Pregenerated sensors for CACYBP (Homo sapiens)
Ensembl gene IDs: ENSG00000116161Ensembl transcript IDs: ENST00000367679.7, ENST00000405362.1, ENST00000426793.1, ENST00000461977.1, ENST00000469173.1, ENST00000483307.1, ENST00000613570.4
Found 102 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | ATGGAGATCACAGGCACTGGTCCTGACTTCAGGGGGAATAGGAGTAATTCCTACGTGCATGGTAATGCATaGCATATACATTGCTTAAGG | + |
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Preference number: 2 (lower is better) Translates to: MEITGTGPDFRGNRSNSYVHGNA*HIHCLR Trigger: CCTTAAGCAATGTATATGCCATGCATTACCATGCAC...GTAGGAATTACTCCTATTCCCCCTGAAGTCAGGACCAGTGCCTGTGATCTCCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000367679.7 ENST00000613570.4 |
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| 3UTR-3UTR CCA 90 bp | GATCGTCAGGCGGCTTGGAATATATCTATATGCCTATTTTCAGTTATCTTAGTATCCAGCCTTAGTAGCTaGGATTACGGGCGCCAGCCT | + |
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Preference number: 2 (lower is better) Translates to: DRQAAWNISICLFSVILVSSLSS*DYGRQP Trigger: AGGCTGGCGCCCGTAATCCCAGCTACTAAGGCTGGA...TACTAAGATAACTGAAAATAGGCATATAGATATATTCCAAGCCGCCTGACGATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000367679.7 ENST00000613570.4 |
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| 3UTR-3UTR CCA 90 bp | TTAGATCGTCAGGCGGCTTGGAATATATCTATATGCCTATTTTCAGTTATCTTAGCAGCCTTAAACTCCTaGGCTGAAGTGATCCTCCAG | + |
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Preference number: 2 (lower is better) Translates to: LDRQAAWNISICLFSVILAALNS*AEVILQ Trigger: CTGGAGGATCACTTCAGCCCAGGAGTTTAAGGCTGC...TAAGATAACTGAAAATAGGCATATAGATATATTCCAAGCCGCCTGACGATCTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000367679.7 ENST00000613570.4 |
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| 3UTR-3UTR GCA 90 bp | GATCGTCAGGCGGCTTGGAATATATCTATATGCCTATTTTCAGTTATCTTAGTAATCATCATAGCTCACTaGAGCCTTAAACTCCTGGGC | + |
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Preference number: 2 (lower is better) Translates to: DRQAAWNISICLFSVILVIIIAH*SLKLLG Trigger: GCCCAGGAGTTTAAGGCTGCAGTGAGCTATGATGAT...TACTAAGATAACTGAAAATAGGCATATAGATATATTCCAAGCCGCCTGACGATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000367679.7 ENST00000613570.4 |
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| 3UTR-3UTR CCA 90 bp | TTAGATCGTCAGGCGGCTTGGAATATATCTATATGCCTATTTTCAGTTATCTTAGCCAGCCTTCATGCCTaGCTTCAATTGCTTTCTCTG | + |
|
Preference number: 2 (lower is better) Translates to: LDRQAAWNISICLFSVILASLHA*LQLLSL Trigger: CAGAGAAAGCAATTGAAGCCAGGCATGAAGGCTGGC...TAAGATAACTGAAAATAGGCATATAGATATATTCCAAGCCGCCTGACGATCTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000367679.7 ENST00000613570.4 |
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| 3UTR-3UTR GCA 90 bp | TTAGATCGTCAGGCGGCTTGGAATATATCTATATGCCTATTTTCAGTTATCTTAATCATCATAGCTCACTaGAGCCTTAAACTCCTGGGC | + |
|
Preference number: 2 (lower is better) Translates to: LDRQAAWNISICLFSVILIIIAH*SLKLLG Trigger: GCCCAGGAGTTTAAGGCTGCAGTGAGCTATGATGAT...TAAGATAACTGAAAATAGGCATATAGATATATTCCAAGCCGCCTGACGATCTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000367679.7 ENST00000613570.4 |
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| 3UTR-3UTR CCA 90 bp | GATCGTCAGGCGGCTTGGAATATATCTATATGCCTATTTTCAGTTATCTTAGTACAATTTTTACACTGGTaGAAGCTGATGTCAGTAACT | + |
|
Preference number: 2 (lower is better) Translates to: DRQAAWNISICLFSVILVQFLHW*KLMSVT Trigger: AGTTACTGACATCAGCTTCCACCAGTGTAAAAATTG...TACTAAGATAACTGAAAATAGGCATATAGATATATTCCAAGCCGCCTGACGATC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000367679.7 ENST00000613570.4 |
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| 3UTR-3UTR GCA 90 bp | TTAGATCGTCAGGCGGCTTGGAATATATCTATATGCCTATTTTCAGTTATCTTACATATGCATTGTGTCTaGTATTCTGTTCATGTGTCA | + |
|
Preference number: 2 (lower is better) Translates to: LDRQAAWNISICLFSVILHMHCV*YSVHVS Trigger: TGACACATGAACAGAATAGCAGACACAATGCATATG...TAAGATAACTGAAAATAGGCATATAGATATATTCCAAGCCGCCTGACGATCTAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000367679.7 ENST00000613570.4 |
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| 3UTR-3UTR CCA 90 bp | TTAGATCGTCAGGCGGCTTGGAATATATCTATATGCCTATTTTCAGTTATCTTACACGGCAAAACTAACTaGTACCATACAAAGATATGT | + |
|
Preference number: 2 (lower is better) Translates to: LDRQAAWNISICLFSVILHGKTN*YHTKIC Trigger: ACATATCTTTGTATGGTACCAGTTAGTTTTGCCGTG...TAAGATAACTGAAAATAGGCATATAGATATATTCCAAGCCGCCTGACGATCTAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000367679.7 ENST00000613570.4 |
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| 3UTR-3UTR CAA 90 bp | ATGGAGATCACAGGCACTGGTCCTGACTTCAGGGGGAATAGGAGTAATTCCTACTGCATGGCATATACATaGCTTAAGGTGGTAATAAGG | + |
|
Preference number: 3 (lower is better) Translates to: MEITGTGPDFRGNRSNSYCMAYT*LKVVIR Trigger: CCTTATTACCACCTTAAGCAATGTATATGCCATGCA...GTAGGAATTACTCCTATTCCCCCTGAAGTCAGGACCAGTGCCTGTGATCTCCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000367679.7 ENST00000613570.4 |
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| 3UTR-3UTR CAA 90 bp | GATCGTCAGGCGGCTTGGAATATATCTATATGCCTATTTTCAGTTATCTTAGTATCTGATCTAACTGTGTaGGCTAATACCTCCAGGAAA | + |
|
Preference number: 3 (lower is better) Translates to: DRQAAWNISICLFSVILVSDLTV*ANTSRK Trigger: TTTCCTGGAGGTATTAGCCAACACAGTTAGATCAGA...TACTAAGATAACTGAAAATAGGCATATAGATATATTCCAAGCCGCCTGACGATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000367679.7 ENST00000613570.4 |
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| 3UTR CCA 72 bp | TTAATTATTGGAATCCTGTCAATACATTGTTTGCCTTaGGTTATGGTGGGGTTTTTCTTGTCCTATAAACAT | + |
|
Preference number: 3 (lower is better) Translates to: LIIGILSIHCLP*VMVGFFLSYKH Trigger: ATGTTTATAGGACAAGAAAAACCCCACCATAACCCAAGGCAAACAATGTATTGACAGGATTCCAATAATTAA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000367679.7 ENST00000613570.4 |
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| CDS-3UTR CCA 90 bp | ATGGAGATCACAGGCACTGGTCCTGACTTCAGGGGGAATAGGAGTAATTCCTACGGCCGCCGTAGGAGGTaGAGCTACGTTGGCCTCGTG | + |
|
Preference number: 4 (lower is better) Translates to: MEITGTGPDFRGNRSNSYGRRRR*SYVGLV Trigger: CACGAGGCCAACGTAGCTCCACCTCCTACGGCGGCC...GTAGGAATTACTCCTATTCCCCCTGAAGTCAGGACCAGTGCCTGTGATCTCCAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000613570.4 |
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| CDS-3UTR CCA 90 bp | ATGGAGATCACAGGCACTGGTCCTGACTTCAGGGGGAATAGGAGTAATTCCTACGTGAGTTTGGCGCGGTaGAGACGTCACCGCGGTCTA | + |
|
Preference number: 4 (lower is better) Translates to: MEITGTGPDFRGNRSNSYVSLAR*RRHRGL Trigger: TAGACCGCGGTGACGTCTCCACCGCGCCAAACTCAC...GTAGGAATTACTCCTATTCCCCCTGAAGTCAGGACCAGTGCCTGTGATCTCCAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000613570.4 |
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| CDS-3UTR GCA 90 bp | GATCGTCAGGCGGCTTGGAATATATCTATATGCCTATTTTCAGTTATCTTAGTACACGAGTCGCGGCGCTaGAGCCTGCGCCCACACCGA | + |
|
Preference number: 4 (lower is better) Translates to: DRQAAWNISICLFSVILVHESRR*SLRPHR Trigger: TCGGTGTGGGCGCAGGCTGCAGCGCCGCGACTCGTG...TACTAAGATAACTGAAAATAGGCATATAGATATATTCCAAGCCGCCTGACGATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367679.7 |
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| CDS-3UTR GCA 90 bp | TGGAGATCACAGGCACTGGTCCTGACTTCAGGGGGAATAGGAGTAATTCCTACTGGAGTTACAGGCATCTaGCACCATGCCCAGCTAGTT | + |
|
Preference number: 4 (lower is better) Translates to: WRSQALVLTSGGIGVIPTGVTGI*HHAQLV Trigger: AACTAGCTGGGCATGGTGGCAGATGCCTGTAACTCC...AGTAGGAATTACTCCTATTCCCCCTGAAGTCAGGACCAGTGCCTGTGATCTCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000367679.7 |
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| CDS-3UTR CCA 90 bp | ATGGAGATCACAGGCACTGGTCCTGACTTCAGGGGGAATAGGAGTAATTCCTACGCAGCCTTAAACTCCTaGGCTGAAGTGATCCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: MEITGTGPDFRGNRSNSYAALNS*AEVILQ Trigger: CTGGAGGATCACTTCAGCCCAGGAGTTTAAGGCTGC...GTAGGAATTACTCCTATTCCCCCTGAAGTCAGGACCAGTGCCTGTGATCTCCAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000367679.7 ENST00000613570.4 |
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| CDS-3UTR CCA 90 bp | CAGATGCTCTACAGCAACCTTCAAGCACAGGCACCGATTTGCATTTTATGCAAAGTGATCCGCCCACCTTaGCCTCCCAAGGTGTTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: QMLYSNLQAQAPICILCKVIRPP*PPKVLG Trigger: TCCCAACACCTTGGGAGGCCAAGGTGGGCGGATCAC...TTTGCATAAAATGCAAATCGGTGCCTGTGCTTGAAGGTTGCTGTAGAGCATCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367679.7 |
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| CDS-3UTR TCA 90 bp | TGGAGATCACAGGCACTGGTCCTGACTTCAGGGGGAATAGGAGTAATTCCTACTCTTAAACTCCTGGGCTaGAGTGATCCTCCAGCCTTA | + |
|
Preference number: 4 (lower is better) Translates to: WRSQALVLTSGGIGVIPTLKLLG*SDPPAL Trigger: TAAGGCTGGAGGATCACTTCAGCCCAGGAGTTTAAG...AGTAGGAATTACTCCTATTCCCCCTGAAGTCAGGACCAGTGCCTGTGATCTCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000367679.7 ENST00000613570.4 |
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| CDS-3UTR CCA 90 bp | CAGATGCTCTACAGCAACCTTCAAGCACAGGCACCGATTTGCATTTTATGCAAACTAACAGTTCCGACGTaGTGGCGTCATCACTGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: QMLYSNLQAQAPICILCKLTVPT*WRHHWP Trigger: CGGCCAGTGATGACGCCACCACGTCGGAACTGTTAG...TTTGCATAAAATGCAAATCGGTGCCTGTGCTTGAAGGTTGCTGTAGAGCATCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000613570.4 |
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| CDS-3UTR GCA 90 bp | GATCGTCAGGCGGCTTGGAATATATCTATATGCCTATTTTCAGTTATCTTAGTAGCCGAAGTCCCGAGCTaGAGCCGCGCAGAAGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: DRQAAWNISICLFSVILVAEVPS*SRAEGG Trigger: TCCTCCTTCTGCGCGGCTGCAGCTCGGGACTTCGGC...TACTAAGATAACTGAAAATAGGCATATAGATATATTCCAAGCCGCCTGACGATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367679.7 |
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| CDS-3UTR GCA 90 bp | TGGAGATCACAGGCACTGGTCCTGACTTCAGGGGGAATAGGAGTAATTCCTACTATCATCATAGCTCACTaGAGCCTTAAACTCCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: WRSQALVLTSGGIGVIPTIIIAH*SLKLLG Trigger: GCCCAGGAGTTTAAGGCTGCAGTGAGCTATGATGAT...AGTAGGAATTACTCCTATTCCCCCTGAAGTCAGGACCAGTGCCTGTGATCTCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000367679.7 ENST00000613570.4 |
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| CDS-3UTR TCA 90 bp | TTAGATCGTCAGGCGGCTTGGAATATATCTATATGCCTATTTTCAGTTATCTTAGCTACGTTGGCCTCGTaGCCGGGCCCTGTAGCGGAA | + |
|
Preference number: 4 (lower is better) Translates to: LDRQAAWNISICLFSVILATLAS*PGPVAE Trigger: TTCCGCTACAGGGCCCGGTCACGAGGCCAACGTAGC...TAAGATAACTGAAAATAGGCATATAGATATATTCCAAGCCGCCTGACGATCTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000613570.4 |
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| CDS-3UTR CCA 90 bp | CAGATGCTCTACAGCAACCTTCAAGCACAGGCACCGATTTGCATTTTATGCAAAGCAGCCTTAAACTCCTaGGCTGAAGTGATCCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: QMLYSNLQAQAPICILCKAALNS*AEVILQ Trigger: CTGGAGGATCACTTCAGCCCAGGAGTTTAAGGCTGC...TTTGCATAAAATGCAAATCGGTGCCTGTGCTTGAAGGTTGCTGTAGAGCATCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000367679.7 ENST00000613570.4 |
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| CDS-3UTR CCA 90 bp | ATGGAGATCACAGGCACTGGTCCTGACTTCAGGGGGAATAGGAGTAATTCCTACGTTTGCCTTGGGTTATaGTGGGGTTTTTCTTGTCCT | + |
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Preference number: 4 (lower is better) Translates to: MEITGTGPDFRGNRSNSYVCLGL*WGFSCP Trigger: AGGACAAGAAAAACCCCACCATAACCCAAGGCAAAC...GTAGGAATTACTCCTATTCCCCCTGAAGTCAGGACCAGTGCCTGTGATCTCCAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000367679.7 ENST00000613570.4 |
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| CDS-3UTR CCA 90 bp | ATTTTTACACTGGTGGAAGCTGATGTCAGTAACTTAAAAGGCAAGCAAATACTTGAGGTGGAGCTACGTTaGCCTCGTGACCGGGCCCTG | + |
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Preference number: 4 (lower is better) Translates to: IFTLVEADVSNLKGKQILEVELR*PRDRAL Trigger: CAGGGCCCGGTCACGAGGCCAACGTAGCTCCACCTC...AAGTATTTGCTTGCCTTTTAAGTTACTGACATCAGCTTCCACCAGTGTAAAAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000613570.4 |
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| CDS-3UTR TCA 90 bp | CAGATGCTCTACAGCAACCTTCAAGCACAGGCACCGATTTGCATTTTATGCAAAGTCCAAGTCGGAAGTTaGCTAGAGAGTCACCTGCTT | + |
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Preference number: 4 (lower is better) Translates to: QMLYSNLQAQAPICILCKVQVGS*LESHLL Trigger: AAGCAGGTGACTCTCTAGTCAACTTCCGACTTGGAC...TTTGCATAAAATGCAAATCGGTGCCTGTGCTTGAAGGTTGCTGTAGAGCATCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000613570.4 |
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| CDS-3UTR TCA 90 bp | CAGATGCTCTACAGCAACCTTCAAGCACAGGCACCGATTTGCATTTTATGCAAATCAGTCATGGACTGTTaGAGCACGATTTCCTGGTGC | + |
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Preference number: 4 (lower is better) Translates to: QMLYSNLQAQAPICILCKSVMDC*STISWC Trigger: GCACCAGGAAATCGTGCTTCAACAGTCCATGACTGA...TTTGCATAAAATGCAAATCGGTGCCTGTGCTTGAAGGTTGCTGTAGAGCATCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000613570.4 |
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| CDS-3UTR CCA 90 bp | CAGATGCTCTACAGCAACCTTCAAGCACAGGCACCGATTTGCATTTTATGCAAAGCCAGCCTTCATGCCTaGCTTCAATTGCTTTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: QMLYSNLQAQAPICILCKASLHA*LQLLSL Trigger: CAGAGAAAGCAATTGAAGCCAGGCATGAAGGCTGGC...TTTGCATAAAATGCAAATCGGTGCCTGTGCTTGAAGGTTGCTGTAGAGCATCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000367679.7 ENST00000613570.4 |
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| CDS-3UTR CCA 90 bp | ATGGAGATCACAGGCACTGGTCCTGACTTCAGGGGGAATAGGAGTAATTCCTACTGCCTTGGGTTATGGTaGGGTTTTTCTTGTCCTATA | + |
|
Preference number: 4 (lower is better) Translates to: MEITGTGPDFRGNRSNSYCLGLW*GFSCPI Trigger: TATAGGACAAGAAAAACCCCACCATAACCCAAGGCA...GTAGGAATTACTCCTATTCCCCCTGAAGTCAGGACCAGTGCCTGTGATCTCCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000367679.7 ENST00000613570.4 |
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| CDS-3UTR CCA 90 bp | ATTTTTACACTGGTGGAAGCTGATGTCAGTAACTTAAAAGGCAAGCAAATACTTACAGTTCCGACGTGGTaGCGTCATCACTGGCCGCCG | + |
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Preference number: 4 (lower is better) Translates to: IFTLVEADVSNLKGKQILTVPTW*RHHWPP Trigger: CGGCGGCCAGTGATGACGCCACCACGTCGGAACTGT...AAGTATTTGCTTGCCTTTTAAGTTACTGACATCAGCTTCCACCAGTGTAAAAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000613570.4 |
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| CDS-3UTR CCA 90 bp | TCACAGGCACTGGTCCTGACTTCAGGGGGAATAGGAGTAATTCCTACTAAAAGCGATCGTCAGGCGGCTTaGAATATATCTATATGCCTA | + |
|
Preference number: 4 (lower is better) Translates to: SQALVLTSGGIGVIPTKSDRQAA*NISICL Trigger: TAGGCATATAGATATATTCCAAGCCGCCTGACGATC...GCTTTTAGTAGGAATTACTCCTATTCCCCCTGAAGTCAGGACCAGTGCCTGTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000367679.7 ENST00000613570.4 |
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| CDS-3UTR CCA 90 bp | CAGATGCTCTACAGCAACCTTCAAGCACAGGCACCGATTTGCATTTTATGCAAAAGGGTTTCACCATGTTaGCCAGATGGTCTTGAACTC | + |
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Preference number: 4 (lower is better) Translates to: QMLYSNLQAQAPICILCKRVSPC*PDGLEL Trigger: GAGTTCAAGACCATCTGGCCAACATGGTGAAACCCT...TTTGCATAAAATGCAAATCGGTGCCTGTGCTTGAAGGTTGCTGTAGAGCATCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000367679.7 |
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| CDS-3UTR CCA 90 bp | CAGATGCTCTACAGCAACCTTCAAGCACAGGCACCGATTTGCATTTTATGCAAATGGGGAGGAGCAGCCTaGTTACTTTCAAACGAGAAA | + |
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Preference number: 4 (lower is better) Translates to: QMLYSNLQAQAPICILCKWGGAA*LLSNEK Trigger: TTTCTCGTTTGAAAGTAACCAGGCTGCTCCTCCCCA...TTTGCATAAAATGCAAATCGGTGCCTGTGCTTGAAGGTTGCTGTAGAGCATCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000613570.4 |
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| CDS-3UTR TCA 90 bp | CAGATGCTCTACAGCAACCTTCAAGCACAGGCACCGATTTGCATTTTATGCAAACTAATGGTAGCGGTTTaGTTTTCAGTGAGTTTGGCG | + |
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Preference number: 4 (lower is better) Translates to: QMLYSNLQAQAPICILCKLMVAV*FSVSLA Trigger: CGCCAAACTCACTGAAAATCAAACCGCTACCATTAG...TTTGCATAAAATGCAAATCGGTGCCTGTGCTTGAAGGTTGCTGTAGAGCATCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000613570.4 |
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| CDS-3UTR CCA 90 bp | TGGAGATCACAGGCACTGGTCCTGACTTCAGGGGGAATAGGAGTAATTCCTACTCACGGCAAAACTAACTaGTACCATACAAAGATATGT | + |
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Preference number: 4 (lower is better) Translates to: WRSQALVLTSGGIGVIPTHGKTN*YHTKIC Trigger: ACATATCTTTGTATGGTACCAGTTAGTTTTGCCGTG...AGTAGGAATTACTCCTATTCCCCCTGAAGTCAGGACCAGTGCCTGTGATCTCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000367679.7 ENST00000613570.4 |
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| CDS-3UTR CCA 90 bp | TTAGATCGTCAGGCGGCTTGGAATATATCTATATGCCTATTTTCAGTTATCTTATCCAGCCTTAGTAGCTaGGATTACGGGCGCCAGCCT | + |
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Preference number: 4 (lower is better) Translates to: LDRQAAWNISICLFSVILSSLSS*DYGRQP Trigger: AGGCTGGCGCCCGTAATCCCAGCTACTAAGGCTGGA...TAAGATAACTGAAAATAGGCATATAGATATATTCCAAGCCGCCTGACGATCTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000367679.7 ENST00000613570.4 |
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| CDS-3UTR CCA 90 bp | CAGATGCTCTACAGCAACCTTCAAGCACAGGCACCGATTTGCATTTTATGCAAAGTTTGCCTTGGGTTATaGTGGGGTTTTTCTTGTCCT | + |
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Preference number: 4 (lower is better) Translates to: QMLYSNLQAQAPICILCKVCLGL*WGFSCP Trigger: AGGACAAGAAAAACCCCACCATAACCCAAGGCAAAC...TTTGCATAAAATGCAAATCGGTGCCTGTGCTTGAAGGTTGCTGTAGAGCATCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000367679.7 ENST00000613570.4 |
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| CDS-3UTR CCA 90 bp | TTAGATCGTCAGGCGGCTTGGAATATATCTATATGCCTATTTTCAGTTATCTTAAAAAGGGCCCGCCTATaGCCACAGTTTCAGGCCCTC | + |
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Preference number: 4 (lower is better) Translates to: LDRQAAWNISICLFSVILKRARL*PQFQAL Trigger: GAGGGCCTGAAACTGTGGCCATAGGCGGGCCCTTTT...TAAGATAACTGAAAATAGGCATATAGATATATTCCAAGCCGCCTGACGATCTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000613570.4 |
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| CDS-3UTR TCA 90 bp | CAGATGCTCTACAGCAACCTTCAAGCACAGGCACCGATTTGCATTTTATGCAAATGGATTCGGTATAAGTaGGCCTGTTTACCATCAAAG | + |
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Preference number: 4 (lower is better) Translates to: QMLYSNLQAQAPICILCKWIRYK*ACLPSK Trigger: CTTTGATGGTAAACAGGCTCACTTATACCGAATCCA...TTTGCATAAAATGCAAATCGGTGCCTGTGCTTGAAGGTTGCTGTAGAGCATCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000613570.4 |
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| CDS-3UTR GCA 90 bp | TCACAGGCACTGGTCCTGACTTCAGGGGGAATAGGAGTAATTCCTACTAAAAGCCATATGCATTGTGTCTaGTATTCTGTTCATGTGTCA | + |
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Preference number: 4 (lower is better) Translates to: SQALVLTSGGIGVIPTKSHMHCV*YSVHVS Trigger: TGACACATGAACAGAATAGCAGACACAATGCATATG...GCTTTTAGTAGGAATTACTCCTATTCCCCCTGAAGTCAGGACCAGTGCCTGTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000367679.7 ENST00000613570.4 |
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| CDS-3UTR GCA 90 bp | CAGATGCTCTACAGCAACCTTCAAGCACAGGCACCGATTTGCATTTTATGCAAATGTCAATACATTGTTTaGCTTGGGTTATGGTGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: QMLYSNLQAQAPICILCKCQYIV*LGLWWG Trigger: ACCCCACCATAACCCAAGGCAAACAATGTATTGACA...TTTGCATAAAATGCAAATCGGTGCCTGTGCTTGAAGGTTGCTGTAGAGCATCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000367679.7 ENST00000613570.4 |
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| CDS-3UTR CCA 90 bp | TCACAGGCACTGGTCCTGACTTCAGGGGGAATAGGAGTAATTCCTACTAAAAGCCACGGCAAAACTAACTaGTACCATACAAAGATATGT | + |
|
Preference number: 4 (lower is better) Translates to: SQALVLTSGGIGVIPTKSHGKTN*YHTKIC Trigger: ACATATCTTTGTATGGTACCAGTTAGTTTTGCCGTG...GCTTTTAGTAGGAATTACTCCTATTCCCCCTGAAGTCAGGACCAGTGCCTGTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000367679.7 ENST00000613570.4 |
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| CDS-3UTR CCA 90 bp | CAGATGCTCTACAGCAACCTTCAAGCACAGGCACCGATTTGCATTTTATGCAAAGATCGTCAGGCGGCTTaGAATATATCTATATGCCTA | + |
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Preference number: 4 (lower is better) Translates to: QMLYSNLQAQAPICILCKDRQAA*NISICL Trigger: TAGGCATATAGATATATTCCAAGCCGCCTGACGATC...TTTGCATAAAATGCAAATCGGTGCCTGTGCTTGAAGGTTGCTGTAGAGCATCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000367679.7 ENST00000613570.4 |
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| CDS-3UTR CCA 90 bp | CAGATGCTCTACAGCAACCTTCAAGCACAGGCACCGATTTGCATTTTATGCAAATGCCTTGGGTTATGGTaGGGTTTTTCTTGTCCTATA | + |
|
Preference number: 4 (lower is better) Translates to: QMLYSNLQAQAPICILCKCLGLW*GFSCPI Trigger: TATAGGACAAGAAAAACCCCACCATAACCCAAGGCA...TTTGCATAAAATGCAAATCGGTGCCTGTGCTTGAAGGTTGCTGTAGAGCATCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000367679.7 ENST00000613570.4 |
||
| CDS-3UTR TCA 90 bp | TTAGATCGTCAGGCGGCTTGGAATATATCTATATGCCTATTTTCAGTTATCTTACGGTTTGATTTTCAGTaGGTTTGGCGCGGTGGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: LDRQAAWNISICLFSVILRFDFQ*VWRGGD Trigger: GTCTCCACCGCGCCAAACTCACTGAAAATCAAACCG...TAAGATAACTGAAAATAGGCATATAGATATATTCCAAGCCGCCTGACGATCTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000613570.4 |
||
| CDS-3UTR GCA 90 bp | CAGATGCTCTACAGCAACCTTCAAGCACAGGCACCGATTTGCATTTTATGCAAAGCACAGGCACCGATTTaGATTTTATGCAAAACTTCA | + |
|
Preference number: 4 (lower is better) Translates to: QMLYSNLQAQAPICILCKAQAPI*ILCKTS Trigger: TGAAGTTTTGCATAAAATGCAAATCGGTGCCTGTGC...TTTGCATAAAATGCAAATCGGTGCCTGTGCTTGAAGGTTGCTGTAGAGCATCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000367679.7 ENST00000613570.4 |
||
| CDS-3UTR GCA 90 bp | ATTTTTACACTGGTGGAAGCTGATGTCAGTAACTTAAAAGGCAAGCAAATACTTAGCACGATTTCCTGGTaGTTTCGCCCCTTTCACCGA | + |
|
Preference number: 4 (lower is better) Translates to: IFTLVEADVSNLKGKQILSTISW*FRPFHR Trigger: TCGGTGAAAGGGGCGAAAGCACCAGGAAATCGTGCT...AAGTATTTGCTTGCCTTTTAAGTTACTGACATCAGCTTCCACCAGTGTAAAAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000613570.4 |
||
| CDS-3UTR TCA 90 bp | ATTTTTACACTGGTGGAAGCTGATGTCAGTAACTTAAAAGGCAAGCAAATACTTCTTAAACTCCTGGGCTaGAGTGATCCTCCAGCCTTA | + |
|
Preference number: 4 (lower is better) Translates to: IFTLVEADVSNLKGKQILLKLLG*SDPPAL Trigger: TAAGGCTGGAGGATCACTTCAGCCCAGGAGTTTAAG...AAGTATTTGCTTGCCTTTTAAGTTACTGACATCAGCTTCCACCAGTGTAAAAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000367679.7 ENST00000613570.4 |
||
| CDS-3UTR CCA 90 bp | ATTTTTACACTGGTGGAAGCTGATGTCAGTAACTTAAAAGGCAAGCAAATACTTGCCAGCCTTCATGCCTaGCTTCAATTGCTTTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: IFTLVEADVSNLKGKQILASLHA*LQLLSL Trigger: CAGAGAAAGCAATTGAAGCCAGGCATGAAGGCTGGC...AAGTATTTGCTTGCCTTTTAAGTTACTGACATCAGCTTCCACCAGTGTAAAAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000367679.7 ENST00000613570.4 |
||
| CDS-3UTR CCA 90 bp | TTAGATCGTCAGGCGGCTTGGAATATATCTATATGCCTATTTTCAGTTATCTTAGAAGAAGGCGAAAAATaGGGAGGAGCAGCCTGGTTA | + |
|
Preference number: 4 (lower is better) Translates to: LDRQAAWNISICLFSVILEEGEK*GGAAWL Trigger: TAACCAGGCTGCTCCTCCCCATTTTTCGCCTTCTTC...TAAGATAACTGAAAATAGGCATATAGATATATTCCAAGCCGCCTGACGATCTAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000613570.4 |
||
| CDS-3UTR CCA 90 bp | ATTTTTACACTGGTGGAAGCTGATGTCAGTAACTTAAAAGGCAAGCAAATACTTTCCGTAGTTCTCGCCTaGGTTTGGATTCGGTATAAG | + |
|
Preference number: 4 (lower is better) Translates to: IFTLVEADVSNLKGKQILSVVLA*VWIRYK Trigger: CTTATACCGAATCCAAACCCAGGCGAGAACTACGGA...AAGTATTTGCTTGCCTTTTAAGTTACTGACATCAGCTTCCACCAGTGTAAAAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000613570.4 |
||
| CDS-3UTR GCA 90 bp | ATTTTTACACTGGTGGAAGCTGATGTCAGTAACTTAAAAGGCAAGCAAATACTTTGTCAATACATTGTTTaGCTTGGGTTATGGTGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: IFTLVEADVSNLKGKQILCQYIV*LGLWWG Trigger: ACCCCACCATAACCCAAGGCAAACAATGTATTGACA...AAGTATTTGCTTGCCTTTTAAGTTACTGACATCAGCTTCCACCAGTGTAAAAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000367679.7 ENST00000613570.4 |
||
| CDS-3UTR CCA 90 bp | GATCGTCAGGCGGCTTGGAATATATCTATATGCCTATTTTCAGTTATCTTAGTAGTGCATGGTAATGCATaGCATATACATTGCTTAAGG | + |
|
Preference number: 4 (lower is better) Translates to: DRQAAWNISICLFSVILVVHGNA*HIHCLR Trigger: CCTTAAGCAATGTATATGCCATGCATTACCATGCAC...TACTAAGATAACTGAAAATAGGCATATAGATATATTCCAAGCCGCCTGACGATC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000367679.7 ENST00000613570.4 |
||
| CDS-3UTR GCA 90 bp | ATTTTTACACTGGTGGAAGCTGATGTCAGTAACTTAAAAGGCAAGCAAATACTTGCACAGGCACCGATTTaGATTTTATGCAAAACTTCA | + |
|
Preference number: 4 (lower is better) Translates to: IFTLVEADVSNLKGKQILAQAPI*ILCKTS Trigger: TGAAGTTTTGCATAAAATGCAAATCGGTGCCTGTGC...AAGTATTTGCTTGCCTTTTAAGTTACTGACATCAGCTTCCACCAGTGTAAAAAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENST00000367679.7 ENST00000613570.4 |
||
| CDS-3UTR CCA 90 bp | TTAGATCGTCAGGCGGCTTGGAATATATCTATATGCCTATTTTCAGTTATCTTAGTGCATGGTAATGCATaGCATATACATTGCTTAAGG | + |
|
Preference number: 4 (lower is better) Translates to: LDRQAAWNISICLFSVILVHGNA*HIHCLR Trigger: CCTTAAGCAATGTATATGCCATGCATTACCATGCAC...TAAGATAACTGAAAATAGGCATATAGATATATTCCAAGCCGCCTGACGATCTAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000367679.7 ENST00000613570.4 |
||
| CDS-3UTR CCA 90 bp | ATTTTTACACTGGTGGAAGCTGATGTCAGTAACTTAAAAGGCAAGCAAATACTTCAATTTTTACACTGGTaGAAGCTGATGTCAGTAACT | + |
|
Preference number: 4 (lower is better) Translates to: IFTLVEADVSNLKGKQILQFLHW*KLMSVT Trigger: AGTTACTGACATCAGCTTCCACCAGTGTAAAAATTG...AAGTATTTGCTTGCCTTTTAAGTTACTGACATCAGCTTCCACCAGTGTAAAAAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000367679.7 ENST00000613570.4 |
||
| CDS CCA 90 bp | AGCAAGGGGCGAGTGAGGTGTCCCCCGGGAAGGCGGCGCACTGACTaGCGCGGGACCGGGTGGCCGCAGGGCGGCTCAGCCCACGGAAAC | + |
|
Preference number: 5 (lower is better) Translates to: SKGRVRCPPGRRRTD*RGTGWPQGGSAHGN Trigger: GTTTCCGTGGGCTGAGCCGCCCTGCGGCCACCCGGTCCCGCGCCAGTCAGTGCGCCGCCTTCCCGGGGGACACCTCACTCGCCCCTTGCT 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000405362.1 |
||
| CDS CCA 90 bp | GCACGGATAATCGCCGCACACCCCCGCTCGAGCCCAGCAGGCGAGTaGGGTGCGAGGTCGAGTGGAAGCGCTGGGGAGCCGACGGCGCAG | + |
|
Preference number: 5 (lower is better) Translates to: ARIIAAHPRSSPAGE*GARSSGSAGEPTAQ Trigger: CTGCGCCGTCGGCTCCCCAGCGCTTCCACTCGACCTCGCACCCCACTCGCCTGCTGGGCTCGAGCGGGGGTGTGCGGCGATTATCCGTGC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000405362.1 |
||
| CDS TCA 90 bp | GCGTCATCACTGGCCGCCGTAGGAGGTGGAGCTACGTTGGCCTCGTaGCCGGGCCCTGTAGCGGAAGCCCAGGTCAAGGCCCTAACAAAA | + |
|
Preference number: 5 (lower is better) Translates to: ASSLAAVGGGATLAS*PGPVAEAQVKALTK Trigger: TTTTGTTAGGGCCTTGACCTGGGCTTCCGCTACAGGGCCCGGTCACGAGGCCAACGTAGCTCCACCTCCTACGGCGGCCAGTGATGACGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000613570.4 |
||
| CDS TCA 90 bp | TCAAACCGAGCGCAGACGCCGATCTTCGGAGTCCAAGTCGGAAGTTaGCTAGAGAGTCACCTGCTTTCGTCCGCTCTAGGACACCAGACA | + |
|
Preference number: 5 (lower is better) Translates to: SNRAQTPIFGVQVGS*LESHLLSSALGHQT Trigger: TGTCTGGTGTCCTAGAGCGGACGAAAGCAGGTGACTCTCTAGTCAACTTCCGACTTGGACTCCGAAGATCGGCGTCTGCGCTCGGTTTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000426793.1 |
||
| CDS CCA 90 bp | AAAGGGCCCGCCTATGGCCACAGTTTCAGGCCCTCCTTTCAGTCATaGACTGTTGAAGCACGATTTCCTGGTGCTTTCGCCCCTTTCACC | + |
|
Preference number: 5 (lower is better) Translates to: KGPAYGHSFRPSFQS*TVEARFPGAFAPFT Trigger: GGTGAAAGGGGCGAAAGCACCAGGAAATCGTGCTTCAACAGTCCATGACTGAAAGGAGGGCCTGAAACTGTGGCCATAGGCGGGCCCTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000613570.4 |
||
| CDS TCA 90 bp | CGCCTATGGCCACAGTTTCAGGCCCTCCTTTCAGTCATGGACTGTTaGAGCACGATTTCCTGGTGCTTTCGCCCCTTTCACCGACCATTT | + |
|
Preference number: 5 (lower is better) Translates to: RLWPQFQALLSVMDC*STISWCFRPFHRPF Trigger: AAATGGTCGGTGAAAGGGGCGAAAGCACCAGGAAATCGTGCTTCAACAGTCCATGACTGAAAGGAGGGCCTGAAACTGTGGCCATAGGCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000613570.4 |
||
| CDS TCA 90 bp | AAGAACGGATATGTTAAGCGTGGAGGGCTCCTAATGGTAGCGGTTTaGTTTTCAGTGAGTTTGGCGCGGTGGAGACGTCACCGCGGTCTA | + |
|
Preference number: 5 (lower is better) Translates to: KNGYVKRGGLLMVAV*FSVSLARWRRHRGL Trigger: TAGACCGCGGTGACGTCTCCACCGCGCCAAACTCACTGAAAATCAAACCGCTACCATTAGGAGCCCTCCACGCTTAACATATCCGTTCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000613570.4 |
||
| CDS GCA 90 bp | TTCTGTAGCTTCCAACCGCCCTCTACCAAGAACGACACTCATGTTTaGACCCAGCTTTGCTTGAATGAAGCTTCCTGTCCACTGGCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: FCSFQPPSTKNDTHV*TQLCLNEASCPLAG Trigger: CCCAGCCAGTGGACAGGAAGCTTCATTCAAGCAAAGCTGGGTGCAAACATGAGTGTCGTTCTTGGTAGAGGGCGGTTGGAAGCTACAGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000405362.1 |
||
| CDS CCA 90 bp | TGTGTAAGGTTAGTCTCTCAGCCTCCGCGAGAAGAAGGCGAAAAATaGGGAGGAGCAGCCTGGTTACTTTCAAACGAGAAAGAACGGATA | + |
|
Preference number: 5 (lower is better) Translates to: CVRLVSQPPREEGEK*GGAAWLLSNEKERI Trigger: TATCCGTTCTTTCTCGTTTGAAAGTAACCAGGCTGCTCCTCCCCATTTTTCGCCTTCTTCTCGCGGAGGCTGAGAGACTAACCTTACACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000426793.1 ENST00000461977.1 ENST00000613570.4 |
||
| CDS-3UTR CAA 90 bp | ATGGAGATCACAGGCACTGGTCCTGACTTCAGGGGGAATAGGAGTAATTCCTACCCTAATGGTAGCGGTTaGATTTTCAGTGAGTTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: MEITGTGPDFRGNRSNSYPNGSG*IFSEFG Trigger: GCCAAACTCACTGAAAATCAAACCGCTACCATTAGG...GTAGGAATTACTCCTATTCCCCCTGAAGTCAGGACCAGTGCCTGTGATCTCCAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000613570.4 |
||
| CDS-3UTR CAA 90 bp | TCACAGGCACTGGTCCTGACTTCAGGGGGAATAGGAGTAATTCCTACTAAAAGCTTCAGTCATGGACTGTaGAAGCACGATTTCCTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: SQALVLTSGGIGVIPTKSFSHGL*KHDFLV Trigger: CACCAGGAAATCGTGCTTCAACAGTCCATGACTGAA...GCTTTTAGTAGGAATTACTCCTATTCCCCCTGAAGTCAGGACCAGTGCCTGTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000613570.4 |
||
| CDS-3UTR CAA 90 bp | TGGAGATCACAGGCACTGGTCCTGACTTCAGGGGGAATAGGAGTAATTCCTACTTCTGATCTAACTGTGTaGGCTAATACCTCCAGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: WRSQALVLTSGGIGVIPTSDLTV*ANTSRK Trigger: TTTCCTGGAGGTATTAGCCAACACAGTTAGATCAGA...AGTAGGAATTACTCCTATTCCCCCTGAAGTCAGGACCAGTGCCTGTGATCTCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000367679.7 ENST00000613570.4 |
||
| CDS-3UTR CAA 90 bp | TCACAGGCACTGGTCCTGACTTCAGGGGGAATAGGAGTAATTCCTACTAAAAGCAGATCGTCAGGCGGCTaGGAATATATCTATATGCCT | + |
|
Preference number: 5 (lower is better) Translates to: SQALVLTSGGIGVIPTKSRSSGG*EYIYMP Trigger: AGGCATATAGATATATTCCAAGCCGCCTGACGATCT...GCTTTTAGTAGGAATTACTCCTATTCCCCCTGAAGTCAGGACCAGTGCCTGTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000367679.7 ENST00000613570.4 |
||
| CDS-3UTR CAA 90 bp | ATTTTTACACTGGTGGAAGCTGATGTCAGTAACTTAAAAGGCAAGCAAATACTTAGTGATCCGCCCACCTaGGCCTCCCAAGGTGTTGGG | + |
|
Preference number: 5 (lower is better) Translates to: IFTLVEADVSNLKGKQILSDPPT*ASQGVG Trigger: CCCAACACCTTGGGAGGCCAAGGTGGGCGGATCACT...AAGTATTTGCTTGCCTTTTAAGTTACTGACATCAGCTTCCACCAGTGTAAAAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000367679.7 |
||
| CDS-3UTR CAA 90 bp | CAGATGCTCTACAGCAACCTTCAAGCACAGGCACCGATTTGCATTTTATGCAAAAGTCCAAGTCGGAAGTaGACTAGAGAGTCACCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: QMLYSNLQAQAPICILCKSPSRK*TRESPA Trigger: AGCAGGTGACTCTCTAGTCAACTTCCGACTTGGACT...TTTGCATAAAATGCAAATCGGTGCCTGTGCTTGAAGGTTGCTGTAGAGCATCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000613570.4 |
||
| CDS-3UTR CAA 90 bp | TCACAGGCACTGGTCCTGACTTCAGGGGGAATAGGAGTAATTCCTACTAAAAGCTCTGATCTAACTGTGTaGGCTAATACCTCCAGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: SQALVLTSGGIGVIPTKSSDLTV*ANTSRK Trigger: TTTCCTGGAGGTATTAGCCAACACAGTTAGATCAGA...GCTTTTAGTAGGAATTACTCCTATTCCCCCTGAAGTCAGGACCAGTGCCTGTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000367679.7 ENST00000613570.4 |
||
| CDS TCA 90 bp | AACACAGACTCAAAACTCATTGGGGATGAATTTGTTAGACCACTATaGGGAATAGGTTGCTCGGAGGCAGAACTGGCTATAGGGAAGCAA | + |
|
Preference number: 5 (lower is better) Translates to: NTDSKLIGDEFVRPL*GIGCSEAELAIGKQ Trigger: TTGCTTCCCTATAGCCAGTTCTGCCTCCGAGCAACCTATTCCTCATAGTGGTCTAACAAATTCATCCCCAATGAGTTTTGAGTCTGTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000461977.1 ENST00000483307.1 |
||
| CDS-3UTR CAA 90 bp | CAGATGCTCTACAGCAACCTTCAAGCACAGGCACCGATTTGCATTTTATGCAAATGCATGGCATATACATaGCTTAAGGTGGTAATAAGG | + |
|
Preference number: 5 (lower is better) Translates to: QMLYSNLQAQAPICILCKCMAYT*LKVVIR Trigger: CCTTATTACCACCTTAAGCAATGTATATGCCATGCA...TTTGCATAAAATGCAAATCGGTGCCTGTGCTTGAAGGTTGCTGTAGAGCATCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000367679.7 ENST00000613570.4 |
||
| CDS-3UTR CAA 90 bp | CAGATGCTCTACAGCAACCTTCAAGCACAGGCACCGATTTGCATTTTATGCAAAAATACATTGTTTGCCTaGGGTTATGGTGGGGTTTTT | + |
|
Preference number: 5 (lower is better) Translates to: QMLYSNLQAQAPICILCKNTLFA*GYGGVF Trigger: AAAAACCCCACCATAACCCAAGGCAAACAATGTATT...TTTGCATAAAATGCAAATCGGTGCCTGTGCTTGAAGGTTGCTGTAGAGCATCTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000367679.7 ENST00000613570.4 |
||
| CDS-3UTR CAA 90 bp | ATTTTTACACTGGTGGAAGCTGATGTCAGTAACTTAAAAGGCAAGCAAATACTTCACCAGGCCGCCATGTaGTGTAAGGTTAGTCTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: IFTLVEADVSNLKGKQILHQAAM*CKVSLS Trigger: TGAGAGACTAACCTTACACAACATGGCGGCCTGGTG...AAGTATTTGCTTGCCTTTTAAGTTACTGACATCAGCTTCCACCAGTGTAAAAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000613570.4 |
||
| CDS-3UTR CAA 90 bp | GATCGTCAGGCGGCTTGGAATATATCTATATGCCTATTTTCAGTTATCTTAGTATGCATGGCATATACATaGCTTAAGGTGGTAATAAGG | + |
|
Preference number: 5 (lower is better) Translates to: DRQAAWNISICLFSVILVCMAYT*LKVVIR Trigger: CCTTATTACCACCTTAAGCAATGTATATGCCATGCA...TACTAAGATAACTGAAAATAGGCATATAGATATATTCCAAGCCGCCTGACGATC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000367679.7 ENST00000613570.4 |
||
| CDS-3UTR CAA 90 bp | TTAGATCGTCAGGCGGCTTGGAATATATCTATATGCCTATTTTCAGTTATCTTAAATACATTGTTTGCCTaGGGTTATGGTGGGGTTTTT | + |
|
Preference number: 5 (lower is better) Translates to: LDRQAAWNISICLFSVILNTLFA*GYGGVF Trigger: AAAAACCCCACCATAACCCAAGGCAAACAATGTATT...TAAGATAACTGAAAATAGGCATATAGATATATTCCAAGCCGCCTGACGATCTAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000367679.7 ENST00000613570.4 |
||
| CDS CCA 72 bp | CCGGGAAGGCGGCGCACTGACTGGCGCGGGACCGGGTaGCCGCAGGGCGGCTCAGCCCACGGAAACGGCGGT | + |
|
Preference number: 6 (lower is better) Translates to: PGRRRTDWRGTG*PQGGSAHGNGG Trigger: ACCGCCGTTTCCGTGGGCTGAGCCGCCCTGCGGCCACCCGGTCCCGCGCCAGTCAGTGCGCCGCCTTCCCGG 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000405362.1 |
||
| CDS CCA 72 bp | CGAGTGAGGTGTCCCCCGGGAAGGCGGCGCACTGACTaGCGCGGGACCGGGTGGCCGCAGGGCGGCTCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: RVRCPPGRRRTD*RGTGWPQGGSA Trigger: GGCTGAGCCGCCCTGCGGCCACCCGGTCCCGCGCCAGTCAGTGCGCCGCCTTCCCGGGGGACACCTCACTCG 78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000405362.1 |
||
| CDS CCA 72 bp | ATCGCCGCACACCCCCGCTCGAGCCCAGCAGGCGAGTaGGGTGCGAGGTCGAGTGGAAGCGCTGGGGAGCCG | + |
|
Preference number: 6 (lower is better) Translates to: IAAHPRSSPAGE*GARSSGSAGEP Trigger: CGGCTCCCCAGCGCTTCCACTCGACCTCGCACCCCACTCGCCTGCTGGGCTCGAGCGGGGGTGTGCGGCGAT 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000405362.1 |
||
| CDS GCA 72 bp | AAGGGCCGCTCTCCCAGACCCACTCCCCGCACCGCCTaGACGGATAATCGCCGCACACCCCCGCTCGAGCCC | + |
|
Preference number: 6 (lower is better) Translates to: KGRSPRPTPRTA*TDNRRTPPLEP Trigger: GGGCTCGAGCGGGGGTGTGCGGCGATTATCCGTGCAGGCGGTGCGGGGAGTGGGTCTGGGAGAGCGGCCCTT 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000405362.1 |
||
| CDS TCA 72 bp | CTGGCCGCCGTAGGAGGTGGAGCTACGTTGGCCTCGTaGCCGGGCCCTGTAGCGGAAGCCCAGGTCAAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: LAAVGGGATLAS*PGPVAEAQVKA Trigger: GGCCTTGACCTGGGCTTCCGCTACAGGGCCCGGTCACGAGGCCAACGTAGCTCCACCTCCTACGGCGGCCAG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000613570.4 |
||
| CDS CCA 72 bp | CGACGTGGTGGCGTCATCACTGGCCGCCGTAGGAGGTaGAGCTACGTTGGCCTCGTGACCGGGCCCTGTAGC | + |
|
Preference number: 6 (lower is better) Translates to: RRGGVITGRRRR*SYVGLVTGPCS Trigger: GCTACAGGGCCCGGTCACGAGGCCAACGTAGCTCCACCTCCTACGGCGGCCAGTGATGACGCCACCACGTCG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000613570.4 |
||
| CDS CCA 72 bp | AGCCCAGGTCAAGGCCCTAACAAAAGGGCCCGCCTATaGCCACAGTTTCAGGCCCTCCTTTCAGTCATGGAC | + |
|
Preference number: 6 (lower is better) Translates to: SPGQGPNKRARL*PQFQALLSVMD Trigger: GTCCATGACTGAAAGGAGGGCCTGAAACTGTGGCCATAGGCGGGCCCTTTTGTTAGGGCCTTGACCTGGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000613570.4 |
||
| CDS CAA 90 bp | CTCAAACCGAGCGCAGACGCCGATCTTCGGAGTCCAAGTCGGAAGTaGACTAGAGAGTCACCTGCTTTCGTCCGCTCTAGGACACCAGAC | + |
|
Preference number: 6 (lower is better) Translates to: LKPSADADLRSPSRK*TRESPAFVRSRTPD Trigger: GTCTGGTGTCCTAGAGCGGACGAAAGCAGGTGACTCTCTAGTCAACTTCCGACTTGGACTCCGAAGATCGGCGTCTGCGCTCGGTTTGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000426793.1 |
||
| CDS TCA 72 bp | GCGCAGACGCCGATCTTCGGAGTCCAAGTCGGAAGTTaGCTAGAGAGTCACCTGCTTTCGTCCGCTCTAGGA | + |
|
Preference number: 6 (lower is better) Translates to: AQTPIFGVQVGS*LESHLLSSALG Trigger: TCCTAGAGCGGACGAAAGCAGGTGACTCTCTAGTCAACTTCCGACTTGGACTCCGAAGATCGGCGTCTGCGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000426793.1 |
||
| CDS CAA 72 bp | TCCGCTCTAGGACACCAGACACACCAGGCCGCCATGTaGTGTAAGGTTAGTCTCTCAGCCTCCGCGAGAAGA | + |
|
Preference number: 6 (lower is better) Translates to: SALGHQTHQAAM*CKVSLSASARR Trigger: TCTTCTCGCGGAGGCTGAGAGACTAACCTTACACAACATGGCGGCCTGGTGTGTCTGGTGTCCTAGAGCGGA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000426793.1 ENST00000461977.1 ENST00000613570.4 |
||
| CDS CAA 72 bp | AGCGCAGACGCCGATCTTCGGAGTCCAAGTCGGAAGTaGACTAGAGAGTCACCTGCTTTCGTCCGCTCTAGG | + |
|
Preference number: 6 (lower is better) Translates to: SADADLRSPSRK*TRESPAFVRSR Trigger: CCTAGAGCGGACGAAAGCAGGTGACTCTCTAGTCAACTTCCGACTTGGACTCCGAAGATCGGCGTCTGCGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000426793.1 |
||
| CDS CAA 90 bp | CTGCTTTCGTCCGCTCTAGGACACCAGACACACCAGGCCGCCATGTaGTGTAAGGTTAGTCTCTCAGCCTCCGCGAGAAGAAGGCGAAAA | + |
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Preference number: 6 (lower is better) Translates to: LLSSALGHQTHQAAM*CKVSLSASARRRRK Trigger: TTTTCGCCTTCTTCTCGCGGAGGCTGAGAGACTAACCTTACACAACATGGCGGCCTGGTGTGTCTGGTGTCCTAGAGCGGACGAAAGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000426793.1 ENST00000461977.1 ENST00000613570.4 |
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| CDS CAA 90 bp | CCGCCTATGGCCACAGTTTCAGGCCCTCCTTTCAGTCATGGACTGTaGAAGCACGATTTCCTGGTGCTTTCGCCCCTTTCACCGACCATT | + |
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Preference number: 6 (lower is better) Translates to: PPMATVSGPPFSHGL*KHDFLVLSPLSPTI Trigger: AATGGTCGGTGAAAGGGGCGAAAGCACCAGGAAATCGTGCTTCAACAGTCCATGACTGAAAGGAGGGCCTGAAACTGTGGCCATAGGCGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000613570.4 |
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| CDS CCA 72 bp | GCCTATGGCCACAGTTTCAGGCCCTCCTTTCAGTCATaGACTGTTGAAGCACGATTTCCTGGTGCTTTCGCC | + |
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Preference number: 6 (lower is better) Translates to: AYGHSFRPSFQS*TVEARFPGAFA Trigger: GGCGAAAGCACCAGGAAATCGTGCTTCAACAGTCCATGACTGAAAGGAGGGCCTGAAACTGTGGCCATAGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000613570.4 |
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| CDS TCA 72 bp | CCACAGTTTCAGGCCCTCCTTTCAGTCATGGACTGTTaGAGCACGATTTCCTGGTGCTTTCGCCCCTTTCAC | + |
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Preference number: 6 (lower is better) Translates to: PQFQALLSVMDC*STISWCFRPFH Trigger: GTGAAAGGGGCGAAAGCACCAGGAAATCGTGCTTCAACAGTCCATGACTGAAAGGAGGGCCTGAAACTGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000613570.4 |
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| CDS CAA 72 bp | GCCACAGTTTCAGGCCCTCCTTTCAGTCATGGACTGTaGAAGCACGATTTCCTGGTGCTTTCGCCCCTTTCA | + |
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Preference number: 6 (lower is better) Translates to: ATVSGPPFSHGL*KHDFLVLSPLS Trigger: TGAAAGGGGCGAAAGCACCAGGAAATCGTGCTTCAACAGTCCATGACTGAAAGGAGGGCCTGAAACTGTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000613570.4 |
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| CDS TCA 72 bp | TATGTTAAGCGTGGAGGGCTCCTAATGGTAGCGGTTTaGTTTTCAGTGAGTTTGGCGCGGTGGAGACGTCAC | + |
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Preference number: 6 (lower is better) Translates to: YVKRGGLLMVAV*FSVSLARWRRH Trigger: GTGACGTCTCCACCGCGCCAAACTCACTGAAAATCAAACCGCTACCATTAGGAGCCCTCCACGCTTAACATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000426793.1 ENST00000613570.4 |
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| CDS TCA 72 bp | CTTTCTGTAGCGATCTTCGGAGTCCAAGTCGGAAGTTaGCTAGAGAGTCACCTGCTTTCGTCCGCTCTAGGA | + |
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Preference number: 6 (lower is better) Translates to: LSVAIFGVQVGS*LESHLLSSALG Trigger: TCCTAGAGCGGACGAAAGCAGGTGACTCTCTAGTCAACTTCCGACTTGGACTCCGAAGATCGCTACAGAAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000461977.1 ENST00000613570.4 |
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| CDS CAA 72 bp | TCTTTCTGTAGCGATCTTCGGAGTCCAAGTCGGAAGTaGACTAGAGAGTCACCTGCTTTCGTCCGCTCTAGG | + |
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Preference number: 6 (lower is better) Translates to: SFCSDLRSPSRK*TRESPAFVRSR Trigger: CCTAGAGCGGACGAAAGCAGGTGACTCTCTAGTCAACTTCCGACTTGGACTCCGAAGATCGCTACAGAAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000461977.1 ENST00000613570.4 |
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| CDS GCA 72 bp | TTCCAACCGCCCTCTACCAAGAACGACACTCATGTTTaGACCCAGCTTTGCTTGAATGAAGCTTCCTGTCCA | + |
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Preference number: 6 (lower is better) Translates to: FQPPSTKNDTHV*TQLCLNEASCP Trigger: TGGACAGGAAGCTTCATTCAAGCAAAGCTGGGTGCAAACATGAGTGTCGTTCTTGGTAGAGGGCGGTTGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000405362.1 |
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| CDS CCA 72 bp | TTAGTCTCTCAGCCTCCGCGAGAAGAAGGCGAAAAATaGGGAGGAGCAGCCTGGTTACTTTCAAACGAGAAA | + |
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Preference number: 6 (lower is better) Translates to: LVSQPPREEGEK*GGAAWLLSNEK Trigger: TTTCTCGTTTGAAAGTAACCAGGCTGCTCCTCCCCATTTTTCGCCTTCTTCTCGCGGAGGCTGAGAGACTAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000426793.1 ENST00000461977.1 ENST00000613570.4 |
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| CDS CAA 72 bp | AGCCAACCCTTAACTACAAAGACCTTAAAAAGCAACTaGCTGGACGTGCCCTCTTCAGGTAGTTTGACAGTT | + |
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Preference number: 6 (lower is better) Translates to: SQPLTTKTLKSN*LDVPSSGSLTV Trigger: AACTGTCAAACTACCTGAAGAGGGCACGTCCAGCAAGTTGCTTTTTAAGGTCTTTGTAGTTAAGGGTTGGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000469173.1 |
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| CDS TCA 72 bp | CAACACAATGGTGAATACATCATCTTTCTAGTTCTATaGAAGGTACCCTTACTCCATAGTTCTTGTGGGAAA | + |
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Preference number: 6 (lower is better) Translates to: QHNGEYIIFLVL*KVPLLHSSCGK Trigger: TTTCCCACAAGAACTATGGAGTAAGGGTACCTTTCATAGAACTAGAAAGATGATGTATTCACCATTGTGTTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000469173.1 |
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