RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CACNG5 (Homo sapiens)

Ensembl gene IDs: ENSG00000075429

Ensembl transcript IDs: ENST00000307139.4, ENST00000533854.6, ENST00000673855.1

Found 589 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CGGCTGCCTGACACACCGCCTCTCCAAGGCTGCGCACACCAGACGTaGAGCTTTCTGGACTACGTGCTGGAGCCCACGTGTCGCCACCAT +
Preference number: 1 (lower is better)
Translates to: RLPDTPPLQGCAHQT*SFLDYVLEPTCRHH
Trigger: ATGGTGGCGACACGTGGGCTCCAGCACGTAGTCCAGAAAGCTGCACGTCTGGTGTGCGCAGCCTTGGAGAGGCGGTGTGTCAGGCAGCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR GCA 90 bp TTCATTGCGGCAGCCCGGCTGCCTGACACACCGCCTCTCCAAGGCTaGGCACACCAGACGTGCAGCTTTCTGGACTACGTGCTGGAGCCC +
Preference number: 1 (lower is better)
Translates to: FIAAARLPDTPPLQG*AHQTCSFLDYVLEP
Trigger: GGGCTCCAGCACGTAGTCCAGAAAGCTGCACGTCTGGTGTGCGCAGCCTTGGAGAGGCGGTGTGTCAGGCAGCCGGGCTGCCGCAATGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR TCA 90 bp CCTTGGGGAAAGGGCTCAGAGGCAGAAGGGCTGGGCATGAGCCCATaGATTTGGCGTCTTGCCCCAGGCACAGCCTTGTCGGAGGAGGTG +
Preference number: 1 (lower is better)
Translates to: PWGKGSEAEGLGMSP*IWRLAPGTALSEEV
Trigger: CACCTCCTCCGACAAGGCTGTGCCTGGGGCAAGACGCCAAATTCATGGGCTCATGCCCAGCCCTTCTGCCTCTGAGCCCTTTCCCCAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR TCA 90 bp ACTGGCTCCAGCGTACCACCCTCCACCCCCTGTAGTGGTGACCACTaGGCCTCGTCTCTTCTATGGCACACTGGAGCAGCCACTGCTACC +
Preference number: 1 (lower is better)
Translates to: TGSSVPPSTPCSGDH*ASSLLWHTGAATAT
Trigger: GGTAGCAGTGGCTGCTCCAGTGTGCCATAGAAGAGACGAGGCTCAGTGGTCACCACTACAGGGGGTGGAGGGTGGTACGCTGGAGCCAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR TCA 90 bp TACCAGCTCCTTGGGGAAAGGGCTCAGAGGCAGAAGGGCTGGGCATaGGCCCATGAATTTGGCGTCTTGCCCCAGGCACAGCCTTGTCGG +
Preference number: 1 (lower is better)
Translates to: YQLLGERAQRQKGWA*AHEFGVLPQAQPCR
Trigger: CCGACAAGGCTGTGCCTGGGGCAAGACGCCAAATTCATGGGCTCATGCCCAGCCCTTCTGCCTCTGAGCCCTTTCCCCAAGGAGCTGGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR CCA 90 bp ACACACCGCCTCTCCAAGGCTGCGCACACCAGACGTGCAGCTTTCTaGACTACGTGCTGGAGCCCACGTGTCGCCACCATGGCTTTCTGT +
Preference number: 1 (lower is better)
Translates to: THRLSKAAHTRRAAF*TTCWSPRVATMAFC
Trigger: ACAGAAAGCCATGGTGGCGACACGTGGGCTCCAGCACGTAGTCCAGAAAGCTGCACGTCTGGTGTGCGCAGCCTTGGAGAGGCGGTGTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR CCA 90 bp GGCGGGTCTCACCTGCCATGGCACACCCACTGGCCATTTGCTCCATaGTGCCCTGGGAGTCAGCCAGGAAAATGGAATCTGGAGGCCAGA +
Preference number: 1 (lower is better)
Translates to: GGSHLPWHTHWPFAP*CPGSQPGKWNLEAR
Trigger: TCTGGCCTCCAGATTCCATTTTCCTGGCTGACTCCCAGGGCACCATGGAGCAAATGGCCAGTGGGTGTGCCATGGCAGGTGAGACCCGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533854.6
ENST00000673855.1
3UTR CCA 90 bp AGCAGTGAGCAGAGTCCTTGGCAGGGCCTGAGAGGGGTGGCGGGATaGTGTTTACGAGGACACAGGACAACAGGTGTCAAGAACCCTGGC +
Preference number: 1 (lower is better)
Translates to: SSEQSPWQGLRGVAG*CLRGHRTTGVKNPG
Trigger: GCCAGGGTTCTTGACACCTGTTGTCCTGTGTCCTCGTAAACACCATCCCGCCACCCCTCTCAGGCCCTGCCAAGGACTCTGCTCACTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533854.6
ENST00000673855.1
3UTR TCA 90 bp CTCGTCTCTTCTATGGCACACTGGAGCAGCCACTGCTACCATGGATaGACCCACACTCACAGTGCTAGCCGGGCCTCAGGCACAGGTGCA +
Preference number: 1 (lower is better)
Translates to: LVSSMAHWSSHCYHG*THTHSASRASGTGA
Trigger: TGCACCTGTGCCTGAGGCCCGGCTAGCACTGTGAGTGTGGGTTCATCCATGGTAGCAGTGGCTGCTCCAGTGTGCCATAGAAGAGACGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR TCA 90 bp CCACTGAGGAAGGATGTGCAGGATCCTCCCAAGGGGGTGACAGATTaGAAGGAGTCCTTGGAGGTCGGGGAGAGCAGTCAACGCATGGGG +
Preference number: 1 (lower is better)
Translates to: PLRKDVQDPPKGVTD*KESLEVGESSQRMG
Trigger: CCCCATGCGTTGACTGCTCTCCCCGACCTCCAAGGACTCCTTTCAATCTGTCACCCCCTTGGGAGGATCCTGCACATCCTTCCTCAGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000533854.6
ENST00000673855.1
3UTR GCA 90 bp CTCTCCAAGGCTGCGCACACCAGACGTGCAGCTTTCTGGACTACGTaGTGGAGCCCACGTGTCGCCACCATGGCTTTCTGTTCTCAGAAC +
Preference number: 1 (lower is better)
Translates to: LSKAAHTRRAAFWTT*WSPRVATMAFCSQN
Trigger: GTTCTGAGAACAGAAAGCCATGGTGGCGACACGTGGGCTCCAGCACGTAGTCCAGAAAGCTGCACGTCTGGTGTGCGCAGCCTTGGAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR GCA 90 bp TATTTAAGCCACTCAGTCTGTGGTAGTTCATTGCGGCAGCCCGGCTaGCTGACACACCGCCTCTCCAAGGCTGCGCACACCAGACGTGCA +
Preference number: 1 (lower is better)
Translates to: YLSHSVCGSSLRQPG*LTHRLSKAAHTRRA
Trigger: TGCACGTCTGGTGTGCGCAGCCTTGGAGAGGCGGTGTGTCAGGCAGCCGGGCTGCCGCAATGAACTACCACAGACTGAGTGGCTTAAATA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR GCA 90 bp TTGAATGTGAATGGCCAGGCCAGTTGGCAAGTGCACGAGTCCAGCTaGATCTGTGTAAGGAGCTTGGCATCTCAGAGCTGGCCCTGGCCC +
Preference number: 1 (lower is better)
Translates to: LNVNGQASWQVHESS*ICVRSLASQSWPWP
Trigger: GGGCCAGGGCCAGCTCTGAGATGCCAAGCTCCTTACACAGATGCAGCTGGACTCGTGCACTTGCCAACTGGCCTGGCCATTCACATTCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR GCA 90 bp CTCATACCCAAAATCCAGGCAGCTGGTGAAGGAACAGAGCCCAGGTaGCAATTTGCTCAGGCCTTAGGTGGAATGTGGCTCCCCCGGCCT +
Preference number: 1 (lower is better)
Translates to: LIPKIQAAGEGTEPR*QFAQALGGMWLPRP
Trigger: AGGCCGGGGGAGCCACATTCCACCTAAGGCCTGAGCAAATTGGCACCTGGGCTCTGTTCCTTCACCAGCTGCCTGGATTTTGGGTATGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR CCA 90 bp TCCAAGGCTGCGCACACCAGACGTGCAGCTTTCTGGACTACGTGCTaGAGCCCACGTGTCGCCACCATGGCTTTCTGTTCTCAGAACCTA +
Preference number: 1 (lower is better)
Translates to: SKAAHTRRAAFWTTC*SPRVATMAFCSQNL
Trigger: TAGGTTCTGAGAACAGAAAGCCATGGTGGCGACACGTGGGCTCCAGCACGTAGTCCAGAAAGCTGCACGTCTGGTGTGCGCAGCCTTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR CCA 90 bp GCTAGAGGGGCACCTGCCCAGTTCCTATTCACTCATCTGCATGCCTaGAACCCAAAGAGCAAAAGCAGCCCTGGTGAGGGCTCTGACTGG +
Preference number: 1 (lower is better)
Translates to: ARGAPAQFLFTHLHA*NPKSKSSPGEGSDW
Trigger: CCAGTCAGAGCCCTCACCAGGGCTGCTTTTGCTCTTTGGGTTCCAGGCATGCAGATGAGTGAATAGGAACTGGGCAGGTGCCCCTCTAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR CCA 90 bp TCAAGAACCCTGGCACCTACACCGCTGGACTTTGGATTTCTAGCCTaGCAGCCACTGCCATCCCCTCCCCATTGGATTCCCATGCAACCC +
Preference number: 1 (lower is better)
Translates to: SRTLAPTPLDFGFLA*QPLPSPPHWIPMQP
Trigger: GGGTTGCATGGGAATCCAATGGGGAGGGGATGGCAGTGGCTGCCAGGCTAGAAATCCAAAGTCCAGCGGTGTAGGTGCCAGGGTTCTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000533854.6
ENST00000673855.1
3UTR TCA 90 bp GGGGGCATGGCTTGCAGTGGCTTCTGTGGACTTACGGAGGGTAATTaGAACCCTCCTGGCTCCGGTTTCCCACCAGAAGAATGGGTGTCA +
Preference number: 1 (lower is better)
Translates to: GGMACSGFCGLTEGN*NPPGSGFPPEEWVS
Trigger: TGACACCCATTCTTCTGGTGGGAAACCGGAGCCAGGAGGGTTTCAATTACCCTCCGTAAGTCCACAGAAGCCACTGCAAGCCATGCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR GCA 90 bp ACGTGGATGCTAGAGGGGCACCTGCCCAGTTCCTATTCACTCATCTaGATGCCTGGAACCCAAAGAGCAAAAGCAGCCCTGGTGAGGGCT +
Preference number: 1 (lower is better)
Translates to: TWMLEGHLPSSYSLI*MPGTQRAKAALVRA
Trigger: AGCCCTCACCAGGGCTGCTTTTGCTCTTTGGGTTCCAGGCATGCAGATGAGTGAATAGGAACTGGGCAGGTGCCCCTCTAGCATCCACGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR CCA 90 bp GGAATGTGGCTCCCCCGGCCTCCGCTGTCCTTTCTCCACTTACAATaGTTAGTTTTACATGTCAGTGTGGCTGGGCCATGGTGCTGCCCA +
Preference number: 1 (lower is better)
Translates to: GMWLPRPPLSFLHLQ*LVLHVSVAGPWCCP
Trigger: TGGGCAGCACCATGGCCCAGCCACACTGACATGTAAAACTAACCATTGTAAGTGGAGAAAGGACAGCGGAGGCCGGGGGAGCCACATTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR CCA 90 bp CACAGCCTGTGTCAGGGAGGGAAGAGCATGGACAGGTGTGTCATGTaGAGGGACAGGGGTGACAAGGAGAAAGGAGTTCAGAAGGAACAC +
Preference number: 1 (lower is better)
Translates to: HSLCQGGKSMDRCVM*RDRGDKEKGVQKEH
Trigger: GTGTTCCTTCTGAACTCCTTTCTCCTTGTCACCCCTGTCCCTCCACATGACACACCTGTCCATGCTCTTCCCTCCCTGACACAGGCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR CCA 90 bp GGAGGGGAGTGGGCTTGGAAACCATTTAGGCCAAGCCCCTCAGAGTaGAAGGGTGTTGCCCAAGGATTCGTGGTGAATGAGTGGCTGAAT +
Preference number: 1 (lower is better)
Translates to: GGEWAWKPFRPSPSE*KGVAQGFVVNEWLN
Trigger: ATTCAGCCACTCATTCACCACGAATCCTTGGGCAACACCCTTCCACTCTGAGGGGCTTGGCCTAAATGGTTTCCAAGCCCACTCCCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR GCA 90 bp AGAGCAGCTGGATTATTCCAAGTCTGCCTTTGTTTGCACTCAAGCTaGACCAGGTGTCCTCAAATCCAGCTCCCACTCCCAGGCAGCCTC +
Preference number: 1 (lower is better)
Translates to: RAAGLFQVCLCLHSS*TRCPQIQLPLPGSL
Trigger: GAGGCTGCCTGGGAGTGGGAGCTGGATTTGAGGACACCTGGTGCAGCTTGAGTGCAAACAAAGGCAGACTTGGAATAATCCAGCTGCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR GCA 90 bp TGTTGCCATCTTGCTACCCACTCGTGGATAAAGGCAGCAGAATTCTaGCTTCCTCCAACTGTCTCCCCACTGCTACTGCCAGCCATGTGC +
Preference number: 1 (lower is better)
Translates to: CCHLATHSWIKAAEF*LPPTVSPLLLPAMC
Trigger: GCACATGGCTGGCAGTAGCAGTGGGGAGACAGTTGGAGGAAGGCAGAATTCTGCTGCCTTTATCCACGAGTGGGTAGCAAGATGGCAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR CCA 90 bp TTCGGCCAGATGGTGCAGATCTTGAATGTGAATGGCCAGGCCAGTTaGCAAGTGCACGAGTCCAGCTGCATCTGTGTAAGGAGCTTGGCA +
Preference number: 1 (lower is better)
Translates to: FGQMVQILNVNGQAS*QVHESSCICVRSLA
Trigger: TGCCAAGCTCCTTACACAGATGCAGCTGGACTCGTGCACTTGCCAACTGGCCTGGCCATTCACATTCAAGATCTGCACCATCTGGCCGAA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR CCA 90 bp TGGAAGGGTGTTGCCCAAGGATTCGTGGTGAATGAGTGGCTGAATTaGGACCAGAACTGGCTTCTCTTACCCTTCTCCTCCACCCTGCTG +
Preference number: 1 (lower is better)
Translates to: WKGVAQGFVVNEWLN*DQNWLLLPFSSTLL
Trigger: CAGCAGGGTGGAGGAGAAGGGTAAGAGAAGCCAGTTCTGGTCCCAATTCAGCCACTCATTCACCACGAATCCTTGGGCAACACCCTTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR CCA 90 bp CCCTCAGAGTGGAAGGGTGTTGCCCAAGGATTCGTGGTGAATGAGTaGCTGAATTGGGACCAGAACTGGCTTCTCTTACCCTTCTCCTCC +
Preference number: 1 (lower is better)
Translates to: PSEWKGVAQGFVVNE*LNWDQNWLLLPFSS
Trigger: GGAGGAGAAGGGTAAGAGAAGCCAGTTCTGGTCCCAATTCAGCCACTCATTCACCACGAATCCTTGGGCAACACCCTTCCACTCTGAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR CCA 90 bp CACATACAAAAGCAACAGAGAGCCTCCCACAGGAGGCTGAGTCATTaGAGTTGTGGGTGGGTGGGAGGGGAGTGGGCTTGGAAACCATTT +
Preference number: 1 (lower is better)
Translates to: HIQKQQRASHRRLSH*SCGWVGGEWAWKPF
Trigger: AAATGGTTTCCAAGCCCACTCCCCTCCCACCCACCCACAACTCCAATGACTCAGCCTCCTGTGGGAGGCTCTCTGTTGCTTTTGTATGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR CCA 90 bp ATCATCCCTGCTTGCATCCCTGCTTGCTTGGCCCTGACAGTGGGCTaGAGAACACGTTGGCTCCAGAATGTTCTCTATCCTCTTTCCAGG +
Preference number: 1 (lower is better)
Translates to: IIPACIPACLALTVG*RTRWLQNVLYPLSR
Trigger: CCTGGAAAGAGGATAGAGAACATTCTGGAGCCAACGTGTTCTCCAGCCCACTGTCAGGGCCAAGCAAGCAGGGATGCAAGCAGGGATGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR GCA 90 bp AGCCACTGTCTGACTCCAACTGCCTGGGAGATCCTGAGTGAGAACTaGCTTGCTGAGCCCAGCCAACCCCTAAAGCTGTCAGAAATAATC +
Preference number: 1 (lower is better)
Translates to: SHCLTPTAWEILSEN*LAEPSQPLKLSEII
Trigger: GATTATTTCTGACAGCTTTAGGGGTTGGCTGGGCTCAGCAAGGCAGTTCTCACTCAGGATCTCCCAGGCAGTTGGAGTCAGACAGTGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR CCA 90 bp ATCAGAGTCACCTTTCGGCCAGATGGTGCAGATCTTGAATGTGAATaGCCAGGCCAGTTGGCAAGTGCACGAGTCCAGCTGCATCTGTGT +
Preference number: 1 (lower is better)
Translates to: IRVTFRPDGADLECE*PGQLASARVQLHLC
Trigger: ACACAGATGCAGCTGGACTCGTGCACTTGCCAACTGGCCTGGCCATTCACATTCAAGATCTGCACCATCTGGCCGAAAGGTGACTCTGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR GCA 90 bp AACCCTCCTGGCTCCGGTTTCCCACCAGAAGAATGGGTGTCACACTaGCTGGTCTTCTGGAAAAATCTGATTTGCCCACATCTGTCCTAC +
Preference number: 1 (lower is better)
Translates to: NPPGSGFPPEEWVSH*LVFWKNLICPHLSY
Trigger: GTAGGACAGATGTGGGCAAATCAGATTTTTCCAGAAGACCAGGCAGTGTGACACCCATTCTTCTGGTGGGAAACCGGAGCCAGGAGGGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR CCA 90 bp TTCACTGAGTGTGGGGAGAAAGTCAAGACTTGGAGAGCTGCCAATTaGCCCTCATACCCAAAATCCAGGCAGCTGGTGAAGGAACAGAGC +
Preference number: 1 (lower is better)
Translates to: FTECGEKVKTWRAAN*PSYPKSRQLVKEQS
Trigger: GCTCTGTTCCTTCACCAGCTGCCTGGATTTTGGGTATGAGGGCCAATTGGCAGCTCTCCAAGTCTTGACTTTCTCCCCACACTCAGTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR TCA 90 bp CACCAGAAGAATGGGTGTCACACTGCCTGGTCTTCTGGAAAAATCTaGTTTGCCCACATCTGTCCTACACCCAGGAAGCAGACACTCCTC +
Preference number: 1 (lower is better)
Translates to: HQKNGCHTAWSSGKI*FAHICPTPRKQTLL
Trigger: GAGGAGTGTCTGCTTCCTGGGTGTAGGACAGATGTGGGCAAATCAGATTTTTCCAGAAGACCAGGCAGTGTGACACCCATTCTTCTGGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR TCA 90 bp AGCCAAGGACAGAGGCCTCAGAAGAAACCAATCCTGCCAACACCGTaGTCTTGGACTCCGGTACCCAGAACTGTAGGAAAATTCATGTGC +
Preference number: 1 (lower is better)
Translates to: SQGQRPQKKPILPTP*SWTPVPRTVGKFMC
Trigger: GCACATGAATTTTCCTACAGTTCTGGGTACCGGAGTCCAAGATCACGGTGTTGGCAGGATTGGTTTCTTCTGAGGCCTCTGTCCTTGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR TCA 90 bp TCTAAGGATTTATCATCCCTGCTTGCATCCCTGCTTGCTTGGCCCTaGCAGTGGGCTGGAGAACACGTTGGCTCCAGAATGTTCTCTATC +
Preference number: 1 (lower is better)
Translates to: SKDLSSLLASLLAWP*QWAGEHVGSRMFSI
Trigger: GATAGAGAACATTCTGGAGCCAACGTGTTCTCCAGCCCACTGTCAGGGCCAAGCAAGCAGGGATGCAAGCAGGGATGATAAATCCTTAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR GCA 90 bp ATGTTCACAGGCAGCCTTCGGAGAGCAGCTGGATTATTCCAAGTCTaGCTTTGTTTGCACTCAAGCTGCACCAGGTGTCCTCAAATCCAG +
Preference number: 1 (lower is better)
Translates to: MFTGSLRRAAGLFQV*LCLHSSCTRCPQIQ
Trigger: CTGGATTTGAGGACACCTGGTGCAGCTTGAGTGCAAACAAAGGCAGACTTGGAATAATCCAGCTGCTCTCCGAAGGCTGCCTGTGAACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR GCA 90 bp TCAGAGCCCGAGACTATGAGATCATTTCTAAGGATTTATCATCCCTaGTTGCATCCCTGCTTGCTTGGCCCTGACAGTGGGCTGGAGAAC +
Preference number: 1 (lower is better)
Translates to: SEPETMRSFLRIYHP*LHPCLLGPDSGLEN
Trigger: GTTCTCCAGCCCACTGTCAGGGCCAAGCAAGCAGGGATGCAAGCAGGGATGATAAATCCTTAGAAATGATCTCATAGTCTCGGGCTCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR TCA 90 bp TGGGACCAGAACTGGCTTCTCTTACCCTTCTCCTCCACCCTGCTGTaGGACAAATGGAAGAATCCAGCAACAAAATACCTGTCATGGGCT +
Preference number: 1 (lower is better)
Translates to: WDQNWLLLPFSSTLL*DKWKNPATKYLSWA
Trigger: AGCCCATGACAGGTATTTTGTTGCTGGATTCTTCCATTTGTCTCACAGCAGGGTGGAGGAGAAGGGTAAGAGAAGCCAGTTCTGGTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR GCA 90 bp ACTATGAGATCATTTCTAAGGATTTATCATCCCTGCTTGCATCCCTaGTTGCTTGGCCCTGACAGTGGGCTGGAGAACACGTTGGCTCCA +
Preference number: 1 (lower is better)
Translates to: TMRSFLRIYHPCLHP*LLGPDSGLENTLAP
Trigger: TGGAGCCAACGTGTTCTCCAGCCCACTGTCAGGGCCAAGCAAGCAGGGATGCAAGCAGGGATGATAAATCCTTAGAAATGATCTCATAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR TCA 90 bp TGGAGGGACAGGGGTGACAAGGAGAAAGGAGTTCAGAAGGAACACTaGCAGCTTGACATGTCTAAGTCAGCCAGACCTCTATATCAGAGT +
Preference number: 1 (lower is better)
Translates to: WRDRGDKEKGVQKEH*QLDMSKSARPLYQS
Trigger: ACTCTGATATAGAGGTCTGGCTGACTTAGACATGTCAAGCTGTCAGTGTTCCTTCTGAACTCCTTTCTCCTTGTCACCCCTGTCCCTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR TCA 90 bp GAAGGGAGAGTTACTCAAACATTAAGGAGGGGTGCCCCCTACATGTaGTTCTCTAGGGACATCACTGATAAGCCTGTGGCAACCTATGGA +
Preference number: 1 (lower is better)
Translates to: EGRVTQTLRRGAPYM*FSRDITDKPVATYG
Trigger: TCCATAGGTTGCCACAGGCTTATCAGTGATGTCCCTAGAGAATCACATGTAGGGGGCACCCCTCCTTAATGTTTGAGTAACTCTCCCTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR TCA 90 bp CAGGTTAACTTCCAAGTGTCACACGAGCATATGAAAGTGGTTCACTaGGTGTGGGGAGAAAGTCAAGACTTGGAGAGCTGCCAATTGGCC +
Preference number: 1 (lower is better)
Translates to: QVNFQVSHEHMKVVH*VWGESQDLESCQLA
Trigger: GGCCAATTGGCAGCTCTCCAAGTCTTGACTTTCTCCCCACACTCAGTGAACCACTTTCATATGCTCGTGTGACACTTGGAAGTTAACCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR TCA 90 bp AGGGCCATACATATTAGGATGTCTTCAGCCATTAACACCTCTTTGTaGCTTCATCAGTGTGGCCTCAGAGCCACCCTTAGTCCCTTAGTG +
Preference number: 1 (lower is better)
Translates to: RAIHIRMSSAINTSL*LHQCGLRATLSPLV
Trigger: CACTAAGGGACTAAGGGTGGCTCTGAGGCCACACTGATGAAGTCACAAAGAGGTGTTAATGGCTGAAGACATCCTAATATGTATGGCCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR TCA 90 bp TTCAATTTATCCAGAACAAGAGTGTGGCGAGGTTCCACCACGGGCTaGCCACAGTTAGGAAAATCCAGAGTTTTCCTGGAGCCATTTCCA +
Preference number: 1 (lower is better)
Translates to: FNLSRTRVWRGSTTG*PQLGKSRVFLEPFP
Trigger: TGGAAATGGCTCCAGGAAAACTCTGGATTTTCCTAACTGTGGTCAGCCCGTGGTGGAACCTCGCCACACTCTTGTTCTGGATAAATTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR GCA 90 bp AGCTGTTGCATCTTGATAGGATGTTTGGAATCACTGTTGCCATCTTaGTACCCACTCGTGGATAAAGGCAGCAGAATTCTGCCTTCCTCC +
Preference number: 1 (lower is better)
Translates to: SCCILIGCLESLLPS*YPLVDKGSRILPSS
Trigger: GGAGGAAGGCAGAATTCTGCTGCCTTTATCCACGAGTGGGTAGCAAGATGGCAACAGTGATTCCAAACATCCTATCAAGATGCAACAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR TCA 90 bp CTGTGTTCCAAAGGCAGGTTAACTTCCAAGTGTCACACGAGCATATaGAAGTGGTTCACTGAGTGTGGGGAGAAAGTCAAGACTTGGAGA +
Preference number: 1 (lower is better)
Translates to: LCSKGRLTSKCHTSI*KWFTECGEKVKTWR
Trigger: TCTCCAAGTCTTGACTTTCTCCCCACACTCAGTGAACCACTTTCATATGCTCGTGTGACACTTGGAAGTTAACCTGCCTTTGGAACACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR TCA 90 bp TTAAGAAGAGACCGTGTGCAAAGATGTTCTAGTGACAACCTTAGCTaGAGTCTCAGTGGATGCAATTGCCACACCAATGAGCAGGGAAGC +
Preference number: 1 (lower is better)
Translates to: LRRDRVQRCSSDNLS*SLSGCNCHTNEQGS
Trigger: GCTTCCCTGCTCATTGGTGTGGCAATTGCATCCACTGAGACTTCAGCTAAGGTTGTCACTAGAACATCTTTGCACACGGTCTCTTCTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR CCA 90 bp TTAGGTGGTTTAGACAGATGTCTACAAGATTCCATCTTAGGGCCTTaGTCCGGAAATATTACCCTTGTAAGGGGACAGTATCCCCAGGAC +
Preference number: 1 (lower is better)
Translates to: LGGLDRCLQDSILGP*SGNITLVRGQYPQD
Trigger: GTCCTGGGGATACTGTCCCCTTACAAGGGTAATATTTCCGGACCAAGGCCCTAAGATGGAATCTTGTAGACATCTGTCTAAACCACCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR TCA 90 bp AGCAGCTCAGCATCAGGGCCAGTGAAGACCGAACCTAGTGATGTCTaGGTCCACAATCAACTTGTATTTAGGAGTGGATTCTACTTTTTC +
Preference number: 1 (lower is better)
Translates to: SSSASGPVKTEPSDV*VHNQLVFRSGFYFF
Trigger: GAAAAAGTAGAATCCACTCCTAAATACAAGTTGATTGTGGACTCAGACATCACTAGGTTCGGTCTTCACTGGCCCTGATGCTGAGCTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR GCA 90 bp AAACATGTTCCATGGCCAAACTTGTGTCATGAGTCTTTCTCCAGTTaGTTCAATTTATCCAGAACAAGAGTGTGGCGAGGTTCCACCACG +
Preference number: 1 (lower is better)
Translates to: KHVPWPNLCHESFSS*FNLSRTRVWRGSTT
Trigger: CGTGGTGGAACCTCGCCACACTCTTGTTCTGGATAAATTGAAGCAACTGGAGAAAGACTCATGACACAAGTTTGGCCATGGAACATGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR TCA 90 bp CCTAACCACACACGCCAAACATGTTCCATGGCCAAACTTGTGTCATaGGTCTTTCTCCAGTTGCTTCAATTTATCCAGAACAAGAGTGTG +
Preference number: 1 (lower is better)
Translates to: PNHTRQTCSMAKLVS*VFLQLLQFIQNKSV
Trigger: CACACTCTTGTTCTGGATAAATTGAAGCAACTGGAGAAAGACTCATGACACAAGTTTGGCCATGGAACATGTTTGGCGTGTGTGGTTAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR CCA 90 bp GTCCTTTCTCCACTTACAATGGTTAGTTTTACATGTCAGTGTGGCTaGGCCATGGTGCTGCCCAAATATTTGGCCAAACATTTTTCTAAC +
Preference number: 1 (lower is better)
Translates to: VLSPLTMVSFTCQCG*AMVLPKYLAKHFSN
Trigger: GTTAGAAAAATGTTTGGCCAAATATTTGGGCAGCACCATGGCCCAGCCACACTGACATGTAAAACTAACCATTGTAAGTGGAGAAAGGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR GCA 90 bp TCCACAATCAACTTGTATTTAGGAGTGGATTCTACTTTTTCCAGGTaGACCAAAAACAAGCCTGGCACAGTGACAGAGAAAGAGTGTTCT +
Preference number: 1 (lower is better)
Translates to: STINLYLGVDSTFSR*TKNKPGTVTEKECS
Trigger: AGAACACTCTTTCTCTGTCACTGTGCCAGGCTTGTTTTTGGTGCACCTGGAAAAAGTAGAATCCACTCCTAAATACAAGTTGATTGTGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR CAA 90 bp GCCAGTTGGCAAGTGCACGAGTCCAGCTGCATCTGTGTAAGGAGCTaGGCATCTCAGAGCTGGCCCTGGCCCAGGGCCATGAAGTTGGGG +
Preference number: 2 (lower is better)
Translates to: ASWQVHESSCICVRS*ASQSWPWPRAMKLG
Trigger: CCCCAACTTCATGGCCCTGGGCCAGGGCCAGCTCTGAGATGCCAAGCTCCTTACACAGATGCAGCTGGACTCGTGCACTTGCCAACTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR-3UTR TCA 90 bp CCTACACCGCTGGACTTTGGATTTCTAGCCTGGCAGCCACTGCCATCCCCTCCCCTGGAGCCACTGCTGTaGTTGGCACTCACATGGGCG +
Preference number: 2 (lower is better)
Translates to: PTPLDFGFLAWQPLPSPPLEPLL*LALTWA
Trigger: CGCCCATGTGAGTGCCAATCACAGCAGTGGCTCCAG...GGGAGGGGATGGCAGTGGCTGCCAGGCTAGAAATCCAAAGTCCAGCGGTGTAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR CAA 90 bp CCCCTGAGCAGCCAGGATTTCTGCCAGGAGACTGCAAGTTTGGACTaGAACTGCAAGTCCTCACCGGGTCTCCAGCCCAACCAGCCTCTG +
Preference number: 2 (lower is better)
Translates to: PLSSQDFCQETASLD*NCKSSPGLQPNQPL
Trigger: CAGAGGCTGGTTGGGCTGGAGACCCGGTGAGGACTTGCAGTTCAAGTCCAAACTTGCAGTCTCCTGGCAGAAATCCTGGCTGCTCAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR-3UTR CCA 90 bp CAAGGGGGTGACAGATTGAAAGGAGTCCTTGGAGGTCGGGGAGAGCAGTCAACGTCTCAGAGCTGGCCCTaGCCCAGGGCCATGAAGTTG +
Preference number: 2 (lower is better)
Translates to: QGGDRLKGVLGGRGEQSTSQSWP*PRAMKL
Trigger: CAACTTCATGGCCCTGGGCCAGGGCCAGCTCTGAGA...CGTTGACTGCTCTCCCCGACCTCCAAGGACTCCTTTCAATCTGTCACCCCCTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR CAA 90 bp TCCACTGAGGAAGGATGTGCAGGATCCTCCCAAGGGGGTGACAGATaGAAAGGAGTCCTTGGAGGTCGGGGAGAGCAGTCAACGCATGGG +
Preference number: 2 (lower is better)
Translates to: STEEGCAGSSQGGDR*KGVLGGRGEQSTHG
Trigger: CCCATGCGTTGACTGCTCTCCCCGACCTCCAAGGACTCCTTTCAATCTGTCACCCCCTTGGGAGGATCCTGCACATCCTTCCTCAGTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000533854.6
ENST00000673855.1
3UTR-3UTR GCA 90 bp GTGTCCTTGGACACCAGGAGAGGGAATGTGGACACACTGAGGGACACCAGGGACGTGCACGAGTCCAGCTaGATCTGTGTAAGGAGCTTG +
Preference number: 2 (lower is better)
Translates to: VSLDTRRGNVDTLRDTRDVHESS*ICVRSL
Trigger: CAAGCTCCTTACACAGATGCAGCTGGACTCGTGCAC...GTCCCTGGTGTCCCTCAGTGTGTCCACATTCCCTCTCCTGGTGTCCAAGGACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR-3UTR CCA 90 bp AGGGCCTTGGTCCGGAAATATTACCCTTGTAAGGGGACAGTATCCCCAGGACCAAGCCACTGCTGTGATTaGCACTCACATGGGCGGGGC +
Preference number: 2 (lower is better)
Translates to: RALVRKYYPCKGTVSPGPSHCCD*HSHGRG
Trigger: GCCCCGCCCATGTGAGTGCCAATCACAGCAGTGGCT...TGGTCCTGGGGATACTGTCCCCTTACAAGGGTAATATTTCCGGACCAAGGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR-3UTR CCA 90 bp CCCAACCAGAGACATGCCAGCCCCGAGATAACCTTCCCTCCAACCAGAGAGATGGGGCATGGCTTGCAGTaGCTTCTGTGGACTTACGGA +
Preference number: 2 (lower is better)
Translates to: PNQRHASPEITFPPTREMGHGLQ*LLWTYG
Trigger: TCCGTAAGTCCACAGAAGCCACTGCAAGCCATGCCC...CATCTCTCTGGTTGGAGGGAAGGTTATCTCGGGGCTGGCATGTCTCTGGTTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR-3UTR CCA 90 bp ATGAGAACTCAGGCCTCTGAACCAGCAGGACAGAGAGCCCACGCATGCAAACCTGAGTCATTGGAGTTGTaGGTGGGTGGGAGGGGAGTG +
Preference number: 2 (lower is better)
Translates to: MRTQASEPAGQRAHACKPESLEL*VGGRGV
Trigger: CACTCCCCTCCCACCCACCCACAACTCCAATGACTC...AGGTTTGCATGCGTGGGCTCTCTGTCCTGCTGGTTCAGAGGCCTGAGTTCTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR-3UTR TCA 90 bp AGGACTGTAGGTGCCATGCTCTTGGGGGTGCACTTGAAACAGGACTTGCAGAGCCTTACGGAGGGTAATTaGAACCCTCCTGGCTCCGGT +
Preference number: 2 (lower is better)
Translates to: RTVGAMLLGVHLKQDLQSLTEGN*NPPGSG
Trigger: ACCGGAGCCAGGAGGGTTTCAATTACCCTCCGTAAG...GCTCTGCAAGTCCTGTTTCAAGTGCACCCCCAAGAGCATGGCACCTACAGTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR-3UTR TCA 90 bp GAGACTGTGCCTGGGTTGAAGATGGTGAATCCATTCTTGGGTGAATCCCAAGCCAAGGCTGACCTCCCCTaGGCAGCCAGGATTTCTGCC +
Preference number: 2 (lower is better)
Translates to: ETVPGLKMVNPFLGESQAKADLP*AARISA
Trigger: GGCAGAAATCCTGGCTGCTCAGGGGAGGTCAGCCTT...GGCTTGGGATTCACCCAAGAATGGATTCACCATCTTCAACCCAGGCACAGTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR-3UTR GCA 90 bp AGGACTGTAGGTGCCATGCTCTTGGGGGTGCACTTGAAACAGGACTTGCAGAGCCCCAGACAATCAGCTTaGCCACAGACTCCAGACTCC +
Preference number: 2 (lower is better)
Translates to: RTVGAMLLGVHLKQDLQSPRQSA*PQTPDS
Trigger: GGAGTCTGGAGTCTGTGGGCAAGCTGATTGTCTGGG...GCTCTGCAAGTCCTGTTTCAAGTGCACCCCCAAGAGCATGGCACCTACAGTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR-3UTR GCA 90 bp AGGACTGTAGGTGCCATGCTCTTGGGGGTGCACTTGAAACAGGACTTGCAGAGCAGGCCAGTTGGCAAGTaGACGAGTCCAGCTGCATCT +
Preference number: 2 (lower is better)
Translates to: RTVGAMLLGVHLKQDLQSRPVGK*TSPAAS
Trigger: AGATGCAGCTGGACTCGTGCACTTGCCAACTGGCCT...GCTCTGCAAGTCCTGTTTCAAGTGCACCCCCAAGAGCATGGCACCTACAGTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR-3UTR CCA 90 bp GACACATGCACCCACCCCCAAACAGGTAATGACCGAGAACCTGTTCCTAAGATGTTCTGGACTACGTGCTaGAGCCCACGTGTCGCCACC +
Preference number: 2 (lower is better)
Translates to: DTCTHPQTGNDREPVPKMFWTTC*SPRVAT
Trigger: GGTGGCGACACGTGGGCTCCAGCACGTAGTCCAGAA...CATCTTAGGAACAGGTTCTCGGTCATTACCTGTTTGGGGGTGGGTGCATGTGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR-3UTR CCA 90 bp GCTGGAGAACACGTTGGCTCCAGAATGTTCTCTATCCTCTTTCCAGGGGCAGGCGCCTCGTCTCTTCTATaGCACACTGGAGCAGCCACT +
Preference number: 2 (lower is better)
Translates to: AGEHVGSRMFSILFPGAGASSLL*HTGAAT
Trigger: AGTGGCTGCTCCAGTGTGCCATAGAAGAGACGAGGC...GCCTGCCCCTGGAAAGAGGATAGAGAACATTCTGGAGCCAACGTGTTCTCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR-3UTR CCA 90 bp GAGACTGTGCCTGGGTTGAAGATGGTGAATCCATTCTTGGGTGAATCCCAAGCCCTGTCCTGGGAGACGTaGATGCTAGAGGGGCACCTG +
Preference number: 2 (lower is better)
Translates to: ETVPGLKMVNPFLGESQALSWET*MLEGHL
Trigger: CAGGTGCCCCTCTAGCATCCACGTCTCCCAGGACAG...GGCTTGGGATTCACCCAAGAATGGATTCACCATCTTCAACCCAGGCACAGTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR CAA 90 bp TTTCGGCCAGATGGTGCAGATCTTGAATGTGAATGGCCAGGCCAGTaGGCAAGTGCACGAGTCCAGCTGCATCTGTGTAAGGAGCTTGGC +
Preference number: 2 (lower is better)
Translates to: FRPDGADLECEWPGQ*ASARVQLHLCKELG
Trigger: GCCAAGCTCCTTACACAGATGCAGCTGGACTCGTGCACTTGCCAACTGGCCTGGCCATTCACATTCAAGATCTGCACCATCTGGCCGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR CAA 90 bp GGCAGCCTTCGGAGAGCAGCTGGATTATTCCAAGTCTGCCTTTGTTaGCACTCAAGCTGCACCAGGTGTCCTCAAATCCAGCTCCCACTC +
Preference number: 2 (lower is better)
Translates to: GSLRRAAGLFQVCLC*HSSCTRCPQIQLPL
Trigger: GAGTGGGAGCTGGATTTGAGGACACCTGGTGCAGCTTGAGTGCAAACAAAGGCAGACTTGGAATAATCCAGCTGCTCTCCGAAGGCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR CAA 90 bp CACAGGCAGCCTTCGGAGAGCAGCTGGATTATTCCAAGTCTGCCTTaGTTTGCACTCAAGCTGCACCAGGTGTCCTCAAATCCAGCTCCC +
Preference number: 2 (lower is better)
Translates to: HRQPSESSWIIPSLP*FALKLHQVSSNPAP
Trigger: GGGAGCTGGATTTGAGGACACCTGGTGCAGCTTGAGTGCAAACAAAGGCAGACTTGGAATAATCCAGCTGCTCTCCGAAGGCTGCCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR CAA 90 bp AAAATTCATGTGCGTTATTTAAGCCACTCAGTCTGTGGTAGTTCATaGCGGCAGCCCGGCTGCCTGACACACCGCCTCTCCAAGGCTGCG +
Preference number: 2 (lower is better)
Translates to: KIHVRYLSHSVCGSS*RQPGCLTHRLSKAA
Trigger: CGCAGCCTTGGAGAGGCGGTGTGTCAGGCAGCCGGGCTGCCGCAATGAACTACCACAGACTGAGTGGCTTAAATAACGCACATGAATTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR-3UTR TCA 90 bp GCTGGAGAACACGTTGGCTCCAGAATGTTCTCTATCCTCTTTCCAGGGGCAGGCAACACAGGATTCTTCTaGAGGTCACTGGTGGGGCTG +
Preference number: 2 (lower is better)
Translates to: AGEHVGSRMFSILFPGAGNTGFF*RSLVGL
Trigger: CAGCCCCACCAGTGACCTTCAGAAGAATCCTGTGTT...GCCTGCCCCTGGAAAGAGGATAGAGAACATTCTGGAGCCAACGTGTTCTCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR-3UTR GCA 90 bp AGGACTGTAGGTGCCATGCTCTTGGGGGTGCACTTGAAACAGGACTTGCAGAGCGCTTCCTGGAGCCACTaGTGTGATTGGCACTCACAT +
Preference number: 2 (lower is better)
Translates to: RTVGAMLLGVHLKQDLQSASWSH*CDWHSH
Trigger: ATGTGAGTGCCAATCACAGCAGTGGCTCCAGGAAGC...GCTCTGCAAGTCCTGTTTCAAGTGCACCCCCAAGAGCATGGCACCTACAGTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR-3UTR GCA 90 bp AGGACTGTAGGTGCCATGCTCTTGGGGGTGCACTTGAAACAGGACTTGCAGAGCTCATCCATCCACCTGTaGACCTACTCCCTAGGCAGA +
Preference number: 2 (lower is better)
Translates to: RTVGAMLLGVHLKQDLQSSSIHL*TYSLGR
Trigger: TCTGCCTAGGGAGTAGGTGCACAGGTGGATGGATGA...GCTCTGCAAGTCCTGTTTCAAGTGCACCCCCAAGAGCATGGCACCTACAGTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR-3UTR GCA 90 bp GCAGAGCAGAGCAGTGCAAATATTACCAGCTGTGCGGTCATGAGCAAGTCCCTACCCTGCTTGCATCCCTaGTTGCTTGGCCCTGACAGT +
Preference number: 2 (lower is better)
Translates to: AEQSSANITSCAVMSKSLPCLHP*LLGPDS
Trigger: ACTGTCAGGGCCAAGCAAGCAGGGATGCAAGCAGGG...TAGGGACTTGCTCATGACCGCACAGCTGGTAATATTTGCACTGCTCTGCTCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR-3UTR CCA 90 bp GACACATGCACCCACCCCCAAACAGGTAATGACCGAGAACCTGTTCCTAAGATGACAGCTAAGCATGGGTaGCCTGGGCCTGTCAACCAC +
Preference number: 2 (lower is better)
Translates to: DTCTHPQTGNDREPVPKMTAKHG*PGPVNH
Trigger: GTGGTTGACAGGCCCAGGCCACCCATGCTTAGCTGT...CATCTTAGGAACAGGTTCTCGGTCATTACCTGTTTGGGGGTGGGTGCATGTGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR-3UTR CCA 90 bp GAGACTGTGCCTGGGTTGAAGATGGTGAATCCATTCTTGGGTGAATCCCAAGCCAATGGCCAGGCCAGTTaGCAAGTGCACGAGTCCAGC +
Preference number: 2 (lower is better)
Translates to: ETVPGLKMVNPFLGESQANGQAS*QVHESS
Trigger: GCTGGACTCGTGCACTTGCCAACTGGCCTGGCCATT...GGCTTGGGATTCACCCAAGAATGGATTCACCATCTTCAACCCAGGCACAGTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR-3UTR CCA 90 bp CACCTGTGCACCTACTCCCTAGGCAGAGTGCTGTGTTCCAAAGGCAGGTTAACTTGGGTGGGAGGGGAGTaGGCTTGGAAACCATTTAGG +
Preference number: 2 (lower is better)
Translates to: HLCTYSLGRVLCSKGRLTWVGGE*AWKPFR
Trigger: CCTAAATGGTTTCCAAGCCCACTCCCCTCCCACCCA...AGTTAACCTGCCTTTGGAACACAGCACTCTGCCTAGGGAGTAGGTGCACAGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR CAA 90 bp CAGACCTCTATATCAGAGTCACCTTTCGGCCAGATGGTGCAGATCTaGAATGTGAATGGCCAGGCCAGTTGGCAAGTGCACGAGTCCAGC +
Preference number: 2 (lower is better)
Translates to: QTSISESPFGQMVQI*NVNGQASWQVHESS
Trigger: GCTGGACTCGTGCACTTGCCAACTGGCCTGGCCATTCACATTCAAGATCTGCACCATCTGGCCGAAAGGTGACTCTGATATAGAGGTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR-3UTR TCA 90 bp TACGAGGACACAGGACAACAGGTGTCAAGAACCCTGGCACCTACACCGCTGGACCCCCCATTACAGGAATaGAAAGACAGAAGTTCCGAG +
Preference number: 2 (lower is better)
Translates to: YEDTGQQVSRTLAPTPLDPPLQE*KDRSSE
Trigger: CTCGGAACTTCTGTCTTTTCATTCCTGTAATGGGGG...GTCCAGCGGTGTAGGTGCCAGGGTTCTTGACACCTGTTGTCCTGTGTCCTCGTA
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR-3UTR GCA 90 bp ATGAGAACTCAGGCCTCTGAACCAGCAGGACAGAGAGCCCACGCATGCAAACCTAGTTTGGACTTGAACTaGAAGTCCTCACCGGGTCTC +
Preference number: 2 (lower is better)
Translates to: MRTQASEPAGQRAHACKPSLDLN*KSSPGL
Trigger: GAGACCCGGTGAGGACTTGCAGTTCAAGTCCAAACT...AGGTTTGCATGCGTGGGCTCTCTGTCCTGCTGGTTCAGAGGCCTGAGTTCTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR-3UTR CCA 90 bp GGGGTGCACTTGAAACAGGACTTGCAGAGCAGAGCAGTGCAAATATTACCAGCTGGCTCAGGGGTCACCTaGAGAGAACAGGAAGGGTTG +
Preference number: 2 (lower is better)
Translates to: GVHLKQDLQSRAVQILPAGSGVT*REQEGL
Trigger: CAACCCTTCCTGTTCTCTCCAGGTGACCCCTGAGCC...AGCTGGTAATATTTGCACTGCTCTGCTCTGCAAGTCCTGTTTCAAGTGCACCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR-3UTR CCA 90 bp TCTACAAGATTCCATCTTAGGGCCTTGGTCCGGAAATATTACCCTTGTAAGGGGTGTCAACCACAGGCCTaGGGCTCAGGGGTCACCTGG +
Preference number: 2 (lower is better)
Translates to: STRFHLRALVRKYYPCKGCQPQA*GSGVTW
Trigger: CCAGGTGACCCCTGAGCCCCAGGCCTGTGGTTGACA...CCCCTTACAAGGGTAATATTTCCGGACCAAGGCCCTAAGATGGAATCTTGTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR-3UTR CCA 90 bp TTATTCCAAGTCTGCCTTTGTTTGCACTCAAGCTGCACCAGGTGTCCTCAAATCTTGGCATCTCAGAGCTaGCCCTGGCCCAGGGCCATG +
Preference number: 2 (lower is better)
Translates to: LFQVCLCLHSSCTRCPQILASQS*PWPRAM
Trigger: CATGGCCCTGGGCCAGGGCCAGCTCTGAGATGCCAA...GATTTGAGGACACCTGGTGCAGCTTGAGTGCAAACAAAGGCAGACTTGGAATAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR CAA 90 bp GAGCCCGAGACTATGAGATCATTTCTAAGGATTTATCATCCCTGCTaGCATCCCTGCTTGCTTGGCCCTGACAGTGGGCTGGAGAACACG +
Preference number: 2 (lower is better)
Translates to: EPETMRSFLRIYHPC*HPCLLGPDSGLENT
Trigger: CGTGTTCTCCAGCCCACTGTCAGGGCCAAGCAAGCAGGGATGCAAGCAGGGATGATAAATCCTTAGAAATGATCTCATAGTCTCGGGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR-3UTR GCA 90 bp TACGAGGACACAGGACAACAGGTGTCAAGAACCCTGGCACCTACACCGCTGGACGAATGGGTGTCACACTaGCTGGTCTTCTGGAAAAAT +
Preference number: 2 (lower is better)
Translates to: YEDTGQQVSRTLAPTPLDEWVSH*LVFWKN
Trigger: ATTTTTCCAGAAGACCAGGCAGTGTGACACCCATTC...GTCCAGCGGTGTAGGTGCCAGGGTTCTTGACACCTGTTGTCCTGTGTCCTCGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR-3UTR GCA 90 bp ATGAGAACTCAGGCCTCTGAACCAGCAGGACAGAGAGCCCACGCATGCAAACCTAACATTAAGGAGGGGTaGCCCCTACATGTGATTCTC +
Preference number: 2 (lower is better)
Translates to: MRTQASEPAGQRAHACKPNIKEG*PLHVIL
Trigger: GAGAATCACATGTAGGGGGCACCCCTCCTTAATGTT...AGGTTTGCATGCGTGGGCTCTCTGTCCTGCTGGTTCAGAGGCCTGAGTTCTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR-3UTR GCA 90 bp GGGGTGCACTTGAAACAGGACTTGCAGAGCAGAGCAGTGCAAATATTACCAGCTTCTCCCCACTGCTACTaGCAGCCATGTGCACTCCAT +
Preference number: 2 (lower is better)
Translates to: GVHLKQDLQSRAVQILPASPHCY*QPCALH
Trigger: ATGGAGTGCACATGGCTGGCAGTAGCAGTGGGGAGA...AGCTGGTAATATTTGCACTGCTCTGCTCTGCAAGTCCTGTTTCAAGTGCACCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR-3UTR CCA 90 bp TATGAGGAAGACCAGGCCTTAAGAAGAGACCGTGTGCAAAGATGTTCTAGTGACGCCTGTGGCAACCTATaGATTTCCCCCACGCCCCCA +
Preference number: 2 (lower is better)
Translates to: YEEDQALRRDRVQRCSSDACGNL*ISPTPP
Trigger: TGGGGGCGTGGGGGAAATCCATAGGTTGCCACAGGC...GTCACTAGAACATCTTTGCACACGGTCTCTTCTTAAGGCCTGGTCTTCCTCATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR-3UTR TCA 90 bp GGGGTGCACTTGAAACAGGACTTGCAGAGCAGAGCAGTGCAAATATTACCAGCTTGTAGTGGTGACCACTaGGCCTCGTCTCTTCTATGG +
Preference number: 2 (lower is better)
Translates to: GVHLKQDLQSRAVQILPACSGDH*ASSLLW
Trigger: CCATAGAAGAGACGAGGCTCAGTGGTCACCACTACA...AGCTGGTAATATTTGCACTGCTCTGCTCTGCAAGTCCTGTTTCAAGTGCACCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR-3UTR CCA 90 bp GCTGGGAGGAGTCTACTACTTGAGCTTGGTTGCATTTTGCTTGTAAAACTTACATGCTCAGGCCTTAGGTaGAATGTGGCTCCCCCGGCC +
Preference number: 2 (lower is better)
Translates to: AGRSLLLELGCILLVKLTCSGLR*NVAPPA
Trigger: GGCCGGGGGAGCCACATTCCACCTAAGGCCTGAGCA...TGTAAGTTTTACAAGCAAAATGCAACCAAGCTCAAGTAGTAGACTCCTCCCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR CAA 90 bp ATGAGATCATTTCTAAGGATTTATCATCCCTGCTTGCATCCCTGCTaGCTTGGCCCTGACAGTGGGCTGGAGAACACGTTGGCTCCAGAA +
Preference number: 2 (lower is better)
Translates to: MRSFLRIYHPCLHPC*LGPDSGLENTLAPE
Trigger: TTCTGGAGCCAACGTGTTCTCCAGCCCACTGTCAGGGCCAAGCAAGCAGGGATGCAAGCAGGGATGATAAATCCTTAGAAATGATCTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR-3UTR TCA 90 bp AGGACTGTAGGTGCCATGCTCTTGGGGGTGCACTTGAAACAGGACTTGCAGAGCGCCCTGATTCGGAGATaGATTTATAGACAGAAAGGA +
Preference number: 2 (lower is better)
Translates to: RTVGAMLLGVHLKQDLQSALIRR*IYRQKG
Trigger: TCCTTTCTGTCTATAAATTCATCTCCGAATCAGGGC...GCTCTGCAAGTCCTGTTTCAAGTGCACCCCCAAGAGCATGGCACCTACAGTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR-3UTR GCA 90 bp TATGAGGAAGACCAGGCCTTAAGAAGAGACCGTGTGCAAAGATGTTCTAGTGACCAACTGTCTCCCCACTaGTACTGCCAGCCATGTGCA +
Preference number: 2 (lower is better)
Translates to: YEEDQALRRDRVQRCSSDQLSPH*YCQPCA
Trigger: TGCACATGGCTGGCAGTAGCAGTGGGGAGACAGTTG...GTCACTAGAACATCTTTGCACACGGTCTCTTCTTAAGGCCTGGTCTTCCTCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR-3UTR CCA 90 bp TATGAGGAAGACCAGGCCTTAAGAAGAGACCGTGTGCAAAGATGTTCTAGTGACGGAGGGGAGTGGGCTTaGAAACCATTTAGGCCAAGC +
Preference number: 2 (lower is better)
Translates to: YEEDQALRRDRVQRCSSDGGEWA*KPFRPS
Trigger: GCTTGGCCTAAATGGTTTCCAAGCCCACTCCCCTCC...GTCACTAGAACATCTTTGCACACGGTCTCTTCTTAAGGCCTGGTCTTCCTCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR-3UTR CCA 90 bp TACGAGGACACAGGACAACAGGTGTCAAGAACCCTGGCACCTACACCGCTGGACGCGGTGAGGAGAACATaGTTTTGGTATTATTCTGTA +
Preference number: 2 (lower is better)
Translates to: YEDTGQQVSRTLAPTPLDAVRRT*FWYYSV
Trigger: TACAGAATAATACCAAAACCATGTTCTCCTCACCGC...GTCCAGCGGTGTAGGTGCCAGGGTTCTTGACACCTGTTGTCCTGTGTCCTCGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR-3UTR CCA 90 bp GAGACTGTGCCTGGGTTGAAGATGGTGAATCCATTCTTGGGTGAATCCCAAGCCACTCATCTGCATGCCTaGAACCCAAAGAGCAAAAGC +
Preference number: 2 (lower is better)
Translates to: ETVPGLKMVNPFLGESQATHLHA*NPKSKS
Trigger: GCTTTTGCTCTTTGGGTTCCAGGCATGCAGATGAGT...GGCTTGGGATTCACCCAAGAATGGATTCACCATCTTCAACCCAGGCACAGTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR-3UTR CCA 90 bp AGGACTGTAGGTGCCATGCTCTTGGGGGTGCACTTGAAACAGGACTTGCAGAGCTCAGAATCTCCAGGCTaGGAGAATAACTTACTAGTC +
Preference number: 2 (lower is better)
Translates to: RTVGAMLLGVHLKQDLQSSESPG*ENNLLV
Trigger: GACTAGTAAGTTATTCTCCCAGCCTGGAGATTCTGA...GCTCTGCAAGTCCTGTTTCAAGTGCACCCCCAAGAGCATGGCACCTACAGTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR CAA 90 bp AGGACAGAGGCCTCAGAAGAAACCAATCCTGCCAACACCGTGATCTaGGACTCCGGTACCCAGAACTGTAGGAAAATTCATGTGCGTTAT +
Preference number: 2 (lower is better)
Translates to: RTEASEETNPANTVI*DSGTQNCRKIHVRY
Trigger: ATAACGCACATGAATTTTCCTACAGTTCTGGGTACCGGAGTCCAAGATCACGGTGTTGGCAGGATTGGTTTCTTCTGAGGCCTCTGTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR CAA 90 bp TTCAAAGGCTGCTTCCAGAAAGGCAATGAAGCTTCTGCCTGTCTCTaGGGACCCTCACTCTTAAAACCAAGCTGTCACCCTATGAGGAAG +
Preference number: 2 (lower is better)
Translates to: FKGCFQKGNEASACL*GPSLLKPSCHPMRK
Trigger: CTTCCTCATAGGGTGACAGCTTGGTTTTAAGAGTGAGGGTCCCAAGAGACAGGCAGAAGCTTCATTGCCTTTCTGGAAGCAGCCTTTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR CAA 90 bp TGCAGAACATTTAGGACTGTAGGTGCCATGCTCTTGGGGGTGCACTaGAAACAGGACTTGCAGAGCAGAGCAGTGCAAATATTACCAGCT +
Preference number: 2 (lower is better)
Translates to: CRTFRTVGAMLLGVH*KQDLQSRAVQILPA
Trigger: AGCTGGTAATATTTGCACTGCTCTGCTCTGCAAGTCCTGTTTCAAGTGCACCCCCAAGAGCATGGCACCTACAGTCCTAAATGTTCTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR CAA 90 bp GTACATTTACCATGCAGAACATTTAGGACTGTAGGTGCCATGCTCTaGGGGGTGCACTTGAAACAGGACTTGCAGAGCAGAGCAGTGCAA +
Preference number: 2 (lower is better)
Translates to: VHLPCRTFRTVGAML*GVHLKQDLQSRAVQ
Trigger: TTGCACTGCTCTGCTCTGCAAGTCCTGTTTCAAGTGCACCCCCAAGAGCATGGCACCTACAGTCCTAAATGTTCTGCATGGTAAATGTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR-3UTR TCA 90 bp GCTGGGAGGAGTCTACTACTTGAGCTTGGTTGCATTTTGCTTGTAAAACTTACACCAGTACCAAGGACATaGGGCCCTAGCACCTGTCCT +
Preference number: 2 (lower is better)
Translates to: AGRSLLLELGCILLVKLTPVPRT*GPSTCP
Trigger: AGGACAGGTGCTAGGGCCTCATGTCCTTGGTACTGG...TGTAAGTTTTACAAGCAAAATGCAACCAAGCTCAAGTAGTAGACTCCTCCCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR-3UTR CCA 90 bp GCTGGAGAACACGTTGGCTCCAGAATGTTCTCTATCCTCTTTCCAGGGGCAGGCTGTATATTAATAAACTaGAGCACATGGCCACCCTGT +
Preference number: 2 (lower is better)
Translates to: AGEHVGSRMFSILFPGAGCILIN*STWPPC
Trigger: ACAGGGTGGCCATGTGCTCCAGTTTATTAATATACA...GCCTGCCCCTGGAAAGAGGATAGAGAACATTCTGGAGCCAACGTGTTCTCCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR CAA 90 bp AGAAGAATGGGTGTCACACTGCCTGGTCTTCTGGAAAAATCTGATTaGCCCACATCTGTCCTACACCCAGGAAGCAGACACTCCTCTATA +
Preference number: 2 (lower is better)
Translates to: RRMGVTLPGLLEKSD*PTSVLHPGSRHSSI
Trigger: TATAGAGGAGTGTCTGCTTCCTGGGTGTAGGACAGATGTGGGCAAATCAGATTTTTCCAGAAGACCAGGCAGTGTGACACCCATTCTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR-3UTR TCA 90 bp GAGACTGTGCCTGGGTTGAAGATGGTGAATCCATTCTTGGGTGAATCCCAAGCCCAGTACCTCAGAACATaGCTGTATTTGGAGATAGAG +
Preference number: 2 (lower is better)
Translates to: ETVPGLKMVNPFLGESQAQYLRT*LYLEIE
Trigger: CTCTATCTCCAAATACAGTCATGTTCTGAGGTACTG...GGCTTGGGATTCACCCAAGAATGGATTCACCATCTTCAACCCAGGCACAGTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR-3UTR TCA 90 bp GGGGTGCACTTGAAACAGGACTTGCAGAGCAGAGCAGTGCAAATATTACCAGCTTGTCACACGAGCATATaGAAGTGGTTCACTGAGTGT +
Preference number: 2 (lower is better)
Translates to: GVHLKQDLQSRAVQILPACHTSI*KWFTEC
Trigger: ACACTCAGTGAACCACTTTCATATGCTCGTGTGACA...AGCTGGTAATATTTGCACTGCTCTGCTCTGCAAGTCCTGTTTCAAGTGCACCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR-3UTR TCA 90 bp TTATTCTTCCTTGGGGTGCTGCAAGTATCTGATCTCTTAGCTAAATTCCACATTACCTTAGCCCCACAGTaGGCACACAGGGAGTCCTGG +
Preference number: 2 (lower is better)
Translates to: LFFLGVLQVSDLLAKFHITLAPQ*AHRESW
Trigger: CCAGGACTCCCTGTGTGCTCACTGTGGGGCTAAGGT...AATGTGGAATTTAGCTAAGAGATCAGATACTTGCAGCACCCCAAGGAAGAATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR CAA 90 bp ACAGGGGTGACAAGGAGAAAGGAGTTCAGAAGGAACACTGACAGCTaGACATGTCTAAGTCAGCCAGACCTCTATATCAGAGTCACCTTT +
Preference number: 2 (lower is better)
Translates to: TGVTRRKEFRRNTDS*TCLSQPDLYIRVTF
Trigger: AAAGGTGACTCTGATATAGAGGTCTGGCTGACTTAGACATGTCAAGCTGTCAGTGTTCCTTCTGAACTCCTTTCTCCTTGTCACCCCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR CAA 90 bp CTTAGGTGGTTTAGACAGATGTCTACAAGATTCCATCTTAGGGCCTaGGTCCGGAAATATTACCCTTGTAAGGGGACAGTATCCCCAGGA +
Preference number: 2 (lower is better)
Translates to: LRWFRQMSTRFHLRA*VRKYYPCKGTVSPG
Trigger: TCCTGGGGATACTGTCCCCTTACAAGGGTAATATTTCCGGACCAAGGCCCTAAGATGGAATCTTGTAGACATCTGTCTAAACCACCTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR-3UTR TCA 90 bp GGGGTGCACTTGAAACAGGACTTGCAGAGCAGAGCAGTGCAAATATTACCAGCTGAACCTAGTGATGTCTaGGTCCACAATCAACTTGTA +
Preference number: 2 (lower is better)
Translates to: GVHLKQDLQSRAVQILPAEPSDV*VHNQLV
Trigger: TACAAGTTGATTGTGGACTCAGACATCACTAGGTTC...AGCTGGTAATATTTGCACTGCTCTGCTCTGCAAGTCCTGTTTCAAGTGCACCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR-3UTR CCA 90 bp ATGTCTGAGTCCACAATCAACTTGTATTTAGGAGTGGATTCTACTTTTTCCAGGACAGGAAGGGTTGTCTaGCCACCCACAGTCCAGGGA +
Preference number: 2 (lower is better)
Translates to: MSESTINLYLGVDSTFSRTGRVV*PPTVQG
Trigger: TCCCTGGACTGTGGGTGGCCAGACAACCCTTCCTGT...CCTGGAAAAAGTAGAATCCACTCCTAAATACAAGTTGATTGTGGACTCAGACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR-3UTR CCA 90 bp TTATTCTTCCTTGGGGTGCTGCAAGTATCTGATCTCTTAGCTAAATTCCACATTGAGCTGCTGGCTTCCTaGAGCCACTGCTGTGATTGG +
Preference number: 2 (lower is better)
Translates to: LFFLGVLQVSDLLAKFHIELLAS*SHCCDW
Trigger: CCAATCACAGCAGTGGCTCCAGGAAGCCAGCAGCTC...AATGTGGAATTTAGCTAAGAGATCAGATACTTGCAGCACCCCAAGGAAGAATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR-3UTR TCA 90 bp GGGGTGCACTTGAAACAGGACTTGCAGAGCAGAGCAGTGCAAATATTACCAGCTAATTCATTTGTAGAATaGCCCTCAGTACCTCAGAAC +
Preference number: 2 (lower is better)
Translates to: GVHLKQDLQSRAVQILPANSFVE*PSVPQN
Trigger: GTTCTGAGGTACTGAGGGTCATTCTACAAATGAATT...AGCTGGTAATATTTGCACTGCTCTGCTCTGCAAGTCCTGTTTCAAGTGCACCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR-3UTR GCA 90 bp ATGTCTGAGTCCACAATCAACTTGTATTTAGGAGTGGATTCTACTTTTTCCAGGTGCGCACACCAGACGTaGAGCTTTCTGGACTACGTG +
Preference number: 2 (lower is better)
Translates to: MSESTINLYLGVDSTFSRCAHQT*SFLDYV
Trigger: CACGTAGTCCAGAAAGCTGCACGTCTGGTGTGCGCA...CCTGGAAAAAGTAGAATCCACTCCTAAATACAAGTTGATTGTGGACTCAGACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR-3UTR GCA 90 bp GGGGTGCACTTGAAACAGGACTTGCAGAGCAGAGCAGTGCAAATATTACCAGCTACAGACCTTGTAGGATaGTCTCCAGAATTGATCATT +
Preference number: 2 (lower is better)
Translates to: GVHLKQDLQSRAVQILPATDLVG*SPELII
Trigger: AATGATCAATTCTGGAGAGCATCCTACAAGGTCTGT...AGCTGGTAATATTTGCACTGCTCTGCTCTGCAAGTCCTGTTTCAAGTGCACCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR-3UTR CCA 90 bp ATGAAATCACACCGGAGAAACAGCCCAGGACAGAAGCTGTTATATAGTAGGTGCTCCATCTTAGGGCCTTaGTCCGGAAATATTACCCTT +
Preference number: 2 (lower is better)
Translates to: MKSHRRNSPGQKLLYSRCSILGP*SGNITL
Trigger: AAGGGTAATATTTCCGGACCAAGGCCCTAAGATGGA...GCACCTACTATATAACAGCTTCTGTCCTGGGCTGTTTCTCCGGTGTGATTTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR-3UTR CCA 90 bp TATGAGGAAGACCAGGCCTTAAGAAGAGACCGTGTGCAAAGATGTTCTAGTGACCACCAAAAACAAGCCTaGCACAGTGACAGAGAAAGA +
Preference number: 2 (lower is better)
Translates to: YEEDQALRRDRVQRCSSDHQKQA*HSDRER
Trigger: TCTTTCTCTGTCACTGTGCCAGGCTTGTTTTTGGTG...GTCACTAGAACATCTTTGCACACGGTCTCTTCTTAAGGCCTGGTCTTCCTCATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR-3UTR CCA 90 bp TATGAGGAAGACCAGGCCTTAAGAAGAGACCGTGTGCAAAGATGTTCTAGTGACTCATTGACTCACCCATaGGACAAGAAAGAGGGTAGA +
Preference number: 2 (lower is better)
Translates to: YEEDQALRRDRVQRCSSDSLTHP*DKKEGR
Trigger: TCTACCCTCTTTCTTGTCCCATGGGTGAGTCAATGA...GTCACTAGAACATCTTTGCACACGGTCTCTTCTTAAGGCCTGGTCTTCCTCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR-3UTR CCA 90 bp GCTGGGAGGAGTCTACTACTTGAGCTTGGTTGCATTTTGCTTGTAAAACTTACAGAGAAAGTCAAGACTTaGAGAGCTGCCAATTGGCCC +
Preference number: 2 (lower is better)
Translates to: AGRSLLLELGCILLVKLTEKVKT*RAANWP
Trigger: GGGCCAATTGGCAGCTCTCCAAGTCTTGACTTTCTC...TGTAAGTTTTACAAGCAAAATGCAACCAAGCTCAAGTAGTAGACTCCTCCCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR-3UTR CCA 90 bp TATGAGGAAGACCAGGCCTTAAGAAGAGACCGTGTGCAAAGATGTTCTAGTGACTGCTGGGGTTGCTTCTaGGAAAGTTGTCTTTATTCC +
Preference number: 2 (lower is better)
Translates to: YEEDQALRRDRVQRCSSDCWGCF*ESCLYS
Trigger: GGAATAAAGACAACTTTCCCAGAAGCAACCCCAGCA...GTCACTAGAACATCTTTGCACACGGTCTCTTCTTAAGGCCTGGTCTTCCTCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR-3UTR CCA 90 bp ATGTCTGAGTCCACAATCAACTTGTATTTAGGAGTGGATTCTACTTTTTCCAGGAGGGAGGGAAGAGCATaGACAGGTGTGTCATGTGGA +
Preference number: 2 (lower is better)
Translates to: MSESTINLYLGVDSTFSRREGRA*TGVSCG
Trigger: TCCACATGACACACCTGTCCATGCTCTTCCCTCCCT...CCTGGAAAAAGTAGAATCCACTCCTAAATACAAGTTGATTGTGGACTCAGACAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR-3UTR CCA 90 bp TATATATTAAACACATCTGAATGGTTGCTCATGGGGTGGAGGGGGAAGGAAAAAAGGGCAGCTGAGTTCTaGTGTGAGGAAAGGAGAAAA +
Preference number: 2 (lower is better)
Translates to: YILNTSEWLLMGWRGKEKRAAEF*CEERRK
Trigger: TTTTCTCCTTTCCTCACACCAGAACTCAGCTGCCCT...TTTTTCCTTCCCCCTCCACCCCATGAGCAACCATTCAGATGTGTTTAATATATA
43% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR CAA 90 bp AAAAACATAGAGAAAAAGACCACCCTTCTCTTCCCTCTGAAGCTGTaGCATCTTGATAGGATGTTTGGAATCACTGTTGCCATCTTGCTA +
Preference number: 2 (lower is better)
Translates to: KNIEKKTTLLFPLKL*HLDRMFGITVAILL
Trigger: TAGCAAGATGGCAACAGTGATTCCAAACATCCTATCAAGATGCAACAGCTTCAGAGGGAAGAGAAGGGTGGTCTTTTTCTCTATGTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR CAA 90 bp CATCACCGTTGTTTGCATTTAGACCTTTCCTTCCCCCATTTATCTTaGGATGGGAACCTGGATTATTTCTCTGATTATAGAAGAGGGTAC +
Preference number: 2 (lower is better)
Translates to: HHRCLHLDLSFPHLS*DGNLDYFSDYRRGY
Trigger: GTACCCTCTTCTATAATCAGAGAAATAATCCAGGTTCCCATCCAAAGATAAATGGGGGAAGGAAAGGTCTAAATGCAAACAACGGTGATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR-3UTR TCA 90 bp ATGTCTGAGTCCACAATCAACTTGTATTTAGGAGTGGATTCTACTTTTTCCAGGGTTCAGAAGGAACACTaGCAGCTTGACATGTCTAAG +
Preference number: 2 (lower is better)
Translates to: MSESTINLYLGVDSTFSRVQKEH*QLDMSK
Trigger: CTTAGACATGTCAAGCTGTCAGTGTTCCTTCTGAAC...CCTGGAAAAAGTAGAATCCACTCCTAAATACAAGTTGATTGTGGACTCAGACAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR-3UTR GCA 90 bp TATATATTAAACACATCTGAATGGTTGCTCATGGGGTGGAGGGGGAAGGAAAAAGGATTATTCCAAGTCTaGCTTTGTTTGCACTCAAGC +
Preference number: 2 (lower is better)
Translates to: YILNTSEWLLMGWRGKEKGLFQV*LCLHSS
Trigger: GCTTGAGTGCAAACAAAGGCAGACTTGGAATAATCC...TTTTTCCTTCCCCCTCCACCCCATGAGCAACCATTCAGATGTGTTTAATATATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR-3UTR GCA 90 bp TCTGAGTTGAGTTTGTACATGTTAACGTTTGGTAAAAGTCTCCTGATTGAGGAGAGCGACACACAGCATTaGTTTGCTACTCAAAATCTC +
Preference number: 2 (lower is better)
Translates to: SELSLYMLTFGKSLLIEESDTQH*FATQNL
Trigger: GAGATTTTGAGTAGCAAAGCAATGCTGTGTGTCGCT...CTCCTCAATCAGGAGACTTTTACCAAACGTTAACATGTACAAACTCAACTCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR-3UTR CCA 90 bp TCTGAGTTGAGTTTGTACATGTTAACGTTTGGTAAAAGTCTCCTGATTGAGGAGAATGATTGTCCAGTTTaGAAACGCTATCTGTCTCCA +
Preference number: 2 (lower is better)
Translates to: SELSLYMLTFGKSLLIEENDCPV*KRYLSP
Trigger: TGGAGACAGATAGCGTTTCCAAACTGGACAATCATT...CTCCTCAATCAGGAGACTTTTACCAAACGTTAACATGTACAAACTCAACTCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR GCA 72 bp GCAGCCCGGCTGCCTGACACACCGCCTCTCCAAGGCTaGGCACACCAGACGTGCAGCTTTCTGGACTACGTG +
Preference number: 3 (lower is better)
Translates to: AARLPDTPPLQG*AHQTCSFLDYV
Trigger: CACGTAGTCCAGAAAGCTGCACGTCTGGTGTGCGCAGCCTTGGAGAGGCGGTGTGTCAGGCAGCCGGGCTGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR GCA 72 bp CACTCAGTCTGTGGTAGTTCATTGCGGCAGCCCGGCTaGCTGACACACCGCCTCTCCAAGGCTGCGCACACC +
Preference number: 3 (lower is better)
Translates to: HSVCGSSLRQPG*LTHRLSKAAHT
Trigger: GGTGTGCGCAGCCTTGGAGAGGCGGTGTGTCAGGCAGCCGGGCTGCCGCAATGAACTACCACAGACTGAGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR GCA 72 bp GACACACCGCCTCTCCAAGGCTGCGCACACCAGACGTaGAGCTTTCTGGACTACGTGCTGGAGCCCACGTGT +
Preference number: 3 (lower is better)
Translates to: DTPPLQGCAHQT*SFLDYVLEPTC
Trigger: ACACGTGGGCTCCAGCACGTAGTCCAGAAAGCTGCACGTCTGGTGTGCGCAGCCTTGGAGAGGCGGTGTGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR CCA 72 bp CTCTCCAAGGCTGCGCACACCAGACGTGCAGCTTTCTaGACTACGTGCTGGAGCCCACGTGTCGCCACCATG +
Preference number: 3 (lower is better)
Translates to: LSKAAHTRRAAF*TTCWSPRVATM
Trigger: CATGGTGGCGACACGTGGGCTCCAGCACGTAGTCCAGAAAGCTGCACGTCTGGTGTGCGCAGCCTTGGAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR TCA 72 bp AGCGTACCACCCTCCACCCCCTGTAGTGGTGACCACTaGGCCTCGTCTCTTCTATGGCACACTGGAGCAGCC +
Preference number: 3 (lower is better)
Translates to: SVPPSTPCSGDH*ASSLLWHTGAA
Trigger: GGCTGCTCCAGTGTGCCATAGAAGAGACGAGGCTCAGTGGTCACCACTACAGGGGGTGGAGGGTGGTACGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR TCA 72 bp AAGGGCTCAGAGGCAGAAGGGCTGGGCATGAGCCCATaGATTTGGCGTCTTGCCCCAGGCACAGCCTTGTCG +
Preference number: 3 (lower is better)
Translates to: KGSEAEGLGMSP*IWRLAPGTALS
Trigger: CGACAAGGCTGTGCCTGGGGCAAGACGCCAAATTCATGGGCTCATGCCCAGCCCTTCTGCCTCTGAGCCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR TCA 72 bp CTTGGGGAAAGGGCTCAGAGGCAGAAGGGCTGGGCATaGGCCCATGAATTTGGCGTCTTGCCCCAGGCACAG +
Preference number: 3 (lower is better)
Translates to: LGERAQRQKGWA*AHEFGVLPQAQ
Trigger: CTGTGCCTGGGGCAAGACGCCAAATTCATGGGCTCATGCCCAGCCCTTCTGCCTCTGAGCCCTTTCCCCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR GCA 72 bp GCTGCGCACACCAGACGTGCAGCTTTCTGGACTACGTaGTGGAGCCCACGTGTCGCCACCATGGCTTTCTGT +
Preference number: 3 (lower is better)
Translates to: AAHTRRAAFWTT*WSPRVATMAFC
Trigger: ACAGAAAGCCATGGTGGCGACACGTGGGCTCCAGCACGTAGTCCAGAAAGCTGCACGTCTGGTGTGCGCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR GCA 72 bp CAGGCCTCTGAACCAGCAGGACAGAGAGCCCACGCATaGAAACCTTCAAGGATGGGGCCACCTGGGGCAGAA +
Preference number: 3 (lower is better)
Translates to: QASEPAGQRAHA*KPSRMGPPGAE
Trigger: TTCTGCCCCAGGTGGCCCCATCCTTGAAGGTTTGCATGCGTGGGCTCTCTGTCCTGCTGGTTCAGAGGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR TCA 72 bp TCTATGGCACACTGGAGCAGCCACTGCTACCATGGATaGACCCACACTCACAGTGCTAGCCGGGCCTCAGGC +
Preference number: 3 (lower is better)
Translates to: SMAHWSSHCYHG*THTHSASRASG
Trigger: GCCTGAGGCCCGGCTAGCACTGTGAGTGTGGGTTCATCCATGGTAGCAGTGGCTGCTCCAGTGTGCCATAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR CCA 72 bp GCGCACACCAGACGTGCAGCTTTCTGGACTACGTGCTaGAGCCCACGTGTCGCCACCATGGCTTTCTGTTCT +
Preference number: 3 (lower is better)
Translates to: AHTRRAAFWTTC*SPRVATMAFCS
Trigger: AGAACAGAAAGCCATGGTGGCGACACGTGGGCTCCAGCACGTAGTCCAGAAAGCTGCACGTCTGGTGTGCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR CCA 72 bp AACAGAGCCCAGGTGCCAATTTGCTCAGGCCTTAGGTaGAATGTGGCTCCCCCGGCCTCCGCTGTCCTTTCT +
Preference number: 3 (lower is better)
Translates to: NRAQVPICSGLR*NVAPPASAVLS
Trigger: AGAAAGGACAGCGGAGGCCGGGGGAGCCACATTCCACCTAAGGCCTGAGCAAATTGGCACCTGGGCTCTGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR CCA 72 bp CTGGCACCTACACCGCTGGACTTTGGATTTCTAGCCTaGCAGCCACTGCCATCCCCTCCCCATTGGATTCCC +
Preference number: 3 (lower is better)
Translates to: LAPTPLDFGFLA*QPLPSPPHWIP
Trigger: GGGAATCCAATGGGGAGGGGATGGCAGTGGCTGCCAGGCTAGAAATCCAAAGTCCAGCGGTGTAGGTGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000533854.6
ENST00000673855.1
3UTR CCA 72 bp GGTGTCAAGAACCCTGGCACCTACACCGCTGGACTTTaGATTTCTAGCCTGGCAGCCACTGCCATCCCCTCC +
Preference number: 3 (lower is better)
Translates to: GVKNPGTYTAGL*ISSLAATAIPS
Trigger: GGAGGGGATGGCAGTGGCTGCCAGGCTAGAAATCCAAAGTCCAGCGGTGTAGGTGCCAGGGTTCTTGACACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533854.6
ENST00000673855.1
3UTR CCA 72 bp CAGAGTCCTTGGCAGGGCCTGAGAGGGGTGGCGGGATaGTGTTTACGAGGACACAGGACAACAGGTGTCAAG +
Preference number: 3 (lower is better)
Translates to: QSPWQGLRGVAG*CLRGHRTTGVK
Trigger: CTTGACACCTGTTGTCCTGTGTCCTCGTAAACACCATCCCGCCACCCCTCTCAGGCCCTGCCAAGGACTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533854.6
ENST00000673855.1
3UTR-3UTR CAA 90 bp CCCAACCAGAGACATGCCAGCCCCGAGATAACCTTCCCTCCAACCAGAGAGATGGCTGAGTCATTGGAGTaGTGGGTGGGTGGGAGGGGA +
Preference number: 3 (lower is better)
Translates to: PNQRHASPEITFPPTREMAESLE*WVGGRG
Trigger: TCCCCTCCCACCCACCCACAACTCCAATGACTCAGC...CATCTCTCTGGTTGGAGGGAAGGTTATCTCGGGGCTGGCATGTCTCTGGTTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR-3UTR CAA 90 bp TACGAGGACACAGGACAACAGGTGTCAAGAACCCTGGCACCTACACCGCTGGACTGCTTGCATCCCTGCTaGCTTGGCCCTGACAGTGGG +
Preference number: 3 (lower is better)
Translates to: YEDTGQQVSRTLAPTPLDCLHPC*LGPDSG
Trigger: CCCACTGTCAGGGCCAAGCAAGCAGGGATGCAAGCA...GTCCAGCGGTGTAGGTGCCAGGGTTCTTGACACCTGTTGTCCTGTGTCCTCGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR CCA 72 bp ATGGCACACCCACTGGCCATTTGCTCCATGGTGCCCTaGGAGTCAGCCAGGAAAATGGAATCTGGAGGCCAG +
Preference number: 3 (lower is better)
Translates to: MAHPLAICSMVP*ESARKMESGGQ
Trigger: CTGGCCTCCAGATTCCATTTTCCTGGCTGACTCCCAGGGCACCATGGAGCAAATGGCCAGTGGGTGTGCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533854.6
ENST00000673855.1
3UTR-3UTR CAA 90 bp CCATTGGATTCCCATGCAACCCTGGGGAACACTGAATTTCTCACCACCCAGGTGGAATGGCCAGGCCAGTaGGCAAGTGCACGAGTCCAG +
Preference number: 3 (lower is better)
Translates to: PLDSHATLGNTEFLTTQVEWPGQ*ASARVQ
Trigger: CTGGACTCGTGCACTTGCCAACTGGCCTGGCCATTC...CACCTGGGTGGTGAGAAATTCAGTGTTCCCCAGGGTTGCATGGGAATCCAATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR-3UTR CAA 90 bp GAGACTGTGCCTGGGTTGAAGATGGTGAATCCATTCTTGGGTGAATCCCAAGCCGTCTGTGGTAGTTCATaGCGGCAGCCCGGCTGCCTG +
Preference number: 3 (lower is better)
Translates to: ETVPGLKMVNPFLGESQAVCGSS*RQPGCL
Trigger: CAGGCAGCCGGGCTGCCGCAATGAACTACCACAGAC...GGCTTGGGATTCACCCAAGAATGGATTCACCATCTTCAACCCAGGCACAGTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR TCA 72 bp GCCAGGATTTCTGCCAGGAGACTGCAAGTTTGGACTTaGACTGCAAGTCCTCACCGGGTCTCCAGCCCAACC +
Preference number: 3 (lower is better)
Translates to: ARISARRLQVWT*TASPHRVSSPT
Trigger: GGTTGGGCTGGAGACCCGGTGAGGACTTGCAGTTCAAGTCCAAACTTGCAGTCTCCTGGCAGAAATCCTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR GCA 72 bp AATGGCCAGGCCAGTTGGCAAGTGCACGAGTCCAGCTaGATCTGTGTAAGGAGCTTGGCATCTCAGAGCTGG +
Preference number: 3 (lower is better)
Translates to: NGQASWQVHESS*ICVRSLASQSW
Trigger: CCAGCTCTGAGATGCCAAGCTCCTTACACAGATGCAGCTGGACTCGTGCACTTGCCAACTGGCCTGGCCATT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR GCA 72 bp ACCTCCCCTGAGCAGCCAGGATTTCTGCCAGGAGACTaGAAGTTTGGACTTGAACTGCAAGTCCTCACCGGG +
Preference number: 3 (lower is better)
Translates to: TSPEQPGFLPGD*KFGLELQVLTG
Trigger: CCCGGTGAGGACTTGCAGTTCAAGTCCAAACTTGCAGTCTCCTGGCAGAAATCCTGGCTGCTCAGGGGAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR GCA 72 bp CTGACTCCAACTGCCTGGGAGATCCTGAGTGAGAACTaGCTTGCTGAGCCCAGCCAACCCCTAAAGCTGTCA +
Preference number: 3 (lower is better)
Translates to: LTPTAWEILSEN*LAEPSQPLKLS
Trigger: TGACAGCTTTAGGGGTTGGCTGGGCTCAGCAAGGCAGTTCTCACTCAGGATCTCCCAGGCAGTTGGAGTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR CCA 72 bp ACTGGTGGGGCTGGGAGGACATCATTGACTCACCCATaGGACAAGAAAGAGGGTAGAGGATGGGCACAGTGG +
Preference number: 3 (lower is better)
Translates to: TGGAGRTSLTHP*DKKEGRGWAQW
Trigger: CCACTGTGCCCATCCTCTACCCTCTTTCTTGTCCCATGGGTGAGTCAATGATGTCCTCCCAGCCCCACCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR CCA 72 bp GCACCTGCCCAGTTCCTATTCACTCATCTGCATGCCTaGAACCCAAAGAGCAAAAGCAGCCCTGGTGAGGGC +
Preference number: 3 (lower is better)
Translates to: APAQFLFTHLHA*NPKSKSSPGEG
Trigger: GCCCTCACCAGGGCTGCTTTTGCTCTTTGGGTTCCAGGCATGCAGATGAGTGAATAGGAACTGGGCAGGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR CCA 72 bp GCTTGCTTGGCCCTGACAGTGGGCTGGAGAACACGTTaGCTCCAGAATGTTCTCTATCCTCTTTCCAGGGGC +
Preference number: 3 (lower is better)
Translates to: ACLALTVGWRTR*LQNVLYPLSRG
Trigger: GCCCCTGGAAAGAGGATAGAGAACATTCTGGAGCCAACGTGTTCTCCAGCCCACTGTCAGGGCCAAGCAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR CCA 72 bp GGAGAGCAGTCAACGCATGGGGACAGTCCCCACACCTaGAAGGACATGAGTGAGGAGGTGCAATTGATGGGT +
Preference number: 3 (lower is better)
Translates to: GEQSTHGDSPHT*KDMSEEVQLMG
Trigger: ACCCATCAATTGCACCTCCTCACTCATGTCCTTCCAGGTGTGGGGACTGTCCCCATGCGTTGACTGCTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000533854.6
ENST00000673855.1
3UTR-3UTR CAA 90 bp GCTGGAGAACACGTTGGCTCCAGAATGTTCTCTATCCTCTTTCCAGGGGCAGGCTCCCAGACAATCAGCTaGCCCACAGACTCCAGACTC +
Preference number: 3 (lower is better)
Translates to: AGEHVGSRMFSILFPGAGSQTIS*PTDSRL
Trigger: GAGTCTGGAGTCTGTGGGCAAGCTGATTGTCTGGGA...GCCTGCCCCTGGAAAGAGGATAGAGAACATTCTGGAGCCAACGTGTTCTCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR TCA 72 bp CACACACCAGAAGGTGGAGGCAGGCCCAGAAGGATGTaGTATGTCCAAGGTCACAGAGCAGAGGTCCAGGAT +
Preference number: 3 (lower is better)
Translates to: HTPEGGGRPRRM*YVQGHRAEVQD
Trigger: ATCCTGGACCTCTGCTCTGTGACCTTGGACATATCACATCCTTCTGGGCCTGCCTCCACCTTCTGGTGTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR TCA 72 bp TTATCATCCCTGCTTGCATCCCTGCTTGCTTGGCCCTaGCAGTGGGCTGGAGAACACGTTGGCTCCAGAATG +
Preference number: 3 (lower is better)
Translates to: LSSLLASLLAWP*QWAGEHVGSRM
Trigger: CATTCTGGAGCCAACGTGTTCTCCAGCCCACTGTCAGGGCCAAGCAAGCAGGGATGCAAGCAGGGATGATAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR GCA 72 bp GCAAGTCCTCACCGGGTCTCCAGCCCAACCAGCCTCTaGCATCAGATTTTGGTTGTACTCACCAAGTCTCCA +
Preference number: 3 (lower is better)
Translates to: ASPHRVSSPTSL*HQILVVLTKSP
Trigger: TGGAGACTTGGTGAGTACAACCAAAATCTGATGGCAGAGGCTGGTTGGGCTGGAGACCCGGTGAGGACTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR GCA 72 bp GATTTCTGCCAGGAGACTGCAAGTTTGGACTTGAACTaGAAGTCCTCACCGGGTCTCCAGCCCAACCAGCCT +
Preference number: 3 (lower is better)
Translates to: DFCQETASLDLN*KSSPGLQPNQP
Trigger: AGGCTGGTTGGGCTGGAGACCCGGTGAGGACTTGCAGTTCAAGTCCAAACTTGCAGTCTCCTGGCAGAAATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR GCA 72 bp CTAGAGGGGCACCTGCCCAGTTCCTATTCACTCATCTaGATGCCTGGAACCCAAAGAGCAAAAGCAGCCCTG +
Preference number: 3 (lower is better)
Translates to: LEGHLPSSYSLI*MPGTQRAKAAL
Trigger: CAGGGCTGCTTTTGCTCTTTGGGTTCCAGGCATGCAGATGAGTGAATAGGAACTGGGCAGGTGCCCCTCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR CCA 72 bp ACCTTTCGGCCAGATGGTGCAGATCTTGAATGTGAATaGCCAGGCCAGTTGGCAAGTGCACGAGTCCAGCTG +
Preference number: 3 (lower is better)
Translates to: TFRPDGADLECE*PGQLASARVQL
Trigger: CAGCTGGACTCGTGCACTTGCCAACTGGCCTGGCCATTCACATTCAAGATCTGCACCATCTGGCCGAAAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR CCA 72 bp CTCCCCCGGCCTCCGCTGTCCTTTCTCCACTTACAATaGTTAGTTTTACATGTCAGTGTGGCTGGGCCATGG +
Preference number: 3 (lower is better)
Translates to: LPRPPLSFLHLQ*LVLHVSVAGPW
Trigger: CCATGGCCCAGCCACACTGACATGTAAAACTAACCATTGTAAGTGGAGAAAGGACAGCGGAGGCCGGGGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR CCA 72 bp GCTTGCATCCCTGCTTGCTTGGCCCTGACAGTGGGCTaGAGAACACGTTGGCTCCAGAATGTTCTCTATCCT +
Preference number: 3 (lower is better)
Translates to: ACIPACLALTVG*RTRWLQNVLYP
Trigger: AGGATAGAGAACATTCTGGAGCCAACGTGTTCTCCAGCCCACTGTCAGGGCCAAGCAAGCAGGGATGCAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR-3UTR CAA 90 bp CTGATGAGAACTCAGGCCTCTGAACCAGCAGGACAGAGAGCCCACGCATGCAAAGGAGAAAGTCAAGACTaGGAGAGCTGCCAATTGGCC +
Preference number: 3 (lower is better)
Translates to: LMRTQASEPAGQRAHACKGESQD*ESCQLA
Trigger: GGCCAATTGGCAGCTCTCCAAGTCTTGACTTTCTCC...TTTGCATGCGTGGGCTCTCTGTCCTGCTGGTTCAGAGGCCTGAGTTCTCATCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR TCA 72 bp GCTTGCAGTGGCTTCTGTGGACTTACGGAGGGTAATTaGAACCCTCCTGGCTCCGGTTTCCCACCAGAAGAA +
Preference number: 3 (lower is better)
Translates to: ACSGFCGLTEGN*NPPGSGFPPEE
Trigger: TTCTTCTGGTGGGAAACCGGAGCCAGGAGGGTTTCAATTACCCTCCGTAAGTCCACAGAAGCCACTGCAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR TCA 72 bp TCCTCTTTCCAGGGGCAGGCTCTAGCTGCATACCAGTaGATACCAGTGAATACCAGCTCCTTGGGGAAAGGG +
Preference number: 3 (lower is better)
Translates to: SSFQGQALAAYQ*IPVNTSSLGKG
Trigger: CCCTTTCCCCAAGGAGCTGGTATTCACTGGTATTCACTGGTATGCAGCTAGAGCCTGCCCCTGGAAAGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR GCA 72 bp GGCAGCCTTCGGAGAGCAGCTGGATTATTCCAAGTCTaGCTTTGTTTGCACTCAAGCTGCACCAGGTGTCCT +
Preference number: 3 (lower is better)
Translates to: GSLRRAAGLFQV*LCLHSSCTRCP
Trigger: AGGACACCTGGTGCAGCTTGAGTGCAAACAAAGGCAGACTTGGAATAATCCAGCTGCTCTCCGAAGGCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR GCA 72 bp CAAGCCAAGGACAGAGGCCTCAGAAGAAACCAATCCTaGCAACACCGTGATCTTGGACTCCGGTACCCAGAA +
Preference number: 3 (lower is better)
Translates to: QAKDRGLRRNQS*QHRDLGLRYPE
Trigger: TTCTGGGTACCGGAGTCCAAGATCACGGTGTTGGCAGGATTGGTTTCTTCTGAGGCCTCTGTCCTTGGCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR GCA 72 bp AAAATCCAGGCAGCTGGTGAAGGAACAGAGCCCAGGTaGCAATTTGCTCAGGCCTTAGGTGGAATGTGGCTC +
Preference number: 3 (lower is better)
Translates to: KIQAAGEGTEPR*QFAQALGGMWL
Trigger: GAGCCACATTCCACCTAAGGCCTGAGCAAATTGGCACCTGGGCTCTGTTCCTTCACCAGCTGCCTGGATTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR CCA 72 bp TGGGCTTGGAAACCATTTAGGCCAAGCCCCTCAGAGTaGAAGGGTGTTGCCCAAGGATTCGTGGTGAATGAG +
Preference number: 3 (lower is better)
Translates to: WAWKPFRPSPSE*KGVAQGFVVNE
Trigger: CTCATTCACCACGAATCCTTGGGCAACACCCTTCCACTCTGAGGGGCTTGGCCTAAATGGTTTCCAAGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR TCA 72 bp GGGCTCCTTCATTTAGCAGCTCAGCATCAGGGCCAGTaGAGACCGAACCTAGTGATGTCTGAGTCCACAATC +
Preference number: 3 (lower is better)
Translates to: GLLHLAAQHQGQ*RPNLVMSESTI
Trigger: GATTGTGGACTCAGACATCACTAGGTTCGGTCTTCACTGGCCCTGATGCTGAGCTGCTAAATGAAGGAGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR TCA 72 bp GGATGCAATTGCCACACCAATGAGCAGGGAAGCCTTTaGAATGACAGCCACTGTCTGACTCCAACTGCCTGG +
Preference number: 3 (lower is better)
Translates to: GCNCHTNEQGSL*NDSHCLTPTAW
Trigger: CCAGGCAGTTGGAGTCAGACAGTGGCTGTCATTTCAAAGGCTTCCCTGCTCATTGGTGTGGCAATTGCATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR TCA 72 bp TCCAGAACAAGAGTGTGGCGAGGTTCCACCACGGGCTaGCCACAGTTAGGAAAATCCAGAGTTTTCCTGGAG +
Preference number: 3 (lower is better)
Translates to: SRTRVWRGSTTG*PQLGKSRVFLE
Trigger: CTCCAGGAAAACTCTGGATTTTCCTAACTGTGGTCAGCCCGTGGTGGAACCTCGCCACACTCTTGTTCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR GCA 72 bp CCAGAAACATTCCAAACTCTTCCCCAACCAGAGACATaGCAGCCCCGAGATAACCTTCCCTCCAACCAGAGA +
Preference number: 3 (lower is better)
Translates to: PETFQTLPQPET*QPRDNLPSNQR
Trigger: TCTCTGGTTGGAGGGAAGGTTATCTCGGGGCTGGCATGTCTCTGGTTGGGGAAGAGTTTGGAATGTTTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR CCA 72 bp ATGGTGCAGATCTTGAATGTGAATGGCCAGGCCAGTTaGCAAGTGCACGAGTCCAGCTGCATCTGTGTAAGG +
Preference number: 3 (lower is better)
Translates to: MVQILNVNGQAS*QVHESSCICVR
Trigger: CCTTACACAGATGCAGCTGGACTCGTGCACTTGCCAACTGGCCTGGCCATTCACATTCAAGATCTGCACCAT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR CCA 72 bp CCAATTAATCGGGGATGGACCCGAATCCAATCTGACTaGTGTCCTTGGACACCAGGAGAGGGAATGTGGACA +
Preference number: 3 (lower is better)
Translates to: PINRGWTRIQSD*CPWTPGEGMWT
Trigger: TGTCCACATTCCCTCTCCTGGTGTCCAAGGACACCAGTCAGATTGGATTCGGGTCCATCCCCGATTAATTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR CCA 72 bp GTTGCCCAAGGATTCGTGGTGAATGAGTGGCTGAATTaGGACCAGAACTGGCTTCTCTTACCCTTCTCCTCC +
Preference number: 3 (lower is better)
Translates to: VAQGFVVNEWLN*DQNWLLLPFSS
Trigger: GGAGGAGAAGGGTAAGAGAAGCCAGTTCTGGTCCCAATTCAGCCACTCATTCACCACGAATCCTTGGGCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR CCA 72 bp TGGAAGGGTGTTGCCCAAGGATTCGTGGTGAATGAGTaGCTGAATTGGGACCAGAACTGGCTTCTCTTACCC +
Preference number: 3 (lower is better)
Translates to: WKGVAQGFVVNE*LNWDQNWLLLP
Trigger: GGGTAAGAGAAGCCAGTTCTGGTCCCAATTCAGCCACTCATTCACCACGAATCCTTGGGCAACACCCTTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR CCA 72 bp GGGTCTCCAGCCCAACCAGCCTCTGCCATCAGATTTTaGTTGTACTCACCAAGTCTCCACAACTTCTTGAGC +
Preference number: 3 (lower is better)
Translates to: GSPAQPASAIRF*LYSPSLHNFLS
Trigger: GCTCAAGAAGTTGTGGAGACTTGGTGAGTACAACCAAAATCTGATGGCAGAGGCTGGTTGGGCTGGAGACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR CCA 72 bp TGTGGGGAGAAAGTCAAGACTTGGAGAGCTGCCAATTaGCCCTCATACCCAAAATCCAGGCAGCTGGTGAAG +
Preference number: 3 (lower is better)
Translates to: CGEKVKTWRAAN*PSYPKSRQLVK
Trigger: CTTCACCAGCTGCCTGGATTTTGGGTATGAGGGCCAATTGGCAGCTCTCCAAGTCTTGACTTTCTCCCCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR-3UTR CAA 90 bp AGGACTGTAGGTGCCATGCTCTTGGGGGTGCACTTGAAACAGGACTTGCAGAGCACATTCTTTGGAGTGTaGTCATCTGGGTGCCTCCAT +
Preference number: 3 (lower is better)
Translates to: RTVGAMLLGVHLKQDLQSTFFGV*SSGCLH
Trigger: ATGGAGGCACCCAGATGACAACACTCCAAAGAATGT...GCTCTGCAAGTCCTGTTTCAAGTGCACCCCCAAGAGCATGGCACCTACAGTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR-3UTR CAA 90 bp AGGACTGTAGGTGCCATGCTCTTGGGGGTGCACTTGAAACAGGACTTGCAGAGCTTTCTTGCATTTTGTTaGGGATGCCACCACTCCCCA +
Preference number: 3 (lower is better)
Translates to: RTVGAMLLGVHLKQDLQSFLAFC*GCHHSP
Trigger: TGGGGAGTGGTGGCATCCCAAACAAAATGCAAGAAA...GCTCTGCAAGTCCTGTTTCAAGTGCACCCCCAAGAGCATGGCACCTACAGTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR TCA 72 bp CAGAGGCCTCAGAAGAAACCAATCCTGCCAACACCGTaGTCTTGGACTCCGGTACCCAGAACTGTAGGAAAA +
Preference number: 3 (lower is better)
Translates to: QRPQKKPILPTP*SWTPVPRTVGK
Trigger: TTTTCCTACAGTTCTGGGTACCGGAGTCCAAGATCACGGTGTTGGCAGGATTGGTTTCTTCTGAGGCCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR GCA 72 bp GGATTATTCCAAGTCTGCCTTTGTTTGCACTCAAGCTaGACCAGGTGTCCTCAAATCCAGCTCCCACTCCCA +
Preference number: 3 (lower is better)
Translates to: GLFQVCLCLHSS*TRCPQIQLPLP
Trigger: TGGGAGTGGGAGCTGGATTTGAGGACACCTGGTGCAGCTTGAGTGCAAACAAAGGCAGACTTGGAATAATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR-3UTR CAA 90 bp GACACATGCACCCACCCCCAAACAGGTAATGACCGAGAACCTGTTCCTAAGATGAGGAACACTGACAGCTaGACATGTCTAAGTCAGCCA +
Preference number: 3 (lower is better)
Translates to: DTCTHPQTGNDREPVPKMRNTDS*TCLSQP
Trigger: TGGCTGACTTAGACATGTCAAGCTGTCAGTGTTCCT...CATCTTAGGAACAGGTTCTCGGTCATTACCTGTTTGGGGGTGGGTGCATGTGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR-3UTR CAA 90 bp GGGGTGCACTTGAAACAGGACTTGCAGAGCAGAGCAGTGCAAATATTACCAGCTTTGGAGAGCTGCCAATaGGCCCTCATACCCAAAATC +
Preference number: 3 (lower is better)
Translates to: GVHLKQDLQSRAVQILPALESCQ*ALIPKI
Trigger: GATTTTGGGTATGAGGGCCAATTGGCAGCTCTCCAA...AGCTGGTAATATTTGCACTGCTCTGCTCTGCAAGTCCTGTTTCAAGTGCACCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR TCA 72 bp AATGGGTGTCACACTGCCTGGTCTTCTGGAAAAATCTaGTTTGCCCACATCTGTCCTACACCCAGGAAGCAG +
Preference number: 3 (lower is better)
Translates to: NGCHTAWSSGKI*FAHICPTPRKQ
Trigger: CTGCTTCCTGGGTGTAGGACAGATGTGGGCAAATCAGATTTTTCCAGAAGACCAGGCAGTGTGACACCCATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR CCA 72 bp AAGTGGTTCACTGAGTGTGGGGAGAAAGTCAAGACTTaGAGAGCTGCCAATTGGCCCTCATACCCAAAATCC +
Preference number: 3 (lower is better)
Translates to: KWFTECGEKVKT*RAANWPSYPKS
Trigger: GGATTTTGGGTATGAGGGCCAATTGGCAGCTCTCCAAGTCTTGACTTTCTCCCCACACTCAGTGAACCACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR-3UTR CAA 90 bp TATGAGGAAGACCAGGCCTTAAGAAGAGACCGTGTGCAAAGATGTTCTAGTGACCAGATGGTGCAGATCTaGAATGTGAATGGCCAGGCC +
Preference number: 3 (lower is better)
Translates to: YEEDQALRRDRVQRCSSDQMVQI*NVNGQA
Trigger: GGCCTGGCCATTCACATTCAAGATCTGCACCATCTG...GTCACTAGAACATCTTTGCACACGGTCTCTTCTTAAGGCCTGGTCTTCCTCATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR-3UTR CAA 90 bp GCTGGAGAACACGTTGGCTCCAGAATGTTCTCTATCCTCTTTCCAGGGGCAGGCGAGTCCACAATCAACTaGTATTTAGGAGTGGATTCT +
Preference number: 3 (lower is better)
Translates to: AGEHVGSRMFSILFPGAGESTIN*YLGVDS
Trigger: AGAATCCACTCCTAAATACAAGTTGATTGTGGACTC...GCCTGCCCCTGGAAAGAGGATAGAGAACATTCTGGAGCCAACGTGTTCTCCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR TCA 72 bp GTTACTCAAACATTAAGGAGGGGTGCCCCCTACATGTaGTTCTCTAGGGACATCACTGATAAGCCTGTGGCA +
Preference number: 3 (lower is better)
Translates to: VTQTLRRGAPYM*FSRDITDKPVA
Trigger: TGCCACAGGCTTATCAGTGATGTCCCTAGAGAATCACATGTAGGGGGCACCCCTCCTTAATGTTTGAGTAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR TCA 72 bp TTCCAAGTGTCACACGAGCATATGAAAGTGGTTCACTaGGTGTGGGGAGAAAGTCAAGACTTGGAGAGCTGC +
Preference number: 3 (lower is better)
Translates to: FQVSHEHMKVVH*VWGESQDLESC
Trigger: GCAGCTCTCCAAGTCTTGACTTTCTCCCCACACTCAGTGAACCACTTTCATATGCTCGTGTGACACTTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR TCA 72 bp GATCCCATCTCTCATGTGTTCCTCACAATGGAACTCTaGCACTCCTCACATCTGAGATGGTGGGATCTACGT +
Preference number: 3 (lower is better)
Translates to: DPISHVFLTMEL*HSSHLRWWDLR
Trigger: ACGTAGATCCCACCATCTCAGATGTGAGGAGTGTCAGAGTTCCATTGTGAGGAACACATGAGAGATGGGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR GCA 72 bp CCTCCAACTGTCTCCCCACTGCTACTGCCAGCCATGTaGACTCCATTATGCATAAATCTTATTCTTCCTTGG +
Preference number: 3 (lower is better)
Translates to: PPTVSPLLLPAM*TPLCINLILPW
Trigger: CCAAGGAAGAATAAGATTTATGCATAATGGAGTGCACATGGCTGGCAGTAGCAGTGGGGAGACAGTTGGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR GCA 72 bp GAGACTATGAGATCATTTCTAAGGATTTATCATCCCTaGTTGCATCCCTGCTTGCTTGGCCCTGACAGTGGG +
Preference number: 3 (lower is better)
Translates to: ETMRSFLRIYHP*LHPCLLGPDSG
Trigger: CCCACTGTCAGGGCCAAGCAAGCAGGGATGCAAGCAGGGATGATAAATCCTTAGAAATGATCTCATAGTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR CCA 72 bp CCAGGCAGCCTCTTCGAAGGCAACCTTCCACTTAGGTaGTTTAGACAGATGTCTACAAGATTCCATCTTAGG +
Preference number: 3 (lower is better)
Translates to: PGSLFEGNLPLR*FRQMSTRFHLR
Trigger: CCTAAGATGGAATCTTGTAGACATCTGTCTAAACCACCTAAGTGGAAGGTTGCCTTCGAAGAGGCTGCCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR TCA 72 bp GCATCAGGGCCAGTGAAGACCGAACCTAGTGATGTCTaGGTCCACAATCAACTTGTATTTAGGAGTGGATTC +
Preference number: 3 (lower is better)
Translates to: ASGPVKTEPSDV*VHNQLVFRSGF
Trigger: GAATCCACTCCTAAATACAAGTTGATTGTGGACTCAGACATCACTAGGTTCGGTCTTCACTGGCCCTGATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR TCA 72 bp GACCGTGTGCAAAGATGTTCTAGTGACAACCTTAGCTaGAGTCTCAGTGGATGCAATTGCCACACCAATGAG +
Preference number: 3 (lower is better)
Translates to: DRVQRCSSDNLS*SLSGCNCHTNE
Trigger: CTCATTGGTGTGGCAATTGCATCCACTGAGACTTCAGCTAAGGTTGTCACTAGAACATCTTTGCACACGGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR GCA 72 bp GTCATGGTACAGCAGATCGTGTTTCTCAAAGGTGGTTaGTACCATAGATCCCATCTCTCATGTGTTCCTCAC +
Preference number: 3 (lower is better)
Translates to: VMVQQIVFLKGG*YHRSHLSCVPH
Trigger: GTGAGGAACACATGAGAGATGGGATCTATGGTAGCAACCACCTTTGAGAAACACGATCTGCTGTACCATGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR-3UTR CAA 90 bp TTATTCTTCCTTGGGGTGCTGCAAGTATCTGATCTCTTAGCTAAATTCCACATTATCTGTGTAAGGAGCTaGGCATCTCAGAGCTGGCCC +
Preference number: 3 (lower is better)
Translates to: LFFLGVLQVSDLLAKFHIICVRS*ASQSWP
Trigger: GGGCCAGCTCTGAGATGCCAAGCTCCTTACACAGAT...AATGTGGAATTTAGCTAAGAGATCAGATACTTGCAGCACCCCAAGGAAGAATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR TCA 72 bp GGGCCTTGCAGTTGCTATCAGTTTATAGGCAAGGATTaGAAAGTCACATACAAAAGCAACAGAGAGCCTCCC +
Preference number: 3 (lower is better)
Translates to: GPCSCYQFIGKD*KVTYKSNREPP
Trigger: GGGAGGCTCTCTGTTGCTTTTGTATGTGACTTTTCAATCCTTGCCTATAAACTGATAGCAACTGCAAGGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR TCA 72 bp AAAGGCAGGTTAACTTCCAAGTGTCACACGAGCATATaGAAGTGGTTCACTGAGTGTGGGGAGAAAGTCAAG +
Preference number: 3 (lower is better)
Translates to: KGRLTSKCHTSI*KWFTECGEKVK
Trigger: CTTGACTTTCTCCCCACACTCAGTGAACCACTTTCATATGCTCGTGTGACACTTGGAAGTTAACCTGCCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR-3UTR CAA 90 bp TCTGAGTTGAGTTTGTACATGTTAACGTTTGGTAAAAGTCTCCTGATTGAGGAGCAAGTCTGCCTTTGTTaGCACTCAAGCTGCACCAGG +
Preference number: 3 (lower is better)
Translates to: SELSLYMLTFGKSLLIEEQVCLC*HSSCTR
Trigger: CCTGGTGCAGCTTGAGTGCAAACAAAGGCAGACTTG...CTCCTCAATCAGGAGACTTTTACCAAACGTTAACATGTACAAACTCAACTCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR-3UTR CAA 90 bp GGGGTGCACTTGAAACAGGACTTGCAGAGCAGAGCAGTGCAAATATTACCAGCTGAGGAGAACATGGTTTaGGTATTATTCTGTAAACAG +
Preference number: 3 (lower is better)
Translates to: GVHLKQDLQSRAVQILPAEENMV*VLFCKQ
Trigger: CTGTTTACAGAATAATACCAAAACCATGTTCTCCTC...AGCTGGTAATATTTGCACTGCTCTGCTCTGCAAGTCCTGTTTCAAGTGCACCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR TCA 72 bp TGTTCCTCACAATGGAACTCTGACACTCCTCACATCTaGGATGGTGGGATCTACGTTCTCTTCTCTATAAAC +
Preference number: 3 (lower is better)
Translates to: CSSQWNSDTPHI*DGGIYVLFSIN
Trigger: GTTTATAGAGAAGAGAACGTAGATCCCACCATCTCAGATGTGAGGAGTGTCAGAGTTCCATTGTGAGGAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR GCA 72 bp ATCTTGATAGGATGTTTGGAATCACTGTTGCCATCTTaGTACCCACTCGTGGATAAAGGCAGCAGAATTCTG +
Preference number: 3 (lower is better)
Translates to: ILIGCLESLLPS*YPLVDKGSRIL
Trigger: CAGAATTCTGCTGCCTTTATCCACGAGTGGGTAGCAAGATGGCAACAGTGATTCCAAACATCCTATCAAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR TCA 72 bp ACACGCCAAACATGTTCCATGGCCAAACTTGTGTCATaGGTCTTTCTCCAGTTGCTTCAATTTATCCAGAAC +
Preference number: 3 (lower is better)
Translates to: TRQTCSMAKLVS*VFLQLLQFIQN
Trigger: GTTCTGGATAAATTGAAGCAACTGGAGAAAGACTCATGACACAAGTTTGGCCATGGAACATGTTTGGCGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR GCA 72 bp TTAGTTTTACATGTCAGTGTGGCTGGGCCATGGTGCTaGCCAAATATTTGGCCAAACATTTTTCTAACTGTC +
Preference number: 3 (lower is better)
Translates to: LVLHVSVAGPWC*PNIWPNIFLTV
Trigger: GACAGTTAGAAAAATGTTTGGCCAAATATTTGGGCAGCACCATGGCCCAGCCACACTGACATGTAAAACTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR GCA 72 bp TGGTTAGTTTTACATGTCAGTGTGGCTGGGCCATGGTaGTGCCCAAATATTTGGCCAAACATTTTTCTAACT +
Preference number: 3 (lower is better)
Translates to: WLVLHVSVAGPW*CPNIWPNIFLT
Trigger: AGTTAGAAAAATGTTTGGCCAAATATTTGGGCAGCACCATGGCCCAGCCACACTGACATGTAAAACTAACCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR GCA 72 bp ATTATGATGGAAATGACATCAGGTAACTTCAAAGGCTaGTTCCAGAAAGGCAATGAAGCTTCTGCCTGTCTC +
Preference number: 3 (lower is better)
Translates to: IMMEMTSGNFKG*FQKGNEASACL
Trigger: GAGACAGGCAGAAGCTTCATTGCCTTTCTGGAAGCAGCCTTTGAAGTTACCTGATGTCATTTCCATCATAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR GCA 72 bp CCACACACCCATCAACTCAGGAATTTACGCTTCCAGTaGTTCAGGAAACATTGTGAACAAATGAAACATCTC +
Preference number: 3 (lower is better)
Translates to: PHTHQLRNLRFQ*FRKHCEQMKHL
Trigger: GAGATGTTTCATTTGTTCACAATGTTTCCTGAAGCACTGGAAGCGTAAATTCCTGAGTTGATGGGTGTGTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533854.6
ENST00000673855.1
3UTR CCA 72 bp TTAGACAGATGTCTACAAGATTCCATCTTAGGGCCTTaGTCCGGAAATATTACCCTTGTAAGGGGACAGTAT +
Preference number: 3 (lower is better)
Translates to: LDRCLQDSILGP*SGNITLVRGQY
Trigger: ATACTGTCCCCTTACAAGGGTAATATTTCCGGACCAAGGCCCTAAGATGGAATCTTGTAGACATCTGTCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR CCA 72 bp CAATGGTTAGTTTTACATGTCAGTGTGGCTGGGCCATaGTGCTGCCCAAATATTTGGCCAAACATTTTTCTA +
Preference number: 3 (lower is better)
Translates to: QWLVLHVSVAGP*CCPNIWPNIFL
Trigger: TAGAAAAATGTTTGGCCAAATATTTGGGCAGCACCATGGCCCAGCCACACTGACATGTAAAACTAACCATTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR GCA 72 bp AACTTGTATTTAGGAGTGGATTCTACTTTTTCCAGGTaGACCAAAAACAAGCCTGGCACAGTGACAGAGAAA +
Preference number: 3 (lower is better)
Translates to: NLYLGVDSTFSR*TKNKPGTVTEK
Trigger: TTTCTCTGTCACTGTGCCAGGCTTGTTTTTGGTGCACCTGGAAAAAGTAGAATCCACTCCTAAATACAAGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR CCA 72 bp AATTGGAATAGCGCTTACCTAAATGATTGTCCAGTTTaGAAACGCTATCTGTCTCCAAGCACAAAAACTGAT +
Preference number: 3 (lower is better)
Translates to: NWNSAYLNDCPV*KRYLSPSTKTD
Trigger: ATCAGTTTTTGTGCTTGGAGACAGATAGCGTTTCCAAACTGGACAATCATTTAGGTAAGCGCTATTCCAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR CCA 72 bp ACCTTTCCTTCCCCCATTTATCTTTGGATGGGAACCTaGATTATTTCTCTGATTATAGAAGAGGGTACATTT +
Preference number: 3 (lower is better)
Translates to: TFPSPIYLWMGT*IISLIIEEGTF
Trigger: AAATGTACCCTCTTCTATAATCAGAGAAATAATCCAGGTTCCCATCCAAAGATAAATGGGGGAAGGAAAGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR TCA 90 bp CCTACACCGCTGGACTTTGGATTTCTAGCCTGGCAGCCACTGCCATCCCCTCCCAGGGGCTGCGGCCCCTaGCCCAGGCGTCTGGGTGTA +
Preference number: 4 (lower is better)
Translates to: PTPLDFGFLAWQPLPSPPRGCGP*PRRLGV
Trigger: TACACCCAGACGCCTGGGTCAGGGGCCGCAGCCCCT...GGGAGGGGATGGCAGTGGCTGCCAGGCTAGAAATCCAAAGTCCAGCGGTGTAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR GCA 90 bp TGGGCGGGGCTTCTCCCATGTTCCCAGACAATCAGCTTGCCCACAGACTCCAGATTGCGGCAGCCCGGCTaGCTGACACACCGCCTCTCC +
Preference number: 4 (lower is better)
Translates to: WAGLLPCSQTISLPTDSRLRQPG*LTHRLS
Trigger: GGAGAGGCGGTGTGTCAGGCAGCCGGGCTGCCGCAA...TCTGGAGTCTGTGGGCAAGCTGATTGTCTGGGAACATGGGAGAAGCCCCGCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR GCA 90 bp TACGAGGACACAGGACAACAGGTGTCAAGAACCCTGGCACCTACACCGCTGGACGGGGCGGGTCTCACCTaGCATGGCACACCCACTGGC +
Preference number: 4 (lower is better)
Translates to: YEDTGQQVSRTLAPTPLDGAGLT*HGTPTG
Trigger: GCCAGTGGGTGTGCCATGGCAGGTGAGACCCGCCCC...GTCCAGCGGTGTAGGTGCCAGGGTTCTTGACACCTGTTGTCCTGTGTCCTCGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533854.6
ENST00000673855.1
CDS-3UTR TCA 90 bp TACGAGGACACAGGACAACAGGTGTCAAGAACCCTGGCACCTACACCGCTGGACGCCAGTAGTCGGTGCTaGCCGCGATACCCAGGAGGC +
Preference number: 4 (lower is better)
Translates to: YEDTGQQVSRTLAPTPLDASSRC*PRYPGG
Trigger: GCCTCCTGGGTATCGCGGTCAGCACCGACTACTGGC...GTCCAGCGGTGTAGGTGCCAGGGTTCTTGACACCTGTTGTCCTGTGTCCTCGTA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533854.6
ENST00000673855.1
CDS-3UTR TCA 90 bp CCTACACCGCTGGACTTTGGATTTCTAGCCTGGCAGCCACTGCCATCCCCTCCCCATAGTCGGGGCACTTaGGCAAGGCGGGGTAGTTGC +
Preference number: 4 (lower is better)
Translates to: PTPLDFGFLAWQPLPSPPHSRGT*ARRGSC
Trigger: GCAACTACCCCGCCTTGCTCAAGTGCCCCGACTATG...GGGAGGGGATGGCAGTGGCTGCCAGGCTAGAAATCCAAAGTCCAGCGGTGTAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR GCA 90 bp CCTACACCGCTGGACTTTGGATTTCTAGCCTGGCAGCCACTGCCATCCCCTCCCCACCCACTGGCCATTTaGTCCATGGTGCCCTGGGAG +
Preference number: 4 (lower is better)
Translates to: PTPLDFGFLAWQPLPSPPHPLAI*SMVPWE
Trigger: CTCCCAGGGCACCATGGAGCAAATGGCCAGTGGGTG...GGGAGGGGATGGCAGTGGCTGCCAGGCTAGAAATCCAAAGTCCAGCGGTGTAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000533854.6
ENST00000673855.1
CDS-3UTR GCA 90 bp GCTGGAGAACACGTTGGCTCCAGAATGTTCTCTATCCTCTTTCCAGGGGCAGGCGGGGCGGGTCTCACCTaGCATGGCACACCCACTGGC +
Preference number: 4 (lower is better)
Translates to: AGEHVGSRMFSILFPGAGGAGLT*HGTPTG
Trigger: GCCAGTGGGTGTGCCATGGCAGGTGAGACCCGCCCC...GCCTGCCCCTGGAAAGAGGATAGAGAACATTCTGGAGCCAACGTGTTCTCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR CCA 90 bp AGGACTGTAGGTGCCATGCTCTTGGGGGTGCACTTGAAACAGGACTTGCAGAGCGCAGGGAGGCCTCGCTaGAGATGTCGGAGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: RTVGAMLLGVHLKQDLQSAGRPR*RCRRGC
Trigger: GCAGCCCCTCCGACATCTCCAGCGAGGCCTCCCTGC...GCTCTGCAAGTCCTGTTTCAAGTGCACCCCCAAGAGCATGGCACCTACAGTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR CCA 90 bp AGGGCCTTGGTCCGGAAATATTACCCTTGTAAGGGGACAGTATCCCCAGGACCACGCGACCCCCGACCCTaGTCCAATGTCCCTCGCCGG +
Preference number: 4 (lower is better)
Translates to: RALVRKYYPCKGTVSPGPRDPRP*SNVPRR
Trigger: CCGGCGAGGGACATTGGACCAGGGTCGGGGGTCGCG...TGGTCCTGGGGATACTGTCCCCTTACAAGGGTAATATTTCCGGACCAAGGCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR CAA 72 bp CAAGTGCACGAGTCCAGCTGCATCTGTGTAAGGAGCTaGGCATCTCAGAGCTGGCCCTGGCCCAGGGCCATG +
Preference number: 4 (lower is better)
Translates to: QVHESSCICVRS*ASQSWPWPRAM
Trigger: CATGGCCCTGGGCCAGGGCCAGCTCTGAGATGCCAAGCTCCTTACACAGATGCAGCTGGACTCGTGCACTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR CAA 72 bp CTCAGAGGCAGAAGGGCTGGGCATGAGCCCATGAATTaGGCGTCTTGCCCCAGGCACAGCCTTGTCGGAGGA +
Preference number: 4 (lower is better)
Translates to: LRGRRAGHEPMN*ASCPRHSLVGG
Trigger: TCCTCCGACAAGGCTGTGCCTGGGGCAAGACGCCAAATTCATGGGCTCATGCCCAGCCCTTCTGCCTCTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR TCA 90 bp AGGACTGTAGGTGCCATGCTCTTGGGGGTGCACTTGAAACAGGACTTGCAGAGCGCCAGTAGTCGGTGCTaGCCGCGATACCCAGGAGGC +
Preference number: 4 (lower is better)
Translates to: RTVGAMLLGVHLKQDLQSASSRC*PRYPGG
Trigger: GCCTCCTGGGTATCGCGGTCAGCACCGACTACTGGC...GCTCTGCAAGTCCTGTTTCAAGTGCACCCCCAAGAGCATGGCACCTACAGTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR GCA 90 bp ATGAGAACTCAGGCCTCTGAACCAGCAGGACAGAGAGCCCACGCATGCAAACCTCCGCCTCTCCAAGGCTaGGCACACCAGACGTGCAGC +
Preference number: 4 (lower is better)
Translates to: MRTQASEPAGQRAHACKPPPLQG*AHQTCS
Trigger: GCTGCACGTCTGGTGTGCGCAGCCTTGGAGAGGCGG...AGGTTTGCATGCGTGGGCTCTCTGTCCTGCTGGTTCAGAGGCCTGAGTTCTCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR CCA 90 bp CCTACACCGCTGGACTTTGGATTTCTAGCCTGGCAGCCACTGCCATCCCCTCCCCCATGGCACACCCACTaGCCATTTGCTCCATGGTGC +
Preference number: 4 (lower is better)
Translates to: PTPLDFGFLAWQPLPSPPPWHTH*PFAPWC
Trigger: GCACCATGGAGCAAATGGCCAGTGGGTGTGCCATGG...GGGAGGGGATGGCAGTGGCTGCCAGGCTAGAAATCCAAAGTCCAGCGGTGTAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000533854.6
ENST00000673855.1
CDS-3UTR CCA 90 bp GGTGGCGGGATGGTGTTTACGAGGACACAGGACAACAGGTGTCAAGAACCCTGGGCCAGTATCGTCCGGTaGGGACGGATGTGTCCGATG +
Preference number: 4 (lower is better)
Translates to: GGGMVFTRTQDNRCQEPWASIVR*GRMCPM
Trigger: CATCGGACACATCCGTCCCCACCGGACGATACTGGC...CCAGGGTTCTTGACACCTGTTGTCCTGTGTCCTCGTAAACACCATCCCGCCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533854.6
ENST00000673855.1
CDS-3UTR CCA 90 bp GGGGTGCACTTGAAACAGGACTTGCAGAGCAGAGCAGTGCAAATATTACCAGCTCCCACAGTCCAGGGATaGGGGCGGCCGAGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: GVHLKQDLQSRAVQILPAPTVQG*GRPRLS
Trigger: GCTGAGCCTCGGCCGCCCCCATCCCTGGACTGTGGG...AGCTGGTAATATTTGCACTGCTCTGCTCTGCAAGTCCTGTTTCAAGTGCACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR CCA 90 bp CAACAGAGAGCCTCCCACAGGAGGCTGAGTCATTGGAGTTGTGGGTGGGTGGGAACAGGAAGGGTTGTCTaGCCACCCACAGTCCAGGGA +
Preference number: 4 (lower is better)
Translates to: QQRASHRRLSHWSCGWVGTGRVV*PPTVQG
Trigger: TCCCTGGACTGTGGGTGGCCAGACAACCCTTCCTGT...TCCCACCCACCCACAACTCCAATGACTCAGCCTCCTGTGGGAGGCTCTCTGTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR CCA 90 bp AGGACTGTAGGTGCCATGCTCTTGGGGGTGCACTTGAAACAGGACTTGCAGAGCTGTCAACCACAGGCCTaGGGCTCAGGGGTCACCTGG +
Preference number: 4 (lower is better)
Translates to: RTVGAMLLGVHLKQDLQSCQPQA*GSGVTW
Trigger: CCAGGTGACCCCTGAGCCCCAGGCCTGTGGTTGACA...GCTCTGCAAGTCCTGTTTCAAGTGCACCCCCAAGAGCATGGCACCTACAGTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR CCA 90 bp GTGTCCTTGGACACCAGGAGAGGGAATGTGGACACACTGAGGGACACCAGGGACGAGCTGCTGGCTTCCTaGAGCCACTGCTGTGATTGG +
Preference number: 4 (lower is better)
Translates to: VSLDTRRGNVDTLRDTRDELLAS*SHCCDW
Trigger: CCAATCACAGCAGTGGCTCCAGGAAGCCAGCAGCTC...GTCCCTGGTGTCCCTCAGTGTGTCCACATTCCCTCTCCTGGTGTCCAAGGACAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR CCA 90 bp CCTACACCGCTGGACTTTGGATTTCTAGCCTGGCAGCCACTGCCATCCCCTCCCGCCTCGTCTCTTCTATaGCACACTGGAGCAGCCACT +
Preference number: 4 (lower is better)
Translates to: PTPLDFGFLAWQPLPSPPASSLL*HTGAAT
Trigger: AGTGGCTGCTCCAGTGTGCCATAGAAGAGACGAGGC...GGGAGGGGATGGCAGTGGCTGCCAGGCTAGAAATCCAAAGTCCAGCGGTGTAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR CCA 90 bp CCCAACCAGAGACATGCCAGCCCCGAGATAACCTTCCCTCCAACCAGAGAGATGCTGTCCTGGGAGACGTaGATGCTAGAGGGGCACCTG +
Preference number: 4 (lower is better)
Translates to: PNQRHASPEITFPPTREMLSWET*MLEGHL
Trigger: CAGGTGCCCCTCTAGCATCCACGTCTCCCAGGACAG...CATCTCTCTGGTTGGAGGGAAGGTTATCTCGGGGCTGGCATGTCTCTGGTTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR TCA 90 bp TGGGCGGGGCTTCTCCCATGTTCCCAGACAATCAGCTTGCCCACAGACTCCAGACAGCATCAGGGCCAGTaGAGACCGAACCTAGTGATG +
Preference number: 4 (lower is better)
Translates to: WAGLLPCSQTISLPTDSRQHQGQ*RPNLVM
Trigger: CATCACTAGGTTCGGTCTTCACTGGCCCTGATGCTG...TCTGGAGTCTGTGGGCAAGCTGATTGTCTGGGAACATGGGAGAAGCCCCGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR TCA 90 bp GGGGTGCACTTGAAACAGGACTTGCAGAGCAGAGCAGTGCAAATATTACCAGCTGGGGCTGGTGCAGGCTaGGACAGAGCGAGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: GVHLKQDLQSRAVQILPAGAGAG*DRARSG
Trigger: CCCACTCCTCGCTCTGTCTCAGCCTGCACCAGCCCC...AGCTGGTAATATTTGCACTGCTCTGCTCTGCAAGTCCTGTTTCAAGTGCACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR TCA 90 bp GGTGGCGGGATGGTGTTTACGAGGACACAGGACAACAGGTGTCAAGAACCCTGGCTGGGCATGAGCCCATaGATTTGGCGTCTTGCCCCA +
Preference number: 4 (lower is better)
Translates to: GGGMVFTRTQDNRCQEPWLGMSP*IWRLAP
Trigger: TGGGGCAAGACGCCAAATTCATGGGCTCATGCCCAG...CCAGGGTTCTTGACACCTGTTGTCCTGTGTCCTCGTAAACACCATCCCGCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR TCA 90 bp CAAGGGGGTGACAGATTGAAAGGAGTCCTTGGAGGTCGGGGAGAGCAGTCAACGTTCCTCCTCTCCAGCTaGAGGGCTTCAGAATGCCGG +
Preference number: 4 (lower is better)
Translates to: QGGDRLKGVLGGRGEQSTFLLSS*RASECR
Trigger: CCGGCATTCTGAAGCCCTTCAGCTGGAGAGGAGGAA...CGTTGACTGCTCTCCCCGACCTCCAAGGACTCCTTTCAATCTGTCACCCCCTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000533854.6
ENST00000673855.1
CDS-3UTR TCA 90 bp CAAGGGGGTGACAGATTGAAAGGAGTCCTTGGAGGTCGGGGAGAGCAGTCAACGTTCCTAGAGCAGCAGTaGGCAGAGTCCTTGGCAGGG +
Preference number: 4 (lower is better)
Translates to: QGGDRLKGVLGGRGEQSTFLEQQ*AESLAG
Trigger: CCCTGCCAAGGACTCTGCTCACTGCTGCTCTAGGAA...CGTTGACTGCTCTCCCCGACCTCCAAGGACTCCTTTCAATCTGTCACCCCCTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000533854.6
ENST00000673855.1
CDS-3UTR GCA 90 bp CCCAACCAGAGACATGCCAGCCCCGAGATAACCTTCCCTCCAACCAGAGAGATGCCCTGCTTGCATCCCTaGTTGCTTGGCCCTGACAGT +
Preference number: 4 (lower is better)
Translates to: PNQRHASPEITFPPTREMPCLHP*LLGPDS
Trigger: ACTGTCAGGGCCAAGCAAGCAGGGATGCAAGCAGGG...CATCTCTCTGGTTGGAGGGAAGGTTATCTCGGGGCTGGCATGTCTCTGGTTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR CCA 90 bp TACGAGGACACAGGACAACAGGTGTCAAGAACCCTGGCACCTACACCGCTGGACTCGGTGCTCTGGTTCTaGGGCACAATCACACCCTCC +
Preference number: 4 (lower is better)
Translates to: YEDTGQQVSRTLAPTPLDSVLWF*GTITPS
Trigger: GGAGGGTGTGATTGTGCCCCAGAACCAGAGCACCGA...GTCCAGCGGTGTAGGTGCCAGGGTTCTTGACACCTGTTGTCCTGTGTCCTCGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533854.6
ENST00000673855.1
CDS-3UTR CCA 90 bp AGAACCCTGGCACCTACACCGCTGGACTTTGGATTTCTAGCCTGGCAGCCACTGTCGGTGCTCTGGTTCTaGGGCACAATCACACCCTCC +
Preference number: 4 (lower is better)
Translates to: RTLAPTPLDFGFLAWQPLSVLWF*GTITPS
Trigger: GGAGGGTGTGATTGTGCCCCAGAACCAGAGCACCGA...CAGTGGCTGCCAGGCTAGAAATCCAAAGTCCAGCGGTGTAGGTGCCAGGGTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533854.6
ENST00000673855.1
CDS-3UTR CCA 90 bp CAAGGGGGTGACAGATTGAAAGGAGTCCTTGGAGGTCGGGGAGAGCAGTCAACGACAGCTAAGCATGGGTaGCCTGGGCCTGTCAACCAC +
Preference number: 4 (lower is better)
Translates to: QGGDRLKGVLGGRGEQSTTAKHG*PGPVNH
Trigger: GTGGTTGACAGGCCCAGGCCACCCATGCTTAGCTGT...CGTTGACTGCTCTCCCCGACCTCCAAGGACTCCTTTCAATCTGTCACCCCCTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR CCA 90 bp AGGGCCTTGGTCCGGAAATATTACCCTTGTAAGGGGACAGTATCCCCAGGACCATTGGCATCTCAGAGCTaGCCCTGGCCCAGGGCCATG +
Preference number: 4 (lower is better)
Translates to: RALVRKYYPCKGTVSPGPLASQS*PWPRAM
Trigger: CATGGCCCTGGGCCAGGGCCAGCTCTGAGATGCCAA...TGGTCCTGGGGATACTGTCCCCTTACAAGGGTAATATTTCCGGACCAAGGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR CCA 90 bp CTGATGAGAACTCAGGCCTCTGAACCAGCAGGACAGAGAGCCCACGCATGCAAATTCTGGACTACGTGCTaGAGCCCACGTGTCGCCACC +
Preference number: 4 (lower is better)
Translates to: LMRTQASEPAGQRAHACKFWTTC*SPRVAT
Trigger: GGTGGCGACACGTGGGCTCCAGCACGTAGTCCAGAA...TTTGCATGCGTGGGCTCTCTGTCCTGCTGGTTCAGAGGCCTGAGTTCTCATCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR CCA 90 bp CTGATGAGAACTCAGGCCTCTGAACCAGCAGGACAGAGAGCCCACGCATGCAAAGCCTGTGGCAACCTATaGATTTCCCCCACGCCCCCA +
Preference number: 4 (lower is better)
Translates to: LMRTQASEPAGQRAHACKACGNL*ISPTPP
Trigger: TGGGGGCGTGGGGGAAATCCATAGGTTGCCACAGGC...TTTGCATGCGTGGGCTCTCTGTCCTGCTGGTTCAGAGGCCTGAGTTCTCATCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR CCA 90 bp GGGTGGCGGGATGGTGTTTACGAGGACACAGGACAACAGGTGTCAAGAACCCTGGGGTCTCACCTGCCATaGCACACCCACTGGCCATTT +
Preference number: 4 (lower is better)
Translates to: GWRDGVYEDTGQQVSRTLGSHLP*HTHWPF
Trigger: AAATGGCCAGTGGGTGTGCCATGGCAGGTGAGACCC...CAGGGTTCTTGACACCTGTTGTCCTGTGTCCTCGTAAACACCATCCCGCCACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533854.6
ENST00000673855.1
3UTR CAA 72 bp GTGCGTTATTTAAGCCACTCAGTCTGTGGTAGTTCATaGCGGCAGCCCGGCTGCCTGACACACCGCCTCTCC +
Preference number: 4 (lower is better)
Translates to: VRYLSHSVCGSS*RQPGCLTHRLS
Trigger: GGAGAGGCGGTGTGTCAGGCAGCCGGGCTGCCGCAATGAACTACCACAGACTGAGTGGCTTAAATAACGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR TCA 90 bp CCTACACCGCTGGACTTTGGATTTCTAGCCTGGCAGCCACTGCCATCCCCTCCCTCCTCCACCCTGCTGTaGGACAAATGGAAGAATCCA +
Preference number: 4 (lower is better)
Translates to: PTPLDFGFLAWQPLPSPPSSTLL*DKWKNP
Trigger: TGGATTCTTCCATTTGTCTCACAGCAGGGTGGAGGA...GGGAGGGGATGGCAGTGGCTGCCAGGCTAGAAATCCAAAGTCCAGCGGTGTAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR TCA 90 bp ATGAGAACTCAGGCCTCTGAACCAGCAGGACAGAGAGCCCACGCATGCAAACCTCCTCCCACAGGAGGCTaGGTCATTGGAGTTGTGGGT +
Preference number: 4 (lower is better)
Translates to: MRTQASEPAGQRAHACKPPPTGG*VIGVVG
Trigger: ACCCACAACTCCAATGACTCAGCCTCCTGTGGGAGG...AGGTTTGCATGCGTGGGCTCTCTGTCCTGCTGGTTCAGAGGCCTGAGTTCTCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR TCA 90 bp CACCTGTGCACCTACTCCCTAGGCAGAGTGCTGTGTTCCAAAGGCAGGTTAACTACCTTAGCCCCACAGTaGGCACACAGGGAGTCCTGG +
Preference number: 4 (lower is better)
Translates to: HLCTYSLGRVLCSKGRLTTLAPQ*AHRESW
Trigger: CCAGGACTCCCTGTGTGCTCACTGTGGGGCTAAGGT...AGTTAACCTGCCTTTGGAACACAGCACTCTGCCTAGGGAGTAGGTGCACAGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR TCA 90 bp GGGTGGCGGGATGGTGTTTACGAGGACACAGGACAACAGGTGTCAAGAACCCTGGTAGGATGCATCAGATaGCCCCTAACCACACACGCC +
Preference number: 4 (lower is better)
Translates to: GWRDGVYEDTGQQVSRTLVGCIR*PLTTHA
Trigger: GGCGTGTGTGGTTAGGGGTCATCTGATGCATCCTAC...CAGGGTTCTTGACACCTGTTGTCCTGTGTCCTCGTAAACACCATCCCGCCACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533854.6
ENST00000673855.1
CDS-3UTR TCA 90 bp GGGTGGCGGGATGGTGTTTACGAGGACACAGGACAACAGGTGTCAAGAACCCTGTTCTCACCACCCAGGTaGATAGGGGCTCAGACAGAC +
Preference number: 4 (lower is better)
Translates to: GWRDGVYEDTGQQVSRTLFSPPR*IGAQTD
Trigger: GTCTGTCTGAGCCCCTATTCACCTGGGTGGTGAGAA...CAGGGTTCTTGACACCTGTTGTCCTGTGTCCTCGTAAACACCATCCCGCCACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533854.6
ENST00000673855.1
CDS-3UTR GCA 90 bp TGGGCGGGGCTTCTCCCATGTTCCCAGACAATCAGCTTGCCCACAGACTCCAGAATCTTCCTGGACCGTTaGTGTGCAACTAGTCGCCAC +
Preference number: 4 (lower is better)
Translates to: WAGLLPCSQTISLPTDSRIFLDR*CATSRH
Trigger: GTGGCGACTAGTTGCACAGCAACGGTCCAGGAAGAT...TCTGGAGTCTGTGGGCAAGCTGATTGTCTGGGAACATGGGAGAAGCCCCGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR GCA 90 bp CCCCTAACCACACACGCCAAACATGTTCCATGGCCAAACTTGTGTCATGAGTCTCCCCCGCTCCTCACCTaGAAGGAAGCAGACCCGCCA +
Preference number: 4 (lower is better)
Translates to: PLTTHAKHVPWPNLCHESPPLLT*KEADPP
Trigger: TGGCGGGTCTGCTTCCTTGCAGGTGAGGAGCGGGGG...AGACTCATGACACAAGTTTGGCCATGGAACATGTTTGGCGTGTGTGGTTAGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000533854.6
ENST00000673855.1
CDS-3UTR GCA 90 bp CAAGGGGGTGACAGATTGAAAGGAGTCCTTGGAGGTCGGGGAGAGCAGTCAACGCCGAGATCACACCACTaGACTGACAGAGCAGGAGCT +
Preference number: 4 (lower is better)
Translates to: QGGDRLKGVLGGRGEQSTPRSHH*TDRAGA
Trigger: AGCTCCTGCTCTGTCAGTGCAGTGGTGTGATCTCGG...CGTTGACTGCTCTCCCCGACCTCCAAGGACTCCTTTCAATCTGTCACCCCCTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR GCA 90 bp TGGGCGGGGCTTCTCCCATGTTCCCAGACAATCAGCTTGCCCACAGACTCCAGAGCATTTTGTTTGGGATaGCACCACTCCCCAGCCAGA +
Preference number: 4 (lower is better)
Translates to: WAGLLPCSQTISLPTDSRAFCLG*HHSPAR
Trigger: TCTGGCTGGGGAGTGGTGGCATCCCAAACAAAATGC...TCTGGAGTCTGTGGGCAAGCTGATTGTCTGGGAACATGGGAGAAGCCCCGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR CCA 90 bp CAAGGGGGTGACAGATTGAAAGGAGTCCTTGGAGGTCGGGGAGAGCAGTCAACGGGAGGGGAGTGGGCTTaGAAACCATTTAGGCCAAGC +
Preference number: 4 (lower is better)
Translates to: QGGDRLKGVLGGRGEQSTGGEWA*KPFRPS
Trigger: GCTTGGCCTAAATGGTTTCCAAGCCCACTCCCCTCC...CGTTGACTGCTCTCCCCGACCTCCAAGGACTCCTTTCAATCTGTCACCCCCTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR CCA 90 bp CCCAACCAGAGACATGCCAGCCCCGAGATAACCTTCCCTCCAACCAGAGAGATGGGTCACTGGTGGGGCTaGGAGGACATCATTGACTCA +
Preference number: 4 (lower is better)
Translates to: PNQRHASPEITFPPTREMGHWWG*EDIIDS
Trigger: TGAGTCAATGATGTCCTCCCAGCCCCACCAGTGACC...CATCTCTCTGGTTGGAGGGAAGGTTATCTCGGGGCTGGCATGTCTCTGGTTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR CCA 90 bp GACACATGCACCCACCCCCAAACAGGTAATGACCGAGAACCTGTTCCTAAGATGGGTGAGGGCTCTGACTaGCTCCAGCGTACCACCCTC +
Preference number: 4 (lower is better)
Translates to: DTCTHPQTGNDREPVPKMGEGSD*LQRTTL
Trigger: GAGGGTGGTACGCTGGAGCCAGTCAGAGCCCTCACC...CATCTTAGGAACAGGTTCTCGGTCATTACCTGTTTGGGGGTGGGTGCATGTGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR CCA 90 bp GGTGGCGGGATGGTGTTTACGAGGACACAGGACAACAGGTGTCAAGAACCCTGGTCACACACCAGAAGGTaGAGGCAGGCCCAGAAGGAT +
Preference number: 4 (lower is better)
Translates to: GGGMVFTRTQDNRCQEPWSHTRR*RQAQKD
Trigger: ATCCTTCTGGGCCTGCCTCCACCTTCTGGTGTGTGA...CCAGGGTTCTTGACACCTGTTGTCCTGTGTCCTCGTAAACACCATCCCGCCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR CCA 90 bp GGTGGCGGGATGGTGTTTACGAGGACACAGGACAACAGGTGTCAAGAACCCTGGTGGAGTGTTGTCATCTaGGTGCCTCCATCAGGAGGC +
Preference number: 4 (lower is better)
Translates to: GGGMVFTRTQDNRCQEPWWSVVI*VPPSGG
Trigger: GCCTCCTGATGGAGGCACCCAGATGACAACACTCCA...CCAGGGTTCTTGACACCTGTTGTCCTGTGTCCTCGTAAACACCATCCCGCCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR CCA 90 bp CCCAACCAGAGACATGCCAGCCCCGAGATAACCTTCCCTCCAACCAGAGAGATGAGGTGTCAAGAACCCTaGCACCTACACCGCTGGACT +
Preference number: 4 (lower is better)
Translates to: PNQRHASPEITFPPTREMRCQEP*HLHRWT
Trigger: AGTCCAGCGGTGTAGGTGCCAGGGTTCTTGACACCT...CATCTCTCTGGTTGGAGGGAAGGTTATCTCGGGGCTGGCATGTCTCTGGTTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR CCA 90 bp GGTGGCGGGATGGTGTTTACGAGGACACAGGACAACAGGTGTCAAGAACCCTGGAGGTGTCAAGAACCCTaGCACCTACACCGCTGGACT +
Preference number: 4 (lower is better)
Translates to: GGGMVFTRTQDNRCQEPWRCQEP*HLHRWT
Trigger: AGTCCAGCGGTGTAGGTGCCAGGGTTCTTGACACCT...CCAGGGTTCTTGACACCTGTTGTCCTGTGTCCTCGTAAACACCATCCCGCCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533854.6
ENST00000673855.1
CDS-3UTR CCA 90 bp AGGGCCTTGGTCCGGAAATATTACCCTTGTAAGGGGACAGTATCCCCAGGACCAAGTGAGCAGAGTCCTTaGCAGGGCCTGAGAGGGGTG +
Preference number: 4 (lower is better)
Translates to: RALVRKYYPCKGTVSPGPSEQSP*QGLRGV
Trigger: CACCCCTCTCAGGCCCTGCCAAGGACTCTGCTCACT...TGGTCCTGGGGATACTGTCCCCTTACAAGGGTAATATTTCCGGACCAAGGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR CCA 90 bp CCATTGGATTCCCATGCAACCCTGGGGAACACTGAATTTCTCACCACCCAGGTGAGTGAGCAGAGTCCTTaGCAGGGCCTGAGAGGGGTG +
Preference number: 4 (lower is better)
Translates to: PLDSHATLGNTEFLTTQVSEQSP*QGLRGV
Trigger: CACCCCTCTCAGGCCCTGCCAAGGACTCTGCTCACT...CACCTGGGTGGTGAGAAATTCAGTGTTCCCCAGGGTTGCATGGGAATCCAATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000533854.6
ENST00000673855.1
3UTR CAA 72 bp GAAGGATGTGCAGGATCCTCCCAAGGGGGTGACAGATaGAAAGGAGTCCTTGGAGGTCGGGGAGAGCAGTCA +
Preference number: 4 (lower is better)
Translates to: EGCAGSSQGGDR*KGVLGGRGEQS
Trigger: TGACTGCTCTCCCCGACCTCCAAGGACTCCTTTCAATCTGTCACCCCCTTGGGAGGATCCTGCACATCCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000533854.6
ENST00000673855.1
CDS-3UTR TCA 90 bp AGAACCCTGGCACCTACACCGCTGGACTTTGGATTTCTAGCCTGGCAGCCACTGAGTGCAGGGACATCTTaGTCTCGGTGCTCTGGTTCT +
Preference number: 4 (lower is better)
Translates to: RTLAPTPLDFGFLAWQPLSAGTS*SRCSGS
Trigger: AGAACCAGAGCACCGAGATCAAGATGTCCCTGCACT...CAGTGGCTGCCAGGCTAGAAATCCAAAGTCCAGCGGTGTAGGTGCCAGGGTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533854.6
ENST00000673855.1
CDS-3UTR TCA 90 bp AGGACTGTAGGTGCCATGCTCTTGGGGGTGCACTTGAAACAGGACTTGCAGAGCATCACACCACTGCACTaGCAGAGCAGGAGCTTCACC +
Preference number: 4 (lower is better)
Translates to: RTVGAMLLGVHLKQDLQSITPLH*QSRSFT
Trigger: GGTGAAGCTCCTGCTCTGTCAGTGCAGTGGTGTGAT...GCTCTGCAAGTCCTGTTTCAAGTGCACCCCCAAGAGCATGGCACCTACAGTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR TCA 90 bp AGAACCCTGGCACCTACACCGCTGGACTTTGGATTTCTAGCCTGGCAGCCACTGGGGAAGCCTTTGAAATaGCAGCCACTGTCTGACTCC +
Preference number: 4 (lower is better)
Translates to: RTLAPTPLDFGFLAWQPLGKPLK*QPLSDS
Trigger: GGAGTCAGACAGTGGCTGTCATTTCAAAGGCTTCCC...CAGTGGCTGCCAGGCTAGAAATCCAAAGTCCAGCGGTGTAGGTGCCAGGGTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR TCA 90 bp CCCAACCAGAGACATGCCAGCCCCGAGATAACCTTCCCTCCAACCAGAGAGATGTCTTGGGGGTGCACTTaGAACAGGACTTGCAGAGCA +
Preference number: 4 (lower is better)
Translates to: PNQRHASPEITFPPTREMSWGCT*NRTCRA
Trigger: TGCTCTGCAAGTCCTGTTTCAAGTGCACCCCCAAGA...CATCTCTCTGGTTGGAGGGAAGGTTATCTCGGGGCTGGCATGTCTCTGGTTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR TCA 90 bp CCTACACCGCTGGACTTTGGATTTCTAGCCTGGCAGCCACTGCCATCCCCTCCCTTTCTAAGGATCCACTaGGGAAGGATGTGCAGGATC +
Preference number: 4 (lower is better)
Translates to: PTPLDFGFLAWQPLPSPPFLRIH*GRMCRI
Trigger: GATCCTGCACATCCTTCCTCAGTGGATCCTTAGAAA...GGGAGGGGATGGCAGTGGCTGCCAGGCTAGAAATCCAAAGTCCAGCGGTGTAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533854.6
ENST00000673855.1
CDS-3UTR GCA 90 bp GGTGGCGGGATGGTGTTTACGAGGACACAGGACAACAGGTGTCAAGAACCCTGGATCTTCCTGGACCGTTaGTGTGCAACTAGTCGCCAC +
Preference number: 4 (lower is better)
Translates to: GGGMVFTRTQDNRCQEPWIFLDR*CATSRH
Trigger: GTGGCGACTAGTTGCACAGCAACGGTCCAGGAAGAT...CCAGGGTTCTTGACACCTGTTGTCCTGTGTCCTCGTAAACACCATCCCGCCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533854.6
ENST00000673855.1
CDS-3UTR GCA 90 bp CAAGGGGGTGACAGATTGAAAGGAGTCCTTGGAGGTCGGGGAGAGCAGTCAACGGCTTCCTGGAGCCACTaGTGTGATTGGCACTCACAT +
Preference number: 4 (lower is better)
Translates to: QGGDRLKGVLGGRGEQSTASWSH*CDWHSH
Trigger: ATGTGAGTGCCAATCACAGCAGTGGCTCCAGGAAGC...CGTTGACTGCTCTCCCCGACCTCCAAGGACTCCTTTCAATCTGTCACCCCCTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR GCA 90 bp GTGTCCTTGGACACCAGGAGAGGGAATGTGGACACACTGAGGGACACCAGGGACAGTTTGGACTTGAACTaGAAGTCCTCACCGGGTCTC +
Preference number: 4 (lower is better)
Translates to: VSLDTRRGNVDTLRDTRDSLDLN*KSSPGL
Trigger: GAGACCCGGTGAGGACTTGCAGTTCAAGTCCAAACT...GTCCCTGGTGTCCCTCAGTGTGTCCACATTCCCTCTCCTGGTGTCCAAGGACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR GCA 90 bp CCATTGGATTCCCATGCAACCCTGGGGAACACTGAATTTCTCACCACCCAGGTGGTGTTGTCATCTGGGTaGCTCCATCAGGAGGCAGGG +
Preference number: 4 (lower is better)
Translates to: PLDSHATLGNTEFLTTQVVLSSG*LHQEAG
Trigger: CCCTGCCTCCTGATGGAGGCACCCAGATGACAACAC...CACCTGGGTGGTGAGAAATTCAGTGTTCCCCAGGGTTGCATGGGAATCCAATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR GCA 90 bp CCATTGGATTCCCATGCAACCCTGGGGAACACTGAATTTCTCACCACCCAGGTGCCATTTGCTCCATGGTaGCCTGGGAGTCAGCCAGGA +
Preference number: 4 (lower is better)
Translates to: PLDSHATLGNTEFLTTQVPFAPW*PGSQPG
Trigger: TCCTGGCTGACTCCCAGGGCACCATGGAGCAAATGG...CACCTGGGTGGTGAGAAATTCAGTGTTCCCCAGGGTTGCATGGGAATCCAATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533854.6
ENST00000673855.1
CDS-3UTR CCA 90 bp TACGAGGACACAGGACAACAGGTGTCAAGAACCCTGGCACCTACACCGCTGGACGACTCGGATGTCAGCTaGGTGTTCATGGGCATCACA +
Preference number: 4 (lower is better)
Translates to: YEDTGQQVSRTLAPTPLDDSDVS*VFMGIT
Trigger: TGTGATGCCCATGAACACCCAGCTGACATCCGAGTC...GTCCAGCGGTGTAGGTGCCAGGGTTCTTGACACCTGTTGTCCTGTGTCCTCGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533854.6
ENST00000673855.1
CDS-3UTR CCA 90 bp AGGGCCTTGGTCCGGAAATATTACCCTTGTAAGGGGACAGTATCCCCAGGACCAAATGGCCAGGCCAGTTaGCAAGTGCACGAGTCCAGC +
Preference number: 4 (lower is better)
Translates to: RALVRKYYPCKGTVSPGPNGQAS*QVHESS
Trigger: GCTGGACTCGTGCACTTGCCAACTGGCCTGGCCATT...TGGTCCTGGGGATACTGTCCCCTTACAAGGGTAATATTTCCGGACCAAGGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR CCA 90 bp GGTGGCGGGATGGTGTTTACGAGGACACAGGACAACAGGTGTCAAGAACCCTGGAGGGAGGGAAGAGCATaGACAGGTGTGTCATGTGGA +
Preference number: 4 (lower is better)
Translates to: GGGMVFTRTQDNRCQEPWREGRA*TGVSCG
Trigger: TCCACATGACACACCTGTCCATGCTCTTCCCTCCCT...CCAGGGTTCTTGACACCTGTTGTCCTGTGTCCTCGTAAACACCATCCCGCCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR CCA 90 bp GTGTCCTTGGACACCAGGAGAGGGAATGTGGACACACTGAGGGACACCAGGGACCCTTCGGAGAGCAGCTaGATTATTCCAAGTCTGCCT +
Preference number: 4 (lower is better)
Translates to: VSLDTRRGNVDTLRDTRDPSESS*IIPSLP
Trigger: AGGCAGACTTGGAATAATCCAGCTGCTCTCCGAAGG...GTCCCTGGTGTCCCTCAGTGTGTCCACATTCCCTCTCCTGGTGTCCAAGGACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR CCA 90 bp AGAACCCTGGCACCTACACCGCTGGACTTTGGATTTCTAGCCTGGCAGCCACTGTCTGAAGGTCACTGGTaGGGCTGGGAGGACATCATT +
Preference number: 4 (lower is better)
Translates to: RTLAPTPLDFGFLAWQPLSEGHW*GWEDII
Trigger: AATGATGTCCTCCCAGCCCCACCAGTGACCTTCAGA...CAGTGGCTGCCAGGCTAGAAATCCAAAGTCCAGCGGTGTAGGTGCCAGGGTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR CCA 90 bp AGAACCCTGGCACCTACACCGCTGGACTTTGGATTTCTAGCCTGGCAGCCACTGCAGCCACTGCTACCATaGATGAACCCACACTCACAG +
Preference number: 4 (lower is better)
Translates to: RTLAPTPLDFGFLAWQPLQPLLP*MNPHSQ
Trigger: CTGTGAGTGTGGGTTCATCCATGGTAGCAGTGGCTG...CAGTGGCTGCCAGGCTAGAAATCCAAAGTCCAGCGGTGTAGGTGCCAGGGTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR CCA 90 bp GCAGAGCAGAGCAGTGCAAATATTACCAGCTGTGCGGTCATGAGCAAGTCCCTAGCCCTGACAGTGGGCTaGAGAACACGTTGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: AEQSSANITSCAVMSKSLALTVG*RTRWLQ
Trigger: CTGGAGCCAACGTGTTCTCCAGCCCACTGTCAGGGC...TAGGGACTTGCTCATGACCGCACAGCTGGTAATATTTGCACTGCTCTGCTCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR CCA 90 bp GGGTGGCGGGATGGTGTTTACGAGGACACAGGACAACAGGTGTCAAGAACCCTGCTCCAGCACTTTCCTTaGGGTCACGTTGGTAGGATG +
Preference number: 4 (lower is better)
Translates to: GWRDGVYEDTGQQVSRTLLQHFP*GHVGRM
Trigger: CATCCTACCAACGTGACCCCAAGGAAAGTGCTGGAG...CAGGGTTCTTGACACCTGTTGTCCTGTGTCCTCGTAAACACCATCCCGCCACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533854.6
ENST00000673855.1
CDS-3UTR CCA 90 bp CCATTGGATTCCCATGCAACCCTGGGGAACACTGAATTTCTCACCACCCAGGTGAGAGGGGTGGCGGGATaGTGTTTACGAGGACACAGG +
Preference number: 4 (lower is better)
Translates to: PLDSHATLGNTEFLTTQVRGVAG*CLRGHR
Trigger: CCTGTGTCCTCGTAAACACCATCCCGCCACCCCTCT...CACCTGGGTGGTGAGAAATTCAGTGTTCCCCAGGGTTGCATGGGAATCCAATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000533854.6
ENST00000673855.1
CDS-3UTR CCA 90 bp TACGAGGACACAGGACAACAGGTGTCAAGAACCCTGGCACCTACACCGCTGGACATTGAAAGGAGTCCTTaGAGGTCGGGGAGAGCAGTC +
Preference number: 4 (lower is better)
Translates to: YEDTGQQVSRTLAPTPLDIERSP*RSGRAV
Trigger: GACTGCTCTCCCCGACCTCCAAGGACTCCTTTCAAT...GTCCAGCGGTGTAGGTGCCAGGGTTCTTGACACCTGTTGTCCTGTGTCCTCGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533854.6
ENST00000673855.1
CDS-3UTR TCA 90 bp CACCTGTGCACCTACTCCCTAGGCAGAGTGCTGTGTTCCAAAGGCAGGTTAACTGGCAGGAGAATTGCTTaGGCCCAGGAAGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: HLCTYSLGRVLCSKGRLTGRRIA*AQEAEV
Trigger: AACCTCTGCTTCCTGGGCTCAAGCAATTCTCCTGCC...AGTTAACCTGCCTTTGGAACACAGCACTCTGCCTAGGGAGTAGGTGCACAGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR TCA 90 bp GACACATGCACCCACCCCCAAACAGGTAATGACCGAGAACCTGTTCCTAAGATGCCAGTACCAAGGACATaGGGCCCTAGCACCTGTCCT +
Preference number: 4 (lower is better)
Translates to: DTCTHPQTGNDREPVPKMPVPRT*GPSTCP
Trigger: AGGACAGGTGCTAGGGCCTCATGTCCTTGGTACTGG...CATCTTAGGAACAGGTTCTCGGTCATTACCTGTTTGGGGGTGGGTGCATGTGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR TCA 90 bp GTGTCCTTGGACACCAGGAGAGGGAATGTGGACACACTGAGGGACACCAGGGACCCCCCATTACAGGAATaGAAAGACAGAAGTTCCGAG +
Preference number: 4 (lower is better)
Translates to: VSLDTRRGNVDTLRDTRDPPLQE*KDRSSE
Trigger: CTCGGAACTTCTGTCTTTTCATTCCTGTAATGGGGG...GTCCCTGGTGTCCCTCAGTGTGTCCACATTCCCTCTCCTGGTGTCCAAGGACAC
54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR TCA 90 bp TGGGCGGGGCTTCTCCCATGTTCCCAGACAATCAGCTTGCCCACAGACTCCAGACATTGGTTGGCATCATaGGTAGAGATGGGAGAGAAG +
Preference number: 4 (lower is better)
Translates to: WAGLLPCSQTISLPTDSRHWLAS*VEMGEK
Trigger: CTTCTCTCCCATCTCTACTCATGATGCCAACCAATG...TCTGGAGTCTGTGGGCAAGCTGATTGTCTGGGAACATGGGAGAAGCCCCGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR TCA 90 bp TGGCGGGATGGTGTTTACGAGGACACAGGACAACAGGTGTCAAGAACCCTGGCACTCATCTCTAGGATCTaGGCCCAATTCCTCCAGCAC +
Preference number: 4 (lower is better)
Translates to: WRDGVYEDTGQQVSRTLALISRI*AQFLQH
Trigger: GTGCTGGAGGAATTGGGCTCAGATCCTAGAGATGAG...TGCCAGGGTTCTTGACACCTGTTGTCCTGTGTCCTCGTAAACACCATCCCGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533854.6
ENST00000673855.1
CDS-3UTR TCA 90 bp TCCTCCAACTGTCTCCCCACTGCTACTGCCAGCCATGTGCACTCCATTATGCATTTCTCACCACCCAGGTaGATAGGGGCTCAGACAGAC +
Preference number: 4 (lower is better)
Translates to: SSNCLPTATASHVHSIMHFSPPR*IGAQTD
Trigger: GTCTGTCTGAGCCCCTATTCACCTGGGTGGTGAGAA...ATGCATAATGGAGTGCACATGGCTGGCAGTAGCAGTGGGGAGACAGTTGGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR TCA 90 bp ATGAGCTCATCTCTAGGATCTGAGCCCAATTCCTCCAGCACTTTCCTTGGGGTCTTCCTAGAGCAGCAGTaGGCAGAGTCCTTGGCAGGG +
Preference number: 4 (lower is better)
Translates to: MSSSLGSEPNSSSTFLGVFLEQQ*AESLAG
Trigger: CCCTGCCAAGGACTCTGCTCACTGCTGCTCTAGGAA...GACCCCAAGGAAAGTGCTGGAGGAATTGGGCTCAGATCCTAGAGATGAGCTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533854.6
ENST00000673855.1
CDS-3UTR TCA 90 bp GCTGGAGAACACGTTGGCTCCAGAATGTTCTCTATCCTCTTTCCAGGGGCAGGCATCCTCCCAAGGGGGTaGCAGATTGAAAGGAGTCCT +
Preference number: 4 (lower is better)
Translates to: AGEHVGSRMFSILFPGAGILPRG*QIERSP
Trigger: AGGACTCCTTTCAATCTGTCACCCCCTTGGGAGGAT...GCCTGCCCCTGGAAAGAGGATAGAGAACATTCTGGAGCCAACGTGTTCTCCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR TCA 90 bp GTGTCCTTGGACACCAGGAGAGGGAATGTGGACACACTGAGGGACACCAGGGACTTTCTAAGGATCCACTaGGGAAGGATGTGCAGGATC +
Preference number: 4 (lower is better)
Translates to: VSLDTRRGNVDTLRDTRDFLRIH*GRMCRI
Trigger: GATCCTGCACATCCTTCCTCAGTGGATCCTTAGAAA...GTCCCTGGTGTCCCTCAGTGTGTCCACATTCCCTCTCCTGGTGTCCAAGGACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR GCA 90 bp ATGAAATCACACCGGAGAAACAGCCCAGGACAGAAGCTGTTATATAGTAGGTGCCCCCCGCTCCTCACCTaGAAGGAAGCAGACCCGCCA +
Preference number: 4 (lower is better)
Translates to: MKSHRRNSPGQKLLYSRCPPLLT*KEADPP
Trigger: TGGCGGGTCTGCTTCCTTGCAGGTGAGGAGCGGGGG...GCACCTACTATATAACAGCTTCTGTCCTGGGCTGTTTCTCCGGTGTGATTTCAT
54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000533854.6
ENST00000673855.1
CDS-3UTR GCA 90 bp ATGAGAACTCAGGCCTCTGAACCAGCAGGACAGAGAGCCCACGCATGCAAACCTTCATCCATCCACCTGTaGACCTACTCCCTAGGCAGA +
Preference number: 4 (lower is better)
Translates to: MRTQASEPAGQRAHACKPSSIHL*TYSLGR
Trigger: TCTGCCTAGGGAGTAGGTGCACAGGTGGATGGATGA...AGGTTTGCATGCGTGGGCTCTCTGTCCTGCTGGTTCAGAGGCCTGAGTTCTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR GCA 90 bp AGGGCCTTGGTCCGGAAATATTACCCTTGTAAGGGGACAGTATCCCCAGGACCATCTCCCCACTGCTACTaGCAGCCATGTGCACTCCAT +
Preference number: 4 (lower is better)
Translates to: RALVRKYYPCKGTVSPGPSPHCY*QPCALH
Trigger: ATGGAGTGCACATGGCTGGCAGTAGCAGTGGGGAGA...TGGTCCTGGGGATACTGTCCCCTTACAAGGGTAATATTTCCGGACCAAGGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR GCA 90 bp TACGAGGACACAGGACAACAGGTGTCAAGAACCCTGGCACCTACACCGCTGGACAAGGCAGCAGAATTCTaGCTTCCTCCAACTGTCTCC +
Preference number: 4 (lower is better)
Translates to: YEDTGQQVSRTLAPTPLDKAAEF*LPPTVS
Trigger: GGAGACAGTTGGAGGAAGGCAGAATTCTGCTGCCTT...GTCCAGCGGTGTAGGTGCCAGGGTTCTTGACACCTGTTGTCCTGTGTCCTCGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR GCA 90 bp AGAACCCTGGCACCTACACCGCTGGACTTTGGATTTCTAGCCTGGCAGCCACTGCTCAGTGGATGCAATTaGCACACCAATGAGCAGGGA +
Preference number: 4 (lower is better)
Translates to: RTLAPTPLDFGFLAWQPLLSGCN*HTNEQG
Trigger: TCCCTGCTCATTGGTGTGGCAATTGCATCCACTGAG...CAGTGGCTGCCAGGCTAGAAATCCAAAGTCCAGCGGTGTAGGTGCCAGGGTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR GCA 90 bp CAACAGAGAGCCTCCCACAGGAGGCTGAGTCATTGGAGTTGTGGGTGGGTGGGATGCAGAGCAGAGCAGTaGAAATATTACCAGCTGTGC +
Preference number: 4 (lower is better)
Translates to: QQRASHRRLSHWSCGWVGCRAEQ*KYYQLC
Trigger: GCACAGCTGGTAATATTTGCACTGCTCTGCTCTGCA...TCCCACCCACCCACAACTCCAATGACTCAGCCTCCTGTGGGAGGCTCTCTGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR CCA 90 bp GGGTGGCGGGATGGTGTTTACGAGGACACAGGACAACAGGTGTCAAGAACCCTGAGGCACTCATCTTCCTaGACCGTTGCTGTGCAACTA +
Preference number: 4 (lower is better)
Translates to: GWRDGVYEDTGQQVSRTLRHSSS*TVAVQL
Trigger: TAGTTGCACAGCAACGGTCCAGGAAGATGAGTGCCT...CAGGGTTCTTGACACCTGTTGTCCTGTGTCCTCGTAAACACCATCCCGCCACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533854.6
ENST00000673855.1
CDS-3UTR CCA 90 bp CAGATGACCCCTAACCACACACGCCAAACATGTTCCATGGCCAAACTTGTGTCAGCCAGTATCGTCCGGTaGGGACGGATGTGTCCGATG +
Preference number: 4 (lower is better)
Translates to: QMTPNHTRQTCSMAKLVSASIVR*GRMCPM
Trigger: CATCGGACACATCCGTCCCCACCGGACGATACTGGC...TGACACAAGTTTGGCCATGGAACATGTTTGGCGTGTGTGGTTAGGGGTCATCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533854.6
ENST00000673855.1
CDS-3UTR CCA 90 bp ATGAGAACTCAGGCCTCTGAACCAGCAGGACAGAGAGCCCACGCATGCAAACCTAAGCAGGGAGAGGACTaGGGTCAAGTGACAACAGCT +
Preference number: 4 (lower is better)
Translates to: MRTQASEPAGQRAHACKPKQGED*GQVTTA
Trigger: AGCTGTTGTCACTTGACCCCAGTCCTCTCCCTGCTT...AGGTTTGCATGCGTGGGCTCTCTGTCCTGCTGGTTCAGAGGCCTGAGTTCTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR CCA 90 bp GTGTCCTTGGACACCAGGAGAGGGAATGTGGACACACTGAGGGACACCAGGGACAGGGCAGCTGAGTTCTaGTGTGAGGAAAGGAGAAAA +
Preference number: 4 (lower is better)
Translates to: VSLDTRRGNVDTLRDTRDRAAEF*CEERRK
Trigger: TTTTCTCCTTTCCTCACACCAGAACTCAGCTGCCCT...GTCCCTGGTGTCCCTCAGTGTGTCCACATTCCCTCTCCTGGTGTCCAAGGACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR CCA 90 bp CCATTGGATTCCCATGCAACCCTGGGGAACACTGAATTTCTCACCACCCAGGTGAGACGTGCAGCTTTCTaGACTACGTGCTGGAGCCCA +
Preference number: 4 (lower is better)
Translates to: PLDSHATLGNTEFLTTQVRRAAF*TTCWSP
Trigger: TGGGCTCCAGCACGTAGTCCAGAAAGCTGCACGTCT...CACCTGGGTGGTGAGAAATTCAGTGTTCCCCAGGGTTGCATGGGAATCCAATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR CCA 90 bp GACACATGCACCCACCCCCAAACAGGTAATGACCGAGAACCTGTTCCTAAGATGGAGTCATTGGAGTTGTaGGTGGGTGGGAGGGGAGTG +
Preference number: 4 (lower is better)
Translates to: DTCTHPQTGNDREPVPKMESLEL*VGGRGV
Trigger: CACTCCCCTCCCACCCACCCACAACTCCAATGACTC...CATCTTAGGAACAGGTTCTCGGTCATTACCTGTTTGGGGGTGGGTGCATGTGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR CCA 90 bp GCTGGAGAACACGTTGGCTCCAGAATGTTCTCTATCCTCTTTCCAGGGGCAGGCTTTTACATGTCAGTGTaGCTGGGCCATGGTGCTGCC +
Preference number: 4 (lower is better)
Translates to: AGEHVGSRMFSILFPGAGFYMSV*LGHGAA
Trigger: GGCAGCACCATGGCCCAGCCACACTGACATGTAAAA...GCCTGCCCCTGGAAAGAGGATAGAGAACATTCTGGAGCCAACGTGTTCTCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR CCA 90 bp CAAGGGGGTGACAGATTGAAAGGAGTCCTTGGAGGTCGGGGAGAGCAGTCAACGTGGAGAGCTGCCAATTaGCCCTCATACCCAAAATCC +
Preference number: 4 (lower is better)
Translates to: QGGDRLKGVLGGRGEQSTWRAAN*PSYPKS
Trigger: GGATTTTGGGTATGAGGGCCAATTGGCAGCTCTCCA...CGTTGACTGCTCTCCCCGACCTCCAAGGACTCCTTTCAATCTGTCACCCCCTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR CCA 90 bp CCTACACCGCTGGACTTTGGATTTCTAGCCTGGCAGCCACTGCCATCCCCTCCCTGCTGGGGTTGCTTCTaGGAAAGTTGTCTTTATTCC +
Preference number: 4 (lower is better)
Translates to: PTPLDFGFLAWQPLPSPPCWGCF*ESCLYS
Trigger: GGAATAAAGACAACTTTCCCAGAAGCAACCCCAGCA...GGGAGGGGATGGCAGTGGCTGCCAGGCTAGAAATCCAAAGTCCAGCGGTGTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR CCA 90 bp ATGAGAACTCAGGCCTCTGAACCAGCAGGACAGAGAGCCCACGCATGCAAACCTATAAACTGGAGCACATaGCCACCCTGTTCCCCTTGC +
Preference number: 4 (lower is better)
Translates to: MRTQASEPAGQRAHACKPINWST*PPCSPC
Trigger: GCAAGGGGAACAGGGTGGCCATGTGCTCCAGTTTAT...AGGTTTGCATGCGTGGGCTCTCTGTCCTGCTGGTTCAGAGGCCTGAGTTCTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR CCA 90 bp TCCTCCAACTGTCTCCCCACTGCTACTGCCAGCCATGTGCACTCCATTATGCATTGCTCCATGGTGCCCTaGGAGTCAGCCAGGAAAATG +
Preference number: 4 (lower is better)
Translates to: SSNCLPTATASHVHSIMHCSMVP*ESARKM
Trigger: CATTTTCCTGGCTGACTCCCAGGGCACCATGGAGCA...ATGCATAATGGAGTGCACATGGCTGGCAGTAGCAGTGGGGAGACAGTTGGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR CCA 90 bp ATGAGCTCATCTCTAGGATCTGAGCCCAATTCCTCCAGCACTTTCCTTGGGGTCTGGCCATTTGCTCCATaGTGCCCTGGGAGTCAGCCA +
Preference number: 4 (lower is better)
Translates to: MSSSLGSEPNSSSTFLGVWPFAP*CPGSQP
Trigger: TGGCTGACTCCCAGGGCACCATGGAGCAAATGGCCA...GACCCCAAGGAAAGTGCTGGAGGAATTGGGCTCAGATCCTAGAGATGAGCTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533854.6
ENST00000673855.1
CDS-3UTR CCA 90 bp GACACATGCACCCACCCCCAAACAGGTAATGACCGAGAACCTGTTCCTAAGATGGGGTCTCACCTGCCATaGCACACCCACTGGCCATTT +
Preference number: 4 (lower is better)
Translates to: DTCTHPQTGNDREPVPKMGSHLP*HTHWPF
Trigger: AAATGGCCAGTGGGTGTGCCATGGCAGGTGAGACCC...CATCTTAGGAACAGGTTCTCGGTCATTACCTGTTTGGGGGTGGGTGCATGTGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR CCA 90 bp CAGGCAGCCTTCGGAGAGCAGCTGGATTATTCCAAGTCTGCCTTTGTTTGCACTCCATCCCCTCCCCATTaGATTCCCATGCAACCCTGG +
Preference number: 4 (lower is better)
Translates to: QAAFGEQLDYSKSAFVCTPSPPH*IPMQPW
Trigger: CCAGGGTTGCATGGGAATCCAATGGGGAGGGGATGG...AGTGCAAACAAAGGCAGACTTGGAATAATCCAGCTGCTCTCCGAAGGCTGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR CCA 90 bp CCATTGGATTCCCATGCAACCCTGGGGAACACTGAATTTCTCACCACCCAGGTGGACAGTCCCCACACCTaGAAGGACATGAGTGAGGAG +
Preference number: 4 (lower is better)
Translates to: PLDSHATLGNTEFLTTQVDSPHT*KDMSEE
Trigger: CTCCTCACTCATGTCCTTCCAGGTGTGGGGACTGTC...CACCTGGGTGGTGAGAAATTCAGTGTTCCCCAGGGTTGCATGGGAATCCAATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000533854.6
ENST00000673855.1
CDS-3UTR TCA 90 bp CACCTGTGCACCTACTCCCTAGGCAGAGTGCTGTGTTCCAAAGGCAGGTTAACTTGTAGTGGTGACCACTaGGCCTCGTCTCTTCTATGG +
Preference number: 4 (lower is better)
Translates to: HLCTYSLGRVLCSKGRLTCSGDH*ASSLLW
Trigger: CCATAGAAGAGACGAGGCTCAGTGGTCACCACTACA...AGTTAACCTGCCTTTGGAACACAGCACTCTGCCTAGGGAGTAGGTGCACAGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR TCA 90 bp CCCCTAACCACACACGCCAAACATGTTCCATGGCCAAACTTGTGTCATGAGTCTCAGAAGGGCTGGGCATaGGCCCATGAATTTGGCGTC +
Preference number: 4 (lower is better)
Translates to: PLTTHAKHVPWPNLCHESQKGWA*AHEFGV
Trigger: GACGCCAAATTCATGGGCTCATGCCCAGCCCTTCTG...AGACTCATGACACAAGTTTGGCCATGGAACATGTTTGGCGTGTGTGGTTAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR TCA 90 bp ATGAGCTCATCTCTAGGATCTGAGCCCAATTCCTCCAGCACTTTCCTTGGGGTCGTAGGATGCATCAGATaGCCCCTAACCACACACGCC +
Preference number: 4 (lower is better)
Translates to: MSSSLGSEPNSSSTFLGVVGCIR*PLTTHA
Trigger: GGCGTGTGTGGTTAGGGGTCATCTGATGCATCCTAC...GACCCCAAGGAAAGTGCTGGAGGAATTGGGCTCAGATCCTAGAGATGAGCTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000533854.6
ENST00000673855.1
CDS-3UTR TCA 90 bp CCCCTAACCACACACGCCAAACATGTTCCATGGCCAAACTTGTGTCATGAGTCTTTCCTCCTCTCCAGCTaGAGGGCTTCAGAATGCCGG +
Preference number: 4 (lower is better)
Translates to: PLTTHAKHVPWPNLCHESFLLSS*RASECR
Trigger: CCGGCATTCTGAAGCCCTTCAGCTGGAGAGGAGGAA...AGACTCATGACACAAGTTTGGCCATGGAACATGTTTGGCGTGTGTGGTTAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533854.6
ENST00000673855.1
CDS-3UTR GCA 90 bp GGGTGGCGGGATGGTGTTTACGAGGACACAGGACAACAGGTGTCAAGAACCCTGAAGTCTGCCTTTGTTTaGACTCAAGCTGCACCAGGT +
Preference number: 4 (lower is better)
Translates to: GWRDGVYEDTGQQVSRTLKSAFV*TQAAPG
Trigger: ACCTGGTGCAGCTTGAGTGCAAACAAAGGCAGACTT...CAGGGTTCTTGACACCTGTTGTCCTGTGTCCTCGTAAACACCATCCCGCCACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR GCA 90 bp AGAGTGCTCCTGACTGAAATCGTCCAGAAGCCCCTCTCAGGTTTATTCTCCAAAGCTTTCTGGACTACGTaGTGGAGCCCACGTGTCGCC +
Preference number: 4 (lower is better)
Translates to: RVLLTEIVQKPLSGLFSKAFWTT*WSPRVA
Trigger: GGCGACACGTGGGCTCCAGCACGTAGTCCAGAAAGC...TTTGGAGAATAAACCTGAGAGGGGCTTCTGGACGATTTCAGTCAGGAGCACTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR GCA 90 bp CAGGCAGCCTTCGGAGAGCAGCTGGATTATTCCAAGTCTGCCTTTGTTTGCACTTGCGCACACCAGACGTaGAGCTTTCTGGACTACGTG +
Preference number: 4 (lower is better)
Translates to: QAAFGEQLDYSKSAFVCTCAHQT*SFLDYV
Trigger: CACGTAGTCCAGAAAGCTGCACGTCTGGTGTGCGCA...AGTGCAAACAAAGGCAGACTTGGAATAATCCAGCTGCTCTCCGAAGGCTGCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR GCA 90 bp CAACAGAGAGCCTCCCACAGGAGGCTGAGTCATTGGAGTTGTGGGTGGGTGGGATCTTTAACTCTTACATaGACTCCAGCCTGGGTGACA +
Preference number: 4 (lower is better)
Translates to: QQRASHRRLSHWSCGWVGSLTLT*TPAWVT
Trigger: TGTCACCCAGGCTGGAGTGCATGTAAGAGTTAAAGA...TCCCACCCACCCACAACTCCAATGACTCAGCCTCCTGTGGGAGGCTCTCTGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR GCA 90 bp GTGTCCTTGGACACCAGGAGAGGGAATGTGGACACACTGAGGGACACCAGGGACTCCTATTCACTCATCTaGATGCCTGGAACCCAAAGA +
Preference number: 4 (lower is better)
Translates to: VSLDTRRGNVDTLRDTRDSYSLI*MPGTQR
Trigger: TCTTTGGGTTCCAGGCATGCAGATGAGTGAATAGGA...GTCCCTGGTGTCCCTCAGTGTGTCCACATTCCCTCTCCTGGTGTCCAAGGACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR GCA 90 bp GGTGGCGGGATGGTGTTTACGAGGACACAGGACAACAGGTGTCAAGAACCCTGGGTTTGGAATCACTGTTaGCATCTTGCTACCCACTCG +
Preference number: 4 (lower is better)
Translates to: GGGMVFTRTQDNRCQEPWVWNHC*HLATHS
Trigger: CGAGTGGGTAGCAAGATGGCAACAGTGATTCCAAAC...CCAGGGTTCTTGACACCTGTTGTCCTGTGTCCTCGTAAACACCATCCCGCCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR GCA 90 bp TCCTCCAACTGTCTCCCCACTGCTACTGCCAGCCATGTGCACTCCATTATGCATGGGGCAGGCTCTAGCTaGATACCAGTGAATACCAGT +
Preference number: 4 (lower is better)
Translates to: SSNCLPTATASHVHSIMHGAGSS*IPVNTS
Trigger: ACTGGTATTCACTGGTATGCAGCTAGAGCCTGCCCC...ATGCATAATGGAGTGCACATGGCTGGCAGTAGCAGTGGGGAGACAGTTGGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR GCA 90 bp TGGCGGGATGGTGTTTACGAGGACACAGGACAACAGGTGTCAAGAACCCTGGCATTTATCATCCCTGCTTaGATCCCTGCTTGCTTGGCC +
Preference number: 4 (lower is better)
Translates to: WRDGVYEDTGQQVSRTLAFIIPA*IPACLA
Trigger: GGCCAAGCAAGCAGGGATGCAAGCAGGGATGATAAA...TGCCAGGGTTCTTGACACCTGTTGTCCTGTGTCCTCGTAAACACCATCCCGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR CCA 90 bp TTATTCTTCCTTGGGGTGCTGCAAGTATCTGATCTCTTAGCTAAATTCCACATTACCCACGGCTCTCGCTaGAGCGGCCGCGACCCCCGA +
Preference number: 4 (lower is better)
Translates to: LFFLGVLQVSDLLAKFHITHGSR*SGRDPR
Trigger: TCGGGGGTCGCGGCCGCTCCAGCGAGAGCCGTGGGT...AATGTGGAATTTAGCTAAGAGATCAGATACTTGCAGCACCCCAAGGAAGAATAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR CCA 90 bp GAGACTGTGCCTGGGTTGAAGATGGTGAATCCATTCTTGGGTGAATCCCAAGCCAGGAGGCTGAGTCATTaGAGTTGTGGGTGGGTGGGA +
Preference number: 4 (lower is better)
Translates to: ETVPGLKMVNPFLGESQARRLSH*SCGWVG
Trigger: TCCCACCCACCCACAACTCCAATGACTCAGCCTCCT...GGCTTGGGATTCACCCAAGAATGGATTCACCATCTTCAACCCAGGCACAGTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR CCA 90 bp TATGAGGAAGACCAGGCCTTAAGAAGAGACCGTGTGCAAAGATGTTCTAGTGACTGCTCAGGCCTTAGGTaGAATGTGGCTCCCCCGGCC +
Preference number: 4 (lower is better)
Translates to: YEEDQALRRDRVQRCSSDCSGLR*NVAPPA
Trigger: GGCCGGGGGAGCCACATTCCACCTAAGGCCTGAGCA...GTCACTAGAACATCTTTGCACACGGTCTCTTCTTAAGGCCTGGTCTTCCTCATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR CCA 90 bp GCTGGAGAACACGTTGGCTCCAGAATGTTCTCTATCCTCTTTCCAGGGGCAGGCGAGAAAGTCAAGACTTaGAGAGCTGCCAATTGGCCC +
Preference number: 4 (lower is better)
Translates to: AGEHVGSRMFSILFPGAGEKVKT*RAANWP
Trigger: GGGCCAATTGGCAGCTCTCCAAGTCTTGACTTTCTC...GCCTGCCCCTGGAAAGAGGATAGAGAACATTCTGGAGCCAACGTGTTCTCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR CCA 90 bp AGGACTGTAGGTGCCATGCTCTTGGGGGTGCACTTGAAACAGGACTTGCAGAGCTCTTCTATGGCACACTaGAGCAGCCACTGCTACCAT +
Preference number: 4 (lower is better)
Translates to: RTVGAMLLGVHLKQDLQSSSMAH*SSHCYH
Trigger: ATGGTAGCAGTGGCTGCTCCAGTGTGCCATAGAAGA...GCTCTGCAAGTCCTGTTTCAAGTGCACCCCCAAGAGCATGGCACCTACAGTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR CCA 90 bp CCCAACCAGAGACATGCCAGCCCCGAGATAACCTTCCCTCCAACCAGAGAGATGGTAGGTCTAAGCCAGTaGTTCTCAACCCTGGTTTCA +
Preference number: 4 (lower is better)
Translates to: PNQRHASPEITFPPTREMVGLSQ*FSTLVS
Trigger: TGAAACCAGGGTTGAGAACCACTGGCTTAGACCTAC...CATCTCTCTGGTTGGAGGGAAGGTTATCTCGGGGCTGGCATGTCTCTGGTTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR CCA 90 bp ATGAGAACTCAGGCCTCTGAACCAGCAGGACAGAGAGCCCACGCATGCAAACCTCCCAAGTTAGTCTGCTaGGAACGTTGTGATACGTGG +
Preference number: 4 (lower is better)
Translates to: MRTQASEPAGQRAHACKPPKLVC*ERCDTW
Trigger: CCACGTATCACAACGTTCCCAGCAGACTAACTTGGG...AGGTTTGCATGCGTGGGCTCTCTGTCCTGCTGGTTCAGAGGCCTGAGTTCTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR CCA 90 bp CCATTGGATTCCCATGCAACCCTGGGGAACACTGAATTTCTCACCACCCAGGTGCTCCAGCACTTTCCTTaGGGTCACGTTGGTAGGATG +
Preference number: 4 (lower is better)
Translates to: PLDSHATLGNTEFLTTQVLQHFP*GHVGRM
Trigger: CATCCTACCAACGTGACCCCAAGGAAAGTGCTGGAG...CACCTGGGTGGTGAGAAATTCAGTGTTCCCCAGGGTTGCATGGGAATCCAATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533854.6
ENST00000673855.1
CDS-3UTR CCA 90 bp ATGAGCTCATCTCTAGGATCTGAGCCCAATTCCTCCAGCACTTTCCTTGGGGTCTGCTCCATGGTGCCCTaGGAGTCAGCCAGGAAAATG +
Preference number: 4 (lower is better)
Translates to: MSSSLGSEPNSSSTFLGVCSMVP*ESARKM
Trigger: CATTTTCCTGGCTGACTCCCAGGGCACCATGGAGCA...GACCCCAAGGAAAGTGCTGGAGGAATTGGGCTCAGATCCTAGAGATGAGCTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000533854.6
ENST00000673855.1
3UTR CAA 72 bp GATGGTGCAGATCTTGAATGTGAATGGCCAGGCCAGTaGGCAAGTGCACGAGTCCAGCTGCATCTGTGTAAG +
Preference number: 4 (lower is better)
Translates to: DGADLECEWPGQ*ASARVQLHLCK
Trigger: CTTACACAGATGCAGCTGGACTCGTGCACTTGCCAACTGGCCTGGCCATTCACATTCAAGATCTGCACCATC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR CAA 72 bp CGGGTCTCCAGCCCAACCAGCCTCTGCCATCAGATTTaGGTTGTACTCACCAAGTCTCCACAACTTCTTGAG +
Preference number: 4 (lower is better)
Translates to: RVSSPTSLCHQI*VVLTKSPQLLE
Trigger: CTCAAGAAGTTGTGGAGACTTGGTGAGTACAACCAAAATCTGATGGCAGAGGCTGGTTGGGCTGGAGACCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR TCA 90 bp GAGACTGTGCCTGGGTTGAAGATGGTGAATCCATTCTTGGGTGAATCCCAAGCCAGGACTGGGGTCAAGTaGCAACAGCTAAGCATGGGT +
Preference number: 4 (lower is better)
Translates to: ETVPGLKMVNPFLGESQARTGVK*QQLSMG
Trigger: ACCCATGCTTAGCTGTTGTCACTTGACCCCAGTCCT...GGCTTGGGATTCACCCAAGAATGGATTCACCATCTTCAACCCAGGCACAGTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR TCA 90 bp CCCCTAACCACACACGCCAAACATGTTCCATGGCCAAACTTGTGTCATGAGTCTATGGTCTCGATCTCCTaGCCTAGTGATCTGCCTGCC +
Preference number: 4 (lower is better)
Translates to: PLTTHAKHVPWPNLCHESMVSIS*PSDLPA
Trigger: GGCAGGCAGATCACTAGGTCAGGAGATCGAGACCAT...AGACTCATGACACAAGTTTGGCCATGGAACATGTTTGGCGTGTGTGGTTAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR TCA 90 bp GACACATGCACCCACCCCCAAACAGGTAATGACCGAGAACCTGTTCCTAAGATGGGTGCCCCCTACATGTaGTTCTCTAGGGACATCACT +
Preference number: 4 (lower is better)
Translates to: DTCTHPQTGNDREPVPKMGAPYM*FSRDIT
Trigger: AGTGATGTCCCTAGAGAATCACATGTAGGGGGCACC...CATCTTAGGAACAGGTTCTCGGTCATTACCTGTTTGGGGGTGGGTGCATGTGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR TCA 90 bp GCTGGAGAACACGTTGGCTCCAGAATGTTCTCTATCCTCTTTCCAGGGGCAGGCCAATTGCCACACCAATaGGCAGGGAAGCCTTTGAAA +
Preference number: 4 (lower is better)
Translates to: AGEHVGSRMFSILFPGAGQLPHQ*AGKPLK
Trigger: TTTCAAAGGCTTCCCTGCTCATTGGTGTGGCAATTG...GCCTGCCCCTGGAAAGAGGATAGAGAACATTCTGGAGCCAACGTGTTCTCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR GCA 90 bp CAGATGACCCCTAACCACACACGCCAAACATGTTCCATGGCCAAACTTGTGTCAAGTAATCGGAGCAGTTaGTCAGCCGAGGGCGGTAGA +
Preference number: 4 (lower is better)
Translates to: QMTPNHTRQTCSMAKLVSSNRSS*SAEGGR
Trigger: TCTACCGCCCTCGGCTGAGCAACTGCTCCGATTACT...TGACACAAGTTTGGCCATGGAACATGTTTGGCGTGTGTGGTTAGGGGTCATCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR GCA 90 bp TGGCGGGATGGTGTTTACGAGGACACAGGACAACAGGTGTCAAGAACCCTGGCATGTTTGCACTCAAGCTaGACCAGGTGTCCTCAAATC +
Preference number: 4 (lower is better)
Translates to: WRDGVYEDTGQQVSRTLACLHSS*TRCPQI
Trigger: GATTTGAGGACACCTGGTGCAGCTTGAGTGCAAACA...TGCCAGGGTTCTTGACACCTGTTGTCCTGTGTCCTCGTAAACACCATCCCGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR GCA 90 bp TTATTCCAAGTCTGCCTTTGTTTGCACTCAAGCTGCACCAGGTGTCCTCAAATCGGGAAGGTAGCCGTCTaGAAGCCAAGGACAGAGGCC +
Preference number: 4 (lower is better)
Translates to: LFQVCLCLHSSCTRCPQIGKVAV*KPRTEA
Trigger: GGCCTCTGTCCTTGGCTTGCAGACGGCTACCTTCCC...GATTTGAGGACACCTGGTGCAGCTTGAGTGCAAACAAAGGCAGACTTGGAATAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR GCA 90 bp GGGGTGCACTTGAAACAGGACTTGCAGAGCAGAGCAGTGCAAATATTACCAGCTCCAGGAAGCAGAGGTTaGAGTGAGCCGAGATCACAC +
Preference number: 4 (lower is better)
Translates to: GVHLKQDLQSRAVQILPAPGSRG*SEPRSH
Trigger: GTGTGATCTCGGCTCACTGCAACCTCTGCTTCCTGG...AGCTGGTAATATTTGCACTGCTCTGCTCTGCAAGTCCTGTTTCAAGTGCACCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR GCA 90 bp TCCTCCAACTGTCTCCCCACTGCTACTGCCAGCCATGTGCACTCCATTATGCATAGCAGCCAGGATTTCTaGCAGGAGACTGCAAGTTTG +
Preference number: 4 (lower is better)
Translates to: SSNCLPTATASHVHSIMHSSQDF*QETASL
Trigger: CAAACTTGCAGTCTCCTGGCAGAAATCCTGGCTGCT...ATGCATAATGGAGTGCACATGGCTGGCAGTAGCAGTGGGGAGACAGTTGGAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR GCA 90 bp CTGATGAGAACTCAGGCCTCTGAACCAGCAGGACAGAGAGCCCACGCATGCAAAGAAGTCTGCTGGGGTTaGTTCTGGGAAAGTTGTCTT +
Preference number: 4 (lower is better)
Translates to: LMRTQASEPAGQRAHACKEVCWG*FWESCL
Trigger: AAGACAACTTTCCCAGAAGCAACCCCAGCAGACTTC...TTTGCATGCGTGGGCTCTCTGTCCTGCTGGTTCAGAGGCCTGAGTTCTCATCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR CCA 90 bp AGAACCCTGGCACCTACACCGCTGGACTTTGGATTTCTAGCCTGGCAGCCACTGTCAGCTGGGTGTTCATaGGCATCACATATTCTATGG +
Preference number: 4 (lower is better)
Translates to: RTLAPTPLDFGFLAWQPLSAGCS*ASHILW
Trigger: CCATAGAATATGTGATGCCCATGAACACCCAGCTGA...CAGTGGCTGCCAGGCTAGAAATCCAAAGTCCAGCGGTGTAGGTGCCAGGGTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533854.6
ENST00000673855.1
CDS-3UTR CCA 90 bp TCTACAAGATTCCATCTTAGGGCCTTGGTCCGGAAATATTACCCTTGTAAGGGGAGCCACTGCTGTGATTaGCACTCACATGGGCGGGGC +
Preference number: 4 (lower is better)
Translates to: STRFHLRALVRKYYPCKGSHCCD*HSHGRG
Trigger: GCCCCGCCCATGTGAGTGCCAATCACAGCAGTGGCT...CCCCTTACAAGGGTAATATTTCCGGACCAAGGCCCTAAGATGGAATCTTGTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR CCA 90 bp TCTACAAGATTCCATCTTAGGGCCTTGGTCCGGAAATATTACCCTTGTAAGGGGTCTCAGAGCTGGCCCTaGCCCAGGGCCATGAAGTTG +
Preference number: 4 (lower is better)
Translates to: STRFHLRALVRKYYPCKGSQSWP*PRAMKL
Trigger: CAACTTCATGGCCCTGGGCCAGGGCCAGCTCTGAGA...CCCCTTACAAGGGTAATATTTCCGGACCAAGGCCCTAAGATGGAATCTTGTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR CCA 90 bp TGGCGGGATGGTGTTTACGAGGACACAGGACAACAGGTGTCAAGAACCCTGGCAGATCTTGAATGTGAATaGCCAGGCCAGTTGGCAAGT +
Preference number: 4 (lower is better)
Translates to: WRDGVYEDTGQQVSRTLADLECE*PGQLAS
Trigger: ACTTGCCAACTGGCCTGGCCATTCACATTCAAGATC...TGCCAGGGTTCTTGACACCTGTTGTCCTGTGTCCTCGTAAACACCATCCCGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR CCA 90 bp AGGACTGTAGGTGCCATGCTCTTGGGGGTGCACTTGAAACAGGACTTGCAGAGCAATTGGGACCAGAACTaGCTTCTCTTACCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: RTVGAMLLGVHLKQDLQSNWDQN*LLLPFS
Trigger: GGAGAAGGGTAAGAGAAGCCAGTTCTGGTCCCAATT...GCTCTGCAAGTCCTGTTTCAAGTGCACCCCCAAGAGCATGGCACCTACAGTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR CCA 90 bp GAGACTGTGCCTGGGTTGAAGATGGTGAATCCATTCTTGGGTGAATCCCAAGCCAGAGGTCCAGGATCCTaGTTCAGGGATGTGAGACTC +
Preference number: 4 (lower is better)
Translates to: ETVPGLKMVNPFLGESQARGPGS*FRDVRL
Trigger: GAGTCTCACATCCCTGAACCAGGATCCTGGACCTCT...GGCTTGGGATTCACCCAAGAATGGATTCACCATCTTCAACCCAGGCACAGTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR CCA 90 bp GCTGGAGAACACGTTGGCTCCAGAATGTTCTCTATCCTCTTTCCAGGGGCAGGCTTCTTGCATTTTGTTTaGGATGCCACCACTCCCCAG +
Preference number: 4 (lower is better)
Translates to: AGEHVGSRMFSILFPGAGFLHFV*DATTPQ
Trigger: CTGGGGAGTGGTGGCATCCCAAACAAAATGCAAGAA...GCCTGCCCCTGGAAAGAGGATAGAGAACATTCTGGAGCCAACGTGTTCTCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR CCA 90 bp CAAGGGGGTGACAGATTGAAAGGAGTCCTTGGAGGTCGGGGAGAGCAGTCAACGATTCCCATGCAACCCTaGGGAACACTGAATTTCTCA +
Preference number: 4 (lower is better)
Translates to: QGGDRLKGVLGGRGEQSTIPMQP*GTLNFS
Trigger: TGAGAAATTCAGTGTTCCCCAGGGTTGCATGGGAAT...CGTTGACTGCTCTCCCCGACCTCCAAGGACTCCTTTCAATCTGTCACCCCCTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000533854.6
ENST00000673855.1
CDS-3UTR CCA 90 bp TTCTTTGCACCCCACACACCCATCAACTCAGGAATTTACGCTTCCAGTGCTTCAAGAGCAGTCAACGCATaGGGACAGTCCCCACACCTG +
Preference number: 4 (lower is better)
Translates to: FFAPHTPINSGIYASSASRAVNA*GQSPHL
Trigger: CAGGTGTGGGGACTGTCCCCATGCGTTGACTGCTCT...TGAAGCACTGGAAGCGTAAATTCCTGAGTTGATGGGTGTGTGGGGTGCAAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000533854.6
ENST00000673855.1
CDS-3UTR CCA 90 bp ATGAGCTCATCTCTAGGATCTGAGCCCAATTCCTCCAGCACTTTCCTTGGGGTCATTGAAAGGAGTCCTTaGAGGTCGGGGAGAGCAGTC +
Preference number: 4 (lower is better)
Translates to: MSSSLGSEPNSSSTFLGVIERSP*RSGRAV
Trigger: GACTGCTCTCCCCGACCTCCAAGGACTCCTTTCAAT...GACCCCAAGGAAAGTGCTGGAGGAATTGGGCTCAGATCCTAGAGATGAGCTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000533854.6
ENST00000673855.1
CDS-3UTR TCA 90 bp TGGCGGGATGGTGTTTACGAGGACACAGGACAACAGGTGTCAAGAACCCTGGCATCATCTTTAGAACATTaGCCGTGGACTCGGATGTCA +
Preference number: 4 (lower is better)
Translates to: WRDGVYEDTGQQVSRTLASSLEH*PWTRMS
Trigger: TGACATCCGAGTCCACGGTCAATGTTCTAAAGATGA...TGCCAGGGTTCTTGACACCTGTTGTCCTGTGTCCTCGTAAACACCATCCCGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533854.6
ENST00000673855.1
CDS-3UTR TCA 90 bp ATGAGAACTCAGGCCTCTGAACCAGCAGGACAGAGAGCCCACGCATGCAAACCTGTTCAGAAGGAACACTaGCAGCTTGACATGTCTAAG +
Preference number: 4 (lower is better)
Translates to: MRTQASEPAGQRAHACKPVQKEH*QLDMSK
Trigger: CTTAGACATGTCAAGCTGTCAGTGTTCCTTCTGAAC...AGGTTTGCATGCGTGGGCTCTCTGTCCTGCTGGTTCAGAGGCCTGAGTTCTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR TCA 90 bp TCCTCCAACTGTCTCCCCACTGCTACTGCCAGCCATGTGCACTCCATTATGCATACTGCACTGAAAGCCTaGATAGAACAAAGGCTGACC +
Preference number: 4 (lower is better)
Translates to: SSNCLPTATASHVHSIMHTALKA*IEQRLT
Trigger: GGTCAGCCTTTGTTCTATTCAGGCTTTCAGTGCAGT...ATGCATAATGGAGTGCACATGGCTGGCAGTAGCAGTGGGGAGACAGTTGGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR TCA 90 bp TCTACAAGATTCCATCTTAGGGCCTTGGTCCGGAAATATTACCCTTGTAAGGGGCCTGGTTCAGGGATGTaGGACTCCAGAGACCTCAGC +
Preference number: 4 (lower is better)
Translates to: STRFHLRALVRKYYPCKGPGSGM*DSRDLS
Trigger: GCTGAGGTCTCTGGAGTCTCACATCCCTGAACCAGG...CCCCTTACAAGGGTAATATTTCCGGACCAAGGCCCTAAGATGGAATCTTGTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR TCA 90 bp CAGATGACCCCTAACCACACACGCCAAACATGTTCCATGGCCAAACTTGTGTCAATCCTCCCAAGGGGGTaGCAGATTGAAAGGAGTCCT +
Preference number: 4 (lower is better)
Translates to: QMTPNHTRQTCSMAKLVSILPRG*QIERSP
Trigger: AGGACTCCTTTCAATCTGTCACCCCCTTGGGAGGAT...TGACACAAGTTTGGCCATGGAACATGTTTGGCGTGTGTGGTTAGGGGTCATCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000533854.6
ENST00000673855.1
CDS-3UTR GCA 90 bp CAGGCAGCCTTCGGAGAGCAGCTGGATTATTCCAAGTCTGCCTTTGTTTGCACTCCTTCTCCTCCACCCTaGTGTGAGACAAATGGAAGA +
Preference number: 4 (lower is better)
Translates to: QAAFGEQLDYSKSAFVCTPSPPP*CETNGR
Trigger: TCTTCCATTTGTCTCACAGCAGGGTGGAGGAGAAGG...AGTGCAAACAAAGGCAGACTTGGAATAATCCAGCTGCTCTCCGAAGGCTGCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR GCA 90 bp TCCTCCAACTGTCTCCCCACTGCTACTGCCAGCCATGTGCACTCCATTATGCATGAGACTTTCCAACCCTaGCATAAACTTCTCCCACAC +
Preference number: 4 (lower is better)
Translates to: SSNCLPTATASHVHSIMHETFQP*HKLLPH
Trigger: GTGTGGGAGAAGTTTATGGCAGGGTTGGAAAGTCTC...ATGCATAATGGAGTGCACATGGCTGGCAGTAGCAGTGGGGAGACAGTTGGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR GCA 90 bp TTATTCCAAGTCTGCCTTTGTTTGCACTCAAGCTGCACCAGGTGTCCTCAAATCCACCCCAGCTCTGCATaGAGCCCTGGTAACACAGGA +
Preference number: 4 (lower is better)
Translates to: LFQVCLCLHSSCTRCPQIHPSSA*SPGNTG
Trigger: TCCTGTGTTACCAGGGCTGCATGCAGAGCTGGGGTG...GATTTGAGGACACCTGGTGCAGCTTGAGTGCAAACAAAGGCAGACTTGGAATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR GCA 90 bp CCTACACCGCTGGACTTTGGATTTCTAGCCTGGCAGCCACTGCCATCCCCTCCCAATTTACGCTTCCAGTaGTTCAGGAAACATTGTGAA +
Preference number: 4 (lower is better)
Translates to: PTPLDFGFLAWQPLPSPPNLRFQ*FRKHCE
Trigger: TTCACAATGTTTCCTGAAGCACTGGAAGCGTAAATT...GGGAGGGGATGGCAGTGGCTGCCAGGCTAGAAATCCAAAGTCCAGCGGTGTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533854.6
ENST00000673855.1
CDS-3UTR CCA 90 bp GCTGGGAGGAGTCTACTACTTGAGCTTGGTTGCATTTTGCTTGTAAAACTTACAGAGTGGGTGAGCAGGTaGCAGTACCCACGGCTCTCG +
Preference number: 4 (lower is better)
Translates to: AGRSLLLELGCILLVKLTEWVSR*QYPRLS
Trigger: CGAGAGCCGTGGGTACTGCCACCTGCTCACCCACTC...TGTAAGTTTTACAAGCAAAATGCAACCAAGCTCAAGTAGTAGACTCCTCCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR CCA 90 bp AGAGTGCTCCTGACTGAAATCGTCCAGAAGCCCCTCTCAGGTTTATTCTCCAAAGGGCATGGCTTGCAGTaGCTTCTGTGGACTTACGGA +
Preference number: 4 (lower is better)
Translates to: RVLLTEIVQKPLSGLFSKGHGLQ*LLWTYG
Trigger: TCCGTAAGTCCACAGAAGCCACTGCAAGCCATGCCC...TTTGGAGAATAAACCTGAGAGGGGCTTCTGGACGATTTCAGTCAGGAGCACTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR CCA 90 bp AGGACTGTAGGTGCCATGCTCTTGGGGGTGCACTTGAAACAGGACTTGCAGAGCTCACATCTGAGATGGTaGGATCTACGTTCTCTTCTC +
Preference number: 4 (lower is better)
Translates to: RTVGAMLLGVHLKQDLQSSHLRW*DLRSLL
Trigger: GAGAAGAGAACGTAGATCCCACCATCTCAGATGTGA...GCTCTGCAAGTCCTGTTTCAAGTGCACCCCCAAGAGCATGGCACCTACAGTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR CCA 90 bp ATGAGCTCATCTCTAGGATCTGAGCCCAATTCCTCCAGCACTTTCCTTGGGGTCGCAAGAGACTGTGCCTaGGTTGAAGATGGTGAATCC +
Preference number: 4 (lower is better)
Translates to: MSSSLGSEPNSSSTFLGVARDCA*VEDGES
Trigger: GGATTCACCATCTTCAACCCAGGCACAGTCTCTTGC...GACCCCAAGGAAAGTGCTGGAGGAATTGGGCTCAGATCCTAGAGATGAGCTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR CCA 90 bp CAAGGGGGTGACAGATTGAAAGGAGTCCTTGGAGGTCGGGGAGAGCAGTCAACGAATCCAGAGTTTTCCTaGAGCCATTTCCAACATTGG +
Preference number: 4 (lower is better)
Translates to: QGGDRLKGVLGGRGEQSTNPEFS*SHFQHW
Trigger: CCAATGTTGGAAATGGCTCCAGGAAAACTCTGGATT...CGTTGACTGCTCTCCCCGACCTCCAAGGACTCCTTTCAATCTGTCACCCCCTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR CCA 90 bp ATGAAATCACACCGGAGAAACAGCCCAGGACAGAAGCTGTTATATAGTAGGTGCCCATCCCCTCCCCATTaGATTCCCATGCAACCCTGG +
Preference number: 4 (lower is better)
Translates to: MKSHRRNSPGQKLLYSRCPSPPH*IPMQPW
Trigger: CCAGGGTTGCATGGGAATCCAATGGGGAGGGGATGG...GCACCTACTATATAACAGCTTCTGTCCTGGGCTGTTTCTCCGGTGTGATTTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000533854.6
ENST00000673855.1
CDS-3UTR CCA 90 bp CCCCTAACCACACACGCCAAACATGTTCCATGGCCAAACTTGTGTCATGAGTCTTACACCGCTGGACTTTaGATTTCTAGCCTGGCAGCC +
Preference number: 4 (lower is better)
Translates to: PLTTHAKHVPWPNLCHESYTAGL*ISSLAA
Trigger: GGCTGCCAGGCTAGAAATCCAAAGTCCAGCGGTGTA...AGACTCATGACACAAGTTTGGCCATGGAACATGTTTGGCGTGTGTGGTTAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533854.6
ENST00000673855.1
3UTR CAA 72 bp ATATCAGAGTCACCTTTCGGCCAGATGGTGCAGATCTaGAATGTGAATGGCCAGGCCAGTTGGCAAGTGCAC +
Preference number: 4 (lower is better)
Translates to: ISESPFGQMVQI*NVNGQASWQVH
Trigger: GTGCACTTGCCAACTGGCCTGGCCATTCACATTCAAGATCTGCACCATCTGGCCGAAAGGTGACTCTGATAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR CAA 72 bp CGGAGAGCAGCTGGATTATTCCAAGTCTGCCTTTGTTaGCACTCAAGCTGCACCAGGTGTCCTCAAATCCAG +
Preference number: 4 (lower is better)
Translates to: RRAAGLFQVCLC*HSSCTRCPQIQ
Trigger: CTGGATTTGAGGACACCTGGTGCAGCTTGAGTGCAAACAAAGGCAGACTTGGAATAATCCAGCTGCTCTCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR CAA 72 bp GGTGTCACACTGCCTGGTCTTCTGGAAAAATCTGATTaGCCCACATCTGTCCTACACCCAGGAAGCAGACAC +
Preference number: 4 (lower is better)
Translates to: GVTLPGLLEKSD*PTSVLHPGSRH
Trigger: GTGTCTGCTTCCTGGGTGTAGGACAGATGTGGGCAAATCAGATTTTTCCAGAAGACCAGGCAGTGTGACACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR CAA 72 bp TTTCTAAGGATTTATCATCCCTGCTTGCATCCCTGCTaGCTTGGCCCTGACAGTGGGCTGGAGAACACGTTG +
Preference number: 4 (lower is better)
Translates to: FLRIYHPCLHPC*LGPDSGLENTL
Trigger: CAACGTGTTCTCCAGCCCACTGTCAGGGCCAAGCAAGCAGGGATGCAAGCAGGGATGATAAATCCTTAGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR CAA 72 bp CCATGCAGAACATTTAGGACTGTAGGTGCCATGCTCTaGGGGGTGCACTTGAAACAGGACTTGCAGAGCAGA +
Preference number: 4 (lower is better)
Translates to: PCRTFRTVGAML*GVHLKQDLQSR
Trigger: TCTGCTCTGCAAGTCCTGTTTCAAGTGCACCCCCAAGAGCATGGCACCTACAGTCCTAAATGTTCTGCATGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR TCA 90 bp TCCTCCAACTGTCTCCCCACTGCTACTGCCAGCCATGTGCACTCCATTATGCATTCATCTTTAGAACATTaGCCGTGGACTCGGATGTCA +
Preference number: 4 (lower is better)
Translates to: SSNCLPTATASHVHSIMHSSLEH*PWTRMS
Trigger: TGACATCCGAGTCCACGGTCAATGTTCTAAAGATGA...ATGCATAATGGAGTGCACATGGCTGGCAGTAGCAGTGGGGAGACAGTTGGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR TCA 90 bp ATGAGCTCATCTCTAGGATCTGAGCCCAATTCCTCCAGCACTTTCCTTGGGGTCCTTCCAGAAAGGCAATaGAGCTTCTGCCTGTCTCTT +
Preference number: 4 (lower is better)
Translates to: MSSSLGSEPNSSSTFLGVLPERQ*SFCLSL
Trigger: AAGAGACAGGCAGAAGCTTCATTGCCTTTCTGGAAG...GACCCCAAGGAAAGTGCTGGAGGAATTGGGCTCAGATCCTAGAGATGAGCTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR TCA 90 bp CCATTGGATTCCCATGCAACCCTGGGGAACACTGAATTTCTCACCACCCAGGTGAGCATATCATGGCCTTaGCATTGCCTGGAAGCTTTT +
Preference number: 4 (lower is better)
Translates to: PLDSHATLGNTEFLTTQVSISWP*HCLEAF
Trigger: AAAAGCTTCCAGGCAATGTCAAGGCCATGATATGCT...CACCTGGGTGGTGAGAAATTCAGTGTTCCCCAGGGTTGCATGGGAATCCAATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR GCA 90 bp CTGATGAGAACTCAGGCCTCTGAACCAGCAGGACAGAGAGCCCACGCATGCAAAAGCGACACACAGCATTaGTTTGCTACTCAAAATCTC +
Preference number: 4 (lower is better)
Translates to: LMRTQASEPAGQRAHACKSDTQH*FATQNL
Trigger: GAGATTTTGAGTAGCAAAGCAATGCTGTGTGTCGCT...TTTGCATGCGTGGGCTCTCTGTCCTGCTGGTTCAGAGGCCTGAGTTCTCATCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR GCA 90 bp GACACATGCACCCACCCCCAAACAGGTAATGACCGAGAACCTGTTCCTAAGATGAGCCCAACCAGCCTCTaGCATCAGATTTTGGTTGTA +
Preference number: 4 (lower is better)
Translates to: DTCTHPQTGNDREPVPKMSPTSL*HQILVV
Trigger: TACAACCAAAATCTGATGGCAGAGGCTGGTTGGGCT...CATCTTAGGAACAGGTTCTCGGTCATTACCTGTTTGGGGGTGGGTGCATGTGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR GCA 90 bp TCTACAAGATTCCATCTTAGGGCCTTGGTCCGGAAATATTACCCTTGTAAGGGGCAACTGTCTCCCCACTaGTACTGCCAGCCATGTGCA +
Preference number: 4 (lower is better)
Translates to: STRFHLRALVRKYYPCKGQLSPH*YCQPCA
Trigger: TGCACATGGCTGGCAGTAGCAGTGGGGAGACAGTTG...CCCCTTACAAGGGTAATATTTCCGGACCAAGGCCCTAAGATGGAATCTTGTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR GCA 90 bp AGAGTGCTCCTGACTGAAATCGTCCAGAAGCCCCTCTCAGGTTTATTCTCCAAAATCCTGAGTGAGAACTaGCTTGCTGAGCCCAGCCAA +
Preference number: 4 (lower is better)
Translates to: RVLLTEIVQKPLSGLFSKILSEN*LAEPSQ
Trigger: TTGGCTGGGCTCAGCAAGGCAGTTCTCACTCAGGAT...TTTGGAGAATAAACCTGAGAGGGGCTTCTGGACGATTTCAGTCAGGAGCACTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR GCA 90 bp TCCTCCAACTGTCTCCCCACTGCTACTGCCAGCCATGTGCACTCCATTATGCATAGGATTTATCATCCCTaGTTGCATCCCTGCTTGCTT +
Preference number: 4 (lower is better)
Translates to: SSNCLPTATASHVHSIMHRIYHP*LHPCLL
Trigger: AAGCAAGCAGGGATGCAAGCAGGGATGATAAATCCT...ATGCATAATGGAGTGCACATGGCTGGCAGTAGCAGTGGGGAGACAGTTGGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR CCA 90 bp CCCCTAACCACACACGCCAAACATGTTCCATGGCCAAACTTGTGTCATGAGTCTCCAGAGGGAATGGTGTaGCTGAGCGGATCATCTTTA +
Preference number: 4 (lower is better)
Translates to: PLTTHAKHVPWPNLCHESPEGMV*LSGSSL
Trigger: TAAAGATGATCCGCTCAGCCACACCATTCCCTCTGG...AGACTCATGACACAAGTTTGGCCATGGAACATGTTTGGCGTGTGTGGTTAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533854.6
ENST00000673855.1
CDS-3UTR CCA 90 bp TACGAGGACACAGGACAACAGGTGTCAAGAACCCTGGCACCTACACCGCTGGACAACCTTCCACTTAGGTaGTTTAGACAGATGTCTACA +
Preference number: 4 (lower is better)
Translates to: YEDTGQQVSRTLAPTPLDNLPLR*FRQMST
Trigger: TGTAGACATCTGTCTAAACCACCTAAGTGGAAGGTT...GTCCAGCGGTGTAGGTGCCAGGGTTCTTGACACCTGTTGTCCTGTGTCCTCGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR CCA 90 bp ATGAGCTCATCTCTAGGATCTGAGCCCAATTCCTCCAGCACTTTCCTTGGGGTCTTCGTGGTGAATGAGTaGCTGAATTGGGACCAGAAC +
Preference number: 4 (lower is better)
Translates to: MSSSLGSEPNSSSTFLGVFVVNE*LNWDQN
Trigger: GTTCTGGTCCCAATTCAGCCACTCATTCACCACGAA...GACCCCAAGGAAAGTGCTGGAGGAATTGGGCTCAGATCCTAGAGATGAGCTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR CCA 90 bp TCTACAAGATTCCATCTTAGGGCCTTGGTCCGGAAATATTACCCTTGTAAGGGGTGGGTGGGAGGGGAGTaGGCTTGGAAACCATTTAGG +
Preference number: 4 (lower is better)
Translates to: STRFHLRALVRKYYPCKGWVGGE*AWKPFR
Trigger: CCTAAATGGTTTCCAAGCCCACTCCCCTCCCACCCA...CCCCTTACAAGGGTAATATTTCCGGACCAAGGCCCTAAGATGGAATCTTGTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR CCA 90 bp ATGAAATCACACCGGAGAAACAGCCCAGGACAGAAGCTGTTATATAGTAGGTGCGCAAACCTTCAAGGATaGGGCCACCTGGGGCAGAAA +
Preference number: 4 (lower is better)
Translates to: MKSHRRNSPGQKLLYSRCANLQG*GHLGQK
Trigger: TTTCTGCCCCAGGTGGCCCCATCCTTGAAGGTTTGC...GCACCTACTATATAACAGCTTCTGTCCTGGGCTGTTTCTCCGGTGTGATTTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR CCA 90 bp AGGACTGTAGGTGCCATGCTCTTGGGGGTGCACTTGAAACAGGACTTGCAGAGCAGTGGTTCTCAACCCTaGTTTCACATTAGAACCATC +
Preference number: 4 (lower is better)
Translates to: RTVGAMLLGVHLKQDLQSSGSQP*FHIRTI
Trigger: GATGGTTCTAATGTGAAACCAGGGTTGAGAACCACT...GCTCTGCAAGTCCTGTTTCAAGTGCACCCCCAAGAGCATGGCACCTACAGTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR CCA 90 bp AGGGCCTTGGTCCGGAAATATTACCCTTGTAAGGGGACAGTATCCCCAGGACCAATTCCCATGCAACCCTaGGGAACACTGAATTTCTCA +
Preference number: 4 (lower is better)
Translates to: RALVRKYYPCKGTVSPGPIPMQP*GTLNFS
Trigger: TGAGAAATTCAGTGTTCCCCAGGGTTGCATGGGAAT...TGGTCCTGGGGATACTGTCCCCTTACAAGGGTAATATTTCCGGACCAAGGCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR CCA 90 bp TTCTTTGCACCCCACACACCCATCAACTCAGGAATTTACGCTTCCAGTGCTTCACTGAATGGTTGCTCATaGGGTGGAGGGGGAAGGAAA +
Preference number: 4 (lower is better)
Translates to: FFAPHTPINSGIYASSASLNGCS*GGGGRK
Trigger: TTTCCTTCCCCCTCCACCCCATGAGCAACCATTCAG...TGAAGCACTGGAAGCGTAAATTCCTGAGTTGATGGGTGTGTGGGGTGCAAAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000533854.6
ENST00000673855.1
3UTR CAA 72 bp TTTAGGACTGTAGGTGCCATGCTCTTGGGGGTGCACTaGAAACAGGACTTGCAGAGCAGAGCAGTGCAAATA +
Preference number: 4 (lower is better)
Translates to: FRTVGAMLLGVH*KQDLQSRAVQI
Trigger: TATTTGCACTGCTCTGCTCTGCAAGTCCTGTTTCAAGTGCACCCCCAAGAGCATGGCACCTACAGTCCTAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR TCA 90 bp AATAGGGGCTCAGACAGACTTAATTTAACACAACAAGGTGACACTTCTTGCATCCTGGAGCCACTGCTGTaGTTGGCACTCACATGGGCG +
Preference number: 4 (lower is better)
Translates to: NRGSDRLNLTQQGDTSCILEPLL*LALTWA
Trigger: CGCCCATGTGAGTGCCAATCACAGCAGTGGCTCCAG...GATGCAAGAAGTGTCACCTTGTTGTGTTAAATTAAGTCTGTCTGAGCCCCTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR TCA 90 bp CACCTGTGCACCTACTCCCTAGGCAGAGTGCTGTGTTCCAAAGGCAGGTTAACTATTGTGATGGTGATGTaGTTATTGACACATGCACCC +
Preference number: 4 (lower is better)
Translates to: HLCTYSLGRVLCSKGRLTIVMVM*LLTHAP
Trigger: GGGTGCATGTGTCAATAATCACATCACCATCACAAT...AGTTAACCTGCCTTTGGAACACAGCACTCTGCCTAGGGAGTAGGTGCACAGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR TCA 90 bp AGGGCCTTGGTCCGGAAATATTACCCTTGTAAGGGGACAGTATCCCCAGGACCAGCCCTGATTCGGAGATaGATTTATAGACAGAAAGGA +
Preference number: 4 (lower is better)
Translates to: RALVRKYYPCKGTVSPGPALIRR*IYRQKG
Trigger: TCCTTTCTGTCTATAAATTCATCTCCGAATCAGGGC...TGGTCCTGGGGATACTGTCCCCTTACAAGGGTAATATTTCCGGACCAAGGCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR TCA 90 bp CACCTGTGCACCTACTCCCTAGGCAGAGTGCTGTGTTCCAAAGGCAGGTTAACTCCTGTCTTTGACTATTaGGCCACTTTTCATGGTTCT +
Preference number: 4 (lower is better)
Translates to: HLCTYSLGRVLCSKGRLTPVFDY*ATFHGS
Trigger: AGAACCATGAAAAGTGGCTCAATAGTCAAAGACAGG...AGTTAACCTGCCTTTGGAACACAGCACTCTGCCTAGGGAGTAGGTGCACAGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR TCA 90 bp TATGAGGAAGACCAGGCCTTAAGAAGAGACCGTGTGCAAAGATGTTCTAGTGACAACACAGGATTCTTCTaGAGGTCACTGGTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: YEEDQALRRDRVQRCSSDNTGFF*RSLVGL
Trigger: CAGCCCCACCAGTGACCTTCAGAAGAATCCTGTGTT...GTCACTAGAACATCTTTGCACACGGTCTCTTCTTAAGGCCTGGTCTTCCTCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR TCA 90 bp AATAGGGGCTCAGACAGACTTAATTTAACACAACAAGGTGACACTTCTTGCATCAAGGCTGACCTCCCCTaGGCAGCCAGGATTTCTGCC +
Preference number: 4 (lower is better)
Translates to: NRGSDRLNLTQQGDTSCIKADLP*AARISA
Trigger: GGCAGAAATCCTGGCTGCTCAGGGGAGGTCAGCCTT...GATGCAAGAAGTGTCACCTTGTTGTGTTAAATTAAGTCTGTCTGAGCCCCTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR TCA 90 bp GAGACTGTGCCTGGGTTGAAGATGGTGAATCCATTCTTGGGTGAATCCCAAGCCGAGGAGTCTACTACTTaGGCTTGGTTGCATTTTGCT +
Preference number: 4 (lower is better)
Translates to: ETVPGLKMVNPFLGESQAEESTT*AWLHFA
Trigger: AGCAAAATGCAACCAAGCTCAAGTAGTAGACTCCTC...GGCTTGGGATTCACCCAAGAATGGATTCACCATCTTCAACCCAGGCACAGTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR TCA 90 bp TATGAGGAAGACCAGGCCTTAAGAAGAGACCGTGTGCAAAGATGTTCTAGTGACGAGCAGGGAAGCCTTTaGAATGACAGCCACTGTCTG +
Preference number: 4 (lower is better)
Translates to: YEEDQALRRDRVQRCSSDEQGSL*NDSHCL
Trigger: CAGACAGTGGCTGTCATTTCAAAGGCTTCCCTGCTC...GTCACTAGAACATCTTTGCACACGGTCTCTTCTTAAGGCCTGGTCTTCCTCATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR TCA 90 bp GAGACTGTGCCTGGGTTGAAGATGGTGAATCCATTCTTGGGTGAATCCCAAGCCAGTGACAACCTTAGCTaGAGTCTCAGTGGATGCAAT +
Preference number: 4 (lower is better)
Translates to: ETVPGLKMVNPFLGESQASDNLS*SLSGCN
Trigger: ATTGCATCCACTGAGACTTCAGCTAAGGTTGTCACT...GGCTTGGGATTCACCCAAGAATGGATTCACCATCTTCAACCCAGGCACAGTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR TCA 90 bp GGTGGCGGGATGGTGTTTACGAGGACACAGGACAACAGGTGTCAAGAACCCTGGGATCATTTAGGACACTaGGAAATGCTATGGATTGAA +
Preference number: 4 (lower is better)
Translates to: GGGMVFTRTQDNRCQEPWDHLGH*EMLWIE
Trigger: TTCAATCCATAGCATTTCTCAGTGTCCTAAATGATC...CCAGGGTTCTTGACACCTGTTGTCCTGTGTCCTCGTAAACACCATCCCGCCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR TCA 90 bp TCTACAAGATTCCATCTTAGGGCCTTGGTCCGGAAATATTACCCTTGTAAGGGGCTCATCTCTAGGATCTaGGCCCAATTCCTCCAGCAC +
Preference number: 4 (lower is better)
Translates to: STRFHLRALVRKYYPCKGLISRI*AQFLQH
Trigger: GTGCTGGAGGAATTGGGCTCAGATCCTAGAGATGAG...CCCCTTACAAGGGTAATATTTCCGGACCAAGGCCCTAAGATGGAATCTTGTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR GCA 90 bp TCTACAAGATTCCATCTTAGGGCCTTGGTCCGGAAATATTACCCTTGTAAGGGGGCTGGGCCATGGTGCTaGCCAAATATTTGGCCAAAC +
Preference number: 4 (lower is better)
Translates to: STRFHLRALVRKYYPCKGAGPWC*PNIWPN
Trigger: GTTTGGCCAAATATTTGGGCAGCACCATGGCCCAGC...CCCCTTACAAGGGTAATATTTCCGGACCAAGGCCCTAAGATGGAATCTTGTAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR GCA 90 bp TCTACAAGATTCCATCTTAGGGCCTTGGTCCGGAAATATTACCCTTGTAAGGGGATGAATTTGGCGTCTTaGCCCAGGCACAGCCTTGTC +
Preference number: 4 (lower is better)
Translates to: STRFHLRALVRKYYPCKGMNLAS*PRHSLV
Trigger: GACAAGGCTGTGCCTGGGGCAAGACGCCAAATTCAT...CCCCTTACAAGGGTAATATTTCCGGACCAAGGCCCTAAGATGGAATCTTGTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR GCA 90 bp CATCAACTCAGGAATTTACGCTTCCAGTGCTTCAGGAAACATTGTGAACAAATGCACCCACTGGCCATTTaGTCCATGGTGCCCTGGGAG +
Preference number: 4 (lower is better)
Translates to: HQLRNLRFQCFRKHCEQMHPLAI*SMVPWE
Trigger: CTCCCAGGGCACCATGGAGCAAATGGCCAGTGGGTG...CATTTGTTCACAATGTTTCCTGAAGCACTGGAAGCGTAAATTCCTGAGTTGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533854.6
ENST00000673855.1
CDS-3UTR CCA 90 bp CAGGCAGCCTTCGGAGAGCAGCTGGATTATTCCAAGTCTGCCTTTGTTTGCACTTCCATCTTAGGGCCTTaGTCCGGAAATATTACCCTT +
Preference number: 4 (lower is better)
Translates to: QAAFGEQLDYSKSAFVCTSILGP*SGNITL
Trigger: AAGGGTAATATTTCCGGACCAAGGCCCTAAGATGGA...AGTGCAAACAAAGGCAGACTTGGAATAATCCAGCTGCTCTCCGAAGGCTGCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR CCA 90 bp GACACATGCACCCACCCCCAAACAGGTAATGACCGAGAACCTGTTCCTAAGATGAGTAAGTTCCAGGTGTaGGGGAACCAATGTCAGATT +
Preference number: 4 (lower is better)
Translates to: DTCTHPQTGNDREPVPKMSKFQV*GNQCQI
Trigger: AATCTGACATTGGTTCCCCCACACCTGGAACTTACT...CATCTTAGGAACAGGTTCTCGGTCATTACCTGTTTGGGGGTGGGTGCATGTGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR CCA 90 bp TGGCGGGATGGTGTTTACGAGGACACAGGACAACAGGTGTCAAGAACCCTGGCAAAATTCCACATTCTTTaGAGTGTTGTCATCTGGGTG +
Preference number: 4 (lower is better)
Translates to: WRDGVYEDTGQQVSRTLAKFHIL*SVVIWV
Trigger: CACCCAGATGACAACACTCCAAAGAATGTGGAATTT...TGCCAGGGTTCTTGACACCTGTTGTCCTGTGTCCTCGTAAACACCATCCCGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR CCA 90 bp TGGGCGGGGCTTCTCCCATGTTCCCAGACAATCAGCTTGCCCACAGACTCCAGACTTTGGATGGGAACCTaGATTATTTCTCTGATTATA +
Preference number: 4 (lower is better)
Translates to: WAGLLPCSQTISLPTDSRLWMGT*IISLII
Trigger: TATAATCAGAGAAATAATCCAGGTTCCCATCCAAAG...TCTGGAGTCTGTGGGCAAGCTGATTGTCTGGGAACATGGGAGAAGCCCCGCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR CCA 90 bp CAAGGGGGTGACAGATTGAAAGGAGTCCTTGGAGGTCGGGGAGAGCAGTCAACGCCATTTATCTTTGGATaGGAACCTGGATTATTTCTC +
Preference number: 4 (lower is better)
Translates to: QGGDRLKGVLGGRGEQSTPFIFG*EPGLFL
Trigger: GAGAAATAATCCAGGTTCCCATCCAAAGATAAATGG...CGTTGACTGCTCTCCCCGACCTCCAAGGACTCCTTTCAATCTGTCACCCCCTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR CCA 90 bp ATGAAATCACACCGGAGAAACAGCCCAGGACAGAAGCTGTTATATAGTAGGTGCCTGAATGGTTGCTCATaGGGTGGAGGGGGAAGGAAA +
Preference number: 4 (lower is better)
Translates to: MKSHRRNSPGQKLLYSRCLNGCS*GGGGRK
Trigger: TTTCCTTCCCCCTCCACCCCATGAGCAACCATTCAG...GCACCTACTATATAACAGCTTCTGTCCTGGGCTGTTTCTCCGGTGTGATTTCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000533854.6
ENST00000673855.1
3UTR CAA 72 bp TGTCAGTGTGGCTGGGCCATGGTGCTGCCCAAATATTaGGCCAAACATTTTTCTAACTGTCCTGTGAAGGTG +
Preference number: 4 (lower is better)
Translates to: CQCGWAMVLPKY*AKHFSNCPVKV
Trigger: CACCTTCACAGGACAGTTAGAAAAATGTTTGGCCAAATATTTGGGCAGCACCATGGCCCAGCCACACTGACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR CAA 72 bp ACTATGAGATCATTTCTAAGGATTTATCATCCCTGCTaGCATCCCTGCTTGCTTGGCCCTGACAGTGGGCTG +
Preference number: 4 (lower is better)
Translates to: TMRSFLRIYHPC*HPCLLGPDSGL
Trigger: CAGCCCACTGTCAGGGCCAAGCAAGCAGGGATGCAAGCAGGGATGATAAATCCTTAGAAATGATCTCATAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR TCA 90 bp TCTGAGTTGAGTTTGTACATGTTAACGTTTGGTAAAAGTCTCCTGATTGAGGAGCTGCTTGCTTGGCCCTaGCAGTGGGCTGGAGAACAC +
Preference number: 4 (lower is better)
Translates to: SELSLYMLTFGKSLLIEELLAWP*QWAGEH
Trigger: GTGTTCTCCAGCCCACTGTCAGGGCCAAGCAAGCAG...CTCCTCAATCAGGAGACTTTTACCAAACGTTAACATGTACAAACTCAACTCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR GCA 90 bp GCTGGGAGGAGTCTACTACTTGAGCTTGGTTGCATTTTGCTTGTAAAACTTACACCCAGACAATCAGCTTaGCCACAGACTCCAGACTCC +
Preference number: 4 (lower is better)
Translates to: AGRSLLLELGCILLVKLTPRQSA*PQTPDS
Trigger: GGAGTCTGGAGTCTGTGGGCAAGCTGATTGTCTGGG...TGTAAGTTTTACAAGCAAAATGCAACCAAGCTCAAGTAGTAGACTCCTCCCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR GCA 90 bp CAGATGACCCCTAACCACACACGCCAAACATGTTCCATGGCCAAACTTGTGTCAGAATGGGTGTCACACTaGCTGGTCTTCTGGAAAAAT +
Preference number: 4 (lower is better)
Translates to: QMTPNHTRQTCSMAKLVSEWVSH*LVFWKN
Trigger: ATTTTTCCAGAAGACCAGGCAGTGTGACACCCATTC...TGACACAAGTTTGGCCATGGAACATGTTTGGCGTGTGTGGTTAGGGGTCATCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR GCA 90 bp TTCTTTGCACCCCACACACCCATCAACTCAGGAATTTACGCTTCCAGTGCTTCAGAATACAACAGTCATTaGAAGGGTGCCAGTGGAGAG +
Preference number: 4 (lower is better)
Translates to: FFAPHTPINSGIYASSASEYNSH*KGASGE
Trigger: CTCTCCACTGGCACCCTTGCAATGACTGTTGTATTC...TGAAGCACTGGAAGCGTAAATTCCTGAGTTGATGGGTGTGTGGGGTGCAAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR GCA 90 bp CTGATGAGAACTCAGGCCTCTGAACCAGCAGGACAGAGAGCCCACGCATGCAAAATCTTGGACAAGCACTaGCATTTTAAAGTTCACCTT +
Preference number: 4 (lower is better)
Translates to: LMRTQASEPAGQRAHACKILDKH*HFKVHL
Trigger: AAGGTGAACTTTAAAATGGCAGTGCTTGTCCAAGAT...TTTGCATGCGTGGGCTCTCTGTCCTGCTGGTTCAGAGGCCTGAGTTCTCATCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR GCA 90 bp GCAGAGCAGAGCAGTGCAAATATTACCAGCTGTGCGGTCATGAGCAAGTCCCTATATTCTTCCTTGGGGTaGTGCAAGTATCTGATCTCT +
Preference number: 4 (lower is better)
Translates to: AEQSSANITSCAVMSKSLYSSLG*CKYLIS
Trigger: AGAGATCAGATACTTGCAGCACCCCAAGGAAGAATA...TAGGGACTTGCTCATGACCGCACAGCTGGTAATATTTGCACTGCTCTGCTCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR GCA 90 bp GACACATGCACCCACCCCCAAACAGGTAATGACCGAGAACCTGTTCCTAAGATGCTACTGCCAGCCATGTaGACTCCATTATGCATAAAT +
Preference number: 4 (lower is better)
Translates to: DTCTHPQTGNDREPVPKMLLPAM*TPLCIN
Trigger: ATTTATGCATAATGGAGTGCACATGGCTGGCAGTAG...CATCTTAGGAACAGGTTCTCGGTCATTACCTGTTTGGGGGTGGGTGCATGTGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR GCA 90 bp GACACATGCACCCACCCCCAAACAGGTAATGACCGAGAACCTGTTCCTAAGATGTCTCCCTCCTTTTCTTaGATTTTGTTTGGGATGCCA +
Preference number: 4 (lower is better)
Translates to: DTCTHPQTGNDREPVPKMSPSFS*ILFGMP
Trigger: TGGCATCCCAAACAAAATGCAAGAAAAGGAGGGAGA...CATCTTAGGAACAGGTTCTCGGTCATTACCTGTTTGGGGGTGGGTGCATGTGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR GCA 90 bp ATGTCTGAGTCCACAATCAACTTGTATTTAGGAGTGGATTCTACTTTTTCCAGGGCTTGCATCCCTGCTTaGTTGGCCCTGACAGTGGGC +
Preference number: 4 (lower is better)
Translates to: MSESTINLYLGVDSTFSRACIPA*LALTVG
Trigger: GCCCACTGTCAGGGCCAAGCAAGCAGGGATGCAAGC...CCTGGAAAAAGTAGAATCCACTCCTAAATACAAGTTGATTGTGGACTCAGACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR CCA 90 bp TATATATTAAACACATCTGAATGGTTGCTCATGGGGTGGAGGGGGAAGGAAAAAGGCTCAGGGGTCACCTaGAGAGAACAGGAAGGGTTG +
Preference number: 4 (lower is better)
Translates to: YILNTSEWLLMGWRGKEKGSGVT*REQEGL
Trigger: CAACCCTTCCTGTTCTCTCCAGGTGACCCCTGAGCC...TTTTTCCTTCCCCCTCCACCCCATGAGCAACCATTCAGATGTGTTTAATATATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR CCA 90 bp CACCTGTGCACCTACTCCCTAGGCAGAGTGCTGTGTTCCAAAGGCAGGTTAACTAATGATTGTCCAGTTTaGAAACGCTATCTGTCTCCA +
Preference number: 4 (lower is better)
Translates to: HLCTYSLGRVLCSKGRLTNDCPV*KRYLSP
Trigger: TGGAGACAGATAGCGTTTCCAAACTGGACAATCATT...AGTTAACCTGCCTTTGGAACACAGCACTCTGCCTAGGGAGTAGGTGCACAGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR CCA 90 bp GGGGTGCACTTGAAACAGGACTTGCAGAGCAGAGCAGTGCAAATATTACCAGCTTCATTGACTCACCCATaGGACAAGAAAGAGGGTAGA +
Preference number: 4 (lower is better)
Translates to: GVHLKQDLQSRAVQILPASLTHP*DKKEGR
Trigger: TCTACCCTCTTTCTTGTCCCATGGGTGAGTCAATGA...AGCTGGTAATATTTGCACTGCTCTGCTCTGCAAGTCCTGTTTCAAGTGCACCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR CCA 90 bp GGGTGGCGGGATGGTGTTTACGAGGACACAGGACAACAGGTGTCAAGAACCCTGTGCTGCCCAAATATTTaGCCAAACATTTTTCTAACT +
Preference number: 4 (lower is better)
Translates to: GWRDGVYEDTGQQVSRTLCCPNI*PNIFLT
Trigger: AGTTAGAAAAATGTTTGGCCAAATATTTGGGCAGCA...CAGGGTTCTTGACACCTGTTGTCCTGTGTCCTCGTAAACACCATCCCGCCACCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR CCA 90 bp GGGTGGCGGGATGGTGTTTACGAGGACACAGGACAACAGGTGTCAAGAACCCTGGCTACTCACCTTATGTaGTTTAATTTAGTCTCTTCA +
Preference number: 4 (lower is better)
Translates to: GWRDGVYEDTGQQVSRTLATHLM*FNLVSS
Trigger: TGAAGAGACTAAATTAAACCACATAAGGTGAGTAGC...CAGGGTTCTTGACACCTGTTGTCCTGTGTCCTCGTAAACACCATCCCGCCACCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR CCA 90 bp TATATATTAAACACATCTGAATGGTTGCTCATGGGGTGGAGGGGGAAGGAAAAATGGCCATTTGCTCCATaGTGCCCTGGGAGTCAGCCA +
Preference number: 4 (lower is better)
Translates to: YILNTSEWLLMGWRGKEKWPFAP*CPGSQP
Trigger: TGGCTGACTCCCAGGGCACCATGGAGCAAATGGCCA...TTTTTCCTTCCCCCTCCACCCCATGAGCAACCATTCAGATGTGTTTAATATATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000533854.6
ENST00000673855.1
CDS-3UTR CCA 90 bp AATAGGGGCTCAGACAGACTTAATTTAACACAACAAGGTGACACTTCTTGCATCAGAGGGGTGGCGGGATaGTGTTTACGAGGACACAGG +
Preference number: 4 (lower is better)
Translates to: NRGSDRLNLTQQGDTSCIRGVAG*CLRGHR
Trigger: CCTGTGTCCTCGTAAACACCATCCCGCCACCCCTCT...GATGCAAGAAGTGTCACCTTGTTGTGTTAAATTAAGTCTGTCTGAGCCCCTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000533854.6
ENST00000673855.1
CDS-3UTR TCA 90 bp GCAGAGCAGAGCAGTGCAAATATTACCAGCTGTGCGGTCATGAGCAAGTCCCTACTGCTGAGCACAAAATaGATTATTCAAAGACCAGTG +
Preference number: 4 (lower is better)
Translates to: AEQSSANITSCAVMSKSLLLSTK*IIQRPV
Trigger: CACTGGTCTTTGAATAATTCATTTTGTGCTCAGCAG...TAGGGACTTGCTCATGACCGCACAGCTGGTAATATTTGCACTGCTCTGCTCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR TCA 90 bp ATGAAATCACACCGGAGAAACAGCCCAGGACAGAAGCTGTTATATAGTAGGTGCCTGCTGGGAACGTTGTaGTACGTGGTTCCTTTATTG +
Preference number: 4 (lower is better)
Translates to: MKSHRRNSPGQKLLYSRCLLGTL*YVVPLL
Trigger: CAATAAAGGAACCACGTATCACAACGTTCCCAGCAG...GCACCTACTATATAACAGCTTCTGTCCTGGGCTGTTTCTCCGGTGTGATTTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR TCA 90 bp ATGAGCTCATCTCTAGGATCTGAGCCCAATTCCTCCAGCACTTTCCTTGGGGTCAGAAATGCTATGGATTaGATAGCTGCTACTCACCTT +
Preference number: 4 (lower is better)
Translates to: MSSSLGSEPNSSSTFLGVRNAMD*IAATHL
Trigger: AAGGTGAGTAGCAGCTATTCAATCCATAGCATTTCT...GACCCCAAGGAAAGTGCTGGAGGAATTGGGCTCAGATCCTAGAGATGAGCTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR TCA 90 bp GCTGGGAGGAGTCTACTACTTGAGCTTGGTTGCATTTTGCTTGTAAAACTTACAGTGAGGAGGTGCAATTaGTGGGTTCCTAGAGCAGCA +
Preference number: 4 (lower is better)
Translates to: AGRSLLLELGCILLVKLTVRRCN*WVPRAA
Trigger: TGCTGCTCTAGGAACCCATCAATTGCACCTCCTCAC...TGTAAGTTTTACAAGCAAAATGCAACCAAGCTCAAGTAGTAGACTCCTCCCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR GCA 90 bp AATAGGGGCTCAGACAGACTTAATTTAACACAACAAGGTGACACTTCTTGCATCCAGAGAGCCCACGCATaGAAACCTTCAAGGATGGGG +
Preference number: 4 (lower is better)
Translates to: NRGSDRLNLTQQGDTSCIQRAHA*KPSRMG
Trigger: CCCCATCCTTGAAGGTTTGCATGCGTGGGCTCTCTG...GATGCAAGAAGTGTCACCTTGTTGTGTTAAATTAAGTCTGTCTGAGCCCCTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR GCA 90 bp ATGTCTGAGTCCACAATCAACTTGTATTTAGGAGTGGATTCTACTTTTTCCAGGCCATTTGCTCCATGGTaGCCTGGGAGTCAGCCAGGA +
Preference number: 4 (lower is better)
Translates to: MSESTINLYLGVDSTFSRPFAPW*PGSQPG
Trigger: TCCTGGCTGACTCCCAGGGCACCATGGAGCAAATGG...CCTGGAAAAAGTAGAATCCACTCCTAAATACAAGTTGATTGTGGACTCAGACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR CCA 90 bp TTCTTTGCACCCCACACACCCATCAACTCAGGAATTTACGCTTCCAGTGCTTCATCAGCTGGGTGTTCATaGGCATCACATATTCTATGG +
Preference number: 4 (lower is better)
Translates to: FFAPHTPINSGIYASSASSAGCS*ASHILW
Trigger: CCATAGAATATGTGATGCCCATGAACACCCAGCTGA...TGAAGCACTGGAAGCGTAAATTCCTGAGTTGATGGGTGTGTGGGGTGCAAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533854.6
ENST00000673855.1
CDS-3UTR CCA 90 bp AGAGTGCTCCTGACTGAAATCGTCCAGAAGCCCCTCTCAGGTTTATTCTCCAAACACCAAAAACAAGCCTaGCACAGTGACAGAGAAAGA +
Preference number: 4 (lower is better)
Translates to: RVLLTEIVQKPLSGLFSKHQKQA*HSDRER
Trigger: TCTTTCTCTGTCACTGTGCCAGGCTTGTTTTTGGTG...TTTGGAGAATAAACCTGAGAGGGGCTTCTGGACGATTTCAGTCAGGAGCACTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR CCA 90 bp ATGAAATCACACCGGAGAAACAGCCCAGGACAGAAGCTGTTATATAGTAGGTGCTCACTGATAAGCCTGTaGCAACCTATGGATTTCCCC +
Preference number: 4 (lower is better)
Translates to: MKSHRRNSPGQKLLYSRCSLISL*QPMDFP
Trigger: GGGGAAATCCATAGGTTGCCACAGGCTTATCAGTGA...GCACCTACTATATAACAGCTTCTGTCCTGGGCTGTTTCTCCGGTGTGATTTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR CCA 90 bp TTATTCCAAGTCTGCCTTTGTTTGCACTCAAGCTGCACCAGGTGTCCTCAAATCCTTGCTACCCACTCGTaGATAAAGGCAGCAGAATTC +
Preference number: 4 (lower is better)
Translates to: LFQVCLCLHSSCTRCPQILATHS*IKAAEF
Trigger: GAATTCTGCTGCCTTTATCCACGAGTGGGTAGCAAG...GATTTGAGGACACCTGGTGCAGCTTGAGTGCAAACAAAGGCAGACTTGGAATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR CCA 90 bp CAGATGACCCCTAACCACACACGCCAAACATGTTCCATGGCCAAACTTGTGTCATCAGAATCTCCAGGCTaGGAGAATAACTTACTAGTC +
Preference number: 4 (lower is better)
Translates to: QMTPNHTRQTCSMAKLVSSESPG*ENNLLV
Trigger: GACTAGTAAGTTATTCTCCCAGCCTGGAGATTCTGA...TGACACAAGTTTGGCCATGGAACATGTTTGGCGTGTGTGGTTAGGGGTCATCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR CCA 90 bp TCTACAAGATTCCATCTTAGGGCCTTGGTCCGGAAATATTACCCTTGTAAGGGGGTATCTGAAATAGGGTaGGAGGTGTATGAGTGTGGG +
Preference number: 4 (lower is better)
Translates to: STRFHLRALVRKYYPCKGVSEIG*EVYECG
Trigger: CCCACACTCATACACCTCCCACCCTATTTCAGATAC...CCCCTTACAAGGGTAATATTTCCGGACCAAGGCCCTAAGATGGAATCTTGTAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR CCA 90 bp ATGTCTGAGTCCACAATCAACTTGTATTTAGGAGTGGATTCTACTTTTTCCAGGCCATGGCACACCCACTaGCCATTTGCTCCATGGTGC +
Preference number: 4 (lower is better)
Translates to: MSESTINLYLGVDSTFSRPWHTH*PFAPWC
Trigger: GCACCATGGAGCAAATGGCCAGTGGGTGTGCCATGG...CCTGGAAAAAGTAGAATCCACTCCTAAATACAAGTTGATTGTGGACTCAGACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR CCA 90 bp TCTGAGTTGAGTTTGTACATGTTAACGTTTGGTAAAAGTCTCCTGATTGAGGAGAGAGCAGTCAACGCATaGGGACAGTCCCCACACCTG +
Preference number: 4 (lower is better)
Translates to: SELSLYMLTFGKSLLIEERAVNA*GQSPHL
Trigger: CAGGTGTGGGGACTGTCCCCATGCGTTGACTGCTCT...CTCCTCAATCAGGAGACTTTTACCAAACGTTAACATGTACAAACTCAACTCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR CAA 72 bp AGCTGTTGCATCTTGATAGGATGTTTGGAATCACTGTaGCCATCTTGCTACCCACTCGTGGATAAAGGCAGC +
Preference number: 4 (lower is better)
Translates to: SCCILIGCLESL*PSCYPLVDKGS
Trigger: GCTGCCTTTATCCACGAGTGGGTAGCAAGATGGCAACAGTGATTCCAAACATCCTATCAAGATGCAACAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR TCA 90 bp AATAGGGGCTCAGACAGACTTAATTTAACACAACAAGGTGACACTTCTTGCATCAGTGCAGGGACATCTTaGTCTCGGTGCTCTGGTTCT +
Preference number: 4 (lower is better)
Translates to: NRGSDRLNLTQQGDTSCISAGTS*SRCSGS
Trigger: AGAACCAGAGCACCGAGATCAAGATGTCCCTGCACT...GATGCAAGAAGTGTCACCTTGTTGTGTTAAATTAAGTCTGTCTGAGCCCCTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533854.6
ENST00000673855.1
CDS-3UTR TCA 90 bp AATAGGGGCTCAGACAGACTTAATTTAACACAACAAGGTGACACTTCTTGCATCTCACATATTCTATGGTaGAGCAACGCCCCCGCTCCT +
Preference number: 4 (lower is better)
Translates to: NRGSDRLNLTQQGDTSCISHILW*SNAPAP
Trigger: AGGAGCGGGGGCGTTGCTTCACCATAGAATATGTGA...GATGCAAGAAGTGTCACCTTGTTGTGTTAAATTAAGTCTGTCTGAGCCCCTATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000533854.6
ENST00000673855.1
CDS-3UTR TCA 90 bp TCTACAAGATTCCATCTTAGGGCCTTGGTCCGGAAATATTACCCTTGTAAGGGGACCCATACTTGTAGTTaGAGTAGGTCTCTGCATCCT +
Preference number: 4 (lower is better)
Translates to: STRFHLRALVRKYYPCKGTHTCS*SRSLHP
Trigger: AGGATGCAGAGACCTACTTCAACTACAAGTATGGGT...CCCCTTACAAGGGTAATATTTCCGGACCAAGGCCCTAAGATGGAATCTTGTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR TCA 90 bp ATGTCTGAGTCCACAATCAACTTGTATTTAGGAGTGGATTCTACTTTTTCCAGGCTTACGGAGGGTAATTaGAACCCTCCTGGCTCCGGT +
Preference number: 4 (lower is better)
Translates to: MSESTINLYLGVDSTFSRLTEGN*NPPGSG
Trigger: ACCGGAGCCAGGAGGGTTTCAATTACCCTCCGTAAG...CCTGGAAAAAGTAGAATCCACTCCTAAATACAAGTTGATTGTGGACTCAGACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR TCA 90 bp TATGAGGAAGACCAGGCCTTAAGAAGAGACCGTGTGCAAAGATGTTCTAGTGACTGTCACACGAGCATATaGAAGTGGTTCACTGAGTGT +
Preference number: 4 (lower is better)
Translates to: YEEDQALRRDRVQRCSSDCHTSI*KWFTEC
Trigger: ACACTCAGTGAACCACTTTCATATGCTCGTGTGACA...GTCACTAGAACATCTTTGCACACGGTCTCTTCTTAAGGCCTGGTCTTCCTCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR TCA 90 bp ATGAGCTCATCTCTAGGATCTGAGCCCAATTCCTCCAGCACTTTCCTTGGGGTCTTTAACACAACAAGGTaGCACTTCTTGCATCTAAGT +
Preference number: 4 (lower is better)
Translates to: MSSSLGSEPNSSSTFLGVFNTTR*HFLHLS
Trigger: ACTTAGATGCAAGAAGTGTCACCTTGTTGTGTTAAA...GACCCCAAGGAAAGTGCTGGAGGAATTGGGCTCAGATCCTAGAGATGAGCTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533854.6
ENST00000673855.1
CDS-3UTR TCA 90 bp TATATATTAAACACATCTGAATGGTTGCTCATGGGGTGGAGGGGGAAGGAAAAAGTGAGGAGGTGCAATTaGTGGGTTCCTAGAGCAGCA +
Preference number: 4 (lower is better)
Translates to: YILNTSEWLLMGWRGKEKVRRCN*WVPRAA
Trigger: TGCTGCTCTAGGAACCCATCAATTGCACCTCCTCAC...TTTTTCCTTCCCCCTCCACCCCATGAGCAACCATTCAGATGTGTTTAATATATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000533854.6
ENST00000673855.1
CDS-3UTR GCA 90 bp TCTACAAGATTCCATCTTAGGGCCTTGGTCCGGAAATATTACCCTTGTAAGGGGTTTCTGCCAGGAGACTaGAAGTTTGGACTTGAACTG +
Preference number: 4 (lower is better)
Translates to: STRFHLRALVRKYYPCKGFLPGD*KFGLEL
Trigger: CAGTTCAAGTCCAAACTTGCAGTCTCCTGGCAGAAA...CCCCTTACAAGGGTAATATTTCCGGACCAAGGCCCTAAGATGGAATCTTGTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR CCA 90 bp CATCAACTCAGGAATTTACGCTTCCAGTGCTTCAGGAAACATTGTGAACAAATGGACTCGGATGTCAGCTaGGTGTTCATGGGCATCACA +
Preference number: 4 (lower is better)
Translates to: HQLRNLRFQCFRKHCEQMDSDVS*VFMGIT
Trigger: TGTGATGCCCATGAACACCCAGCTGACATCCGAGTC...CATTTGTTCACAATGTTTCCTGAAGCACTGGAAGCGTAAATTCCTGAGTTGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533854.6
ENST00000673855.1
CDS-3UTR CCA 90 bp TCTGAGTTGAGTTTGTACATGTTAACGTTTGGTAAAAGTCTCCTGATTGAGGAGGACAGGTGTGTCATGTaGAGGGACAGGGGTGACAAG +
Preference number: 4 (lower is better)
Translates to: SELSLYMLTFGKSLLIEEDRCVM*RDRGDK
Trigger: CTTGTCACCCCTGTCCCTCCACATGACACACCTGTC...CTCCTCAATCAGGAGACTTTTACCAAACGTTAACATGTACAAACTCAACTCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR CCA 90 bp ATGTCTGAGTCCACAATCAACTTGTATTTAGGAGTGGATTCTACTTTTTCCAGGGCACACAGGGAGTCCTaGCTTCACACACCAGAAGGT +
Preference number: 4 (lower is better)
Translates to: MSESTINLYLGVDSTFSRAHRES*LHTPEG
Trigger: ACCTTCTGGTGTGTGAAGCCAGGACTCCCTGTGTGC...CCTGGAAAAAGTAGAATCCACTCCTAAATACAAGTTGATTGTGGACTCAGACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR CCA 90 bp TATATATTAAACACATCTGAATGGTTGCTCATGGGGTGGAGGGGGAAGGAAAAATACACCGCTGGACTTTaGATTTCTAGCCTGGCAGCC +
Preference number: 4 (lower is better)
Translates to: YILNTSEWLLMGWRGKEKYTAGL*ISSLAA
Trigger: GGCTGCCAGGCTAGAAATCCAAAGTCCAGCGGTGTA...TTTTTCCTTCCCCCTCCACCCCATGAGCAACCATTCAGATGTGTTTAATATATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000533854.6
ENST00000673855.1
3UTR CAA 72 bp GAGAAAAAGACCACCCTTCTCTTCCCTCTGAAGCTGTaGCATCTTGATAGGATGTTTGGAATCACTGTTGCC +
Preference number: 4 (lower is better)
Translates to: EKKTTLLFPLKL*HLDRMFGITVA
Trigger: GGCAACAGTGATTCCAAACATCCTATCAAGATGCAACAGCTTCAGAGGGAAGAGAAGGGTGGTCTTTTTCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR CAA 72 bp GGAAAATCCAGAGTTTTCCTGGAGCCATTTCCAACATaGGTTGGCATCATGAGTAGAGATGGGAGAGAAGGA +
Preference number: 4 (lower is better)
Translates to: GKSRVFLEPFPT*VGIMSRDGREG
Trigger: TCCTTCTCTCCCATCTCTACTCATGATGCCAACCAATGTTGGAAATGGCTCCAGGAAAACTCTGGATTTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR TCA 90 bp ATGTCTGAGTCCACAATCAACTTGTATTTAGGAGTGGATTCTACTTTTTCCAGGCACTGCTACCATGGATaGACCCACACTCACAGTGCT +
Preference number: 4 (lower is better)
Translates to: MSESTINLYLGVDSTFSRHCYHG*THTHSA
Trigger: AGCACTGTGAGTGTGGGTTCATCCATGGTAGCAGTG...CCTGGAAAAAGTAGAATCCACTCCTAAATACAAGTTGATTGTGGACTCAGACAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR TCA 90 bp TTCTTTGCACCCCACACACCCATCAACTCAGGAATTTACGCTTCCAGTGCTTCATATATTAAACACATCTaGATGGTTGCTCATGGGGTG +
Preference number: 4 (lower is better)
Translates to: FFAPHTPINSGIYASSASYIKHI*MVAHGV
Trigger: CACCCCATGAGCAACCATTCAGATGTGTTTAATATA...TGAAGCACTGGAAGCGTAAATTCCTGAGTTGATGGGTGTGTGGGGTGCAAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000533854.6
ENST00000673855.1
CDS-3UTR GCA 90 bp TTATTCTTCCTTGGGGTGCTGCAAGTATCTGATCTCTTAGCTAAATTCCACATTGTGCACGAGTCCAGCTaGATCTGTGTAAGGAGCTTG +
Preference number: 4 (lower is better)
Translates to: LFFLGVLQVSDLLAKFHIVHESS*ICVRSL
Trigger: CAAGCTCCTTACACAGATGCAGCTGGACTCGTGCAC...AATGTGGAATTTAGCTAAGAGATCAGATACTTGCAGCACCCCAAGGAAGAATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR GCA 90 bp ATGTCTGAGTCCACAATCAACTTGTATTTAGGAGTGGATTCTACTTTTTCCAGGCAAGACTTGGAGAGCTaGCAATTGGCCCTCATACCC +
Preference number: 4 (lower is better)
Translates to: MSESTINLYLGVDSTFSRQDLES*QLALIP
Trigger: GGGTATGAGGGCCAATTGGCAGCTCTCCAAGTCTTG...CCTGGAAAAAGTAGAATCCACTCCTAAATACAAGTTGATTGTGGACTCAGACAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR GCA 90 bp TTATTCTTCCTTGGGGTGCTGCAAGTATCTGATCTCTTAGCTAAATTCCACATTGGCCTCAGGCACAGGTaGATTAGACAGAATCCACTC +
Preference number: 4 (lower is better)
Translates to: LFFLGVLQVSDLLAKFHIGLRHR*IRQNPL
Trigger: GAGTGGATTCTGTCTAATGCACCTGTGCCTGAGGCC...AATGTGGAATTTAGCTAAGAGATCAGATACTTGCAGCACCCCAAGGAAGAATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR GCA 90 bp TCTGAGTTGAGTTTGTACATGTTAACGTTTGGTAAAAGTCTCCTGATTGAGGAGCAGAGACCTCAGCTCTaGCAGTACCAAGGACATGAG +
Preference number: 4 (lower is better)
Translates to: SELSLYMLTFGKSLLIEEQRPQL*QYQGHE
Trigger: CTCATGTCCTTGGTACTGGCAGAGCTGAGGTCTCTG...CTCCTCAATCAGGAGACTTTTACCAAACGTTAACATGTACAAACTCAACTCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR GCA 90 bp CAGGCAGCCTTCGGAGAGCAGCTGGATTATTCCAAGTCTGCCTTTGTTTGCACTCTACTTGAGCTTGGTTaGATTTTGCTTGTAAAACTT +
Preference number: 4 (lower is better)
Translates to: QAAFGEQLDYSKSAFVCTLLELG*ILLVKL
Trigger: AAGTTTTACAAGCAAAATGCAACCAAGCTCAAGTAG...AGTGCAAACAAAGGCAGACTTGGAATAATCCAGCTGCTCTCCGAAGGCTGCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR GCA 90 bp CAGATGACCCCTAACCACACACGCCAAACATGTTCCATGGCCAAACTTGTGTCAGAGTCTTTCTCCAGTTaGTTCAATTTATCCAGAACA +
Preference number: 4 (lower is better)
Translates to: QMTPNHTRQTCSMAKLVSESFSS*FNLSRT
Trigger: TGTTCTGGATAAATTGAAGCAACTGGAGAAAGACTC...TGACACAAGTTTGGCCATGGAACATGTTTGGCGTGTGTGGTTAGGGGTCATCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533854.6
ENST00000673855.1
CDS-3UTR CCA 90 bp TATATATTAAACACATCTGAATGGTTGCTCATGGGGTGGAGGGGGAAGGAAAAAAGGCACTCATCTTCCTaGACCGTTGCTGTGCAACTA +
Preference number: 4 (lower is better)
Translates to: YILNTSEWLLMGWRGKEKRHSSS*TVAVQL
Trigger: TAGTTGCACAGCAACGGTCCAGGAAGATGAGTGCCT...TTTTTCCTTCCCCCTCCACCCCATGAGCAACCATTCAGATGTGTTTAATATATA
44% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000533854.6
ENST00000673855.1
CDS-3UTR CCA 90 bp AATAGGGGCTCAGACAGACTTAATTTAACACAACAAGGTGACACTTCTTGCATCCCCCTTGCCAGATTGTaGTTTAGGAATGGGCATGTG +
Preference number: 4 (lower is better)
Translates to: NRGSDRLNLTQQGDTSCIPLARL*FRNGHV
Trigger: CACATGCCCATTCCTAAACCACAATCTGGCAAGGGG...GATGCAAGAAGTGTCACCTTGTTGTGTTAAATTAAGTCTGTCTGAGCCCCTATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR CAA 72 bp ACAAGGAGAAAGGAGTTCAGAAGGAACACTGACAGCTaGACATGTCTAAGTCAGCCAGACCTCTATATCAGA +
Preference number: 4 (lower is better)
Translates to: TRRKEFRRNTDS*TCLSQPDLYIR
Trigger: TCTGATATAGAGGTCTGGCTGACTTAGACATGTCAAGCTGTCAGTGTTCCTTCTGAACTCCTTTCTCCTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR TCA 90 bp TATGAGGAAGACCAGGCCTTAAGAAGAGACCGTGTGCAAAGATGTTCTAGTGACAATTCATTTGTAGAATaGCCCTCAGTACCTCAGAAC +
Preference number: 4 (lower is better)
Translates to: YEEDQALRRDRVQRCSSDNSFVE*PSVPQN
Trigger: GTTCTGAGGTACTGAGGGTCATTCTACAAATGAATT...GTCACTAGAACATCTTTGCACACGGTCTCTTCTTAAGGCCTGGTCTTCCTCATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR TCA 90 bp TTATTCTTCCTTGGGGTGCTGCAAGTATCTGATCTCTTAGCTAAATTCCACATTAGGGTGGGAGGTGTATaGGTGTGGGTGGATTTAAAG +
Preference number: 4 (lower is better)
Translates to: LFFLGVLQVSDLLAKFHIRVGGV*VWVDLK
Trigger: CTTTAAATCCACCCACACTCATACACCTCCCACCCT...AATGTGGAATTTAGCTAAGAGATCAGATACTTGCAGCACCCCAAGGAAGAATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR GCA 90 bp TCTGAGTTGAGTTTGTACATGTTAACGTTTGGTAAAAGTCTCCTGATTGAGGAGTGGCCCAAGTTAGTCTaGTGGGAACGTTGTGATACG +
Preference number: 4 (lower is better)
Translates to: SELSLYMLTFGKSLLIEEWPKLV*WERCDT
Trigger: CGTATCACAACGTTCCCAGCAGACTAACTTGGGCCA...CTCCTCAATCAGGAGACTTTTACCAAACGTTAACATGTACAAACTCAACTCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR GCA 90 bp TTCTTTGCACCCCACACACCCATCAACTCAGGAATTTACGCTTCCAGTGCTTCAAATTTACGCTTCCAGTaGTTCAGGAAACATTGTGAA +
Preference number: 4 (lower is better)
Translates to: FFAPHTPINSGIYASSASNLRFQ*FRKHCE
Trigger: TTCACAATGTTTCCTGAAGCACTGGAAGCGTAAATT...TGAAGCACTGGAAGCGTAAATTCCTGAGTTGATGGGTGTGTGGGGTGCAAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533854.6
ENST00000673855.1
CDS-3UTR CCA 90 bp TTATTCTTCCTTGGGGTGCTGCAAGTATCTGATCTCTTAGCTAAATTCCACATTTTGATCTCGGTGCTCTaGTTCTGGGGCACAATCACA +
Preference number: 4 (lower is better)
Translates to: LFFLGVLQVSDLLAKFHILISVL*FWGTIT
Trigger: TGTGATTGTGCCCCAGAACCAGAGCACCGAGATCAA...AATGTGGAATTTAGCTAAGAGATCAGATACTTGCAGCACCCCAAGGAAGAATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR CCA 90 bp TTATTCTTCCTTGGGGTGCTGCAAGTATCTGATCTCTTAGCTAAATTCCACATTCCAGAGGGAATGGTGTaGCTGAGCGGATCATCTTTA +
Preference number: 4 (lower is better)
Translates to: LFFLGVLQVSDLLAKFHIPEGMV*LSGSSL
Trigger: TAAAGATGATCCGCTCAGCCACACCATTCCCTCTGG...AATGTGGAATTTAGCTAAGAGATCAGATACTTGCAGCACCCCAAGGAAGAATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR CCA 90 bp TATGAGGAAGACCAGGCCTTAAGAAGAGACCGTGTGCAAAGATGTTCTAGTGACGCGGTGAGGAGAACATaGTTTTGGTATTATTCTGTA +
Preference number: 4 (lower is better)
Translates to: YEEDQALRRDRVQRCSSDAVRRT*FWYYSV
Trigger: TACAGAATAATACCAAAACCATGTTCTCCTCACCGC...GTCACTAGAACATCTTTGCACACGGTCTCTTCTTAAGGCCTGGTCTTCCTCATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR CCA 90 bp ATGAAATCACACCGGAGAAACAGCCCAGGACAGAAGCTGTTATATAGTAGGTGCTCCCCCATTTATCTTTaGATGGGAACCTGGATTATT +
Preference number: 4 (lower is better)
Translates to: MKSHRRNSPGQKLLYSRCSPIYL*MGTWII
Trigger: AATAATCCAGGTTCCCATCCAAAGATAAATGGGGGA...GCACCTACTATATAACAGCTTCTGTCCTGGGCTGTTTCTCCGGTGTGATTTCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR CAA 72 bp TTTAGACAGATGTCTACAAGATTCCATCTTAGGGCCTaGGTCCGGAAATATTACCCTTGTAAGGGGACAGTA +
Preference number: 4 (lower is better)
Translates to: FRQMSTRFHLRA*VRKYYPCKGTV
Trigger: TACTGTCCCCTTACAAGGGTAATATTTCCGGACCAAGGCCCTAAGATGGAATCTTGTAGACATCTGTCTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR CAA 72 bp AGACCGAACCTAGTGATGTCTGAGTCCACAATCAACTaGTATTTAGGAGTGGATTCTACTTTTTCCAGGTGC +
Preference number: 4 (lower is better)
Translates to: RPNLVMSESTIN*YLGVDSTFSRC
Trigger: GCACCTGGAAAAAGTAGAATCCACTCCTAAATACAAGTTGATTGTGGACTCAGACATCACTAGGTTCGGTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR CAA 72 bp TGTAGAGGCTTTCAGGAAACGACACATCACCGTTGTTaGCATTTAGACCTTTCCTTCCCCCATTTATCTTTG +
Preference number: 4 (lower is better)
Translates to: CRGFQETTHHRC*HLDLSFPHLSL
Trigger: CAAAGATAAATGGGGGAAGGAAAGGTCTAAATGCAAACAACGGTGATGTGTCGTTTCCTGAAAGCCTCTACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR TCA 90 bp CATCAACTCAGGAATTTACGCTTCCAGTGCTTCAGGAAACATTGTGAACAAATGTCCTTTACTTTGCGGTaGGGAGAACATGGTTTTGGT +
Preference number: 4 (lower is better)
Translates to: HQLRNLRFQCFRKHCEQMSFTLR*GEHGFG
Trigger: ACCAAAACCATGTTCTCCTCACCGCAAAGTAAAGGA...CATTTGTTCACAATGTTTCCTGAAGCACTGGAAGCGTAAATTCCTGAGTTGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR TCA 90 bp GCTGGGAGGAGTCTACTACTTGAGCTTGGTTGCATTTTGCTTGTAAAACTTACAGAACCTAGTGATGTCTaGGTCCACAATCAACTTGTA +
Preference number: 4 (lower is better)
Translates to: AGRSLLLELGCILLVKLTEPSDV*VHNQLV
Trigger: TACAAGTTGATTGTGGACTCAGACATCACTAGGTTC...TGTAAGTTTTACAAGCAAAATGCAACCAAGCTCAAGTAGTAGACTCCTCCCAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR TCA 90 bp AATAGGGGCTCAGACAGACTTAATTTAACACAACAAGGTGACACTTCTTGCATCATGAAAGTGGTTCACTaGGTGTGGGGAGAAAGTCAA +
Preference number: 4 (lower is better)
Translates to: NRGSDRLNLTQQGDTSCIMKVVH*VWGESQ
Trigger: TTGACTTTCTCCCCACACTCAGTGAACCACTTTCAT...GATGCAAGAAGTGTCACCTTGTTGTGTTAAATTAAGTCTGTCTGAGCCCCTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR TCA 90 bp ATGAAATCACACCGGAGAAACAGCCCAGGACAGAAGCTGTTATATAGTAGGTGCTTTAACACAACAAGGTaGCACTTCTTGCATCTAAGT +
Preference number: 4 (lower is better)
Translates to: MKSHRRNSPGQKLLYSRCFNTTR*HFLHLS
Trigger: ACTTAGATGCAAGAAGTGTCACCTTGTTGTGTTAAA...GCACCTACTATATAACAGCTTCTGTCCTGGGCTGTTTCTCCGGTGTGATTTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533854.6
ENST00000673855.1
CDS-3UTR GCA 90 bp TCTGAGTTGAGTTTGTACATGTTAACGTTTGGTAAAAGTCTCCTGATTGAGGAGGTTGAAGTAGGTCTCTaGATCCTTGGTCCTGTTGAG +
Preference number: 4 (lower is better)
Translates to: SELSLYMLTFGKSLLIEEVEVGL*ILGPVE
Trigger: CTCAACAGGACCAAGGATGCAGAGACCTACTTCAAC...CTCCTCAATCAGGAGACTTTTACCAAACGTTAACATGTACAAACTCAACTCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR GCA 90 bp ATGTCTGAGTCCACAATCAACTTGTATTTAGGAGTGGATTCTACTTTTTCCAGGAACATTAAGGAGGGGTaGCCCCTACATGTGATTCTC +
Preference number: 4 (lower is better)
Translates to: MSESTINLYLGVDSTFSRNIKEG*PLHVIL
Trigger: GAGAATCACATGTAGGGGGCACCCCTCCTTAATGTT...CCTGGAAAAAGTAGAATCCACTCCTAAATACAAGTTGATTGTGGACTCAGACAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR GCA 90 bp TTATTCCAAGTCTGCCTTTGTTTGCACTCAAGCTGCACCAGGTGTCCTCAAATCTATGGATTGAATAGCTaGTACTCACCTTATGTGGTT +
Preference number: 4 (lower is better)
Translates to: LFQVCLCLHSSCTRCPQIYGLNS*YSPYVV
Trigger: AACCACATAAGGTGAGTAGCAGCTATTCAATCCATA...GATTTGAGGACACCTGGTGCAGCTTGAGTGCAAACAAAGGCAGACTTGGAATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR TCA 90 bp CATCAACTCAGGAATTTACGCTTCCAGTGCTTCAGGAAACATTGTGAACAAATGTCCAAGCACAAAAACTaGTTCCTTTACTTTGCGGTG +
Preference number: 4 (lower is better)
Translates to: HQLRNLRFQCFRKHCEQMSKHKN*FLYFAV
Trigger: CACCGCAAAGTAAAGGAATCAGTTTTTGTGCTTGGA...CATTTGTTCACAATGTTTCCTGAAGCACTGGAAGCGTAAATTCCTGAGTTGATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR TCA 90 bp TTATTCTTCCTTGGGGTGCTGCAAGTATCTGATCTCTTAGCTAAATTCCACATTGCTGCAACTAGGCCCTaGTTCGGAGATGAATTTATA +
Preference number: 4 (lower is better)
Translates to: LFFLGVLQVSDLLAKFHIAATRP*FGDEFI
Trigger: TATAAATTCATCTCCGAATCAGGGCCTAGTTGCAGC...AATGTGGAATTTAGCTAAGAGATCAGATACTTGCAGCACCCCAAGGAAGAATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR GCA 90 bp TATATATTAAACACATCTGAATGGTTGCTCATGGGGTGGAGGGGGAAGGAAAAACTGATTCCTTTACTTTaGGGTGAGGAGAACATGGTT +
Preference number: 4 (lower is better)
Translates to: YILNTSEWLLMGWRGKEKLIPLL*GEENMV
Trigger: AACCATGTTCTCCTCACCGCAAAGTAAAGGAATCAG...TTTTTCCTTCCCCCTCCACCCCATGAGCAACCATTCAGATGTGTTTAATATATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR CCA 90 bp CATCAACTCAGGAATTTACGCTTCCAGTGCTTCAGGAAACATTGTGAACAAATGCATGTGACTTGGTTTTaGCCAATGAGACATGACATG +
Preference number: 4 (lower is better)
Translates to: HQLRNLRFQCFRKHCEQMHVTWF*PMRHDM
Trigger: CATGTCATGTCTCATTGGCCAAAACCAAGTCACATG...CATTTGTTCACAATGTTTCCTGAAGCACTGGAAGCGTAAATTCCTGAGTTGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR GCA 90 bp ATGTCTGAGTCCACAATCAACTTGTATTTAGGAGTGGATTCTACTTTTTCCAGGGGATTATTCCAAGTCTaGCTTTGTTTGCACTCAAGC +
Preference number: 4 (lower is better)
Translates to: MSESTINLYLGVDSTFSRGLFQV*LCLHSS
Trigger: GCTTGAGTGCAAACAAAGGCAGACTTGGAATAATCC...CCTGGAAAAAGTAGAATCCACTCCTAAATACAAGTTGATTGTGGACTCAGACAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR GCA 90 bp GCTGGGAGGAGTCTACTACTTGAGCTTGGTTGCATTTTGCTTGTAAAACTTACAGAGTCTTTCTCCAGTTaGTTCAATTTATCCAGAACA +
Preference number: 4 (lower is better)
Translates to: AGRSLLLELGCILLVKLTESFSS*FNLSRT
Trigger: TGTTCTGGATAAATTGAAGCAACTGGAGAAAGACTC...TGTAAGTTTTACAAGCAAAATGCAACCAAGCTCAAGTAGTAGACTCCTCCCAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR CCA 90 bp GCTGGGAGGAGTCTACTACTTGAGCTTGGTTGCATTTTGCTTGTAAAACTTACAATTCTACGTACAGGATaGAAAGGGTTACATGAGATA +
Preference number: 4 (lower is better)
Translates to: AGRSLLLELGCILLVKLTILRTG*KGLHEI
Trigger: TATCTCATGTAACCCTTTCCATCCTGTACGTAGAAT...TGTAAGTTTTACAAGCAAAATGCAACCAAGCTCAAGTAGTAGACTCCTCCCAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR TCA 90 bp ATGTCTGAGTCCACAATCAACTTGTATTTAGGAGTGGATTCTACTTTTTCCAGGTATATTAAACACATCTaGATGGTTGCTCATGGGGTG +
Preference number: 4 (lower is better)
Translates to: MSESTINLYLGVDSTFSRYIKHI*MVAHGV
Trigger: CACCCCATGAGCAACCATTCAGATGTGTTTAATATA...CCTGGAAAAAGTAGAATCCACTCCTAAATACAAGTTGATTGTGGACTCAGACAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR GCA 90 bp TTATTCTTCCTTGGGGTGCTGCAAGTATCTGATCTCTTAGCTAAATTCCACATTACAGACCTTGTAGGATaGTCTCCAGAATTGATCATT +
Preference number: 4 (lower is better)
Translates to: LFFLGVLQVSDLLAKFHITDLVG*SPELII
Trigger: AATGATCAATTCTGGAGAGCATCCTACAAGGTCTGT...AATGTGGAATTTAGCTAAGAGATCAGATACTTGCAGCACCCCAAGGAAGAATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR GCA 90 bp ATGTCTGAGTCCACAATCAACTTGTATTTAGGAGTGGATTCTACTTTTTCCAGGGATAAGGACTTTAGATaGATGTTGGTGGTCATGATG +
Preference number: 4 (lower is better)
Translates to: MSESTINLYLGVDSTFSRDKDFR*MLVVMM
Trigger: CATCATGACCACCAACATGCATCTAAAGTCCTTATC...CCTGGAAAAAGTAGAATCCACTCCTAAATACAAGTTGATTGTGGACTCAGACAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR CCA 90 bp TTATTCTTCCTTGGGGTGCTGCAAGTATCTGATCTCTTAGCTAAATTCCACATTTGTATATTAATAAACTaGAGCACATGGCCACCCTGT +
Preference number: 4 (lower is better)
Translates to: LFFLGVLQVSDLLAKFHICILIN*STWPPC
Trigger: ACAGGGTGGCCATGTGCTCCAGTTTATTAATATACA...AATGTGGAATTTAGCTAAGAGATCAGATACTTGCAGCACCCCAAGGAAGAATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR CCA 90 bp TTATTCTTCCTTGGGGTGCTGCAAGTATCTGATCTCTTAGCTAAATTCCACATTGAACGTTGTGATACGTaGTTCCTTTATTGCCTAATC +
Preference number: 4 (lower is better)
Translates to: LFFLGVLQVSDLLAKFHIERCDT*FLYCLI
Trigger: GATTAGGCAATAAAGGAACCACGTATCACAACGTTC...AATGTGGAATTTAGCTAAGAGATCAGATACTTGCAGCACCCCAAGGAAGAATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533854.6
3UTR CAA 72 bp ATTATTCAAAGACCAGTGATGAAGATTGACCTGAACTaGATAGTCAGAGCCCGAGACTATGAGATCATTTCT +
Preference number: 4 (lower is better)
Translates to: IIQRPVMKIDLN*IVRARDYEIIS
Trigger: AGAAATGATCTCATAGTCTCGGGCTCTGACTATCAAGTTCAGGTCAATCTTCATCACTGGTCTTTGAATAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS CCA 90 bp GGAGCGGCCGCGACCCCCGACCCTGGTCCAATGTCCCTCGCCGGCTaGGCGCGCGGGGCGGGAGGTACCGCGCTAGGCTGCCCGGGACGC +
Preference number: 5 (lower is better)
Translates to: GAAATPDPGPMSLAG*ARGAGGTALGCPGR
Trigger: GCGTCCCGGGCAGCCTAGCGCGGTACCTCCCGCCCCGCGCGCCCAGCCGGCGAGGGACATTGGACCAGGGTCGGGGGTCGCGGCCGCTCC
80% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS TCA 90 bp CGCTCCCACCAGCACGGACTGCGCTCTGGGGCTAGGGAGAGTGGGTaGGCAGGTGGCAGTACCCACGGCTCTCGCTGGAGCGGCCGCGAC +
Preference number: 5 (lower is better)
Translates to: RSHQHGLRSGARESG*AGGSTHGSRWSGRD
Trigger: GTCGCGGCCGCTCCAGCGAGAGCCGTGGGTACTGCCACCTGCTCACCCACTCTCCCTAGCCCCAGAGCGCAGTCCGTGCTGGTGGGAGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS GCA 90 bp GACCGTTGCTGTGCAACTAGTCGCCACGCTCCCACCAGCACGGACTaGGCTCTGGGGCTAGGGAGAGTGGGTGAGCAGGTGGCAGTACCC +
Preference number: 5 (lower is better)
Translates to: DRCCATSRHAPTSTD*ALGLGRVGEQVAVP
Trigger: GGGTACTGCCACCTGCTCACCCACTCTCCCTAGCCCCAGAGCGCAGTCCGTGCTGGTGGGAGCGTGGCGACTAGTTGCACAGCAACGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR CAA 90 bp GGGTGGCGGGATGGTGTTTACGAGGACACAGGACAACAGGTGTCAAGAACCCTGGTCTGTGGTAGTTCATaGCGGCAGCCCGGCTGCCTG +
Preference number: 5 (lower is better)
Translates to: GWRDGVYEDTGQQVSRTLVCGSS*RQPGCL
Trigger: CAGGCAGCCGGGCTGCCGCAATGAACTACCACAGAC...CAGGGTTCTTGACACCTGTTGTCCTGTGTCCTCGTAAACACCATCCCGCCACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR CAA 90 bp TACGAGGACACAGGACAACAGGTGTCAAGAACCCTGGCACCTACACCGCTGGACGCCATCCCCTCCCCATaGGATTCCCATGCAACCCTG +
Preference number: 5 (lower is better)
Translates to: YEDTGQQVSRTLAPTPLDAIPSP*DSHATL
Trigger: CAGGGTTGCATGGGAATCCAATGGGGAGGGGATGGC...GTCCAGCGGTGTAGGTGCCAGGGTTCTTGACACCTGTTGTCCTGTGTCCTCGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000533854.6
ENST00000673855.1
CDS-3UTR CAA 90 bp GTGTCCTTGGACACCAGGAGAGGGAATGTGGACACACTGAGGGACACCAGGGACATCTGTGTAAGGAGCTaGGCATCTCAGAGCTGGCCC +
Preference number: 5 (lower is better)
Translates to: VSLDTRRGNVDTLRDTRDICVRS*ASQSWP
Trigger: GGGCCAGCTCTGAGATGCCAAGCTCCTTACACAGAT...GTCCCTGGTGTCCCTCAGTGTGTCCACATTCCCTCTCCTGGTGTCCAAGGACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR CAA 90 bp CTGATGAGAACTCAGGCCTCTGAACCAGCAGGACAGAGAGCCCACGCATGCAAAGAATGGCCAGGCCAGTaGGCAAGTGCACGAGTCCAG +
Preference number: 5 (lower is better)
Translates to: LMRTQASEPAGQRAHACKEWPGQ*ASARVQ
Trigger: CTGGACTCGTGCACTTGCCAACTGGCCTGGCCATTC...TTTGCATGCGTGGGCTCTCTGTCCTGCTGGTTCAGAGGCCTGAGTTCTCATCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR CAA 90 bp AGAACCCTGGCACCTACACCGCTGGACTTTGGATTTCTAGCCTGGCAGCCACTGGTGAATACCAGCTCCTaGGGGAAAGGGCTCAGAGGC +
Preference number: 5 (lower is better)
Translates to: RTLAPTPLDFGFLAWQPLVNTSS*GKGLRG
Trigger: GCCTCTGAGCCCTTTCCCCAAGGAGCTGGTATTCAC...CAGTGGCTGCCAGGCTAGAAATCCAAAGTCCAGCGGTGTAGGTGCCAGGGTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR CAA 90 bp CCATTGGATTCCCATGCAACCCTGGGGAACACTGAATTTCTCACCACCCAGGTGTGCATCCCTGCTTGCTaGGCCCTGACAGTGGGCTGG +
Preference number: 5 (lower is better)
Translates to: PLDSHATLGNTEFLTTQVCIPAC*ALTVGW
Trigger: CCAGCCCACTGTCAGGGCCAAGCAAGCAGGGATGCA...CACCTGGGTGGTGAGAAATTCAGTGTTCCCCAGGGTTGCATGGGAATCCAATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR CAA 90 bp CCATTGGATTCCCATGCAACCCTGGGGAACACTGAATTTCTCACCACCCAGGTGGCTGAGTCATTGGAGTaGTGGGTGGGTGGGAGGGGA +
Preference number: 5 (lower is better)
Translates to: PLDSHATLGNTEFLTTQVAESLE*WVGGRG
Trigger: TCCCCTCCCACCCACCCACAACTCCAATGACTCAGC...CACCTGGGTGGTGAGAAATTCAGTGTTCCCCAGGGTTGCATGGGAATCCAATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR CAA 90 bp CCATTGGATTCCCATGCAACCCTGGGGAACACTGAATTTCTCACCACCCAGGTGCAGGAGGCTGAGTCATaGGAGTTGTGGGTGGGTGGG +
Preference number: 5 (lower is better)
Translates to: PLDSHATLGNTEFLTTQVQEAES*ELWVGG
Trigger: CCCACCCACCCACAACTCCAATGACTCAGCCTCCTG...CACCTGGGTGGTGAGAAATTCAGTGTTCCCCAGGGTTGCATGGGAATCCAATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR CAA 90 bp ATGAGAACTCAGGCCTCTGAACCAGCAGGACAGAGAGCCCACGCATGCAAACCTCATGAGCCCATGAATTaGGCGTCTTGCCCCAGGCAC +
Preference number: 5 (lower is better)
Translates to: MRTQASEPAGQRAHACKPHEPMN*ASCPRH
Trigger: GTGCCTGGGGCAAGACGCCAAATTCATGGGCTCATG...AGGTTTGCATGCGTGGGCTCTCTGTCCTGCTGGTTCAGAGGCCTGAGTTCTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR CAA 90 bp GTGTCCTTGGACACCAGGAGAGGGAATGTGGACACACTGAGGGACACCAGGGACCACTTGAAACAGGACTaGCAGAGCAGAGCAGTGCAA +
Preference number: 5 (lower is better)
Translates to: VSLDTRRGNVDTLRDTRDHLKQD*QSRAVQ
Trigger: TTGCACTGCTCTGCTCTGCAAGTCCTGTTTCAAGTG...GTCCCTGGTGTCCCTCAGTGTGTCCACATTCCCTCTCCTGGTGTCCAAGGACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR CAA 90 bp ATGAGAACTCAGGCCTCTGAACCAGCAGGACAGAGAGCCCACGCATGCAAACCTCTCTTGGGGGTGCACTaGAAACAGGACTTGCAGAGC +
Preference number: 5 (lower is better)
Translates to: MRTQASEPAGQRAHACKPLLGVH*KQDLQS
Trigger: GCTCTGCAAGTCCTGTTTCAAGTGCACCCCCAAGAG...AGGTTTGCATGCGTGGGCTCTCTGTCCTGCTGGTTCAGAGGCCTGAGTTCTCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR CAA 90 bp AGAACCCTGGCACCTACACCGCTGGACTTTGGATTTCTAGCCTGGCAGCCACTGGCATCCTTGGTCCTGTaGAGCATCTCATCGTTGATG +
Preference number: 5 (lower is better)
Translates to: RTLAPTPLDFGFLAWQPLASLVL*SISSLM
Trigger: CATCAACGATGAGATGCTCAACAGGACCAAGGATGC...CAGTGGCTGCCAGGCTAGAAATCCAAAGTCCAGCGGTGTAGGTGCCAGGGTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR CAA 90 bp CCTACACCGCTGGACTTTGGATTTCTAGCCTGGCAGCCACTGCCATCCCCTCCCCTGGAAAAATCTGATTaGCCCACATCTGTCCTACAC +
Preference number: 5 (lower is better)
Translates to: PTPLDFGFLAWQPLPSPPLEKSD*PTSVLH
Trigger: GTGTAGGACAGATGTGGGCAAATCAGATTTTTCCAG...GGGAGGGGATGGCAGTGGCTGCCAGGCTAGAAATCCAAAGTCCAGCGGTGTAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR CAA 90 bp TCCTCCAACTGTCTCCCCACTGCTACTGCCAGCCATGTGCACTCCATTATGCATGTAGGTGCCATGCTCTaGGGGGTGCACTTGAAACAG +
Preference number: 5 (lower is better)
Translates to: SSNCLPTATASHVHSIMHVGAML*GVHLKQ
Trigger: CTGTTTCAAGTGCACCCCCAAGAGCATGGCACCTAC...ATGCATAATGGAGTGCACATGGCTGGCAGTAGCAGTGGGGAGACAGTTGGAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR CAA 90 bp TCCTCCAACTGTCTCCCCACTGCTACTGCCAGCCATGTGCACTCCATTATGCATAACACATCTGAATGGTaGCTCATGGGGTGGAGGGGG +
Preference number: 5 (lower is better)
Translates to: SSNCLPTATASHVHSIMHNTSEW*LMGWRG
Trigger: CCCCCTCCACCCCATGAGCAACCATTCAGATGTGTT...ATGCATAATGGAGTGCACATGGCTGGCAGTAGCAGTGGGGAGACAGTTGGAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR CAA 90 bp AGGGCCTTGGTCCGGAAATATTACCCTTGTAAGGGGACAGTATCCCCAGGACCACAAGTCTGCCTTTGTTaGCACTCAAGCTGCACCAGG +
Preference number: 5 (lower is better)
Translates to: RALVRKYYPCKGTVSPGPQVCLC*HSSCTR
Trigger: CCTGGTGCAGCTTGAGTGCAAACAAAGGCAGACTTG...TGGTCCTGGGGATACTGTCCCCTTACAAGGGTAATATTTCCGGACCAAGGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR CAA 90 bp CCCAACCAGAGACATGCCAGCCCCGAGATAACCTTCCCTCCAACCAGAGAGATGATTCCAAGTCTGCCTTaGTTTGCACTCAAGCTGCAC +
Preference number: 5 (lower is better)
Translates to: PNQRHASPEITFPPTREMIPSLP*FALKLH
Trigger: GTGCAGCTTGAGTGCAAACAAAGGCAGACTTGGAAT...CATCTCTCTGGTTGGAGGGAAGGTTATCTCGGGGCTGGCATGTCTCTGGTTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR CAA 90 bp CAAGGGGGTGACAGATTGAAAGGAGTCCTTGGAGGTCGGGGAGAGCAGTCAACGGGAGGAGTCTACTACTaGAGCTTGGTTGCATTTTGC +
Preference number: 5 (lower is better)
Translates to: QGGDRLKGVLGGRGEQSTGGVYY*SLVAFC
Trigger: GCAAAATGCAACCAAGCTCAAGTAGTAGACTCCTCC...CGTTGACTGCTCTCCCCGACCTCCAAGGACTCCTTTCAATCTGTCACCCCCTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR CAA 90 bp CCCAACCAGAGACATGCCAGCCCCGAGATAACCTTCCCTCCAACCAGAGAGATGTGTTTGGAATCACTGTaGCCATCTTGCTACCCACTC +
Preference number: 5 (lower is better)
Translates to: PNQRHASPEITFPPTREMCLESL*PSCYPL
Trigger: GAGTGGGTAGCAAGATGGCAACAGTGATTCCAAACA...CATCTCTCTGGTTGGAGGGAAGGTTATCTCGGGGCTGGCATGTCTCTGGTTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR CAA 90 bp TGGCGGGATGGTGTTTACGAGGACACAGGACAACAGGTGTCAAGAACCCTGGCAGCTTCTGCCTGTCTCTaGGGACCCTCACTCTTAAAA +
Preference number: 5 (lower is better)
Translates to: WRDGVYEDTGQQVSRTLAASACL*GPSLLK
Trigger: TTTTAAGAGTGAGGGTCCCAAGAGACAGGCAGAAGC...TGCCAGGGTTCTTGACACCTGTTGTCCTGTGTCCTCGTAAACACCATCCCGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR CAA 90 bp TTCTTTGCACCCCACACACCCATCAACTCAGGAATTTACGCTTCCAGTGCTTCATGCTTGCATCCCTGCTaGCTTGGCCCTGACAGTGGG +
Preference number: 5 (lower is better)
Translates to: FFAPHTPINSGIYASSASCLHPC*LGPDSG
Trigger: CCCACTGTCAGGGCCAAGCAAGCAGGGATGCAAGCA...TGAAGCACTGGAAGCGTAAATTCCTGAGTTGATGGGTGTGTGGGGTGCAAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR CAA 90 bp GGGTGGCGGGATGGTGTTTACGAGGACACAGGACAACAGGTGTCAAGAACCCTGTATCTGAATCGACATTaGCAAGAGACTGTGCCTGGG +
Preference number: 5 (lower is better)
Translates to: GWRDGVYEDTGQQVSRTLYLNRH*QETVPG
Trigger: CCCAGGCACAGTCTCTTGCAAATGTCGATTCAGATA...CAGGGTTCTTGACACCTGTTGTCCTGTGTCCTCGTAAACACCATCCCGCCACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR CAA 90 bp GGGTGGCGGGATGGTGTTTACGAGGACACAGGACAACAGGTGTCAAGAACCCTGATCATCTTTAGAACATaGACCGTGGACTCGGATGTC +
Preference number: 5 (lower is better)
Translates to: GWRDGVYEDTGQQVSRTLIIFRT*TVDSDV
Trigger: GACATCCGAGTCCACGGTCAATGTTCTAAAGATGAT...CAGGGTTCTTGACACCTGTTGTCCTGTGTCCTCGTAAACACCATCCCGCCACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533854.6
ENST00000673855.1
CDS-3UTR CAA 90 bp CAGGCAGCCTTCGGAGAGCAGCTGGATTATTCCAAGTCTGCCTTTGTTTGCACTCAGATGGTGCAGATCTaGAATGTGAATGGCCAGGCC +
Preference number: 5 (lower is better)
Translates to: QAAFGEQLDYSKSAFVCTQMVQI*NVNGQA
Trigger: GGCCTGGCCATTCACATTCAAGATCTGCACCATCTG...AGTGCAAACAAAGGCAGACTTGGAATAATCCAGCTGCTCTCCGAAGGCTGCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR CAA 90 bp TGGCGGGATGGTGTTTACGAGGACACAGGACAACAGGTGTCAAGAACCCTGGCAAGAATACAACAGTCATaGCAAGGGTGCCAGTGGAGA +
Preference number: 5 (lower is better)
Translates to: WRDGVYEDTGQQVSRTLARIQQS*QGCQWR
Trigger: TCTCCACTGGCACCCTTGCAATGACTGTTGTATTCT...TGCCAGGGTTCTTGACACCTGTTGTCCTGTGTCCTCGTAAACACCATCCCGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR CAA 90 bp CTGATGAGAACTCAGGCCTCTGAACCAGCAGGACAGAGAGCCCACGCATGCAAAGCCATCAGATTTTGGTaGTACTCACCAAGTCTCCAC +
Preference number: 5 (lower is better)
Translates to: LMRTQASEPAGQRAHACKAIRFW*YSPSLH
Trigger: GTGGAGACTTGGTGAGTACAACCAAAATCTGATGGC...TTTGCATGCGTGGGCTCTCTGTCCTGCTGGTTCAGAGGCCTGAGTTCTCATCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR CAA 90 bp CAGGCAGCCTTCGGAGAGCAGCTGGATTATTCCAAGTCTGCCTTTGTTTGCACTGGAGAAAGTCAAGACTaGGAGAGCTGCCAATTGGCC +
Preference number: 5 (lower is better)
Translates to: QAAFGEQLDYSKSAFVCTGESQD*ESCQLA
Trigger: GGCCAATTGGCAGCTCTCCAAGTCTTGACTTTCTCC...AGTGCAAACAAAGGCAGACTTGGAATAATCCAGCTGCTCTCCGAAGGCTGCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR CAA 90 bp CAGATGACCCCTAACCACACACGCCAAACATGTTCCATGGCCAAACTTGTGTCAAACACATCTGAATGGTaGCTCATGGGGTGGAGGGGG +
Preference number: 5 (lower is better)
Translates to: QMTPNHTRQTCSMAKLVSNTSEW*LMGWRG
Trigger: CCCCCTCCACCCCATGAGCAACCATTCAGATGTGTT...TGACACAAGTTTGGCCATGGAACATGTTTGGCGTGTGTGGTTAGGGGTCATCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000533854.6
ENST00000673855.1
CDS CCA 90 bp GAGCGGATCATCTTTAGAACATTGACCGTGGACTCGGATGTCAGCTaGGTGTTCATGGGCATCACATATTCTATGGTGAAGCAACGCCCC +
Preference number: 5 (lower is better)
Translates to: ERIIFRTLTVDSDVS*VFMGITYSMVKQRP
Trigger: GGGGCGTTGCTTCACCATAGAATATGTGATGCCCATGAACACCCAGCTGACATCCGAGTCCACGGTCAATGTTCTAAAGATGATCCGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307139.4
ENST00000533854.6
ENST00000673855.1
CDS-3UTR CAA 90 bp TTCTTTGCACCCCACACACCCATCAACTCAGGAATTTACGCTTCCAGTGCTTCATCCCAGACAATCAGCTaGCCCACAGACTCCAGACTC +
Preference number: 5 (lower is better)
Translates to: FFAPHTPINSGIYASSASSQTIS*PTDSRL
Trigger: GAGTCTGGAGTCTGTGGGCAAGCTGATTGTCTGGGA...TGAAGCACTGGAAGCGTAAATTCCTGAGTTGATGGGTGTGTGGGGTGCAAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR CAA 90 bp GTGTCCTTGGACACCAGGAGAGGGAATGTGGACACACTGAGGGACACCAGGGACGAGTCCACAATCAACTaGTATTTAGGAGTGGATTCT +
Preference number: 5 (lower is better)
Translates to: VSLDTRRGNVDTLRDTRDESTIN*YLGVDS
Trigger: AGAATCCACTCCTAAATACAAGTTGATTGTGGACTC...GTCCCTGGTGTCCCTCAGTGTGTCCACATTCCCTCTCCTGGTGTCCAAGGACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR CAA 90 bp AGAACCCTGGCACCTACACCGCTGGACTTTGGATTTCTAGCCTGGCAGCCACTGAAATCTTATTCTTCCTaGGGGTGCTGCAAGTATCTG +
Preference number: 5 (lower is better)
Translates to: RTLAPTPLDFGFLAWQPLKSYSS*GCCKYL
Trigger: CAGATACTTGCAGCACCCCAAGGAAGAATAAGATTT...CAGTGGCTGCCAGGCTAGAAATCCAAAGTCCAGCGGTGTAGGTGCCAGGGTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR CAA 90 bp CACCTGTGCACCTACTCCCTAGGCAGAGTGCTGTGTTCCAAAGGCAGGTTAACTTTTCTTGCATTTTGTTaGGGATGCCACCACTCCCCA +
Preference number: 5 (lower is better)
Translates to: HLCTYSLGRVLCSKGRLTFLAFC*GCHHSP
Trigger: TGGGGAGTGGTGGCATCCCAAACAAAATGCAAGAAA...AGTTAACCTGCCTTTGGAACACAGCACTCTGCCTAGGGAGTAGGTGCACAGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR CAA 90 bp ATGAGAACTCAGGCCTCTGAACCAGCAGGACAGAGAGCCCACGCATGCAAACCTTTCTCCCTCCTTTTCTaGCATTTTGTTTGGGATGCC +
Preference number: 5 (lower is better)
Translates to: MRTQASEPAGQRAHACKPFSLLF*HFVWDA
Trigger: GGCATCCCAAACAAAATGCAAGAAAAGGAGGGAGAA...AGGTTTGCATGCGTGGGCTCTCTGTCCTGCTGGTTCAGAGGCCTGAGTTCTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR CAA 90 bp GAGACTGTGCCTGGGTTGAAGATGGTGAATCCATTCTTGGGTGAATCCCAAGCCCGGATGTGTCCGATGTaGTTCAGGATAAACCCAATG +
Preference number: 5 (lower is better)
Translates to: ETVPGLKMVNPFLGESQARMCPM*FRINPM
Trigger: CATTGGGTTTATCCTGAACAACATCGGACACATCCG...GGCTTGGGATTCACCCAAGAATGGATTCACCATCTTCAACCCAGGCACAGTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR CAA 90 bp CAACAGAGAGCCTCCCACAGGAGGCTGAGTCATTGGAGTTGTGGGTGGGTGGGAGAGGAGAACATGGTTTaGGTATTATTCTGTAAACAG +
Preference number: 5 (lower is better)
Translates to: QQRASHRRLSHWSCGWVGEENMV*VLFCKQ
Trigger: CTGTTTACAGAATAATACCAAAACCATGTTCTCCTC...TCCCACCCACCCACAACTCCAATGACTCAGCCTCCTGTGGGAGGCTCTCTGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR CAA 90 bp GCAGAGCAGAGCAGTGCAAATATTACCAGCTGTGCGGTCATGAGCAAGTCCCTATTACAGCCTCTAGAGTaGGGTATAGAGTCTGGGGAT +
Preference number: 5 (lower is better)
Translates to: AEQSSANITSCAVMSKSLLQPLE*GIESGD
Trigger: ATCCCCAGACTCTATACCCAACTCTAGAGGCTGTAA...TAGGGACTTGCTCATGACCGCACAGCTGGTAATATTTGCACTGCTCTGCTCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR CAA 90 bp GGTGGCGGGATGGTGTTTACGAGGACACAGGACAACAGGTGTCAAGAACCCTGGAAACCTCTAAAGCCTTaGAGCCTTGTTCTTTTTCAC +
Preference number: 5 (lower is better)
Translates to: GGGMVFTRTQDNRCQEPWKPLKP*SLVLFH
Trigger: GTGAAAAAGAACAAGGCTCAAAGGCTTTAGAGGTTT...CCAGGGTTCTTGACACCTGTTGTCCTGTGTCCTCGTAAACACCATCCCGCCACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR CAA 90 bp GAGACTGTGCCTGGGTTGAAGATGGTGAATCCATTCTTGGGTGAATCCCAAGCCATCATCTTTAGAACATaGACCGTGGACTCGGATGTC +
Preference number: 5 (lower is better)
Translates to: ETVPGLKMVNPFLGESQAIIFRT*TVDSDV
Trigger: GACATCCGAGTCCACGGTCAATGTTCTAAAGATGAT...GGCTTGGGATTCACCCAAGAATGGATTCACCATCTTCAACCCAGGCACAGTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR CAA 90 bp CATCAACTCAGGAATTTACGCTTCCAGTGCTTCAGGAAACATTGTGAACAAATGGCCATCCCCTCCCCATaGGATTCCCATGCAACCCTG +
Preference number: 5 (lower is better)
Translates to: HQLRNLRFQCFRKHCEQMAIPSP*DSHATL
Trigger: CAGGGTTGCATGGGAATCCAATGGGGAGGGGATGGC...CATTTGTTCACAATGTTTCCTGAAGCACTGGAAGCGTAAATTCCTGAGTTGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000533854.6
ENST00000673855.1
CDS-3UTR CAA 90 bp GGGGTGCACTTGAAACAGGACTTGCAGAGCAGAGCAGTGCAAATATTACCAGCTCAGCGACACACAGCATaGCTTTGCTACTCAAAATCT +
Preference number: 5 (lower is better)
Translates to: GVHLKQDLQSRAVQILPAQRHTA*LCYSKS
Trigger: AGATTTTGAGTAGCAAAGCAATGCTGTGTGTCGCTG...AGCTGGTAATATTTGCACTGCTCTGCTCTGCAAGTCCTGTTTCAAGTGCACCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR CAA 90 bp TATGAGGAAGACCAGGCCTTAAGAAGAGACCGTGTGCAAAGATGTTCTAGTGACCAGGAGACTGCAAGTTaGGACTTGAACTGCAAGTCC +
Preference number: 5 (lower is better)
Translates to: YEEDQALRRDRVQRCSSDQETAS*DLNCKS
Trigger: GGACTTGCAGTTCAAGTCCAAACTTGCAGTCTCCTG...GTCACTAGAACATCTTTGCACACGGTCTCTTCTTAAGGCCTGGTCTTCCTCATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR CAA 90 bp AGGGCCTTGGTCCGGAAATATTACCCTTGTAAGGGGACAGTATCCCCAGGACCAGTGCTGCCCAAATATTaGGCCAAACATTTTTCTAAC +
Preference number: 5 (lower is better)
Translates to: RALVRKYYPCKGTVSPGPVLPKY*AKHFSN
Trigger: GTTAGAAAAATGTTTGGCCAAATATTTGGGCAGCAC...TGGTCCTGGGGATACTGTCCCCTTACAAGGGTAATATTTCCGGACCAAGGCCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR CAA 90 bp AGAGTGCTCCTGACTGAAATCGTCCAGAAGCCCCTCTCAGGTTTATTCTCCAAAGAGCATATCATGGCCTaGACATTGCCTGGAAGCTTT +
Preference number: 5 (lower is better)
Translates to: RVLLTEIVQKPLSGLFSKEHIMA*TLPGSF
Trigger: AAAGCTTCCAGGCAATGTCAAGGCCATGATATGCTC...TTTGGAGAATAAACCTGAGAGGGGCTTCTGGACGATTTCAGTCAGGAGCACTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR CAA 90 bp TTCTTTGCACCCCACACACCCATCAACTCAGGAATTTACGCTTCCAGTGCTTCAAAGATTGACCTGAACTaGATAGTCAGAGCCCGAGAC +
Preference number: 5 (lower is better)
Translates to: FFAPHTPINSGIYASSASKIDLN*IVRARD
Trigger: GTCTCGGGCTCTGACTATCAAGTTCAGGTCAATCTT...TGAAGCACTGGAAGCGTAAATTCCTGAGTTGATGGGTGTGTGGGGTGCAAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR CAA 90 bp AGAGTGCTCCTGACTGAAATCGTCCAGAAGCCCCTCTCAGGTTTATTCTCCAAAATGGTGAATCCATTCTaGGGTGAATCCCAAGCCTGT +
Preference number: 5 (lower is better)
Translates to: RVLLTEIVQKPLSGLFSKMVNPF*GESQAC
Trigger: ACAGGCTTGGGATTCACCCAAGAATGGATTCACCAT...TTTGGAGAATAAACCTGAGAGGGGCTTCTGGACGATTTCAGTCAGGAGCACTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR CAA 90 bp TATATATTAAACACATCTGAATGGTTGCTCATGGGGTGGAGGGGGAAGGAAAAAGAGTGCAGGGACATCTaGATCTCGGTGCTCTGGTTC +
Preference number: 5 (lower is better)
Translates to: YILNTSEWLLMGWRGKEKECRDI*ISVLWF
Trigger: GAACCAGAGCACCGAGATCAAGATGTCCCTGCACTC...TTTTTCCTTCCCCCTCCACCCCATGAGCAACCATTCAGATGTGTTTAATATATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000533854.6
ENST00000673855.1
CDS-3UTR CAA 90 bp ATGAAATCACACCGGAGAAACAGCCCAGGACAGAAGCTGTTATATAGTAGGTGCCGGATGTGTCCGATGTaGTTCAGGATAAACCCAATG +
Preference number: 5 (lower is better)
Translates to: MKSHRRNSPGQKLLYSRCRMCPM*FRINPM
Trigger: CATTGGGTTTATCCTGAACAACATCGGACACATCCG...GCACCTACTATATAACAGCTTCTGTCCTGGGCTGTTTCTCCGGTGTGATTTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533854.6
ENST00000673855.1
CDS-3UTR CAA 90 bp ATGAAATCACACCGGAGAAACAGCCCAGGACAGAAGCTGTTATATAGTAGGTGCTTCCATCTTAGGGCCTaGGTCCGGAAATATTACCCT +
Preference number: 5 (lower is better)
Translates to: MKSHRRNSPGQKLLYSRCFHLRA*VRKYYP
Trigger: AGGGTAATATTTCCGGACCAAGGCCCTAAGATGGAA...GCACCTACTATATAACAGCTTCTGTCCTGGGCTGTTTCTCCGGTGTGATTTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR CAA 90 bp TATATATTAAACACATCTGAATGGTTGCTCATGGGGTGGAGGGGGAAGGAAAAAAGGCAGGAGAATTGCTaGAGCCCAGGAAGCAGAGGT +
Preference number: 5 (lower is better)
Translates to: YILNTSEWLLMGWRGKEKRQENC*SPGSRG
Trigger: ACCTCTGCTTCCTGGGCTCAAGCAATTCTCCTGCCT...TTTTTCCTTCCCCCTCCACCCCATGAGCAACCATTCAGATGTGTTTAATATATA
47% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR CAA 90 bp TTCTTTGCACCCCACACACCCATCAACTCAGGAATTTACGCTTCCAGTGCTTCAGACTTTAGATGCATGTaGGTGGTCATGATGTTGGTG +
Preference number: 5 (lower is better)
Translates to: FFAPHTPINSGIYASSASDFRCM*VVMMLV
Trigger: CACCAACATCATGACCACCAACATGCATCTAAAGTC...TGAAGCACTGGAAGCGTAAATTCCTGAGTTGATGGGTGTGTGGGGTGCAAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR CAA 90 bp TTATTCTTCCTTGGGGTGCTGCAAGTATCTGATCTCTTAGCTAAATTCCACATTCATGAATTTGGCGTCTaGCCCCAGGCACAGCCTTGT +
Preference number: 5 (lower is better)
Translates to: LFFLGVLQVSDLLAKFHIHEFGV*PQAQPC
Trigger: ACAAGGCTGTGCCTGGGGCAAGACGCCAAATTCATG...AATGTGGAATTTAGCTAAGAGATCAGATACTTGCAGCACCCCAAGGAAGAATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR CAA 90 bp GCTGGGAGGAGTCTACTACTTGAGCTTGGTTGCATTTTGCTTGTAAAACTTACAAGGAACACTGACAGCTaGACATGTCTAAGTCAGCCA +
Preference number: 5 (lower is better)
Translates to: AGRSLLLELGCILLVKLTRNTDS*TCLSQP
Trigger: TGGCTGACTTAGACATGTCAAGCTGTCAGTGTTCCT...TGTAAGTTTTACAAGCAAAATGCAACCAAGCTCAAGTAGTAGACTCCTCCCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR CAA 90 bp AATAGGGGCTCAGACAGACTTAATTTAACACAACAAGGTGACACTTCTTGCATCTTGGAGAGCTGCCAATaGGCCCTCATACCCAAAATC +
Preference number: 5 (lower is better)
Translates to: NRGSDRLNLTQQGDTSCILESCQ*ALIPKI
Trigger: GATTTTGGGTATGAGGGCCAATTGGCAGCTCTCCAA...GATGCAAGAAGTGTCACCTTGTTGTGTTAAATTAAGTCTGTCTGAGCCCCTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR CAA 90 bp TTATTCCAAGTCTGCCTTTGTTTGCACTCAAGCTGCACCAGGTGTCCTCAAATCTTCCCCCATTTATCTTaGGATGGGAACCTGGATTAT +
Preference number: 5 (lower is better)
Translates to: LFQVCLCLHSSCTRCPQIFPHLS*DGNLDY
Trigger: ATAATCCAGGTTCCCATCCAAAGATAAATGGGGGAA...GATTTGAGGACACCTGGTGCAGCTTGAGTGCAAACAAAGGCAGACTTGGAATAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR CAA 90 bp TATATATTAAACACATCTGAATGGTTGCTCATGGGGTGGAGGGGGAAGGAAAAAACATTCTTTGGAGTGTaGTCATCTGGGTGCCTCCAT +
Preference number: 5 (lower is better)
Translates to: YILNTSEWLLMGWRGKEKTFFGV*SSGCLH
Trigger: ATGGAGGCACCCAGATGACAACACTCCAAAGAATGT...TTTTTCCTTCCCCCTCCACCCCATGAGCAACCATTCAGATGTGTTTAATATATA
43% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR CAA 90 bp TTATTCTTCCTTGGGGTGCTGCAAGTATCTGATCTCTTAGCTAAATTCCACATTGAATGGGCATGTGACTaGGTTTTGGCCAATGAGACA +
Preference number: 5 (lower is better)
Translates to: LFFLGVLQVSDLLAKFHIEWACD*VLANET
Trigger: TGTCTCATTGGCCAAAACCAAGTCACATGCCCATTC...AATGTGGAATTTAGCTAAGAGATCAGATACTTGCAGCACCCCAAGGAAGAATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR CAA 90 bp GCTGGGAGGAGTCTACTACTTGAGCTTGGTTGCATTTTGCTTGTAAAACTTACAGAGAAATGCTATGGATaGAATAGCTGCTACTCACCT +
Preference number: 5 (lower is better)
Translates to: AGRSLLLELGCILLVKLTEKCYG*NSCYSP
Trigger: AGGTGAGTAGCAGCTATTCAATCCATAGCATTTCTC...TGTAAGTTTTACAAGCAAAATGCAACCAAGCTCAAGTAGTAGACTCCTCCCAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS-3UTR CAA 90 bp TTATTCTTCCTTGGGGTGCTGCAAGTATCTGATCTCTTAGCTAAATTCCACATTTACGTGGTTCCTTTATaGCCTAATCAGAAACCTCTA +
Preference number: 5 (lower is better)
Translates to: LFFLGVLQVSDLLAKFHIYVVPL*PNQKPL
Trigger: TAGAGGTTTCTGATTAGGCAATAAAGGAACCACGTA...AATGTGGAATTTAGCTAAGAGATCAGATACTTGCAGCACCCCAAGGAAGAATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS CCA 72 bp CACGGCTCTCGCTGGAGCGGCCGCGACCCCCGACCCTaGTCCAATGTCCCTCGCCGGCTGGGCGCGCGGGGC +
Preference number: 6 (lower is better)
Translates to: HGSRWSGRDPRP*SNVPRRLGARG
Trigger: GCCCCGCGCGCCCAGCCGGCGAGGGACATTGGACCAGGGTCGGGGGTCGCGGCCGCTCCAGCGAGAGCCGTG
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS CCA 72 bp GCGACCCCCGACCCTGGTCCAATGTCCCTCGCCGGCTaGGCGCGCGGGGCGGGAGGTACCGCGCTAGGCTGC +
Preference number: 6 (lower is better)
Translates to: ATPDPGPMSLAG*ARGAGGTALGC
Trigger: GCAGCCTAGCGCGGTACCTCCCGCCCCGCGCGCCCAGCCGGCGAGGGACATTGGACCAGGGTCGGGGGTCGC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS CCA 72 bp ACAGGAAGGGTTGTCTGGCCACCCACAGTCCAGGGATaGGGGCGGCCGAGGCTCAGCAGGGTGAAGAGGACA +
Preference number: 6 (lower is better)
Translates to: TGRVVWPPTVQG*GRPRLSRVKRT
Trigger: TGTCCTCTTCACCCTGCTGAGCCTCGGCCGCCCCCATCCCTGGACTGTGGGTGGCCAGACAACCCTTCCTGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533854.6
CDS GCA 72 bp GCCTTCCTCCCGCAGGCACTCATCTTCCTGGACCGTTaGTGTGCAACTAGTCGCCACGCTCCCACCAGCACG +
Preference number: 6 (lower is better)
Translates to: AFLPQALIFLDR*CATSRHAPTST
Trigger: CGTGCTGGTGGGAGCGTGGCGACTAGTTGCACAGCAACGGTCCAGGAAGATGAGTGCCTGCGGGAGGAAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307139.4
ENST00000533854.6
ENST00000673855.1
CDS CCA 72 bp GGGTCAGGGCCTTCCTCCCGCAGGCACTCATCTTCCTaGACCGTTGCTGTGCAACTAGTCGCCACGCTCCCA +
Preference number: 6 (lower is better)
Translates to: GSGPSSRRHSSS*TVAVQLVATLP
Trigger: TGGGAGCGTGGCGACTAGTTGCACAGCAACGGTCCAGGAAGATGAGTGCCTGCGGGAGGAAGGCCCTGACCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307139.4
ENST00000533854.6
ENST00000673855.1
CDS CCA 72 bp AGGCCTGAGTGCAGGGACATCTTGATCTCGGTGCTCTaGTTCTGGGGCACAATCACACCCTCCTCCAGGTAC +
Preference number: 6 (lower is better)
Translates to: RPECRDILISVL*FWGTITPSSRY
Trigger: GTACCTGGAGGAGGGTGTGATTGTGCCCCAGAACCAGAGCACCGAGATCAAGATGTCCCTGCACTCAGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307139.4
ENST00000533854.6
ENST00000673855.1
CDS TCA 72 bp TCAGCTGGGTGTTCATGGGCATCACATATTCTATGGTaGAGCAACGCCCCCGCTCCTCACCTGCAAGGAAGC +
Preference number: 6 (lower is better)
Translates to: SAGCSWASHILW*SNAPAPHLQGS
Trigger: GCTTCCTTGCAGGTGAGGAGCGGGGGCGTTGCTTCACCATAGAATATGTGATGCCCATGAACACCCAGCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307139.4
ENST00000533854.6
ENST00000673855.1
CDS TCA 72 bp AGGGTGAAGAGGACATCTGATCATAGTCGGGGCACTTaGGCAAGGCGGGGTAGTTGCTGTTCATCTGCAGGG +
Preference number: 6 (lower is better)
Translates to: RVKRTSDHSRGT*ARRGSCCSSAG
Trigger: CCCTGCAGATGAACAGCAACTACCCCGCCTTGCTCAAGTGCCCCGACTATGATCAGATGTCCTCTTCACCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307139.4
ENST00000533854.6
CDS TCA 72 bp TCCAGAACAAGAGTGTGGCGAGGTTCCACCACGGGCTaGCCACAGTTAGGAAAATCCAGAGTTTTCCTGAGA +
Preference number: 6 (lower is better)
Translates to: SRTRVWRGSTTG*PQLGKSRVFLR
Trigger: TCTCAGGAAAACTCTGGATTTTCCTAACTGTGGTCAGCCCGTGGTGGAACCTCGCCACACTCTTGTTCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673855.1
CDS GCA 72 bp AAACGACCACCCATACTTGTAGTTGAAGTAGGTCTCTaGATCCTTGGTCCTGTTGAGCATCTCATCGTTGAT +
Preference number: 6 (lower is better)
Translates to: KRPPILVVEVGL*ILGPVEHLIVD
Trigger: ATCAACGATGAGATGCTCAACAGGACCAAGGATGCAGAGACCTACTTCAACTACAAGTATGGGTGGTCGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307139.4
ENST00000533854.6
CDS CCA 72 bp ATCTTTAGAACATTGACCGTGGACTCGGATGTCAGCTaGGTGTTCATGGGCATCACATATTCTATGGTGAAG +
Preference number: 6 (lower is better)
Translates to: IFRTLTVDSDVS*VFMGITYSMVK
Trigger: CTTCACCATAGAATATGTGATGCCCATGAACACCCAGCTGACATCCGAGTCCACGGTCAATGTTCTAAAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307139.4
ENST00000533854.6
ENST00000673855.1