RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CACNG6 (Homo sapiens)

Ensembl gene IDs: ENSG00000130433

Ensembl transcript IDs: ENST00000252729.7, ENST00000346968.2, ENST00000352529.1

Found 169 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GCCAGACCCTTCGCTATCTCCCCCAACCGCACCCGGAGCTGCAGATaGGTTGTAAAAAGTCTCTCCCGGCAAGTGAATCGATCCAGACCT +
Preference number: 1 (lower is better)
Translates to: ARPFAISPNRTRSCR*VVKSLSRQVNRSRP
Trigger: AGGTCTGGATCGATTCACTTGCCGGGAGAGACTTTTTACAACTCATCTGCAGCTCCGGGTGCGGTTGGGGGAGATAGCGAAGGGTCTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000252729.7
ENST00000352529.1
3UTR-3UTR TCA 90 bp ACAGCGAGGCCAGACCCTTCGCTATCTCCCCCAACCGCACCCGGAGCTGCAGATGTCTCTCCCGGCAAGTaGATCGATCCAGACCTGGGA +
Preference number: 2 (lower is better)
Translates to: TARPDPSLSPPTAPGAADVSPGK*IDPDLG
Trigger: TCCCAGGTCTGGATCGATTCACTTGCCGGGAGAGAC...ATCTGCAGCTCCGGGTGCGGTTGGGGGAGATAGCGAAGGGTCTGGCCTCGCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252729.7
ENST00000352529.1
3UTR-3UTR CCA 90 bp ACAGCGAGGCCAGACCCTTCGCTATCTCCCCCAACCGCACCCGGAGCTGCAGATCCCGCCAGTCTTCTCTaGGGACCCTCGTTTGCAAAG +
Preference number: 2 (lower is better)
Translates to: TARPDPSLSPPTAPGAADPASLL*GPSFAK
Trigger: CTTTGCAAACGAGGGTCCCCAGAGAAGACTGGCGGG...ATCTGCAGCTCCGGGTGCGGTTGGGGGAGATAGCGAAGGGTCTGGCCTCGCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252729.7
ENST00000352529.1
3UTR-3UTR GCA 90 bp CAGGTCCCCGCCAGTCTTCTCTGGGGACCCTCGTTTGCAAAGAGCCTCTTCCCAAAAGGGCTCGGTGGTTaGTTAGAGAAGTCTCACGCG +
Preference number: 2 (lower is better)
Translates to: QVPASLLWGPSFAKSLFPKGLGG*LEKSHA
Trigger: CGCGTGAGACTTCTCTAAGCAACCACCGAGCCCTTT...TGGGAAGAGGCTCTTTGCAAACGAGGGTCCCCAGAGAAGACTGGCGGGGACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000252729.7
ENST00000352529.1
3UTR-3UTR CCA 90 bp CATCAGGTCCCCGCCAGTCTTCTCTGGGGACCCTCGTTTGCAAAGAGCCTCTTCGGTCAAAGGGCTCGGTaGTTGCTTAGAGAAGTCTCA +
Preference number: 2 (lower is better)
Translates to: HQVPASLLWGPSFAKSLFGQRAR*LLREVS
Trigger: TGAGACTTCTCTAAGCAACCACCGAGCCCTTTGACC...GAAGAGGCTCTTTGCAAACGAGGGTCCCCAGAGAAGACTGGCGGGGACCTGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252729.7
ENST00000352529.1
3UTR-3UTR CCA 90 bp CATCAGGTCCCCGCCAGTCTTCTCTGGGGACCCTCGTTTGCAAAGAGCCTCTTCAGTTTCTCTAGGAGATaGGGCAAAAAGATCTTGGGG +
Preference number: 2 (lower is better)
Translates to: HQVPASLLWGPSFAKSLFSFSRR*GKKILG
Trigger: CCCCAAGATCTTTTTGCCCCATCTCCTAGAGAAACT...GAAGAGGCTCTTTGCAAACGAGGGTCCCCAGAGAAGACTGGCGGGGACCTGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000252729.7
ENST00000352529.1
3UTR-3UTR GCA 90 bp TCCCACCCCCAAGCAACCCACATACAGCCACAGAGAAAAACGTATTTACAGAGGAAAGGGCTCGGTGGTTaGTTAGAGAAGTCTCACGCG +
Preference number: 2 (lower is better)
Translates to: SHPQATHIQPQRKTYLQRKGLGG*LEKSHA
Trigger: CGCGTGAGACTTCTCTAAGCAACCACCGAGCCCTTT...CCTCTGTAAATACGTTTTTCTCTGTGGCTGTATGTGGGTTGCTTGGGGGTGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000252729.7
ENST00000352529.1
3UTR-3UTR CCA 90 bp CTCTTCCCATCCCACCCCCAAGCAACCCACATACAGCCACAGAGAAAAACGTATGGTCAAAGGGCTCGGTaGTTGCTTAGAGAAGTCTCA +
Preference number: 2 (lower is better)
Translates to: LFPSHPQATHIQPQRKTYGQRAR*LLREVS
Trigger: TGAGACTTCTCTAAGCAACCACCGAGCCCTTTGACC...ATACGTTTTTCTCTGTGGCTGTATGTGGGTTGCTTGGGGGTGGGATGGGAAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000252729.7
ENST00000352529.1
3UTR-3UTR CCA 90 bp CTGCAGATGAGTTGTAAAAAGTCTCTCCCGGCAAGTGAATCGATCCAGACCTGGATCTTGGGGGTACAATaGAGAAGGTCAAAGGGCTCG +
Preference number: 2 (lower is better)
Translates to: LQMSCKKSLPASESIQTWILGVQ*RRSKGS
Trigger: CGAGCCCTTTGACCTTCTCCATTGTACCCCCAAGAT...CCAGGTCTGGATCGATTCACTTGCCGGGAGAGACTTTTTACAACTCATCTGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000252729.7
ENST00000352529.1
3UTR-3UTR CCA 90 bp TTCCCATCCCACCCCCAAGCAACCCACATACAGCCACAGAGAAAAACGTATTTAATCTTGGGGGTACAATaGAGAAGGTCAAAGGGCTCG +
Preference number: 2 (lower is better)
Translates to: FPSHPQATHIQPQRKTYLILGVQ*RRSKGS
Trigger: CGAGCCCTTTGACCTTCTCCATTGTACCCCCAAGAT...TAAATACGTTTTTCTCTGTGGCTGTATGTGGGTTGCTTGGGGGTGGGATGGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000252729.7
ENST00000352529.1
3UTR-3UTR CAA 90 bp CAGGTCCCCGCCAGTCTTCTCTGGGGACCCTCGTTTGCAAAGAGCCTCTTCCCACAAAGGGCTCGGTGGTaGCTTAGAGAAGTCTCACGC +
Preference number: 3 (lower is better)
Translates to: QVPASLLWGPSFAKSLFPQRARW*LREVSR
Trigger: GCGTGAGACTTCTCTAAGCAACCACCGAGCCCTTTG...TGGGAAGAGGCTCTTTGCAAACGAGGGTCCCCAGAGAAGACTGGCGGGGACCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252729.7
ENST00000352529.1
3UTR TCA 72 bp TTCGCTATCTCCCCCAACCGCACCCGGAGCTGCAGATaGGTTGTAAAAAGTCTCTCCCGGCAAGTGAATCGA +
Preference number: 3 (lower is better)
Translates to: FAISPNRTRSCR*VVKSLSRQVNR
Trigger: TCGATTCACTTGCCGGGAGAGACTTTTTACAACTCATCTGCAGCTCCGGGTGCGGTTGGGGGAGATAGCGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000252729.7
ENST00000352529.1
3UTR-3UTR CAA 90 bp CTCTTCCCATCCCACCCCCAAGCAACCCACATACAGCCACAGAGAAAAACGTATCAAAGGGCTCGGTGGTaGCTTAGAGAAGTCTCACGC +
Preference number: 3 (lower is better)
Translates to: LFPSHPQATHIQPQRKTYQRARW*LREVSR
Trigger: GCGTGAGACTTCTCTAAGCAACCACCGAGCCCTTTG...ATACGTTTTTCTCTGTGGCTGTATGTGGGTTGCTTGGGGGTGGGATGGGAAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000252729.7
ENST00000352529.1
CDS-3UTR TCA 90 bp ACAGCGAGGCCAGACCCTTCGCTATCTCCCCCAACCGCACCCGGAGCTGCAGATGGGGAGGCTCCGGGCTaGCTCTCTGCAGCAGGGCCC +
Preference number: 4 (lower is better)
Translates to: TARPDPSLSPPTAPGAADGEAPG*LSAAGP
Trigger: GGGCCCTGCTGCAGAGAGTCAGCCCGGAGCCTCCCC...ATCTGCAGCTCCGGGTGCGGTTGGGGGAGATAGCGAAGGGTCTGGCCTCGCTGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252729.7
ENST00000352529.1
CDS-3UTR TCA 90 bp CGAGGCCAGACCCTTCGCTATCTCCCCCAACCGCACCCGGAGCTGCAGATGAGTAGGAGTACTCGTAGGTaGGGCGTGGGGCCGGGGGAG +
Preference number: 4 (lower is better)
Translates to: RGQTLRYLPQPHPELQMSRSTRR*GVGPGE
Trigger: CTCCCCCGGCCCCACGCCTCACCTACGAGTACTCCT...ACTCATCTGCAGCTCCGGGTGCGGTTGGGGGAGATAGCGAAGGGTCTGGCCTCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000252729.7
ENST00000352529.1
CDS-3UTR GCA 90 bp CGAGGCCAGACCCTTCGCTATCTCCCCCAACCGCACCCGGAGCTGCAGATGAGTCCACCCAGAACTCGGTaGCCACGGACAGCACCGCCA +
Preference number: 4 (lower is better)
Translates to: RGQTLRYLPQPHPELQMSPPRTR*PRTAPP
Trigger: TGGCGGTGCTGTCCGTGGGCACCGAGTTCTGGGTGG...ACTCATCTGCAGCTCCGGGTGCGGTTGGGGGAGATAGCGAAGGGTCTGGCCTCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252729.7
ENST00000352529.1
CDS-3UTR CCA 90 bp CATCAGGTCCCCGCCAGTCTTCTCTGGGGACCCTCGTTTGCAAAGAGCCTCTTCACAGCACCGCCAGCGTaGCGCCCACGGCGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: HQVPASLLWGPSFAKSLFTAPPA*RPRRPA
Trigger: TGCTGGCCGCCGTGGGCGCCACGCTGGCGGTGCTGT...GAAGAGGCTCTTTGCAAACGAGGGTCCCCAGAGAAGACTGGCGGGGACCTGATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252729.7
ENST00000352529.1
CDS-3UTR TCA 90 bp CAGGTCCCCGCCAGTCTTCTCTGGGGACCCTCGTTTGCAAAGAGCCTCTTCCCAAGGAGTACTCGTAGGTaGGGCGTGGGGCCGGGGGAG +
Preference number: 4 (lower is better)
Translates to: QVPASLLWGPSFAKSLFPRSTRR*GVGPGE
Trigger: CTCCCCCGGCCCCACGCCTCACCTACGAGTACTCCT...TGGGAAGAGGCTCTTTGCAAACGAGGGTCCCCAGAGAAGACTGGCGGGGACCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000252729.7
ENST00000352529.1
CDS-3UTR GCA 90 bp CAGGTCCCCGCCAGTCTTCTCTGGGGACCCTCGTTTGCAAAGAGCCTCTTCCCAGCCACAGCCGCTTGGTaGACGCCTTCCACAGCCCCA +
Preference number: 4 (lower is better)
Translates to: QVPASLLWGPSFAKSLFPATAAW*TPSTAP
Trigger: TGGGGCTGTGGAAGGCGTGCACCAAGCGGCTGTGGC...TGGGAAGAGGCTCTTTGCAAACGAGGGTCCCCAGAGAAGACTGGCGGGGACCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000252729.7
ENST00000352529.1
CDS-3UTR CCA 90 bp ACAGCGAGGCCAGACCCTTCGCTATCTCCCCCAACCGCACCCGGAGCTGCAGATGGCTGGGGAAGCCTCTaGGGTTCAGAGGAGGGTCTA +
Preference number: 4 (lower is better)
Translates to: TARPDPSLSPPTAPGAADGWGSL*GSEEGL
Trigger: TAGACCCTCCTCTGAACCCCAGAGGCTTCCCCAGCC...ATCTGCAGCTCCGGGTGCGGTTGGGGGAGATAGCGAAGGGTCTGGCCTCGCTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252729.7
ENST00000352529.1
CDS-3UTR CCA 90 bp CGAGGCCAGACCCTTCGCTATCTCCCCCAACCGCACCCGGAGCTGCAGATGAGTTCATCTTATGGCCGGTaGGGTCGGGAAGGGGGAGGA +
Preference number: 4 (lower is better)
Translates to: RGQTLRYLPQPHPELQMSSSYGR*GREGGG
Trigger: TCCTCCCCCTTCCCGACCCCACCGGCCATAAGATGA...ACTCATCTGCAGCTCCGGGTGCGGTTGGGGGAGATAGCGAAGGGTCTGGCCTCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000252729.7
ENST00000352529.1
CDS-3UTR CCA 90 bp GCAAGTGAATCGATCCAGACCTGGGAAATGAAGGGGCCCCCAACTCCCACCCAAACGCGTGGCTCTAGGTaGCCCGGTGCCCCCGCTTGG +
Preference number: 4 (lower is better)
Translates to: ASESIQTWEMKGPPTPTQTRGSR*PGAPAW
Trigger: CCAAGCGGGGGCACCGGGCCACCTAGAGCCACGCGT...TTGGGTGGGAGTTGGGGGCCCCTTCATTTCCCAGGTCTGGATCGATTCACTTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000252729.7
ENST00000352529.1
CDS-3UTR TCA 90 bp CGAGGCCAGACCCTTCGCTATCTCCCCCAACCGCACCCGGAGCTGCAGATGAGTTGGCCTTGTAGGTGTTaGGCTCCACCCAGAACTCGG +
Preference number: 4 (lower is better)
Translates to: RGQTLRYLPQPHPELQMSWPCRC*APPRTR
Trigger: CCGAGTTCTGGGTGGAGCTCAACACCTACAAGGCCA...ACTCATCTGCAGCTCCGGGTGCGGTTGGGGGAGATAGCGAAGGGTCTGGCCTCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252729.7
ENST00000352529.1
CDS-3UTR TCA 90 bp GCAAGTGAATCGATCCAGACCTGGGAAATGAAGGGGCCCCCAACTCCCACCCAAGGCACCCCAAGGCCATaGCTGCCAGGCCCAGCACTG +
Preference number: 4 (lower is better)
Translates to: ASESIQTWEMKGPPTPTQGTPRP*LPGPAL
Trigger: CAGTGCTGGGCCTGGCAGTCATGGCCTTGGGGTGCC...TTGGGTGGGAGTTGGGGGCCCCTTCATTTCCCAGGTCTGGATCGATTCACTTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000252729.7
CDS-3UTR TCA 90 bp CAGGTCCCCGCCAGTCTTCTCTGGGGACCCTCGTTTGCAAAGAGCCTCTTCCCACAAGAGCAGCAGGCCTaGGAGGCCAAAGCAGACGGC +
Preference number: 4 (lower is better)
Translates to: QVPASLLWGPSFAKSLFPQEQQA*EAKADG
Trigger: GCCGTCTGCTTTGGCCTCTCAGGCCTGCTGCTCTTG...TGGGAAGAGGCTCTTTGCAAACGAGGGTCCCCAGAGAAGACTGGCGGGGACCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000252729.7
CDS-3UTR GCA 90 bp CAGGTCCCCGCCAGTCTTCTCTGGGGACCCTCGTTTGCAAAGAGCCTCTTCCCAGGCTGTGGTCCGCACTaGGGCTCGGAAAACCAGGAC +
Preference number: 4 (lower is better)
Translates to: QVPASLLWGPSFAKSLFPGCGPH*GSENQD
Trigger: GTCCTGGTTTTCCGAGCCGCAGTGCGGACCACAGCC...TGGGAAGAGGCTCTTTGCAAACGAGGGTCCCCAGAGAAGACTGGCGGGGACCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000252729.7
CDS-3UTR GCA 90 bp CTCCCGGCAAGTGAATCGATCCAGACCTGGGAAATGAAGGGGCCCCCAACTCCCTCCGGGCTGACTCTCTaGAGCAGGGCCCTCACGGAA +
Preference number: 4 (lower is better)
Translates to: LPASESIQTWEMKGPPTPSGLTL*SRALTE
Trigger: TTCCGTGAGGGCCCTGCTGCAGAGAGTCAGCCCGGA...GGGAGTTGGGGGCCCCTTCATTTCCCAGGTCTGGATCGATTCACTTGCCGGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252729.7
ENST00000352529.1
CDS-3UTR GCA 90 bp CCAAATCAGATCACAGCGAGGCCAGACCCTTCGCTATCTCCCCCAACCGCACCCTCCGGGCTGACTCTCTaGAGCAGGGCCCTCACGGAA +
Preference number: 4 (lower is better)
Translates to: PNQITARPDPSLSPPTAPSGLTL*SRALTE
Trigger: TTCCGTGAGGGCCCTGCTGCAGAGAGTCAGCCCGGA...GGGTGCGGTTGGGGGAGATAGCGAAGGGTCTGGCCTCGCTGTGATCTGATTTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252729.7
ENST00000352529.1
CDS-3UTR CCA 90 bp CTCCCGGCAAGTGAATCGATCCAGACCTGGGAAATGAAGGGGCCCCCAACTCCCCTGGGGCTCACACTATaGGGCTGTGGTCCGCACTGC +
Preference number: 4 (lower is better)
Translates to: LPASESIQTWEMKGPPTPLGLTL*GCGPHC
Trigger: GCAGTGCGGACCACAGCCCCATAGTGTGAGCCCCAG...GGGAGTTGGGGGCCCCTTCATTTCCCAGGTCTGGATCGATTCACTTGCCGGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000252729.7
CDS-3UTR CCA 90 bp ACAGCGAGGCCAGACCCTTCGCTATCTCCCCCAACCGCACCCGGAGCTGCAGATTGTTTGGAGGAGATGTaGCCGGGGTTCCCTTGGGCT +
Preference number: 4 (lower is better)
Translates to: TARPDPSLSPPTAPGAADCLEEM*PGFPWA
Trigger: AGCCCAAGGGAACCCCGGCCACATCTCCTCCAAACA...ATCTGCAGCTCCGGGTGCGGTTGGGGGAGATAGCGAAGGGTCTGGCCTCGCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252729.7
ENST00000352529.1
CDS-3UTR CCA 90 bp ACAGCGAGGCCAGACCCTTCGCTATCTCCCCCAACCGCACCCGGAGCTGCAGATAATGATCCCCAGGGCTaGGGAAGCCTCTGGGGTTCA +
Preference number: 4 (lower is better)
Translates to: TARPDPSLSPPTAPGAADNDPQG*GSLWGS
Trigger: TGAACCCCAGAGGCTTCCCCAGCCCTGGGGATCATT...ATCTGCAGCTCCGGGTGCGGTTGGGGGAGATAGCGAAGGGTCTGGCCTCGCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000252729.7
ENST00000352529.1
CDS-3UTR CCA 90 bp AAAAAGTCTCTCCCGGCAAGTGAATCGATCCAGACCTGGGAAATGAAGGGGCCCACAGCACCGCCAGCGTaGCGCCCACGGCGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: KKSLPASESIQTWEMKGPTAPPA*RPRRPA
Trigger: TGCTGGCCGCCGTGGGCGCCACGCTGGCGGTGCTGT...GGGCCCCTTCATTTCCCAGGTCTGGATCGATTCACTTGCCGGGAGAGACTTTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252729.7
ENST00000352529.1
CDS-3UTR TCA 90 bp CAGGTCCCCGCCAGTCTTCTCTGGGGACCCTCGTTTGCAAAGAGCCTCTTCCCAATCCGAGGTCTCTACTaGGCCTGGAAAAGGGGCCGG +
Preference number: 4 (lower is better)
Translates to: QVPASLLWGPSFAKSLFPIRGLY*AWKRGR
Trigger: CCGGCCCCTTTTCCAGGCTCAGTAGAGACCTCGGAT...TGGGAAGAGGCTCTTTGCAAACGAGGGTCCCCAGAGAAGACTGGCGGGGACCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000252729.7
CDS-3UTR TCA 90 bp CTCCCGGCAAGTGAATCGATCCAGACCTGGGAAATGAAGGGGCCCCCAACTCCCTCCAGACCTGGGAAATaGAGGGGCCCCCAACTCCCA +
Preference number: 4 (lower is better)
Translates to: LPASESIQTWEMKGPPTPSRPGK*RGPQLP
Trigger: TGGGAGTTGGGGGCCCCTTCATTTCCCAGGTCTGGA...GGGAGTTGGGGGCCCCTTCATTTCCCAGGTCTGGATCGATTCACTTGCCGGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000252729.7
ENST00000352529.1
CDS-3UTR GCA 90 bp ACAGCGAGGCCAGACCCTTCGCTATCTCCCCCAACCGCACCCGGAGCTGCAGATAGGAATGAGAACTGGTaGCCGCTGAAGCTCCCTGCA +
Preference number: 4 (lower is better)
Translates to: TARPDPSLSPPTAPGAADRNENW*PLKLPA
Trigger: TGCAGGGAGCTTCAGCGGGCACCAGTTCTCATTCCT...ATCTGCAGCTCCGGGTGCGGTTGGGGGAGATAGCGAAGGGTCTGGCCTCGCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252729.7
ENST00000352529.1
CDS-3UTR GCA 90 bp CCAAATCAGATCACAGCGAGGCCAGACCCTTCGCTATCTCCCCCAACCGCACCCCTTCGCACACGGCGCTaGCGTTGGCCTTGTAGGTGT +
Preference number: 4 (lower is better)
Translates to: PNQITARPDPSLSPPTAPLRTRR*RWPCRC
Trigger: ACACCTACAAGGCCAACGGCAGCGCCGTGTGCGAAG...GGGTGCGGTTGGGGGAGATAGCGAAGGGTCTGGCCTCGCTGTGATCTGATTTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252729.7
ENST00000352529.1
CDS-3UTR CCA 90 bp ACAGCGAGGCCAGACCCTTCGCTATCTCCCCCAACCGCACCCGGAGCTGCAGATCTAGGGCTAAGAGTTTaGGGTACCCAGGAAGGGACC +
Preference number: 4 (lower is better)
Translates to: TARPDPSLSPPTAPGAADLGLRV*GTQEGT
Trigger: GGTCCCTTCCTGGGTACCCCAAACTCTTAGCCCTAG...ATCTGCAGCTCCGGGTGCGGTTGGGGGAGATAGCGAAGGGTCTGGCCTCGCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252729.7
ENST00000352529.1
CDS-3UTR CCA 90 bp ACAGCGAGGCCAGACCCTTCGCTATCTCCCCCAACCGCACCCGGAGCTGCAGATCAGAGGAATGAGAACTaGTGCCCGCTGAAGCTCCCT +
Preference number: 4 (lower is better)
Translates to: TARPDPSLSPPTAPGAADQRNEN*CPLKLP
Trigger: AGGGAGCTTCAGCGGGCACCAGTTCTCATTCCTCTG...ATCTGCAGCTCCGGGTGCGGTTGGGGGAGATAGCGAAGGGTCTGGCCTCGCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252729.7
ENST00000352529.1
CDS-3UTR CCA 90 bp GCAAGTGAATCGATCCAGACCTGGGAAATGAAGGGGCCCCCAACTCCCACCCAACCTGCCACAGCCGCTTaGTGCACGCCTTCCACAGCC +
Preference number: 4 (lower is better)
Translates to: ASESIQTWEMKGPPTPTQPATAA*CTPSTA
Trigger: GGCTGTGGAAGGCGTGCACCAAGCGGCTGTGGCAGG...TTGGGTGGGAGTTGGGGGCCCCTTCATTTCCCAGGTCTGGATCGATTCACTTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252729.7
ENST00000352529.1
CDS-3UTR CCA 90 bp CTCTTCCCATCCCACCCCCAAGCAACCCACATACAGCCACAGAGAAAAACGTATCCCGGTGCCCCCGCTTaGGACAGAGGGACCCCCAGG +
Preference number: 4 (lower is better)
Translates to: LFPSHPQATHIQPQRKTYPGAPA*DRGTPR
Trigger: CCTGGGGGTCCCTCTGTCCCAAGCGGGGGCACCGGG...ATACGTTTTTCTCTGTGGCTGTATGTGGGTTGCTTGGGGGTGGGATGGGAAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000252729.7
ENST00000352529.1
CDS-3UTR TCA 90 bp CTGCAGATGAGTTGTAAAAAGTCTCTCCCGGCAAGTGAATCGATCCAGACCTGGGGGGAGGCTCCGGGCTaGCTCTCTGCAGCAGGGCCC +
Preference number: 4 (lower is better)
Translates to: LQMSCKKSLPASESIQTWGEAPG*LSAAGP
Trigger: GGGCCCTGCTGCAGAGAGTCAGCCCGGAGCCTCCCC...CCAGGTCTGGATCGATTCACTTGCCGGGAGAGACTTTTTACAACTCATCTGCAG
60% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000252729.7
ENST00000352529.1
CDS-3UTR TCA 90 bp CCAAATCAGATCACAGCGAGGCCAGACCCTTCGCTATCTCCCCCAACCGCACCCGTCTCTCCCGGCAAGTaGATCGATCCAGACCTGGGA +
Preference number: 4 (lower is better)
Translates to: PNQITARPDPSLSPPTAPVSPGK*IDPDLG
Trigger: TCCCAGGTCTGGATCGATTCACTTGCCGGGAGAGAC...GGGTGCGGTTGGGGGAGATAGCGAAGGGTCTGGCCTCGCTGTGATCTGATTTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252729.7
ENST00000352529.1
CDS-3UTR GCA 90 bp AAAAAGTCTCTCCCGGCAAGTGAATCGATCCAGACCTGGGAAATGAAGGGGCCCACGGGCACGTCCGCCTaGCACAGCCGCTTGGTGCAC +
Preference number: 4 (lower is better)
Translates to: KKSLPASESIQTWEMKGPTGTSA*HSRLVH
Trigger: GTGCACCAAGCGGCTGTGGCAGGCGGACGTGCCCGT...GGGCCCCTTCATTTCCCAGGTCTGGATCGATTCACTTGCCGGGAGAGACTTTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252729.7
ENST00000352529.1
CDS-3UTR CCA 90 bp CTCCCGGCAAGTGAATCGATCCAGACCTGGGAAATGAAGGGGCCCCCAACTCCCGGTCCTGTGTGTGTTTaGAGGAGATGTGGCCGGGGT +
Preference number: 4 (lower is better)
Translates to: LPASESIQTWEMKGPPTPGPVCV*RRCGRG
Trigger: ACCCCGGCCACATCTCCTCCAAACACACACAGGACC...GGGAGTTGGGGGCCCCTTCATTTCCCAGGTCTGGATCGATTCACTTGCCGGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000252729.7
ENST00000352529.1
CDS-3UTR CCA 90 bp CATCAGGTCCCCGCCAGTCTTCTCTGGGGACCCTCGTTTGCAAAGAGCCTCTTCGGCTGGGGAAGCCTCTaGGGTTCAGAGGAGGGTCTA +
Preference number: 4 (lower is better)
Translates to: HQVPASLLWGPSFAKSLFGWGSL*GSEEGL
Trigger: TAGACCCTCCTCTGAACCCCAGAGGCTTCCCCAGCC...GAAGAGGCTCTTTGCAAACGAGGGTCCCCAGAGAAGACTGGCGGGGACCTGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000252729.7
ENST00000352529.1
CDS-3UTR CCA 90 bp CAGGTCCCCGCCAGTCTTCTCTGGGGACCCTCGTTTGCAAAGAGCCTCTTCCCAGACCACATCATCTTATaGCCGGTGGGGTCGGGAAGG +
Preference number: 4 (lower is better)
Translates to: QVPASLLWGPSFAKSLFPDHIIL*PVGSGR
Trigger: CCTTCCCGACCCCACCGGCCATAAGATGATGTGGTC...TGGGAAGAGGCTCTTTGCAAACGAGGGTCCCCAGAGAAGACTGGCGGGGACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000252729.7
ENST00000352529.1
CDS-3UTR CCA 90 bp TCCCACCCCCAAGCAACCCACATACAGCCACAGAGAAAAACGTATTTACAGAGGCTCGTAGGTGAGGCGTaGGGCCGGGGGAGGCTCCGG +
Preference number: 4 (lower is better)
Translates to: SHPQATHIQPQRKTYLQRLVGEA*GRGRLR
Trigger: CCGGAGCCTCCCCCGGCCCCACGCCTCACCTACGAG...CCTCTGTAAATACGTTTTTCTCTGTGGCTGTATGTGGGTTGCTTGGGGGTGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000252729.7
ENST00000352529.1
CDS-3UTR CCA 90 bp CTCCCGGCAAGTGAATCGATCCAGACCTGGGAAATGAAGGGGCCCCCAACTCCCCCCGCCAGTCTTCTCTaGGGACCCTCGTTTGCAAAG +
Preference number: 4 (lower is better)
Translates to: LPASESIQTWEMKGPPTPPASLL*GPSFAK
Trigger: CTTTGCAAACGAGGGTCCCCAGAGAAGACTGGCGGG...GGGAGTTGGGGGCCCCTTCATTTCCCAGGTCTGGATCGATTCACTTGCCGGGAG
60% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000252729.7
ENST00000352529.1
CDS-3UTR TCA 90 bp ACAGCGAGGCCAGACCCTTCGCTATCTCCCCCAACCGCACCCGGAGCTGCAGATACAAGGCCCCCACCCTaGGGTTTAGAGATAGAATTC +
Preference number: 4 (lower is better)
Translates to: TARPDPSLSPPTAPGAADTRPPP*GLEIEF
Trigger: GAATTCTATCTCTAAACCTCAGGGTGGGGGCCTTGT...ATCTGCAGCTCCGGGTGCGGTTGGGGGAGATAGCGAAGGGTCTGGCCTCGCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000252729.7
ENST00000352529.1
CDS-3UTR GCA 90 bp CAGGTCCCCGCCAGTCTTCTCTGGGGACCCTCGTTTGCAAAGAGCCTCTTCCCAAGGAATGAGAACTGGTaGCCGCTGAAGCTCCCTGCA +
Preference number: 4 (lower is better)
Translates to: QVPASLLWGPSFAKSLFPRNENW*PLKLPA
Trigger: TGCAGGGAGCTTCAGCGGGCACCAGTTCTCATTCCT...TGGGAAGAGGCTCTTTGCAAACGAGGGTCCCCAGAGAAGACTGGCGGGGACCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252729.7
ENST00000352529.1
CDS-3UTR GCA 90 bp ACAGCGAGGCCAGACCCTTCGCTATCTCCCCCAACCGCACCCGGAGCTGCAGATGAGGAGGGTCTAGGTTaGCCTCAAGAACTTGGCAAA +
Preference number: 4 (lower is better)
Translates to: TARPDPSLSPPTAPGAADEEGLG*PQELGK
Trigger: TTTGCCAAGTTCTTGAGGGCAACCTAGACCCTCCTC...ATCTGCAGCTCCGGGTGCGGTTGGGGGAGATAGCGAAGGGTCTGGCCTCGCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252729.7
ENST00000352529.1
CDS-3UTR GCA 90 bp AGAGCCTCTTCCCATCCCACCCCCAAGCAACCCACATACAGCCACAGAGAAAAAGCCACAGCCGCTTGGTaGACGCCTTCCACAGCCCCA +
Preference number: 4 (lower is better)
Translates to: RASSHPTPKQPTYSHREKATAAW*TPSTAP
Trigger: TGGGGCTGTGGAAGGCGTGCACCAAGCGGCTGTGGC...TTTTTCTCTGTGGCTGTATGTGGGTTGCTTGGGGGTGGGATGGGAAGAGGCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000252729.7
ENST00000352529.1
CDS-3UTR CCA 90 bp CTCTTCCCATCCCACCCCCAAGCAACCCACATACAGCCACAGAGAAAAACGTATGACCGGGGGCCCTCCTaGGGCTCACACTATGGGGCT +
Preference number: 4 (lower is better)
Translates to: LFPSHPQATHIQPQRKTYDRGPS*GSHYGA
Trigger: AGCCCCATAGTGTGAGCCCCAGGAGGGCCCCCGGTC...ATACGTTTTTCTCTGTGGCTGTATGTGGGTTGCTTGGGGGTGGGATGGGAAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000252729.7
CDS-3UTR CCA 90 bp TTCCCATCCCACCCCCAAGCAACCCACATACAGCCACAGAGAAAAACGTATTTAGAGGGCTGGGGCAGATaGGACCGGGGGCCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: FPSHPQATHIQPQRKTYLEGWGR*DRGPSW
Trigger: CCAGGAGGGCCCCCGGTCCCATCTGCCCCAGCCCTC...TAAATACGTTTTTCTCTGTGGCTGTATGTGGGTTGCTTGGGGGTGGGATGGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000252729.7
CDS-3UTR CCA 90 bp TTCCCATCCCACCCCCAAGCAACCCACATACAGCCACAGAGAAAAACGTATTTACTCGTAGGTGAGGCGTaGGGCCGGGGGAGGCTCCGG +
Preference number: 4 (lower is better)
Translates to: FPSHPQATHIQPQRKTYLLVGEA*GRGRLR
Trigger: CCGGAGCCTCCCCCGGCCCCACGCCTCACCTACGAG...TAAATACGTTTTTCTCTGTGGCTGTATGTGGGTTGCTTGGGGGTGGGATGGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000252729.7
ENST00000352529.1
CDS-3UTR CCA 90 bp ATCCCACCCCCAAGCAACCCACATACAGCCACAGAGAAAAACGTATTTACAGAGCCCGGTGCCCCCGCTTaGGACAGAGGGACCCCCAGG +
Preference number: 4 (lower is better)
Translates to: IPPPSNPHTATEKNVFTEPGAPA*DRGTPR
Trigger: CCTGGGGGTCCCTCTGTCCCAAGCGGGGGCACCGGG...CTCTGTAAATACGTTTTTCTCTGTGGCTGTATGTGGGTTGCTTGGGGGTGGGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000252729.7
ENST00000352529.1
CDS-3UTR CCA 90 bp TCCCACCCCCAAGCAACCCACATACAGCCACAGAGAAAAACGTATTTACAGAGGACGCGTGGCTCTAGGTaGCCCGGTGCCCCCGCTTGG +
Preference number: 4 (lower is better)
Translates to: SHPQATHIQPQRKTYLQRTRGSR*PGAPAW
Trigger: CCAAGCGGGGGCACCGGGCCACCTAGAGCCACGCGT...CCTCTGTAAATACGTTTTTCTCTGTGGCTGTATGTGGGTTGCTTGGGGGTGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000252729.7
ENST00000352529.1
CDS-3UTR CCA 90 bp ACAGCGAGGCCAGACCCTTCGCTATCTCCCCCAACCGCACCCGGAGCTGCAGATATCTTGGGGGTACAATaGAGAAGGTCAAAGGGCTCG +
Preference number: 4 (lower is better)
Translates to: TARPDPSLSPPTAPGAADILGVQ*RRSKGS
Trigger: CGAGCCCTTTGACCTTCTCCATTGTACCCCCAAGAT...ATCTGCAGCTCCGGGTGCGGTTGGGGGAGATAGCGAAGGGTCTGGCCTCGCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000252729.7
ENST00000352529.1
CDS-3UTR CCA 90 bp CTCCCGGCAAGTGAATCGATCCAGACCTGGGAAATGAAGGGGCCCCCAACTCCCGAATCGATCCAGACCTaGGAAATGAAGGGGCCCCCA +
Preference number: 4 (lower is better)
Translates to: LPASESIQTWEMKGPPTPESIQT*EMKGPP
Trigger: TGGGGGCCCCTTCATTTCCCAGGTCTGGATCGATTC...GGGAGTTGGGGGCCCCTTCATTTCCCAGGTCTGGATCGATTCACTTGCCGGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000252729.7
ENST00000352529.1
CDS-3UTR GCA 90 bp ATCCCACCCCCAAGCAACCCACATACAGCCACAGAGAAAAACGTATTTACAGAGACCCCAGCTCCGCGCTaGCTCCGAAGCGTCCGGCTG +
Preference number: 4 (lower is better)
Translates to: IPPPSNPHTATEKNVFTETPAPR*LRSVRL
Trigger: CAGCCGGACGCTTCGGAGGCAGCGCGGAGCTGGGGT...CTCTGTAAATACGTTTTTCTCTGTGGCTGTATGTGGGTTGCTTGGGGGTGGGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000252729.7
CDS-3UTR GCA 90 bp CTCTTCCCATCCCACCCCCAAGCAACCCACATACAGCCACAGAGAAAAACGTATCCACCCAGAACTCGGTaGCCACGGACAGCACCGCCA +
Preference number: 4 (lower is better)
Translates to: LFPSHPQATHIQPQRKTYPPRTR*PRTAPP
Trigger: TGGCGGTGCTGTCCGTGGGCACCGAGTTCTGGGTGG...ATACGTTTTTCTCTGTGGCTGTATGTGGGTTGCTTGGGGGTGGGATGGGAAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000252729.7
ENST00000352529.1
CDS-3UTR GCA 90 bp CTCCCGGCAAGTGAATCGATCCAGACCTGGGAAATGAAGGGGCCCCCAACTCCCAAAGGGCTCGGTGGTTaGTTAGAGAAGTCTCACGCG +
Preference number: 4 (lower is better)
Translates to: LPASESIQTWEMKGPPTPKGLGG*LEKSHA
Trigger: CGCGTGAGACTTCTCTAAGCAACCACCGAGCCCTTT...GGGAGTTGGGGGCCCCTTCATTTCCCAGGTCTGGATCGATTCACTTGCCGGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252729.7
ENST00000352529.1
CDS-3UTR CCA 90 bp CCAAATCAGATCACAGCGAGGCCAGACCCTTCGCTATCTCCCCCAACCGCACCCTTGCCCTCAAGAACTTaGCAAAGAAGACGGGGCCCA +
Preference number: 4 (lower is better)
Translates to: PNQITARPDPSLSPPTAPLPSRT*QRRRGP
Trigger: TGGGCCCCGTCTTCTTTGCCAAGTTCTTGAGGGCAA...GGGTGCGGTTGGGGGAGATAGCGAAGGGTCTGGCCTCGCTGTGATCTGATTTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252729.7
ENST00000352529.1
CDS-3UTR CCA 90 bp GCAAGTGAATCGATCCAGACCTGGGAAATGAAGGGGCCCCCAACTCCCACCCAAGACCACATCATCTTATaGCCGGTGGGGTCGGGAAGG +
Preference number: 4 (lower is better)
Translates to: ASESIQTWEMKGPPTPTQDHIIL*PVGSGR
Trigger: CCTTCCCGACCCCACCGGCCATAAGATGATGTGGTC...TTGGGTGGGAGTTGGGGGCCCCTTCATTTCCCAGGTCTGGATCGATTCACTTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000252729.7
ENST00000352529.1
CDS-3UTR GCA 90 bp CTCTTCCCATCCCACCCCCAAGCAACCCACATACAGCCACAGAGAAAAACGTATCCCGCTGAAGCTCCCTaGAGCTCCAAGGGGCTGCTT +
Preference number: 4 (lower is better)
Translates to: LFPSHPQATHIQPQRKTYPAEAP*SSKGLL
Trigger: AAGCAGCCCCTTGGAGCTGCAGGGAGCTTCAGCGGG...ATACGTTTTTCTCTGTGGCTGTATGTGGGTTGCTTGGGGGTGGGATGGGAAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000252729.7
ENST00000352529.1
CDS-3UTR GCA 90 bp CAGGTCCCCGCCAGTCTTCTCTGGGGACCCTCGTTTGCAAAGAGCCTCTTCCCAGAGGAGGGTCTAGGTTaGCCTCAAGAACTTGGCAAA +
Preference number: 4 (lower is better)
Translates to: QVPASLLWGPSFAKSLFPEEGLG*PQELGK
Trigger: TTTGCCAAGTTCTTGAGGGCAACCTAGACCCTCCTC...TGGGAAGAGGCTCTTTGCAAACGAGGGTCCCCAGAGAAGACTGGCGGGGACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252729.7
ENST00000352529.1
CDS-3UTR GCA 90 bp GCAAGTGAATCGATCCAGACCTGGGAAATGAAGGGGCCCCCAACTCCCACCCAACGCCGGTTCTCCTCTTaGAGGAAGAAGTTGGACCAC +
Preference number: 4 (lower is better)
Translates to: ASESIQTWEMKGPPTPTQRRFSS*RKKLDH
Trigger: GTGGTCCAACTTCTTCCTGCAAGAGGAGAACCGGCG...TTGGGTGGGAGTTGGGGGCCCCTTCATTTCCCAGGTCTGGATCGATTCACTTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252729.7
ENST00000352529.1
CDS-3UTR GCA 90 bp TTCCCATCCCACCCCCAAGCAACCCACATACAGCCACAGAGAAAAACGTATTTAACGGGCACGTCCGCCTaGCACAGCCGCTTGGTGCAC +
Preference number: 4 (lower is better)
Translates to: FPSHPQATHIQPQRKTYLTGTSA*HSRLVH
Trigger: GTGCACCAAGCGGCTGTGGCAGGCGGACGTGCCCGT...TAAATACGTTTTTCTCTGTGGCTGTATGTGGGTTGCTTGGGGGTGGGATGGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000252729.7
ENST00000352529.1
CDS-3UTR GCA 90 bp CTCTTCCCATCCCACCCCCAAGCAACCCACATACAGCCACAGAGAAAAACGTATAGGGCCCTCACGGAATaGCGGAACACCTCCAGGCTC +
Preference number: 4 (lower is better)
Translates to: LFPSHPQATHIQPQRKTYRALTE*RNTSRL
Trigger: GAGCCTGGAGGTGTTCCGGCATTCCGTGAGGGCCCT...ATACGTTTTTCTCTGTGGCTGTATGTGGGTTGCTTGGGGGTGGGATGGGAAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000252729.7
ENST00000352529.1
CDS-3UTR CCA 90 bp AAAAAGTCTCTCCCGGCAAGTGAATCGATCCAGACCTGGGAAATGAAGGGGCCCTCATCTTATGGCCGGTaGGGTCGGGAAGGGGGAGGA +
Preference number: 4 (lower is better)
Translates to: KKSLPASESIQTWEMKGPSSYGR*GREGGG
Trigger: TCCTCCCCCTTCCCGACCCCACCGGCCATAAGATGA...GGGCCCCTTCATTTCCCAGGTCTGGATCGATTCACTTGCCGGGAGAGACTTTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000252729.7
ENST00000352529.1
CDS-3UTR TCA 90 bp AGAGCCTCTTCCCATCCCACCCCCAAGCAACCCACATACAGCCACAGAGAAAAAGTCTCTCCCGGCAAGTaGATCGATCCAGACCTGGGA +
Preference number: 4 (lower is better)
Translates to: RASSHPTPKQPTYSHREKVSPGK*IDPDLG
Trigger: TCCCAGGTCTGGATCGATTCACTTGCCGGGAGAGAC...TTTTTCTCTGTGGCTGTATGTGGGTTGCTTGGGGGTGGGATGGGAAGAGGCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000252729.7
ENST00000352529.1
CDS-3UTR GCA 90 bp TCCCACCCCCAAGCAACCCACATACAGCCACAGAGAAAAACGTATTTACAGAGGCCCGCTGAAGCTCCCTaGAGCTCCAAGGGGCTGCTT +
Preference number: 4 (lower is better)
Translates to: SHPQATHIQPQRKTYLQRPAEAP*SSKGLL
Trigger: AAGCAGCCCCTTGGAGCTGCAGGGAGCTTCAGCGGG...CCTCTGTAAATACGTTTTTCTCTGTGGCTGTATGTGGGTTGCTTGGGGGTGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000252729.7
ENST00000352529.1
CDS-3UTR CCA 90 bp TCCCACCCCCAAGCAACCCACATACAGCCACAGAGAAAAACGTATTTACAGAGGCACACTATGGGGCTGTaGTCCGCACTGCGGCTCGGA +
Preference number: 4 (lower is better)
Translates to: SHPQATHIQPQRKTYLQRHTMGL*SALRLG
Trigger: TCCGAGCCGCAGTGCGGACCACAGCCCCATAGTGTG...CCTCTGTAAATACGTTTTTCTCTGTGGCTGTATGTGGGTTGCTTGGGGGTGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000252729.7
CDS-3UTR CCA 90 bp AGAGCCTCTTCCCATCCCACCCCCAAGCAACCCACATACAGCCACAGAGAAAAAGGCTCAGAAGAGGACTaGGCCTCGCTGGAATTCAGG +
Preference number: 4 (lower is better)
Translates to: RASSHPTPKQPTYSHREKGSEED*ASLEFR
Trigger: CCTGAATTCCAGCGAGGCCCAGTCCTCTTCTGAGCC...TTTTTCTCTGTGGCTGTATGTGGGTTGCTTGGGGGTGGGATGGGAAGAGGCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000252729.7
CDS-3UTR CCA 90 bp AGAGCCTCTTCCCATCCCACCCCCAAGCAACCCACATACAGCCACAGAGAAAAAGGTCCTGTGTGTGTTTaGAGGAGATGTGGCCGGGGT +
Preference number: 4 (lower is better)
Translates to: RASSHPTPKQPTYSHREKGPVCV*RRCGRG
Trigger: ACCCCGGCCACATCTCCTCCAAACACACACAGGACC...TTTTTCTCTGTGGCTGTATGTGGGTTGCTTGGGGGTGGGATGGGAAGAGGCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000252729.7
ENST00000352529.1
CDS-3UTR TCA 90 bp CTGCAGATGAGTTGTAAAAAGTCTCTCCCGGCAAGTGAATCGATCCAGACCTGGAGAACTGGTGCCCGCTaGAGCTCCCTGCAGCTCCAA +
Preference number: 4 (lower is better)
Translates to: LQMSCKKSLPASESIQTWRTGAR*SSLQLQ
Trigger: TTGGAGCTGCAGGGAGCTTCAGCGGGCACCAGTTCT...CCAGGTCTGGATCGATTCACTTGCCGGGAGAGACTTTTTACAACTCATCTGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252729.7
ENST00000352529.1
CDS-3UTR GCA 90 bp TTCCCATCCCACCCCCAAGCAACCCACATACAGCCACAGAGAAAAACGTATTTAACCCGCAAGAGACGCTaGGCCCCTTCGGGATCAGTC +
Preference number: 4 (lower is better)
Translates to: FPSHPQATHIQPQRKTYLTRKRR*APSGSV
Trigger: GACTGATCCCGAAGGGGCGCAGCGTCTCTTGCGGGT...TAAATACGTTTTTCTCTGTGGCTGTATGTGGGTTGCTTGGGGGTGGGATGGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000252729.7
CDS-3UTR GCA 90 bp TCCCACCCCCAAGCAACCCACATACAGCCACAGAGAAAAACGTATTTACAGAGGCTTCGCACACGGCGCTaGCGTTGGCCTTGTAGGTGT +
Preference number: 4 (lower is better)
Translates to: SHPQATHIQPQRKTYLQRLRTRR*RWPCRC
Trigger: ACACCTACAAGGCCAACGGCAGCGCCGTGTGCGAAG...CCTCTGTAAATACGTTTTTCTCTGTGGCTGTATGTGGGTTGCTTGGGGGTGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000252729.7
ENST00000352529.1
CDS-3UTR GCA 90 bp ATCCCACCCCCAAGCAACCCACATACAGCCACAGAGAAAAACGTATTTACAGAGAGGGCCCTCACGGAATaGCGGAACACCTCCAGGCTC +
Preference number: 4 (lower is better)
Translates to: IPPPSNPHTATEKNVFTERALTE*RNTSRL
Trigger: GAGCCTGGAGGTGTTCCGGCATTCCGTGAGGGCCCT...CTCTGTAAATACGTTTTTCTCTGTGGCTGTATGTGGGTTGCTTGGGGGTGGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000252729.7
ENST00000352529.1
CDS-3UTR CCA 90 bp AAAAAGTCTCTCCCGGCAAGTGAATCGATCCAGACCTGGGAAATGAAGGGGCCCCTAGGGCTAAGAGTTTaGGGTACCCAGGAAGGGACC +
Preference number: 4 (lower is better)
Translates to: KKSLPASESIQTWEMKGPLGLRV*GTQEGT
Trigger: GGTCCCTTCCTGGGTACCCCAAACTCTTAGCCCTAG...GGGCCCCTTCATTTCCCAGGTCTGGATCGATTCACTTGCCGGGAGAGACTTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000252729.7
ENST00000352529.1
CDS-3UTR CCA 90 bp CAGGTCCCCGCCAGTCTTCTCTGGGGACCCTCGTTTGCAAAGAGCCTCTTCCCACTTGCAGGAAGAAGTTaGACCACATCATCTTATGGC +
Preference number: 4 (lower is better)
Translates to: QVPASLLWGPSFAKSLFPLAGRS*TTSSYG
Trigger: GCCATAAGATGATGTGGTCCAACTTCTTCCTGCAAG...TGGGAAGAGGCTCTTTGCAAACGAGGGTCCCCAGAGAAGACTGGCGGGGACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252729.7
ENST00000352529.1
CDS-3UTR CCA 90 bp CTCCCGGCAAGTGAATCGATCCAGACCTGGGAAATGAAGGGGCCCCCAACTCCCCTTGCAGGAAGAAGTTaGACCACATCATCTTATGGC +
Preference number: 4 (lower is better)
Translates to: LPASESIQTWEMKGPPTPLAGRS*TTSSYG
Trigger: GCCATAAGATGATGTGGTCCAACTTCTTCCTGCAAG...GGGAGTTGGGGGCCCCTTCATTTCCCAGGTCTGGATCGATTCACTTGCCGGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000252729.7
ENST00000352529.1
CDS-3UTR CCA 90 bp GCAAGTGAATCGATCCAGACCTGGGAAATGAAGGGGCCCCCAACTCCCACCCAAGGTCAAAGGGCTCGGTaGTTGCTTAGAGAAGTCTCA +
Preference number: 4 (lower is better)
Translates to: ASESIQTWEMKGPPTPTQGQRAR*LLREVS
Trigger: TGAGACTTCTCTAAGCAACCACCGAGCCCTTTGACC...TTGGGTGGGAGTTGGGGGCCCCTTCATTTCCCAGGTCTGGATCGATTCACTTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252729.7
ENST00000352529.1
CDS-3UTR CCA 90 bp GCAAGTGAATCGATCCAGACCTGGGAAATGAAGGGGCCCCCAACTCCCACCCAAATCTTGGGGGTACAATaGAGAAGGTCAAAGGGCTCG +
Preference number: 4 (lower is better)
Translates to: ASESIQTWEMKGPPTPTQILGVQ*RRSKGS
Trigger: CGAGCCCTTTGACCTTCTCCATTGTACCCCCAAGAT...TTGGGTGGGAGTTGGGGGCCCCTTCATTTCCCAGGTCTGGATCGATTCACTTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000252729.7
ENST00000352529.1
CDS-3UTR CCA 90 bp CAGGTCCCCGCCAGTCTTCTCTGGGGACCCTCGTTTGCAAAGAGCCTCTTCCCAAGTTTCTCTAGGAGATaGGGCAAAAAGATCTTGGGG +
Preference number: 4 (lower is better)
Translates to: QVPASLLWGPSFAKSLFPSFSRR*GKKILG
Trigger: CCCCAAGATCTTTTTGCCCCATCTCCTAGAGAAACT...TGGGAAGAGGCTCTTTGCAAACGAGGGTCCCCAGAGAAGACTGGCGGGGACCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000252729.7
ENST00000352529.1
CDS-3UTR TCA 90 bp ATCCCACCCCCAAGCAACCCACATACAGCCACAGAGAAAAACGTATTTACAGAGAGAACTGGTGCCCGCTaGAGCTCCCTGCAGCTCCAA +
Preference number: 4 (lower is better)
Translates to: IPPPSNPHTATEKNVFTERTGAR*SSLQLQ
Trigger: TTGGAGCTGCAGGGAGCTTCAGCGGGCACCAGTTCT...CTCTGTAAATACGTTTTTCTCTGTGGCTGTATGTGGGTTGCTTGGGGGTGGGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000252729.7
ENST00000352529.1
CDS-3UTR TCA 90 bp CTGCAGATGAGTTGTAAAAAGTCTCTCCCGGCAAGTGAATCGATCCAGACCTGGTGGCCTTGTAGGTGTTaGGCTCCACCCAGAACTCGG +
Preference number: 4 (lower is better)
Translates to: LQMSCKKSLPASESIQTWWPCRC*APPRTR
Trigger: CCGAGTTCTGGGTGGAGCTCAACACCTACAAGGCCA...CCAGGTCTGGATCGATTCACTTGCCGGGAGAGACTTTTTACAACTCATCTGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252729.7
ENST00000352529.1
CDS-3UTR GCA 90 bp AAAAAGTCTCTCCCGGCAAGTGAATCGATCCAGACCTGGGAAATGAAGGGGCCCAAAGGGCTCGGTGGTTaGTTAGAGAAGTCTCACGCG +
Preference number: 4 (lower is better)
Translates to: KKSLPASESIQTWEMKGPKGLGG*LEKSHA
Trigger: CGCGTGAGACTTCTCTAAGCAACCACCGAGCCCTTT...GGGCCCCTTCATTTCCCAGGTCTGGATCGATTCACTTGCCGGGAGAGACTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252729.7
ENST00000352529.1
CDS-3UTR CCA 90 bp ATCCCACCCCCAAGCAACCCACATACAGCCACAGAGAAAAACGTATTTACAGAGCGGAAAAGGAAGACCTaGGGTCCCGGGAAGCTCCCA +
Preference number: 4 (lower is better)
Translates to: IPPPSNPHTATEKNVFTERKRKT*GPGKLP
Trigger: TGGGAGCTTCCCGGGACCCCAGGTCTTCCTTTTCCG...CTCTGTAAATACGTTTTTCTCTGTGGCTGTATGTGGGTTGCTTGGGGGTGGGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000252729.7
CDS-3UTR CCA 90 bp CTGCAGATGAGTTGTAAAAAGTCTCTCCCGGCAAGTGAATCGATCCAGACCTGGTGTTTGGAGGAGATGTaGCCGGGGTTCCCTTGGGCT +
Preference number: 4 (lower is better)
Translates to: LQMSCKKSLPASESIQTWCLEEM*PGFPWA
Trigger: AGCCCAAGGGAACCCCGGCCACATCTCCTCCAAACA...CCAGGTCTGGATCGATTCACTTGCCGGGAGAGACTTTTTACAACTCATCTGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252729.7
ENST00000352529.1
CDS-3UTR CCA 90 bp TCCCACCCCCAAGCAACCCACATACAGCCACAGAGAAAAACGTATTTACAGAGGAATGATCCCCAGGGCTaGGGAAGCCTCTGGGGTTCA +
Preference number: 4 (lower is better)
Translates to: SHPQATHIQPQRKTYLQRNDPQG*GSLWGS
Trigger: TGAACCCCAGAGGCTTCCCCAGCCCTGGGGATCATT...CCTCTGTAAATACGTTTTTCTCTGTGGCTGTATGTGGGTTGCTTGGGGGTGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000252729.7
ENST00000352529.1
CDS-3UTR CCA 90 bp GCAAGTGAATCGATCCAGACCTGGGAAATGAAGGGGCCCCCAACTCCCACCCAAGAGCCGAGTCCTGTCTaGAATCTCAAATGCGAAAGT +
Preference number: 4 (lower is better)
Translates to: ASESIQTWEMKGPPTPTQEPSPV*NLKCES
Trigger: ACTTTCGCATTTGAGATTCCAGACAGGACTCGGCTC...TTGGGTGGGAGTTGGGGGCCCCTTCATTTCCCAGGTCTGGATCGATTCACTTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252729.7
ENST00000352529.1
CDS-3UTR TCA 90 bp CTGCAGATGAGTTGTAAAAAGTCTCTCCCGGCAAGTGAATCGATCCAGACCTGGAGAGCTCCAGAGGAATaGGAACTGGTGCCCGCTGAA +
Preference number: 4 (lower is better)
Translates to: LQMSCKKSLPASESIQTWRAPEE*ELVPAE
Trigger: TTCAGCGGGCACCAGTTCTCATTCCTCTGGAGCTCT...CCAGGTCTGGATCGATTCACTTGCCGGGAGAGACTTTTTACAACTCATCTGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252729.7
ENST00000352529.1
CDS-3UTR TCA 90 bp AAAAAGTCTCTCCCGGCAAGTGAATCGATCCAGACCTGGGAAATGAAGGGGCCCACAAGGCCCCCACCCTaGGGTTTAGAGATAGAATTC +
Preference number: 4 (lower is better)
Translates to: KKSLPASESIQTWEMKGPTRPPP*GLEIEF
Trigger: GAATTCTATCTCTAAACCTCAGGGTGGGGGCCTTGT...GGGCCCCTTCATTTCCCAGGTCTGGATCGATTCACTTGCCGGGAGAGACTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000252729.7
ENST00000352529.1
CDS-3UTR TCA 90 bp AAAAAGTCTCTCCCGGCAAGTGAATCGATCCAGACCTGGGAAATGAAGGGGCCCACCCGGAGCTGCAGATaGGTTGTAAAAAGTCTCTCC +
Preference number: 4 (lower is better)
Translates to: KKSLPASESIQTWEMKGPTRSCR*VVKSLS
Trigger: GGAGAGACTTTTTACAACTCATCTGCAGCTCCGGGT...GGGCCCCTTCATTTCCCAGGTCTGGATCGATTCACTTGCCGGGAGAGACTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000252729.7
ENST00000352529.1
CDS-3UTR CCA 90 bp TCCCACCCCCAAGCAACCCACATACAGCCACAGAGAAAAACGTATTTACAGAGGCAGAGGAATGAGAACTaGTGCCCGCTGAAGCTCCCT +
Preference number: 4 (lower is better)
Translates to: SHPQATHIQPQRKTYLQRQRNEN*CPLKLP
Trigger: AGGGAGCTTCAGCGGGCACCAGTTCTCATTCCTCTG...CCTCTGTAAATACGTTTTTCTCTGTGGCTGTATGTGGGTTGCTTGGGGGTGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000252729.7
ENST00000352529.1
CDS-3UTR CCA 90 bp TCCCACCCCCAAGCAACCCACATACAGCCACAGAGAAAAACGTATTTACAGAGGGAATCGATCCAGACCTaGGAAATGAAGGGGCCCCCA +
Preference number: 4 (lower is better)
Translates to: SHPQATHIQPQRKTYLQRESIQT*EMKGPP
Trigger: TGGGGGCCCCTTCATTTCCCAGGTCTGGATCGATTC...CCTCTGTAAATACGTTTTTCTCTGTGGCTGTATGTGGGTTGCTTGGGGGTGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000252729.7
ENST00000352529.1
CDS-3UTR TCA 90 bp TTCCCATCCCACCCCCAAGCAACCCACATACAGCCACAGAGAAAAACGTATTTAAGAGCTCCAGAGGAATaGGAACTGGTGCCCGCTGAA +
Preference number: 4 (lower is better)
Translates to: FPSHPQATHIQPQRKTYLRAPEE*ELVPAE
Trigger: TTCAGCGGGCACCAGTTCTCATTCCTCTGGAGCTCT...TAAATACGTTTTTCTCTGTGGCTGTATGTGGGTTGCTTGGGGGTGGGATGGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000252729.7
ENST00000352529.1
CDS-3UTR GCA 90 bp AGAGCCTCTTCCCATCCCACCCCCAAGCAACCCACATACAGCCACAGAGAAAAATGCGAAAGTCGAGATTaGTTCTGGGGTTCAGAAGAG +
Preference number: 4 (lower is better)
Translates to: RASSHPTPKQPTYSHREKCESRD*FWGSEE
Trigger: CTCTTCTGAACCCCAGAAGCAATCTCGACTTTCGCA...TTTTTCTCTGTGGCTGTATGTGGGTTGCTTGGGGGTGGGATGGGAAGAGGCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000252729.7
ENST00000352529.1
CDS-3UTR GCA 90 bp TTCCCATCCCACCCCCAAGCAACCCACATACAGCCACAGAGAAAAACGTATTTACGCCGGTTCTCCTCTTaGAGGAAGAAGTTGGACCAC +
Preference number: 4 (lower is better)
Translates to: FPSHPQATHIQPQRKTYLRRFSS*RKKLDH
Trigger: GTGGTCCAACTTCTTCCTGCAAGAGGAGAACCGGCG...TAAATACGTTTTTCTCTGTGGCTGTATGTGGGTTGCTTGGGGGTGGGATGGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000252729.7
ENST00000352529.1
CDS-3UTR CCA 90 bp TCCCACCCCCAAGCAACCCACATACAGCCACAGAGAAAAACGTATTTACAGAGGTTGCCCTCAAGAACTTaGCAAAGAAGACGGGGCCCA +
Preference number: 4 (lower is better)
Translates to: SHPQATHIQPQRKTYLQRLPSRT*QRRRGP
Trigger: TGGGCCCCGTCTTCTTTGCCAAGTTCTTGAGGGCAA...CCTCTGTAAATACGTTTTTCTCTGTGGCTGTATGTGGGTTGCTTGGGGGTGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000252729.7
ENST00000352529.1
CDS-3UTR TCA 90 bp TCCCACCCCCAAGCAACCCACATACAGCCACAGAGAAAAACGTATTTACAGAGGACCCGGAGCTGCAGATaGGTTGTAAAAAGTCTCTCC +
Preference number: 4 (lower is better)
Translates to: SHPQATHIQPQRKTYLQRTRSCR*VVKSLS
Trigger: GGAGAGACTTTTTACAACTCATCTGCAGCTCCGGGT...CCTCTGTAAATACGTTTTTCTCTGTGGCTGTATGTGGGTTGCTTGGGGGTGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000252729.7
ENST00000352529.1
CDS-3UTR GCA 90 bp CTCTTCCCATCCCACCCCCAAGCAACCCACATACAGCCACAGAGAAAAACGTATTGCGAAAGTCGAGATTaGTTCTGGGGTTCAGAAGAG +
Preference number: 4 (lower is better)
Translates to: LFPSHPQATHIQPQRKTYCESRD*FWGSEE
Trigger: CTCTTCTGAACCCCAGAAGCAATCTCGACTTTCGCA...ATACGTTTTTCTCTGTGGCTGTATGTGGGTTGCTTGGGGGTGGGATGGGAAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000252729.7
ENST00000352529.1
CDS-3UTR GCA 90 bp CTGCAGATGAGTTGTAAAAAGTCTCTCCCGGCAAGTGAATCGATCCAGACCTGGTCTCTGAAAGATGCGTaGATTCTCCCCCGTGGTGAA +
Preference number: 4 (lower is better)
Translates to: LQMSCKKSLPASESIQTWSLKDA*ILPRGE
Trigger: TTCACCACGGGGGAGAATGCACGCATCTTTCAGAGA...CCAGGTCTGGATCGATTCACTTGCCGGGAGAGACTTTTTACAACTCATCTGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000252729.7
CDS-3UTR GCA 90 bp ATCCCACCCCCAAGCAACCCACATACAGCCACAGAGAAAAACGTATTTACAGAGTGGTTCTCTGAAAGATaGGTGCATTCTCCCCCGTGG +
Preference number: 4 (lower is better)
Translates to: IPPPSNPHTATEKNVFTEWFSER*VHSPPW
Trigger: CCACGGGGGAGAATGCACGCATCTTTCAGAGAACCA...CTCTGTAAATACGTTTTTCTCTGTGGCTGTATGTGGGTTGCTTGGGGGTGGGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000252729.7
CDS-3UTR CCA 90 bp TTCCCATCCCACCCCCAAGCAACCCACATACAGCCACAGAGAAAAACGTATTTAAGGACTGGGCCTCGCTaGAATTCAGGAAAAGGGGAT +
Preference number: 4 (lower is better)
Translates to: FPSHPQATHIQPQRKTYLRTGPR*NSGKGD
Trigger: ATCCCCTTTTCCTGAATTCCAGCGAGGCCCAGTCCT...TAAATACGTTTTTCTCTGTGGCTGTATGTGGGTTGCTTGGGGGTGGGATGGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000252729.7
CDS-3UTR CCA 90 bp CTCTTCCCATCCCACCCCCAAGCAACCCACATACAGCCACAGAGAAAAACGTATGAGCCGAGTCCTGTCTaGAATCTCAAATGCGAAAGT +
Preference number: 4 (lower is better)
Translates to: LFPSHPQATHIQPQRKTYEPSPV*NLKCES
Trigger: ACTTTCGCATTTGAGATTCCAGACAGGACTCGGCTC...ATACGTTTTTCTCTGTGGCTGTATGTGGGTTGCTTGGGGGTGGGATGGGAAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000252729.7
ENST00000352529.1
CDS-3UTR GCA 90 bp TCCCACCCCCAAGCAACCCACATACAGCCACAGAGAAAAACGTATTTACAGAGGTGCTATCACCGCAGCTaGCAGATTCACCTCTTTCTT +
Preference number: 4 (lower is better)
Translates to: SHPQATHIQPQRKTYLQRCYHRS*QIHLFL
Trigger: AAGAAAGAGGTGAATCTGGCAGCTGCGGTGATAGCA...CCTCTGTAAATACGTTTTTCTCTGTGGCTGTATGTGGGTTGCTTGGGGGTGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000252729.7
CDS-3UTR GCA 90 bp ATCCCACCCCCAAGCAACCCACATACAGCCACAGAGAAAAACGTATTTACAGAGTCGGAGCAGGAACTCTaGACCTTTACTGAGCACCAT +
Preference number: 4 (lower is better)
Translates to: IPPPSNPHTATEKNVFTESEQEL*TFTEHH
Trigger: ATGGTGCTCAGTAAAGGTGCAGAGTTCCTGCTCCGA...CTCTGTAAATACGTTTTTCTCTGTGGCTGTATGTGGGTTGCTTGGGGGTGGGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000252729.7
CDS-3UTR TCA 90 bp TCCCACCCCCAAGCAACCCACATACAGCCACAGAGAAAAACGTATTTACAGAGGTTCTTTGTGGTTCTCTaGAAGATGCGTGCATTCTCC +
Preference number: 4 (lower is better)
Translates to: SHPQATHIQPQRKTYLQRFFVVL*KMRAFS
Trigger: GGAGAATGCACGCATCTTTCAGAGAACCACAAAGAA...CCTCTGTAAATACGTTTTTCTCTGTGGCTGTATGTGGGTTGCTTGGGGGTGGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000252729.7
CDS-3UTR GCA 90 bp CTGCAGATGAGTTGTAAAAAGTCTCTCCCGGCAAGTGAATCGATCCAGACCTGGGTCTGGAATCTCAAATaGGAAAGTCGAGATTGCTTC +
Preference number: 4 (lower is better)
Translates to: LQMSCKKSLPASESIQTWVWNLK*ESRDCF
Trigger: GAAGCAATCTCGACTTTCGCATTTGAGATTCCAGAC...CCAGGTCTGGATCGATTCACTTGCCGGGAGAGACTTTTTACAACTCATCTGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252729.7
ENST00000352529.1
CDS-3UTR GCA 90 bp TCCCACCCCCAAGCAACCCACATACAGCCACAGAGAAAAACGTATTTACAGAGGGTCTGGAATCTCAAATaGGAAAGTCGAGATTGCTTC +
Preference number: 4 (lower is better)
Translates to: SHPQATHIQPQRKTYLQRVWNLK*ESRDCF
Trigger: GAAGCAATCTCGACTTTCGCATTTGAGATTCCAGAC...CCTCTGTAAATACGTTTTTCTCTGTGGCTGTATGTGGGTTGCTTGGGGGTGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000252729.7
ENST00000352529.1
CDS-3UTR CCA 90 bp CTCTTCCCATCCCACCCCCAAGCAACCCACATACAGCCACAGAGAAAAACGTATAGTCGAGATTGCTTCTaGGGTTCAGAAGAGAAAAAT +
Preference number: 4 (lower is better)
Translates to: LFPSHPQATHIQPQRKTYSRDCF*GSEEKN
Trigger: ATTTTTCTCTTCTGAACCCCAGAAGCAATCTCGACT...ATACGTTTTTCTCTGTGGCTGTATGTGGGTTGCTTGGGGGTGGGATGGGAAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000252729.7
ENST00000352529.1
CDS-3UTR CCA 90 bp ATCCCACCCCCAAGCAACCCACATACAGCCACAGAGAAAAACGTATTTACAGAGAGTTTCTCTAGGAGATaGGGCAAAAAGATCTTGGGG +
Preference number: 4 (lower is better)
Translates to: IPPPSNPHTATEKNVFTESFSRR*GKKILG
Trigger: CCCCAAGATCTTTTTGCCCCATCTCCTAGAGAAACT...CTCTGTAAATACGTTTTTCTCTGTGGCTGTATGTGGGTTGCTTGGGGGTGGGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000252729.7
ENST00000352529.1
CDS-3UTR CCA 90 bp TTCCCATCCCACCCCCAAGCAACCCACATACAGCCACAGAGAAAAACGTATTTAAGTCGAGATTGCTTCTaGGGTTCAGAAGAGAAAAAT +
Preference number: 4 (lower is better)
Translates to: FPSHPQATHIQPQRKTYLSRDCF*GSEEKN
Trigger: ATTTTTCTCTTCTGAACCCCAGAAGCAATCTCGACT...TAAATACGTTTTTCTCTGTGGCTGTATGTGGGTTGCTTGGGGGTGGGATGGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000252729.7
ENST00000352529.1
CDS CCA 90 bp CCCCACGCCGCAGCCCAGGGACCAGGAGTACTCGTAGGTGAGGCGTaGGGCCGGGGGAGGCTCCGGGCTGACTCTCTGCAGCAGGGCCCT +
Preference number: 5 (lower is better)
Translates to: PHAAAQGPGVLVGEA*GRGRLRADSLQQGP
Trigger: AGGGCCCTGCTGCAGAGAGTCAGCCCGGAGCCTCCCCCGGCCCCACGCCTCACCTACGAGTACTCCTGGTCCCTGGGCTGCGGCGTGGGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000252729.7
ENST00000346968.2
ENST00000352529.1
CDS GCA 90 bp GGGGGAGGCTCCGGGCTGACTCTCTGCAGCAGGGCCCTCACGGAATaGCGGAACACCTCCAGGCTCACCAAGAGCAGCAGGCCTCCGGGC +
Preference number: 5 (lower is better)
Translates to: GGGSGLTLCSRALTE*RNTSRLTKSSRPPG
Trigger: GCCCGGAGGCCTGCTGCTCTTGGTGAGCCTGGAGGTGTTCCGGCATTCCGTGAGGGCCCTGCTGCAGAGAGTCAGCCCGGAGCCTCCCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352529.1
CDS-3UTR CAA 90 bp CGAGGCCAGACCCTTCGCTATCTCCCCCAACCGCACCCGGAGCTGCAGATGAGTGCCCGGTGCCCCCGCTaGGGACAGAGGGACCCCCAG +
Preference number: 5 (lower is better)
Translates to: RGQTLRYLPQPHPELQMSARCPR*GQRDPQ
Trigger: CTGGGGGTCCCTCTGTCCCAAGCGGGGGCACCGGGC...ACTCATCTGCAGCTCCGGGTGCGGTTGGGGGAGATAGCGAAGGGTCTGGCCTCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000252729.7
ENST00000352529.1
CDS TCA 90 bp GGTGGGCCGCTTCGCACACGGCGCTGCCGTTGGCCTTGTAGGTGTTaGGCTCCACCCAGAACTCGGTGCCCACGGACAGCACCGCCAGCG +
Preference number: 5 (lower is better)
Translates to: GGPLRTRRCRWPCRC*APPRTRCPRTAPPA
Trigger: CGCTGGCGGTGCTGTCCGTGGGCACCGAGTTCTGGGTGGAGCTCAACACCTACAAGGCCAACGGCAGCGCCGTGTGCGAAGCGGCCCACC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252729.7
ENST00000346968.2
ENST00000352529.1
CDS GCA 90 bp GGGGGAGGCTCCGGGCTGACTCTCTGCAGCAGGGCCCTCACGGAATaGCGGAACACCTCCAGGCTCACCAAGAGCAGCAGGCCTGAGAGG +
Preference number: 5 (lower is better)
Translates to: GGGSGLTLCSRALTE*RNTSRLTKSSRPER
Trigger: CCTCTCAGGCCTGCTGCTCTTGGTGAGCCTGGAGGTGTTCCGGCATTCCGTGAGGGCCCTGCTGCAGAGAGTCAGCCCGGAGCCTCCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000252729.7
CDS-3UTR CAA 90 bp CAGGTCCCCGCCAGTCTTCTCTGGGGACCCTCGTTTGCAAAGAGCCTCTTCCCAGCCCGGTGCCCCCGCTaGGGACAGAGGGACCCCCAG +
Preference number: 5 (lower is better)
Translates to: QVPASLLWGPSFAKSLFPARCPR*GQRDPQ
Trigger: CTGGGGGTCCCTCTGTCCCAAGCGGGGGCACCGGGC...TGGGAAGAGGCTCTTTGCAAACGAGGGTCCCCAGAGAAGACTGGCGGGGACCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000252729.7
ENST00000352529.1
CDS GCA 90 bp GGGGGAGGCTCCGGGCTGACTCTCTGCAGCAGGGCCCTCACGGAATaGCGGAACACCTCCAGGCTCACCAAGAGCAGCAGGCCTTTCTTT +
Preference number: 5 (lower is better)
Translates to: GGGSGLTLCSRALTE*RNTSRLTKSSRPFF
Trigger: AAAGAAAGGCCTGCTGCTCTTGGTGAGCCTGGAGGTGTTCCGGCATTCCGTGAGGGCCCTGCTGCAGAGAGTCAGCCCGGAGCCTCCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000346968.2
CDS-3UTR CAA 90 bp CAGGTCCCCGCCAGTCTTCTCTGGGGACCCTCGTTTGCAAAGAGCCTCTTCCCAGCCTGCCACAGCCGCTaGGTGCACGCCTTCCACAGC +
Preference number: 5 (lower is better)
Translates to: QVPASLLWGPSFAKSLFPACHSR*VHAFHS
Trigger: GCTGTGGAAGGCGTGCACCAAGCGGCTGTGGCAGGC...TGGGAAGAGGCTCTTTGCAAACGAGGGTCCCCAGAGAAGACTGGCGGGGACCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252729.7
ENST00000352529.1
CDS-3UTR CAA 90 bp ACAGCGAGGCCAGACCCTTCGCTATCTCCCCCAACCGCACCCGGAGCTGCAGATGTTGCCCTCAAGAACTaGGCAAAGAAGACGGGGCCC +
Preference number: 5 (lower is better)
Translates to: TARPDPSLSPPTAPGAADVALKN*AKKTGP
Trigger: GGGCCCCGTCTTCTTTGCCAAGTTCTTGAGGGCAAC...ATCTGCAGCTCCGGGTGCGGTTGGGGGAGATAGCGAAGGGTCTGGCCTCGCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252729.7
ENST00000352529.1
CDS-3UTR CAA 90 bp CTCCCGGCAAGTGAATCGATCCAGACCTGGGAAATGAAGGGGCCCCCAACTCCCGTGGCCGGGGTTCCCTaGGGCTCAGAGTTTGAGAAC +
Preference number: 5 (lower is better)
Translates to: LPASESIQTWEMKGPPTPVAGVP*GSEFEN
Trigger: GTTCTCAAACTCTGAGCCCAAGGGAACCCCGGCCAC...GGGAGTTGGGGGCCCCTTCATTTCCCAGGTCTGGATCGATTCACTTGCCGGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000252729.7
ENST00000352529.1
CDS-3UTR CAA 90 bp ACAGCGAGGCCAGACCCTTCGCTATCTCCCCCAACCGCACCCGGAGCTGCAGATACTAGGGCTAAGAGTTaGGGGTACCCAGGAAGGGAC +
Preference number: 5 (lower is better)
Translates to: TARPDPSLSPPTAPGAADTRAKS*GYPGRD
Trigger: GTCCCTTCCTGGGTACCCCAAACTCTTAGCCCTAGT...ATCTGCAGCTCCGGGTGCGGTTGGGGGAGATAGCGAAGGGTCTGGCCTCGCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252729.7
ENST00000352529.1
CDS-3UTR CAA 90 bp ACAGCGAGGCCAGACCCTTCGCTATCTCCCCCAACCGCACCCGGAGCTGCAGATAGAGGAGGGTCTAGGTaGCCCTCAAGAACTTGGCAA +
Preference number: 5 (lower is better)
Translates to: TARPDPSLSPPTAPGAADRGGSR*PSRTWQ
Trigger: TTGCCAAGTTCTTGAGGGCAACCTAGACCCTCCTCT...ATCTGCAGCTCCGGGTGCGGTTGGGGGAGATAGCGAAGGGTCTGGCCTCGCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252729.7
ENST00000352529.1
CDS-3UTR CAA 90 bp AAAAAGTCTCTCCCGGCAAGTGAATCGATCCAGACCTGGGAAATGAAGGGGCCCGCCTGCCACAGCCGCTaGGTGCACGCCTTCCACAGC +
Preference number: 5 (lower is better)
Translates to: KKSLPASESIQTWEMKGPACHSR*VHAFHS
Trigger: GCTGTGGAAGGCGTGCACCAAGCGGCTGTGGCAGGC...GGGCCCCTTCATTTCCCAGGTCTGGATCGATTCACTTGCCGGGAGAGACTTTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252729.7
ENST00000352529.1
CDS CCA 90 bp AGTAGGACCCCGGCATCCACAGAAGGAGAAGAACAGAGCCCTGGCTaGGGCTCAGAAGAGGACTGGGCCTCGCTGGAATTCAGGAAAAGG +
Preference number: 5 (lower is better)
Translates to: SRTPASTEGEEQSPG*GSEEDWASLEFRKR
Trigger: CCTTTTCCTGAATTCCAGCGAGGCCCAGTCCTCTTCTGAGCCCCAGCCAGGGCTCTGTTCTTCTCCTTCTGTGGATGCCGGGGTCCTACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000252729.7
CDS-3UTR CAA 90 bp CAGGTCCCCGCCAGTCTTCTCTGGGGACCCTCGTTTGCAAAGAGCCTCTTCCCATTGAGAACAGAGGACTaGGGGACCCTCTGGGATTCG +
Preference number: 5 (lower is better)
Translates to: QVPASLLWGPSFAKSLFPLRTED*GTLWDS
Trigger: CGAATCCCAGAGGGTCCCCAAGTCCTCTGTTCTCAA...TGGGAAGAGGCTCTTTGCAAACGAGGGTCCCCAGAGAAGACTGGCGGGGACCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000252729.7
CDS-3UTR CAA 90 bp CTCCCGGCAAGTGAATCGATCCAGACCTGGGAAATGAAGGGGCCCCCAACTCCCCCTTGGGCTCAGAGTTaGAGAACAGAGGACTTGGGG +
Preference number: 5 (lower is better)
Translates to: LPASESIQTWEMKGPPTPPWAQS*RTEDLG
Trigger: CCCCAAGTCCTCTGTTCTCAAACTCTGAGCCCAAGG...GGGAGTTGGGGGCCCCTTCATTTCCCAGGTCTGGATCGATTCACTTGCCGGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000252729.7
CDS-3UTR CAA 90 bp CTCCCGGCAAGTGAATCGATCCAGACCTGGGAAATGAAGGGGCCCCCAACTCCCCAAAGGGCTCGGTGGTaGCTTAGAGAAGTCTCACGC +
Preference number: 5 (lower is better)
Translates to: LPASESIQTWEMKGPPTPQRARW*LREVSR
Trigger: GCGTGAGACTTCTCTAAGCAACCACCGAGCCCTTTG...GGGAGTTGGGGGCCCCTTCATTTCCCAGGTCTGGATCGATTCACTTGCCGGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000252729.7
ENST00000352529.1
CDS-3UTR CAA 90 bp CTCCCGGCAAGTGAATCGATCCAGACCTGGGAAATGAAGGGGCCCCCAACTCCCTCTGGGGACCCTCGTTaGCAAAGAGCCTCTTCCCAT +
Preference number: 5 (lower is better)
Translates to: LPASESIQTWEMKGPPTPSGDPR*QRASSH
Trigger: ATGGGAAGAGGCTCTTTGCAAACGAGGGTCCCCAGA...GGGAGTTGGGGGCCCCTTCATTTCCCAGGTCTGGATCGATTCACTTGCCGGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000252729.7
ENST00000352529.1
CDS CCA 90 bp CTGAGGTCCTGTGTGTGTTTGGAGGAGATGTGGCCGGGGTTCCCTTaGGCTCAGAGTTTGAGAACAGAGGACTTGGGGACCCTCTGGGAT +
Preference number: 5 (lower is better)
Translates to: LRSCVCLEEMWPGFP*AQSLRTEDLGTLWD
Trigger: ATCCCAGAGGGTCCCCAAGTCCTCTGTTCTCAAACTCTGAGCCCAAGGGAACCCCGGCCACATCTCCTCCAAACACACACAGGACCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000252729.7
CDS CCA 90 bp TACCCAGGAAGGGACCTGAGGTCCTGTGTGTGTTTGGAGGAGATGTaGCCGGGGTTCCCTTGGGCTCAGAGTTTGAGAACAGAGGACTTG +
Preference number: 5 (lower is better)
Translates to: YPGRDLRSCVCLEEM*PGFPWAQSLRTEDL
Trigger: CAAGTCCTCTGTTCTCAAACTCTGAGCCCAAGGGAACCCCGGCCACATCTCCTCCAAACACACACAGGACCTCAGGTCCCTTCCTGGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252729.7
ENST00000352529.1
CDS-3UTR CAA 90 bp AAAAAGTCTCTCCCGGCAAGTGAATCGATCCAGACCTGGGAAATGAAGGGGCCCGTGGCCGGGGTTCCCTaGGGCTCAGAGTTTGAGAAC +
Preference number: 5 (lower is better)
Translates to: KKSLPASESIQTWEMKGPVAGVP*GSEFEN
Trigger: GTTCTCAAACTCTGAGCCCAAGGGAACCCCGGCCAC...GGGCCCCTTCATTTCCCAGGTCTGGATCGATTCACTTGCCGGGAGAGACTTTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000252729.7
ENST00000352529.1
CDS GCA 90 bp GATGATACAGAGGCACCCCAAGGCCATGACTGCCAGGCCCAGCACTaGTATCACCGCAGCTGCCAGATTCACCTCTTTCTTTGTGGTTCT +
Preference number: 5 (lower is better)
Translates to: DDTEAPQGHDCQAQH*YHRSCQIHLFLCGS
Trigger: AGAACCACAAAGAAAGAGGTGAATCTGGCAGCTGCGGTGATAGCAGTGCTGGGCCTGGCAGTCATGGCCTTGGGGTGCCTCTGTATCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252729.7
CDS CCA 90 bp GCAAAAAGATCTTGGGGGTACAATGGAGAAGGTCAAAGGGCTCGGTaGTTGCTTAGAGAAGTCTCACGCGTGGCTCTAGGTGGCCCGGTG +
Preference number: 5 (lower is better)
Translates to: AKRSWGYNGEGQRAR*LLREVSRVALGGPV
Trigger: CACCGGGCCACCTAGAGCCACGCGTGAGACTTCTCTAAGCAACCACCGAGCCCTTTGACCTTCTCCATTGTACCCCCAAGATCTTTTTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000252729.7
ENST00000352529.1
CDS-3UTR CAA 90 bp AAAAAGTCTCTCCCGGCAAGTGAATCGATCCAGACCTGGGAAATGAAGGGGCCCTCTGGGGACCCTCGTTaGCAAAGAGCCTCTTCCCAT +
Preference number: 5 (lower is better)
Translates to: KKSLPASESIQTWEMKGPSGDPR*QRASSH
Trigger: ATGGGAAGAGGCTCTTTGCAAACGAGGGTCCCCAGA...GGGCCCCTTCATTTCCCAGGTCTGGATCGATTCACTTGCCGGGAGAGACTTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000252729.7
ENST00000352529.1
CDS-3UTR CAA 90 bp TTCCCATCCCACCCCCAAGCAACCCACATACAGCCACAGAGAAAAACGTATTTAAGGTCCTGTGTGTGTTaGGAGGAGATGTGGCCGGGG +
Preference number: 5 (lower is better)
Translates to: FPSHPQATHIQPQRKTYLRSCVC*EEMWPG
Trigger: CCCCGGCCACATCTCCTCCAAACACACACAGGACCT...TAAATACGTTTTTCTCTGTGGCTGTATGTGGGTTGCTTGGGGGTGGGATGGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000252729.7
ENST00000352529.1
CDS-3UTR CAA 90 bp TCCCACCCCCAAGCAACCCACATACAGCCACAGAGAAAAACGTATTTACAGAGGCCGCCGGTTCTCCTCTaGCAGGAAGAAGTTGGACCA +
Preference number: 5 (lower is better)
Translates to: SHPQATHIQPQRKTYLQRPPVLL*QEEVGP
Trigger: TGGTCCAACTTCTTCCTGCAAGAGGAGAACCGGCGG...CCTCTGTAAATACGTTTTTCTCTGTGGCTGTATGTGGGTTGCTTGGGGGTGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000252729.7
ENST00000352529.1
CDS-3UTR CAA 90 bp TTCCCATCCCACCCCCAAGCAACCCACATACAGCCACAGAGAAAAACGTATTTAGTTGCCCTCAAGAACTaGGCAAAGAAGACGGGGCCC +
Preference number: 5 (lower is better)
Translates to: FPSHPQATHIQPQRKTYLVALKN*AKKTGP
Trigger: GGGCCCCGTCTTCTTTGCCAAGTTCTTGAGGGCAAC...TAAATACGTTTTTCTCTGTGGCTGTATGTGGGTTGCTTGGGGGTGGGATGGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000252729.7
ENST00000352529.1
CDS-3UTR CAA 90 bp TTCCCATCCCACCCCCAAGCAACCCACATACAGCCACAGAGAAAAACGTATTTACCGCCGGTTCTCCTCTaGCAGGAAGAAGTTGGACCA +
Preference number: 5 (lower is better)
Translates to: FPSHPQATHIQPQRKTYLPPVLL*QEEVGP
Trigger: TGGTCCAACTTCTTCCTGCAAGAGGAGAACCGGCGG...TAAATACGTTTTTCTCTGTGGCTGTATGTGGGTTGCTTGGGGGTGGGATGGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000252729.7
ENST00000352529.1
CDS-3UTR CAA 90 bp TTCCCATCCCACCCCCAAGCAACCCACATACAGCCACAGAGAAAAACGTATTTAACTAGGGCTAAGAGTTaGGGGTACCCAGGAAGGGAC +
Preference number: 5 (lower is better)
Translates to: FPSHPQATHIQPQRKTYLTRAKS*GYPGRD
Trigger: GTCCCTTCCTGGGTACCCCAAACTCTTAGCCCTAGT...TAAATACGTTTTTCTCTGTGGCTGTATGTGGGTTGCTTGGGGGTGGGATGGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000252729.7
ENST00000352529.1
CDS-3UTR CAA 90 bp AGAGCCTCTTCCCATCCCACCCCCAAGCAACCCACATACAGCCACAGAGAAAAAATGCGAAAGTCGAGATaGCTTCTGGGGTTCAGAAGA +
Preference number: 5 (lower is better)
Translates to: RASSHPTPKQPTYSHREKMRKSR*LLGFRR
Trigger: TCTTCTGAACCCCAGAAGCAATCTCGACTTTCGCAT...TTTTTCTCTGTGGCTGTATGTGGGTTGCTTGGGGGTGGGATGGGAAGAGGCTCT
51% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000252729.7
ENST00000352529.1
CDS CCA 90 bp ACTCAGTTTCCCCTGGGTATGAAAGAGGGAGAGCCGAGTCCTGTCTaGAATCTCAAATGCGAAAGTCGAGATTGCTTCTGGGGTTCAGAA +
Preference number: 5 (lower is better)
Translates to: TQFPLGMKEGEPSPV*NLKCESRDCFWGSE
Trigger: TTCTGAACCCCAGAAGCAATCTCGACTTTCGCATTTGAGATTCCAGACAGGACTCGGCTCTCCCTCTTTCATACCCAGGGGAAACTGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252729.7
ENST00000352529.1
CDS-3UTR CAA 90 bp ATCCCACCCCCAAGCAACCCACATACAGCCACAGAGAAAAACGTATTTACAGAGAGAGGAGGGTCTAGGTaGCCCTCAAGAACTTGGCAA +
Preference number: 5 (lower is better)
Translates to: IPPPSNPHTATEKNVFTERGGSR*PSRTWQ
Trigger: TTGCCAAGTTCTTGAGGGCAACCTAGACCCTCCTCT...CTCTGTAAATACGTTTTTCTCTGTGGCTGTATGTGGGTTGCTTGGGGGTGGGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000252729.7
ENST00000352529.1
CDS-3UTR CAA 90 bp CTGCAGATGAGTTGTAAAAAGTCTCTCCCGGCAAGTGAATCGATCCAGACCTGGATGCGAAAGTCGAGATaGCTTCTGGGGTTCAGAAGA +
Preference number: 5 (lower is better)
Translates to: LQMSCKKSLPASESIQTWMRKSR*LLGFRR
Trigger: TCTTCTGAACCCCAGAAGCAATCTCGACTTTCGCAT...CCAGGTCTGGATCGATTCACTTGCCGGGAGAGACTTTTTACAACTCATCTGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252729.7
ENST00000352529.1
CDS GCA 90 bp CACCAAGAGCAGCAGGCCTTTCTTTGTGGTTCTCTGAAAGATGCGTaGATTCTCCCCCGTGGTGAAGAATTTAAAATAGGTGCAGTTTGC +
Preference number: 5 (lower is better)
Translates to: HQEQQAFLCGSLKDA*ILPRGEEFKIGAVC
Trigger: GCAAACTGCACCTATTTTAAATTCTTCACCACGGGGGAGAATGCACGCATCTTTCAGAGAACCACAAAGAAAGGCCTGCTGCTCTTGGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000346968.2
CDS GCA 90 bp CTGGGTATGAAAGAGGGAGAGCCGAGTCCTGTCTGGAATCTCAAATaGGAAAGTCGAGATTGCTTCTGGGGTTCAGAAGAGAAAAATGAT +
Preference number: 5 (lower is better)
Translates to: LGMKEGEPSPVWNLK*ESRDCFWGSEEKND
Trigger: ATCATTTTTCTCTTCTGAACCCCAGAAGCAATCTCGACTTTCGCATTTGAGATTCCAGACAGGACTCGGCTCTCCCTCTTTCATACCCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252729.7
ENST00000352529.1
CDS GCA 72 bp TGTCCACGGGCACGTCCGCCTGCCACAGCCGCTTGGTaGACGCCTTCCACAGCCCCAGGTGGGCCGCTTCGC +
Preference number: 6 (lower is better)
Translates to: CPRARPPATAAW*TPSTAPGGPLR
Trigger: GCGAAGCGGCCCACCTGGGGCTGTGGAAGGCGTGCACCAAGCGGCTGTGGCAGGCGGACGTGCCCGTGGACA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252729.7
ENST00000346968.2
ENST00000352529.1
CDS CCA 72 bp CTCACGCGTGGCTCTAGGTGGCCCGGTGCCCCCGCTTaGGACAGAGGGACCCCCAGGGCCAGGAAGGCAGTG +
Preference number: 6 (lower is better)
Translates to: LTRGSRWPGAPA*DRGTPRARKAV
Trigger: CACTGCCTTCCTGGCCCTGGGGGTCCCTCTGTCCCAAGCGGGGGCACCGGGCCACCTAGAGCCACGCGTGAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000252729.7
ENST00000352529.1
CDS CCA 72 bp CACAGCCGCTTGGTGCACGCCTTCCACAGCCCCAGGTaGGCCGCTTCGCACACGGCGCTGCCGTTGGCCTTG +
Preference number: 6 (lower is better)
Translates to: HSRLVHAFHSPR*AASHTALPLAL
Trigger: CAAGGCCAACGGCAGCGCCGTGTGCGAAGCGGCCCACCTGGGGCTGTGGAAGGCGTGCACCAAGCGGCTGTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252729.7
ENST00000346968.2
ENST00000352529.1
CDS GCA 72 bp AGGGTTCAAAGGCCAACCGCGACCCGCAAGAGACGCTaGGCCCCTTCGGGATCAGTCCGTCTCCCTCCCCCG +
Preference number: 6 (lower is better)
Translates to: RVQRPTATRKRR*APSGSVRLPPP
Trigger: CGGGGGAGGGAGACGGACTGATCCCGAAGGGGCGCAGCGTCTCTTGCGGGTCGCGGTTGGCCTTTGAACCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000252729.7
CDS GCA 72 bp TCCGGGCTGACTCTCTGCAGCAGGGCCCTCACGGAATaGCGGAACACCTCCAGGCTCACCAAGAGCAGCAGG +
Preference number: 6 (lower is better)
Translates to: SGLTLCSRALTE*RNTSRLTKSSR
Trigger: CCTGCTGCTCTTGGTGAGCCTGGAGGTGTTCCGGCATTCCGTGAGGGCCCTGCTGCAGAGAGTCAGCCCGGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252729.7
ENST00000346968.2
ENST00000352529.1
CDS TCA 72 bp CTTCGCACACGGCGCTGCCGTTGGCCTTGTAGGTGTTaGGCTCCACCCAGAACTCGGTGCCCACGGACAGCA +
Preference number: 6 (lower is better)
Translates to: LRTRRCRWPCRC*APPRTRCPRTA
Trigger: TGCTGTCCGTGGGCACCGAGTTCTGGGTGGAGCTCAACACCTACAAGGCCAACGGCAGCGCCGTGTGCGAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252729.7
ENST00000346968.2
ENST00000352529.1
CDS CCA 72 bp TCCTCTTGCAGGAAGAAGTTGGACCACATCATCTTATaGCCGGTGGGGTCGGGAAGGGGGAGGAGGCAGAGC +
Preference number: 6 (lower is better)
Translates to: SSCRKKLDHIIL*PVGSGRGRRQS
Trigger: GCTCTGCCTCCTCCCCCTTCCCGACCCCACCGGCCATAAGATGATGTGGTCCAACTTCTTCCTGCAAGAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252729.7
ENST00000352529.1
CDS CAA 90 bp CCTGAGGTCCTGTGTGTGTTTGGAGGAGATGTGGCCGGGGTTCCCTaGGGCTCAGAGTTTGAGAACAGAGGACTTGGGGACCCTCTGGGA +
Preference number: 6 (lower is better)
Translates to: PEVLCVFGGDVAGVP*GSEFENRGLGDPLG
Trigger: TCCCAGAGGGTCCCCAAGTCCTCTGTTCTCAAACTCTGAGCCCAAGGGAACCCCGGCCACATCTCCTCCAAACACACACAGGACCTCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000252729.7
CDS CAA 90 bp AAGAGTTTGGGGTACCCAGGAAGGGACCTGAGGTCCTGTGTGTGTTaGGAGGAGATGTGGCCGGGGTTCCCTTGGGCTCAGAGTTTGAGA +
Preference number: 6 (lower is better)
Translates to: KSLGYPGRDLRSCVC*EEMWPGFPWAQSLR
Trigger: TCTCAAACTCTGAGCCCAAGGGAACCCCGGCCACATCTCCTCCAAACACACACAGGACCTCAGGTCCCTTCCTGGGTACCCCAAACTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252729.7
ENST00000352529.1
CDS CCA 72 bp AGGGACCTGAGGTCCTGTGTGTGTTTGGAGGAGATGTaGCCGGGGTTCCCTTGGGCTCAGAGTTTGAGAACA +
Preference number: 6 (lower is better)
Translates to: RDLRSCVCLEEM*PGFPWAQSLRT
Trigger: TGTTCTCAAACTCTGAGCCCAAGGGAACCCCGGCCACATCTCCTCCAAACACACACAGGACCTCAGGTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252729.7
ENST00000352529.1
CDS CAA 72 bp CTGTGTGTGTTTGGAGGAGATGTGGCCGGGGTTCCCTaGGGCTCAGAGTTTGAGAACAGAGGACTTGGGGAC +
Preference number: 6 (lower is better)
Translates to: LCVFGGDVAGVP*GSEFENRGLGD
Trigger: GTCCCCAAGTCCTCTGTTCTCAAACTCTGAGCCCAAGGGAACCCCGGCCACATCTCCTCCAAACACACACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000252729.7
CDS CAA 72 bp GGGTTCCCTTGGGCTCAGAGTTTGAGAACAGAGGACTaGGGGACCCTCTGGGATTCGGAAAAGGAAGACCTG +
Preference number: 6 (lower is better)
Translates to: GFPWAQSLRTED*GTLWDSEKEDL
Trigger: CAGGTCTTCCTTTTCCGAATCCCAGAGGGTCCCCAAGTCCTCTGTTCTCAAACTCTGAGCCCAAGGGAACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000252729.7
CDS GCA 72 bp GCCAAAGCAGACGGCTCCAACTCGGAGCAGGAACTCTaGACCTTTACTGAGCACCATGATGATACAGAGGCA +
Preference number: 6 (lower is better)
Translates to: AKADGSNSEQEL*TFTEHHDDTEA
Trigger: TGCCTCTGTATCATCATGGTGCTCAGTAAAGGTGCAGAGTTCCTGCTCCGAGTTGGAGCCGTCTGCTTTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252729.7
CDS CCA 72 bp TCTTGGGGGTACAATGGAGAAGGTCAAAGGGCTCGGTaGTTGCTTAGAGAAGTCTCACGCGTGGCTCTAGGT +
Preference number: 6 (lower is better)
Translates to: SWGYNGEGQRAR*LLREVSRVALG
Trigger: ACCTAGAGCCACGCGTGAGACTTCTCTAAGCAACCACCGAGCCCTTTGACCTTCTCCATTGTACCCCCAAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252729.7
ENST00000352529.1
CDS CCA 72 bp CCCCTGGGTATGAAAGAGGGAGAGCCGAGTCCTGTCTaGAATCTCAAATGCGAAAGTCGAGATTGCTTCTGG +
Preference number: 6 (lower is better)
Translates to: PLGMKEGEPSPV*NLKCESRDCFW
Trigger: CCAGAAGCAATCTCGACTTTCGCATTTGAGATTCCAGACAGGACTCGGCTCTCCCTCTTTCATACCCAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252729.7
ENST00000352529.1
CDS TCA 72 bp CTCACCAAGAGCAGCAGGCCTTTCTTTGTGGTTCTCTaGAAGATGCGTGCATTCTCCCCCGTGGTGAAGAAT +
Preference number: 6 (lower is better)
Translates to: LTKSSRPFFVVL*KMRAFSPVVKN
Trigger: ATTCTTCACCACGGGGGAGAATGCACGCATCTTTCAGAGAACCACAAAGAAAGGCCTGCTGCTCTTGGTGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000346968.2
CDS TCA 72 bp GCAGCTGCCAGATTCACCTCTTTCTTTGTGGTTCTCTaGAAGATGCGTGCATTCTCCCCCGTGGTGAAGAAT +
Preference number: 6 (lower is better)
Translates to: AAARFTSFFVVL*KMRAFSPVVKN
Trigger: ATTCTTCACCACGGGGGAGAATGCACGCATCTTTCAGAGAACCACAAAGAAAGAGGTGAATCTGGCAGCTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000252729.7
CDS GCA 72 bp AAAGAGGGAGAGCCGAGTCCTGTCTGGAATCTCAAATaGGAAAGTCGAGATTGCTTCTGGGGTTCAGAAGAG +
Preference number: 6 (lower is better)
Translates to: KEGEPSPVWNLK*ESRDCFWGSEE
Trigger: CTCTTCTGAACCCCAGAAGCAATCTCGACTTTCGCATTTGAGATTCCAGACAGGACTCGGCTCTCCCTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252729.7
ENST00000352529.1
CDS GCA 72 bp CAGCAGGCCTTTCTTTGTGGTTCTCTGAAAGATGCGTaGATTCTCCCCCGTGGTGAAGAATTTAAAATAGGT +
Preference number: 6 (lower is better)
Translates to: QQAFLCGSLKDA*ILPRGEEFKIG
Trigger: ACCTATTTTAAATTCTTCACCACGGGGGAGAATGCACGCATCTTTCAGAGAACCACAAAGAAAGGCCTGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000346968.2