGTACGCACTCTTCTCAAATTTTATAGAGATGCAATaGATGAGTACTCCCTACTGC +
Preference number: 4 (lower is better)
Translates to: TLWGKRGPFSLSYALFSNFIEMQ*MSTPYC
Trigger: GCAGTAGGGAGTACTCATTCATTGCATCTCTATAAA...ATTTGAGAAGAGTGCGTACGAGAGTGAAAATGGCCCTCGTTTCCCCCAGAGAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR TCA 90 bp CAATGTGTGGGGCCTACACTTTGCAATCTACCTGAGACGGAAAACACCAATCGCTTTGCCTCTATCCTGTaGCTGACATGTAATGAACAA +
Preference number: 4 (lower is better)
Translates to: QCVGPTLCNLPETENTNRFASIL*LTCNEQ
Trigger: TTGTTCATTACATGTCAGTCACAGGATAGAGGCAAA...GCGATTGGTGTTTTCCGTCTCAGGTAGATTGCAAAGTGTAGGCCCCACACATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR TCA 90 bp AACCTTTCTGGACAGCGTAGGGTATCTATACTGAGCCGTCTACAGATACAGAATTGGTTTGCAAGGGCATaGTGTGTCTATATGCAGAGG +
Preference number: 4 (lower is better)
Translates to: NLSGQRRVSILSRLQIQNWFARA*CVYMQR
Trigger: CCTCTGCATATAGACACATCATGCCCTTGCAAACCA...ATTCTGTATCTGTAGACGGCTCAGTATAGATACCCTACGCTGTCCAGAAAGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR TCA 90 bp GGGAAGGAAAAGAGTCTAAGGAATCCCAGCAGGCAAATTCCAAAATGGGAGATTCGCACTCTTCTCAAATaGAGGAGTGGGCAACTTATC +
Preference number: 4 (lower is better)
Translates to: GKEKSLRNPSRQIPKWEIRTLLK*RSGQLI
Trigger: GATAAGTTGCCCACTCCTTCATTTGAGAAGAGTGCG...AATCTCCCATTTTGGAATTTGCCTGCTGGGATTCCTTAGACTCTTTTCCTTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR TCA 90 bp AGTGTGAGAACAATACCAGCCCTTCTTTTGTACCTCCTGCCTTTGTCAAGCCAAAGGCCAAAACATTTGTaGAAACTCTCTGGGGGAAAC +
Preference number: 4 (lower is better)
Translates to: SVRTIPALLLYLLPLSSQRPKHL*KLSGGN
Trigger: GTTTCCCCCAGAGAGTTTTCACAAATGTTTTGGCCT...TTGGCTTGACAAAGGCAGGAGGTACAAAAGAAGGGCTGGTATTGTTCTCACACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR TCA 90 bp TCTCATTGTGACACACCTCACTTGCAGATAACCCTGTACAGTAATGTAGTTCCAGAAGAGGCTGGAAGCTaGGGTTTGGAACACCTGAAA +
Preference number: 4 (lower is better)
Translates to: SHCDTPHLQITLYSNVVPEEAGS*GLEHLK
Trigger: TTTCAGGTGTTCCAAACCTCAGCTTCCAGCCTCTTC...TGGAACTACATTACTGTACAGGGTTATCTGCAAGTGAGGTGTGTCACAATGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR TCA 90 bp TCTCATTGTGACACACCTCACTTGCAGATAACCCTGTACAGTAATGTAGTTCCAAAGTTTCCTGTGTACTaGAGAGGCTGGAAGCTGAGG +
Preference number: 4 (lower is better)
Translates to: SHCDTPHLQITLYSNVVPKFPVY*RGWKLR
Trigger: CCTCAGCTTCCAGCCTCTTCAGTACACAGGAAACTT...TGGAACTACATTACTGTACAGGGTTATCTGCAAGTGAGGTGTGTCACAATGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR TCA 90 bp ACTGAAGTATCGAGTCCTCTGCCCGGACTTTTCAGTACAGCCACAAGACCCATCTGCAGGTTTAAACGATaGAATACACAACTACAGAGA +
Preference number: 4 (lower is better)
Translates to: TEVSSPLPGLFSTATRPICRFKR*NTQLQR
Trigger: TCTCTGTAGTTGTGTATTTCATCGTTTAAACCTGCA...GATGGGTCTTGTGGCTGTACTGAAAAGTCCGGGCAGAGGACTCGATACTTCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR TCA 90 bp GAGCAAATCCTGCTGTCTACCCAGGCCTGGAAGTCTCAGCAACCTAAACAGCAACATCAAGAACAGCTGTaGATGTTATACAATTTCAGC +
Preference number: 4 (lower is better)
Translates to: EQILLSTQAWKSQQPKQQHQEQL*MLYNFS
Trigger: GCTGAAATTGTATAACATTCACAGCTGTTCTTGATG...TTGCTGTTTAGGTTGCTGAGACTTCCAGGCCTGGGTAGACAGCAGGATTTGCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR TCA 90 bp CAATGTGTGGGGCCTACACTTTGCAATCTACCTGAGACGGAAAACACCAATCGCCATAGCCTTTGTAACTaGAGCCAGATAGAGAGAAAA +
Preference number: 4 (lower is better)
Translates to: QCVGPTLCNLPETENTNRHSLCN*SQIERK
Trigger: TTTTCTCTCTATCTGGCTTCAGTTACAAAGGCTATG...GCGATTGGTGTTTTCCGTCTCAGGTAGATTGCAAAGTGTAGGCCCCACACATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR GCA 90 bp GAGTTTTCATTGTTTGTTCACCCAAATCTTTACGACAACAGAGAAGAATGCATTACCTGTGGGGATCAGTaGCGCGGCGGAGAAGAGCAA +
Preference number: 4 (lower is better)
Translates to: EFSLFVHPNLYDNREECITCGDQ*RGGEEQ
Trigger: TTGCTCTTCTCCGCCGCGGCACTGATCCCCACAGGT...AATGCATTCTTCTCTGTTGTCGTAAAGATTTGGGTGAACAAACAATGAAAACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR GCA 90 bp CATTGTGACACACCTCACTTGCAGATAACCCTGTACAGTAATGTAGTTCCACAGTTCGTAAACAGATTCTaGCCATCACCTGTGGGGATC +
Preference number: 4 (lower is better)
Translates to: HCDTPHLQITLYSNVVPQFVNRF*PSPVGI
Trigger: GATCCCCACAGGTGATGGGCAGAATCTGTTTACGAA...CTGTGGAACTACATTACTGTACAGGGTTATCTGCAAGTGAGGTGTGTCACAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR GCA 90 bp GAGTTTTCATTGTTTGTTCACCCAAATCTTTACGACAACAGAGAAGAATGCATTCCAGTGACCGCAGGGTaGTCCACCTGGCAGATCACT +
Preference number: 4 (lower is better)
Translates to: EFSLFVHPNLYDNREECIPVTAG*STWQIT
Trigger: AGTGATCTGCCAGGTGGAGCACCCTGCGGTCACTGG...AATGCATTCTTCTCTGTTGTCGTAAAGATTTGGGTGAACAAACAATGAAAACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR GCA 90 bp TGCAGGATAAACAGTATTAGAAGATGCAATCGTAACATTGCTGACTTCAGGATGAGATACCGCTGGGTCTaGAGGTTTCCAGTGACCGCA +
Preference number: 4 (lower is better)
Translates to: CRINSIRRCNRNIADFRMRYRWV*RFPVTA
Trigger: TGCGGTCACTGGAAACCTGCAGACCCAGCGGTATCT...CATCCTGAAGTCAGCAATGTTACGATTGCATCTTCTAATACTGTTTATCCTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR GCA 90 bp AAGAGTCTAAGGAATCCCAGCAGGCAAATTCCAAAATGGGAGATTTTGGAAAAAAGATACCGCTGGGTCTaGAGGTTTCCAGTGACCGCA +
Preference number: 4 (lower is better)
Translates to: KSLRNPSRQIPKWEILEKRYRWV*RFPVTA
Trigger: TGCGGTCACTGGAAACCTGCAGACCCAGCGGTATCT...TTTTTCCAAAATCTCCCATTTTGGAATTTGCCTGCTGGGATTCCTTAGACTCTT
46% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR GCA 90 bp AAAGAGTCTAAGGAATCCCAGCAGGCAAATTCCAAAATGGGAGATTTTGGAAAAAGCTGTGTCTGCGTCTaGTGCGTCATCGGCTCCTTT +
Preference number: 4 (lower is better)
Translates to: KESKESQQANSKMGDFGKSCVCV*CVIGSF
Trigger: AAAGGAGCCGATGACGCAGCAGACGCAGACACAGCT...TTTTCCAAAATCTCCCATTTTGGAATTTGCCTGCTGGGATTCCTTAGACTCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR GCA 90 bp AGTGTGAGAACAATACCAGCCCTTCTTTTGTACCTCCTGCCTTTGTCAAGCCAAGTAATATACAGTACATaGAGGCCACATCCTACTGCC +
Preference number: 4 (lower is better)
Translates to: SVRTIPALLLYLLPLSSQVIYST*RPHPTA
Trigger: GGCAGTAGGATGTGGCCTGCATGTACTGTATATTAC...TTGGCTTGACAAAGGCAGGAGGTACAAAAGAAGGGCTGGTATTGTTCTCACACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR GCA 90 bp AGTGTGAGAACAATACCAGCCCTTCTTTTGTACCTCCTGCCTTTGTCAAGCCAACTGTTTTTCCACCTCTaGTCTGACCTATCGAGAACT +
Preference number: 4 (lower is better)
Translates to: SVRTIPALLLYLLPLSSQLFFHL*SDLSRT
Trigger: AGTTCTCGATAGGTCAGAGCAGAGGTGGAAAAACAG...TTGGCTTGACAAAGGCAGGAGGTACAAAAGAAGGGCTGGTATTGTTCTCACACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR GCA 90 bp TTCTCACCCTTTGATATGATTATACTATGGTCGGAATGGGTGCTAAGGGCTCGGCTGTTTTTCCACCTCTaGTCTGACCTATCGAGAACT +
Preference number: 4 (lower is better)
Translates to: FSPFDMIILWSEWVLRARLFFHL*SDLSRT
Trigger: AGTTCTCGATAGGTCAGAGCAGAGGTGGAAAAACAG...CCGAGCCCTTAGCACCCATTCCGACCATAGTATAATCATATCAAAGGGTGAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR GCA 90 bp TCTCATTGTGACACACCTCACTTGCAGATAACCCTGTACAGTAATGTAGTTCCATTGCTCACTTCAGCCTaGAAGGCAAGGACGATGACA +
Preference number: 4 (lower is better)
Translates to: SHCDTPHLQITLYSNVVPLLTSA*KARTMT
Trigger: TGTCATCGTCCTTGCCTTGCAGGCTGAAGTGAGCAA...TGGAACTACATTACTGTACAGGGTTATCTGCAAGTGAGGTGTGTCACAATGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR GCA 90 bp CAATGTGTGGGGCCTACACTTTGCAATCTACCTGAGACGGAAAACACCAATCGCTCTGGAGCTTACCTTTaGTTTTCCTATGGAACTTTC +
Preference number: 4 (lower is better)
Translates to: QCVGPTLCNLPETENTNRSGAYL*FSYGTF
Trigger: GAAAGTTCCATAGGAAAAGCAAAGGTAAGCTCCAGA...GCGATTGGTGTTTTCCGTCTCAGGTAGATTGCAAAGTGTAGGCCCCACACATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR GCA 90 bp GACTCCTCTACCTTTTCCCGAGGCTCCCCATCTAAGATATGTTCAAGGTCACTGGATGTATTTGGAGAATaGCAGGCCAAAACATTTGTG +
Preference number: 4 (lower is better)
Translates to: DSSTFSRGSPSKICSRSLDVFGE*QAKTFV
Trigger: CACAAATGTTTTGGCCTGGCATTCTCCAAATACATC...CAGTGACCTTGAACATATCTTAGATGGGGAGCCTCGGGAAAAGGTAGAGGAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR GCA 90 bp TCTCATTGTGACACACCTCACTTGCAGATAACCCTGTACAGTAATGTAGTTCCATTGCTGGGTGACTACTaGGTGCCTGACAGGAACTTT +
Preference number: 4 (lower is better)
Translates to: SHCDTPHLQITLYSNVVPLLGDY*VPDRNF
Trigger: AAAGTTCCTGTCAGGCACGCAGTAGTCACCCAGCAA...TGGAACTACATTACTGTACAGGGTTATCTGCAAGTGAGGTGTGTCACAATGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR GCA 90 bp TGGAAAAAGGAGGAGTCCTTTCTGCCCCAAACCTTTCTGGACAGCGTAGGGTATGCAATACTAAGGCTTTaGTTGGCCATTACCCAAAAT +
Preference number: 4 (lower is better)
Translates to: WKKEESFLPQTFLDSVGYAILRL*LAITQN
Trigger: ATTTTGGGTAATGGCCAAGCAAAGCCTTAGTATTGC...ATACCCTACGCTGTCCAGAAAGGTTTGGGGCAGAAAGGACTCCTCCTTTTTCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR GCA 90 bp GACTCCTCTACCTTTTCCCGAGGCTCCCCATCTAAGATATGTTCAAGGTCACTGGCAATACTAAGGCTTTaGTTGGCCATTACCCAAAAT +
Preference number: 4 (lower is better)
Translates to: DSSTFSRGSPSKICSRSLAILRL*LAITQN
Trigger: ATTTTGGGTAATGGCCAAGCAAAGCCTTAGTATTGC...CAGTGACCTTGAACATATCTTAGATGGGGAGCCTCGGGAAAAGGTAGAGGAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR CCA 90 bp TTCTCACCCTTTGATATGATTATACTATGGTCGGAATGGGTGCTAAGGGCTCGGTCACTCTTATTGACTTaGCAACTGATGGTCGCAACC +
Preference number: 4 (lower is better)
Translates to: FSPFDMIILWSEWVLRARSLLLT*QLMVAT
Trigger: GGTTGCGACCATCAGTTGCCAAGTCAATAAGAGTGA...CCGAGCCCTTAGCACCCATTCCGACCATAGTATAATCATATCAAAGGGTGAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR CCA 90 bp TCTTTCTGGATATCGATCATCAGATTACGTGGTGGGACCAGGACTGTGATGGTGAAATGGTCTGCCTGTTaGGATTCAGTAGCTGAATCA +
Preference number: 4 (lower is better)
Translates to: SFWISIIRLRGGTRTVMVKWSAC*DSVAES
Trigger: TGATTCAGCTACTGAATCCCAACAGGCAGACCATTT...CACCATCACAGTCCTGGTCCCACCACGTAATCTGATGATCGATATCCAGAAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540951.1
CDS-3UTR CCA 90 bp ATACTATGGTCGGAATGGGTGCTAAGGGCTCGGAATAGAGCTGCAGATTATAAAGATCATCAGATTACGTaGTGGGACCAGGACTGTGAT +
Preference number: 4 (lower is better)
Translates to: ILWSEWVLRARNRAADYKDHQIT*WDQDCD
Trigger: ATCACAGTCCTGGTCCCACCACGTAATCTGATGATC...TTTATAATCTGCAGCTCTATTCCGAGCCCTTAGCACCCATTCCGACCATAGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR CCA 90 bp AACCTTTCTGGACAGCGTAGGGTATCTATACTGAGCCGTCTACAGATACAGAATGATCATCAGATTACGTaGTGGGACCAGGACTGTGAT +
Preference number: 4 (lower is better)
Translates to: NLSGQRRVSILSRLQIQNDHQIT*WDQDCD
Trigger: ATCACAGTCCTGGTCCCACCACGTAATCTGATGATC...ATTCTGTATCTGTAGACGGCTCAGTATAGATACCCTACGCTGTCCAGAAAGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR CCA 90 bp GACTCCTCTACCTTTTCCCGAGGCTCCCCATCTAAGATATGTTCAAGGTCACTGACCGCAGTGTCTTTCTaGATATCGATCATCAGATTA +
Preference number: 4 (lower is better)
Translates to: DSSTFSRGSPSKICSRSLTAVSF*ISIIRL
Trigger: TAATCTGATGATCGATATCCAGAAAGACACTGCGGT...CAGTGACCTTGAACATATCTTAGATGGGGAGCCTCGGGAAAAGGTAGAGGAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR CCA 90 bp TGGAAAAAGGAGGAGTCCTTTCTGCCCCAAACCTTTCTGGACAGCGTAGGGTATACCGCAGTGTCTTTCTaGATATCGATCATCAGATTA +
Preference number: 4 (lower is better)
Translates to: WKKEESFLPQTFLDSVGYTAVSF*ISIIRL
Trigger: TAATCTGATGATCGATATCCAGAAAGACACTGCGGT...ATACCCTACGCTGTCCAGAAAGGTTTGGGGCAGAAAGGACTCCTCCTTTTTCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR CCA 90 bp AACCTTTCTGGACAGCGTAGGGTATCTATACTGAGCCGTCTACAGATACAGAATTCAGCATCAGCTGACTaGTCACAGTGTACATGTCTG +
Preference number: 4 (lower is better)
Translates to: NLSGQRRVSILSRLQIQNSASAD*SQCTCL
Trigger: CAGACATGTACACTGTGACCAGTCAGCTGATGCTGA...ATTCTGTATCTGTAGACGGCTCAGTATAGATACCCTACGCTGTCCAGAAAGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR CCA 90 bp CATTGTGACACACCTCACTTGCAGATAACCCTGTACAGTAATGTAGTTCCACAGTCAGCATCAGCTGACTaGTCACAGTGTACATGTCTG +
Preference number: 4 (lower is better)
Translates to: HCDTPHLQITLYSNVVPQSASAD*SQCTCL
Trigger: CAGACATGTACACTGTGACCAGTCAGCTGATGCTGA...CTGTGGAACTACATTACTGTACAGGGTTATCTGCAAGTGAGGTGTGTCACAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR CCA 90 bp TCTCATTGTGACACACCTCACTTGCAGATAACCCTGTACAGTAATGTAGTTCCAGCTGGGGCTTCCCGATaGCTTCACATGTTAACTCAA +
Preference number: 4 (lower is better)
Translates to: SHCDTPHLQITLYSNVVPAGASR*LHMLTQ
Trigger: TTGAGTTAACATGTGAAGCCATCGGGAAGCCCCAGC...TGGAACTACATTACTGTACAGGGTTATCTGCAAGTGAGGTGTGTCACAATGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR CCA 90 bp AAGAGTCTAAGGAATCCCAGCAGGCAAATTCCAAAATGGGAGATTTTGGAAAAAGTTACCATCACAGGCTaGGGCTTCCCGATGGCTTCA +
Preference number: 4 (lower is better)
Translates to: KSLRNPSRQIPKWEILEKVTITG*GFPMAS
Trigger: TGAAGCCATCGGGAAGCCCCAGCCTGTGATGGTAAC...TTTTTCCAAAATCTCCCATTTTGGAATTTGCCTGCTGGGATTCCTTAGACTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR CCA 90 bp AATGAAAGTTTCACACAGATTCGAGTTGGAAATCCCAGCATGACAAATATCTGTTGGTGGTGGTGGTGGTaGTGGTTGTTGTGGGAGGAG +
Preference number: 4 (lower is better)
Translates to: NESFTQIRVGNPSMTNICWWWWW*WLLWEE
Trigger: CTCCTCCCACAACAACCACCACCACCACCACCACCA...ACAGATATTTGTCATGCTGGGATTTCCAACTCGAATCTGTGTGAAACTTTCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000537058.5
CDS-3UTR CCA 90 bp TCCTCTACCTTTTCCCGAGGCTCCCCATCTAAGATATGTTCAAGGTCACTGATTGGTCTGTTTAGGGCATaGAAAAAGGAGGAGTCCTTT +
Preference number: 4 (lower is better)
Translates to: SSTFSRGSPSKICSRSLIGLFRA*KKEESF
Trigger: AAAGGACTCCTCCTTTTTCCATGCCCTAAACAGACC...AATCAGTGACCTTGAACATATCTTAGATGGGGAGCCTCGGGAAAAGGTAGAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR CCA 90 bp AGTGTGAGAACAATACCAGCCCTTCTTTTGTACCTCCTGCCTTTGTCAAGCCAACTACTTCCCCTCCTGTaGCAACTCAAAATTTGTCCA +
Preference number: 4 (lower is better)
Translates to: SVRTIPALLLYLLPLSSQLLPLL*QLKICP
Trigger: TGGACAAATTTTGAGTTGCCACAGGAGGGGAAGTAG...TTGGCTTGACAAAGGCAGGAGGTACAAAAGAAGGGCTGGTATTGTTCTCACACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR CCA 90 bp ACTGAAGTATCGAGTCCTCTGCCCGGACTTTTCAGTACAGCCACAAGACCCATCATTGGGAAAGGTGGATaGAATCATTTGGAACAGAAA +
Preference number: 4 (lower is better)
Translates to: TEVSSPLPGLFSTATRPIIGKGG*NHLEQK
Trigger: TTTCTGTTCCAAATGATTCCATCCACCTTTCCCAAT...GATGGGTCTTGTGGCTGTACTGAAAAGTCCGGGCAGAGGACTCGATACTTCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR CCA 90 bp AGTGTGAGAACAATACCAGCCCTTCTTTTGTACCTCCTGCCTTTGTCAAGCCAAAGAAGTAAGGCCGATTaGGAAAGGTGGATGGAATCA +
Preference number: 4 (lower is better)
Translates to: SVRTIPALLLYLLPLSSQRSKAD*ERWMES
Trigger: TGATTCCATCCACCTTTCCCAATCGGCCTTACTTCT...TTGGCTTGACAAAGGCAGGAGGTACAAAAGAAGGGCTGGTATTGTTCTCACACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR CCA 90 bp TCCTCTACCTTTTCCCGAGGCTCCCCATCTAAGATATGTTCAAGGTCACTGATTATAGGGACTGTTAGCTaGAGTCTGGAGTCTTACCAA +
Preference number: 4 (lower is better)
Translates to: SSTFSRGSPSKICSRSLIIGTVS*SLESYQ
Trigger: TTGGTAAGACTCCAGACTCCAGCTAACAGTCCCTAT...AATCAGTGACCTTGAACATATCTTAGATGGGGAGCCTCGGGAAAAGGTAGAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR CCA 90 bp TGTTTTTCCACCTCTGCTCTGACCTATCGAGAACTGAGAGCGACAGCAGACCAGGGGAACATATGGATATaGAGTTTCTTACACTGTAAC +
Preference number: 4 (lower is better)
Translates to: CFSTSALTYRELRATADQGNIWI*SFLHCN
Trigger: GTTACAGTGTAAGAAACTCCATATCCATATGTTCCC...CTGGTCTGCTGTCGCTCTCAGTTCTCGATAGGTCAGAGCAGAGGTGGAAAAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000542447.6
CDS-3UTR CCA 90 bp TGCAGGATAAACAGTATTAGAAGATGCAATCGTAACATTGCTGACTTCAGGATGAATCAGCAGGCTGGCTaGGCTTGTTGCCCTCTGTAC +
Preference number: 4 (lower is better)
Translates to: CRINSIRRCNRNIADFRMNQQAG*ACCPLY
Trigger: GTACAGAGGGCAACAAGCCCAGCCAGCCTGCTGATT...CATCCTGAAGTCAGCAATGTTACGATTGCATCTTCTAATACTGTTTATCCTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR CCA 90 bp TTTGCATACCCTGTGGAGCTCAAAAGGCAAATGTACAGCAGTCACCACCTCCTGGCGTATTTGGGATCCTaGCAAAAAGGTGTATTAATC +
Preference number: 4 (lower is better)
Translates to: FAYPVELKRQMYSSHHLLAYLGS*QKGVLI
Trigger: GATTAATACACCTTTTTGCCAGGATCCCAAATACGC...CAGGAGGTGGTGACTGCTGTACATTTGCCTTTTGAGCTCCACAGGGTATGCAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR CCA 90 bp CAATGTGTGGGGCCTACACTTTGCAATCTACCTGAGACGGAAAACACCAATCGCGCGTATTTGGGATCCTaGCAAAAAGGTGTATTAATC +
Preference number: 4 (lower is better)
Translates to: QCVGPTLCNLPETENTNRAYLGS*QKGVLI
Trigger: GATTAATACACCTTTTTGCCAGGATCCCAAATACGC...GCGATTGGTGTTTTCCGTCTCAGGTAGATTGCAAAGTGTAGGCCCCACACATTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR CCA 90 bp CCCTTTGATATGATTATACTATGGTCGGAATGGGTGCTAAGGGCTCGGAATAGAAAAGGGCTGCGTATTTaGGATCCTGGCAAAAAGGTG +
Preference number: 4 (lower is better)
Translates to: PFDMIILWSEWVLRARNRKGLRI*DPGKKV
Trigger: CACCTTTTTGCCAGGATCCCAAATACGCAGCCCTTT...TCTATTCCGAGCCCTTAGCACCCATTCCGACCATAGTATAATCATATCAAAGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR CCA 90 bp CATTGTGACACACCTCACTTGCAGATAACCCTGTACAGTAATGTAGTTCCACAGAAAGGGCTGCGTATTTaGGATCCTGGCAAAAAGGTG +
Preference number: 4 (lower is better)
Translates to: HCDTPHLQITLYSNVVPQKGLRI*DPGKKV
Trigger: CACCTTTTTGCCAGGATCCCAAATACGCAGCCCTTT...CTGTGGAACTACATTACTGTACAGGGTTATCTGCAAGTGAGGTGTGTCACAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR CCA 90 bp ACTGAAGTATCGAGTCCTCTGCCCGGACTTTTCAGTACAGCCACAAGACCCATCTTCCAACACCAGCTCTaGAAGACTGAAATATCAATT +
Preference number: 4 (lower is better)
Translates to: TEVSSPLPGLFSTATRPIFQHQL*KTEISI
Trigger: AATTGATATTTCAGTCTTCCAGAGCTGGTGTTGGAA...GATGGGTCTTGTGGCTGTACTGAAAAGTCCGGGCAGAGGACTCGATACTTCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR TCA 90 bp AATTTGTCCACTTATATAAAAGGAACAGACCTCACCTGTCAGGTCTGTTTAGGGGACAGTACGGCGTGTTaGGGCATTTCATCATCGACT +
Preference number: 4 (lower is better)
Translates to: NLSTYIKGTDLTCQVCLGDSTAC*GISSST
Trigger: AGTCGATGATGAAATGCCTCAACACGCCGTACTGTC...CCCTAAACAGACCTGACAGGTGAGGTCTGTTCCTTTTATATAAGTGGACAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR TCA 90 bp TTCTCACCCTTTGATATGATTATACTATGGTCGGAATGGGTGCTAAGGGCTCGGGCTCCTTTGGCTTCATaGGTGAAGTATGTACCTTTA +
Preference number: 4 (lower is better)
Translates to: FSPFDMIILWSEWVLRARAPLAS*VKYVPL
Trigger: TAAAGGTACATACTTCACTCATGAAGCCAAAGGAGC...CCGAGCCCTTAGCACCCATTCCGACCATAGTATAATCATATCAAAGGGTGAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR TCA 90 bp AGTGTGAGAACAATACCAGCCCTTCTTTTGTACCTCCTGCCTTTGTCAAGCCAAGCTCCTTTGGCTTCATaGGTGAAGTATGTACCTTTA +
Preference number: 4 (lower is better)
Translates to: SVRTIPALLLYLLPLSSQAPLAS*VKYVPL
Trigger: TAAAGGTACATACTTCACTCATGAAGCCAAAGGAGC...TTGGCTTGACAAAGGCAGGAGGTACAAAAGAAGGGCTGGTATTGTTCTCACACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR TCA 90 bp GACTCCTCTACCTTTTCCCGAGGCTCCCCATCTAAGATATGTTCAAGGTCACTGCTAAATTCTGAACTATaGAATCTAAGCTGTGCTGGT +
Preference number: 4 (lower is better)
Translates to: DSSTFSRGSPSKICSRSLLNSEL*NLSCAG
Trigger: ACCAGCACAGCTTAGATTTCATAGTTCAGAATTTAG...CAGTGACCTTGAACATATCTTAGATGGGGAGCCTCGGGAAAAGGTAGAGGAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR TCA 90 bp ACTCTCTGGGGGAAACGAGGGCCATTTTCACTCTCGTACGCACTCTTCTCAAATTTGTCAAGCCAAATCTaGAGGAATGAAAGTTTCACA +
Preference number: 4 (lower is better)
Translates to: TLWGKRGPFSLSYALFSNLSSQI*RNESFT
Trigger: TGTGAAACTTTCATTCCTTCAGATTTGGCTTGACAA...ATTTGAGAAGAGTGCGTACGAGAGTGAAAATGGCCCTCGTTTCCCCCAGAGAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR TCA 90 bp AAAGAGTCTAAGGAATCCCAGCAGGCAAATTCCAAAATGGGAGATTTTGGAAAAGACAGCAGACCAGTGTaGGAACAATACCAGCCCTTC +
Preference number: 4 (lower is better)
Translates to: KESKESQQANSKMGDFGKDSRPV*EQYQPF
Trigger: GAAGGGCTGGTATTGTTCTCACACTGGTCTGCTGTC...TTTTCCAAAATCTCCCATTTTGGAATTTGCCTGCTGGGATTCCTTAGACTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR TCA 90 bp AAGAGTCTAAGGAATCCCAGCAGGCAAATTCCAAAATGGGAGATTTTGGAAAAAGACAGCAGACCAGTGTaGGAACAATACCAGCCCTTC +
Preference number: 4 (lower is better)
Translates to: KSLRNPSRQIPKWEILEKDSRPV*EQYQPF
Trigger: GAAGGGCTGGTATTGTTCTCACACTGGTCTGCTGTC...TTTTTCCAAAATCTCCCATTTTGGAATTTGCCTGCTGGGATTCCTTAGACTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR TCA 90 bp TGGAAAAAGGAGGAGTCCTTTCTGCCCCAAACCTTTCTGGACAGCGTAGGGTATTCTCACCCTTTGATATaGTTATACTATGGTCGGAAT +
Preference number: 4 (lower is better)
Translates to: WKKEESFLPQTFLDSVGYSHPLI*LYYGRN
Trigger: ATTCCGACCATAGTATAATCATATCAAAGGGTGAGA...ATACCCTACGCTGTCCAGAAAGGTTTGGGGCAGAAAGGACTCCTCCTTTTTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR TCA 90 bp GACTCCTCTACCTTTTCCCGAGGCTCCCCATCTAAGATATGTTCAAGGTCACTGTCTCACCCTTTGATATaGTTATACTATGGTCGGAAT +
Preference number: 4 (lower is better)
Translates to: DSSTFSRGSPSKICSRSLSHPLI*LYYGRN
Trigger: ATTCCGACCATAGTATAATCATATCAAAGGGTGAGA...CAGTGACCTTGAACATATCTTAGATGGGGAGCCTCGGGAAAAGGTAGAGGAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR TCA 90 bp TTTGCAATCTACCTGAGACGGAAAACACCAATCGCAACACATGAACCTGAGACAACTTTGCAATCTACCTaGGACGGAAAACACCAATCG +
Preference number: 4 (lower is better)
Translates to: FAIYLRRKTPIATHEPETTLQST*DGKHQS
Trigger: CGATTGGTGTTTTCCGTCTCAGGTAGATTGCAAAGT...TGTCTCAGGTTCATGTGTTGCGATTGGTGTTTTCCGTCTCAGGTAGATTGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000542447.6
CDS-3UTR TCA 90 bp TTTGCATACCCTGTGGAGCTCAAAAGGCAAATGTACAGCAGTCACCACCTCCTGAGGAAGAAGGCAGAATaGATTGTTAAGACACAAACT +
Preference number: 4 (lower is better)
Translates to: FAYPVELKRQMYSSHHLLRKKAE*IVKTQT
Trigger: AGTTTGTGTCTTAACAATTCATTCTGCCTTCTTCCT...CAGGAGGTGGTGACTGCTGTACATTTGCCTTTTGAGCTCCACAGGGTATGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR TCA 90 bp ATGGAAAAAGGAGGAGTCCTTTCTGCCCCAAACCTTTCTGGACAGCGTAGGGTACACGTCTTCTTTTTATaGAAGGAGAGAGAACTTTCA +
Preference number: 4 (lower is better)
Translates to: MEKGGVLSAPNLSGQRRVHVFFL*KERELS
Trigger: TGAAAGTTCTCTCTCCTTTCATAAAAAGAAGACGTG...TACCCTACGCTGTCCAGAAAGGTTTGGGGCAGAAAGGACTCCTCCTTTTTCCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR TCA 90 bp GGGAAGGAAAAGAGTCTAAGGAATCCCAGCAGGCAAATTCCAAAATGGGAGATTAACCTAAACAGCAAGTaGGAACAATCTTCTGCAGGC +
Preference number: 4 (lower is better)
Translates to: GKEKSLRNPSRQIPKWEINLNSK*EQSSAG
Trigger: GCCTGCAGAAGATTGTTCTCACTTGCTGTTTAGGTT...AATCTCCCATTTTGGAATTTGCCTGCTGGGATTCCTTAGACTCTTTTCCTTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR TCA 90 bp AAGAGTCTAAGGAATCCCAGCAGGCAAATTCCAAAATGGGAGATTTTGGAAAAAGCAAGGCAAGGACGATaGCAACAGAGCAAATCCTGC +
Preference number: 4 (lower is better)
Translates to: KSLRNPSRQIPKWEILEKARQGR*QQSKSC
Trigger: GCAGGATTTGCTCTGTTGTCATCGTCCTTGCCTTGC...TTTTTCCAAAATCTCCCATTTTGGAATTTGCCTGCTGGGATTCCTTAGACTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR TCA 90 bp AGTGTGAGAACAATACCAGCCCTTCTTTTGTACCTCCTGCCTTTGTCAAGCCAAGACTGCATATCTCACTaGTCTTTCCTAACAACCTTC +
Preference number: 4 (lower is better)
Translates to: SVRTIPALLLYLLPLSSQDCISH*SFLTTF
Trigger: GAAGGTTGTTAGGAAAGATCAGTGAGATATGCAGTC...TTGGCTTGACAAAGGCAGGAGGTACAAAAGAAGGGCTGGTATTGTTCTCACACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR TCA 90 bp TCTCATTGTGACACACCTCACTTGCAGATAACCCTGTACAGTAATGTAGTTCCATTTTTGGCTGAGCGCTaGCTGCATATCTCACTGATC +
Preference number: 4 (lower is better)
Translates to: SHCDTPHLQITLYSNVVPFLAER*LHISLI
Trigger: GATCAGTGAGATATGCAGTCAGCGCTCAGCCAAAAA...TGGAACTACATTACTGTACAGGGTTATCTGCAAGTGAGGTGTGTCACAATGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR TCA 90 bp CATTGTGACACACCTCACTTGCAGATAACCCTGTACAGTAATGTAGTTCCACAGGGCCATATTGCATTCTaGAGGCCCCTCACAATATAT +
Preference number: 4 (lower is better)
Translates to: HCDTPHLQITLYSNVVPQGHIAF*RPLTIY
Trigger: ATATATTGTGAGGGGCCTTCAGAATGCAATATGGCC...CTGTGGAACTACATTACTGTACAGGGTTATCTGCAAGTGAGGTGTGTCACAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR TCA 90 bp CAAGTTCCAATATCACTGTCTCTTTATCATCTAAATAGGGCCAGTTGGACACCTAAGTTTCCTGTGTACTaGAGAGGCTGGAAGCTGAGG +
Preference number: 4 (lower is better)
Translates to: QVPISLSLYHLNRASWTPKFPVY*RGWKLR
Trigger: CCTCAGCTTCCAGCCTCTTCAGTACACAGGAAACTT...AGGTGTCCAACTGGCCCTATTTAGATGATAAAGAGACAGTGATATTGGAACTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR TCA 90 bp GACTCCTCTACCTTTTCCCGAGGCTCCCCATCTAAGATATGTTCAAGGTCACTGTGCAGGTTTAAACGATaGAATACACAACTACAGAGA +
Preference number: 4 (lower is better)
Translates to: DSSTFSRGSPSKICSRSLCRFKR*NTQLQR
Trigger: TCTCTGTAGTTGTGTATTTCATCGTTTAAACCTGCA...CAGTGACCTTGAACATATCTTAGATGGGGAGCCTCGGGAAAAGGTAGAGGAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR TCA 90 bp CCCTTTGATATGATTATACTATGGTCGGAATGGGTGCTAAGGGCTCGGAATAGACTAGCTAACAGAGACTaGTTAGTGCAGAAGATTCCC +
Preference number: 4 (lower is better)
Translates to: PFDMIILWSEWVLRARNRLANRD*LVQKIP
Trigger: GGGAATCTTCTGCACTAATCAGTCTCTGTTAGCTAG...TCTATTCCGAGCCCTTAGCACCCATTCCGACCATAGTATAATCATATCAAAGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR GCA 90 bp TCTCATTGTGACACACCTCACTTGCAGATAACCCTGTACAGTAATGTAGTTCCACTTCCACCTCCGATTTaGCTTTTAGCTCTGTGTTCC +
Preference number: 4 (lower is better)
Translates to: SHCDTPHLQITLYSNVVPLPPPI*LLALCS
Trigger: GGAACACAGAGCTAAAAGGCAAATCGGAGGTGGAAG...TGGAACTACATTACTGTACAGGGTTATCTGCAAGTGAGGTGTGTCACAATGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR GCA 90 bp AATGAAAGTTTCACACAGATTCGAGTTGGAAATCCCAGCATGACAAATATCTGTAGATACCGCTGGGTCTaGAGGTTTCCAGTGACCGCA +
Preference number: 4 (lower is better)
Translates to: NESFTQIRVGNPSMTNICRYRWV*RFPVTA
Trigger: TGCGGTCACTGGAAACCTGCAGACCCAGCGGTATCT...ACAGATATTTGTCATGCTGGGATTTCCAACTCGAATCTGTGTGAAACTTTCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR GCA 90 bp AATGAAAGTTTCACACAGATTCGAGTTGGAAATCCCAGCATGACAAATATCTGTCACGGCATGATCCACTaGCCTGATCGAGCCTTCTTC +
Preference number: 4 (lower is better)
Translates to: NESFTQIRVGNPSMTNICHGMIH*PDRAFF
Trigger: GAAGAAGGCTCGATCAGGGCAGTGGATCATGCCGTG...ACAGATATTTGTCATGCTGGGATTTCCAACTCGAATCTGTGTGAAACTTTCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR GCA 90 bp AAGAGTCTAAGGAATCCCAGCAGGCAAATTCCAAAATGGGAGATTTTGGAAAAAGATTATAGCTGTGTCTaGGTCTGCTGCGTCATCGGC +
Preference number: 4 (lower is better)
Translates to: KSLRNPSRQIPKWEILEKDYSCV*VCCVIG
Trigger: GCCGATGACGCAGCAGACGCAGACACAGCTATAATC...TTTTTCCAAAATCTCCCATTTTGGAATTTGCCTGCTGGGATTCCTTAGACTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR GCA 90 bp GAGCAAATCCTGCTGTCTACCCAGGCCTGGAAGTCTCAGCAACCTAAACAGCAAATGAAATCTAAGCTGTaGTGGTTCTCCTTTTATGAA +
Preference number: 4 (lower is better)
Translates to: EQILLSTQAWKSQQPKQQMKSKL*WFSFYE
Trigger: TTCATAAAAGGAGAACCAGCACAGCTTAGATTTCAT...TTGCTGTTTAGGTTGCTGAGACTTCCAGGCCTGGGTAGACAGCAGGATTTGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR GCA 90 bp GGGAAGGAAAAGAGTCTAAGGAATCCCAGCAGGCAAATTCCAAAATGGGAGATTGTAATATACAGTACATaGAGGCCACATCCTACTGCC +
Preference number: 4 (lower is better)
Translates to: GKEKSLRNPSRQIPKWEIVIYST*RPHPTA
Trigger: GGCAGTAGGATGTGGCCTGCATGTACTGTATATTAC...AATCTCCCATTTTGGAATTTGCCTGCTGGGATTCCTTAGACTCTTTTCCTTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR GCA 90 bp CCCTTTGATATGATTATACTATGGTCGGAATGGGTGCTAAGGGCTCGGAATAGACTGTTTTTCCACCTCTaGTCTGACCTATCGAGAACT +
Preference number: 4 (lower is better)
Translates to: PFDMIILWSEWVLRARNRLFFHL*SDLSRT
Trigger: AGTTCTCGATAGGTCAGAGCAGAGGTGGAAAAACAG...TCTATTCCGAGCCCTTAGCACCCATTCCGACCATAGTATAATCATATCAAAGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR GCA 90 bp ATGGAAAAAGGAGGAGTCCTTTCTGCCCCAAACCTTTCTGGACAGCGTAGGGTATTACATCAGGAACACTaGACTACTGTACACTTTTCA +
Preference number: 4 (lower is better)
Translates to: MEKGGVLSAPNLSGQRRVLHQEH*TTVHFS
Trigger: TGAAAAGTGTACAGTAGTGCAGTGTTCCTGATGTAA...TACCCTACGCTGTCCAGAAAGGTTTGGGGCAGAAAGGACTCCTCCTTTTTCCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000542447.6
CDS-3UTR GCA 90 bp AATTTGTCCACTTATATAAAAGGAACAGACCTCACCTGTCAGGTCTGTTTAGGGGTGGGGCCTACACTTTaGAATCTACCTGAGACGGAA +
Preference number: 4 (lower is better)
Translates to: NLSTYIKGTDLTCQVCLGVGPTL*NLPETE
Trigger: TTCCGTCTCAGGTAGATTGCAAAGTGTAGGCCCCAC...CCCTAAACAGACCTGACAGGTGAGGTCTGTTCCTTTTATATAAGTGGACAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000542447.6
CDS-3UTR GCA 90 bp TACAAAATGCGAATGGGAACATATGGATATGGAGTTTCTTACACTGTAACATTGTGTCCTAGCATCTACTaGCAGCGTTCCTGGCCCCGT +
Preference number: 4 (lower is better)
Translates to: YKMRMGTYGYGVSYTVTLCPSIY*QRSWPR
Trigger: ACGGGGCCAGGAACGCTGGCAGTAGATGCTAGGACA...CAATGTTACAGTGTAAGAAACTCCATATCCATATGTTCCCATTCGCATTTTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR GCA 90 bp GAAGGAAAAGAGTCTAAGGAATCCCAGCAGGCAAATTCCAAAATGGGAGATTTTAGACCCATCCCACCCTaGACACGGAATTGCTTTCTT +
Preference number: 4 (lower is better)
Translates to: EGKESKESQQANSKMGDFRPIPP*TRNCFL
Trigger: AAGAAAGCAATTCCGTGTGCAGGGTGGGATGGGTCT...AAAATCTCCCATTTTGGAATTTGCCTGCTGGGATTCCTTAGACTCTTTTCCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR GCA 90 bp AATGAAAGTTTCACACAGATTCGAGTTGGAAATCCCAGCATGACAAATATCTGTTCGGGAATCGTGAACTaGTGGTTCTGTCGTCGCCGT +
Preference number: 4 (lower is better)
Translates to: NESFTQIRVGNPSMTNICSGIVN*WFCRRR
Trigger: ACGGCGACGACAGAACCAGCAGTTCACGATTCCCGA...ACAGATATTTGTCATGCTGGGATTTCCAACTCGAATCTGTGTGAAACTTTCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537058.5
CDS-3UTR CCA 90 bp CCCTTTGATATGATTATACTATGGTCGGAATGGGTGCTAAGGGCTCGGAATAGATCACTCTTATTGACTTaGCAACTGATGGTCGCAACC +
Preference number: 4 (lower is better)
Translates to: PFDMIILWSEWVLRARNRSLLLT*QLMVAT
Trigger: GGTTGCGACCATCAGTTGCCAAGTCAATAAGAGTGA...TCTATTCCGAGCCCTTAGCACCCATTCCGACCATAGTATAATCATATCAAAGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR CCA 90 bp GTGGGGGATCGGTATAGAGCTGGCAAAAGTATCTTCCTTCATCAGAAATTGAGATCACTCTTATTGACTTaGCAACTGATGGTCGCAACC +
Preference number: 4 (lower is better)
Translates to: VGDRYRAGKSIFLHQKLRSLLLT*QLMVAT
Trigger: GGTTGCGACCATCAGTTGCCAAGTCAATAAGAGTGA...TCTCAATTTCTGATGAAGGAAGATACTTTTGCCAGCTCTATACCGATCCCCCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540951.1
CDS-3UTR CCA 90 bp TCTTTCTGGATATCGATCATCAGATTACGTGGTGGGACCAGGACTGTGATGGTGACCGCAGTGTCTTTCTaGATATCGATCATCAGATTA +
Preference number: 4 (lower is better)
Translates to: SFWISIIRLRGGTRTVMVTAVSF*ISIIRL
Trigger: TAATCTGATGATCGATATCCAGAAAGACACTGCGGT...CACCATCACAGTCCTGGTCCCACCACGTAATCTGATGATCGATATCCAGAAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540951.1
CDS-3UTR CCA 90 bp AATGAAAGTTTCACACAGATTCGAGTTGGAAATCCCAGCATGACAAATATCTGTCCTGATAGTCGTGGCTaGCTTGCTGGCCATAGCAGT +
Preference number: 4 (lower is better)
Translates to: NESFTQIRVGNPSMTNICPDSRG*LAGHSS
Trigger: ACTGCTATGGCCAGCAAGCCAGCCACGACTATCAGG...ACAGATATTTGTCATGCTGGGATTTCCAACTCGAATCTGTGTGAAACTTTCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR CCA 90 bp TCTCATTGTGACACACCTCACTTGCAGATAACCCTGTACAGTAATGTAGTTCCATCAGCATCAGCTGACTaGTCACAGTGTACATGTCTG +
Preference number: 4 (lower is better)
Translates to: SHCDTPHLQITLYSNVVPSASAD*SQCTCL
Trigger: CAGACATGTACACTGTGACCAGTCAGCTGATGCTGA...TGGAACTACATTACTGTACAGGGTTATCTGCAAGTGAGGTGTGTCACAATGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR CCA 90 bp AATTTGTCCACTTATATAAAAGGAACAGACCTCACCTGTCAGGTCTGTTTAGGGACTTCTAGATACCGCTaGGTCTGCAGGTTTCCAGTG +
Preference number: 4 (lower is better)
Translates to: NLSTYIKGTDLTCQVCLGTSRYR*VCRFPV
Trigger: CACTGGAAACCTGCAGACCCAGCGGTATCTAGAAGT...CCCTAAACAGACCTGACAGGTGAGGTCTGTTCCTTTTATATAAGTGGACAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR CCA 90 bp TGGTCGGAATGGGTGCTAAGGGCTCGGAATAGAGCTGCAGATTATAAAATTCATGCCGATTGGGAAAGGTaGATGGAATCATTTGGAACA +
Preference number: 4 (lower is better)
Translates to: WSEWVLRARNRAADYKIHADWER*MESFGT
Trigger: TGTTCCAAATGATTCCATCCACCTTTCCCAATCGGC...ATGAATTTTATAATCTGCAGCTCTATTCCGAGCCCTTAGCACCCATTCCGACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR CCA 90 bp CATTGTGACACACCTCACTTGCAGATAACCCTGTACAGTAATGTAGTTCCACAGAGAAGTAAGGCCGATTaGGAAAGGTGGATGGAATCA +
Preference number: 4 (lower is better)
Translates to: HCDTPHLQITLYSNVVPQRSKAD*ERWMES
Trigger: TGATTCCATCCACCTTTCCCAATCGGCCTTACTTCT...CTGTGGAACTACATTACTGTACAGGGTTATCTGCAAGTGAGGTGTGTCACAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR CCA 90 bp TCCTCTACCTTTTCCCGAGGCTCCCCATCTAAGATATGTTCAAGGTCACTGATTCACACAGATTCGAGTTaGAAATCCCAGCATGACAAA +
Preference number: 4 (lower is better)
Translates to: SSTFSRGSPSKICSRSLIHTDSS*KSQHDK
Trigger: TTTGTCATGCTGGGATTTCCAACTCGAATCTGTGTG...AATCAGTGACCTTGAACATATCTTAGATGGGGAGCCTCGGGAAAAGGTAGAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR CCA 90 bp TTTGCATACCCTGTGGAGCTCAAAAGGCAAATGTACAGCAGTCACCACCTCCTGAGGATCAGTAATTTTTaGCAGATGGTTCTTAAGGCT +
Preference number: 4 (lower is better)
Translates to: FAYPVELKRQMYSSHHLLRISNF*QMVLKA
Trigger: AGCCTTAAGAACCATCTGCCAAAAATTACTGATCCT...CAGGAGGTGGTGACTGCTGTACATTTGCCTTTTGAGCTCCACAGGGTATGCAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR CCA 90 bp GACTCCTCTACCTTTTCCCGAGGCTCCCCATCTAAGATATGTTCAAGGTCACTGAGGATCAGTAATTTTTaGCAGATGGTTCTTAAGGCT +
Preference number: 4 (lower is better)
Translates to: DSSTFSRGSPSKICSRSLRISNF*QMVLKA
Trigger: AGCCTTAAGAACCATCTGCCAAAAATTACTGATCCT...CAGTGACCTTGAACATATCTTAGATGGGGAGCCTCGGGAAAAGGTAGAGGAGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR CCA 90 bp AACCTTTCTGGACAGCGTAGGGTATCTATACTGAGCCGTCTACAGATACAGAATATAGGGACTGTTAGCTaGAGTCTGGAGTCTTACCAA +
Preference number: 4 (lower is better)
Translates to: NLSGQRRVSILSRLQIQNIGTVS*SLESYQ
Trigger: TTGGTAAGACTCCAGACTCCAGCTAACAGTCCCTAT...ATTCTGTATCTGTAGACGGCTCAGTATAGATACCCTACGCTGTCCAGAAAGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR CCA 90 bp CAATGTGTGGGGCCTACACTTTGCAATCTACCTGAGACGGAAAACACCAATCGCTTCAAAACAGAAAGATaGGAGGTCCCAAAAATGAGA +
Preference number: 4 (lower is better)
Translates to: QCVGPTLCNLPETENTNRFKTER*EVPKMR
Trigger: TCTCATTTTTGGGACCTCCCATCTTTCTGTTTTGAA...GCGATTGGTGTTTTCCGTCTCAGGTAGATTGCAAAGTGTAGGCCCCACACATTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000542447.6
CDS-3UTR CCA 90 bp GTCCTTGAGAATGATAGGGCCAATCGCTCTAAACTCAGGACTGGCTGGCTTGTCAATACAAAATGCGAATaGGAACATATGGATATGGAG +
Preference number: 4 (lower is better)
Translates to: VLENDRANRSKLRTGWLVNTKCE*EHMDME
Trigger: CTCCATATCCATATGTTCCCATTCGCATTTTGTATT...GACAAGCCAGCCAGTCCTGAGTTTAGAGCGATTGGCCCTATCATTCTCAAGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR CCA 90 bp AATTTGTCCACTTATATAAAAGGAACAGACCTCACCTGTCAGGTCTGTTTAGGGAGCAGCAATGGGCTTTaGCAGGGAAGTAGGAGCAAA +
Preference number: 4 (lower is better)
Translates to: NLSTYIKGTDLTCQVCLGSSNGL*QGSRSK
Trigger: TTTGCTCCTACTTCCCTGCCAAAGCCCATTGCTGCT...CCCTAAACAGACCTGACAGGTGAGGTCTGTTCCTTTTATATAAGTGGACAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR CCA 90 bp AAGAGTCTAAGGAATCCCAGCAGGCAAATTCCAAAATGGGAGATTTTGGAAAAAGGAATCGTGAACTGCTaGTTCTGTCGTCGCCGTTGT +
Preference number: 4 (lower is better)
Translates to: KSLRNPSRQIPKWEILEKGIVNC*FCRRRC
Trigger: ACAACGGCGACGACAGAACCAGCAGTTCACGATTCC...TTTTTCCAAAATCTCCCATTTTGGAATTTGCCTGCTGGGATTCCTTAGACTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000537058.5
3UTR CAA 72 bp AAGAGAAAAGGGTCATTAAACCTTCTAAGTCGTGGTTaGCAAGGGCATGATGTGTCTATATGCAGAGGAGCC +
Preference number: 4 (lower is better)
Translates to: KRKGSLNLLSRG*QGHDVSICRGA
Trigger: GGCTCCTCTGCATATAGACACATCATGCCCTTGCAAACCACGACTTAGAAGGTTTAATGACCCTTTTCTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR TCA 90 bp AGTGTGAGAACAATACCAGCCCTTCTTTTGTACCTCCTGCCTTTGTCAAGCCAAGAAAAATTCAGCAACTaGAACCTGCTGTCCTTCAAA +
Preference number: 4 (lower is better)
Translates to: SVRTIPALLLYLLPLSSQEKFSN*NLLSFK
Trigger: TTTGAAGGACAGCAGGTTTCAGTTGCTGAATTTTTC...TTGGCTTGACAAAGGCAGGAGGTACAAAAGAAGGGCTGGTATTGTTCTCACACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR TCA 90 bp AATGAAAGTTTCACACAGATTCGAGTTGGAAATCCCAGCATGACAAATATCTGTGTGGGACCAGGACTGTaGTGGTGGTGTAACTTTCCT +
Preference number: 4 (lower is better)
Translates to: NESFTQIRVGNPSMTNICVGPGL*WWCNFP
Trigger: AGGAAAGTTACACCACCATCACAGTCCTGGTCCCAC...ACAGATATTTGTCATGCTGGGATTTCCAACTCGAATCTGTGTGAAACTTTCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR TCA 90 bp AAAGAGTCTAAGGAATCCCAGCAGGCAAATTCCAAAATGGGAGATTTTGGAAAAACCTTCAGCATCAGCTaGCTGGTCACAGTGTACATG +
Preference number: 4 (lower is better)
Translates to: KESKESQQANSKMGDFGKTFSIS*LVTVYM
Trigger: CATGTACACTGTGACCAGTCAGCTGATGCTGAAGGT...TTTTCCAAAATCTCCCATTTTGGAATTTGCCTGCTGGGATTCCTTAGACTCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR TCA 90 bp AAAGAGTCTAAGGAATCCCAGCAGGCAAATTCCAAAATGGGAGATTTTGGAAAAGACAGTACGGCGTGTTaGGGCATTTCATCATCGACT +
Preference number: 4 (lower is better)
Translates to: KESKESQQANSKMGDFGKDSTAC*GISSST
Trigger: AGTCGATGATGAAATGCCTCAACACGCCGTACTGTC...TTTTCCAAAATCTCCCATTTTGGAATTTGCCTGCTGGGATTCCTTAGACTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR TCA 90 bp GAGTTTTCATTGTTTGTTCACCCAAATCTTTACGACAACAGAGAAGAATGCATTCATGATCCACTGCCCTaGTCGAGCCTTCTTCACCTG +
Preference number: 4 (lower is better)
Translates to: EFSLFVHPNLYDNREECIHDPLP*SSLLHL
Trigger: CAGGTGAAGAAGGCTCGATCAGGGCAGTGGATCATG...AATGCATTCTTCTCTGTTGTCGTAAAGATTTGGGTGAACAAACAATGAAAACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR TCA 90 bp TTCTCACCCTTTGATATGATTATACTATGGTCGGAATGGGTGCTAAGGGCTCGGCTTTGGCTTCATGAGTaGAGTATGTACCTTTATGTC +
Preference number: 4 (lower is better)
Translates to: FSPFDMIILWSEWVLRARLWLHE*SMYLYV
Trigger: GACATAAAGGTACATACTTCACTCATGAAGCCAAAG...CCGAGCCCTTAGCACCCATTCCGACCATAGTATAATCATATCAAAGGGTGAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR TCA 90 bp AGTGTGAGAACAATACCAGCCCTTCTTTTGTACCTCCTGCCTTTGTCAAGCCAACTTTGGCTTCATGAGTaGAGTATGTACCTTTATGTC +
Preference number: 4 (lower is better)
Translates to: SVRTIPALLLYLLPLSSQLWLHE*SMYLYV
Trigger: GACATAAAGGTACATACTTCACTCATGAAGCCAAAG...TTGGCTTGACAAAGGCAGGAGGTACAAAAGAAGGGCTGGTATTGTTCTCACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR TCA 90 bp GGGAAGGAAAAGAGTCTAAGGAATCCCAGCAGGCAAATTCCAAAATGGGAGATTGCTCCTTTGGCTTCATaGGTGAAGTATGTACCTTTA +
Preference number: 4 (lower is better)
Translates to: GKEKSLRNPSRQIPKWEIAPLAS*VKYVPL
Trigger: TAAAGGTACATACTTCACTCATGAAGCCAAAGGAGC...AATCTCCCATTTTGGAATTTGCCTGCTGGGATTCCTTAGACTCTTTTCCTTCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR TCA 90 bp TGGTCGGAATGGGTGCTAAGGGCTCGGAATAGAGCTGCAGATTATAAAATTCATACTGCTCTAAGTATTTaGAACATGGGCAGCAGCAAA +
Preference number: 4 (lower is better)
Translates to: WSEWVLRARNRAADYKIHTALSI*NMGSSK
Trigger: TTTGCTGCTGCCCATGTTTCAAATACTTAGAGCAGT...ATGAATTTTATAATCTGCAGCTCTATTCCGAGCCCTTAGCACCCATTCCGACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR TCA 90 bp GAGTTTTCATTGTTTGTTCACCCAAATCTTTACGACAACAGAGAAGAATGCATTGGCTCACCTGTCCACTaGGAGTGGGGAAGAGAACAA +
Preference number: 4 (lower is better)
Translates to: EFSLFVHPNLYDNREECIGSPVH*EWGREQ
Trigger: TTGTTCTCTTCCCCACTCTCAGTGGACAGGTGAGCC...AATGCATTCTTCTCTGTTGTCGTAAAGATTTGGGTGAACAAACAATGAAAACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR TCA 90 bp TGCAGGATAAACAGTATTAGAAGATGCAATCGTAACATTGCTGACTTCAGGATGATGGAACTTTCCCCATaGCGTGGCCAAGGGAGAAAA +
Preference number: 4 (lower is better)
Translates to: CRINSIRRCNRNIADFRMMELSP*RGQGRK
Trigger: TTTTCTCCCTTGGCCACGTCATGGGGAAAGTTCCAT...CATCCTGAAGTCAGCAATGTTACGATTGCATCTTCTAATACTGTTTATCCTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR TCA 90 bp AAGAGTCTAAGGAATCCCAGCAGGCAAATTCCAAAATGGGAGATTTTGGAAAAAATGGAACTTTCCCCATaGCGTGGCCAAGGGAGAAAA +
Preference number: 4 (lower is better)
Translates to: KSLRNPSRQIPKWEILEKMELSP*RGQGRK
Trigger: TTTTCTCCCTTGGCCACGTCATGGGGAAAGTTCCAT...TTTTTCCAAAATCTCCCATTTTGGAATTTGCCTGCTGGGATTCCTTAGACTCTT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR TCA 90 bp AATTTGTCCACTTATATAAAAGGAACAGACCTCACCTGTCAGGTCTGTTTAGGGCTCACCAGCCTTCACTaGTTACCCTTCTCCAGAAAA +
Preference number: 4 (lower is better)
Translates to: NLSTYIKGTDLTCQVCLGLTSLH*LPFSRK
Trigger: TTTTCTGGAGAAGGGTAATCAGTGAAGGCTGGTGAG...CCCTAAACAGACCTGACAGGTGAGGTCTGTTCCTTTTATATAAGTGGACAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR TCA 90 bp TGCAGGATAAACAGTATTAGAAGATGCAATCGTAACATTGCTGACTTCAGGATGGCTGCCAGTTCTTCATaGCAAAGGGCTGCGTATTTG +
Preference number: 4 (lower is better)
Translates to: CRINSIRRCNRNIADFRMAASSS*QRAAYL
Trigger: CAAATACGCAGCCCTTTGTCATGAAGAACTGGCAGC...CATCCTGAAGTCAGCAATGTTACGATTGCATCTTCTAATACTGTTTATCCTGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR TCA 90 bp CAAGTTCCAATATCACTGTCTCTTTATCATCTAAATAGGGCCAGTTGGACACCTCTCCCTTTAATCAGCTaGTACTTGCTGGGTGACTAC +
Preference number: 4 (lower is better)
Translates to: QVPISLSLYHLNRASWTPLPLIS*YLLGDY
Trigger: GTAGTCACCCAGCAAGTATCAGCTGATTAAAGGGAG...AGGTGTCCAACTGGCCCTATTTAGATGATAAAGAGACAGTGATATTGGAACTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR TCA 90 bp TTTGCAATCTACCTGAGACGGAAAACACCAATCGCAACACATGAACCTGAGACACAAAATGATATTCCCTaGTACTATTCCAGTGGGTCC +
Preference number: 4 (lower is better)
Translates to: FAIYLRRKTPIATHEPETQNDIP*YYSSGS
Trigger: GGACCCACTGGAATAGTATCAGGGAATATCATTTTG...TGTCTCAGGTTCATGTGTTGCGATTGGTGTTTTCCGTCTCAGGTAGATTGCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR TCA 90 bp TGGTCGGAATGGGTGCTAAGGGCTCGGAATAGAGCTGCAGATTATAAAATTCATGAGGTTTGGAACACCTaGAAACAGAGAAGATTCTTG +
Preference number: 4 (lower is better)
Translates to: WSEWVLRARNRAADYKIHEVWNT*KQRRFL
Trigger: CAAGAATCTTCTCTGTTTTCAGGTGTTCCAAACCTC...ATGAATTTTATAATCTGCAGCTCTATTCCGAGCCCTTAGCACCCATTCCGACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR GCA 90 bp GAAGGAAAAGAGTCTAAGGAATCCCAGCAGGCAAATTCCAAAATGGGAGATTTTCTTCCACCTCCGATTTaGCTTTTAGCTCTGTGTTCC +
Preference number: 4 (lower is better)
Translates to: EGKESKESQQANSKMGDFLPPPI*LLALCS
Trigger: GGAACACAGAGCTAAAAGGCAAATCGGAGGTGGAAG...AAAATCTCCCATTTTGGAATTTGCCTGCTGGGATTCCTTAGACTCTTTTCCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR GCA 90 bp TACAAAATGCGAATGGGAACATATGGATATGGAGTTTCTTACACTGTAACATTGCACGGCATGATCCACTaGCCTGATCGAGCCTTCTTC +
Preference number: 4 (lower is better)
Translates to: YKMRMGTYGYGVSYTVTLHGMIH*PDRAFF
Trigger: GAAGAAGGCTCGATCAGGGCAGTGGATCATGCCGTG...CAATGTTACAGTGTAAGAAACTCCATATCCATATGTTCCCATTCGCATTTTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000542447.6
CDS-3UTR GCA 90 bp AAAGAGTCTAAGGAATCCCAGCAGGCAAATTCCAAAATGGGAGATTTTGGAAAAAGGAGGAGTCCTTTCTaGCCCAAACCTTTCTGGACA +
Preference number: 4 (lower is better)
Translates to: KESKESQQANSKMGDFGKRRSPF*PKPFWT
Trigger: TGTCCAGAAAGGTTTGGGGCAGAAAGGACTCCTCCT...TTTTCCAAAATCTCCCATTTTGGAATTTGCCTGCTGGGATTCCTTAGACTCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR GCA 90 bp GACTCCTCTACCTTTTCCCGAGGCTCCCCATCTAAGATATGTTCAAGGTCACTGCACAACAGACGAACTTaGTTTTTCCTACAAATTAGT +
Preference number: 4 (lower is better)
Translates to: DSSTFSRGSPSKICSRSLHNRRT*FFLQIS
Trigger: ACTAATTTGTAGGAAAAAGCAAGTTCGTCTGTTGTG...CAGTGACCTTGAACATATCTTAGATGGGGAGCCTCGGGAAAAGGTAGAGGAGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR GCA 90 bp ATACTATGGTCGGAATGGGTGCTAAGGGCTCGGAATAGAGCTGCAGATTATAAACTGAAAATCCGTACATaGTGTTTTTCCACCTCTGCT +
Preference number: 4 (lower is better)
Translates to: ILWSEWVLRARNRAADYKLKIRT*CFSTSA
Trigger: AGCAGAGGTGGAAAAACAGCATGTACGGATTTTCAG...TTTATAATCTGCAGCTCTATTCCGAGCCCTTAGCACCCATTCCGACCATAGTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR GCA 90 bp GGGAAGGAAAAGAGTCTAAGGAATCCCAGCAGGCAAATTCCAAAATGGGAGATTCTGAAAATCCGTACATaGTGTTTTTCCACCTCTGCT +
Preference number: 4 (lower is better)
Translates to: GKEKSLRNPSRQIPKWEILKIRT*CFSTSA
Trigger: AGCAGAGGTGGAAAAACAGCATGTACGGATTTTCAG...AATCTCCCATTTTGGAATTTGCCTGCTGGGATTCCTTAGACTCTTTTCCTTCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR GCA 90 bp TCTCATTGTGACACACCTCACTTGCAGATAACCCTGTACAGTAATGTAGTTCCATGGCCAGACGTTATCTaGACATTTATAAGATCGGCC +
Preference number: 4 (lower is better)
Translates to: SHCDTPHLQITLYSNVVPWPDVI*TFIRSA
Trigger: GGCCGATCTTATAAATGTGCAGATAACGTCTGGCCA...TGGAACTACATTACTGTACAGGGTTATCTGCAAGTGAGGTGTGTCACAATGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR GCA 90 bp CAAGTTCCAATATCACTGTCTCTTTATCATCTAAATAGGGCCAGTTGGACACCTAAGTATCGAGTCCTCTaGCCGGACTTTTCAGTACAG +
Preference number: 4 (lower is better)
Translates to: QVPISLSLYHLNRASWTPKYRVL*PDFSVQ
Trigger: CTGTACTGAAAAGTCCGGGCAGAGGACTCGATACTT...AGGTGTCCAACTGGCCCTATTTAGATGATAAAGAGACAGTGATATTGGAACTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR GCA 90 bp TTTGCAATCTACCTGAGACGGAAAACACCAATCGCAACACATGAACCTGAGACAGTTTTAGTCACCATTTaGCTCTATCCTGTGACTGAC +
Preference number: 4 (lower is better)
Translates to: FAIYLRRKTPIATHEPETVLVTI*LYPVTD
Trigger: GTCAGTCACAGGATAGAGGCAAATGGTGACTAAAAC...TGTCTCAGGTTCATGTGTTGCGATTGGTGTTTTCCGTCTCAGGTAGATTGCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR GCA 90 bp TCTCATTGTGACACACCTCACTTGCAGATAACCCTGTACAGTAATGTAGTTCCATGGGTGACTACTGCGTaGCTGACAGGAACTTTAATA +
Preference number: 4 (lower is better)
Translates to: SHCDTPHLQITLYSNVVPWVTTA*LTGTLI
Trigger: TATTAAAGTTCCTGTCAGGCACGCAGTAGTCACCCA...TGGAACTACATTACTGTACAGGGTTATCTGCAAGTGAGGTGTGTCACAATGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR GCA 90 bp CAATGTGTGGGGCCTACACTTTGCAATCTACCTGAGACGGAAAACACCAATCGCAACAGTATTAGAAGATaGAATCGTAACATTGCTGAC +
Preference number: 4 (lower is better)
Translates to: QCVGPTLCNLPETENTNRNSIRR*NRNIAD
Trigger: GTCAGCAATGTTACGATTGCATCTTCTAATACTGTT...GCGATTGGTGTTTTCCGTCTCAGGTAGATTGCAAAGTGTAGGCCCCACACATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR GCA 90 bp AGTGTGAGAACAATACCAGCCCTTCTTTTGTACCTCCTGCCTTTGTCAAGCCAATTGCAACACTATAGCTaGCCTCATCACTTTATTCTG +
Preference number: 4 (lower is better)
Translates to: SVRTIPALLLYLLPLSSQLQHYS*PHHFIL
Trigger: CAGAATAAAGTGATGAGGGCAGCTATAGTGTTGCAA...TTGGCTTGACAAAGGCAGGAGGTACAAAAGAAGGGCTGGTATTGTTCTCACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR CCA 90 bp ATACTATGGTCGGAATGGGTGCTAAGGGCTCGGAATAGAGCTGCAGATTATAAAAAATGGTCTGCCTGTTaGGATTCAGTAGCTGAATCA +
Preference number: 4 (lower is better)
Translates to: ILWSEWVLRARNRAADYKKWSAC*DSVAES
Trigger: TGATTCAGCTACTGAATCCCAACAGGCAGACCATTT...TTTATAATCTGCAGCTCTATTCCGAGCCCTTAGCACCCATTCCGACCATAGTAT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR CCA 90 bp AAAGAGTCTAAGGAATCCCAGCAGGCAAATTCCAAAATGGGAGATTTTGGAAAAGCTGGGGCTTCCCGATaGCTTCACATGTTAACTCAA +
Preference number: 4 (lower is better)
Translates to: KESKESQQANSKMGDFGKAGASR*LHMLTQ
Trigger: TTGAGTTAACATGTGAAGCCATCGGGAAGCCCCAGC...TTTTCCAAAATCTCCCATTTTGGAATTTGCCTGCTGGGATTCCTTAGACTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR CCA 90 bp GAGTTTTCATTGTTTGTTCACCCAAATCTTTACGACAACAGAGAAGAATGCATTGTTACCATCACAGGCTaGGGCTTCCCGATGGCTTCA +
Preference number: 4 (lower is better)
Translates to: EFSLFVHPNLYDNREECIVTITG*GFPMAS
Trigger: TGAAGCCATCGGGAAGCCCCAGCCTGTGATGGTAAC...AATGCATTCTTCTCTGTTGTCGTAAAGATTTGGGTGAACAAACAATGAAAACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR CCA 90 bp TCTCATTGTGACACACCTCACTTGCAGATAACCCTGTACAGTAATGTAGTTCCACTACTTCCCCTCCTGTaGCAACTCAAAATTTGTCCA +
Preference number: 4 (lower is better)
Translates to: SHCDTPHLQITLYSNVVPLLPLL*QLKICP
Trigger: TGGACAAATTTTGAGTTGCCACAGGAGGGGAAGTAG...TGGAACTACATTACTGTACAGGGTTATCTGCAAGTGAGGTGTGTCACAATGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR CCA 90 bp AACCTTTCTGGACAGCGTAGGGTATCTATACTGAGCCGTCTACAGATACAGAATCACACAGATTCGAGTTaGAAATCCCAGCATGACAAA +
Preference number: 4 (lower is better)
Translates to: NLSGQRRVSILSRLQIQNHTDSS*KSQHDK
Trigger: TTTGTCATGCTGGGATTTCCAACTCGAATCTGTGTG...ATTCTGTATCTGTAGACGGCTCAGTATAGATACCCTACGCTGTCCAGAAAGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR CCA 90 bp CAAGTTCCAATATCACTGTCTCTTTATCATCTAAATAGGGCCAGTTGGACACCTAGTAGCTATGCACTATaGCTGCCATCATGCGAGGAT +
Preference number: 4 (lower is better)
Translates to: QVPISLSLYHLNRASWTPSSYAL*LPSCED
Trigger: ATCCTCGCATGATGGCAGCCATAGTGCATAGCTACT...AGGTGTCCAACTGGCCCTATTTAGATGATAAAGAGACAGTGATATTGGAACTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR CCA 90 bp GGGAAGGAAAAGAGTCTAAGGAATCCCAGCAGGCAAATTCCAAAATGGGAGATTCTGTTAGCTGGAGTCTaGAGTCTTACCAAACATATG +
Preference number: 4 (lower is better)
Translates to: GKEKSLRNPSRQIPKWEILLAGV*SLTKHM
Trigger: CATATGTTTGGTAAGACTCCAGACTCCAGCTAACAG...AATCTCCCATTTTGGAATTTGCCTGCTGGGATTCCTTAGACTCTTTTCCTTCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR CCA 90 bp TTTGCAATCTACCTGAGACGGAAAACACCAATCGCAACACATGAACCTGAGACACTGTTAGCTGGAGTCTaGAGTCTTACCAAACATATG +
Preference number: 4 (lower is better)
Translates to: FAIYLRRKTPIATHEPETLLAGV*SLTKHM
Trigger: CATATGTTTGGTAAGACTCCAGACTCCAGCTAACAG...TGTCTCAGGTTCATGTGTTGCGATTGGTGTTTTCCGTCTCAGGTAGATTGCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000542447.6
CDS-3UTR CCA 90 bp TTCTCACCCTTTGATATGATTATACTATGGTCGGAATGGGTGCTAAGGGCTCGGGATATGATTATACTATaGTCGGAATGGGTGCTAAGG +
Preference number: 4 (lower is better)
Translates to: FSPFDMIILWSEWVLRARDMIIL*SEWVLR
Trigger: CCTTAGCACCCATTCCGACCATAGTATAATCATATC...CCGAGCCCTTAGCACCCATTCCGACCATAGTATAATCATATCAAAGGGTGAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR CCA 90 bp TACAAAATGCGAATGGGAACATATGGATATGGAGTTTCTTACACTGTAACATTGGGGAAAAGGGCACTTTaGGCCTGGCCAGACGTTATC +
Preference number: 4 (lower is better)
Translates to: YKMRMGTYGYGVSYTVTLGKRAL*AWPDVI
Trigger: GATAACGTCTGGCCAGGCCCAAAGTGCCCTTTTCCC...CAATGTTACAGTGTAAGAAACTCCATATCCATATGTTCCCATTCGCATTTTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR CCA 90 bp AACCTTTCTGGACAGCGTAGGGTATCTATACTGAGCCGTCTACAGATACAGAATCATTTGCATACCCTGTaGAGCTCAAAAGGCAAATGT +
Preference number: 4 (lower is better)
Translates to: NLSGQRRVSILSRLQIQNHLHTL*SSKGKC
Trigger: ACATTTGCCTTTTGAGCTCCACAGGGTATGCAAATG...ATTCTGTATCTGTAGACGGCTCAGTATAGATACCCTACGCTGTCCAGAAAGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR CCA 90 bp CCCTTTGATATGATTATACTATGGTCGGAATGGGTGCTAAGGGCTCGGAATAGACTGATACTATTCCAGTaGGTCCTTGAGAATGATAGG +
Preference number: 4 (lower is better)
Translates to: PFDMIILWSEWVLRARNRLILFQ*VLENDR
Trigger: CCTATCATTCTCAAGGACCCACTGGAATAGTATCAG...TCTATTCCGAGCCCTTAGCACCCATTCCGACCATAGTATAATCATATCAAAGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR CCA 90 bp AAGAGTCTAAGGAATCCCAGCAGGCAAATTCCAAAATGGGAGATTTTGGAAAAACAGGTCTGCTGTGTCTaGGCAAACAGCTTTTGTGGA +
Preference number: 4 (lower is better)
Translates to: KSLRNPSRQIPKWEILEKQVCCV*ANSFCG
Trigger: TCCACAAAAGCTGTTTGCCCAGACACAGCAGACCTG...TTTTTCCAAAATCTCCCATTTTGGAATTTGCCTGCTGGGATTCCTTAGACTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR CCA 90 bp GAAGGAAAAGAGTCTAAGGAATCCCAGCAGGCAAATTCCAAAATGGGAGATTTTCCCTTCTCGATGCATTaGTGTCTCTGCAAGGAAATC +
Preference number: 4 (lower is better)
Translates to: EGKESKESQQANSKMGDFPFSMH*CLCKEI
Trigger: GATTTCCTTGCAGAGACACCAATGCATCGAGAAGGG...AAAATCTCCCATTTTGGAATTTGCCTGCTGGGATTCCTTAGACTCTTTTCCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR TCA 90 bp AACCTTTCTGGACAGCGTAGGGTATCTATACTGAGCCGTCTACAGATACAGAATGAAAAATTCAGCAACTaGAACCTGCTGTCCTTCAAA +
Preference number: 4 (lower is better)
Translates to: NLSGQRRVSILSRLQIQNEKFSN*NLLSFK
Trigger: TTTGAAGGACAGCAGGTTTCAGTTGCTGAATTTTTC...ATTCTGTATCTGTAGACGGCTCAGTATAGATACCCTACGCTGTCCAGAAAGGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR TCA 90 bp GTGGGGGATCGGTATAGAGCTGGCAAAAGTATCTTCCTTCATCAGAAATTGAGAGAAAAATTCAGCAACTaGAACCTGCTGTCCTTCAAA +
Preference number: 4 (lower is better)
Translates to: VGDRYRAGKSIFLHQKLREKFSN*NLLSFK
Trigger: TTTGAAGGACAGCAGGTTTCAGTTGCTGAATTTTTC...TCTCAATTTCTGATGAAGGAAGATACTTTTGCCAGCTCTATACCGATCCCCCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000540951.1
CDS-3UTR TCA 90 bp CATTGTGACACACCTCACTTGCAGATAACCCTGTACAGTAATGTAGTTCCACAGGAAAAATTCAGCAACTaGAACCTGCTGTCCTTCAAA +
Preference number: 4 (lower is better)
Translates to: HCDTPHLQITLYSNVVPQEKFSN*NLLSFK
Trigger: TTTGAAGGACAGCAGGTTTCAGTTGCTGAATTTTTC...CTGTGGAACTACATTACTGTACAGGGTTATCTGCAAGTGAGGTGTGTCACAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR TCA 90 bp ATACTATGGTCGGAATGGGTGCTAAGGGCTCGGAATAGAGCTGCAGATTATAAACTTTGGCTTCATGAGTaGAGTATGTACCTTTATGTC +
Preference number: 4 (lower is better)
Translates to: ILWSEWVLRARNRAADYKLWLHE*SMYLYV
Trigger: GACATAAAGGTACATACTTCACTCATGAAGCCAAAG...TTTATAATCTGCAGCTCTATTCCGAGCCCTTAGCACCCATTCCGACCATAGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR TCA 90 bp CATTGTGACACACCTCACTTGCAGATAACCCTGTACAGTAATGTAGTTCCACAGAGTTGGACACCTCATTaGAACAAAAAGGCTGATCTA +
Preference number: 4 (lower is better)
Translates to: HCDTPHLQITLYSNVVPQSWTPH*NKKADL
Trigger: TAGATCAGCCTTTTTGTTTCAATGAGGTGTCCAACT...CTGTGGAACTACATTACTGTACAGGGTTATCTGCAAGTGAGGTGTGTCACAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR TCA 90 bp AGTGTGAGAACAATACCAGCCCTTCTTTTGTACCTCCTGCCTTTGTCAAGCCAACTAAATTCTGAACTATaGAATCTAAGCTGTGCTGGT +
Preference number: 4 (lower is better)
Translates to: SVRTIPALLLYLLPLSSQLNSEL*NLSCAG
Trigger: ACCAGCACAGCTTAGATTTCATAGTTCAGAATTTAG...TTGGCTTGACAAAGGCAGGAGGTACAAAAGAAGGGCTGGTATTGTTCTCACACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR TCA 90 bp TCTCATTGTGACACACCTCACTTGCAGATAACCCTGTACAGTAATGTAGTTCCAACTGCTCTAAGTATTTaGAACATGGGCAGCAGCAAA +
Preference number: 4 (lower is better)
Translates to: SHCDTPHLQITLYSNVVPTALSI*NMGSSK
Trigger: TTTGCTGCTGCCCATGTTTCAAATACTTAGAGCAGT...TGGAACTACATTACTGTACAGGGTTATCTGCAAGTGAGGTGTGTCACAATGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR TCA 90 bp ATACTATGGTCGGAATGGGTGCTAAGGGCTCGGAATAGAGCTGCAGATTATAAAAATTCAATCTCATTGTaGCACACCTCACTTGCAGAT +
Preference number: 4 (lower is better)
Translates to: ILWSEWVLRARNRAADYKNSISL*HTSLAD
Trigger: ATCTGCAAGTGAGGTGTGTCACAATGAGATTGAATT...TTTATAATCTGCAGCTCTATTCCGAGCCCTTAGCACCCATTCCGACCATAGTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR TCA 90 bp TTTGCAATCTACCTGAGACGGAAAACACCAATCGCAACACATGAACCTGAGACACCAAATCTGAAGGAATaGAAGTTTCACACAGATTCG +
Preference number: 4 (lower is better)
Translates to: FAIYLRRKTPIATHEPETPNLKE*KFHTDS
Trigger: CGAATCTGTGTGAAACTTTCATTCCTTCAGATTTGG...TGTCTCAGGTTCATGTGTTGCGATTGGTGTTTTCCGTCTCAGGTAGATTGCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000542447.6
CDS-3UTR TCA 90 bp CCCTTTGATATGATTATACTATGGTCGGAATGGGTGCTAAGGGCTCGGAATAGACCAAATCTGAAGGAATaGAAGTTTCACACAGATTCG +
Preference number: 4 (lower is better)
Translates to: PFDMIILWSEWVLRARNRPNLKE*KFHTDS
Trigger: CGAATCTGTGTGAAACTTTCATTCCTTCAGATTTGG...TCTATTCCGAGCCCTTAGCACCCATTCCGACCATAGTATAATCATATCAAAGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR TCA 90 bp ATACTATGGTCGGAATGGGTGCTAAGGGCTCGGAATAGAGCTGCAGATTATAAACCAAATCTGAAGGAATaGAAGTTTCACACAGATTCG +
Preference number: 4 (lower is better)
Translates to: ILWSEWVLRARNRAADYKPNLKE*KFHTDS
Trigger: CGAATCTGTGTGAAACTTTCATTCCTTCAGATTTGG...TTTATAATCTGCAGCTCTATTCCGAGCCCTTAGCACCCATTCCGACCATAGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR TCA 90 bp TACAAAATGCGAATGGGAACATATGGATATGGAGTTTCTTACACTGTAACATTGGACAGCAGACCAGTGTaGGAACAATACCAGCCCTTC +
Preference number: 4 (lower is better)
Translates to: YKMRMGTYGYGVSYTVTLDSRPV*EQYQPF
Trigger: GAAGGGCTGGTATTGTTCTCACACTGGTCTGCTGTC...CAATGTTACAGTGTAAGAAACTCCATATCCATATGTTCCCATTCGCATTTTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000542447.6
CDS-3UTR TCA 90 bp AAAGAGTCTAAGGAATCCCAGCAGGCAAATTCCAAAATGGGAGATTTTGGAAAATTTTTGGCTGAGCGCTaGCTGCATATCTCACTGATC +
Preference number: 4 (lower is better)
Translates to: KESKESQQANSKMGDFGKFLAER*LHISLI
Trigger: GATCAGTGAGATATGCAGTCAGCGCTCAGCCAAAAA...TTTTCCAAAATCTCCCATTTTGGAATTTGCCTGCTGGGATTCCTTAGACTCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR TCA 90 bp TGCAGGATAAACAGTATTAGAAGATGCAATCGTAACATTGCTGACTTCAGGATGTGGTTTGCAAGGGCATaGTGTGTCTATATGCAGAGG +
Preference number: 4 (lower is better)
Translates to: CRINSIRRCNRNIADFRMWFARA*CVYMQR
Trigger: CCTCTGCATATAGACACATCATGCCCTTGCAAACCA...CATCCTGAAGTCAGCAATGTTACGATTGCATCTTCTAATACTGTTTATCCTGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR TCA 90 bp TACAAAATGCGAATGGGAACATATGGATATGGAGTTTCTTACACTGTAACATTGCTTATCAAGATCCTTTaGGCGGGGACGGCTTCTAGC +
Preference number: 4 (lower is better)
Translates to: YKMRMGTYGYGVSYTVTLLIKIL*AGTASS
Trigger: GCTAGAAGCCGTCCCCGCTCAAAGGATCTTGATAAG...CAATGTTACAGTGTAAGAAACTCCATATCCATATGTTCCCATTCGCATTTTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR TCA 90 bp CAAGTTCCAATATCACTGTCTCTTTATCATCTAAATAGGGCCAGTTGGACACCTATACAAATTTCACCCTaGAGGAATGTGGCTGCCAGT +
Preference number: 4 (lower is better)
Translates to: QVPISLSLYHLNRASWTPIQISP*RNVAAS
Trigger: ACTGGCAGCCACATTCCTTCAGGGTGAAATTTGTAT...AGGTGTCCAACTGGCCCTATTTAGATGATAAAGAGACAGTGATATTGGAACTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR TCA 90 bp TCCTCTACCTTTTCCCGAGGCTCCCCATCTAAGATATGTTCAAGGTCACTGATTCATCAAGAACAGCTGTaGATGTTATACAATTTCAGC +
Preference number: 4 (lower is better)
Translates to: SSTFSRGSPSKICSRSLIHQEQL*MLYNFS
Trigger: GCTGAAATTGTATAACATTCACAGCTGTTCTTGATG...AATCAGTGACCTTGAACATATCTTAGATGGGGAGCCTCGGGAAAAGGTAGAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR GCA 90 bp AAGAGTCTAAGGAATCCCAGCAGGCAAATTCCAAAATGGGAGATTTTGGAAAAATTCGTAAACAGATTCTaGCCATCACCTGTGGGGATC +
Preference number: 4 (lower is better)
Translates to: KSLRNPSRQIPKWEILEKFVNRF*PSPVGI
Trigger: GATCCCCACAGGTGATGGGCAGAATCTGTTTACGAA...TTTTTCCAAAATCTCCCATTTTGGAATTTGCCTGCTGGGATTCCTTAGACTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR GCA 90 bp AAGAGTCTAAGGAATCCCAGCAGGCAAATTCCAAAATGGGAGATTTTGGAAAAACTTCCACCTCCGATTTaGCTTTTAGCTCTGTGTTCC +
Preference number: 4 (lower is better)
Translates to: KSLRNPSRQIPKWEILEKLPPPI*LLALCS
Trigger: GGAACACAGAGCTAAAAGGCAAATCGGAGGTGGAAG...TTTTTCCAAAATCTCCCATTTTGGAATTTGCCTGCTGGGATTCCTTAGACTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR GCA 90 bp TACAAAATGCGAATGGGAACATATGGATATGGAGTTTCTTACACTGTAACATTGGATTATAGCTGTGTCTaGGTCTGCTGCGTCATCGGC +
Preference number: 4 (lower is better)
Translates to: YKMRMGTYGYGVSYTVTLDYSCV*VCCVIG
Trigger: GCCGATGACGCAGCAGACGCAGACACAGCTATAATC...CAATGTTACAGTGTAAGAAACTCCATATCCATATGTTCCCATTCGCATTTTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000542447.6
CDS-3UTR GCA 90 bp AGTGTGAGAACAATACCAGCCCTTCTTTTGTACCTCCTGCCTTTGTCAAGCCAATTACATCAGGAACACTaGACTACTGTACACTTTTCA +
Preference number: 4 (lower is better)
Translates to: SVRTIPALLLYLLPLSSQLHQEH*TTVHFS
Trigger: TGAAAAGTGTACAGTAGTGCAGTGTTCCTGATGTAA...TTGGCTTGACAAAGGCAGGAGGTACAAAAGAAGGGCTGGTATTGTTCTCACACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000542447.6
CDS-3UTR GCA 90 bp AATGAAAGTTTCACACAGATTCGAGTTGGAAATCCCAGCATGACAAATATCTGTTGGCTCAAGGGGAGATaGACAGCCTTCAGTCTTTCT +
Preference number: 4 (lower is better)
Translates to: NESFTQIRVGNPSMTNICWLKGR*TAFSLS
Trigger: AGAAAGACTGAAGGCTGTGCATCTCCCCTTGAGCCA...ACAGATATTTGTCATGCTGGGATTTCCAACTCGAATCTGTGTGAAACTTTCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR GCA 90 bp AAGAGTCTAAGGAATCCCAGCAGGCAAATTCCAAAATGGGAGATTTTGGAAAAACCCTGCACACGGAATTaGTTTCTTCTCCCCATACAA +
Preference number: 4 (lower is better)
Translates to: KSLRNPSRQIPKWEILEKPCTRN*FLLPIQ
Trigger: TTGTATGGGGAGAAGAAAGCAATTCCGTGTGCAGGG...TTTTTCCAAAATCTCCCATTTTGGAATTTGCCTGCTGGGATTCCTTAGACTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR GCA 90 bp AAGAGTCTAAGGAATCCCAGCAGGCAAATTCCAAAATGGGAGATTTTGGAAAAATTCATGACAAAGGGCTaGGTATTTGGGATCCTGGCA +
Preference number: 4 (lower is better)
Translates to: KSLRNPSRQIPKWEILEKFMTKG*VFGILA
Trigger: TGCCAGGATCCCAAATACGCAGCCCTTTGTCATGAA...TTTTTCCAAAATCTCCCATTTTGGAATTTGCCTGCTGGGATTCCTTAGACTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR GCA 90 bp AAAGAGTCTAAGGAATCCCAGCAGGCAAATTCCAAAATGGGAGATTTTGGAAAATTCATGACAAAGGGCTaGGTATTTGGGATCCTGGCA +
Preference number: 4 (lower is better)
Translates to: KESKESQQANSKMGDFGKFMTKG*VFGILA
Trigger: TGCCAGGATCCCAAATACGCAGCCCTTTGTCATGAA...TTTTCCAAAATCTCCCATTTTGGAATTTGCCTGCTGGGATTCCTTAGACTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR GCA 90 bp TTTGCAATCTACCTGAGACGGAAAACACCAATCGCAACACATGAACCTGAGACAAACAGAGAAGATTCTTaGTTTCAGGTCTCAGTTCAG +
Preference number: 4 (lower is better)
Translates to: FAIYLRRKTPIATHEPETNREDS*FQVSVQ
Trigger: CTGAACTGAGACCTGAAAGCAAGAATCTTCTCTGTT...TGTCTCAGGTTCATGTGTTGCGATTGGTGTTTTCCGTCTCAGGTAGATTGCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR GCA 90 bp TGGTCGGAATGGGTGCTAAGGGCTCGGAATAGAGCTGCAGATTATAAAATTCATAACAGAGAAGATTCTTaGTTTCAGGTCTCAGTTCAG +
Preference number: 4 (lower is better)
Translates to: WSEWVLRARNRAADYKIHNREDS*FQVSVQ
Trigger: CTGAACTGAGACCTGAAAGCAAGAATCTTCTCTGTT...ATGAATTTTATAATCTGCAGCTCTATTCCGAGCCCTTAGCACCCATTCCGACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR GCA 90 bp TCTCATTGTGACACACCTCACTTGCAGATAACCCTGTACAGTAATGTAGTTCCATTGCTATTAAAGGCCTaGATTAGGCTCTTCCAACAC +
Preference number: 4 (lower is better)
Translates to: SHCDTPHLQITLYSNVVPLLLKA*IRLFQH
Trigger: GTGTTGGAAGAGCCTAATGCAGGCCTTTAATAGCAA...TGGAACTACATTACTGTACAGGGTTATCTGCAAGTGAGGTGTGTCACAATGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR GCA 90 bp CAAGTTCCAATATCACTGTCTCTTTATCATCTAAATAGGGCCAGTTGGACACCTCTTTTTAATCAGGTCTaGTGTGTCTGGGCAAACAGC +
Preference number: 4 (lower is better)
Translates to: QVPISLSLYHLNRASWTPLFNQV*CVWANS
Trigger: GCTGTTTGCCCAGACACAGCAGACCTGATTAAAAAG...AGGTGTCCAACTGGCCCTATTTAGATGATAAAGAGACAGTGATATTGGAACTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR GCA 90 bp ATACTATGGTCGGAATGGGTGCTAAGGGCTCGGAATAGAGCTGCAGATTATAAAATTCATGTTCCTAATTaGAACACTATAGCTGCCCTC +
Preference number: 4 (lower is better)
Translates to: ILWSEWVLRARNRAADYKIHVPN*NTIAAL
Trigger: GAGGGCAGCTATAGTGTTGCAATTAGGAACATGAAT...TTTATAATCTGCAGCTCTATTCCGAGCCCTTAGCACCCATTCCGACCATAGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR CCA 90 bp CAAGTTCCAATATCACTGTCTCTTTATCATCTAAATAGGGCCAGTTGGACACCTTCACTCTTATTGACTTaGCAACTGATGGTCGCAACC +
Preference number: 4 (lower is better)
Translates to: QVPISLSLYHLNRASWTPSLLLT*QLMVAT
Trigger: GGTTGCGACCATCAGTTGCCAAGTCAATAAGAGTGA...AGGTGTCCAACTGGCCCTATTTAGATGATAAAGAGACAGTGATATTGGAACTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR CCA 90 bp CCCTTTGATATGATTATACTATGGTCGGAATGGGTGCTAAGGGCTCGGAATAGAACCGCAGTGTCTTTCTaGATATCGATCATCAGATTA +
Preference number: 4 (lower is better)
Translates to: PFDMIILWSEWVLRARNRTAVSF*ISIIRL
Trigger: TAATCTGATGATCGATATCCAGAAAGACACTGCGGT...TCTATTCCGAGCCCTTAGCACCCATTCCGACCATAGTATAATCATATCAAAGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR CCA 90 bp AAGAGTCTAAGGAATCCCAGCAGGCAAATTCCAAAATGGGAGATTTTGGAAAAATCAGCATCAGCTGACTaGTCACAGTGTACATGTCTG +
Preference number: 4 (lower is better)
Translates to: KSLRNPSRQIPKWEILEKSASAD*SQCTCL
Trigger: CAGACATGTACACTGTGACCAGTCAGCTGATGCTGA...TTTTTCCAAAATCTCCCATTTTGGAATTTGCCTGCTGGGATTCCTTAGACTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR CCA 90 bp AATGAAAGTTTCACACAGATTCGAGTTGGAAATCCCAGCATGACAAATATCTGTACTTCTAGATACCGCTaGGTCTGCAGGTTTCCAGTG +
Preference number: 4 (lower is better)
Translates to: NESFTQIRVGNPSMTNICTSRYR*VCRFPV
Trigger: CACTGGAAACCTGCAGACCCAGCGGTATCTAGAAGT...ACAGATATTTGTCATGCTGGGATTTCCAACTCGAATCTGTGTGAAACTTTCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR CCA 90 bp GAAGGAAAAGAGTCTAAGGAATCCCAGCAGGCAAATTCCAAAATGGGAGATTTTGGTCTGTTTAGGGCATaGAAAAAGGAGGAGTCCTTT +
Preference number: 4 (lower is better)
Translates to: EGKESKESQQANSKMGDFGLFRA*KKEESF
Trigger: AAAGGACTCCTCCTTTTTCCATGCCCTAAACAGACC...AAAATCTCCCATTTTGGAATTTGCCTGCTGGGATTCCTTAGACTCTTTTCCTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR CCA 90 bp AGTGTGAGAACAATACCAGCCCTTCTTTTGTACCTCCTGCCTTTGTCAAGCCAAATTGGGAAAGGTGGATaGAATCATTTGGAACAGAAA +
Preference number: 4 (lower is better)
Translates to: SVRTIPALLLYLLPLSSQIGKGG*NHLEQK
Trigger: TTTCTGTTCCAAATGATTCCATCCACCTTTCCCAAT...TTGGCTTGACAAAGGCAGGAGGTACAAAAGAAGGGCTGGTATTGTTCTCACACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR CCA 90 bp AATTTGTCCACTTATATAAAAGGAACAGACCTCACCTGTCAGGTCTGTTTAGGGGCCGATTGGGAAAGGTaGATGGAATCATTTGGAACA +
Preference number: 4 (lower is better)
Translates to: NLSTYIKGTDLTCQVCLGADWER*MESFGT
Trigger: TGTTCCAAATGATTCCATCCACCTTTCCCAATCGGC...CCCTAAACAGACCTGACAGGTGAGGTCTGTTCCTTTTATATAAGTGGACAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR CCA 90 bp GAAGGAAAAGAGTCTAAGGAATCCCAGCAGGCAAATTCCAAAATGGGAGATTTTGCCGATTGGGAAAGGTaGATGGAATCATTTGGAACA +
Preference number: 4 (lower is better)
Translates to: EGKESKESQQANSKMGDFADWER*MESFGT
Trigger: TGTTCCAAATGATTCCATCCACCTTTCCCAATCGGC...AAAATCTCCCATTTTGGAATTTGCCTGCTGGGATTCCTTAGACTCTTTTCCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR CCA 90 bp TCCTCTACCTTTTCCCGAGGCTCCCCATCTAAGATATGTTCAAGGTCACTGATTGTAATTTTTGGCAGATaGTTCTTAAGGCTGAGGAAA +
Preference number: 4 (lower is better)
Translates to: SSTFSRGSPSKICSRSLIVIFGR*FLRLRK
Trigger: TTTCCTCAGCCTTAAGAACCATCTGCCAAAAATTAC...AATCAGTGACCTTGAACATATCTTAGATGGGGAGCCTCGGGAAAAGGTAGAGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR CCA 90 bp AGTGTGAGAACAATACCAGCCCTTCTTTTGTACCTCCTGCCTTTGTCAAGCCAAAAGGGATGTTCATTGTaGCTTTTTGTCTTGGTTAAG +
Preference number: 4 (lower is better)
Translates to: SVRTIPALLLYLLPLSSQKGCSL*LFVLVK
Trigger: CTTAACCAAGACAAAAAGCCACAATGAACATCCCTT...TTGGCTTGACAAAGGCAGGAGGTACAAAAGAAGGGCTGGTATTGTTCTCACACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR CCA 90 bp AAGAGTCTAAGGAATCCCAGCAGGCAAATTCCAAAATGGGAGATTTTGGAAAAAATACTATGGTCGGAATaGGTGCTAAGGGCTCGGAAT +
Preference number: 4 (lower is better)
Translates to: KSLRNPSRQIPKWEILEKILWSE*VLRARN
Trigger: ATTCCGAGCCCTTAGCACCCATTCCGACCATAGTAT...TTTTTCCAAAATCTCCCATTTTGGAATTTGCCTGCTGGGATTCCTTAGACTCTT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR CCA 90 bp AACCTTTCTGGACAGCGTAGGGTATCTATACTGAGCCGTCTACAGATACAGAATGATATGATTATACTATaGTCGGAATGGGTGCTAAGG +
Preference number: 4 (lower is better)
Translates to: NLSGQRRVSILSRLQIQNDMIIL*SEWVLR
Trigger: CCTTAGCACCCATTCCGACCATAGTATAATCATATC...ATTCTGTATCTGTAGACGGCTCAGTATAGATACCCTACGCTGTCCAGAAAGGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR CCA 90 bp CATTGTGACACACCTCACTTGCAGATAACCCTGTACAGTAATGTAGTTCCACAGGATATGATTATACTATaGTCGGAATGGGTGCTAAGG +
Preference number: 4 (lower is better)
Translates to: HCDTPHLQITLYSNVVPQDMIIL*SEWVLR
Trigger: CCTTAGCACCCATTCCGACCATAGTATAATCATATC...CTGTGGAACTACATTACTGTACAGGGTTATCTGCAAGTGAGGTGTGTCACAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR CCA 90 bp ATACTATGGTCGGAATGGGTGCTAAGGGCTCGGAATAGAGCTGCAGATTATAAAGCGAATGGGAACATATaGATATGGAGTTTCTTACAC +
Preference number: 4 (lower is better)
Translates to: ILWSEWVLRARNRAADYKANGNI*IWSFLH
Trigger: GTGTAAGAAACTCCATATCCATATGTTCCCATTCGC...TTTATAATCTGCAGCTCTATTCCGAGCCCTTAGCACCCATTCCGACCATAGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000542447.6
CDS-3UTR CCA 90 bp AAAGAGTCTAAGGAATCCCAGCAGGCAAATTCCAAAATGGGAGATTTTGGAAAAAAAGTAAGAGACAGGTaGAGCAGCCAACACAGGGAA +
Preference number: 4 (lower is better)
Translates to: KESKESQQANSKMGDFGKKVRDR*SSQHRE
Trigger: TTCCCTGTGTTGGCTGCTCCACCTGTCTCTTACTTT...TTTTCCAAAATCTCCCATTTTGGAATTTGCCTGCTGGGATTCCTTAGACTCTTT
42% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR CCA 90 bp TTCTCACCCTTTGATATGATTATACTATGGTCGGAATGGGTGCTAAGGGCTCGGTTCCAACACCAGCTCTaGAAGACTGAAATATCAATT +
Preference number: 4 (lower is better)
Translates to: FSPFDMIILWSEWVLRARFQHQL*KTEISI
Trigger: AATTGATATTTCAGTCTTCCAGAGCTGGTGTTGGAA...CCGAGCCCTTAGCACCCATTCCGACCATAGTATAATCATATCAAAGGGTGAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR TCA 90 bp AATGAAAGTTTCACACAGATTCGAGTTGGAAATCCCAGCATGACAAATATCTGTTTGGGATTCAGTAGCTaGATCACAGAGTCGTCACTC +
Preference number: 4 (lower is better)
Translates to: NESFTQIRVGNPSMTNICLGFSS*ITESSL
Trigger: GAGTGACGACTCTGTGATTCAGCTACTGAATCCCAA...ACAGATATTTGTCATGCTGGGATTTCCAACTCGAATCTGTGTGAAACTTTCATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR TCA 90 bp TCTCATTGTGACACACCTCACTTGCAGATAACCCTGTACAGTAATGTAGTTCCAGAAAAATTCAGCAACTaGAACCTGCTGTCCTTCAAA +
Preference number: 4 (lower is better)
Translates to: SHCDTPHLQITLYSNVVPEKFSN*NLLSFK
Trigger: TTTGAAGGACAGCAGGTTTCAGTTGCTGAATTTTTC...TGGAACTACATTACTGTACAGGGTTATCTGCAAGTGAGGTGTGTCACAATGAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR TCA 90 bp GAGTTTTCATTGTTTGTTCACCCAAATCTTTACGACAACAGAGAAGAATGCATTACCTTCAGCATCAGCTaGCTGGTCACAGTGTACATG +
Preference number: 4 (lower is better)
Translates to: EFSLFVHPNLYDNREECITFSIS*LVTVYM
Trigger: CATGTACACTGTGACCAGTCAGCTGATGCTGAAGGT...AATGCATTCTTCTCTGTTGTCGTAAAGATTTGGGTGAACAAACAATGAAAACTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR TCA 90 bp TCTCATTGTGACACACCTCACTTGCAGATAACCCTGTACAGTAATGTAGTTCCAAATTCAATCTCATTGTaGCACACCTCACTTGCAGAT +
Preference number: 4 (lower is better)
Translates to: SHCDTPHLQITLYSNVVPNSISL*HTSLAD
Trigger: ATCTGCAAGTGAGGTGTGTCACAATGAGATTGAATT...TGGAACTACATTACTGTACAGGGTTATCTGCAAGTGAGGTGTGTCACAATGAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR TCA 90 bp AAAGAGTCTAAGGAATCCCAGCAGGCAAATTCCAAAATGGGAGATTTTGGAAAAGTAGGGTATCTATACTaGGCCGTCTACAGATACAGA +
Preference number: 4 (lower is better)
Translates to: KESKESQQANSKMGDFGKVGYLY*AVYRYR
Trigger: TCTGTATCTGTAGACGGCTCAGTATAGATACCCTAC...TTTTCCAAAATCTCCCATTTTGGAATTTGCCTGCTGGGATTCCTTAGACTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR TCA 90 bp AACCTTTCTGGACAGCGTAGGGTATCTATACTGAGCCGTCTACAGATACAGAATTTGTCAAGCCAAATCTaGAGGAATGAAAGTTTCACA +
Preference number: 4 (lower is better)
Translates to: NLSGQRRVSILSRLQIQNLSSQI*RNESFT
Trigger: TGTGAAACTTTCATTCCTTCAGATTTGGCTTGACAA...ATTCTGTATCTGTAGACGGCTCAGTATAGATACCCTACGCTGTCCAGAAAGGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR TCA 90 bp CATTGTGACACACCTCACTTGCAGATAACCCTGTACAGTAATGTAGTTCCACAGTTGTCAAGCCAAATCTaGAGGAATGAAAGTTTCACA +
Preference number: 4 (lower is better)
Translates to: HCDTPHLQITLYSNVVPQLSSQI*RNESFT
Trigger: TGTGAAACTTTCATTCCTTCAGATTTGGCTTGACAA...CTGTGGAACTACATTACTGTACAGGGTTATCTGCAAGTGAGGTGTGTCACAATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR TCA 90 bp CATTGTGACACACCTCACTTGCAGATAACCCTGTACAGTAATGTAGTTCCACAGTCTCACCCTTTGATATaGTTATACTATGGTCGGAAT +
Preference number: 4 (lower is better)
Translates to: HCDTPHLQITLYSNVVPQSHPLI*LYYGRN
Trigger: ATTCCGACCATAGTATAATCATATCAAAGGGTGAGA...CTGTGGAACTACATTACTGTACAGGGTTATCTGCAAGTGAGGTGTGTCACAATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR TCA 90 bp GAGTTTTCATTGTTTGTTCACCCAAATCTTTACGACAACAGAGAAGAATGCATTGGGAGGTCCCAAAAATaGGATGCCAATTCTGTGAGC +
Preference number: 4 (lower is better)
Translates to: EFSLFVHPNLYDNREECIGRSQK*DANSVS
Trigger: GCTCACAGAATTGGCATCTCATTTTTGGGACCTCCC...AATGCATTCTTCTCTGTTGTCGTAAAGATTTGGGTGAACAAACAATGAAAACTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000542447.6
CDS-3UTR TCA 90 bp AAGAGTCTAAGGAATCCCAGCAGGCAAATTCCAAAATGGGAGATTTTGGAAAAAACTTTGCAATCTACCTaGGACGGAAAACACCAATCG +
Preference number: 4 (lower is better)
Translates to: KSLRNPSRQIPKWEILEKTLQST*DGKHQS
Trigger: CGATTGGTGTTTTCCGTCTCAGGTAGATTGCAAAGT...TTTTTCCAAAATCTCCCATTTTGGAATTTGCCTGCTGGGATTCCTTAGACTCTT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000542447.6
CDS-3UTR TCA 90 bp AAAGAGTCTAAGGAATCCCAGCAGGCAAATTCCAAAATGGGAGATTTTGGAAAAGGCCATATTGCATTCTaGAGGCCCCTCACAATATAT +
Preference number: 4 (lower is better)
Translates to: KESKESQQANSKMGDFGKGHIAF*RPLTIY
Trigger: ATATATTGTGAGGGGCCTTCAGAATGCAATATGGCC...TTTTCCAAAATCTCCCATTTTGGAATTTGCCTGCTGGGATTCCTTAGACTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR GCA 90 bp AATGAAAGTTTCACACAGATTCGAGTTGGAAATCCCAGCATGACAAATATCTGTTTCGTAAACAGATTCTaGCCATCACCTGTGGGGATC +
Preference number: 4 (lower is better)
Translates to: NESFTQIRVGNPSMTNICFVNRF*PSPVGI
Trigger: GATCCCCACAGGTGATGGGCAGAATCTGTTTACGAA...ACAGATATTTGTCATGCTGGGATTTCCAACTCGAATCTGTGTGAAACTTTCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR GCA 90 bp AGTGTGAGAACAATACCAGCCCTTCTTTTGTACCTCCTGCCTTTGTCAAGCCAAATGAAATCTAAGCTGTaGTGGTTCTCCTTTTATGAA +
Preference number: 4 (lower is better)
Translates to: SVRTIPALLLYLLPLSSQMKSKL*WFSFYE
Trigger: TTCATAAAAGGAGAACCAGCACAGCTTAGATTTCAT...TTGGCTTGACAAAGGCAGGAGGTACAAAAGAAGGGCTGGTATTGTTCTCACACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR GCA 90 bp GAGTTTTCATTGTTTGTTCACCCAAATCTTTACGACAACAGAGAAGAATGCATTAGGAGGAGTCCTTTCTaGCCCAAACCTTTCTGGACA +
Preference number: 4 (lower is better)
Translates to: EFSLFVHPNLYDNREECIRRSPF*PKPFWT
Trigger: TGTCCAGAAAGGTTTGGGGCAGAAAGGACTCCTCCT...AATGCATTCTTCTCTGTTGTCGTAAAGATTTGGGTGAACAAACAATGAAAACTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR GCA 90 bp AGTGTGAGAACAATACCAGCCCTTCTTTTGTACCTCCTGCCTTTGTCAAGCCAACACAACAGACGAACTTaGTTTTTCCTACAAATTAGT +
Preference number: 4 (lower is better)
Translates to: SVRTIPALLLYLLPLSSQHNRRT*FFLQIS
Trigger: ACTAATTTGTAGGAAAAAGCAAGTTCGTCTGTTGTG...TTGGCTTGACAAAGGCAGGAGGTACAAAAGAAGGGCTGGTATTGTTCTCACACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR GCA 90 bp AATTTGTCCACTTATATAAAAGGAACAGACCTCACCTGTCAGGTCTGTTTAGGGCTGAAAATCCGTACATaGTGTTTTTCCACCTCTGCT +
Preference number: 4 (lower is better)
Translates to: NLSTYIKGTDLTCQVCLGLKIRT*CFSTSA
Trigger: AGCAGAGGTGGAAAAACAGCATGTACGGATTTTCAG...CCCTAAACAGACCTGACAGGTGAGGTCTGTTCCTTTTATATAAGTGGACAAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR GCA 90 bp TACAAAATGCGAATGGGAACATATGGATATGGAGTTTCTTACACTGTAACATTGTTGCTCACTTCAGCCTaGAAGGCAAGGACGATGACA +
Preference number: 4 (lower is better)
Translates to: YKMRMGTYGYGVSYTVTLLLTSA*KARTMT
Trigger: TGTCATCGTCCTTGCCTTGCAGGCTGAAGTGAGCAA...CAATGTTACAGTGTAAGAAACTCCATATCCATATGTTCCCATTCGCATTTTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR GCA 90 bp AATGAAAGTTTCACACAGATTCGAGTTGGAAATCCCAGCATGACAAATATCTGTCCCTGCACACGGAATTaGTTTCTTCTCCCCATACAA +
Preference number: 4 (lower is better)
Translates to: NESFTQIRVGNPSMTNICPCTRN*FLLPIQ
Trigger: TTGTATGGGGAGAAGAAAGCAATTCCGTGTGCAGGG...ACAGATATTTGTCATGCTGGGATTTCCAACTCGAATCTGTGTGAAACTTTCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR GCA 90 bp GGGAAGGAAAAGAGTCTAAGGAATCCCAGCAGGCAAATTCCAAAATGGGAGATTTGTTGGAATACATTCTaGATTTCAATAGGCAAGGCT +
Preference number: 4 (lower is better)
Translates to: GKEKSLRNPSRQIPKWEICWNTF*ISIGKA
Trigger: AGCCTTGCCTATTGAAATGCAGAATGTATTCCAACA...AATCTCCCATTTTGGAATTTGCCTGCTGGGATTCCTTAGACTCTTTTCCTTCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR GCA 90 bp TGGTCGGAATGGGTGCTAAGGGCTCGGAATAGAGCTGCAGATTATAAAATTCATTGTTGGAATACATTCTaGATTTCAATAGGCAAGGCT +
Preference number: 4 (lower is better)
Translates to: WSEWVLRARNRAADYKIHCWNTF*ISIGKA
Trigger: AGCCTTGCCTATTGAAATGCAGAATGTATTCCAACA...ATGAATTTTATAATCTGCAGCTCTATTCCGAGCCCTTAGCACCCATTCCGACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR CCA 90 bp GAGTTTTCATTGTTTGTTCACCCAAATCTTTACGACAACAGAGAAGAATGCATTGGTGTAACTTTCCTGTaGGGGATCGGTATAGAGCTG +
Preference number: 4 (lower is better)
Translates to: EFSLFVHPNLYDNREECIGVTFL*GIGIEL
Trigger: CAGCTCTATACCGATCCCCCACAGGAAAGTTACACC...AATGCATTCTTCTCTGTTGTCGTAAAGATTTGGGTGAACAAACAATGAAAACTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR CCA 90 bp TCTCATTGTGACACACCTCACTTGCAGATAACCCTGTACAGTAATGTAGTTCCAACCGCAGTGTCTTTCTaGATATCGATCATCAGATTA +
Preference number: 4 (lower is better)
Translates to: SHCDTPHLQITLYSNVVPTAVSF*ISIIRL
Trigger: TAATCTGATGATCGATATCCAGAAAGACACTGCGGT...TGGAACTACATTACTGTACAGGGTTATCTGCAAGTGAGGTGTGTCACAATGAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR CCA 90 bp AAAGAGTCTAAGGAATCCCAGCAGGCAAATTCCAAAATGGGAGATTTTGGAAAAGGTCTGTTTAGGGCATaGAAAAAGGAGGAGTCCTTT +
Preference number: 4 (lower is better)
Translates to: KESKESQQANSKMGDFGKGLFRA*KKEESF
Trigger: AAAGGACTCCTCCTTTTTCCATGCCCTAAACAGACC...TTTTCCAAAATCTCCCATTTTGGAATTTGCCTGCTGGGATTCCTTAGACTCTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR CCA 90 bp AAGAGTCTAAGGAATCCCAGCAGGCAAATTCCAAAATGGGAGATTTTGGAAAAACTACTTCCCCTCCTGTaGCAACTCAAAATTTGTCCA +
Preference number: 4 (lower is better)
Translates to: KSLRNPSRQIPKWEILEKLLPLL*QLKICP
Trigger: TGGACAAATTTTGAGTTGCCACAGGAGGGGAAGTAG...TTTTTCCAAAATCTCCCATTTTGGAATTTGCCTGCTGGGATTCCTTAGACTCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR CCA 90 bp GGGAAGGAAAAGAGTCTAAGGAATCCCAGCAGGCAAATTCCAAAATGGGAGATTATTGGGAAAGGTGGATaGAATCATTTGGAACAGAAA +
Preference number: 4 (lower is better)
Translates to: GKEKSLRNPSRQIPKWEIIGKGG*NHLEQK
Trigger: TTTCTGTTCCAAATGATTCCATCCACCTTTCCCAAT...AATCTCCCATTTTGGAATTTGCCTGCTGGGATTCCTTAGACTCTTTTCCTTCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR CCA 90 bp TGCAGGATAAACAGTATTAGAAGATGCAATCGTAACATTGCTGACTTCAGGATGGCCGATTGGGAAAGGTaGATGGAATCATTTGGAACA +
Preference number: 4 (lower is better)
Translates to: CRINSIRRCNRNIADFRMADWER*MESFGT
Trigger: TGTTCCAAATGATTCCATCCACCTTTCCCAATCGGC...CATCCTGAAGTCAGCAATGTTACGATTGCATCTTCTAATACTGTTTATCCTGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR CCA 90 bp AAGAGTCTAAGGAATCCCAGCAGGCAAATTCCAAAATGGGAGATTTTGGAAAAAGCCGATTGGGAAAGGTaGATGGAATCATTTGGAACA +
Preference number: 4 (lower is better)
Translates to: KSLRNPSRQIPKWEILEKADWER*MESFGT
Trigger: TGTTCCAAATGATTCCATCCACCTTTCCCAATCGGC...TTTTTCCAAAATCTCCCATTTTGGAATTTGCCTGCTGGGATTCCTTAGACTCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR CCA 90 bp AAAGAGTCTAAGGAATCCCAGCAGGCAAATTCCAAAATGGGAGATTTTGGAAAAAGAAGTAAGGCCGATTaGGAAAGGTGGATGGAATCA +
Preference number: 4 (lower is better)
Translates to: KESKESQQANSKMGDFGKRSKAD*ERWMES
Trigger: TGATTCCATCCACCTTTCCCAATCGGCCTTACTTCT...TTTTCCAAAATCTCCCATTTTGGAATTTGCCTGCTGGGATTCCTTAGACTCTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR CCA 90 bp AATTTGTCCACTTATATAAAAGGAACAGACCTCACCTGTCAGGTCTGTTTAGGGCACACAGATTCGAGTTaGAAATCCCAGCATGACAAA +
Preference number: 4 (lower is better)
Translates to: NLSTYIKGTDLTCQVCLGHTDSS*KSQHDK
Trigger: TTTGTCATGCTGGGATTTCCAACTCGAATCTGTGTG...CCCTAAACAGACCTGACAGGTGAGGTCTGTTCCTTTTATATAAGTGGACAAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR CCA 90 bp CCCTTTGATATGATTATACTATGGTCGGAATGGGTGCTAAGGGCTCGGAATAGAGTAATTTTTGGCAGATaGTTCTTAAGGCTGAGGAAA +
Preference number: 4 (lower is better)
Translates to: PFDMIILWSEWVLRARNRVIFGR*FLRLRK
Trigger: TTTCCTCAGCCTTAAGAACCATCTGCCAAAAATTAC...TCTATTCCGAGCCCTTAGCACCCATTCCGACCATAGTATAATCATATCAAAGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR CCA 90 bp GAAGGAAAAGAGTCTAAGGAATCCCAGCAGGCAAATTCCAAAATGGGAGATTTTCTGTTAGCTGGAGTCTaGAGTCTTACCAAACATATG +
Preference number: 4 (lower is better)
Translates to: EGKESKESQQANSKMGDFLLAGV*SLTKHM
Trigger: CATATGTTTGGTAAGACTCCAGACTCCAGCTAACAG...AAAATCTCCCATTTTGGAATTTGCCTGCTGGGATTCCTTAGACTCTTTTCCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR CCA 90 bp ATACTATGGTCGGAATGGGTGCTAAGGGCTCGGAATAGAGCTGCAGATTATAAAAAGGGATGTTCATTGTaGCTTTTTGTCTTGGTTAAG +
Preference number: 4 (lower is better)
Translates to: ILWSEWVLRARNRAADYKKGCSL*LFVLVK
Trigger: CTTAACCAAGACAAAAAGCCACAATGAACATCCCTT...TTTATAATCTGCAGCTCTATTCCGAGCCCTTAGCACCCATTCCGACCATAGTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR CCA 90 bp CATTGTGACACACCTCACTTGCAGATAACCCTGTACAGTAATGTAGTTCCACAGTTCAAAACAGAAAGATaGGAGGTCCCAAAAATGAGA +
Preference number: 4 (lower is better)
Translates to: HCDTPHLQITLYSNVVPQFKTER*EVPKMR
Trigger: TCTCATTTTTGGGACCTCCCATCTTTCTGTTTTGAA...CTGTGGAACTACATTACTGTACAGGGTTATCTGCAAGTGAGGTGTGTCACAATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000542447.6
CDS-3UTR CCA 90 bp GGGAAGGAAAAGAGTCTAAGGAATCCCAGCAGGCAAATTCCAAAATGGGAGATTGGGAACATATGGATATaGAGTTTCTTACACTGTAAC +
Preference number: 4 (lower is better)
Translates to: GKEKSLRNPSRQIPKWEIGNIWI*SFLHCN
Trigger: GTTACAGTGTAAGAAACTCCATATCCATATGTTCCC...AATCTCCCATTTTGGAATTTGCCTGCTGGGATTCCTTAGACTCTTTTCCTTCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000542447.6
CDS-3UTR CCA 90 bp AATTTGTCCACTTATATAAAAGGAACAGACCTCACCTGTCAGGTCTGTTTAGGGGAAATACAGCATCGGTaGCCCATTCAGATTAAGTGT +
Preference number: 4 (lower is better)
Translates to: NLSTYIKGTDLTCQVCLGEIQHR*PIQIKC
Trigger: ACACTTAATCTGAATGGGCCACCGATGCTGTATTTC...CCCTAAACAGACCTGACAGGTGAGGTCTGTTCCTTTTATATAAGTGGACAAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR TCA 90 bp CAAGTTCCAATATCACTGTCTCTTTATCATCTAAATAGGGCCAGTTGGACACCTCTTTGGCTTCATGAGTaGAGTATGTACCTTTATGTC +
Preference number: 4 (lower is better)
Translates to: QVPISLSLYHLNRASWTPLWLHE*SMYLYV
Trigger: GACATAAAGGTACATACTTCACTCATGAAGCCAAAG...AGGTGTCCAACTGGCCCTATTTAGATGATAAAGAGACAGTGATATTGGAACTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR TCA 90 bp TGCAGGATAAACAGTATTAGAAGATGCAATCGTAACATTGCTGACTTCAGGATGACTGCTCTAAGTATTTaGAACATGGGCAGCAGCAAA +
Preference number: 4 (lower is better)
Translates to: CRINSIRRCNRNIADFRMTALSI*NMGSSK
Trigger: TTTGCTGCTGCCCATGTTTCAAATACTTAGAGCAGT...CATCCTGAAGTCAGCAATGTTACGATTGCATCTTCTAATACTGTTTATCCTGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR TCA 90 bp AAGAGTCTAAGGAATCCCAGCAGGCAAATTCCAAAATGGGAGATTTTGGAAAAAACTGCTCTAAGTATTTaGAACATGGGCAGCAGCAAA +
Preference number: 4 (lower is better)
Translates to: KSLRNPSRQIPKWEILEKTALSI*NMGSSK
Trigger: TTTGCTGCTGCCCATGTTTCAAATACTTAGAGCAGT...TTTTTCCAAAATCTCCCATTTTGGAATTTGCCTGCTGGGATTCCTTAGACTCTT
40% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR TCA 90 bp TCTCATTGTGACACACCTCACTTGCAGATAACCCTGTACAGTAATGTAGTTCCATTGTCAAGCCAAATCTaGAGGAATGAAAGTTTCACA +
Preference number: 4 (lower is better)
Translates to: SHCDTPHLQITLYSNVVPLSSQI*RNESFT
Trigger: TGTGAAACTTTCATTCCTTCAGATTTGGCTTGACAA...TGGAACTACATTACTGTACAGGGTTATCTGCAAGTGAGGTGTGTCACAATGAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR TCA 90 bp AATGAAAGTTTCACACAGATTCGAGTTGGAAATCCCAGCATGACAAATATCTGTAACCTAAACAGCAAGTaGGAACAATCTTCTGCAGGC +
Preference number: 4 (lower is better)
Translates to: NESFTQIRVGNPSMTNICNLNSK*EQSSAG
Trigger: GCCTGCAGAAGATTGTTCTCACTTGCTGTTTAGGTT...ACAGATATTTGTCATGCTGGGATTTCCAACTCGAATCTGTGTGAAACTTTCATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR TCA 90 bp AAAGAGTCTAAGGAATCCCAGCAGGCAAATTCCAAAATGGGAGATTTTGGAAAAGAGGTTTGGAACACCTaGAAACAGAGAAGATTCTTG +
Preference number: 4 (lower is better)
Translates to: KESKESQQANSKMGDFGKEVWNT*KQRRFL
Trigger: CAAGAATCTTCTCTGTTTTCAGGTGTTCCAAACCTC...TTTTCCAAAATCTCCCATTTTGGAATTTGCCTGCTGGGATTCCTTAGACTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR GCA 90 bp GAGTTTTCATTGTTTGTTCACCCAAATCTTTACGACAACAGAGAAGAATGCATTCTTCCACCTCCGATTTaGCTTTTAGCTCTGTGTTCC +
Preference number: 4 (lower is better)
Translates to: EFSLFVHPNLYDNREECILPPPI*LLALCS
Trigger: GGAACACAGAGCTAAAAGGCAAATCGGAGGTGGAAG...AATGCATTCTTCTCTGTTGTCGTAAAGATTTGGGTGAACAAACAATGAAAACTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR GCA 90 bp GGGAAGGAAAAGAGTCTAAGGAATCCCAGCAGGCAAATTCCAAAATGGGAGATTATGAAATCTAAGCTGTaGTGGTTCTCCTTTTATGAA +
Preference number: 4 (lower is better)
Translates to: GKEKSLRNPSRQIPKWEIMKSKL*WFSFYE
Trigger: TTCATAAAAGGAGAACCAGCACAGCTTAGATTTCAT...AATCTCCCATTTTGGAATTTGCCTGCTGGGATTCCTTAGACTCTTTTCCTTCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR GCA 90 bp AACCTTTCTGGACAGCGTAGGGTATCTATACTGAGCCGTCTACAGATACAGAATATGAAATCTAAGCTGTaGTGGTTCTCCTTTTATGAA +
Preference number: 4 (lower is better)
Translates to: NLSGQRRVSILSRLQIQNMKSKL*WFSFYE
Trigger: TTCATAAAAGGAGAACCAGCACAGCTTAGATTTCAT...ATTCTGTATCTGTAGACGGCTCAGTATAGATACCCTACGCTGTCCAGAAAGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR GCA 90 bp AACCTTTCTGGACAGCGTAGGGTATCTATACTGAGCCGTCTACAGATACAGAATCACAACAGACGAACTTaGTTTTTCCTACAAATTAGT +
Preference number: 4 (lower is better)
Translates to: NLSGQRRVSILSRLQIQNHNRRT*FFLQIS
Trigger: ACTAATTTGTAGGAAAAAGCAAGTTCGTCTGTTGTG...ATTCTGTATCTGTAGACGGCTCAGTATAGATACCCTACGCTGTCCAGAAAGGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR GCA 90 bp AACCTTTCTGGACAGCGTAGGGTATCTATACTGAGCCGTCTACAGATACAGAATAACAGTATTAGAAGATaGAATCGTAACATTGCTGAC +
Preference number: 4 (lower is better)
Translates to: NLSGQRRVSILSRLQIQNNSIRR*NRNIAD
Trigger: GTCAGCAATGTTACGATTGCATCTTCTAATACTGTT...ATTCTGTATCTGTAGACGGCTCAGTATAGATACCCTACGCTGTCCAGAAAGGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR GCA 90 bp CAAGTTCCAATATCACTGTCTCTTTATCATCTAAATAGGGCCAGTTGGACACCTATTCATGTTCCTAATTaGAACACTATAGCTGCCCTC +
Preference number: 4 (lower is better)
Translates to: QVPISLSLYHLNRASWTPIHVPN*NTIAAL
Trigger: GAGGGCAGCTATAGTGTTGCAATTAGGAACATGAAT...AGGTGTCCAACTGGCCCTATTTAGATGATAAAGAGACAGTGATATTGGAACTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR CCA 90 bp AAGAGTCTAAGGAATCCCAGCAGGCAAATTCCAAAATGGGAGATTTTGGAAAAAAAATGGTCTGCCTGTTaGGATTCAGTAGCTGAATCA +
Preference number: 4 (lower is better)
Translates to: KSLRNPSRQIPKWEILEKKWSAC*DSVAES
Trigger: TGATTCAGCTACTGAATCCCAACAGGCAGACCATTT...TTTTTCCAAAATCTCCCATTTTGGAATTTGCCTGCTGGGATTCCTTAGACTCTT
40% GC, longest homopolymer 8 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR CCA 90 bp AAAGAGTCTAAGGAATCCCAGCAGGCAAATTCCAAAATGGGAGATTTTGGAAAAAAATGGTCTGCCTGTTaGGATTCAGTAGCTGAATCA +
Preference number: 4 (lower is better)
Translates to: KESKESQQANSKMGDFGKKWSAC*DSVAES
Trigger: TGATTCAGCTACTGAATCCCAACAGGCAGACCATTT...TTTTCCAAAATCTCCCATTTTGGAATTTGCCTGCTGGGATTCCTTAGACTCTTT
40% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR CCA 90 bp TACAAAATGCGAATGGGAACATATGGATATGGAGTTTCTTACACTGTAACATTGGATCATCAGATTACGTaGTGGGACCAGGACTGTGAT +
Preference number: 4 (lower is better)
Translates to: YKMRMGTYGYGVSYTVTLDHQIT*WDQDCD
Trigger: ATCACAGTCCTGGTCCCACCACGTAATCTGATGATC...CAATGTTACAGTGTAAGAAACTCCATATCCATATGTTCCCATTCGCATTTTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000542447.6
CDS-3UTR CCA 90 bp GAGTTTTCATTGTTTGTTCACCCAAATCTTTACGACAACAGAGAAGAATGCATTGATCATCAGATTACGTaGTGGGACCAGGACTGTGAT +
Preference number: 4 (lower is better)
Translates to: EFSLFVHPNLYDNREECIDHQIT*WDQDCD
Trigger: ATCACAGTCCTGGTCCCACCACGTAATCTGATGATC...AATGCATTCTTCTCTGTTGTCGTAAAGATTTGGGTGAACAAACAATGAAAACTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR CCA 90 bp GAAGGAAAAGAGTCTAAGGAATCCCAGCAGGCAAATTCCAAAATGGGAGATTTTACCGCAGTGTCTTTCTaGATATCGATCATCAGATTA +
Preference number: 4 (lower is better)
Translates to: EGKESKESQQANSKMGDFTAVSF*ISIIRL
Trigger: TAATCTGATGATCGATATCCAGAAAGACACTGCGGT...AAAATCTCCCATTTTGGAATTTGCCTGCTGGGATTCCTTAGACTCTTTTCCTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR CCA 90 bp GAGTTTTCATTGTTTGTTCACCCAAATCTTTACGACAACAGAGAAGAATGCATTTCAGCATCAGCTGACTaGTCACAGTGTACATGTCTG +
Preference number: 4 (lower is better)
Translates to: EFSLFVHPNLYDNREECISASAD*SQCTCL
Trigger: CAGACATGTACACTGTGACCAGTCAGCTGATGCTGA...AATGCATTCTTCTCTGTTGTCGTAAAGATTTGGGTGAACAAACAATGAAAACTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR CCA 90 bp TACAAAATGCGAATGGGAACATATGGATATGGAGTTTCTTACACTGTAACATTGAGTAGCTATGCACTATaGCTGCCATCATGCGAGGAT +
Preference number: 4 (lower is better)
Translates to: YKMRMGTYGYGVSYTVTLSSYAL*LPSCED
Trigger: ATCCTCGCATGATGGCAGCCATAGTGCATAGCTACT...CAATGTTACAGTGTAAGAAACTCCATATCCATATGTTCCCATTCGCATTTTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000542447.6
CDS-3UTR CCA 90 bp CCCTTTGATATGATTATACTATGGTCGGAATGGGTGCTAAGGGCTCGGAATAGAAATACAAAATGCGAATaGGAACATATGGATATGGAG +
Preference number: 4 (lower is better)
Translates to: PFDMIILWSEWVLRARNRNTKCE*EHMDME
Trigger: CTCCATATCCATATGTTCCCATTCGCATTTTGTATT...TCTATTCCGAGCCCTTAGCACCCATTCCGACCATAGTATAATCATATCAAAGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000542447.6
CDS-3UTR CCA 90 bp ATACTATGGTCGGAATGGGTGCTAAGGGCTCGGAATAGAGCTGCAGATTATAAAAATACAAAATGCGAATaGGAACATATGGATATGGAG +
Preference number: 4 (lower is better)
Translates to: ILWSEWVLRARNRAADYKNTKCE*EHMDME
Trigger: CTCCATATCCATATGTTCCCATTCGCATTTTGTATT...TTTATAATCTGCAGCTCTATTCCGAGCCCTTAGCACCCATTCCGACCATAGTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000542447.6
CDS-3UTR CCA 90 bp CAAGTTCCAATATCACTGTCTCTTTATCATCTAAATAGGGCCAGTTGGACACCTTCTCAAATGAAGGAGTaGGCAACTTATCAAGATCCT +
Preference number: 4 (lower is better)
Translates to: QVPISLSLYHLNRASWTPSQMKE*ATYQDP
Trigger: AGGATCTTGATAAGTTGCCCACTCCTTCATTTGAGA...AGGTGTCCAACTGGCCCTATTTAGATGATAAAGAGACAGTGATATTGGAACTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR CCA 90 bp AATGAAAGTTTCACACAGATTCGAGTTGGAAATCCCAGCATGACAAATATCTGTTTTGTGAAAACTCTCTaGGGGAAACGAGGGCCATTT +
Preference number: 4 (lower is better)
Translates to: NESFTQIRVGNPSMTNICFVKTL*GKRGPF
Trigger: AAATGGCCCTCGTTTCCCCCAGAGAGTTTTCACAAA...ACAGATATTTGTCATGCTGGGATTTCCAACTCGAATCTGTGTGAAACTTTCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR TCA 90 bp AAAGAGTCTAAGGAATCCCAGCAGGCAAATTCCAAAATGGGAGATTTTGGAAAAGAAAAATTCAGCAACTaGAACCTGCTGTCCTTCAAA +
Preference number: 4 (lower is better)
Translates to: KESKESQQANSKMGDFGKEKFSN*NLLSFK
Trigger: TTTGAAGGACAGCAGGTTTCAGTTGCTGAATTTTTC...TTTTCCAAAATCTCCCATTTTGGAATTTGCCTGCTGGGATTCCTTAGACTCTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR TCA 90 bp AAGAGTCTAAGGAATCCCAGCAGGCAAATTCCAAAATGGGAGATTTTGGAAAAAAGTTGGACACCTCATTaGAACAAAAAGGCTGATCTA +
Preference number: 4 (lower is better)
Translates to: KSLRNPSRQIPKWEILEKSWTPH*NKKADL
Trigger: TAGATCAGCCTTTTTGTTTCAATGAGGTGTCCAACT...TTTTTCCAAAATCTCCCATTTTGGAATTTGCCTGCTGGGATTCCTTAGACTCTT
39% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR TCA 90 bp GAAGGAAAAGAGTCTAAGGAATCCCAGCAGGCAAATTCCAAAATGGGAGATTTTTCTCACCCTTTGATATaGTTATACTATGGTCGGAAT +
Preference number: 4 (lower is better)
Translates to: EGKESKESQQANSKMGDFSHPLI*LYYGRN
Trigger: ATTCCGACCATAGTATAATCATATCAAAGGGTGAGA...AAAATCTCCCATTTTGGAATTTGCCTGCTGGGATTCCTTAGACTCTTTTCCTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR TCA 90 bp AATTTGTCCACTTATATAAAAGGAACAGACCTCACCTGTCAGGTCTGTTTAGGGAATAAGACGTCGGTGTaGCTAAAGAACAAGCTTATT +
Preference number: 4 (lower is better)
Translates to: NLSTYIKGTDLTCQVCLGNKTSV*LKNKLI
Trigger: AATAAGCTTGTTCTTTAGTCACACCGACGTCTTATT...CCCTAAACAGACCTGACAGGTGAGGTCTGTTCCTTTTATATAAGTGGACAAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000542447.6
CDS-3UTR TCA 90 bp TACAAAATGCGAATGGGAACATATGGATATGGAGTTTCTTACACTGTAACATTGATACAAATTTCACCCTaGAGGAATGTGGCTGCCAGT +
Preference number: 4 (lower is better)
Translates to: YKMRMGTYGYGVSYTVTLIQISP*RNVAAS
Trigger: ACTGGCAGCCACATTCCTTCAGGGTGAAATTTGTAT...CAATGTTACAGTGTAAGAAACTCCATATCCATATGTTCCCATTCGCATTTTGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR GCA 90 bp TACAAAATGCGAATGGGAACATATGGATATGGAGTTTCTTACACTGTAACATTGCTGTTTTTCCACCTCTaGTCTGACCTATCGAGAACT +
Preference number: 4 (lower is better)
Translates to: YKMRMGTYGYGVSYTVTLLFFHL*SDLSRT
Trigger: AGTTCTCGATAGGTCAGAGCAGAGGTGGAAAAACAG...CAATGTTACAGTGTAAGAAACTCCATATCCATATGTTCCCATTCGCATTTTGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000542447.6
CDS-3UTR GCA 90 bp AAAGAGTCTAAGGAATCCCAGCAGGCAAATTCCAAAATGGGAGATTTTGGAAAAAAAAGGCCCCCATATTaGAATGGTTCTATCAAAGGT +
Preference number: 4 (lower is better)
Translates to: KESKESQQANSKMGDFGKKRPPY*NGSIKG
Trigger: ACCTTTGATAGAACCATTGCAATATGGGGGCCTTTT...TTTTCCAAAATCTCCCATTTTGGAATTTGCCTGCTGGGATTCCTTAGACTCTTT
39% GC, longest homopolymer 8 nt, total homopolymer stretches 21 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR CCA 90 bp GAGTTTTCATTGTTTGTTCACCCAAATCTTTACGACAACAGAGAAGAATGCATTGGTCTGTTTAGGGCATaGAAAAAGGAGGAGTCCTTT +
Preference number: 4 (lower is better)
Translates to: EFSLFVHPNLYDNREECIGLFRA*KKEESF
Trigger: AAAGGACTCCTCCTTTTTCCATGCCCTAAACAGACC...AATGCATTCTTCTCTGTTGTCGTAAAGATTTGGGTGAACAAACAATGAAAACTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR CCA 90 bp CAAGTTCCAATATCACTGTCTCTTTATCATCTAAATAGGGCCAGTTGGACACCTATTGGGAAAGGTGGATaGAATCATTTGGAACAGAAA +
Preference number: 4 (lower is better)
Translates to: QVPISLSLYHLNRASWTPIGKGG*NHLEQK
Trigger: TTTCTGTTCCAAATGATTCCATCCACCTTTCCCAAT...AGGTGTCCAACTGGCCCTATTTAGATGATAAAGAGACAGTGATATTGGAACTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR CCA 90 bp AATTTGTCCACTTATATAAAAGGAACAGACCTCACCTGTCAGGTCTGTTTAGGGGTAATTTTTGGCAGATaGTTCTTAAGGCTGAGGAAA +
Preference number: 4 (lower is better)
Translates to: NLSTYIKGTDLTCQVCLGVIFGR*FLRLRK
Trigger: TTTCCTCAGCCTTAAGAACCATCTGCCAAAAATTAC...CCCTAAACAGACCTGACAGGTGAGGTCTGTTCCTTTTATATAAGTGGACAAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR CCA 90 bp CAAGTTCCAATATCACTGTCTCTTTATCATCTAAATAGGGCCAGTTGGACACCTAGGATCAGTAATTTTTaGCAGATGGTTCTTAAGGCT +
Preference number: 4 (lower is better)
Translates to: QVPISLSLYHLNRASWTPRISNF*QMVLKA
Trigger: AGCCTTAAGAACCATCTGCCAAAAATTACTGATCCT...AGGTGTCCAACTGGCCCTATTTAGATGATAAAGAGACAGTGATATTGGAACTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR CCA 90 bp AATGAAAGTTTCACACAGATTCGAGTTGGAAATCCCAGCATGACAAATATCTGTCTGTTAGCTGGAGTCTaGAGTCTTACCAAACATATG +
Preference number: 4 (lower is better)
Translates to: NESFTQIRVGNPSMTNICLLAGV*SLTKHM
Trigger: CATATGTTTGGTAAGACTCCAGACTCCAGCTAACAG...ACAGATATTTGTCATGCTGGGATTTCCAACTCGAATCTGTGTGAAACTTTCATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR CCA 90 bp TACAAAATGCGAATGGGAACATATGGATATGGAGTTTCTTACACTGTAACATTGATACTGCATGCCACGTaGCTTGGAATAAGTCTGCTA +
Preference number: 4 (lower is better)
Translates to: YKMRMGTYGYGVSYTVTLILHAT*LGISLL
Trigger: TAGCAGACTTATTCCAAGCCACGTGGCATGCAGTAT...CAATGTTACAGTGTAAGAAACTCCATATCCATATGTTCCCATTCGCATTTTGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR TCA 90 bp GAGTTTTCATTGTTTGTTCACCCAAATCTTTACGACAACAGAGAAGAATGCATTGCTCCTTTGGCTTCATaGGTGAAGTATGTACCTTTA +
Preference number: 4 (lower is better)
Translates to: EFSLFVHPNLYDNREECIAPLAS*VKYVPL
Trigger: TAAAGGTACATACTTCACTCATGAAGCCAAAGGAGC...AATGCATTCTTCTCTGTTGTCGTAAAGATTTGGGTGAACAAACAATGAAAACTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR TCA 90 bp AAGAGTCTAAGGAATCCCAGCAGGCAAATTCCAAAATGGGAGATTTTGGAAAAACTAAATTCTGAACTATaGAATCTAAGCTGTGCTGGT +
Preference number: 4 (lower is better)
Translates to: KSLRNPSRQIPKWEILEKLNSEL*NLSCAG
Trigger: ACCAGCACAGCTTAGATTTCATAGTTCAGAATTTAG...TTTTTCCAAAATCTCCCATTTTGGAATTTGCCTGCTGGGATTCCTTAGACTCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR TCA 90 bp AAAGAGTCTAAGGAATCCCAGCAGGCAAATTCCAAAATGGGAGATTTTGGAAAACTAAATTCTGAACTATaGAATCTAAGCTGTGCTGGT +
Preference number: 4 (lower is better)
Translates to: KESKESQQANSKMGDFGKLNSEL*NLSCAG
Trigger: ACCAGCACAGCTTAGATTTCATAGTTCAGAATTTAG...TTTTCCAAAATCTCCCATTTTGGAATTTGCCTGCTGGGATTCCTTAGACTCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR TCA 90 bp AAAGAGTCTAAGGAATCCCAGCAGGCAAATTCCAAAATGGGAGATTTTGGAAAATTGTCAAGCCAAATCTaGAGGAATGAAAGTTTCACA +
Preference number: 4 (lower is better)
Translates to: KESKESQQANSKMGDFGKLSSQI*RNESFT
Trigger: TGTGAAACTTTCATTCCTTCAGATTTGGCTTGACAA...TTTTCCAAAATCTCCCATTTTGGAATTTGCCTGCTGGGATTCCTTAGACTCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR TCA 90 bp TGCAGGATAAACAGTATTAGAAGATGCAATCGTAACATTGCTGACTTCAGGATGTCTCACCCTTTGATATaGTTATACTATGGTCGGAAT +
Preference number: 4 (lower is better)
Translates to: CRINSIRRCNRNIADFRMSHPLI*LYYGRN
Trigger: ATTCCGACCATAGTATAATCATATCAAAGGGTGAGA...CATCCTGAAGTCAGCAATGTTACGATTGCATCTTCTAATACTGTTTATCCTGCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR TCA 90 bp AAGAGTCTAAGGAATCCCAGCAGGCAAATTCCAAAATGGGAGATTTTGGAAAAAAGGAAGAAGGCAGAATaGATTGTTAAGACACAAACT +
Preference number: 4 (lower is better)
Translates to: KSLRNPSRQIPKWEILEKRKKAE*IVKTQT
Trigger: AGTTTGTGTCTTAACAATTCATTCTGCCTTCTTCCT...TTTTTCCAAAATCTCCCATTTTGGAATTTGCCTGCTGGGATTCCTTAGACTCTT
38% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR TCA 90 bp TGCAGGATAAACAGTATTAGAAGATGCAATCGTAACATTGCTGACTTCAGGATGTCTAGTGTGTGCTTTTaGTCCTTATTCTATCTCTCT +
Preference number: 4 (lower is better)
Translates to: CRINSIRRCNRNIADFRMSSVCF*SLFYLS
Trigger: AGAGAGATAGAATAAGGATCAAAAGCACACACTAGA...CATCCTGAAGTCAGCAATGTTACGATTGCATCTTCTAATACTGTTTATCCTGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR TCA 90 bp AAAGAGTCTAAGGAATCCCAGCAGGCAAATTCCAAAATGGGAGATTTTGGAAAATCTAGTGTGTGCTTTTaGTCCTTATTCTATCTCTCT +
Preference number: 4 (lower is better)
Translates to: KESKESQQANSKMGDFGKSSVCF*SLFYLS
Trigger: AGAGAGATAGAATAAGGATCAAAAGCACACACTAGA...TTTTCCAAAATCTCCCATTTTGGAATTTGCCTGCTGGGATTCCTTAGACTCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR GCA 90 bp GAAGGAAAAGAGTCTAAGGAATCCCAGCAGGCAAATTCCAAAATGGGAGATTTTCACAACAGACGAACTTaGTTTTTCCTACAAATTAGT +
Preference number: 4 (lower is better)
Translates to: EGKESKESQQANSKMGDFHNRRT*FFLQIS
Trigger: ACTAATTTGTAGGAAAAAGCAAGTTCGTCTGTTGTG...AAAATCTCCCATTTTGGAATTTGCCTGCTGGGATTCCTTAGACTCTTTTCCTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR GCA 90 bp AATGAAAGTTTCACACAGATTCGAGTTGGAAATCCCAGCATGACAAATATCTGTAAAAGGCCCCCATATTaGAATGGTTCTATCAAAGGT +
Preference number: 4 (lower is better)
Translates to: NESFTQIRVGNPSMTNICKRPPY*NGSIKG
Trigger: ACCTTTGATAGAACCATTGCAATATGGGGGCCTTTT...ACAGATATTTGTCATGCTGGGATTTCCAACTCGAATCTGTGTGAAACTTTCATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR GCA 90 bp AATGAAAGTTTCACACAGATTCGAGTTGGAAATCCCAGCATGACAAATATCTGTTTGCAACACTATAGCTaGCCTCATCACTTTATTCTG +
Preference number: 4 (lower is better)
Translates to: NESFTQIRVGNPSMTNICLQHYS*PHHFIL
Trigger: CAGAATAAAGTGATGAGGGCAGCTATAGTGTTGCAA...ACAGATATTTGTCATGCTGGGATTTCCAACTCGAATCTGTGTGAAACTTTCATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR CCA 90 bp AAGAGTCTAAGGAATCCCAGCAGGCAAATTCCAAAATGGGAGATTTTGGAAAAAATTGGGAAAGGTGGATaGAATCATTTGGAACAGAAA +
Preference number: 4 (lower is better)
Translates to: KSLRNPSRQIPKWEILEKIGKGG*NHLEQK
Trigger: TTTCTGTTCCAAATGATTCCATCCACCTTTCCCAAT...TTTTTCCAAAATCTCCCATTTTGGAATTTGCCTGCTGGGATTCCTTAGACTCTT
38% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR CCA 90 bp AAGAGTCTAAGGAATCCCAGCAGGCAAATTCCAAAATGGGAGATTTTGGAAAAAGTAATTTTTGGCAGATaGTTCTTAAGGCTGAGGAAA +
Preference number: 4 (lower is better)
Translates to: KSLRNPSRQIPKWEILEKVIFGR*FLRLRK
Trigger: TTTCCTCAGCCTTAAGAACCATCTGCCAAAAATTAC...TTTTTCCAAAATCTCCCATTTTGGAATTTGCCTGCTGGGATTCCTTAGACTCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR CCA 90 bp TGCAGGATAAACAGTATTAGAAGATGCAATCGTAACATTGCTGACTTCAGGATGAAGGGATGTTCATTGTaGCTTTTTGTCTTGGTTAAG +
Preference number: 4 (lower is better)
Translates to: CRINSIRRCNRNIADFRMKGCSL*LFVLVK
Trigger: CTTAACCAAGACAAAAAGCCACAATGAACATCCCTT...CATCCTGAAGTCAGCAATGTTACGATTGCATCTTCTAATACTGTTTATCCTGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR CCA 90 bp GAGTTTTCATTGTTTGTTCACCCAAATCTTTACGACAACAGAGAAGAATGCATTCATTTGCATACCCTGTaGAGCTCAAAAGGCAAATGT +
Preference number: 4 (lower is better)
Translates to: EFSLFVHPNLYDNREECIHLHTL*SSKGKC
Trigger: ACATTTGCCTTTTGAGCTCCACAGGGTATGCAAATG...AATGCATTCTTCTCTGTTGTCGTAAAGATTTGGGTGAACAAACAATGAAAACTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR CCA 90 bp TACAAAATGCGAATGGGAACATATGGATATGGAGTTTCTTACACTGTAACATTGCTGATACTATTCCAGTaGGTCCTTGAGAATGATAGG +
Preference number: 4 (lower is better)
Translates to: YKMRMGTYGYGVSYTVTLLILFQ*VLENDR
Trigger: CCTATCATTCTCAAGGACCCACTGGAATAGTATCAG...CAATGTTACAGTGTAAGAAACTCCATATCCATATGTTCCCATTCGCATTTTGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR TCA 90 bp GAGTTTTCATTGTTTGTTCACCCAAATCTTTACGACAACAGAGAAGAATGCATTCTTTGGCTTCATGAGTaGAGTATGTACCTTTATGTC +
Preference number: 4 (lower is better)
Translates to: EFSLFVHPNLYDNREECILWLHE*SMYLYV
Trigger: GACATAAAGGTACATACTTCACTCATGAAGCCAAAG...AATGCATTCTTCTCTGTTGTCGTAAAGATTTGGGTGAACAAACAATGAAAACTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR TCA 90 bp GAGTTTTCATTGTTTGTTCACCCAAATCTTTACGACAACAGAGAAGAATGCATTCCAAATCTGAAGGAATaGAAGTTTCACACAGATTCG +
Preference number: 4 (lower is better)
Translates to: EFSLFVHPNLYDNREECIPNLKE*KFHTDS
Trigger: CGAATCTGTGTGAAACTTTCATTCCTTCAGATTTGG...AATGCATTCTTCTCTGTTGTCGTAAAGATTTGGGTGAACAAACAATGAAAACTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR TCA 90 bp TACAAAATGCGAATGGGAACATATGGATATGGAGTTTCTTACACTGTAACATTGTTTGCCTCTATCCTGTaGCTGACATGTAATGAACAA +
Preference number: 4 (lower is better)
Translates to: YKMRMGTYGYGVSYTVTLFASIL*LTCNEQ
Trigger: TTGTTCATTACATGTCAGTCACAGGATAGAGGCAAA...CAATGTTACAGTGTAAGAAACTCCATATCCATATGTTCCCATTCGCATTTTGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR GCA 90 bp AAAGAGTCTAAGGAATCCCAGCAGGCAAATTCCAAAATGGGAGATTTTGGAAAAATGAAATCTAAGCTGTaGTGGTTCTCCTTTTATGAA +
Preference number: 4 (lower is better)
Translates to: KESKESQQANSKMGDFGKMKSKL*WFSFYE
Trigger: TTCATAAAAGGAGAACCAGCACAGCTTAGATTTCAT...TTTTCCAAAATCTCCCATTTTGGAATTTGCCTGCTGGGATTCCTTAGACTCTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR GCA 90 bp GAGTTTTCATTGTTTGTTCACCCAAATCTTTACGACAACAGAGAAGAATGCATTAAAAGGCCCCCATATTaGAATGGTTCTATCAAAGGT +
Preference number: 4 (lower is better)
Translates to: EFSLFVHPNLYDNREECIKRPPY*NGSIKG
Trigger: ACCTTTGATAGAACCATTGCAATATGGGGGCCTTTT...AATGCATTCTTCTCTGTTGTCGTAAAGATTTGGGTGAACAAACAATGAAAACTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR GCA 90 bp AATGAAAGTTTCACACAGATTCGAGTTGGAAATCCCAGCATGACAAATATCTGTTTACATCAGGAACACTaGACTACTGTACACTTTTCA +
Preference number: 4 (lower is better)
Translates to: NESFTQIRVGNPSMTNICLHQEH*TTVHFS
Trigger: TGAAAAGTGTACAGTAGTGCAGTGTTCCTGATGTAA...ACAGATATTTGTCATGCTGGGATTTCCAACTCGAATCTGTGTGAAACTTTCATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000542447.6
CDS-3UTR GCA 90 bp TACAAAATGCGAATGGGAACATATGGATATGGAGTTTCTTACACTGTAACATTGTCTGGAGCTTACCTTTaGTTTTCCTATGGAACTTTC +
Preference number: 4 (lower is better)
Translates to: YKMRMGTYGYGVSYTVTLSGAYL*FSYGTF
Trigger: GAAAGTTCCATAGGAAAAGCAAAGGTAAGCTCCAGA...CAATGTTACAGTGTAAGAAACTCCATATCCATATGTTCCCATTCGCATTTTGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR CCA 90 bp GAGTTTTCATTGTTTGTTCACCCAAATCTTTACGACAACAGAGAAGAATGCATTGATATGATTATACTATaGTCGGAATGGGTGCTAAGG +
Preference number: 4 (lower is better)
Translates to: EFSLFVHPNLYDNREECIDMIIL*SEWVLR
Trigger: CCTTAGCACCCATTCCGACCATAGTATAATCATATC...AATGCATTCTTCTCTGTTGTCGTAAAGATTTGGGTGAACAAACAATGAAAACTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR TCA 90 bp GAGTTTTCATTGTTTGTTCACCCAAATCTTTACGACAACAGAGAAGAATGCATTAATAAGACGTCGGTGTaGCTAAAGAACAAGCTTATT +
Preference number: 4 (lower is better)
Translates to: EFSLFVHPNLYDNREECINKTSV*LKNKLI
Trigger: AATAAGCTTGTTCTTTAGTCACACCGACGTCTTATT...AATGCATTCTTCTCTGTTGTCGTAAAGATTTGGGTGAACAAACAATGAAAACTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000542447.6
CDS-3UTR TCA 90 bp TACAAAATGCGAATGGGAACATATGGATATGGAGTTTCTTACACTGTAACATTGACTTTAATATGGTATTaGCCTACAAGGTCATGGATG +
Preference number: 4 (lower is better)
Translates to: YKMRMGTYGYGVSYTVTLTLIWY*PTRSWM
Trigger: CATCCATGACCTTGTAGGTCAATACCATATTAAAGT...CAATGTTACAGTGTAAGAAACTCCATATCCATATGTTCCCATTCGCATTTTGTA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR TCA 90 bp GAGTTTTCATTGTTTGTTCACCCAAATCTTTACGACAACAGAGAAGAATGCATTACTTTAATATGGTATTaGCCTACAAGGTCATGGATG +
Preference number: 4 (lower is better)
Translates to: EFSLFVHPNLYDNREECITLIWY*PTRSWM
Trigger: CATCCATGACCTTGTAGGTCAATACCATATTAAAGT...AATGCATTCTTCTCTGTTGTCGTAAAGATTTGGGTGAACAAACAATGAAAACTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR GCA 90 bp AATGAAAGTTTCACACAGATTCGAGTTGGAAATCCCAGCATGACAAATATCTGTCACAACAGACGAACTTaGTTTTTCCTACAAATTAGT +
Preference number: 4 (lower is better)
Translates to: NESFTQIRVGNPSMTNICHNRRT*FFLQIS
Trigger: ACTAATTTGTAGGAAAAAGCAAGTTCGTCTGTTGTG...ACAGATATTTGTCATGCTGGGATTTCCAACTCGAATCTGTGTGAAACTTTCATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR CCA 90 bp TACAAAATGCGAATGGGAACATATGGATATGGAGTTTCTTACACTGTAACATTGATTGGGAAAGGTGGATaGAATCATTTGGAACAGAAA +
Preference number: 4 (lower is better)
Translates to: YKMRMGTYGYGVSYTVTLIGKGG*NHLEQK
Trigger: TTTCTGTTCCAAATGATTCCATCCACCTTTCCCAAT...CAATGTTACAGTGTAAGAAACTCCATATCCATATGTTCCCATTCGCATTTTGTA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000542447.6
CDS-3UTR CCA 90 bp TACAAAATGCGAATGGGAACATATGGATATGGAGTTTCTTACACTGTAACATTGGTAATTTTTGGCAGATaGTTCTTAAGGCTGAGGAAA +
Preference number: 4 (lower is better)
Translates to: YKMRMGTYGYGVSYTVTLVIFGR*FLRLRK
Trigger: TTTCCTCAGCCTTAAGAACCATCTGCCAAAAATTAC...CAATGTTACAGTGTAAGAAACTCCATATCCATATGTTCCCATTCGCATTTTGTA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000542447.6
CDS-3UTR CCA 90 bp TACAAAATGCGAATGGGAACATATGGATATGGAGTTTCTTACACTGTAACATTGAGGATCAGTAATTTTTaGCAGATGGTTCTTAAGGCT +
Preference number: 4 (lower is better)
Translates to: YKMRMGTYGYGVSYTVTLRISNF*QMVLKA
Trigger: AGCCTTAAGAACCATCTGCCAAAAATTACTGATCCT...CAATGTTACAGTGTAAGAAACTCCATATCCATATGTTCCCATTCGCATTTTGTA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000542447.6
CDS-3UTR CCA 90 bp TACAAAATGCGAATGGGAACATATGGATATGGAGTTTCTTACACTGTAACATTGTTCAAAACAGAAAGATaGGAGGTCCCAAAAATGAGA +
Preference number: 4 (lower is better)
Translates to: YKMRMGTYGYGVSYTVTLFKTER*EVPKMR
Trigger: TCTCATTTTTGGGACCTCCCATCTTTCTGTTTTGAA...CAATGTTACAGTGTAAGAAACTCCATATCCATATGTTCCCATTCGCATTTTGTA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000542447.6
CDS-3UTR CCA 90 bp GAGTTTTCATTGTTTGTTCACCCAAATCTTTACGACAACAGAGAAGAATGCATTGGGAACATATGGATATaGAGTTTCTTACACTGTAAC +
Preference number: 4 (lower is better)
Translates to: EFSLFVHPNLYDNREECIGNIWI*SFLHCN
Trigger: GTTACAGTGTAAGAAACTCCATATCCATATGTTCCC...AATGCATTCTTCTCTGTTGTCGTAAAGATTTGGGTGAACAAACAATGAAAACTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000542447.6
3UTR CAA 72 bp AATATTCAGCAACCATTAAGGGATTTAAATATTTGCTaGCTATTAAAGGCCTGCATTAGGCTCTTCCAACAC +
Preference number: 4 (lower is better)
Translates to: NIQQPLRDLNIC*LLKACIRLFQH
Trigger: GTGTTGGAAGAGCCTAATGCAGGCCTTTAATAGCAAGCAAATATTTAAATCCCTTAATGGTTGCTGAATATT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS GCA 90 bp CAGCAGAAGCCGGAGCCGGAGCCCGGGAGGCGCCGCCGCCGCCGCTaGCGCCGCACACTGGGATCCGCTCGGCAGCACTACACTCGCCAT +
Preference number: 5 (lower is better)
Translates to: QQKPEPEPGRRRRRR*RRTLGSARQHYTRH
Trigger: ATGGCGAGTGTAGTGCTGCCGAGCGGATCCCAGTGTGCGGCGGCAGCGGCGGCGGCGGCGCCTCCCGGGCTCCGGCTCCGGCTTCTGCTG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000536781.1
ENST00000537058.5
ENST00000537140.5
ENST00000540951.1
ENST00000541434.5
ENST00000542447.6
CDS GCA 90 bp CACTGGGATCCGCTCGGCAGCACTACACTCGCCATGTCGGGCACCTaGCTCAGACTGGCGGCGTTGGCTGCCTCCGGAGCCCGAGCGGAC +
Preference number: 5 (lower is better)
Translates to: HWDPLGSTTLAMSGT*LRLAALAASGARAD
Trigger: GTCCGCTCGGGCTCCGGAGGCAGCCAACGCCGCCAGTCTGAGGCAGGTGCCCGACATGGCGAGTGTAGTGCTGCCGAGCGGATCCCAGTG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537140.5
ENST00000542447.6
CDS CCA 90 bp CGCTCGGCAGCACTACACTCGCCATGTCGGGCACCTGCCTCAGACTaGCGGCGTTGGCTGCCTCCGGAGCCCGAGCGGACAGCTAATGAG +
Preference number: 5 (lower is better)
Translates to: RSAALHSPCRAPASD*RRWLPPEPERTANE
Trigger: CTCATTAGCTGTCCGCTCGGGCTCCGGAGGCAGCCAACGCCGCCAGTCTGAGGCAGGTGCCCGACATGGCGAGTGTAGTGCTGCCGAGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537140.5
ENST00000542447.6
CDS GCA 90 bp CTGCCTCCGGAGCCCGAGCGGACAGCTAATGAGATGCTAATGACATaGGCTGGAGGCGGAGTCCGGGCAGACCAATCACAGCGCCGCGAG +
Preference number: 5 (lower is better)
Translates to: LPPEPERTANEMLMT*AGGGVRADQSQRRE
Trigger: CTCGCGGCGCTGTGATTGGTCTGCCCGGACTCCGCCTCCAGCGCATGTCATTAGCATCTCATTAGCTGTCCGCTCGGGCTCCGGAGGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537140.5
ENST00000542447.6
CDS CCA 90 bp GCACTACACTCGCCATGTCGGGCACCTGCCTCAGACTGGCGGCGTTaGCTGCCTCCGGAGCCCGAGCGGACAGCTAATGAGATGCTAATG +
Preference number: 5 (lower is better)
Translates to: ALHSPCRAPASDWRR*LPPEPERTANEMLM
Trigger: CATTAGCATCTCATTAGCTGTCCGCTCGGGCTCCGGAGGCAGCCAACGCCGCCAGTCTGAGGCAGGTGCCCGACATGGCGAGTGTAGTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537140.5
ENST00000542447.6
CDS TCA 90 bp CCACCACCGCCACGACGCCACCGATCACGGCATGATCCACTGCCCTaGTCGAGCCTTCTTCACCTGCTCGGGAATCTGAGAGGTCCTCAC +
Preference number: 5 (lower is better)
Translates to: PPPPRRHRSRHDPLP*SSLLHLLGNLRGPH
Trigger: GTGAGGACCTCTCAGATTCCCGAGCAGGTGAAGAAGGCTCGATCAGGGCAGTGGATCATGCCGTGATCGGTGGCGTCGTGGCGGTGGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331581.11
ENST00000536727.5
ENST00000540852.1
ENST00000545960.5
CDS TCA 90 bp AGCATGGCGAACACCACCACCGCCACGACGCCACCGATCACGGCATaGTCCACTGCCCTGATCGAGCCTTCTTCACCTGCTCGGGAATCG +
Preference number: 5 (lower is better)
Translates to: SMANTTTATTPPITA*STALIEPSSPARES
Trigger: CGATTCCCGAGCAGGTGAAGAAGGCTCGATCAGGGCAGTGGATCATGCCGTGATCGGTGGCGTCGTGGCGGTGGTGGTGTTCGCCATGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000537058.5
ENST00000537140.5
ENST00000542447.6
ENST00000545380.5
ENST00000612235.4
ENST00000616271.4
CDS TCA 90 bp AGCATGGCGAACACCACCACCGCCACGACGCCACCGATCACGGCATaGTCCACTGCCCTGATCGAGCCTTCTTCACCTGCTCGGGAATCT +
Preference number: 5 (lower is better)
Translates to: SMANTTTATTPPITA*STALIEPSSPARES
Trigger: AGATTCCCGAGCAGGTGAAGAAGGCTCGATCAGGGCAGTGGATCATGCCGTGATCGGTGGCGTCGTGGCGGTGGTGGTGTTCGCCATGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000540852.1
ENST00000543375.5
ENST00000545960.5
ENST00000546000.1
CDS TCA 90 bp CCACCACCGCCACGACGCCACCGATCACGGCATGATCCACTGCCCTaGTCGAGCCTTCTTCACCTGCTCGGGAATCGTGAACTGCTGGTT +
Preference number: 5 (lower is better)
Translates to: PPPPRRHRSRHDPLP*SSLLHLLGNRELLV
Trigger: AACCAGCAGTTCACGATTCCCGAGCAGGTGAAGAAGGCTCGATCAGGGCAGTGGATCATGCCGTGATCGGTGGCGTCGTGGCGGTGGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537058.5
ENST00000616271.4
CDS GCA 90 bp GAACACCACCACCGCCACGACGCCACCGATCACGGCATGATCCACTaGCCTGATCGAGCCTTCTTCACCTGCTCGGGAATCGTGAACTGC +
Preference number: 5 (lower is better)
Translates to: EHHHRHDATDHGMIH*PDRAFFTCSGIVNC
Trigger: GCAGTTCACGATTCCCGAGCAGGTGAAGAAGGCTCGATCAGGGCAGTGGATCATGCCGTGATCGGTGGCGTCGTGGCGGTGGTGGTGTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537058.5
ENST00000616271.4
CDS GCA 90 bp ACTTCTAGATACCGCTGGGTCTGCAGGTTTCCAGTGACCGCAGGGTaGTCCACCTGGCAGATCACTGGGACCCCATCGTCCTCCTTGTGC +
Preference number: 5 (lower is better)
Translates to: TSRYRWVCRFPVTAG*STWQITGTPSSSLC
Trigger: GCACAAGGAGGACGATGGGGTCCCAGTGATCTGCCAGGTGGAGCACCCTGCGGTCACTGGAAACCTGCAGACCCAGCGGTATCTAGAAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000537140.5
ENST00000541434.5
ENST00000542447.6
ENST00000542450.5
ENST00000545380.5
ENST00000612235.4
ENST00000616271.4
CDS CCA 90 bp CTGCAGGTTTCCAGTGACCGCAGGGTGCTCCACCTGGCAGATCACTaGGACCCCATCGTCCTCCTTGTGCACCTTCAGCATCAGCTGACT +
Preference number: 5 (lower is better)
Translates to: LQVSSDRRVLHLADH*DPIVLLVHLQHQLT
Trigger: AGTCAGCTGATGCTGAAGGTGCACAAGGAGGACGATGGGGTCCCAGTGATCTGCCAGGTGGAGCACCCTGCGGTCACTGGAAACCTGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000537140.5
ENST00000541434.5
ENST00000542447.6
ENST00000542450.5
ENST00000545380.5
ENST00000612235.4
ENST00000616271.4
CDS TCA 90 bp CCACCACCGCCACGACGCCACCGATCACGGCATGATCCACTGCCCTaGTCGAGCCTTCTTCACCTGCTCGGGAATCGTATACATACAGCA +
Preference number: 5 (lower is better)
Translates to: PPPPRRHRSRHDPLP*SSLLHLLGNRIHTA
Trigger: TGCTGTATGTATACGATTCCCGAGCAGGTGAAGAAGGCTCGATCAGGGCAGTGGATCATGCCGTGATCGGTGGCGTCGTGGCGGTGGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000537140.5
ENST00000542447.6
ENST00000545380.5
ENST00000612235.4
CDS TCA 90 bp CCACCACCGCCACGACGCCACCGATCACGGCATGATCCACTGCCCTaGTCGAGCCTTCTTCACCTGCTCGGGAATCTAAGCAGCATACAT +
Preference number: 5 (lower is better)
Translates to: PPPPRRHRSRHDPLP*SSLLHLLGNLSSIH
Trigger: ATGTATGCTGCTTAGATTCCCGAGCAGGTGAAGAAGGCTCGATCAGGGCAGTGGATCATGCCGTGATCGGTGGCGTCGTGGCGGTGGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543375.5
CDS GCA 90 bp GAACACCACCACCGCCACGACGCCACCGATCACGGCATGATCCACTaGCCTGATCGAGCCTTCTTCACCTGCTCGGGAATCTGTGATGAT +
Preference number: 5 (lower is better)
Translates to: EHHHRHDATDHGMIH*PDRAFFTCSGICDD
Trigger: ATCATCACAGATTCCCGAGCAGGTGAAGAAGGCTCGATCAGGGCAGTGGATCATGCCGTGATCGGTGGCGTCGTGGCGGTGGTGGTGTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452722.7
CDS GCA 90 bp GAACACCACCACCGCCACGACGCCACCGATCACGGCATGATCCACTaGCCTGATCGAGCCTTCTTCACCTGCTCGGGAATCGTATACATA +
Preference number: 5 (lower is better)
Translates to: EHHHRHDATDHGMIH*PDRAFFTCSGIVYI
Trigger: TATGTATACGATTCCCGAGCAGGTGAAGAAGGCTCGATCAGGGCAGTGGATCATGCCGTGATCGGTGGCGTCGTGGCGGTGGTGGTGTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000537140.5
ENST00000542447.6
ENST00000545380.5
ENST00000612235.4
CDS TCA 90 bp GCTTATACTGTACTTCTAGATACCGCTGGGTCTGCAGGTTTCCAGTaGCCGCAGGGTGCTCCACCTGGCAGATCACTGGGACCCCATCGT +
Preference number: 5 (lower is better)
Translates to: AYTVLLDTAGSAGFQ*PQGAPPGRSLGPHR
Trigger: ACGATGGGGTCCCAGTGATCTGCCAGGTGGAGCACCCTGCGGTCACTGGAAACCTGCAGACCCAGCGGTATCTAGAAGTACAGTATAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000537140.5
ENST00000541434.5
ENST00000542447.6
ENST00000542450.5
ENST00000545380.5
ENST00000612235.4
ENST00000616271.4
CDS TCA 90 bp CCACCACCGCCACGACGCCACCGATCACGGCATGATCCACTGCCCTaGTCGAGCCTTCTTCACCTGCTCGGGAATCTGTTAAAATCAGAA +
Preference number: 5 (lower is better)
Translates to: PPPPRRHRSRHDPLP*SSLLHLLGNLLKSE
Trigger: TTCTGATTTTAACAGATTCCCGAGCAGGTGAAGAAGGCTCGATCAGGGCAGTGGATCATGCCGTGATCGGTGGCGTCGTGGCGGTGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546000.1
CDS GCA 90 bp GCAACCTCTCCCTCGATCACTGTCACGTCTTTCGTAAACAGATTCTaGCCATCACCTGTGGGGATCAGTGCCGCGGCGGAGAAGAGCAAC +
Preference number: 5 (lower is better)
Translates to: ATSPSITVTSFVNRF*PSPVGISAAAEKSN
Trigger: GTTGCTCTTCTCCGCCGCGGCACTGATCCCCACAGGTGATGGGCAGAATCTGTTTACGAAAGACGTGACAGTGATCGAGGGAGAGGTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000537140.5
ENST00000541434.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR CAA 90 bp ATGACTGTGAGCCTGTGCACGTCTGGAGGGCAGCTGAAGTCCCGGGCCCAGAGATGTGACACACCTCACTaGCAGATAACCCTGTACAGT +
Preference number: 5 (lower is better)
Translates to: MTVSLCTSGGQLKSRAQRCDTPH*QITLYS
Trigger: ACTGTACAGGGTTATCTGCAAGTGAGGTGTGTCACA...TCTCTGGGCCCGGGACTTCAGCTGCCCTCCAGACGTGCACAGGCTCACAGTCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR CAA 90 bp AGTGTGAGAACAATACCAGCCCTTCTTTTGTACCTCCTGCCTTTGTCAAGCCAACTCAGACTGGCGGCGTaGGCTGCCTCCGGAGCCCGA +
Preference number: 5 (lower is better)
Translates to: SVRTIPALLLYLLPLSSQLRLAA*AASGAR
Trigger: TCGGGCTCCGGAGGCAGCCAACGCCGCCAGTCTGAG...TTGGCTTGACAAAGGCAGGAGGTACAAAAGAAGGGCTGGTATTGTTCTCACACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542447.6
CDS CCA 90 bp CTGGGACCCCATCGTCCTCCTTGTGCACCTTCAGCATCAGCTGACTaGTCACAGTGTACATGTCTGACCACTCTTCCACCTCCGATTTGC +
Preference number: 5 (lower is better)
Translates to: LGPHRPPCAPSASAD*SQCTCLTTLPPPIC
Trigger: GCAAATCGGAGGTGGAAGAGTGGTCAGACATGTACACTGTGACCAGTCAGCTGATGCTGAAGGTGCACAAGGAGGACGATGGGGTCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000537140.5
ENST00000541434.5
ENST00000542447.6
ENST00000542450.5
ENST00000543540.5
ENST00000545380.5
ENST00000612235.4
ENST00000616271.4
CDS-3UTR CAA 90 bp ATGGAAAAAGGAGGAGTCCTTTCTGCCCCAAACCTTTCTGGACAGCGTAGGGTAACTCCCTACTGCTCCTaGCCCTCTGGCAGAGGCTGG +
Preference number: 5 (lower is better)
Translates to: MEKGGVLSAPNLSGQRRVTPYCS*PSGRGW
Trigger: CCAGCCTCTGCCAGAGGGCAAGGAGCAGTAGGGAGT...TACCCTACGCTGTCCAGAAAGGTTTGGGGCAGAAAGGACTCCTCCTTTTTCCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS TCA 90 bp ATCACTGGGACCCCATCGTCCTCCTTGTGCACCTTCAGCATCAGCTaGCTGGTCACAGTGTACATGTCTGACCACTCTTCCACCTCCGAT +
Preference number: 5 (lower is better)
Translates to: ITGTPSSSLCTFSIS*LVTVYMSDHSSTSD
Trigger: ATCGGAGGTGGAAGAGTGGTCAGACATGTACACTGTGACCAGTCAGCTGATGCTGAAGGTGCACAAGGAGGACGATGGGGTCCCAGTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000537140.5
ENST00000541434.5
ENST00000542447.6
ENST00000542450.5
ENST00000543540.5
ENST00000545380.5
ENST00000612235.4
ENST00000616271.4
CDS-3UTR CAA 90 bp AGGAACAGACCTCACCTGTCAGGTCTGTTTAGGGCATGGAAAAAGGAGGAGTCCACCCCATCGTCCTCCTaGTGCACCTTCAGCATCAGC +
Preference number: 5 (lower is better)
Translates to: RNRPHLSGLFRAWKKEESTPSSS*CTFSIS
Trigger: GCTGATGCTGAAGGTGCACAAGGAGGACGATGGGGT...GGACTCCTCCTTTTTCCATGCCCTAAACAGACCTGACAGGTGAGGTCTGTTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR CAA 90 bp CTGGGGTCCCAGCTCTTTGTGAAGCTGTCTAGGGACTCACCAGCCTTCACTGATGCCATAGCAGTGCAGTaGACTTCAATCTCCTCACCT +
Preference number: 5 (lower is better)
Translates to: LGSQLFVKLSRDSPAFTDAIAVQ*TSISSP
Trigger: AGGTGAGGAGATTGAAGTCAACTGCACTGCTATGGC...ATCAGTGAAGGCTGGTGAGTCCCTAGACAGCTTCACAAAGAGCTGGGACCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR CAA 90 bp ATGGAAAAAGGAGGAGTCCTTTCTGCCCCAAACCTTTCTGGACAGCGTAGGGTAACCCCATCGTCCTCCTaGTGCACCTTCAGCATCAGC +
Preference number: 5 (lower is better)
Translates to: MEKGGVLSAPNLSGQRRVTPSSS*CTFSIS
Trigger: GCTGATGCTGAAGGTGCACAAGGAGGACGATGGGGT...TACCCTACGCTGTCCAGAAAGGTTTGGGGCAGAAAGGACTCCTCCTTTTTCCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR CAA 90 bp ACTCTCTGGGGGAAACGAGGGCCATTTTCACTCTCGTACGCACTCTTCTCAAATACCCCATCGTCCTCCTaGTGCACCTTCAGCATCAGC +
Preference number: 5 (lower is better)
Translates to: TLWGKRGPFSLSYALFSNTPSSS*CTFSIS
Trigger: GCTGATGCTGAAGGTGCACAAGGAGGACGATGGGGT...ATTTGAGAAGAGTGCGTACGAGAGTGAAAATGGCCCTCGTTTCCCCCAGAGAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR CAA 90 bp CTGGGGTCCCAGCTCTTTGTGAAGCTGTCTAGGGACTCACCAGCCTTCACTGATAGACAGTACGGCGTGTaGAGGCATTTCATCATCGAC +
Preference number: 5 (lower is better)
Translates to: LGSQLFVKLSRDSPAFTDRQYGV*RHFIID
Trigger: GTCGATGATGAAATGCCTCAACACGCCGTACTGTCT...ATCAGTGAAGGCTGGTGAGTCCCTAGACAGCTTCACAAAGAGCTGGGACCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR CAA 90 bp TTTGCATACCCTGTGGAGCTCAAAAGGCAAATGTACAGCAGTCACCACCTCCTGGGCCCAGAGAACCGGTaGATTTGCCCCTCAGTAGTG +
Preference number: 5 (lower is better)
Translates to: FAYPVELKRQMYSSHHLLGPENR*ICPSVV
Trigger: CACTACTGAGGGGCAAATCAACCGGTTCTCTGGGCC...CAGGAGGTGGTGACTGCTGTACATTTGCCTTTTGAGCTCCACAGGGTATGCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR CAA 90 bp CAGATTACGTGGTGGGACCAGGACTGTGATGGTGGTGTAACTTTCCTGTGGGGGGAGTCGTCACTCTTATaGACTTGGCAACTGATGGTC +
Preference number: 5 (lower is better)
Translates to: QITWWDQDCDGGVTFLWGESSLL*TWQLMV
Trigger: GACCATCAGTTGCCAAGTCAATAAGAGTGACGACTC...CCCCCACAGGAAAGTTACACCACCATCACAGTCCTGGTCCCACCACGTAATCTG
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000540951.1
CDS-3UTR CAA 90 bp AGGAACAGACCTCACCTGTCAGGTCTGTTTAGGGCATGGAAAAAGGAGGAGTCCGCCATAGCAGTGCAGTaGACTTCAATCTCCTCACCT +
Preference number: 5 (lower is better)
Translates to: RNRPHLSGLFRAWKKEESAIAVQ*TSISSP
Trigger: AGGTGAGGAGATTGAAGTCAACTGCACTGCTATGGC...GGACTCCTCCTTTTTCCATGCCCTAAACAGACCTGACAGGTGAGGTCTGTTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR CAA 90 bp TCCTCTACCTTTTCCCGAGGCTCCCCATCTAAGATATGTTCAAGGTCACTGATTATAGTCGTGGCTGGCTaGCTGGCCATAGCAGTGCAG +
Preference number: 5 (lower is better)
Translates to: SSTFSRGSPSKICSRSLIIVVAG*LAIAVQ
Trigger: CTGCACTGCTATGGCCAGCAAGCCAGCCACGACTAT...AATCAGTGACCTTGAACATATCTTAGATGGGGAGCCTCGGGAAAAGGTAGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR CAA 90 bp TTCTCACCCTTTGATATGATTATACTATGGTCGGAATGGGTGCTAAGGGCTCGGATAGTCGTGGCTGGCTaGCTGGCCATAGCAGTGCAG +
Preference number: 5 (lower is better)
Translates to: FSPFDMIILWSEWVLRARIVVAG*LAIAVQ
Trigger: CTGCACTGCTATGGCCAGCAAGCCAGCCACGACTAT...CCGAGCCCTTAGCACCCATTCCGACCATAGTATAATCATATCAAAGGGTGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR CAA 90 bp TTCTCACCCTTTGATATGATTATACTATGGTCGGAATGGGTGCTAAGGGCTCGGACCCCATCGTCCTCCTaGTGCACCTTCAGCATCAGC +
Preference number: 5 (lower is better)
Translates to: FSPFDMIILWSEWVLRARTPSSS*CTFSIS
Trigger: GCTGATGCTGAAGGTGCACAAGGAGGACGATGGGGT...CCGAGCCCTTAGCACCCATTCCGACCATAGTATAATCATATCAAAGGGTGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR CAA 90 bp TGTTTTTCCACCTCTGCTCTGACCTATCGAGAACTGAGAGCGACAGCAGACCAGAGACAGTACGGCGTGTaGAGGCATTTCATCATCGAC +
Preference number: 5 (lower is better)
Translates to: CFSTSALTYRELRATADQRQYGV*RHFIID
Trigger: GTCGATGATGAAATGCCTCAACACGCCGTACTGTCT...CTGGTCTGCTGTCGCTCTCAGTTCTCGATAGGTCAGAGCAGAGGTGGAAAAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR CAA 90 bp GACTCCTCTACCTTTTCCCGAGGCTCCCCATCTAAGATATGTTCAAGGTCACTGTTATTGATGAACAGGTaGGGCCCAGACAGTACGGCG +
Preference number: 5 (lower is better)
Translates to: DSSTFSRGSPSKICSRSLLLMNR*GPDSTA
Trigger: CGCCGTACTGTCTGGGCCCAACCTGTTCATCAATAA...CAGTGACCTTGAACATATCTTAGATGGGGAGCCTCGGGAAAAGGTAGAGGAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR CAA 90 bp AGGAACAGACCTCACCTGTCAGGTCTGTTTAGGGCATGGAAAAAGGAGGAGTCCAGAGAACCGGTTGATTaGCCCCTCAGTAGTGGTTCT +
Preference number: 5 (lower is better)
Translates to: RNRPHLSGLFRAWKKEESREPVD*PLSSGS
Trigger: AGAACCACTACTGAGGGGCAAATCAACCGGTTCTCT...GGACTCCTCCTTTTTCCATGCCCTAAACAGACCTGACAGGTGAGGTCTGTTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS CCA 90 bp GTGCAGTTGACTTCAATCTCCTCACCTTCCACCGCAGTGTCTTTCTaGATATCGATCATCAGATTACGTGGTGGGACCAGGACTGTGATG +
Preference number: 5 (lower is better)
Translates to: VQLTSISSPSTAVSF*ISIIRLRGGTRTVM
Trigger: CATCACAGTCCTGGTCCCACCACGTAATCTGATGATCGATATCCAGAAAGACACTGCGGTGGAAGGTGAGGAGATTGAAGTCAACTGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000537140.5
ENST00000541434.5
ENST00000542447.6
ENST00000542450.5
ENST00000543249.1
ENST00000543540.5
ENST00000545094.5
ENST00000545380.5
ENST00000612235.4
ENST00000616271.4
CDS CCA 90 bp GCTCGGGAATCTAAGCAGCATACATCTGATCACTTGGCCATATTATaGAAACTCTTACTTCCACCACCAGCCATGAGTTCAGACGCCCCC +
Preference number: 5 (lower is better)
Translates to: ARESKQHTSDHLAIL*KLLLPPPAMSSDAP
Trigger: GGGGGCGTCTGAACTCATGGCTGGTGGTGGAAGTAAGAGTTTCCATAATATGGCCAAGTGATCAGATGTATGCTGCTTAGATTCCCGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543375.5
CDS-3UTR CAA 90 bp TTTGCATACCCTGTGGAGCTCAAAAGGCAAATGTACAGCAGTCACCACCTCCTGGCCATAGCAGTGCAGTaGACTTCAATCTCCTCACCT +
Preference number: 5 (lower is better)
Translates to: FAYPVELKRQMYSSHHLLAIAVQ*TSISSP
Trigger: AGGTGAGGAGATTGAAGTCAACTGCACTGCTATGGC...CAGGAGGTGGTGACTGCTGTACATTTGCCTTTTGAGCTCCACAGGGTATGCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR CAA 90 bp CAATGTGTGGGGCCTACACTTTGCAATCTACCTGAGACGGAAAACACCAATCGCGCCATAGCAGTGCAGTaGACTTCAATCTCCTCACCT +
Preference number: 5 (lower is better)
Translates to: QCVGPTLCNLPETENTNRAIAVQ*TSISSP
Trigger: AGGTGAGGAGATTGAAGTCAACTGCACTGCTATGGC...GCGATTGGTGTTTTCCGTCTCAGGTAGATTGCAAAGTGTAGGCCCCACACATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000542447.6
CDS-3UTR CAA 90 bp CATTGTGACACACCTCACTTGCAGATAACCCTGTACAGTAATGTAGTTCCACAGATAGTCGTGGCTGGCTaGCTGGCCATAGCAGTGCAG +
Preference number: 5 (lower is better)
Translates to: HCDTPHLQITLYSNVVPQIVVAG*LAIAVQ
Trigger: CTGCACTGCTATGGCCAGCAAGCCAGCCACGACTAT...CTGTGGAACTACATTACTGTACAGGGTTATCTGCAAGTGAGGTGTGTCACAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR CAA 90 bp ACTGAAGTATCGAGTCCTCTGCCCGGACTTTTCAGTACAGCCACAAGACCCATCTCTTCCACCTCCGATTaGCCTTTTAGCTCTGTGTTC +
Preference number: 5 (lower is better)
Translates to: TEVSSPLPGLFSTATRPISSTSD*PFSSVF
Trigger: GAACACAGAGCTAAAAGGCAAATCGGAGGTGGAAGA...GATGGGTCTTGTGGCTGTACTGAAAAGTCCGGGCAGAGGACTCGATACTTCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR CAA 90 bp AGGAACAGACCTCACCTGTCAGGTCTGTTTAGGGCATGGAAAAAGGAGGAGTCCTGTCCTCCTTCTGCATaGATTATAGCTGTGTCTGCG +
Preference number: 5 (lower is better)
Translates to: RNRPHLSGLFRAWKKEESCPPSA*IIAVSA
Trigger: CGCAGACACAGCTATAATCAATGCAGAAGGAGGACA...GGACTCCTCCTTTTTCCATGCCCTAAACAGACCTGACAGGTGAGGTCTGTTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR CAA 90 bp ACTCTCTGGGGGAAACGAGGGCCATTTTCACTCTCGTACGCACTCTTCTCAAATACCCTGCACACGGAATaGCTTTCTTCTCCCCATACA +
Preference number: 5 (lower is better)
Translates to: TLWGKRGPFSLSYALFSNTLHTE*LSSPHT
Trigger: TGTATGGGGAGAAGAAAGCAATTCCGTGTGCAGGGT...ATTTGAGAAGAGTGCGTACGAGAGTGAAAATGGCCCTCGTTTCCCCCAGAGAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR CAA 90 bp ACTGAAGTATCGAGTCCTCTGCCCGGACTTTTCAGTACAGCCACAAGACCCATCACCTCAGGGTTCCAGTaGATGTATTTGGAGAATGCC +
Preference number: 5 (lower is better)
Translates to: TEVSSPLPGLFSTATRPITSGFQ*MYLENA
Trigger: GGCATTCTCCAAATACATCAACTGGAACCCTGAGGT...GATGGGTCTTGTGGCTGTACTGAAAAGTCCGGGCAGAGGACTCGATACTTCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR CAA 90 bp GAGCAAATCCTGCTGTCTACCCAGGCCTGGAAGTCTCAGCAACCTAAACAGCAAGAGGACAGTGAAAGATaGCACCAATTAACACCCGCA +
Preference number: 5 (lower is better)
Translates to: EQILLSTQAWKSQQPKQQEDSER*HQLTPA
Trigger: TGCGGGTGTTAATTGGTGCAATCTTTCACTGTCCTC...TTGCTGTTTAGGTTGCTGAGACTTCCAGGCCTGGGTAGACAGCAGGATTTGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR CAA 90 bp CATTGTGACACACCTCACTTGCAGATAACCCTGTACAGTAATGTAGTTCCACAGGGCCCAGAGAACCGGTaGATTTGCCCCTCAGTAGTG +
Preference number: 5 (lower is better)
Translates to: HCDTPHLQITLYSNVVPQGPENR*ICPSVV
Trigger: CACTACTGAGGGGCAAATCAACCGGTTCTCTGGGCC...CTGTGGAACTACATTACTGTACAGGGTTATCTGCAAGTGAGGTGTGTCACAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR CAA 90 bp TTTGCATACCCTGTGGAGCTCAAAAGGCAAATGTACAGCAGTCACCACCTCCTGGCCCTTCTCGATGCATaGGTGTCTCTGCAAGGAAAT +
Preference number: 5 (lower is better)
Translates to: FAYPVELKRQMYSSHHLLALLDA*VSLQGN
Trigger: ATTTCCTTGCAGAGACACCAATGCATCGAGAAGGGC...CAGGAGGTGGTGACTGCTGTACATTTGCCTTTTGAGCTCCACAGGGTATGCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS TCA 90 bp TTTAGGTTATTGATGAACAGGTTGGGCCCAGACAGTACGGCGTGTTaGGGCATTTCATCATCGACTCTCACCCAAGTTACCATCACAGGC +
Preference number: 5 (lower is better)
Translates to: FRLLMNRLGPDSTAC*GISSSTLTQVTITG
Trigger: GCCTGTGATGGTAACTTGGGTGAGAGTCGATGATGAAATGCCTCAACACGCCGTACTGTCTGGGCCCAACCTGTTCATCAATAACCTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000537140.5
ENST00000541434.5
ENST00000542447.6
ENST00000545380.5
ENST00000612235.4
ENST00000616271.4
CDS CCA 90 bp AAACAGATTCTGCCCATCACCTGGTTTAAAACCAGAAAAACAAGATaGTCCTTTGAGAGCTCCACGCTCCTGGCCTCACAGGCACACTCT +
Preference number: 5 (lower is better)
Translates to: KQILPITWFKTRKTR*SFESSTLLASQAHS
Trigger: AGAGTGTGCCTGTGAGGCCAGGAGCGTGGAGCTCTCAAAGGACCATCTTGTTTTTCTGGTTTTAAACCAGGTGATGGGCAGAATCTGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543540.5
CDS-3UTR CAA 90 bp ACTCTCTGGGGGAAACGAGGGCCATTTTCACTCTCGTACGCACTCTTCTCAAATGTCACTCTTATTGACTaGGCAACTGATGGTCGCAAC +
Preference number: 5 (lower is better)
Translates to: TLWGKRGPFSLSYALFSNVTLID*ATDGRN
Trigger: GTTGCGACCATCAGTTGCCAAGTCAATAAGAGTGAC...ATTTGAGAAGAGTGCGTACGAGAGTGAAAATGGCCCTCGTTTCCCCCAGAGAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR CAA 90 bp TGGAAAAAGGAGGAGTCCTTTCTGCCCCAAACCTTTCTGGACAGCGTAGGGTATGAGTCGTCACTCTTATaGACTTGGCAACTGATGGTC +
Preference number: 5 (lower is better)
Translates to: WKKEESFLPQTFLDSVGYESSLL*TWQLMV
Trigger: GACCATCAGTTGCCAAGTCAATAAGAGTGACGACTC...ATACCCTACGCTGTCCAGAAAGGTTTGGGGCAGAAAGGACTCCTCCTTTTTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR CAA 90 bp TCTCATTGTGACACACCTCACTTGCAGATAACCCTGTACAGTAATGTAGTTCCAATAGTCGTGGCTGGCTaGCTGGCCATAGCAGTGCAG +
Preference number: 5 (lower is better)
Translates to: SHCDTPHLQITLYSNVVPIVVAG*LAIAVQ
Trigger: CTGCACTGCTATGGCCAGCAAGCCAGCCACGACTAT...TGGAACTACATTACTGTACAGGGTTATCTGCAAGTGAGGTGTGTCACAATGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR CAA 90 bp TCCTCTACCTTTTCCCGAGGCTCCCCATCTAAGATATGTTCAAGGTCACTGATTTTATTGATGAACAGGTaGGGCCCAGACAGTACGGCG +
Preference number: 5 (lower is better)
Translates to: SSTFSRGSPSKICSRSLILLMNR*GPDSTA
Trigger: CGCCGTACTGTCTGGGCCCAACCTGTTCATCAATAA...AATCAGTGACCTTGAACATATCTTAGATGGGGAGCCTCGGGAAAAGGTAGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR CAA 90 bp ACTCTCTGGGGGAAACGAGGGCCATTTTCACTCTCGTACGCACTCTTCTCAAATCTTTCCCCACTATGTTaGAAGCTTCACAGCGGTATG +
Preference number: 5 (lower is better)
Translates to: TLWGKRGPFSLSYALFSNLSPLC*KLHSGM
Trigger: CATACCGCTGTGAAGCTTCAAACATAGTGGGGAAAG...ATTTGAGAAGAGTGCGTACGAGAGTGAAAATGGCCCTCGTTTCCCCCAGAGAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR CAA 90 bp ATGGAAAAAGGAGGAGTCCTTTCTGCCCCAAACCTTTCTGGACAGCGTAGGGTACTTTCCCCACTATGTTaGAAGCTTCACAGCGGTATG +
Preference number: 5 (lower is better)
Translates to: MEKGGVLSAPNLSGQRRVLSPLC*KLHSGM
Trigger: CATACCGCTGTGAAGCTTCAAACATAGTGGGGAAAG...TACCCTACGCTGTCCAGAAAGGTTTGGGGCAGAAAGGACTCCTCCTTTTTCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR CAA 90 bp TGTTTTTCCACCTCTGCTCTGACCTATCGAGAACTGAGAGCGACAGCAGACCAGTTCTTTTCTTCGGAGTaGTTCTGTCCTCCTTCTGCA +
Preference number: 5 (lower is better)
Translates to: CFSTSALTYRELRATADQFFSSE*FCPPSA
Trigger: TGCAGAAGGAGGACAGAACAACTCCGAAGAAAAGAA...CTGGTCTGCTGTCGCTCTCAGTTCTCGATAGGTCAGAGCAGAGGTGGAAAAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR CAA 90 bp TGTTTTTCCACCTCTGCTCTGACCTATCGAGAACTGAGAGCGACAGCAGACCAGCAAAAGGCCCCCATATaGCAATGGTTCTATCAAAGG +
Preference number: 5 (lower is better)
Translates to: CFSTSALTYRELRATADQQKAPI*QWFYQR
Trigger: CCTTTGATAGAACCATTGCAATATGGGGGCCTTTTG...CTGGTCTGCTGTCGCTCTCAGTTCTCGATAGGTCAGAGCAGAGGTGGAAAAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR CAA 90 bp AGGAACAGACCTCACCTGTCAGGTCTGTTTAGGGCATGGAAAAAGGAGGAGTCCCAAAAGGCCCCCATATaGCAATGGTTCTATCAAAGG +
Preference number: 5 (lower is better)
Translates to: RNRPHLSGLFRAWKKEESQKAPI*QWFYQR
Trigger: CCTTTGATAGAACCATTGCAATATGGGGGCCTTTTG...GGACTCCTCCTTTTTCCATGCCCTAAACAGACCTGACAGGTGAGGTCTGTTCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR CAA 90 bp GGGAAGGAAAAGAGTCTAAGGAATCCCAGCAGGCAAATTCCAAAATGGGAGATTGGCTGGCTGGGCTTGTaGCCCTCTGTACTTTTGACT +
Preference number: 5 (lower is better)
Translates to: GKEKSLRNPSRQIPKWEIGWLGL*PSVLLT
Trigger: AGTCAAAAGTACAGAGGGCAACAAGCCCAGCCAGCC...AATCTCCCATTTTGGAATTTGCCTGCTGGGATTCCTTAGACTCTTTTCCTTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR CAA 90 bp AACCTTTCTGGACAGCGTAGGGTATCTATACTGAGCCGTCTACAGATACAGAATGGCTGGCTGGGCTTGTaGCCCTCTGTACTTTTGACT +
Preference number: 5 (lower is better)
Translates to: NLSGQRRVSILSRLQIQNGWLGL*PSVLLT
Trigger: AGTCAAAAGTACAGAGGGCAACAAGCCCAGCCAGCC...ATTCTGTATCTGTAGACGGCTCAGTATAGATACCCTACGCTGTCCAGAAAGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR CAA 90 bp TGCAGGATAAACAGTATTAGAAGATGCAATCGTAACATTGCTGACTTCAGGATGACTCCCTACTGCTCCTaGCCCTCTGGCAGAGGCTGG +
Preference number: 5 (lower is better)
Translates to: CRINSIRRCNRNIADFRMTPYCS*PSGRGW
Trigger: CCAGCCTCTGCCAGAGGGCAAGGAGCAGTAGGGAGT...CATCCTGAAGTCAGCAATGTTACGATTGCATCTTCTAATACTGTTTATCCTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR CAA 90 bp GTCCTTGAGAATGATAGGGCCAATCGCTCTAAACTCAGGACTGGCTGGCTTGTCTGCAAACATCAAGGTTaGAAATACAGCATCGGTGGC +
Preference number: 5 (lower is better)
Translates to: VLENDRANRSKLRTGWLVCKHQG*KYSIGG
Trigger: GCCACCGATGCTGTATTTCAAACCTTGATGTTTGCA...GACAAGCCAGCCAGTCCTGAGTTTAGAGCGATTGGCCCTATCATTCTCAAGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR CAA 90 bp AGGAACAGACCTCACCTGTCAGGTCTGTTTAGGGCATGGAAAAAGGAGGAGTCCTGCAAACATCAAGGTTaGAAATACAGCATCGGTGGC +
Preference number: 5 (lower is better)
Translates to: RNRPHLSGLFRAWKKEESCKHQG*KYSIGG
Trigger: GCCACCGATGCTGTATTTCAAACCTTGATGTTTGCA...GGACTCCTCCTTTTTCCATGCCCTAAACAGACCTGACAGGTGAGGTCTGTTCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR CAA 90 bp TGTTTTTCCACCTCTGCTCTGACCTATCGAGAACTGAGAGCGACAGCAGACCAGGATGCAATCGTAACATaGCTGACTTCAGGATGGACT +
Preference number: 5 (lower is better)
Translates to: CFSTSALTYRELRATADQDAIVT*LTSGWT
Trigger: AGTCCATCCTGAAGTCAGCAATGTTACGATTGCATC...CTGGTCTGCTGTCGCTCTCAGTTCTCGATAGGTCAGAGCAGAGGTGGAAAAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR CAA 90 bp TGGAAAAAGGAGGAGTCCTTTCTGCCCCAAACCTTTCTGGACAGCGTAGGGTATAGAAAATTGGTGATCTaGGCTGGGGCTAACGTGACT +
Preference number: 5 (lower is better)
Translates to: WKKEESFLPQTFLDSVGYRKLVI*AGANVT
Trigger: AGTCACGTTAGCCCCAGCCAAGATCACCAATTTTCT...ATACCCTACGCTGTCCAGAAAGGTTTGGGGCAGAAAGGACTCCTCCTTTTTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR CAA 90 bp AGTGTGAGAACAATACCAGCCCTTCTTTTGTACCTCCTGCCTTTGTCAAGCCAAAGCTCTGTGTTCCCTTaGAACCACCTGATAGTCGTG +
Preference number: 5 (lower is better)
Translates to: SVRTIPALLLYLLPLSSQSSVFP*NHLIVV
Trigger: CACGACTATCAGGTGGTTCAAAGGGAACACAGAGCT...TTGGCTTGACAAAGGCAGGAGGTACAAAAGAAGGGCTGGTATTGTTCTCACACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR CAA 90 bp ACTGAAGTATCGAGTCCTCTGCCCGGACTTTTCAGTACAGCCACAAGACCCATCCATCTGAATGTGCACTaGAGGCTTATACTGTACTTC +
Preference number: 5 (lower is better)
Translates to: TEVSSPLPGLFSTATRPIHLNVH*RLILYF
Trigger: GAAGTACAGTATAAGCCTCAAGTGCACATTCAGATG...GATGGGTCTTGTGGCTGTACTGAAAAGTCCGGGCAGAGGACTCGATACTTCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR CAA 90 bp GTCCTTGAGAATGATAGGGCCAATCGCTCTAAACTCAGGACTGGCTGGCTTGTCCATCTGAATGTGCACTaGAGGCTTATACTGTACTTC +
Preference number: 5 (lower is better)
Translates to: VLENDRANRSKLRTGWLVHLNVH*RLILYF
Trigger: GAAGTACAGTATAAGCCTCAAGTGCACATTCAGATG...GACAAGCCAGCCAGTCCTGAGTTTAGAGCGATTGGCCCTATCATTCTCAAGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR CAA 90 bp TTTGCAATCTACCTGAGACGGAAAACACCAATCGCAACACATGAACCTGAGACATTATTGATGAACAGGTaGGGCCCAGACAGTACGGCG +
Preference number: 5 (lower is better)
Translates to: FAIYLRRKTPIATHEPETLLMNR*GPDSTA
Trigger: CGCCGTACTGTCTGGGCCCAACCTGTTCATCAATAA...TGTCTCAGGTTCATGTGTTGCGATTGGTGTTTTCCGTCTCAGGTAGATTGCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000542447.6
CDS-3UTR CAA 90 bp TTTGCATACCCTGTGGAGCTCAAAAGGCAAATGTACAGCAGTCACCACCTCCTGCACTGCTCTAAGTATTaGAAACATGGGCAGCAGCAA +
Preference number: 5 (lower is better)
Translates to: FAYPVELKRQMYSSHHLLHCSKY*KHGQQQ
Trigger: TTGCTGCTGCCCATGTTTCAAATACTTAGAGCAGTG...CAGGAGGTGGTGACTGCTGTACATTTGCCTTTTGAGCTCCACAGGGTATGCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR CAA 90 bp TCCTCTACCTTTTCCCGAGGCTCCCCATCTAAGATATGTTCAAGGTCACTGATTCTAGCACCTTCTCATTaGCATACCCTGTGGAGCTCA +
Preference number: 5 (lower is better)
Translates to: SSTFSRGSPSKICSRSLILAPSH*HTLWSS
Trigger: TGAGCTCCACAGGGTATGCAAATGAGAAGGTGCTAG...AATCAGTGACCTTGAACATATCTTAGATGGGGAGCCTCGGGAAAAGGTAGAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR CAA 90 bp ACTGAAGTATCGAGTCCTCTGCCCGGACTTTTCAGTACAGCCACAAGACCCATCTTCCAGTTGATGTATTaGGAGAATGCCAGGCCAAAA +
Preference number: 5 (lower is better)
Translates to: TEVSSPLPGLFSTATRPIFQLMY*ENARPK
Trigger: TTTTGGCCTGGCATTCTCCAAATACATCAACTGGAA...GATGGGTCTTGTGGCTGTACTGAAAAGTCCGGGCAGAGGACTCGATACTTCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR CAA 90 bp TTCTCACCCTTTGATATGATTATACTATGGTCGGAATGGGTGCTAAGGGCTCGGGTCACTCTTATTGACTaGGCAACTGATGGTCGCAAC +
Preference number: 5 (lower is better)
Translates to: FSPFDMIILWSEWVLRARVTLID*ATDGRN
Trigger: GTTGCGACCATCAGTTGCCAAGTCAATAAGAGTGAC...CCGAGCCCTTAGCACCCATTCCGACCATAGTATAATCATATCAAAGGGTGAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR CAA 90 bp TCCTCTACCTTTTCCCGAGGCTCCCCATCTAAGATATGTTCAAGGTCACTGATTGAGTCGTCACTCTTATaGACTTGGCAACTGATGGTC +
Preference number: 5 (lower is better)
Translates to: SSTFSRGSPSKICSRSLIESSLL*TWQLMV
Trigger: GACCATCAGTTGCCAAGTCAATAAGAGTGACGACTC...AATCAGTGACCTTGAACATATCTTAGATGGGGAGCCTCGGGAAAAGGTAGAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR CAA 90 bp AACCTTTCTGGACAGCGTAGGGTATCTATACTGAGCCGTCTACAGATACAGAATGCCATAGCAGTGCAGTaGACTTCAATCTCCTCACCT +
Preference number: 5 (lower is better)
Translates to: NLSGQRRVSILSRLQIQNAIAVQ*TSISSP
Trigger: AGGTGAGGAGATTGAAGTCAACTGCACTGCTATGGC...ATTCTGTATCTGTAGACGGCTCAGTATAGATACCCTACGCTGTCCAGAAAGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR CAA 90 bp AAGAGTCTAAGGAATCCCAGCAGGCAAATTCCAAAATGGGAGATTTTGGAAAAAATAGTCGTGGCTGGCTaGCTGGCCATAGCAGTGCAG +
Preference number: 5 (lower is better)
Translates to: KSLRNPSRQIPKWEILEKIVVAG*LAIAVQ
Trigger: CTGCACTGCTATGGCCAGCAAGCCAGCCACGACTAT...TTTTTCCAAAATCTCCCATTTTGGAATTTGCCTGCTGGGATTCCTTAGACTCTT
47% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR CAA 90 bp AAAGAGTCTAAGGAATCCCAGCAGGCAAATTCCAAAATGGGAGATTTTGGAAAAATAGTCGTGGCTGGCTaGCTGGCCATAGCAGTGCAG +
Preference number: 5 (lower is better)
Translates to: KESKESQQANSKMGDFGKIVVAG*LAIAVQ
Trigger: CTGCACTGCTATGGCCAGCAAGCCAGCCACGACTAT...TTTTCCAAAATCTCCCATTTTGGAATTTGCCTGCTGGGATTCCTTAGACTCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR CAA 90 bp AACCTTTCTGGACAGCGTAGGGTATCTATACTGAGCCGTCTACAGATACAGAATAGCTCTGTGTTCCCTTaGAACCACCTGATAGTCGTG +
Preference number: 5 (lower is better)
Translates to: NLSGQRRVSILSRLQIQNSSVFP*NHLIVV
Trigger: CACGACTATCAGGTGGTTCAAAGGGAACACAGAGCT...ATTCTGTATCTGTAGACGGCTCAGTATAGATACCCTACGCTGTCCAGAAAGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR CAA 90 bp TTTGCAATCTACCTGAGACGGAAAACACCAATCGCAACACATGAACCTGAGACAAGCTCTGTGTTCCCTTaGAACCACCTGATAGTCGTG +
Preference number: 5 (lower is better)
Translates to: FAIYLRRKTPIATHEPETSSVFP*NHLIVV
Trigger: CACGACTATCAGGTGGTTCAAAGGGAACACAGAGCT...TGTCTCAGGTTCATGTGTTGCGATTGGTGTTTTCCGTCTCAGGTAGATTGCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000542447.6
CDS-3UTR CAA 90 bp TGGTCGGAATGGGTGCTAAGGGCTCGGAATAGAGCTGCAGATTATAAAATTCATAGCTCTGTGTTCCCTTaGAACCACCTGATAGTCGTG +
Preference number: 5 (lower is better)
Translates to: WSEWVLRARNRAADYKIHSSVFP*NHLIVV
Trigger: CACGACTATCAGGTGGTTCAAAGGGAACACAGAGCT...ATGAATTTTATAATCTGCAGCTCTATTCCGAGCCCTTAGCACCCATTCCGACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR CAA 90 bp AAGAGTCTAAGGAATCCCAGCAGGCAAATTCCAAAATGGGAGATTTTGGAAAAAACCCCATCGTCCTCCTaGTGCACCTTCAGCATCAGC +
Preference number: 5 (lower is better)
Translates to: KSLRNPSRQIPKWEILEKTPSSS*CTFSIS
Trigger: GCTGATGCTGAAGGTGCACAAGGAGGACGATGGGGT...TTTTTCCAAAATCTCCCATTTTGGAATTTGCCTGCTGGGATTCCTTAGACTCTT
47% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR CAA 90 bp AACCTTTCTGGACAGCGTAGGGTATCTATACTGAGCCGTCTACAGATACAGAATAGACAGTACGGCGTGTaGAGGCATTTCATCATCGAC +
Preference number: 5 (lower is better)
Translates to: NLSGQRRVSILSRLQIQNRQYGV*RHFIID
Trigger: GTCGATGATGAAATGCCTCAACACGCCGTACTGTCT...ATTCTGTATCTGTAGACGGCTCAGTATAGATACCCTACGCTGTCCAGAAAGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR CAA 90 bp CATTGTGACACACCTCACTTGCAGATAACCCTGTACAGTAATGTAGTTCCACAGAGACAGTACGGCGTGTaGAGGCATTTCATCATCGAC +
Preference number: 5 (lower is better)
Translates to: HCDTPHLQITLYSNVVPQRQYGV*RHFIID
Trigger: GTCGATGATGAAATGCCTCAACACGCCGTACTGTCT...CTGTGGAACTACATTACTGTACAGGGTTATCTGCAAGTGAGGTGTGTCACAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR CAA 90 bp TCTCATTGTGACACACCTCACTTGCAGATAACCCTGTACAGTAATGTAGTTCCATTATTGATGAACAGGTaGGGCCCAGACAGTACGGCG +
Preference number: 5 (lower is better)
Translates to: SHCDTPHLQITLYSNVVPLLMNR*GPDSTA
Trigger: CGCCGTACTGTCTGGGCCCAACCTGTTCATCAATAA...TGGAACTACATTACTGTACAGGGTTATCTGCAAGTGAGGTGTGTCACAATGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR CAA 90 bp GACTCCTCTACCTTTTCCCGAGGCTCCCCATCTAAGATATGTTCAAGGTCACTGGTTTTGTTTAGGTTATaGATGAACAGGTTGGGCCCA +
Preference number: 5 (lower is better)
Translates to: DSSTFSRGSPSKICSRSLVLFRL*MNRLGP
Trigger: TGGGCCCAACCTGTTCATCAATAACCTAAACAAAAC...CAGTGACCTTGAACATATCTTAGATGGGGAGCCTCGGGAAAAGGTAGAGGAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR CAA 90 bp TGGAAAAAGGAGGAGTCCTTTCTGCCCCAAACCTTTCTGGACAGCGTAGGGTATGTTTTGTTTAGGTTATaGATGAACAGGTTGGGCCCA +
Preference number: 5 (lower is better)
Translates to: WKKEESFLPQTFLDSVGYVLFRL*MNRLGP
Trigger: TGGGCCCAACCTGTTCATCAATAACCTAAACAAAAC...ATACCCTACGCTGTCCAGAAAGGTTTGGGGCAGAAAGGACTCCTCCTTTTTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR CAA 90 bp TGGTCGGAATGGGTGCTAAGGGCTCGGAATAGAGCTGCAGATTATAAAATTCATACCCTGCACACGGAATaGCTTTCTTCTCCCCATACA +
Preference number: 5 (lower is better)
Translates to: WSEWVLRARNRAADYKIHTLHTE*LSSPHT
Trigger: TGTATGGGGAGAAGAAAGCAATTCCGTGTGCAGGGT...ATGAATTTTATAATCTGCAGCTCTATTCCGAGCCCTTAGCACCCATTCCGACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR CAA 90 bp CCCTTTGATATGATTATACTATGGTCGGAATGGGTGCTAAGGGCTCGGAATAGACAAAGGGCTGCGTATTaGGGATCCTGGCAAAAAGGT +
Preference number: 5 (lower is better)
Translates to: PFDMIILWSEWVLRARNRQRAAY*GSWQKG
Trigger: ACCTTTTTGCCAGGATCCCAAATACGCAGCCCTTTG...TCTATTCCGAGCCCTTAGCACCCATTCCGACCATAGTATAATCATATCAAAGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR CAA 90 bp GTCCTTGAGAATGATAGGGCCAATCGCTCTAAACTCAGGACTGGCTGGCTTGTCACAATGTCAGGTTCCTaGTTGGAATACATTCTGCAT +
Preference number: 5 (lower is better)
Translates to: VLENDRANRSKLRTGWLVTMSGS*LEYILH
Trigger: ATGCAGAATGTATTCCAACAAGGAACCTGACATTGT...GACAAGCCAGCCAGTCCTGAGTTTAGAGCGATTGGCCCTATCATTCTCAAGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR CAA 90 bp ACTGAAGTATCGAGTCCTCTGCCCGGACTTTTCAGTACAGCCACAAGACCCATCACAATGTCAGGTTCCTaGTTGGAATACATTCTGCAT +
Preference number: 5 (lower is better)
Translates to: TEVSSPLPGLFSTATRPITMSGS*LEYILH
Trigger: ATGCAGAATGTATTCCAACAAGGAACCTGACATTGT...GATGGGTCTTGTGGCTGTACTGAAAAGTCCGGGCAGAGGACTCGATACTTCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR CAA 90 bp AGTGTGAGAACAATACCAGCCCTTCTTTTGTACCTCCTGCCTTTGTCAAGCCAAGCACTTAAGGAAGATTaGAGGCGGTCACGTCTGAAA +
Preference number: 5 (lower is better)
Translates to: SVRTIPALLLYLLPLSSQALKED*RRSRLK
Trigger: TTTCAGACGTGACCGCCTCAAATCTTCCTTAAGTGC...TTGGCTTGACAAAGGCAGGAGGTACAAAAGAAGGGCTGGTATTGTTCTCACACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR CAA 90 bp TTTGCAATCTACCTGAGACGGAAAACACCAATCGCAACACATGAACCTGAGACAGCCCTTCTCGATGCATaGGTGTCTCTGCAAGGAAAT +
Preference number: 5 (lower is better)
Translates to: FAIYLRRKTPIATHEPETALLDA*VSLQGN
Trigger: ATTTCCTTGCAGAGACACCAATGCATCGAGAAGGGC...TGTCTCAGGTTCATGTGTTGCGATTGGTGTTTTCCGTCTCAGGTAGATTGCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR CAA 90 bp GGGAAGGAAAAGAGTCTAAGGAATCCCAGCAGGCAAATTCCAAAATGGGAGATTGTCACTCTTATTGACTaGGCAACTGATGGTCGCAAC +
Preference number: 5 (lower is better)
Translates to: GKEKSLRNPSRQIPKWEIVTLID*ATDGRN
Trigger: GTTGCGACCATCAGTTGCCAAGTCAATAAGAGTGAC...AATCTCCCATTTTGGAATTTGCCTGCTGGGATTCCTTAGACTCTTTTCCTTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR CAA 90 bp GTGGGGGATCGGTATAGAGCTGGCAAAAGTATCTTCCTTCATCAGAAATTGAGAGTCACTCTTATTGACTaGGCAACTGATGGTCGCAAC +
Preference number: 5 (lower is better)
Translates to: VGDRYRAGKSIFLHQKLRVTLID*ATDGRN
Trigger: GTTGCGACCATCAGTTGCCAAGTCAATAAGAGTGAC...TCTCAATTTCTGATGAAGGAAGATACTTTTGCCAGCTCTATACCGATCCCCCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540951.1
CDS-3UTR CAA 90 bp TGGTCGGAATGGGTGCTAAGGGCTCGGAATAGAGCTGCAGATTATAAAATTCATGAGTCGTCACTCTTATaGACTTGGCAACTGATGGTC +
Preference number: 5 (lower is better)
Translates to: WSEWVLRARNRAADYKIHESSLL*TWQLMV
Trigger: GACCATCAGTTGCCAAGTCAATAAGAGTGACGACTC...ATGAATTTTATAATCTGCAGCTCTATTCCGAGCCCTTAGCACCCATTCCGACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR CAA 90 bp AATTTGTCCACTTATATAAAAGGAACAGACCTCACCTGTCAGGTCTGTTTAGGGTTATTGATGAACAGGTaGGGCCCAGACAGTACGGCG +
Preference number: 5 (lower is better)
Translates to: NLSTYIKGTDLTCQVCLGLLMNR*GPDSTA
Trigger: CGCCGTACTGTCTGGGCCCAACCTGTTCATCAATAA...CCCTAAACAGACCTGACAGGTGAGGTCTGTTCCTTTTATATAAGTGGACAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR CAA 90 bp GAAGGAAAAGAGTCTAAGGAATCCCAGCAGGCAAATTCCAAAATGGGAGATTTTTTATTGATGAACAGGTaGGGCCCAGACAGTACGGCG +
Preference number: 5 (lower is better)
Translates to: EGKESKESQQANSKMGDFLLMNR*GPDSTA
Trigger: CGCCGTACTGTCTGGGCCCAACCTGTTCATCAATAA...AAAATCTCCCATTTTGGAATTTGCCTGCTGGGATTCCTTAGACTCTTTTCCTTC
46% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR CAA 90 bp CCCTTTGATATGATTATACTATGGTCGGAATGGGTGCTAAGGGCTCGGAATAGACTTTCCCCACTATGTTaGAAGCTTCACAGCGGTATG +
Preference number: 5 (lower is better)
Translates to: PFDMIILWSEWVLRARNRLSPLC*KLHSGM
Trigger: CATACCGCTGTGAAGCTTCAAACATAGTGGGGAAAG...TCTATTCCGAGCCCTTAGCACCCATTCCGACCATAGTATAATCATATCAAAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR CAA 90 bp GGGAAGGAAAAGAGTCTAAGGAATCCCAGCAGGCAAATTCCAAAATGGGAGATTTGTCCTCCTTCTGCATaGATTATAGCTGTGTCTGCG +
Preference number: 5 (lower is better)
Translates to: GKEKSLRNPSRQIPKWEICPPSA*IIAVSA
Trigger: CGCAGACACAGCTATAATCAATGCAGAAGGAGGACA...AATCTCCCATTTTGGAATTTGCCTGCTGGGATTCCTTAGACTCTTTTCCTTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR CAA 90 bp ATACTATGGTCGGAATGGGTGCTAAGGGCTCGGAATAGAGCTGCAGATTATAAATGTCCTCCTTCTGCATaGATTATAGCTGTGTCTGCG +
Preference number: 5 (lower is better)
Translates to: ILWSEWVLRARNRAADYKCPPSA*IIAVSA
Trigger: CGCAGACACAGCTATAATCAATGCAGAAGGAGGACA...TTTATAATCTGCAGCTCTATTCCGAGCCCTTAGCACCCATTCCGACCATAGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR CAA 90 bp AGTGTGAGAACAATACCAGCCCTTCTTTTGTACCTCCTGCCTTTGTCAAGCCAATTCTTTTCTTCGGAGTaGTTCTGTCCTCCTTCTGCA +
Preference number: 5 (lower is better)
Translates to: SVRTIPALLLYLLPLSSQFFSSE*FCPPSA
Trigger: TGCAGAAGGAGGACAGAACAACTCCGAAGAAAAGAA...TTGGCTTGACAAAGGCAGGAGGTACAAAAGAAGGGCTGGTATTGTTCTCACACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR CAA 90 bp TTTGCAATCTACCTGAGACGGAAAACACCAATCGCAACACATGAACCTGAGACATGTGACACACCTCACTaGCAGATAACCCTGTACAGT +
Preference number: 5 (lower is better)
Translates to: FAIYLRRKTPIATHEPETCDTPH*QITLYS
Trigger: ACTGTACAGGGTTATCTGCAAGTGAGGTGTGTCACA...TGTCTCAGGTTCATGTGTTGCGATTGGTGTTTTCCGTCTCAGGTAGATTGCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000542447.6
CDS-3UTR CAA 90 bp AAGAGTCTAAGGAATCCCAGCAGGCAAATTCCAAAATGGGAGATTTTGGAAAAATGGGAAAAGGGCACTTaGGGCCTGGCCAGACGTTAT +
Preference number: 5 (lower is better)
Translates to: KSLRNPSRQIPKWEILEKWEKGT*GLARRY
Trigger: ATAACGTCTGGCCAGGCCCAAAGTGCCCTTTTCCCA...TTTTTCCAAAATCTCCCATTTTGGAATTTGCCTGCTGGGATTCCTTAGACTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR CAA 90 bp TCCTCTACCTTTTCCCGAGGCTCCCCATCTAAGATATGTTCAAGGTCACTGATTTTGCCCTCTGTACTTTaGACTCACATTCCTTCTCCA +
Preference number: 5 (lower is better)
Translates to: SSTFSRGSPSKICSRSLILPSVL*THIPSP
Trigger: TGGAGAAGGAATGTGAGTCAAAAGTACAGAGGGCAA...AATCAGTGACCTTGAACATATCTTAGATGGGGAGCCTCGGGAAAAGGTAGAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR CAA 90 bp GGGAAGGAAAAGAGTCTAAGGAATCCCAGCAGGCAAATTCCAAAATGGGAGATTCTTCTAAGTCGTGGTTaGCAAGGGCATGATGTGTCT +
Preference number: 5 (lower is better)
Translates to: GKEKSLRNPSRQIPKWEILLSRG*QGHDVS
Trigger: AGACACATCATGCCCTTGCAAACCACGACTTAGAAG...AATCTCCCATTTTGGAATTTGCCTGCTGGGATTCCTTAGACTCTTTTCCTTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR CAA 90 bp CCCTTTGATATGATTATACTATGGTCGGAATGGGTGCTAAGGGCTCGGAATAGAGAGGACAGTGAAAGATaGCACCAATTAACACCCGCA +
Preference number: 5 (lower is better)
Translates to: PFDMIILWSEWVLRARNREDSER*HQLTPA
Trigger: TGCGGGTGTTAATTGGTGCAATCTTTCACTGTCCTC...TCTATTCCGAGCCCTTAGCACCCATTCCGACCATAGTATAATCATATCAAAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR CAA 90 bp GGGAAGGAAAAGAGTCTAAGGAATCCCAGCAGGCAAATTCCAAAATGGGAGATTTATTCCAGTGGGTCCTaGAGAATGATAGGGCCAATC +
Preference number: 5 (lower is better)
Translates to: GKEKSLRNPSRQIPKWEIYSSGS*RMIGPI
Trigger: GATTGGCCCTATCATTCTCAAGGACCCACTGGAATA...AATCTCCCATTTTGGAATTTGCCTGCTGGGATTCCTTAGACTCTTTTCCTTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR CAA 90 bp TTCTCACCCTTTGATATGATTATACTATGGTCGGAATGGGTGCTAAGGGCTCGGTTAAAAGAGGCCATATaGCATTCTGAAGGCCCCTCA +
Preference number: 5 (lower is better)
Translates to: FSPFDMIILWSEWVLRARLKEAI*HSEGPS
Trigger: TGAGGGGCCTTCAGAATGCAATATGGCCTCTTTTAA...CCGAGCCCTTAGCACCCATTCCGACCATAGTATAATCATATCAAAGGGTGAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR CAA 90 bp TCTCATTGTGACACACCTCACTTGCAGATAACCCTGTACAGTAATGTAGTTCCAAGAGAACCGGTTGATTaGCCCCTCAGTAGTGGTTCT +
Preference number: 5 (lower is better)
Translates to: SHCDTPHLQITLYSNVVPREPVD*PLSSGS
Trigger: AGAACCACTACTGAGGGGCAAATCAACCGGTTCTCT...TGGAACTACATTACTGTACAGGGTTATCTGCAAGTGAGGTGTGTCACAATGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR CAA 90 bp ATACTATGGTCGGAATGGGTGCTAAGGGCTCGGAATAGAGCTGCAGATTATAAAGCACTTAAGGAAGATTaGAGGCGGTCACGTCTGAAA +
Preference number: 5 (lower is better)
Translates to: ILWSEWVLRARNRAADYKALKED*RRSRLK
Trigger: TTTCAGACGTGACCGCCTCAAATCTTCCTTAAGTGC...TTTATAATCTGCAGCTCTATTCCGAGCCCTTAGCACCCATTCCGACCATAGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR CAA 90 bp CCCTTTGATATGATTATACTATGGTCGGAATGGGTGCTAAGGGCTCGGAATAGACAGATAGAGAGAAAATaGGTGATCTTGGCTGGGGCT +
Preference number: 5 (lower is better)
Translates to: PFDMIILWSEWVLRARNRQIERK*VILAGA
Trigger: AGCCCCAGCCAAGATCACCAATTTTCTCTCTATCTG...TCTATTCCGAGCCCTTAGCACCCATTCCGACCATAGTATAATCATATCAAAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR CAA 90 bp TTTGCAATCTACCTGAGACGGAAAACACCAATCGCAACACATGAACCTGAGACACAGATAGAGAGAAAATaGGTGATCTTGGCTGGGGCT +
Preference number: 5 (lower is better)
Translates to: FAIYLRRKTPIATHEPETQIERK*VILAGA
Trigger: AGCCCCAGCCAAGATCACCAATTTTCTCTCTATCTG...TGTCTCAGGTTCATGTGTTGCGATTGGTGTTTTCCGTCTCAGGTAGATTGCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS GCA 90 bp GAAATTTGGTTCACGCCGTTAGACAGTAGCACATTGTTTCCAAACTaGATATCAAGGCTGAAACACAATCTTCAGGTCCTGCAGCCATTC +
Preference number: 5 (lower is better)
Translates to: EIWFTPLDSSTLFPN*ISRLKHNLQVLQPF
Trigger: GAATGGCTGCAGGACCTGAAGATTGTGTTTCAGCCTTGATATGCAGTTTGGAAACAATGTGCTACTGTCTAACGGCGTGAACCAAATTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543375.5
CDS-3UTR CAA 90 bp AATTTGTCCACTTATATAAAAGGAACAGACCTCACCTGTCAGGTCTGTTTAGGGGCCATAGCAGTGCAGTaGACTTCAATCTCCTCACCT +
Preference number: 5 (lower is better)
Translates to: NLSTYIKGTDLTCQVCLGAIAVQ*TSISSP
Trigger: AGGTGAGGAGATTGAAGTCAACTGCACTGCTATGGC...CCCTAAACAGACCTGACAGGTGAGGTCTGTTCCTTTTATATAAGTGGACAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR CAA 90 bp AATTTGTCCACTTATATAAAAGGAACAGACCTCACCTGTCAGGTCTGTTTAGGGAGCTCTGTGTTCCCTTaGAACCACCTGATAGTCGTG +
Preference number: 5 (lower is better)
Translates to: NLSTYIKGTDLTCQVCLGSSVFP*NHLIVV
Trigger: CACGACTATCAGGTGGTTCAAAGGGAACACAGAGCT...CCCTAAACAGACCTGACAGGTGAGGTCTGTTCCTTTTATATAAGTGGACAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR CAA 90 bp TTTGCAATCTACCTGAGACGGAAAACACCAATCGCAACACATGAACCTGAGACATTCTTTTCTTCGGAGTaGTTCTGTCCTCCTTCTGCA +
Preference number: 5 (lower is better)
Translates to: FAIYLRRKTPIATHEPETFFSSE*FCPPSA
Trigger: TGCAGAAGGAGGACAGAACAACTCCGAAGAAAAGAA...TGTCTCAGGTTCATGTGTTGCGATTGGTGTTTTCCGTCTCAGGTAGATTGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000542447.6
CDS-3UTR CAA 90 bp CCCTTTGATATGATTATACTATGGTCGGAATGGGTGCTAAGGGCTCGGAATAGATTCTTTTCTTCGGAGTaGTTCTGTCCTCCTTCTGCA +
Preference number: 5 (lower is better)
Translates to: PFDMIILWSEWVLRARNRFFSSE*FCPPSA
Trigger: TGCAGAAGGAGGACAGAACAACTCCGAAGAAAAGAA...TCTATTCCGAGCCCTTAGCACCCATTCCGACCATAGTATAATCATATCAAAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR CAA 90 bp AACCTTTCTGGACAGCGTAGGGTATCTATACTGAGCCGTCTACAGATACAGAATTTCTTTTCTTCGGAGTaGTTCTGTCCTCCTTCTGCA +
Preference number: 5 (lower is better)
Translates to: NLSGQRRVSILSRLQIQNFFSSE*FCPPSA
Trigger: TGCAGAAGGAGGACAGAACAACTCCGAAGAAAAGAA...ATTCTGTATCTGTAGACGGCTCAGTATAGATACCCTACGCTGTCCAGAAAGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR CAA 90 bp TTTGCAATCTACCTGAGACGGAAAACACCAATCGCAACACATGAACCTGAGACACACTGCTCTAAGTATTaGAAACATGGGCAGCAGCAA +
Preference number: 5 (lower is better)
Translates to: FAIYLRRKTPIATHEPETHCSKY*KHGQQQ
Trigger: TTGCTGCTGCCCATGTTTCAAATACTTAGAGCAGTG...TGTCTCAGGTTCATGTGTTGCGATTGGTGTTTTCCGTCTCAGGTAGATTGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000542447.6
CDS-3UTR CAA 90 bp CATTGTGACACACCTCACTTGCAGATAACCCTGTACAGTAATGTAGTTCCACAGCAAAAGGCCCCCATATaGCAATGGTTCTATCAAAGG +
Preference number: 5 (lower is better)
Translates to: HCDTPHLQITLYSNVVPQQKAPI*QWFYQR
Trigger: CCTTTGATAGAACCATTGCAATATGGGGGCCTTTTG...CTGTGGAACTACATTACTGTACAGGGTTATCTGCAAGTGAGGTGTGTCACAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR CAA 90 bp GGGAAGGAAAAGAGTCTAAGGAATCCCAGCAGGCAAATTCCAAAATGGGAGATTCAAAAGGCCCCCATATaGCAATGGTTCTATCAAAGG +
Preference number: 5 (lower is better)
Translates to: GKEKSLRNPSRQIPKWEIQKAPI*QWFYQR
Trigger: CCTTTGATAGAACCATTGCAATATGGGGGCCTTTTG...AATCTCCCATTTTGGAATTTGCCTGCTGGGATTCCTTAGACTCTTTTCCTTCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR CAA 90 bp TCCTCTACCTTTTCCCGAGGCTCCCCATCTAAGATATGTTCAAGGTCACTGATTTTGTGGCTTTTTGTCTaGGTTAAGTGCCTAGGGATA +
Preference number: 5 (lower is better)
Translates to: SSTFSRGSPSKICSRSLILWLFV*VKCLGI
Trigger: TATCCCTAGGCACTTAACCAAGACAAAAAGCCACAA...AATCAGTGACCTTGAACATATCTTAGATGGGGAGCCTCGGGAAAAGGTAGAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR CAA 90 bp ATGGAAAAAGGAGGAGTCCTTTCTGCCCCAAACCTTTCTGGACAGCGTAGGGTAAAAAAGGGATGTTCATaGTGGCTTTTTGTCTTGGTT +
Preference number: 5 (lower is better)
Translates to: MEKGGVLSAPNLSGQRRVKKGCS*WLFVLV
Trigger: AACCAAGACAAAAAGCCACAATGAACATCCCTTTTT...TACCCTACGCTGTCCAGAAAGGTTTGGGGCAGAAAGGACTCCTCCTTTTTCCAT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 20 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR CAA 90 bp AGTGTGAGAACAATACCAGCCCTTCTTTTGTACCTCCTGCCTTTGTCAAGCCAATTCCAGTTGATGTATTaGGAGAATGCCAGGCCAAAA +
Preference number: 5 (lower is better)
Translates to: SVRTIPALLLYLLPLSSQFQLMY*ENARPK
Trigger: TTTTGGCCTGGCATTCTCCAAATACATCAACTGGAA...TTGGCTTGACAAAGGCAGGAGGTACAAAAGAAGGGCTGGTATTGTTCTCACACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR CAA 90 bp CAAGTTCCAATATCACTGTCTCTTTATCATCTAAATAGGGCCAGTTGGACACCTCAAAGGGCTGCGTATTaGGGATCCTGGCAAAAAGGT +
Preference number: 5 (lower is better)
Translates to: QVPISLSLYHLNRASWTPQRAAY*GSWQKG
Trigger: ACCTTTTTGCCAGGATCCCAAATACGCAGCCCTTTG...AGGTGTCCAACTGGCCCTATTTAGATGATAAAGAGACAGTGATATTGGAACTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR CAA 90 bp TGGTCGGAATGGGTGCTAAGGGCTCGGAATAGAGCTGCAGATTATAAAATTCATGATGCAATCGTAACATaGCTGACTTCAGGATGGACT +
Preference number: 5 (lower is better)
Translates to: WSEWVLRARNRAADYKIHDAIVT*LTSGWT
Trigger: AGTCCATCCTGAAGTCAGCAATGTTACGATTGCATC...ATGAATTTTATAATCTGCAGCTCTATTCCGAGCCCTTAGCACCCATTCCGACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR CAA 90 bp AATTTGTCCACTTATATAAAAGGAACAGACCTCACCTGTCAGGTCTGTTTAGGGGTTCTGTCGTCGCCGTaGTGTCGTATACATACAGCA +
Preference number: 5 (lower is better)
Translates to: NLSTYIKGTDLTCQVCLGVLSSP*CRIHTA
Trigger: TGCTGTATGTATACGACACAACGGCGACGACAGAAC...CCCTAAACAGACCTGACAGGTGAGGTCTGTTCCTTTTATATAAGTGGACAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536727.5
CDS-3UTR CAA 90 bp GAAGGAAAAGAGTCTAAGGAATCCCAGCAGGCAAATTCCAAAATGGGAGATTTTTCTTCCACCTCCGATTaGCCTTTTAGCTCTGTGTTC +
Preference number: 5 (lower is better)
Translates to: EGKESKESQQANSKMGDFSSTSD*PFSSVF
Trigger: GAACACAGAGCTAAAAGGCAAATCGGAGGTGGAAGA...AAAATCTCCCATTTTGGAATTTGCCTGCTGGGATTCCTTAGACTCTTTTCCTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR CAA 90 bp AATTTGTCCACTTATATAAAAGGAACAGACCTCACCTGTCAGGTCTGTTTAGGGTCTTCCACCTCCGATTaGCCTTTTAGCTCTGTGTTC +
Preference number: 5 (lower is better)
Translates to: NLSTYIKGTDLTCQVCLGSSTSD*PFSSVF
Trigger: GAACACAGAGCTAAAAGGCAAATCGGAGGTGGAAGA...CCCTAAACAGACCTGACAGGTGAGGTCTGTTCCTTTTATATAAGTGGACAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR CAA 90 bp TTTGCAATCTACCTGAGACGGAAAACACCAATCGCAACACATGAACCTGAGACACATCTGAATGTGCACTaGAGGCTTATACTGTACTTC +
Preference number: 5 (lower is better)
Translates to: FAIYLRRKTPIATHEPETHLNVH*RLILYF
Trigger: GAAGTACAGTATAAGCCTCAAGTGCACATTCAGATG...TGTCTCAGGTTCATGTGTTGCGATTGGTGTTTTCCGTCTCAGGTAGATTGCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000542447.6
CDS-3UTR CAA 90 bp GGGAAGGAAAAGAGTCTAAGGAATCCCAGCAGGCAAATTCCAAAATGGGAGATTGTTTTGTTTAGGTTATaGATGAACAGGTTGGGCCCA +
Preference number: 5 (lower is better)
Translates to: GKEKSLRNPSRQIPKWEIVLFRL*MNRLGP
Trigger: TGGGCCCAACCTGTTCATCAATAACCTAAACAAAAC...AATCTCCCATTTTGGAATTTGCCTGCTGGGATTCCTTAGACTCTTTTCCTTCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR CAA 90 bp TGGTCGGAATGGGTGCTAAGGGCTCGGAATAGAGCTGCAGATTATAAAATTCATGTTTTGTTTAGGTTATaGATGAACAGGTTGGGCCCA +
Preference number: 5 (lower is better)
Translates to: WSEWVLRARNRAADYKIHVLFRL*MNRLGP
Trigger: TGGGCCCAACCTGTTCATCAATAACCTAAACAAAAC...ATGAATTTTATAATCTGCAGCTCTATTCCGAGCCCTTAGCACCCATTCCGACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR CAA 90 bp ATACTATGGTCGGAATGGGTGCTAAGGGCTCGGAATAGAGCTGCAGATTATAAAGTTTTGTTTAGGTTATaGATGAACAGGTTGGGCCCA +
Preference number: 5 (lower is better)
Translates to: ILWSEWVLRARNRAADYKVLFRL*MNRLGP
Trigger: TGGGCCCAACCTGTTCATCAATAACCTAAACAAAAC...TTTATAATCTGCAGCTCTATTCCGAGCCCTTAGCACCCATTCCGACCATAGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR CAA 90 bp AATTTGTCCACTTATATAAAAGGAACAGACCTCACCTGTCAGGTCTGTTTAGGGCTTTCCCCACTATGTTaGAAGCTTCACAGCGGTATG +
Preference number: 5 (lower is better)
Translates to: NLSTYIKGTDLTCQVCLGLSPLC*KLHSGM
Trigger: CATACCGCTGTGAAGCTTCAAACATAGTGGGGAAAG...CCCTAAACAGACCTGACAGGTGAGGTCTGTTCCTTTTATATAAGTGGACAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR CAA 90 bp TCTCATTGTGACACACCTCACTTGCAGATAACCCTGTACAGTAATGTAGTTCCACAAAAGGCCCCCATATaGCAATGGTTCTATCAAAGG +
Preference number: 5 (lower is better)
Translates to: SHCDTPHLQITLYSNVVPQKAPI*QWFYQR
Trigger: CCTTTGATAGAACCATTGCAATATGGGGGCCTTTTG...TGGAACTACATTACTGTACAGGGTTATCTGCAAGTGAGGTGTGTCACAATGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR CAA 90 bp GAGTTTTCATTGTTTGTTCACCCAAATCTTTACGACAACAGAGAAGAATGCATTTGGGAAAAGGGCACTTaGGGCCTGGCCAGACGTTAT +
Preference number: 5 (lower is better)
Translates to: EFSLFVHPNLYDNREECIWEKGT*GLARRY
Trigger: ATAACGTCTGGCCAGGCCCAAAGTGCCCTTTTCCCA...AATGCATTCTTCTCTGTTGTCGTAAAGATTTGGGTGAACAAACAATGAAAACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR CAA 90 bp TTCTCACCCTTTGATATGATTATACTATGGTCGGAATGGGTGCTAAGGGCTCGGTTCTGGAGCTTACCTTaGCTTTTCCTATGGAACTTT +
Preference number: 5 (lower is better)
Translates to: FSPFDMIILWSEWVLRARFWSLP*LFLWNF
Trigger: AAAGTTCCATAGGAAAAGCAAAGGTAAGCTCCAGAA...CCGAGCCCTTAGCACCCATTCCGACCATAGTATAATCATATCAAAGGGTGAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR CAA 90 bp TCTCATTGTGACACACCTCACTTGCAGATAACCCTGTACAGTAATGTAGTTCCATTGCCCTCTGTACTTTaGACTCACATTCCTTCTCCA +
Preference number: 5 (lower is better)
Translates to: SHCDTPHLQITLYSNVVPLPSVL*THIPSP
Trigger: TGGAGAAGGAATGTGAGTCAAAAGTACAGAGGGCAA...TGGAACTACATTACTGTACAGGGTTATCTGCAAGTGAGGTGTGTCACAATGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR CAA 90 bp AGTGTGAGAACAATACCAGCCCTTCTTTTGTACCTCCTGCCTTTGTCAAGCCAAGTTTCTTTGAGGTTCTaGATGACAGAATCAAAGGAG +
Preference number: 5 (lower is better)
Translates to: SVRTIPALLLYLLPLSSQVSLRF*MTESKE
Trigger: CTCCTTTGATTCTGTCATCAAGAACCTCAAAGAAAC...TTGGCTTGACAAAGGCAGGAGGTACAAAAGAAGGGCTGGTATTGTTCTCACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR CAA 90 bp GAAGGAAAAGAGTCTAAGGAATCCCAGCAGGCAAATTCCAAAATGGGAGATTTTAGAAAATTGGTGATCTaGGCTGGGGCTAACGTGACT +
Preference number: 5 (lower is better)
Translates to: EGKESKESQQANSKMGDFRKLVI*AGANVT
Trigger: AGTCACGTTAGCCCCAGCCAAGATCACCAATTTTCT...AAAATCTCCCATTTTGGAATTTGCCTGCTGGGATTCCTTAGACTCTTTTCCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS CCA 90 bp CATGTTCCTAATTGCAACACTATAGCTGCCCTCATCACTTTATTCTaGGAGAGGAGGTTAGAGAAAACAGGCCTTTATGTCTGGCAAAAT +
Preference number: 5 (lower is better)
Translates to: HVPNCNTIAALITLF*ERRLEKTGLYVWQN
Trigger: ATTTTGCCAGACATAAAGGCCTGTTTTCTCTAACCTCCTCTCCCAGAATAAAGTGATGAGGGCAGCTATAGTGTTGCAATTAGGAACATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537140.5
ENST00000545960.5
CDS CCA 90 bp TCAGCTTTTGTGGAGAGTTTTCCCTTCTTCCCATTAGCAGAAATTTaGTTCACGCCGTTAGACAGTAGCACATTGTTTCCAAACTGCATA +
Preference number: 5 (lower is better)
Translates to: SAFVESFPFFPLAEI*FTPLDSSTLFPNCI
Trigger: TATGCAGTTTGGAAACAATGTGCTACTGTCTAACGGCGTGAACCAAATTTCTGCTAATGGGAAGAAGGGAAAACTCTCCACAAAAGCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543375.5
CDS-3UTR CAA 90 bp AAAGAGTCTAAGGAATCCCAGCAGGCAAATTCCAAAATGGGAGATTTTGGAAAAGAGTCGTCACTCTTATaGACTTGGCAACTGATGGTC +
Preference number: 5 (lower is better)
Translates to: KESKESQQANSKMGDFGKESSLL*TWQLMV
Trigger: GACCATCAGTTGCCAAGTCAATAAGAGTGACGACTC...TTTTCCAAAATCTCCCATTTTGGAATTTGCCTGCTGGGATTCCTTAGACTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR CAA 90 bp AAGAGTCTAAGGAATCCCAGCAGGCAAATTCCAAAATGGGAGATTTTGGAAAAAGAGTCGTCACTCTTATaGACTTGGCAACTGATGGTC +
Preference number: 5 (lower is better)
Translates to: KSLRNPSRQIPKWEILEKESSLL*TWQLMV
Trigger: GACCATCAGTTGCCAAGTCAATAAGAGTGACGACTC...TTTTTCCAAAATCTCCCATTTTGGAATTTGCCTGCTGGGATTCCTTAGACTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR CAA 90 bp TCTCATTGTGACACACCTCACTTGCAGATAACCCTGTACAGTAATGTAGTTCCACATCTGAATGTGCACTaGAGGCTTATACTGTACTTC +
Preference number: 5 (lower is better)
Translates to: SHCDTPHLQITLYSNVVPHLNVH*RLILYF
Trigger: GAAGTACAGTATAAGCCTCAAGTGCACATTCAGATG...TGGAACTACATTACTGTACAGGGTTATCTGCAAGTGAGGTGTGTCACAATGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR CAA 90 bp AATGAAAGTTTCACACAGATTCGAGTTGGAAATCCCAGCATGACAAATATCTGTAGACAGTACGGCGTGTaGAGGCATTTCATCATCGAC +
Preference number: 5 (lower is better)
Translates to: NESFTQIRVGNPSMTNICRQYGV*RHFIID
Trigger: GTCGATGATGAAATGCCTCAACACGCCGTACTGTCT...ACAGATATTTGTCATGCTGGGATTTCCAACTCGAATCTGTGTGAAACTTTCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR CAA 90 bp AAGAGTCTAAGGAATCCCAGCAGGCAAATTCCAAAATGGGAGATTTTGGAAAAACTTTCCCCACTATGTTaGAAGCTTCACAGCGGTATG +
Preference number: 5 (lower is better)
Translates to: KSLRNPSRQIPKWEILEKLSPLC*KLHSGM
Trigger: CATACCGCTGTGAAGCTTCAAACATAGTGGGGAAAG...TTTTTCCAAAATCTCCCATTTTGGAATTTGCCTGCTGGGATTCCTTAGACTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR CAA 90 bp TGCAGGATAAACAGTATTAGAAGATGCAATCGTAACATTGCTGACTTCAGGATGTGTCCTCCTTCTGCATaGATTATAGCTGTGTCTGCG +
Preference number: 5 (lower is better)
Translates to: CRINSIRRCNRNIADFRMCPPSA*IIAVSA
Trigger: CGCAGACACAGCTATAATCAATGCAGAAGGAGGACA...CATCCTGAAGTCAGCAATGTTACGATTGCATCTTCTAATACTGTTTATCCTGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR CAA 90 bp AAAGAGTCTAAGGAATCCCAGCAGGCAAATTCCAAAATGGGAGATTTTGGAAAATGTCCTCCTTCTGCATaGATTATAGCTGTGTCTGCG +
Preference number: 5 (lower is better)
Translates to: KESKESQQANSKMGDFGKCPPSA*IIAVSA
Trigger: CGCAGACACAGCTATAATCAATGCAGAAGGAGGACA...TTTTCCAAAATCTCCCATTTTGGAATTTGCCTGCTGGGATTCCTTAGACTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR CAA 90 bp GAAGGAAAAGAGTCTAAGGAATCCCAGCAGGCAAATTCCAAAATGGGAGATTTTCACTGCTCTAAGTATTaGAAACATGGGCAGCAGCAA +
Preference number: 5 (lower is better)
Translates to: EGKESKESQQANSKMGDFHCSKY*KHGQQQ
Trigger: TTGCTGCTGCCCATGTTTCAAATACTTAGAGCAGTG...AAAATCTCCCATTTTGGAATTTGCCTGCTGGGATTCCTTAGACTCTTTTCCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR CAA 90 bp AAGAGTCTAAGGAATCCCAGCAGGCAAATTCCAAAATGGGAGATTTTGGAAAAATATTCCAGTGGGTCCTaGAGAATGATAGGGCCAATC +
Preference number: 5 (lower is better)
Translates to: KSLRNPSRQIPKWEILEKYSSGS*RMIGPI
Trigger: GATTGGCCCTATCATTCTCAAGGACCCACTGGAATA...TTTTTCCAAAATCTCCCATTTTGGAATTTGCCTGCTGGGATTCCTTAGACTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR CAA 90 bp TTTGCAATCTACCTGAGACGGAAAACACCAATCGCAACACATGAACCTGAGACAATACTAAGGCTTTGCTaGGCCATTACCCAAAATGAT +
Preference number: 5 (lower is better)
Translates to: FAIYLRRKTPIATHEPETILRLC*AITQND
Trigger: ATCATTTTGGGTAATGGCCAAGCAAAGCCTTAGTAT...TGTCTCAGGTTCATGTGTTGCGATTGGTGTTTTCCGTCTCAGGTAGATTGCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR CAA 90 bp TGGTCGGAATGGGTGCTAAGGGCTCGGAATAGAGCTGCAGATTATAAAATTCATATGTCAGGTTCCTTGTaGGAATACATTCTGCATTTC +
Preference number: 5 (lower is better)
Translates to: WSEWVLRARNRAADYKIHMSGSL*EYILHF
Trigger: GAAATGCAGAATGTATTCCAACAAGGAACCTGACAT...ATGAATTTTATAATCTGCAGCTCTATTCCGAGCCCTTAGCACCCATTCCGACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS TCA 90 bp CACATGAGAAGTATGACTTACTGCTACAGCATCAGAGAAGAGGAATaGAACCCTCAAAATCCATCCATTTTGAAGCTGATGTATCCAAGC +
Preference number: 5 (lower is better)
Translates to: HMRSMTYCYSIREEE*NPQNPSILKLMYPS
Trigger: GCTTGGATACATCAGCTTCAAAATGGATGGATTTTGAGGGTTTCATTCCTCTTCTCTGATGCTGTAGCAGTAAGTCATACTTCTCATGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536781.1
CDS-3UTR CAA 90 bp AATGAAAGTTTCACACAGATTCGAGTTGGAAATCCCAGCATGACAAATATCTGTGTCACTCTTATTGACTaGGCAACTGATGGTCGCAAC +
Preference number: 5 (lower is better)
Translates to: NESFTQIRVGNPSMTNICVTLID*ATDGRN
Trigger: GTTGCGACCATCAGTTGCCAAGTCAATAAGAGTGAC...ACAGATATTTGTCATGCTGGGATTTCCAACTCGAATCTGTGTGAAACTTTCATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR CAA 90 bp AATGAAAGTTTCACACAGATTCGAGTTGGAAATCCCAGCATGACAAATATCTGTTCTTCCACCTCCGATTaGCCTTTTAGCTCTGTGTTC +
Preference number: 5 (lower is better)
Translates to: NESFTQIRVGNPSMTNICSSTSD*PFSSVF
Trigger: GAACACAGAGCTAAAAGGCAAATCGGAGGTGGAAGA...ACAGATATTTGTCATGCTGGGATTTCCAACTCGAATCTGTGTGAAACTTTCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR CAA 90 bp CAAGTTCCAATATCACTGTCTCTTTATCATCTAAATAGGGCCAGTTGGACACCTGTTTTGTTTAGGTTATaGATGAACAGGTTGGGCCCA +
Preference number: 5 (lower is better)
Translates to: QVPISLSLYHLNRASWTPVLFRL*MNRLGP
Trigger: TGGGCCCAACCTGTTCATCAATAACCTAAACAAAAC...AGGTGTCCAACTGGCCCTATTTAGATGATAAAGAGACAGTGATATTGGAACTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR CAA 90 bp AATGAAAGTTTCACACAGATTCGAGTTGGAAATCCCAGCATGACAAATATCTGTCTTTCCCCACTATGTTaGAAGCTTCACAGCGGTATG +
Preference number: 5 (lower is better)
Translates to: NESFTQIRVGNPSMTNICLSPLC*KLHSGM
Trigger: CATACCGCTGTGAAGCTTCAAACATAGTGGGGAAAG...ACAGATATTTGTCATGCTGGGATTTCCAACTCGAATCTGTGTGAAACTTTCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR CAA 90 bp AAGAGTCTAAGGAATCCCAGCAGGCAAATTCCAAAATGGGAGATTTTGGAAAAATTCTTTTCTTCGGAGTaGTTCTGTCCTCCTTCTGCA +
Preference number: 5 (lower is better)
Translates to: KSLRNPSRQIPKWEILEKFFSSE*FCPPSA
Trigger: TGCAGAAGGAGGACAGAACAACTCCGAAGAAAAGAA...TTTTTCCAAAATCTCCCATTTTGGAATTTGCCTGCTGGGATTCCTTAGACTCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR CAA 90 bp AATTTGTCCACTTATATAAAAGGAACAGACCTCACCTGTCAGGTCTGTTTAGGGTTGTGGCTTTTTGTCTaGGTTAAGTGCCTAGGGATA +
Preference number: 5 (lower is better)
Translates to: NLSTYIKGTDLTCQVCLGLWLFV*VKCLGI
Trigger: TATCCCTAGGCACTTAACCAAGACAAAAAGCCACAA...CCCTAAACAGACCTGACAGGTGAGGTCTGTTCCTTTTATATAAGTGGACAAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR CAA 90 bp CAAGTTCCAATATCACTGTCTCTTTATCATCTAAATAGGGCCAGTTGGACACCTTTGTGGCTTTTTGTCTaGGTTAAGTGCCTAGGGATA +
Preference number: 5 (lower is better)
Translates to: QVPISLSLYHLNRASWTPLWLFV*VKCLGI
Trigger: TATCCCTAGGCACTTAACCAAGACAAAAAGCCACAA...AGGTGTCCAACTGGCCCTATTTAGATGATAAAGAGACAGTGATATTGGAACTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR CAA 90 bp TACAAAATGCGAATGGGAACATATGGATATGGAGTTTCTTACACTGTAACATTGCTAGCACCTTCTCATTaGCATACCCTGTGGAGCTCA +
Preference number: 5 (lower is better)
Translates to: YKMRMGTYGYGVSYTVTLLAPSH*HTLWSS
Trigger: TGAGCTCCACAGGGTATGCAAATGAGAAGGTGCTAG...CAATGTTACAGTGTAAGAAACTCCATATCCATATGTTCCCATTCGCATTTTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR CAA 90 bp TGCAGGATAAACAGTATTAGAAGATGCAATCGTAACATTGCTGACTTCAGGATGTTAAAAGAGGCCATATaGCATTCTGAAGGCCCCTCA +
Preference number: 5 (lower is better)
Translates to: CRINSIRRCNRNIADFRMLKEAI*HSEGPS
Trigger: TGAGGGGCCTTCAGAATGCAATATGGCCTCTTTTAA...CATCCTGAAGTCAGCAATGTTACGATTGCATCTTCTAATACTGTTTATCCTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR CAA 90 bp GAGTTTTCATTGTTTGTTCACCCAAATCTTTACGACAACAGAGAAGAATGCATTTCTTCCACCTCCGATTaGCCTTTTAGCTCTGTGTTC +
Preference number: 5 (lower is better)
Translates to: EFSLFVHPNLYDNREECISSTSD*PFSSVF
Trigger: GAACACAGAGCTAAAAGGCAAATCGGAGGTGGAAGA...AATGCATTCTTCTCTGTTGTCGTAAAGATTTGGGTGAACAAACAATGAAAACTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR CAA 90 bp TACAAAATGCGAATGGGAACATATGGATATGGAGTTTCTTACACTGTAACATTGTGTCCTCCTTCTGCATaGATTATAGCTGTGTCTGCG +
Preference number: 5 (lower is better)
Translates to: YKMRMGTYGYGVSYTVTLCPPSA*IIAVSA
Trigger: CGCAGACACAGCTATAATCAATGCAGAAGGAGGACA...CAATGTTACAGTGTAAGAAACTCCATATCCATATGTTCCCATTCGCATTTTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000542447.6
CDS-3UTR CAA 90 bp GAGTTTTCATTGTTTGTTCACCCAAATCTTTACGACAACAGAGAAGAATGCATTACCTCAGGGTTCCAGTaGATGTATTTGGAGAATGCC +
Preference number: 5 (lower is better)
Translates to: EFSLFVHPNLYDNREECITSGFQ*MYLENA
Trigger: GGCATTCTCCAAATACATCAACTGGAACCCTGAGGT...AATGCATTCTTCTCTGTTGTCGTAAAGATTTGGGTGAACAAACAATGAAAACTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS TCA 90 bp AACCCAAGTTCTTTCTGTTGTATCCTTACGAAAATCCAGTCTTCTTaGAAGTTGGAAGCTGGTCCTTTTATTCTTCTGTGCAATCTCAGA +
Preference number: 5 (lower is better)
Translates to: NPSSFCCILTKIQSS*KLEAGPFILLCNLR
Trigger: TCTGAGATTGCACAGAAGAATAAAAGGACCAGCTTCCAACTTTCAAGAAGACTGGATTTTCGTAAGGATACAACAGAAAGAACTTGGGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536781.1
CDS CCA 90 bp CTGTTGTATCCTTACGAAAATCCAGTCTTCTTGAAAGTTGGAAGCTaGTCCTTTTATTCTTCTGTGCAATCTCAGAGACTACACATACAA +
Preference number: 5 (lower is better)
Translates to: LLYPYENPVFLKVGS*SFYSSVQSQRLHIQ
Trigger: TTGTATGTGTAGTCTCTGAGATTGCACAGAAGAATAAAAGGACCAGCTTCCAACTTTCAAGAAGACTGGATTTTCGTAAGGATACAACAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536781.1
CDS CCA 90 bp GTTCTTTCTGTTGTATCCTTACGAAAATCCAGTCTTCTTGAAAGTTaGAAGCTGGTCCTTTTATTCTTCTGTGCAATCTCAGAGACTACA +
Preference number: 5 (lower is better)
Translates to: VLSVVSLRKSSLLES*KLVLLFFCAISETT
Trigger: TGTAGTCTCTGAGATTGCACAGAAGAATAAAAGGACCAGCTTCCAACTTTCAAGAAGACTGGATTTTCGTAAGGATACAACAGAAAGAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536781.1
CDS-3UTR CAA 90 bp AATGAAAGTTTCACACAGATTCGAGTTGGAAATCCCAGCATGACAAATATCTGTCATCTGAATGTGCACTaGAGGCTTATACTGTACTTC +
Preference number: 5 (lower is better)
Translates to: NESFTQIRVGNPSMTNICHLNVH*RLILYF
Trigger: GAAGTACAGTATAAGCCTCAAGTGCACATTCAGATG...ACAGATATTTGTCATGCTGGGATTTCCAACTCGAATCTGTGTGAAACTTTCATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR CAA 90 bp GAGTTTTCATTGTTTGTTCACCCAAATCTTTACGACAACAGAGAAGAATGCATTCACTGCTCTAAGTATTaGAAACATGGGCAGCAGCAA +
Preference number: 5 (lower is better)
Translates to: EFSLFVHPNLYDNREECIHCSKY*KHGQQQ
Trigger: TTGCTGCTGCCCATGTTTCAAATACTTAGAGCAGTG...AATGCATTCTTCTCTGTTGTCGTAAAGATTTGGGTGAACAAACAATGAAAACTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR CAA 90 bp AATGAAAGTTTCACACAGATTCGAGTTGGAAATCCCAGCATGACAAATATCTGTTTGTGGCTTTTTGTCTaGGTTAAGTGCCTAGGGATA +
Preference number: 5 (lower is better)
Translates to: NESFTQIRVGNPSMTNICLWLFV*VKCLGI
Trigger: TATCCCTAGGCACTTAACCAAGACAAAAAGCCACAA...ACAGATATTTGTCATGCTGGGATTTCCAACTCGAATCTGTGTGAAACTTTCATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR CAA 90 bp AATTTGTCCACTTATATAAAAGGAACAGACCTCACCTGTCAGGTCTGTTTAGGGAAAAAGGGATGTTCATaGTGGCTTTTTGTCTTGGTT +
Preference number: 5 (lower is better)
Translates to: NLSTYIKGTDLTCQVCLGKKGCS*WLFVLV
Trigger: AACCAAGACAAAAAGCCACAATGAACATCCCTTTTT...CCCTAAACAGACCTGACAGGTGAGGTCTGTTCCTTTTATATAAGTGGACAAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR CAA 90 bp GAAGGAAAAGAGTCTAAGGAATCCCAGCAGGCAAATTCCAAAATGGGAGATTTTAAAAAGGGATGTTCATaGTGGCTTTTTGTCTTGGTT +
Preference number: 5 (lower is better)
Translates to: EGKESKESQQANSKMGDFKKGCS*WLFVLV
Trigger: AACCAAGACAAAAAGCCACAATGAACATCCCTTTTT...AAAATCTCCCATTTTGGAATTTGCCTGCTGGGATTCCTTAGACTCTTTTCCTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS-3UTR CAA 90 bp AAAGAGTCTAAGGAATCCCAGCAGGCAAATTCCAAAATGGGAGATTTTGGAAAATTCTGGAGCTTACCTTaGCTTTTCCTATGGAACTTT +
Preference number: 5 (lower is better)
Translates to: KESKESQQANSKMGDFGKFWSLP*LFLWNF
Trigger: AAAGTTCCATAGGAAAAGCAAAGGTAAGCTCCAGAA...TTTTCCAAAATCTCCCATTTTGGAATTTGCCTGCTGGGATTCCTTAGACTCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS TCA 90 bp TCACTGTCTCTTTATCATCTAAATAGGGCCAGTTGGACACCTCATTaGAACAAAAAGGCTGATCTAGATGAAGTACTCTTTCTTTTCTTC +
Preference number: 5 (lower is better)
Translates to: SLSLYHLNRASWTPH*NKKADLDEVLFLFF
Trigger: GAAGAAAAGAAAGAGTACTTCATCTAGATCAGCCTTTTTGTTTCAATGAGGTGTCCAACTGGCCCTATTTAGATGATAAAGAGACAGTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000540852.1
ENST00000542447.6
ENST00000543375.5
ENST00000545380.5
ENST00000546000.1
CDS-3UTR CAA 90 bp GAGTTTTCATTGTTTGTTCACCCAAATCTTTACGACAACAGAGAAGAATGCATTCATCTGAATGTGCACTaGAGGCTTATACTGTACTTC +
Preference number: 5 (lower is better)
Translates to: EFSLFVHPNLYDNREECIHLNVH*RLILYF
Trigger: GAAGTACAGTATAAGCCTCAAGTGCACATTCAGATG...AATGCATTCTTCTCTGTTGTCGTAAAGATTTGGGTGAACAAACAATGAAAACTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
ENST00000545380.5
CDS-3UTR CAA 90 bp GAGTTTTCATTGTTTGTTCACCCAAATCTTTACGACAACAGAGAAGAATGCATTGTTTCTTTGAGGTTCTaGATGACAGAATCAAAGGAG +
Preference number: 5 (lower is better)
Translates to: EFSLFVHPNLYDNREECIVSLRF*MTESKE
Trigger: CTCCTTTGATTCTGTCATCAAGAACCTCAAAGAAAC...AATGCATTCTTCTCTGTTGTCGTAAAGATTTGGGTGAACAAACAATGAAAACTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR CAA 90 bp GAGTTTTCATTGTTTGTTCACCCAAATCTTTACGACAACAGAGAAGAATGCATTATACTAAGGCTTTGCTaGGCCATTACCCAAAATGAT +
Preference number: 5 (lower is better)
Translates to: EFSLFVHPNLYDNREECIILRLC*AITQND
Trigger: ATCATTTTGGGTAATGGCCAAGCAAAGCCTTAGTAT...AATGCATTCTTCTCTGTTGTCGTAAAGATTTGGGTGAACAAACAATGAAAACTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331581.11
ENST00000452722.7
CDS-3UTR CAA 90 bp TACAAAATGCGAATGGGAACATATGGATATGGAGTTTCTTACACTGTAACATTGAAAAAGGGATGTTCATaGTGGCTTTTTGTCTTGGTT +
Preference number: 5 (lower is better)
Translates to: YKMRMGTYGYGVSYTVTLKKGCS*WLFVLV
Trigger: AACCAAGACAAAAAGCCACAATGAACATCCCTTTTT...CAATGTTACAGTGTAAGAAACTCCATATCCATATGTTCCCATTCGCATTTTGTA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000542447.6
CDS-3UTR CAA 90 bp GAGTTTTCATTGTTTGTTCACCCAAATCTTTACGACAACAGAGAAGAATGCATTAAAAAGGGATGTTCATaGTGGCTTTTTGTCTTGGTT +
Preference number: 5 (lower is better)
Translates to: EFSLFVHPNLYDNREECIKKGCS*WLFVLV
Trigger: AACCAAGACAAAAAGCCACAATGAACATCCCTTTTT...AATGCATTCTTCTCTGTTGTCGTAAAGATTTGGGTGAACAAACAATGAAAACTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000542447.6
CDS CCA 72 bp CCGGGAGGCGCCGCCGCCGCCGCTGCCGCCGCACACTaGGATCCGCTCGGCAGCACTACACTCGCCATGTCG +
Preference number: 6 (lower is better)
Translates to: PGGAAAAAAAAH*DPLGSTTLAMS
Trigger: CGACATGGCGAGTGTAGTGCTGCCGAGCGGATCCCAGTGTGCGGCGGCAGCGGCGGCGGCGGCGCCTCCCGG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000536781.1
ENST00000537058.5
ENST00000537140.5
ENST00000540951.1
ENST00000542447.6
CDS GCA 72 bp CCGCTCGGCAGCACTACACTCGCCATGTCGGGCACCTaGCTCAGACTGGCGGCGTTGGCTGCCTCCGGAGCC +
Preference number: 6 (lower is better)
Translates to: PLGSTTLAMSGT*LRLAALAASGA
Trigger: GGCTCCGGAGGCAGCCAACGCCGCCAGTCTGAGGCAGGTGCCCGACATGGCGAGTGTAGTGCTGCCGAGCGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537140.5
ENST00000542447.6
CDS CCA 72 bp GCACTACACTCGCCATGTCGGGCACCTGCCTCAGACTaGCGGCGTTGGCTGCCTCCGGAGCCCGAGCGGACA +
Preference number: 6 (lower is better)
Translates to: ALHSPCRAPASD*RRWLPPEPERT
Trigger: TGTCCGCTCGGGCTCCGGAGGCAGCCAACGCCGCCAGTCTGAGGCAGGTGCCCGACATGGCGAGTGTAGTGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537140.5
ENST00000542447.6
CDS CCA 72 bp TCGCCATGTCGGGCACCTGCCTCAGACTGGCGGCGTTaGCTGCCTCCGGAGCCCGAGCGGACAGCTAATGAG +
Preference number: 6 (lower is better)
Translates to: SPCRAPASDWRR*LPPEPERTANE
Trigger: CTCATTAGCTGTCCGCTCGGGCTCCGGAGGCAGCCAACGCCGCCAGTCTGAGGCAGGTGCCCGACATGGCGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537140.5
ENST00000542447.6
CDS GCA 72 bp CATGTCGGGCACCTGCCTCAGACTGGCGGCGTTGGCTaGCTCCGGAGCCCGAGCGGACAGCTAATGAGATGC +
Preference number: 6 (lower is better)
Translates to: HVGHLPQTGGVG*LRSPSGQLMRC
Trigger: GCATCTCATTAGCTGTCCGCTCGGGCTCCGGAGGCAGCCAACGCCGCCAGTCTGAGGCAGGTGCCCGACATG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537140.5
ENST00000542447.6
CDS GCA 72 bp TACCGCTGGGTCTGCAGGTTTCCAGTGACCGCAGGGTaGTCCACCTGGCAGATCACTGGGACCCCATCGTCC +
Preference number: 6 (lower is better)
Translates to: YRWVCRFPVTAG*STWQITGTPSS
Trigger: GGACGATGGGGTCCCAGTGATCTGCCAGGTGGAGCACCCTGCGGTCACTGGAAACCTGCAGACCCAGCGGTA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000537140.5
ENST00000541434.5
ENST00000542447.6
ENST00000542450.5
ENST00000545380.5
ENST00000612235.4
ENST00000616271.4
CDS GCA 72 bp CACCGCCACGACGCCACCGATCACGGCATGATCCACTaGCCTGATCGAGCCTTCTTCACCTGCTCGGGAATC +
Preference number: 6 (lower is better)
Translates to: HRHDATDHGMIH*PDRAFFTCSGI
Trigger: GATTCCCGAGCAGGTGAAGAAGGCTCGATCAGGGCAGTGGATCATGCCGTGATCGGTGGCGTCGTGGCGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000537140.5
ENST00000540852.1
ENST00000542447.6
ENST00000543375.5
ENST00000545380.5
ENST00000545960.5
ENST00000546000.1
ENST00000612235.4
ENST00000616271.4
CDS TCA 72 bp AACACCACCACCGCCACGACGCCACCGATCACGGCATaGTCCACTGCCCTGATCGAGCCTTCTTCACCTGCT +
Preference number: 6 (lower is better)
Translates to: NTTTATTPPITA*STALIEPSSPA
Trigger: AGCAGGTGAAGAAGGCTCGATCAGGGCAGTGGATCATGCCGTGATCGGTGGCGTCGTGGCGGTGGTGGTGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000537140.5
ENST00000540852.1
ENST00000542447.6
ENST00000543375.5
ENST00000545380.5
ENST00000545960.5
ENST00000546000.1
ENST00000612235.4
ENST00000616271.4
CDS CCA 72 bp TCCAGTGACCGCAGGGTGCTCCACCTGGCAGATCACTaGGACCCCATCGTCCTCCTTGTGCACCTTCAGCAT +
Preference number: 6 (lower is better)
Translates to: SSDRRVLHLADH*DPIVLLVHLQH
Trigger: ATGCTGAAGGTGCACAAGGAGGACGATGGGGTCCCAGTGATCTGCCAGGTGGAGCACCCTGCGGTCACTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000537140.5
ENST00000541434.5
ENST00000542447.6
ENST00000542450.5
ENST00000545380.5
ENST00000612235.4
ENST00000616271.4
CDS TCA 72 bp CCACGACGCCACCGATCACGGCATGATCCACTGCCCTaGTCGAGCCTTCTTCACCTGCTCGGGAATCTGAGA +
Preference number: 6 (lower is better)
Translates to: PRRHRSRHDPLP*SSLLHLLGNLR
Trigger: TCTCAGATTCCCGAGCAGGTGAAGAAGGCTCGATCAGGGCAGTGGATCATGCCGTGATCGGTGGCGTCGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331581.11
ENST00000536727.5
ENST00000540852.1
ENST00000545960.5
CDS TCA 72 bp CCACGACGCCACCGATCACGGCATGATCCACTGCCCTaGTCGAGCCTTCTTCACCTGCTCGGGAATCGTGAA +
Preference number: 6 (lower is better)
Translates to: PRRHRSRHDPLP*SSLLHLLGNRE
Trigger: TTCACGATTCCCGAGCAGGTGAAGAAGGCTCGATCAGGGCAGTGGATCATGCCGTGATCGGTGGCGTCGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537058.5
ENST00000616271.4
CDS TCA 72 bp CCACGACGCCACCGATCACGGCATGATCCACTGCCCTaGTCGAGCCTTCTTCACCTGCTCGGGAATCTAAGC +
Preference number: 6 (lower is better)
Translates to: PRRHRSRHDPLP*SSLLHLLGNLS
Trigger: GCTTAGATTCCCGAGCAGGTGAAGAAGGCTCGATCAGGGCAGTGGATCATGCCGTGATCGGTGGCGTCGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543375.5
CDS GCA 72 bp GAGCCCGAGCGGACAGCTAATGAGATGCTAATGACATaGGCTGGAGGCGGAGTCCGGGCAGACCAATCACAG +
Preference number: 6 (lower is better)
Translates to: EPERTANEMLMT*AGGGVRADQSQ
Trigger: CTGTGATTGGTCTGCCCGGACTCCGCCTCCAGCGCATGTCATTAGCATCTCATTAGCTGTCCGCTCGGGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537140.5
ENST00000542447.6
CDS TCA 72 bp GTACTTCTAGATACCGCTGGGTCTGCAGGTTTCCAGTaGCCGCAGGGTGCTCCACCTGGCAGATCACTGGGA +
Preference number: 6 (lower is better)
Translates to: VLLDTAGSAGFQ*PQGAPPGRSLG
Trigger: TCCCAGTGATCTGCCAGGTGGAGCACCCTGCGGTCACTGGAAACCTGCAGACCCAGCGGTATCTAGAAGTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000537140.5
ENST00000541434.5
ENST00000542447.6
ENST00000542450.5
ENST00000545380.5
ENST00000612235.4
ENST00000616271.4
CDS TCA 72 bp CCACGACGCCACCGATCACGGCATGATCCACTGCCCTaGTCGAGCCTTCTTCACCTGCTCGGGAATCGTATA +
Preference number: 6 (lower is better)
Translates to: PRRHRSRHDPLP*SSLLHLLGNRI
Trigger: TATACGATTCCCGAGCAGGTGAAGAAGGCTCGATCAGGGCAGTGGATCATGCCGTGATCGGTGGCGTCGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000537140.5
ENST00000542447.6
ENST00000545380.5
ENST00000612235.4
CDS TCA 72 bp CCACGACGCCACCGATCACGGCATGATCCACTGCCCTaGTCGAGCCTTCTTCACCTGCTCGGGAATCTGTTA +
Preference number: 6 (lower is better)
Translates to: PRRHRSRHDPLP*SSLLHLLGNLL
Trigger: TAACAGATTCCCGAGCAGGTGAAGAAGGCTCGATCAGGGCAGTGGATCATGCCGTGATCGGTGGCGTCGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546000.1
CDS GCA 72 bp CCCTCGATCACTGTCACGTCTTTCGTAAACAGATTCTaGCCATCACCTGTGGGGATCAGTGCCGCGGCGGAG +
Preference number: 6 (lower is better)
Translates to: PSITVTSFVNRF*PSPVGISAAAE
Trigger: CTCCGCCGCGGCACTGATCCCCACAGGTGATGGGCAGAATCTGTTTACGAAAGACGTGACAGTGATCGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000537140.5
ENST00000541434.5
ENST00000542447.6
ENST00000545380.5
CDS TCA 72 bp TGTCACGTCTTTCGTAAACAGATTCTGCCCATCACCTaGGCACGGGAAGGCCGAGGCTGCAGTGAGCCGAGA +
Preference number: 6 (lower is better)
Translates to: CHVFRKQILPIT*AREGRGCSEPR
Trigger: TCTCGGCTCACTGCAGCCTCGGCCTTCCCGTGCTCAGGTGATGGGCAGAATCTGTTTACGAAAGACGTGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540951.1
CDS CCA 72 bp TCACCCAAGTTACCATCACAGGCTGGGGCTTCCCGATaGCTTCACATGTTAACTCAAGCGCGTCCCCTTCCC +
Preference number: 6 (lower is better)
Translates to: SPKLPSQAGASR*LHMLTQARPLP
Trigger: GGGAAGGGGACGCGCTTGAGTTAACATGTGAAGCCATCGGGAAGCCCCAGCCTGTGATGGTAACTTGGGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000537140.5
ENST00000540373.1
ENST00000541434.5
ENST00000542447.6
ENST00000545380.5
ENST00000612235.4
ENST00000616271.4
CDS TCA 72 bp ACCCCATCGTCCTCCTTGTGCACCTTCAGCATCAGCTaGCTGGTCACAGTGTACATGTCTGACCACTCTTCC +
Preference number: 6 (lower is better)
Translates to: TPSSSLCTFSIS*LVTVYMSDHSS
Trigger: GGAAGAGTGGTCAGACATGTACACTGTGACCAGTCAGCTGATGCTGAAGGTGCACAAGGAGGACGATGGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000537140.5
ENST00000541434.5
ENST00000542447.6
ENST00000542450.5
ENST00000543540.5
ENST00000545380.5
ENST00000612235.4
ENST00000616271.4
CDS GCA 72 bp GGCATGATCCACTGCCCTGATCGAGCCTTCTTCACCTaGTCGGGAATCTGTGATGATGGTAAGGATGGTGGT +
Preference number: 6 (lower is better)
Translates to: GMIHCPDRAFFT*SGICDDGKDGG
Trigger: ACCACCATCCTTACCATCATCACAGATTCCCGAGCAGGTGAAGAAGGCTCGATCAGGGCAGTGGATCATGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452722.7
CDS CAA 72 bp ATAGTCGTGGCTGGCTTGCTGGCCATAGCAGTGCAGTaGACTTCAATCTCCTCACCTTCCACCGCAGTGTCT +
Preference number: 6 (lower is better)
Translates to: IVVAGLLAIAVQ*TSISSPSTAVS
Trigger: AGACACTGCGGTGGAAGGTGAGGAGATTGAAGTCAACTGCACTGCTATGGCCAGCAAGCCAGCCACGACTAT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000537140.5
ENST00000541434.5
ENST00000542447.6
ENST00000542450.5
ENST00000543249.1
ENST00000543540.5
ENST00000545094.5
ENST00000545380.5
ENST00000612235.4
ENST00000616271.4
CDS CAA 72 bp TCCACCTCCGATTTGCCTTTTAGCTCTGTGTTCCCTTaGAACCACCTGATAGTCGTGGCTGGCTTGCTGGCC +
Preference number: 6 (lower is better)
Translates to: STSDLPFSSVFP*NHLIVVAGLLA
Trigger: GGCCAGCAAGCCAGCCACGACTATCAGGTGGTTCAAAGGGAACACAGAGCTAAAAGGCAAATCGGAGGTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000537140.5
ENST00000541434.5
ENST00000542447.6
ENST00000542450.5
ENST00000543249.1
ENST00000543540.5
ENST00000545094.5
ENST00000545380.5
ENST00000612235.4
ENST00000616271.4
CDS CAA 72 bp ATTCTGCCCATCACCTTGCACCGAAGGAATAGATCTTaGGGAACGGGGGCTGTGCGGGAGTGGAGAGTAAGA +
Preference number: 6 (lower is better)
Translates to: ILPITLHRRNRS*GTGAVREWRVR
Trigger: TCTTACTCTCCACTCCCGCACAGCCCCCGTTCCCAAAGATCTATTCCTTCGGTGCAAGGTGATGGGCAGAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543249.1
CDS CCA 72 bp CATCGTCCTCCTTGTGCACCTTCAGCATCAGCTGACTaGTCACAGTGTACATGTCTGACCACTCTTCCACCT +
Preference number: 6 (lower is better)
Translates to: HRPPCAPSASAD*SQCTCLTTLPP
Trigger: AGGTGGAAGAGTGGTCAGACATGTACACTGTGACCAGTCAGCTGATGCTGAAGGTGCACAAGGAGGACGATG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000537140.5
ENST00000541434.5
ENST00000542447.6
ENST00000542450.5
ENST00000543540.5
ENST00000545094.5
ENST00000545380.5
ENST00000612235.4
ENST00000616271.4
CDS CAA 72 bp GTGTTCCCTTTGAACCACCTGATAGTCGTGGCTGGCTaGCTGGCCATAGCAGTGCAGTTGACTTCAATCTCC +
Preference number: 6 (lower is better)
Translates to: VFPLNHLIVVAG*LAIAVQLTSIS
Trigger: GGAGATTGAAGTCAACTGCACTGCTATGGCCAGCAAGCCAGCCACGACTATCAGGTGGTTCAAAGGGAACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000537140.5
ENST00000541434.5
ENST00000542447.6
ENST00000542450.5
ENST00000543249.1
ENST00000543540.5
ENST00000545094.5
ENST00000545380.5
ENST00000612235.4
ENST00000616271.4
CDS CAA 90 bp AACCACCTGATAGTCGTGGCTGGCTTGCTGGCCATAGCAGTGCAGTaGACTTCAATCTCCTCACCTTCCACCGCAGTGTCTTTCTGGATA +
Preference number: 6 (lower is better)
Translates to: NHLIVVAGLLAIAVQ*TSISSPSTAVSFWI
Trigger: TATCCAGAAAGACACTGCGGTGGAAGGTGAGGAGATTGAAGTCAACTGCACTGCTATGGCCAGCAAGCCAGCCACGACTATCAGGTGGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000537140.5
ENST00000541434.5
ENST00000542447.6
ENST00000542450.5
ENST00000543249.1
ENST00000543540.5
ENST00000545094.5
ENST00000545380.5
ENST00000612235.4
ENST00000616271.4
CDS CAA 90 bp TTTAGCTCTGTGTTCCCTTTGAACCACCTGATAGTCGTGGCTGGCTaGCTGGCCATAGCAGTGCAGTTGACTTCAATCTCCTCACCTTCC +
Preference number: 6 (lower is better)
Translates to: FSSVFPLNHLIVVAG*LAIAVQLTSISSPS
Trigger: GGAAGGTGAGGAGATTGAAGTCAACTGCACTGCTATGGCCAGCAAGCCAGCCACGACTATCAGGTGGTTCAAAGGGAACACAGAGCTAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000537140.5
ENST00000541434.5
ENST00000542447.6
ENST00000542450.5
ENST00000543249.1
ENST00000543540.5
ENST00000545094.5
ENST00000545380.5
ENST00000612235.4
ENST00000616271.4
CDS TCA 72 bp TTGATGAACAGGTTGGGCCCAGACAGTACGGCGTGTTaGGGCATTTCATCATCGACTCTCACCCAAGTTACC +
Preference number: 6 (lower is better)
Translates to: LMNRLGPDSTAC*GISSSTLTQVT
Trigger: GGTAACTTGGGTGAGAGTCGATGATGAAATGCCTCAACACGCCGTACTGTCTGGGCCCAACCTGTTCATCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000537140.5
ENST00000540373.1
ENST00000541434.5
ENST00000542447.6
ENST00000545380.5
ENST00000612235.4
ENST00000616271.4
CDS CCA 72 bp CTCTGTGTTCCCTTTGAACCACCTGATAGTCGTGGCTaGCTTGCTGGCCATAGCAGTGCAGTTGACTTCAAT +
Preference number: 6 (lower is better)
Translates to: LCVPFEPPDSRG*LAGHSSAVDFN
Trigger: ATTGAAGTCAACTGCACTGCTATGGCCAGCAAGCCAGCCACGACTATCAGGTGGTTCAAAGGGAACACAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000537140.5
ENST00000541434.5
ENST00000542447.6
ENST00000542450.5
ENST00000543249.1
ENST00000543540.5
ENST00000545094.5
ENST00000545380.5
ENST00000612235.4
ENST00000616271.4
CDS CCA 72 bp ACTTCAATCTCCTCACCTTCCACCGCAGTGTCTTTCTaGATATCGATCATCAGATTACGTGGTGGGACCAGG +
Preference number: 6 (lower is better)
Translates to: TSISSPSTAVSF*ISIIRLRGGTR
Trigger: CCTGGTCCCACCACGTAATCTGATGATCGATATCCAGAAAGACACTGCGGTGGAAGGTGAGGAGATTGAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000537140.5
ENST00000541434.5
ENST00000542447.6
ENST00000542450.5
ENST00000543249.1
ENST00000543540.5
ENST00000545094.5
ENST00000545380.5
ENST00000612235.4
ENST00000616271.4
CDS CAA 72 bp ATTGATGAACAGGTTGGGCCCAGACAGTACGGCGTGTaGAGGCATTTCATCATCGACTCTCACCCAAGTTAC +
Preference number: 6 (lower is better)
Translates to: IDEQVGPRQYGV*RHFIIDSHPSY
Trigger: GTAACTTGGGTGAGAGTCGATGATGAAATGCCTCAACACGCCGTACTGTCTGGGCCCAACCTGTTCATCAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000537140.5
ENST00000540373.1
ENST00000541434.5
ENST00000542447.6
ENST00000545380.5
ENST00000612235.4
ENST00000616271.4
CDS CAA 72 bp TCTGCCCATCACCACTGGTATGTCCAGATGCCTTCATaGCAATGGGAGCAGATCTCTGAACAGTTTTCTGCT +
Preference number: 6 (lower is better)
Translates to: SAHHHWYVQMPS*QWEQISEQFSA
Trigger: AGCAGAAAACTGTTCAGAGATCTGCTCCCATTGCAATGAAGGCATCTGGACATACCAGTGGTGATGGGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545094.5
CDS CAA 90 bp AAGTACTCTTTCTTTTCTTCGGAGTTGTTCTGTCCTCCTTCTGCATaGATTATAGCTGTGTCTGCGTCTGCTGCGTCATCGGCTCCTTTG +
Preference number: 6 (lower is better)
Translates to: KYSFFSSELFCPPSA*IIAVSASAASSAPL
Trigger: CAAAGGAGCCGATGACGCAGCAGACGCAGACACAGCTATAATCAATGCAGAAGGAGGACAGAACAACTCCGAAGAAAAGAAAGAGTACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000331581.11
ENST00000452722.7
ENST00000536727.5
ENST00000537058.5
ENST00000540852.1
ENST00000542447.6
ENST00000543375.5
ENST00000545380.5
ENST00000546000.1
ENST00000616271.4
CDS CAA 90 bp CCTTCTTCACCTGCTCGGGAATCTAAGCAGCATACATCTGATCACTaGGCCATATTATGGAAACTCTTACTTCCACCACCAGCCATGAGT +
Preference number: 6 (lower is better)
Translates to: PSSPARESKQHTSDH*AILWKLLLPPPAMS
Trigger: ACTCATGGCTGGTGGTGGAAGTAAGAGTTTCCATAATATGGCCAAGTGATCAGATGTATGCTGCTTAGATTCCCGAGCAGGTGAAGAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543375.5
CDS TCA 72 bp ACAGTCCCAATGTATAGGCAGTTCATCGTGTGTGAGTaGGTGACTCTTTGGGATCTCGATGAAATCCTGGGA +
Preference number: 6 (lower is better)
Translates to: TVPMYRQFIVCE*VTLWDLDEILG
Trigger: TCCCAGGATTTCATCGAGATCCCAAAGAGTCACTCACTCACACACGATGAACTGCCTATACATTGGGACTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542450.5
CDS TCA 72 bp AGTCACAGAGAACAATCGAGATGGATCAAGTTACACTaGGGTAACAGGCTGACCTGTCCAGTGCTGAATCGA +
Preference number: 6 (lower is better)
Translates to: SHREQSRWIKLH*GNRLTCPVLNR
Trigger: TCGATTCAGCACTGGACAGGTCAGCCTGTTACCTCAGTGTAACTTGATCCATCTCGATTGTTCTCTGTGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546000.1
CDS GCA 72 bp AAACAGATTCTGCCCATCACCACTGGTATGTCCAGATaGCTTCATTGCAATGGGAGCAGATCTCTGAACAGT +
Preference number: 6 (lower is better)
Translates to: KQILPITTGMSR*LHCNGSRSLNS
Trigger: ACTGTTCAGAGATCTGCTCCCATTGCAATGAAGGCATCTGGACATACCAGTGGTGATGGGCAGAATCTGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545094.5
CDS CCA 72 bp AGAAATTATCTAGTTTCTTTTGTCAAGCCAATCCCCTaGCCCAGACCAGACCAGAACAGAGCACACATGAGA +
Preference number: 6 (lower is better)
Translates to: RNYLVSFVKPIP*PRPDQNRAHMR
Trigger: TCTCATGTGTGCTCTGTTCTGGTCTGGTCTGGGCCAGGGGATTGGCTTGACAAAAGAAACTAGATAATTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536781.1
CDS GCA 72 bp CAAATGATATCATCAGGCAAAATCAGACTCACACACTaGCTCAAAACCACAGTACCAGCACTTACTCTCTCC +
Preference number: 6 (lower is better)
Translates to: QMISSGKIRLTH*LKTTVPALTLS
Trigger: GGAGAGAGTAAGTGCTGGTACTGTGGTTTTGAGGCAGTGTGTGAGTCTGATTTTGCCTGATGATATCATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540373.1
CDS CCA 72 bp GTGGAGAGTTTTCCCTTCTTCCCATTAGCAGAAATTTaGTTCACGCCGTTAGACAGTAGCACATTGTTTCCA +
Preference number: 6 (lower is better)
Translates to: VESFPFFPLAEI*FTPLDSSTLFP
Trigger: TGGAAACAATGTGCTACTGTCTAACGGCGTGAACCAAATTTCTGCTAATGGGAAGAAGGGAAAACTCTCCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543375.5
CDS CCA 72 bp AATTGCAACACTATAGCTGCCCTCATCACTTTATTCTaGGAGAGGAGGTTAGAGAAAACAGGCCTTTATGTC +
Preference number: 6 (lower is better)
Translates to: NCNTIAALITLF*ERRLEKTGLYV
Trigger: GACATAAAGGCCTGTTTTCTCTAACCTCCTCTCCCAGAATAAAGTGATGAGGGCAGCTATAGTGTTGCAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537140.5
ENST00000545960.5
CDS CCA 72 bp TCTAAGCAGCATACATCTGATCACTTGGCCATATTATaGAAACTCTTACTTCCACCACCAGCCATGAGTTCA +
Preference number: 6 (lower is better)
Translates to: SKQHTSDHLAIL*KLLLPPPAMSS
Trigger: TGAACTCATGGCTGGTGGTGGAAGTAAGAGTTTCCATAATATGGCCAAGTGATCAGATGTATGCTGCTTAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543375.5
CDS CAA 90 bp TTCCCATTAGCAGAAATTTGGTTCACGCCGTTAGACAGTAGCACATaGTTTCCAAACTGCATATCAAGGCTGAAACACAATCTTCAGGTC +
Preference number: 6 (lower is better)
Translates to: FPLAEIWFTPLDSST*FPNCISRLKHNLQV
Trigger: GACCTGAAGATTGTGTTTCAGCCTTGATATGCAGTTTGGAAACAATGTGCTACTGTCTAACGGCGTGAACCAAATTTCTGCTAATGGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543375.5
CDS CAA 72 bp CCCAAAGGTAACTTGTCCTCTCCTGCGTTAATTAAATaGTCCCCATTCCGAAATATAAATATCGCTACCACA +
Preference number: 6 (lower is better)
Translates to: PKGNLSSPALIK*SPFRNINIATT
Trigger: TGTGGTAGCGATATTTATATTTCGGAATGGGGACAATTTAATTAACGCAGGAGAGGACAAGTTACCTTTGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441886.2
CDS TCA 72 bp TCTTTCTGTTGTATCCTTACGAAAATCCAGTCTTCTTaGAAGTTGGAAGCTGGTCCTTTTATTCTTCTGTGC +
Preference number: 6 (lower is better)
Translates to: SFCCILTKIQSS*KLEAGPFILLC
Trigger: GCACAGAAGAATAAAAGGACCAGCTTCCAACTTTCAAGAAGACTGGATTTTCGTAAGGATACAACAGAAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536781.1