RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CACNG2 (Homo sapiens)

Ensembl gene IDs: ENSG00000166862

Ensembl transcript IDs: ENST00000300105.7, ENST00000480002.1

Found 352 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCTCCAGGCACCCTAACGGAGAGGAGGGACAAGGGCTCGGTCACCTaGAGGCCTACGATTGCCCCATCAATGCTGGGCGGAGCCGGCTCG +
Preference number: 1 (lower is better)
Translates to: PPGTLTERRDKGSVT*RPTIAPSMLGGAGS
Trigger: CGAGCCGGCTCCGCCCAGCATTGATGGGGCAATCGTAGGCCTCCAGGTGACCGAGCCCTTGTCCCTCCTCTCCGTTAGGGTGCCTGGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300105.7
3UTR GCA 90 bp GGGACAAGGGCTCGGTCACCTGGAGGCCTACGATTGCCCCATCAATaGTGGGCGGAGCCGGCTCGAGCTCTGAGCCTTCCTGGAGTTCCT +
Preference number: 1 (lower is better)
Translates to: GTRARSPGGLRLPHQ*WAEPARALSLPGVP
Trigger: AGGAACTCCAGGAAGGCTCAGAGCTCGAGCCGGCTCCGCCCAGCATTGATGGGGCAATCGTAGGCCTCCAGGTGACCGAGCCCTTGTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300105.7
3UTR CCA 90 bp ACAAGGGCTCGGTCACCTGGAGGCCTACGATTGCCCCATCAATGCTaGGCGGAGCCGGCTCGAGCTCTGAGCCTTCCTGGAGTTCCTGGG +
Preference number: 1 (lower is better)
Translates to: TRARSPGGLRLPHQC*AEPARALSLPGVPG
Trigger: CCCAGGAACTCCAGGAAGGCTCAGAGCTCGAGCCGGCTCCGCCCAGCATTGATGGGGCAATCGTAGGCCTCCAGGTGACCGAGCCCTTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300105.7
3UTR GCA 90 bp CCACACCCCAGTGGCTTTCTTCAAGCACACCCAGAACCCAGGCCTTaGGCCATGGAAAGAAGCACTGATCGCCTTCCCAGACGCTCTGCC +
Preference number: 1 (lower is better)
Translates to: PHPSGFLQAHPEPRP*AMERSTDRLPRRSA
Trigger: GGCAGAGCGTCTGGGAAGGCGATCAGTGCTTCTTTCCATGGCGCAAGGCCTGGGTTCTGGGTGTGCTTGAAGAAAGCCACTGGGGTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300105.7
3UTR CCA 90 bp TCTGAGGAAGCCACCTTTCCATCACAGAGACCCCCTGCAGCTCACTaGGACCTTCCGCTACTCCCTCCAACCTTCAAGCCCAGCTCTCAC +
Preference number: 1 (lower is better)
Translates to: SEEATFPSQRPPAAH*DLPLLPPTFKPSSH
Trigger: GTGAGAGCTGGGCTTGAAGGTTGGAGGGAGTAGCGGAAGGTCCCAGTGAGCTGCAGGGGGTCTCTGTGATGGAAAGGTGGCTTCCTCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300105.7
3UTR CCA 90 bp TTCTTGAACTGGTCTGAGCTGGACATGAGCAATCATCCACACCCCTaGGCAGCAACGCCCTTGCAGTTCCGGTCCTGGCTCCTTCCCTCC +
Preference number: 1 (lower is better)
Translates to: FLNWSELDMSNHPHP*AATPLQFRSWLLPS
Trigger: GGAGGGAAGGAGCCAGGACCGGAACTGCAAGGGCGTTGCTGCCCAGGGGTGTGGATGATTGCTCATGTCCAGCTCAGACCAGTTCAAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300105.7
3UTR TCA 90 bp TCAAGCACACCCAGAACCCAGGCCTTGCGCCATGGAAAGAAGCACTaGTCGCCTTCCCAGACGCTCTGCCAGAATTCGGAGAACTGGAGC +
Preference number: 1 (lower is better)
Translates to: SSTPRTQALRHGKKH*SPSQTLCQNSENWS
Trigger: GCTCCAGTTCTCCGAATTCTGGCAGAGCGTCTGGGAAGGCGATCAGTGCTTCTTTCCATGGCGCAAGGCCTGGGTTCTGGGTGTGCTTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300105.7
3UTR GCA 90 bp TCCGGAATCCAGTCCTGGATTCTAGACGGGTGCCCTTCCCATGCATaGGAGTGGTGTGTGTGTGTGTGTGGGTATGTGTGCGTGTGTGGG +
Preference number: 1 (lower is better)
Translates to: SGIQSWILDGCPSHA*EWCVCVCGYVCVCG
Trigger: CCCACACACGCACACATACCCACACACACACACACACCACTCGCATGCATGGGAAGGGCACCCGTCTAGAATCCAGGACTGGATTCCGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300105.7
3UTR CCA 90 bp AAGGCCCAGAGAGGCCATGCAGCAAGGAATTCCGGAATCCAGTCCTaGATTCTAGACGGGTGCCCTTCCCATGCATGCGAGTGGTGTGTG +
Preference number: 1 (lower is better)
Translates to: KAQRGHAARNSGIQS*ILDGCPSHACEWCV
Trigger: CACACACCACTCGCATGCATGGGAAGGGCACCCGTCTAGAATCCAGGACTGGATTCCGGAATTCCTTGCTGCATGGCCTCTCTGGGCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300105.7
3UTR CCA 90 bp GAGGGCATGAGTCAATTTCCTTTGAGCCACGCCCCTGGCCGTGTATaGGATGGAAGGGTTGAGACTGAGTGTGTCCCTGTGAGTGACTGC +
Preference number: 1 (lower is better)
Translates to: EGMSQFPLSHAPGRV*DGRVETECVPVSDC
Trigger: GCAGTCACTCACAGGGACACACTCAGTCTCAACCCTTCCATCCCATACACGGCCAGGGGCGTGGCTCAAAGGAAATTGACTCATGCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300105.7
3UTR CCA 90 bp CCAGTGGCTTTCTTCAAGCACACCCAGAACCCAGGCCTTGCGCCATaGAAAGAAGCACTGATCGCCTTCCCAGACGCTCTGCCAGAATTC +
Preference number: 1 (lower is better)
Translates to: PVAFFKHTQNPGLAP*KEALIAFPDALPEF
Trigger: GAATTCTGGCAGAGCGTCTGGGAAGGCGATCAGTGCTTCTTTCCATGGCGCAAGGCCTGGGTTCTGGGTGTGCTTGAAGAAAGCCACTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300105.7
3UTR TCA 90 bp GTTTCTGCCCAGACTGAGGGCAACTTGGTTGTTGTTACCACACCTTaGATTGTCTCCCATTGTTCTGCCCCAGGGCCCATGACCTCCCCC +
Preference number: 1 (lower is better)
Translates to: VSAQTEGNLVVVTTP*IVSHCSAPGPMTSP
Trigger: GGGGGAGGTCATGGGCCCTGGGGCAGAACAATGGGAGACAATTCAAGGTGTGGTAACAACAACCAAGTTGCCCTCAGTCTGGGCAGAAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300105.7
3UTR GCA 90 bp CAACTTGGTTGTTGTTACCACACCTTGAATTGTCTCCCATTGTTCTaGCCCAGGGCCCATGACCTCCCCCTGTACTTCTGGGCTGGGCTG +
Preference number: 1 (lower is better)
Translates to: QLGCCYHTLNCLPLF*PRAHDLPLYFWAGL
Trigger: CAGCCCAGCCCAGAAGTACAGGGGGAGGTCATGGGCCCTGGGGCAGAACAATGGGAGACAATTCAAGGTGTGGTAACAACAACCAAGTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300105.7
3UTR CCA 90 bp ATCCAGTCCTGGATTCTAGACGGGTGCCCTTCCCATGCATGCGAGTaGTGTGTGTGTGTGTGTGGGTATGTGTGCGTGTGTGGGTATGTG +
Preference number: 1 (lower is better)
Translates to: IQSWILDGCPSHACE*CVCVCGYVCVCGYV
Trigger: CACATACCCACACACGCACACATACCCACACACACACACACACCACTCGCATGCATGGGAAGGGCACCCGTCTAGAATCCAGGACTGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300105.7
3UTR TCA 90 bp CTTTGTTGGATTCTGTCTTCCCCCATTCGCAGCACCTTCCTTGTCTaGGGAAGCCACCTTTCCATCACAGAGACCCCCTGCAGCTCACTG +
Preference number: 1 (lower is better)
Translates to: LCWILSSPIRSTFLV*GSHLSITETPCSSL
Trigger: CAGTGAGCTGCAGGGGGTCTCTGTGATGGAAAGGTGGCTTCCTCAGACAAGGAAGGTGCTGCGAATGGGGGAAGACAGAATCCAACAAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000300105.7
3UTR GCA 90 bp CATGCAGCAAGGAATTCCGGAATCCAGTCCTGGATTCTAGACGGGTaGCCTTCCCATGCATGCGAGTGGTGTGTGTGTGTGTGTGGGTAT +
Preference number: 1 (lower is better)
Translates to: HAARNSGIQSWILDG*PSHACEWCVCVCGY
Trigger: ATACCCACACACACACACACACCACTCGCATGCATGGGAAGGGCACCCGTCTAGAATCCAGGACTGGATTCCGGAATTCCTTGCTGCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300105.7
3UTR CCA 90 bp AGACGGGTGCCCTTCCCATGCATGCGAGTGGTGTGTGTGTGTGTGTaGGTATGTGTGCGTGTGTGGGTATGTGTGCATGTGTGTGTTCAT +
Preference number: 1 (lower is better)
Translates to: RRVPFPCMRVVCVCV*VCVRVWVCVHVCVH
Trigger: ATGAACACACACATGCACACATACCCACACACGCACACATACCCACACACACACACACACCACTCGCATGCATGGGAAGGGCACCCGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300105.7
3UTR TCA 90 bp GTGAGTGACTGCAGTGCTGGGCTAAGTGGACTGTGTATGTGTGTGTaGACGTGCCTGTGTGCGTGTGGGGTGTGTGGTCTCTTTCTTTGT +
Preference number: 1 (lower is better)
Translates to: VSDCSAGLSGLCMCV*TCLCACGVCGLFLC
Trigger: ACAAAGAAAGAGACCACACACCCCACACGCACACAGGCACGTTCACACACACATACACAGTCCACTTAGCCCAGCACTGCAGTCACTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300105.7
3UTR TCA 90 bp TTTGCTTTGACATTGGATGTGGGGGCAGGTGTTCGGGGAGCACAGTaGGGAGGTATATGGTGTGTGTGTGTGTGTGTGTCTGAGAGGCTG +
Preference number: 1 (lower is better)
Translates to: FALTLDVGAGVRGAQ*GGIWCVCVCVSERL
Trigger: CAGCCTCTCAGACACACACACACACACACACCATATACCTCCTCACTGTGCTCCCCGAACACCTGCCCCCACATCCAATGTCAAAGCAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300105.7
3UTR CCA 90 bp TGGTGGCAGCTGTCCTGGTCATCCCTGGCATATCCTCGGGGCAGGTaGCAGATCTTAAGTCACAGATACATAGAGCAAGAATGGGCCTTT +
Preference number: 1 (lower is better)
Translates to: WWQLSWSSLAYPRGR*QILSHRYIEQEWAF
Trigger: AAAGGCCCATTCTTGCTCTATGTATCTGTGACTTAAGATCTGCCACCTGCCCCGAGGATATGCCAGGGATGACCAGGACAGCTGCCACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300105.7
3UTR CCA 90 bp ACTGTGTATGTGTGTGTGAACGTGCCTGTGTGCGTGTGGGGTGTGTaGTCTCTTTCTTTGTTGGATTCTGTCTTCCCCCATTCGCAGCAC +
Preference number: 1 (lower is better)
Translates to: TVYVCVNVPVCVWGV*SLSLLDSVFPHSQH
Trigger: GTGCTGCGAATGGGGGAAGACAGAATCCAACAAAGAAAGAGACCACACACCCCACACGCACACAGGCACGTTCACACACACATACACAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300105.7
3UTR CCA 90 bp GCTAGTTTTTCTCTTCAGACAGTGCTCGCTTGGGTGCGGTTTTCTTaGGGACCCTCCCTTCTCCCTTCGCTCTCATCCTTGATCCCTTTA +
Preference number: 1 (lower is better)
Translates to: ASFSLQTVLAWVRFS*GPSLLPSLSSLIPL
Trigger: TAAAGGGATCAAGGATGAGAGCGAAGGGAGAAGGGAGGGTCCCCAAGAAAACCGCACCCAAGCGAGCACTGTCTGAAGAGAAAAACTAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300105.7
3UTR GCA 90 bp TGCTGGGCTAAGTGGACTGTGTATGTGTGTGTGAACGTGCCTGTGTaGGTGTGGGGTGTGTGGTCTCTTTCTTTGTTGGATTCTGTCTTC +
Preference number: 1 (lower is better)
Translates to: CWAKWTVYVCVNVPV*VWGVWSLSLLDSVF
Trigger: GAAGACAGAATCCAACAAAGAAAGAGACCACACACCCCACACGCACACAGGCACGTTCACACACACATACACAGTCCACTTAGCCCAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300105.7
3UTR CCA 90 bp GCTAAGTGGACTGTGTATGTGTGTGTGAACGTGCCTGTGTGCGTGTaGGGTGTGTGGTCTCTTTCTTTGTTGGATTCTGTCTTCCCCCAT +
Preference number: 1 (lower is better)
Translates to: AKWTVYVCVNVPVCV*GVWSLSLLDSVFPH
Trigger: ATGGGGGAAGACAGAATCCAACAAAGAAAGAGACCACACACCCCACACGCACACAGGCACGTTCACACACACATACACAGTCCACTTAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300105.7
3UTR GCA 90 bp TGGTGTGTGTGTGTGTGTGGGTATGTGTGCGTGTGTGGGTATGTGTaGATGTGTGTGTTCATGTGTATGCTCTGTTGGGAGGTTGTGAAT +
Preference number: 1 (lower is better)
Translates to: WCVCVCGYVCVCGYV*MCVFMCMLCWEVVN
Trigger: ATTCACAACCTCCCAACAGAGCATACACATGAACACACACATGCACACATACCCACACACGCACACATACCCACACACACACACACACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300105.7
3UTR CCA 90 bp AAATTTCCAGCTCAGGAAAGCTGTTGGATTTCTGTCAGTCTGAACTaGCCCTTGTCACTCTGGGGAAGAAAGGGGAGAAACACAGGATGC +
Preference number: 1 (lower is better)
Translates to: KFPAQESCWISVSLN*PLSLWGRKGRNTGC
Trigger: GCATCCTGTGTTTCTCCCCTTTCTTCCCCAGAGTGACAAGGGCCAGTTCAGACTGACAGAAATCCAACAGCTTTCCTGAGCTGGAAATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300105.7
3UTR TCA 90 bp ATGTGTGCATGTGTGTGTTCATGTGTATGCTCTGTTGGGAGGTTGTaGATGAACACAAAGGCCAGTGTGGAGTTGTTGTCGTCCATGGCT +
Preference number: 1 (lower is better)
Translates to: MCACVCSCVCSVGRL*MNTKASVELLSSMA
Trigger: AGCCATGGACGACAACAACTCCACACTGGCCTTTGTGTTCATTCACAACCTCCCAACAGAGCATACACATGAACACACACATGCACACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300105.7
3UTR CCA 90 bp GTGTGTGGGTATGTGTGCATGTGTGTGTTCATGTGTATGCTCTGTTaGGAGGTTGTGAATGAACACAAAGGCCAGTGTGGAGTTGTTGTC +
Preference number: 1 (lower is better)
Translates to: VCGYVCMCVFMCMLC*EVVNEHKGQCGVVV
Trigger: GACAACAACTCCACACTGGCCTTTGTGTTCATTCACAACCTCCCAACAGAGCATACACATGAACACACACATGCACACATACCCACACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300105.7
3UTR-3UTR TCA 90 bp GGCATCAGTGAGTCCAAGGACCCCCAAAGGGTCAATGAACCCCCTTCCCAGGGGAGCCGGCTCGAGCTCTaGGCCTTCCTGGAGTTCCTG +
Preference number: 2 (lower is better)
Translates to: GISESKDPQRVNEPPSQGSRLEL*AFLEFL
Trigger: CAGGAACTCCAGGAAGGCTCAGAGCTCGAGCCGGCT...CCCCTGGGAAGGGGGTTCATTGACCCTTTGGGGGTCCTTGGACTCACTGATGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000300105.7
3UTR-3UTR TCA 90 bp CCACCTTTCCATCACAGAGACCCCCTGCAGCTCACTGGGACCTTCCGCTACTCCCCAAGAGGCTCACCCTaGGGATTCCGGGGTTTCCGG +
Preference number: 2 (lower is better)
Translates to: PPFHHRDPLQLTGTFRYSPRGSP*GFRGFR
Trigger: CCGGAAACCCCGGAATCCTCAGGGTGAGCCTCTTGG...GGAGTAGCGGAAGGTCCCAGTGAGCTGCAGGGGGTCTCTGTGATGGAAAGGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000300105.7
3UTR-3UTR TCA 90 bp ACCCCACACCCCAGTGGCTTTCTTCAAGCACACCCAGAACCCAGGCCTTGCGCCAGGAGCTTGGGGACATaGCCCCAAGAGGCTCACCCT +
Preference number: 2 (lower is better)
Translates to: TPHPSGFLQAHPEPRPCARSLGT*PQEAHP
Trigger: AGGGTGAGCCTCTTGGGGTCATGTCCCCAAGCTCCT...GGCGCAAGGCCTGGGTTCTGGGTGTGCTTGAAGAAAGCCACTGGGGTGTGGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000300105.7
3UTR-3UTR TCA 90 bp ACCCCACACCCCAGTGGCTTTCTTCAAGCACACCCAGAACCCAGGCCTTGCGCCGTGTGTCTGAGAGGCTaGCTGATGATGAGCCTGGGG +
Preference number: 2 (lower is better)
Translates to: TPHPSGFLQAHPEPRPCAVCLRG*LMMSLG
Trigger: CCCCAGGCTCATCATCAGTCAGCCTCTCAGACACAC...GGCGCAAGGCCTGGGTTCTGGGTGTGCTTGAAGAAAGCCACTGGGGTGTGGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300105.7
3UTR-3UTR GCA 90 bp GGCCATGCAGCAAGGAATTCCGGAATCCAGTCCTGGATTCTAGACGGGTGCCCTGGACCTGGCAGTGACTaGAGGCTCACCTGGCCCCAG +
Preference number: 2 (lower is better)
Translates to: GHAARNSGIQSWILDGCPGPGSD*RLTWPQ
Trigger: CTGGGGCCAGGTGAGCCTGCAGTCACTGCCAGGTCC...AGGGCACCCGTCTAGAATCCAGGACTGGATTCCGGAATTCCTTGCTGCATGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300105.7
3UTR-3UTR GCA 90 bp GTCACCCCACACCCCAGTGGCTTTCTTCAAGCACACCCAGAACCCAGGCCTTGCCGGGTGCCCTTCCCATaGATGCGAGTGGTGTGTGTG +
Preference number: 2 (lower is better)
Translates to: VTPHPSGFLQAHPEPRPCRVPFP*MRVVCV
Trigger: CACACACACCACTCGCATGCATGGGAAGGGCACCCG...GCAAGGCCTGGGTTCTGGGTGTGCTTGAAGAAAGCCACTGGGGTGTGGGGTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300105.7
3UTR-3UTR CCA 90 bp CCACCTTTCCATCACAGAGACCCCCTGCAGCTCACTGGGACCTTCCGCTACTCCGGAGGCAGGGCCCGCTaGGGGTTAAAGGGAACAGAA +
Preference number: 2 (lower is better)
Translates to: PPFHHRDPLQLTGTFRYSGGRAR*GLKGTE
Trigger: TTCTGTTCCCTTTAACCCCCAGCGGGCCCTGCCTCC...GGAGTAGCGGAAGGTCCCAGTGAGCTGCAGGGGGTCTCTGTGATGGAAAGGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300105.7
3UTR-3UTR TCA 90 bp ACCCCACACCCCAGTGGCTTTCTTCAAGCACACCCAGAACCCAGGCCTTGCGCCAGCACCTTCCTTGTCTaGGGAAGCCACCTTTCCATC +
Preference number: 2 (lower is better)
Translates to: TPHPSGFLQAHPEPRPCASTFLV*GSHLSI
Trigger: GATGGAAAGGTGGCTTCCTCAGACAAGGAAGGTGCT...GGCGCAAGGCCTGGGTTCTGGGTGTGCTTGAAGAAAGCCACTGGGGTGTGGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300105.7
3UTR-3UTR TCA 90 bp GGCCATGCAGCAAGGAATTCCGGAATCCAGTCCTGGATTCTAGACGGGTGCCCTCTGAGTGTGTCCCTGTaGGTGACTGCAGTGCTGGGC +
Preference number: 2 (lower is better)
Translates to: GHAARNSGIQSWILDGCPLSVSL*VTAVLG
Trigger: GCCCAGCACTGCAGTCACTCACAGGGACACACTCAG...AGGGCACCCGTCTAGAATCCAGGACTGGATTCCGGAATTCCTTGCTGCATGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300105.7
3UTR-3UTR GCA 90 bp TTGGTGGCAGCTGTCCTGGTCATCCCTGGCATATCCTCGGGGCAGGTGGCAGATTGGATTCTAGACGGGTaGCCTTCCCATGCATGCGAG +
Preference number: 2 (lower is better)
Translates to: LVAAVLVIPGISSGQVADWILDG*PSHACE
Trigger: CTCGCATGCATGGGAAGGGCACCCGTCTAGAATCCA...ATCTGCCACCTGCCCCGAGGATATGCCAGGGATGACCAGGACAGCTGCCACCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300105.7
3UTR-3UTR GCA 90 bp TTGGTGGCAGCTGTCCTGGTCATCCCTGGCATATCCTCGGGGCAGGTGGCAGATGGCCCAGAGAGGCCATaGAGCAAGGAATTCCGGAAT +
Preference number: 2 (lower is better)
Translates to: LVAAVLVIPGISSGQVADGPERP*SKEFRN
Trigger: ATTCCGGAATTCCTTGCTGCATGGCCTCTCTGGGCC...ATCTGCCACCTGCCCCGAGGATATGCCAGGGATGACCAGGACAGCTGCCACCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300105.7
3UTR-3UTR CCA 90 bp GGCAGGTGTTCGGGGAGCACAGTGAGGAGGTATATGGTGTGTGTGTGTGTGTGTTTGCCCCATCAATGCTaGGCGGAGCCGGCTCGAGCT +
Preference number: 2 (lower is better)
Translates to: GRCSGSTVRRYMVCVCVCLPHQC*AEPARA
Trigger: AGCTCGAGCCGGCTCCGCCCAGCATTGATGGGGCAA...ACACACACACACACACACCATATACCTCCTCACTGTGCTCCCCGAACACCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300105.7
3UTR-3UTR TCA 90 bp TGGGGGCAGGTGTTCGGGGAGCACAGTGAGGAGGTATATGGTGTGTGTGTGTGTTTGCAGTGTCATTGTTaGACCCGCTGGGCCCCAAGG +
Preference number: 2 (lower is better)
Translates to: WGQVFGEHSEEVYGVCVCLQCHC*TRWAPR
Trigger: CCTTGGGGCCCAGCGGGTTCAACAATGACACTGCAA...ACACACACACACACCATATACCTCCTCACTGTGCTCCCCGAACACCTGCCCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000300105.7
3UTR-3UTR CCA 90 bp TTCTTCAAGCACACCCAGAACCCAGGCCTTGCGCCATGGAAAGAAGCACTGATCCCCTTCCCAGGGGACTaGGGGGCTTATGAGTCAGGG +
Preference number: 2 (lower is better)
Translates to: FFKHTQNPGLAPWKEALIPFPGD*GAYESG
Trigger: CCCTGACTCATAAGCCCCCCAGTCCCCTGGGAAGGG...GATCAGTGCTTCTTTCCATGGCGCAAGGCCTGGGTTCTGGGTGTGCTTGAAGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000300105.7
3UTR-3UTR TCA 90 bp TTCTTCAAGCACACCCAGAACCCAGGCCTTGCGCCATGGAAAGAAGCACTGATCCCAAGGGGGCATCAGTaGGTCCAAGGACCCCCAAAG +
Preference number: 2 (lower is better)
Translates to: FFKHTQNPGLAPWKEALIPRGHQ*VQGPPK
Trigger: CTTTGGGGGTCCTTGGACTCACTGATGCCCCCTTGG...GATCAGTGCTTCTTTCCATGGCGCAAGGCCTGGGTTCTGGGTGTGCTTGAAGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000300105.7
3UTR-3UTR TCA 90 bp GTCACCCCACACCCCAGTGGCTTTCTTCAAGCACACCCAGAACCCAGGCCTTGCTTGGGAGGTTGTGAATaGACACAAAGGCCAGTGTGG +
Preference number: 2 (lower is better)
Translates to: VTPHPSGFLQAHPEPRPCLGGCE*TQRPVW
Trigger: CCACACTGGCCTTTGTGTTCATTCACAACCTCCCAA...GCAAGGCCTGGGTTCTGGGTGTGCTTGAAGAAAGCCACTGGGGTGTGGGGTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300105.7
3UTR-3UTR CCA 90 bp GTGTGTGAACGTGCCTGTGTGCGTGTGGGGTGTGTGGTCTCTTTCTTTGTTGGAAAGGGCTCGGTCACCTaGAGGCCTACGATTGCCCCA +
Preference number: 2 (lower is better)
Translates to: VCERACVRVGCVVSFFVGKGSVT*RPTIAP
Trigger: TGGGGCAATCGTAGGCCTCCAGGTGACCGAGCCCTT...TCCAACAAAGAAAGAGACCACACACCCCACACGCACACAGGCACGTTCACACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300105.7
3UTR-3UTR CCA 90 bp GGCAGGTGTTCGGGGAGCACAGTGAGGAGGTATATGGTGTGTGTGTGTGTGTGTTGTCCTGGTCATCCCTaGCATATCCTCGGGGCAGGT +
Preference number: 2 (lower is better)
Translates to: GRCSGSTVRRYMVCVCVCCPGHP*HILGAG
Trigger: ACCTGCCCCGAGGATATGCCAGGGATGACCAGGACA...ACACACACACACACACACCATATACCTCCTCACTGTGCTCCCCGAACACCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300105.7
3UTR-3UTR CCA 90 bp TTCTTCAAGCACACCCAGAACCCAGGCCTTGCGCCATGGAAAGAAGCACTGATCATGAGCCTGGGGGCTTaGTGGCAGCTGTCCTGGTCA +
Preference number: 2 (lower is better)
Translates to: FFKHTQNPGLAPWKEALIMSLGA*WQLSWS
Trigger: TGACCAGGACAGCTGCCACCAAGCCCCCAGGCTCAT...GATCAGTGCTTCTTTCCATGGCGCAAGGCCTGGGTTCTGGGTGTGCTTGAAGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300105.7
3UTR CAA 90 bp GTGCGGTTTTCTTGGGGACCCTCCCTTCTCCCTTCGCTCTCATCCTaGATCCCTTTAGGTCTGGAATCTGGTGGGATGGCGGGCAAGATT +
Preference number: 2 (lower is better)
Translates to: VRFSWGPSLLPSLSS*IPLGLESGGMAGKI
Trigger: AATCTTGCCCGCCATCCCACCAGATTCCAGACCTAAAGGGATCAAGGATGAGAGCGAAGGGAGAAGGGAGGGTCCCCAAGAAAACCGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300105.7
3UTR-3UTR GCA 90 bp TGGTTGTTGTTACCACACCTTGAATTGTCTCCCATTGTTCTGCCCCAGGGCCCACTGGAGGCCTACGATTaGCCCATCAATGCTGGGCGG +
Preference number: 2 (lower is better)
Translates to: WLLLPHLELSPIVLPQGPLEAYD*PINAGR
Trigger: CCGCCCAGCATTGATGGGGCAATCGTAGGCCTCCAG...TGGGCCCTGGGGCAGAACAATGGGAGACAATTCAAGGTGTGGTAACAACAACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300105.7
3UTR-3UTR CCA 90 bp TTCTTCAAGCACACCCAGAACCCAGGCCTTGCGCCATGGAAAGAAGCACTGATCTTTGAGCCACGCCCCTaGCCGTGTATGGGATGGAAG +
Preference number: 2 (lower is better)
Translates to: FFKHTQNPGLAPWKEALIFEPRP*PCMGWK
Trigger: CTTCCATCCCATACACGGCCAGGGGCGTGGCTCAAA...GATCAGTGCTTCTTTCCATGGCGCAAGGCCTGGGTTCTGGGTGTGCTTGAAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300105.7
3UTR CAA 90 bp TGTGTGAACGTGCCTGTGTGCGTGTGGGGTGTGTGGTCTCTTTCTTaGTTGGATTCTGTCTTCCCCCATTCGCAGCACCTTCCTTGTCTG +
Preference number: 2 (lower is better)
Translates to: CVNVPVCVWGVWSLS*LDSVFPHSQHLPCL
Trigger: CAGACAAGGAAGGTGCTGCGAATGGGGGAAGACAGAATCCAACAAAGAAAGAGACCACACACCCCACACGCACACAGGCACGTTCACACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300105.7
3UTR-3UTR TCA 90 bp GTCACCCCACACCCCAGTGGCTTTCTTCAAGCACACCCAGAACCCAGGCCTTGCACTTGCAGACTGTTCTaGAATTTCCAGCTCAGGAAA +
Preference number: 2 (lower is better)
Translates to: VTPHPSGFLQAHPEPRPCTCRLF*NFQLRK
Trigger: TTTCCTGAGCTGGAAATTTCAGAACAGTCTGCAAGT...GCAAGGCCTGGGTTCTGGGTGTGCTTGAAGAAAGCCACTGGGGTGTGGGGTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300105.7
3UTR-3UTR GCA 90 bp GAAATTTCCAGCTCAGGAAAGCTGTTGGATTTCTGTCAGTCTGAACTGGCCCTTCGATTGCCCCATCAATaGTGGGCGGAGCCGGCTCGA +
Preference number: 2 (lower is better)
Translates to: EISSSGKLLDFCQSELALRLPHQ*WAEPAR
Trigger: TCGAGCCGGCTCCGCCCAGCATTGATGGGGCAATCG...AAGGGCCAGTTCAGACTGACAGAAATCCAACAGCTTTCCTGAGCTGGAAATTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300105.7
3UTR-3UTR CCA 90 bp TGGTTGTTGTTACCACACCTTGAATTGTCTCCCATTGTTCTGCCCCAGGGCCCAAGTGAAGAAGGGCTTTaGGGACCCCTGCGTCTTTCC +
Preference number: 2 (lower is better)
Translates to: WLLLPHLELSPIVLPQGPSEEGL*GPLRLS
Trigger: GGAAAGACGCAGGGGTCCCCAAAGCCCTTCTTCACT...TGGGCCCTGGGGCAGAACAATGGGAGACAATTCAAGGTGTGGTAACAACAACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300105.7
3UTR CAA 90 bp TCTTTCTTTGTTGGATTCTGTCTTCCCCCATTCGCAGCACCTTCCTaGTCTGAGGAAGCCACCTTTCCATCACAGAGACCCCCTGCAGCT +
Preference number: 2 (lower is better)
Translates to: SFFVGFCLPPFAAPS*SEEATFPSQRPPAA
Trigger: AGCTGCAGGGGGTCTCTGTGATGGAAAGGTGGCTTCCTCAGACAAGGAAGGTGCTGCGAATGGGGGAAGACAGAATCCAACAAAGAAAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000300105.7
3UTR CAA 90 bp AGGGGTAGAGTTCAGTTTCTGCCCAGACTGAGGGCAACTTGGTTGTaGTTACCACACCTTGAATTGTCTCCCATTGTTCTGCCCCAGGGC +
Preference number: 2 (lower is better)
Translates to: RGRVQFLPRLRATWL*LPHLELSPIVLPQG
Trigger: GCCCTGGGGCAGAACAATGGGAGACAATTCAAGGTGTGGTAACAACAACCAAGTTGCCCTCAGTCTGGGCAGAAACTGAACTCTACCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300105.7
3UTR CAA 90 bp GAGAGGGGTAGAGTTCAGTTTCTGCCCAGACTGAGGGCAACTTGGTaGTTGTTACCACACCTTGAATTGTCTCCCATTGTTCTGCCCCAG +
Preference number: 2 (lower is better)
Translates to: ERGRVQFLPRLRATW*LLPHLELSPIVLPQ
Trigger: CTGGGGCAGAACAATGGGAGACAATTCAAGGTGTGGTAACAACAACCAAGTTGCCCTCAGTCTGGGCAGAAACTGAACTCTACCCCTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300105.7
3UTR-3UTR CCA 90 bp GTCACCCCACACCCCAGTGGCTTTCTTCAAGCACACCCAGAACCCAGGCCTTGCTTGACCTTTAGTCTGTaGTGCAAGTTTAACTTTTGG +
Preference number: 2 (lower is better)
Translates to: VTPHPSGFLQAHPEPRPCLTFSL*CKFNFW
Trigger: CCAAAAGTTAAACTTGCACCACAGACTAAAGGTCAA...GCAAGGCCTGGGTTCTGGGTGTGCTTGAAGAAAGCCACTGGGGTGTGGGGTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000300105.7
3UTR-3UTR GCA 90 bp GGTGCAAGTTTAACTTTTGGGGTTGGTCCTTACACTGGGATGGAACTGCTAAAAATCACAGAGACCCCCTaGAGCTCACTGGGACCTTCC +
Preference number: 2 (lower is better)
Translates to: GASLTFGVGPYTGMELLKITETP*SSLGPS
Trigger: GGAAGGTCCCAGTGAGCTGCAGGGGGTCTCTGTGAT...TTTTAGCAGTTCCATCCCAGTGTAAGGACCAACCCCAAAAGTTAAACTTGCACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000300105.7
3UTR-3UTR CCA 90 bp GAAATTTCCAGCTCAGGAAAGCTGTTGGATTTCTGTCAGTCTGAACTGGCCCTTAGGAGCATTAAGGACTaGGAACCTGGGGCCAGGCAA +
Preference number: 2 (lower is better)
Translates to: EISSSGKLLDFCQSELALRSIKD*EPGARQ
Trigger: TTGCCTGGCCCCAGGTTCCCAGTCCTTAATGCTCCT...AAGGGCCAGTTCAGACTGACAGAAATCCAACAGCTTTCCTGAGCTGGAAATTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300105.7
3UTR-3UTR TCA 90 bp GAAATTTCCAGCTCAGGAAAGCTGTTGGATTTCTGTCAGTCTGAACTGGCCCTTAACACAGGATGCCCTTaGCCTTTAGTCTGTGGTGCA +
Preference number: 2 (lower is better)
Translates to: EISSSGKLLDFCQSELALNTGCP*PLVCGA
Trigger: TGCACCACAGACTAAAGGTCAAGGGCATCCTGTGTT...AAGGGCCAGTTCAGACTGACAGAAATCCAACAGCTTTCCTGAGCTGGAAATTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300105.7
3UTR-3UTR GCA 90 bp CAATTTCCTTTGAGCCACGCCCCTGGCCGTGTATGGGATGGAAGGGTTGAGACTCTCTCACAACGGTTTTaGTTTGTTTTTGTAAATGGA +
Preference number: 2 (lower is better)
Translates to: QFPLSHAPGRVWDGRVETLSQRF*FVFVNG
Trigger: TCCATTTACAAAAACAAAGCAAAACCGTTGTGAGAG...AGTCTCAACCCTTCCATCCCATACACGGCCAGGGGCGTGGCTCAAAGGAAATTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000300105.7
3UTR-3UTR TCA 90 bp GGTGCAAGTTTAACTTTTGGGGTTGGTCCTTACACTGGGATGGAACTGCTAAAATCTGTTGGGAGGTTGTaGATGAACACAAAGGCCAGT +
Preference number: 2 (lower is better)
Translates to: GASLTFGVGPYTGMELLKSVGRL*MNTKAS
Trigger: ACTGGCCTTTGTGTTCATTCACAACCTCCCAACAGA...TTTTAGCAGTTCCATCCCAGTGTAAGGACCAACCCCAAAAGTTAAACTTGCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000300105.7
3UTR-3UTR CCA 90 bp GAAATTTCCAGCTCAGGAAAGCTGTTGGATTTCTGTCAGTCTGAACTGGCCCTTTTTAACTTTTGGGGTTaGTCCTTACACTGGGATGGA +
Preference number: 2 (lower is better)
Translates to: EISSSGKLLDFCQSELALFNFWG*SLHWDG
Trigger: TCCATCCCAGTGTAAGGACCAACCCCAAAAGTTAAA...AAGGGCCAGTTCAGACTGACAGAAATCCAACAGCTTTCCTGAGCTGGAAATTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000300105.7
3UTR-3UTR GCA 90 bp GGTGCAAGTTTAACTTTTGGGGTTGGTCCTTACACTGGGATGGAACTGCTAAAACGTCTTTCCCCTCTTTaGCTGAACAGCTTTATGTTT +
Preference number: 2 (lower is better)
Translates to: GASLTFGVGPYTGMELLKRLSPL*LNSFMF
Trigger: AAACATAAAGCTGTTCAGGCAAAGAGGGGAAAGACG...TTTTAGCAGTTCCATCCCAGTGTAAGGACCAACCCCAAAAGTTAAACTTGCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000300105.7
3UTR GCA 72 bp GAGGGACAAGGGCTCGGTCACCTGGAGGCCTACGATTaGCCCATCAATGCTGGGCGGAGCCGGCTCGAGCTC +
Preference number: 3 (lower is better)
Translates to: EGQGLGHLEAYD*PINAGRSRLEL
Trigger: GAGCTCGAGCCGGCTCCGCCCAGCATTGATGGGGCAATCGTAGGCCTCCAGGTGACCGAGCCCTTGTCCCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300105.7
3UTR GCA 72 bp GCTCGGTCACCTGGAGGCCTACGATTGCCCCATCAATaGTGGGCGGAGCCGGCTCGAGCTCTGAGCCTTCCT +
Preference number: 3 (lower is better)
Translates to: ARSPGGLRLPHQ*WAEPARALSLP
Trigger: AGGAAGGCTCAGAGCTCGAGCCGGCTCCGCCCAGCATTGATGGGGCAATCGTAGGCCTCCAGGTGACCGAGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300105.7
3UTR CCA 72 bp CGGTCACCTGGAGGCCTACGATTGCCCCATCAATGCTaGGCGGAGCCGGCTCGAGCTCTGAGCCTTCCTGGA +
Preference number: 3 (lower is better)
Translates to: RSPGGLRLPHQC*AEPARALSLPG
Trigger: TCCAGGAAGGCTCAGAGCTCGAGCCGGCTCCGCCCAGCATTGATGGGGCAATCGTAGGCCTCCAGGTGACCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300105.7
3UTR CCA 72 bp ACCCTAACGGAGAGGAGGGACAAGGGCTCGGTCACCTaGAGGCCTACGATTGCCCCATCAATGCTGGGCGGA +
Preference number: 3 (lower is better)
Translates to: TLTERRDKGSVT*RPTIAPSMLGG
Trigger: TCCGCCCAGCATTGATGGGGCAATCGTAGGCCTCCAGGTGACCGAGCCCTTGTCCCTCCTCTCCGTTAGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300105.7
3UTR CCA 72 bp GCCACCTTTCCATCACAGAGACCCCCTGCAGCTCACTaGGACCTTCCGCTACTCCCTCCAACCTTCAAGCCC +
Preference number: 3 (lower is better)
Translates to: ATFPSQRPPAAH*DLPLLPPTFKP
Trigger: GGGCTTGAAGGTTGGAGGGAGTAGCGGAAGGTCCCAGTGAGCTGCAGGGGGTCTCTGTGATGGAAAGGTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300105.7
3UTR-3UTR CAA 90 bp ACCCCACACCCCAGTGGCTTTCTTCAAGCACACCCAGAACCCAGGCCTTGCGCCTTTGCAGTGTCATTGTaGAACCCGCTGGGCCCCAAG +
Preference number: 3 (lower is better)
Translates to: TPHPSGFLQAHPEPRPCAFAVSL*NPLGPK
Trigger: CTTGGGGCCCAGCGGGTTCAACAATGACACTGCAAA...GGCGCAAGGCCTGGGTTCTGGGTGTGCTTGAAGAAAGCCACTGGGGTGTGGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000300105.7
3UTR CCA 72 bp CCTTCTCAGCCATGGCGATGTCACCCCACACCCCAGTaGCTTTCTTCAAGCACACCCAGAACCCAGGCCTTG +
Preference number: 3 (lower is better)
Translates to: PSQPWRCHPTPQ*LSSSTPRTQAL
Trigger: CAAGGCCTGGGTTCTGGGTGTGCTTGAAGAAAGCCACTGGGGTGTGGGGTGACATCGCCATGGCTGAGAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300105.7
3UTR-3UTR CAA 90 bp GGCAGGTGTTCGGGGAGCACAGTGAGGAGGTATATGGTGTGTGTGTGTGTGTGTGGGGTTTCCGGCATCTaGGTAAGCCACCGGCAGCCT +
Preference number: 3 (lower is better)
Translates to: GRCSGSTVRRYMVCVCVCGVSGI*VSHRQP
Trigger: AGGCTGCCGGTGGCTTACCAAGATGCCGGAAACCCC...ACACACACACACACACACCATATACCTCCTCACTGTGCTCCCCGAACACCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300105.7
3UTR-3UTR CAA 90 bp ACCCCACACCCCAGTGGCTTTCTTCAAGCACACCCAGAACCCAGGCCTTGCGCCCCGATGTTCTGCCCCTaGCTGACCTGGGAAAATAAC +
Preference number: 3 (lower is better)
Translates to: TPHPSGFLQAHPEPRPCAPMFCP*LTWENN
Trigger: GTTATTTTCCCAGGTCAGCAAGGGGCAGAACATCGG...GGCGCAAGGCCTGGGTTCTGGGTGTGCTTGAAGAAAGCCACTGGGGTGTGGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000300105.7
3UTR GCA 72 bp GAGCTCAACCTCAGGAAATGCCGGTGTCAAGAAAAATaGAAACCGGGGGAGACTCGCAGGCAGAGGCAGGGG +
Preference number: 3 (lower is better)
Translates to: ELNLRKCRCQEK*KPGETRRQRQG
Trigger: CCCCTGCCTCTGCCTGCGAGTCTCCCCCGGTTTGCATTTTTCTTGACACCGGCATTTCCTGAGGTTGAGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000300105.7
3UTR-3UTR CAA 90 bp TGGTTGTTGTTACCACACCTTGAATTGTCTCCCATTGTTCTGCCCCAGGGCCCACCTGGAGGCCTACGATaGCCCCATCAATGCTGGGCG +
Preference number: 3 (lower is better)
Translates to: WLLLPHLELSPIVLPQGPPGGLR*PHQCWA
Trigger: CGCCCAGCATTGATGGGGCAATCGTAGGCCTCCAGG...TGGGCCCTGGGGCAGAACAATGGGAGACAATTCAAGGTGTGGTAACAACAACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300105.7
3UTR TCA 72 bp TGCAGTGCTGGGCTAAGTGGACTGTGTATGTGTGTGTaGACGTGCCTGTGTGCGTGTGGGGTGTGTGGTCTC +
Preference number: 3 (lower is better)
Translates to: CSAGLSGLCMCV*TCLCACGVCGL
Trigger: GAGACCACACACCCCACACGCACACAGGCACGTTCACACACACATACACAGTCCACTTAGCCCAGCACTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300105.7
3UTR CCA 72 bp GGAAGTCATCACAGTGGGTTAAGGAGCATTAAGGACTaGGAACCTGGGGCCAGGCAAGCCCCAAGTGTACCC +
Preference number: 3 (lower is better)
Translates to: GSHHSGLRSIKD*EPGARQAPSVP
Trigger: GGGTACACTTGGGGCTTGCCTGGCCCCAGGTTCCCAGTCCTTAATGCTCCTTAACCCACTGTGATGACTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300105.7
3UTR CCA 72 bp AGAGGCCATGCAGCAAGGAATTCCGGAATCCAGTCCTaGATTCTAGACGGGTGCCCTTCCCATGCATGCGAG +
Preference number: 3 (lower is better)
Translates to: RGHAARNSGIQS*ILDGCPSHACE
Trigger: CTCGCATGCATGGGAAGGGCACCCGTCTAGAATCCAGGACTGGATTCCGGAATTCCTTGCTGCATGGCCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300105.7
3UTR CCA 72 bp TTCGCTCTCATCCTTGATCCCTTTAGGTCTGGAATCTaGTGGGATGGCGGGCAAGATTGGGGTGGGAGAGGG +
Preference number: 3 (lower is better)
Translates to: FALILDPFRSGI*WDGGQDWGGRG
Trigger: CCCTCTCCCACCCCAATCTTGCCCGCCATCCCACCAGATTCCAGACCTAAAGGGATCAAGGATGAGAGCGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300105.7
3UTR CCA 72 bp TTCTTCAAGCACACCCAGAACCCAGGCCTTGCGCCATaGAAAGAAGCACTGATCGCCTTCCCAGACGCTCTG +
Preference number: 3 (lower is better)
Translates to: FFKHTQNPGLAP*KEALIAFPDAL
Trigger: CAGAGCGTCTGGGAAGGCGATCAGTGCTTCTTTCCATGGCGCAAGGCCTGGGTTCTGGGTGTGCTTGAAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300105.7
3UTR-3UTR CAA 90 bp ACCCCACACCCCAGTGGCTTTCTTCAAGCACACCCAGAACCCAGGCCTTGCGCCATTTTTGCTTTGACATaGGATGTGGGGGCAGGTGTT +
Preference number: 3 (lower is better)
Translates to: TPHPSGFLQAHPEPRPCAIFALT*DVGAGV
Trigger: AACACCTGCCCCCACATCCAATGTCAAAGCAAAAAT...GGCGCAAGGCCTGGGTTCTGGGTGTGCTTGAAGAAAGCCACTGGGGTGTGGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000300105.7
3UTR GCA 72 bp AGGAATTCCGGAATCCAGTCCTGGATTCTAGACGGGTaGCCTTCCCATGCATGCGAGTGGTGTGTGTGTGTG +
Preference number: 3 (lower is better)
Translates to: RNSGIQSWILDG*PSHACEWCVCV
Trigger: CACACACACACACCACTCGCATGCATGGGAAGGGCACCCGTCTAGAATCCAGGACTGGATTCCGGAATTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300105.7
3UTR GCA 72 bp AGTGGCTTTCTTCAAGCACACCCAGAACCCAGGCCTTaGGCCATGGAAAGAAGCACTGATCGCCTTCCCAGA +
Preference number: 3 (lower is better)
Translates to: SGFLQAHPEPRP*AMERSTDRLPR
Trigger: TCTGGGAAGGCGATCAGTGCTTCTTTCCATGGCGCAAGGCCTGGGTTCTGGGTGTGCTTGAAGAAAGCCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300105.7
3UTR CCA 72 bp AGTCAATTTCCTTTGAGCCACGCCCCTGGCCGTGTATaGGATGGAAGGGTTGAGACTGAGTGTGTCCCTGTG +
Preference number: 3 (lower is better)
Translates to: SQFPLSHAPGRV*DGRVETECVPV
Trigger: CACAGGGACACACTCAGTCTCAACCCTTCCATCCCATACACGGCCAGGGGCGTGGCTCAAAGGAAATTGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300105.7
3UTR CCA 72 bp TGGATTCTAGACGGGTGCCCTTCCCATGCATGCGAGTaGTGTGTGTGTGTGTGTGGGTATGTGTGCGTGTGT +
Preference number: 3 (lower is better)
Translates to: WILDGCPSHACE*CVCVCGYVCVC
Trigger: ACACACGCACACATACCCACACACACACACACACCACTCGCATGCATGGGAAGGGCACCCGTCTAGAATCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300105.7
3UTR-3UTR CAA 90 bp TTGGTGGCAGCTGTCCTGGTCATCCCTGGCATATCCTCGGGGCAGGTGGCAGATTTTTTGTTTTTGCTTTaGGAAGGTCTCCCAGCGGAG +
Preference number: 3 (lower is better)
Translates to: LVAAVLVIPGISSGQVADFLFLL*EGLPAE
Trigger: CTCCGCTGGGAGACCTTCCAAAAGCAAAAACAAAAA...ATCTGCCACCTGCCCCGAGGATATGCCAGGGATGACCAGGACAGCTGCCACCAA
54% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000300105.7
3UTR-3UTR CAA 90 bp TTGGTGGCAGCTGTCCTGGTCATCCCTGGCATATCCTCGGGGCAGGTGGCAGATTGGTCTCTTTCTTTGTaGGATTCTGTCTTCCCCCAT +
Preference number: 3 (lower is better)
Translates to: LVAAVLVIPGISSGQVADWSLSL*DSVFPH
Trigger: ATGGGGGAAGACAGAATCCAACAAAGAAAGAGACCA...ATCTGCCACCTGCCCCGAGGATATGCCAGGGATGACCAGGACAGCTGCCACCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300105.7
3UTR-3UTR CAA 90 bp GGCAGGTGTTCGGGGAGCACAGTGAGGAGGTATATGGTGTGTGTGTGTGTGTGTTATGGGATGGAAGGGTaGAGACTGAGTGTGTCCCTG +
Preference number: 3 (lower is better)
Translates to: GRCSGSTVRRYMVCVCVCYGMEG*RLSVSL
Trigger: CAGGGACACACTCAGTCTCAACCCTTCCATCCCATA...ACACACACACACACACACCATATACCTCCTCACTGTGCTCCCCGAACACCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300105.7
3UTR TCA 72 bp ACATTGGATGTGGGGGCAGGTGTTCGGGGAGCACAGTaGGGAGGTATATGGTGTGTGTGTGTGTGTGTGTCT +
Preference number: 3 (lower is better)
Translates to: TLDVGAGVRGAQ*GGIWCVCVCVS
Trigger: AGACACACACACACACACACACCATATACCTCCTCACTGTGCTCCCCGAACACCTGCCCCCACATCCAATGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300105.7
3UTR GCA 72 bp GGAAGGGTTGAGACTGAGTGTGTCCCTGTGAGTGACTaGAGTGCTGGGCTAAGTGGACTGTGTATGTGTGTG +
Preference number: 3 (lower is better)
Translates to: GRVETECVPVSD*SAGLSGLCMCV
Trigger: CACACACATACACAGTCCACTTAGCCCAGCACTGCAGTCACTCACAGGGACACACTCAGTCTCAACCCTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300105.7
3UTR GCA 72 bp TGTTGTTACCACACCTTGAATTGTCTCCCATTGTTCTaGCCCAGGGCCCATGACCTCCCCCTGTACTTCTGG +
Preference number: 3 (lower is better)
Translates to: CCYHTLNCLPLF*PRAHDLPLYFW
Trigger: CCAGAAGTACAGGGGGAGGTCATGGGCCCTGGGGCAGAACAATGGGAGACAATTCAAGGTGTGGTAACAACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300105.7
3UTR-3UTR CAA 90 bp TGGGGGCAGGTGTTCGGGGAGCACAGTGAGGAGGTATATGGTGTGTGTGTGTGTGTGTGGTCTCTTTCTTaGTTGGATTCTGTCTTCCCC +
Preference number: 3 (lower is better)
Translates to: WGQVFGEHSEEVYGVCVCVWSLS*LDSVFP
Trigger: GGGGAAGACAGAATCCAACAAAGAAAGAGACCACAC...ACACACACACACACCATATACCTCCTCACTGTGCTCCCCGAACACCTGCCCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300105.7
3UTR-3UTR CAA 90 bp TTCTTCAAGCACACCCAGAACCCAGGCCTTGCGCCATGGAAAGAAGCACTGATCAAGGCCAGTGTGGAGTaGTTGTCGTCCATGGCTTTG +
Preference number: 3 (lower is better)
Translates to: FFKHTQNPGLAPWKEALIKASVE*LSSMAL
Trigger: CAAAGCCATGGACGACAACAACTCCACACTGGCCTT...GATCAGTGCTTCTTTCCATGGCGCAAGGCCTGGGTTCTGGGTGTGCTTGAAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300105.7
3UTR TCA 72 bp CAGACTGAGGGCAACTTGGTTGTTGTTACCACACCTTaGATTGTCTCCCATTGTTCTGCCCCAGGGCCCATG +
Preference number: 3 (lower is better)
Translates to: QTEGNLVVVTTP*IVSHCSAPGPM
Trigger: CATGGGCCCTGGGGCAGAACAATGGGAGACAATTCAAGGTGTGGTAACAACAACCAAGTTGCCCTCAGTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300105.7
3UTR-3UTR CAA 90 bp GGCAGGTGTTCGGGGAGCACAGTGAGGAGGTATATGGTGTGTGTGTGTGTGTGTTTGTCGTCCATGGCTTaGGAGGGCATGAGTCAATTT +
Preference number: 3 (lower is better)
Translates to: GRCSGSTVRRYMVCVCVCLSSMA*EGMSQF
Trigger: AAATTGACTCATGCCCTCCAAAGCCATGGACGACAA...ACACACACACACACACACCATATACCTCCTCACTGTGCTCCCCGAACACCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300105.7
3UTR-3UTR CAA 90 bp TTCTTCAAGCACACCCAGAACCCAGGCCTTGCGCCATGGAAAGAAGCACTGATCAAACACAGGATGCCCTaGACCTTTAGTCTGTGGTGC +
Preference number: 3 (lower is better)
Translates to: FFKHTQNPGLAPWKEALIKHRMP*TFSLWC
Trigger: GCACCACAGACTAAAGGTCAAGGGCATCCTGTGTTT...GATCAGTGCTTCTTTCCATGGCGCAAGGCCTGGGTTCTGGGTGTGCTTGAAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300105.7
3UTR-3UTR CAA 90 bp TGGTTGTTGTTACCACACCTTGAATTGTCTCCCATTGTTCTGCCCCAGGGCCCAAGTCTGAACTGGCCCTaGTCACTCTGGGGAAGAAAG +
Preference number: 3 (lower is better)
Translates to: WLLLPHLELSPIVLPQGPSLNWP*SLWGRK
Trigger: CTTTCTTCCCCAGAGTGACAAGGGCCAGTTCAGACT...TGGGCCCTGGGGCAGAACAATGGGAGACAATTCAAGGTGTGGTAACAACAACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300105.7
3UTR CCA 72 bp CTGTCCTGGTCATCCCTGGCATATCCTCGGGGCAGGTaGCAGATCTTAAGTCACAGATACATAGAGCAAGAA +
Preference number: 3 (lower is better)
Translates to: LSWSSLAYPRGR*QILSHRYIEQE
Trigger: TTCTTGCTCTATGTATCTGTGACTTAAGATCTGCCACCTGCCCCGAGGATATGCCAGGGATGACCAGGACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300105.7
3UTR CCA 72 bp GCTCAGGAAAGCTGTTGGATTTCTGTCAGTCTGAACTaGCCCTTGTCACTCTGGGGAAGAAAGGGGAGAAAC +
Preference number: 3 (lower is better)
Translates to: AQESCWISVSLN*PLSLWGRKGRN
Trigger: GTTTCTCCCCTTTCTTCCCCAGAGTGACAAGGGCCAGTTCAGACTGACAGAAATCCAACAGCTTTCCTGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300105.7
3UTR GCA 72 bp AAGTGGACTGTGTATGTGTGTGTGAACGTGCCTGTGTaGGTGTGGGGTGTGTGGTCTCTTTCTTTGTTGGAT +
Preference number: 3 (lower is better)
Translates to: KWTVYVCVNVPV*VWGVWSLSLLD
Trigger: ATCCAACAAAGAAAGAGACCACACACCCCACACGCACACAGGCACGTTCACACACACATACACAGTCCACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300105.7
3UTR CCA 72 bp ACTGTGTATGTGTGTGTGAACGTGCCTGTGTGCGTGTaGGGTGTGTGGTCTCTTTCTTTGTTGGATTCTGTC +
Preference number: 3 (lower is better)
Translates to: TVYVCVNVPVCV*GVWSLSLLDSV
Trigger: GACAGAATCCAACAAAGAAAGAGACCACACACCCCACACGCACACAGGCACGTTCACACACACATACACAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300105.7
3UTR-3UTR CAA 90 bp GTGTGTGAACGTGCCTGTGTGCGTGTGGGGTGTGTGGTCTCTTTCTTTGTTGGATTCCCACATTTCCTGTaGTTTTGCTTCTTTGTTCCT +
Preference number: 3 (lower is better)
Translates to: VCERACVRVGCVVSFFVGFPHFL*FCFFVP
Trigger: AGGAACAAAGAAGCAAAACAACAGGAAATGTGGGAA...TCCAACAAAGAAAGAGACCACACACCCCACACGCACACAGGCACGTTCACACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300105.7
3UTR TCA 72 bp TGTGTTCATGTGTATGCTCTGTTGGGAGGTTGTGAATaGACACAAAGGCCAGTGTGGAGTTGTTGTCGTCCA +
Preference number: 3 (lower is better)
Translates to: CVHVYALLGGCE*TQRPVWSCCRP
Trigger: TGGACGACAACAACTCCACACTGGCCTTTGTGTTCATTCACAACCTCCCAACAGAGCATACACATGAACACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300105.7
3UTR GCA 72 bp GAGAAACACAGGATGCCCTTGACCTTTAGTCTGTGGTaGAAGTTTAACTTTTGGGGTTGGTCCTTACACTGG +
Preference number: 3 (lower is better)
Translates to: EKHRMPLTFSLW*KFNFWGWSLHW
Trigger: CCAGTGTAAGGACCAACCCCAAAAGTTAAACTTGCACCACAGACTAAAGGTCAAGGGCATCCTGTGTTTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300105.7
3UTR CCA 72 bp GGTAGAGTTCAGTTTCTGCCCAGACTGAGGGCAACTTaGTTGTTGTTACCACACCTTGAATTGTCTCCCATT +
Preference number: 3 (lower is better)
Translates to: GRVQFLPRLRAT*LLLPHLELSPI
Trigger: AATGGGAGACAATTCAAGGTGTGGTAACAACAACCAAGTTGCCCTCAGTCTGGGCAGAAACTGAACTCTACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300105.7
3UTR CCA 72 bp TATGTGTGCATGTGTGTGTTCATGTGTATGCTCTGTTaGGAGGTTGTGAATGAACACAAAGGCCAGTGTGGA +
Preference number: 3 (lower is better)
Translates to: YVCMCVFMCMLC*EVVNEHKGQCG
Trigger: TCCACACTGGCCTTTGTGTTCATTCACAACCTCCCAACAGAGCATACACATGAACACACACATGCACACATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300105.7
3UTR CCA 72 bp TGGCAGATCTTAAGTCACAGATACATAGAGCAAGAATaGGCCTTTAGTGCTTCTCTGGGTCAATCCACATGC +
Preference number: 3 (lower is better)
Translates to: WQILSHRYIEQE*AFSASLGQSTC
Trigger: GCATGTGGATTGACCCAGAGAAGCACTAAAGGCCCATTCTTGCTCTATGTATCTGTGACTTAAGATCTGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300105.7
3UTR CCA 72 bp CCCTTGACCTTTAGTCTGTGGTGCAAGTTTAACTTTTaGGGTTGGTCCTTACACTGGGATGGAACTGCTAAA +
Preference number: 3 (lower is better)
Translates to: PLTFSLWCKFNF*GWSLHWDGTAK
Trigger: TTTAGCAGTTCCATCCCAGTGTAAGGACCAACCCCAAAAGTTAAACTTGCACCACAGACTAAAGGTCAAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR TCA 90 bp CAATGCTGGGCGGAGCCGGCTCGAGCTCTGAGCCTTCCTGGAGTTCCTGGGGCAAGCTGGGGATGCGGGTaGTGGCAGAGGCCTGGAGGT +
Preference number: 4 (lower is better)
Translates to: QCWAEPARALSLPGVPGASWGCG*WQRPGG
Trigger: ACCTCCAGGCCTCTGCCATCACCCGCATCCCCAGCT...TGCCCCAGGAACTCCAGGAAGGCTCAGAGCTCGAGCCGGCTCCGCCCAGCATTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR GCA 90 bp CAATGCTGGGCGGAGCCGGCTCGAGCTCTGAGCCTTCCTGGAGTTCCTGGGGCAGGACCTGGCAGTGACTaGAGGCTCACCTGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: QCWAEPARALSLPGVPGAGPGSD*RLTWPQ
Trigger: CTGGGGCCAGGTGAGCCTGCAGTCACTGCCAGGTCC...TGCCCCAGGAACTCCAGGAAGGCTCAGAGCTCGAGCCGGCTCCGCCCAGCATTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR CCA 90 bp CAATGCTGGGCGGAGCCGGCTCGAGCTCTGAGCCTTCCTGGAGTTCCTGGGGCACCTCCCGCGGTCTTCTaGCGAGGCCCGCGGTCTTTA +
Preference number: 4 (lower is better)
Translates to: QCWAEPARALSLPGVPGAPPAVF*RGPRSL
Trigger: TAAAGACCGCGGGCCTCGCCAGAAGACCGCGGGAGG...TGCCCCAGGAACTCCAGGAAGGCTCAGAGCTCGAGCCGGCTCCGCCCAGCATTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300105.7
3UTR CAA 72 bp GGAGGGACAAGGGCTCGGTCACCTGGAGGCCTACGATaGCCCCATCAATGCTGGGCGGAGCCGGCTCGAGCT +
Preference number: 4 (lower is better)
Translates to: GGTRARSPGGLR*PHQCWAEPARA
Trigger: AGCTCGAGCCGGCTCCGCCCAGCATTGATGGGGCAATCGTAGGCCTCCAGGTGACCGAGCCCTTGTCCCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR GCA 90 bp TTGGTGGCAGCTGTCCTGGTCATCCCTGGCATATCCTCGGGGCAGGTGGCAGATGCGAGCTGGAGCGGCTaGGGCGCTGGTAGCGGTAGC +
Preference number: 4 (lower is better)
Translates to: LVAAVLVIPGISSGQVADASWSG*GAGSGS
Trigger: GCTACCGCTACCAGCGCCGCAGCCGCTCCAGCTCGC...ATCTGCCACCTGCCCCGAGGATATGCCAGGGATGACCAGGACAGCTGCCACCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR TCA 90 bp GCAGCTGTCCTGGTCATCCCTGGCATATCCTCGGGGCAGGTGGCAGATCTTAAGGGCGTCCCTGGAGTGTaGGGGCTCCGTGGAGCGCGA +
Preference number: 4 (lower is better)
Translates to: AAVLVIPGISSGQVADLKGVPGV*GLRGAR
Trigger: TCGCGCTCCACGGAGCCCTCACACTCCAGGGACGCC...CTTAAGATCTGCCACCTGCCCCGAGGATATGCCAGGGATGACCAGGACAGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR CCA 90 bp GTCACCCCACACCCCAGTGGCTTTCTTCAAGCACACCCAGAACCCAGGCCTTGCAGTGTGAGGGCTCCGTaGAGCGCGAGCTGGAGCGGC +
Preference number: 4 (lower is better)
Translates to: VTPHPSGFLQAHPEPRPCSVRAP*SASWSG
Trigger: GCCGCTCCAGCTCGCGCTCCACGGAGCCCTCACACT...GCAAGGCCTGGGTTCTGGGTGTGCTTGAAGAAAGCCACTGGGGTGTGGGGTGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR GCA 90 bp CTTCCTTGTCTGAGGAAGCCACCTTTCCATCACAGAGACCCCCTGCAGCTCACTAGGGAGCCGGCGTCTTaGTGCAGGGTGGGCCGCGCG +
Preference number: 4 (lower is better)
Translates to: LPCLRKPPFHHRDPLQLTREPAS*CRVGRA
Trigger: CGCGCGGCCCACCCTGCAGCAAGACGCCGGCTCCCT...AGTGAGCTGCAGGGGGTCTCTGTGATGGAAAGGTGGCTTCCTCAGACAAGGAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR GCA 90 bp GCAGCTGTCCTGGTCATCCCTGGCATATCCTCGGGGCAGGTGGCAGATCTTAAGCGCTTTCCATGGTTTTaGCCGGGCAGCGGCGGCGGC +
Preference number: 4 (lower is better)
Translates to: AAVLVIPGISSGQVADLKRFPWF*PGSGGG
Trigger: GCCGCCGCCGCTGCCCGGGCAAAACCATGGAAAGCG...CTTAAGATCTGCCACCTGCCCCGAGGATATGCCAGGGATGACCAGGACAGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR CCA 90 bp GGCAGGTGTTCGGGGAGCACAGTGAGGAGGTATATGGTGTGTGTGTGTGTGTGTTGGCGGTGGGCGTGGTaGCGGCCTTCAGGGGGTCCC +
Preference number: 4 (lower is better)
Translates to: GRCSGSTVRRYMVCVCVCWRWAW*RPSGGP
Trigger: GGGACCCCCTGAAGGCCGCCACCACGCCCACCGCCA...ACACACACACACACACACCATATACCTCCTCACTGTGCTCCCCGAACACCTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR CCA 90 bp GAGGATTCCGGGGTTTCCGGCATCTTGGTAAGCCACCGGCAGCCTCCCCTCTCCGGAGGCAGGGCCCGCTaGGGGTTAAAGGGAACAGAA +
Preference number: 4 (lower is better)
Translates to: EDSGVSGILVSHRQPPLSGGRAR*GLKGTE
Trigger: TTCTGTTCCCTTTAACCCCCAGCGGGCCCTGCCTCC...GGAGAGGGGAGGCTGCCGGTGGCTTACCAAGATGCCGGAAACCCCGGAATCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR CCA 90 bp ACCCCACACCCCAGTGGCTTTCTTCAAGCACACCCAGAACCCAGGCCTTGCGCCTTGCCCCATCAATGCTaGGCGGAGCCGGCTCGAGCT +
Preference number: 4 (lower is better)
Translates to: TPHPSGFLQAHPEPRPCALPHQC*AEPARA
Trigger: AGCTCGAGCCGGCTCCGCCCAGCATTGATGGGGCAA...GGCGCAAGGCCTGGGTTCTGGGTGTGCTTGAAGAAAGCCACTGGGGTGTGGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR TCA 90 bp CTTTCCATCACAGAGACCCCCTGCAGCTCACTGGGACCTTCCGCTACTCCCTCCCCAAGAGGCTCACCCTaGGGATTCCGGGGTTTCCGG +
Preference number: 4 (lower is better)
Translates to: LSITETPCSSLGPSATPSPRGSP*GFRGFR
Trigger: CCGGAAACCCCGGAATCCTCAGGGTGAGCCTCTTGG...GGAGGGAGTAGCGGAAGGTCCCAGTGAGCTGCAGGGGGTCTCTGTGATGGAAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR GCA 90 bp ACCCCACACCCCAGTGGCTTTCTTCAAGCACACCCAGAACCCAGGCCTTGCGCCCTGGAGGCCTACGATTaGCCCATCAATGCTGGGCGG +
Preference number: 4 (lower is better)
Translates to: TPHPSGFLQAHPEPRPCALEAYD*PINAGR
Trigger: CCGCCCAGCATTGATGGGGCAATCGTAGGCCTCCAG...GGCGCAAGGCCTGGGTTCTGGGTGTGCTTGAAGAAAGCCACTGGGGTGTGGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR GCA 90 bp CAATGCTGGGCGGAGCCGGCTCGAGCTCTGAGCCTTCCTGGAGTTCCTGGGGCATGGATTCTAGACGGGTaGCCTTCCCATGCATGCGAG +
Preference number: 4 (lower is better)
Translates to: QCWAEPARALSLPGVPGAWILDG*PSHACE
Trigger: CTCGCATGCATGGGAAGGGCACCCGTCTAGAATCCA...TGCCCCAGGAACTCCAGGAAGGCTCAGAGCTCGAGCCGGCTCCGCCCAGCATTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR CCA 90 bp TTGGTGGCAGCTGTCCTGGTCATCCCTGGCATATCCTCGGGGCAGGTGGCAGATCCCCCTGCAGCTCACTaGGACCTTCCGCTACTCCCT +
Preference number: 4 (lower is better)
Translates to: LVAAVLVIPGISSGQVADPPAAH*DLPLLP
Trigger: AGGGAGTAGCGGAAGGTCCCAGTGAGCTGCAGGGGG...ATCTGCCACCTGCCCCGAGGATATGCCAGGGATGACCAGGACAGCTGCCACCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR CCA 90 bp GAGGATTCCGGGGTTTCCGGCATCTTGGTAAGCCACCGGCAGCCTCCCCTCTCCTGTCCTGGTCATCCCTaGCATATCCTCGGGGCAGGT +
Preference number: 4 (lower is better)
Translates to: EDSGVSGILVSHRQPPLSCPGHP*HILGAG
Trigger: ACCTGCCCCGAGGATATGCCAGGGATGACCAGGACA...GGAGAGGGGAGGCTGCCGGTGGCTTACCAAGATGCCGGAAACCCCGGAATCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR CCA 90 bp CAATGCTGGGCGGAGCCGGCTCGAGCTCTGAGCCTTCCTGGAGTTCCTGGGGCAAGTGAAGAAGGGCTTTaGGGACCCCTGCGTCTTTCC +
Preference number: 4 (lower is better)
Translates to: QCWAEPARALSLPGVPGASEEGL*GPLRLS
Trigger: GGAAAGACGCAGGGGTCCCCAAAGCCCTTCTTCACT...TGCCCCAGGAACTCCAGGAAGGCTCAGAGCTCGAGCCGGCTCCGCCCAGCATTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR CCA 90 bp GTCACCCCACACCCCAGTGGCTTTCTTCAAGCACACCCAGAACCCAGGCCTTGCTTGCAGTTCCGGTCCTaGCTCCTTCCCTCCGGACCC +
Preference number: 4 (lower is better)
Translates to: VTPHPSGFLQAHPEPRPCLQFRS*LLPSGP
Trigger: GGGTCCGGAGGGAAGGAGCCAGGACCGGAACTGCAA...GCAAGGCCTGGGTTCTGGGTGTGCTTGAAGAAAGCCACTGGGGTGTGGGGTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR TCA 90 bp TTGGTGGCAGCTGTCCTGGTCATCCCTGGCATATCCTCGGGGCAGGTGGCAGATAGGAGCTTGGGGACATaGCCCCAAGAGGCTCACCCT +
Preference number: 4 (lower is better)
Translates to: LVAAVLVIPGISSGQVADRSLGT*PQEAHP
Trigger: AGGGTGAGCCTCTTGGGGTCATGTCCCCAAGCTCCT...ATCTGCCACCTGCCCCGAGGATATGCCAGGGATGACCAGGACAGCTGCCACCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR TCA 90 bp GAGGATTCCGGGGTTTCCGGCATCTTGGTAAGCCACCGGCAGCCTCCCCTCTCCGGTCTGAGCTGGACATaGGCAATCATCCACACCCCT +
Preference number: 4 (lower is better)
Translates to: EDSGVSGILVSHRQPPLSGLSWT*AIIHTP
Trigger: AGGGGTGTGGATGATTGCTCATGTCCAGCTCAGACC...GGAGAGGGGAGGCTGCCGGTGGCTTACCAAGATGCCGGAAACCCCGGAATCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR GCA 90 bp CTTTCCATCACAGAGACCCCCTGCAGCTCACTGGGACCTTCCGCTACTCCCTCCCGGGTGCCCTTCCCATaGATGCGAGTGGTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: LSITETPCSSLGPSATPSRVPFP*MRVVCV
Trigger: CACACACACCACTCGCATGCATGGGAAGGGCACCCG...GGAGGGAGTAGCGGAAGGTCCCAGTGAGCTGCAGGGGGTCTCTGTGATGGAAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR GCA 90 bp ACCCCACACCCCAGTGGCTTTCTTCAAGCACACCCAGAACCCAGGCCTTGCGCCCAGTGCTCGCTTGGGTaGGGTTTTCTTGGGGACCCT +
Preference number: 4 (lower is better)
Translates to: TPHPSGFLQAHPEPRPCAQCSLG*GFLGDP
Trigger: AGGGTCCCCAAGAAAACCGCACCCAAGCGAGCACTG...GGCGCAAGGCCTGGGTTCTGGGTGTGCTTGAAGAAAGCCACTGGGGTGTGGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR CCA 90 bp GTGTGTGAACGTGCCTGTGTGCGTGTGGGGTGTGTGGTCTCTTTCTTTGTTGGACGGGGGAGGCGTCCCTaGAGTGTGAGGGCTCCGTGG +
Preference number: 4 (lower is better)
Translates to: VCERACVRVGCVVSFFVGRGRRP*SVRAPW
Trigger: CCACGGAGCCCTCACACTCCAGGGACGCCTCCCCCG...TCCAACAAAGAAAGAGACCACACACCCCACACGCACACAGGCACGTTCACACAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR CCA 90 bp GAGGATTCCGGGGTTTCCGGCATCTTGGTAAGCCACCGGCAGCCTCCCCTCTCCAGGAGCATTAAGGACTaGGAACCTGGGGCCAGGCAA +
Preference number: 4 (lower is better)
Translates to: EDSGVSGILVSHRQPPLSRSIKD*EPGARQ
Trigger: TTGCCTGGCCCCAGGTTCCCAGTCCTTAATGCTCCT...GGAGAGGGGAGGCTGCCGGTGGCTTACCAAGATGCCGGAAACCCCGGAATCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR CCA 90 bp ACCCCACACCCCAGTGGCTTTCTTCAAGCACACCCAGAACCCAGGCCTTGCGCCCCAGGCCTTGCGCCATaGAAAGAAGCACTGATCGCC +
Preference number: 4 (lower is better)
Translates to: TPHPSGFLQAHPEPRPCAPGLAP*KEALIA
Trigger: GGCGATCAGTGCTTCTTTCCATGGCGCAAGGCCTGG...GGCGCAAGGCCTGGGTTCTGGGTGTGCTTGAAGAAAGCCACTGGGGTGTGGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR TCA 90 bp GTCACCCCACACCCCAGTGGCTTTCTTCAAGCACACCCAGAACCCAGGCCTTGCCTGCGGCCTGCGCCATaGAAATCCTTTGCTTCGCCA +
Preference number: 4 (lower is better)
Translates to: VTPHPSGFLQAHPEPRPCLRPAP*KSFASP
Trigger: TGGCGAAGCAAAGGATTTTCATGGCGCAGGCCGCAG...GCAAGGCCTGGGTTCTGGGTGTGCTTGAAGAAAGCCACTGGGGTGTGGGGTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR TCA 90 bp CTTTCCATCACAGAGACCCCCTGCAGCTCACTGGGACCTTCCGCTACTCCCTCCGTGTGTCCCTGTGAGTaGCTGCAGTGCTGGGCTAAG +
Preference number: 4 (lower is better)
Translates to: LSITETPCSSLGPSATPSVCPCE*LQCWAK
Trigger: CTTAGCCCAGCACTGCAGTCACTCACAGGGACACAC...GGAGGGAGTAGCGGAAGGTCCCAGTGAGCTGCAGGGGGTCTCTGTGATGGAAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR TCA 90 bp CTTTCCATCACAGAGACCCCCTGCAGCTCACTGGGACCTTCCGCTACTCCCTCCGTGTGTCTGAGAGGCTaGCTGATGATGAGCCTGGGG +
Preference number: 4 (lower is better)
Translates to: LSITETPCSSLGPSATPSVCLRG*LMMSLG
Trigger: CCCCAGGCTCATCATCAGTCAGCCTCTCAGACACAC...GGAGGGAGTAGCGGAAGGTCCCAGTGAGCTGCAGGGGGTCTCTGTGATGGAAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR GCA 90 bp CCCCATTCGCAGCACCTTCCTTGTCTGAGGAAGCCACCTTTCCATCACAGAGACGCCCTTGAGCTCAGCTaGACAGGTGCGGGGGTCTCG +
Preference number: 4 (lower is better)
Translates to: PHSQHLPCLRKPPFHHRDALELS*TGAGVS
Trigger: CGAGACCCCCGCACCTGTGCAGCTGAGCTCAAGGGC...GTCTCTGTGATGGAAAGGTGGCTTCCTCAGACAAGGAAGGTGCTGCGAATGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR GCA 90 bp GTCACCCCACACCCCAGTGGCTTTCTTCAAGCACACCCAGAACCCAGGCCTTGCTGTCTCCCATTGTTCTaGCCCAGGGCCCATGACCTC +
Preference number: 4 (lower is better)
Translates to: VTPHPSGFLQAHPEPRPCCLPLF*PRAHDL
Trigger: GAGGTCATGGGCCCTGGGGCAGAACAATGGGAGACA...GCAAGGCCTGGGTTCTGGGTGTGCTTGAAGAAAGCCACTGGGGTGTGGGGTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR GCA 90 bp ACCCCACACCCCAGTGGCTTTCTTCAAGCACACCCAGAACCCAGGCCTTGCGCCCCAGAACCCAGGCCTTaGGCCATGGAAAGAAGCACT +
Preference number: 4 (lower is better)
Translates to: TPHPSGFLQAHPEPRPCAPEPRP*AMERST
Trigger: AGTGCTTCTTTCCATGGCGCAAGGCCTGGGTTCTGG...GGCGCAAGGCCTGGGTTCTGGGTGTGCTTGAAGAAAGCCACTGGGGTGTGGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR CCA 90 bp TGGTTGTTGTTACCACACCTTGAATTGTCTCCCATTGTTCTGCCCCAGGGCCCAAGGTGGCGGTGGGCGTaGTGGCGGCCTTCAGGGGGT +
Preference number: 4 (lower is better)
Translates to: WLLLPHLELSPIVLPQGPRWRWA*WRPSGG
Trigger: ACCCCCTGAAGGCCGCCACCACGCCCACCGCCACCT...TGGGCCCTGGGGCAGAACAATGGGAGACAATTCAAGGTGTGGTAACAACAACCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR CCA 90 bp GGCATCAGTGAGTCCAAGGACCCCCAAAGGGTCAATGAACCCCCTTCCCAGGGGGCCCCTGGCCGTGTATaGGATGGAAGGGTTGAGACT +
Preference number: 4 (lower is better)
Translates to: GISESKDPQRVNEPPSQGAPGRV*DGRVET
Trigger: AGTCTCAACCCTTCCATCCCATACACGGCCAGGGGC...CCCCTGGGAAGGGGGTTCATTGACCCTTTGGGGGTCCTTGGACTCACTGATGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR CCA 90 bp GTCACCCCACACCCCAGTGGCTTTCTTCAAGCACACCCAGAACCCAGGCCTTGCCGGGCAAGATTGGGGTaGGAGAGGGGTAGAGTTCAG +
Preference number: 4 (lower is better)
Translates to: VTPHPSGFLQAHPEPRPCRARLG*ERGRVQ
Trigger: CTGAACTCTACCCCTCTCCCACCCCAATCTTGCCCG...GCAAGGCCTGGGTTCTGGGTGTGCTTGAAGAAAGCCACTGGGGTGTGGGGTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR CCA 90 bp GTCACCCCACACCCCAGTGGCTTTCTTCAAGCACACCCAGAACCCAGGCCTTGCTGGAATCTGGTGGGATaGCGGGCAAGATTGGGGTGG +
Preference number: 4 (lower is better)
Translates to: VTPHPSGFLQAHPEPRPCWNLVG*RARLGW
Trigger: CCACCCCAATCTTGCCCGCCATCCCACCAGATTCCA...GCAAGGCCTGGGTTCTGGGTGTGCTTGAAGAAAGCCACTGGGGTGTGGGGTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR CCA 90 bp ACCCCACACCCCAGTGGCTTTCTTCAAGCACACCCAGAACCCAGGCCTTGCGCCAGGTCTGGAATCTGGTaGGATGGCGGGCAAGATTGG +
Preference number: 4 (lower is better)
Translates to: TPHPSGFLQAHPEPRPCARSGIW*DGGQDW
Trigger: CCAATCTTGCCCGCCATCCCACCAGATTCCAGACCT...GGCGCAAGGCCTGGGTTCTGGGTGTGCTTGAAGAAAGCCACTGGGGTGTGGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR CCA 90 bp TTGGTGGCAGCTGTCCTGGTCATCCCTGGCATATCCTCGGGGCAGGTGGCAGATTGGGTGCGGTTTTCTTaGGGACCCTCCCTTCTCCCT +
Preference number: 4 (lower is better)
Translates to: LVAAVLVIPGISSGQVADWVRFS*GPSLLP
Trigger: AGGGAGAAGGGAGGGTCCCCAAGAAAACCGCACCCA...ATCTGCCACCTGCCCCGAGGATATGCCAGGGATGACCAGGACAGCTGCCACCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR TCA 90 bp CCACCTTTCCATCACAGAGACCCCCTGCAGCTCACTGGGACCTTCCGCTACTCCTCCCAAATCCTAAAATaGGCGCTCTCCTGGGCTCCC +
Preference number: 4 (lower is better)
Translates to: PPFHHRDPLQLTGTFRYSSQILK*ALSWAP
Trigger: GGGAGCCCAGGAGAGCGCTCATTTTAGGATTTGGGA...GGAGTAGCGGAAGGTCCCAGTGAGCTGCAGGGGGTCTCTGTGATGGAAAGGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR TCA 90 bp GGCAGGTGTTCGGGGAGCACAGTGAGGAGGTATATGGTGTGTGTGTGTGTGTGTCATTACGGGTGGTGCTaGACCGGACAGCTCCCTGCG +
Preference number: 4 (lower is better)
Translates to: GRCSGSTVRRYMVCVCVCHYGWC*TGQLPA
Trigger: CGCAGGGAGCTGTCCGGTTCAGCACCACCCGTAATG...ACACACACACACACACACCATATACCTCCTCACTGTGCTCCCCGAACACCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR GCA 90 bp GCAGCTGTCCTGGTCATCCCTGGCATATCCTCGGGGCAGGTGGCAGATCTTAAGGTAGAACTCGCTGGCTaGGATGCAGAGGCCACCCAT +
Preference number: 4 (lower is better)
Translates to: AAVLVIPGISSGQVADLKVELAG*DAEATH
Trigger: ATGGGTGGCCTCTGCATCGCAGCCAGCGAGTTCTAC...CTTAAGATCTGCCACCTGCCCCGAGGATATGCCAGGGATGACCAGGACAGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR GCA 90 bp GGCAGGTGTTCGGGGAGCACAGTGAGGAGGTATATGGTGTGTGTGTGTGTGTGTCGATTGCCCCATCAATaGTGGGCGGAGCCGGCTCGA +
Preference number: 4 (lower is better)
Translates to: GRCSGSTVRRYMVCVCVCRLPHQ*WAEPAR
Trigger: TCGAGCCGGCTCCGCCCAGCATTGATGGGGCAATCG...ACACACACACACACACACCATATACCTCCTCACTGTGCTCCCCGAACACCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR GCA 90 bp CCACCTTTCCATCACAGAGACCCCCTGCAGCTCACTGGGACCTTCCGCTACTCCTGCCCTTCCCATGCATaGGAGTGGTGTGTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: PPFHHRDPLQLTGTFRYSCPSHA*EWCVCV
Trigger: CACACACACACACCACTCGCATGCATGGGAAGGGCA...GGAGTAGCGGAAGGTCCCAGTGAGCTGCAGGGGGTCTCTGTGATGGAAAGGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR CCA 90 bp CTTCCTTGTCTGAGGAAGCCACCTTTCCATCACAGAGACCCCCTGCAGCTCACTGGGTCTCGCTTTCCATaGTTTTGCCCGGGCAGCGGC +
Preference number: 4 (lower is better)
Translates to: LPCLRKPPFHHRDPLQLTGSRFP*FCPGSG
Trigger: GCCGCTGCCCGGGCAAAACCATGGAAAGCGAGACCC...AGTGAGCTGCAGGGGGTCTCTGTGATGGAAAGGTGGCTTCCTCAGACAAGGAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR CCA 90 bp CAATGCTGGGCGGAGCCGGCTCGAGCTCTGAGCCTTCCTGGAGTTCCTGGGGCAAATCACACTCAGGATTaGGAAAATGCTGGAGGCCCT +
Preference number: 4 (lower is better)
Translates to: QCWAEPARALSLPGVPGANHTQD*ENAGGP
Trigger: AGGGCCTCCAGCATTTTCCCAATCCTGAGTGTGATT...TGCCCCAGGAACTCCAGGAAGGCTCAGAGCTCGAGCCGGCTCCGCCCAGCATTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR CCA 90 bp TTGGTGGCAGCTGTCCTGGTCATCCCTGGCATATCCTCGGGGCAGGTGGCAGATTTTTGGAGTCGCTCTTaGAGGGGTCTCCGGCATTGG +
Preference number: 4 (lower is better)
Translates to: LVAAVLVIPGISSGQVADFWSRS*RGLRHW
Trigger: CCAATGCCGGAGACCCCTCCAAGAGCGACTCCAAAA...ATCTGCCACCTGCCCCGAGGATATGCCAGGGATGACCAGGACAGCTGCCACCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR CCA 90 bp CTTCCTTGTCTGAGGAAGCCACCTTTCCATCACAGAGACCCCCTGCAGCTCACTAGTTGTAGGTGGCGGTaGGCGTGGTGGCGGCCTTCA +
Preference number: 4 (lower is better)
Translates to: LPCLRKPPFHHRDPLQLTSCRWR*AWWRPS
Trigger: TGAAGGCCGCCACCACGCCCACCGCCACCTACAACT...AGTGAGCTGCAGGGGGTCTCTGTGATGGAAAGGTGGCTTCCTCAGACAAGGAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR CCA 90 bp TTGGTGGCAGCTGTCCTGGTCATCCCTGGCATATCCTCGGGGCAGGTGGCAGATGGCGGTTGGCTGTGTTaGAGTGGAGAGAGTCCTTGT +
Preference number: 4 (lower is better)
Translates to: LVAAVLVIPGISSGQVADGGWLC*SGESPC
Trigger: ACAAGGACTCTCTCCACTCCAACACAGCCAACCGCC...ATCTGCCACCTGCCCCGAGGATATGCCAGGGATGACCAGGACAGCTGCCACCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR CCA 90 bp GTCACCCCACACCCCAGTGGCTTTCTTCAAGCACACCCAGAACCCAGGCCTTGCTCCGGAATCCAGTCCTaGATTCTAGACGGGTGCCCT +
Preference number: 4 (lower is better)
Translates to: VTPHPSGFLQAHPEPRPCSGIQS*ILDGCP
Trigger: AGGGCACCCGTCTAGAATCCAGGACTGGATTCCGGA...GCAAGGCCTGGGTTCTGGGTGTGCTTGAAGAAAGCCACTGGGGTGTGGGGTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR TCA 90 bp TTGGTGGCAGCTGTCCTGGTCATCCCTGGCATATCCTCGGGGCAGGTGGCAGATAGATGGCTTCCACAGTaGACCAGGGAACAGCCGAAT +
Preference number: 4 (lower is better)
Translates to: LVAAVLVIPGISSGQVADRWLPQ*TREQPN
Trigger: ATTCGGCTGTTCCCTGGTTCACTGTGGAAGCCATCT...ATCTGCCACCTGCCCCGAGGATATGCCAGGGATGACCAGGACAGCTGCCACCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR TCA 90 bp CTTTCCATCACAGAGACCCCCTGCAGCTCACTGGGACCTTCCGCTACTCCCTCCCTATGGTCATCAGGCTaGAGGCAGCGAAAGCACCAA +
Preference number: 4 (lower is better)
Translates to: LSITETPCSSLGPSATPSLWSSG*RQRKHQ
Trigger: TTGGTGCTTTCGCTGCCTTCAGCCTGATGACCATAG...GGAGGGAGTAGCGGAAGGTCCCAGTGAGCTGCAGGGGGTCTCTGTGATGGAAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR TCA 90 bp ACCCCACACCCCAGTGGCTTTCTTCAAGCACACCCAGAACCCAGGCCTTGCGCCGCTTGCACAGACCTTTaGAATTCCCTTCTAGGCAGC +
Preference number: 4 (lower is better)
Translates to: TPHPSGFLQAHPEPRPCAACTDL*NSLLGS
Trigger: GCTGCCTAGAAGGGAATTTCAAAGGTCTGTGCAAGC...GGCGCAAGGCCTGGGTTCTGGGTGTGCTTGAAGAAAGCCACTGGGGTGTGGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR TCA 90 bp CTTCCTTGTCTGAGGAAGCCACCTTTCCATCACAGAGACCCCCTGCAGCTCACTCCAAGGGGGCATCAGTaGGTCCAAGGACCCCCAAAG +
Preference number: 4 (lower is better)
Translates to: LPCLRKPPFHHRDPLQLTPRGHQ*VQGPPK
Trigger: CTTTGGGGGTCCTTGGACTCACTGATGCCCCCTTGG...AGTGAGCTGCAGGGGGTCTCTGTGATGGAAAGGTGGCTTCCTCAGACAAGGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR TCA 90 bp GAGGATTCCGGGGTTTCCGGCATCTTGGTAAGCCACCGGCAGCCTCCCCTCTCCTCTGTTGGGAGGTTGTaGATGAACACAAAGGCCAGT +
Preference number: 4 (lower is better)
Translates to: EDSGVSGILVSHRQPPLSSVGRL*MNTKAS
Trigger: ACTGGCCTTTGTGTTCATTCACAACCTCCCAACAGA...GGAGAGGGGAGGCTGCCGGTGGCTTACCAAGATGCCGGAAACCCCGGAATCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR GCA 90 bp GAAATTTCCAGCTCAGGAAAGCTGTTGGATTTCTGTCAGTCTGAACTGGCCCTTGAGCCGGCGTCTTGCTaGAGGGTGGGCCGCGCGCCT +
Preference number: 4 (lower is better)
Translates to: EISSSGKLLDFCQSELALEPASC*RVGRAP
Trigger: AGGCGCGCGGCCCACCCTGCAGCAAGACGCCGGCTC...AAGGGCCAGTTCAGACTGACAGAAATCCAACAGCTTTCCTGAGCTGGAAATTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR GCA 90 bp CTTCCTTGTCTGAGGAAGCCACCTTTCCATCACAGAGACCCCCTGCAGCTCACTGGCTGGCCGATGTTCTaGCCCTTGCTGACCTGGGAA +
Preference number: 4 (lower is better)
Translates to: LPCLRKPPFHHRDPLQLTGWPMF*PLLTWE
Trigger: TTCCCAGGTCAGCAAGGGGCAGAACATCGGCCAGCC...AGTGAGCTGCAGGGGGTCTCTGTGATGGAAAGGTGGCTTCCTCAGACAAGGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR CCA 90 bp GCAGCTGTCCTGGTCATCCCTGGCATATCCTCGGGGCAGGTGGCAGATCTTAAGTATCTGCAAAGCTCCTaGAAACGAGGGAGCCGGCGT +
Preference number: 4 (lower is better)
Translates to: AAVLVIPGISSGQVADLKYLQSS*KRGSRR
Trigger: ACGCCGGCTCCCTCGTTTCCAGGAGCTTTGCAGATA...CTTAAGATCTGCCACCTGCCCCGAGGATATGCCAGGGATGACCAGGACAGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR CCA 90 bp GGCAGGTGTTCGGGGAGCACAGTGAGGAGGTATATGGTGTGTGTGTGTGTGTGTGCCAGTTCTCTTCCTTaGGGGGTCTCGGCGCTTTCG +
Preference number: 4 (lower is better)
Translates to: GRCSGSTVRRYMVCVCVCASSLP*GVSALS
Trigger: CGAAAGCGCCGAGACCCCCCAAGGAAGAGAACTGGC...ACACACACACACACACACCATATACCTCCTCACTGTGCTCCCCGAACACCTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR CCA 90 bp GGCATCAGTGAGTCCAAGGACCCCCAAAGGGTCAATGAACCCCCTTCCCAGGGGTTTTGTAGAACTCGCTaGCTGCGATGCAGAGGCCAC +
Preference number: 4 (lower is better)
Translates to: GISESKDPQRVNEPPSQGFCRTR*LRCRGH
Trigger: GTGGCCTCTGCATCGCAGCCAGCGAGTTCTACAAAA...CCCCTGGGAAGGGGGTTCATTGACCCTTTGGGGGTCCTTGGACTCACTGATGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR CCA 90 bp GGATTCTGTCTTCCCCCATTCGCAGCACCTTCCTTGTCTGAGGAAGCCACCTTTGGGTGGTCCGGCGGTTaGCTGTGTTGGAGTGGAGAG +
Preference number: 4 (lower is better)
Translates to: GFCLPPFAAPSLSEEATFGWSGG*LCWSGE
Trigger: CTCTCCACTCCAACACAGCCAACCGCCGGACCACCC...AAAGGTGGCTTCCTCAGACAAGGAAGGTGCTGCGAATGGGGGAAGACAGAATCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR CCA 90 bp GGCCATGCAGCAAGGAATTCCGGAATCCAGTCCTGGATTCTAGACGGGTGCCCTGTCTTTATACGGGGGTaGTCCGGCGGTTGGCTGTGT +
Preference number: 4 (lower is better)
Translates to: GHAARNSGIQSWILDGCPVFIRG*SGGWLC
Trigger: ACACAGCCAACCGCCGGACCACCCCCGTATAAAGAC...AGGGCACCCGTCTAGAATCCAGGACTGGATTCCGGAATTCCTTGCTGCATGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR CCA 90 bp CTTCCTTGTCTGAGGAAGCCACCTTTCCATCACAGAGACCCCCTGCAGCTCACTAAGGGCTCGGTCACCTaGAGGCCTACGATTGCCCCA +
Preference number: 4 (lower is better)
Translates to: LPCLRKPPFHHRDPLQLTKGSVT*RPTIAP
Trigger: TGGGGCAATCGTAGGCCTCCAGGTGACCGAGCCCTT...AGTGAGCTGCAGGGGGTCTCTGTGATGGAAAGGTGGCTTCCTCAGACAAGGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR CCA 90 bp GGCCATGCAGCAAGGAATTCCGGAATCCAGTCCTGGATTCTAGACGGGTGCCCTTTTGAGCCACGCCCCTaGCCGTGTATGGGATGGAAG +
Preference number: 4 (lower is better)
Translates to: GHAARNSGIQSWILDGCPFEPRP*PCMGWK
Trigger: CTTCCATCCCATACACGGCCAGGGGCGTGGCTCAAA...AGGGCACCCGTCTAGAATCCAGGACTGGATTCCGGAATTCCTTGCTGCATGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR CCA 90 bp CTTCCTTGTCTGAGGAAGCCACCTTTCCATCACAGAGACCCCCTGCAGCTCACTACACTGGGGAAGCCCTaGTGGCAGAGCTCTTCTCCC +
Preference number: 4 (lower is better)
Translates to: LPCLRKPPFHHRDPLQLTTLGKP*WQSSSP
Trigger: GGGAGAAGAGCTCTGCCACCAGGGCTTCCCCAGTGT...AGTGAGCTGCAGGGGGTCTCTGTGATGGAAAGGTGGCTTCCTCAGACAAGGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR CCA 90 bp CAATGCTGGGCGGAGCCGGCTCGAGCTCTGAGCCTTCCTGGAGTTCCTGGGGCATGCCCCTTGCTGACCTaGGAAAATAACTTTCCTTTC +
Preference number: 4 (lower is better)
Translates to: QCWAEPARALSLPGVPGACPLLT*ENNFPF
Trigger: GAAAGGAAAGTTATTTTCCCAGGTCAGCAAGGGGCA...TGCCCCAGGAACTCCAGGAAGGCTCAGAGCTCGAGCCGGCTCCGCCCAGCATTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR TCA 90 bp TGGTTGTTGTTACCACACCTTGAATTGTCTCCCATTGTTCTGCCCCAGGGCCCAAGCCGGCTCGAGCTCTaGGCCTTCCTGGAGTTCCTG +
Preference number: 4 (lower is better)
Translates to: WLLLPHLELSPIVLPQGPSRLEL*AFLEFL
Trigger: CAGGAACTCCAGGAAGGCTCAGAGCTCGAGCCGGCT...TGGGCCCTGGGGCAGAACAATGGGAGACAATTCAAGGTGTGGTAACAACAACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR TCA 90 bp CCACCTTTCCATCACAGAGACCCCCTGCAGCTCACTGGGACCTTCCGCTACTCCCTCTTTAACTCTCCATaGTCGCAGCAAGGGGACACA +
Preference number: 4 (lower is better)
Translates to: PPFHHRDPLQLTGTFRYSLFNSP*SQQGDT
Trigger: TGTGTCCCCTTGCTGCGATCATGGAGAGTTAAAGAG...GGAGTAGCGGAAGGTCCCAGTGAGCTGCAGGGGGTCTCTGTGATGGAAAGGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR GCA 90 bp CTTCCTTGTCTGAGGAAGCCACCTTTCCATCACAGAGACCCCCTGCAGCTCACTGGCGCTCCCACCTACTaGATTACGGGTGGTGCTGAA +
Preference number: 4 (lower is better)
Translates to: LPCLRKPPFHHRDPLQLTGAPTY*ITGGAE
Trigger: TTCAGCACCACCCGTAATGCAGTAGGTGGGAGCGCC...AGTGAGCTGCAGGGGGTCTCTGTGATGGAAAGGTGGCTTCCTCAGACAAGGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR GCA 90 bp GCAGCTGTCCTGGTCATCCCTGGCATATCCTCGGGGCAGGTGGCAGATCTTAAGTTCCCTCCCCCTATCTaGAAAGCTCCTGGAAACGAG +
Preference number: 4 (lower is better)
Translates to: AAVLVIPGISSGQVADLKFPPPI*KAPGNE
Trigger: CTCGTTTCCAGGAGCTTTGCAGATAGGGGGAGGGAA...CTTAAGATCTGCCACCTGCCCCGAGGATATGCCAGGGATGACCAGGACAGCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR GCA 90 bp CCCCATTCGCAGCACCTTCCTTGTCTGAGGAAGCCACCTTTCCATCACAGAGACCTCGGCTCTGCGGCCTaGGCCATGAAAATCCTTTGC +
Preference number: 4 (lower is better)
Translates to: PHSQHLPCLRKPPFHHRDLGSAA*AMKILC
Trigger: GCAAAGGATTTTCATGGCGCAGGCCGCAGAGCCGAG...GTCTCTGTGATGGAAAGGTGGCTTCCTCAGACAAGGAAGGTGCTGCGAATGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR GCA 90 bp TTCTTCAAGCACACCCAGAACCCAGGCCTTGCGCCATGGAAAGAAGCACTGATCCGGTCGATAAACATGTaGACCGCCAGCACCCCGACC +
Preference number: 4 (lower is better)
Translates to: FFKHTQNPGLAPWKEALIRSINM*TASTPT
Trigger: GGTCGGGGTGCTGGCGGTGCACATGTTTATCGACCG...GATCAGTGCTTCTTTCCATGGCGCAAGGCCTGGGTTCTGGGTGTGCTTGAAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR GCA 90 bp CAATTTCCTTTGAGCCACGCCCCTGGCCGTGTATGGGATGGAAGGGTTGAGACTATCACAGAGACCCCCTaGAGCTCACTGGGACCTTCC +
Preference number: 4 (lower is better)
Translates to: QFPLSHAPGRVWDGRVETITETP*SSLGPS
Trigger: GGAAGGTCCCAGTGAGCTGCAGGGGGTCTCTGTGAT...AGTCTCAACCCTTCCATCCCATACACGGCCAGGGGCGTGGCTCAAAGGAAATTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR CCA 90 bp GTGTGTGAACGTGCCTGTGTGCGTGTGGGGTGTGTGGTCTCTTTCTTTGTTGGAATGAGCCTGGGGGCTTaGTGGCAGCTGTCCTGGTCA +
Preference number: 4 (lower is better)
Translates to: VCERACVRVGCVVSFFVGMSLGA*WQLSWS
Trigger: TGACCAGGACAGCTGCCACCAAGCCCCCAGGCTCAT...TCCAACAAAGAAAGAGACCACACACCCCACACGCACACAGGCACGTTCACACAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR CCA 90 bp TTCTTCAAGCACACCCAGAACCCAGGCCTTGCGCCATGGAAAGAAGCACTGATCCTCCCCCTGTACTTCTaGGCTGGGCTGGCCGATGTT +
Preference number: 4 (lower is better)
Translates to: FFKHTQNPGLAPWKEALILPLYF*AGLADV
Trigger: AACATCGGCCAGCCCAGCCCAGAAGTACAGGGGGAG...GATCAGTGCTTCTTTCCATGGCGCAAGGCCTGGGTTCTGGGTGTGCTTGAAGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR CCA 90 bp CTTTCCATCACAGAGACCCCCTGCAGCTCACTGGGACCTTCCGCTACTCCCTCCTTTAGGTCTGGAATCTaGTGGGATGGCGGGCAAGAT +
Preference number: 4 (lower is better)
Translates to: LSITETPCSSLGPSATPSFRSGI*WDGGQD
Trigger: ATCTTGCCCGCCATCCCACCAGATTCCAGACCTAAA...GGAGGGAGTAGCGGAAGGTCCCAGTGAGCTGCAGGGGGTCTCTGTGATGGAAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300105.7
3UTR CAA 72 bp TCTTGGGGACCCTCCCTTCTCCCTTCGCTCTCATCCTaGATCCCTTTAGGTCTGGAATCTGGTGGGATGGCG +
Preference number: 4 (lower is better)
Translates to: SWGPSLLPSLSS*IPLGLESGGMA
Trigger: CGCCATCCCACCAGATTCCAGACCTAAAGGGATCAAGGATGAGAGCGAAGGGAGAAGGGAGGGTCCCCAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR TCA 90 bp GGCCATGCAGCAAGGAATTCCGGAATCCAGTCCTGGATTCTAGACGGGTGCCCTAGCACCTTCCTTGTCTaGGGAAGCCACCTTTCCATC +
Preference number: 4 (lower is better)
Translates to: GHAARNSGIQSWILDGCPSTFLV*GSHLSI
Trigger: GATGGAAAGGTGGCTTCCTCAGACAAGGAAGGTGCT...AGGGCACCCGTCTAGAATCCAGGACTGGATTCCGGAATTCCTTGCTGCATGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR TCA 90 bp TGGTTGTTGTTACCACACCTTGAATTGTCTCCCATTGTTCTGCCCCAGGGCCCACTGAGTGTGTCCCTGTaGGTGACTGCAGTGCTGGGC +
Preference number: 4 (lower is better)
Translates to: WLLLPHLELSPIVLPQGPLSVSL*VTAVLG
Trigger: GCCCAGCACTGCAGTCACTCACAGGGACACACTCAG...TGGGCCCTGGGGCAGAACAATGGGAGACAATTCAAGGTGTGGTAACAACAACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR TCA 90 bp GGCAGGTGTTCGGGGAGCACAGTGAGGAGGTATATGGTGTGTGTGTGTGTGTGTGTTCGGGGAGCACAGTaGGGAGGTATATGGTGTGTG +
Preference number: 4 (lower is better)
Translates to: GRCSGSTVRRYMVCVCVCVRGAQ*GGIWCV
Trigger: CACACACCATATACCTCCTCACTGTGCTCCCCGAAC...ACACACACACACACACACCATATACCTCCTCACTGTGCTCCCCGAACACCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR TCA 90 bp CAATTTCCTTTGAGCCACGCCCCTGGCCGTGTATGGGATGGAAGGGTTGAGACTCATGGAAAGAAGCACTaGTCGCCTTCCCAGACGCTC +
Preference number: 4 (lower is better)
Translates to: QFPLSHAPGRVWDGRVETHGKKH*SPSQTL
Trigger: GAGCGTCTGGGAAGGCGATCAGTGCTTCTTTCCATG...AGTCTCAACCCTTCCATCCCATACACGGCCAGGGGCGTGGCTCAAAGGAAATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR TCA 90 bp CCACCTTTCCATCACAGAGACCCCCTGCAGCTCACTGGGACCTTCCGCTACTCCTGGAGGTTAGTTTCTTaGACTGGTCTGAGCTGGACA +
Preference number: 4 (lower is better)
Translates to: PPFHHRDPLQLTGTFRYSWRLVS*TGLSWT
Trigger: TGTCCAGCTCAGACCAGTTCAAGAAACTAACCTCCA...GGAGTAGCGGAAGGTCCCAGTGAGCTGCAGGGGGTCTCTGTGATGGAAAGGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR GCA 90 bp GTCACCCCACACCCCAGTGGCTTTCTTCAAGCACACCCAGAACCCAGGCCTTGCGTCAGCTTCGTAATCTaGATCCTCTGGGAAGTGATC +
Preference number: 4 (lower is better)
Translates to: VTPHPSGFLQAHPEPRPCVSFVI*ILWEVI
Trigger: GATCACTTCCCAGAGGATGCAGATTACGAAGCTGAC...GCAAGGCCTGGGTTCTGGGTGTGCTTGAAGAAAGCCACTGGGGTGTGGGGTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR GCA 90 bp TTGGTGGCAGCTGTCCTGGTCATCCCTGGCATATCCTCGGGGCAGGTGGCAGATGATGTTACTCAGACCTaGAGACACGAAGAAGATGCC +
Preference number: 4 (lower is better)
Translates to: LVAAVLVIPGISSGQVADDVTQT*RHEEDA
Trigger: GGCATCTTCTTCGTGTCTGCAGGTCTGAGTAACATC...ATCTGCCACCTGCCCCGAGGATATGCCAGGGATGACCAGGACAGCTGCCACCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR CCA 90 bp ACCCCACACCCCAGTGGCTTTCTTCAAGCACACCCAGAACCCAGGCCTTGCGCCGCTCAGGAAAGCTGTTaGATTTCTGTCAGTCTGAAC +
Preference number: 4 (lower is better)
Translates to: TPHPSGFLQAHPEPRPCAAQESC*ISVSLN
Trigger: GTTCAGACTGACAGAAATCCAACAGCTTTCCTGAGC...GGCGCAAGGCCTGGGTTCTGGGTGTGCTTGAAGAAAGCCACTGGGGTGTGGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR CCA 90 bp GTGTGTGAACGTGCCTGTGTGCGTGTGGGGTGTGTGGTCTCTTTCTTTGTTGGACACCCCACACCCCAGTaGCTTTCTTCAAGCACACCC +
Preference number: 4 (lower is better)
Translates to: VCERACVRVGCVVSFFVGHPTPQ*LSSSTP
Trigger: GGGTGTGCTTGAAGAAAGCCACTGGGGTGTGGGGTG...TCCAACAAAGAAAGAGACCACACACCCCACACGCACACAGGCACGTTCACACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR TCA 90 bp TGGTTGTTGTTACCACACCTTGAATTGTCTCCCATTGTTCTGCCCCAGGGCCCATTGCAGTGTCATTGTTaGACCCGCTGGGCCCCAAGG +
Preference number: 4 (lower is better)
Translates to: WLLLPHLELSPIVLPQGPLQCHC*TRWAPR
Trigger: CCTTGGGGCCCAGCGGGTTCAACAATGACACTGCAA...TGGGCCCTGGGGCAGAACAATGGGAGACAATTCAAGGTGTGGTAACAACAACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR GCA 90 bp GAGGATTCCGGGGTTTCCGGCATCTTGGTAAGCCACCGGCAGCCTCCCCTCTCCACCTTTAGTCTGTGGTaGAAGTTTAACTTTTGGGGT +
Preference number: 4 (lower is better)
Translates to: EDSGVSGILVSHRQPPLSTFSLW*KFNFWG
Trigger: ACCCCAAAAGTTAAACTTGCACCACAGACTAAAGGT...GGAGAGGGGAGGCTGCCGGTGGCTTACCAAGATGCCGGAAACCCCGGAATCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR GCA 90 bp CCACCTTTCCATCACAGAGACCCCCTGCAGCTCACTGGGACCTTCCGCTACTCCCTCAACCTCAGGAAATaGCGGTGTCAAGAAAAATGC +
Preference number: 4 (lower is better)
Translates to: PPFHHRDPLQLTGTFRYSLNLRK*RCQEKC
Trigger: GCATTTTTCTTGACACCGGCATTTCCTGAGGTTGAG...GGAGTAGCGGAAGGTCCCAGTGAGCTGCAGGGGGTCTCTGTGATGGAAAGGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR GCA 90 bp GAAATTTCCAGCTCAGGAAAGCTGTTGGATTTCTGTCAGTCTGAACTGGCCCTTGGGCAGCAACGCCCTTaGAGTTCCGGTCCTGGCTCC +
Preference number: 4 (lower is better)
Translates to: EISSSGKLLDFCQSELALGQQRP*SSGPGS
Trigger: GGAGCCAGGACCGGAACTGCAAGGGCGTTGCTGCCC...AAGGGCCAGTTCAGACTGACAGAAATCCAACAGCTTTCCTGAGCTGGAAATTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR CCA 90 bp GTGTGTGAACGTGCCTGTGTGCGTGTGGGGTGTGTGGTCTCTTTCTTTGTTGGACACCCAACCGACTTCTaGTTCTCGGGAGAGTGTGTG +
Preference number: 4 (lower is better)
Translates to: VCERACVRVGCVVSFFVGHPTDF*FSGECV
Trigger: CACACACTCTCCCGAGAACCAGAAGTCGGTTGGGTG...TCCAACAAAGAAAGAGACCACACACCCCACACGCACACAGGCACGTTCACACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR CCA 90 bp GAAATTTCCAGCTCAGGAAAGCTGTTGGATTTCTGTCAGTCTGAACTGGCCCTTTGTCGGAGTTGTAGGTaGCGGTGGGCGTGGTGGCGG +
Preference number: 4 (lower is better)
Translates to: EISSSGKLLDFCQSELALCRSCR*RWAWWR
Trigger: CCGCCACCACGCCCACCGCCACCTACAACTCCGACA...AAGGGCCAGTTCAGACTGACAGAAATCCAACAGCTTTCCTGAGCTGGAAATTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR CCA 90 bp GCAGCTGTCCTGGTCATCCCTGGCATATCCTCGGGGCAGGTGGCAGATCTTAAGTGCGTGTGGGGTGTGTaGTCTCTTTCTTTGTTGGAT +
Preference number: 4 (lower is better)
Translates to: AAVLVIPGISSGQVADLKCVWGV*SLSLLD
Trigger: ATCCAACAAAGAAAGAGACCACACACCCCACACGCA...CTTAAGATCTGCCACCTGCCCCGAGGATATGCCAGGGATGACCAGGACAGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR CCA 90 bp GGCATCAGTGAGTCCAAGGACCCCCAAAGGGTCAATGAACCCCCTTCCCAGGGGCCTTTAGTGCTTCTCTaGGTCAATCCACATGCTTAC +
Preference number: 4 (lower is better)
Translates to: GISESKDPQRVNEPPSQGPLVLL*VNPHAY
Trigger: GTAAGCATGTGGATTGACCCAGAGAAGCACTAAAGG...CCCCTGGGAAGGGGGTTCATTGACCCTTTGGGGGTCCTTGGACTCACTGATGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR CCA 90 bp GGATTCTGTCTTCCCCCATTCGCAGCACCTTCCTTGTCTGAGGAAGCCACCTTTTGGTGGCAGCTGTCCTaGTCATCCCTGGCATATCCT +
Preference number: 4 (lower is better)
Translates to: GFCLPPFAAPSLSEEATFWWQLS*SSLAYP
Trigger: AGGATATGCCAGGGATGACCAGGACAGCTGCCACCA...AAAGGTGGCTTCCTCAGACAAGGAAGGTGCTGCGAATGGGGGAAGACAGAATCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR CCA 90 bp GGCATCAGTGAGTCCAAGGACCCCCAAAGGGTCAATGAACCCCCTTCCCAGGGGGTTAGTTTCTTGAACTaGTCTGAGCTGGACATGAGC +
Preference number: 4 (lower is better)
Translates to: GISESKDPQRVNEPPSQGVSFLN*SELDMS
Trigger: GCTCATGTCCAGCTCAGACCAGTTCAAGAAACTAAC...CCCCTGGGAAGGGGGTTCATTGACCCTTTGGGGGTCCTTGGACTCACTGATGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000300105.7
3UTR CAA 72 bp CCTGTGTGCGTGTGGGGTGTGTGGTCTCTTTCTTTGTaGGATTCTGTCTTCCCCCATTCGCAGCACCTTCCT +
Preference number: 4 (lower is better)
Translates to: PVCVWGVWSLSL*DSVFPHSQHLP
Trigger: AGGAAGGTGCTGCGAATGGGGGAAGACAGAATCCAACAAAGAAAGAGACCACACACCCCACACGCACACAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300105.7
3UTR CAA 72 bp CTTGGTTGTTGTTACCACACCTTGAATTGTCTCCCATaGTTCTGCCCCAGGGCCCATGACCTCCCCCTGTAC +
Preference number: 4 (lower is better)
Translates to: LGCCYHTLNCLP*FCPRAHDLPLY
Trigger: GTACAGGGGGAGGTCATGGGCCCTGGGGCAGAACAATGGGAGACAATTCAAGGTGTGGTAACAACAACCAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR TCA 90 bp CTTCCTTGTCTGAGGAAGCCACCTTTCCATCACAGAGACCCCCTGCAGCTCACTAACACAGGATGCCCTTaGCCTTTAGTCTGTGGTGCA +
Preference number: 4 (lower is better)
Translates to: LPCLRKPPFHHRDPLQLTNTGCP*PLVCGA
Trigger: TGCACCACAGACTAAAGGTCAAGGGCATCCTGTGTT...AGTGAGCTGCAGGGGGTCTCTGTGATGGAAAGGTGGCTTCCTCAGACAAGGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR GCA 90 bp TGGTTGTTGTTACCACACCTTGAATTGTCTCCCATTGTTCTGCCCCAGGGCCCACTTCGTTCTCGGCTCTaGGGCCTGCGCCATGAAAAT +
Preference number: 4 (lower is better)
Translates to: WLLLPHLELSPIVLPQGPLRSRL*GLRHEN
Trigger: ATTTTCATGGCGCAGGCCGCAGAGCCGAGAACGAAG...TGGGCCCTGGGGCAGAACAATGGGAGACAATTCAAGGTGTGGTAACAACAACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR GCA 90 bp TGGTTGTTGTTACCACACCTTGAATTGTCTCCCATTGTTCTGCCCCAGGGCCCAGGCCCAGAGAGGCCATaGAGCAAGGAATTCCGGAAT +
Preference number: 4 (lower is better)
Translates to: WLLLPHLELSPIVLPQGPGPERP*SKEFRN
Trigger: ATTCCGGAATTCCTTGCTGCATGGCCTCTCTGGGCC...TGGGCCCTGGGGCAGAACAATGGGAGACAATTCAAGGTGTGGTAACAACAACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR GCA 90 bp GGCCATGCAGCAAGGAATTCCGGAATCCAGTCCTGGATTCTAGACGGGTGCCCTTTTCTCTTCAGACAGTaGTCGCTTGGGTGCGGTTTT +
Preference number: 4 (lower is better)
Translates to: GHAARNSGIQSWILDGCPFLFRQ*SLGCGF
Trigger: AAAACCGCACCCAAGCGAGCACTGTCTGAAGAGAAA...AGGGCACCCGTCTAGAATCCAGGACTGGATTCCGGAATTCCTTGCTGCATGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR CCA 90 bp TGGTTGTTGTTACCACACCTTGAATTGTCTCCCATTGTTCTGCCCCAGGGCCCAGTAGTGTTGGCGAAGTaGGGGAGAGAGGGGGTTTCT +
Preference number: 4 (lower is better)
Translates to: WLLLPHLELSPIVLPQGPVVLAK*GREGVS
Trigger: AGAAACCCCCTCTCTCCCCCACTTCGCCAACACTAC...TGGGCCCTGGGGCAGAACAATGGGAGACAATTCAAGGTGTGGTAACAACAACCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR CCA 90 bp GAAATTTCCAGCTCAGGAAAGCTGTTGGATTTCTGTCAGTCTGAACTGGCCCTTCCCTTCCCAGGGGACTaGGGGGCTTATGAGTCAGGG +
Preference number: 4 (lower is better)
Translates to: EISSSGKLLDFCQSELALPFPGD*GAYESG
Trigger: CCCTGACTCATAAGCCCCCCAGTCCCCTGGGAAGGG...AAGGGCCAGTTCAGACTGACAGAAATCCAACAGCTTTCCTGAGCTGGAAATTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR CCA 90 bp CTTTCCATCACAGAGACCCCCTGCAGCTCACTGGGACCTTCCGCTACTCCCTCCTGCAAGTTTAACTTTTaGGGTTGGTCCTTACACTGG +
Preference number: 4 (lower is better)
Translates to: LSITETPCSSLGPSATPSCKFNF*GWSLHW
Trigger: CCAGTGTAAGGACCAACCCCAAAAGTTAAACTTGCA...GGAGGGAGTAGCGGAAGGTCCCAGTGAGCTGCAGGGGGTCTCTGTGATGGAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300105.7
3UTR CAA 72 bp ACAAAGGCCAGTGTGGAGTTGTTGTCGTCCATGGCTTaGGAGGGCATGAGTCAATTTCCTTTGAGCCACGCC +
Preference number: 4 (lower is better)
Translates to: TKASVELLSSMA*EGMSQFPLSHA
Trigger: GGCGTGGCTCAAAGGAAATTGACTCATGCCCTCCAAAGCCATGGACGACAACAACTCCACACTGGCCTTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR TCA 90 bp GGCATCAGTGAGTCCAAGGACCCCCAAAGGGTCAATGAACCCCCTTCCCAGGGGTGGTTTCATTCTCACTaGCACTTTTGGTCTTGCAAA +
Preference number: 4 (lower is better)
Translates to: GISESKDPQRVNEPPSQGWFHSH*HFWSCK
Trigger: TTTGCAAGACCAAAAGTGTCAGTGAGAATGAAACCA...CCCCTGGGAAGGGGGTTCATTGACCCTTTGGGGGTCCTTGGACTCACTGATGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR TCA 90 bp CTTCCTTGTCTGAGGAAGCCACCTTTCCATCACAGAGACCCCCTGCAGCTCACTGCATCCTCTGGGAAGTaGTCAATTTGCTTGCACAGA +
Preference number: 4 (lower is better)
Translates to: LPCLRKPPFHHRDPLQLTASSGK*SICLHR
Trigger: TCTGTGCAAGCAAATTGATCACTTCCCAGAGGATGC...AGTGAGCTGCAGGGGGTCTCTGTGATGGAAAGGTGGCTTCCTCAGACAAGGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR TCA 90 bp GCAGCTGTCCTGGTCATCCCTGGCATATCCTCGGGGCAGGTGGCAGATCTTAAGACTTGCAGACTGTTCTaGAATTTCCAGCTCAGGAAA +
Preference number: 4 (lower is better)
Translates to: AAVLVIPGISSGQVADLKTCRLF*NFQLRK
Trigger: TTTCCTGAGCTGGAAATTTCAGAACAGTCTGCAAGT...CTTAAGATCTGCCACCTGCCCCGAGGATATGCCAGGGATGACCAGGACAGCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR GCA 90 bp GGCCATGCAGCAAGGAATTCCGGAATCCAGTCCTGGATTCTAGACGGGTGCCCTGCCATGAAAATCCTTTaGTTCGCCAGTTCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: GHAARNSGIQSWILDGCPAMKIL*FASSLP
Trigger: AGGAAGAGAACTGGCGAAGCAAAGGATTTTCATGGC...AGGGCACCCGTCTAGAATCCAGGACTGGATTCCGGAATTCCTTGCTGCATGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR GCA 90 bp TGGGGGCAGGTGTTCGGGGAGCACAGTGAGGAGGTATATGGTGTGTGTGTGTGTCCGGAGGAAATATTCTaGTGTGTCAGCTTCGTAATC +
Preference number: 4 (lower is better)
Translates to: WGQVFGEHSEEVYGVCVCPEEIF*CVSFVI
Trigger: GATTACGAAGCTGACACAGCAGAATATTTCCTCCGG...ACACACACACACACCATATACCTCCTCACTGTGCTCCCCGAACACCTGCCCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR CCA 90 bp TGGGGGCAGGTGTTCGGGGAGCACAGTGAGGAGGTATATGGTGTGTGTGTGTGTCTCCATAATCCGGAATaGGTCATAACTTCCTCGTTC +
Preference number: 4 (lower is better)
Translates to: WGQVFGEHSEEVYGVCVCLHNPE*VITSSF
Trigger: GAACGAGGAAGTTATGACCCATTCCGGATTATGGAG...ACACACACACACACCATATACCTCCTCACTGTGCTCCCCGAACACCTGCCCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR CCA 90 bp GAAATTTCCAGCTCAGGAAAGCTGTTGGATTTCTGTCAGTCTGAACTGGCCCTTGGATTGGGAAAATGCTaGAGGCCCTCACGGCCCGGA +
Preference number: 4 (lower is better)
Translates to: EISSSGKLLDFCQSELALGLGKC*RPSRPG
Trigger: TCCGGGCCGTGAGGGCCTCCAGCATTTTCCCAATCC...AAGGGCCAGTTCAGACTGACAGAAATCCAACAGCTTTCCTGAGCTGGAAATTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR CCA 90 bp TTCTTCAAGCACACCCAGAACCCAGGCCTTGCGCCATGGAAAGAAGCACTGATCCAGTGCTGGGCTAAGTaGACTGTGTATGTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: FFKHTQNPGLAPWKEALIQCWAK*TVYVCV
Trigger: CACACACACATACACAGTCCACTTAGCCCAGCACTG...GATCAGTGCTTCTTTCCATGGCGCAAGGCCTGGGTTCTGGGTGTGCTTGAAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR TCA 90 bp GGCCATGCAGCAAGGAATTCCGGAATCCAGTCCTGGATTCTAGACGGGTGCCCTGTGGTTAAAAGCATTTaGACACCTCGATCAAACAGC +
Preference number: 4 (lower is better)
Translates to: GHAARNSGIQSWILDGCPVVKSI*TPRSNS
Trigger: GCTGTTTGATCGAGGTGTTCAAATGCTTTTAACCAC...AGGGCACCCGTCTAGAATCCAGGACTGGATTCCGGAATTCCTTGCTGCATGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR TCA 90 bp CAATTTCCTTTGAGCCACGCCCCTGGCCGTGTATGGGATGGAAGGGTTGAGACTTTTCTTGAACTGGTCTaGGCTGGACATGAGCAATCA +
Preference number: 4 (lower is better)
Translates to: QFPLSHAPGRVWDGRVETFLELV*AGHEQS
Trigger: TGATTGCTCATGTCCAGCTCAGACCAGTTCAAGAAA...AGTCTCAACCCTTCCATCCCATACACGGCCAGGGGCGTGGCTCAAAGGAAATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR GCA 90 bp GGCAGGTGTTCGGGGAGCACAGTGAGGAGGTATATGGTGTGTGTGTGTGTGTGTACACGGGAAGAGGCTTaGCTTTTGAGATCAGAAACT +
Preference number: 4 (lower is better)
Translates to: GRCSGSTVRRYMVCVCVCTREEA*LLRSET
Trigger: AGTTTCTGATCTCAAAAGGCAAGCCTCTTCCCGTGT...ACACACACACACACACACCATATACCTCCTCACTGTGCTCCCCGAACACCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR GCA 90 bp GAAATTTCCAGCTCAGGAAAGCTGTTGGATTTCTGTCAGTCTGAACTGGCCCTTGTGAACGTGCCTGTGTaGGTGTGGGGTGTGTGGTCT +
Preference number: 4 (lower is better)
Translates to: EISSSGKLLDFCQSELALVNVPV*VWGVWS
Trigger: AGACCACACACCCCACACGCACACAGGCACGTTCAC...AAGGGCCAGTTCAGACTGACAGAAATCCAACAGCTTTCCTGAGCTGGAAATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR CCA 90 bp TGGGGGCAGGTGTTCGGGGAGCACAGTGAGGAGGTATATGGTGTGTGTGTGTGTCGAAAGCACCAACGGTaGTTAAAAGCATTTGAACAC +
Preference number: 4 (lower is better)
Translates to: WGQVFGEHSEEVYGVCVCRKHQR*LKAFEH
Trigger: GTGTTCAAATGCTTTTAACCACCGTTGGTGCTTTCG...ACACACACACACACCATATACCTCCTCACTGTGCTCCCCGAACACCTGCCCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR CCA 90 bp TGGTTGTTGTTACCACACCTTGAATTGTCTCCCATTGTTCTGCCCCAGGGCCCATATCCTCGGGGCAGGTaGCAGATCTTAAGTCACAGA +
Preference number: 4 (lower is better)
Translates to: WLLLPHLELSPIVLPQGPYPRGR*QILSHR
Trigger: TCTGTGACTTAAGATCTGCCACCTGCCCCGAGGATA...TGGGCCCTGGGGCAGAACAATGGGAGACAATTCAAGGTGTGGTAACAACAACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR CCA 90 bp GGTGCAAGTTTAACTTTTGGGGTTGGTCCTTACACTGGGATGGAACTGCTAAAACCTGTACTTCTGGGCTaGGCTGGCCGATGTTCTGCC +
Preference number: 4 (lower is better)
Translates to: GASLTFGVGPYTGMELLKPVLLG*AGRCSA
Trigger: GGCAGAACATCGGCCAGCCCAGCCCAGAAGTACAGG...TTTTAGCAGTTCCATCCCAGTGTAAGGACCAACCCCAAAAGTTAAACTTGCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR TCA 90 bp GGATTCTGTCTTCCCCCATTCGCAGCACCTTCCTTGTCTGAGGAAGCCACCTTTTGTGTATTTTTGCTTTaGCATTGGATGTGGGGGCAG +
Preference number: 4 (lower is better)
Translates to: GFCLPPFAAPSLSEEATFCVFLL*HWMWGQ
Trigger: CTGCCCCCACATCCAATGTCAAAGCAAAAATACACA...AAAGGTGGCTTCCTCAGACAAGGAAGGTGCTGCGAATGGGGGAAGACAGAATCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR TCA 90 bp CCCCATTCGCAGCACCTTCCTTGTCTGAGGAAGCCACCTTTCCATCACAGAGACGTTGTTACCACACCTTaGATTGTCTCCCATTGTTCT +
Preference number: 4 (lower is better)
Translates to: PHSQHLPCLRKPPFHHRDVVTTP*IVSHCS
Trigger: AGAACAATGGGAGACAATTCAAGGTGTGGTAACAAC...GTCTCTGTGATGGAAAGGTGGCTTCCTCAGACAAGGAAGGTGCTGCGAATGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR GCA 90 bp GAAATTTCCAGCTCAGGAAAGCTGTTGGATTTCTGTCAGTCTGAACTGGCCCTTGCCCGCAGCTGTTTGTaGCGGTCGATAAACATGTGC +
Preference number: 4 (lower is better)
Translates to: EISSSGKLLDFCQSELALARSCL*RSINMC
Trigger: GCACATGTTTATCGACCGGCACAAACAGCTGCGGGC...AAGGGCCAGTTCAGACTGACAGAAATCCAACAGCTTTCCTGAGCTGGAAATTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR GCA 90 bp GAAATTTCCAGCTCAGGAAAGCTGTTGGATTTCTGTCAGTCTGAACTGGCCCTTCCTTCCCAGACGCTCTaGCAGAATTCGGAGAACTGG +
Preference number: 4 (lower is better)
Translates to: EISSSGKLLDFCQSELALPSQTL*QNSENW
Trigger: CCAGTTCTCCGAATTCTGGCAGAGCGTCTGGGAAGG...AAGGGCCAGTTCAGACTGACAGAAATCCAACAGCTTTCCTGAGCTGGAAATTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR CCA 90 bp GAAATTTCCAGCTCAGGAAAGCTGTTGGATTTCTGTCAGTCTGAACTGGCCCTTCAGACAGTGCTCGCTTaGGTGCGGTTTTCTTGGGGA +
Preference number: 4 (lower is better)
Translates to: EISSSGKLLDFCQSELALQTVLA*VRFSWG
Trigger: TCCCCAAGAAAACCGCACCCAAGCGAGCACTGTCTG...AAGGGCCAGTTCAGACTGACAGAAATCCAACAGCTTTCCTGAGCTGGAAATTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR TCA 90 bp GTGTGTGAACGTGCCTGTGTGCGTGTGGGGTGTGTGGTCTCTTTCTTTGTTGGAGAAGGACCAGCCGTATaGGTAACTATTCTTTTTGGA +
Preference number: 4 (lower is better)
Translates to: VCERACVRVGCVVSFFVGEGPAV*VTILFG
Trigger: TCCAAAAAGAATAGTTACTCATACGGCTGGTCCTTC...TCCAACAAAGAAAGAGACCACACACCCCACACGCACACAGGCACGTTCACACAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR GCA 90 bp TGGGGGCAGGTGTTCGGGGAGCACAGTGAGGAGGTATATGGTGTGTGTGTGTGTACATGTGTGTATTTTTaGTTTGACATTGGATGTGGG +
Preference number: 4 (lower is better)
Translates to: WGQVFGEHSEEVYGVCVCTCVYF*FDIGCG
Trigger: CCCACATCCAATGTCAAAGCAAAAATACACACATGT...ACACACACACACACCATATACCTCCTCACTGTGCTCCCCGAACACCTGCCCCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR CCA 90 bp GTGTGTGAACGTGCCTGTGTGCGTGTGGGGTGTGTGGTCTCTTTCTTTGTTGGAATGTGTATGCTCTGTTaGGAGGTTGTGAATGAACAC +
Preference number: 4 (lower is better)
Translates to: VCERACVRVGCVVSFFVGMCMLC*EVVNEH
Trigger: GTGTTCATTCACAACCTCCCAACAGAGCATACACAT...TCCAACAAAGAAAGAGACCACACACCCCACACGCACACAGGCACGTTCACACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR CCA 90 bp GAAATTTCCAGCTCAGGAAAGCTGTTGGATTTCTGTCAGTCTGAACTGGCCCTTTCTGTCAGTCTGAACTaGCCCTTGTCACTCTGGGGA +
Preference number: 4 (lower is better)
Translates to: EISSSGKLLDFCQSELALSVSLN*PLSLWG
Trigger: TCCCCAGAGTGACAAGGGCCAGTTCAGACTGACAGA...AAGGGCCAGTTCAGACTGACAGAAATCCAACAGCTTTCCTGAGCTGGAAATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR GCA 90 bp GGTGCAAGTTTAACTTTTGGGGTTGGTCCTTACACTGGGATGGAACTGCTAAAACGGTGTCAAGAAAAATaGAAACCGGGGGAGACTCGC +
Preference number: 4 (lower is better)
Translates to: GASLTFGVGPYTGMELLKRCQEK*KPGETR
Trigger: GCGAGTCTCCCCCGGTTTGCATTTTTCTTGACACCG...TTTTAGCAGTTCCATCCCAGTGTAAGGACCAACCCCAAAAGTTAAACTTGCACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR CCA 90 bp GAAATTTCCAGCTCAGGAAAGCTGTTGGATTTCTGTCAGTCTGAACTGGCCCTTTCTTGCAAACCCCTCTaGAGTAGAGCCAATAGTCGG +
Preference number: 4 (lower is better)
Translates to: EISSSGKLLDFCQSELALSCKPL*SRANSR
Trigger: CCGACTATTGGCTCTACTCCAGAGGGGTTTGCAAGA...AAGGGCCAGTTCAGACTGACAGAAATCCAACAGCTTTCCTGAGCTGGAAATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR CCA 90 bp GAAATTTCCAGCTCAGGAAAGCTGTTGGATTTCTGTCAGTCTGAACTGGCCCTTACACAAAGGCCAGTGTaGAGTTGTTGTCGTCCATGG +
Preference number: 4 (lower is better)
Translates to: EISSSGKLLDFCQSELALTQRPV*SCCRPW
Trigger: CCATGGACGACAACAACTCCACACTGGCCTTTGTGT...AAGGGCCAGTTCAGACTGACAGAAATCCAACAGCTTTCCTGAGCTGGAAATTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR CCA 90 bp TGGTTGTTGTTACCACACCTTGAATTGTCTCCCATTGTTCTGCCCCAGGGCCCATTTAACTTTTGGGGTTaGTCCTTACACTGGGATGGA +
Preference number: 4 (lower is better)
Translates to: WLLLPHLELSPIVLPQGPFNFWG*SLHWDG
Trigger: TCCATCCCAGTGTAAGGACCAACCCCAAAAGTTAAA...TGGGCCCTGGGGCAGAACAATGGGAGACAATTCAAGGTGTGGTAACAACAACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR CCA 90 bp CCCCATTCGCAGCACCTTCCTTGTCTGAGGAAGCCACCTTTCCATCACAGAGACTTGACCTTTAGTCTGTaGTGCAAGTTTAACTTTTGG +
Preference number: 4 (lower is better)
Translates to: PHSQHLPCLRKPPFHHRDLTFSL*CKFNFW
Trigger: CCAAAAGTTAAACTTGCACCACAGACTAAAGGTCAA...GTCTCTGTGATGGAAAGGTGGCTTCCTCAGACAAGGAAGGTGCTGCGAATGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR TCA 90 bp GGTGCAAGTTTAACTTTTGGGGTTGGTCCTTACACTGGGATGGAACTGCTAAAATGCCGGCACTCAGGATaGTGTTGTGTCGAGTTTTGT +
Preference number: 4 (lower is better)
Translates to: GASLTFGVGPYTGMELLKCRHSG*CCVEFC
Trigger: ACAAAACTCGACACAACATCATCCTGAGTGCCGGCA...TTTTAGCAGTTCCATCCCAGTGTAAGGACCAACCCCAAAAGTTAAACTTGCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR TCA 90 bp GGTGCAAGTTTAACTTTTGGGGTTGGTCCTTACACTGGGATGGAACTGCTAAAATTGGGAGGTTGTGAATaGACACAAAGGCCAGTGTGG +
Preference number: 4 (lower is better)
Translates to: GASLTFGVGPYTGMELLKLGGCE*TQRPVW
Trigger: CCACACTGGCCTTTGTGTTCATTCACAACCTCCCAA...TTTTAGCAGTTCCATCCCAGTGTAAGGACCAACCCCAAAAGTTAAACTTGCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR GCA 90 bp CCCCATTCGCAGCACCTTCCTTGTCTGAGGAAGCCACCTTTCCATCACAGAGACCTCTCACAACGGTTTTaGTTTGTTTTTGTAAATGGA +
Preference number: 4 (lower is better)
Translates to: PHSQHLPCLRKPPFHHRDLSQRF*FVFVNG
Trigger: TCCATTTACAAAAACAAAGCAAAACCGTTGTGAGAG...GTCTCTGTGATGGAAAGGTGGCTTCCTCAGACAAGGAAGGTGCTGCGAATGGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000300105.7
3UTR CAA 72 bp GCAGACTGTTCTGAAATTTCCAGCTCAGGAAAGCTGTaGGATTTCTGTCAGTCTGAACTGGCCCTTGTCACT +
Preference number: 4 (lower is better)
Translates to: ADCSEISSSGKL*DFCQSELALVT
Trigger: AGTGACAAGGGCCAGTTCAGACTGACAGAAATCCAACAGCTTTCCTGAGCTGGAAATTTCAGAACAGTCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300105.7
3UTR CAA 72 bp GTTCAGTTTCTGCCCAGACTGAGGGCAACTTGGTTGTaGTTACCACACCTTGAATTGTCTCCCATTGTTCTG +
Preference number: 4 (lower is better)
Translates to: VQFLPRLRATWL*LPHLELSPIVL
Trigger: CAGAACAATGGGAGACAATTCAAGGTGTGGTAACAACAACCAAGTTGCCCTCAGTCTGGGCAGAAACTGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR CCA 90 bp GAAATTTCCAGCTCAGGAAAGCTGTTGGATTTCTGTCAGTCTGAACTGGCCCTTCAACACCATTTCTCATaGTCGGGACCTAGACAGTTA +
Preference number: 4 (lower is better)
Translates to: EISSSGKLLDFCQSELALQHHFS*SGPRQL
Trigger: TAACTGTCTAGGTCCCGACCATGAGAAATGGTGTTG...AAGGGCCAGTTCAGACTGACAGAAATCCAACAGCTTTCCTGAGCTGGAAATTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300105.7
3UTR CAA 72 bp AGAGTTCAGTTTCTGCCCAGACTGAGGGCAACTTGGTaGTTGTTACCACACCTTGAATTGTCTCCCATTGTT +
Preference number: 4 (lower is better)
Translates to: RVQFLPRLRATW*LLPHLELSPIV
Trigger: AACAATGGGAGACAATTCAAGGTGTGGTAACAACAACCAAGTTGCCCTCAGTCTGGGCAGAAACTGAACTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR TCA 90 bp GGTGCAAGTTTAACTTTTGGGGTTGGTCCTTACACTGGGATGGAACTGCTAAAAAAGAGGCTTGCCTTTTaGGATCAGAAACTGTTCCAG +
Preference number: 4 (lower is better)
Translates to: GASLTFGVGPYTGMELLKKRLAF*DQKLFQ
Trigger: CTGGAACAGTTTCTGATCTCAAAAGGCAAGCCTCTT...TTTTAGCAGTTCCATCCCAGTGTAAGGACCAACCCCAAAAGTTAAACTTGCACC
44% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR CCA 90 bp GAAATTTCCAGCTCAGGAAAGCTGTTGGATTTCTGTCAGTCTGAACTGGCCCTTAGTAACTATTCTTTTTaGAGTCGCTCTTGGAGGGGT +
Preference number: 4 (lower is better)
Translates to: EISSSGKLLDFCQSELALSNYSF*SRSWRG
Trigger: ACCCCTCCAAGAGCGACTCCAAAAAGAATAGTTACT...AAGGGCCAGTTCAGACTGACAGAAATCCAACAGCTTTCCTGAGCTGGAAATTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR CCA 90 bp GAAATTTCCAGCTCAGGAAAGCTGTTGGATTTCTGTCAGTCTGAACTGGCCCTTGGTTGGTCCTTACACTaGGATGGAACTGCTAAAATT +
Preference number: 4 (lower is better)
Translates to: EISSSGKLLDFCQSELALGWSLH*DGTAKI
Trigger: AATTTTAGCAGTTCCATCCCAGTGTAAGGACCAACC...AAGGGCCAGTTCAGACTGACAGAAATCCAACAGCTTTCCTGAGCTGGAAATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS GCA 90 bp GGAAACGAGGGAGCCGGCGTCTTGCTGCAGGGTGGGCCGCGCGCCTaGCCCCCACTCGCTACCGGCTGGGCGCCCGCGGAGGCGCTCCCA +
Preference number: 5 (lower is better)
Translates to: GNEGAGVLLQGGPRA*PPLATGWAPAEALP
Trigger: TGGGAGCGCCTCCGCGGGCGCCCAGCCGGTAGCGAGTGGGGGGCAGGCGCGCGGCCCACCCTGCAGCAAGACGCCGGCTCCCTCGTTTCC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS GCA 90 bp TTGAGCTCAGCTGCACAGGTGCGGGGGTCTCGCTTTCCATGGTTTTaGCCGGGCAGCGGCGGCGGCGGCGGCGGCGGCGGCAGGGCGGGC +
Preference number: 5 (lower is better)
Translates to: LSSAAQVRGSRFPWF*PGSGGGGGGGGRAG
Trigger: GCCCGCCCTGCCGCCGCCGCCGCCGCCGCCGCCGCTGCCCGGGCAAAACCATGGAAAGCGAGACCCCCGCACCTGTGCAGCTGAGCTCAA
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS TCA 90 bp AGCGGCTGCGGCGCTGGTAGCGGTAGCGGTAGCTGGGGATGCGGGTaGTGGCAGAGGCCTGGAGGTAGTCCGTGGCGCGGGCCGTGGCCC +
Preference number: 5 (lower is better)
Translates to: SGCGAGSGSGSWGCG*WQRPGGSPWRGPWP
Trigger: GGGCCACGGCCCGCGCCACGGACTACCTCCAGGCCTCTGCCATCACCCGCATCCCCAGCTACCGCTACCGCTACCAGCGCCGCAGCCGCT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS GCA 90 bp CCCACTCGCTACCGGCTGGGCGCCCGCGGAGGCGCTCCCACCTACTaGATTACGGGTGGTGCTGAACCGGACAGCTCCCTGCGCCGCCCG +
Preference number: 5 (lower is better)
Translates to: PTRYRLGARGGAPTY*ITGGAEPDSSLRRP
Trigger: CGGGCGGCGCAGGGAGCTGTCCGGTTCAGCACCACCCGTAATGCAGTAGGTGGGAGCGCCTCCGCGGGCGCCCAGCCGGTAGCGAGTGGG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS CCA 90 bp AAGCCCTTGAGCTCAGCTGCACAGGTGCGGGGGTCTCGCTTTCCATaGTTTTGCCCGGGCAGCGGCGGCGGCGGCGGCGGCGGCGGCAGG +
Preference number: 5 (lower is better)
Translates to: KPLSSAAQVRGSRFP*FCPGSGGGGGGGGR
Trigger: CCTGCCGCCGCCGCCGCCGCCGCCGCCGCTGCCCGGGCAAAACCATGGAAAGCGAGACCCCCGCACCTGTGCAGCTGAGCTCAAGGGCTT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS GCA 90 bp GCGCGGGCCGTGGCCCGCAGCTGTTTGTGCCGGTCGATAAACATGTaGACCGCCAGCACCCCGACCATCTCGGCGATGATGAAGGACAGG +
Preference number: 5 (lower is better)
Translates to: ARAVARSCLCRSINM*TASTPTISAMMKDR
Trigger: CCTGTCCTTCATCATCGCCGAGATGGTCGGGGTGCTGGCGGTGCACATGTTTATCGACCGGCACAAACAGCTGCGGGCCACGGCCCGCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS CCA 90 bp CTGGAGAATCGAGGCGGATTTCCCTCCCCCTATCTGCAAAGCTCCTaGAAACGAGGGAGCCGGCGTCTTGCTGCAGGGTGGGCCGCGCGC +
Preference number: 5 (lower is better)
Translates to: LENRGGFPSPYLQSS*KRGSRRLAAGWAAR
Trigger: GCGCGCGGCCCACCCTGCAGCAAGACGCCGGCTCCCTCGTTTCCAGGAGCTTTGCAGATAGGGGGAGGGAAATCCGCCTCGATTCTCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR CAA 90 bp TGGGGGCAGGTGTTCGGGGAGCACAGTGAGGAGGTATATGGTGTGTGTGTGTGTGAGGGAGCCGGCGTCTaGCTGCAGGGTGGGCCGCGC +
Preference number: 5 (lower is better)
Translates to: WGQVFGEHSEEVYGVCVCEGAGV*LQGGPR
Trigger: GCGCGGCCCACCCTGCAGCAAGACGCCGGCTCCCTC...ACACACACACACACCATATACCTCCTCACTGTGCTCCCCGAACACCTGCCCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR CAA 90 bp ACCCCACACCCCAGTGGCTTTCTTCAAGCACACCCAGAACCCAGGCCTTGCGCCAGGGTGTTGAAGCCCTaGATGCCCACGGGGGAGGCG +
Preference number: 5 (lower is better)
Translates to: TPHPSGFLQAHPEPRPCARVLKP*MPTGEA
Trigger: CGCCTCCCCCGTGGGCATCAAGGGCTTCAACACCCT...GGCGCAAGGCCTGGGTTCTGGGTGTGCTTGAAGAAAGCCACTGGGGTGTGGGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS CCA 90 bp TCCTCCCGCGGTCTTCTGGCGAGGCCCGCGGTCTTTATACGGGGGTaGTCCGGCGGTTGGCTGTGTTGGAGTGGAGAGAGTCCTTGTTCT +
Preference number: 5 (lower is better)
Translates to: SSRGLLARPAVFIRG*SGGWLCWSGESPCS
Trigger: AGAACAAGGACTCTCTCCACTCCAACACAGCCAACCGCCGGACCACCCCCGTATAAAGACCGCGGGCCTCGCCAGAAGACCGCGGGAGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR CAA 90 bp CTTTCCATCACAGAGACCCCCTGCAGCTCACTGGGACCTTCCGCTACTCCCTCCGTGGCGGGGGTAGTGTaGGCGAAGTGGGGGAGAGAG +
Preference number: 5 (lower is better)
Translates to: LSITETPCSSLGPSATPSVAGVV*AKWGRE
Trigger: CTCTCTCCCCCACTTCGCCAACACTACCCCCGCCAC...GGAGGGAGTAGCGGAAGGTCCCAGTGAGCTGCAGGGGGTCTCTGTGATGGAAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR CAA 90 bp GGCATCAGTGAGTCCAAGGACCCCCAAAGGGTCAATGAACCCCCTTCCCAGGGGGGGGTGGTCCGGCGGTaGGCTGTGTTGGAGTGGAGA +
Preference number: 5 (lower is better)
Translates to: GISESKDPQRVNEPPSQGGVVRR*AVLEWR
Trigger: TCTCCACTCCAACACAGCCAACCGCCGGACCACCCC...CCCCTGGGAAGGGGGTTCATTGACCCTTTGGGGGTCCTTGGACTCACTGATGCC
63% GC, longest homopolymer 8 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR CAA 90 bp CAATGCTGGGCGGAGCCGGCTCGAGCTCTGAGCCTTCCTGGAGTTCCTGGGGCATCAGACAGTGCTCGCTaGGGTGCGGTTTTCTTGGGG +
Preference number: 5 (lower is better)
Translates to: QCWAEPARALSLPGVPGASDSAR*GAVFLG
Trigger: CCCCAAGAAAACCGCACCCAAGCGAGCACTGTCTGA...TGCCCCAGGAACTCCAGGAAGGCTCAGAGCTCGAGCCGGCTCCGCCCAGCATTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR CAA 90 bp GTCACCCCACACCCCAGTGGCTTTCTTCAAGCACACCCAGAACCCAGGCCTTGCCAGCGGCGGCGGTTATaGTTGTTGGTGGCGGGGGTA +
Preference number: 5 (lower is better)
Translates to: VTPHPSGFLQAHPEPRPCQRRRL*LLVAGV
Trigger: TACCCCCGCCACCAACAACAATAACCGCCGCCGCTG...GCAAGGCCTGGGTTCTGGGTGTGCTTGAAGAAAGCCACTGGGGTGTGGGGTGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR CAA 90 bp GGCATCAGTGAGTCCAAGGACCCCCAAAGGGTCAATGAACCCCCTTCCCAGGGGGGGGTTTCCGGCATCTaGGTAAGCCACCGGCAGCCT +
Preference number: 5 (lower is better)
Translates to: GISESKDPQRVNEPPSQGGVSGI*VSHRQP
Trigger: AGGCTGCCGGTGGCTTACCAAGATGCCGGAAACCCC...CCCCTGGGAAGGGGGTTCATTGACCCTTTGGGGGTCCTTGGACTCACTGATGCC
62% GC, longest homopolymer 8 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS GCA 90 bp GGGGGTTTCTCCTGGAGAATCGAGGCGGATTTCCCTCCCCCTATCTaGAAAGCTCCTGGAAACGAGGGAGCCGGCGTCTTGCTGCAGGGT +
Preference number: 5 (lower is better)
Translates to: GGFSWRIEADFPPPI*KAPGNEGAGVLLQG
Trigger: ACCCTGCAGCAAGACGCCGGCTCCCTCGTTTCCAGGAGCTTTGCAGATAGGGGGAGGGAAATCCGCCTCGATTCTCCAGGAGAAACCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR CAA 90 bp GGCAGGTGTTCGGGGAGCACAGTGAGGAGGTATATGGTGTGTGTGTGTGTGTGTTCGCTTTCCATGGTTTaGCCCGGGCAGCGGCGGCGG +
Preference number: 5 (lower is better)
Translates to: GRCSGSTVRRYMVCVCVCSLSMV*PGQRRR
Trigger: CCGCCGCCGCTGCCCGGGCAAAACCATGGAAAGCGA...ACACACACACACACACACCATATACCTCCTCACTGTGCTCCCCGAACACCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS CCA 90 bp CTTCTGGCGAGGCCCGCGGTCTTTATACGGGGGTGGTCCGGCGGTTaGCTGTGTTGGAGTGGAGAGAGTCCTTGTTCTCCTTCTGGATAC +
Preference number: 5 (lower is better)
Translates to: LLARPAVFIRGWSGG*LCWSGESPCSPSGY
Trigger: GTATCCAGAAGGAGAACAAGGACTCTCTCCACTCCAACACAGCCAACCGCCGGACCACCCCCGTATAAAGACCGCGGGCCTCGCCAGAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR CAA 90 bp GAGGATTCCGGGGTTTCCGGCATCTTGGTAAGCCACCGGCAGCCTCCCCTCTCCTATGGGATGGAAGGGTaGAGACTGAGTGTGTCCCTG +
Preference number: 5 (lower is better)
Translates to: EDSGVSGILVSHRQPPLSYGMEG*RLSVSL
Trigger: CAGGGACACACTCAGTCTCAACCCTTCCATCCCATA...GGAGAGGGGAGGCTGCCGGTGGCTTACCAAGATGCCGGAAACCCCGGAATCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR CAA 90 bp CCCCATTCGCAGCACCTTCCTTGTCTGAGGAAGCCACCTTTCCATCACAGAGACCGGCGGCGGTTATTGTaGTTGGTGGCGGGGGTAGTG +
Preference number: 5 (lower is better)
Translates to: PHSQHLPCLRKPPFHHRDRRRLL*LVAGVV
Trigger: CACTACCCCCGCCACCAACAACAATAACCGCCGCCG...GTCTCTGTGATGGAAAGGTGGCTTCCTCAGACAAGGAAGGTGCTGCGAATGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR CAA 90 bp CAATGCTGGGCGGAGCCGGCTCGAGCTCTGAGCCTTCCTGGAGTTCCTGGGGCATGCTTGCACAGACCTTaGAAATTCCCTTCTAGGCAG +
Preference number: 5 (lower is better)
Translates to: QCWAEPARALSLPGVPGACLHRP*KFPSRQ
Trigger: CTGCCTAGAAGGGAATTTCAAAGGTCTGTGCAAGCA...TGCCCCAGGAACTCCAGGAAGGCTCAGAGCTCGAGCCGGCTCCGCCCAGCATTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR CAA 90 bp GTCACCCCACACCCCAGTGGCTTTCTTCAAGCACACCCAGAACCCAGGCCTTGCGCCAGTGTGGAGTTGTaGTCGTCCATGGCTTTGGAG +
Preference number: 5 (lower is better)
Translates to: VTPHPSGFLQAHPEPRPCASVEL*SSMALE
Trigger: CTCCAAAGCCATGGACGACAACAACTCCACACTGGC...GCAAGGCCTGGGTTCTGGGTGTGCTTGAAGAAAGCCACTGGGGTGTGGGGTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS GCA 90 bp AGAGCCGAGATGCAACCTTCGGTCTTCGTTCTCGGCTCTGCGGCCTaGGCCATGAAAATCCTTTGCTTCGCCAGTTCTCTTCCTTGGGGG +
Preference number: 5 (lower is better)
Translates to: RAEMQPSVFVLGSAA*AMKILCFASSLPWG
Trigger: CCCCCAAGGAAGAGAACTGGCGAAGCAAAGGATTTTCATGGCGCAGGCCGCAGAGCCGAGAACGAAGACCGAAGGTTGCATCTCGGCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR CAA 90 bp GAGGATTCCGGGGTTTCCGGCATCTTGGTAAGCCACCGGCAGCCTCCCCTCTCCTTCTCACTGACACTTTaGGTCTTGCAAACCCCTCTG +
Preference number: 5 (lower is better)
Translates to: EDSGVSGILVSHRQPPLSFSLTL*VLQTPL
Trigger: CAGAGGGGTTTGCAAGACCAAAAGTGTCAGTGAGAA...GGAGAGGGGAGGCTGCCGGTGGCTTACCAAGATGCCGGAAACCCCGGAATCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR CAA 90 bp GTGTGTGAACGTGCCTGTGTGCGTGTGGGGTGTGTGGTCTCTTTCTTTGTTGGAGTGGACGGCAGGGTGTaGAAGCCCTTGATGCCCACG +
Preference number: 5 (lower is better)
Translates to: VCERACVRVGCVVSFFVGVDGRV*KPLMPT
Trigger: CGTGGGCATCAAGGGCTTCAACACCCTGCCGTCCAC...TCCAACAAAGAAAGAGACCACACACCCCACACGCACACAGGCACGTTCACACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR CAA 90 bp CTTCCTTGTCTGAGGAAGCCACCTTTCCATCACAGAGACCCCCTGCAGCTCACTTTGGGTGCGGTTTTCTaGGGGACCCTCCCTTCTCCC +
Preference number: 5 (lower is better)
Translates to: LPCLRKPPFHHRDPLQLTLGAVF*GTLPSP
Trigger: GGGAGAAGGGAGGGTCCCCAAGAAAACCGCACCCAA...AGTGAGCTGCAGGGGGTCTCTGTGATGGAAAGGTGGCTTCCTCAGACAAGGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR CAA 90 bp CCCCATTCGCAGCACCTTCCTTGTCTGAGGAAGCCACCTTTCCATCACAGAGACCCCAGAACCCAGGCCTaGCGCCATGGAAAGAAGCAC +
Preference number: 5 (lower is better)
Translates to: PHSQHLPCLRKPPFHHRDPRTQA*RHGKKH
Trigger: GTGCTTCTTTCCATGGCGCAAGGCCTGGGTTCTGGG...GTCTCTGTGATGGAAAGGTGGCTTCCTCAGACAAGGAAGGTGCTGCGAATGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS GCA 90 bp GACTGTGAGAGCCGAGATGCAACCTTCGGTCTTCGTTCTCGGCTCTaGGGCCTGCGCCATGAAAATCCTTTGCTTCGCCAGTTCTCTTCC +
Preference number: 5 (lower is better)
Translates to: DCESRDATFGLRSRL*GLRHENPLLRQFSS
Trigger: GGAAGAGAACTGGCGAAGCAAAGGATTTTCATGGCGCAGGCCGCAGAGCCGAGAACGAAGACCGAAGGTTGCATCTCGGCTCTCACAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS CCA 90 bp AGGCCCGCGGTCTTTATACGGGGGTGGTCCGGCGGTTGGCTGTGTTaGAGTGGAGAGAGTCCTTGTTCTCCTTCTGGATACAGTTGTGAA +
Preference number: 5 (lower is better)
Translates to: RPAVFIRGWSGGWLC*SGESPCSPSGYSCE
Trigger: TTCACAACTGTATCCAGAAGGAGAACAAGGACTCTCTCCACTCCAACACAGCCAACCGCCGGACCACCCCCGTATAAAGACCGCGGGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR CAA 90 bp CAATTTCCTTTGAGCCACGCCCCTGGCCGTGTATGGGATGGAAGGGTTGAGACTCGGCGGTTATTGTTGTaGGTGGCGGGGGTAGTGTTG +
Preference number: 5 (lower is better)
Translates to: QFPLSHAPGRVWDGRVETRRLLL*VAGVVL
Trigger: CAACACTACCCCCGCCACCAACAACAATAACCGCCG...AGTCTCAACCCTTCCATCCCATACACGGCCAGGGGCGTGGCTCAAAGGAAATTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR CAA 90 bp TGGGGGCAGGTGTTCGGGGAGCACAGTGAGGAGGTATATGGTGTGTGTGTGTGTTCCATTCCCTCAGCCTaGAGCCCTCCCAGTAAACCT +
Preference number: 5 (lower is better)
Translates to: WGQVFGEHSEEVYGVCVCSIPSA*SPPSKP
Trigger: AGGTTTACTGGGAGGGCTCAAGGCTGAGGGAATGGA...ACACACACACACACCATATACCTCCTCACTGTGCTCCCCGAACACCTGCCCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR CAA 90 bp CTTTCCATCACAGAGACCCCCTGCAGCTCACTGGGACCTTCCGCTACTCCCTCCAAACACAGGATGCCCTaGACCTTTAGTCTGTGGTGC +
Preference number: 5 (lower is better)
Translates to: LSITETPCSSLGPSATPSKHRMP*TFSLWC
Trigger: GCACCACAGACTAAAGGTCAAGGGCATCCTGTGTTT...GGAGGGAGTAGCGGAAGGTCCCAGTGAGCTGCAGGGGGTCTCTGTGATGGAAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS CCA 90 bp GCGGCCTGCGCCATGAAAATCCTTTGCTTCGCCAGTTCTCTTCCTTaGGGGGTCTCGGCGCTTTCGTTTCAGACCAGACTTCCCAGTATT +
Preference number: 5 (lower is better)
Translates to: AACAMKILCFASSLP*GVSALSFQTRLPSI
Trigger: AATACTGGGAAGTCTGGTCTGAAACGAAAGCGCCGAGACCCCCCAAGGAAGAGAACTGGCGAAGCAAAGGATTTTCATGGCGCAGGCCGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS CCA 90 bp TCTGGTGCCACCTTCTCTAGGGAACTCTTATGGAAGGACCTCCTCTaGTCTGGGTTAGGGGACAGGTTCCCTCAGCACCACACGATTCCT +
Preference number: 5 (lower is better)
Translates to: SGATFSRELLWKDLL*SGLGDRFPQHHTIP
Trigger: AGGAATCGTGTGGTGCTGAGGGAACCTGTCCCCTAACCCAGACCAGAGGAGGTCCTTCCATAAGAGTTCCCTAGAGAAGGTGGCACCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480002.1
CDS-3UTR CAA 90 bp TGGGGGCAGGTGTTCGGGGAGCACAGTGAGGAGGTATATGGTGTGTGTGTGTGTGTATTCTGTAAGCCCTaGAGCTCAGCTGCACAGGTG +
Preference number: 5 (lower is better)
Translates to: WGQVFGEHSEEVYGVCVCVFCKP*SSAAQV
Trigger: CACCTGTGCAGCTGAGCTCAAGGGCTTACAGAATAC...ACACACACACACACCATATACCTCCTCACTGTGCTCCCCGAACACCTGCCCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR CAA 90 bp GCAGCTGTCCTGGTCATCCCTGGCATATCCTCGGGGCAGGTGGCAGATCTTAAGCACACGGGAAGAGGCTaGCCTTTTGAGATCAGAAAC +
Preference number: 5 (lower is better)
Translates to: AAVLVIPGISSGQVADLKHTGRG*PFEIRN
Trigger: GTTTCTGATCTCAAAAGGCAAGCCTCTTCCCGTGTG...CTTAAGATCTGCCACCTGCCCCGAGGATATGCCAGGGATGACCAGGACAGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR CAA 90 bp GGCAGGTGTTCGGGGAGCACAGTGAGGAGGTATATGGTGTGTGTGTGTGTGTGTTTTTTGGAGTCGCTCTaGGAGGGGTCTCCGGCATTG +
Preference number: 5 (lower is better)
Translates to: GRCSGSTVRRYMVCVCVCFLESL*EGSPAL
Trigger: CAATGCCGGAGACCCCTCCAAGAGCGACTCCAAAAA...ACACACACACACACACACCATATACCTCCTCACTGTGCTCCCCGAACACCTGCC
56% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR CAA 90 bp TTCTTCAAGCACACCCAGAACCCAGGCCTTGCGCCATGGAAAGAAGCACTGATCGTGGCCCGCAGCTGTTaGTGCCGGTCGATAAACATG +
Preference number: 5 (lower is better)
Translates to: FFKHTQNPGLAPWKEALIVARSC*CRSINM
Trigger: CATGTTTATCGACCGGCACAAACAGCTGCGGGCCAC...GATCAGTGCTTCTTTCCATGGCGCAAGGCCTGGGTTCTGGGTGTGCTTGAAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR CAA 90 bp GGCAGGTGTTCGGGGAGCACAGTGAGGAGGTATATGGTGTGTGTGTGTGTGTGTTTTGCAGTGTCATTGTaGAACCCGCTGGGCCCCAAG +
Preference number: 5 (lower is better)
Translates to: GRCSGSTVRRYMVCVCVCFAVSL*NPLGPK
Trigger: CTTGGGGCCCAGCGGGTTCAACAATGACACTGCAAA...ACACACACACACACACACCATATACCTCCTCACTGTGCTCCCCGAACACCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR CAA 90 bp GGCAGGTGTTCGGGGAGCACAGTGAGGAGGTATATGGTGTGTGTGTGTGTGTGTCTTTTTGCAGTGTCATaGTTGAACCCGCTGGGCCCC +
Preference number: 5 (lower is better)
Translates to: GRCSGSTVRRYMVCVCVCLFAVS*LNPLGP
Trigger: GGGGCCCAGCGGGTTCAACAATGACACTGCAAAAAG...ACACACACACACACACACCATATACCTCCTCACTGTGCTCCCCGAACACCTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR CAA 90 bp GTCACCCCACACCCCAGTGGCTTTCTTCAAGCACACCCAGAACCCAGGCCTTGCCTGAGGGCAACTTGGTaGTTGTTACCACACCTTGAA +
Preference number: 5 (lower is better)
Translates to: VTPHPSGFLQAHPEPRPCLRATW*LLPHLE
Trigger: TTCAAGGTGTGGTAACAACAACCAAGTTGCCCTCAG...GCAAGGCCTGGGTTCTGGGTGTGCTTGAAGAAAGCCACTGGGGTGTGGGGTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS TCA 90 bp GGCGCTTTCGTTTCAGACCAGACTTCCCAGTATTCTGTAAGCCCTTaGGCTCAGCTGCACAGGTGCGGGGGTCTCGCTTTCCATGGTTTT +
Preference number: 5 (lower is better)
Translates to: GAFVSDQTSQYSVSP*AQLHRCGGLAFHGF
Trigger: AAAACCATGGAAAGCGAGACCCCCGCACCTGTGCAGCTGAGCTCAAGGGCTTACAGAATACTGGGAAGTCTGGTCTGAAACGAAAGCGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR CAA 90 bp TGGGGGCAGGTGTTCGGGGAGCACAGTGAGGAGGTATATGGTGTGTGTGTGTGTCGCCATGAAAATCCTTaGCTTCGCCAGTTCTCTTCC +
Preference number: 5 (lower is better)
Translates to: WGQVFGEHSEEVYGVCVCRHENP*LRQFSS
Trigger: GGAAGAGAACTGGCGAAGCAAAGGATTTTCATGGCG...ACACACACACACACCATATACCTCCTCACTGTGCTCCCCGAACACCTGCCCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR CAA 90 bp GGCAGGTGTTCGGGGAGCACAGTGAGGAGGTATATGGTGTGTGTGTGTGTGTGTAAGGCCAGTGTGGAGTaGTTGTCGTCCATGGCTTTG +
Preference number: 5 (lower is better)
Translates to: GRCSGSTVRRYMVCVCVCKASVE*LSSMAL
Trigger: CAAAGCCATGGACGACAACAACTCCACACTGGCCTT...ACACACACACACACACACCATATACCTCCTCACTGTGCTCCCCGAACACCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR CAA 90 bp GTCACCCCACACCCCAGTGGCTTTCTTCAAGCACACCCAGAACCCAGGCCTTGCAGGGCAACTTGGTTGTaGTTACCACACCTTGAATTG +
Preference number: 5 (lower is better)
Translates to: VTPHPSGFLQAHPEPRPCRATWL*LPHLEL
Trigger: CAATTCAAGGTGTGGTAACAACAACCAAGTTGCCCT...GCAAGGCCTGGGTTCTGGGTGTGCTTGAAGAAAGCCACTGGGGTGTGGGGTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR CAA 90 bp GGATTCTGTCTTCCCCCATTCGCAGCACCTTCCTTGTCTGAGGAAGCCACCTTTAGTCTGAACTGGCCCTaGTCACTCTGGGGAAGAAAG +
Preference number: 5 (lower is better)
Translates to: GFCLPPFAAPSLSEEATFSLNWP*SLWGRK
Trigger: CTTTCTTCCCCAGAGTGACAAGGGCCAGTTCAGACT...AAAGGTGGCTTCCTCAGACAAGGAAGGTGCTGCGAATGGGGGAAGACAGAATCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR CAA 90 bp GGTGCAAGTTTAACTTTTGGGGTTGGTCCTTACACTGGGATGGAACTGCTAAAATGGGCAGCAACGCCCTaGCAGTTCCGGTCCTGGCTC +
Preference number: 5 (lower is better)
Translates to: GASLTFGVGPYTGMELLKWAATP*QFRSWL
Trigger: GAGCCAGGACCGGAACTGCAAGGGCGTTGCTGCCCA...TTTTAGCAGTTCCATCCCAGTGTAAGGACCAACCCCAAAAGTTAAACTTGCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR CAA 90 bp CTTTCCATCACAGAGACCCCCTGCAGCTCACTGGGACCTTCCGCTACTCCCTCCCCTCTCACAACGGTTTaGCTTTGTTTTTGTAAATGG +
Preference number: 5 (lower is better)
Translates to: LSITETPCSSLGPSATPSPLTTV*LCFCKW
Trigger: CCATTTACAAAAACAAAGCAAAACCGTTGTGAGAGG...GGAGGGAGTAGCGGAAGGTCCCAGTGAGCTGCAGGGGGTCTCTGTGATGGAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR CAA 90 bp GGCCATGCAGCAAGGAATTCCGGAATCCAGTCCTGGATTCTAGACGGGTGCCCTTGGTCTCTTTCTTTGTaGGATTCTGTCTTCCCCCAT +
Preference number: 5 (lower is better)
Translates to: GHAARNSGIQSWILDGCPWSLSL*DSVFPH
Trigger: ATGGGGGAAGACAGAATCCAACAAAGAAAGAGACCA...AGGGCACCCGTCTAGAATCCAGGACTGGATTCCGGAATTCCTTGCTGCATGGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR CAA 90 bp GGCAGGTGTTCGGGGAGCACAGTGAGGAGGTATATGGTGTGTGTGTGTGTGTGTGTGTGGTCTCTTTCTTaGTTGGATTCTGTCTTCCCC +
Preference number: 5 (lower is better)
Translates to: GRCSGSTVRRYMVCVCVCVWSLS*LDSVFP
Trigger: GGGGAAGACAGAATCCAACAAAGAAAGAGACCACAC...ACACACACACACACACACCATATACCTCCTCACTGTGCTCCCCGAACACCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR CAA 90 bp GCAGCTGTCCTGGTCATCCCTGGCATATCCTCGGGGCAGGTGGCAGATCTTAAGTGTTGTTACCACACCTaGAATTGTCTCCCATTGTTC +
Preference number: 5 (lower is better)
Translates to: AAVLVIPGISSGQVADLKCCYHT*NCLPLF
Trigger: GAACAATGGGAGACAATTCAAGGTGTGGTAACAACA...CTTAAGATCTGCCACCTGCCCCGAGGATATGCCAGGGATGACCAGGACAGCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS GCA 90 bp GGCACTCAGGATGATGTTGTGTCGAGTTTTGTAGAACTCGCTGGCTaGGATGCAGAGGCCACCCATGAAAAGCAGAATCACACTCAGGAT +
Preference number: 5 (lower is better)
Translates to: GTQDDVVSSFVELAG*DAEATHEKQNHTQD
Trigger: ATCCTGAGTGTGATTCTGCTTTTCATGGGTGGCCTCTGCATCGCAGCCAGCGAGTTCTACAAAACTCGACACAACATCATCCTGAGTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR CAA 90 bp GCAGCTGTCCTGGTCATCCCTGGCATATCCTCGGGGCAGGTGGCAGATCTTAAGTTCCCACATTTCCTGTaGTTTTGCTTCTTTGTTCCT +
Preference number: 5 (lower is better)
Translates to: AAVLVIPGISSGQVADLKFPHFL*FCFFVP
Trigger: AGGAACAAAGAAGCAAAACAACAGGAAATGTGGGAA...CTTAAGATCTGCCACCTGCCCCGAGGATATGCCAGGGATGACCAGGACAGCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR CAA 90 bp GGATTCTGTCTTCCCCCATTCGCAGCACCTTCCTTGTCTGAGGAAGCCACCTTTGCGTCTTTCCCCTCTTaGCCTGAACAGCTTTATGTT +
Preference number: 5 (lower is better)
Translates to: GFCLPPFAAPSLSEEATFASFPS*PEQLYV
Trigger: AACATAAAGCTGTTCAGGCAAAGAGGGGAAAGACGC...AAAGGTGGCTTCCTCAGACAAGGAAGGTGCTGCGAATGGGGGAAGACAGAATCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR CAA 90 bp TGGGGGCAGGTGTTCGGGGAGCACAGTGAGGAGGTATATGGTGTGTGTGTGTGTTCACCTGGGAGTAACTaGCAGACTGTTCTGAAATTT +
Preference number: 5 (lower is better)
Translates to: WGQVFGEHSEEVYGVCVCSPGSN*QTVLKF
Trigger: AAATTTCAGAACAGTCTGCAAGTTACTCCCAGGTGA...ACACACACACACACCATATACCTCCTCACTGTGCTCCCCGAACACCTGCCCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR CAA 90 bp TTCTTCAAGCACACCCAGAACCCAGGCCTTGCGCCATGGAAAGAAGCACTGATCTTACCACACCTTGAATaGTCTCCCATTGTTCTGCCC +
Preference number: 5 (lower is better)
Translates to: FFKHTQNPGLAPWKEALILPHLE*SPIVLP
Trigger: GGGCAGAACAATGGGAGACAATTCAAGGTGTGGTAA...GATCAGTGCTTCTTTCCATGGCGCAAGGCCTGGGTTCTGGGTGTGCTTGAAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR CAA 90 bp GTGTGTGAACGTGCCTGTGTGCGTGTGGGGTGTGTGGTCTCTTTCTTTGTTGGAATGGAGGTTAGTTTCTaGAACTGGTCTGAGCTGGAC +
Preference number: 5 (lower is better)
Translates to: VCERACVRVGCVVSFFVGMEVSF*NWSELD
Trigger: GTCCAGCTCAGACCAGTTCAAGAAACTAACCTCCAT...TCCAACAAAGAAAGAGACCACACACCCCACACGCACACAGGCACGTTCACACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS TCA 90 bp TGGAGTAGAGCCAATAGTCGGTTCCCACAGCTATGGTCATCAGGCTaGAGGCAGCGAAAGCACCAACGGTGGTTAAAAGCATTTGAACAC +
Preference number: 5 (lower is better)
Translates to: WSRANSRFPQLWSSG*RQRKHQRWLKAFEH
Trigger: GTGTTCAAATGCTTTTAACCACCGTTGGTGCTTTCGCTGCCTTCAGCCTGATGACCATAGCTGTGGGAACCGACTATTGGCTCTACTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS TCA 90 bp CAAATTCCCTGCCATGGCCTTTTCTGGGTGCTTGGGGTGCAGAAATaGATGGGACATAGCTCTGCCTTCAAGAAGCTCATAGTCTCTTGG +
Preference number: 5 (lower is better)
Translates to: QIPCHGLFWVLGVQK*MGHSSAFKKLIVSW
Trigger: CCAAGAGACTATGAGCTTCTTGAAGGCAGAGCTATGTCCCATTCATTTCTGCACCCCAAGCACCCAGAAAAGGCCATGGCAGGGAATTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480002.1
CDS-3UTR CAA 90 bp CCCCATTCGCAGCACCTTCCTTGTCTGAGGAAGCCACCTTTCCATCACAGAGACTGGGAAGTGATCAATTaGCTTGCACAGACCTTTGAA +
Preference number: 5 (lower is better)
Translates to: PHSQHLPCLRKPPFHHRDWEVIN*LAQTFE
Trigger: TTCAAAGGTCTGTGCAAGCAAATTGATCACTTCCCA...GTCTCTGTGATGGAAAGGTGGCTTCCTCAGACAAGGAAGGTGCTGCGAATGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR CAA 90 bp GGATTCTGTCTTCCCCCATTCGCAGCACCTTCCTTGTCTGAGGAAGCCACCTTTTTTTTGTTTTTGCTTTaGGAAGGTCTCCCAGCGGAG +
Preference number: 5 (lower is better)
Translates to: GFCLPPFAAPSLSEEATFFLFLL*EGLPAE
Trigger: CTCCGCTGGGAGACCTTCCAAAAGCAAAAACAAAAA...AAAGGTGGCTTCCTCAGACAAGGAAGGTGCTGCGAATGGGGGAAGACAGAATCC
50% GC, longest homopolymer 8 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR CAA 90 bp GGTGCAAGTTTAACTTTTGGGGTTGGTCCTTACACTGGGATGGAACTGCTAAAACCGATGTTCTGCCCCTaGCTGACCTGGGAAAATAAC +
Preference number: 5 (lower is better)
Translates to: GASLTFGVGPYTGMELLKPMFCP*LTWENN
Trigger: GTTATTTTCCCAGGTCAGCAAGGGGCAGAACATCGG...TTTTAGCAGTTCCATCCCAGTGTAAGGACCAACCCCAAAAGTTAAACTTGCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR CAA 90 bp GAAATTTCCAGCTCAGGAAAGCTGTTGGATTTCTGTCAGTCTGAACTGGCCCTTCCTTCGCTCTCATCCTaGATCCCTTTAGGTCTGGAA +
Preference number: 5 (lower is better)
Translates to: EISSSGKLLDFCQSELALPSLSS*IPLGLE
Trigger: TTCCAGACCTAAAGGGATCAAGGATGAGAGCGAAGG...AAGGGCCAGTTCAGACTGACAGAAATCCAACAGCTTTCCTGAGCTGGAAATTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR CAA 90 bp GGTGCAAGTTTAACTTTTGGGGTTGGTCCTTACACTGGGATGGAACTGCTAAAAGAGTGGAGAGAGTCCTaGTTCTCCTTCTGGATACAG +
Preference number: 5 (lower is better)
Translates to: GASLTFGVGPYTGMELLKEWRES*FSFWIQ
Trigger: CTGTATCCAGAAGGAGAACAAGGACTCTCTCCACTC...TTTTAGCAGTTCCATCCCAGTGTAAGGACCAACCCCAAAAGTTAAACTTGCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR CAA 90 bp GAAATTTCCAGCTCAGGAAAGCTGTTGGATTTCTGTCAGTCTGAACTGGCCCTTTTGTCGTCCATGGCTTaGGAGGGCATGAGTCAATTT +
Preference number: 5 (lower is better)
Translates to: EISSSGKLLDFCQSELALLSSMA*EGMSQF
Trigger: AAATTGACTCATGCCCTCCAAAGCCATGGACGACAA...AAGGGCCAGTTCAGACTGACAGAAATCCAACAGCTTTCCTGAGCTGGAAATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR CAA 90 bp GGTGCAAGTTTAACTTTTGGGGTTGGTCCTTACACTGGGATGGAACTGCTAAAACAGACTGAGGGCAACTaGGTTGTTGTTACCACACCT +
Preference number: 5 (lower is better)
Translates to: GASLTFGVGPYTGMELLKQTEGN*VVVTTP
Trigger: AGGTGTGGTAACAACAACCAAGTTGCCCTCAGTCTG...TTTTAGCAGTTCCATCCCAGTGTAAGGACCAACCCCAAAAGTTAAACTTGCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS-3UTR CAA 90 bp GAAATTTCCAGCTCAGGAAAGCTGTTGGATTTCTGTCAGTCTGAACTGGCCCTTGTGTGTATTTTTGCTTaGACATTGGATGTGGGGGCA +
Preference number: 5 (lower is better)
Translates to: EISSSGKLLDFCQSELALVCIFA*TLDVGA
Trigger: TGCCCCCACATCCAATGTCAAAGCAAAAATACACAC...AAGGGCCAGTTCAGACTGACAGAAATCCAACAGCTTTCCTGAGCTGGAAATTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS CAA 90 bp CTTGAGCTCAGCTGCACAGGTGCGGGGGTCTCGCTTTCCATGGTTTaGCCCGGGCAGCGGCGGCGGCGGCGGCGGCGGCGGCAGGGCGGG +
Preference number: 6 (lower is better)
Translates to: LELSCTGAGVSLSMV*PGQRRRRRRRRQGG
Trigger: CCCGCCCTGCCGCCGCCGCCGCCGCCGCCGCCGCTGCCCGGGCAAAACCATGGAAAGCGAGACCCCCGCACCTGTGCAGCTGAGCTCAAG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS CAA 72 bp AGCTGCACAGGTGCGGGGGTCTCGCTTTCCATGGTTTaGCCCGGGCAGCGGCGGCGGCGGCGGCGGCGGCGG +
Preference number: 6 (lower is better)
Translates to: SCTGAGVSLSMV*PGQRRRRRRRR
Trigger: CCGCCGCCGCCGCCGCCGCCGCCGCTGCCCGGGCAAAACCATGGAAAGCGAGACCCCCGCACCTGTGCAGCT
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS CCA 72 bp AGCTCAGCTGCACAGGTGCGGGGGTCTCGCTTTCCATaGTTTTGCCCGGGCAGCGGCGGCGGCGGCGGCGGC +
Preference number: 6 (lower is better)
Translates to: SSAAQVRGSRFP*FCPGSGGGGGG
Trigger: GCCGCCGCCGCCGCCGCCGCTGCCCGGGCAAAACCATGGAAAGCGAGACCCCCGCACCTGTGCAGCTGAGCT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS TCA 72 bp CGGAGGCGCTCCCACCTACTGCATTACGGGTGGTGCTaGACCGGACAGCTCCCTGCGCCGCCCGCTCCGCGC +
Preference number: 6 (lower is better)
Translates to: RRRSHLLHYGWC*TGQLPAPPAPR
Trigger: GCGCGGAGCGGGCGGCGCAGGGAGCTGTCCGGTTCAGCACCACCCGTAATGCAGTAGGTGGGAGCGCCTCCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS CAA 90 bp GCGCGGCGGCGGCGGCGGCAGCAGGACGAGCAGCGGCGGCGGTTATaGTTGTTGGTGGCGGGGGTAGTGTTGGCGAAGTGGGGGAGAGAG +
Preference number: 6 (lower is better)
Translates to: ARRRRRQQDEQRRRL*LLVAGVVLAKWGRE
Trigger: CTCTCTCCCCCACTTCGCCAACACTACCCCCGCCACCAACAACAATAACCGCCGCCGCTGCTCGTCCTGCTGCCGCCGCCGCCGCCGCGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS GCA 72 bp TACCGGCTGGGCGCCCGCGGAGGCGCTCCCACCTACTaGATTACGGGTGGTGCTGAACCGGACAGCTCCCTG +
Preference number: 6 (lower is better)
Translates to: YRLGARGGAPTY*ITGGAEPDSSL
Trigger: CAGGGAGCTGTCCGGTTCAGCACCACCCGTAATGCAGTAGGTGGGAGCGCCTCCGCGGGCGCCCAGCCGGTA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS CCA 72 bp CCTGGAGGAAGCTGTTATCCCTGTCGGAGTTGTAGGTaGCGGTGGGCGTGGTGGCGGCCTTCAGGGGGTCCC +
Preference number: 6 (lower is better)
Translates to: PGGSCYPCRSCR*RWAWWRPSGGP
Trigger: GGGACCCCCTGAAGGCCGCCACCACGCCCACCGCCACCTACAACTCCGACAGGGATAACAGCTTCCTCCAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS CAA 72 bp CGGCAGCAGGACGAGCAGCGGCGGCGGTTATTGTTGTaGGTGGCGGGGGTAGTGTTGGCGAAGTGGGGGAGA +
Preference number: 6 (lower is better)
Translates to: RQQDEQRRRLLL*VAGVVLAKWGR
Trigger: TCTCCCCCACTTCGCCAACACTACCCCCGCCACCAACAACAATAACCGCCGCCGCTGCTCGTCCTGCTGCCG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS CCA 72 bp CGAGGCGGATTTCCCTCCCCCTATCTGCAAAGCTCCTaGAAACGAGGGAGCCGGCGTCTTGCTGCAGGGTGG +
Preference number: 6 (lower is better)
Translates to: RGGFPSPYLQSS*KRGSRRLAAGW
Trigger: CCACCCTGCAGCAAGACGCCGGCTCCCTCGTTTCCAGGAGCTTTGCAGATAGGGGGAGGGAAATCCGCCTCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS CCA 72 bp GGTCTTCTGGCGAGGCCCGCGGTCTTTATACGGGGGTaGTCCGGCGGTTGGCTGTGTTGGAGTGGAGAGAGT +
Preference number: 6 (lower is better)
Translates to: GLLARPAVFIRG*SGGWLCWSGES
Trigger: ACTCTCTCCACTCCAACACAGCCAACCGCCGGACCACCCCCGTATAAAGACCGCGGGCCTCGCCAGAAGACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS CAA 72 bp ATGGAGATCTCCGTGGACGGCAGGGTGTTGAAGCCCTaGATGCCCACGGGGGAGGCGTCCCTGGAGTGTGAG +
Preference number: 6 (lower is better)
Translates to: MEISVDGRVLKP*MPTGEASLECE
Trigger: CTCACACTCCAGGGACGCCTCCCCCGTGGGCATCAAGGGCTTCAACACCCTGCCGTCCACGGAGATCTCCAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS GCA 72 bp GTGGCCCGCAGCTGTTTGTGCCGGTCGATAAACATGTaGACCGCCAGCACCCCGACCATCTCGGCGATGATG +
Preference number: 6 (lower is better)
Translates to: VARSCLCRSINM*TASTPTISAMM
Trigger: CATCATCGCCGAGATGGTCGGGGTGCTGGCGGTGCACATGTTTATCGACCGGCACAAACAGCTGCGGGCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS CAA 72 bp GAGGCCCGCGGTCTTTATACGGGGGTGGTCCGGCGGTaGGCTGTGTTGGAGTGGAGAGAGTCCTTGTTCTCC +
Preference number: 6 (lower is better)
Translates to: EARGLYTGVVRR*AVLEWRESLFS
Trigger: GGAGAACAAGGACTCTCTCCACTCCAACACAGCCAACCGCCGGACCACCCCCGTATAAAGACCGCGGGCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS CCA 72 bp AGGCCCGCGGTCTTTATACGGGGGTGGTCCGGCGGTTaGCTGTGTTGGAGTGGAGAGAGTCCTTGTTCTCCT +
Preference number: 6 (lower is better)
Translates to: RPAVFIRGWSGG*LCWSGESPCSP
Trigger: AGGAGAACAAGGACTCTCTCCACTCCAACACAGCCAACCGCCGGACCACCCCCGTATAAAGACCGCGGGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS TCA 72 bp GCCTCCCCTGCGGCAGATGAGCGGTGCAGATGGGTTTaGCAGACCTTAACTAGGAGTGGACTCAGGCCCTCT +
Preference number: 6 (lower is better)
Translates to: ASPAADERCRWV*QTLTRSGLRPS
Trigger: AGAGGGCCTGAGTCCACTCCTAGTTAAGGTCTGTCAAACCCATCTGCACCGCTCATCTGCCGCAGGGGAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480002.1
CDS GCA 72 bp TCCTGGAGAATCGAGGCGGATTTCCCTCCCCCTATCTaGAAAGCTCCTGGAAACGAGGGAGCCGGCGTCTTG +
Preference number: 6 (lower is better)
Translates to: SWRIEADFPPPI*KAPGNEGAGVL
Trigger: CAAGACGCCGGCTCCCTCGTTTCCAGGAGCTTTGCAGATAGGGGGAGGGAAATCCGCCTCGATTCTCCAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS CAA 90 bp TCTTCTGGCGAGGCCCGCGGTCTTTATACGGGGGTGGTCCGGCGGTaGGCTGTGTTGGAGTGGAGAGAGTCCTTGTTCTCCTTCTGGATA +
Preference number: 6 (lower is better)
Translates to: SSGEARGLYTGVVRR*AVLEWRESLFSFWI
Trigger: TATCCAGAAGGAGAACAAGGACTCTCTCCACTCCAACACAGCCAACCGCCGGACCACCCCCGTATAAAGACCGCGGGCCTCGCCAGAAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS GCA 72 bp AGCCGAGATGCAACCTTCGGTCTTCGTTCTCGGCTCTaGGGCCTGCGCCATGAAAATCCTTTGCTTCGCCAG +
Preference number: 6 (lower is better)
Translates to: SRDATFGLRSRL*GLRHENPLLRQ
Trigger: CTGGCGAAGCAAAGGATTTTCATGGCGCAGGCCGCAGAGCCGAGAACGAAGACCGAAGGTTGCATCTCGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS TCA 72 bp CTTCGGTCTTCGTTCTCGGCTCTGCGGCCTGCGCCATaGAAATCCTTTGCTTCGCCAGTTCTCTTCCTTGGG +
Preference number: 6 (lower is better)
Translates to: LRSSFSALRPAP*KSFASPVLFLG
Trigger: CCCAAGGAAGAGAACTGGCGAAGCAAAGGATTTTCATGGCGCAGGCCGCAGAGCCGAGAACGAAGACCGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS GCA 72 bp AGGTGCAGCTCAGCCCGCCTCCTTCAGCCTAAGCTCTaGCCACCCAGTCACTTCATTGCTCAGTCATCAAAG +
Preference number: 6 (lower is better)
Translates to: RCSSARLLQPKL*PPSHFIAQSSK
Trigger: CTTTGATGACTGAGCAATGAAGTGACTGGGTGGGCAGAGCTTAGGCTGAAGGAGGCGGGCTGAGCTGCACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480002.1
CDS CAA 90 bp CGGCGCTTTCGTTTCAGACCAGACTTCCCAGTATTCTGTAAGCCCTaGAGCTCAGCTGCACAGGTGCGGGGGTCTCGCTTTCCATGGTTT +
Preference number: 6 (lower is better)
Translates to: RRFRFRPDFPVFCKP*SSAAQVRGSRFPWF
Trigger: AAACCATGGAAAGCGAGACCCCCGCACCTGTGCAGCTGAGCTCAAGGGCTTACAGAATACTGGGAAGTCTGGTCTGAAACGAAAGCGCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS CCA 72 bp TATACGGGGGTGGTCCGGCGGTTGGCTGTGTTGGAGTaGAGAGAGTCCTTGTTCTCCTTCTGGATACAGTTG +
Preference number: 6 (lower is better)
Translates to: YTGVVRRLAVLE*RESLFSFWIQL
Trigger: CAACTGTATCCAGAAGGAGAACAAGGACTCTCTCCACTCCAACACAGCCAACCGCCGGACCACCCCCGTATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS CAA 72 bp CGTTTCAGACCAGACTTCCCAGTATTCTGTAAGCCCTaGAGCTCAGCTGCACAGGTGCGGGGGTCTCGCTTT +
Preference number: 6 (lower is better)
Translates to: RFRPDFPVFCKP*SSAAQVRGSRF
Trigger: AAAGCGAGACCCCCGCACCTGTGCAGCTGAGCTCAAGGGCTTACAGAATACTGGGAAGTCTGGTCTGAAACG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS CAA 72 bp GGTCTTTATACGGGGGTGGTCCGGCGGTTGGCTGTGTaGGAGTGGAGAGAGTCCTTGTTCTCCTTCTGGATA +
Preference number: 6 (lower is better)
Translates to: GLYTGVVRRLAV*EWRESLFSFWI
Trigger: TATCCAGAAGGAGAACAAGGACTCTCTCCACTCCAACACAGCCAACCGCCGGACCACCCCCGTATAAAGACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS GCA 72 bp ATGCAACCTTCGGTCTTCGTTCTCGGCTCTGCGGCCTaGGCCATGAAAATCCTTTGCTTCGCCAGTTCTCTT +
Preference number: 6 (lower is better)
Translates to: MQPSVFVLGSAA*AMKILCFASSL
Trigger: AAGAGAACTGGCGAAGCAAAGGATTTTCATGGCGCAGGCCGCAGAGCCGAGAACGAAGACCGAAGGTTGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS GCA 72 bp AATGCTGGAGGCCCTCACGGCCCGGAGGAAATATTCTaGTGTGTCAGCTTCGTAATCTGCATCCTCTGGGAA +
Preference number: 6 (lower is better)
Translates to: NAGGPHGPEEIF*CVSFVICILWE
Trigger: TTCCCAGAGGATGCAGATTACGAAGCTGACACAGCAGAATATTTCCTCCGGGCCGTGAGGGCCTCCAGCATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS TCA 72 bp GCCAATAGTCGGTTCCCACAGCTATGGTCATCAGGCTaGAGGCAGCGAAAGCACCAACGGTGGTTAAAAGCA +
Preference number: 6 (lower is better)
Translates to: ANSRFPQLWSSG*RQRKHQRWLKA
Trigger: TGCTTTTAACCACCGTTGGTGCTTTCGCTGCCTTCAGCCTGATGACCATAGCTGTGGGAACCGACTATTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS CAA 72 bp TGGGTCAAATTCCCTGCCATGGCCTTTTCTGGGTGCTaGGGGTGCAGAAATGAATGGGACATAGCTCTGCCT +
Preference number: 6 (lower is better)
Translates to: WVKFPAMAFSGC*GCRNEWDIALP
Trigger: AGGCAGAGCTATGTCCCATTCATTTCTGCACCCCAAGCACCCAGAAAAGGCCATGGCAGGGAATTTGACCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480002.1
CDS TCA 72 bp TGTAGAACTCGCTGGCTGCGATGCAGAGGCCACCCATaGAAAGCAGAATCACACTCAGGATTGGGAAAATGC +
Preference number: 6 (lower is better)
Translates to: CRTRWLRCRGHP*KAESHSGLGKC
Trigger: GCATTTTCCCAATCCTGAGTGTGATTCTGCTTTTCATGGGTGGCCTCTGCATCGCAGCCAGCGAGTTCTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS GCA 72 bp GATGATGTTGTGTCGAGTTTTGTAGAACTCGCTGGCTaGGATGCAGAGGCCACCCATGAAAAGCAGAATCAC +
Preference number: 6 (lower is better)
Translates to: DDVVSSFVELAG*DAEATHEKQNH
Trigger: GTGATTCTGCTTTTCATGGGTGGCCTCTGCATCGCAGCCAGCGAGTTCTACAAAACTCGACACAACATCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300105.7
CDS CAA 72 bp CCAGTCACTTCATTGCTCAGTCATCAAAGTGCTTTTTaGGGTCAAATTCCCTGCCATGGCCTTTTCTGGGTG +
Preference number: 6 (lower is better)
Translates to: PVTSLLSHQSAF*GQIPCHGLFWV
Trigger: CACCCAGAAAAGGCCATGGCAGGGAATTTGACCCAAAAAAGCACTTTGATGACTGAGCAATGAAGTGACTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480002.1
CDS CAA 72 bp AAGAGTGTAAATTATAAAGATCACACGGGAAGAGGCTaGCCTTTTGAGATCAGAAACTGTTCCAGTTGCAGT +
Preference number: 6 (lower is better)
Translates to: KSVNYKDHTGRG*PFEIRNCSSCS
Trigger: ACTGCAACTGGAACAGTTTCTGATCTCAAAAGGCAAGCCTCTTCCCGTGTGATCTTTATAATTTACACTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300105.7