RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CACUL1 (Homo sapiens)

Ensembl gene IDs: ENSG00000151893

Ensembl transcript IDs: ENST00000369151.8, ENST00000477583.1, ENST00000481360.1, ENST00000493518.5, ENST00000544392.5

Found 394 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ACCCGACAGCATGGCACGCAGCCAGGGAGTGGTAGCTGCACAGTGTaGGCACTGGAGATGGATGTGCAGTGTGCAGTGTTCACAGCCATG +
Preference number: 1 (lower is better)
Translates to: TRQHGTQPGSGSCTV*ALEMDVQCAVFTAM
Trigger: CATGGCTGTGAACACTGCACACTGCACATCCATCTCCAGTGCTCACACTGTGCAGCTACCACTCCCTGGCTGCGTGCCATGCTGTCGGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369151.8
3UTR CCA 90 bp GCACGCAGCCAGGGAGTGGTAGCTGCACAGTGTGAGCACTGGAGATaGATGTGCAGTGTGCAGTGTTCACAGCCATGGACATCCATTCTT +
Preference number: 1 (lower is better)
Translates to: ARSQGVVAAQCEHWR*MCSVQCSQPWTSIL
Trigger: AAGAATGGATGTCCATGGCTGTGAACACTGCACACTGCACATCCATCTCCAGTGCTCACACTGTGCAGCTACCACTCCCTGGCTGCGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369151.8
3UTR CCA 90 bp CAGTACACATATTCATGCCACTCGGCTCTGAAAAGAGGTTCAAGGTaGGTCAAGGTGGGTCTTGGCCAGTGGAGGAAGGAAGGTGTCCAG +
Preference number: 1 (lower is better)
Translates to: QYTYSCHSALKRGSR*VKVGLGQWRKEGVQ
Trigger: CTGGACACCTTCCTTCCTCCACTGGCCAAGACCCACCTTGACCCACCTTGAACCTCTTTTCAGAGCCGAGTGGCATGAATATGTGTACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369151.8
3UTR GCA 90 bp GCTCCTGAGTGTGTGCAGCCCCCACTGTGCTCTGAATACAGTCTCTaGAGCTCCAGTGTGTCCTCTTTTCAGGAAGGAAAGCATATTCAA +
Preference number: 1 (lower is better)
Translates to: APECVQPPLCSEYSL*SSSVSSFQEGKHIQ
Trigger: TTGAATATGCTTTCCTTCCTGAAAAGAGGACACACTGGAGCTGCAGAGACTGTATTCAGAGCACAGTGGGGGCTGCACACACTCAGGAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369151.8
ENST00000493518.5
3UTR TCA 90 bp ATCAACAGAAGCAGAAACAGTACACATATTCATGCCACTCGGCTCTaGAAAGAGGTTCAAGGTGGGTCAAGGTGGGTCTTGGCCAGTGGA +
Preference number: 1 (lower is better)
Translates to: INRSRNSTHIHATRL*KEVQGGSRWVLASG
Trigger: TCCACTGGCCAAGACCCACCTTGACCCACCTTGAACCTCTTTTCAGAGCCGAGTGGCATGAATATGTGTACTGTTTCTGCTTCTGTTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369151.8
3UTR TCA 90 bp GGTCAGTACAGAATATTGCGAGGTGATGCTCATGCAAACTCTTCCTaGGGAATTTATGTGTGCAAATCTGCAACCCGACAGCATGGCACG +
Preference number: 1 (lower is better)
Translates to: GQYRILRGDAHANSS*GIYVCKSATRQHGT
Trigger: CGTGCCATGCTGTCGGGTTGCAGATTTGCACACATAAATTCCTCAGGAAGAGTTTGCATGAGCATCACCTCGCAATATTCTGTACTGACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369151.8
3UTR GCA 90 bp ACTATGGCTTCTGACATACAAGCACCACTAGGAACAAGACTTCATTaGTTCATCCTTGCTCTGGCTGTGCTAGTGAGTGGCAAAAGCCTC +
Preference number: 1 (lower is better)
Translates to: TMASDIQAPLGTRLH*FILALAVLVSGKSL
Trigger: GAGGCTTTTGCCACTCACTAGCACAGCCAGAGCAAGGATGAAGCAATGAAGTCTTGTTCCTAGTGGTGCTTGTATGTCAGAAGCCATAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369151.8
3UTR CCA 90 bp AGTACTGCCAATACTATAGCAGCTGGTGACAGACATCGTGTTAAGTaGCACAGGGAATGGAAATGCTCTAGGAGAGTTGGTCCCCAACAT +
Preference number: 1 (lower is better)
Translates to: STANTIAAGDRHRVK*HREWKCSRRVGPQH
Trigger: ATGTTGGGGACCAACTCTCCTAGAGCATTTCCATTCCCTGTGCCACTTAACACGATGTCTGTCACCAGCTGCTATAGTATTGGCAGTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369151.8
ENST00000493518.5
3UTR TCA 90 bp ACTCAGAGAACTGGCATGTTTAGAATGGTCCAAACGTTCATATTATaGAGTGCTTCCAAGTCCCCGTTCTCCCCTCTGTTCTCATTCCCC +
Preference number: 1 (lower is better)
Translates to: TQRTGMFRMVQTFIL*SASKSPFSPLFSFP
Trigger: GGGGAATGAGAACAGAGGGGAGAACGGGGACTTGGAAGCACTTCATAATATGAACGTTTGGACCATTCTAAACATGCCAGTTCTCTGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369151.8
3UTR GCA 90 bp GGATGTGCAGTGTGCAGTGTTCACAGCCATGGACATCCATTCTTCTaGAATCTCATCTACCCACAAATTAGCTTTCACTCTAGACCCCAA +
Preference number: 1 (lower is better)
Translates to: GCAVCSVHSHGHPFF*NLIYPQISFHSRPQ
Trigger: TTGGGGTCTAGAGTGAAAGCTAATTTGTGGGTAGATGAGATTGCAGAAGAATGGATGTCCATGGCTGTGAACACTGCACACTGCACATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369151.8
3UTR CCA 90 bp TTCCTTTCTCATATTCTTGTGGCCAGAAACTGGGGTGAACTTCAGTaGGGTAATGAAAGAAACAGGAGAGCCATTTCTCCAGGAACTCCT +
Preference number: 1 (lower is better)
Translates to: FLSHILVARNWGELQ*GNERNRRAISPGTP
Trigger: AGGAGTTCCTGGAGAAATGGCTCTCCTGTTTCTTTCATTACCCCACTGAAGTTCACCCCAGTTTCTGGCCACAAGAATATGAGAAAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369151.8
3UTR TCA 90 bp CACACACACACACTGGGGTGTGCACACTACGGCATTAAAGGCAGGTaGGTGAGTTTAATAGGGTTTTCGGTTTCATTGCTTGTATTCTTA +
Preference number: 1 (lower is better)
Translates to: HTHTLGCAHYGIKGR*VSLIGFSVSLLVFL
Trigger: TAAGAATACAAGCAATGAAACCGAAAACCCTATTAAACTCACTCACCTGCCTTTAATGCCGTAGTGTGCACACCCCAGTGTGTGTGTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369151.8
3UTR GCA 90 bp CCCCTCACAATCCATTCAGAAAGGTCTTGGATATCCTTGGCCCTTTaGTCTTCCATTTATATCGACGAATCAAATTGTCAGGTTCCACAG +
Preference number: 1 (lower is better)
Translates to: PLTIHSERSWISLAL*SSIYIDESNCQVPQ
Trigger: CTGTGGAACCTGACAATTTGATTCGTCGATATAAATGGAAGAGCAAAGGGCCAAGGATATCCAAGACCTTTCTGAATGGATTGTGAGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369151.8
3UTR CCA 90 bp TGGAAAACAACAGGGTTCCTTTCTCATATTCTTGTGGCCAGAAACTaGGGTGAACTTCAGTGGGGTAATGAAAGAAACAGGAGAGCCATT +
Preference number: 1 (lower is better)
Translates to: WKTTGFLSHILVARN*GELQWGNERNRRAI
Trigger: AATGGCTCTCCTGTTTCTTTCATTACCCCACTGAAGTTCACCCCAGTTTCTGGCCACAAGAATATGAGAAAGGAACCCTGTTGTTTTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369151.8
3UTR TCA 90 bp TTCAGGCTGCACATACATACTAGACAGTTGAAGCAAATCAGCCATTaGCTAACCAGACAACCAGCCTGCATGTACGGTTTTGTATCTTCA +
Preference number: 1 (lower is better)
Translates to: FRLHIHTRQLKQISH*LTRQPACMYGFVSS
Trigger: TGAAGATACAAAACCGTACATGCAGGCTGGTTGTCTGGTTAGTCAATGGCTGATTTGCTTCAACTGTCTAGTATGTATGTGCAGCCTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369151.8
3UTR TCA 90 bp GCTAGTATGCGTACAGACCACCACTCGGAAGTTATCCTTTTGTGCTaGAAAACGTTCAAATCCCTTGTTTGGTCAGTACAGAATATTGCG +
Preference number: 1 (lower is better)
Translates to: ASMRTDHHSEVILLC*KTFKSLVWSVQNIA
Trigger: CGCAATATTCTGTACTGACCAAACAAGGGATTTGAACGTTTTTCAGCACAAAAGGATAACTTCCGAGTGGTGGTCTGTACGCATACTAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369151.8
3UTR CCA 90 bp TTCAGGAAGGAAAGCATATTCAATACATTCACTATCTGTACCCCCTaGAACTTGCACATGCTGACGAGCTATTATAAGCCAACTCATCCC +
Preference number: 1 (lower is better)
Translates to: FRKESIFNTFTICTP*NLHMLTSYYKPTHP
Trigger: GGGATGAGTTGGCTTATAATAGCTCGTCAGCATGTGCAAGTTCCAGGGGGTACAGATAGTGAATGTATTGAATATGCTTTCCTTCCTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493518.5
3UTR CCA 90 bp AATCTTGTAGTGCTAGTTCCCCTCACAATCCATTCAGAAAGGTCTTaGATATCCTTGGCCCTTTGCTCTTCCATTTATATCGACGAATCA +
Preference number: 1 (lower is better)
Translates to: NLVVLVPLTIHSERS*ISLALCSSIYIDES
Trigger: TGATTCGTCGATATAAATGGAAGAGCAAAGGGCCAAGGATATCCAAGACCTTTCTGAATGGATTGTGAGGGGAACTAGCACTACAAGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369151.8
3UTR GCA 90 bp GTGCTGAAAAACGTTCAAATCCCTTGTTTGGTCAGTACAGAATATTaGGAGGTGATGCTCATGCAAACTCTTCCTGAGGAATTTATGTGT +
Preference number: 1 (lower is better)
Translates to: VLKNVQIPCLVSTEY*EVMLMQTLPEEFMC
Trigger: ACACATAAATTCCTCAGGAAGAGTTTGCATGAGCATCACCTCGCAATATTCTGTACTGACCAAACAAGGGATTTGAACGTTTTTCAGCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369151.8
3UTR TCA 90 bp AAAACGTTCAAATCCCTTGTTTGGTCAGTACAGAATATTGCGAGGTaGTGCTCATGCAAACTCTTCCTGAGGAATTTATGTGTGCAAATC +
Preference number: 1 (lower is better)
Translates to: KTFKSLVWSVQNIAR*CSCKLFLRNLCVQI
Trigger: GATTTGCACACATAAATTCCTCAGGAAGAGTTTGCATGAGCATCACCTCGCAATATTCTGTACTGACCAAACAAGGGATTTGAACGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369151.8
3UTR GCA 90 bp CCACAAATTAGCTTTCACTCTAGACCCCAAAGGGAGGGTAATTGCTaGAAATTTGTTAAAGGGACAGAAGAAAAAGTAGCTTGTCTACAA +
Preference number: 1 (lower is better)
Translates to: PQISFHSRPQREGNC*KFVKGTEEKVACLQ
Trigger: TTGTAGACAAGCTACTTTTTCTTCTGTCCCTTTAACAAATTTGCAGCAATTACCCTCCCTTTGGGGTCTAGAGTGAAAGCTAATTTGTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369151.8
3UTR GCA 90 bp TACCCACAAATTAGCTTTCACTCTAGACCCCAAAGGGAGGGTAATTaGTGCAAATTTGTTAAAGGGACAGAAGAAAAAGTAGCTTGTCTA +
Preference number: 1 (lower is better)
Translates to: YPQISFHSRPQREGN*CKFVKGTEEKVACL
Trigger: TAGACAAGCTACTTTTTCTTCTGTCCCTTTAACAAATTTGCAGCAATTACCCTCCCTTTGGGGTCTAGAGTGAAAGCTAATTTGTGGGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369151.8
3UTR TCA 90 bp GTTGTCAGCAAGGAAATGGTATCTATGCTTTTAATGTGCATTACCTaGCGACTAATGAGGCTGAACATCTTTTCACATTTATGGGCCATT +
Preference number: 1 (lower is better)
Translates to: VVSKEMVSMLLMCIT*RLMRLNIFSHLWAI
Trigger: AATGGCCCATAAATGTGAAAAGATGTTCAGCCTCATTAGTCGTCAGGTAATGCACATTAAAAGCATAGATACCATTTCCTTGCTGACAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369151.8
3UTR-3UTR CCA 90 bp GGTTCAAGGTGGGTCAAGGTGGGTCTTGGCCAGTGGAGGAAGGAAGGTGTCCAGGCACAGTGTGAGCACTaGAGATGGATGTGCAGTGTG +
Preference number: 2 (lower is better)
Translates to: GSRWVKVGLGQWRKEGVQAQCEH*RWMCSV
Trigger: CACACTGCACATCCATCTCCAGTGCTCACACTGTGC...CTGGACACCTTCCTTCCTCCACTGGCCAAGACCCACCTTGACCCACCTTGAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369151.8
3UTR-3UTR TCA 90 bp GGTTCAAGGTGGGTCAAGGTGGGTCTTGGCCAGTGGAGGAAGGAAGGTGTCCAGAAGCAAATCAGCCATTaGCTAACCAGACAACCAGCC +
Preference number: 2 (lower is better)
Translates to: GSRWVKVGLGQWRKEGVQKQISH*LTRQPA
Trigger: GGCTGGTTGTCTGGTTAGTCAATGGCTGATTTGCTT...CTGGACACCTTCCTTCCTCCACTGGCCAAGACCCACCTTGACCCACCTTGAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369151.8
3UTR-3UTR GCA 90 bp GGTTCAAGGTGGGTCAAGGTGGGTCTTGGCCAGTGGAGGAAGGAAGGTGTCCAGTTACCTTTGCTAGTATaGGTACAGACCACCACTCGG +
Preference number: 2 (lower is better)
Translates to: GSRWVKVGLGQWRKEGVQLPLLV*VQTTTR
Trigger: CCGAGTGGTGGTCTGTACGCATACTAGCAAAGGTAA...CTGGACACCTTCCTTCCTCCACTGGCCAAGACCCACCTTGACCCACCTTGAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369151.8
3UTR-3UTR CCA 90 bp ACAGGGCCACACCTGCCATCTTGGTGGGTGAGTTTAGATACCATACACTTCTCCCCACACCTGCCATCTTaGTGGGTGAGTTTAGATACC +
Preference number: 2 (lower is better)
Translates to: TGPHLPSWWVSLDTIHFSPHLPS*WVSLDT
Trigger: GGTATCTAAACTCACCCACCAAGATGGCAGGTGTGG...GGAGAAGTGTATGGTATCTAAACTCACCCACCAAGATGGCAGGTGTGGCCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369151.8
ENST00000493518.5
3UTR-3UTR CCA 90 bp AAGAACCTGCAGAGCAGACATGCGACAGCATCCCTGGGATGTTTCTTTTCCCCTATGCGACAGCATCCCTaGGATGTTTCTTTTCCCCTC +
Preference number: 2 (lower is better)
Translates to: KNLQSRHATASLGCFFSPMRQHP*DVSFPL
Trigger: GAGGGGAAAAGAAACATCCCAGGGATGCTGTCGCAT...AGGGGAAAAGAAACATCCCAGGGATGCTGTCGCATGTCTGCTCTGCAGGTTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000369151.8
ENST00000493518.5
3UTR-3UTR CCA 90 bp CAACACTCACCCTGCAGGCTAAGTAACTGTGGTAACAGATGTGTGCTCAGTGTGGGCTGTGCTAGTGAGTaGCAAAAGCCTCTTGCTCGT +
Preference number: 2 (lower is better)
Translates to: QHSPCRLSNCGNRCVLSVGCASE*QKPLAR
Trigger: ACGAGCAAGAGGCTTTTGCCACTCACTAGCACAGCC...CACACTGAGCACACATCTGTTACCACAGTTACTTAGCCTGCAGGGTGAGTGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369151.8
3UTR-3UTR TCA 90 bp GAGCAGACATGCGACAGCATCCCTGGGATGTTTCTTTTCCCCTCAAGTTCTCTGATGAATATGCTCTGGTaGACCAGGGGAAAATCCGAC +
Preference number: 2 (lower is better)
Translates to: EQTCDSIPGMFLFPSSSLMNMLW*TRGKSD
Trigger: GTCGGATTTTCCCCTGGTTCACCAGAGCATATTCAT...CAGAGAACTTGAGGGGAAAAGAAACATCCCAGGGATGCTGTCGCATGTCTGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000369151.8
ENST00000493518.5
3UTR-3UTR GCA 90 bp CTGCAGAGCAGACATGCGACAGCATCCCTGGGATGTTTCTTTTCCCCTCAAGTTTCTGAATACAGTCTCTaGAGCTCCAGTGTGTCCTCT +
Preference number: 2 (lower is better)
Translates to: LQSRHATASLGCFFSPQVSEYSL*SSSVSS
Trigger: AGAGGACACACTGGAGCTGCAGAGACTGTATTCAGA...AACTTGAGGGGAAAAGAAACATCCCAGGGATGCTGTCGCATGTCTGCTCTGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369151.8
ENST00000493518.5
3UTR-3UTR TCA 90 bp GGAATTTATGTGTGCAAATCTGCAACCCGACAGCATGGCACGCAGCCAGGGAGTGAAATGGTCACTTTCTaGGATGCTTTTTCCTCACAG +
Preference number: 2 (lower is better)
Translates to: GIYVCKSATRQHGTQPGSEMVTF*DAFSSQ
Trigger: CTGTGAGGAAAAAGCATCTCAGAAAGTGACCATTTC...ACTCCCTGGCTGCGTGCCATGCTGTCGGGTTGCAGATTTGCACACATAAATTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369151.8
3UTR-3UTR TCA 90 bp CTGCAGAGCAGACATGCGACAGCATCCCTGGGATGTTTCTTTTCCCCTCAAGTTTTTGGAGGAAGCTGCTaGTTTTGGCTGTCAGATTTC +
Preference number: 2 (lower is better)
Translates to: LQSRHATASLGCFFSPQVFGGSC*FWLSDF
Trigger: GAAATCTGACAGCCAAAATCAGCAGCTTCCTCCAAA...AACTTGAGGGGAAAAGAAACATCCCAGGGATGCTGTCGCATGTCTGCTCTGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000369151.8
ENST00000493518.5
3UTR-3UTR TCA 90 bp CAACACTCACCCTGCAGGCTAAGTAACTGTGGTAACAGATGTGTGCTCAGTGTGTGTTGTATTAAGAGCTaGCCCATAGCCAGCTGCAGT +
Preference number: 2 (lower is better)
Translates to: QHSPCRLSNCGNRCVLSVCCIKS*PIASCS
Trigger: ACTGCAGCTGGCTATGGGTCAGCTCTTAATACAACA...CACACTGAGCACACATCTGTTACCACAGTTACTTAGCCTGCAGGGTGAGTGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369151.8
3UTR-3UTR TCA 90 bp AAGAACCTGCAGAGCAGACATGCGACAGCATCCCTGGGATGTTTCTTTTCCCCTGGAACTTGCACATGCTaGCGAGCTATTATAAGCCAA +
Preference number: 2 (lower is better)
Translates to: KNLQSRHATASLGCFFSPGTCTC*RAIISQ
Trigger: TTGGCTTATAATAGCTCGTCAGCATGTGCAAGTTCC...AGGGGAAAAGAAACATCCCAGGGATGCTGTCGCATGTCTGCTCTGCAGGTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493518.5
3UTR-3UTR GCA 90 bp GGTGAGTTTAGATACCATACACTTCTCCAGGAGGAGTTTGACAACATGGTCACAGTGCAGCCCCCACTGTaGTCTGAATACAGTCTCTGC +
Preference number: 2 (lower is better)
Translates to: GEFRYHTLLQEEFDNMVTVQPPL*SEYSLC
Trigger: GCAGAGACTGTATTCAGAGCACAGTGGGGGCTGCAC...TGTGACCATGTTGTCAAACTCCTCCTGGAGAAGTGTATGGTATCTAAACTCACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369151.8
ENST00000493518.5
3UTR-3UTR GCA 90 bp GGAATTTATGTGTGCAAATCTGCAACCCGACAGCATGGCACGCAGCCAGGGAGTCCTAAACTAGAGTACTaGCAATACTATAGCAGCTGG +
Preference number: 2 (lower is better)
Translates to: GIYVCKSATRQHGTQPGSPKLEY*QYYSSW
Trigger: CCAGCTGCTATAGTATTGGCAGTACTCTAGTTTAGG...ACTCCCTGGCTGCGTGCCATGCTGTCGGGTTGCAGATTTGCACACATAAATTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369151.8
3UTR-3UTR CCA 90 bp GAGCAGACATGCGACAGCATCCCTGGGATGTTTCTTTTCCCCTCAAGTTCTCTGCACCTGCCATCTTGGTaGGTGAGTTTAGATACCATA +
Preference number: 2 (lower is better)
Translates to: EQTCDSIPGMFLFPSSSLHLPSW*VSLDTI
Trigger: TATGGTATCTAAACTCACCCACCAAGATGGCAGGTG...CAGAGAACTTGAGGGGAAAAGAAACATCCCAGGGATGCTGTCGCATGTCTGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369151.8
ENST00000493518.5
3UTR-3UTR CCA 90 bp AGGAGTTTGACAACATGGTCACACAGTTGCAAAGTGCACAAAGCTCAAGGCACAGCTCTCTTCCGGGACTaGTCACCCCTTGTAAAACCA +
Preference number: 2 (lower is better)
Translates to: RSLTTWSHSCKVHKAQGTALFRD*SPLVKP
Trigger: TGGTTTTACAAGGGGTGACCAGTCCCGGAAGAGAGC...TGTGCCTTGAGCTTTGTGCACTTTGCAACTGTGTGACCATGTTGTCAAACTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493518.5
3UTR CAA 90 bp TGCTTCATCCTTGCTCTGGCTGTGCTAGTGAGTGGCAAAAGCCTCTaGCTCGTGCTTGCCCTCCAAATTTTTCATAAGCATTCCTGTTAC +
Preference number: 2 (lower is better)
Translates to: CFILALAVLVSGKSL*LVLALQIFHKHSCY
Trigger: GTAACAGGAATGCTTATGAAAAATTTGGAGGGCAAGCACGAGCAAGAGGCTTTTGCCACTCACTAGCACAGCCAGAGCAAGGATGAAGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369151.8
3UTR-3UTR TCA 90 bp ACAGGGCCACACCTGCCATCTTGGTGGGTGAGTTTAGATACCATACACTTCTCCAGTAGAAGAAAGTTGTaGACTGATGGGGGAAAGTTC +
Preference number: 2 (lower is better)
Translates to: TGPHLPSWWVSLDTIHFSSRRKL*TDGGKF
Trigger: GAACTTTCCCCCATCAGTTCACAACTTTCTTCTACT...GGAGAAGTGTATGGTATCTAAACTCACCCACCAAGATGGCAGGTGTGGCCCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369151.8
ENST00000493518.5
3UTR-3UTR TCA 90 bp GAGCAGACATGCGACAGCATCCCTGGGATGTTTCTTTTCCCCTCAAGTTCTCTGTCATTTAAAATGAAGTaGTCAGGAACCCCACACCAC +
Preference number: 2 (lower is better)
Translates to: EQTCDSIPGMFLFPSSSLSFKMK*SGTPHH
Trigger: GTGGTGTGGGGTTCCTGATCACTTCATTTTAAATGA...CAGAGAACTTGAGGGGAAAAGAAACATCCCAGGGATGCTGTCGCATGTCTGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000369151.8
ENST00000493518.5
3UTR-3UTR TCA 90 bp CGTGCTAAAGTACCGCCCATCCCTAAACTAGAGTACTGCCAATACTATAGCAGCAGAGTTGGAGCCATCTaGACCCACTACTATTTCAGG +
Preference number: 2 (lower is better)
Translates to: RAKVPPIPKLEYCQYYSSRVGAI*THYYFR
Trigger: CCTGAAATAGTAGTGGGTTCAGATGGCTCCAACTCT...GCTGCTATAGTATTGGCAGTACTCTAGTTTAGGGATGGGCGGTACTTTAGCACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493518.5
3UTR-3UTR GCA 90 bp CGTGCTAAAGTACCGCCCATCCCTAAACTAGAGTACTGCCAATACTATAGCAGCTCTGAATACAGTCTCTaGAGCTCCAGTGTGTCCTCT +
Preference number: 2 (lower is better)
Translates to: RAKVPPIPKLEYCQYYSSSEYSL*SSSVSS
Trigger: AGAGGACACACTGGAGCTGCAGAGACTGTATTCAGA...GCTGCTATAGTATTGGCAGTACTCTAGTTTAGGGATGGGCGGTACTTTAGCACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369151.8
ENST00000493518.5
3UTR-3UTR GCA 90 bp ACAGGGCCACACCTGCCATCTTGGTGGGTGAGTTTAGATACCATACACTTCTCCCCTAAACTAGAGTACTaGCAATACTATAGCAGCTGG +
Preference number: 2 (lower is better)
Translates to: TGPHLPSWWVSLDTIHFSPKLEY*QYYSSW
Trigger: CCAGCTGCTATAGTATTGGCAGTACTCTAGTTTAGG...GGAGAAGTGTATGGTATCTAAACTCACCCACCAAGATGGCAGGTGTGGCCCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369151.8
ENST00000493518.5
3UTR-3UTR GCA 90 bp GAGCAGACATGCGACAGCATCCCTGGGATGTTTCTTTTCCCCTCAAGTTCTCTGCTTAATAACTGTATCTaGTTCCTAGAGCATCGCAGG +
Preference number: 2 (lower is better)
Translates to: EQTCDSIPGMFLFPSSSLLNNCI*FLEHRR
Trigger: CCTGCGATGCTCTAGGAAGCAGATACAGTTATTAAG...CAGAGAACTTGAGGGGAAAAGAAACATCCCAGGGATGCTGTCGCATGTCTGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369151.8
ENST00000493518.5
3UTR-3UTR GCA 90 bp CAACACTCACCCTGCAGGCTAAGTAACTGTGGTAACAGATGTGTGCTCAGTGTGAAAGCCTCTTGCTCGTaGTTGCCCTCCAAATTTTTC +
Preference number: 2 (lower is better)
Translates to: QHSPCRLSNCGNRCVLSVKASCS*LPSKFF
Trigger: GAAAAATTTGGAGGGCAAGCACGAGCAAGAGGCTTT...CACACTGAGCACACATCTGTTACCACAGTTACTTAGCCTGCAGGGTGAGTGTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369151.8
3UTR CAA 90 bp TCTTGGTGGGTGAGTTTAGATACCATACACTTCTCCAGGAGGAGTTaGACAACATGGTCACACAGTTGCAAAGTGCACAAAGCTCAAGGC +
Preference number: 2 (lower is better)
Translates to: SWWVSLDTIHFSRRS*TTWSHSCKVHKAQG
Trigger: GCCTTGAGCTTTGTGCACTTTGCAACTGTGTGACCATGTTGTCAAACTCCTCCTGGAGAAGTGTATGGTATCTAAACTCACCCACCAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369151.8
ENST00000493518.5
3UTR-3UTR TCA 90 bp CGTGCTAAAGTACCGCCCATCCCTAAACTAGAGTACTGCCAATACTATAGCAGCTTTGGAGGAAGCTGCTaGTTTTGGCTGTCAGATTTC +
Preference number: 2 (lower is better)
Translates to: RAKVPPIPKLEYCQYYSSFGGSC*FWLSDF
Trigger: GAAATCTGACAGCCAAAATCAGCAGCTTCCTCCAAA...GCTGCTATAGTATTGGCAGTACTCTAGTTTAGGGATGGGCGGTACTTTAGCACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369151.8
ENST00000493518.5
3UTR-3UTR GCA 90 bp GGTGAGTTTAGATACCATACACTTCTCCAGGAGGAGTTTGACAACATGGTCACACACAGGGAATGGAAATaGTCTAGGAGAGTTGGTCCC +
Preference number: 2 (lower is better)
Translates to: GEFRYHTLLQEEFDNMVTHREWK*SRRVGP
Trigger: GGGACCAACTCTCCTAGAGCATTTCCATTCCCTGTG...TGTGACCATGTTGTCAAACTCCTCCTGGAGAAGTGTATGGTATCTAAACTCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369151.8
ENST00000493518.5
3UTR-3UTR GCA 90 bp GGAATTTATGTGTGCAAATCTGCAACCCGACAGCATGGCACGCAGCCAGGGAGTATAATGCACAATGCATaGATCTGGGTTTGTGTTTCT +
Preference number: 2 (lower is better)
Translates to: GIYVCKSATRQHGTQPGSIMHNA*IWVCVS
Trigger: AGAAACACAAACCCAGATGCATGCATTGTGCATTAT...ACTCCCTGGCTGCGTGCCATGCTGTCGGGTTGCAGATTTGCACACATAAATTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369151.8
3UTR-3UTR CCA 90 bp GAGCAGACATGCGACAGCATCCCTGGGATGTTTCTTTTCCCCTCAAGTTCTCTGAAGGACTTCAATTATTaGGTGACTTACTTGCTCCCA +
Preference number: 2 (lower is better)
Translates to: EQTCDSIPGMFLFPSSSLKDFNY*VTYLLP
Trigger: TGGGAGCAAGTAAGTCACCCAATAATTGAAGTCCTT...CAGAGAACTTGAGGGGAAAAGAAACATCCCAGGGATGCTGTCGCATGTCTGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369151.8
ENST00000493518.5
3UTR-3UTR TCA 90 bp CGTGCTAAAGTACCGCCCATCCCTAAACTAGAGTACTGCCAATACTATAGCAGCTCATTTAAAATGAAGTaGTCAGGAACCCCACACCAC +
Preference number: 2 (lower is better)
Translates to: RAKVPPIPKLEYCQYYSSSFKMK*SGTPHH
Trigger: GTGGTGTGGGGTTCCTGATCACTTCATTTTAAATGA...GCTGCTATAGTATTGGCAGTACTCTAGTTTAGGGATGGGCGGTACTTTAGCACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369151.8
ENST00000493518.5
3UTR-3UTR CCA 90 bp GGAATTTATGTGTGCAAATCTGCAACCCGACAGCATGGCACGCAGCCAGGGAGTAAAAATAAACTGAATTaGCAGAGGCAGCTGTATGAA +
Preference number: 2 (lower is better)
Translates to: GIYVCKSATRQHGTQPGSKNKLN*QRQLYE
Trigger: TTCATACAGCTGCCTCTGCCAATTCAGTTTATTTTT...ACTCCCTGGCTGCGTGCCATGCTGTCGGGTTGCAGATTTGCACACATAAATTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369151.8
3UTR CAA 90 bp TACCATACACTTCTCCAGGAGGAGTTTGACAACATGGTCACACAGTaGCAAAGTGCACAAAGCTCAAGGCACAGAGTAGAAGAAAGTTGT +
Preference number: 2 (lower is better)
Translates to: YHTLLQEEFDNMVTQ*QSAQSSRHRVEESC
Trigger: ACAACTTTCTTCTACTCTGTGCCTTGAGCTTTGTGCACTTTGCAACTGTGTGACCATGTTGTCAAACTCCTCCTGGAGAAGTGTATGGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369151.8
ENST00000493518.5
3UTR-3UTR TCA 90 bp CTCTCAATAATACTAAGGGAAGCTTCCGTGCTAAAGTACCGCCCATCCCTAAACAAGAAAGTTGTGAACTaGTGGGGGAAAGTTCTAGCA +
Preference number: 2 (lower is better)
Translates to: LSIILREASVLKYRPSLNKKVVN*WGKVLA
Trigger: TGCTAGAACTTTCCCCCATCAGTTCACAACTTTCTT...GTTTAGGGATGGGCGGTACTTTAGCACGGAAGCTTCCCTTAGTATTATTGAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369151.8
ENST00000493518.5
3UTR-3UTR TCA 90 bp CATACACTTCTCCAGGAGGAGTTTGACAACATGGTCACACAGTTGCAAAGTGCAAGTAGAAGAAAGTTGTaGACTGATGGGGGAAAGTTC +
Preference number: 2 (lower is better)
Translates to: HTLLQEEFDNMVTQLQSASRRKL*TDGGKF
Trigger: GAACTTTCCCCCATCAGTTCACAACTTTCTTCTACT...TGCACTTTGCAACTGTGTGACCATGTTGTCAAACTCCTCCTGGAGAAGTGTATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369151.8
ENST00000493518.5
3UTR-3UTR TCA 90 bp CAACACTCACCCTGCAGGCTAAGTAACTGTGGTAACAGATGTGTGCTCAGTGTGGTTATCCTTTTGTGCTaGAAAACGTTCAAATCCCTT +
Preference number: 2 (lower is better)
Translates to: QHSPCRLSNCGNRCVLSVVILLC*KTFKSL
Trigger: AAGGGATTTGAACGTTTTTCAGCACAAAAGGATAAC...CACACTGAGCACACATCTGTTACCACAGTTACTTAGCCTGCAGGGTGAGTGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369151.8
3UTR-3UTR GCA 90 bp AGTCTGATGTTGCCTAGTAGAGAAGCCTATGCTCAATTAAGATTCAAGCAAAATGTGCAGCCCCCACTGTaGTCTGAATACAGTCTCTGC +
Preference number: 2 (lower is better)
Translates to: SLMLPSREAYAQLRFKQNVQPPL*SEYSLC
Trigger: GCAGAGACTGTATTCAGAGCACAGTGGGGGCTGCAC...ATTTTGCTTGAATCTTAATTGAGCATAGGCTTCTCTACTAGGCAACATCAGACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369151.8
ENST00000493518.5
3UTR-3UTR GCA 90 bp GCACAAAGCTCAAGGCACAGAGTAGAAGAAAGTTGTGAACTGATGGGGGAAAGTACATGGTCACACAGTTaGAAAGTGCACAAAGCTCAA +
Preference number: 2 (lower is better)
Translates to: AQSSRHRVEESCELMGESTWSHS*KVHKAQ
Trigger: TTGAGCTTTGTGCACTTTGCAACTGTGTGACCATGT...ACTTTCCCCCATCAGTTCACAACTTTCTTCTACTCTGTGCCTTGAGCTTTGTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369151.8
ENST00000493518.5
3UTR-3UTR GCA 90 bp CAACACTCACCCTGCAGGCTAAGTAACTGTGGTAACAGATGTGTGCTCAGTGTGCAGCTGCAGTCACTGTaGAAAAATTTAGAGAAACTA +
Preference number: 2 (lower is better)
Translates to: QHSPCRLSNCGNRCVLSVQLQSL*KNLEKL
Trigger: TAGTTTCTCTAAATTTTTGCACAGTGACTGCAGCTG...CACACTGAGCACACATCTGTTACCACAGTTACTTAGCCTGCAGGGTGAGTGTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369151.8
3UTR-3UTR CCA 90 bp GGTGAGTTTAGATACCATACACTTCTCCAGGAGGAGTTTGACAACATGGTCACACACCTGCCATCTTGGTaGGTGAGTTTAGATACCATA +
Preference number: 2 (lower is better)
Translates to: GEFRYHTLLQEEFDNMVTHLPSW*VSLDTI
Trigger: TATGGTATCTAAACTCACCCACCAAGATGGCAGGTG...TGTGACCATGTTGTCAAACTCCTCCTGGAGAAGTGTATGGTATCTAAACTCACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369151.8
ENST00000493518.5
3UTR-3UTR CCA 90 bp ACTGCCATCTGTTTAACAAAACGCACTCTTCTAAGAGAATACCCAGTCTTAGTGATGCGACAGCATCCCTaGGATGTTTCTTTTCCCCTC +
Preference number: 2 (lower is better)
Translates to: TAICLTKRTLLREYPVLVMRQHP*DVSFPL
Trigger: GAGGGGAAAAGAAACATCCCAGGGATGCTGTCGCAT...CACTAAGACTGGGTATTCTCTTAGAAGAGTGCGTTTTGTTAAACAGATGGCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369151.8
3UTR CAA 90 bp TCCCCTCACAATCCATTCAGAAAGGTCTTGGATATCCTTGGCCCTTaGCTCTTCCATTTATATCGACGAATCAAATTGTCAGGTTCCACA +
Preference number: 2 (lower is better)
Translates to: SPHNPFRKVLDILGP*LFHLYRRIKLSGST
Trigger: TGTGGAACCTGACAATTTGATTCGTCGATATAAATGGAAGAGCAAAGGGCCAAGGATATCCAAGACCTTTCTGAATGGATTGTGAGGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369151.8
3UTR CAA 90 bp GAATCTTGTAGTGCTAGTTCCCCTCACAATCCATTCAGAAAGGTCTaGGATATCCTTGGCCCTTTGCTCTTCCATTTATATCGACGAATC +
Preference number: 2 (lower is better)
Translates to: ESCSASSPHNPFRKV*DILGPLLFHLYRRI
Trigger: GATTCGTCGATATAAATGGAAGAGCAAAGGGCCAAGGATATCCAAGACCTTTCTGAATGGATTGTGAGGGGAACTAGCACTACAAGATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369151.8
3UTR-3UTR TCA 90 bp AGGAGTTTGACAACATGGTCACACAGTTGCAAAGTGCACAAAGCTCAAGGCACAAGAGATCCTGACATGTaGAACCAATACACCAAAATG +
Preference number: 2 (lower is better)
Translates to: RSLTTWSHSCKVHKAQGTRDPDM*NQYTKM
Trigger: CATTTTGGTGTATTGGTTTCACATGTCAGGATCTCT...TGTGCCTTGAGCTTTGTGCACTTTGCAACTGTGTGACCATGTTGTCAAACTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369151.8
ENST00000493518.5
3UTR-3UTR CCA 90 bp GGTGAGTTTAGATACCATACACTTCTCCAGGAGGAGTTTGACAACATGGTCACAAGGAGTTTGACAACATaGTCACACAGTTGCAAAGTG +
Preference number: 2 (lower is better)
Translates to: GEFRYHTLLQEEFDNMVTRSLTT*SHSCKV
Trigger: CACTTTGCAACTGTGTGACCATGTTGTCAAACTCCT...TGTGACCATGTTGTCAAACTCCTCCTGGAGAAGTGTATGGTATCTAAACTCACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369151.8
ENST00000493518.5
3UTR-3UTR CCA 90 bp AATCAAGGACTTCAATTATTGGGTGACTTACTTGCTCCCAATATCCCACTTCTAACTATCTGTACCCCCTaGAACTTGCACATGCTGACG +
Preference number: 2 (lower is better)
Translates to: NQGLQLLGDLLAPNIPLLTICTP*NLHMLT
Trigger: CGTCAGCATGTGCAAGTTCCAGGGGGTACAGATAGT...TAGAAGTGGGATATTGGGAGCAAGTAAGTCACCCAATAATTGAAGTCCTTGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493518.5
3UTR CAA 90 bp CTCGGAAGTTATCCTTTTGTGCTGAAAAACGTTCAAATCCCTTGTTaGGTCAGTACAGAATATTGCGAGGTGATGCTCATGCAAACTCTT +
Preference number: 2 (lower is better)
Translates to: LGSYPFVLKNVQIPC*VSTEYCEVMLMQTL
Trigger: AAGAGTTTGCATGAGCATCACCTCGCAATATTCTGTACTGACCAAACAAGGGATTTGAACGTTTTTCAGCACAAAAGGATAACTTCCGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369151.8
3UTR-3UTR GCA 90 bp AGTCTGATGTTGCCTAGTAGAGAAGCCTATGCTCAATTAAGATTCAAGCAAAATGCCTTAGGACAGCAGTaGTACTTCTTCCCTATCACA +
Preference number: 2 (lower is better)
Translates to: SLMLPSREAYAQLRFKQNALGQQ*YFFPIT
Trigger: TGTGATAGGGAAGAAGTAGCACTGCTGTCCTAAGGC...ATTTTGCTTGAATCTTAATTGAGCATAGGCTTCTCTACTAGGCAACATCAGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369151.8
ENST00000493518.5
3UTR CAA 90 bp CCGGGACTGGTCACCCCTTGTAAAACCATTCTGTATAAGTTCTCTTaGAAATTTCTGATCTTGAGCAGCATATTCAGAAAGTTCAGATTC +
Preference number: 2 (lower is better)
Translates to: PGLVTPCKTILYKFS*KFLILSSIFRKFRF
Trigger: GAATCTGAACTTTCTGAATATGCTGCTCAAGATCAGAAATTTCAAAGAGAACTTATACAGAATGGTTTTACAAGGGGTGACCAGTCCCGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493518.5
3UTR-3UTR CCA 90 bp TCCTTGATACTAGAATGTTACCAGTGTAGCAACTTAAACTGTCCAGGTCATAGTAGGAGTTTGACAACATaGTCACACAGTTGCAAAGTG +
Preference number: 2 (lower is better)
Translates to: SLILECYQCSNLNCPGHSRSLTT*SHSCKV
Trigger: CACTTTGCAACTGTGTGACCATGTTGTCAAACTCCT...ACTATGACCTGGACAGTTTAAGTTGCTACACTGGTAACATTCTAGTATCAAGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369151.8
3UTR-3UTR GCA 90 bp AGTCTGATGTTGCCTAGTAGAGAAGCCTATGCTCAATTAAGATTCAAGCAAAATCTTAATAACTGTATCTaGTTCCTAGAGCATCGCAGG +
Preference number: 2 (lower is better)
Translates to: SLMLPSREAYAQLRFKQNLNNCI*FLEHRR
Trigger: CCTGCGATGCTCTAGGAAGCAGATACAGTTATTAAG...ATTTTGCTTGAATCTTAATTGAGCATAGGCTTCTCTACTAGGCAACATCAGACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369151.8
ENST00000493518.5
3UTR-3UTR CCA 90 bp AATCAAGGACTTCAATTATTGGGTGACTTACTTGCTCCCAATATCCCACTTCTAAAGGACTTCAATTATTaGGTGACTTACTTGCTCCCA +
Preference number: 2 (lower is better)
Translates to: NQGLQLLGDLLAPNIPLLKDFNY*VTYLLP
Trigger: TGGGAGCAAGTAAGTCACCCAATAATTGAAGTCCTT...TAGAAGTGGGATATTGGGAGCAAGTAAGTCACCCAATAATTGAAGTCCTTGATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369151.8
ENST00000493518.5
3UTR-3UTR CCA 90 bp ACTGCCATCTGTTTAACAAAACGCACTCTTCTAAGAGAATACCCAGTCTTAGTGGTATCTTCAATGATTTaGGCCTTTAGTGATGTGGTA +
Preference number: 2 (lower is better)
Translates to: TAICLTKRTLLREYPVLVVSSMI*AFSDVV
Trigger: TACCACATCACTAAAGGCCCAAATCATTGAAGATAC...CACTAAGACTGGGTATTCTCTTAGAAGAGTGCGTTTTGTTAAACAGATGGCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369151.8
3UTR-3UTR TCA 90 bp AGTCTGATGTTGCCTAGTAGAGAAGCCTATGCTCAATTAAGATTCAAGCAAAATTCCCCAACATTAATATaGATATGCTCTGGTGAACCA +
Preference number: 2 (lower is better)
Translates to: SLMLPSREAYAQLRFKQNSPTLI*ICSGEP
Trigger: TGGTTCACCAGAGCATATTCATATTAATGTTGGGGA...ATTTTGCTTGAATCTTAATTGAGCATAGGCTTCTCTACTAGGCAACATCAGACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369151.8
ENST00000493518.5
3UTR CAA 90 bp TTTCCCCTCAAGTTCTCTGAAGAGGTAAATACTATTAGTCTGATGTaGCCTAGTAGAGAAGCCTATGCTCAATTAAGATTCAAGCAAAAT +
Preference number: 2 (lower is better)
Translates to: FPLKFSEEVNTISLM*PSREAYAQLRFKQN
Trigger: ATTTTGCTTGAATCTTAATTGAGCATAGGCTTCTCTACTAGGCAACATCAGACTAATAGTATTTACCTCTTCAGAGAACTTGAGGGGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369151.8
ENST00000493518.5
3UTR-3UTR TCA 90 bp CCAGTATGTAATTGGGGTAGAAAAACCATATACTGTACTGGCAAGAATACAAAATCCCCAACATTAATATaGATATGCTCTGGTGAACCA +
Preference number: 2 (lower is better)
Translates to: PVCNWGRKTIYCTGKNTKSPTLI*ICSGEP
Trigger: TGGTTCACCAGAGCATATTCATATTAATGTTGGGGA...TTTTGTATTCTTGCCAGTACAGTATATGGTTTTTCTACCCCAATTACATACTGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000369151.8
3UTR TCA 72 bp CATGGCACGCAGCCAGGGAGTGGTAGCTGCACAGTGTaGGCACTGGAGATGGATGTGCAGTGTGCAGTGTTC +
Preference number: 3 (lower is better)
Translates to: HGTQPGSGSCTV*ALEMDVQCAVF
Trigger: GAACACTGCACACTGCACATCCATCTCCAGTGCTCACACTGTGCAGCTACCACTCCCTGGCTGCGTGCCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369151.8
3UTR-3UTR CAA 90 bp CCTGCAGAGCAGACATGCGACAGCATCCCTGGGATGTTTCTTTTCCCCTCAAGTGCCACACCTGCCATCTaGGTGGGTGAGTTTAGATAC +
Preference number: 3 (lower is better)
Translates to: PAEQTCDSIPGMFLFPSSATPAI*VGEFRY
Trigger: GTATCTAAACTCACCCACCAAGATGGCAGGTGTGGC...ACTTGAGGGGAAAAGAAACATCCCAGGGATGCTGTCGCATGTCTGCTCTGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369151.8
ENST00000493518.5
3UTR GCA 72 bp TGTGTGCAGCCCCCACTGTGCTCTGAATACAGTCTCTaGAGCTCCAGTGTGTCCTCTTTTCAGGAAGGAAAG +
Preference number: 3 (lower is better)
Translates to: CVQPPLCSEYSL*SSSVSSFQEGK
Trigger: CTTTCCTTCCTGAAAAGAGGACACACTGGAGCTGCAGAGACTGTATTCAGAGCACAGTGGGGGCTGCACACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369151.8
ENST00000493518.5
3UTR CCA 72 bp TATTCATGCCACTCGGCTCTGAAAAGAGGTTCAAGGTaGGTCAAGGTGGGTCTTGGCCAGTGGAGGAAGGAA +
Preference number: 3 (lower is better)
Translates to: YSCHSALKRGSR*VKVGLGQWRKE
Trigger: TTCCTTCCTCCACTGGCCAAGACCCACCTTGACCCACCTTGAACCTCTTTTCAGAGCCGAGTGGCATGAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369151.8
3UTR-3UTR CAA 90 bp CTGCAGAGCAGACATGCGACAGCATCCCTGGGATGTTTCTTTTCCCCTCAAGTTTGTACCCCCTGGAACTaGCACATGCTGACGAGCTAT +
Preference number: 3 (lower is better)
Translates to: LQSRHATASLGCFFSPQVCTPWN*HMLTSY
Trigger: ATAGCTCGTCAGCATGTGCAAGTTCCAGGGGGTACA...AACTTGAGGGGAAAAGAAACATCCCAGGGATGCTGTCGCATGTCTGCTCTGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000493518.5
3UTR-3UTR CAA 90 bp CTGCAGAGCAGACATGCGACAGCATCCCTGGGATGTTTCTTTTCCCCTCAAGTTTTCTCCAGGAGGAGTTaGACAACATGGTCACACAGT +
Preference number: 3 (lower is better)
Translates to: LQSRHATASLGCFFSPQVFSRRS*TTWSHS
Trigger: ACTGTGTGACCATGTTGTCAAACTCCTCCTGGAGAA...AACTTGAGGGGAAAAGAAACATCCCAGGGATGCTGTCGCATGTCTGCTCTGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369151.8
ENST00000493518.5
3UTR-3UTR CAA 90 bp CCTGCAGAGCAGACATGCGACAGCATCCCTGGGATGTTTCTTTTCCCCTCAAGTAATGCTCTAGGAGAGTaGGTCCCCAACATTAATATG +
Preference number: 3 (lower is better)
Translates to: PAEQTCDSIPGMFLFPSSNALGE*VPNINM
Trigger: CATATTAATGTTGGGGACCAACTCTCCTAGAGCATT...ACTTGAGGGGAAAAGAAACATCCCAGGGATGCTGTCGCATGTCTGCTCTGCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369151.8
ENST00000493518.5
3UTR-3UTR CAA 90 bp AAGAACCTGCAGAGCAGACATGCGACAGCATCCCTGGGATGTTTCTTTTCCCCTTATTGGGTGACTTACTaGCTCCCAATATCCCACTTC +
Preference number: 3 (lower is better)
Translates to: KNLQSRHATASLGCFFSPYWVTY*LPISHF
Trigger: GAAGTGGGATATTGGGAGCAAGTAAGTCACCCAATA...AGGGGAAAAGAAACATCCCAGGGATGCTGTCGCATGTCTGCTCTGCAGGTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369151.8
ENST00000493518.5
3UTR TCA 72 bp AGCAGAAACAGTACACATATTCATGCCACTCGGCTCTaGAAAGAGGTTCAAGGTGGGTCAAGGTGGGTCTTG +
Preference number: 3 (lower is better)
Translates to: SRNSTHIHATRL*KEVQGGSRWVL
Trigger: CAAGACCCACCTTGACCCACCTTGAACCTCTTTTCAGAGCCGAGTGGCATGAATATGTGTACTGTTTCTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369151.8
3UTR GCA 72 bp AGCACCACTAGGAACAAGACTTCATTGCTTCATCCTTaGTCTGGCTGTGCTAGTGAGTGGCAAAAGCCTCTT +
Preference number: 3 (lower is better)
Translates to: STTRNKTSLLHP*SGCASEWQKPL
Trigger: AAGAGGCTTTTGCCACTCACTAGCACAGCCAGAGCAAGGATGAAGCAATGAAGTCTTGTTCCTAGTGGTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369151.8
3UTR GCA 72 bp TCTGACATACAAGCACCACTAGGAACAAGACTTCATTaGTTCATCCTTGCTCTGGCTGTGCTAGTGAGTGGC +
Preference number: 3 (lower is better)
Translates to: SDIQAPLGTRLH*FILALAVLVSG
Trigger: GCCACTCACTAGCACAGCCAGAGCAAGGATGAAGCAATGAAGTCTTGTTCCTAGTGGTGCTTGTATGTCAGA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369151.8
3UTR GCA 72 bp AGCACTGGTTGCAGAAGTCAAGATCAACACTCACCCTaGAGGCTAAGTAACTGTGGTAACAGATGTGTGCTC +
Preference number: 3 (lower is better)
Translates to: STGCRSQDQHSP*RLSNCGNRCVL
Trigger: GAGCACACATCTGTTACCACAGTTACTTAGCCTGCAGGGTGAGTGTTGATCTTGACTTCTGCAACCAGTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369151.8
3UTR CCA 72 bp TGGAGATGGATGTGCAGTGTGCAGTGTTCACAGCCATaGACATCCATTCTTCTGCAATCTCATCTACCCACA +
Preference number: 3 (lower is better)
Translates to: WRWMCSVQCSQP*TSILLQSHLPT
Trigger: TGTGGGTAGATGAGATTGCAGAAGAATGGATGTCCATGGCTGTGAACACTGCACACTGCACATCCATCTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369151.8
3UTR-3UTR CAA 90 bp CAACACTCACCCTGCAGGCTAAGTAACTGTGGTAACAGATGTGTGCTCAGTGTGAGATCACCATTACCTTaGCTAGTATGCGTACAGACC +
Preference number: 3 (lower is better)
Translates to: QHSPCRLSNCGNRCVLSVRSPLP*LVCVQT
Trigger: GGTCTGTACGCATACTAGCAAAGGTAATGGTGATCT...CACACTGAGCACACATCTGTTACCACAGTTACTTAGCCTGCAGGGTGAGTGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369151.8
3UTR-3UTR CAA 90 bp AGGAGTTTGACAACATGGTCACACAGTTGCAAAGTGCACAAAGCTCAAGGCACATTCTCCAGGAGGAGTTaGACAACATGGTCACACAGT +
Preference number: 3 (lower is better)
Translates to: RSLTTWSHSCKVHKAQGTFSRRS*TTWSHS
Trigger: ACTGTGTGACCATGTTGTCAAACTCCTCCTGGAGAA...TGTGCCTTGAGCTTTGTGCACTTTGCAACTGTGTGACCATGTTGTCAAACTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369151.8
ENST00000493518.5
3UTR TCA 72 bp AGGTACCCATGCTGGCTCTATTCTGACTTCACTCAATaGTTTCTGAGATGCATCCATGTTGAAGCCCGCAGT +
Preference number: 3 (lower is better)
Translates to: RYPCWLYSDFTQ*FLRCIHVEARS
Trigger: ACTGCGGGCTTCAACATGGATGCATCTCAGAAATCATTGAGTGAAGTCAGAATAGAGCCAGCATGGGTACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369151.8
3UTR CCA 72 bp GATACCATACACTTCTCCAGGAGGAGTTTGACAACATaGTCACACAGTTGCAAAGTGCACAAAGCTCAAGGC +
Preference number: 3 (lower is better)
Translates to: DTIHFSRRSLTT*SHSCKVHKAQG
Trigger: GCCTTGAGCTTTGTGCACTTTGCAACTGTGTGACCATGTTGTCAAACTCCTCCTGGAGAAGTGTATGGTATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369151.8
ENST00000493518.5
3UTR-3UTR CAA 90 bp AGGAGTTTGACAACATGGTCACACAGTTGCAAAGTGCACAAAGCTCAAGGCACAAACATGGTCACACAGTaGCAAAGTGCACAAAGCTCA +
Preference number: 3 (lower is better)
Translates to: RSLTTWSHSCKVHKAQGTNMVTQ*QSAQSS
Trigger: TGAGCTTTGTGCACTTTGCAACTGTGTGACCATGTT...TGTGCCTTGAGCTTTGTGCACTTTGCAACTGTGTGACCATGTTGTCAAACTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369151.8
ENST00000493518.5
3UTR-3UTR CAA 90 bp GCACAAAGCTCAAGGCACAGAGTAGAAGAAAGTTGTGAACTGATGGGGGAAAGTAACATGGTCACACAGTaGCAAAGTGCACAAAGCTCA +
Preference number: 3 (lower is better)
Translates to: AQSSRHRVEESCELMGESNMVTQ*QSAQSS
Trigger: TGAGCTTTGTGCACTTTGCAACTGTGTGACCATGTT...ACTTTCCCCCATCAGTTCACAACTTTCTTCTACTCTGTGCCTTGAGCTTTGTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369151.8
ENST00000493518.5
3UTR TCA 72 bp ACTGGCATGTTTAGAATGGTCCAAACGTTCATATTATaGAGTGCTTCCAAGTCCCCGTTCTCCCCTCTGTTC +
Preference number: 3 (lower is better)
Translates to: TGMFRMVQTFIL*SASKSPFSPLF
Trigger: GAACAGAGGGGAGAACGGGGACTTGGAAGCACTTCATAATATGAACGTTTGGACCATTCTAAACATGCCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369151.8
3UTR GCA 72 bp CTTTGCCACAGCTGGAAGGGAGCCTTAGGACAGCAGTaGTACTTCTTCCCTATCACACTCAAATATAATGTT +
Preference number: 3 (lower is better)
Translates to: LCHSWKGALGQQ*YFFPITLKYNV
Trigger: AACATTATATTTGAGTGTGATAGGGAAGAAGTAGCACTGCTGTCCTAAGGCTCCCTTCCAGCTGTGGCAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369151.8
ENST00000493518.5
3UTR CCA 72 bp AATACTATAGCAGCTGGTGACAGACATCGTGTTAAGTaGCACAGGGAATGGAAATGCTCTAGGAGAGTTGGT +
Preference number: 3 (lower is better)
Translates to: NTIAAGDRHRVK*HREWKCSRRVG
Trigger: ACCAACTCTCCTAGAGCATTTCCATTCCCTGTGCCACTTAACACGATGTCTGTCACCAGCTGCTATAGTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369151.8
ENST00000493518.5
3UTR CCA 72 bp CATATTCTTGTGGCCAGAAACTGGGGTGAACTTCAGTaGGGTAATGAAAGAAACAGGAGAGCCATTTCTCCA +
Preference number: 3 (lower is better)
Translates to: HILVARNWGELQ*GNERNRRAISP
Trigger: TGGAGAAATGGCTCTCCTGTTTCTTTCATTACCCCACTGAAGTTCACCCCAGTTTCTGGCCACAAGAATATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369151.8
3UTR-3UTR CAA 90 bp CTCTCAATAATACTAAGGGAAGCTTCCGTGCTAAAGTACCGCCCATCCCTAAACAATGCTCTAGGAGAGTaGGTCCCCAACATTAATATG +
Preference number: 3 (lower is better)
Translates to: LSIILREASVLKYRPSLNNALGE*VPNINM
Trigger: CATATTAATGTTGGGGACCAACTCTCCTAGAGCATT...GTTTAGGGATGGGCGGTACTTTAGCACGGAAGCTTCCCTTAGTATTATTGAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369151.8
ENST00000493518.5
3UTR TCA 72 bp AGAATATTGCGAGGTGATGCTCATGCAAACTCTTCCTaGGGAATTTATGTGTGCAAATCTGCAACCCGACAG +
Preference number: 3 (lower is better)
Translates to: RILRGDAHANSS*GIYVCKSATRQ
Trigger: CTGTCGGGTTGCAGATTTGCACACATAAATTCCTCAGGAAGAGTTTGCATGAGCATCACCTCGCAATATTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369151.8
3UTR TCA 72 bp CGTACAGACCACCACTCGGAAGTTATCCTTTTGTGCTaGAAAACGTTCAAATCCCTTGTTTGGTCAGTACAG +
Preference number: 3 (lower is better)
Translates to: RTDHHSEVILLC*KTFKSLVWSVQ
Trigger: CTGTACTGACCAAACAAGGGATTTGAACGTTTTTCAGCACAAAAGGATAACTTCCGAGTGGTGGTCTGTACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369151.8
3UTR GCA 72 bp GTGTGCAGTGTTCACAGCCATGGACATCCATTCTTCTaGAATCTCATCTACCCACAAATTAGCTTTCACTCT +
Preference number: 3 (lower is better)
Translates to: VCSVHSHGHPFF*NLIYPQISFHS
Trigger: AGAGTGAAAGCTAATTTGTGGGTAGATGAGATTGCAGAAGAATGGATGTCCATGGCTGTGAACACTGCACAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369151.8
3UTR CCA 72 bp GTGCTAGTTCCCCTCACAATCCATTCAGAAAGGTCTTaGATATCCTTGGCCCTTTGCTCTTCCATTTATATC +
Preference number: 3 (lower is better)
Translates to: VLVPLTIHSERS*ISLALCSSIYI
Trigger: GATATAAATGGAAGAGCAAAGGGCCAAGGATATCCAAGACCTTTCTGAATGGATTGTGAGGGGAACTAGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369151.8
3UTR TCA 72 bp AGTGACTTCCAGTCAAGGTTTTGTTGTATTAAGAGCTaGCCCATAGCCAGCTGCAGTCACTGTGCAAAAATT +
Preference number: 3 (lower is better)
Translates to: SDFQSRFCCIKS*PIASCSHCAKI
Trigger: AATTTTTGCACAGTGACTGCAGCTGGCTATGGGTCAGCTCTTAATACAACAAAACCTTGACTGGAAGTCACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369151.8
3UTR TCA 72 bp CACATACATACTAGACAGTTGAAGCAAATCAGCCATTaGCTAACCAGACAACCAGCCTGCATGTACGGTTTT +
Preference number: 3 (lower is better)
Translates to: HIHTRQLKQISH*LTRQPACMYGF
Trigger: AAAACCGTACATGCAGGCTGGTTGTCTGGTTAGTCAATGGCTGATTTGCTTCAACTGTCTAGTATGTATGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369151.8
3UTR-3UTR CAA 90 bp CTCTCAATAATACTAAGGGAAGCTTCCGTGCTAAAGTACCGCCCATCCCTAAACCACACCACTGTGTATTaGGACTTAATAACTGTATCT +
Preference number: 3 (lower is better)
Translates to: LSIILREASVLKYRPSLNHTTVY*DLITVS
Trigger: AGATACAGTTATTAAGTCCAAATACACAGTGGTGTG...GTTTAGGGATGGGCGGTACTTTAGCACGGAAGCTTCCCTTAGTATTATTGAGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369151.8
ENST00000493518.5
3UTR-3UTR CAA 90 bp TCCTTGATACTAGAATGTTACCAGTGTAGCAACTTAAACTGTCCAGGTCATAGTAACAGAAATATAGCTTaGCCACAGCTGGAAGGGAGC +
Preference number: 3 (lower is better)
Translates to: SLILECYQCSNLNCPGHSNRNIA*PQLEGS
Trigger: GCTCCCTTCCAGCTGTGGCAAAGCTATATTTCTGTT...ACTATGACCTGGACAGTTTAAGTTGCTACACTGGTAACATTCTAGTATCAAGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369151.8
3UTR TCA 72 bp TTCATCGATGCAATCCAGGATGCTCACAGAGTGAATTaGGTCCAATTAAAGTCCACAAAATCCACGAACTCT +
Preference number: 3 (lower is better)
Translates to: FIDAIQDAHRVN*VQLKSTKSTNS
Trigger: AGAGTTCGTGGATTTTGTGGACTTTAATTGGACTCAATTCACTCTGTGAGCATCCTGGATTGCATCGATGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369151.8
3UTR CCA 72 bp GAAAGCATATTCAATACATTCACTATCTGTACCCCCTaGAACTTGCACATGCTGACGAGCTATTATAAGCCA +
Preference number: 3 (lower is better)
Translates to: ESIFNTFTICTP*NLHMLTSYYKP
Trigger: TGGCTTATAATAGCTCGTCAGCATGTGCAAGTTCCAGGGGGTACAGATAGTGAATGTATTGAATATGCTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493518.5
3UTR TCA 72 bp AAATCCCTTGTTTGGTCAGTACAGAATATTGCGAGGTaGTGCTCATGCAAACTCTTCCTGAGGAATTTATGT +
Preference number: 3 (lower is better)
Translates to: KSLVWSVQNIAR*CSCKLFLRNLC
Trigger: ACATAAATTCCTCAGGAAGAGTTTGCATGAGCATCACCTCGCAATATTCTGTACTGACCAAACAAGGGATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369151.8
3UTR GCA 72 bp ATCCATTCAGAAAGGTCTTGGATATCCTTGGCCCTTTaGTCTTCCATTTATATCGACGAATCAAATTGTCAG +
Preference number: 3 (lower is better)
Translates to: IHSERSWISLAL*SSIYIDESNCQ
Trigger: CTGACAATTTGATTCGTCGATATAAATGGAAGAGCAAAGGGCCAAGGATATCCAAGACCTTTCTGAATGGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369151.8
3UTR GCA 72 bp GGGTCCGTCTCTCCTGAGTTGTTTTCATTGCTGATTTaGATTCAGGTGCTCTTTAGCAGTTATATTATGAAT +
Preference number: 3 (lower is better)
Translates to: GSVSPELFSLLI*IQVLFSSYIMN
Trigger: ATTCATAATATAACTGCTAAAGAGCACCTGAATGCAAATCAGCAATGAAAACAACTCAGGAGAGACGGACCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369151.8
3UTR-3UTR CAA 90 bp AATCAAGGACTTCAATTATTGGGTGACTTACTTGCTCCCAATATCCCACTTCTAACTATTAGTCTGATGTaGCCTAGTAGAGAAGCCTAT +
Preference number: 3 (lower is better)
Translates to: NQGLQLLGDLLAPNIPLLTISLM*PSREAY
Trigger: ATAGGCTTCTCTACTAGGCAACATCAGACTAATAGT...TAGAAGTGGGATATTGGGAGCAAGTAAGTCACCCAATAATTGAAGTCCTTGATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369151.8
ENST00000493518.5
3UTR TCA 72 bp TTTAGAGTGAAAGTATATGCCCTAATACAGAAGGAGTaGTTCAGAACCCACCAAAAGATCAAGAGCCAAAGT +
Preference number: 3 (lower is better)
Translates to: FRVKVYALIQKE*FRTHQKIKSQS
Trigger: ACTTTGGCTCTTGATCTTTTGGTGGGTTCTGAATCACTCCTTCTGTATTAGGGCATATACTTTCACTCTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369151.8
3UTR GCA 72 bp ATTAGCTTTCACTCTAGACCCCAAAGGGAGGGTAATTaGTGCAAATTTGTTAAAGGGACAGAAGAAAAAGTA +
Preference number: 3 (lower is better)
Translates to: ISFHSRPQREGN*CKFVKGTEEKV
Trigger: TACTTTTTCTTCTGTCCCTTTAACAAATTTGCAGCAATTACCCTCCCTTTGGGGTCTAGAGTGAAAGCTAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369151.8
3UTR CCA 72 bp GCCTTTAGTGATGTGGTACAAAACCCAGTATGTAATTaGGGTAGAAAAACCATATACTGTACTGGCAAGAAT +
Preference number: 3 (lower is better)
Translates to: AFSDVVQNPVCN*GRKTIYCTGKN
Trigger: ATTCTTGCCAGTACAGTATATGGTTTTTCTACCCCAATTACATACTGGGTTTTGTACCACATCACTAAAGGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369151.8
3UTR-3UTR CAA 90 bp AATCAAGGACTTCAATTATTGGGTGACTTACTTGCTCCCAATATCCCACTTCTACACACCACTGTGTATTaGGACTTAATAACTGTATCT +
Preference number: 3 (lower is better)
Translates to: NQGLQLLGDLLAPNIPLLHTTVY*DLITVS
Trigger: AGATACAGTTATTAAGTCCAAATACACAGTGGTGTG...TAGAAGTGGGATATTGGGAGCAAGTAAGTCACCCAATAATTGAAGTCCTTGATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369151.8
ENST00000493518.5
3UTR GCA 72 bp CTCTCAGATTGTTATTTTCAGACTTCTCATAATTTCTaGCAAGTTGTCAGCAAGGAAATGGTATCTATGCTT +
Preference number: 3 (lower is better)
Translates to: LSDCYFQTSHNF*QVVSKEMVSML
Trigger: AAGCATAGATACCATTTCCTTGCTGACAACTTGGCAGAAATTATGAGAAGTCTGAAAATAACAATCTGAGAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369151.8
3UTR TCA 72 bp AAGGAAATGGTATCTATGCTTTTAATGTGCATTACCTaGCGACTAATGAGGCTGAACATCTTTTCACATTTA +
Preference number: 3 (lower is better)
Translates to: KEMVSMLLMCIT*RLMRLNIFSHL
Trigger: TAAATGTGAAAAGATGTTCAGCCTCATTAGTCGTCAGGTAATGCACATTAAAAGCATAGATACCATTTCCTT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369151.8
CDS-3UTR GCA 90 bp GGTTCAAGGTGGGTCAAGGTGGGTCTTGGCCAGTGGAGGAAGGAAGGTGTCCAGGGAGGTGGCAGGGGCTaGCGGAAGCCGTCCACCGCA +
Preference number: 4 (lower is better)
Translates to: GSRWVKVGLGQWRKEGVQGGGRG*RKPSTA
Trigger: TGCGGTGGACGGCTTCCGGCAGCCCCTGCCACCTCC...CTGGACACCTTCCTTCCTCCACTGGCCAAGACCCACCTTGACCCACCTTGAACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369151.8
CDS-3UTR GCA 90 bp GGAATTTATGTGTGCAAATCTGCAACCCGACAGCATGGCACGCAGCCAGGGAGTCGGAGAGGGCTGCGGTaGGCAGGGTCTCTCGCTCTC +
Preference number: 4 (lower is better)
Translates to: GIYVCKSATRQHGTQPGSRRGLR*AGSLAL
Trigger: GAGAGCGAGAGACCCTGCGCACCGCAGCCCTCTCCG...ACTCCCTGGCTGCGTGCCATGCTGTCGGGTTGCAGATTTGCACACATAAATTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369151.8
CDS-3UTR GCA 90 bp GAGCAGACATGCGACAGCATCCCTGGGATGTTTCTTTTCCCCTCAAGTTCTCTGGGAGGTGGCAGGGGCTaGCGGAAGCCGTCCACCGCA +
Preference number: 4 (lower is better)
Translates to: EQTCDSIPGMFLFPSSSLGGGRG*RKPSTA
Trigger: TGCGGTGGACGGCTTCCGGCAGCCCCTGCCACCTCC...CAGAGAACTTGAGGGGAAAAGAAACATCCCAGGGATGCTGTCGCATGTCTGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369151.8
ENST00000493518.5
CDS-3UTR CCA 90 bp CCTGCAGAGCAGACATGCGACAGCATCCCTGGGATGTTTCTTTTCCCCTCAAGTATTAGCCTCCGGCGGTaGCTGCGGCCCCATCGGGAG +
Preference number: 4 (lower is better)
Translates to: PAEQTCDSIPGMFLFPSSISLRR*LRPHRE
Trigger: CTCCCGATGGGGCCGCAGCCACCGCCGGAGGCTAAT...ACTTGAGGGGAAAAGAAACATCCCAGGGATGCTGTCGCATGTCTGCTCTGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369151.8
ENST00000493518.5
CDS-3UTR GCA 90 bp AAGAACCTGCAGAGCAGACATGCGACAGCATCCCTGGGATGTTTCTTTTCCCCTCGGAGAGGGCTGCGGTaGGCAGGGTCTCTCGCTCTC +
Preference number: 4 (lower is better)
Translates to: KNLQSRHATASLGCFFSPRRGLR*AGSLAL
Trigger: GAGAGCGAGAGACCCTGCGCACCGCAGCCCTCTCCG...AGGGGAAAAGAAACATCCCAGGGATGCTGTCGCATGTCTGCTCTGCAGGTTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369151.8
ENST00000493518.5
CDS-3UTR GCA 90 bp CTGCAGAGCAGACATGCGACAGCATCCCTGGGATGTTTCTTTTCCCCTCAAGTTTGCTTTCCTCCATCCTaGTGGCCCCCGGCACCCGCC +
Preference number: 4 (lower is better)
Translates to: LQSRHATASLGCFFSPQVCFPPS*WPPAPA
Trigger: GGCGGGTGCCGGGGGCCAGCAGGATGGAGGAAAGCA...AACTTGAGGGGAAAAGAAACATCCCAGGGATGCTGTCGCATGTCTGCTCTGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369151.8
ENST00000493518.5
CDS-3UTR GCA 90 bp ACAGGGCCACACCTGCCATCTTGGTGGGTGAGTTTAGATACCATACACTTCTCCTGCTTTCCTCCATCCTaGTGGCCCCCGGCACCCGCC +
Preference number: 4 (lower is better)
Translates to: TGPHLPSWWVSLDTIHFSCFPPS*WPPAPA
Trigger: GGCGGGTGCCGGGGGCCAGCAGGATGGAGGAAAGCA...GGAGAAGTGTATGGTATCTAAACTCACCCACCAAGATGGCAGGTGTGGCCCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369151.8
ENST00000493518.5
CDS-3UTR CCA 90 bp ATGCTGACGAGCTATTATAAGCCAACTCATCCCCAGCTCTCTTCCGGGACTGGTCGTGGTGCGAGGGACTaGCCGCGAGAAAGCGGAGCC +
Preference number: 4 (lower is better)
Translates to: MLTSYYKPTHPQLSSGTGRGARD*PRESGA
Trigger: GGCTCCGCTTTCTCGCGGCCAGTCCCTCGCACCACG...ACCAGTCCCGGAAGAGAGCTGGGGATGAGTTGGCTTATAATAGCTCGTCAGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493518.5
CDS-3UTR CCA 90 bp AGGAGTTTGACAACATGGTCACACAGTTGCAAAGTGCACAAAGCTCAAGGCACACGCCGGCGGCAGGAATaGGCGCAGCGGAGAGGGCTG +
Preference number: 4 (lower is better)
Translates to: RSLTTWSHSCKVHKAQGTRRRQE*AQRRGL
Trigger: CAGCCCTCTCCGCTGCGCCCATTCCTGCCGCCGGCG...TGTGCCTTGAGCTTTGTGCACTTTGCAACTGTGTGACCATGTTGTCAAACTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369151.8
ENST00000493518.5
CDS-3UTR CCA 90 bp GGTTCAAGGTGGGTCAAGGTGGGTCTTGGCCAGTGGAGGAAGGAAGGTGTCCAGCACACACACACACACTaGGGTGTGCACACTACGGCA +
Preference number: 4 (lower is better)
Translates to: GSRWVKVGLGQWRKEGVQHTHTH*GVHTTA
Trigger: TGCCGTAGTGTGCACACCCCAGTGTGTGTGTGTGTG...CTGGACACCTTCCTTCCTCCACTGGCCAAGACCCACCTTGACCCACCTTGAACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369151.8
CDS-3UTR GCA 90 bp CATACACTTCTCCAGGAGGAGTTTGACAACATGGTCACACAGTTGCAAAGTGCACGCAGCGGAGAGGGCTaGGGTGCGCAGGGTCTCTCG +
Preference number: 4 (lower is better)
Translates to: HTLLQEEFDNMVTQLQSARSGEG*GAQGLS
Trigger: CGAGAGACCCTGCGCACCGCAGCCCTCTCCGCTGCG...TGCACTTTGCAACTGTGTGACCATGTTGTCAAACTCCTCCTGGAGAAGTGTATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369151.8
ENST00000493518.5
CDS-3UTR GCA 90 bp CGTGCTAAAGTACCGCCCATCCCTAAACTAGAGTACTGCCAATACTATAGCAGCCGCCTCACAGGCACCTaGCGCCTGTCTCAACCCCGG +
Preference number: 4 (lower is better)
Translates to: RAKVPPIPKLEYCQYYSSRLTGT*RLSQPR
Trigger: CCGGGGTTGAGACAGGCGGCAGGTGCCTGTGAGGCG...GCTGCTATAGTATTGGCAGTACTCTAGTTTAGGGATGGGCGGTACTTTAGCACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369151.8
ENST00000493518.5
CDS-3UTR CCA 90 bp AGGAGTTTGACAACATGGTCACACAGTTGCAAAGTGCACAAAGCTCAAGGCACATTTCCTCCATCCTGCTaGCCCCCGGCACCCGCCCGC +
Preference number: 4 (lower is better)
Translates to: RSLTTWSHSCKVHKAQGTFPPSC*PPAPAR
Trigger: GCGGGCGGGTGCCGGGGGCCAGCAGGATGGAGGAAA...TGTGCCTTGAGCTTTGTGCACTTTGCAACTGTGTGACCATGTTGTCAAACTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369151.8
ENST00000493518.5
CDS-3UTR CCA 90 bp GGTTCAAGGTGGGTCAAGGTGGGTCTTGGCCAGTGGAGGAAGGAAGGTGTCCAGCATCTGAACCCACTCTaGTCTGAGGGTATACAGGCC +
Preference number: 4 (lower is better)
Translates to: GSRWVKVGLGQWRKEGVQHLNPL*SEGIQA
Trigger: GGCCTGTATACCCTCAGACCAGAGTGGGTTCAGATG...CTGGACACCTTCCTTCCTCCACTGGCCAAGACCCACCTTGACCCACCTTGAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369151.8
CDS-3UTR CCA 90 bp GGTTCAAGGTGGGTCAAGGTGGGTCTTGGCCAGTGGAGGAAGGAAGGTGTCCAGGCTCTCTTCCGGGACTaGTCACCCCTTGTAAAACCA +
Preference number: 4 (lower is better)
Translates to: GSRWVKVGLGQWRKEGVQALFRD*SPLVKP
Trigger: TGGTTTTACAAGGGGTGACCAGTCCCGGAAGAGAGC...CTGGACACCTTCCTTCCTCCACTGGCCAAGACCCACCTTGACCCACCTTGAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369151.8
CDS-3UTR CCA 90 bp GGTTCAAGGTGGGTCAAGGTGGGTCTTGGCCAGTGGAGGAAGGAAGGTGTCCAGGAAACCTCTGCCTCCTaGGTTCAGGCGATTTTCCTG +
Preference number: 4 (lower is better)
Translates to: GSRWVKVGLGQWRKEGVQETSAS*VQAIFL
Trigger: CAGGAAAATCGCCTGAACCCAGGAGGCAGAGGTTTC...CTGGACACCTTCCTTCCTCCACTGGCCAAGACCCACCTTGACCCACCTTGAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369151.8
CDS-3UTR CCA 90 bp CGTGCTAAAGTACCGCCCATCCCTAAACTAGAGTACTGCCAATACTATAGCAGCTCGCCCCGCCTCGGCTaGCAGGGAGCTAACAGGGGA +
Preference number: 4 (lower is better)
Translates to: RAKVPPIPKLEYCQYYSSSPRLG*QGANRG
Trigger: TCCCCTGTTAGCTCCCTGCCAGCCGAGGCGGGGCGA...GCTGCTATAGTATTGGCAGTACTCTAGTTTAGGGATGGGCGGTACTTTAGCACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493518.5
CDS-3UTR GCA 90 bp CTCTCAATAATACTAAGGGAAGCTTCCGTGCTAAAGTACCGCCCATCCCTAAACCGCCTCACAGGCACCTaGCGCCTGTCTCAACCCCGG +
Preference number: 4 (lower is better)
Translates to: LSIILREASVLKYRPSLNRLTGT*RLSQPR
Trigger: CCGGGGTTGAGACAGGCGGCAGGTGCCTGTGAGGCG...GTTTAGGGATGGGCGGTACTTTAGCACGGAAGCTTCCCTTAGTATTATTGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369151.8
ENST00000493518.5
CDS-3UTR GCA 90 bp ACAGGGCCACACCTGCCATCTTGGTGGGTGAGTTTAGATACCATACACTTCTCCTCATCGCCTCGTAGCTaGCCCCCTCCTCCTCTTCCA +
Preference number: 4 (lower is better)
Translates to: TGPHLPSWWVSLDTIHFSSSPRS*PPPPLP
Trigger: TGGAAGAGGAGGAGGGGGGCAGCTACGAGGCGATGA...GGAGAAGTGTATGGTATCTAAACTCACCCACCAAGATGGCAGGTGTGGCCCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369151.8
ENST00000493518.5
CDS-3UTR GCA 90 bp GGTTCAAGGTGGGTCAAGGTGGGTCTTGGCCAGTGGAGGAAGGAAGGTGTCCAGGATGGATGTGCAGTGTaGAGTGTTCACAGCCATGGA +
Preference number: 4 (lower is better)
Translates to: GSRWVKVGLGQWRKEGVQDGCAV*SVHSHG
Trigger: TCCATGGCTGTGAACACTGCACACTGCACATCCATC...CTGGACACCTTCCTTCCTCCACTGGCCAAGACCCACCTTGACCCACCTTGAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369151.8
CDS-3UTR GCA 90 bp GCACAAAGCTCAAGGCACAGAGTAGAAGAAAGTTGTGAACTGATGGGGGAAAGTCAGGAGGGCACGTGGTaGGAGGGACTGGCCGCGAGA +
Preference number: 4 (lower is better)
Translates to: AQSSRHRVEESCELMGESQEGTW*EGLAAR
Trigger: TCTCGCGGCCAGTCCCTCGCACCACGTGCCCTCCTG...ACTTTCCCCCATCAGTTCACAACTTTCTTCTACTCTGTGCCTTGAGCTTTGTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493518.5
CDS-3UTR CCA 90 bp ACAAACCAAGTAAGAAGTCCAACATCCTCTTCCATGAACAGCTTTGTGACAGAGCGCCGGCGGCAGGAATaGGCGCAGCGGAGAGGGCTG +
Preference number: 4 (lower is better)
Translates to: TNQVRSPTSSSMNSFVTERRRQE*AQRRGL
Trigger: CAGCCCTCTCCGCTGCGCCCATTCCTGCCGCCGGCG...CTCTGTCACAAAGCTGTTCATGGAAGAGGATGTTGGACTTCTTACTTGGTTTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369151.8
ENST00000493518.5
CDS-3UTR CCA 90 bp GGTGAGTTTAGATACCATACACTTCTCCAGGAGGAGTTTGACAACATGGTCACATTTCCTCCATCCTGCTaGCCCCCGGCACCCGCCCGC +
Preference number: 4 (lower is better)
Translates to: GEFRYHTLLQEEFDNMVTFPPSC*PPAPAR
Trigger: GCGGGCGGGTGCCGGGGGCCAGCAGGATGGAGGAAA...TGTGACCATGTTGTCAAACTCCTCCTGGAGAAGTGTATGGTATCTAAACTCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369151.8
ENST00000493518.5
CDS-3UTR CCA 90 bp ACAAACCAAGTAAGAAGTCCAACATCCTCTTCCATGAACAGCTTTGTGACAGAGGGCCAGGAGGGCACGTaGTGCGAGGGACTGGCCGCG +
Preference number: 4 (lower is better)
Translates to: TNQVRSPTSSSMNSFVTEGQEGT*CEGLAA
Trigger: CGCGGCCAGTCCCTCGCACCACGTGCCCTCCTGGCC...CTCTGTCACAAAGCTGTTCATGGAAGAGGATGTTGGACTTCTTACTTGGTTTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493518.5
CDS-3UTR TCA 90 bp CCTGCAGAGCAGACATGCGACAGCATCCCTGGGATGTTTCTTTTCCCCTCAAGTGGTAGCTGCACAGTGTaGGCACTGGAGATGGATGTG +
Preference number: 4 (lower is better)
Translates to: PAEQTCDSIPGMFLFPSSGSCTV*ALEMDV
Trigger: CACATCCATCTCCAGTGCTCACACTGTGCAGCTACC...ACTTGAGGGGAAAAGAAACATCCCAGGGATGCTGTCGCATGTCTGCTCTGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369151.8
CDS-3UTR TCA 90 bp GAGCAGACATGCGACAGCATCCCTGGGATGTTTCTTTTCCCCTCAAGTTCTCTGAGAGTTGGAGCCATCTaGACCCACTCTGGTCTGAGG +
Preference number: 4 (lower is better)
Translates to: EQTCDSIPGMFLFPSSSLRVGAI*THSGLR
Trigger: CCTCAGACCAGAGTGGGTTCAGATGGCTCCAACTCT...CAGAGAACTTGAGGGGAAAAGAAACATCCCAGGGATGCTGTCGCATGTCTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369151.8
CDS-3UTR GCA 90 bp CTGCAGAGCAGACATGCGACAGCATCCCTGGGATGTTTCTTTTCCCCTCAAGTTGTGCAGCCCCCACTGTaGTCTGAATACAGTCTCTGC +
Preference number: 4 (lower is better)
Translates to: LQSRHATASLGCFFSPQVVQPPL*SEYSLC
Trigger: GCAGAGACTGTATTCAGAGCACAGTGGGGGCTGCAC...AACTTGAGGGGAAAAGAAACATCCCAGGGATGCTGTCGCATGTCTGCTCTGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369151.8
ENST00000493518.5
CDS-3UTR GCA 90 bp GGTTCAAGGTGGGTCAAGGTGGGTCTTGGCCAGTGGAGGAAGGAAGGTGTCCAGATTAAAGAGATGATGTaGAGAACGCCCTGTGCTGAG +
Preference number: 4 (lower is better)
Translates to: GSRWVKVGLGQWRKEGVQIKEMM*RTPCAE
Trigger: CTCAGCACAGGGCGTTCTGCACATCATCTCTTTAAT...CTGGACACCTTCCTTCCTCCACTGGCCAAGACCCACCTTGACCCACCTTGAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369151.8
CDS-3UTR CCA 90 bp GGTGAGTTTAGATACCATACACTTCTCCAGGAGGAGTTTGACAACATGGTCACATCGGGAGCCCCTCCTTaGGGCCTTTCCTGTCCACGG +
Preference number: 4 (lower is better)
Translates to: GEFRYHTLLQEEFDNMVTSGAPP*GLSCPR
Trigger: CCGTGGACAGGAAAGGCCCCAAGGAGGGGCTCCCGA...TGTGACCATGTTGTCAAACTCCTCCTGGAGAAGTGTATGGTATCTAAACTCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369151.8
ENST00000493518.5
CDS-3UTR CCA 90 bp CTGCAGAGCAGACATGCGACAGCATCCCTGGGATGTTTCTTTTCCCCTCAAGTTAGAGATCTGGAGGGCTaGCCTGCAGCTCCTTTGAGA +
Preference number: 4 (lower is better)
Translates to: LQSRHATASLGCFFSPQVRDLEG*PAAPLR
Trigger: TCTCAAAGGAGCTGCAGGCCAGCCCTCCAGATCTCT...AACTTGAGGGGAAAAGAAACATCCCAGGGATGCTGTCGCATGTCTGCTCTGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369151.8
ENST00000493518.5
CDS-3UTR CCA 90 bp GAGCAGACATGCGACAGCATCCCTGGGATGTTTCTTTTCCCCTCAAGTTCTCTGAGAGATCTGGAGGGCTaGCCTGCAGCTCCTTTGAGA +
Preference number: 4 (lower is better)
Translates to: EQTCDSIPGMFLFPSSSLRDLEG*PAAPLR
Trigger: TCTCAAAGGAGCTGCAGGCCAGCCCTCCAGATCTCT...CAGAGAACTTGAGGGGAAAAGAAACATCCCAGGGATGCTGTCGCATGTCTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369151.8
ENST00000493518.5
CDS-3UTR CCA 90 bp GGTTCAAGGTGGGTCAAGGTGGGTCTTGGCCAGTGGAGGAAGGAAGGTGTCCAGCACCTGCCATCTTGGTaGGTGAGTTTAGATACCATA +
Preference number: 4 (lower is better)
Translates to: GSRWVKVGLGQWRKEGVQHLPSW*VSLDTI
Trigger: TATGGTATCTAAACTCACCCACCAAGATGGCAGGTG...CTGGACACCTTCCTTCCTCCACTGGCCAAGACCCACCTTGACCCACCTTGAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369151.8
CDS-3UTR CCA 90 bp CAACACTCACCCTGCAGGCTAAGTAACTGTGGTAACAGATGTGTGCTCAGTGTGCAGGCCAGAGTCCAGTaGTGTGACCTTAGCCCACTG +
Preference number: 4 (lower is better)
Translates to: QHSPCRLSNCGNRCVLSVQARVQ*CDLSPL
Trigger: CAGTGGGCTAAGGTCACACCACTGGACTCTGGCCTG...CACACTGAGCACACATCTGTTACCACAGTTACTTAGCCTGCAGGGTGAGTGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369151.8
CDS-3UTR TCA 90 bp GGAATTTATGTGTGCAAATCTGCAACCCGACAGCATGGCACGCAGCCAGGGAGTGTTGAAGGTGTGACCTaGAATGGTGTTGACTGGGCT +
Preference number: 4 (lower is better)
Translates to: GIYVCKSATRQHGTQPGSVEGVT*NGVDWA
Trigger: AGCCCAGTCAACACCATTTCAGGTCACACCTTCAAC...ACTCCCTGGCTGCGTGCCATGCTGTCGGGTTGCAGATTTGCACACATAAATTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369151.8
CDS-3UTR TCA 90 bp GGTTCAAGGTGGGTCAAGGTGGGTCTTGGCCAGTGGAGGAAGGAAGGTGTCCAGCCAATCTTGTATTCCTaGGACCAATCCATTTTGGTC +
Preference number: 4 (lower is better)
Translates to: GSRWVKVGLGQWRKEGVQPILYS*DQSILV
Trigger: GACCAAAATGGATTGGTCTCAGGAATACAAGATTGG...CTGGACACCTTCCTTCCTCCACTGGCCAAGACCCACCTTGACCCACCTTGAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369151.8
CDS-3UTR GCA 90 bp TCCTTGATACTAGAATGTTACCAGTGTAGCAACTTAAACTGTCCAGGTCATAGTCGCAGCGGAGAGGGCTaGGGTGCGCAGGGTCTCTCG +
Preference number: 4 (lower is better)
Translates to: SLILECYQCSNLNCPGHSRSGEG*GAQGLS
Trigger: CGAGAGACCCTGCGCACCGCAGCCCTCTCCGCTGCG...ACTATGACCTGGACAGTTTAAGTTGCTACACTGGTAACATTCTAGTATCAAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369151.8
CDS-3UTR GCA 90 bp CGTGCTAAAGTACCGCCCATCCCTAAACTAGAGTACTGCCAATACTATAGCAGCTCTGGAGGGCTGGCCTaGAGCTCCTTTGAGACTCTC +
Preference number: 4 (lower is better)
Translates to: RAKVPPIPKLEYCQYYSSSGGLA*SSFETL
Trigger: GAGAGTCTCAAAGGAGCTGCAGGCCAGCCCTCCAGA...GCTGCTATAGTATTGGCAGTACTCTAGTTTAGGGATGGGCGGTACTTTAGCACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369151.8
ENST00000493518.5
CDS-3UTR CCA 90 bp ATGCTGACGAGCTATTATAAGCCAACTCATCCCCAGCTCTCTTCCGGGACTGGTGCCTCCCAGTTGTTGTaGTTCTGGTCGTCCATCATC +
Preference number: 4 (lower is better)
Translates to: MLTSYYKPTHPQLSSGTGASQLL*FWSSII
Trigger: GATGATGGACGACCAGAACCACAACAACTGGGAGGC...ACCAGTCCCGGAAGAGAGCTGGGGATGAGTTGGCTTATAATAGCTCGTCAGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493518.5
CDS-3UTR CCA 90 bp CCTGCAGAGCAGACATGCGACAGCATCCCTGGGATGTTTCTTTTCCCCTCAAGTACTATCTGTACCCCCTaGAACTTGCACATGCTGACG +
Preference number: 4 (lower is better)
Translates to: PAEQTCDSIPGMFLFPSSTICTP*NLHMLT
Trigger: CGTCAGCATGTGCAAGTTCCAGGGGGTACAGATAGT...ACTTGAGGGGAAAAGAAACATCCCAGGGATGCTGTCGCATGTCTGCTCTGCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369151.8
ENST00000493518.5
CDS-3UTR CCA 90 bp CTGCAGAGCAGACATGCGACAGCATCCCTGGGATGTTTCTTTTCCCCTCAAGTTCTTGTGGCCAGAAACTaGGGTGAACTTCAGTGGGGT +
Preference number: 4 (lower is better)
Translates to: LQSRHATASLGCFFSPQVLVARN*GELQWG
Trigger: ACCCCACTGAAGTTCACCCCAGTTTCTGGCCACAAG...AACTTGAGGGGAAAAGAAACATCCCAGGGATGCTGTCGCATGTCTGCTCTGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369151.8
CDS-3UTR TCA 90 bp CCTGCAGAGCAGACATGCGACAGCATCCCTGGGATGTTTCTTTTCCCCTCAAGTATGAATATGCTCTGGTaGACCAGGGGAAAATCCGAC +
Preference number: 4 (lower is better)
Translates to: PAEQTCDSIPGMFLFPSSMNMLW*TRGKSD
Trigger: GTCGGATTTTCCCCTGGTTCACCAGAGCATATTCAT...ACTTGAGGGGAAAAGAAACATCCCAGGGATGCTGTCGCATGTCTGCTCTGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000369151.8
ENST00000493518.5
CDS-3UTR TCA 90 bp GAGCAGACATGCGACAGCATCCCTGGGATGTTTCTTTTCCCCTCAAGTTCTCTGGGGGTCCGTCTCTCCTaGGTTGTTTTCATTGCTGAT +
Preference number: 4 (lower is better)
Translates to: EQTCDSIPGMFLFPSSSLGVRLS*VVFIAD
Trigger: ATCAGCAATGAAAACAACTCAGGAGAGACGGACCCC...CAGAGAACTTGAGGGGAAAAGAAACATCCCAGGGATGCTGTCGCATGTCTGCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000369151.8
CDS-3UTR TCA 90 bp GGTTCAAGGTGGGTCAAGGTGGGTCTTGGCCAGTGGAGGAAGGAAGGTGTCCAGTCTGACTTCACTCAATaGTTTCTGAGATGCATCCAT +
Preference number: 4 (lower is better)
Translates to: GSRWVKVGLGQWRKEGVQSDFTQ*FLRCIH
Trigger: ATGGATGCATCTCAGAAATCATTGAGTGAAGTCAGA...CTGGACACCTTCCTTCCTCCACTGGCCAAGACCCACCTTGACCCACCTTGAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369151.8
CDS-3UTR TCA 90 bp CCTGCAGAGCAGACATGCGACAGCATCCCTGGGATGTTTCTTTTCCCCTCAAGTTCTGAGAAACTGGTCTaGGGGTATACAGGCCTTTCA +
Preference number: 4 (lower is better)
Translates to: PAEQTCDSIPGMFLFPSSSEKLV*GYTGLS
Trigger: TGAAAGGCCTGTATACCCTCAGACCAGTTTCTCAGA...ACTTGAGGGGAAAAGAAACATCCCAGGGATGCTGTCGCATGTCTGCTCTGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000493518.5
CDS-3UTR GCA 90 bp TCCTTGATACTAGAATGTTACCAGTGTAGCAACTTAAACTGTCCAGGTCATAGTGCCAGCGGGCACCGCTaGCTCCCCGAGTTACATCGC +
Preference number: 4 (lower is better)
Translates to: SLILECYQCSNLNCPGHSASGHR*LPELHR
Trigger: GCGATGTAACTCGGGGAGGCAGCGGTGCCCGCTGGC...ACTATGACCTGGACAGTTTAAGTTGCTACACTGGTAACATTCTAGTATCAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369151.8
CDS-3UTR GCA 90 bp GGTGAGTTTAGATACCATACACTTCTCCAGGAGGAGTTTGACAACATGGTCACATCATCGCCTCGTAGCTaGCCCCCTCCTCCTCTTCCA +
Preference number: 4 (lower is better)
Translates to: GEFRYHTLLQEEFDNMVTSSPRS*PPPPLP
Trigger: TGGAAGAGGAGGAGGGGGGCAGCTACGAGGCGATGA...TGTGACCATGTTGTCAAACTCCTCCTGGAGAAGTGTATGGTATCTAAACTCACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369151.8
ENST00000493518.5
CDS-3UTR GCA 90 bp AAGAACCTGCAGAGCAGACATGCGACAGCATCCCTGGGATGTTTCTTTTCCCCTCACAGGGAATGGAAATaGTCTAGGAGAGTTGGTCCC +
Preference number: 4 (lower is better)
Translates to: KNLQSRHATASLGCFFSPHREWK*SRRVGP
Trigger: GGGACCAACTCTCCTAGAGCATTTCCATTCCCTGTG...AGGGGAAAAGAAACATCCCAGGGATGCTGTCGCATGTCTGCTCTGCAGGTTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369151.8
ENST00000493518.5
CDS-3UTR CCA 90 bp AATCAAGGACTTCAATTATTGGGTGACTTACTTGCTCCCAATATCCCACTTCTAATTAGCCTCCGGCGGTaGCTGCGGCCCCATCGGGAG +
Preference number: 4 (lower is better)
Translates to: NQGLQLLGDLLAPNIPLLISLRR*LRPHRE
Trigger: CTCCCGATGGGGCCGCAGCCACCGCCGGAGGCTAAT...TAGAAGTGGGATATTGGGAGCAAGTAAGTCACCCAATAATTGAAGTCCTTGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369151.8
ENST00000493518.5
CDS-3UTR CCA 90 bp ACAGGGCCACACCTGCCATCTTGGTGGGTGAGTTTAGATACCATACACTTCTCCATGCGACAGCATCCCTaGGATGTTTCTTTTCCCCTC +
Preference number: 4 (lower is better)
Translates to: TGPHLPSWWVSLDTIHFSMRQHP*DVSFPL
Trigger: GAGGGGAAAAGAAACATCCCAGGGATGCTGTCGCAT...GGAGAAGTGTATGGTATCTAAACTCACCCACCAAGATGGCAGGTGTGGCCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369151.8
ENST00000493518.5
CDS-3UTR CCA 90 bp ACAAACCAAGTAAGAAGTCCAACATCCTCTTCCATGAACAGCTTTGTGACAGAGTGCAACCCGACAGCATaGCACGCAGCCAGGGAGTGG +
Preference number: 4 (lower is better)
Translates to: TNQVRSPTSSSMNSFVTECNPTA*HAAREW
Trigger: CCACTCCCTGGCTGCGTGCCATGCTGTCGGGTTGCA...CTCTGTCACAAAGCTGTTCATGGAAGAGGATGTTGGACTTCTTACTTGGTTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369151.8
CDS-3UTR CCA 90 bp CTCTCAATAATACTAAGGGAAGCTTCCGTGCTAAAGTACCGCCCATCCCTAAACCAAGGTGGGTCAAGGTaGGTCTTGGCCAGTGGAGGA +
Preference number: 4 (lower is better)
Translates to: LSIILREASVLKYRPSLNQGGSR*VLASGG
Trigger: TCCTCCACTGGCCAAGACCCACCTTGACCCACCTTG...GTTTAGGGATGGGCGGTACTTTAGCACGGAAGCTTCCCTTAGTATTATTGAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369151.8
CDS-3UTR CCA 90 bp CTGCAGAGCAGACATGCGACAGCATCCCTGGGATGTTTCTTTTCCCCTCAAGTTGATGTGTGCTCAGTGTaGCTGTCATGTAGGAGGCAA +
Preference number: 4 (lower is better)
Translates to: LQSRHATASLGCFFSPQVDVCSV*LSCRRQ
Trigger: TTGCCTCCTACATGACAGCCACACTGAGCACACATC...AACTTGAGGGGAAAAGAAACATCCCAGGGATGCTGTCGCATGTCTGCTCTGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369151.8
CDS-3UTR CCA 90 bp AGTCTGATGTTGCCTAGTAGAGAAGCCTATGCTCAATTAAGATTCAAGCAAAATGTTGGAAAGGGCAGCTaGGGGCGCGGCCAGGAGGGC +
Preference number: 4 (lower is better)
Translates to: SLMLPSREAYAQLRFKQNVGKGS*GRGQEG
Trigger: GCCCTCCTGGCCGCGCCCCCAGCTGCCCTTTCCAAC...ATTTTGCTTGAATCTTAATTGAGCATAGGCTTCTCTACTAGGCAACATCAGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493518.5
CDS-3UTR TCA 90 bp GCTCCAGTGTGTCCTCTTTTCAGGAAGGAAAGCATATTCAATACATTCACTATCAAGGGGCGGGAGCTGTaGGTCACTCCCACGCAACAG +
Preference number: 4 (lower is better)
Translates to: APVCPLFRKESIFNTFTIKGREL*VTPTQQ
Trigger: CTGTTGCGTGGGAGTGACTCACAGCTCCCGCCCCTT...GATAGTGAATGTATTGAATATGCTTTCCTTCCTGAAAAGAGGACACACTGGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493518.5
CDS-3UTR GCA 90 bp GAGCAGACATGCGACAGCATCCCTGGGATGTTTCTTTTCCCCTCAAGTTCTCTGTCTGAATACAGTCTCTaGAGCTCCAGTGTGTCCTCT +
Preference number: 4 (lower is better)
Translates to: EQTCDSIPGMFLFPSSSLSEYSL*SSSVSS
Trigger: AGAGGACACACTGGAGCTGCAGAGACTGTATTCAGA...CAGAGAACTTGAGGGGAAAAGAAACATCCCAGGGATGCTGTCGCATGTCTGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369151.8
ENST00000493518.5
CDS-3UTR CCA 90 bp CGTGCTAAAGTACCGCCCATCCCTAAACTAGAGTACTGCCAATACTATAGCAGCGCCTCCCAGTTGTTGTaGTTCTGGTCGTCCATCATC +
Preference number: 4 (lower is better)
Translates to: RAKVPPIPKLEYCQYYSSASQLL*FWSSII
Trigger: GATGATGGACGACCAGAACCACAACAACTGGGAGGC...GCTGCTATAGTATTGGCAGTACTCTAGTTTAGGGATGGGCGGTACTTTAGCACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369151.8
ENST00000493518.5
CDS-3UTR CCA 90 bp AATCAAGGACTTCAATTATTGGGTGACTTACTTGCTCCCAATATCCCACTTCTATCGGGAGCCCCTCCTTaGGGCCTTTCCTGTCCACGG +
Preference number: 4 (lower is better)
Translates to: NQGLQLLGDLLAPNIPLLSGAPP*GLSCPR
Trigger: CCGTGGACAGGAAAGGCCCCAAGGAGGGGCTCCCGA...TAGAAGTGGGATATTGGGAGCAAGTAAGTCACCCAATAATTGAAGTCCTTGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369151.8
ENST00000493518.5
CDS-3UTR GCA 90 bp CCTGCAGAGCAGACATGCGACAGCATCCCTGGGATGTTTCTTTTCCCCTCAAGTTACATCTGTTCCGAGTaGTGCTGGCATACACATTTA +
Preference number: 4 (lower is better)
Translates to: PAEQTCDSIPGMFLFPSSYICSE*CWHTHL
Trigger: TAAATGTGTATGCCAGCAGCACTCGGAACAGATGTA...ACTTGAGGGGAAAAGAAACATCCCAGGGATGCTGTCGCATGTCTGCTCTGCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369151.8
ENST00000493518.5
CDS-3UTR GCA 90 bp CAACACTCACCCTGCAGGCTAAGTAACTGTGGTAACAGATGTGTGCTCAGTGTGTCTGAATACAGTCTCTaGAGCTCCAGTGTGTCCTCT +
Preference number: 4 (lower is better)
Translates to: QHSPCRLSNCGNRCVLSVSEYSL*SSSVSS
Trigger: AGAGGACACACTGGAGCTGCAGAGACTGTATTCAGA...CACACTGAGCACACATCTGTTACCACAGTTACTTAGCCTGCAGGGTGAGTGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369151.8
CDS-3UTR GCA 90 bp GGAATTTATGTGTGCAAATCTGCAACCCGACAGCATGGCACGCAGCCAGGGAGTCTTAATAACTGTATCTaGTTCCTAGAGCATCGCAGG +
Preference number: 4 (lower is better)
Translates to: GIYVCKSATRQHGTQPGSLNNCI*FLEHRR
Trigger: CCTGCGATGCTCTAGGAAGCAGATACAGTTATTAAG...ACTCCCTGGCTGCGTGCCATGCTGTCGGGTTGCAGATTTGCACACATAAATTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369151.8
CDS-3UTR GCA 90 bp ACAGGGCCACACCTGCCATCTTGGTGGGTGAGTTTAGATACCATACACTTCTCCTTCAGTGTTCATCGATaGAATCCAGGATGCTCACAG +
Preference number: 4 (lower is better)
Translates to: TGPHLPSWWVSLDTIHFSFSVHR*NPGCSQ
Trigger: CTGTGAGCATCCTGGATTGCATCGATGAACACTGAA...GGAGAAGTGTATGGTATCTAAACTCACCCACCAAGATGGCAGGTGTGGCCCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369151.8
CDS-3UTR GCA 90 bp CTGCAGAGCAGACATGCGACAGCATCCCTGGGATGTTTCTTTTCCCCTCAAGTTGAGCCAGTTTCAGGCTaGACATACATACTAGACAGT +
Preference number: 4 (lower is better)
Translates to: LQSRHATASLGCFFSPQVEPVSG*TYILDS
Trigger: ACTGTCTAGTATGTATGTGCAGCCTGAAACTGGCTC...AACTTGAGGGGAAAAGAAACATCCCAGGGATGCTGTCGCATGTCTGCTCTGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369151.8
CDS-3UTR GCA 90 bp GGAATTTATGTGTGCAAATCTGCAACCCGACAGCATGGCACGCAGCCAGGGAGTCAGTACACATATTCATaGCACTCGGCTCTGAAAAGA +
Preference number: 4 (lower is better)
Translates to: GIYVCKSATRQHGTQPGSQYTYS*HSALKR
Trigger: TCTTTTCAGAGCCGAGTGGCATGAATATGTGTACTG...ACTCCCTGGCTGCGTGCCATGCTGTCGGGTTGCAGATTTGCACACATAAATTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369151.8
CDS-3UTR GCA 90 bp AGGAGTTTGACAACATGGTCACACAGTTGCAAAGTGCACAAAGCTCAAGGCACAGTGGCAAAAGCCTCTTaGTCGTGCTTGCCCTCCAAA +
Preference number: 4 (lower is better)
Translates to: RSLTTWSHSCKVHKAQGTVAKAS*SCLPSK
Trigger: TTTGGAGGGCAAGCACGAGCAAGAGGCTTTTGCCAC...TGTGCCTTGAGCTTTGTGCACTTTGCAACTGTGTGACCATGTTGTCAAACTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369151.8
CDS-3UTR GCA 90 bp CAACACTCACCCTGCAGGCTAAGTAACTGTGGTAACAGATGTGTGCTCAGTGTGGATCAACACTCACCCTaGAGGCTAAGTAACTGTGGT +
Preference number: 4 (lower is better)
Translates to: QHSPCRLSNCGNRCVLSVDQHSP*RLSNCG
Trigger: ACCACAGTTACTTAGCCTGCAGGGTGAGTGTTGATC...CACACTGAGCACACATCTGTTACCACAGTTACTTAGCCTGCAGGGTGAGTGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369151.8
CDS-3UTR CCA 90 bp CCTGCAGAGCAGACATGCGACAGCATCCCTGGGATGTTTCTTTTCCCCTCAAGTGGCACCATCCAATTTTaGCCAGTATGTGCTCTTATA +
Preference number: 4 (lower is better)
Translates to: PAEQTCDSIPGMFLFPSSGTIQF*PVCALI
Trigger: TATAAGAGCACATACTGGCCAAAATTGGATGGTGCC...ACTTGAGGGGAAAAGAAACATCCCAGGGATGCTGTCGCATGTCTGCTCTGCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369151.8
ENST00000493518.5
CDS-3UTR CCA 90 bp CGTGCTAAAGTACCGCCCATCCCTAAACTAGAGTACTGCCAATACTATAGCAGCACTATCTGTACCCCCTaGAACTTGCACATGCTGACG +
Preference number: 4 (lower is better)
Translates to: RAKVPPIPKLEYCQYYSSTICTP*NLHMLT
Trigger: CGTCAGCATGTGCAAGTTCCAGGGGGTACAGATAGT...GCTGCTATAGTATTGGCAGTACTCTAGTTTAGGGATGGGCGGTACTTTAGCACG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369151.8
ENST00000493518.5
CDS-3UTR CCA 90 bp CGTGCTAAAGTACCGCCCATCCCTAAACTAGAGTACTGCCAATACTATAGCAGCATGCGACAGCATCCCTaGGATGTTTCTTTTCCCCTC +
Preference number: 4 (lower is better)
Translates to: RAKVPPIPKLEYCQYYSSMRQHP*DVSFPL
Trigger: GAGGGGAAAAGAAACATCCCAGGGATGCTGTCGCAT...GCTGCTATAGTATTGGCAGTACTCTAGTTTAGGGATGGGCGGTACTTTAGCACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369151.8
ENST00000493518.5
CDS-3UTR CCA 90 bp ACAGGGCCACACCTGCCATCTTGGTGGGTGAGTTTAGATACCATACACTTCTCCTGGGGTGAACTTCAGTaGGGTAATGAAAGAAACAGG +
Preference number: 4 (lower is better)
Translates to: TGPHLPSWWVSLDTIHFSWGELQ*GNERNR
Trigger: CCTGTTTCTTTCATTACCCCACTGAAGTTCACCCCA...GGAGAAGTGTATGGTATCTAAACTCACCCACCAAGATGGCAGGTGTGGCCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369151.8
CDS-3UTR CCA 90 bp ACAAACCAAGTAAGAAGTCCAACATCCTCTTCCATGAACAGCTTTGTGACAGAGGTGGGTCTTGGCCAGTaGAGGAAGGAAGGTGTCCAG +
Preference number: 4 (lower is better)
Translates to: TNQVRSPTSSSMNSFVTEVGLGQ*RKEGVQ
Trigger: CTGGACACCTTCCTTCCTCCACTGGCCAAGACCCAC...CTCTGTCACAAAGCTGTTCATGGAAGAGGATGTTGGACTTCTTACTTGGTTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369151.8
3UTR CAA 72 bp CTTGCTCTGGCTGTGCTAGTGAGTGGCAAAAGCCTCTaGCTCGTGCTTGCCCTCCAAATTTTTCATAAGCAT +
Preference number: 4 (lower is better)
Translates to: LALAVLVSGKSL*LVLALQIFHKH
Trigger: ATGCTTATGAAAAATTTGGAGGGCAAGCACGAGCAAGAGGCTTTTGCCACTCACTAGCACAGCCAGAGCAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369151.8
CDS-3UTR TCA 90 bp CTCTCAATAATACTAAGGGAAGCTTCCGTGCTAAAGTACCGCCCATCCCTAAACGTTGAAGGTGTGACCTaGAATGGTGTTGACTGGGCT +
Preference number: 4 (lower is better)
Translates to: LSIILREASVLKYRPSLNVEGVT*NGVDWA
Trigger: AGCCCAGTCAACACCATTTCAGGTCACACCTTCAAC...GTTTAGGGATGGGCGGTACTTTAGCACGGAAGCTTCCCTTAGTATTATTGAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369151.8
ENST00000493518.5
CDS-3UTR TCA 90 bp ACAGGGCCACACCTGCCATCTTGGTGGGTGAGTTTAGATACCATACACTTCTCCAAGAAAGTTGTGAACTaGTGGGGGAAAGTTCTAGCA +
Preference number: 4 (lower is better)
Translates to: TGPHLPSWWVSLDTIHFSKKVVN*WGKVLA
Trigger: TGCTAGAACTTTCCCCCATCAGTTCACAACTTTCTT...GGAGAAGTGTATGGTATCTAAACTCACCCACCAAGATGGCAGGTGTGGCCCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369151.8
ENST00000493518.5
CDS-3UTR TCA 90 bp AAGAACCTGCAGAGCAGACATGCGACAGCATCCCTGGGATGTTTCTTTTCCCCTAGTAGAAGAAAGTTGTaGACTGATGGGGGAAAGTTC +
Preference number: 4 (lower is better)
Translates to: KNLQSRHATASLGCFFSPSRRKL*TDGGKF
Trigger: GAACTTTCCCCCATCAGTTCACAACTTTCTTCTACT...AGGGGAAAAGAAACATCCCAGGGATGCTGTCGCATGTCTGCTCTGCAGGTTCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369151.8
ENST00000493518.5
CDS-3UTR TCA 90 bp GAGCAGACATGCGACAGCATCCCTGGGATGTTTCTTTTCCCCTCAAGTTCTCTGAGTAGAAGAAAGTTGTaGACTGATGGGGGAAAGTTC +
Preference number: 4 (lower is better)
Translates to: EQTCDSIPGMFLFPSSSLSRRKL*TDGGKF
Trigger: GAACTTTCCCCCATCAGTTCACAACTTTCTTCTACT...CAGAGAACTTGAGGGGAAAAGAAACATCCCAGGGATGCTGTCGCATGTCTGCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369151.8
ENST00000493518.5
CDS-3UTR TCA 90 bp CGTGCTAAAGTACCGCCCATCCCTAAACTAGAGTACTGCCAATACTATAGCAGCATGAATATGCTCTGGTaGACCAGGGGAAAATCCGAC +
Preference number: 4 (lower is better)
Translates to: RAKVPPIPKLEYCQYYSSMNMLW*TRGKSD
Trigger: GTCGGATTTTCCCCTGGTTCACCAGAGCATATTCAT...GCTGCTATAGTATTGGCAGTACTCTAGTTTAGGGATGGGCGGTACTTTAGCACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369151.8
ENST00000493518.5
CDS-3UTR TCA 90 bp CTGCAGAGCAGACATGCGACAGCATCCCTGGGATGTTTCTTTTCCCCTCAAGTTTCATTTAAAATGAAGTaGTCAGGAACCCCACACCAC +
Preference number: 4 (lower is better)
Translates to: LQSRHATASLGCFFSPQVSFKMK*SGTPHH
Trigger: GTGGTGTGGGGTTCCTGATCACTTCATTTTAAATGA...AACTTGAGGGGAAAAGAAACATCCCAGGGATGCTGTCGCATGTCTGCTCTGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000369151.8
ENST00000493518.5
CDS-3UTR TCA 90 bp GGAATTTATGTGTGCAAATCTGCAACCCGACAGCATGGCACGCAGCCAGGGAGTAATTGTCAGAGTCACTaGATTCTGCCACATGTGATA +
Preference number: 4 (lower is better)
Translates to: GIYVCKSATRQHGTQPGSNCQSH*ILPHVI
Trigger: TATCACATGTGGCAGAATTCAGTGACTCTGACAATT...ACTCCCTGGCTGCGTGCCATGCTGTCGGGTTGCAGATTTGCACACATAAATTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369151.8
CDS-3UTR TCA 90 bp CAACACTCACCCTGCAGGCTAAGTAACTGTGGTAACAGATGTGTGCTCAGTGTGCTGAGAGGGGTATGTTaGAAATGCCCATTATGTTGG +
Preference number: 4 (lower is better)
Translates to: QHSPCRLSNCGNRCVLSVLRGVC*KCPLCW
Trigger: CCAACATAATGGGCATTTTCAACATACCCCTCTCAG...CACACTGAGCACACATCTGTTACCACAGTTACTTAGCCTGCAGGGTGAGTGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369151.8
CDS-3UTR TCA 90 bp GCACAAAGCTCAAGGCACAGAGTAGAAGAAAGTTGTGAACTGATGGGGGAAAGTTCCACCACCCTCTCCTaGGGAAACTATGTTCCTGAA +
Preference number: 4 (lower is better)
Translates to: AQSSRHRVEESCELMGESSTTLS*GNYVPE
Trigger: TTCAGGAACATAGTTTCCTCAGGAGAGGGTGGTGGA...ACTTTCCCCCATCAGTTCACAACTTTCTTCTACTCTGTGCCTTGAGCTTTGTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369151.8
CDS-3UTR TCA 90 bp CTGCAGAGCAGACATGCGACAGCATCCCTGGGATGTTTCTTTTCCCCTCAAGTTGGCATTAAAGGCAGGTaGGTGAGTTTAATAGGGTTT +
Preference number: 4 (lower is better)
Translates to: LQSRHATASLGCFFSPQVGIKGR*VSLIGF
Trigger: AAACCCTATTAAACTCACTCACCTGCCTTTAATGCC...AACTTGAGGGGAAAAGAAACATCCCAGGGATGCTGTCGCATGTCTGCTCTGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369151.8
CDS-3UTR GCA 90 bp CTGCAGAGCAGACATGCGACAGCATCCCTGGGATGTTTCTTTTCCCCTCAAGTTATCTGTTCCGAGTGCTaGTGGCATACACATTTATAC +
Preference number: 4 (lower is better)
Translates to: LQSRHATASLGCFFSPQVICSEC*WHTHLY
Trigger: GTATAAATGTGTATGCCAGCAGCACTCGGAACAGAT...AACTTGAGGGGAAAAGAAACATCCCAGGGATGCTGTCGCATGTCTGCTCTGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369151.8
ENST00000493518.5
CDS-3UTR GCA 90 bp ACTGCCATCTGTTTAACAAAACGCACTCTTCTAAGAGAATACCCAGTCTTAGTGTCTGGAGGGCTGGCCTaGAGCTCCTTTGAGACTCTC +
Preference number: 4 (lower is better)
Translates to: TAICLTKRTLLREYPVLVSGGLA*SSFETL
Trigger: GAGAGTCTCAAAGGAGCTGCAGGCCAGCCCTCCAGA...CACTAAGACTGGGTATTCTCTTAGAAGAGTGCGTTTTGTTAAACAGATGGCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369151.8
CDS-3UTR GCA 90 bp GAGCAGACATGCGACAGCATCCCTGGGATGTTTCTTTTCCCCTCAAGTTCTCTGCCTAAACTAGAGTACTaGCAATACTATAGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: EQTCDSIPGMFLFPSSSLPKLEY*QYYSSW
Trigger: CCAGCTGCTATAGTATTGGCAGTACTCTAGTTTAGG...CAGAGAACTTGAGGGGAAAAGAAACATCCCAGGGATGCTGTCGCATGTCTGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369151.8
ENST00000493518.5
CDS-3UTR CCA 90 bp CTGCAGAGCAGACATGCGACAGCATCCCTGGGATGTTTCTTTTCCCCTCAAGTTTGTTCCGAGTGCTGCTaGCATACACATTTATACACA +
Preference number: 4 (lower is better)
Translates to: LQSRHATASLGCFFSPQVCSECC*HTHLYT
Trigger: TGTGTATAAATGTGTATGCCAGCAGCACTCGGAACA...AACTTGAGGGGAAAAGAAACATCCCAGGGATGCTGTCGCATGTCTGCTCTGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369151.8
ENST00000493518.5
CDS-3UTR CCA 90 bp GGTGAGTTTAGATACCATACACTTCTCCAGGAGGAGTTTGACAACATGGTCACAGCTCTCTTCCGGGACTaGTCACCCCTTGTAAAACCA +
Preference number: 4 (lower is better)
Translates to: GEFRYHTLLQEEFDNMVTALFRD*SPLVKP
Trigger: TGGTTTTACAAGGGGTGACCAGTCCCGGAAGAGAGC...TGTGACCATGTTGTCAAACTCCTCCTGGAGAAGTGTATGGTATCTAAACTCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369151.8
ENST00000493518.5
CDS-3UTR CCA 90 bp GCACAAAGCTCAAGGCACAGAGTAGAAGAAAGTTGTGAACTGATGGGGGAAAGTCCACACCTGCCATCTTaGTGGGTGAGTTTAGATACC +
Preference number: 4 (lower is better)
Translates to: AQSSRHRVEESCELMGESPHLPS*WVSLDT
Trigger: GGTATCTAAACTCACCCACCAAGATGGCAGGTGTGG...ACTTTCCCCCATCAGTTCACAACTTTCTTCTACTCTGTGCCTTGAGCTTTGTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369151.8
ENST00000493518.5
CDS-3UTR CCA 90 bp GAGCAGACATGCGACAGCATCCCTGGGATGTTTCTTTTCCCCTCAAGTTCTCTGAAAATTCTGAGAAACTaGTCTGAGGGTATACAGGCC +
Preference number: 4 (lower is better)
Translates to: EQTCDSIPGMFLFPSSSLKILRN*SEGIQA
Trigger: GGCCTGTATACCCTCAGACCAGTTTCTCAGAATTTT...CAGAGAACTTGAGGGGAAAAGAAACATCCCAGGGATGCTGTCGCATGTCTGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000493518.5
CDS-3UTR TCA 90 bp CGTGCTAAAGTACCGCCCATCCCTAAACTAGAGTACTGCCAATACTATAGCAGCGGAACTTGCACATGCTaGCGAGCTATTATAAGCCAA +
Preference number: 4 (lower is better)
Translates to: RAKVPPIPKLEYCQYYSSGTCTC*RAIISQ
Trigger: TTGGCTTATAATAGCTCGTCAGCATGTGCAAGTTCC...GCTGCTATAGTATTGGCAGTACTCTAGTTTAGGGATGGGCGGTACTTTAGCACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369151.8
ENST00000493518.5
CDS-3UTR TCA 90 bp CAACACTCACCCTGCAGGCTAAGTAACTGTGGTAACAGATGTGTGCTCAGTGTGAAGAAAGTTGTGAACTaGTGGGGGAAAGTTCTAGCA +
Preference number: 4 (lower is better)
Translates to: QHSPCRLSNCGNRCVLSVKKVVN*WGKVLA
Trigger: TGCTAGAACTTTCCCCCATCAGTTCACAACTTTCTT...CACACTGAGCACACATCTGTTACCACAGTTACTTAGCCTGCAGGGTGAGTGTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369151.8
CDS-3UTR TCA 90 bp AAGAACCTGCAGAGCAGACATGCGACAGCATCCCTGGGATGTTTCTTTTCCCCTTCACTCAATGATTTCTaGGATGCATCCATGTTGAAG +
Preference number: 4 (lower is better)
Translates to: KNLQSRHATASLGCFFSPSLNDF*DASMLK
Trigger: CTTCAACATGGATGCATCTCAGAAATCATTGAGTGA...AGGGGAAAAGAAACATCCCAGGGATGCTGTCGCATGTCTGCTCTGCAGGTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369151.8
CDS-3UTR TCA 90 bp GAGCAGACATGCGACAGCATCCCTGGGATGTTTCTTTTCCCCTCAAGTTCTCTGATGCTGGCTCTATTCTaGCTTCACTCAATGATTTCT +
Preference number: 4 (lower is better)
Translates to: EQTCDSIPGMFLFPSSSLMLALF*LHSMIS
Trigger: AGAAATCATTGAGTGAAGTCAGAATAGAGCCAGCAT...CAGAGAACTTGAGGGGAAAAGAAACATCCCAGGGATGCTGTCGCATGTCTGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369151.8
CDS-3UTR TCA 90 bp CATACACTTCTCCAGGAGGAGTTTGACAACATGGTCACACAGTTGCAAAGTGCAAGAGTTGGAGCCATCTaGACCCACTACTATTTCAGG +
Preference number: 4 (lower is better)
Translates to: HTLLQEEFDNMVTQLQSARVGAI*THYYFR
Trigger: CCTGAAATAGTAGTGGGTTCAGATGGCTCCAACTCT...TGCACTTTGCAACTGTGTGACCATGTTGTCAAACTCCTCCTGGAGAAGTGTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493518.5
CDS-3UTR GCA 90 bp GCACAAAGCTCAAGGCACAGAGTAGAAGAAAGTTGTGAACTGATGGGGGAAAGTGCCTTAGGACAGCAGTaGTACTTCTTCCCTATCACA +
Preference number: 4 (lower is better)
Translates to: AQSSRHRVEESCELMGESALGQQ*YFFPIT
Trigger: TGTGATAGGGAAGAAGTAGCACTGCTGTCCTAAGGC...ACTTTCCCCCATCAGTTCACAACTTTCTTCTACTCTGTGCCTTGAGCTTTGTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369151.8
ENST00000493518.5
CDS-3UTR GCA 90 bp CATACACTTCTCCAGGAGGAGTTTGACAACATGGTCACACAGTTGCAAAGTGCATTATGTGTGCAAATCTaGAACCCGACAGCATGGCAC +
Preference number: 4 (lower is better)
Translates to: HTLLQEEFDNMVTQLQSALCVQI*NPTAWH
Trigger: GTGCCATGCTGTCGGGTTGCAGATTTGCACACATAA...TGCACTTTGCAACTGTGTGACCATGTTGTCAAACTCCTCCTGGAGAAGTGTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369151.8
CDS-3UTR GCA 90 bp CGTGCTAAAGTACCGCCCATCCCTAAACTAGAGTACTGCCAATACTATAGCAGCGGAACAAGACTTCATTaGTTCATCCTTGCTCTGGCT +
Preference number: 4 (lower is better)
Translates to: RAKVPPIPKLEYCQYYSSGTRLH*FILALA
Trigger: AGCCAGAGCAAGGATGAAGCAATGAAGTCTTGTTCC...GCTGCTATAGTATTGGCAGTACTCTAGTTTAGGGATGGGCGGTACTTTAGCACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369151.8
CDS-3UTR CCA 90 bp CAACACTCACCCTGCAGGCTAAGTAACTGTGGTAACAGATGTGTGCTCAGTGTGTGTTCCGAGTGCTGCTaGCATACACATTTATACACA +
Preference number: 4 (lower is better)
Translates to: QHSPCRLSNCGNRCVLSVCSECC*HTHLYT
Trigger: TGTGTATAAATGTGTATGCCAGCAGCACTCGGAACA...CACACTGAGCACACATCTGTTACCACAGTTACTTAGCCTGCAGGGTGAGTGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369151.8
CDS-3UTR CCA 90 bp CTGCAGAGCAGACATGCGACAGCATCCCTGGGATGTTTCTTTTCCCCTCAAGTTAAGGACTTCAATTATTaGGTGACTTACTTGCTCCCA +
Preference number: 4 (lower is better)
Translates to: LQSRHATASLGCFFSPQVKDFNY*VTYLLP
Trigger: TGGGAGCAAGTAAGTCACCCAATAATTGAAGTCCTT...AACTTGAGGGGAAAAGAAACATCCCAGGGATGCTGTCGCATGTCTGCTCTGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369151.8
ENST00000493518.5
CDS-3UTR CCA 90 bp GGAATTTATGTGTGCAAATCTGCAACCCGACAGCATGGCACGCAGCCAGGGAGTTTCAAATCCCTTGTTTaGTCAGTACAGAATATTGCG +
Preference number: 4 (lower is better)
Translates to: GIYVCKSATRQHGTQPGSFKSLV*SVQNIA
Trigger: CGCAATATTCTGTACTGACCAAACAAGGGATTTGAA...ACTCCCTGGCTGCGTGCCATGCTGTCGGGTTGCAGATTTGCACACATAAATTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369151.8
CDS-3UTR CCA 90 bp CATACACTTCTCCAGGAGGAGTTTGACAACATGGTCACACAGTTGCAAAGTGCAGTAACCTCCACTTCCTaGGTTCAAGTTCTTGTGCCT +
Preference number: 4 (lower is better)
Translates to: HTLLQEEFDNMVTQLQSAVTSTS*VQVLVP
Trigger: AGGCACAAGAACTTGAACCCAGGAAGTGGAGGTTAC...TGCACTTTGCAACTGTGTGACCATGTTGTCAAACTCCTCCTGGAGAAGTGTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369151.8
3UTR CAA 72 bp CTTCTCCAGGAGGAGTTTGACAACATGGTCACACAGTaGCAAAGTGCACAAAGCTCAAGGCACAGAGTAGAA +
Preference number: 4 (lower is better)
Translates to: LLQEEFDNMVTQ*QSAQSSRHRVE
Trigger: TTCTACTCTGTGCCTTGAGCTTTGTGCACTTTGCAACTGTGTGACCATGTTGTCAAACTCCTCCTGGAGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369151.8
ENST00000493518.5
CDS-3UTR TCA 90 bp AGGAGTTTGACAACATGGTCACACAGTTGCAAAGTGCACAAAGCTCAAGGCACAGGAACTTGCACATGCTaGCGAGCTATTATAAGCCAA +
Preference number: 4 (lower is better)
Translates to: RSLTTWSHSCKVHKAQGTGTCTC*RAIISQ
Trigger: TTGGCTTATAATAGCTCGTCAGCATGTGCAAGTTCC...TGTGCCTTGAGCTTTGTGCACTTTGCAACTGTGTGACCATGTTGTCAAACTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369151.8
ENST00000493518.5
CDS-3UTR TCA 90 bp AGGAGTTTGACAACATGGTCACACAGTTGCAAAGTGCACAAAGCTCAAGGCACATTTGGAGGAAGCTGCTaGTTTTGGCTGTCAGATTTC +
Preference number: 4 (lower is better)
Translates to: RSLTTWSHSCKVHKAQGTFGGSC*FWLSDF
Trigger: GAAATCTGACAGCCAAAATCAGCAGCTTCCTCCAAA...TGTGCCTTGAGCTTTGTGCACTTTGCAACTGTGTGACCATGTTGTCAAACTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369151.8
ENST00000493518.5
CDS-3UTR TCA 90 bp AAGAACCTGCAGAGCAGACATGCGACAGCATCCCTGGGATGTTTCTTTTCCCCTGTTATCCTTTTGTGCTaGAAAACGTTCAAATCCCTT +
Preference number: 4 (lower is better)
Translates to: KNLQSRHATASLGCFFSPVILLC*KTFKSL
Trigger: AAGGGATTTGAACGTTTTTCAGCACAAAAGGATAAC...AGGGGAAAAGAAACATCCCAGGGATGCTGTCGCATGTCTGCTCTGCAGGTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000369151.8
CDS-3UTR TCA 90 bp GGTGAGTTTAGATACCATACACTTCTCCAGGAGGAGTTTGACAACATGGTCACACTTGGATTAAAGAGATaGTGTGCAGAACGCCCTGTG +
Preference number: 4 (lower is better)
Translates to: GEFRYHTLLQEEFDNMVTLGLKR*CAERPV
Trigger: CACAGGGCGTTCTGCACATCATCTCTTTAATCCAAG...TGTGACCATGTTGTCAAACTCCTCCTGGAGAAGTGTATGGTATCTAAACTCACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369151.8
CDS-3UTR GCA 90 bp GAGCAGACATGCGACAGCATCCCTGGGATGTTTCTTTTCCCCTCAAGTTCTCTGGTAAATGTGCTTTTCTaGAACATGTTCCGTAAACAG +
Preference number: 4 (lower is better)
Translates to: EQTCDSIPGMFLFPSSSLVNVLF*NMFRKQ
Trigger: CTGTTTACGGAACATGTTGCAGAAAAGCACATTTAC...CAGAGAACTTGAGGGGAAAAGAAACATCCCAGGGATGCTGTCGCATGTCTGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369151.8
ENST00000493518.5
CDS-3UTR GCA 90 bp ACAAACCAAGTAAGAAGTCCAACATCCTCTTCCATGAACAGCTTTGTGACAGAGCACAGGGAATGGAAATaGTCTAGGAGAGTTGGTCCC +
Preference number: 4 (lower is better)
Translates to: TNQVRSPTSSSMNSFVTEHREWK*SRRVGP
Trigger: GGGACCAACTCTCCTAGAGCATTTCCATTCCCTGTG...CTCTGTCACAAAGCTGTTCATGGAAGAGGATGTTGGACTTCTTACTTGGTTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369151.8
ENST00000493518.5
CDS-3UTR GCA 90 bp AAGAACCTGCAGAGCAGACATGCGACAGCATCCCTGGGATGTTTCTTTTCCCCTCTGCTCACTTCTAACTaGAGAAACCAATTTTGTTTG +
Preference number: 4 (lower is better)
Translates to: KNLQSRHATASLGCFFSPLLTSN*RNQFCL
Trigger: CAAACAAAATTGGTTTCTGCAGTTAGAAGTGAGCAG...AGGGGAAAAGAAACATCCCAGGGATGCTGTCGCATGTCTGCTCTGCAGGTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369151.8
CDS-3UTR CCA 90 bp GAGCAGACATGCGACAGCATCCCTGGGATGTTTCTTTTCCCCTCAAGTTCTCTGTTAAAAGTTGATCTATaGCACCATCCAATTTTGGCC +
Preference number: 4 (lower is better)
Translates to: EQTCDSIPGMFLFPSSSLLKVDL*HHPILA
Trigger: GGCCAAAATTGGATGGTGCCATAGATCAACTTTTAA...CAGAGAACTTGAGGGGAAAAGAAACATCCCAGGGATGCTGTCGCATGTCTGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000369151.8
ENST00000493518.5
CDS-3UTR CCA 90 bp AGGAGTTTGACAACATGGTCACACAGTTGCAAAGTGCACAAAGCTCAAGGCACACACCTGCCATCTTGGTaGGTGAGTTTAGATACCATA +
Preference number: 4 (lower is better)
Translates to: RSLTTWSHSCKVHKAQGTHLPSW*VSLDTI
Trigger: TATGGTATCTAAACTCACCCACCAAGATGGCAGGTG...TGTGCCTTGAGCTTTGTGCACTTTGCAACTGTGTGACCATGTTGTCAAACTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369151.8
ENST00000493518.5
CDS-3UTR TCA 90 bp CGTGCTAAAGTACCGCCCATCCCTAAACTAGAGTACTGCCAATACTATAGCAGCAATATTTGCCATAGTTaGAGGTGTGACCTGAAATGG +
Preference number: 4 (lower is better)
Translates to: RAKVPPIPKLEYCQYYSSNICHS*RCDLKW
Trigger: CCATTTCAGGTCACACCTTCAACTATGGCAAATATT...GCTGCTATAGTATTGGCAGTACTCTAGTTTAGGGATGGGCGGTACTTTAGCACG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369151.8
ENST00000493518.5
CDS-3UTR TCA 90 bp AATCAAGGACTTCAATTATTGGGTGACTTACTTGCTCCCAATATCCCACTTCTAGAACCCACTCTGGTCTaGGGGTATACAGGCCTTTCA +
Preference number: 4 (lower is better)
Translates to: NQGLQLLGDLLAPNIPLLEPTLV*GYTGLS
Trigger: TGAAAGGCCTGTATACCCTCAGACCAGAGTGGGTTC...TAGAAGTGGGATATTGGGAGCAAGTAAGTCACCCAATAATTGAAGTCCTTGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369151.8
CDS-3UTR TCA 90 bp GGTGAGTTTAGATACCATACACTTCTCCAGGAGGAGTTTGACAACATGGTCACATTTGGAGGAAGCTGCTaGTTTTGGCTGTCAGATTTC +
Preference number: 4 (lower is better)
Translates to: GEFRYHTLLQEEFDNMVTFGGSC*FWLSDF
Trigger: GAAATCTGACAGCCAAAATCAGCAGCTTCCTCCAAA...TGTGACCATGTTGTCAAACTCCTCCTGGAGAAGTGTATGGTATCTAAACTCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369151.8
ENST00000493518.5
CDS-3UTR TCA 90 bp GCACAAAGCTCAAGGCACAGAGTAGAAGAAAGTTGTGAACTGATGGGGGAAAGTGCTCACAGAGTGAATTaGGTCCAATTAAAGTCCACA +
Preference number: 4 (lower is better)
Translates to: AQSSRHRVEESCELMGESAHRVN*VQLKST
Trigger: TGTGGACTTTAATTGGACTCAATTCACTCTGTGAGC...ACTTTCCCCCATCAGTTCACAACTTTCTTCTACTCTGTGCCTTGAGCTTTGTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369151.8
CDS-3UTR TCA 90 bp ACAAACCAAGTAAGAAGTCCAACATCCTCTTCCATGAACAGCTTTGTGACAGAGTGTTGTATTAAGAGCTaGCCCATAGCCAGCTGCAGT +
Preference number: 4 (lower is better)
Translates to: TNQVRSPTSSSMNSFVTECCIKS*PIASCS
Trigger: ACTGCAGCTGGCTATGGGTCAGCTCTTAATACAACA...CTCTGTCACAAAGCTGTTCATGGAAGAGGATGTTGGACTTCTTACTTGGTTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369151.8
CDS-3UTR TCA 90 bp TCCTTGATACTAGAATGTTACCAGTGTAGCAACTTAAACTGTCCAGGTCATAGTAGGTCCTTCAAACTGTaGTGTGCCTCAAGGGGCCAA +
Preference number: 4 (lower is better)
Translates to: SLILECYQCSNLNCPGHSRSFKL*CASRGQ
Trigger: TTGGCCCCTTGAGGCACATCACAGTTTGAAGGACCT...ACTATGACCTGGACAGTTTAAGTTGCTACACTGGTAACATTCTAGTATCAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369151.8
CDS-3UTR TCA 90 bp AGTCTGATGTTGCCTAGTAGAGAAGCCTATGCTCAATTAAGATTCAAGCAAAATCATGCCACTCGGCTCTaGAAAGAGGTTCAAGGTGGG +
Preference number: 4 (lower is better)
Translates to: SLMLPSREAYAQLRFKQNHATRL*KEVQGG
Trigger: CCCACCTTGAACCTCTTTTCAGAGCCGAGTGGCATG...ATTTTGCTTGAATCTTAATTGAGCATAGGCTTCTCTACTAGGCAACATCAGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369151.8
CDS-3UTR TCA 90 bp CGTGCTAAAGTACCGCCCATCCCTAAACTAGAGTACTGCCAATACTATAGCAGCTTGGGATTACAGGTGTaGGCCACTTTTTCTTTACAT +
Preference number: 4 (lower is better)
Translates to: RAKVPPIPKLEYCQYYSSLGLQV*ATFSLH
Trigger: ATGTAAAGAAAAAGTGGCTCACACCTGTAATCCCAA...GCTGCTATAGTATTGGCAGTACTCTAGTTTAGGGATGGGCGGTACTTTAGCACG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369151.8
CDS-3UTR GCA 90 bp AGGAGTTTGACAACATGGTCACACAGTTGCAAAGTGCACAAAGCTCAAGGCACACACAATGCTCTGCAATaGTCCCATATATTGTCCAAG +
Preference number: 4 (lower is better)
Translates to: RSLTTWSHSCKVHKAQGTHNALQ*SHILSK
Trigger: CTTGGACAATATATGGGAGCATTGCAGAGCATTGTG...TGTGCCTTGAGCTTTGTGCACTTTGCAACTGTGTGACCATGTTGTCAAACTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369151.8
ENST00000493518.5
CDS-3UTR GCA 90 bp GCACAAAGCTCAAGGCACAGAGTAGAAGAAAGTTGTGAACTGATGGGGGAAAGTAGAGGCACAATGCTCTaGAATGCTCCCATATATTGT +
Preference number: 4 (lower is better)
Translates to: AQSSRHRVEESCELMGESRGTML*NAPIYC
Trigger: ACAATATATGGGAGCATTGCAGAGCATTGTGCCTCT...ACTTTCCCCCATCAGTTCACAACTTTCTTCTACTCTGTGCCTTGAGCTTTGTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369151.8
ENST00000493518.5
CDS-3UTR GCA 90 bp AGGAGTTTGACAACATGGTCACACAGTTGCAAAGTGCACAAAGCTCAAGGCACAAGAGGCACAATGCTCTaGAATGCTCCCATATATTGT +
Preference number: 4 (lower is better)
Translates to: RSLTTWSHSCKVHKAQGTRGTML*NAPIYC
Trigger: ACAATATATGGGAGCATTGCAGAGCATTGTGCCTCT...TGTGCCTTGAGCTTTGTGCACTTTGCAACTGTGTGACCATGTTGTCAAACTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369151.8
ENST00000493518.5
CDS-3UTR GCA 90 bp AGGAGTTTGACAACATGGTCACACAGTTGCAAAGTGCACAAAGCTCAAGGCACACTTAATAACTGTATCTaGTTCCTAGAGCATCGCAGG +
Preference number: 4 (lower is better)
Translates to: RSLTTWSHSCKVHKAQGTLNNCI*FLEHRR
Trigger: CCTGCGATGCTCTAGGAAGCAGATACAGTTATTAAG...TGTGCCTTGAGCTTTGTGCACTTTGCAACTGTGTGACCATGTTGTCAAACTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369151.8
ENST00000493518.5
CDS-3UTR GCA 90 bp GGTGAGTTTAGATACCATACACTTCTCCAGGAGGAGTTTGACAACATGGTCACAAAAGCCTCTTGCTCGTaGTTGCCCTCCAAATTTTTC +
Preference number: 4 (lower is better)
Translates to: GEFRYHTLLQEEFDNMVTKASCS*LPSKFF
Trigger: GAAAAATTTGGAGGGCAAGCACGAGCAAGAGGCTTT...TGTGACCATGTTGTCAAACTCCTCCTGGAGAAGTGTATGGTATCTAAACTCACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369151.8
CDS-3UTR GCA 90 bp AGGAGTTTGACAACATGGTCACACAGTTGCAAAGTGCACAAAGCTCAAGGCACAGTTCATATTATGAAGTaGTTCCAAGTCCCCGTTCTC +
Preference number: 4 (lower is better)
Translates to: RSLTTWSHSCKVHKAQGTVHIMK*FQVPVL
Trigger: GAGAACGGGGACTTGGAAGCACTTCATAATATGAAC...TGTGCCTTGAGCTTTGTGCACTTTGCAACTGTGTGACCATGTTGTCAAACTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369151.8
CDS-3UTR GCA 90 bp CAACACTCACCCTGCAGGCTAAGTAACTGTGGTAACAGATGTGTGCTCAGTGTGTCAACAACACACTTTTaGAAAATTGGTGGATGGAAC +
Preference number: 4 (lower is better)
Translates to: QHSPCRLSNCGNRCVLSVSTTHF*KIGGWN
Trigger: GTTCCATCCACCAATTTTGCAAAAGTGTGTTGTTGA...CACACTGAGCACACATCTGTTACCACAGTTACTTAGCCTGCAGGGTGAGTGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369151.8
CDS-3UTR CCA 90 bp CTCTCAATAATACTAAGGGAAGCTTCCGTGCTAAAGTACCGCCCATCCCTAAACGGCACCATCCAATTTTaGCCAGTATGTGCTCTTATA +
Preference number: 4 (lower is better)
Translates to: LSIILREASVLKYRPSLNGTIQF*PVCALI
Trigger: TATAAGAGCACATACTGGCCAAAATTGGATGGTGCC...GTTTAGGGATGGGCGGTACTTTAGCACGGAAGCTTCCCTTAGTATTATTGAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369151.8
ENST00000493518.5
CDS-3UTR CCA 90 bp CTCTCAATAATACTAAGGGAAGCTTCCGTGCTAAAGTACCGCCCATCCCTAAACTCTGTTCATAGGATATaGGGATATAGTCACCAGGAC +
Preference number: 4 (lower is better)
Translates to: LSIILREASVLKYRPSLNSVHRI*GYSHQD
Trigger: GTCCTGGTGACTATATCCCCATATCCTATGAACAGA...GTTTAGGGATGGGCGGTACTTTAGCACGGAAGCTTCCCTTAGTATTATTGAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369151.8
ENST00000493518.5
CDS-3UTR CCA 90 bp AGGAGTTTGACAACATGGTCACACAGTTGCAAAGTGCACAAAGCTCAAGGCACATCTGTTCATAGGATATaGGGATATAGTCACCAGGAC +
Preference number: 4 (lower is better)
Translates to: RSLTTWSHSCKVHKAQGTSVHRI*GYSHQD
Trigger: GTCCTGGTGACTATATCCCCATATCCTATGAACAGA...TGTGCCTTGAGCTTTGTGCACTTTGCAACTGTGTGACCATGTTGTCAAACTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369151.8
ENST00000493518.5
CDS-3UTR CCA 90 bp CTGCAGAGCAGACATGCGACAGCATCCCTGGGATGTTTCTTTTCCCCTCAAGTTAAAAATAAACTGAATTaGCAGAGGCAGCTGTATGAA +
Preference number: 4 (lower is better)
Translates to: LQSRHATASLGCFFSPQVKNKLN*QRQLYE
Trigger: TTCATACAGCTGCCTCTGCCAATTCAGTTTATTTTT...AACTTGAGGGGAAAAGAAACATCCCAGGGATGCTGTCGCATGTCTGCTCTGCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369151.8
ENST00000493518.5
CDS-3UTR CCA 90 bp CTCTCAATAATACTAAGGGAAGCTTCCGTGCTAAAGTACCGCCCATCCCTAAACTTTCTCATATTCTTGTaGCCAGAAACTGGGGTGAAC +
Preference number: 4 (lower is better)
Translates to: LSIILREASVLKYRPSLNFLIFL*PETGVN
Trigger: GTTCACCCCAGTTTCTGGCCACAAGAATATGAGAAA...GTTTAGGGATGGGCGGTACTTTAGCACGGAAGCTTCCCTTAGTATTATTGAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369151.8
CDS-3UTR CCA 90 bp ACAAACCAAGTAAGAAGTCCAACATCCTCTTCCATGAACAGCTTTGTGACAGAGGTGCTGAGCTCACTATaGCTTCTGACATACAAGCAC +
Preference number: 4 (lower is better)
Translates to: TNQVRSPTSSSMNSFVTEVLSSL*LLTYKH
Trigger: GTGCTTGTATGTCAGAAGCCATAGTGAGCTCAGCAC...CTCTGTCACAAAGCTGTTCATGGAAGAGGATGTTGGACTTCTTACTTGGTTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369151.8
CDS-3UTR CCA 90 bp AGGAGTTTGACAACATGGTCACACAGTTGCAAAGTGCACAAAGCTCAAGGCACAGGAAGGGATGAGAACTaGCATTCTGACAATACTGTA +
Preference number: 4 (lower is better)
Translates to: RSLTTWSHSCKVHKAQGTGRDEN*HSDNTV
Trigger: TACAGTATTGTCAGAATGCCAGTTCTCATCCCTTCC...TGTGCCTTGAGCTTTGTGCACTTTGCAACTGTGTGACCATGTTGTCAAACTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369151.8
CDS-3UTR TCA 90 bp CGTGCTAAAGTACCGCCCATCCCTAAACTAGAGTACTGCCAATACTATAGCAGCACTTCAATTATTGGGTaGCTTACTTGCTCCCAATAT +
Preference number: 4 (lower is better)
Translates to: RAKVPPIPKLEYCQYYSSTSIIG*LTCSQY
Trigger: ATATTGGGAGCAAGTAAGTCACCCAATAATTGAAGT...GCTGCTATAGTATTGGCAGTACTCTAGTTTAGGGATGGGCGGTACTTTAGCACG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369151.8
ENST00000493518.5
CDS-3UTR TCA 90 bp AGGAGTTTGACAACATGGTCACACAGTTGCAAAGTGCACAAAGCTCAAGGCACACATGCAAACTCTTCCTaGGGAATTTATGTGTGCAAA +
Preference number: 4 (lower is better)
Translates to: RSLTTWSHSCKVHKAQGTHANSS*GIYVCK
Trigger: TTTGCACACATAAATTCCTCAGGAAGAGTTTGCATG...TGTGCCTTGAGCTTTGTGCACTTTGCAACTGTGTGACCATGTTGTCAAACTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369151.8
CDS-3UTR GCA 90 bp GGTGAGTTTAGATACCATACACTTCTCCAGGAGGAGTTTGACAACATGGTCACAACATGGTCACACAGTTaGAAAGTGCACAAAGCTCAA +
Preference number: 4 (lower is better)
Translates to: GEFRYHTLLQEEFDNMVTTWSHS*KVHKAQ
Trigger: TTGAGCTTTGTGCACTTTGCAACTGTGTGACCATGT...TGTGACCATGTTGTCAAACTCCTCCTGGAGAAGTGTATGGTATCTAAACTCACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369151.8
ENST00000493518.5
CDS-3UTR GCA 90 bp ACTGCCATCTGTTTAACAAAACGCACTCTTCTAAGAGAATACCCAGTCTTAGTGATCATCATAGCTCAATaGAGCCTCAAACTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: TAICLTKRTLLREYPVLVIIIAQ*SLKLLG
Trigger: GCCCAGGAGTTTGAGGCTGCATTGAGCTATGATGAT...CACTAAGACTGGGTATTCTCTTAGAAGAGTGCGTTTTGTTAAACAGATGGCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369151.8
CDS-3UTR CCA 90 bp AGTCTGATGTTGCCTAGTAGAGAAGCCTATGCTCAATTAAGATTCAAGCAAAATGCACAGTGTGAGCACTaGAGATGGATGTGCAGTGTG +
Preference number: 4 (lower is better)
Translates to: SLMLPSREAYAQLRFKQNAQCEH*RWMCSV
Trigger: CACACTGCACATCCATCTCCAGTGCTCACACTGTGC...ATTTTGCTTGAATCTTAATTGAGCATAGGCTTCTCTACTAGGCAACATCAGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369151.8
CDS-3UTR CCA 90 bp AGTCTGATGTTGCCTAGTAGAGAAGCCTATGCTCAATTAAGATTCAAGCAAAATGGCTGTGCTAGTGAGTaGCAAAAGCCTCTTGCTCGT +
Preference number: 4 (lower is better)
Translates to: SLMLPSREAYAQLRFKQNGCASE*QKPLAR
Trigger: ACGAGCAAGAGGCTTTTGCCACTCACTAGCACAGCC...ATTTTGCTTGAATCTTAATTGAGCATAGGCTTCTCTACTAGGCAACATCAGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369151.8
3UTR CAA 72 bp GTTCATCGATGCAATCCAGGATGCTCACAGAGTGAATaGAGTCCAATTAAAGTCCACAAAATCCACGAACTC +
Preference number: 4 (lower is better)
Translates to: VHRCNPGCSQSE*SPIKVHKIHEL
Trigger: GAGTTCGTGGATTTTGTGGACTTTAATTGGACTCAATTCACTCTGTGAGCATCCTGGATTGCATCGATGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369151.8
3UTR CAA 72 bp AGTGCTAGTTCCCCTCACAATCCATTCAGAAAGGTCTaGGATATCCTTGGCCCTTTGCTCTTCCATTTATAT +
Preference number: 4 (lower is better)
Translates to: SASSPHNPFRKV*DILGPLLFHLY
Trigger: ATATAAATGGAAGAGCAAAGGGCCAAGGATATCCAAGACCTTTCTGAATGGATTGTGAGGGGAACTAGCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369151.8
CDS-3UTR TCA 90 bp GGTGAGTTTAGATACCATACACTTCTCCAGGAGGAGTTTGACAACATGGTCACAAGAGATCCTGACATGTaGAACCAATACACCAAAATG +
Preference number: 4 (lower is better)
Translates to: GEFRYHTLLQEEFDNMVTRDPDM*NQYTKM
Trigger: CATTTTGGTGTATTGGTTTCACATGTCAGGATCTCT...TGTGACCATGTTGTCAAACTCCTCCTGGAGAAGTGTATGGTATCTAAACTCACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369151.8
ENST00000493518.5
CDS-3UTR TCA 90 bp GGTGAGTTTAGATACCATACACTTCTCCAGGAGGAGTTTGACAACATGGTCACATCCCCAACATTAATATaGATATGCTCTGGTGAACCA +
Preference number: 4 (lower is better)
Translates to: GEFRYHTLLQEEFDNMVTSPTLI*ICSGEP
Trigger: TGGTTCACCAGAGCATATTCATATTAATGTTGGGGA...TGTGACCATGTTGTCAAACTCCTCCTGGAGAAGTGTATGGTATCTAAACTCACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369151.8
ENST00000493518.5
CDS-3UTR TCA 90 bp AGGAGTTTGACAACATGGTCACACAGTTGCAAAGTGCACAAAGCTCAAGGCACAACTTCAATTATTGGGTaGCTTACTTGCTCCCAATAT +
Preference number: 4 (lower is better)
Translates to: RSLTTWSHSCKVHKAQGTTSIIG*LTCSQY
Trigger: ATATTGGGAGCAAGTAAGTCACCCAATAATTGAAGT...TGTGCCTTGAGCTTTGTGCACTTTGCAACTGTGTGACCATGTTGTCAAACTCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369151.8
ENST00000493518.5
CDS-3UTR TCA 90 bp GCACAAAGCTCAAGGCACAGAGTAGAAGAAAGTTGTGAACTGATGGGGGAAAGTGTTTTGTATCTTCAATaGTTTGGGCCTTTAGTGATG +
Preference number: 4 (lower is better)
Translates to: AQSSRHRVEESCELMGESVLYLQ*FGPLVM
Trigger: CATCACTAAAGGCCCAAATCATTGAAGATACAAAAC...ACTTTCCCCCATCAGTTCACAACTTTCTTCTACTCTGTGCCTTGAGCTTTGTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369151.8
CDS-3UTR TCA 90 bp ACAAACCAAGTAAGAAGTCCAACATCCTCTTCCATGAACAGCTTTGTGACAGAGGTTAGGGTACAGGTGTaGCAACAAAAGGTCACAAAA +
Preference number: 4 (lower is better)
Translates to: TNQVRSPTSSSMNSFVTEVRVQV*QQKVTK
Trigger: TTTTGTGACCTTTTGTTGTCACACCTGTACCCTAAC...CTCTGTCACAAAGCTGTTCATGGAAGAGGATGTTGGACTTCTTACTTGGTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369151.8
CDS-3UTR GCA 90 bp ACAAACCAAGTAAGAAGTCCAACATCCTCTTCCATGAACAGCTTTGTGACAGAGTACATCTGTTCCGAGTaGTGCTGGCATACACATTTA +
Preference number: 4 (lower is better)
Translates to: TNQVRSPTSSSMNSFVTEYICSE*CWHTHL
Trigger: TAAATGTGTATGCCAGCAGCACTCGGAACAGATGTA...CTCTGTCACAAAGCTGTTCATGGAAGAGGATGTTGGACTTCTTACTTGGTTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369151.8
ENST00000493518.5
CDS-3UTR GCA 90 bp ACAAACCAAGTAAGAAGTCCAACATCCTCTTCCATGAACAGCTTTGTGACAGAGCACAATGCTCTGCAATaGTCCCATATATTGTCCAAG +
Preference number: 4 (lower is better)
Translates to: TNQVRSPTSSSMNSFVTEHNALQ*SHILSK
Trigger: CTTGGACAATATATGGGAGCATTGCAGAGCATTGTG...CTCTGTCACAAAGCTGTTCATGGAAGAGGATGTTGGACTTCTTACTTGGTTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369151.8
ENST00000493518.5
CDS-3UTR GCA 90 bp ACTGCCATCTGTTTAACAAAACGCACTCTTCTAAGAGAATACCCAGTCTTAGTGACCAGACAACCAGCCTaGATGTACGGTTTTGTATCT +
Preference number: 4 (lower is better)
Translates to: TAICLTKRTLLREYPVLVTRQPA*MYGFVS
Trigger: AGATACAAAACCGTACATGCAGGCTGGTTGTCTGGT...CACTAAGACTGGGTATTCTCTTAGAAGAGTGCGTTTTGTTAAACAGATGGCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369151.8
CDS-3UTR GCA 90 bp GGTGAGTTTAGATACCATACACTTCTCCAGGAGGAGTTTGACAACATGGTCACAAGGGAGGGTAATTGCTaGAAATTTGTTAAAGGGACA +
Preference number: 4 (lower is better)
Translates to: GEFRYHTLLQEEFDNMVTREGNC*KFVKGT
Trigger: TGTCCCTTTAACAAATTTGCAGCAATTACCCTCCCT...TGTGACCATGTTGTCAAACTCCTCCTGGAGAAGTGTATGGTATCTAAACTCACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369151.8
CDS-3UTR GCA 90 bp ACAAACCAAGTAAGAAGTCCAACATCCTCTTCCATGAACAGCTTTGTGACAGAGGGACATCCATTCTTCTaGAATCTCATCTACCCACAA +
Preference number: 4 (lower is better)
Translates to: TNQVRSPTSSSMNSFVTEGHPFF*NLIYPQ
Trigger: TTGTGGGTAGATGAGATTGCAGAAGAATGGATGTCC...CTCTGTCACAAAGCTGTTCATGGAAGAGGATGTTGGACTTCTTACTTGGTTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369151.8
CDS-3UTR GCA 90 bp ACAAACCAAGTAAGAAGTCCAACATCCTCTTCCATGAACAGCTTTGTGACAGAGGTCAGTACAGAATATTaGGAGGTGATGCTCATGCAA +
Preference number: 4 (lower is better)
Translates to: TNQVRSPTSSSMNSFVTEVSTEY*EVMLMQ
Trigger: TTGCATGAGCATCACCTCGCAATATTCTGTACTGAC...CTCTGTCACAAAGCTGTTCATGGAAGAGGATGTTGGACTTCTTACTTGGTTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369151.8
CDS-3UTR GCA 90 bp TCCTTGATACTAGAATGTTACCAGTGTAGCAACTTAAACTGTCCAGGTCATAGTTTACCTTTGCTAGTATaGGTACAGACCACCACTCGG +
Preference number: 4 (lower is better)
Translates to: SLILECYQCSNLNCPGHSLPLLV*VQTTTR
Trigger: CCGAGTGGTGGTCTGTACGCATACTAGCAAAGGTAA...ACTATGACCTGGACAGTTTAAGTTGCTACACTGGTAACATTCTAGTATCAAGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369151.8
CDS-3UTR CCA 90 bp CCAGTATGTAATTGGGGTAGAAAAACCATATACTGTACTGGCAAGAATACAAAACAGTTGTTGTGGTTCTaGTCGTCCATCATCGCCTCG +
Preference number: 4 (lower is better)
Translates to: PVCNWGRKTIYCTGKNTKQLLWF*SSIIAS
Trigger: CGAGGCGATGATGGACGACCAGAACCACAACAACTG...TTTTGTATTCTTGCCAGTACAGTATATGGTTTTTCTACCCCAATTACATACTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369151.8
CDS-3UTR CCA 90 bp TTCAATACATTCACTATCTGTACCCCCTGGAACTTGCACATGCTGACGAGCTATAAGGACTTCAATTATTaGGTGACTTACTTGCTCCCA +
Preference number: 4 (lower is better)
Translates to: FNTFTICTPWNLHMLTSYKDFNY*VTYLLP
Trigger: TGGGAGCAAGTAAGTCACCCAATAATTGAAGTCCTT...ATAGCTCGTCAGCATGTGCAAGTTCCAGGGGGTACAGATAGTGAATGTATTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493518.5
CDS-3UTR CCA 90 bp AGGAGTTTGACAACATGGTCACACAGTTGCAAAGTGCACAAAGCTCAAGGCACAGTATCTTCAATGATTTaGGCCTTTAGTGATGTGGTA +
Preference number: 4 (lower is better)
Translates to: RSLTTWSHSCKVHKAQGTVSSMI*AFSDVV
Trigger: TACCACATCACTAAAGGCCCAAATCATTGAAGATAC...TGTGCCTTGAGCTTTGTGCACTTTGCAACTGTGTGACCATGTTGTCAAACTCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369151.8
CDS-3UTR TCA 90 bp AATCAAGGACTTCAATTATTGGGTGACTTACTTGCTCCCAATATCCCACTTCTACAGAATATTGCGAGGTaGTGCTCATGCAAACTCTTC +
Preference number: 4 (lower is better)
Translates to: NQGLQLLGDLLAPNIPLLQNIAR*CSCKLF
Trigger: GAAGAGTTTGCATGAGCATCACCTCGCAATATTCTG...TAGAAGTGGGATATTGGGAGCAAGTAAGTCACCCAATAATTGAAGTCCTTGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369151.8
CDS-3UTR TCA 90 bp CCAGTATGTAATTGGGGTAGAAAAACCATATACTGTACTGGCAAGAATACAAAATGTGGGGCAGGGGAGTaGAAATGGAAATTGTCAGAG +
Preference number: 4 (lower is better)
Translates to: PVCNWGRKTIYCTGKNTKCGAGE*KWKLSE
Trigger: CTCTGACAATTTCCATTTTCACTCCCCTGCCCCACA...TTTTGTATTCTTGCCAGTACAGTATATGGTTTTTCTACCCCAATTACATACTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000369151.8
CDS-3UTR GCA 90 bp ACAAACCAAGTAAGAAGTCCAACATCCTCTTCCATGAACAGCTTTGTGACAGAGCAAAGGGAGGGTAATTaGTGCAAATTTGTTAAAGGG +
Preference number: 4 (lower is better)
Translates to: TNQVRSPTSSSMNSFVTEQREGN*CKFVKG
Trigger: CCCTTTAACAAATTTGCAGCAATTACCCTCCCTTTG...CTCTGTCACAAAGCTGTTCATGGAAGAGGATGTTGGACTTCTTACTTGGTTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369151.8
CDS-3UTR CCA 90 bp CCAGTATGTAATTGGGGTAGAAAAACCATATACTGTACTGGCAAGAATACAAAAAAAAGAGGTTCAAGGTaGGTCAAGGTGGGTCTTGGC +
Preference number: 4 (lower is better)
Translates to: PVCNWGRKTIYCTGKNTKKRGSR*VKVGLG
Trigger: GCCAAGACCCACCTTGACCCACCTTGAACCTCTTTT...TTTTGTATTCTTGCCAGTACAGTATATGGTTTTTCTACCCCAATTACATACTGG
41% GC, longest homopolymer 8 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000369151.8
CDS-3UTR TCA 90 bp TCCTTGATACTAGAATGTTACCAGTGTAGCAACTTAAACTGTCCAGGTCATAGTTCATTTAAAATGAAGTaGTCAGGAACCCCACACCAC +
Preference number: 4 (lower is better)
Translates to: SLILECYQCSNLNCPGHSSFKMK*SGTPHH
Trigger: GTGGTGTGGGGTTCCTGATCACTTCATTTTAAATGA...ACTATGACCTGGACAGTTTAAGTTGCTACACTGGTAACATTCTAGTATCAAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369151.8
CDS-3UTR TCA 90 bp CCAGTATGTAATTGGGGTAGAAAAACCATATACTGTACTGGCAAGAATACAAAAAAGCAAATCAGCCATTaGCTAACCAGACAACCAGCC +
Preference number: 4 (lower is better)
Translates to: PVCNWGRKTIYCTGKNTKKQISH*LTRQPA
Trigger: GGCTGGTTGTCTGGTTAGTCAATGGCTGATTTGCTT...TTTTGTATTCTTGCCAGTACAGTATATGGTTTTTCTACCCCAATTACATACTGG
40% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000369151.8
CDS-3UTR TCA 90 bp ACTGCCATCTGTTTAACAAAACGCACTCTTCTAAGAGAATACCCAGTCTTAGTGAGTTGTTTTCATTGCTaGTTTGCATTCAGGTGCTCT +
Preference number: 4 (lower is better)
Translates to: TAICLTKRTLLREYPVLVSCFHC*FAFRCS
Trigger: AGAGCACCTGAATGCAAATCAGCAATGAAAACAACT...CACTAAGACTGGGTATTCTCTTAGAAGAGTGCGTTTTGTTAAACAGATGGCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369151.8
CDS-3UTR GCA 90 bp AATCAAGGACTTCAATTATTGGGTGACTTACTTGCTCCCAATATCCCACTTCTAATCTGTTCCGAGTGCTaGTGGCATACACATTTATAC +
Preference number: 4 (lower is better)
Translates to: NQGLQLLGDLLAPNIPLLICSEC*WHTHLY
Trigger: GTATAAATGTGTATGCCAGCAGCACTCGGAACAGAT...TAGAAGTGGGATATTGGGAGCAAGTAAGTCACCCAATAATTGAAGTCCTTGATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369151.8
ENST00000493518.5
CDS-3UTR GCA 90 bp ACAAACCAAGTAAGAAGTCCAACATCCTCTTCCATGAACAGCTTTGTGACAGAGGTAAATGTGCTTTTCTaGAACATGTTCCGTAAACAG +
Preference number: 4 (lower is better)
Translates to: TNQVRSPTSSSMNSFVTEVNVLF*NMFRKQ
Trigger: CTGTTTACGGAACATGTTGCAGAAAAGCACATTTAC...CTCTGTCACAAAGCTGTTCATGGAAGAGGATGTTGGACTTCTTACTTGGTTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369151.8
ENST00000493518.5
CDS-3UTR GCA 90 bp AGTCTGATGTTGCCTAGTAGAGAAGCCTATGCTCAATTAAGATTCAAGCAAAATCGATGCAATCCAGGATaGTCACAGAGTGAATTGAGT +
Preference number: 4 (lower is better)
Translates to: SLMLPSREAYAQLRFKQNRCNPG*SQSELS
Trigger: ACTCAATTCACTCTGTGAGCATCCTGGATTGCATCG...ATTTTGCTTGAATCTTAATTGAGCATAGGCTTCTCTACTAGGCAACATCAGACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369151.8
CDS-3UTR GCA 90 bp ACAAACCAAGTAAGAAGTCCAACATCCTCTTCCATGAACAGCTTTGTGACAGAGCTAATGAGAGTGAACTaGCATCTGTTTAACAAAACG +
Preference number: 4 (lower is better)
Translates to: TNQVRSPTSSSMNSFVTELMRVN*HLFNKT
Trigger: CGTTTTGTTAAACAGATGGCAGTTCACTCTCATTAG...CTCTGTCACAAAGCTGTTCATGGAAGAGGATGTTGGACTTCTTACTTGGTTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369151.8
CDS-3UTR CCA 90 bp GGTGAGTTTAGATACCATACACTTCTCCAGGAGGAGTTTGACAACATGGTCACAAAAAATAAACTGAATTaGCAGAGGCAGCTGTATGAA +
Preference number: 4 (lower is better)
Translates to: GEFRYHTLLQEEFDNMVTKNKLN*QRQLYE
Trigger: TTCATACAGCTGCCTCTGCCAATTCAGTTTATTTTT...TGTGACCATGTTGTCAAACTCCTCCTGGAGAAGTGTATGGTATCTAAACTCACC
40% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000369151.8
ENST00000493518.5
CDS-3UTR CCA 90 bp TCCTTGATACTAGAATGTTACCAGTGTAGCAACTTAAACTGTCCAGGTCATAGTGGGCCTTTAGTGATGTaGTACAAAACCCAGTATGTA +
Preference number: 4 (lower is better)
Translates to: SLILECYQCSNLNCPGHSGPLVM*YKTQYV
Trigger: TACATACTGGGTTTTGTACCACATCACTAAAGGCCC...ACTATGACCTGGACAGTTTAAGTTGCTACACTGGTAACATTCTAGTATCAAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369151.8
CDS-3UTR CCA 90 bp ACTGCCATCTGTTTAACAAAACGCACTCTTCTAAGAGAATACCCAGTCTTAGTGATTGTTATGCCCTTCTaGCTTAACAATTTAGGGAGG +
Preference number: 4 (lower is better)
Translates to: TAICLTKRTLLREYPVLVIVMPF*LNNLGR
Trigger: CCTCCCTAAATTGTTAAGCCAGAAGGGCATAACAAT...CACTAAGACTGGGTATTCTCTTAGAAGAGTGCGTTTTGTTAAACAGATGGCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369151.8
CDS-3UTR CCA 90 bp AATCAAGGACTTCAATTATTGGGTGACTTACTTGCTCCCAATATCCCACTTCTAACAATAGTGCAATCTTaGTTCACTGAAACCTCTGCC +
Preference number: 4 (lower is better)
Translates to: NQGLQLLGDLLAPNIPLLTIVQS*FTETSA
Trigger: GGCAGAGGTTTCAGTGAACCAAGATTGCACTATTGT...TAGAAGTGGGATATTGGGAGCAAGTAAGTCACCCAATAATTGAAGTCCTTGATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369151.8
3UTR CAA 72 bp TATCCTTTTGTGCTGAAAAACGTTCAAATCCCTTGTTaGGTCAGTACAGAATATTGCGAGGTGATGCTCATG +
Preference number: 4 (lower is better)
Translates to: YPFVLKNVQIPC*VSTEYCEVMLM
Trigger: CATGAGCATCACCTCGCAATATTCTGTACTGACCAAACAAGGGATTTGAACGTTTTTCAGCACAAAAGGATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369151.8
3UTR CAA 72 bp ATATTCAATACATTCACTATCTGTACCCCCTGGAACTaGCACATGCTGACGAGCTATTATAAGCCAACTCAT +
Preference number: 4 (lower is better)
Translates to: IFNTFTICTPWN*HMLTSYYKPTH
Trigger: ATGAGTTGGCTTATAATAGCTCGTCAGCATGTGCAAGTTCCAGGGGGTACAGATAGTGAATGTATTGAATAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493518.5
CDS-3UTR TCA 90 bp AATCAAGGACTTCAATTATTGGGTGACTTACTTGCTCCCAATATCCCACTTCTAAATATTTGCCATAGTTaGAGGTGTGACCTGAAATGG +
Preference number: 4 (lower is better)
Translates to: NQGLQLLGDLLAPNIPLLNICHS*RCDLKW
Trigger: CCATTTCAGGTCACACCTTCAACTATGGCAAATATT...TAGAAGTGGGATATTGGGAGCAAGTAAGTCACCCAATAATTGAAGTCCTTGATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369151.8
ENST00000493518.5
CDS-3UTR TCA 90 bp AGTCTGATGTTGCCTAGTAGAGAAGCCTATGCTCAATTAAGATTCAAGCAAAATGAAATGGTCACTTTCTaGGATGCTTTTTCCTCACAG +
Preference number: 4 (lower is better)
Translates to: SLMLPSREAYAQLRFKQNEMVTF*DAFSSQ
Trigger: CTGTGAGGAAAAAGCATCTCAGAAAGTGACCATTTC...ATTTTGCTTGAATCTTAATTGAGCATAGGCTTCTCTACTAGGCAACATCAGACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369151.8
ENST00000493518.5
CDS-3UTR TCA 90 bp AATCAAGGACTTCAATTATTGGGTGACTTACTTGCTCCCAATATCCCACTTCTAAGAGATCCTGACATGTaGAACCAATACACCAAAATG +
Preference number: 4 (lower is better)
Translates to: NQGLQLLGDLLAPNIPLLRDPDM*NQYTKM
Trigger: CATTTTGGTGTATTGGTTTCACATGTCAGGATCTCT...TAGAAGTGGGATATTGGGAGCAAGTAAGTCACCCAATAATTGAAGTCCTTGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369151.8
ENST00000493518.5
CDS-3UTR TCA 90 bp AATCAAGGACTTCAATTATTGGGTGACTTACTTGCTCCCAATATCCCACTTCTATCCCCAACATTAATATaGATATGCTCTGGTGAACCA +
Preference number: 4 (lower is better)
Translates to: NQGLQLLGDLLAPNIPLLSPTLI*ICSGEP
Trigger: TGGTTCACCAGAGCATATTCATATTAATGTTGGGGA...TAGAAGTGGGATATTGGGAGCAAGTAAGTCACCCAATAATTGAAGTCCTTGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369151.8
ENST00000493518.5
CDS-3UTR TCA 90 bp TCCTTGATACTAGAATGTTACCAGTGTAGCAACTTAAACTGTCCAGGTCATAGTTACATACTAGACAGTTaGAGCAAATCAGCCATTGAC +
Preference number: 4 (lower is better)
Translates to: SLILECYQCSNLNCPGHSYILDS*SKSAID
Trigger: GTCAATGGCTGATTTGCTTCAACTGTCTAGTATGTA...ACTATGACCTGGACAGTTTAAGTTGCTACACTGGTAACATTCTAGTATCAAGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369151.8
CDS-3UTR GCA 90 bp CCAGTATGTAATTGGGGTAGAAAAACCATATACTGTACTGGCAAGAATACAAAAGTTTCTTCTGTGAAATaGCTGCTAGTGTTTGGGGTC +
Preference number: 4 (lower is better)
Translates to: PVCNWGRKTIYCTGKNTKVSSVK*LLVFGV
Trigger: GACCCCAAACACTAGCAGGCATTTCACAGAAGAAAC...TTTTGTATTCTTGCCAGTACAGTATATGGTTTTTCTACCCCAATTACATACTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000369151.8
CDS-3UTR CCA 90 bp ACTGCCATCTGTTTAACAAAACGCACTCTTCTAAGAGAATACCCAGTCTTAGTGTTAAAAGTTGATCTATaGCACCATCCAATTTTGGCC +
Preference number: 4 (lower is better)
Translates to: TAICLTKRTLLREYPVLVLKVDL*HHPILA
Trigger: GGCCAAAATTGGATGGTGCCATAGATCAACTTTTAA...CACTAAGACTGGGTATTCTCTTAGAAGAGTGCGTTTTGTTAAACAGATGGCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369151.8
CDS-3UTR CCA 90 bp AGTCTGATGTTGCCTAGTAGAGAAGCCTATGCTCAATTAAGATTCAAGCAAAATAGGAGTTTGACAACATaGTCACACAGTTGCAAAGTG +
Preference number: 4 (lower is better)
Translates to: SLMLPSREAYAQLRFKQNRSLTT*SHSCKV
Trigger: CACTTTGCAACTGTGTGACCATGTTGTCAAACTCCT...ATTTTGCTTGAATCTTAATTGAGCATAGGCTTCTCTACTAGGCAACATCAGACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369151.8
ENST00000493518.5
CDS-3UTR CCA 90 bp CCAGTATGTAATTGGGGTAGAAAAACCATATACTGTACTGGCAAGAATACAAAACCAGGACATGTAGACTaGGAGACTATGTACAACCTT +
Preference number: 4 (lower is better)
Translates to: PVCNWGRKTIYCTGKNTKPGHVD*ETMYNL
Trigger: AAGGTTGTACATAGTCTCCCAGTCTACATGTCCTGG...TTTTGTATTCTTGCCAGTACAGTATATGGTTTTTCTACCCCAATTACATACTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369151.8
3UTR CAA 72 bp AAGTTATCCTTTTGTGCTGAAAAACGTTCAAATCCCTaGTTTGGTCAGTACAGAATATTGCGAGGTGATGCT +
Preference number: 4 (lower is better)
Translates to: KLSFCAEKRSNP*FGQYRILRGDA
Trigger: AGCATCACCTCGCAATATTCTGTACTGACCAAACAAGGGATTTGAACGTTTTTCAGCACAAAAGGATAACTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369151.8
3UTR CAA 72 bp GGCCCTTTGCTCTTCCATTTATATCGACGAATCAAATaGTCAGGTTCCACAGTGAAAATCATTGGGAATTTT +
Preference number: 4 (lower is better)
Translates to: GPLLFHLYRRIK*SGSTVKIIGNF
Trigger: AAAATTCCCAATGATTTTCACTGTGGAACCTGACAATTTGATTCGTCGATATAAATGGAAGAGCAAAGGGCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369151.8
3UTR CAA 72 bp AATCCATTCAGAAAGGTCTTGGATATCCTTGGCCCTTaGCTCTTCCATTTATATCGACGAATCAAATTGTCA +
Preference number: 4 (lower is better)
Translates to: NPFRKVLDILGP*LFHLYRRIKLS
Trigger: TGACAATTTGATTCGTCGATATAAATGGAAGAGCAAAGGGCCAAGGATATCCAAGACCTTTCTGAATGGATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369151.8
CDS-3UTR TCA 90 bp AGTCTGATGTTGCCTAGTAGAGAAGCCTATGCTCAATTAAGATTCAAGCAAAATCCTAAGTCCAAAAGTTaGTTAAAGGTCCACAGAAGA +
Preference number: 4 (lower is better)
Translates to: SLMLPSREAYAQLRFKQNPKSKS*LKVHRR
Trigger: TCTTCTGTGGACCTTTAATCAACTTTTGGACTTAGG...ATTTTGCTTGAATCTTAATTGAGCATAGGCTTCTCTACTAGGCAACATCAGACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369151.8
CDS-3UTR GCA 90 bp AATCAAGGACTTCAATTATTGGGTGACTTACTTGCTCCCAATATCCCACTTCTACAGCTGCAGTCACTGTaGAAAAATTTAGAGAAACTA +
Preference number: 4 (lower is better)
Translates to: NQGLQLLGDLLAPNIPLLQLQSL*KNLEKL
Trigger: TAGTTTCTCTAAATTTTTGCACAGTGACTGCAGCTG...TAGAAGTGGGATATTGGGAGCAAGTAAGTCACCCAATAATTGAAGTCCTTGATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369151.8
CDS-3UTR GCA 90 bp AATCAAGGACTTCAATTATTGGGTGACTTACTTGCTCCCAATATCCCACTTCTAATAATGCACAATGCATaGATCTGGGTTTGTGTTTCT +
Preference number: 4 (lower is better)
Translates to: NQGLQLLGDLLAPNIPLLIMHNA*IWVCVS
Trigger: AGAAACACAAACCCAGATGCATGCATTGTGCATTAT...TAGAAGTGGGATATTGGGAGCAAGTAAGTCACCCAATAATTGAAGTCCTTGATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369151.8
CDS-3UTR GCA 90 bp AATCAAGGACTTCAATTATTGGGTGACTTACTTGCTCCCAATATCCCACTTCTACCATCTTCATCACACTaGTGTAAAATTCTGAGAAAC +
Preference number: 4 (lower is better)
Translates to: NQGLQLLGDLLAPNIPLLPSSSH*CKILRN
Trigger: GTTTCTCAGAATTTTACAGCAGTGTGATGAAGATGG...TAGAAGTGGGATATTGGGAGCAAGTAAGTCACCCAATAATTGAAGTCCTTGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493518.5
CDS-3UTR GCA 90 bp AGTCTGATGTTGCCTAGTAGAGAAGCCTATGCTCAATTAAGATTCAAGCAAAATTTTTCATTGCTGATTTaGATTCAGGTGCTCTTTAGC +
Preference number: 4 (lower is better)
Translates to: SLMLPSREAYAQLRFKQNFSLLI*IQVLFS
Trigger: GCTAAAGAGCACCTGAATGCAAATCAGCAATGAAAA...ATTTTGCTTGAATCTTAATTGAGCATAGGCTTCTCTACTAGGCAACATCAGACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369151.8
3UTR CAA 72 bp CTTGTATTCCTGAGACCAATCCATTTTGGTCATCATTaGTTACATTTTGAATACACTGTTAGACTTGGTTTG +
Preference number: 4 (lower is better)
Translates to: LVFLRPIHFGHH*LHFEYTVRLGL
Trigger: CAAACCAAGTCTAACAGTGTATTCAAAATGTAACAAATGATGACCAAAATGGATTGGTCTCAGGAATACAAG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369151.8
CDS-3UTR CCA 90 bp CCAGTATGTAATTGGGGTAGAAAAACCATATACTGTACTGGCAAGAATACAAAAAACCCAGTATGTAATTaGGGTAGAAAAACCATATAC +
Preference number: 4 (lower is better)
Translates to: PVCNWGRKTIYCTGKNTKNPVCN*GRKTIY
Trigger: GTATATGGTTTTTCTACCCCAATTACATACTGGGTT...TTTTGTATTCTTGCCAGTACAGTATATGGTTTTTCTACCCCAATTACATACTGG
34% GC, longest homopolymer 6 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000369151.8
CDS GCA 90 bp CCTCCATCCTGCTGGCCCCCGGCACCCGCCCGCCTCACAGGCACCTaGCGCCTGTCTCAACCCCGGGCCAGCGGGCACCGCTGCCTCCCC +
Preference number: 5 (lower is better)
Translates to: PPSCWPPAPARLTGT*RLSQPRASGHRCLP
Trigger: GGGGAGGCAGCGGTGCCCGCTGGCCCGGGGTTGAGACAGGCGGCAGGTGCCTGTGAGGCGGGCGGGTGCCGGGGGCCAGCAGGATGGAGG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369151.8
ENST00000493518.5
CDS GCA 90 bp ACAGGCACCTGCCGCCTGTCTCAACCCCGGGCCAGCGGGCACCGCTaGCTCCCCGAGTTACATCGCCGGCGGCAGGAATGGGCGCAGCGG +
Preference number: 5 (lower is better)
Translates to: TGTCRLSQPRASGHR*LPELHRRRQEWAQR
Trigger: CCGCTGCGCCCATTCCTGCCGCCGGCGATGTAACTCGGGGAGGCAGCGGTGCCCGCTGGCCCGGGGTTGAGACAGGCGGCAGGTGCCTGT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369151.8
ENST00000493518.5
CDS CCA 90 bp AGCGGGCACCGCTGCCTCCCCGAGTTACATCGCCGGCGGCAGGAATaGGCGCAGCGGAGAGGGCTGCGGTGCGCAGGGTCTCTCGCTCTC +
Preference number: 5 (lower is better)
Translates to: SGHRCLPELHRRRQE*AQRRGLRCAGSLAL
Trigger: GAGAGCGAGAGACCCTGCGCACCGCAGCCCTCTCCGCTGCGCCCATTCCTGCCGCCGGCGATGTAACTCGGGGAGGCAGCGGTGCCCGCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369151.8
ENST00000493518.5
CDS GCA 90 bp CCGAGTTACATCGCCGGCGGCAGGAATGGGCGCAGCGGAGAGGGCTaGGGTGCGCAGGGTCTCTCGCTCTCCGCGGGGCCGACTAGCTTG +
Preference number: 5 (lower is better)
Translates to: PSYIAGGRNGRSGEG*GAQGLSLSAGPTSL
Trigger: CAAGCTAGTCGGCCCCGCGGAGAGCGAGAGACCCTGCGCACCGCAGCCCTCTCCGCTGCGCCCATTCCTGCCGCCGGCGATGTAACTCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369151.8
ENST00000493518.5
CDS CCA 90 bp ACGACGTTTTACAGCGGCTTCCAACAGGCAGTTGGAAAGGGCAGCTaGGGGCGCGGCCAGGAGGGCACGTGGTGCGAGGGACTGGCCGCG +
Preference number: 5 (lower is better)
Translates to: TTFYSGFQQAVGKGS*GRGQEGTWCEGLAA
Trigger: CGCGGCCAGTCCCTCGCACCACGTGCCCTCCTGGCCGCGCCCCCAGCTGCCCTTTCCAACTGCCTGTTGGAAGCCGCTGTAAAACGTCGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493518.5
CDS TCA 90 bp CACTCGGACCGTCAGCAGGATTTACAGCCCCTCGGGCTATTAGATTaGAGGCCTCAGTTCCTTGGTAGCTGTTGGCTGGATGCCACCCTC +
Preference number: 5 (lower is better)
Translates to: HSDRQQDLQPLGLLD*RPQFLGSCWLDATL
Trigger: GAGGGTGGCATCCAGCCAACAGCTACCAAGGAACTGAGGCCTTCAATCTAATAGCCCGAGGGGCTGTAAATCCTGCTGACGGTCCGAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544392.5
CDS-3UTR CAA 90 bp CTCTCAATAATACTAAGGGAAGCTTCCGTGCTAAAGTACCGCCCATCCCTAAACGCGGGGCCGACTAGCTaGAAGACGCGGCTGACGGCG +
Preference number: 5 (lower is better)
Translates to: LSIILREASVLKYRPSLNAGPTS*KTRLTA
Trigger: CGCCGTCAGCCGCGTCTTCAAGCTAGTCGGCCCCGC...GTTTAGGGATGGGCGGTACTTTAGCACGGAAGCTTCCCTTAGTATTATTGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369151.8
ENST00000493518.5
CDS-3UTR CAA 90 bp TTCAATACATTCACTATCTGTACCCCCTGGAACTTGCACATGCTGACGAGCTATGCGGGGCCGACTAGCTaGAAGACGCGGCTGACGGCG +
Preference number: 5 (lower is better)
Translates to: FNTFTICTPWNLHMLTSYAGPTS*KTRLTA
Trigger: CGCCGTCAGCCGCGTCTTCAAGCTAGTCGGCCCCGC...ATAGCTCGTCAGCATGTGCAAGTTCCAGGGGGTACAGATAGTGAATGTATTGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493518.5
CDS-3UTR CAA 90 bp ACAGGGCCACACCTGCCATCTTGGTGGGTGAGTTTAGATACCATACACTTCTCCACCGCAGCCTCCCAGTaGTTGTGGTTCTGGTCGTCC +
Preference number: 5 (lower is better)
Translates to: TGPHLPSWWVSLDTIHFSTAASQ*LWFWSS
Trigger: GGACGACCAGAACCACAACAACTGGGAGGCTGCGGT...GGAGAAGTGTATGGTATCTAAACTCACCCACCAAGATGGCAGGTGTGGCCCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369151.8
ENST00000493518.5
CDS-3UTR CAA 90 bp CTGCAGAGCAGACATGCGACAGCATCCCTGGGATGTTTCTTTTCCCCTCAAGTTGCAGCCTCCCAGTTGTaGTGGTTCTGGTCGTCCATC +
Preference number: 5 (lower is better)
Translates to: LQSRHATASLGCFFSPQVAASQL*WFWSSI
Trigger: GATGGACGACCAGAACCACAACAACTGGGAGGCTGC...AACTTGAGGGGAAAAGAAACATCCCAGGGATGCTGTCGCATGTCTGCTCTGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369151.8
ENST00000493518.5
CDS-3UTR CAA 90 bp ATGCTGACGAGCTATTATAAGCCAACTCATCCCCAGCTCTCTTCCGGGACTGGTGCAGCCTCCCAGTTGTaGTGGTTCTGGTCGTCCATC +
Preference number: 5 (lower is better)
Translates to: MLTSYYKPTHPQLSSGTGAASQL*WFWSSI
Trigger: GATGGACGACCAGAACCACAACAACTGGGAGGCTGC...ACCAGTCCCGGAAGAGAGCTGGGGATGAGTTGGCTTATAATAGCTCGTCAGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493518.5
CDS-3UTR CAA 90 bp GGTTCAAGGTGGGTCAAGGTGGGTCTTGGCCAGTGGAGGAAGGAAGGTGTCCAGGGTCAGTACAGAATATaGCGAGGTGATGCTCATGCA +
Preference number: 5 (lower is better)
Translates to: GSRWVKVGLGQWRKEGVQGQYRI*RGDAHA
Trigger: TGCATGAGCATCACCTCGCAATATTCTGTACTGACC...CTGGACACCTTCCTTCCTCCACTGGCCAAGACCCACCTTGACCCACCTTGAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369151.8
CDS-3UTR CAA 90 bp GGTTCAAGGTGGGTCAAGGTGGGTCTTGGCCAGTGGAGGAAGGAAGGTGTCCAGAGGAACAAGACTTCATaGCTTCATCCTTGCTCTGGC +
Preference number: 5 (lower is better)
Translates to: GSRWVKVGLGQWRKEGVQRNKTS*LHPCSG
Trigger: GCCAGAGCAAGGATGAAGCAATGAAGTCTTGTTCCT...CTGGACACCTTCCTTCCTCCACTGGCCAAGACCCACCTTGACCCACCTTGAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369151.8
CDS-3UTR CAA 90 bp CCTGCAGAGCAGACATGCGACAGCATCCCTGGGATGTTTCTTTTCCCCTCAAGTTGTACCCCCTGGAACTaGCACATGCTGACGAGCTAT +
Preference number: 5 (lower is better)
Translates to: PAEQTCDSIPGMFLFPSSCTPWN*HMLTSY
Trigger: ATAGCTCGTCAGCATGTGCAAGTTCCAGGGGGTACA...ACTTGAGGGGAAAAGAAACATCCCAGGGATGCTGTCGCATGTCTGCTCTGCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369151.8
ENST00000493518.5
CDS-3UTR CAA 90 bp GAGCAGACATGCGACAGCATCCCTGGGATGTTTCTTTTCCCCTCAAGTTCTCTGTGTACCCCCTGGAACTaGCACATGCTGACGAGCTAT +
Preference number: 5 (lower is better)
Translates to: EQTCDSIPGMFLFPSSSLCTPWN*HMLTSY
Trigger: ATAGCTCGTCAGCATGTGCAAGTTCCAGGGGGTACA...CAGAGAACTTGAGGGGAAAAGAAACATCCCAGGGATGCTGTCGCATGTCTGCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369151.8
ENST00000493518.5
CDS-3UTR CAA 90 bp ACAGGGCCACACCTGCCATCTTGGTGGGTGAGTTTAGATACCATACACTTCTCCGCCACACCTGCCATCTaGGTGGGTGAGTTTAGATAC +
Preference number: 5 (lower is better)
Translates to: TGPHLPSWWVSLDTIHFSATPAI*VGEFRY
Trigger: GTATCTAAACTCACCCACCAAGATGGCAGGTGTGGC...GGAGAAGTGTATGGTATCTAAACTCACCCACCAAGATGGCAGGTGTGGCCCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369151.8
ENST00000493518.5
CDS-3UTR CAA 90 bp CGTGCTAAAGTACCGCCCATCCCTAAACTAGAGTACTGCCAATACTATAGCAGCCCTGGGTTCAAGTTCTaGTGCCTGAGCCACCCAAGC +
Preference number: 5 (lower is better)
Translates to: RAKVPPIPKLEYCQYYSSPGFKF*CLSHPS
Trigger: GCTTGGGTGGCTCAGGCACAAGAACTTGAACCCAGG...GCTGCTATAGTATTGGCAGTACTCTAGTTTAGGGATGGGCGGTACTTTAGCACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369151.8
CDS TCA 90 bp TGGCTGGATGCCACCCTCAGTTCCTTGCCCAGTGGCCCTGTCAAGTaGAAGCAAGTAAGAAGTCCAACATCCTCTTCCATGAACAGCTTT +
Preference number: 5 (lower is better)
Translates to: WLDATLSSLPSGPVK*KQVRSPTSSSMNSF
Trigger: AAAGCTGTTCATGGAAGAGGATGTTGGACTTCTTACTTGCTTTCACTTGACAGGGCCACTGGGCAAGGAACTGAGGGTGGCATCCAGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544392.5
CDS TCA 90 bp CACAGCTTAGCTGAATTCTCTGTCTCAGGCTTTGCCGCTAGGCTGTaGTCAAGGTGTCAGCCAGGGCCACAGTCATCTCAAGATTCAACT +
Preference number: 5 (lower is better)
Translates to: HSLAEFSVSGFAARL*SRCQPGPQSSQDST
Trigger: AGTTGAATCTTGAGATGACTGTGGCCCTGGCTGACACCTTGATCACAGCCTAGCGGCAAAGCCTGAGACAGAGAATTCAGCTAAGCTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544392.5
CDS-3UTR CAA 90 bp GGAATTTATGTGTGCAAATCTGCAACCCGACAGCATGGCACGCAGCCAGGGAGTGAAGCAAATCAGCCATaGACTAACCAGACAACCAGC +
Preference number: 5 (lower is better)
Translates to: GIYVCKSATRQHGTQPGSEANQP*TNQTTS
Trigger: GCTGGTTGTCTGGTTAGTCAATGGCTGATTTGCTTC...ACTCCCTGGCTGCGTGCCATGCTGTCGGGTTGCAGATTTGCACACATAAATTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369151.8
CDS-3UTR CAA 90 bp AAGAACCTGCAGAGCAGACATGCGACAGCATCCCTGGGATGTTTCTTTTCCCCTTTCTCCAGGAGGAGTTaGACAACATGGTCACACAGT +
Preference number: 5 (lower is better)
Translates to: KNLQSRHATASLGCFFSPFSRRS*TTWSHS
Trigger: ACTGTGTGACCATGTTGTCAAACTCCTCCTGGAGAA...AGGGGAAAAGAAACATCCCAGGGATGCTGTCGCATGTCTGCTCTGCAGGTTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369151.8
ENST00000493518.5
CDS-3UTR CAA 90 bp GGAATTTATGTGTGCAAATCTGCAACCCGACAGCATGGCACGCAGCCAGGGAGTTGCATGCATCTGGGTTaGTGTTTCTTCTCACTAACC +
Preference number: 5 (lower is better)
Translates to: GIYVCKSATRQHGTQPGSCMHLG*CFFSLT
Trigger: GGTTAGTGAGAAGAAACACAAACCCAGATGCATGCA...ACTCCCTGGCTGCGTGCCATGCTGTCGGGTTGCAGATTTGCACACATAAATTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369151.8
CDS-3UTR CAA 90 bp GGTTCAAGGTGGGTCAAGGTGGGTCTTGGCCAGTGGAGGAAGGAAGGTGTCCAGAAACGTTCAAATCCCTaGTTTGGTCAGTACAGAATA +
Preference number: 5 (lower is better)
Translates to: GSRWVKVGLGQWRKEGVQKRSNP*FGQYRI
Trigger: TATTCTGTACTGACCAAACAAGGGATTTGAACGTTT...CTGGACACCTTCCTTCCTCCACTGGCCAAGACCCACCTTGACCCACCTTGAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369151.8
CDS-3UTR CAA 90 bp CTCTCAATAATACTAAGGGAAGCTTCCGTGCTAAAGTACCGCCCATCCCTAAACAGTGGCAAAAGCCTCTaGCTCGTGCTTGCCCTCCAA +
Preference number: 5 (lower is better)
Translates to: LSIILREASVLKYRPSLNSGKSL*LVLALQ
Trigger: TTGGAGGGCAAGCACGAGCAAGAGGCTTTTGCCACT...GTTTAGGGATGGGCGGTACTTTAGCACGGAAGCTTCCCTTAGTATTATTGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369151.8
CDS-3UTR CAA 90 bp ACAGGGCCACACCTGCCATCTTGGTGGGTGAGTTTAGATACCATACACTTCTCCCCATTCAGAAAGGTCTaGGATATCCTTGGCCCTTTG +
Preference number: 5 (lower is better)
Translates to: TGPHLPSWWVSLDTIHFSPFRKV*DILGPL
Trigger: CAAAGGGCCAAGGATATCCAAGACCTTTCTGAATGG...GGAGAAGTGTATGGTATCTAAACTCACCCACCAAGATGGCAGGTGTGGCCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369151.8
CDS-3UTR CAA 90 bp GAGCAGACATGCGACAGCATCCCTGGGATGTTTCTTTTCCCCTCAAGTTCTCTGTGGCACCATCCAATTTaGGCCAGTATGTGCTCTTAT +
Preference number: 5 (lower is better)
Translates to: EQTCDSIPGMFLFPSSSLWHHPI*ASMCSY
Trigger: ATAAGAGCACATACTGGCCAAAATTGGATGGTGCCA...CAGAGAACTTGAGGGGAAAAGAAACATCCCAGGGATGCTGTCGCATGTCTGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369151.8
ENST00000493518.5
CDS-3UTR CAA 90 bp CTGCAGAGCAGACATGCGACAGCATCCCTGGGATGTTTCTTTTCCCCTCAAGTTAATGCTCTAGGAGAGTaGGTCCCCAACATTAATATG +
Preference number: 5 (lower is better)
Translates to: LQSRHATASLGCFFSPQVNALGE*VPNINM
Trigger: CATATTAATGTTGGGGACCAACTCTCCTAGAGCATT...AACTTGAGGGGAAAAGAAACATCCCAGGGATGCTGTCGCATGTCTGCTCTGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369151.8
ENST00000493518.5
CDS-3UTR CAA 90 bp GAGCAGACATGCGACAGCATCCCTGGGATGTTTCTTTTCCCCTCAAGTTCTCTGTGCTCACAGAGTGAATaGAGTCCAATTAAAGTCCAC +
Preference number: 5 (lower is better)
Translates to: EQTCDSIPGMFLFPSSSLCSQSE*SPIKVH
Trigger: GTGGACTTTAATTGGACTCAATTCACTCTGTGAGCA...CAGAGAACTTGAGGGGAAAAGAAACATCCCAGGGATGCTGTCGCATGTCTGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369151.8
CDS-3UTR CAA 90 bp AATCAAGGACTTCAATTATTGGGTGACTTACTTGCTCCCAATATCCCACTTCTAGGGTCAAGGTGGGTCTaGGCCAGTGGAGGAAGGAAG +
Preference number: 5 (lower is better)
Translates to: NQGLQLLGDLLAPNIPLLGSRWV*ASGGRK
Trigger: CTTCCTTCCTCCACTGGCCAAGACCCACCTTGACCC...TAGAAGTGGGATATTGGGAGCAAGTAAGTCACCCAATAATTGAAGTCCTTGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369151.8
CDS-3UTR CAA 90 bp CATACACTTCTCCAGGAGGAGTTTGACAACATGGTCACACAGTTGCAAAGTGCAATGCTAGATGGGCATTaGGCTCCCTCCTTCATTCCT +
Preference number: 5 (lower is better)
Translates to: HTLLQEEFDNMVTQLQSAMLDGH*APSFIP
Trigger: AGGAATGAAGGAGGGAGCCAAATGCCCATCTAGCAT...TGCACTTTGCAACTGTGTGACCATGTTGTCAAACTCCTCCTGGAGAAGTGTATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369151.8
CDS-3UTR CAA 90 bp ACAAACCAAGTAAGAAGTCCAACATCCTCTTCCATGAACAGCTTTGTGACAGAGGCCACACCTGCCATCTaGGTGGGTGAGTTTAGATAC +
Preference number: 5 (lower is better)
Translates to: TNQVRSPTSSSMNSFVTEATPAI*VGEFRY
Trigger: GTATCTAAACTCACCCACCAAGATGGCAGGTGTGGC...CTCTGTCACAAAGCTGTTCATGGAAGAGGATGTTGGACTTCTTACTTGGTTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369151.8
ENST00000493518.5
CDS-3UTR CAA 90 bp AGGAGTTTGACAACATGGTCACACAGTTGCAAAGTGCACAAAGCTCAAGGCACAAACAGAAATATAGCTTaGCCACAGCTGGAAGGGAGC +
Preference number: 5 (lower is better)
Translates to: RSLTTWSHSCKVHKAQGTNRNIA*PQLEGS
Trigger: GCTCCCTTCCAGCTGTGGCAAAGCTATATTTCTGTT...TGTGCCTTGAGCTTTGTGCACTTTGCAACTGTGTGACCATGTTGTCAAACTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369151.8
ENST00000493518.5
CDS-3UTR CAA 90 bp CATACACTTCTCCAGGAGGAGTTTGACAACATGGTCACACAGTTGCAAAGTGCAGCCTCTTGCTCGTGCTaGCCCTCCAAATTTTTCATA +
Preference number: 5 (lower is better)
Translates to: HTLLQEEFDNMVTQLQSAASCSC*PSKFFI
Trigger: TATGAAAAATTTGGAGGGCAAGCACGAGCAAGAGGC...TGCACTTTGCAACTGTGTGACCATGTTGTCAAACTCCTCCTGGAGAAGTGTATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369151.8
CDS-3UTR CAA 90 bp GGAATTTATGTGTGCAAATCTGCAACCCGACAGCATGGCACGCAGCCAGGGAGTTTCAACAACACACTTTaGCAAAATTGGTGGATGGAA +
Preference number: 5 (lower is better)
Translates to: GIYVCKSATRQHGTQPGSFNNTL*QNWWME
Trigger: TTCCATCCACCAATTTTGCAAAAGTGTGTTGTTGAA...ACTCCCTGGCTGCGTGCCATGCTGTCGGGTTGCAGATTTGCACACATAAATTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369151.8
CDS-3UTR CAA 90 bp CTCTCAATAATACTAAGGGAAGCTTCCGTGCTAAAGTACCGCCCATCCCTAAACTGGCACCATCCAATTTaGGCCAGTATGTGCTCTTAT +
Preference number: 5 (lower is better)
Translates to: LSIILREASVLKYRPSLNWHHPI*ASMCSY
Trigger: ATAAGAGCACATACTGGCCAAAATTGGATGGTGCCA...GTTTAGGGATGGGCGGTACTTTAGCACGGAAGCTTCCCTTAGTATTATTGAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369151.8
ENST00000493518.5
CDS-3UTR CAA 90 bp ACAGGGCCACACCTGCCATCTTGGTGGGTGAGTTTAGATACCATACACTTCTCCCACACCACTGTGTATTaGGACTTAATAACTGTATCT +
Preference number: 5 (lower is better)
Translates to: TGPHLPSWWVSLDTIHFSHTTVY*DLITVS
Trigger: AGATACAGTTATTAAGTCCAAATACACAGTGGTGTG...GGAGAAGTGTATGGTATCTAAACTCACCCACCAAGATGGCAGGTGTGGCCCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369151.8
ENST00000493518.5
CDS-3UTR CAA 90 bp AAGAACCTGCAGAGCAGACATGCGACAGCATCCCTGGGATGTTTCTTTTCCCCTCACACCACTGTGTATTaGGACTTAATAACTGTATCT +
Preference number: 5 (lower is better)
Translates to: KNLQSRHATASLGCFFSPHTTVY*DLITVS
Trigger: AGATACAGTTATTAAGTCCAAATACACAGTGGTGTG...AGGGGAAAAGAAACATCCCAGGGATGCTGTCGCATGTCTGCTCTGCAGGTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369151.8
ENST00000493518.5
CDS-3UTR CAA 90 bp GGTGAGTTTAGATACCATACACTTCTCCAGGAGGAGTTTGACAACATGGTCACAAACAGAAATATAGCTTaGCCACAGCTGGAAGGGAGC +
Preference number: 5 (lower is better)
Translates to: GEFRYHTLLQEEFDNMVTNRNIA*PQLEGS
Trigger: GCTCCCTTCCAGCTGTGGCAAAGCTATATTTCTGTT...TGTGACCATGTTGTCAAACTCCTCCTGGAGAAGTGTATGGTATCTAAACTCACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369151.8
ENST00000493518.5
CDS-3UTR CAA 90 bp CATACACTTCTCCAGGAGGAGTTTGACAACATGGTCACACAGTTGCAAAGTGCATATTGGGTGACTTACTaGCTCCCAATATCCCACTTC +
Preference number: 5 (lower is better)
Translates to: HTLLQEEFDNMVTQLQSAYWVTY*LPISHF
Trigger: GAAGTGGGATATTGGGAGCAAGTAAGTCACCCAATA...TGCACTTTGCAACTGTGTGACCATGTTGTCAAACTCCTCCTGGAGAAGTGTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369151.8
ENST00000493518.5
CDS-3UTR CAA 90 bp CTCTCAATAATACTAAGGGAAGCTTCCGTGCTAAAGTACCGCCCATCCCTAAACTATTGGGTGACTTACTaGCTCCCAATATCCCACTTC +
Preference number: 5 (lower is better)
Translates to: LSIILREASVLKYRPSLNYWVTY*LPISHF
Trigger: GAAGTGGGATATTGGGAGCAAGTAAGTCACCCAATA...GTTTAGGGATGGGCGGTACTTTAGCACGGAAGCTTCCCTTAGTATTATTGAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369151.8
ENST00000493518.5
CDS-3UTR CAA 90 bp CTGCAGAGCAGACATGCGACAGCATCCCTGGGATGTTTCTTTTCCCCTCAAGTTCTAGAAAGTTTTGAATaGTTATGCCCTTCTGGCTTA +
Preference number: 5 (lower is better)
Translates to: LQSRHATASLGCFFSPQVLESFE*LCPSGL
Trigger: TAAGCCAGAAGGGCATAACAATTCAAAACTTTCTAG...AACTTGAGGGGAAAAGAAACATCCCAGGGATGCTGTCGCATGTCTGCTCTGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369151.8
CDS-3UTR CAA 90 bp AAGAACCTGCAGAGCAGACATGCGACAGCATCCCTGGGATGTTTCTTTTCCCCTATAATTTCTGCCAAGTaGTCAGCAAGGAAATGGTAT +
Preference number: 5 (lower is better)
Translates to: KNLQSRHATASLGCFFSPIISAK*SARKWY
Trigger: ATACCATTTCCTTGCTGACAACTTGGCAGAAATTAT...AGGGGAAAAGAAACATCCCAGGGATGCTGTCGCATGTCTGCTCTGCAGGTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369151.8
CDS-3UTR CAA 90 bp ACAAACCAAGTAAGAAGTCCAACATCCTCTTCCATGAACAGCTTTGTGACAGAGTTCTCCAGGAGGAGTTaGACAACATGGTCACACAGT +
Preference number: 5 (lower is better)
Translates to: TNQVRSPTSSSMNSFVTEFSRRS*TTWSHS
Trigger: ACTGTGTGACCATGTTGTCAAACTCCTCCTGGAGAA...CTCTGTCACAAAGCTGTTCATGGAAGAGGATGTTGGACTTCTTACTTGGTTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369151.8
ENST00000493518.5
CDS-3UTR CAA 90 bp AGGAGTTTGACAACATGGTCACACAGTTGCAAAGTGCACAAAGCTCAAGGCACAAATGCTCTAGGAGAGTaGGTCCCCAACATTAATATG +
Preference number: 5 (lower is better)
Translates to: RSLTTWSHSCKVHKAQGTNALGE*VPNINM
Trigger: CATATTAATGTTGGGGACCAACTCTCCTAGAGCATT...TGTGCCTTGAGCTTTGTGCACTTTGCAACTGTGTGACCATGTTGTCAAACTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369151.8
ENST00000493518.5
CDS-3UTR CAA 90 bp ACAAACCAAGTAAGAAGTCCAACATCCTCTTCCATGAACAGCTTTGTGACAGAGTCCTTTCTCATATTCTaGTGGCCAGAAACTGGGGTG +
Preference number: 5 (lower is better)
Translates to: TNQVRSPTSSSMNSFVTESFLIF*WPETGV
Trigger: CACCCCAGTTTCTGGCCACAAGAATATGAGAAAGGA...CTCTGTCACAAAGCTGTTCATGGAAGAGGATGTTGGACTTCTTACTTGGTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369151.8
CDS-3UTR CAA 90 bp GCACAAAGCTCAAGGCACAGAGTAGAAGAAAGTTGTGAACTGATGGGGGAAAGTCCTGAGTTGTTTTCATaGCTGATTTGCATTCAGGTG +
Preference number: 5 (lower is better)
Translates to: AQSSRHRVEESCELMGESPELFS*LICIQV
Trigger: CACCTGAATGCAAATCAGCAATGAAAACAACTCAGG...ACTTTCCCCCATCAGTTCACAACTTTCTTCTACTCTGTGCCTTGAGCTTTGTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369151.8
CDS-3UTR CAA 90 bp GGTGAGTTTAGATACCATACACTTCTCCAGGAGGAGTTTGACAACATGGTCACATCCGTCTCTCCTGAGTaGTTTTCATTGCTGATTTGC +
Preference number: 5 (lower is better)
Translates to: GEFRYHTLLQEEFDNMVTSVSPE*FSLLIC
Trigger: GCAAATCAGCAATGAAAACAACTCAGGAGAGACGGA...TGTGACCATGTTGTCAAACTCCTCCTGGAGAAGTGTATGGTATCTAAACTCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369151.8
CDS TCA 90 bp AGATCTGGAGGGCTGGCCTGCAGCTCCTTTGAGACTCTCTCTAAGTaGTTAGTTATCTTTTTAATCAGATCACTATACATCTGTTCCGAG +
Preference number: 5 (lower is better)
Translates to: RSGGLACSSFETLSK*LVIFLIRSLYICSE
Trigger: CTCGGAACAGATGTATAGTGATCTGATTAAAAAGATAACTAATCACTTAGAGAGAGTCTCAAAGGAGCTGCAGGCCAGCCCTCCAGATCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369151.8
ENST00000493518.5
CDS GCA 90 bp CAAATCCAAGTACCATTAAGCCTCACAAAACACATACAGAACCACTaGCCTCTTGGAAAAGGCTGTAACAAACAGTTCCAATCCCAACAG +
Preference number: 5 (lower is better)
Translates to: QIQVPLSLTKHIQNH*PLGKGCNKQFQSQQ
Trigger: CTGTTGGGATTGGAACTGTTTGTTACAGCCTTTTCCAAGAGGGCAGTGGTTCTGTATGTGTTTTGTGAGGCTTAATGGTACTTGGATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481360.1
CDS-3UTR CAA 90 bp TTCAATACATTCACTATCTGTACCCCCTGGAACTTGCACATGCTGACGAGCTATACATTCATTAAGAACTaGGAGGTGGAGGTGTTGATG +
Preference number: 5 (lower is better)
Translates to: FNTFTICTPWNLHMLTSYTFIKN*EVEVLM
Trigger: CATCAACACCTCCACCTCCAAGTTCTTAATGAATGT...ATAGCTCGTCAGCATGTGCAAGTTCCAGGGGGTACAGATAGTGAATGTATTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493518.5
CDS-3UTR CAA 90 bp GGTGAGTTTAGATACCATACACTTCTCCAGGAGGAGTTTGACAACATGGTCACAGATATCCTTGGCCCTTaGCTCTTCCATTTATATCGA +
Preference number: 5 (lower is better)
Translates to: GEFRYHTLLQEEFDNMVTDILGP*LFHLYR
Trigger: TCGATATAAATGGAAGAGCAAAGGGCCAAGGATATC...TGTGACCATGTTGTCAAACTCCTCCTGGAGAAGTGTATGGTATCTAAACTCACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369151.8
CDS TCA 90 bp GTATACAGGCCTTTCACAATATTTGCCATAGTTGAAGGTGTGACCTaGAATGGTGTTGACTGGGCTTCTAAAAGTAAAGGCATTAGGCTG +
Preference number: 5 (lower is better)
Translates to: VYRPFTIFAIVEGVT*NGVDWASKSKGIRL
Trigger: CAGCCTAATGCCTTTACTTTTAGAAGCCCAGTCAACACCATTTCAGGTCACACCTTCAACTATGGCAAATATTGTGAAAGGCCTGTATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369151.8
ENST00000481360.1
ENST00000493518.5
ENST00000544392.5
CDS TCA 90 bp CCTCTTGGAAAAGGCTGTAACAAACAGTTCCAATCCCAACAGAAATaGGAAATGTTTACCTGGTCTGAGGGTATACAGGCCTTTCACAAT +
Preference number: 5 (lower is better)
Translates to: PLGKGCNKQFQSQQK*EMFTWSEGIQAFHN
Trigger: ATTGTGAAAGGCCTGTATACCCTCAGACCAGGTAAACATTTCTCATTTCTGTTGGGATTGGAACTGTTTGTTACAGCCTTTTCCAAGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481360.1
CDS-3UTR CAA 90 bp GGTGAGTTTAGATACCATACACTTCTCCAGGAGGAGTTTGACAACATGGTCACAACTATTAGTCTGATGTaGCCTAGTAGAGAAGCCTAT +
Preference number: 5 (lower is better)
Translates to: GEFRYHTLLQEEFDNMVTTISLM*PSREAY
Trigger: ATAGGCTTCTCTACTAGGCAACATCAGACTAATAGT...TGTGACCATGTTGTCAAACTCCTCCTGGAGAAGTGTATGGTATCTAAACTCACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369151.8
ENST00000493518.5
CDS-3UTR CAA 90 bp ACTGCCATCTGTTTAACAAAACGCACTCTTCTAAGAGAATACCCAGTCTTAGTGAGATCACCATTACCTTaGCTAGTATGCGTACAGACC +
Preference number: 5 (lower is better)
Translates to: TAICLTKRTLLREYPVLVRSPLP*LVCVQT
Trigger: GGTCTGTACGCATACTAGCAAAGGTAATGGTGATCT...CACTAAGACTGGGTATTCTCTTAGAAGAGTGCGTTTTGTTAAACAGATGGCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369151.8
CDS-3UTR CAA 90 bp GCTCCAGTGTGTCCTCTTTTCAGGAAGGAAAGCATATTCAATACATTCACTATCACTATTAGTCTGATGTaGCCTAGTAGAGAAGCCTAT +
Preference number: 5 (lower is better)
Translates to: APVCPLFRKESIFNTFTITISLM*PSREAY
Trigger: ATAGGCTTCTCTACTAGGCAACATCAGACTAATAGT...GATAGTGAATGTATTGAATATGCTTTCCTTCCTGAAAAGAGGACACACTGGAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493518.5
CDS-3UTR CAA 90 bp AATCAAGGACTTCAATTATTGGGTGACTTACTTGCTCCCAATATCCCACTTCTAACTGAGAGGGGTATGTaGAAAATGCCCATTATGTTG +
Preference number: 5 (lower is better)
Translates to: NQGLQLLGDLLAPNIPLLTERGM*KMPIML
Trigger: CAACATAATGGGCATTTTCAACATACCCCTCTCAGT...TAGAAGTGGGATATTGGGAGCAAGTAAGTCACCCAATAATTGAAGTCCTTGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369151.8
CDS-3UTR CAA 90 bp CCAGTATGTAATTGGGGTAGAAAAACCATATACTGTACTGGCAAGAATACAAAAACATTCATTAAGAACTaGGAGGTGGAGGTGTTGATG +
Preference number: 5 (lower is better)
Translates to: PVCNWGRKTIYCTGKNTKTFIKN*EVEVLM
Trigger: CATCAACACCTCCACCTCCAAGTTCTTAATGAATGT...TTTTGTATTCTTGCCAGTACAGTATATGGTTTTTCTACCCCAATTACATACTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000369151.8
CDS TCA 90 bp TACAATCAGTTCTTTACCTGCAGCTCCTTTGAGACTCTCTCTAAGTaGTTAGTTATCTTTTTAATCAGATCACTATACATCTGTTCCGAG +
Preference number: 5 (lower is better)
Translates to: YNQFFTCSSFETLSK*LVIFLIRSLYICSE
Trigger: CTCGGAACAGATGTATAGTGATCTGATTAAAAAGATAACTAATCACTTAGAGAGAGTCTCAAAGGAGCTGCAGGTAAAGAACTGATTGTA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477583.1
CDS GCA 72 bp TGCTGGCCCCCGGCACCCGCCCGCCTCACAGGCACCTaGCGCCTGTCTCAACCCCGGGCCAGCGGGCACCGC +
Preference number: 6 (lower is better)
Translates to: CWPPAPARLTGT*RLSQPRASGHR
Trigger: GCGGTGCCCGCTGGCCCGGGGTTGAGACAGGCGGCAGGTGCCTGTGAGGCGGGCGGGTGCCGGGGGCCAGCA
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369151.8
ENST00000493518.5
CDS GCA 72 bp ATCGCCGGCGGCAGGAATGGGCGCAGCGGAGAGGGCTaGGGTGCGCAGGGTCTCTCGCTCTCCGCGGGGCCG +
Preference number: 6 (lower is better)
Translates to: IAGGRNGRSGEG*GAQGLSLSAGP
Trigger: CGGCCCCGCGGAGAGCGAGAGACCCTGCGCACCGCAGCCCTCTCCGCTGCGCCCATTCCTGCCGCCGGCGAT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369151.8
ENST00000493518.5
CDS CAA 72 bp GCGCAGGGTCTCTCGCTCTCCGCGGGGCCGACTAGCTaGAAGACGCGGCTGACGGCGGTGGGCGCTCCGGGG +
Preference number: 6 (lower is better)
Translates to: AQGLSLSAGPTS*KTRLTAVGAPG
Trigger: CCCCGGAGCGCCCACCGCCGTCAGCCGCGTCTTCAAGCTAGTCGGCCCCGCGGAGAGCGAGAGACCCTGCGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369151.8
ENST00000493518.5
CDS CCA 72 bp CCCACGCAACAGGGCAGAGGTTCGCCCCGCCTCGGCTaGCAGGGAGCTAACAGGGGAGGCGCGACGGGTCGG +
Preference number: 6 (lower is better)
Translates to: PTQQGRGSPRLG*QGANRGGATGR
Trigger: CCGACCCGTCGCGCCTCCCCTGTTAGCTCCCTGCCAGCCGAGGCGGGGCGAACCTCTGCCCTGTTGCGTGGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493518.5
CDS GCA 72 bp TGCCGCCTGTCTCAACCCCGGGCCAGCGGGCACCGCTaGCTCCCCGAGTTACATCGCCGGCGGCAGGAATGG +
Preference number: 6 (lower is better)
Translates to: CRLSQPRASGHR*LPELHRRRQEW
Trigger: CCATTCCTGCCGCCGGCGATGTAACTCGGGGAGGCAGCGGTGCCCGCTGGCCCGGGGTTGAGACAGGCGGCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369151.8
ENST00000493518.5
CDS CCA 72 bp GGAAAGGGCAGCTGGGGGCGCGGCCAGGAGGGCACGTaGTGCGAGGGACTGGCCGCGAGAAAGCGGAGCCAA +
Preference number: 6 (lower is better)
Translates to: GKGSWGRGQEGT*CEGLAARKRSQ
Trigger: TTGGCTCCGCTTTCTCGCGGCCAGTCCCTCGCACCACGTGCCCTCCTGGCCGCGCCCCCAGCTGCCCTTTCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493518.5
CDS GCA 72 bp AAGGGCAGCTGGGGGCGCGGCCAGGAGGGCACGTGGTaGGAGGGACTGGCCGCGAGAAAGCGGAGCCAAAAG +
Preference number: 6 (lower is better)
Translates to: KGSWGRGQEGTW*EGLAARKRSQK
Trigger: CTTTTGGCTCCGCTTTCTCGCGGCCAGTCCCTCGCACCACGTGCCCTCCTGGCCGCGCCCCCAGCTGCCCTT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493518.5
CDS CCA 72 bp TACAGCGGCTTCCAACAGGCAGTTGGAAAGGGCAGCTaGGGGCGCGGCCAGGAGGGCACGTGGTGCGAGGGA +
Preference number: 6 (lower is better)
Translates to: YSGFQQAVGKGS*GRGQEGTWCEG
Trigger: TCCCTCGCACCACGTGCCCTCCTGGCCGCGCCCCCAGCTGCCCTTTCCAACTGCCTGTTGGAAGCCGCTGTA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493518.5
CDS TCA 72 bp GCCGCGAGAAAGCGGAGCCAAAAGGGGCGGGAGCTGTaGGTCACTCCCACGCAACAGGGCAGAGGTTCGCCC +
Preference number: 6 (lower is better)
Translates to: AARKRSQKGREL*VTPTQQGRGSP
Trigger: GGGCGAACCTCTGCCCTGTTGCGTGGGAGTGACTCACAGCTCCCGCCCCTTTTGGCTCCGCTTTCTCGCGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493518.5
CDS TCA 72 bp GCTGAATTCTCTGTCTCAGGCTTTGCCGCTAGGCTGTaGTCAAGGTGTCAGCCAGGGCCACAGTCATCTCAA +
Preference number: 6 (lower is better)
Translates to: AEFSVSGFAARL*SRCQPGPQSSQ
Trigger: TTGAGATGACTGTGGCCCTGGCTGACACCTTGATCACAGCCTAGCGGCAAAGCCTGAGACAGAGAATTCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544392.5
CDS CCA 72 bp CTGTTGGCTGGATGCCACCCTCAGTTCCTTGCCCAGTaGCCCTGTCAAGTGAAAGCAAGTAAGAAGTCCAAC +
Preference number: 6 (lower is better)
Translates to: LLAGCHPQFLAQ*PCQVKASKKSN
Trigger: GTTGGACTTCTTACTTGCTTTCACTTGACAGGGCCACTGGGCAAGGAACTGAGGGTGGCATCCAGCCAACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544392.5
CDS TCA 72 bp CGTCAGCAGGATTTACAGCCCCTCGGGCTATTAGATTaGAGGCCTCAGTTCCTTGGTAGCTGTTGGCTGGAT +
Preference number: 6 (lower is better)
Translates to: RQQDLQPLGLLD*RPQFLGSCWLD
Trigger: ATCCAGCCAACAGCTACCAAGGAACTGAGGCCTTCAATCTAATAGCCCGAGGGGCTGTAAATCCTGCTGACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544392.5
CDS GCA 72 bp GTACCATTAAGCCTCACAAAACACATACAGAACCACTaGCCTCTTGGAAAAGGCTGTAACAAACAGTTCCAA +
Preference number: 6 (lower is better)
Translates to: VPLSLTKHIQNH*PLGKGCNKQFQ
Trigger: TTGGAACTGTTTGTTACAGCCTTTTCCAAGAGGGCAGTGGTTCTGTATGTGTTTTGTGAGGCTTAATGGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481360.1
CDS TCA 72 bp GGGCTGGCCTGCAGCTCCTTTGAGACTCTCTCTAAGTaGTTAGTTATCTTTTTAATCAGATCACTATACATC +
Preference number: 6 (lower is better)
Translates to: GLACSSFETLSK*LVIFLIRSLYI
Trigger: GATGTATAGTGATCTGATTAAAAAGATAACTAATCACTTAGAGAGAGTCTCAAAGGAGCTGCAGGCCAGCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369151.8
ENST00000493518.5
CDS TCA 72 bp CCTTTCACAATATTTGCCATAGTTGAAGGTGTGACCTaGAATGGTGTTGACTGGGCTTCTAAAAGTAAAGGC +
Preference number: 6 (lower is better)
Translates to: PFTIFAIVEGVT*NGVDWASKSKG
Trigger: GCCTTTACTTTTAGAAGCCCAGTCAACACCATTTCAGGTCACACCTTCAACTATGGCAAATATTGTGAAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369151.8
ENST00000481360.1
ENST00000493518.5
ENST00000544392.5
CDS GCA 72 bp AACCCACTACTATTTCAGGAGCCATCTTCATCACACTaGTGTAAAATTCTGAGAAACTGGTCTGAGGGTATA +
Preference number: 6 (lower is better)
Translates to: NPLLFQEPSSSH*CKILRNWSEGI
Trigger: TATACCCTCAGACCAGTTTCTCAGAATTTTACAGCAGTGTGATGAAGATGGCTCCTGAAATAGTAGTGGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493518.5
CDS CCA 72 bp TATAGTCACCAGGACTCTGAGTTAAAAGTTGATCTATaGCACCATCCAATTTTGGCCAGTATGTGCTCTTAT +
Preference number: 6 (lower is better)
Translates to: YSHQDSELKVDL*HHPILASMCSY
Trigger: ATAAGAGCACATACTGGCCAAAATTGGATGGTGCCATAGATCAACTTTTAACTCAGAGTCCTGGTGACTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369151.8
ENST00000477583.1
ENST00000493518.5
CDS CAA 90 bp CATATATATGAAAAGAGGCACAATGCTCTGCAATGCTCCCATATATaGTCCAAGAGCTATATTAAATCTTTCAATATAGAGATCTGGAGG +
Preference number: 6 (lower is better)
Translates to: HIYEKRHNALQCSHI*SKSYIKSFNIEIWR
Trigger: CCTCCAGATCTCTATATTGAAAGATTTAATATAGCTCTTGGACAATATATGGGAGCATTGCAGAGCATTGTGCCTCTTTTCATATATATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369151.8
ENST00000493518.5
ENST00000544392.5
CDS GCA 72 bp TTTTTAATCAGATCACTATACATCTGTTCCGAGTGCTaGTGGCATACACATTTATACACACAACTGTATATC +
Preference number: 6 (lower is better)
Translates to: FLIRSLYICSEC*WHTHLYTQLYI
Trigger: GATATACAGTTGTGTGTATAAATGTGTATGCCAGCAGCACTCGGAACAGATGTATAGTGATCTGATTAAAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369151.8
ENST00000477583.1
ENST00000493518.5
CDS CAA 72 bp GAAAAGAGGCACAATGCTCTGCAATGCTCCCATATATaGTCCAAGAGCTATATTAAATCTTTCAATATAGAG +
Preference number: 6 (lower is better)
Translates to: EKRHNALQCSHI*SKSYIKSFNIE
Trigger: CTCTATATTGAAAGATTTAATATAGCTCTTGGACAATATATGGGAGCATTGCAGAGCATTGTGCCTCTTTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369151.8
ENST00000493518.5
ENST00000544392.5
CDS TCA 72 bp TTCTTTACCTGCAGCTCCTTTGAGACTCTCTCTAAGTaGTTAGTTATCTTTTTAATCAGATCACTATACATC +
Preference number: 6 (lower is better)
Translates to: FFTCSSFETLSK*LVIFLIRSLYI
Trigger: GATGTATAGTGATCTGATTAAAAAGATAACTAATCACTTAGAGAGAGTCTCAAAGGAGCTGCAGGTAAAGAA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477583.1
CDS CCA 72 bp ATTTATACACACAACTGTATATCTGTTCATAGGATATaGGGATATAGTCACCAGGACTCTGAGTTAAAAGTT +
Preference number: 6 (lower is better)
Translates to: IYTHNCISVHRI*GYSHQDSELKV
Trigger: AACTTTTAACTCAGAGTCCTGGTGACTATATCCCCATATCCTATGAACAGATATACAGTTGTGTGTATAAAT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369151.8
ENST00000477583.1
ENST00000493518.5