RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CACNB3 (Homo sapiens)

Ensembl gene IDs: ENSG00000167535

Ensembl transcript IDs: ENST00000301050.7, ENST00000536187.6, ENST00000540990.5, ENST00000547230.5, ENST00000547392.5, ENST00000547693.5, ENST00000547818.5, ENST00000548279.5, ENST00000548860.5, ENST00000548874.5, ENST00000549226.5, ENST00000550064.5, ENST00000550168.5, ENST00000550190.1, ENST00000550391.5, ENST00000550483.5, ENST00000550771.5, ENST00000551544.5, ENST00000551716.5, ENST00000552465.1, ENST00000552812.1

Found 794 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTCTCTGGCCCGAGCGTGGCCAGCCTGCTGCTCCAGTCTTGGATGTaGCTGCCACACCCCAGCAAACAGATGGGTGTGCCACCCTGGGGG +
Preference number: 1 (lower is better)
Translates to: LSGPSVASLLLQSWM*LPHPSKQMGVPPWG
Trigger: CCCCCAGGGTGGCACACCCATCTGTTTGCTGGGGTGTGGCAGCCACATCCAAGACTGGAGCAGCAGGCTGGCCACGCTCGGGCCAGAGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
3UTR GCA 90 bp GGGCAGCAGGAGGCTGTCAGTAGCTATCCTTGGGCCAAGGCCGGTTaGGCTGCCAGTTCCGGTCACTGTGGTTGTGCTCTGAGTCCTGGG +
Preference number: 1 (lower is better)
Translates to: GQQEAVSSYPWAKAG*AASSGHCGCALSPG
Trigger: CCCAGGACTCAGAGCACAACCACAGTGACCGGAACTGGCAGCGCAACCGGCCTTGGCCCAAGGATAGCTACTGACAGCCTCCTGCTGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551544.5
3UTR CCA 90 bp TCCTCCAGGTGGCGGGAGCTACGCTGTGAAGATCCTGTCCAGGCTTaGCGGGAGCTCTCGCTGGCCTCATCAGAGGGCATCAAGCTGTCC +
Preference number: 1 (lower is better)
Translates to: SSRWRELRCEDPVQA*RELSLASSEGIKLS
Trigger: GGACAGCTTGATGCCCTCTGATGAGGCCAGCGAGAGCTCCCGCCAAGCCTGGACAGGATCTTCACAGCGTAGCTCCCGCCACCTGGAGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551544.5
3UTR TCA 90 bp GTAGGCATCTGCATAGTCCTCCTCCAGGTGGCGGGAGCTACGCTGTaGAGATCCTGTCCAGGCTTGGCGGGAGCTCTCGCTGGCCTCATC +
Preference number: 1 (lower is better)
Translates to: VGICIVLLQVAGATL*RSCPGLAGALAGLI
Trigger: GATGAGGCCAGCGAGAGCTCCCGCCAAGCCTGGACAGGATCTTCACAGCGTAGCTCCCGCCACCTGGAGGAGGACTATGCAGATGCCTAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551544.5
3UTR CCA 90 bp CGGTCACTGTGGTTGTGCTCTGAGTCCTGGGCTAGAAGCCGGTCTTaGGGGTCATGCCCGTTAGCACTAGGCAGCCCCGAGGTGTGTTGG +
Preference number: 1 (lower is better)
Translates to: RSLWLCSESWARSRS*GSCPLALGSPEVCW
Trigger: CCAACACACCTCGGGGCTGCCTAGTGCTAACGGGCATGACCCCCAAGACCGGCTTCTAGCCCAGGACTCAGAGCACAACCACAGTGACCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551544.5
3UTR CCA 90 bp CGGTTGCGCTGCCAGTTCCGGTCACTGTGGTTGTGCTCTGAGTCCTaGGCTAGAAGCCGGTCTTGGGGGTCATGCCCGTTAGCACTAGGC +
Preference number: 1 (lower is better)
Translates to: RLRCQFRSLWLCSES*ARSRSWGSCPLALG
Trigger: GCCTAGTGCTAACGGGCATGACCCCCAAGACCGGCTTCTAGCCCAGGACTCAGAGCACAACCACAGTGACCGGAACTGGCAGCGCAACCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000551544.5
3UTR GCA 90 bp AAGAGCTTCAGCTGTGAGCTCTCTCTGGCCCGAGCGTGGCCAGCCTaGTGCTCCAGTCTTGGATGTGGCTGCCACACCCCAGCAAACAGA +
Preference number: 1 (lower is better)
Translates to: KSFSCELSLARAWPA*CSSLGCGCHTPANR
Trigger: TCTGTTTGCTGGGGTGTGGCAGCCACATCCAAGACTGGAGCAGCAGGCTGGCCACGCTCGGGCCAGAGAGAGCTCACAGCTGAAGCTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
3UTR GCA 90 bp CACATGCCCTCCTTCCCCAAACCCCCATCCAGGTTGGCTCCCATCTaGCACTTGGCTTCACCATGCTCCTGGTCCCTGGTCCTGTCACAT +
Preference number: 1 (lower is better)
Translates to: HMPSFPKPPSRLAPI*HLASPCSWSLVLSH
Trigger: ATGTGACAGGACCAGGGACCAGGAGCATGGTGAAGCCAAGTGGCAGATGGGAGCCAACCTGGATGGGGGTTTGGGGAAGGAGGGCATGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
3UTR TCA 90 bp CAGTGCTCACCAGGAGCTCTGCCCACTGCTCACTCCAGCAGGCTTTaGGGGCTCCCGAATGGTGGACAGGAAGGAATTGGAGGAAAAGGG +
Preference number: 1 (lower is better)
Translates to: QCSPGALPTAHSSRL*GLPNGGQEGIGGKG
Trigger: CCCTTTTCCTCCAATTCCTTCCTGTCCACCATTCGGGAGCCCTCAAAGCCTGCTGGAGTGAGCAGTGGGCAGAGCTCCTGGTGAGCACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550483.5
3UTR GCA 90 bp GCTTTTGCTTCTGCTTGGCTAGAGATGGCGGAGGGGAGCGTCGGTTaGCAATGTCACTCAGGCTGGAAGGGTTCCCAGATCTCCTGGCCT +
Preference number: 1 (lower is better)
Translates to: AFASAWLEMAEGSVG*QCHSGWKGSQISWP
Trigger: AGGCCAGGAGATCTGGGAACCCTTCCAGCCTGAGTGACATTGGCAACCGACGCTCCCCTCCGCCATCTCTAGCCAAGCAGAAGCAAAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551544.5
3UTR GCA 90 bp AGCTGCAGGGATTTGGCCAGCTCAAATATGCGCTCGATCTCACTCTaGACTTCCGCTATGGAGGGAGGCAGCAGCAGTGCTCACCAGGAG +
Preference number: 1 (lower is better)
Translates to: SCRDLASSNMRSISL*TSAMEGGSSSAHQE
Trigger: CTCCTGGTGAGCACTGCTGCTGCCTCCCTCCATAGCGGAAGTGCAGAGTGAGATCGAGCGCATATTTGAGCTGGCCAAATCCCTGCAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550483.5
3UTR CCA 90 bp CCATCCAGGTTGGCTCCCATCTGCCACTTGGCTTCACCATGCTCCTaGTCCCTGGTCCTGTCACATGTTAAGAAGCTTCCTGGCAGGGTG +
Preference number: 1 (lower is better)
Translates to: PSRLAPICHLASPCS*SLVLSHVKKLPGRV
Trigger: CACCCTGCCAGGAAGCTTCTTAACATGTGACAGGACCAGGGACCAGGAGCATGGTGAAGCCAAGTGGCAGATGGGAGCCAACCTGGATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
3UTR CCA 90 bp CCTCCTTCCCCAAACCCCCATCCAGGTTGGCTCCCATCTGCCACTTaGCTTCACCATGCTCCTGGTCCCTGGTCCTGTCACATGTTAAGA +
Preference number: 1 (lower is better)
Translates to: PPSPNPHPGWLPSAT*LHHAPGPWSCHMLR
Trigger: TCTTAACATGTGACAGGACCAGGGACCAGGAGCATGGTGAAGCCAAGTGGCAGATGGGAGCCAACCTGGATGGGGGTTTGGGGAAGGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
3UTR GCA 90 bp AAACCCCCATCCAGGTTGGCTCCCATCTGCCACTTGGCTTCACCATaGTCCTGGTCCCTGGTCCTGTCACATGTTAAGAAGCTTCCTGGC +
Preference number: 1 (lower is better)
Translates to: KPPSRLAPICHLASP*SWSLVLSHVKKLPG
Trigger: GCCAGGAAGCTTCTTAACATGTGACAGGACCAGGGACCAGGAGCATGGTGAAGCCAAGTGGCAGATGGGAGCCAACCTGGATGGGGGTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
3UTR GCA 90 bp GTCTCATTTCTAATGTATGGCAGTGAGGTGACTGGAGGCCCTGGATaGCAAAGCAGTCCCTTGACTGTCAGGACTTGTGCCTGCTCAGGG +
Preference number: 1 (lower is better)
Translates to: VSFLMYGSEVTGGPG*QSSPLTVRTCACSG
Trigger: CCCTGAGCAGGCACAAGTCCTGACAGTCAAGGGACTGCTTTGGCATCCAGGGCCTCCAGTCACCTCACTGCCATACATTAGAAATGAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
3UTR CCA 90 bp GTGCAGAAAATCTTTGGCCTCAAAGTTGACTCCAGAGCCCTGGACTaGGCACTCCTCATCCAGTACGCCACAGTAGCTGACATTGGTCCT +
Preference number: 1 (lower is better)
Translates to: VQKIFGLKVDSRALD*ALLIQYATVADIGP
Trigger: AGGACCAATGTCAGCTACTGTGGCGTACTGGATGAGGAGTGCCCAGTCCAGGGCTCTGGAGTCAACTTTGAGGCCAAAGATTTTCTGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551544.5
3UTR TCA 90 bp CTGGAGCCCGGTTCTCCAAAGATGTATGAGGGACAAGAACAGAAATaGCAGGATGCAGGGCAAAAGAATGAGAAAGGCAAGGAGGCCCCC +
Preference number: 1 (lower is better)
Translates to: LEPGSPKMYEGQEQK*QDAGQKNEKGKEAP
Trigger: GGGGGCCTCCTTGCCTTTCTCATTCTTTTGCCCTGCATCCTGTCATTTCTGTTCTTGTCCCTCATACATCTTTGGAGAACCGGGCTCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
3UTR TCA 90 bp CACTCTCCCTGCTGTCTGAGCTCCGGGAATCACTGCTTAATGAGCTaGTTTGTCTCAGTGGGTCAGGAGATAAAAGCAAAGAGGAGAATT +
Preference number: 1 (lower is better)
Translates to: HSPCCLSSGNHCLMS*FVSVGQEIKAKRRI
Trigger: AATTCTCCTCTTTGCTTTTATCTCCTGACCCACTGAGACAAATCAGCTCATTAAGCAGTGATTCCCGGAGCTCAGACAGCAGGGAGAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551544.5
3UTR CCA 90 bp AACCCTAACCTAACAAGCGGCAGCTATGAGTCAGGGAACAAAGTCTaGAGCCCGGTTCTCCAAAGATGTATGAGGGACAAGAACAGAAAT +
Preference number: 1 (lower is better)
Translates to: NPNLTSGSYESGNKV*SPVLQRCMRDKNRN
Trigger: ATTTCTGTTCTTGTCCCTCATACATCTTTGGAGAACCGGGCTCCAGACTTTGTTCCCTGACTCATAGCTGCCGCTTGTTAGGTTAGGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
3UTR-3UTR GCA 90 bp TACCTGGAATGGGAGCCTAGTAGGGGTCACTGCCCAGGAGGTGAGGGGGTCCCCAGCTGCGCCTGTGCCTaGCAGGGTAGGGCAGCAGGA +
Preference number: 2 (lower is better)
Translates to: YLEWEPSRGHCPGGEGVPSCACA*QGRAAG
Trigger: TCCTGCTGCCCTACCCTGGCAGGCACAGGCGCAGCT...GGGGACCCCCTCACCTCCTGGGCAGTGACCCCTACTAGGCTCCCATTCCAGGTA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000301050.7
ENST00000536187.6
ENST00000540990.5
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
3UTR-3UTR CCA 90 bp AGCCGGTCTTGGGGGTCATGCCCGTTAGCACTAGGCAGCCCCGAGGTGTGTTGGGTCCGGGGATGGCACTaGGAGGACCCAGAAGTCCGG +
Preference number: 2 (lower is better)
Translates to: SRSWGSCPLALGSPEVCWVRGWH*EDPEVR
Trigger: CCGGACTTCTGGGTCCTCCCAGTGCCATCCCCGGAC...CCAACACACCTCGGGGCTGCCTAGTGCTAACGGGCATGACCCCCAAGACCGGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000551544.5
3UTR-3UTR CCA 90 bp GCCCTCCTTCCCCAAACCCCCATCCAGGTTGGCTCCCATCTGCCACTTGGCTTCGCTGTGAGCTCTCTCTaGCCCGAGCGTGGCCAGCCT +
Preference number: 2 (lower is better)
Translates to: ALLPQTPIQVGSHLPLGFAVSSL*PERGQP
Trigger: AGGCTGGCCACGCTCGGGCCAGAGAGAGCTCACAGC...GAAGCCAAGTGGCAGATGGGAGCCAACCTGGATGGGGGTTTGGGGAAGGAGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
3UTR-3UTR TCA 90 bp CCAGGAGGTGAGGGGGTCCCCTGTTTCTCCCAGAACCTTGGGACCACAGGCAGCAGCCTAGTGCCAGCCTaGTGCCAGTCTAACGCCACC +
Preference number: 2 (lower is better)
Translates to: PGGEGVPCFSQNLGTTGSSLVPA*CQSNAT
Trigger: GGTGGCGTTAGACTGGCATCAGGCTGGCACTAGGCT...GCTGCCTGTGGTCCCAAGGTTCTGGGAGAAACAGGGGACCCCCTCACCTCCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000301050.7
ENST00000536187.6
ENST00000540990.5
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
3UTR-3UTR TCA 90 bp AGCCGGTCTTGGGGGTCATGCCCGTTAGCACTAGGCAGCCCCGAGGTGTGTTGGGCGGGAGCTACGCTGTaGAGATCCTGTCCAGGCTTG +
Preference number: 2 (lower is better)
Translates to: SRSWGSCPLALGSPEVCWAGATL*RSCPGL
Trigger: CAAGCCTGGACAGGATCTTCACAGCGTAGCTCCCGC...CCAACACACCTCGGGGCTGCCTAGTGCTAACGGGCATGACCCCCAAGACCGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000551544.5
3UTR-3UTR GCA 90 bp AGCCGGTCTTGGGGGTCATGCCCGTTAGCACTAGGCAGCCCCGAGGTGTGTTGGGAGGGGAGCGTCGGTTaGCAATGTCACTCAGGCTGG +
Preference number: 2 (lower is better)
Translates to: SRSWGSCPLALGSPEVCWEGSVG*QCHSGW
Trigger: CCAGCCTGAGTGACATTGGCAACCGACGCTCCCCTC...CCAACACACCTCGGGGCTGCCTAGTGCTAACGGGCATGACCCCCAAGACCGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000551544.5
3UTR-3UTR CCA 90 bp CTGAGTCTGGTGGGAAGGACCCTGCTAAGGGGATCCTGGCCTGAGGGCACTGCCGGGCAGCTTCCTGTGTaGGAGGAGAGGAAGGTGCCA +
Preference number: 2 (lower is better)
Translates to: LSLVGRTLLRGSWPEGTAGQLPV*EERKVP
Trigger: TGGCACCTTCCTCTCCTCCCACACAGGAAGCTGCCC...GGCAGTGCCCTCAGGCCAGGATCCCCTTAGCAGGGTCCTTCCCACCAGACTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
3UTR-3UTR CCA 90 bp CCCCAGCAGCTGCTGGTTCTGAAGTCCGGGGATGGCACTGGGAGGACCCAGAAGGGGCAGCTTCCTGTGTaGGAGGAGAGGAAGGTGCCA +
Preference number: 2 (lower is better)
Translates to: PQQLLVLKSGDGTGRTQKGQLPV*EERKVP
Trigger: TGGCACCTTCCTCTCCTCCCACACAGGAAGCTGCCC...CTTCTGGGTCCTCCCAGTGCCATCCCCGGACTTCAGAACCAGCAGCTGCTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000551544.5
3UTR-3UTR TCA 90 bp AGCCGGTCTTGGGGGTCATGCCCGTTAGCACTAGGCAGCCCCGAGGTGTGTTGGCAGGTGCTTCATCTGTaGCTTCCCCCGGGAGCGAAT +
Preference number: 2 (lower is better)
Translates to: SRSWGSCPLALGSPEVCWQVLHL*LPPGAN
Trigger: ATTCGCTCCCGGGGGAAGTCACAGATGAAGCACCTG...CCAACACACCTCGGGGCTGCCTAGTGCTAACGGGCATGACCCCCAAGACCGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000551544.5
3UTR-3UTR GCA 90 bp ACTGGAGGCCCTGGATGCCAAAGCAGTCCCTTGACTGTCAGGACTTGTGCCTGCAGCTGCGCCTGTGCCTaGCAGGGTAGGGCAGCAGGA +
Preference number: 2 (lower is better)
Translates to: TGGPGCQSSPLTVRTCACSCACA*QGRAAG
Trigger: TCCTGCTGCCCTACCCTGGCAGGCACAGGCGCAGCT...GCAGGCACAAGTCCTGACAGTCAAGGGACTGCTTTGGCATCCAGGGCCTCCAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
3UTR-3UTR GCA 90 bp AGCCGGTCTTGGGGGTCATGCCCGTTAGCACTAGGCAGCCCCGAGGTGTGTTGGGAGCACAGATCGCTTTaGCAGGGAGAGGTCGGCTGT +
Preference number: 2 (lower is better)
Translates to: SRSWGSCPLALGSPEVCWEHRSL*QGEVGC
Trigger: ACAGCCGACCTCTCCCTGGCAAAGCGATCTGTGCTC...CCAACACACCTCGGGGCTGCCTAGTGCTAACGGGCATGACCCCCAAGACCGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000551544.5
3UTR-3UTR CCA 90 bp CTGCTCCAGTCTTGGATGTGGCTGCCACACCCCAGCAAACAGATGGGTGTGCCAGAGGGCACTGCCCAGTaGGGCAGCTTCCTGTGTGGG +
Preference number: 2 (lower is better)
Translates to: LLQSWMWLPHPSKQMGVPEGTAQ*GSFLCG
Trigger: CCCACACAGGAAGCTGCCCCACTGGGCAGTGCCCTC...TGGCACACCCATCTGTTTGCTGGGGTGTGGCAGCCACATCCAAGACTGGAGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
3UTR-3UTR CCA 90 bp CAAACCCCCATCCAGGTTGGCTCCCATCTGCCACTTGGCTTCACCATGCTCCTGGCTGTGAGCTCTCTCTaGCCCGAGCGTGGCCAGCCT +
Preference number: 2 (lower is better)
Translates to: QTPIQVGSHLPLGFTMLLAVSSL*PERGQP
Trigger: AGGCTGGCCACGCTCGGGCCAGAGAGAGCTCACAGC...CAGGAGCATGGTGAAGCCAAGTGGCAGATGGGAGCCAACCTGGATGGGGGTTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
3UTR-3UTR CCA 90 bp TTCCCCAAACCCCCATCCAGGTTGGCTCCCATCTGCCACTTGGCTTCACCATGCGGGCTGGGTGGTGCGTaGCCCGCCAGTAAACCTCCA +
Preference number: 2 (lower is better)
Translates to: FPKPPSRLAPICHLASPCGLGGA*PASKPP
Trigger: TGGAGGTTTACTGGCGGGCCACGCACCACCCAGCCC...GCATGGTGAAGCCAAGTGGCAGATGGGAGCCAACCTGGATGGGGGTTTGGGGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000551544.5
3UTR CAA 90 bp GTCTTGGGGGTCATGCCCGTTAGCACTAGGCAGCCCCGAGGTGTGTaGGCGGTGAGGCTGGTACAGGTCCTGGTAGGCATCTGCATAGTC +
Preference number: 2 (lower is better)
Translates to: VLGVMPVSTRQPRGV*AVRLVQVLVGICIV
Trigger: GACTATGCAGATGCCTACCAGGACCTGTACCAGCCTCACCGCCAACACACCTCGGGGCTGCCTAGTGCTAACGGGCATGACCCCCAAGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000551544.5
3UTR-3UTR TCA 90 bp AGCCATAAGGCAAGAGTAGCCGGGGAGACAGGTCCTCTGTGCCCTGTCTCTCCCAGCCTAGTGCCAGCCTaGTGCCAGTCTAACGCCACC +
Preference number: 2 (lower is better)
Translates to: SHKARVAGETGPLCPVSPSLVPA*CQSNAT
Trigger: GGTGGCGTTAGACTGGCATCAGGCTGGCACTAGGCT...GGGAGAGACAGGGCACAGAGGACCTGTCTCCCCGGCTACTCTTGCCTTATGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
3UTR-3UTR TCA 90 bp TTAATGGGGCATCCCTTCCCTGAGTCTGGTGGGAAGGACCCTGCTAAGGGGATCGGGGCATCCCTTCCCTaGGTCTGGTGGGAAGGACCC +
Preference number: 2 (lower is better)
Translates to: LMGHPFPESGGKDPAKGIGASLP*VWWEGP
Trigger: GGGTCCTTCCCACCAGACTCAGGGAAGGGATGCCCC...GATCCCCTTAGCAGGGTCCTTCCCACCAGACTCAGGGAAGGGATGCCCCATTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
3UTR-3UTR TCA 90 bp GGATGCCAAAGCAGTCCCTTGACTGTCAGGACTTGTGCCTGCTCAGGGACCTTGGGGGCATCCCTTCCCTaGGTCTGGTGGGAAGGACCC +
Preference number: 2 (lower is better)
Translates to: GCQSSPLTVRTCACSGTLGASLP*VWWEGP
Trigger: GGGTCCTTCCCACCAGACTCAGGGAAGGGATGCCCC...CAAGGTCCCTGAGCAGGCACAAGTCCTGACAGTCAAGGGACTGCTTTGGCATCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
3UTR-3UTR TCA 90 bp CCAGGAGGTGAGGGGGTCCCCTGTTTCTCCCAGAACCTTGGGACCACAGGCAGCGGTTGCCTGTTTCTCTaGGCAAAGCGCTTCCTCTCC +
Preference number: 2 (lower is better)
Translates to: PGGEGVPCFSQNLGTTGSGCLFL*AKRFLS
Trigger: GGAGAGGAAGCGCTTTGCTCAGAGAAACAGGCAACC...GCTGCCTGTGGTCCCAAGGTTCTGGGAGAAACAGGGGACCCCCTCACCTCCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000551544.5
3UTR-3UTR TCA 90 bp CAAACCCCCATCCAGGTTGGCTCCCATCTGCCACTTGGCTTCACCATGCTCCTGCTCCAGGGAGACGTCTaGGTCCAGAGATGGGCGGCT +
Preference number: 2 (lower is better)
Translates to: QTPIQVGSHLPLGFTMLLLQGDV*VQRWAA
Trigger: AGCCGCCCATCTCTGGACTCAGACGTCTCCCTGGAG...CAGGAGCATGGTGAAGCCAAGTGGCAGATGGGAGCCAACCTGGATGGGGGTTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000551544.5
3UTR-3UTR TCA 90 bp CCCGTTAGCACTAGGCAGCCCCGAGGTGTGTTGGCGGTGAGGCTGGTACAGGTCCTTTCGAGCTGCTGCTaGGCCTGGCTCTCTACTTCA +
Preference number: 2 (lower is better)
Translates to: PVSTRQPRGVLAVRLVQVLSSCC*AWLSTS
Trigger: TGAAGTAGAGAGCCAGGCTCAGCAGCAGCTCGAAAG...GACCTGTACCAGCCTCACCGCCAACACACCTCGGGGCTGCCTAGTGCTAACGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551544.5
3UTR-3UTR TCA 90 bp AGATCCTGTCCAGGCTTGGCGGGAGCTCTCGCTGGCCTCATCAGAGGGCATCAAAGCAGCTGCTGGTTCTaGAGTCCGGGGATGGCACTG +
Preference number: 2 (lower is better)
Translates to: RSCPGLAGALAGLIRGHQSSCWF*SPGMAL
Trigger: CAGTGCCATCCCCGGACTTCAGAACCAGCAGCTGCT...TTGATGCCCTCTGATGAGGCCAGCGAGAGCTCCCGCCAAGCCTGGACAGGATCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551544.5
3UTR-3UTR TCA 90 bp TTCCCCAAACCCCCATCCAGGTTGGCTCCCATCTGCCACTTGGCTTCACCATGCGAGGTGTGTTGGCGGTaGGGCTGGTACAGGTCCTGG +
Preference number: 2 (lower is better)
Translates to: FPKPPSRLAPICHLASPCEVCWR*GWYRSW
Trigger: CCAGGACCTGTACCAGCCTCACCGCCAACACACCTC...GCATGGTGAAGCCAAGTGGCAGATGGGAGCCAACCTGGATGGGGGTTTGGGGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000551544.5
3UTR-3UTR GCA 90 bp GGTGCAGAACACACAGCTAGTACCTGGAATGGGAGCCTAGTAGGGGTCACTGCCAGCTGCGCCTGTGCCTaGCAGGGTAGGGCAGCAGGA +
Preference number: 2 (lower is better)
Translates to: GAEHTASTWNGSLVGVTASCACA*QGRAAG
Trigger: TCCTGCTGCCCTACCCTGGCAGGCACAGGCGCAGCT...GGCAGTGACCCCTACTAGGCTCCCATTCCAGGTACTAGCTGTGTGTTCTGCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301050.7
ENST00000536187.6
ENST00000540990.5
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
3UTR-3UTR GCA 90 bp GCAGAACACACAGCTAGTACCTGGAATGGGAGCCTAGTAGGGGTCACTGCCCAGAGCTGCGCCTGTGCCTaGCAGGGTAGGGCAGCAGGA +
Preference number: 2 (lower is better)
Translates to: AEHTASTWNGSLVGVTAQSCACA*QGRAAG
Trigger: TCCTGCTGCCCTACCCTGGCAGGCACAGGCGCAGCT...CTGGGCAGTGACCCCTACTAGGCTCCCATTCCAGGTACTAGCTGTGTGTTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301050.7
ENST00000536187.6
ENST00000540990.5
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
3UTR-3UTR GCA 90 bp AGCCATAAGGCAAGAGTAGCCGGGGAGACAGGTCCTCTGTGCCCTGTCTCTCCCCGAGCGTGGCCAGCCTaGTGCTCCAGTCTTGGATGT +
Preference number: 2 (lower is better)
Translates to: SHKARVAGETGPLCPVSPRAWPA*CSSLGC
Trigger: ACATCCAAGACTGGAGCAGCAGGCTGGCCACGCTCG...GGGAGAGACAGGGCACAGAGGACCTGTCTCCCCGGCTACTCTTGCCTTATGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
3UTR-3UTR CCA 90 bp CCCCAAACCCCCATCCAGGTTGGCTCCCATCTGCCACTTGGCTTCACCATGCTCCTGCTGCTCCAGTCTTaGATGTGGCTGCCACACCCC +
Preference number: 2 (lower is better)
Translates to: PQTPIQVGSHLPLGFTMLLLLQS*MWLPHP
Trigger: GGGGTGTGGCAGCCACATCCAAGACTGGAGCAGCAG...GAGCATGGTGAAGCCAAGTGGCAGATGGGAGCCAACCTGGATGGGGGTTTGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
3UTR-3UTR CCA 90 bp CCCCAAACCCCCATCCAGGTTGGCTCCCATCTGCCACTTGGCTTCACCATGCTCGCACCACAGGCCGCATaGAGGGCACCACGTCATATG +
Preference number: 2 (lower is better)
Translates to: PQTPIQVGSHLPLGFTMLAPQAA*RAPRHM
Trigger: CATATGACGTGGTGCCCTCCATGCGGCCTGTGGTGC...GAGCATGGTGAAGCCAAGTGGCAGATGGGAGCCAACCTGGATGGGGGTTTGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000551544.5
3UTR-3UTR CCA 90 bp GCCCTCCTTCCCCAAACCCCCATCCAGGTTGGCTCCCATCTGCCACTTGGCTTCTCCAGAGCCCTGGACTaGGCACTCCTCATCCAGTAC +
Preference number: 2 (lower is better)
Translates to: ALLPQTPIQVGSHLPLGFSRALD*ALLIQY
Trigger: GTACTGGATGAGGAGTGCCCAGTCCAGGGCTCTGGA...GAAGCCAAGTGGCAGATGGGAGCCAACCTGGATGGGGGTTTGGGGAAGGAGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000551544.5
3UTR-3UTR TCA 90 bp AGGCCCTGGATGCCAAAGCAGTCCCTTGACTGTCAGGACTTGTGCCTGCTCAGGAGCCTAGTGCCAGCCTaGTGCCAGTCTAACGCCACC +
Preference number: 2 (lower is better)
Translates to: RPWMPKQSLDCQDLCLLRSLVPA*CQSNAT
Trigger: GGTGGCGTTAGACTGGCATCAGGCTGGCACTAGGCT...CCTGAGCAGGCACAAGTCCTGACAGTCAAGGGACTGCTTTGGCATCCAGGGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
3UTR-3UTR TCA 90 bp CTGCTCCAGTCTTGGATGTGGCTGCCACACCCCAGCAAACAGATGGGTGTGCCATGTATGGCAGTGAGGTaGCTGGAGGCCCTGGATGCC +
Preference number: 2 (lower is better)
Translates to: LLQSWMWLPHPSKQMGVPCMAVR*LEALDA
Trigger: GGCATCCAGGGCCTCCAGTCACCTCACTGCCATACA...TGGCACACCCATCTGTTTGCTGGGGTGTGGCAGCCACATCCAAGACTGGAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
3UTR-3UTR TCA 90 bp TTCCCCAAACCCCCATCCAGGTTGGCTCCCATCTGCCACTTGGCTTCACCATGCCAAGAGCTTCAGCTGTaGGCTCTCTCTGGCCCGAGC +
Preference number: 2 (lower is better)
Translates to: FPKPPSRLAPICHLASPCQELQL*ALSGPS
Trigger: GCTCGGGCCAGAGAGAGCTCACAGCTGAAGCTCTTG...GCATGGTGAAGCCAAGTGGCAGATGGGAGCCAACCTGGATGGGGGTTTGGGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
3UTR-3UTR TCA 90 bp AGGCCCTGGATGCCAAAGCAGTCCCTTGACTGTCAGGACTTGTGCCTGCTCAGGCAAGAGCTTCAGCTGTaGGCTCTCTCTGGCCCGAGC +
Preference number: 2 (lower is better)
Translates to: RPWMPKQSLDCQDLCLLRQELQL*ALSGPS
Trigger: GCTCGGGCCAGAGAGAGCTCACAGCTGAAGCTCTTG...CCTGAGCAGGCACAAGTCCTGACAGTCAAGGGACTGCTTTGGCATCCAGGGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
3UTR-3UTR GCA 90 bp GCCCTCCTTCCCCAAACCCCCATCCAGGTTGGCTCCCATCTGCCACTTGGCTTCTTCCTCATGCCATGGTaGCCACACCCCACCCTTTTG +
Preference number: 2 (lower is better)
Translates to: ALLPQTPIQVGSHLPLGFFLMPW*PHPTLL
Trigger: CAAAAGGGTGGGGTGTGGGCACCATGGCATGAGGAA...GAAGCCAAGTGGCAGATGGGAGCCAACCTGGATGGGGGTTTGGGGAAGGAGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
3UTR-3UTR GCA 90 bp CTGCTCCAGTCTTGGATGTGGCTGCCACACCCCAGCAAACAGATGGGTGTGCCACGAGCGTGGCCAGCCTaGTGCTCCAGTCTTGGATGT +
Preference number: 2 (lower is better)
Translates to: LLQSWMWLPHPSKQMGVPRAWPA*CSSLGC
Trigger: ACATCCAAGACTGGAGCAGCAGGCTGGCCACGCTCG...TGGCACACCCATCTGTTTGCTGGGGTGTGGCAGCCACATCCAAGACTGGAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
3UTR-3UTR CCA 90 bp AGCCATAAGGCAAGAGTAGCCGGGGAGACAGGTCCTCTGTGCCCTGTCTCTCCCGGTGACTGGAGGCCCTaGATGCCAAAGCAGTCCCTT +
Preference number: 2 (lower is better)
Translates to: SHKARVAGETGPLCPVSPGDWRP*MPKQSL
Trigger: AAGGGACTGCTTTGGCATCCAGGGCCTCCAGTCACC...GGGAGAGACAGGGCACAGAGGACCTGTCTCCCCGGCTACTCTTGCCTTATGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
3UTR CAA 90 bp CCCTCCTTCCCCAAACCCCCATCCAGGTTGGCTCCCATCTGCCACTaGGCTTCACCATGCTCCTGGTCCCTGGTCCTGTCACATGTTAAG +
Preference number: 2 (lower is better)
Translates to: PSFPKPPSRLAPICH*ASPCSWSLVLSHVK
Trigger: CTTAACATGTGACAGGACCAGGGACCAGGAGCATGGTGAAGCCAAGTGGCAGATGGGAGCCAACCTGGATGGGGGTTTGGGGAAGGAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
3UTR CAA 90 bp TGCTTTTGCTTCTGCTTGGCTAGAGATGGCGGAGGGGAGCGTCGGTaGCCAATGTCACTCAGGCTGGAAGGGTTCCCAGATCTCCTGGCC +
Preference number: 2 (lower is better)
Translates to: CFCFCLARDGGGERR*PMSLRLEGFPDLLA
Trigger: GGCCAGGAGATCTGGGAACCCTTCCAGCCTGAGTGACATTGGCAACCGACGCTCCCCTCCGCCATCTCTAGCCAAGCAGAAGCAAAAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551544.5
3UTR-3UTR TCA 90 bp GCAGAACACACAGCTAGTACCTGGAATGGGAGCCTAGTAGGGGTCACTGCCCAGAGCCTAGTGCCAGCCTaGTGCCAGTCTAACGCCACC +
Preference number: 2 (lower is better)
Translates to: AEHTASTWNGSLVGVTAQSLVPA*CQSNAT
Trigger: GGTGGCGTTAGACTGGCATCAGGCTGGCACTAGGCT...CTGGGCAGTGACCCCTACTAGGCTCCCATTCCAGGTACTAGCTGTGTGTTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301050.7
ENST00000536187.6
ENST00000540990.5
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
3UTR-3UTR TCA 90 bp AGCCATAAGGCAAGAGTAGCCGGGGAGACAGGTCCTCTGTGCCCTGTCTCTCCCGCCAAAGCAGTCCCTTaGCTGTCAGGACTTGTGCCT +
Preference number: 2 (lower is better)
Translates to: SHKARVAGETGPLCPVSPAKAVP*LSGLVP
Trigger: AGGCACAAGTCCTGACAGTCAAGGGACTGCTTTGGC...GGGAGAGACAGGGCACAGAGGACCTGTCTCCCCGGCTACTCTTGCCTTATGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
3UTR-3UTR GCA 90 bp GTCACTTTAATGGGGCATCCCTTCCCTGAGTCTGGTGGGAAGGACCCTGCTAAGCCTAGTAGGGGTCACTaGCCAGGAGGTGAGGGGGTC +
Preference number: 2 (lower is better)
Translates to: VTLMGHPFPESGGKDPAKPSRGH*PGGEGV
Trigger: GACCCCCTCACCTCCTGGGCAGTGACCCCTACTAGG...CTTAGCAGGGTCCTTCCCACCAGACTCAGGGAAGGGATGCCCCATTAAAGTGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
3UTR-3UTR CCA 90 bp CTAACAAGCGGCAGCTATGAGTCAGGGAACAAAGTCTGGAGCCCGGTTCTCCAAGAGGGCACTGCCCAGTaGGGCAGCTTCCTGTGTGGG +
Preference number: 2 (lower is better)
Translates to: LTSGSYESGNKVWSPVLQEGTAQ*GSFLCG
Trigger: CCCACACAGGAAGCTGCCCCACTGGGCAGTGCCCTC...TTGGAGAACCGGGCTCCAGACTTTGTTCCCTGACTCATAGCTGCCGCTTGTTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
3UTR-3UTR CCA 90 bp ACATGCCCTCCTTCCCCAAACCCCCATCCAGGTTGGCTCCCATCTGCCACTTGGTTCTTCCTCATGCCATaGTGCCCACACCCCACCCTT +
Preference number: 2 (lower is better)
Translates to: TCPPSPNPHPGWLPSATWFFLMP*CPHPTL
Trigger: AAGGGTGGGGTGTGGGCACCATGGCATGAGGAAGAA...CCAAGTGGCAGATGGGAGCCAACCTGGATGGGGGTTTGGGGAAGGAGGGCATGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
3UTR-3UTR CCA 90 bp GGAGGGGAGCGTCGGTTGCCAATGTCACTCAGGCTGGAAGGGTTCCCAGATCTCCTCCAGTCTTGGATGTaGCTGCCACACCCCAGCAAA +
Preference number: 2 (lower is better)
Translates to: GGERRLPMSLRLEGFPDLLQSWM*LPHPSK
Trigger: TTTGCTGGGGTGTGGCAGCCACATCCAAGACTGGAG...GAGATCTGGGAACCCTTCCAGCCTGAGTGACATTGGCAACCGACGCTCCCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551544.5
3UTR-3UTR CCA 90 bp AGCCATAAGGCAAGAGTAGCCGGGGAGACAGGTCCTCTGTGCCCTGTCTCTCCCCAGTTCCGGTCACTGTaGTTGTGCTCTGAGTCCTGG +
Preference number: 2 (lower is better)
Translates to: SHKARVAGETGPLCPVSPQFRSL*LCSESW
Trigger: CCAGGACTCAGAGCACAACCACAGTGACCGGAACTG...GGGAGAGACAGGGCACAGAGGACCTGTCTCCCCGGCTACTCTTGCCTTATGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551544.5
3UTR-3UTR TCA 90 bp GACCTTGTTTCTTCCTCATGCCATGGTGCCCACACCCCACCCTTTTGTCACTTTGGGGCATCCCTTCCCTaGGTCTGGTGGGAAGGACCC +
Preference number: 2 (lower is better)
Translates to: DLVSSSCHGAHTPPFCHFGASLP*VWWEGP
Trigger: GGGTCCTTCCCACCAGACTCAGGGAAGGGATGCCCC...AAAGTGACAAAAGGGTGGGGTGTGGGCACCATGGCATGAGGAAGAAACAAGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
3UTR-3UTR TCA 90 bp GGATGCCAAAGCAGTCCCTTGACTGTCAGGACTTGTGCCTGCTCAGGGACCTTGACTCTCCCTGCTGTCTaGGCTCCGGGAATCACTGCT +
Preference number: 2 (lower is better)
Translates to: GCQSSPLTVRTCACSGTLTLPAV*APGITA
Trigger: AGCAGTGATTCCCGGAGCTCAGACAGCAGGGAGAGT...CAAGGTCCCTGAGCAGGCACAAGTCCTGACAGTCAAGGGACTGCTTTGGCATCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551544.5
3UTR-3UTR GCA 90 bp GACCTTGTTTCTTCCTCATGCCATGGTGCCCACACCCCACCCTTTTGTCACTTTAGCTGCGCCTGTGCCTaGCAGGGTAGGGCAGCAGGA +
Preference number: 2 (lower is better)
Translates to: DLVSSSCHGAHTPPFCHFSCACA*QGRAAG
Trigger: TCCTGCTGCCCTACCCTGGCAGGCACAGGCGCAGCT...AAAGTGACAAAAGGGTGGGGTGTGGGCACCATGGCATGAGGAAGAAACAAGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
3UTR-3UTR GCA 90 bp CCTTTTGTCACTTTAATGGGGCATCCCTTCCCTGAGTCTGGTGGGAAGGACCCTCCTAGTAGGGGTCACTaGCCAGGAGGTGAGGGGGTC +
Preference number: 2 (lower is better)
Translates to: PFVTLMGHPFPESGGKDPPSRGH*PGGEGV
Trigger: GACCCCCTCACCTCCTGGGCAGTGACCCCTACTAGG...AGGGTCCTTCCCACCAGACTCAGGGAAGGGATGCCCCATTAAAGTGACAAAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
3UTR-3UTR GCA 90 bp TGCTCCAGTCTTGGATGTGGCTGCCACACCCCAGCAAACAGATGGGTGTGCCACTTCCTCATGCCATGGTaGCCACACCCCACCCTTTTG +
Preference number: 2 (lower is better)
Translates to: CSSLGCGCHTPANRWVCHFLMPW*PHPTLL
Trigger: CAAAAGGGTGGGGTGTGGGCACCATGGCATGAGGAA...GTGGCACACCCATCTGTTTGCTGGGGTGTGGCAGCCACATCCAAGACTGGAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
3UTR-3UTR GCA 90 bp TTCCCCAAACCCCCATCCAGGTTGGCTCCCATCTGCCACTTGGCTTCACCATGCGTTCTCTGCTACACATaGCCTCCTTCCCCAAACCCC +
Preference number: 2 (lower is better)
Translates to: FPKPPSRLAPICHLASPCVLCYT*PPSPNP
Trigger: GGGGTTTGGGGAAGGAGGGCATGTGTAGCAGAGAAC...GCATGGTGAAGCCAAGTGGCAGATGGGAGCCAACCTGGATGGGGGTTTGGGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
3UTR-3UTR GCA 90 bp CTGCTCCAGTCTTGGATGTGGCTGCCACACCCCAGCAAACAGATGGGTGTGCCAGAGACAGGTCCTCTGTaGCCTGTCTCTCCCCATCTA +
Preference number: 2 (lower is better)
Translates to: LLQSWMWLPHPSKQMGVPETGPL*PVSPHL
Trigger: TAGATGGGGAGAGACAGGGCACAGAGGACCTGTCTC...TGGCACACCCATCTGTTTGCTGGGGTGTGGCAGCCACATCCAAGACTGGAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
3UTR-3UTR GCA 90 bp ATCTGTACGGTCAGGTGCTTCATCTGTGACTTCCCCCGGGAGCGAATGAGACGCTCCAGGCACTCTCCCTaGTGTCTGAGCTCCGGGAAT +
Preference number: 2 (lower is better)
Translates to: ICTVRCFICDFPRERMRRSRHSP*CLSSGN
Trigger: ATTCCCGGAGCTCAGACAGCAGGGAGAGTGCCTGGA...GCGTCTCATTCGCTCCCGGGGGAAGTCACAGATGAAGCACCTGACCGTACAGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000551544.5
3UTR-3UTR CCA 90 bp CGGTGGGCACTGAACCAGCTTATCATATGCCATCATCTGTACGGTCAGGTGCTTGAGGGCACTGCCCAGTaGGGCAGCTTCCTGTGTGGG +
Preference number: 2 (lower is better)
Translates to: RWALNQLIICHHLYGQVLEGTAQ*GSFLCG
Trigger: CCCACACAGGAAGCTGCCCCACTGGGCAGTGCCCTC...AAGCACCTGACCGTACAGATGATGGCATATGATAAGCTGGTTCAGTGCCCACCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551544.5
3UTR-3UTR CCA 90 bp AGGCCCTGGATGCCAAAGCAGTCCCTTGACTGTCAGGACTTGTGCCTGCTCAGGGCTTCACCATGCTCCTaGTCCCTGGTCCTGTCACAT +
Preference number: 2 (lower is better)
Translates to: RPWMPKQSLDCQDLCLLRASPCS*SLVLSH
Trigger: ATGTGACAGGACCAGGGACCAGGAGCATGGTGAAGC...CCTGAGCAGGCACAAGTCCTGACAGTCAAGGGACTGCTTTGGCATCCAGGGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
3UTR-3UTR CCA 90 bp TTCCCCAAACCCCCATCCAGGTTGGCTCCCATCTGCCACTTGGCTTCACCATGCCTCCCATCTGCCACTTaGCTTCACCATGCTCCTGGT +
Preference number: 2 (lower is better)
Translates to: FPKPPSRLAPICHLASPCLPSAT*LHHAPG
Trigger: ACCAGGAGCATGGTGAAGCCAAGTGGCAGATGGGAG...GCATGGTGAAGCCAAGTGGCAGATGGGAGCCAACCTGGATGGGGGTTTGGGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
3UTR-3UTR CCA 90 bp GCCCTCCTTCCCCAAACCCCCATCCAGGTTGGCTCCCATCTGCCACTTGGCTTCTCAGGGAACAAAGTCTaGAGCCCGGTTCTCCAAAGA +
Preference number: 2 (lower is better)
Translates to: ALLPQTPIQVGSHLPLGFSGNKV*SPVLQR
Trigger: TCTTTGGAGAACCGGGCTCCAGACTTTGTTCCCTGA...GAAGCCAAGTGGCAGATGGGAGCCAACCTGGATGGGGGTTTGGGGAAGGAGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
3UTR-3UTR CCA 90 bp CCGGTGGGCACTGAACCAGCTTATCATATGCCATCATCTGTACGGTCAGGTGCTGCACTTCCGCAATGCTaGAGCGGGCAGAGGAGCGCT +
Preference number: 2 (lower is better)
Translates to: PVGTEPAYHMPSSVRSGAALPQC*SGQRSA
Trigger: AGCGCTCCTCTGCCCGCTCCAGCATTGCGGAAGTGC...AGCACCTGACCGTACAGATGATGGCATATGATAAGCTGGTTCAGTGCCCACCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551544.5
3UTR-3UTR TCA 90 bp CCTTTTGTCACTTTAATGGGGCATCCCTTCCCTGAGTCTGGTGGGAAGGACCCTAGCCTAGTGCCAGCCTaGTGCCAGTCTAACGCCACC +
Preference number: 2 (lower is better)
Translates to: PFVTLMGHPFPESGGKDPSLVPA*CQSNAT
Trigger: GGTGGCGTTAGACTGGCATCAGGCTGGCACTAGGCT...AGGGTCCTTCCCACCAGACTCAGGGAAGGGATGCCCCATTAAAGTGACAAAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
3UTR-3UTR GCA 90 bp GGCAGCTATGAGTCAGGGAACAAAGTCTGGAGCCCGGTTCTCCAAAGATGTATGCCTAGTAGGGGTCACTaGCCAGGAGGTGAGGGGGTC +
Preference number: 2 (lower is better)
Translates to: GSYESGNKVWSPVLQRCMPSRGH*PGGEGV
Trigger: GACCCCCTCACCTCCTGGGCAGTGACCCCTACTAGG...CATACATCTTTGGAGAACCGGGCTCCAGACTTTGTTCCCTGACTCATAGCTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
3UTR-3UTR GCA 90 bp ATCTGTACGGTCAGGTGCTTCATCTGTGACTTCCCCCGGGAGCGAATGAGACGCGCTGCTCCGCATTCTTaGCCCATCTTTCCAGGCACT +
Preference number: 2 (lower is better)
Translates to: ICTVRCFICDFPRERMRRAAPHS*PIFPGT
Trigger: AGTGCCTGGAAAGATGGGGCAAGAATGCGGAGCAGC...GCGTCTCATTCGCTCCCGGGGGAAGTCACAGATGAAGCACCTGACCGTACAGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000551544.5
3UTR-3UTR GCA 90 bp AGCCATAAGGCAAGAGTAGCCGGGGAGACAGGTCCTCTGTGCCCTGTCTCTCCCATCTGTACGGTCAGGTaGTTCATCTGTGACTTCCCC +
Preference number: 2 (lower is better)
Translates to: SHKARVAGETGPLCPVSPICTVR*FICDFP
Trigger: GGGGAAGTCACAGATGAAGCACCTGACCGTACAGAT...GGGAGAGACAGGGCACAGAGGACCTGTCTCCCCGGCTACTCTTGCCTTATGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551544.5
3UTR-3UTR CCA 90 bp GTGCCCTGTCTCTCCCCATCTAACCCTAACCTAACAAGCGGCAGCTATGAGTCACTGCTGCTCCAGTCTTaGATGTGGCTGCCACACCCC +
Preference number: 2 (lower is better)
Translates to: VPCLSPSNPNLTSGSYESLLLQS*MWLPHP
Trigger: GGGGTGTGGCAGCCACATCCAAGACTGGAGCAGCAG...TGACTCATAGCTGCCGCTTGTTAGGTTAGGGTTAGATGGGGAGAGACAGGGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
3UTR-3UTR CCA 90 bp CTAACAAGCGGCAGCTATGAGTCAGGGAACAAAGTCTGGAGCCCGGTTCTCCAACTGCTGCTCCAGTCTTaGATGTGGCTGCCACACCCC +
Preference number: 2 (lower is better)
Translates to: LTSGSYESGNKVWSPVLQLLLQS*MWLPHP
Trigger: GGGGTGTGGCAGCCACATCCAAGACTGGAGCAGCAG...TTGGAGAACCGGGCTCCAGACTTTGTTCCCTGACTCATAGCTGCCGCTTGTTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
3UTR CAA 90 bp CAAAGCAGTCCCTTGACTGTCAGGACTTGTGCCTGCTCAGGGACCTaGTTTCTTCCTCATGCCATGGTGCCCACACCCCACCCTTTTGTC +
Preference number: 2 (lower is better)
Translates to: QSSPLTVRTCACSGT*FLPHAMVPTPHPFV
Trigger: GACAAAAGGGTGGGGTGTGGGCACCATGGCATGAGGAAGAAACAAGGTCCCTGAGCAGGCACAAGTCCTGACAGTCAAGGGACTGCTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
3UTR CAA 90 bp TATGGCAGTGAGGTGACTGGAGGCCCTGGATGCCAAAGCAGTCCCTaGACTGTCAGGACTTGTGCCTGCTCAGGGACCTTGTTTCTTCCT +
Preference number: 2 (lower is better)
Translates to: YGSEVTGGPGCQSSP*TVRTCACSGTLFLP
Trigger: AGGAAGAAACAAGGTCCCTGAGCAGGCACAAGTCCTGACAGTCAAGGGACTGCTTTGGCATCCAGGGCCTCCAGTCACCTCACTGCCATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
3UTR-3UTR TCA 90 bp CTGCTCCAGTCTTGGATGTGGCTGCCACACCCCAGCAAACAGATGGGTGTGCCAAACAAGCGGCAGCTATaGGTCAGGGAACAAAGTCTG +
Preference number: 2 (lower is better)
Translates to: LLQSWMWLPHPSKQMGVPNKRQL*VREQSL
Trigger: CAGACTTTGTTCCCTGACTCATAGCTGCCGCTTGTT...TGGCACACCCATCTGTTTGCTGGGGTGTGGCAGCCACATCCAAGACTGGAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
3UTR-3UTR GCA 90 bp TGCTCCAGTCTTGGATGTGGCTGCCACACCCCAGCAAACAGATGGGTGTGCCACGTCAGGACTTGTGCCTaGTCAGGGACCTTGTTTCTT +
Preference number: 2 (lower is better)
Translates to: CSSLGCGCHTPANRWVCHVRTCA*SGTLFL
Trigger: AAGAAACAAGGTCCCTGAGCAGGCACAAGTCCTGAC...GTGGCACACCCATCTGTTTGCTGGGGTGTGGCAGCCACATCCAAGACTGGAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
3UTR-3UTR TCA 90 bp GTGCCCTGTCTCTCCCCATCTAACCCTAACCTAACAAGCGGCAGCTATGAGTCAGCCAAAGCAGTCCCTTaGCTGTCAGGACTTGTGCCT +
Preference number: 2 (lower is better)
Translates to: VPCLSPSNPNLTSGSYESAKAVP*LSGLVP
Trigger: AGGCACAAGTCCTGACAGTCAAGGGACTGCTTTGGC...TGACTCATAGCTGCCGCTTGTTAGGTTAGGGTTAGATGGGGAGAGACAGGGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
3UTR-3UTR GCA 90 bp TTAATGGGGCATCCCTTCCCTGAGTCTGGTGGGAAGGACCCTGCTAAGGGGATCGTCAGGACTTGTGCCTaGTCAGGGACCTTGTTTCTT +
Preference number: 2 (lower is better)
Translates to: LMGHPFPESGGKDPAKGIVRTCA*SGTLFL
Trigger: AAGAAACAAGGTCCCTGAGCAGGCACAAGTCCTGAC...GATCCCCTTAGCAGGGTCCTTCCCACCAGACTCAGGGAAGGGATGCCCCATTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
3UTR-3UTR GCA 90 bp GGCAGCTATGAGTCAGGGAACAAAGTCTGGAGCCCGGTTCTCCAAAGATGTATGCACTTGGCTTCACCATaGTCCTGGTCCCTGGTCCTG +
Preference number: 2 (lower is better)
Translates to: GSYESGNKVWSPVLQRCMHLASP*SWSLVL
Trigger: CAGGACCAGGGACCAGGAGCATGGTGAAGCCAAGTG...CATACATCTTTGGAGAACCGGGCTCCAGACTTTGTTCCCTGACTCATAGCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
3UTR-3UTR CCA 90 bp CCGGTGGGCACTGAACCAGCTTATCATATGCCATCATCTGTACGGTCAGGTGCTTTCTTCCTCATGCCATaGTGCCCACACCCCACCCTT +
Preference number: 2 (lower is better)
Translates to: PVGTEPAYHMPSSVRSGAFFLMP*CPHPTL
Trigger: AAGGGTGGGGTGTGGGCACCATGGCATGAGGAAGAA...AGCACCTGACCGTACAGATGATGGCATATGATAAGCTGGTTCAGTGCCCACCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551544.5
3UTR-3UTR CCA 90 bp CTAACAAGCGGCAGCTATGAGTCAGGGAACAAAGTCTGGAGCCCGGTTCTCCAACTCCAGTCTTGGATGTaGCTGCCACACCCCAGCAAA +
Preference number: 2 (lower is better)
Translates to: LTSGSYESGNKVWSPVLQLQSWM*LPHPSK
Trigger: TTTGCTGGGGTGTGGCAGCCACATCCAAGACTGGAG...TTGGAGAACCGGGCTCCAGACTTTGTTCCCTGACTCATAGCTGCCGCTTGTTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
3UTR-3UTR CCA 90 bp GTGCCCTGTCTCTCCCCATCTAACCCTAACCTAACAAGCGGCAGCTATGAGTCACTCCCATCTGCCACTTaGCTTCACCATGCTCCTGGT +
Preference number: 2 (lower is better)
Translates to: VPCLSPSNPNLTSGSYESLPSAT*LHHAPG
Trigger: ACCAGGAGCATGGTGAAGCCAAGTGGCAGATGGGAG...TGACTCATAGCTGCCGCTTGTTAGGTTAGGGTTAGATGGGGAGAGACAGGGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
3UTR-3UTR CCA 90 bp GGCAGCTATGAGTCAGGGAACAAAGTCTGGAGCCCGGTTCTCCAAAGATGTATGAACCCCCATCCAGGTTaGCTCCCATCTGCCACTTGG +
Preference number: 2 (lower is better)
Translates to: GSYESGNKVWSPVLQRCMNPHPG*LPSATW
Trigger: CCAAGTGGCAGATGGGAGCCAACCTGGATGGGGGTT...CATACATCTTTGGAGAACCGGGCTCCAGACTTTGTTCCCTGACTCATAGCTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
3UTR-3UTR CCA 90 bp CCAAAGCAGTCCCTTGACTGTCAGGACTTGTGCCTGCTCAGGGACCTTGTTTCTCCACAGGTTTGTGCTTaGCCCTTTCGAGCTGCTGCT +
Preference number: 2 (lower is better)
Translates to: PKQSLDCQDLCLLRDLVSPQVCA*PFRAAA
Trigger: AGCAGCAGCTCGAAAGGGCCAAGCACAAACCTGTGG...AGAAACAAGGTCCCTGAGCAGGCACAAGTCCTGACAGTCAAGGGACTGCTTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551544.5
3UTR-3UTR TCA 90 bp TTAATGGGGCATCCCTTCCCTGAGTCTGGTGGGAAGGACCCTGCTAAGGGGATCGGACAAGAACAGAAATaGCAGGATGCAGGGCAAAAG +
Preference number: 2 (lower is better)
Translates to: LMGHPFPESGGKDPAKGIGQEQK*QDAGQK
Trigger: CTTTTGCCCTGCATCCTGTCATTTCTGTTCTTGTCC...GATCCCCTTAGCAGGGTCCTTCCCACCAGACTCAGGGAAGGGATGCCCCATTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
3UTR-3UTR TCA 90 bp CCGGTGGGCACTGAACCAGCTTATCATATGCCATCATCTGTACGGTCAGGTGCTTCTTGCCCGGATTGTTaGGCACAGATCGCTTTGCCA +
Preference number: 2 (lower is better)
Translates to: PVGTEPAYHMPSSVRSGASCPDC*AQIALP
Trigger: TGGCAAAGCGATCTGTGCTCAACAATCCGGGCAAGA...AGCACCTGACCGTACAGATGATGGCATATGATAAGCTGGTTCAGTGCCCACCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551544.5
3UTR-3UTR GCA 90 bp AACACTACTAGCTGCAGGGATTTGGCCAGCTCAAATATGCGCTCGATCTCACTCGAGCACAGATCGCTTTaGCAGGGAGAGGTCGGCTGT +
Preference number: 2 (lower is better)
Translates to: NTTSCRDLASSNMRSISLEHRSL*QGEVGC
Trigger: ACAGCCGACCTCTCCCTGGCAAAGCGATCTGTGCTC...GAGTGAGATCGAGCGCATATTTGAGCTGGCCAAATCCCTGCAGCTAGTAGTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000550483.5
ENST00000551544.5
3UTR-3UTR TCA 90 bp GCATTCATCGAAGCCAATGCTGGAGCGGGCAGAGGAGCGCTCAATGATGGTCCTTCTGCATCATGTCTGTaGCCTCATAACCTTTCAGAG +
Preference number: 2 (lower is better)
Translates to: AFIEANAGAGRGALNDGPSASCL*PHNLSE
Trigger: CTCTGAAAGGTTATGAGGTCACAGACATGATGCAGA...AGGACCATCATTGAGCGCTCCTCTGCCCGCTCCAGCATTGGCTTCGATGAATGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550483.5
3UTR-3UTR TCA 90 bp TTGTTGAGCACAGATCGCTTTGCCAGGGAGAGGTCGGCTGTGACTCGGGTGATGCATCAAATCTGTGTTTaGGGAAGTCGAAGAGAGCCT +
Preference number: 2 (lower is better)
Translates to: LLSTDRFARERSAVTRVMHQICV*GSRREP
Trigger: AGGCTCTCTTCGACTTCCTCAAACACAGATTTGATG...CATCACCCGAGTCACAGCCGACCTCTCCCTGGCAAAGCGATCTGTGCTCAACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000550391.5
ENST00000550483.5
ENST00000551544.5
3UTR-3UTR TCA 90 bp TGGACAGGAAGGAATTGGAGGAAAAGGGCATTCATCGAAGCCAATGCTGGAGCGTCTTGCCCGGATTGTTaGGCACAGATCGCTTTGCCA +
Preference number: 2 (lower is better)
Translates to: WTGRNWRKRAFIEANAGASCPDC*AQIALP
Trigger: TGGCAAAGCGATCTGTGCTCAACAATCCGGGCAAGA...CGCTCCAGCATTGGCTTCGATGAATGCCCTTTTCCTCCAATTCCTTCCTGTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550483.5
3UTR-3UTR TCA 90 bp CTAACAAGCGGCAGCTATGAGTCAGGGAACAAAGTCTGGAGCCCGGTTCTCCAAGGACAAGAACAGAAATaGCAGGATGCAGGGCAAAAG +
Preference number: 2 (lower is better)
Translates to: LTSGSYESGNKVWSPVLQGQEQK*QDAGQK
Trigger: CTTTTGCCCTGCATCCTGTCATTTCTGTTCTTGTCC...TTGGAGAACCGGGCTCCAGACTTTGTTCCCTGACTCATAGCTGCCGCTTGTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
3UTR-3UTR TCA 90 bp CCAAAGCAGTCCCTTGACTGTCAGGACTTGTGCCTGCTCAGGGACCTTGTTTCTCACTGCTTAATGAGCTaGTTTGTCTCAGTGGGTCAG +
Preference number: 2 (lower is better)
Translates to: PKQSLDCQDLCLLRDLVSHCLMS*FVSVGQ
Trigger: CTGACCCACTGAGACAAATCAGCTCATTAAGCAGTG...AGAAACAAGGTCCCTGAGCAGGCACAAGTCCTGACAGTCAAGGGACTGCTTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551544.5
3UTR-3UTR TCA 90 bp GTGCCCTGTCTCTCCCCATCTAACCCTAACCTAACAAGCGGCAGCTATGAGTCATCTGCATCATGTCTGTaGCCTCATAACCTTTCAGAG +
Preference number: 2 (lower is better)
Translates to: VPCLSPSNPNLTSGSYESSASCL*PHNLSE
Trigger: CTCTGAAAGGTTATGAGGTCACAGACATGATGCAGA...TGACTCATAGCTGCCGCTTGTTAGGTTAGGGTTAGATGGGGAGAGACAGGGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551544.5
3UTR-3UTR TCA 90 bp AACACTACTAGCTGCAGGGATTTGGCCAGCTCAAATATGCGCTCGATCTCACTCCTGAACCAGGACATTTaGGGGAAAGTTGTCAGCTCC +
Preference number: 2 (lower is better)
Translates to: NTTSCRDLASSNMRSISLLNQDI*GKVVSS
Trigger: GGAGCTGACAACTTTCCCTCAAATGTCCTGGTTCAG...GAGTGAGATCGAGCGCATATTTGAGCTGGCCAAATCCCTGCAGCTAGTAGTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551544.5
3UTR-3UTR TCA 90 bp TGGTGGACAGGAAGGAATTGGAGGAAAAGGGCATTCATCGAAGCCAATGCTGGACATCAAATCTGTGTTTaGGGAAGTCGAAGAGAGCCT +
Preference number: 2 (lower is better)
Translates to: WWTGRNWRKRAFIEANAGHQICV*GSRREP
Trigger: AGGCTCTCTTCGACTTCCTCAAACACAGATTTGATG...TCCAGCATTGGCTTCGATGAATGCCCTTTTCCTCCAATTCCTTCCTGTCCACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550483.5
3UTR CCA 72 bp GGCACTGGGAGGACCCAGAAGTCCGGGGCCAGGGGCTaGGTGGTGCGTGGCCCGCCAGTAAACCTCCAGGTA +
Preference number: 3 (lower is better)
Translates to: GTGRTQKSGARG*VVRGPPVNLQV
Trigger: TACCTGGAGGTTTACTGGCGGGCCACGCACCACCCAGCCCCTGGCCCCGGACTTCTGGGTCCTCCCAGTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551544.5
3UTR-3UTR CAA 90 bp TACCTGGAATGGGAGCCTAGTAGGGGTCACTGCCCAGGAGGTGAGGGGGTCCCCGCTGGGCAGGGGGTTTaGGGGGCTGAGCCTAGTGCC +
Preference number: 3 (lower is better)
Translates to: YLEWEPSRGHCPGGEGVPAGQGV*GAEPSA
Trigger: GGCACTAGGCTCAGCCCCCAAAACCCCCTGCCCAGC...GGGGACCCCCTCACCTCCTGGGCAGTGACCCCTACTAGGCTCCCATTCCAGGTA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 23 nt.
Matches the following 6 transcripts:
ENST00000301050.7
ENST00000536187.6
ENST00000540990.5
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
3UTR-3UTR CAA 90 bp CCAGGAGGTGAGGGGGTCCCCTGTTTCTCCCAGAACCTTGGGACCACAGGCAGCGCTGGGCAGGGGGTTTaGGGGGCTGAGCCTAGTGCC +
Preference number: 3 (lower is better)
Translates to: PGGEGVPCFSQNLGTTGSAGQGV*GAEPSA
Trigger: GGCACTAGGCTCAGCCCCCAAAACCCCCTGCCCAGC...GCTGCCTGTGGTCCCAAGGTTCTGGGAGAAACAGGGGACCCCCTCACCTCCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 6 transcripts:
ENST00000301050.7
ENST00000536187.6
ENST00000540990.5
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
3UTR-3UTR CAA 90 bp TGGGGCATCCCTTCCCTGAGTCTGGTGGGAAGGACCCTGCTAAGGGGATCCTGGGCTGGGCAGGGGGTTTaGGGGGCTGAGCCTAGTGCC +
Preference number: 3 (lower is better)
Translates to: WGIPSLSLVGRTLLRGSWAGQGV*GAEPSA
Trigger: GGCACTAGGCTCAGCCCCCAAAACCCCCTGCCCAGC...CCAGGATCCCCTTAGCAGGGTCCTTCCCACCAGACTCAGGGAAGGGATGCCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
3UTR GCA 72 bp AGCTGTGAGCTCTCTCTGGCCCGAGCGTGGCCAGCCTaGTGCTCCAGTCTTGGATGTGGCTGCCACACCCCA +
Preference number: 3 (lower is better)
Translates to: SCELSLARAWPA*CSSLGCGCHTP
Trigger: TGGGGTGTGGCAGCCACATCCAAGACTGGAGCAGCAGGCTGGCCACGCTCGGGCCAGAGAGAGCTCACAGCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
3UTR-3UTR CAA 90 bp CCCCAAACCCCCATCCAGGTTGGCTCCCATCTGCCACTTGGCTTCACCATGCTCGCTGGGCAGGGGGTTTaGGGGGCTGAGCCTAGTGCC +
Preference number: 3 (lower is better)
Translates to: PQTPIQVGSHLPLGFTMLAGQGV*GAEPSA
Trigger: GGCACTAGGCTCAGCCCCCAAAACCCCCTGCCCAGC...GAGCATGGTGAAGCCAAGTGGCAGATGGGAGCCAACCTGGATGGGGGTTTGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
3UTR-3UTR CAA 90 bp CCCCAGCAGCTGCTGGTTCTGAAGTCCGGGGATGGCACTGGGAGGACCCAGAAGGGAGGGGAGCGTCGGTaGCCAATGTCACTCAGGCTG +
Preference number: 3 (lower is better)
Translates to: PQQLLVLKSGDGTGRTQKGGERR*PMSLRL
Trigger: CAGCCTGAGTGACATTGGCAACCGACGCTCCCCTCC...CTTCTGGGTCCTCCCAGTGCCATCCCCGGACTTCAGAACCAGCAGCTGCTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000551544.5
3UTR GCA 72 bp GCGTGGCCAGCCTGCTGCTCCAGTCTTGGATGTGGCTaGCACACCCCAGCAAACAGATGGGTGTGCCACCCT +
Preference number: 3 (lower is better)
Translates to: AWPACCSSLGCG*HTPANRWVCHP
Trigger: AGGGTGGCACACCCATCTGTTTGCTGGGGTGTGGCAGCCACATCCAAGACTGGAGCAGCAGGCTGGCCACGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
3UTR CCA 72 bp CCGAGCGTGGCCAGCCTGCTGCTCCAGTCTTGGATGTaGCTGCCACACCCCAGCAAACAGATGGGTGTGCCA +
Preference number: 3 (lower is better)
Translates to: PSVASLLLQSWM*LPHPSKQMGVP
Trigger: TGGCACACCCATCTGTTTGCTGGGGTGTGGCAGCCACATCCAAGACTGGAGCAGCAGGCTGGCCACGCTCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
3UTR CCA 72 bp TCTGGCCCGAGCGTGGCCAGCCTGCTGCTCCAGTCTTaGATGTGGCTGCCACACCCCAGCAAACAGATGGGT +
Preference number: 3 (lower is better)
Translates to: SGPSVASLLLQS*MWLPHPSKQMG
Trigger: ACCCATCTGTTTGCTGGGGTGTGGCAGCCACATCCAAGACTGGAGCAGCAGGCTGGCCACGCTCGGGCCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
3UTR CCA 72 bp AGGGTAGGGCAGCAGGAGGCTGTCAGTAGCTATCCTTaGGCCAAGGCCGGTTGCGCTGCCAGTTCCGGTCAC +
Preference number: 3 (lower is better)
Translates to: RVGQQEAVSSYP*AKAGCAASSGH
Trigger: GTGACCGGAACTGGCAGCGCAACCGGCCTTGGCCCAAGGATAGCTACTGACAGCCTCCTGCTGCCCTACCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551544.5
3UTR-3UTR CAA 90 bp GCCCTCCTTCCCCAAACCCCCATCCAGGTTGGCTCCCATCTGCCACTTGGCTTCCCTGCTGCTCCAGTCTaGGATGTGGCTGCCACACCC +
Preference number: 3 (lower is better)
Translates to: ALLPQTPIQVGSHLPLGFPAAPV*DVAATP
Trigger: GGGTGTGGCAGCCACATCCAAGACTGGAGCAGCAGG...GAAGCCAAGTGGCAGATGGGAGCCAACCTGGATGGGGGTTTGGGGAAGGAGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
3UTR-3UTR CAA 90 bp GGTGCAGAACACACAGCTAGTACCTGGAATGGGAGCCTAGTAGGGGTCACTGCCGCTGGGCAGGGGGTTTaGGGGGCTGAGCCTAGTGCC +
Preference number: 3 (lower is better)
Translates to: GAEHTASTWNGSLVGVTAAGQGV*GAEPSA
Trigger: GGCACTAGGCTCAGCCCCCAAAACCCCCTGCCCAGC...GGCAGTGACCCCTACTAGGCTCCCATTCCAGGTACTAGCTGTGTGTTCTGCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000301050.7
ENST00000536187.6
ENST00000540990.5
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
3UTR-3UTR CAA 90 bp ACATGCCCTCCTTCCCCAAACCCCCATCCAGGTTGGCTCCCATCTGCCACTTGGCCTGCTGCTCCAGTCTaGGATGTGGCTGCCACACCC +
Preference number: 3 (lower is better)
Translates to: TCPPSPNPHPGWLPSATWPAAPV*DVAATP
Trigger: GGGTGTGGCAGCCACATCCAAGACTGGAGCAGCAGG...CCAAGTGGCAGATGGGAGCCAACCTGGATGGGGGTTTGGGGAAGGAGGGCATGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
3UTR TCA 72 bp GCCACAGGTTTGTGCTTGGCCCTTTCGAGCTGCTGCTaGGCCTGGCTCTCTACTTCACGCCGGGCACTCTCC +
Preference number: 3 (lower is better)
Translates to: ATGLCLALSSCC*AWLSTSRRALS
Trigger: GGAGAGTGCCCGGCGTGAAGTAGAGAGCCAGGCTCAGCAGCAGCTCGAAAGGGCCAAGCACAAACCTGTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551544.5
3UTR TCA 72 bp TGCATAGTCCTCCTCCAGGTGGCGGGAGCTACGCTGTaGAGATCCTGTCCAGGCTTGGCGGGAGCTCTCGCT +
Preference number: 3 (lower is better)
Translates to: CIVLLQVAGATL*RSCPGLAGALA
Trigger: AGCGAGAGCTCCCGCCAAGCCTGGACAGGATCTTCACAGCGTAGCTCCCGCCACCTGGAGGAGGACTATGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551544.5
3UTR GCA 72 bp TTGGCGGTGAGGCTGGTACAGGTCCTGGTAGGCATCTaGATAGTCCTCCTCCAGGTGGCGGGAGCTACGCTG +
Preference number: 3 (lower is better)
Translates to: LAVRLVQVLVGI*IVLLQVAGATL
Trigger: CAGCGTAGCTCCCGCCACCTGGAGGAGGACTATGCAGATGCCTACCAGGACCTGTACCAGCCTCACCGCCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551544.5
3UTR GCA 72 bp TCTGAGTCCTGGGCTAGAAGCCGGTCTTGGGGGTCATaGCCGTTAGCACTAGGCAGCCCCGAGGTGTGTTGG +
Preference number: 3 (lower is better)
Translates to: SESWARSRSWGS*PLALGSPEVCW
Trigger: CCAACACACCTCGGGGCTGCCTAGTGCTAACGGGCATGACCCCCAAGACCGGCTTCTAGCCCAGGACTCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000551544.5
3UTR CCA 72 bp GCGGAGGGGAGCGTCGGTTGCCAATGTCACTCAGGCTaGAAGGGTTCCCAGATCTCCTGGCCTTCTGCTCCT +
Preference number: 3 (lower is better)
Translates to: AEGSVGCQCHSG*KGSQISWPSAP
Trigger: AGGAGCAGAAGGCCAGGAGATCTGGGAACCCTTCCAGCCTGAGTGACATTGGCAACCGACGCTCCCCTCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551544.5
3UTR CCA 72 bp TGGTTGTGCTCTGAGTCCTGGGCTAGAAGCCGGTCTTaGGGGTCATGCCCGTTAGCACTAGGCAGCCCCGAG +
Preference number: 3 (lower is better)
Translates to: WLCSESWARSRS*GSCPLALGSPE
Trigger: CTCGGGGCTGCCTAGTGCTAACGGGCATGACCCCCAAGACCGGCTTCTAGCCCAGGACTCAGAGCACAACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551544.5
3UTR GCA 72 bp GAGGCTGTCAGTAGCTATCCTTGGGCCAAGGCCGGTTaGGCTGCCAGTTCCGGTCACTGTGGTTGTGCTCTG +
Preference number: 3 (lower is better)
Translates to: EAVSSYPWAKAG*AASSGHCGCAL
Trigger: CAGAGCACAACCACAGTGACCGGAACTGGCAGCGCAACCGGCCTTGGCCCAAGGATAGCTACTGACAGCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551544.5
3UTR CCA 72 bp CCAAACCCCCATCCAGGTTGGCTCCCATCTGCCACTTaGCTTCACCATGCTCCTGGTCCCTGGTCCTGTCAC +
Preference number: 3 (lower is better)
Translates to: PNPHPGWLPSAT*LHHAPGPWSCH
Trigger: GTGACAGGACCAGGGACCAGGAGCATGGTGAAGCCAAGTGGCAGATGGGAGCCAACCTGGATGGGGGTTTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
3UTR CCA 72 bp GTGAAGATCCTGTCCAGGCTTGGCGGGAGCTCTCGCTaGCCTCATCAGAGGGCATCAAGCTGTCCCGCTCAA +
Preference number: 3 (lower is better)
Translates to: VKILSRLGGSSR*PHQRASSCPAQ
Trigger: TTGAGCGGGACAGCTTGATGCCCTCTGATGAGGCCAGCGAGAGCTCCCGCCAAGCCTGGACAGGATCTTCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551544.5
3UTR-3UTR CAA 90 bp TTCCCCAAACCCCCATCCAGGTTGGCTCCCATCTGCCACTTGGCTTCACCATGCGCTCCCATCTGCCACTaGGCTTCACCATGCTCCTGG +
Preference number: 3 (lower is better)
Translates to: FPKPPSRLAPICHLASPCAPICH*ASPCSW
Trigger: CCAGGAGCATGGTGAAGCCAAGTGGCAGATGGGAGC...GCATGGTGAAGCCAAGTGGCAGATGGGAGCCAACCTGGATGGGGGTTTGGGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
3UTR-3UTR CAA 90 bp CCCCAAACCCCCATCCAGGTTGGCTCCCATCTGCCACTTGGCTTCACCATGCTCAGCTGCTCCGCATTCTaGCCCCATCTTTCCAGGCAC +
Preference number: 3 (lower is better)
Translates to: PQTPIQVGSHLPLGFTMLSCSAF*PHLSRH
Trigger: GTGCCTGGAAAGATGGGGCAAGAATGCGGAGCAGCT...GAGCATGGTGAAGCCAAGTGGCAGATGGGAGCCAACCTGGATGGGGGTTTGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000551544.5
3UTR GCA 72 bp GGTCCTCTTGCCCGGATTGTTGAGCACAGATCGCTTTaGCAGGGAGAGGTCGGCTGTGACTCGGGTGATGGA +
Preference number: 3 (lower is better)
Translates to: GPLARIVEHRSL*QGEVGCDSGDG
Trigger: TCCATCACCCGAGTCACAGCCGACCTCTCCCTGGCAAAGCGATCTGTGCTCAACAATCCGGGCAAGAGGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000550483.5
ENST00000551544.5
3UTR GCA 72 bp TCTGCTTGGCTAGAGATGGCGGAGGGGAGCGTCGGTTaGCAATGTCACTCAGGCTGGAAGGGTTCCCAGATC +
Preference number: 3 (lower is better)
Translates to: SAWLEMAEGSVG*QCHSGWKGSQI
Trigger: GATCTGGGAACCCTTCCAGCCTGAGTGACATTGGCAACCGACGCTCCCCTCCGCCATCTCTAGCCAAGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551544.5
3UTR CCA 72 bp TGCCAGTTCCGGTCACTGTGGTTGTGCTCTGAGTCCTaGGCTAGAAGCCGGTCTTGGGGGTCATGCCCGTTA +
Preference number: 3 (lower is better)
Translates to: CQFRSLWLCSES*ARSRSWGSCPL
Trigger: TAACGGGCATGACCCCCAAGACCGGCTTCTAGCCCAGGACTCAGAGCACAACCACAGTGACCGGAACTGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000551544.5
3UTR-3UTR CAA 90 bp AGCCATAAGGCAAGAGTAGCCGGGGAGACAGGTCCTCTGTGCCCTGTCTCTCCCGCCTGCTCAGGGACCTaGTTTCTTCCTCATGCCATG +
Preference number: 3 (lower is better)
Translates to: SHKARVAGETGPLCPVSPACSGT*FLPHAM
Trigger: CATGGCATGAGGAAGAAACAAGGTCCCTGAGCAGGC...GGGAGAGACAGGGCACAGAGGACCTGTCTCCCCGGCTACTCTTGCCTTATGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
3UTR-3UTR CAA 90 bp CCCCAAACCCCCATCCAGGTTGGCTCCCATCTGCCACTTGGCTTCACCATGCTCGCAAATGCCACAGGTTaGTGCTTGGCCCTTTCGAGC +
Preference number: 3 (lower is better)
Translates to: PQTPIQVGSHLPLGFTMLANATG*CLALSS
Trigger: GCTCGAAAGGGCCAAGCACAAACCTGTGGCATTTGC...GAGCATGGTGAAGCCAAGTGGCAGATGGGAGCCAACCTGGATGGGGGTTTGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000551544.5
3UTR-3UTR CAA 90 bp CTGCTCCAGTCTTGGATGTGGCTGCCACACCCCAGCAAACAGATGGGTGTGCCAGCCTGCTCAGGGACCTaGTTTCTTCCTCATGCCATG +
Preference number: 3 (lower is better)
Translates to: LLQSWMWLPHPSKQMGVPACSGT*FLPHAM
Trigger: CATGGCATGAGGAAGAAACAAGGTCCCTGAGCAGGC...TGGCACACCCATCTGTTTGCTGGGGTGTGGCAGCCACATCCAAGACTGGAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
3UTR-3UTR CAA 90 bp AGGCCCTGGATGCCAAAGCAGTCCCTTGACTGTCAGGACTTGTGCCTGCTCAGGCTTGACTGTCAGGACTaGTGCCTGCTCAGGGACCTT +
Preference number: 3 (lower is better)
Translates to: RPWMPKQSLDCQDLCLLRLDCQD*CLLRDL
Trigger: AAGGTCCCTGAGCAGGCACAAGTCCTGACAGTCAAG...CCTGAGCAGGCACAAGTCCTGACAGTCAAGGGACTGCTTTGGCATCCAGGGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
3UTR-3UTR CAA 90 bp AGGCCCTGGATGCCAAAGCAGTCCCTTGACTGTCAGGACTTGTGCCTGCTCAGGTGCCAAAGCAGTCCCTaGACTGTCAGGACTTGTGCC +
Preference number: 3 (lower is better)
Translates to: RPWMPKQSLDCQDLCLLRCQSSP*TVRTCA
Trigger: GGCACAAGTCCTGACAGTCAAGGGACTGCTTTGGCA...CCTGAGCAGGCACAAGTCCTGACAGTCAAGGGACTGCTTTGGCATCCAGGGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
3UTR-3UTR CAA 90 bp GACTGGGCACTCCTCATCCAGTACGCCACAGTAGCTGACATTGGTCCTCACCGCCTCTTGCCCGGATTGTaGAGCACAGATCGCTTTGCC +
Preference number: 3 (lower is better)
Translates to: DWALLIQYATVADIGPHRLLPGL*STDRFA
Trigger: GGCAAAGCGATCTGTGCTCAACAATCCGGGCAAGAG...GCGGTGAGGACCAATGTCAGCTACTGTGGCGTACTGGATGAGGAGTGCCCAGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551544.5
3UTR-3UTR CAA 90 bp TTAATGGGGCATCCCTTCCCTGAGTCTGGTGGGAAGGACCCTGCTAAGGGGATCTGCCAAAGCAGTCCCTaGACTGTCAGGACTTGTGCC +
Preference number: 3 (lower is better)
Translates to: LMGHPFPESGGKDPAKGICQSSP*TVRTCA
Trigger: GGCACAAGTCCTGACAGTCAAGGGACTGCTTTGGCA...GATCCCCTTAGCAGGGTCCTTCCCACCAGACTCAGGGAAGGGATGCCCCATTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
3UTR-3UTR CAA 90 bp AGGGTTCCCAGATCTCCTGGCCTTCTGCTCCTGTTTGAGCCGGATGCTCTCCAGGTCCTCTTGCCCGGATaGTTGAGCACAGATCGCTTT +
Preference number: 3 (lower is better)
Translates to: RVPRSPGLLLLFEPDALQVLLPG*LSTDRF
Trigger: AAAGCGATCTGTGCTCAACAATCCGGGCAAGAGGAC...CTGGAGAGCATCCGGCTCAAACAGGAGCAGAAGGCCAGGAGATCTGGGAACCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551544.5
3UTR-3UTR CAA 90 bp GGCAGCTATGAGTCAGGGAACAAAGTCTGGAGCCCGGTTCTCCAAAGATGTATGGCTCCCATCTGCCACTaGGCTTCACCATGCTCCTGG +
Preference number: 3 (lower is better)
Translates to: GSYESGNKVWSPVLQRCMAPICH*ASPCSW
Trigger: CCAGGAGCATGGTGAAGCCAAGTGGCAGATGGGAGC...CATACATCTTTGGAGAACCGGGCTCCAGACTTTGTTCCCTGACTCATAGCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
3UTR-3UTR CAA 90 bp GACTGGGCACTCCTCATCCAGTACGCCACAGTAGCTGACATTGGTCCTCACCGCTCAATGATGGTCCTCTaGCCCGGATTGTTGAGCACA +
Preference number: 3 (lower is better)
Translates to: DWALLIQYATVADIGPHRSMMVL*PGLLST
Trigger: TGTGCTCAACAATCCGGGCAAGAGGACCATCATTGA...GCGGTGAGGACCAATGTCAGCTACTGTGGCGTACTGGATGAGGAGTGCCCAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551544.5
3UTR-3UTR CAA 90 bp CTGCTCCAGTCTTGGATGTGGCTGCCACACCCCAGCAAACAGATGGGTGTGCCAGCTGAACCAGGACATTaGAGGGAAAGTTGTCAGCTC +
Preference number: 3 (lower is better)
Translates to: LLQSWMWLPHPSKQMGVPAEPGH*RESCQL
Trigger: GAGCTGACAACTTTCCCTCAAATGTCCTGGTTCAGC...TGGCACACCCATCTGTTTGCTGGGGTGTGGCAGCCACATCCAAGACTGGAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551544.5
3UTR-3UTR CAA 90 bp GGCAGCTATGAGTCAGGGAACAAAGTCTGGAGCCCGGTTCTCCAAAGATGTATGGCCTTCTGCTCCTGTTaGAGCCGGATGCTCTCCAGG +
Preference number: 3 (lower is better)
Translates to: GSYESGNKVWSPVLQRCMAFCSC*SRMLSR
Trigger: CCTGGAGAGCATCCGGCTCAAACAGGAGCAGAAGGC...CATACATCTTTGGAGAACCGGGCTCCAGACTTTGTTCCCTGACTCATAGCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551544.5
3UTR TCA 72 bp TGGTCCTGTCACATGTTAAGAAGCTTCCTGGCAGGGTaGGGAGAGCCCTTCCCTCCAAGAGCTTCAGCTGTG +
Preference number: 3 (lower is better)
Translates to: WSCHMLRSFLAG*GEPFPPRASAV
Trigger: CACAGCTGAAGCTCTTGGAGGGAAGGGCTCTCCTCACCCTGCCAGGAAGCTTCTTAACATGTGACAGGACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
3UTR GCA 72 bp CTAATGTATGGCAGTGAGGTGACTGGAGGCCCTGGATaGCAAAGCAGTCCCTTGACTGTCAGGACTTGTGCC +
Preference number: 3 (lower is better)
Translates to: LMYGSEVTGGPG*QSSPLTVRTCA
Trigger: GGCACAAGTCCTGACAGTCAAGGGACTGCTTTGGCATCCAGGGCCTCCAGTCACCTCACTGCCATACATTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
3UTR GCA 72 bp TCCAGGTTGGCTCCCATCTGCCACTTGGCTTCACCATaGTCCTGGTCCCTGGTCCTGTCACATGTTAAGAAG +
Preference number: 3 (lower is better)
Translates to: SRLAPICHLASP*SWSLVLSHVKK
Trigger: CTTCTTAACATGTGACAGGACCAGGGACCAGGAGCATGGTGAAGCCAAGTGGCAGATGGGAGCCAACCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
3UTR GCA 72 bp GATTTGGCCAGCTCAAATATGCGCTCGATCTCACTCTaGACTTCCGCTATGGAGGGAGGCAGCAGCAGTGCT +
Preference number: 3 (lower is better)
Translates to: DLASSNMRSISL*TSAMEGGSSSA
Trigger: AGCACTGCTGCTGCCTCCCTCCATAGCGGAAGTGCAGAGTGAGATCGAGCGCATATTTGAGCTGGCCAAATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550483.5
3UTR GCA 72 bp TCCGCATTCTTGCCCCATCTTTCCAGGCACTCTCCCTaGTGTCTGAGCTCCGGGAATCACTGCTTAATGAGC +
Preference number: 3 (lower is better)
Translates to: SAFLPHLSRHSP*CLSSGNHCLMS
Trigger: GCTCATTAAGCAGTGATTCCCGGAGCTCAGACAGCAGGGAGAGTGCCTGGAAAGATGGGGCAAGAATGCGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551544.5
3UTR CCA 72 bp ATCTTTGGCCTCAAAGTTGACTCCAGAGCCCTGGACTaGGCACTCCTCATCCAGTACGCCACAGTAGCTGAC +
Preference number: 3 (lower is better)
Translates to: IFGLKVDSRALD*ALLIQYATVAD
Trigger: GTCAGCTACTGTGGCGTACTGGATGAGGAGTGCCCAGTCCAGGGCTCTGGAGTCAACTTTGAGGCCAAAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551544.5
3UTR-3UTR CAA 90 bp CAAACCCCCATCCAGGTTGGCTCCCATCTGCCACTTGGCTTCACCATGCTCCTGTTTGGTGAGGACACTTaGACAAAGACGATGATGGGG +
Preference number: 3 (lower is better)
Translates to: QTPIQVGSHLPLGFTMLLFGEDT*TKTMMG
Trigger: CCCCATCATCGTCTTTGTCAAAGTGTCCTCACCAAA...CAGGAGCATGGTGAAGCCAAGTGGCAGATGGGAGCCAACCTGGATGGGGGTTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000551544.5
3UTR TCA 72 bp ATATGCCATCATCTGTACGGTCAGGTGCTTCATCTGTaGCTTCCCCCGGGAGCGAATGAGACGCTGGAGTAC +
Preference number: 3 (lower is better)
Translates to: ICHHLYGQVLHL*LPPGANETLEY
Trigger: GTACTCCAGCGTCTCATTCGCTCCCGGGGGAAGTCACAGATGAAGCACCTGACCGTACAGATGATGGCATAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000551544.5
3UTR CCA 72 bp TTGGCTCCCATCTGCCACTTGGCTTCACCATGCTCCTaGTCCCTGGTCCTGTCACATGTTAAGAAGCTTCCT +
Preference number: 3 (lower is better)
Translates to: LAPICHLASPCS*SLVLSHVKKLP
Trigger: AGGAAGCTTCTTAACATGTGACAGGACCAGGGACCAGGAGCATGGTGAAGCCAAGTGGCAGATGGGAGCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
3UTR-3UTR CAA 90 bp GGCAGCTATGAGTCAGGGAACAAAGTCTGGAGCCCGGTTCTCCAAAGATGTATGCTTGACTGTCAGGACTaGTGCCTGCTCAGGGACCTT +
Preference number: 3 (lower is better)
Translates to: GSYESGNKVWSPVLQRCMLDCQD*CLLRDL
Trigger: AAGGTCCCTGAGCAGGCACAAGTCCTGACAGTCAAG...CATACATCTTTGGAGAACCGGGCTCCAGACTTTGTTCCCTGACTCATAGCTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
3UTR-3UTR CAA 90 bp TTGTTGAGCACAGATCGCTTTGCCAGGGAGAGGTCGGCTGTGACTCGGGTGATGCCATCAAATCTGTGTTaGAGGAAGTCGAAGAGAGCC +
Preference number: 3 (lower is better)
Translates to: LLSTDRFARERSAVTRVMPSNLC*RKSKRA
Trigger: GGCTCTCTTCGACTTCCTCAAACACAGATTTGATGG...CATCACCCGAGTCACAGCCGACCTCTCCCTGGCAAAGCGATCTGTGCTCAACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000550391.5
ENST00000550483.5
ENST00000551544.5
3UTR-3UTR CAA 90 bp ATCTGTACGGTCAGGTGCTTCATCTGTGACTTCCCCCGGGAGCGAATGAGACGCCCATCAAATCTGTGTTaGAGGAAGTCGAAGAGAGCC +
Preference number: 3 (lower is better)
Translates to: ICTVRCFICDFPRERMRRPSNLC*RKSKRA
Trigger: GGCTCTCTTCGACTTCCTCAAACACAGATTTGATGG...GCGTCTCATTCGCTCCCGGGGGAAGTCACAGATGAAGCACCTGACCGTACAGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000551544.5
3UTR-3UTR CAA 90 bp TGGACAGGAAGGAATTGGAGGAAAAGGGCATTCATCGAAGCCAATGCTGGAGCGCTCTTGCCCGGATTGTaGAGCACAGATCGCTTTGCC +
Preference number: 3 (lower is better)
Translates to: WTGRNWRKRAFIEANAGALLPGL*STDRFA
Trigger: GGCAAAGCGATCTGTGCTCAACAATCCGGGCAAGAG...CGCTCCAGCATTGGCTTCGATGAATGCCCTTTTCCTCCAATTCCTTCCTGTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550483.5
3UTR TCA 72 bp AGGACATTTGAGGGAAAGTTGTCAGCTCCAAGGGGCTaGGAAGCTGCTCCGCATTCTTGCCCCATCTTTCCA +
Preference number: 3 (lower is better)
Translates to: RTFEGKLSAPRG*EAAPHSCPIFP
Trigger: TGGAAAGATGGGGCAAGAATGCGGAGCAGCTTCTCAGCCCCTTGGAGCTGACAACTTTCCCTCAAATGTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551544.5
3UTR CCA 72 bp TGGTGTCAGCGTCCAACACTACTAGCTGCAGGGATTTaGCCAGCTCAAATATGCGCTCGATCTCACTCTGCA +
Preference number: 3 (lower is better)
Translates to: WCQRPTLLAAGI*PAQICARSHSA
Trigger: TGCAGAGTGAGATCGAGCGCATATTTGAGCTGGCCAAATCCCTGCAGCTAGTAGTGTTGGACGCTGACACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000550483.5
ENST00000551544.5
3UTR-3UTR CAA 90 bp AGGAATTGGAGGAAAAGGGCATTCATCGAAGCCAATGCTGGAGCGGGCAGAGGACCATCAAATCTGTGTTaGAGGAAGTCGAAGAGAGCC +
Preference number: 3 (lower is better)
Translates to: RNWRKRAFIEANAGAGRGPSNLC*RKSKRA
Trigger: GGCTCTCTTCGACTTCCTCAAACACAGATTTGATGG...TCCTCTGCCCGCTCCAGCATTGGCTTCGATGAATGCCCTTTTCCTCCAATTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550483.5
3UTR GCA 72 bp ACCAGCTTATCATATGCCATCATCTGTACGGTCAGGTaGTTCATCTGTGACTTCCCCCGGGAGCGAATGAGA +
Preference number: 3 (lower is better)
Translates to: TSLSYAIICTVR*FICDFPRERMR
Trigger: TCTCATTCGCTCCCGGGGGAAGTCACAGATGAAGCACCTGACCGTACAGATGATGGCATATGATAAGCTGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000551544.5
3UTR CCA 72 bp CTAACAAGCGGCAGCTATGAGTCAGGGAACAAAGTCTaGAGCCCGGTTCTCCAAAGATGTATGAGGGACAAG +
Preference number: 3 (lower is better)
Translates to: LTSGSYESGNKV*SPVLQRCMRDK
Trigger: CTTGTCCCTCATACATCTTTGGAGAACCGGGCTCCAGACTTTGTTCCCTGACTCATAGCTGCCGCTTGTTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
3UTR TCA 72 bp GGAACAAAGTCTGGAGCCCGGTTCTCCAAAGATGTATaGGGGACAAGAACAGAAATGACAGGATGCAGGGCA +
Preference number: 3 (lower is better)
Translates to: GTKSGARFSKDV*GTRTEMTGCRA
Trigger: TGCCCTGCATCCTGTCATTTCTGTTCTTGTCCCTCATACATCTTTGGAGAACCGGGCTCCAGACTTTGTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
3UTR TCA 72 bp TGCTGTCTGAGCTCCGGGAATCACTGCTTAATGAGCTaGTTTGTCTCAGTGGGTCAGGAGATAAAAGCAAAG +
Preference number: 3 (lower is better)
Translates to: CCLSSGNHCLMS*FVSVGQEIKAK
Trigger: CTTTGCTTTTATCTCCTGACCCACTGAGACAAATCAGCTCATTAAGCAGTGATTCCCGGAGCTCAGACAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551544.5
3UTR TCA 72 bp GGTTCTCCAAAGATGTATGAGGGACAAGAACAGAAATaGCAGGATGCAGGGCAAAAGAATGAGAAAGGCAAG +
Preference number: 3 (lower is better)
Translates to: GSPKMYEGQEQK*QDAGQKNEKGK
Trigger: CTTGCCTTTCTCATTCTTTTGCCCTGCATCCTGTCATTTCTGTTCTTGTCCCTCATACATCTTTGGAGAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR CCA 90 bp TACCTGGAATGGGAGCCTAGTAGGGGTCACTGCCCAGGAGGTGAGGGGGTCCCCAGCCGGGCAGCGTCCTaGCCGGGACTGGGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: YLEWEPSRGHCPGGEGVPSRAAS*PGLGSR
Trigger: CCTGCTGCCCAGTCCCGGCCAGGACGCTGCCCGGCT...GGGGACCCCCTCACCTCCTGGGCAGTGACCCCTACTAGGCTCCCATTCCAGGTA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000540990.5
CDS-3UTR GCA 90 bp TACCTGGAATGGGAGCCTAGTAGGGGTCACTGCCCAGGAGGTGAGGGGGTCCCCGCAAAACCCGGCCGCTaGTCTGCACGCTGCTCCCGC +
Preference number: 4 (lower is better)
Translates to: YLEWEPSRGHCPGGEGVPAKPGR*SARCSR
Trigger: GCGGGAGCAGCGTGCAGAGCAGCGGCCGGGTTTTGC...GGGGACCCCCTCACCTCCTGGGCAGTGACCCCTACTAGGCTCCCATTCCAGGTA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000536187.6
CDS-3UTR CCA 90 bp TACCTGGAATGGGAGCCTAGTAGGGGTCACTGCCCAGGAGGTGAGGGGGTCCCCGGCCCTCAGCTCCTCTaGCCTCACCTCCAGGCCCTC +
Preference number: 4 (lower is better)
Translates to: YLEWEPSRGHCPGGEGVPGPQLL*PHLQAL
Trigger: GAGGGCCTGGAGGTGAGGCCAGAGGAGCTGAGGGCC...GGGGACCCCCTCACCTCCTGGGCAGTGACCCCTACTAGGCTCCCATTCCAGGTA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000551544.5
CDS-3UTR TCA 90 bp TACCTGGAATGGGAGCCTAGTAGGGGTCACTGCCCAGGAGGTGAGGGGGTCCCCGGGGCATCCCTTCCCTaGGTCTGGTGGGAAGGACCC +
Preference number: 4 (lower is better)
Translates to: YLEWEPSRGHCPGGEGVPGASLP*VWWEGP
Trigger: GGGTCCTTCCCACCAGACTCAGGGAAGGGATGCCCC...GGGGACCCCCTCACCTCCTGGGCAGTGACCCCTACTAGGCTCCCATTCCAGGTA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR TCA 90 bp AGCCGGTCTTGGGGGTCATGCCCGTTAGCACTAGGCAGCCCCGAGGTGTGTTGGGGGGCATCCCTTCCCTaGGTCTGGTGGGAAGGACCC +
Preference number: 4 (lower is better)
Translates to: SRSWGSCPLALGSPEVCWGASLP*VWWEGP
Trigger: GGGTCCTTCCCACCAGACTCAGGGAAGGGATGCCCC...CCAACACACCTCGGGGCTGCCTAGTGCTAACGGGCATGACCCCCAAGACCGGCT
66% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000551544.5
CDS-3UTR GCA 90 bp CTGAGTCTGGTGGGAAGGACCCTGCTAAGGGGATCCTGGCCTGAGGGCACTGCCAGCTGCGCCTGTGCCTaGCAGGGTAGGGCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: LSLVGRTLLRGSWPEGTASCACA*QGRAAG
Trigger: TCCTGCTGCCCTACCCTGGCAGGCACAGGCGCAGCT...GGCAGTGCCCTCAGGCCAGGATCCCCTTAGCAGGGTCCTTCCCACCAGACTCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR GCA 90 bp CATATGGGGGAACATGTTCCGCCTAGAGATGGCGGAGGGGAGCGTCGGTTGCCAACCCGGCCGCTGCTCTaGACGCTGCTCCCGCCTGCA +
Preference number: 4 (lower is better)
Translates to: HMGEHVPPRDGGGERRLPTRPLL*TLLPPA
Trigger: TGCAGGCGGGAGCAGCGTGCAGAGCAGCGGCCGGGT...TGGCAACCGACGCTCCCCTCCGCCATCTCTAGGCGGAACATGTTCCCCCATATG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000548874.5
CDS-3UTR CCA 90 bp CCAGGAGGTGAGGGGGTCCCCTGTTTCTCCCAGAACCTTGGGACCACAGGCAGCATGCTCTCCAGGCGCTaGGGGCTGGGGATGAAGGCG +
Preference number: 4 (lower is better)
Translates to: PGGEGVPCFSQNLGTTGSMLSRR*GLGMKA
Trigger: CGCCTTCATCCCCAGCCCCCAGCGCCTGGAGAGCAT...GCTGCCTGTGGTCCCAAGGTTCTGGGAGAAACAGGGGACCCCCTCACCTCCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000301050.7
ENST00000536187.6
ENST00000540990.5
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR CCA 90 bp CCAGGAGGTGAGGGGGTCCCCTGTTTCTCCCAGAACCTTGGGACCACAGGCAGCGGGCTGGGTGGTGCGTaGCCCGCCAGTAAACCTCCA +
Preference number: 4 (lower is better)
Translates to: PGGEGVPCFSQNLGTTGSGLGGA*PASKPP
Trigger: TGGAGGTTTACTGGCGGGCCACGCACCACCCAGCCC...GCTGCCTGTGGTCCCAAGGTTCTGGGAGAAACAGGGGACCCCCTCACCTCCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000301050.7
ENST00000536187.6
ENST00000540990.5
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR CCA 90 bp TACCTGGAATGGGAGCCTAGTAGGGGTCACTGCCCAGGAGGTGAGGGGGTCCCCGGGCTGGGTGGTGCGTaGCCCGCCAGTAAACCTCCA +
Preference number: 4 (lower is better)
Translates to: YLEWEPSRGHCPGGEGVPGLGGA*PASKPP
Trigger: TGGAGGTTTACTGGCGGGCCACGCACCACCCAGCCC...GGGGACCCCCTCACCTCCTGGGCAGTGACCCCTACTAGGCTCCCATTCCAGGTA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000301050.7
ENST00000536187.6
ENST00000540990.5
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR CCA 90 bp CCAGGAGGTGAGGGGGTCCCCTGTTTCTCCCAGAACCTTGGGACCACAGGCAGCGTCCGGGGATGGCACTaGGAGGACCCAGAAGTCCGG +
Preference number: 4 (lower is better)
Translates to: PGGEGVPCFSQNLGTTGSVRGWH*EDPEVR
Trigger: CCGGACTTCTGGGTCCTCCCAGTGCCATCCCCGGAC...GCTGCCTGTGGTCCCAAGGTTCTGGGAGAAACAGGGGACCCCCTCACCTCCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000301050.7
ENST00000536187.6
ENST00000540990.5
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR CCA 90 bp TACCTGGAATGGGAGCCTAGTAGGGGTCACTGCCCAGGAGGTGAGGGGGTCCCCGTCCGGGGATGGCACTaGGAGGACCCAGAAGTCCGG +
Preference number: 4 (lower is better)
Translates to: YLEWEPSRGHCPGGEGVPVRGWH*EDPEVR
Trigger: CCGGACTTCTGGGTCCTCCCAGTGCCATCCCCGGAC...GGGGACCCCCTCACCTCCTGGGCAGTGACCCCTACTAGGCTCCCATTCCAGGTA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000301050.7
ENST00000536187.6
ENST00000540990.5
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR CCA 90 bp TACCTGGAATGGGAGCCTAGTAGGGGTCACTGCCCAGGAGGTGAGGGGGTCCCCGATCCTGTCCAGGCTTaGCGGGAGCTCTCGCTGGCC +
Preference number: 4 (lower is better)
Translates to: YLEWEPSRGHCPGGEGVPDPVQA*RELSLA
Trigger: GGCCAGCGAGAGCTCCCGCCAAGCCTGGACAGGATC...GGGGACCCCCTCACCTCCTGGGCAGTGACCCCTACTAGGCTCCCATTCCAGGTA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000301050.7
ENST00000536187.6
ENST00000540990.5
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR CCA 90 bp CCAGGAGGTGAGGGGGTCCCCTGTTTCTCCCAGAACCTTGGGACCACAGGCAGCGATCCTGTCCAGGCTTaGCGGGAGCTCTCGCTGGCC +
Preference number: 4 (lower is better)
Translates to: PGGEGVPCFSQNLGTTGSDPVQA*RELSLA
Trigger: GGCCAGCGAGAGCTCCCGCCAAGCCTGGACAGGATC...GCTGCCTGTGGTCCCAAGGTTCTGGGAGAAACAGGGGACCCCCTCACCTCCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000301050.7
ENST00000536187.6
ENST00000540990.5
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR CCA 90 bp CCCGTTAGCACTAGGCAGCCCCGAGGTGTGTTGGCGGTGAGGCTGGTACAGGTCGATCCTGTCCAGGCTTaGCGGGAGCTCTCGCTGGCC +
Preference number: 4 (lower is better)
Translates to: PVSTRQPRGVLAVRLVQVDPVQA*RELSLA
Trigger: GGCCAGCGAGAGCTCCCGCCAAGCCTGGACAGGATC...GACCTGTACCAGCCTCACCGCCAACACACCTCGGGGCTGCCTAGTGCTAACGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551544.5
CDS-3UTR CCA 90 bp CCAGGAGGTGAGGGGGTCCCCTGTTTCTCCCAGAACCTTGGGACCACAGGCAGCGCTGTGAGCTCTCTCTaGCCCGAGCGTGGCCAGCCT +
Preference number: 4 (lower is better)
Translates to: PGGEGVPCFSQNLGTTGSAVSSL*PERGQP
Trigger: AGGCTGGCCACGCTCGGGCCAGAGAGAGCTCACAGC...GCTGCCTGTGGTCCCAAGGTTCTGGGAGAAACAGGGGACCCCCTCACCTCCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR CCA 90 bp GTTGAGCACAGATCGCTTTGCCAGGGAGAGGTCGGCTGTGACTCGGGTGATGGAAGCCGGGCAGCGTCCTaGCCGGGACTGGGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: VEHRSLCQGEVGCDSGDGSRAAS*PGLGSR
Trigger: CCTGCTGCCCAGTCCCGGCCAGGACGCTGCCCGGCT...TCCATCACCCGAGTCACAGCCGACCTCTCCCTGGCAAAGCGATCTGTGCTCAAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550391.5
CDS-3UTR CCA 90 bp TACCTGGAATGGGAGCCTAGTAGGGGTCACTGCCCAGGAGGTGAGGGGGTCCCCCTGAACCCTCCATCCTaGTCTCGAGGGGCGCCCCAG +
Preference number: 4 (lower is better)
Translates to: YLEWEPSRGHCPGGEGVPLNPPS*SRGAPQ
Trigger: CTGGGGCGCCCCTCGAGACCAGGATGGAGGGTTCAG...GGGGACCCCCTCACCTCCTGGGCAGTGACCCCTACTAGGCTCCCATTCCAGGTA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 1 transcripts:
ENST00000540990.5
CDS-3UTR TCA 90 bp GCAGAACACACAGCTAGTACCTGGAATGGGAGCCTAGTAGGGGTCACTGCCCAGCACCCCGAGCGCGGCTaGGGAATCTGGCGCCGGCTC +
Preference number: 4 (lower is better)
Translates to: AEHTASTWNGSLVGVTAQHPERG*GIWRRL
Trigger: GAGCCGGCGCCAGATTCCTCAGCCGCGCTCGGGGTG...CTGGGCAGTGACCCCTACTAGGCTCCCATTCCAGGTACTAGCTGTGTGTTCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301050.7
ENST00000547392.5
CDS-3UTR TCA 90 bp CCAGGAGGTGAGGGGGTCCCCTGTTTCTCCCAGAACCTTGGGACCACAGGCAGCCTCCAGGGAGACGTCTaGGTCCAGAGATGGGCGGCT +
Preference number: 4 (lower is better)
Translates to: PGGEGVPCFSQNLGTTGSLQGDV*VQRWAA
Trigger: AGCCGCCCATCTCTGGACTCAGACGTCTCCCTGGAG...GCTGCCTGTGGTCCCAAGGTTCTGGGAGAAACAGGGGACCCCCTCACCTCCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000301050.7
ENST00000536187.6
ENST00000540990.5
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR TCA 90 bp CCAGGAGGTGAGGGGGTCCCCTGTTTCTCCCAGAACCTTGGGACCACAGGCAGCGAGGTGTGTTGGCGGTaGGGCTGGTACAGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: PGGEGVPCFSQNLGTTGSEVCWR*GWYRSW
Trigger: CCAGGACCTGTACCAGCCTCACCGCCAACACACCTC...GCTGCCTGTGGTCCCAAGGTTCTGGGAGAAACAGGGGACCCCCTCACCTCCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000301050.7
ENST00000536187.6
ENST00000540990.5
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR TCA 90 bp CCAGGAGGTGAGGGGGTCCCCTGTTTCTCCCAGAACCTTGGGACCACAGGCAGCAGCTTCCTGGCAGGGTaGGGAGAGCCCTTCCCTCCA +
Preference number: 4 (lower is better)
Translates to: PGGEGVPCFSQNLGTTGSSFLAG*GEPFPP
Trigger: TGGAGGGAAGGGCTCTCCTCACCCTGCCAGGAAGCT...GCTGCCTGTGGTCCCAAGGTTCTGGGAGAAACAGGGGACCCCCTCACCTCCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR GCA 90 bp TACCTGGAATGGGAGCCTAGTAGGGGTCACTGCCCAGGAGGTGAGGGGGTCCCCCAAGGCCGGTTGCGCTaGCAGTTCCGGTCACTGTGG +
Preference number: 4 (lower is better)
Translates to: YLEWEPSRGHCPGGEGVPQGRLR*QFRSLW
Trigger: CCACAGTGACCGGAACTGGCAGCGCAACCGGCCTTG...GGGGACCCCCTCACCTCCTGGGCAGTGACCCCTACTAGGCTCCCATTCCAGGTA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000301050.7
ENST00000536187.6
ENST00000540990.5
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR GCA 90 bp TACCTGGAATGGGAGCCTAGTAGGGGTCACTGCCCAGGAGGTGAGGGGGTCCCCCCTAGTAGGGGTCACTaGCCAGGAGGTGAGGGGGTC +
Preference number: 4 (lower is better)
Translates to: YLEWEPSRGHCPGGEGVPPSRGH*PGGEGV
Trigger: GACCCCCTCACCTCCTGGGCAGTGACCCCTACTAGG...GGGGACCCCCTCACCTCCTGGGCAGTGACCCCTACTAGGCTCCCATTCCAGGTA
64% GC, longest homopolymer 6 nt, total homopolymer stretches 24 nt.
Matches the following 6 transcripts:
ENST00000301050.7
ENST00000536187.6
ENST00000540990.5
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR GCA 90 bp CATATGGGGGAACATGTTCCGCCTAGAGATGGCGGAGGGGAGCGTCGGTTGCCAGCAAAACCCGGCCGCTaGTCTGCACGCTGCTCCCGC +
Preference number: 4 (lower is better)
Translates to: HMGEHVPPRDGGGERRLPAKPGR*SARCSR
Trigger: GCGGGAGCAGCGTGCAGAGCAGCGGCCGGGTTTTGC...TGGCAACCGACGCTCCCCTCCGCCATCTCTAGGCGGAACATGTTCCCCCATATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000548874.5
CDS-3UTR CCA 90 bp CTGAGTCTGGTGGGAAGGACCCTGCTAAGGGGATCCTGGCCTGAGGGCACTGCCGTGCTAGGTGGAAGGTaGGTCCCCGAGCACCTACGG +
Preference number: 4 (lower is better)
Translates to: LSLVGRTLLRGSWPEGTAVLGGR*VPEHLR
Trigger: CCGTAGGTGCTCGGGGACCCACCTTCCACCTAGCAC...GGCAGTGCCCTCAGGCCAGGATCCCCTTAGCAGGGTCCTTCCCACCAGACTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301050.7
ENST00000547392.5
CDS-3UTR CCA 90 bp CCAGGAGGTGAGGGGGTCCCCTGTTTCTCCCAGAACCTTGGGACCACAGGCAGCGCACTTCCGCAATGCTaGAGCGGGCAGAGGAGCGCT +
Preference number: 4 (lower is better)
Translates to: PGGEGVPCFSQNLGTTGSALPQC*SGQRSA
Trigger: AGCGCTCCTCTGCCCGCTCCAGCATTGCGGAAGTGC...GCTGCCTGTGGTCCCAAGGTTCTGGGAGAAACAGGGGACCCCCTCACCTCCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000301050.7
ENST00000536187.6
ENST00000540990.5
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR CCA 90 bp CTGAGTCTGGTGGGAAGGACCCTGCTAAGGGGATCCTGGCCTGAGGGCACTGCCGGCGGGAGCTCTCGCTaGCCTCATCAGAGGGCATCA +
Preference number: 4 (lower is better)
Translates to: LSLVGRTLLRGSWPEGTAGGSSR*PHQRAS
Trigger: TGATGCCCTCTGATGAGGCCAGCGAGAGCTCCCGCC...GGCAGTGCCCTCAGGCCAGGATCCCCTTAGCAGGGTCCTTCCCACCAGACTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR TCA 90 bp TACCTGGAATGGGAGCCTAGTAGGGGTCACTGCCCAGGAGGTGAGGGGGTCCCCCCTTCTGCTCCTGTTTaGGCCGGATGCTCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: YLEWEPSRGHCPGGEGVPPSAPV*AGCSPG
Trigger: GCCTGGAGAGCATCCGGCTCAAACAGGAGCAGAAGG...GGGGACCCCCTCACCTCCTGGGCAGTGACCCCTACTAGGCTCCCATTCCAGGTA
63% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000301050.7
ENST00000536187.6
ENST00000540990.5
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR TCA 90 bp CTGAGTCTGGTGGGAAGGACCCTGCTAAGGGGATCCTGGCCTGAGGGCACTGCCCCTTCTGCTCCTGTTTaGGCCGGATGCTCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: LSLVGRTLLRGSWPEGTAPSAPV*AGCSPG
Trigger: GCCTGGAGAGCATCCGGCTCAAACAGGAGCAGAAGG...GGCAGTGCCCTCAGGCCAGGATCCCCTTAGCAGGGTCCTTCCCACCAGACTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR TCA 90 bp CCAGGAGGTGAGGGGGTCCCCTGTTTCTCCCAGAACCTTGGGACCACAGGCAGCAGCAGCTGCTGGTTCTaGAGTCCGGGGATGGCACTG +
Preference number: 4 (lower is better)
Translates to: PGGEGVPCFSQNLGTTGSSSCWF*SPGMAL
Trigger: CAGTGCCATCCCCGGACTTCAGAACCAGCAGCTGCT...GCTGCCTGTGGTCCCAAGGTTCTGGGAGAAACAGGGGACCCCCTCACCTCCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000301050.7
ENST00000536187.6
ENST00000540990.5
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR TCA 90 bp TACCTGGAATGGGAGCCTAGTAGGGGTCACTGCCCAGGAGGTGAGGGGGTCCCCGCGGGAGCTACGCTGTaGAGATCCTGTCCAGGCTTG +
Preference number: 4 (lower is better)
Translates to: YLEWEPSRGHCPGGEGVPAGATL*RSCPGL
Trigger: CAAGCCTGGACAGGATCTTCACAGCGTAGCTCCCGC...GGGGACCCCCTCACCTCCTGGGCAGTGACCCCTACTAGGCTCCCATTCCAGGTA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000301050.7
ENST00000536187.6
ENST00000540990.5
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR TCA 90 bp TACCTGGAATGGGAGCCTAGTAGGGGTCACTGCCCAGGAGGTGAGGGGGTCCCCAGCCTAGTGCCAGCCTaGTGCCAGTCTAACGCCACC +
Preference number: 4 (lower is better)
Translates to: YLEWEPSRGHCPGGEGVPSLVPA*CQSNAT
Trigger: GGTGGCGTTAGACTGGCATCAGGCTGGCACTAGGCT...GGGGACCCCCTCACCTCCTGGGCAGTGACCCCTACTAGGCTCCCATTCCAGGTA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000301050.7
ENST00000536187.6
ENST00000540990.5
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR TCA 90 bp ACATGCCCTCCTTCCCCAAACCCCCATCCAGGTTGGCTCCCATCTGCCACTTGGGGGGCATCCCTTCCCTaGGTCTGGTGGGAAGGACCC +
Preference number: 4 (lower is better)
Translates to: TCPPSPNPHPGWLPSATWGASLP*VWWEGP
Trigger: GGGTCCTTCCCACCAGACTCAGGGAAGGGATGCCCC...CCAAGTGGCAGATGGGAGCCAACCTGGATGGGGGTTTGGGGAAGGAGGGCATGT
63% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR GCA 90 bp TGGGGCATCCCTTCCCTGAGTCTGGTGGGAAGGACCCTGCTAAGGGGATCCTGGGCCGCGAAGACCAGCTaGTCGGAGCTCAGATCACCG +
Preference number: 4 (lower is better)
Translates to: WGIPSLSLVGRTLLRGSWAAKTS*SELRSP
Trigger: CGGTGATCTGAGCTCCGAGCAGCTGGTCTTCGCGGC...CCAGGATCCCCTTAGCAGGGTCCTTCCCACCAGACTCAGGGAAGGGATGCCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301050.7
ENST00000547392.5
CDS-3UTR GCA 90 bp TACCTGGAATGGGAGCCTAGTAGGGGTCACTGCCCAGGAGGTGAGGGGGTCCCCTCTGCACTTCCGCAATaGTGGAGCGGGCAGAGGAGC +
Preference number: 4 (lower is better)
Translates to: YLEWEPSRGHCPGGEGVPSALPQ*WSGQRS
Trigger: GCTCCTCTGCCCGCTCCAGCATTGCGGAAGTGCAGA...GGGGACCCCCTCACCTCCTGGGCAGTGACCCCTACTAGGCTCCCATTCCAGGTA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000301050.7
ENST00000536187.6
ENST00000540990.5
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR GCA 90 bp CCAGGAGGTGAGGGGGTCCCCTGTTTCTCCCAGAACCTTGGGACCACAGGCAGCTCTGCACTTCCGCAATaGTGGAGCGGGCAGAGGAGC +
Preference number: 4 (lower is better)
Translates to: PGGEGVPCFSQNLGTTGSSALPQ*WSGQRS
Trigger: GCTCCTCTGCCCGCTCCAGCATTGCGGAAGTGCAGA...GCTGCCTGTGGTCCCAAGGTTCTGGGAGAAACAGGGGACCCCCTCACCTCCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000301050.7
ENST00000536187.6
ENST00000540990.5
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR GCA 90 bp CCAGGAGGTGAGGGGGTCCCCTGTTTCTCCCAGAACCTTGGGACCACAGGCAGCCGGTCTTGGGGGTCATaGCCGTTAGCACTAGGCAGC +
Preference number: 4 (lower is better)
Translates to: PGGEGVPCFSQNLGTTGSRSWGS*PLALGS
Trigger: GCTGCCTAGTGCTAACGGGCATGACCCCCAAGACCG...GCTGCCTGTGGTCCCAAGGTTCTGGGAGAAACAGGGGACCCCCTCACCTCCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000301050.7
ENST00000536187.6
ENST00000540990.5
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR GCA 90 bp TGGGGCATCCCTTCCCTGAGTCTGGTGGGAAGGACCCTGCTAAGGGGATCCTGGCCTAGTAGGGGTCACTaGCCAGGAGGTGAGGGGGTC +
Preference number: 4 (lower is better)
Translates to: WGIPSLSLVGRTLLRGSWPSRGH*PGGEGV
Trigger: GACCCCCTCACCTCCTGGGCAGTGACCCCTACTAGG...CCAGGATCCCCTTAGCAGGGTCCTTCCCACCAGACTCAGGGAAGGGATGCCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR GCA 90 bp GGTGCAGAACACACAGCTAGTACCTGGAATGGGAGCCTAGTAGGGGTCACTGCCACCCGGCCGCTGCTCTaGACGCTGCTCCCGCCTGCA +
Preference number: 4 (lower is better)
Translates to: GAEHTASTWNGSLVGVTATRPLL*TLLPPA
Trigger: TGCAGGCGGGAGCAGCGTGCAGAGCAGCGGCCGGGT...GGCAGTGACCCCTACTAGGCTCCCATTCCAGGTACTAGCTGTGTGTTCTGCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536187.6
CDS-3UTR GCA 90 bp GCCCGGATTGTTGAGCACAGATCGCTTTGCCAGGGAGAGGTCGGCTGTGACTCGGGGAGGCAGCAGCAGTaGTCACCAGGAGCTCTGCCC +
Preference number: 4 (lower is better)
Translates to: ARIVEHRSLCQGEVGCDSGRQQQ*SPGALP
Trigger: GGGCAGAGCTCCTGGTGAGCACTGCTGCTGCCTCCC...CGAGTCACAGCCGACCTCTCCCTGGCAAAGCGATCTGTGCTCAACAATCCGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550483.5
CDS-3UTR GCA 90 bp AGCCGGTCTTGGGGGTCATGCCCGTTAGCACTAGGCAGCCCCGAGGTGTGTTGGCCTCCAGGCCCTCCATaGTGGGCAAGAGCTCAGGAT +
Preference number: 4 (lower is better)
Translates to: SRSWGSCPLALGSPEVCWPPGPP*WARAQD
Trigger: ATCCTGAGCTCTTGCCCAGCATGGAGGGCCTGGAGG...CCAACACACCTCGGGGCTGCCTAGTGCTAACGGGCATGACCCCCAAGACCGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000551544.5
CDS-3UTR CCA 90 bp TGGGGCATCCCTTCCCTGAGTCTGGTGGGAAGGACCCTGCTAAGGGGATCCTGGCGAACCCGTGCTAGGTaGAAGGTGGGTCCCCGAGCA +
Preference number: 4 (lower is better)
Translates to: WGIPSLSLVGRTLLRGSWRTRAR*KVGPRA
Trigger: TGCTCGGGGACCCACCTTCCACCTAGCACGGGTTCG...CCAGGATCCCCTTAGCAGGGTCCTTCCCACCAGACTCAGGGAAGGGATGCCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301050.7
ENST00000547392.5
CDS-3UTR CCA 90 bp ACATGCCCTCCTTCCCCAAACCCCCATCCAGGTTGGCTCCCATCTGCCACTTGGATGCTCTCCAGGCGCTaGGGGCTGGGGATGAAGGCG +
Preference number: 4 (lower is better)
Translates to: TCPPSPNPHPGWLPSATWMLSRR*GLGMKA
Trigger: CGCCTTCATCCCCAGCCCCCAGCGCCTGGAGAGCAT...CCAAGTGGCAGATGGGAGCCAACCTGGATGGGGGTTTGGGGAAGGAGGGCATGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR CCA 90 bp CCAATGCTGGAGCGGGCAGAGGAGCGCTCAATGATGGTCCTCTTGCCCGGATTGATGCTCTCCAGGCGCTaGGGGCTGGGGATGAAGGCG +
Preference number: 4 (lower is better)
Translates to: PMLERAEERSMMVLLPGLMLSRR*GLGMKA
Trigger: CGCCTTCATCCCCAGCCCCCAGCGCCTGGAGAGCAT...CAATCCGGGCAAGAGGACCATCATTGAGCGCTCCTCTGCCCGCTCCAGCATTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550483.5
CDS-3UTR CCA 90 bp TACCTGGAATGGGAGCCTAGTAGGGGTCACTGCCCAGGAGGTGAGGGGGTCCCCGCACCACAGGCCGCATaGAGGGCACCACGTCATATG +
Preference number: 4 (lower is better)
Translates to: YLEWEPSRGHCPGGEGVPAPQAA*RAPRHM
Trigger: CATATGACGTGGTGCCCTCCATGCGGCCTGTGGTGC...GGGGACCCCCTCACCTCCTGGGCAGTGACCCCTACTAGGCTCCCATTCCAGGTA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000301050.7
ENST00000536187.6
ENST00000540990.5
ENST00000547230.5
ENST00000551544.5
CDS-3UTR CCA 90 bp CCAGGAGGTGAGGGGGTCCCCTGTTTCTCCCAGAACCTTGGGACCACAGGCAGCGGGCAGCTTCCTGTGTaGGAGGAGAGGAAGGTGCCA +
Preference number: 4 (lower is better)
Translates to: PGGEGVPCFSQNLGTTGSGQLPV*EERKVP
Trigger: TGGCACCTTCCTCTCCTCCCACACAGGAAGCTGCCC...GCTGCCTGTGGTCCCAAGGTTCTGGGAGAAACAGGGGACCCCCTCACCTCCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000301050.7
ENST00000536187.6
ENST00000540990.5
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR CCA 90 bp TACCTGGAATGGGAGCCTAGTAGGGGTCACTGCCCAGGAGGTGAGGGGGTCCCCGGGCAGCTTCCTGTGTaGGAGGAGAGGAAGGTGCCA +
Preference number: 4 (lower is better)
Translates to: YLEWEPSRGHCPGGEGVPGQLPV*EERKVP
Trigger: TGGCACCTTCCTCTCCTCCCACACAGGAAGCTGCCC...GGGGACCCCCTCACCTCCTGGGCAGTGACCCCTACTAGGCTCCCATTCCAGGTA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000301050.7
ENST00000536187.6
ENST00000540990.5
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR CCA 90 bp ACATGCCCTCCTTCCCCAAACCCCCATCCAGGTTGGCTCCCATCTGCCACTTGGGAGGGCACTGCCCAGTaGGGCAGCTTCCTGTGTGGG +
Preference number: 4 (lower is better)
Translates to: TCPPSPNPHPGWLPSATWEGTAQ*GSFLCG
Trigger: CCCACACAGGAAGCTGCCCCACTGGGCAGTGCCCTC...CCAAGTGGCAGATGGGAGCCAACCTGGATGGGGGTTTGGGGAAGGAGGGCATGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR CCA 90 bp CCCGTTAGCACTAGGCAGCCCCGAGGTGTGTTGGCGGTGAGGCTGGTACAGGTCCTGCTGCTCCAGTCTTaGATGTGGCTGCCACACCCC +
Preference number: 4 (lower is better)
Translates to: PVSTRQPRGVLAVRLVQVLLLQS*MWLPHP
Trigger: GGGGTGTGGCAGCCACATCCAAGACTGGAGCAGCAG...GACCTGTACCAGCCTCACCGCCAACACACCTCGGGGCTGCCTAGTGCTAACGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551544.5
CDS-3UTR TCA 90 bp CTAACAAGCGGCAGCTATGAGTCAGGGAACAAAGTCTGGAGCCCGGTTCTCCAACACCCCGAGCGCGGCTaGGGAATCTGGCGCCGGCTC +
Preference number: 4 (lower is better)
Translates to: LTSGSYESGNKVWSPVLQHPERG*GIWRRL
Trigger: GAGCCGGCGCCAGATTCCTCAGCCGCGCTCGGGGTG...TTGGAGAACCGGGCTCCAGACTTTGTTCCCTGACTCATAGCTGCCGCTTGTTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301050.7
CDS-3UTR TCA 90 bp CCAGGAGGTGAGGGGGTCCCCTGTTTCTCCCAGAACCTTGGGACCACAGGCAGCCAGAGGAGCGCTCAATaGTGGTCCTCTTGCCCGGAT +
Preference number: 4 (lower is better)
Translates to: PGGEGVPCFSQNLGTTGSQRSAQ*WSSCPD
Trigger: ATCCGGGCAAGAGGACCATCATTGAGCGCTCCTCTG...GCTGCCTGTGGTCCCAAGGTTCTGGGAGAAACAGGGGACCCCCTCACCTCCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000301050.7
ENST00000536187.6
ENST00000540990.5
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR TCA 90 bp TACCTGGAATGGGAGCCTAGTAGGGGTCACTGCCCAGGAGGTGAGGGGGTCCCCCAGAGGAGCGCTCAATaGTGGTCCTCTTGCCCGGAT +
Preference number: 4 (lower is better)
Translates to: YLEWEPSRGHCPGGEGVPQRSAQ*WSSCPD
Trigger: ATCCGGGCAAGAGGACCATCATTGAGCGCTCCTCTG...GGGGACCCCCTCACCTCCTGGGCAGTGACCCCTACTAGGCTCCCATTCCAGGTA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000301050.7
ENST00000536187.6
ENST00000540990.5
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR TCA 90 bp CCAGGAGGTGAGGGGGTCCCCTGTTTCTCCCAGAACCTTGGGACCACAGGCAGCCAGGTGCTTCATCTGTaGCTTCCCCCGGGAGCGAAT +
Preference number: 4 (lower is better)
Translates to: PGGEGVPCFSQNLGTTGSQVLHL*LPPGAN
Trigger: ATTCGCTCCCGGGGGAAGTCACAGATGAAGCACCTG...GCTGCCTGTGGTCCCAAGGTTCTGGGAGAAACAGGGGACCCCCTCACCTCCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000301050.7
ENST00000536187.6
ENST00000540990.5
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR TCA 90 bp GCCCTCCTTCCCCAAACCCCCATCCAGGTTGGCTCCCATCTGCCACTTGGCTTCGCGGGAGCTACGCTGTaGAGATCCTGTCCAGGCTTG +
Preference number: 4 (lower is better)
Translates to: ALLPQTPIQVGSHLPLGFAGATL*RSCPGL
Trigger: CAAGCCTGGACAGGATCTTCACAGCGTAGCTCCCGC...GAAGCCAAGTGGCAGATGGGAGCCAACCTGGATGGGGGTTTGGGGAAGGAGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR TCA 90 bp AGATCCTGTCCAGGCTTGGCGGGAGCTCTCGCTGGCCTCATCAGAGGGCATCAAGAGGTGTGTTGGCGGTaGGGCTGGTACAGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: RSCPGLAGALAGLIRGHQEVCWR*GWYRSW
Trigger: CCAGGACCTGTACCAGCCTCACCGCCAACACACCTC...TTGATGCCCTCTGATGAGGCCAGCGAGAGCTCCCGCCAAGCCTGGACAGGATCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551544.5
CDS-3UTR TCA 90 bp CAGCAGCTGCTGGTTCTGAAGTCCGGGGATGGCACTGGGAGGACCCAGAAGTCCCAAGAGCTTCAGCTGTaGGCTCTCTCTGGCCCGAGC +
Preference number: 4 (lower is better)
Translates to: QQLLVLKSGDGTGRTQKSQELQL*ALSGPS
Trigger: GCTCGGGCCAGAGAGAGCTCACAGCTGAAGCTCTTG...GGACTTCTGGGTCCTCCCAGTGCCATCCCCGGACTTCAGAACCAGCAGCTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551544.5
CDS-3UTR TCA 90 bp AGCCATAAGGCAAGAGTAGCCGGGGAGACAGGTCCTCTGTGCCCTGTCTCTCCCAGCTTCCTGGCAGGGTaGGGAGAGCCCTTCCCTCCA +
Preference number: 4 (lower is better)
Translates to: SHKARVAGETGPLCPVSPSFLAG*GEPFPP
Trigger: TGGAGGGAAGGGCTCTCCTCACCCTGCCAGGAAGCT...GGGAGAGACAGGGCACAGAGGACCTGTCTCCCCGGCTACTCTTGCCTTATGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR TCA 90 bp CCCCAAACCCCCATCCAGGTTGGCTCCCATCTGCCACTTGGCTTCACCATGCTCAGCTTCCTGGCAGGGTaGGGAGAGCCCTTCCCTCCA +
Preference number: 4 (lower is better)
Translates to: PQTPIQVGSHLPLGFTMLSFLAG*GEPFPP
Trigger: TGGAGGGAAGGGCTCTCCTCACCCTGCCAGGAAGCT...GAGCATGGTGAAGCCAAGTGGCAGATGGGAGCCAACCTGGATGGGGGTTTGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR GCA 90 bp CCAGGAGGTGAGGGGGTCCCCTGTTTCTCCCAGAACCTTGGGACCACAGGCAGCGAGCACAGATCGCTTTaGCAGGGAGAGGTCGGCTGT +
Preference number: 4 (lower is better)
Translates to: PGGEGVPCFSQNLGTTGSEHRSL*QGEVGC
Trigger: ACAGCCGACCTCTCCCTGGCAAAGCGATCTGTGCTC...GCTGCCTGTGGTCCCAAGGTTCTGGGAGAAACAGGGGACCCCCTCACCTCCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000301050.7
ENST00000536187.6
ENST00000540990.5
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR GCA 90 bp TGGGGCATCCCTTCCCTGAGTCTGGTGGGAAGGACCCTGCTAAGGGGATCCTGGCGGTCTTGGGGGTCATaGCCGTTAGCACTAGGCAGC +
Preference number: 4 (lower is better)
Translates to: WGIPSLSLVGRTLLRGSWRSWGS*PLALGS
Trigger: GCTGCCTAGTGCTAACGGGCATGACCCCCAAGACCG...CCAGGATCCCCTTAGCAGGGTCCTTCCCACCAGACTCAGGGAAGGGATGCCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR GCA 90 bp AGGCCCTGGATGCCAAAGCAGTCCCTTGACTGTCAGGACTTGTGCCTGCTCAGGAGCTGCGCCTGTGCCTaGCAGGGTAGGGCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: RPWMPKQSLDCQDLCLLRSCACA*QGRAAG
Trigger: TCCTGCTGCCCTACCCTGGCAGGCACAGGCGCAGCT...CCTGAGCAGGCACAAGTCCTGACAGTCAAGGGACTGCTTTGGCATCCAGGGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR CCA 90 bp CCCCAAACCCCCATCCAGGTTGGCTCCCATCTGCCACTTGGCTTCACCATGCTCAGGAGTCGTCATACATaGGGGAGTCCGGGTCGGGGG +
Preference number: 4 (lower is better)
Translates to: PQTPIQVGSHLPLGFTMLRSRHT*GSPGRG
Trigger: CCCCCGACCCGGACTCCCCCATGTATGACGACTCCT...GAGCATGGTGAAGCCAAGTGGCAGATGGGAGCCAACCTGGATGGGGGTTTGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR CCA 90 bp TACCTGGAATGGGAGCCTAGTAGGGGTCACTGCCCAGGAGGTGAGGGGGTCCCCTTGACTCCAGAGCCCTaGACTGGGCACTCCTCATCC +
Preference number: 4 (lower is better)
Translates to: YLEWEPSRGHCPGGEGVPLTPEP*TGHSSS
Trigger: GGATGAGGAGTGCCCAGTCCAGGGCTCTGGAGTCAA...GGGGACCCCCTCACCTCCTGGGCAGTGACCCCTACTAGGCTCCCATTCCAGGTA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000301050.7
ENST00000536187.6
ENST00000540990.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR CCA 90 bp AGGCCCTGGATGCCAAAGCAGTCCCTTGACTGTCAGGACTTGTGCCTGCTCAGGATGCTCTCCAGGCGCTaGGGGCTGGGGATGAAGGCG +
Preference number: 4 (lower is better)
Translates to: RPWMPKQSLDCQDLCLLRMLSRR*GLGMKA
Trigger: CGCCTTCATCCCCAGCCCCCAGCGCCTGGAGAGCAT...CCTGAGCAGGCACAAGTCCTGACAGTCAAGGGACTGCTTTGGCATCCAGGGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR CCA 90 bp CATAAGGCAAGAGTAGCCGGGGAGACAGGTCCTCTGTGCCCTGTCTCTCCCCATATGCTCTCCAGGCGCTaGGGGCTGGGGATGAAGGCG +
Preference number: 4 (lower is better)
Translates to: HKARVAGETGPLCPVSPHMLSRR*GLGMKA
Trigger: CGCCTTCATCCCCAGCCCCCAGCGCCTGGAGAGCAT...ATGGGGAGAGACAGGGCACAGAGGACCTGTCTCCCCGGCTACTCTTGCCTTATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR CCA 90 bp TTCCCCAAACCCCCATCCAGGTTGGCTCCCATCTGCCACTTGGCTTCACCATGCGTCCGGGGATGGCACTaGGAGGACCCAGAAGTCCGG +
Preference number: 4 (lower is better)
Translates to: FPKPPSRLAPICHLASPCVRGWH*EDPEVR
Trigger: CCGGACTTCTGGGTCCTCCCAGTGCCATCCCCGGAC...GCATGGTGAAGCCAAGTGGCAGATGGGAGCCAACCTGGATGGGGGTTTGGGGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR CCA 90 bp TACCTGGAATGGGAGCCTAGTAGGGGTCACTGCCCAGGAGGTGAGGGGGTCCCCTCTGAAGTCCGGGGATaGCACTGGGAGGACCCAGAA +
Preference number: 4 (lower is better)
Translates to: YLEWEPSRGHCPGGEGVPSEVRG*HWEDPE
Trigger: TTCTGGGTCCTCCCAGTGCCATCCCCGGACTTCAGA...GGGGACCCCCTCACCTCCTGGGCAGTGACCCCTACTAGGCTCCCATTCCAGGTA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000301050.7
ENST00000536187.6
ENST00000540990.5
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR CCA 90 bp CCAGGAGGTGAGGGGGTCCCCTGTTTCTCCCAGAACCTTGGGACCACAGGCAGCTCTGAAGTCCGGGGATaGCACTGGGAGGACCCAGAA +
Preference number: 4 (lower is better)
Translates to: PGGEGVPCFSQNLGTTGSSEVRG*HWEDPE
Trigger: TTCTGGGTCCTCCCAGTGCCATCCCCGGACTTCAGA...GCTGCCTGTGGTCCCAAGGTTCTGGGAGAAACAGGGGACCCCCTCACCTCCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000301050.7
ENST00000536187.6
ENST00000540990.5
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR CCA 90 bp AGCCATAAGGCAAGAGTAGCCGGGGAGACAGGTCCTCTGTGCCCTGTCTCTCCCGGCGGGAGCTCTCGCTaGCCTCATCAGAGGGCATCA +
Preference number: 4 (lower is better)
Translates to: SHKARVAGETGPLCPVSPGGSSR*PHQRAS
Trigger: TGATGCCCTCTGATGAGGCCAGCGAGAGCTCCCGCC...GGGAGAGACAGGGCACAGAGGACCTGTCTCCCCGGCTACTCTTGCCTTATGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR CCA 90 bp TGCTCCAGTCTTGGATGTGGCTGCCACACCCCAGCAAACAGATGGGTGTGCCACGATCCTGTCCAGGCTTaGCGGGAGCTCTCGCTGGCC +
Preference number: 4 (lower is better)
Translates to: CSSLGCGCHTPANRWVCHDPVQA*RELSLA
Trigger: GGCCAGCGAGAGCTCCCGCCAAGCCTGGACAGGATC...GTGGCACACCCATCTGTTTGCTGGGGTGTGGCAGCCACATCCAAGACTGGAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR CCA 90 bp TACCTGGAATGGGAGCCTAGTAGGGGTCACTGCCCAGGAGGTGAGGGGGTCCCCGCTAGAAGCCGGTCTTaGGGGTCATGCCCGTTAGCA +
Preference number: 4 (lower is better)
Translates to: YLEWEPSRGHCPGGEGVPARSRS*GSCPLA
Trigger: TGCTAACGGGCATGACCCCCAAGACCGGCTTCTAGC...GGGGACCCCCTCACCTCCTGGGCAGTGACCCCTACTAGGCTCCCATTCCAGGTA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000301050.7
ENST00000536187.6
ENST00000540990.5
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR CCA 90 bp CCCGTTAGCACTAGGCAGCCCCGAGGTGTGTTGGCGGTGAGGCTGGTACAGGTCGCTAGAAGCCGGTCTTaGGGGTCATGCCCGTTAGCA +
Preference number: 4 (lower is better)
Translates to: PVSTRQPRGVLAVRLVQVARSRS*GSCPLA
Trigger: TGCTAACGGGCATGACCCCCAAGACCGGCTTCTAGC...GACCTGTACCAGCCTCACCGCCAACACACCTCGGGGCTGCCTAGTGCTAACGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551544.5
CDS-3UTR CCA 90 bp CCAGGAGGTGAGGGGGTCCCCTGTTTCTCCCAGAACCTTGGGACCACAGGCAGCGTCAGTAGCTATCCTTaGGCCAAGGCCGGTTGCGCT +
Preference number: 4 (lower is better)
Translates to: PGGEGVPCFSQNLGTTGSVSSYP*AKAGCA
Trigger: AGCGCAACCGGCCTTGGCCCAAGGATAGCTACTGAC...GCTGCCTGTGGTCCCAAGGTTCTGGGAGAAACAGGGGACCCCCTCACCTCCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000301050.7
ENST00000536187.6
ENST00000540990.5
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR CCA 90 bp CTGAGTCTGGTGGGAAGGACCCTGCTAAGGGGATCCTGGCCTGAGGGCACTGCCGTCAGTAGCTATCCTTaGGCCAAGGCCGGTTGCGCT +
Preference number: 4 (lower is better)
Translates to: LSLVGRTLLRGSWPEGTAVSSYP*AKAGCA
Trigger: AGCGCAACCGGCCTTGGCCCAAGGATAGCTACTGAC...GGCAGTGCCCTCAGGCCAGGATCCCCTTAGCAGGGTCCTTCCCACCAGACTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR CCA 90 bp TACCTGGAATGGGAGCCTAGTAGGGGTCACTGCCCAGGAGGTGAGGGGGTCCCCGGTGACTGGAGGCCCTaGATGCCAAAGCAGTCCCTT +
Preference number: 4 (lower is better)
Translates to: YLEWEPSRGHCPGGEGVPGDWRP*MPKQSL
Trigger: AAGGGACTGCTTTGGCATCCAGGGCCTCCAGTCACC...GGGGACCCCCTCACCTCCTGGGCAGTGACCCCTACTAGGCTCCCATTCCAGGTA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR CCA 90 bp ACTGGAGGCCCTGGATGCCAAAGCAGTCCCTTGACTGTCAGGACTTGTGCCTGCGCTGTGAGCTCTCTCTaGCCCGAGCGTGGCCAGCCT +
Preference number: 4 (lower is better)
Translates to: TGGPGCQSSPLTVRTCACAVSSL*PERGQP
Trigger: AGGCTGGCCACGCTCGGGCCAGAGAGAGCTCACAGC...GCAGGCACAAGTCCTGACAGTCAAGGGACTGCTTTGGCATCCAGGGCCTCCAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR CCA 90 bp CTGCTCCAGTCTTGGATGTGGCTGCCACACCCCAGCAAACAGATGGGTGTGCCAGCTGTGAGCTCTCTCTaGCCCGAGCGTGGCCAGCCT +
Preference number: 4 (lower is better)
Translates to: LLQSWMWLPHPSKQMGVPAVSSL*PERGQP
Trigger: AGGCTGGCCACGCTCGGGCCAGAGAGAGCTCACAGC...TGGCACACCCATCTGTTTGCTGGGGTGTGGCAGCCACATCCAAGACTGGAGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
3UTR CAA 72 bp GTCATGCCCGTTAGCACTAGGCAGCCCCGAGGTGTGTaGGCGGTGAGGCTGGTACAGGTCCTGGTAGGCATC +
Preference number: 4 (lower is better)
Translates to: VMPVSTRQPRGV*AVRLVQVLVGI
Trigger: GATGCCTACCAGGACCTGTACCAGCCTCACCGCCAACACACCTCGGGGCTGCCTAGTGCTAACGGGCATGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551544.5
3UTR CAA 72 bp CAAGGCCGGTTGCGCTGCCAGTTCCGGTCACTGTGGTaGTGCTCTGAGTCCTGGGCTAGAAGCCGGTCTTGG +
Preference number: 4 (lower is better)
Translates to: QGRLRCQFRSLW*CSESWARSRSW
Trigger: CCAAGACCGGCTTCTAGCCCAGGACTCAGAGCACAACCACAGTGACCGGAACTGGCAGCGCAACCGGCCTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551544.5
CDS-3UTR TCA 90 bp CCAGGAGGTGAGGGGGTCCCCTGTTTCTCCCAGAACCTTGGGACCACAGGCAGCCTTTCGAGCTGCTGCTaGGCCTGGCTCTCTACTTCA +
Preference number: 4 (lower is better)
Translates to: PGGEGVPCFSQNLGTTGSLSSCC*AWLSTS
Trigger: TGAAGTAGAGAGCCAGGCTCAGCAGCAGCTCGAAAG...GCTGCCTGTGGTCCCAAGGTTCTGGGAGAAACAGGGGACCCCCTCACCTCCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000301050.7
ENST00000536187.6
ENST00000540990.5
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR TCA 90 bp CCAGGAGGTGAGGGGGTCCCCTGTTTCTCCCAGAACCTTGGGACCACAGGCAGCCTTTGGCCTCAAAGTTaGCTCCAGAGCCCTGGACTG +
Preference number: 4 (lower is better)
Translates to: PGGEGVPCFSQNLGTTGSLWPQS*LQSPGL
Trigger: CAGTCCAGGGCTCTGGAGTCAACTTTGAGGCCAAAG...GCTGCCTGTGGTCCCAAGGTTCTGGGAGAAACAGGGGACCCCCTCACCTCCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301050.7
ENST00000536187.6
ENST00000540990.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR TCA 90 bp TACCTGGAATGGGAGCCTAGTAGGGGTCACTGCCCAGGAGGTGAGGGGGTCCCCCTTTGGCCTCAAAGTTaGCTCCAGAGCCCTGGACTG +
Preference number: 4 (lower is better)
Translates to: YLEWEPSRGHCPGGEGVPLWPQS*LQSPGL
Trigger: CAGTCCAGGGCTCTGGAGTCAACTTTGAGGCCAAAG...GGGGACCCCCTCACCTCCTGGGCAGTGACCCCTACTAGGCTCCCATTCCAGGTA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000301050.7
ENST00000536187.6
ENST00000540990.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR TCA 90 bp GCCCGGATTGTTGAGCACAGATCGCTTTGCCAGGGAGAGGTCGGCTGTGACTCGCCTTCTGCTCCTGTTTaGGCCGGATGCTCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: ARIVEHRSLCQGEVGCDSPSAPV*AGCSPG
Trigger: GCCTGGAGAGCATCCGGCTCAAACAGGAGCAGAAGG...CGAGTCACAGCCGACCTCTCCCTGGCAAAGCGATCTGTGCTCAACAATCCGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000550483.5
ENST00000551544.5
CDS-3UTR TCA 90 bp GCCCTCCTTCCCCAAACCCCCATCCAGGTTGGCTCCCATCTGCCACTTGGCTTCCAGAGGAGCGCTCAATaGTGGTCCTCTTGCCCGGAT +
Preference number: 4 (lower is better)
Translates to: ALLPQTPIQVGSHLPLGFQRSAQ*WSSCPD
Trigger: ATCCGGGCAAGAGGACCATCATTGAGCGCTCCTCTG...GAAGCCAAGTGGCAGATGGGAGCCAACCTGGATGGGGGTTTGGGGAAGGAGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR TCA 90 bp TACCTGGAATGGGAGCCTAGTAGGGGTCACTGCCCAGGAGGTGAGGGGGTCCCCGACTCCGGTGGGCACTaGACCAGCTTATCATATGCC +
Preference number: 4 (lower is better)
Translates to: YLEWEPSRGHCPGGEGVPDSGGH*TSLSYA
Trigger: GGCATATGATAAGCTGGTTCAGTGCCCACCGGAGTC...GGGGACCCCCTCACCTCCTGGGCAGTGACCCCTACTAGGCTCCCATTCCAGGTA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000301050.7
ENST00000536187.6
ENST00000540990.5
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR TCA 90 bp CCAGGAGGTGAGGGGGTCCCCTGTTTCTCCCAGAACCTTGGGACCACAGGCAGCGACTCCGGTGGGCACTaGACCAGCTTATCATATGCC +
Preference number: 4 (lower is better)
Translates to: PGGEGVPCFSQNLGTTGSDSGGH*TSLSYA
Trigger: GGCATATGATAAGCTGGTTCAGTGCCCACCGGAGTC...GCTGCCTGTGGTCCCAAGGTTCTGGGAGAAACAGGGGACCCCCTCACCTCCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000301050.7
ENST00000536187.6
ENST00000540990.5
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR TCA 90 bp CTGAGTCTGGTGGGAAGGACCCTGCTAAGGGGATCCTGGCCTGAGGGCACTGCCGCCAAAGCAGTCCCTTaGCTGTCAGGACTTGTGCCT +
Preference number: 4 (lower is better)
Translates to: LSLVGRTLLRGSWPEGTAAKAVP*LSGLVP
Trigger: AGGCACAAGTCCTGACAGTCAAGGGACTGCTTTGGC...GGCAGTGCCCTCAGGCCAGGATCCCCTTAGCAGGGTCCTTCCCACCAGACTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR TCA 90 bp TACCTGGAATGGGAGCCTAGTAGGGGTCACTGCCCAGGAGGTGAGGGGGTCCCCGCCAAAGCAGTCCCTTaGCTGTCAGGACTTGTGCCT +
Preference number: 4 (lower is better)
Translates to: YLEWEPSRGHCPGGEGVPAKAVP*LSGLVP
Trigger: AGGCACAAGTCCTGACAGTCAAGGGACTGCTTTGGC...GGGGACCCCCTCACCTCCTGGGCAGTGACCCCTACTAGGCTCCCATTCCAGGTA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR TCA 90 bp CTGAGTCTGGTGGGAAGGACCCTGCTAAGGGGATCCTGGCCTGAGGGCACTGCCTCTAATGTATGGCAGTaGGGTGACTGGAGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: LSLVGRTLLRGSWPEGTASNVWQ*GDWRPW
Trigger: CCAGGGCCTCCAGTCACCTCACTGCCATACATTAGA...GGCAGTGCCCTCAGGCCAGGATCCCCTTAGCAGGGTCCTTCCCACCAGACTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR TCA 90 bp AGCCGGTCTTGGGGGTCATGCCCGTTAGCACTAGGCAGCCCCGAGGTGTGTTGGTGCAGGGCAAAAGAATaGGAAAGGCAAGGAGGCCCC +
Preference number: 4 (lower is better)
Translates to: SRSWGSCPLALGSPEVCWCRAKE*ERQGGP
Trigger: GGGGCCTCCTTGCCTTTCTCATTCTTTTGCCCTGCA...CCAACACACCTCGGGGCTGCCTAGTGCTAACGGGCATGACCCCCAAGACCGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000551544.5
CDS-3UTR GCA 90 bp TACCTGGAATGGGAGCCTAGTAGGGGTCACTGCCCAGGAGGTGAGGGGGTCCCCGGTCCTCACCGCAAATaGCACAGGTTTGTGCTTGGC +
Preference number: 4 (lower is better)
Translates to: YLEWEPSRGHCPGGEGVPGPHRK*HRFVLG
Trigger: GCCAAGCACAAACCTGTGGCATTTGCGGTGAGGACC...GGGGACCCCCTCACCTCCTGGGCAGTGACCCCTACTAGGCTCCCATTCCAGGTA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000301050.7
ENST00000536187.6
ENST00000540990.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR GCA 90 bp CCAGGAGGTGAGGGGGTCCCCTGTTTCTCCCAGAACCTTGGGACCACAGGCAGCGATCTCCTGGCCTTCTaGTCCTGTTTGAGCCGGATG +
Preference number: 4 (lower is better)
Translates to: PGGEGVPCFSQNLGTTGSDLLAF*SCLSRM
Trigger: CATCCGGCTCAAACAGGAGCAGAAGGCCAGGAGATC...GCTGCCTGTGGTCCCAAGGTTCTGGGAGAAACAGGGGACCCCCTCACCTCCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000301050.7
ENST00000536187.6
ENST00000540990.5
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR GCA 90 bp CATATGGGGGAACATGTTCCGCCTAGAGATGGCGGAGGGGAGCGTCGGTTGCCAGAGGGGAGCGTCGGTTaGCAATGTCACTCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: HMGEHVPPRDGGGERRLPEGSVG*QCHSGW
Trigger: CCAGCCTGAGTGACATTGGCAACCGACGCTCCCCTC...TGGCAACCGACGCTCCCCTCCGCCATCTCTAGGCGGAACATGTTCCCCCATATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000548874.5
CDS-3UTR GCA 90 bp CCAGGAGGTGAGGGGGTCCCCTGTTTCTCCCAGAACCTTGGGACCACAGGCAGCCGCTCGATCTCACTCTaGACTTCCGCAATGCTGGAG +
Preference number: 4 (lower is better)
Translates to: PGGEGVPCFSQNLGTTGSRSISL*TSAMLE
Trigger: CTCCAGCATTGCGGAAGTGCAGAGTGAGATCGAGCG...GCTGCCTGTGGTCCCAAGGTTCTGGGAGAAACAGGGGACCCCCTCACCTCCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000301050.7
ENST00000536187.6
ENST00000540990.5
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR GCA 90 bp TACCTGGAATGGGAGCCTAGTAGGGGTCACTGCCCAGGAGGTGAGGGGGTCCCCGTCCTGGTAGGCATCTaGATAGTCCTCCTCCAGGTG +
Preference number: 4 (lower is better)
Translates to: YLEWEPSRGHCPGGEGVPVLVGI*IVLLQV
Trigger: CACCTGGAGGAGGACTATGCAGATGCCTACCAGGAC...GGGGACCCCCTCACCTCCTGGGCAGTGACCCCTACTAGGCTCCCATTCCAGGTA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000301050.7
ENST00000536187.6
ENST00000540990.5
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR GCA 90 bp CCCCAGCAGCTGCTGGTTCTGAAGTCCGGGGATGGCACTGGGAGGACCCAGAAGGTCCTGGTAGGCATCTaGATAGTCCTCCTCCAGGTG +
Preference number: 4 (lower is better)
Translates to: PQQLLVLKSGDGTGRTQKVLVGI*IVLLQV
Trigger: CACCTGGAGGAGGACTATGCAGATGCCTACCAGGAC...CTTCTGGGTCCTCCCAGTGCCATCCCCGGACTTCAGAACCAGCAGCTGCTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551544.5
CDS-3UTR GCA 90 bp AGGCCCTGGATGCCAAAGCAGTCCCTTGACTGTCAGGACTTGTGCCTGCTCAGGCCTAGTAGGGGTCACTaGCCAGGAGGTGAGGGGGTC +
Preference number: 4 (lower is better)
Translates to: RPWMPKQSLDCQDLCLLRPSRGH*PGGEGV
Trigger: GACCCCCTCACCTCCTGGGCAGTGACCCCTACTAGG...CCTGAGCAGGCACAAGTCCTGACAGTCAAGGGACTGCTTTGGCATCCAGGGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR GCA 90 bp CTGAGTCTGGTGGGAAGGACCCTGCTAAGGGGATCCTGGCCTGAGGGCACTGCCTTCCTCATGCCATGGTaGCCACACCCCACCCTTTTG +
Preference number: 4 (lower is better)
Translates to: LSLVGRTLLRGSWPEGTAFLMPW*PHPTLL
Trigger: CAAAAGGGTGGGGTGTGGGCACCATGGCATGAGGAA...GGCAGTGCCCTCAGGCCAGGATCCCCTTAGCAGGGTCCTTCCCACCAGACTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR GCA 90 bp CTGAGTCTGGTGGGAAGGACCCTGCTAAGGGGATCCTGGCCTGAGGGCACTGCCACTGGAGGCCCTGGATaGCAAAGCAGTCCCTTGACT +
Preference number: 4 (lower is better)
Translates to: LSLVGRTLLRGSWPEGTATGGPG*QSSPLT
Trigger: AGTCAAGGGACTGCTTTGGCATCCAGGGCCTCCAGT...GGCAGTGCCCTCAGGCCAGGATCCCCTTAGCAGGGTCCTTCCCACCAGACTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR GCA 90 bp CCCCAGCAGCTGCTGGTTCTGAAGTCCGGGGATGGCACTGGGAGGACCCAGAAGACTGGAGGCCCTGGATaGCAAAGCAGTCCCTTGACT +
Preference number: 4 (lower is better)
Translates to: PQQLLVLKSGDGTGRTQKTGGPG*QSSPLT
Trigger: AGTCAAGGGACTGCTTTGGCATCCAGGGCCTCCAGT...CTTCTGGGTCCTCCCAGTGCCATCCCCGGACTTCAGAACCAGCAGCTGCTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551544.5
CDS-3UTR GCA 90 bp ACTGGAGGCCCTGGATGCCAAAGCAGTCCCTTGACTGTCAGGACTTGTGCCTGCGCTCAGGATGCCCGCTaGAGAGGAAGCCTCAGCAGG +
Preference number: 4 (lower is better)
Translates to: TGGPGCQSSPLTVRTCACAQDAR*RGSLSR
Trigger: CCTGCTGAGGCTTCCTCTGCAGCGGGCATCCTGAGC...GCAGGCACAAGTCCTGACAGTCAAGGGACTGCTTTGGCATCCAGGGCCTCCAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551544.5
CDS-3UTR GCA 90 bp AGCCGGTCTTGGGGGTCATGCCCGTTAGCACTAGGCAGCCCCGAGGTGTGTTGGGCTGCTCCGCATTCTTaGCCCATCTTTCCAGGCACT +
Preference number: 4 (lower is better)
Translates to: SRSWGSCPLALGSPEVCWAAPHS*PIFPGT
Trigger: AGTGCCTGGAAAGATGGGGCAAGAATGCGGAGCAGC...CCAACACACCTCGGGGCTGCCTAGTGCTAACGGGCATGACCCCCAAGACCGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000551544.5
CDS-3UTR CCA 90 bp TACCTGGAATGGGAGCCTAGTAGGGGTCACTGCCCAGGAGGTGAGGGGGTCCCCCCACAGGTTTGTGCTTaGCCCTTTCGAGCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: YLEWEPSRGHCPGGEGVPPQVCA*PFRAAA
Trigger: AGCAGCAGCTCGAAAGGGCCAAGCACAAACCTGTGG...GGGGACCCCCTCACCTCCTGGGCAGTGACCCCTACTAGGCTCCCATTCCAGGTA
61% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000301050.7
ENST00000536187.6
ENST00000540990.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR CCA 90 bp TGGGGCATCCCTTCCCTGAGTCTGGTGGGAAGGACCCTGCTAAGGGGATCCTGGTCCAGAGCCCTGGACTaGGCACTCCTCATCCAGTAC +
Preference number: 4 (lower is better)
Translates to: WGIPSLSLVGRTLLRGSWSRALD*ALLIQY
Trigger: GTACTGGATGAGGAGTGCCCAGTCCAGGGCTCTGGA...CCAGGATCCCCTTAGCAGGGTCCTTCCCACCAGACTCAGGGAAGGGATGCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547392.5
ENST00000551544.5
CDS-3UTR CCA 90 bp GCAGAACACACAGCTAGTACCTGGAATGGGAGCCTAGTAGGGGTCACTGCCCAGATGCTCTCCAGGCGCTaGGGGCTGGGGATGAAGGCG +
Preference number: 4 (lower is better)
Translates to: AEHTASTWNGSLVGVTAQMLSRR*GLGMKA
Trigger: CGCCTTCATCCCCAGCCCCCAGCGCCTGGAGAGCAT...CTGGGCAGTGACCCCTACTAGGCTCCCATTCCAGGTACTAGCTGTGTGTTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000301050.7
ENST00000536187.6
ENST00000540990.5
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR CCA 90 bp TTGTTGAGCACAGATCGCTTTGCCAGGGAGAGGTCGGCTGTGACTCGGGTGATGATGCTCTCCAGGCGCTaGGGGCTGGGGATGAAGGCG +
Preference number: 4 (lower is better)
Translates to: LLSTDRFARERSAVTRVMMLSRR*GLGMKA
Trigger: CGCCTTCATCCCCAGCCCCCAGCGCCTGGAGAGCAT...CATCACCCGAGTCACAGCCGACCTCTCCCTGGCAAAGCGATCTGTGCTCAACAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000550391.5
ENST00000550483.5
ENST00000551544.5
CDS-3UTR CCA 90 bp ACATGCCCTCCTTCCCCAAACCCCCATCCAGGTTGGCTCCCATCTGCCACTTGGGCACCACAGGCCGCATaGAGGGCACCACGTCATATG +
Preference number: 4 (lower is better)
Translates to: TCPPSPNPHPGWLPSATWAPQAA*RAPRHM
Trigger: CATATGACGTGGTGCCCTCCATGCGGCCTGTGGTGC...CCAAGTGGCAGATGGGAGCCAACCTGGATGGGGGTTTGGGGAAGGAGGGCATGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR CCA 90 bp CATATGGGGGAACATGTTCCGCCTAGAGATGGCGGAGGGGAGCGTCGGTTGCCAGCACCACAGGCCGCATaGAGGGCACCACGTCATATG +
Preference number: 4 (lower is better)
Translates to: HMGEHVPPRDGGGERRLPAPQAA*RAPRHM
Trigger: CATATGACGTGGTGCCCTCCATGCGGCCTGTGGTGC...TGGCAACCGACGCTCCCCTCCGCCATCTCTAGGCGGAACATGTTCCCCCATATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000548874.5
CDS-3UTR CCA 90 bp GGTGCAGAACACACAGCTAGTACCTGGAATGGGAGCCTAGTAGGGGTCACTGCCGTCCGGGGATGGCACTaGGAGGACCCAGAAGTCCGG +
Preference number: 4 (lower is better)
Translates to: GAEHTASTWNGSLVGVTAVRGWH*EDPEVR
Trigger: CCGGACTTCTGGGTCCTCCCAGTGCCATCCCCGGAC...GGCAGTGACCCCTACTAGGCTCCCATTCCAGGTACTAGCTGTGTGTTCTGCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000301050.7
ENST00000536187.6
ENST00000540990.5
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR CCA 90 bp ATCTGTACGGTCAGGTGCTTCATCTGTGACTTCCCCCGGGAGCGAATGAGACGCGTCCGGGGATGGCACTaGGAGGACCCAGAAGTCCGG +
Preference number: 4 (lower is better)
Translates to: ICTVRCFICDFPRERMRRVRGWH*EDPEVR
Trigger: CCGGACTTCTGGGTCCTCCCAGTGCCATCCCCGGAC...GCGTCTCATTCGCTCCCGGGGGAAGTCACAGATGAAGCACCTGACCGTACAGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000551544.5
CDS-3UTR CCA 90 bp CATAAGGCAAGAGTAGCCGGGGAGACAGGTCCTCTGTGCCCTGTCTCTCCCCATGGCGGGAGCTCTCGCTaGCCTCATCAGAGGGCATCA +
Preference number: 4 (lower is better)
Translates to: HKARVAGETGPLCPVSPHGGSSR*PHQRAS
Trigger: TGATGCCCTCTGATGAGGCCAGCGAGAGCTCCCGCC...ATGGGGAGAGACAGGGCACAGAGGACCTGTCTCCCCGGCTACTCTTGCCTTATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR CCA 90 bp GCAGAACACACAGCTAGTACCTGGAATGGGAGCCTAGTAGGGGTCACTGCCCAGGATCCTGTCCAGGCTTaGCGGGAGCTCTCGCTGGCC +
Preference number: 4 (lower is better)
Translates to: AEHTASTWNGSLVGVTAQDPVQA*RELSLA
Trigger: GGCCAGCGAGAGCTCCCGCCAAGCCTGGACAGGATC...CTGGGCAGTGACCCCTACTAGGCTCCCATTCCAGGTACTAGCTGTGTGTTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301050.7
ENST00000536187.6
ENST00000540990.5
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR CCA 90 bp TGGGGCATCCCTTCCCTGAGTCTGGTGGGAAGGACCCTGCTAAGGGGATCCTGGGCTAGAAGCCGGTCTTaGGGGTCATGCCCGTTAGCA +
Preference number: 4 (lower is better)
Translates to: WGIPSLSLVGRTLLRGSWARSRS*GSCPLA
Trigger: TGCTAACGGGCATGACCCCCAAGACCGGCTTCTAGC...CCAGGATCCCCTTAGCAGGGTCCTTCCCACCAGACTCAGGGAAGGGATGCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR CCA 90 bp CCAGGAGGTGAGGGGGTCCCCTGTTTCTCCCAGAACCTTGGGACCACAGGCAGCTTGTGCTCTGAGTCCTaGGCTAGAAGCCGGTCTTGG +
Preference number: 4 (lower is better)
Translates to: PGGEGVPCFSQNLGTTGSLCSES*ARSRSW
Trigger: CCAAGACCGGCTTCTAGCCCAGGACTCAGAGCACAA...GCTGCCTGTGGTCCCAAGGTTCTGGGAGAAACAGGGGACCCCCTCACCTCCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000301050.7
ENST00000536187.6
ENST00000540990.5
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR CCA 90 bp CCAGGAGGTGAGGGGGTCCCCTGTTTCTCCCAGAACCTTGGGACCACAGGCAGCCAGTTCCGGTCACTGTaGTTGTGCTCTGAGTCCTGG +
Preference number: 4 (lower is better)
Translates to: PGGEGVPCFSQNLGTTGSQFRSL*LCSESW
Trigger: CCAGGACTCAGAGCACAACCACAGTGACCGGAACTG...GCTGCCTGTGGTCCCAAGGTTCTGGGAGAAACAGGGGACCCCCTCACCTCCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000301050.7
ENST00000536187.6
ENST00000540990.5
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR CCA 90 bp TACCTGGAATGGGAGCCTAGTAGGGGTCACTGCCCAGGAGGTGAGGGGGTCCCCCAGTTCCGGTCACTGTaGTTGTGCTCTGAGTCCTGG +
Preference number: 4 (lower is better)
Translates to: YLEWEPSRGHCPGGEGVPQFRSL*LCSESW
Trigger: CCAGGACTCAGAGCACAACCACAGTGACCGGAACTG...GGGGACCCCCTCACCTCCTGGGCAGTGACCCCTACTAGGCTCCCATTCCAGGTA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000301050.7
ENST00000536187.6
ENST00000540990.5
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR CCA 90 bp GGTGCAGAACACACAGCTAGTACCTGGAATGGGAGCCTAGTAGGGGTCACTGCCGAGGGCACTGCCCAGTaGGGCAGCTTCCTGTGTGGG +
Preference number: 4 (lower is better)
Translates to: GAEHTASTWNGSLVGVTAEGTAQ*GSFLCG
Trigger: CCCACACAGGAAGCTGCCCCACTGGGCAGTGCCCTC...GGCAGTGACCCCTACTAGGCTCCCATTCCAGGTACTAGCTGTGTGTTCTGCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301050.7
ENST00000536187.6
ENST00000540990.5
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR CCA 90 bp GCAGAACACACAGCTAGTACCTGGAATGGGAGCCTAGTAGGGGTCACTGCCCAGGAGGGCACTGCCCAGTaGGGCAGCTTCCTGTGTGGG +
Preference number: 4 (lower is better)
Translates to: AEHTASTWNGSLVGVTAQEGTAQ*GSFLCG
Trigger: CCCACACAGGAAGCTGCCCCACTGGGCAGTGCCCTC...CTGGGCAGTGACCCCTACTAGGCTCCCATTCCAGGTACTAGCTGTGTGTTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301050.7
ENST00000536187.6
ENST00000540990.5
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR CCA 90 bp TTAATGGGGCATCCCTTCCCTGAGTCTGGTGGGAAGGACCCTGCTAAGGGGATCGAGGGCACTGCCCAGTaGGGCAGCTTCCTGTGTGGG +
Preference number: 4 (lower is better)
Translates to: LMGHPFPESGGKDPAKGIEGTAQ*GSFLCG
Trigger: CCCACACAGGAAGCTGCCCCACTGGGCAGTGCCCTC...GATCCCCTTAGCAGGGTCCTTCCCACCAGACTCAGGGAAGGGATGCCCCATTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR CCA 90 bp GCCCCGAGGTGTGTTGGCGGTGAGGCTGGTACAGGTCCTGGTAGGCATCTGCATGGTGACTGGAGGCCCTaGATGCCAAAGCAGTCCCTT +
Preference number: 4 (lower is better)
Translates to: APRCVGGEAGTGPGRHLHGDWRP*MPKQSL
Trigger: AAGGGACTGCTTTGGCATCCAGGGCCTCCAGTCACC...ATGCAGATGCCTACCAGGACCTGTACCAGCCTCACCGCCAACACACCTCGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551544.5
CDS-3UTR CCA 90 bp TTGTTGAGCACAGATCGCTTTGCCAGGGAGAGGTCGGCTGTGACTCGGGTGATGCTGAACCCTCCATCCTaGTCTCGAGGGGCGCCCCAG +
Preference number: 4 (lower is better)
Translates to: LLSTDRFARERSAVTRVMLNPPS*SRGAPQ
Trigger: CTGGGGCGCCCCTCGAGACCAGGATGGAGGGTTCAG...CATCACCCGAGTCACAGCCGACCTCTCCCTGGCAAAGCGATCTGTGCTCAACAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550391.5
CDS-3UTR CCA 90 bp CCAATGCTGGAGCGGGCAGAGGAGCGCTCAATGATGGTCCTCTTGCCCGGATTGCATCGAAGCCAATGCTaGAGCGGGCAGAGGAGCGCT +
Preference number: 4 (lower is better)
Translates to: PMLERAEERSMMVLLPGLHRSQC*SGQRSA
Trigger: AGCGCTCCTCTGCCCGCTCCAGCATTGGCTTCGATG...CAATCCGGGCAAGAGGACCATCATTGAGCGCTCCTCTGCCCGCTCCAGCATTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550483.5
CDS-3UTR CCA 90 bp GGTCCTCACCGCAAATGCCACAGGTTTGTGCTTGGCCCTTTCGAGCTGCTGCTGCCAGGCCCTCCATGCTaGGCAAGAGCTCAGGATGCC +
Preference number: 4 (lower is better)
Translates to: GPHRKCHRFVLGPFELLLPGPPC*ARAQDA
Trigger: GGCATCCTGAGCTCTTGCCCAGCATGGAGGGCCTGG...CAGCAGCAGCTCGAAAGGGCCAAGCACAAACCTGTGGCATTTGCGGTGAGGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551544.5
3UTR CAA 72 bp CCCAAACCCCCATCCAGGTTGGCTCCCATCTGCCACTaGGCTTCACCATGCTCCTGGTCCCTGGTCCTGTCA +
Preference number: 4 (lower is better)
Translates to: PKPPSRLAPICH*ASPCSWSLVLS
Trigger: TGACAGGACCAGGGACCAGGAGCATGGTGAAGCCAAGTGGCAGATGGGAGCCAACCTGGATGGGGGTTTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR TCA 90 bp GCAGAACACACAGCTAGTACCTGGAATGGGAGCCTAGTAGGGGTCACTGCCCAGCTCCAGGGAGACGTCTaGGTCCAGAGATGGGCGGCT +
Preference number: 4 (lower is better)
Translates to: AEHTASTWNGSLVGVTAQLQGDV*VQRWAA
Trigger: AGCCGCCCATCTCTGGACTCAGACGTCTCCCTGGAG...CTGGGCAGTGACCCCTACTAGGCTCCCATTCCAGGTACTAGCTGTGTGTTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301050.7
ENST00000536187.6
ENST00000540990.5
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR TCA 90 bp GGTGCAGAACACACAGCTAGTACCTGGAATGGGAGCCTAGTAGGGGTCACTGCCCTCCAGGGAGACGTCTaGGTCCAGAGATGGGCGGCT +
Preference number: 4 (lower is better)
Translates to: GAEHTASTWNGSLVGVTALQGDV*VQRWAA
Trigger: AGCCGCCCATCTCTGGACTCAGACGTCTCCCTGGAG...GGCAGTGACCCCTACTAGGCTCCCATTCCAGGTACTAGCTGTGTGTTCTGCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301050.7
ENST00000536187.6
ENST00000540990.5
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR TCA 90 bp GTTGAGCACAGATCGCTTTGCCAGGGAGAGGTCGGCTGTGACTCGGGTGATGGACCTTCTGCTCCTGTTTaGGCCGGATGCTCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: VEHRSLCQGEVGCDSGDGPSAPV*AGCSPG
Trigger: GCCTGGAGAGCATCCGGCTCAAACAGGAGCAGAAGG...TCCATCACCCGAGTCACAGCCGACCTCTCCCTGGCAAAGCGATCTGTGCTCAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000550391.5
ENST00000550483.5
ENST00000551544.5
CDS-3UTR TCA 90 bp TTCCCCAAACCCCCATCCAGGTTGGCTCCCATCTGCCACTTGGCTTCACCATGCCCTTCTGCTCCTGTTTaGGCCGGATGCTCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: FPKPPSRLAPICHLASPCPSAPV*AGCSPG
Trigger: GCCTGGAGAGCATCCGGCTCAAACAGGAGCAGAAGG...GCATGGTGAAGCCAAGTGGCAGATGGGAGCCAACCTGGATGGGGGTTTGGGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR TCA 90 bp CCAGGAGGTGAGGGGGTCCCCTGTTTCTCCCAGAACCTTGGGACCACAGGCAGCTCTTGCCCGGATTGTTaGGCACAGATCGCTTTGCCA +
Preference number: 4 (lower is better)
Translates to: PGGEGVPCFSQNLGTTGSSCPDC*AQIALP
Trigger: TGGCAAAGCGATCTGTGCTCAACAATCCGGGCAAGA...GCTGCCTGTGGTCCCAAGGTTCTGGGAGAAACAGGGGACCCCCTCACCTCCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000301050.7
ENST00000536187.6
ENST00000540990.5
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR TCA 90 bp CCAATGCTGGAGCGGGCAGAGGAGCGCTCAATGATGGTCCTCTTGCCCGGATTGCAGAGGAGCGCTCAATaGTGGTCCTCTTGCCCGGAT +
Preference number: 4 (lower is better)
Translates to: PMLERAEERSMMVLLPGLQRSAQ*WSSCPD
Trigger: ATCCGGGCAAGAGGACCATCATTGAGCGCTCCTCTG...CAATCCGGGCAAGAGGACCATCATTGAGCGCTCCTCTGCCCGCTCCAGCATTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550483.5
CDS-3UTR TCA 90 bp CTGCTCCAGTCTTGGATGTGGCTGCCACACCCCAGCAAACAGATGGGTGTGCCAAGCAGCTGCTGGTTCTaGAGTCCGGGGATGGCACTG +
Preference number: 4 (lower is better)
Translates to: LLQSWMWLPHPSKQMGVPSSCWF*SPGMAL
Trigger: CAGTGCCATCCCCGGACTTCAGAACCAGCAGCTGCT...TGGCACACCCATCTGTTTGCTGGGGTGTGGCAGCCACATCCAAGACTGGAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR TCA 90 bp GGTGCAGAACACACAGCTAGTACCTGGAATGGGAGCCTAGTAGGGGTCACTGCCGAGGTGTGTTGGCGGTaGGGCTGGTACAGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: GAEHTASTWNGSLVGVTAEVCWR*GWYRSW
Trigger: CCAGGACCTGTACCAGCCTCACCGCCAACACACCTC...GGCAGTGACCCCTACTAGGCTCCCATTCCAGGTACTAGCTGTGTGTTCTGCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301050.7
ENST00000536187.6
ENST00000540990.5
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR TCA 90 bp GCAGAACACACAGCTAGTACCTGGAATGGGAGCCTAGTAGGGGTCACTGCCCAGGAGGTGTGTTGGCGGTaGGGCTGGTACAGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: AEHTASTWNGSLVGVTAQEVCWR*GWYRSW
Trigger: CCAGGACCTGTACCAGCCTCACCGCCAACACACCTC...CTGGGCAGTGACCCCTACTAGGCTCCCATTCCAGGTACTAGCTGTGTGTTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301050.7
ENST00000536187.6
ENST00000540990.5
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR TCA 90 bp TTAATGGGGCATCCCTTCCCTGAGTCTGGTGGGAAGGACCCTGCTAAGGGGATCGAGGTGTGTTGGCGGTaGGGCTGGTACAGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: LMGHPFPESGGKDPAKGIEVCWR*GWYRSW
Trigger: CCAGGACCTGTACCAGCCTCACCGCCAACACACCTC...GATCCCCTTAGCAGGGTCCTTCCCACCAGACTCAGGGAAGGGATGCCCCATTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR TCA 90 bp ACTGGAGGCCCTGGATGCCAAAGCAGTCCCTTGACTGTCAGGACTTGTGCCTGCAGCCTAGTGCCAGCCTaGTGCCAGTCTAACGCCACC +
Preference number: 4 (lower is better)
Translates to: TGGPGCQSSPLTVRTCACSLVPA*CQSNAT
Trigger: GGTGGCGTTAGACTGGCATCAGGCTGGCACTAGGCT...GCAGGCACAAGTCCTGACAGTCAAGGGACTGCTTTGGCATCCAGGGCCTCCAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR TCA 90 bp CATAAGGCAAGAGTAGCCGGGGAGACAGGTCCTCTGTGCCCTGTCTCTCCCCATTGTATGGCAGTGAGGTaGCTGGAGGCCCTGGATGCC +
Preference number: 4 (lower is better)
Translates to: HKARVAGETGPLCPVSPHCMAVR*LEALDA
Trigger: GGCATCCAGGGCCTCCAGTCACCTCACTGCCATACA...ATGGGGAGAGACAGGGCACAGAGGACCTGTCTCCCCGGCTACTCTTGCCTTATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR TCA 90 bp ACTGGAGGCCCTGGATGCCAAAGCAGTCCCTTGACTGTCAGGACTTGTGCCTGCTGTATGGCAGTGAGGTaGCTGGAGGCCCTGGATGCC +
Preference number: 4 (lower is better)
Translates to: TGGPGCQSSPLTVRTCACCMAVR*LEALDA
Trigger: GGCATCCAGGGCCTCCAGTCACCTCACTGCCATACA...GCAGGCACAAGTCCTGACAGTCAAGGGACTGCTTTGGCATCCAGGGCCTCCAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR TCA 90 bp TGGGGCATCCCTTCCCTGAGTCTGGTGGGAAGGACCCTGCTAAGGGGATCCTGGTCTAATGTATGGCAGTaGGGTGACTGGAGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: WGIPSLSLVGRTLLRGSWSNVWQ*GDWRPW
Trigger: CCAGGGCCTCCAGTCACCTCACTGCCATACATTAGA...CCAGGATCCCCTTAGCAGGGTCCTTCCCACCAGACTCAGGGAAGGGATGCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR TCA 90 bp GCCCTCCTTCCCCAAACCCCCATCCAGGTTGGCTCCCATCTGCCACTTGGCTTCTGCAGGGCAAAAGAATaGGAAAGGCAAGGAGGCCCC +
Preference number: 4 (lower is better)
Translates to: ALLPQTPIQVGSHLPLGFCRAKE*ERQGGP
Trigger: GGGGCCTCCTTGCCTTTCTCATTCTTTTGCCCTGCA...GAAGCCAAGTGGCAGATGGGAGCCAACCTGGATGGGGGTTTGGGGAAGGAGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR GCA 90 bp CATAAGGCAAGAGTAGCCGGGGAGACAGGTCCTCTGTGCCCTGTCTCTCCCCATGAGGGGAGCGTCGGTTaGCAATGTCACTCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: HKARVAGETGPLCPVSPHEGSVG*QCHSGW
Trigger: CCAGCCTGAGTGACATTGGCAACCGACGCTCCCCTC...ATGGGGAGAGACAGGGCACAGAGGACCTGTCTCCCCGGCTACTCTTGCCTTATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR GCA 90 bp CCAGGAGGTGAGGGGGTCCCCTGTTTCTCCCAGAACCTTGGGACCACAGGCAGCGCCTGCTTTTGCTTCTaGTTGGCTAGAGATGGCGGA +
Preference number: 4 (lower is better)
Translates to: PGGEGVPCFSQNLGTTGSACFCF*LARDGG
Trigger: TCCGCCATCTCTAGCCAAGCAGAAGCAAAAGCAGGC...GCTGCCTGTGGTCCCAAGGTTCTGGGAGAAACAGGGGACCCCCTCACCTCCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000301050.7
ENST00000536187.6
ENST00000540990.5
ENST00000547230.5
ENST00000551544.5
CDS-3UTR GCA 90 bp CTGAGTCTGGTGGGAAGGACCCTGCTAAGGGGATCCTGGCCTGAGGGCACTGCCGCCTGCTTTTGCTTCTaGTTGGCTAGAGATGGCGGA +
Preference number: 4 (lower is better)
Translates to: LSLVGRTLLRGSWPEGTAACFCF*LARDGG
Trigger: TCCGCCATCTCTAGCCAAGCAGAAGCAAAAGCAGGC...GGCAGTGCCCTCAGGCCAGGATCCCCTTAGCAGGGTCCTTCCCACCAGACTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR GCA 90 bp CTGCTCCAGTCTTGGATGTGGCTGCCACACCCCAGCAAACAGATGGGTGTGCCATCTGCACTTCCGCAATaGTGGAGCGGGCAGAGGAGC +
Preference number: 4 (lower is better)
Translates to: LLQSWMWLPHPSKQMGVPSALPQ*WSGQRS
Trigger: GCTCCTCTGCCCGCTCCAGCATTGCGGAAGTGCAGA...TGGCACACCCATCTGTTTGCTGGGGTGTGGCAGCCACATCCAAGACTGGAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR GCA 90 bp ACTGGAGGCCCTGGATGCCAAAGCAGTCCCTTGACTGTCAGGACTTGTGCCTGCTCTGCACTTCCGCAATaGTGGAGCGGGCAGAGGAGC +
Preference number: 4 (lower is better)
Translates to: TGGPGCQSSPLTVRTCACSALPQ*WSGQRS
Trigger: GCTCCTCTGCCCGCTCCAGCATTGCGGAAGTGCAGA...GCAGGCACAAGTCCTGACAGTCAAGGGACTGCTTTGGCATCCAGGGCCTCCAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR GCA 90 bp TTCCCCAAACCCCCATCCAGGTTGGCTCCCATCTGCCACTTGGCTTCACCATGCCGGTCTTGGGGGTCATaGCCGTTAGCACTAGGCAGC +
Preference number: 4 (lower is better)
Translates to: FPKPPSRLAPICHLASPCRSWGS*PLALGS
Trigger: GCTGCCTAGTGCTAACGGGCATGACCCCCAAGACCG...GCATGGTGAAGCCAAGTGGCAGATGGGAGCCAACCTGGATGGGGGTTTGGGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR GCA 90 bp GCAGAACACACAGCTAGTACCTGGAATGGGAGCCTAGTAGGGGTCACTGCCCAGCAAGGCCGGTTGCGCTaGCAGTTCCGGTCACTGTGG +
Preference number: 4 (lower is better)
Translates to: AEHTASTWNGSLVGVTAQQGRLR*QFRSLW
Trigger: CCACAGTGACCGGAACTGGCAGCGCAACCGGCCTTG...CTGGGCAGTGACCCCTACTAGGCTCCCATTCCAGGTACTAGCTGTGTGTTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301050.7
ENST00000536187.6
ENST00000540990.5
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR GCA 90 bp GCAGAACACACAGCTAGTACCTGGAATGGGAGCCTAGTAGGGGTCACTGCCCAGCCTAGTAGGGGTCACTaGCCAGGAGGTGAGGGGGTC +
Preference number: 4 (lower is better)
Translates to: AEHTASTWNGSLVGVTAQPSRGH*PGGEGV
Trigger: GACCCCCTCACCTCCTGGGCAGTGACCCCTACTAGG...CTGGGCAGTGACCCCTACTAGGCTCCCATTCCAGGTACTAGCTGTGTGTTCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000301050.7
ENST00000536187.6
ENST00000540990.5
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR GCA 90 bp TGGGGCATCCCTTCCCTGAGTCTGGTGGGAAGGACCCTGCTAAGGGGATCCTGGTTCCTCATGCCATGGTaGCCACACCCCACCCTTTTG +
Preference number: 4 (lower is better)
Translates to: WGIPSLSLVGRTLLRGSWFLMPW*PHPTLL
Trigger: CAAAAGGGTGGGGTGTGGGCACCATGGCATGAGGAA...CCAGGATCCCCTTAGCAGGGTCCTTCCCACCAGACTCAGGGAAGGGATGCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR GCA 90 bp CCCGTTAGCACTAGGCAGCCCCGAGGTGTGTTGGCGGTGAGGCTGGTACAGGTCGACTGTCAGGACTTGTaGCTGCTCAGGGACCTTGTT +
Preference number: 4 (lower is better)
Translates to: PVSTRQPRGVLAVRLVQVDCQDL*LLRDLV
Trigger: AACAAGGTCCCTGAGCAGGCACAAGTCCTGACAGTC...GACCTGTACCAGCCTCACCGCCAACACACCTCGGGGCTGCCTAGTGCTAACGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551544.5
CDS-3UTR GCA 90 bp AGCCATAAGGCAAGAGTAGCCGGGGAGACAGGTCCTCTGTGCCCTGTCTCTCCCCACTTGGCTTCACCATaGTCCTGGTCCCTGGTCCTG +
Preference number: 4 (lower is better)
Translates to: SHKARVAGETGPLCPVSPHLASP*SWSLVL
Trigger: CAGGACCAGGGACCAGGAGCATGGTGAAGCCAAGTG...GGGAGAGACAGGGCACAGAGGACCTGTCTCCCCGGCTACTCTTGCCTTATGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR GCA 90 bp GCCCTCCTTCCCCAAACCCCCATCCAGGTTGGCTCCCATCTGCCACTTGGCTTCGAGACAGGTCCTCTGTaGCCTGTCTCTCCCCATCTA +
Preference number: 4 (lower is better)
Translates to: ALLPQTPIQVGSHLPLGFETGPL*PVSPHL
Trigger: TAGATGGGGAGAGACAGGGCACAGAGGACCTGTCTC...GAAGCCAAGTGGCAGATGGGAGCCAACCTGGATGGGGGTTTGGGGAAGGAGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR GCA 90 bp TACCTGGAATGGGAGCCTAGTAGGGGTCACTGCCCAGGAGGTGAGGGGGTCCCCGGGGCTTGTGGAGCATaGTCTGTAGGTCACACACTA +
Preference number: 4 (lower is better)
Translates to: YLEWEPSRGHCPGGEGVPGACGA*SVGHTL
Trigger: TAGTGTGTGACCTACAGAGCATGCTCCACAAGCCCC...GGGGACCCCCTCACCTCCTGGGCAGTGACCCCTACTAGGCTCCCATTCCAGGTA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR GCA 90 bp CCCCAAACCCCCATCCAGGTTGGCTCCCATCTGCCACTTGGCTTCACCATGCTCTCCAGGCACTCTCCCTaGTGTCTGAGCTCCGGGAAT +
Preference number: 4 (lower is better)
Translates to: PQTPIQVGSHLPLGFTMLSRHSP*CLSSGN
Trigger: ATTCCCGGAGCTCAGACAGCAGGGAGAGTGCCTGGA...GAGCATGGTGAAGCCAAGTGGCAGATGGGAGCCAACCTGGATGGGGGTTTGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000551544.5
CDS-3UTR CCA 90 bp TTAATGGGGCATCCCTTCCCTGAGTCTGGTGGGAAGGACCCTGCTAAGGGGATCGTGCTAGGTGGAAGGTaGGTCCCCGAGCACCTACGG +
Preference number: 4 (lower is better)
Translates to: LMGHPFPESGGKDPAKGIVLGGR*VPEHLR
Trigger: CCGTAGGTGCTCGGGGACCCACCTTCCACCTAGCAC...GATCCCCTTAGCAGGGTCCTTCCCACCAGACTCAGGGAAGGGATGCCCCATTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301050.7
ENST00000547392.5
CDS-3UTR CCA 90 bp GCAGAACACACAGCTAGTACCTGGAATGGGAGCCTAGTAGGGGTCACTGCCCAGCGAACCCGTGCTAGGTaGAAGGTGGGTCCCCGAGCA +
Preference number: 4 (lower is better)
Translates to: AEHTASTWNGSLVGVTAQRTRAR*KVGPRA
Trigger: TGCTCGGGGACCCACCTTCCACCTAGCACGGGTTCG...CTGGGCAGTGACCCCTACTAGGCTCCCATTCCAGGTACTAGCTGTGTGTTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301050.7
ENST00000547392.5
CDS-3UTR CCA 90 bp CATATGGGGGAACATGTTCCGCCTAGAGATGGCGGAGGGGAGCGTCGGTTGCCATCCAGAGCCCTGGACTaGGCACTCCTCATCCAGTAC +
Preference number: 4 (lower is better)
Translates to: HMGEHVPPRDGGGERRLPSRALD*ALLIQY
Trigger: GTACTGGATGAGGAGTGCCCAGTCCAGGGCTCTGGA...TGGCAACCGACGCTCCCCTCCGCCATCTCTAGGCGGAACATGTTCCCCCATATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000548874.5
CDS-3UTR CCA 90 bp CATATGGGGGAACATGTTCCGCCTAGAGATGGCGGAGGGGAGCGTCGGTTGCCATTGACTCCAGAGCCCTaGACTGGGCACTCCTCATCC +
Preference number: 4 (lower is better)
Translates to: HMGEHVPPRDGGGERRLPLTPEP*TGHSSS
Trigger: GGATGAGGAGTGCCCAGTCCAGGGCTCTGGAGTCAA...TGGCAACCGACGCTCCCCTCCGCCATCTCTAGGCGGAACATGTTCCCCCATATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000548874.5
CDS-3UTR CCA 90 bp GTTGAGCACAGATCGCTTTGCCAGGGAGAGGTCGGCTGTGACTCGGGTGATGGAGCACCACAGGCCGCATaGAGGGCACCACGTCATATG +
Preference number: 4 (lower is better)
Translates to: VEHRSLCQGEVGCDSGDGAPQAA*RAPRHM
Trigger: CATATGACGTGGTGCCCTCCATGCGGCCTGTGGTGC...TCCATCACCCGAGTCACAGCCGACCTCTCCCTGGCAAAGCGATCTGTGCTCAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000550391.5
ENST00000550483.5
ENST00000551544.5
CDS-3UTR CCA 90 bp GCAGAACACACAGCTAGTACCTGGAATGGGAGCCTAGTAGGGGTCACTGCCCAGGCACTTCCGCAATGCTaGAGCGGGCAGAGGAGCGCT +
Preference number: 4 (lower is better)
Translates to: AEHTASTWNGSLVGVTAQALPQC*SGQRSA
Trigger: AGCGCTCCTCTGCCCGCTCCAGCATTGCGGAAGTGC...CTGGGCAGTGACCCCTACTAGGCTCCCATTCCAGGTACTAGCTGTGTGTTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301050.7
ENST00000536187.6
ENST00000540990.5
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR CCA 90 bp TCCAGAGCCCTGGACTGGGCACTCCTCATCCAGTACGCCACAGTAGCTGACATTGCACTTCCGCAATGCTaGAGCGGGCAGAGGAGCGCT +
Preference number: 4 (lower is better)
Translates to: SRALDWALLIQYATVADIALPQC*SGQRSA
Trigger: AGCGCTCCTCTGCCCGCTCCAGCATTGCGGAAGTGC...AATGTCAGCTACTGTGGCGTACTGGATGAGGAGTGCCCAGTCCAGGGCTCTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551544.5
CDS-3UTR CCA 90 bp TACCTGGAATGGGAGCCTAGTAGGGGTCACTGCCCAGGAGGTGAGGGGGTCCCCGAGCGAATGAGACGCTaGAGTACCTTTGGTGAGGAC +
Preference number: 4 (lower is better)
Translates to: YLEWEPSRGHCPGGEGVPERMRR*STFGED
Trigger: GTCCTCACCAAAGGTACTCCAGCGTCTCATTCGCTC...GGGGACCCCCTCACCTCCTGGGCAGTGACCCCTACTAGGCTCCCATTCCAGGTA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000301050.7
ENST00000536187.6
ENST00000540990.5
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR CCA 90 bp GCAGAACACACAGCTAGTACCTGGAATGGGAGCCTAGTAGGGGTCACTGCCCAGGGCGGGAGCTCTCGCTaGCCTCATCAGAGGGCATCA +
Preference number: 4 (lower is better)
Translates to: AEHTASTWNGSLVGVTAQGGSSR*PHQRAS
Trigger: TGATGCCCTCTGATGAGGCCAGCGAGAGCTCCCGCC...CTGGGCAGTGACCCCTACTAGGCTCCCATTCCAGGTACTAGCTGTGTGTTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301050.7
ENST00000536187.6
ENST00000540990.5
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR CCA 90 bp CAGCAGCTGCTGGTTCTGAAGTCCGGGGATGGCACTGGGAGGACCCAGAAGTCCCAGTTCCGGTCACTGTaGTTGTGCTCTGAGTCCTGG +
Preference number: 4 (lower is better)
Translates to: QQLLVLKSGDGTGRTQKSQFRSL*LCSESW
Trigger: CCAGGACTCAGAGCACAACCACAGTGACCGGAACTG...GGACTTCTGGGTCCTCCCAGTGCCATCCCCGGACTTCAGAACCAGCAGCTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551544.5
CDS-3UTR CCA 90 bp ACTGGAGGCCCTGGATGCCAAAGCAGTCCCTTGACTGTCAGGACTTGTGCCTGCGGGCAGCTTCCTGTGTaGGAGGAGAGGAAGGTGCCA +
Preference number: 4 (lower is better)
Translates to: TGGPGCQSSPLTVRTCACGQLPV*EERKVP
Trigger: TGGCACCTTCCTCTCCTCCCACACAGGAAGCTGCCC...GCAGGCACAAGTCCTGACAGTCAAGGGACTGCTTTGGCATCCAGGGCCTCCAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR CCA 90 bp GGTCCTCACCGCAAATGCCACAGGTTTGTGCTTGGCCCTTTCGAGCTGCTGCTGGGGCAGCTTCCTGTGTaGGAGGAGAGGAAGGTGCCA +
Preference number: 4 (lower is better)
Translates to: GPHRKCHRFVLGPFELLLGQLPV*EERKVP
Trigger: TGGCACCTTCCTCTCCTCCCACACAGGAAGCTGCCC...CAGCAGCAGCTCGAAAGGGCCAAGCACAAACCTGTGGCATTTGCGGTGAGGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551544.5
CDS-3UTR CCA 90 bp GTCACTTTAATGGGGCATCCCTTCCCTGAGTCTGGTGGGAAGGACCCTGCTAAGGAGGGCACTGCCCAGTaGGGCAGCTTCCTGTGTGGG +
Preference number: 4 (lower is better)
Translates to: VTLMGHPFPESGGKDPAKEGTAQ*GSFLCG
Trigger: CCCACACAGGAAGCTGCCCCACTGGGCAGTGCCCTC...CTTAGCAGGGTCCTTCCCACCAGACTCAGGGAAGGGATGCCCCATTAAAGTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR CCA 90 bp CAAACCCCCATCCAGGTTGGCTCCCATCTGCCACTTGGCTTCACCATGCTCCTGCTGCTGCTCCAGTCTTaGATGTGGCTGCCACACCCC +
Preference number: 4 (lower is better)
Translates to: QTPIQVGSHLPLGFTMLLLLLQS*MWLPHP
Trigger: GGGGTGTGGCAGCCACATCCAAGACTGGAGCAGCAG...CAGGAGCATGGTGAAGCCAAGTGGCAGATGGGAGCCAACCTGGATGGGGGTTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR CCA 90 bp TTCCCCAAACCCCCATCCAGGTTGGCTCCCATCTGCCACTTGGCTTCACCATGCCTGCTGCTCCAGTCTTaGATGTGGCTGCCACACCCC +
Preference number: 4 (lower is better)
Translates to: FPKPPSRLAPICHLASPCLLLQS*MWLPHP
Trigger: GGGGTGTGGCAGCCACATCCAAGACTGGAGCAGCAG...GCATGGTGAAGCCAAGTGGCAGATGGGAGCCAACCTGGATGGGGGTTTGGGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR CCA 90 bp GGAGCGGGCAGAGGAGCGCTCAATGATGGTCCTCTTGCCCGGATTGTTGAGCACTCTGCACTTCCGCTATaGAGGGAGGCAGCAGCAGTG +
Preference number: 4 (lower is better)
Translates to: GAGRGALNDGPLARIVEHSALPL*REAAAV
Trigger: CACTGCTGCTGCCTCCCTCCATAGCGGAAGTGCAGA...GTGCTCAACAATCCGGGCAAGAGGACCATCATTGAGCGCTCCTCTGCCCGCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550483.5
3UTR CAA 72 bp GAGGTGACTGGAGGCCCTGGATGCCAAAGCAGTCCCTaGACTGTCAGGACTTGTGCCTGCTCAGGGACCTTG +
Preference number: 4 (lower is better)
Translates to: EVTGGPGCQSSP*TVRTCACSGTL
Trigger: CAAGGTCCCTGAGCAGGCACAAGTCCTGACAGTCAAGGGACTGCTTTGGCATCCAGGGCCTCCAGTCACCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR TCA 90 bp CATATGGGGGAACATGTTCCGCCTAGAGATGGCGGAGGGGAGCGTCGGTTGCCACTTTCGAGCTGCTGCTaGGCCTGGCTCTCTACTTCA +
Preference number: 4 (lower is better)
Translates to: HMGEHVPPRDGGGERRLPLSSCC*AWLSTS
Trigger: TGAAGTAGAGAGCCAGGCTCAGCAGCAGCTCGAAAG...TGGCAACCGACGCTCCCCTCCGCCATCTCTAGGCGGAACATGTTCCCCCATATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000548874.5
CDS-3UTR TCA 90 bp CCCCAAACCCCCATCCAGGTTGGCTCCCATCTGCCACTTGGCTTCACCATGCTCCTTTCGAGCTGCTGCTaGGCCTGGCTCTCTACTTCA +
Preference number: 4 (lower is better)
Translates to: PQTPIQVGSHLPLGFTMLLSSCC*AWLSTS
Trigger: TGAAGTAGAGAGCCAGGCTCAGCAGCAGCTCGAAAG...GAGCATGGTGAAGCCAAGTGGCAGATGGGAGCCAACCTGGATGGGGGTTTGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR TCA 90 bp CATATGGGGGAACATGTTCCGCCTAGAGATGGCGGAGGGGAGCGTCGGTTGCCAGTACGCCACAGTAGCTaGCATTGGTCCTCACCGCAA +
Preference number: 4 (lower is better)
Translates to: HMGEHVPPRDGGGERRLPVRHSS*HWSSPQ
Trigger: TTGCGGTGAGGACCAATGTCAGCTACTGTGGCGTAC...TGGCAACCGACGCTCCCCTCCGCCATCTCTAGGCGGAACATGTTCCCCCATATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000548874.5
CDS-3UTR TCA 90 bp CATATGGGGGAACATGTTCCGCCTAGAGATGGCGGAGGGGAGCGTCGGTTGCCACTTTGGCCTCAAAGTTaGCTCCAGAGCCCTGGACTG +
Preference number: 4 (lower is better)
Translates to: HMGEHVPPRDGGGERRLPLWPQS*LQSPGL
Trigger: CAGTCCAGGGCTCTGGAGTCAACTTTGAGGCCAAAG...TGGCAACCGACGCTCCCCTCCGCCATCTCTAGGCGGAACATGTTCCCCCATATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000548874.5
CDS-3UTR TCA 90 bp GGTGCAGAACACACAGCTAGTACCTGGAATGGGAGCCTAGTAGGGGTCACTGCCCCTTCTGCTCCTGTTTaGGCCGGATGCTCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: GAEHTASTWNGSLVGVTAPSAPV*AGCSPG
Trigger: GCCTGGAGAGCATCCGGCTCAAACAGGAGCAGAAGG...GGCAGTGACCCCTACTAGGCTCCCATTCCAGGTACTAGCTGTGTGTTCTGCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000301050.7
ENST00000536187.6
ENST00000540990.5
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR TCA 90 bp TGGGGCATCCCTTCCCTGAGTCTGGTGGGAAGGACCCTGCTAAGGGGATCCTGGTCTTGCCCGGATTGTTaGGCACAGATCGCTTTGCCA +
Preference number: 4 (lower is better)
Translates to: WGIPSLSLVGRTLLRGSWSCPDC*AQIALP
Trigger: TGGCAAAGCGATCTGTGCTCAACAATCCGGGCAAGA...CCAGGATCCCCTTAGCAGGGTCCTTCCCACCAGACTCAGGGAAGGGATGCCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR TCA 90 bp GGTCCTCACCGCAAATGCCACAGGTTTGTGCTTGGCCCTTTCGAGCTGCTGCTGCAGAGGAGCGCTCAATaGTGGTCCTCTTGCCCGGAT +
Preference number: 4 (lower is better)
Translates to: GPHRKCHRFVLGPFELLLQRSAQ*WSSCPD
Trigger: ATCCGGGCAAGAGGACCATCATTGAGCGCTCCTCTG...CAGCAGCAGCTCGAAAGGGCCAAGCACAAACCTGTGGCATTTGCGGTGAGGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551544.5
CDS-3UTR TCA 90 bp TTCCCCAAACCCCCATCCAGGTTGGCTCCCATCTGCCACTTGGCTTCACCATGCGCTGTGCTGGGTGGTTaGTGGTGTCAGCGTCCAACA +
Preference number: 4 (lower is better)
Translates to: FPKPPSRLAPICHLASPCAVLGG*WCQRPT
Trigger: TGTTGGACGCTGACACCATCAACCACCCAGCACAGC...GCATGGTGAAGCCAAGTGGCAGATGGGAGCCAACCTGGATGGGGGTTTGGGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR TCA 90 bp AGGCCCTGGATGCCAAAGCAGTCCCTTGACTGTCAGGACTTGTGCCTGCTCAGGGCTGTGCTGGGTGGTTaGTGGTGTCAGCGTCCAACA +
Preference number: 4 (lower is better)
Translates to: RPWMPKQSLDCQDLCLLRAVLGG*WCQRPT
Trigger: TGTTGGACGCTGACACCATCAACCACCCAGCACAGC...CCTGAGCAGGCACAAGTCCTGACAGTCAAGGGACTGCTTTGGCATCCAGGGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR TCA 90 bp GCAGAACACACAGCTAGTACCTGGAATGGGAGCCTAGTAGGGGTCACTGCCCAGTCCCCCGGGAGCGAATaGGACGCTGGAGTACCTTTG +
Preference number: 4 (lower is better)
Translates to: AEHTASTWNGSLVGVTAQSPGSE*DAGVPL
Trigger: CAAAGGTACTCCAGCGTCTCATTCGCTCCCGGGGGA...CTGGGCAGTGACCCCTACTAGGCTCCCATTCCAGGTACTAGCTGTGTGTTCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000301050.7
ENST00000536187.6
ENST00000540990.5
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR TCA 90 bp GGTGCAGAACACACAGCTAGTACCTGGAATGGGAGCCTAGTAGGGGTCACTGCCTCCCCCGGGAGCGAATaGGACGCTGGAGTACCTTTG +
Preference number: 4 (lower is better)
Translates to: GAEHTASTWNGSLVGVTASPGSE*DAGVPL
Trigger: CAAAGGTACTCCAGCGTCTCATTCGCTCCCGGGGGA...GGCAGTGACCCCTACTAGGCTCCCATTCCAGGTACTAGCTGTGTGTTCTGCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000301050.7
ENST00000536187.6
ENST00000540990.5
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR TCA 90 bp CAAACCCCCATCCAGGTTGGCTCCCATCTGCCACTTGGCTTCACCATGCTCCTGCAGGTGCTTCATCTGTaGCTTCCCCCGGGAGCGAAT +
Preference number: 4 (lower is better)
Translates to: QTPIQVGSHLPLGFTMLLQVLHL*LPPGAN
Trigger: ATTCGCTCCCGGGGGAAGTCACAGATGAAGCACCTG...CAGGAGCATGGTGAAGCCAAGTGGCAGATGGGAGCCAACCTGGATGGGGGTTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR TCA 90 bp GGTGCAGAACACACAGCTAGTACCTGGAATGGGAGCCTAGTAGGGGTCACTGCCAGCAGCTGCTGGTTCTaGAGTCCGGGGATGGCACTG +
Preference number: 4 (lower is better)
Translates to: GAEHTASTWNGSLVGVTASSCWF*SPGMAL
Trigger: CAGTGCCATCCCCGGACTTCAGAACCAGCAGCTGCT...GGCAGTGACCCCTACTAGGCTCCCATTCCAGGTACTAGCTGTGTGTTCTGCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000301050.7
ENST00000536187.6
ENST00000540990.5
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR TCA 90 bp TTAATGGGGCATCCCTTCCCTGAGTCTGGTGGGAAGGACCCTGCTAAGGGGATCGCGGGAGCTACGCTGTaGAGATCCTGTCCAGGCTTG +
Preference number: 4 (lower is better)
Translates to: LMGHPFPESGGKDPAKGIAGATL*RSCPGL
Trigger: CAAGCCTGGACAGGATCTTCACAGCGTAGCTCCCGC...GATCCCCTTAGCAGGGTCCTTCCCACCAGACTCAGGGAAGGGATGCCCCATTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR TCA 90 bp GGTGCAGAACACACAGCTAGTACCTGGAATGGGAGCCTAGTAGGGGTCACTGCCGCGGGAGCTACGCTGTaGAGATCCTGTCCAGGCTTG +
Preference number: 4 (lower is better)
Translates to: GAEHTASTWNGSLVGVTAAGATL*RSCPGL
Trigger: CAAGCCTGGACAGGATCTTCACAGCGTAGCTCCCGC...GGCAGTGACCCCTACTAGGCTCCCATTCCAGGTACTAGCTGTGTGTTCTGCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301050.7
ENST00000536187.6
ENST00000540990.5
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR TCA 90 bp CCAGGAGGTGAGGGGGTCCCCTGTTTCTCCCAGAACCTTGGGACCACAGGCAGCAACAAGCGGCAGCTATaGGTCAGGGAACAAAGTCTG +
Preference number: 4 (lower is better)
Translates to: PGGEGVPCFSQNLGTTGSNKRQL*VREQSL
Trigger: CAGACTTTGTTCCCTGACTCATAGCTGCCGCTTGTT...GCTGCCTGTGGTCCCAAGGTTCTGGGAGAAACAGGGGACCCCCTCACCTCCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR TCA 90 bp GCCCGGATTGTTGAGCACAGATCGCTTTGCCAGGGAGAGGTCGGCTGTGACTCGGGTTGCCTGTTTCTCTaGGCAAAGCGCTTCCTCTCC +
Preference number: 4 (lower is better)
Translates to: ARIVEHRSLCQGEVGCDSGCLFL*AKRFLS
Trigger: GGAGAGGAAGCGCTTTGCTCAGAGAAACAGGCAACC...CGAGTCACAGCCGACCTCTCCCTGGCAAAGCGATCTGTGCTCAACAATCCGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551544.5
CDS-3UTR GCA 90 bp CCAATGCTGGAGCGGGCAGAGGAGCGCTCAATGATGGTCCTCTTGCCCGGATTGGATCTCCTGGCCTTCTaGTCCTGTTTGAGCCGGATG +
Preference number: 4 (lower is better)
Translates to: PMLERAEERSMMVLLPGLDLLAF*SCLSRM
Trigger: CATCCGGCTCAAACAGGAGCAGAAGGCCAGGAGATC...CAATCCGGGCAAGAGGACCATCATTGAGCGCTCCTCTGCCCGCTCCAGCATTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550483.5
CDS-3UTR GCA 90 bp GGTGCAGAACACACAGCTAGTACCTGGAATGGGAGCCTAGTAGGGGTCACTGCCGAGGGGAGCGTCGGTTaGCAATGTCACTCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: GAEHTASTWNGSLVGVTAEGSVG*QCHSGW
Trigger: CCAGCCTGAGTGACATTGGCAACCGACGCTCCCCTC...GGCAGTGACCCCTACTAGGCTCCCATTCCAGGTACTAGCTGTGTGTTCTGCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000301050.7
ENST00000536187.6
ENST00000540990.5
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR GCA 90 bp TTAATGGGGCATCCCTTCCCTGAGTCTGGTGGGAAGGACCCTGCTAAGGGGATCGAGGGGAGCGTCGGTTaGCAATGTCACTCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: LMGHPFPESGGKDPAKGIEGSVG*QCHSGW
Trigger: CCAGCCTGAGTGACATTGGCAACCGACGCTCCCCTC...GATCCCCTTAGCAGGGTCCTTCCCACCAGACTCAGGGAAGGGATGCCCCATTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR GCA 90 bp GCATTCATCGAAGCCAATGCTGGAGCGGGCAGAGGAGCGCTCAATGATGGTCCTGAGGGGAGCGTCGGTTaGCAATGTCACTCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: AFIEANAGAGRGALNDGPEGSVG*QCHSGW
Trigger: CCAGCCTGAGTGACATTGGCAACCGACGCTCCCCTC...AGGACCATCATTGAGCGCTCCTCTGCCCGCTCCAGCATTGGCTTCGATGAATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550483.5
CDS-3UTR GCA 90 bp TTGTTGAGCACAGATCGCTTTGCCAGGGAGAGGTCGGCTGTGACTCGGGTGATGGAGGGGAGCGTCGGTTaGCAATGTCACTCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: LLSTDRFARERSAVTRVMEGSVG*QCHSGW
Trigger: CCAGCCTGAGTGACATTGGCAACCGACGCTCCCCTC...CATCACCCGAGTCACAGCCGACCTCTCCCTGGCAAAGCGATCTGTGCTCAACAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000550391.5
ENST00000550483.5
ENST00000551544.5
CDS-3UTR GCA 90 bp TACCTGGAATGGGAGCCTAGTAGGGGTCACTGCCCAGGAGGTGAGGGGGTCCCCGGAACATGTTCCGCCTaGTTTTGCTTCTGCTTGGCT +
Preference number: 4 (lower is better)
Translates to: YLEWEPSRGHCPGGEGVPGTCSA*FCFCLA
Trigger: AGCCAAGCAGAAGCAAAAGCAGGCGGAACATGTTCC...GGGGACCCCCTCACCTCCTGGGCAGTGACCCCTACTAGGCTCCCATTCCAGGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000301050.7
ENST00000536187.6
ENST00000540990.5
ENST00000547230.5
ENST00000551544.5
CDS-3UTR GCA 90 bp CATAAGGCAAGAGTAGCCGGGGAGACAGGTCCTCTGTGCCCTGTCTCTCCCCATGAGCACAGATCGCTTTaGCAGGGAGAGGTCGGCTGT +
Preference number: 4 (lower is better)
Translates to: HKARVAGETGPLCPVSPHEHRSL*QGEVGC
Trigger: ACAGCCGACCTCTCCCTGGCAAAGCGATCTGTGCTC...ATGGGGAGAGACAGGGCACAGAGGACCTGTCTCCCCGGCTACTCTTGCCTTATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR GCA 90 bp CCAGGAGGTGAGGGGGTCCCCTGTTTCTCCCAGAACCTTGGGACCACAGGCAGCTGGCCAGCTCAAATATaGGCTCGATCTCACTCTGCA +
Preference number: 4 (lower is better)
Translates to: PGGEGVPCFSQNLGTTGSWPAQI*ARSHSA
Trigger: TGCAGAGTGAGATCGAGCGCATATTTGAGCTGGCCA...GCTGCCTGTGGTCCCAAGGTTCTGGGAGAAACAGGGGACCCCCTCACCTCCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000301050.7
ENST00000536187.6
ENST00000540990.5
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR GCA 90 bp TACCTGGAATGGGAGCCTAGTAGGGGTCACTGCCCAGGAGGTGAGGGGGTCCCCTGGCCAGCTCAAATATaGGCTCGATCTCACTCTGCA +
Preference number: 4 (lower is better)
Translates to: YLEWEPSRGHCPGGEGVPWPAQI*ARSHSA
Trigger: TGCAGAGTGAGATCGAGCGCATATTTGAGCTGGCCA...GGGGACCCCCTCACCTCCTGGGCAGTGACCCCTACTAGGCTCCCATTCCAGGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000301050.7
ENST00000536187.6
ENST00000540990.5
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR GCA 90 bp TACCTGGAATGGGAGCCTAGTAGGGGTCACTGCCCAGGAGGTGAGGGGGTCCCCTCCAACACTACTAGCTaGAGGGATTTGGCCAGCTCA +
Preference number: 4 (lower is better)
Translates to: YLEWEPSRGHCPGGEGVPSNTTS*RDLASS
Trigger: TGAGCTGGCCAAATCCCTGCAGCTAGTAGTGTTGGA...GGGGACCCCCTCACCTCCTGGGCAGTGACCCCTACTAGGCTCCCATTCCAGGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000301050.7
ENST00000536187.6
ENST00000540990.5
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR GCA 90 bp CCAGGAGGTGAGGGGGTCCCCTGTTTCTCCCAGAACCTTGGGACCACAGGCAGCATCTGTACGGTCAGGTaGTTCATCTGTGACTTCCCC +
Preference number: 4 (lower is better)
Translates to: PGGEGVPCFSQNLGTTGSICTVR*FICDFP
Trigger: GGGGAAGTCACAGATGAAGCACCTGACCGTACAGAT...GCTGCCTGTGGTCCCAAGGTTCTGGGAGAAACAGGGGACCCCCTCACCTCCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000301050.7
ENST00000536187.6
ENST00000540990.5
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR GCA 90 bp TACCTGGAATGGGAGCCTAGTAGGGGTCACTGCCCAGGAGGTGAGGGGGTCCCCATCTGTACGGTCAGGTaGTTCATCTGTGACTTCCCC +
Preference number: 4 (lower is better)
Translates to: YLEWEPSRGHCPGGEGVPICTVR*FICDFP
Trigger: GGGGAAGTCACAGATGAAGCACCTGACCGTACAGAT...GGGGACCCCCTCACCTCCTGGGCAGTGACCCCTACTAGGCTCCCATTCCAGGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000301050.7
ENST00000536187.6
ENST00000540990.5
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR GCA 90 bp GTCACTTTAATGGGGCATCCCTTCCCTGAGTCTGGTGGGAAGGACCCTGCTAAGCAAGGCCGGTTGCGCTaGCAGTTCCGGTCACTGTGG +
Preference number: 4 (lower is better)
Translates to: VTLMGHPFPESGGKDPAKQGRLR*QFRSLW
Trigger: CCACAGTGACCGGAACTGGCAGCGCAACCGGCCTTG...CTTAGCAGGGTCCTTCCCACCAGACTCAGGGAAGGGATGCCCCATTAAAGTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR GCA 90 bp GGATGCCAAAGCAGTCCCTTGACTGTCAGGACTTGTGCCTGCTCAGGGACCTTGCGAGCGTGGCCAGCCTaGTGCTCCAGTCTTGGATGT +
Preference number: 4 (lower is better)
Translates to: GCQSSPLTVRTCACSGTLRAWPA*CSSLGC
Trigger: ACATCCAAGACTGGAGCAGCAGGCTGGCCACGCTCG...CAAGGTCCCTGAGCAGGCACAAGTCCTGACAGTCAAGGGACTGCTTTGGCATCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR GCA 90 bp CCCCAAACCCCCATCCAGGTTGGCTCCCATCTGCCACTTGGCTTCACCATGCTCGTTCTCTGCTACACATaGCCTCCTTCCCCAAACCCC +
Preference number: 4 (lower is better)
Translates to: PQTPIQVGSHLPLGFTMLVLCYT*PPSPNP
Trigger: GGGGTTTGGGGAAGGAGGGCATGTGTAGCAGAGAAC...GAGCATGGTGAAGCCAAGTGGCAGATGGGAGCCAACCTGGATGGGGGTTTGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR GCA 90 bp ACATGCCCTCCTTCCCCAAACCCCCATCCAGGTTGGCTCCCATCTGCCACTTGGGTTCTCTGCTACACATaGCCTCCTTCCCCAAACCCC +
Preference number: 4 (lower is better)
Translates to: TCPPSPNPHPGWLPSATWVLCYT*PPSPNP
Trigger: GGGGTTTGGGGAAGGAGGGCATGTGTAGCAGAGAAC...CCAAGTGGCAGATGGGAGCCAACCTGGATGGGGGTTTGGGGAAGGAGGGCATGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR GCA 90 bp CAGCAGCTGCTGGTTCTGAAGTCCGGGGATGGCACTGGGAGGACCCAGAAGTCCGGGGCTTGTGGAGCATaGTCTGTAGGTCACACACTA +
Preference number: 4 (lower is better)
Translates to: QQLLVLKSGDGTGRTQKSGACGA*SVGHTL
Trigger: TAGTGTGTGACCTACAGAGCATGCTCCACAAGCCCC...GGACTTCTGGGTCCTCCCAGTGCCATCCCCGGACTTCAGAACCAGCAGCTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551544.5
CDS-3UTR GCA 90 bp GCCCGGATTGTTGAGCACAGATCGCTTTGCCAGGGAGAGGTCGGCTGTGACTCGATTCATCGAAGCCAATaGTGGAGCGGGCAGAGGAGC +
Preference number: 4 (lower is better)
Translates to: ARIVEHRSLCQGEVGCDSIHRSQ*WSGQRS
Trigger: GCTCCTCTGCCCGCTCCAGCATTGGCTTCGATGAAT...CGAGTCACAGCCGACCTCTCCCTGGCAAAGCGATCTGTGCTCAACAATCCGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550483.5
CDS-3UTR CCA 90 bp CATATGGGGGAACATGTTCCGCCTAGAGATGGCGGAGGGGAGCGTCGGTTGCCACCACAGGTTTGTGCTTaGCCCTTTCGAGCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: HMGEHVPPRDGGGERRLPPQVCA*PFRAAA
Trigger: AGCAGCAGCTCGAAAGGGCCAAGCACAAACCTGTGG...TGGCAACCGACGCTCCCCTCCGCCATCTCTAGGCGGAACATGTTCCCCCATATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000548874.5
CDS-3UTR CCA 90 bp TTCCCCAAACCCCCATCCAGGTTGGCTCCCATCTGCCACTTGGCTTCACCATGCTTGACTCCAGAGCCCTaGACTGGGCACTCCTCATCC +
Preference number: 4 (lower is better)
Translates to: FPKPPSRLAPICHLASPCLTPEP*TGHSSS
Trigger: GGATGAGGAGTGCCCAGTCCAGGGCTCTGGAGTCAA...GCATGGTGAAGCCAAGTGGCAGATGGGAGCCAACCTGGATGGGGGTTTGGGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301050.7
ENST00000551544.5
CDS-3UTR CCA 90 bp CCTTTTGTCACTTTAATGGGGCATCCCTTCCCTGAGTCTGGTGGGAAGGACCCTATGCTCTCCAGGCGCTaGGGGCTGGGGATGAAGGCG +
Preference number: 4 (lower is better)
Translates to: PFVTLMGHPFPESGGKDPMLSRR*GLGMKA
Trigger: CGCCTTCATCCCCAGCCCCCAGCGCCTGGAGAGCAT...AGGGTCCTTCCCACCAGACTCAGGGAAGGGATGCCCCATTAAAGTGACAAAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR CCA 90 bp TGGGGCATCCCTTCCCTGAGTCTGGTGGGAAGGACCCTGCTAAGGGGATCCTGGCAATGTCACTCAGGCTaGAAGGGTTCCCAGATCTCC +
Preference number: 4 (lower is better)
Translates to: WGIPSLSLVGRTLLRGSWQCHSG*KGSQIS
Trigger: GGAGATCTGGGAACCCTTCCAGCCTGAGTGACATTG...CCAGGATCCCCTTAGCAGGGTCCTTCCCACCAGACTCAGGGAAGGGATGCCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR CCA 90 bp GCAGAACACACAGCTAGTACCTGGAATGGGAGCCTAGTAGGGGTCACTGCCCAGGCACCACAGGCCGCATaGAGGGCACCACGTCATATG +
Preference number: 4 (lower is better)
Translates to: AEHTASTWNGSLVGVTAQAPQAA*RAPRHM
Trigger: CATATGACGTGGTGCCCTCCATGCGGCCTGTGGTGC...CTGGGCAGTGACCCCTACTAGGCTCCCATTCCAGGTACTAGCTGTGTGTTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301050.7
ENST00000536187.6
ENST00000540990.5
ENST00000547230.5
ENST00000551544.5
CDS-3UTR CCA 90 bp AGGGCATTCATCGAAGCCAATGCTGGAGCGGGCAGAGGAGCGCTCAATGATGGTGCACCACAGGCCGCATaGAGGGCACCACGTCATATG +
Preference number: 4 (lower is better)
Translates to: RAFIEANAGAGRGALNDGAPQAA*RAPRHM
Trigger: CATATGACGTGGTGCCCTCCATGCGGCCTGTGGTGC...ACCATCATTGAGCGCTCCTCTGCCCGCTCCAGCATTGGCTTCGATGAATGCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550483.5
CDS-3UTR CCA 90 bp GGATGCCAAAGCAGTCCCTTGACTGTCAGGACTTGTGCCTGCTCAGGGACCTTGGCACCACAGGCCGCATaGAGGGCACCACGTCATATG +
Preference number: 4 (lower is better)
Translates to: GCQSSPLTVRTCACSGTLAPQAA*RAPRHM
Trigger: CATATGACGTGGTGCCCTCCATGCGGCCTGTGGTGC...CAAGGTCCCTGAGCAGGCACAAGTCCTGACAGTCAAGGGACTGCTTTGGCATCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR CCA 90 bp CCAGGAGGTGAGGGGGTCCCCTGTTTCTCCCAGAACCTTGGGACCACAGGCAGCCTAGCTGCAGGGATTTaGCCAGCTCAAATATGCGCT +
Preference number: 4 (lower is better)
Translates to: PGGEGVPCFSQNLGTTGSLAAGI*PAQICA
Trigger: AGCGCATATTTGAGCTGGCCAAATCCCTGCAGCTAG...GCTGCCTGTGGTCCCAAGGTTCTGGGAGAAACAGGGGACCCCCTCACCTCCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000301050.7
ENST00000536187.6
ENST00000540990.5
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR CCA 90 bp TACCTGGAATGGGAGCCTAGTAGGGGTCACTGCCCAGGAGGTGAGGGGGTCCCCCTAGCTGCAGGGATTTaGCCAGCTCAAATATGCGCT +
Preference number: 4 (lower is better)
Translates to: YLEWEPSRGHCPGGEGVPLAAGI*PAQICA
Trigger: AGCGCATATTTGAGCTGGCCAAATCCCTGCAGCTAG...GGGGACCCCCTCACCTCCTGGGCAGTGACCCCTACTAGGCTCCCATTCCAGGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000301050.7
ENST00000536187.6
ENST00000540990.5
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR CCA 90 bp CTGAGTCTGGTGGGAAGGACCCTGCTAAGGGGATCCTGGCCTGAGGGCACTGCCCTAGCTGCAGGGATTTaGCCAGCTCAAATATGCGCT +
Preference number: 4 (lower is better)
Translates to: LSLVGRTLLRGSWPEGTALAAGI*PAQICA
Trigger: AGCGCATATTTGAGCTGGCCAAATCCCTGCAGCTAG...GGCAGTGCCCTCAGGCCAGGATCCCCTTAGCAGGGTCCTTCCCACCAGACTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR CCA 90 bp GCCCTCCTTCCCCAAACCCCCATCCAGGTTGGCTCCCATCTGCCACTTGGCTTCGAGCGAATGAGACGCTaGAGTACCTTTGGTGAGGAC +
Preference number: 4 (lower is better)
Translates to: ALLPQTPIQVGSHLPLGFERMRR*STFGED
Trigger: GTCCTCACCAAAGGTACTCCAGCGTCTCATTCGCTC...GAAGCCAAGTGGCAGATGGGAGCCAACCTGGATGGGGGTTTGGGGAAGGAGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR CCA 90 bp TTCCCCAAACCCCCATCCAGGTTGGCTCCCATCTGCCACTTGGCTTCACCATGCTCTGAAGTCCGGGGATaGCACTGGGAGGACCCAGAA +
Preference number: 4 (lower is better)
Translates to: FPKPPSRLAPICHLASPCSEVRG*HWEDPE
Trigger: TTCTGGGTCCTCCCAGTGCCATCCCCGGACTTCAGA...GCATGGTGAAGCCAAGTGGCAGATGGGAGCCAACCTGGATGGGGGTTTGGGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR CCA 90 bp CCAAAGCAGTCCCTTGACTGTCAGGACTTGTGCCTGCTCAGGGACCTTGTTTCTGATCCTGTCCAGGCTTaGCGGGAGCTCTCGCTGGCC +
Preference number: 4 (lower is better)
Translates to: PKQSLDCQDLCLLRDLVSDPVQA*RELSLA
Trigger: GGCCAGCGAGAGCTCCCGCCAAGCCTGGACAGGATC...AGAAACAAGGTCCCTGAGCAGGCACAAGTCCTGACAGTCAAGGGACTGCTTTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR CCA 90 bp ACATGCCCTCCTTCCCCAAACCCCCATCCAGGTTGGCTCCCATCTGCCACTTGGTTGTGCTCTGAGTCCTaGGCTAGAAGCCGGTCTTGG +
Preference number: 4 (lower is better)
Translates to: TCPPSPNPHPGWLPSATWLCSES*ARSRSW
Trigger: CCAAGACCGGCTTCTAGCCCAGGACTCAGAGCACAA...CCAAGTGGCAGATGGGAGCCAACCTGGATGGGGGTTTGGGGAAGGAGGGCATGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR CCA 90 bp CAAACCCCCATCCAGGTTGGCTCCCATCTGCCACTTGGCTTCACCATGCTCCTGGTCAGTAGCTATCCTTaGGCCAAGGCCGGTTGCGCT +
Preference number: 4 (lower is better)
Translates to: QTPIQVGSHLPLGFTMLLVSSYP*AKAGCA
Trigger: AGCGCAACCGGCCTTGGCCCAAGGATAGCTACTGAC...CAGGAGCATGGTGAAGCCAAGTGGCAGATGGGAGCCAACCTGGATGGGGGTTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR CCA 90 bp TTCCCCAAACCCCCATCCAGGTTGGCTCCCATCTGCCACTTGGCTTCACCATGCGTCAGTAGCTATCCTTaGGCCAAGGCCGGTTGCGCT +
Preference number: 4 (lower is better)
Translates to: FPKPPSRLAPICHLASPCVSSYP*AKAGCA
Trigger: AGCGCAACCGGCCTTGGCCCAAGGATAGCTACTGAC...GCATGGTGAAGCCAAGTGGCAGATGGGAGCCAACCTGGATGGGGGTTTGGGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR CCA 90 bp GGTGCAGAACACACAGCTAGTACCTGGAATGGGAGCCTAGTAGGGGTCACTGCCGGGCAGCTTCCTGTGTaGGAGGAGAGGAAGGTGCCA +
Preference number: 4 (lower is better)
Translates to: GAEHTASTWNGSLVGVTAGQLPV*EERKVP
Trigger: TGGCACCTTCCTCTCCTCCCACACAGGAAGCTGCCC...GGCAGTGACCCCTACTAGGCTCCCATTCCAGGTACTAGCTGTGTGTTCTGCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301050.7
ENST00000536187.6
ENST00000540990.5
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR CCA 90 bp ACTGGAGGCCCTGGATGCCAAAGCAGTCCCTTGACTGTCAGGACTTGTGCCTGCAACCCCCATCCAGGTTaGCTCCCATCTGCCACTTGG +
Preference number: 4 (lower is better)
Translates to: TGGPGCQSSPLTVRTCACNPHPG*LPSATW
Trigger: CCAAGTGGCAGATGGGAGCCAACCTGGATGGGGGTT...GCAGGCACAAGTCCTGACAGTCAAGGGACTGCTTTGGCATCCAGGGCCTCCAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR TCA 90 bp CATAAGGCAAGAGTAGCCGGGGAGACAGGTCCTCTGTGCCCTGTCTCTCCCCATGTACGCCACAGTAGCTaGCATTGGTCCTCACCGCAA +
Preference number: 4 (lower is better)
Translates to: HKARVAGETGPLCPVSPHVRHSS*HWSSPQ
Trigger: TTGCGGTGAGGACCAATGTCAGCTACTGTGGCGTAC...ATGGGGAGAGACAGGGCACAGAGGACCTGTCTCCCCGGCTACTCTTGCCTTATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000550190.1
ENST00000551544.5
CDS-3UTR TCA 90 bp ACTGGAGGCCCTGGATGCCAAAGCAGTCCCTTGACTGTCAGGACTTGTGCCTGCGTACGCCACAGTAGCTaGCATTGGTCCTCACCGCAA +
Preference number: 4 (lower is better)
Translates to: TGGPGCQSSPLTVRTCACVRHSS*HWSSPQ
Trigger: TTGCGGTGAGGACCAATGTCAGCTACTGTGGCGTAC...GCAGGCACAAGTCCTGACAGTCAAGGGACTGCTTTGGCATCCAGGGCCTCCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301050.7
ENST00000551544.5
CDS-3UTR TCA 90 bp TGCTCCAGTCTTGGATGTGGCTGCCACACCCCAGCAAACAGATGGGTGTGCCACCTTTGGCCTCAAAGTTaGCTCCAGAGCCCTGGACTG +
Preference number: 4 (lower is better)
Translates to: CSSLGCGCHTPANRWVCHLWPQS*LQSPGL
Trigger: CAGTCCAGGGCTCTGGAGTCAACTTTGAGGCCAAAG...GTGGCACACCCATCTGTTTGCTGGGGTGTGGCAGCCACATCCAAGACTGGAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301050.7
ENST00000551544.5
CDS-3UTR TCA 90 bp CATAAGGCAAGAGTAGCCGGGGAGACAGGTCCTCTGTGCCCTGTCTCTCCCCATCTTTGGCCTCAAAGTTaGCTCCAGAGCCCTGGACTG +
Preference number: 4 (lower is better)
Translates to: HKARVAGETGPLCPVSPHLWPQS*LQSPGL
Trigger: CAGTCCAGGGCTCTGGAGTCAACTTTGAGGCCAAAG...ATGGGGAGAGACAGGGCACAGAGGACCTGTCTCCCCGGCTACTCTTGCCTTATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000550190.1
ENST00000551544.5
CDS-3UTR TCA 90 bp GGTGCAGAACACACAGCTAGTACCTGGAATGGGAGCCTAGTAGGGGTCACTGCCCAGAGGAGCGCTCAATaGTGGTCCTCTTGCCCGGAT +
Preference number: 4 (lower is better)
Translates to: GAEHTASTWNGSLVGVTAQRSAQ*WSSCPD
Trigger: ATCCGGGCAAGAGGACCATCATTGAGCGCTCCTCTG...GGCAGTGACCCCTACTAGGCTCCCATTCCAGGTACTAGCTGTGTGTTCTGCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301050.7
ENST00000536187.6
ENST00000540990.5
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR TCA 90 bp GGTGCAGAACACACAGCTAGTACCTGGAATGGGAGCCTAGTAGGGGTCACTGCCGCTGTGCTGGGTGGTTaGTGGTGTCAGCGTCCAACA +
Preference number: 4 (lower is better)
Translates to: GAEHTASTWNGSLVGVTAAVLGG*WCQRPT
Trigger: TGTTGGACGCTGACACCATCAACCACCCAGCACAGC...GGCAGTGACCCCTACTAGGCTCCCATTCCAGGTACTAGCTGTGTGTTCTGCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301050.7
ENST00000536187.6
ENST00000540990.5
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR TCA 90 bp GCAGAACACACAGCTAGTACCTGGAATGGGAGCCTAGTAGGGGTCACTGCCCAGCAGGTGCTTCATCTGTaGCTTCCCCCGGGAGCGAAT +
Preference number: 4 (lower is better)
Translates to: AEHTASTWNGSLVGVTAQQVLHL*LPPGAN
Trigger: ATTCGCTCCCGGGGGAAGTCACAGATGAAGCACCTG...CTGGGCAGTGACCCCTACTAGGCTCCCATTCCAGGTACTAGCTGTGTGTTCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000301050.7
ENST00000536187.6
ENST00000540990.5
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR TCA 90 bp GTTGAGCACAGATCGCTTTGCCAGGGAGAGGTCGGCTGTGACTCGGGTGATGGAGACTCCGGTGGGCACTaGACCAGCTTATCATATGCC +
Preference number: 4 (lower is better)
Translates to: VEHRSLCQGEVGCDSGDGDSGGH*TSLSYA
Trigger: GGCATATGATAAGCTGGTTCAGTGCCCACCGGAGTC...TCCATCACCCGAGTCACAGCCGACCTCTCCCTGGCAAAGCGATCTGTGCTCAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551544.5
CDS-3UTR TCA 90 bp GTCACTTTAATGGGGCATCCCTTCCCTGAGTCTGGTGGGAAGGACCCTGCTAAGGCGGGAGCTACGCTGTaGAGATCCTGTCCAGGCTTG +
Preference number: 4 (lower is better)
Translates to: VTLMGHPFPESGGKDPAKAGATL*RSCPGL
Trigger: CAAGCCTGGACAGGATCTTCACAGCGTAGCTCCCGC...CTTAGCAGGGTCCTTCCCACCAGACTCAGGGAAGGGATGCCCCATTAAAGTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR TCA 90 bp CATAAGGCAAGAGTAGCCGGGGAGACAGGTCCTCTGTGCCCTGTCTCTCCCCATGCCAAAGCAGTCCCTTaGCTGTCAGGACTTGTGCCT +
Preference number: 4 (lower is better)
Translates to: HKARVAGETGPLCPVSPHAKAVP*LSGLVP
Trigger: AGGCACAAGTCCTGACAGTCAAGGGACTGCTTTGGC...ATGGGGAGAGACAGGGCACAGAGGACCTGTCTCCCCGGCTACTCTTGCCTTATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR TCA 90 bp CTGCTCCAGTCTTGGATGTGGCTGCCACACCCCAGCAAACAGATGGGTGTGCCATCTAATGTATGGCAGTaGGGTGACTGGAGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: LLQSWMWLPHPSKQMGVPSNVWQ*GDWRPW
Trigger: CCAGGGCCTCCAGTCACCTCACTGCCATACATTAGA...TGGCACACCCATCTGTTTGCTGGGGTGTGGCAGCCACATCCAAGACTGGAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR TCA 90 bp CTGCTCCAGTCTTGGATGTGGCTGCCACACCCCAGCAAACAGATGGGTGTGCCATGCAGGGCAAAAGAATaGGAAAGGCAAGGAGGCCCC +
Preference number: 4 (lower is better)
Translates to: LLQSWMWLPHPSKQMGVPCRAKE*ERQGGP
Trigger: GGGGCCTCCTTGCCTTTCTCATTCTTTTGCCCTGCA...TGGCACACCCATCTGTTTGCTGGGGTGTGGCAGCCACATCCAAGACTGGAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR TCA 90 bp AGCCGGTCTTGGGGGTCATGCCCGTTAGCACTAGGCAGCCCCGAGGTGTGTTGGGGACAAGAACAGAAATaGCAGGATGCAGGGCAAAAG +
Preference number: 4 (lower is better)
Translates to: SRSWGSCPLALGSPEVCWGQEQK*QDAGQK
Trigger: CTTTTGCCCTGCATCCTGTCATTTCTGTTCTTGTCC...CCAACACACCTCGGGGCTGCCTAGTGCTAACGGGCATGACCCCCAAGACCGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000551544.5
CDS-3UTR TCA 90 bp AGGGAGAGGTCGGCTGTGACTCGGGTGATGGAGATCCTGCCATCAAATCTGTGTCACTCCAGCAGGCTTTaGGGGCTCCCGAATGGTGGA +
Preference number: 4 (lower is better)
Translates to: RERSAVTRVMEILPSNLCHSSRL*GLPNGG
Trigger: TCCACCATTCGGGAGCCCTCAAAGCCTGCTGGAGTG...ACACAGATTTGATGGCAGGATCTCCATCACCCGAGTCACAGCCGACCTCTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550483.5
CDS-3UTR GCA 90 bp CCAAAGCAGTCCCTTGACTGTCAGGACTTGTGCCTGCTCAGGGACCTTGTTTCTGCCGCGAAGACCAGCTaGTCGGAGCTCAGATCACCG +
Preference number: 4 (lower is better)
Translates to: PKQSLDCQDLCLLRDLVSAAKTS*SELRSP
Trigger: CGGTGATCTGAGCTCCGAGCAGCTGGTCTTCGCGGC...AGAAACAAGGTCCCTGAGCAGGCACAAGTCCTGACAGTCAAGGGACTGCTTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301050.7
CDS-3UTR GCA 90 bp TTCCCCAAACCCCCATCCAGGTTGGCTCCCATCTGCCACTTGGCTTCACCATGCGGTCCTCACCGCAAATaGCACAGGTTTGTGCTTGGC +
Preference number: 4 (lower is better)
Translates to: FPKPPSRLAPICHLASPCGPHRK*HRFVLG
Trigger: GCCAAGCACAAACCTGTGGCATTTGCGGTGAGGACC...GCATGGTGAAGCCAAGTGGCAGATGGGAGCCAACCTGGATGGGGGTTTGGGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301050.7
ENST00000551544.5
CDS-3UTR GCA 90 bp TTCCCCAAACCCCCATCCAGGTTGGCTCCCATCTGCCACTTGGCTTCACCATGCGATCTCCTGGCCTTCTaGTCCTGTTTGAGCCGGATG +
Preference number: 4 (lower is better)
Translates to: FPKPPSRLAPICHLASPCDLLAF*SCLSRM
Trigger: CATCCGGCTCAAACAGGAGCAGAAGGCCAGGAGATC...GCATGGTGAAGCCAAGTGGCAGATGGGAGCCAACCTGGATGGGGGTTTGGGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR GCA 90 bp ACTGGAGGCCCTGGATGCCAAAGCAGTCCCTTGACTGTCAGGACTTGTGCCTGCGATCTCCTGGCCTTCTaGTCCTGTTTGAGCCGGATG +
Preference number: 4 (lower is better)
Translates to: TGGPGCQSSPLTVRTCACDLLAF*SCLSRM
Trigger: CATCCGGCTCAAACAGGAGCAGAAGGCCAGGAGATC...GCAGGCACAAGTCCTGACAGTCAAGGGACTGCTTTGGCATCCAGGGCCTCCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR GCA 90 bp AGGGAGAGGTCGGCTGTGACTCGGGTGATGGAGATCCTGCCATCAAATCTGTGTGAGGGGAGCGTCGGTTaGCAATGTCACTCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: RERSAVTRVMEILPSNLCEGSVG*QCHSGW
Trigger: CCAGCCTGAGTGACATTGGCAACCGACGCTCCCCTC...ACACAGATTTGATGGCAGGATCTCCATCACCCGAGTCACAGCCGACCTCTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000550391.5
ENST00000550483.5
ENST00000551544.5
CDS-3UTR GCA 90 bp TACCTGGAATGGGAGCCTAGTAGGGGTCACTGCCCAGGAGGTGAGGGGGTCCCCTGTTCCGCCTGCTTTTaGTTCTGCTTGGCTAGAGAT +
Preference number: 4 (lower is better)
Translates to: YLEWEPSRGHCPGGEGVPCSACF*FCLARD
Trigger: ATCTCTAGCCAAGCAGAAGCAAAAGCAGGCGGAACA...GGGGACCCCCTCACCTCCTGGGCAGTGACCCCTACTAGGCTCCCATTCCAGGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000301050.7
ENST00000536187.6
ENST00000540990.5
ENST00000547230.5
ENST00000551544.5
CDS-3UTR GCA 90 bp TGGGGCATCCCTTCCCTGAGTCTGGTGGGAAGGACCCTGCTAAGGGGATCCTGGGGAACATGTTCCGCCTaGTTTTGCTTCTGCTTGGCT +
Preference number: 4 (lower is better)
Translates to: WGIPSLSLVGRTLLRGSWGTCSA*FCFCLA
Trigger: AGCCAAGCAGAAGCAAAAGCAGGCGGAACATGTTCC...CCAGGATCCCCTTAGCAGGGTCCTTCCCACCAGACTCAGGGAAGGGATGCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR GCA 90 bp GCAGAACACACAGCTAGTACCTGGAATGGGAGCCTAGTAGGGGTCACTGCCCAGGAGCACAGATCGCTTTaGCAGGGAGAGGTCGGCTGT +
Preference number: 4 (lower is better)
Translates to: AEHTASTWNGSLVGVTAQEHRSL*QGEVGC
Trigger: ACAGCCGACCTCTCCCTGGCAAAGCGATCTGTGCTC...CTGGGCAGTGACCCCTACTAGGCTCCCATTCCAGGTACTAGCTGTGTGTTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301050.7
ENST00000536187.6
ENST00000540990.5
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR GCA 90 bp GGTGCAGAACACACAGCTAGTACCTGGAATGGGAGCCTAGTAGGGGTCACTGCCGAGCACAGATCGCTTTaGCAGGGAGAGGTCGGCTGT +
Preference number: 4 (lower is better)
Translates to: GAEHTASTWNGSLVGVTAEHRSL*QGEVGC
Trigger: ACAGCCGACCTCTCCCTGGCAAAGCGATCTGTGCTC...GGCAGTGACCCCTACTAGGCTCCCATTCCAGGTACTAGCTGTGTGTTCTGCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301050.7
ENST00000536187.6
ENST00000540990.5
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR GCA 90 bp TTGTTGAGCACAGATCGCTTTGCCAGGGAGAGGTCGGCTGTGACTCGGGTGATGGAGCACAGATCGCTTTaGCAGGGAGAGGTCGGCTGT +
Preference number: 4 (lower is better)
Translates to: LLSTDRFARERSAVTRVMEHRSL*QGEVGC
Trigger: ACAGCCGACCTCTCCCTGGCAAAGCGATCTGTGCTC...CATCACCCGAGTCACAGCCGACCTCTCCCTGGCAAAGCGATCTGTGCTCAACAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000550391.5
ENST00000550483.5
ENST00000551544.5
CDS-3UTR GCA 90 bp CATAAGGCAAGAGTAGCCGGGGAGACAGGTCCTCTGTGCCCTGTCTCTCCCCATCGCTCGATCTCACTCTaGACTTCCGCAATGCTGGAG +
Preference number: 4 (lower is better)
Translates to: HKARVAGETGPLCPVSPHRSISL*TSAMLE
Trigger: CTCCAGCATTGCGGAAGTGCAGAGTGAGATCGAGCG...ATGGGGAGAGACAGGGCACAGAGGACCTGTCTCCCCGGCTACTCTTGCCTTATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR GCA 90 bp CAAACCCCCATCCAGGTTGGCTCCCATCTGCCACTTGGCTTCACCATGCTCCTGCGCTCGATCTCACTCTaGACTTCCGCAATGCTGGAG +
Preference number: 4 (lower is better)
Translates to: QTPIQVGSHLPLGFTMLLRSISL*TSAMLE
Trigger: CTCCAGCATTGCGGAAGTGCAGAGTGAGATCGAGCG...CAGGAGCATGGTGAAGCCAAGTGGCAGATGGGAGCCAACCTGGATGGGGGTTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR GCA 90 bp GCCCTCCTTCCCCAAACCCCCATCCAGGTTGGCTCCCATCTGCCACTTGGCTTCTGGCCAGCTCAAATATaGGCTCGATCTCACTCTGCA +
Preference number: 4 (lower is better)
Translates to: ALLPQTPIQVGSHLPLGFWPAQI*ARSHSA
Trigger: TGCAGAGTGAGATCGAGCGCATATTTGAGCTGGCCA...GAAGCCAAGTGGCAGATGGGAGCCAACCTGGATGGGGGTTTGGGGAAGGAGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR GCA 90 bp CATAAGGCAAGAGTAGCCGGGGAGACAGGTCCTCTGTGCCCTGTCTCTCCCCATGTCCTGGTAGGCATCTaGATAGTCCTCCTCCAGGTG +
Preference number: 4 (lower is better)
Translates to: HKARVAGETGPLCPVSPHVLVGI*IVLLQV
Trigger: CACCTGGAGGAGGACTATGCAGATGCCTACCAGGAC...ATGGGGAGAGACAGGGCACAGAGGACCTGTCTCCCCGGCTACTCTTGCCTTATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR GCA 90 bp GTCACTTTAATGGGGCATCCCTTCCCTGAGTCTGGTGGGAAGGACCCTGCTAAGCGGTCTTGGGGGTCATaGCCGTTAGCACTAGGCAGC +
Preference number: 4 (lower is better)
Translates to: VTLMGHPFPESGGKDPAKRSWGS*PLALGS
Trigger: GCTGCCTAGTGCTAACGGGCATGACCCCCAAGACCG...CTTAGCAGGGTCCTTCCCACCAGACTCAGGGAAGGGATGCCCCATTAAAGTGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR GCA 90 bp GTGCCCTGTCTCTCCCCATCTAACCCTAACCTAACAAGCGGCAGCTATGAGTCACAAGGCCGGTTGCGCTaGCAGTTCCGGTCACTGTGG +
Preference number: 4 (lower is better)
Translates to: VPCLSPSNPNLTSGSYESQGRLR*QFRSLW
Trigger: CCACAGTGACCGGAACTGGCAGCGCAACCGGCCTTG...TGACTCATAGCTGCCGCTTGTTAGGTTAGGGTTAGATGGGGAGAGACAGGGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR GCA 90 bp CGGTGGGCACTGAACCAGCTTATCATATGCCATCATCTGTACGGTCAGGTGCTTAGCTGCGCCTGTGCCTaGCAGGGTAGGGCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: RWALNQLIICHHLYGQVLSCACA*QGRAAG
Trigger: TCCTGCTGCCCTACCCTGGCAGGCACAGGCGCAGCT...AAGCACCTGACCGTACAGATGATGGCATATGATAAGCTGGTTCAGTGCCCACCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551544.5
CDS-3UTR GCA 90 bp AGGCCCTGGATGCCAAAGCAGTCCCTTGACTGTCAGGACTTGTGCCTGCTCAGGGAGACAGGTCCTCTGTaGCCTGTCTCTCCCCATCTA +
Preference number: 4 (lower is better)
Translates to: RPWMPKQSLDCQDLCLLRETGPL*PVSPHL
Trigger: TAGATGGGGAGAGACAGGGCACAGAGGACCTGTCTC...CCTGAGCAGGCACAAGTCCTGACAGTCAAGGGACTGCTTTGGCATCCAGGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR GCA 90 bp GCATTCATCGAAGCCAATGCTGGAGCGGGCAGAGGAGCGCTCAATGATGGTCCTAGGAGCTCTGCCCACTaGTCACTCCAGCAGGCTTTG +
Preference number: 4 (lower is better)
Translates to: AFIEANAGAGRGALNDGPRSSAH*SLQQAL
Trigger: CAAAGCCTGCTGGAGTGAGCAGTGGGCAGAGCTCCT...AGGACCATCATTGAGCGCTCCTCTGCCCGCTCCAGCATTGGCTTCGATGAATGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550483.5
CDS-3UTR CCA 90 bp CATAAGGCAAGAGTAGCCGGGGAGACAGGTCCTCTGTGCCCTGTCTCTCCCCATCCACAGGTTTGTGCTTaGCCCTTTCGAGCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: HKARVAGETGPLCPVSPHPQVCA*PFRAAA
Trigger: AGCAGCAGCTCGAAAGGGCCAAGCACAAACCTGTGG...ATGGGGAGAGACAGGGCACAGAGGACCTGTCTCCCCGGCTACTCTTGCCTTATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301050.7
ENST00000551544.5
CDS-3UTR CCA 90 bp GGTGCAGAACACACAGCTAGTACCTGGAATGGGAGCCTAGTAGGGGTCACTGCCTCCAGAGCCCTGGACTaGGCACTCCTCATCCAGTAC +
Preference number: 4 (lower is better)
Translates to: GAEHTASTWNGSLVGVTASRALD*ALLIQY
Trigger: GTACTGGATGAGGAGTGCCCAGTCCAGGGCTCTGGA...GGCAGTGACCCCTACTAGGCTCCCATTCCAGGTACTAGCTGTGTGTTCTGCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301050.7
ENST00000536187.6
ENST00000540990.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR CCA 90 bp TTGTTGAGCACAGATCGCTTTGCCAGGGAGAGGTCGGCTGTGACTCGGGTGATGTCCAGAGCCCTGGACTaGGCACTCCTCATCCAGTAC +
Preference number: 4 (lower is better)
Translates to: LLSTDRFARERSAVTRVMSRALD*ALLIQY
Trigger: GTACTGGATGAGGAGTGCCCAGTCCAGGGCTCTGGA...CATCACCCGAGTCACAGCCGACCTCTCCCTGGCAAAGCGATCTGTGCTCAACAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000550391.5
ENST00000551544.5
CDS-3UTR CCA 90 bp GGTGCAGAACACACAGCTAGTACCTGGAATGGGAGCCTAGTAGGGGTCACTGCCTTGACTCCAGAGCCCTaGACTGGGCACTCCTCATCC +
Preference number: 4 (lower is better)
Translates to: GAEHTASTWNGSLVGVTALTPEP*TGHSSS
Trigger: GGATGAGGAGTGCCCAGTCCAGGGCTCTGGAGTCAA...GGCAGTGACCCCTACTAGGCTCCCATTCCAGGTACTAGCTGTGTGTTCTGCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301050.7
ENST00000536187.6
ENST00000540990.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR CCA 90 bp TTGTTGAGCACAGATCGCTTTGCCAGGGAGAGGTCGGCTGTGACTCGGGTGATGTTGACTCCAGAGCCCTaGACTGGGCACTCCTCATCC +
Preference number: 4 (lower is better)
Translates to: LLSTDRFARERSAVTRVMLTPEP*TGHSSS
Trigger: GGATGAGGAGTGCCCAGTCCAGGGCTCTGGAGTCAA...CATCACCCGAGTCACAGCCGACCTCTCCCTGGCAAAGCGATCTGTGCTCAACAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000550391.5
ENST00000551544.5
CDS-3UTR CCA 90 bp GCAGAACACACAGCTAGTACCTGGAATGGGAGCCTAGTAGGGGTCACTGCCCAGTTGACTCCAGAGCCCTaGACTGGGCACTCCTCATCC +
Preference number: 4 (lower is better)
Translates to: AEHTASTWNGSLVGVTAQLTPEP*TGHSSS
Trigger: GGATGAGGAGTGCCCAGTCCAGGGCTCTGGAGTCAA...CTGGGCAGTGACCCCTACTAGGCTCCCATTCCAGGTACTAGCTGTGTGTTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301050.7
ENST00000536187.6
ENST00000540990.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR CCA 90 bp CATATGGGGGAACATGTTCCGCCTAGAGATGGCGGAGGGGAGCGTCGGTTGCCACAATGTCACTCAGGCTaGAAGGGTTCCCAGATCTCC +
Preference number: 4 (lower is better)
Translates to: HMGEHVPPRDGGGERRLPQCHSG*KGSQIS
Trigger: GGAGATCTGGGAACCCTTCCAGCCTGAGTGACATTG...TGGCAACCGACGCTCCCCTCCGCCATCTCTAGGCGGAACATGTTCCCCCATATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000548874.5
CDS-3UTR CCA 90 bp CCTTTTGTCACTTTAATGGGGCATCCCTTCCCTGAGTCTGGTGGGAAGGACCCTGCACTTCCGCAATGCTaGAGCGGGCAGAGGAGCGCT +
Preference number: 4 (lower is better)
Translates to: PFVTLMGHPFPESGGKDPALPQC*SGQRSA
Trigger: AGCGCTCCTCTGCCCGCTCCAGCATTGCGGAAGTGC...AGGGTCCTTCCCACCAGACTCAGGGAAGGGATGCCCCATTAAAGTGACAAAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR CCA 90 bp GACCTTGTTTCTTCCTCATGCCATGGTGCCCACACCCCACCCTTTTGTCACTTTGGGCTGGGTGGTGCGTaGCCCGCCAGTAAACCTCCA +
Preference number: 4 (lower is better)
Translates to: DLVSSSCHGAHTPPFCHFGLGGA*PASKPP
Trigger: TGGAGGTTTACTGGCGGGCCACGCACCACCCAGCCC...AAAGTGACAAAAGGGTGGGGTGTGGGCACCATGGCATGAGGAAGAAACAAGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR CCA 90 bp ATCTGTACGGTCAGGTGCTTCATCTGTGACTTCCCCCGGGAGCGAATGAGACGCTCTGAAGTCCGGGGATaGCACTGGGAGGACCCAGAA +
Preference number: 4 (lower is better)
Translates to: ICTVRCFICDFPRERMRRSEVRG*HWEDPE
Trigger: TTCTGGGTCCTCCCAGTGCCATCCCCGGACTTCAGA...GCGTCTCATTCGCTCCCGGGGGAAGTCACAGATGAAGCACCTGACCGTACAGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000551544.5
CDS-3UTR CCA 90 bp GGTGCAGAACACACAGCTAGTACCTGGAATGGGAGCCTAGTAGGGGTCACTGCCGCTAGAAGCCGGTCTTaGGGGTCATGCCCGTTAGCA +
Preference number: 4 (lower is better)
Translates to: GAEHTASTWNGSLVGVTAARSRS*GSCPLA
Trigger: TGCTAACGGGCATGACCCCCAAGACCGGCTTCTAGC...GGCAGTGACCCCTACTAGGCTCCCATTCCAGGTACTAGCTGTGTGTTCTGCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000301050.7
ENST00000536187.6
ENST00000540990.5
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR CCA 90 bp TGCTCCAGTCTTGGATGTGGCTGCCACACCCCAGCAAACAGATGGGTGTGCCACTTGTGCTCTGAGTCCTaGGCTAGAAGCCGGTCTTGG +
Preference number: 4 (lower is better)
Translates to: CSSLGCGCHTPANRWVCHLCSES*ARSRSW
Trigger: CCAAGACCGGCTTCTAGCCCAGGACTCAGAGCACAA...GTGGCACACCCATCTGTTTGCTGGGGTGTGGCAGCCACATCCAAGACTGGAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR CCA 90 bp GCAGAACACACAGCTAGTACCTGGAATGGGAGCCTAGTAGGGGTCACTGCCCAGGTCAGTAGCTATCCTTaGGCCAAGGCCGGTTGCGCT +
Preference number: 4 (lower is better)
Translates to: AEHTASTWNGSLVGVTAQVSSYP*AKAGCA
Trigger: AGCGCAACCGGCCTTGGCCCAAGGATAGCTACTGAC...CTGGGCAGTGACCCCTACTAGGCTCCCATTCCAGGTACTAGCTGTGTGTTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301050.7
ENST00000536187.6
ENST00000540990.5
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR CCA 90 bp GGATGCCAAAGCAGTCCCTTGACTGTCAGGACTTGTGCCTGCTCAGGGACCTTGGGTGACTGGAGGCCCTaGATGCCAAAGCAGTCCCTT +
Preference number: 4 (lower is better)
Translates to: GCQSSPLTVRTCACSGTLGDWRP*MPKQSL
Trigger: AAGGGACTGCTTTGGCATCCAGGGCCTCCAGTCACC...CAAGGTCCCTGAGCAGGCACAAGTCCTGACAGTCAAGGGACTGCTTTGGCATCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR CCA 90 bp CTGCTCCAGTCTTGGATGTGGCTGCCACACCCCAGCAAACAGATGGGTGTGCCACTCCAGTCTTGGATGTaGCTGCCACACCCCAGCAAA +
Preference number: 4 (lower is better)
Translates to: LLQSWMWLPHPSKQMGVPLQSWM*LPHPSK
Trigger: TTTGCTGGGGTGTGGCAGCCACATCCAAGACTGGAG...TGGCACACCCATCTGTTTGCTGGGGTGTGGCAGCCACATCCAAGACTGGAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR CCA 90 bp ACTGGAGGCCCTGGATGCCAAAGCAGTCCCTTGACTGTCAGGACTTGTGCCTGCCTCCAGTCTTGGATGTaGCTGCCACACCCCAGCAAA +
Preference number: 4 (lower is better)
Translates to: TGGPGCQSSPLTVRTCACLQSWM*LPHPSK
Trigger: TTTGCTGGGGTGTGGCAGCCACATCCAAGACTGGAG...GCAGGCACAAGTCCTGACAGTCAAGGGACTGCTTTGGCATCCAGGGCCTCCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR CCA 90 bp TTCCCCAAACCCCCATCCAGGTTGGCTCCCATCTGCCACTTGGCTTCACCATGCGCTTCACCATGCTCCTaGTCCCTGGTCCTGTCACAT +
Preference number: 4 (lower is better)
Translates to: FPKPPSRLAPICHLASPCASPCS*SLVLSH
Trigger: ATGTGACAGGACCAGGGACCAGGAGCATGGTGAAGC...GCATGGTGAAGCCAAGTGGCAGATGGGAGCCAACCTGGATGGGGGTTTGGGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR CCA 90 bp CAAACCCCCATCCAGGTTGGCTCCCATCTGCCACTTGGCTTCACCATGCTCCTGGCTTCACCATGCTCCTaGTCCCTGGTCCTGTCACAT +
Preference number: 4 (lower is better)
Translates to: QTPIQVGSHLPLGFTMLLASPCS*SLVLSH
Trigger: ATGTGACAGGACCAGGGACCAGGAGCATGGTGAAGC...CAGGAGCATGGTGAAGCCAAGTGGCAGATGGGAGCCAACCTGGATGGGGGTTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR CCA 90 bp GCAGAACACACAGCTAGTACCTGGAATGGGAGCCTAGTAGGGGTCACTGCCCAGAACCCCCATCCAGGTTaGCTCCCATCTGCCACTTGG +
Preference number: 4 (lower is better)
Translates to: AEHTASTWNGSLVGVTAQNPHPG*LPSATW
Trigger: CCAAGTGGCAGATGGGAGCCAACCTGGATGGGGGTT...CTGGGCAGTGACCCCTACTAGGCTCCCATTCCAGGTACTAGCTGTGTGTTCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
3UTR CAA 72 bp TTCTGCTTGGCTAGAGATGGCGGAGGGGAGCGTCGGTaGCCAATGTCACTCAGGCTGGAAGGGTTCCCAGAT +
Preference number: 4 (lower is better)
Translates to: FCLARDGGGERR*PMSLRLEGFPD
Trigger: ATCTGGGAACCCTTCCAGCCTGAGTGACATTGGCAACCGACGCTCCCCTCCGCCATCTCTAGCCAAGCAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551544.5
CDS-3UTR TCA 90 bp TTAATGGGGCATCCCTTCCCTGAGTCTGGTGGGAAGGACCCTGCTAAGGGGATCCTTTCGAGCTGCTGCTaGGCCTGGCTCTCTACTTCA +
Preference number: 4 (lower is better)
Translates to: LMGHPFPESGGKDPAKGILSSCC*AWLSTS
Trigger: TGAAGTAGAGAGCCAGGCTCAGCAGCAGCTCGAAAG...GATCCCCTTAGCAGGGTCCTTCCCACCAGACTCAGGGAAGGGATGCCCCATTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR TCA 90 bp GGTGCAGAACACACAGCTAGTACCTGGAATGGGAGCCTAGTAGGGGTCACTGCCCTTTCGAGCTGCTGCTaGGCCTGGCTCTCTACTTCA +
Preference number: 4 (lower is better)
Translates to: GAEHTASTWNGSLVGVTALSSCC*AWLSTS
Trigger: TGAAGTAGAGAGCCAGGCTCAGCAGCAGCTCGAAAG...GGCAGTGACCCCTACTAGGCTCCCATTCCAGGTACTAGCTGTGTGTTCTGCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301050.7
ENST00000536187.6
ENST00000540990.5
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR TCA 90 bp GGTGCAGAACACACAGCTAGTACCTGGAATGGGAGCCTAGTAGGGGTCACTGCCGTACGCCACAGTAGCTaGCATTGGTCCTCACCGCAA +
Preference number: 4 (lower is better)
Translates to: GAEHTASTWNGSLVGVTAVRHSS*HWSSPQ
Trigger: TTGCGGTGAGGACCAATGTCAGCTACTGTGGCGTAC...GGCAGTGACCCCTACTAGGCTCCCATTCCAGGTACTAGCTGTGTGTTCTGCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301050.7
ENST00000536187.6
ENST00000540990.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR TCA 90 bp GCAGAACACACAGCTAGTACCTGGAATGGGAGCCTAGTAGGGGTCACTGCCCAGGTACGCCACAGTAGCTaGCATTGGTCCTCACCGCAA +
Preference number: 4 (lower is better)
Translates to: AEHTASTWNGSLVGVTAQVRHSS*HWSSPQ
Trigger: TTGCGGTGAGGACCAATGTCAGCTACTGTGGCGTAC...CTGGGCAGTGACCCCTACTAGGCTCCCATTCCAGGTACTAGCTGTGTGTTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301050.7
ENST00000536187.6
ENST00000540990.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR TCA 90 bp TTGTTGAGCACAGATCGCTTTGCCAGGGAGAGGTCGGCTGTGACTCGGGTGATGGTACGCCACAGTAGCTaGCATTGGTCCTCACCGCAA +
Preference number: 4 (lower is better)
Translates to: LLSTDRFARERSAVTRVMVRHSS*HWSSPQ
Trigger: TTGCGGTGAGGACCAATGTCAGCTACTGTGGCGTAC...CATCACCCGAGTCACAGCCGACCTCTCCCTGGCAAAGCGATCTGTGCTCAACAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000550391.5
ENST00000551544.5
CDS-3UTR TCA 90 bp TTGTTGAGCACAGATCGCTTTGCCAGGGAGAGGTCGGCTGTGACTCGGGTGATGCTTTGGCCTCAAAGTTaGCTCCAGAGCCCTGGACTG +
Preference number: 4 (lower is better)
Translates to: LLSTDRFARERSAVTRVMLWPQS*LQSPGL
Trigger: CAGTCCAGGGCTCTGGAGTCAACTTTGAGGCCAAAG...CATCACCCGAGTCACAGCCGACCTCTCCCTGGCAAAGCGATCTGTGCTCAACAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000550391.5
ENST00000551544.5
CDS-3UTR TCA 90 bp CCTTTTGTCACTTTAATGGGGCATCCCTTCCCTGAGTCTGGTGGGAAGGACCCTCCTTCTGCTCCTGTTTaGGCCGGATGCTCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: PFVTLMGHPFPESGGKDPPSAPV*AGCSPG
Trigger: GCCTGGAGAGCATCCGGCTCAAACAGGAGCAGAAGG...AGGGTCCTTCCCACCAGACTCAGGGAAGGGATGCCCCATTAAAGTGACAAAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR TCA 90 bp TACCTGGAATGGGAGCCTAGTAGGGGTCACTGCCCAGGAGGTGAGGGGGTCCCCTCTGCATCATGTCTGTaGCCTCATAACCTTTCAGAG +
Preference number: 4 (lower is better)
Translates to: YLEWEPSRGHCPGGEGVPSASCL*PHNLSE
Trigger: CTCTGAAAGGTTATGAGGTCACAGACATGATGCAGA...GGGGACCCCCTCACCTCCTGGGCAGTGACCCCTACTAGGCTCCCATTCCAGGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000301050.7
ENST00000536187.6
ENST00000540990.5
ENST00000547230.5
ENST00000551544.5
CDS-3UTR TCA 90 bp CCAGGAGGTGAGGGGGTCCCCTGTTTCTCCCAGAACCTTGGGACCACAGGCAGCTCTGCATCATGTCTGTaGCCTCATAACCTTTCAGAG +
Preference number: 4 (lower is better)
Translates to: PGGEGVPCFSQNLGTTGSSASCL*PHNLSE
Trigger: CTCTGAAAGGTTATGAGGTCACAGACATGATGCAGA...GCTGCCTGTGGTCCCAAGGTTCTGGGAGAAACAGGGGACCCCCTCACCTCCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301050.7
ENST00000536187.6
ENST00000540990.5
ENST00000547230.5
ENST00000551544.5
CDS-3UTR TCA 90 bp CCAGGAGGTGAGGGGGTCCCCTGTTTCTCCCAGAACCTTGGGACCACAGGCAGCCATCAAATCTGTGTTTaGGGAAGTCGAAGAGAGCCT +
Preference number: 4 (lower is better)
Translates to: PGGEGVPCFSQNLGTTGSHQICV*GSRREP
Trigger: AGGCTCTCTTCGACTTCCTCAAACACAGATTTGATG...GCTGCCTGTGGTCCCAAGGTTCTGGGAGAAACAGGGGACCCCCTCACCTCCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000301050.7
ENST00000536187.6
ENST00000540990.5
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR TCA 90 bp TACCTGGAATGGGAGCCTAGTAGGGGTCACTGCCCAGGAGGTGAGGGGGTCCCCCATCAAATCTGTGTTTaGGGAAGTCGAAGAGAGCCT +
Preference number: 4 (lower is better)
Translates to: YLEWEPSRGHCPGGEGVPHQICV*GSRREP
Trigger: AGGCTCTCTTCGACTTCCTCAAACACAGATTTGATG...GGGGACCCCCTCACCTCCTGGGCAGTGACCCCTACTAGGCTCCCATTCCAGGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000301050.7
ENST00000536187.6
ENST00000540990.5
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR TCA 90 bp CCTTTTGTCACTTTAATGGGGCATCCCTTCCCTGAGTCTGGTGGGAAGGACCCTTCCCCCGGGAGCGAATaGGACGCTGGAGTACCTTTG +
Preference number: 4 (lower is better)
Translates to: PFVTLMGHPFPESGGKDPSPGSE*DAGVPL
Trigger: CAAAGGTACTCCAGCGTCTCATTCGCTCCCGGGGGA...AGGGTCCTTCCCACCAGACTCAGGGAAGGGATGCCCCATTAAAGTGACAAAAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR TCA 90 bp GTCACTTTAATGGGGCATCCCTTCCCTGAGTCTGGTGGGAAGGACCCTGCTAAGCAGGTGCTTCATCTGTaGCTTCCCCCGGGAGCGAAT +
Preference number: 4 (lower is better)
Translates to: VTLMGHPFPESGGKDPAKQVLHL*LPPGAN
Trigger: ATTCGCTCCCGGGGGAAGTCACAGATGAAGCACCTG...CTTAGCAGGGTCCTTCCCACCAGACTCAGGGAAGGGATGCCCCATTAAAGTGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR TCA 90 bp TTAATGGGGCATCCCTTCCCTGAGTCTGGTGGGAAGGACCCTGCTAAGGGGATCGACTCCGGTGGGCACTaGACCAGCTTATCATATGCC +
Preference number: 4 (lower is better)
Translates to: LMGHPFPESGGKDPAKGIDSGGH*TSLSYA
Trigger: GGCATATGATAAGCTGGTTCAGTGCCCACCGGAGTC...GATCCCCTTAGCAGGGTCCTTCCCACCAGACTCAGGGAAGGGATGCCCCATTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR TCA 90 bp GACCTTGTTTCTTCCTCATGCCATGGTGCCCACACCCCACCCTTTTGTCACTTTGAGGTGTGTTGGCGGTaGGGCTGGTACAGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: DLVSSSCHGAHTPPFCHFEVCWR*GWYRSW
Trigger: CCAGGACCTGTACCAGCCTCACCGCCAACACACCTC...AAAGTGACAAAAGGGTGGGGTGTGGGCACCATGGCATGAGGAAGAAACAAGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR TCA 90 bp CCTTTTGTCACTTTAATGGGGCATCCCTTCCCTGAGTCTGGTGGGAAGGACCCTTGTATGGCAGTGAGGTaGCTGGAGGCCCTGGATGCC +
Preference number: 4 (lower is better)
Translates to: PFVTLMGHPFPESGGKDPCMAVR*LEALDA
Trigger: GGCATCCAGGGCCTCCAGTCACCTCACTGCCATACA...AGGGTCCTTCCCACCAGACTCAGGGAAGGGATGCCCCATTAAAGTGACAAAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR TCA 90 bp ACATGCCCTCCTTCCCCAAACCCCCATCCAGGTTGGCTCCCATCTGCCACTTGGAACAAGCGGCAGCTATaGGTCAGGGAACAAAGTCTG +
Preference number: 4 (lower is better)
Translates to: TCPPSPNPHPGWLPSATWNKRQL*VREQSL
Trigger: CAGACTTTGTTCCCTGACTCATAGCTGCCGCTTGTT...CCAAGTGGCAGATGGGAGCCAACCTGGATGGGGGTTTGGGGAAGGAGGGCATGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR TCA 90 bp AGATCCTGTCCAGGCTTGGCGGGAGCTCTCGCTGGCCTCATCAGAGGGCATCAACTGAACCAGGACATTTaGGGGAAAGTTGTCAGCTCC +
Preference number: 4 (lower is better)
Translates to: RSCPGLAGALAGLIRGHQLNQDI*GKVVSS
Trigger: GGAGCTGACAACTTTCCCTCAAATGTCCTGGTTCAG...TTGATGCCCTCTGATGAGGCCAGCGAGAGCTCCCGCCAAGCCTGGACAGGATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551544.5
CDS-3UTR TCA 90 bp TGGGGCATCCCTTCCCTGAGTCTGGTGGGAAGGACCCTGCTAAGGGGATCCTGGTCTGCATCATGTCTGTaGCCTGCTTTTGCTTCTGCT +
Preference number: 4 (lower is better)
Translates to: WGIPSLSLVGRTLLRGSWSASCL*PAFASA
Trigger: AGCAGAAGCAAAAGCAGGTCACAGACATGATGCAGA...CCAGGATCCCCTTAGCAGGGTCCTTCCCACCAGACTCAGGGAAGGGATGCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000547392.5
CDS-3UTR GCA 90 bp GCAGAACACACAGCTAGTACCTGGAATGGGAGCCTAGTAGGGGTCACTGCCCAGGGTCCTCACCGCAAATaGCACAGGTTTGTGCTTGGC +
Preference number: 4 (lower is better)
Translates to: AEHTASTWNGSLVGVTAQGPHRK*HRFVLG
Trigger: GCCAAGCACAAACCTGTGGCATTTGCGGTGAGGACC...CTGGGCAGTGACCCCTACTAGGCTCCCATTCCAGGTACTAGCTGTGTGTTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301050.7
ENST00000536187.6
ENST00000540990.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR GCA 90 bp GCAGAACACACAGCTAGTACCTGGAATGGGAGCCTAGTAGGGGTCACTGCCCAGGATCTCCTGGCCTTCTaGTCCTGTTTGAGCCGGATG +
Preference number: 4 (lower is better)
Translates to: AEHTASTWNGSLVGVTAQDLLAF*SCLSRM
Trigger: CATCCGGCTCAAACAGGAGCAGAAGGCCAGGAGATC...CTGGGCAGTGACCCCTACTAGGCTCCCATTCCAGGTACTAGCTGTGTGTTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301050.7
ENST00000536187.6
ENST00000540990.5
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR GCA 90 bp CCTTTTGTCACTTTAATGGGGCATCCCTTCCCTGAGTCTGGTGGGAAGGACCCTGAGGGGAGCGTCGGTTaGCAATGTCACTCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: PFVTLMGHPFPESGGKDPEGSVG*QCHSGW
Trigger: CCAGCCTGAGTGACATTGGCAACCGACGCTCCCCTC...AGGGTCCTTCCCACCAGACTCAGGGAAGGGATGCCCCATTAAAGTGACAAAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR GCA 90 bp GCCCTCCTTCCCCAAACCCCCATCCAGGTTGGCTCCCATCTGCCACTTGGCTTCTGTTCCGCCTGCTTTTaGTTCTGCTTGGCTAGAGAT +
Preference number: 4 (lower is better)
Translates to: ALLPQTPIQVGSHLPLGFCSACF*FCLARD
Trigger: ATCTCTAGCCAAGCAGAAGCAAAAGCAGGCGGAACA...GAAGCCAAGTGGCAGATGGGAGCCAACCTGGATGGGGGTTTGGGGAAGGAGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR GCA 90 bp CCAAAGCAGTCCCTTGACTGTCAGGACTTGTGCCTGCTCAGGGACCTTGTTTCTTCTGCACTTCCGCAATaGTGGAGCGGGCAGAGGAGC +
Preference number: 4 (lower is better)
Translates to: PKQSLDCQDLCLLRDLVSSALPQ*WSGQRS
Trigger: GCTCCTCTGCCCGCTCCAGCATTGCGGAAGTGCAGA...AGAAACAAGGTCCCTGAGCAGGCACAAGTCCTGACAGTCAAGGGACTGCTTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR GCA 90 bp GCAGAACACACAGCTAGTACCTGGAATGGGAGCCTAGTAGGGGTCACTGCCCAGCGCTCGATCTCACTCTaGACTTCCGCAATGCTGGAG +
Preference number: 4 (lower is better)
Translates to: AEHTASTWNGSLVGVTAQRSISL*TSAMLE
Trigger: CTCCAGCATTGCGGAAGTGCAGAGTGAGATCGAGCG...CTGGGCAGTGACCCCTACTAGGCTCCCATTCCAGGTACTAGCTGTGTGTTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301050.7
ENST00000536187.6
ENST00000540990.5
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR GCA 90 bp ACATGCCCTCCTTCCCCAAACCCCCATCCAGGTTGGCTCCCATCTGCCACTTGGTGGCCAGCTCAAATATaGGCTCGATCTCACTCTGCA +
Preference number: 4 (lower is better)
Translates to: TCPPSPNPHPGWLPSATWWPAQI*ARSHSA
Trigger: TGCAGAGTGAGATCGAGCGCATATTTGAGCTGGCCA...CCAAGTGGCAGATGGGAGCCAACCTGGATGGGGGTTTGGGGAAGGAGGGCATGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR GCA 90 bp GCCCGGATTGTTGAGCACAGATCGCTTTGCCAGGGAGAGGTCGGCTGTGACTCGTCCAACACTACTAGCTaGAGGGATTTGGCCAGCTCA +
Preference number: 4 (lower is better)
Translates to: ARIVEHRSLCQGEVGCDSSNTTS*RDLASS
Trigger: TGAGCTGGCCAAATCCCTGCAGCTAGTAGTGTTGGA...CGAGTCACAGCCGACCTCTCCCTGGCAAAGCGATCTGTGCTCAACAATCCGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000550483.5
ENST00000551544.5
CDS-3UTR GCA 90 bp CCCCAAACCCCCATCCAGGTTGGCTCCCATCTGCCACTTGGCTTCACCATGCTCATCTGTACGGTCAGGTaGTTCATCTGTGACTTCCCC +
Preference number: 4 (lower is better)
Translates to: PQTPIQVGSHLPLGFTMLICTVR*FICDFP
Trigger: GGGGAAGTCACAGATGAAGCACCTGACCGTACAGAT...GAGCATGGTGAAGCCAAGTGGCAGATGGGAGCCAACCTGGATGGGGGTTTGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR GCA 90 bp GGTGCAGAACACACAGCTAGTACCTGGAATGGGAGCCTAGTAGGGGTCACTGCCGTCCTGGTAGGCATCTaGATAGTCCTCCTCCAGGTG +
Preference number: 4 (lower is better)
Translates to: GAEHTASTWNGSLVGVTAVLVGI*IVLLQV
Trigger: CACCTGGAGGAGGACTATGCAGATGCCTACCAGGAC...GGCAGTGACCCCTACTAGGCTCCCATTCCAGGTACTAGCTGTGTGTTCTGCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301050.7
ENST00000536187.6
ENST00000540990.5
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR GCA 90 bp GACCTTGTTTCTTCCTCATGCCATGGTGCCCACACCCCACCCTTTTGTCACTTTCAAGGCCGGTTGCGCTaGCAGTTCCGGTCACTGTGG +
Preference number: 4 (lower is better)
Translates to: DLVSSSCHGAHTPPFCHFQGRLR*QFRSLW
Trigger: CCACAGTGACCGGAACTGGCAGCGCAACCGGCCTTG...AAAGTGACAAAAGGGTGGGGTGTGGGCACCATGGCATGAGGAAGAAACAAGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR GCA 90 bp GACCTTGTTTCTTCCTCATGCCATGGTGCCCACACCCCACCCTTTTGTCACTTTCCTAGTAGGGGTCACTaGCCAGGAGGTGAGGGGGTC +
Preference number: 4 (lower is better)
Translates to: DLVSSSCHGAHTPPFCHFPSRGH*PGGEGV
Trigger: GACCCCCTCACCTCCTGGGCAGTGACCCCTACTAGG...AAAGTGACAAAAGGGTGGGGTGTGGGCACCATGGCATGAGGAAGAAACAAGGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR GCA 90 bp TTAATGGGGCATCCCTTCCCTGAGTCTGGTGGGAAGGACCCTGCTAAGGGGATCTTCCTCATGCCATGGTaGCCACACCCCACCCTTTTG +
Preference number: 4 (lower is better)
Translates to: LMGHPFPESGGKDPAKGIFLMPW*PHPTLL
Trigger: CAAAAGGGTGGGGTGTGGGCACCATGGCATGAGGAA...GATCCCCTTAGCAGGGTCCTTCCCACCAGACTCAGGGAAGGGATGCCCCATTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR GCA 90 bp GGTGCAGAACACACAGCTAGTACCTGGAATGGGAGCCTAGTAGGGGTCACTGCCTTCCTCATGCCATGGTaGCCACACCCCACCCTTTTG +
Preference number: 4 (lower is better)
Translates to: GAEHTASTWNGSLVGVTAFLMPW*PHPTLL
Trigger: CAAAAGGGTGGGGTGTGGGCACCATGGCATGAGGAA...GGCAGTGACCCCTACTAGGCTCCCATTCCAGGTACTAGCTGTGTGTTCTGCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR GCA 90 bp CCCCAAACCCCCATCCAGGTTGGCTCCCATCTGCCACTTGGCTTCACCATGCTCGTCAGGACTTGTGCCTaGTCAGGGACCTTGTTTCTT +
Preference number: 4 (lower is better)
Translates to: PQTPIQVGSHLPLGFTMLVRTCA*SGTLFL
Trigger: AAGAAACAAGGTCCCTGAGCAGGCACAAGTCCTGAC...GAGCATGGTGAAGCCAAGTGGCAGATGGGAGCCAACCTGGATGGGGGTTTGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR GCA 90 bp CATAAGGCAAGAGTAGCCGGGGAGACAGGTCCTCTGTGCCCTGTCTCTCCCCATAGTCTTGGATGTGGCTaGCACACCCCAGCAAACAGA +
Preference number: 4 (lower is better)
Translates to: HKARVAGETGPLCPVSPHSLGCG*HTPANR
Trigger: TCTGTTTGCTGGGGTGTGGCAGCCACATCCAAGACT...ATGGGGAGAGACAGGGCACAGAGGACCTGTCTCCCCGGCTACTCTTGCCTTATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR GCA 90 bp CATAAGGCAAGAGTAGCCGGGGAGACAGGTCCTCTGTGCCCTGTCTCTCCCCATGGGGCTTGTGGAGCATaGTCTGTAGGTCACACACTA +
Preference number: 4 (lower is better)
Translates to: HKARVAGETGPLCPVSPHGACGA*SVGHTL
Trigger: TAGTGTGTGACCTACAGAGCATGCTCCACAAGCCCC...ATGGGGAGAGACAGGGCACAGAGGACCTGTCTCCCCGGCTACTCTTGCCTTATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000550190.1
ENST00000551544.5
CDS-3UTR GCA 90 bp CTGAGTCTGGTGGGAAGGACCCTGCTAAGGGGATCCTGGCCTGAGGGCACTGCCTCTGTGACCTGCTTTTaGTTCTGCTTGGCTAGAGAT +
Preference number: 4 (lower is better)
Translates to: LSLVGRTLLRGSWPEGTASVTCF*FCLARD
Trigger: ATCTCTAGCCAAGCAGAAGCAAAAGCAGGTCACAGA...GGCAGTGCCCTCAGGCCAGGATCCCCTTAGCAGGGTCCTTCCCACCAGACTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547392.5
CDS-3UTR CCA 90 bp GGTGCAGAACACACAGCTAGTACCTGGAATGGGAGCCTAGTAGGGGTCACTGCCCCACAGGTTTGTGCTTaGCCCTTTCGAGCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: GAEHTASTWNGSLVGVTAPQVCA*PFRAAA
Trigger: AGCAGCAGCTCGAAAGGGCCAAGCACAAACCTGTGG...GGCAGTGACCCCTACTAGGCTCCCATTCCAGGTACTAGCTGTGTGTTCTGCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301050.7
ENST00000536187.6
ENST00000540990.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR CCA 90 bp GCAGAACACACAGCTAGTACCTGGAATGGGAGCCTAGTAGGGGTCACTGCCCAGCCACAGGTTTGTGCTTaGCCCTTTCGAGCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: AEHTASTWNGSLVGVTAQPQVCA*PFRAAA
Trigger: AGCAGCAGCTCGAAAGGGCCAAGCACAAACCTGTGG...CTGGGCAGTGACCCCTACTAGGCTCCCATTCCAGGTACTAGCTGTGTGTTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301050.7
ENST00000536187.6
ENST00000540990.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR CCA 90 bp CAAACCCCCATCCAGGTTGGCTCCCATCTGCCACTTGGCTTCACCATGCTCCTGCAATGTCACTCAGGCTaGAAGGGTTCCCAGATCTCC +
Preference number: 4 (lower is better)
Translates to: QTPIQVGSHLPLGFTMLLQCHSG*KGSQIS
Trigger: GGAGATCTGGGAACCCTTCCAGCCTGAGTGACATTG...CAGGAGCATGGTGAAGCCAAGTGGCAGATGGGAGCCAACCTGGATGGGGGTTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR CCA 90 bp GTTGAGCACAGATCGCTTTGCCAGGGAGAGGTCGGCTGTGACTCGGGTGATGGACAATGTCACTCAGGCTaGAAGGGTTCCCAGATCTCC +
Preference number: 4 (lower is better)
Translates to: VEHRSLCQGEVGCDSGDGQCHSG*KGSQIS
Trigger: GGAGATCTGGGAACCCTTCCAGCCTGAGTGACATTG...TCCATCACCCGAGTCACAGCCGACCTCTCCCTGGCAAAGCGATCTGTGCTCAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000550391.5
ENST00000550483.5
ENST00000551544.5
CDS-3UTR CCA 90 bp CAAACCCCCATCCAGGTTGGCTCCCATCTGCCACTTGGCTTCACCATGCTCCTGGAGCGAATGAGACGCTaGAGTACCTTTGGTGAGGAC +
Preference number: 4 (lower is better)
Translates to: QTPIQVGSHLPLGFTMLLERMRR*STFGED
Trigger: GTCCTCACCAAAGGTACTCCAGCGTCTCATTCGCTC...CAGGAGCATGGTGAAGCCAAGTGGCAGATGGGAGCCAACCTGGATGGGGGTTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR CCA 90 bp GTCACTTTAATGGGGCATCCCTTCCCTGAGTCTGGTGGGAAGGACCCTGCTAAGTCTGAAGTCCGGGGATaGCACTGGGAGGACCCAGAA +
Preference number: 4 (lower is better)
Translates to: VTLMGHPFPESGGKDPAKSEVRG*HWEDPE
Trigger: TTCTGGGTCCTCCCAGTGCCATCCCCGGACTTCAGA...CTTAGCAGGGTCCTTCCCACCAGACTCAGGGAAGGGATGCCCCATTAAAGTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR CCA 90 bp GGTGCAGAACACACAGCTAGTACCTGGAATGGGAGCCTAGTAGGGGTCACTGCCTTGTGCTCTGAGTCCTaGGCTAGAAGCCGGTCTTGG +
Preference number: 4 (lower is better)
Translates to: GAEHTASTWNGSLVGVTALCSES*ARSRSW
Trigger: CCAAGACCGGCTTCTAGCCCAGGACTCAGAGCACAA...GGCAGTGACCCCTACTAGGCTCCCATTCCAGGTACTAGCTGTGTGTTCTGCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301050.7
ENST00000536187.6
ENST00000540990.5
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR CCA 90 bp CTAACAAGCGGCAGCTATGAGTCAGGGAACAAAGTCTGGAGCCCGGTTCTCCAAGGGCAGCTTCCTGTGTaGGAGGAGAGGAAGGTGCCA +
Preference number: 4 (lower is better)
Translates to: LTSGSYESGNKVWSPVLQGQLPV*EERKVP
Trigger: TGGCACCTTCCTCTCCTCCCACACAGGAAGCTGCCC...TTGGAGAACCGGGCTCCAGACTTTGTTCCCTGACTCATAGCTGCCGCTTGTTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR CCA 90 bp GGTGCAGAACACACAGCTAGTACCTGGAATGGGAGCCTAGTAGGGGTCACTGCCTTCTTCCTCATGCCATaGTGCCCACACCCCACCCTT +
Preference number: 4 (lower is better)
Translates to: GAEHTASTWNGSLVGVTAFFLMP*CPHPTL
Trigger: AAGGGTGGGGTGTGGGCACCATGGCATGAGGAAGAA...GGCAGTGACCCCTACTAGGCTCCCATTCCAGGTACTAGCTGTGTGTTCTGCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR CCA 90 bp ATCTGTACGGTCAGGTGCTTCATCTGTGACTTCCCCCGGGAGCGAATGAGACGCGCTTCACCATGCTCCTaGTCCCTGGTCCTGTCACAT +
Preference number: 4 (lower is better)
Translates to: ICTVRCFICDFPRERMRRASPCS*SLVLSH
Trigger: ATGTGACAGGACCAGGGACCAGGAGCATGGTGAAGC...GCGTCTCATTCGCTCCCGGGGGAAGTCACAGATGAAGCACCTGACCGTACAGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000551544.5
CDS-3UTR CCA 90 bp AGCCATAAGGCAAGAGTAGCCGGGGAGACAGGTCCTCTGTGCCCTGTCTCTCCCTCAGGGAACAAAGTCTaGAGCCCGGTTCTCCAAAGA +
Preference number: 4 (lower is better)
Translates to: SHKARVAGETGPLCPVSPSGNKV*SPVLQR
Trigger: TCTTTGGAGAACCGGGCTCCAGACTTTGTTCCCTGA...GGGAGAGACAGGGCACAGAGGACCTGTCTCCCCGGCTACTCTTGCCTTATGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000550190.1
ENST00000551544.5
CDS-3UTR CCA 90 bp GCATTCATCGAAGCCAATGCTGGAGCGGGCAGAGGAGCGCTCAATGATGGTCCTAGGGCTCCCGAATGGTaGACAGGAAGGAATTGGAGG +
Preference number: 4 (lower is better)
Translates to: AFIEANAGAGRGALNDGPRAPEW*TGRNWR
Trigger: CCTCCAATTCCTTCCTGTCCACCATTCGGGAGCCCT...AGGACCATCATTGAGCGCTCCTCTGCCCGCTCCAGCATTGGCTTCGATGAATGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550483.5
CDS-3UTR TCA 90 bp AGGGAGAGGTCGGCTGTGACTCGGGTGATGGAGATCCTGCCATCAAATCTGTGTCTTTCGAGCTGCTGCTaGGCCTGGCTCTCTACTTCA +
Preference number: 4 (lower is better)
Translates to: RERSAVTRVMEILPSNLCLSSCC*AWLSTS
Trigger: TGAAGTAGAGAGCCAGGCTCAGCAGCAGCTCGAAAG...ACACAGATTTGATGGCAGGATCTCCATCACCCGAGTCACAGCCGACCTCTCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000550391.5
ENST00000551544.5
CDS-3UTR TCA 90 bp GTCACTTTAATGGGGCATCCCTTCCCTGAGTCTGGTGGGAAGGACCCTGCTAAGGTACGCCACAGTAGCTaGCATTGGTCCTCACCGCAA +
Preference number: 4 (lower is better)
Translates to: VTLMGHPFPESGGKDPAKVRHSS*HWSSPQ
Trigger: TTGCGGTGAGGACCAATGTCAGCTACTGTGGCGTAC...CTTAGCAGGGTCCTTCCCACCAGACTCAGGGAAGGGATGCCCCATTAAAGTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547392.5
ENST00000551544.5
CDS-3UTR TCA 90 bp GCCCTCCTTCCCCAAACCCCCATCCAGGTTGGCTCCCATCTGCCACTTGGCTTCTCTGCATCATGTCTGTaGCCTCATAACCTTTCAGAG +
Preference number: 4 (lower is better)
Translates to: ALLPQTPIQVGSHLPLGFSASCL*PHNLSE
Trigger: CTCTGAAAGGTTATGAGGTCACAGACATGATGCAGA...GAAGCCAAGTGGCAGATGGGAGCCAACCTGGATGGGGGTTTGGGGAAGGAGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR TCA 90 bp GGTGCAGAACACACAGCTAGTACCTGGAATGGGAGCCTAGTAGGGGTCACTGCCTCTTGCCCGGATTGTTaGGCACAGATCGCTTTGCCA +
Preference number: 4 (lower is better)
Translates to: GAEHTASTWNGSLVGVTASCPDC*AQIALP
Trigger: TGGCAAAGCGATCTGTGCTCAACAATCCGGGCAAGA...GGCAGTGACCCCTACTAGGCTCCCATTCCAGGTACTAGCTGTGTGTTCTGCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301050.7
ENST00000536187.6
ENST00000540990.5
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR TCA 90 bp GTGCCCTGTCTCTCCCCATCTAACCCTAACCTAACAAGCGGCAGCTATGAGTCAGCTGTGCTGGGTGGTTaGTGGTGTCAGCGTCCAACA +
Preference number: 4 (lower is better)
Translates to: VPCLSPSNPNLTSGSYESAVLGG*WCQRPT
Trigger: TGTTGGACGCTGACACCATCAACCACCCAGCACAGC...TGACTCATAGCTGCCGCTTGTTAGGTTAGGGTTAGATGGGGAGAGACAGGGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR TCA 90 bp CCTTTTGTCACTTTAATGGGGCATCCCTTCCCTGAGTCTGGTGGGAAGGACCCTGCTGTGCTGGGTGGTTaGTGGTGTCAGCGTCCAACA +
Preference number: 4 (lower is better)
Translates to: PFVTLMGHPFPESGGKDPAVLGG*WCQRPT
Trigger: TGTTGGACGCTGACACCATCAACCACCCAGCACAGC...AGGGTCCTTCCCACCAGACTCAGGGAAGGGATGCCCCATTAAAGTGACAAAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR TCA 90 bp GGCAGCTATGAGTCAGGGAACAAAGTCTGGAGCCCGGTTCTCCAAAGATGTATGTCCCCCGGGAGCGAATaGGACGCTGGAGTACCTTTG +
Preference number: 4 (lower is better)
Translates to: GSYESGNKVWSPVLQRCMSPGSE*DAGVPL
Trigger: CAAAGGTACTCCAGCGTCTCATTCGCTCCCGGGGGA...CATACATCTTTGGAGAACCGGGCTCCAGACTTTGTTCCCTGACTCATAGCTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR TCA 90 bp GACCTTGTTTCTTCCTCATGCCATGGTGCCCACACCCCACCCTTTTGTCACTTTTCCCCCGGGAGCGAATaGGACGCTGGAGTACCTTTG +
Preference number: 4 (lower is better)
Translates to: DLVSSSCHGAHTPPFCHFSPGSE*DAGVPL
Trigger: CAAAGGTACTCCAGCGTCTCATTCGCTCCCGGGGGA...AAAGTGACAAAAGGGTGGGGTGTGGGCACCATGGCATGAGGAAGAAACAAGGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR TCA 90 bp GACCTTGTTTCTTCCTCATGCCATGGTGCCCACACCCCACCCTTTTGTCACTTTAGCAGCTGCTGGTTCTaGAGTCCGGGGATGGCACTG +
Preference number: 4 (lower is better)
Translates to: DLVSSSCHGAHTPPFCHFSSCWF*SPGMAL
Trigger: CAGTGCCATCCCCGGACTTCAGAACCAGCAGCTGCT...AAAGTGACAAAAGGGTGGGGTGTGGGCACCATGGCATGAGGAAGAAACAAGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR TCA 90 bp GACCTTGTTTCTTCCTCATGCCATGGTGCCCACACCCCACCCTTTTGTCACTTTCAAGAGCTTCAGCTGTaGGCTCTCTCTGGCCCGAGC +
Preference number: 4 (lower is better)
Translates to: DLVSSSCHGAHTPPFCHFQELQL*ALSGPS
Trigger: GCTCGGGCCAGAGAGAGCTCACAGCTGAAGCTCTTG...AAAGTGACAAAAGGGTGGGGTGTGGGCACCATGGCATGAGGAAGAAACAAGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR TCA 90 bp CCCCAAACCCCCATCCAGGTTGGCTCCCATCTGCCACTTGGCTTCACCATGCTCGGACAAGAACAGAAATaGCAGGATGCAGGGCAAAAG +
Preference number: 4 (lower is better)
Translates to: PQTPIQVGSHLPLGFTMLGQEQK*QDAGQK
Trigger: CTTTTGCCCTGCATCCTGTCATTTCTGTTCTTGTCC...GAGCATGGTGAAGCCAAGTGGCAGATGGGAGCCAACCTGGATGGGGGTTTGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR TCA 90 bp AGCTCCAAGGGGCTGAGAAGCTGCTCCGCATTCTTGCCCCATCTTTCCAGGCACAACAAGCGGCAGCTATaGGTCAGGGAACAAAGTCTG +
Preference number: 4 (lower is better)
Translates to: SSKGLRSCSAFLPHLSRHNKRQL*VREQSL
Trigger: CAGACTTTGTTCCCTGACTCATAGCTGCCGCTTGTT...GTGCCTGGAAAGATGGGGCAAGAATGCGGAGCAGCTTCTCAGCCCCTTGGAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551544.5
CDS-3UTR TCA 90 bp GGAGGGGAGCGTCGGTTGCCAATGTCACTCAGGCTGGAAGGGTTCCCAGATCTCCACTGCTTAATGAGCTaGTTTGTCTCAGTGGGTCAG +
Preference number: 4 (lower is better)
Translates to: GGERRLPMSLRLEGFPDLHCLMS*FVSVGQ
Trigger: CTGACCCACTGAGACAAATCAGCTCATTAAGCAGTG...GAGATCTGGGAACCCTTCCAGCCTGAGTGACATTGGCAACCGACGCTCCCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551544.5
CDS-3UTR TCA 90 bp CTAACAAGCGGCAGCTATGAGTCAGGGAACAAAGTCTGGAGCCCGGTTCTCCAAACTCTCCCTGCTGTCTaGGCTCCGGGAATCACTGCT +
Preference number: 4 (lower is better)
Translates to: LTSGSYESGNKVWSPVLQTLPAV*APGITA
Trigger: AGCAGTGATTCCCGGAGCTCAGACAGCAGGGAGAGT...TTGGAGAACCGGGCTCCAGACTTTGTTCCCTGACTCATAGCTGCCGCTTGTTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551544.5
CDS-3UTR TCA 90 bp CTAACAAGCGGCAGCTATGAGTCAGGGAACAAAGTCTGGAGCCCGGTTCTCCAATCAGCTCCAAGGGGCTaGGAAGCTGCTCCGCATTCT +
Preference number: 4 (lower is better)
Translates to: LTSGSYESGNKVWSPVLQSAPRG*EAAPHS
Trigger: AGAATGCGGAGCAGCTTCTCAGCCCCTTGGAGCTGA...TTGGAGAACCGGGCTCCAGACTTTGTTCCCTGACTCATAGCTGCCGCTTGTTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551544.5
CDS-3UTR GCA 90 bp AGGGAGAGGTCGGCTGTGACTCGGGTGATGGAGATCCTGCCATCAAATCTGTGTGATCTCCTGGCCTTCTaGTCCTGTTTGAGCCGGATG +
Preference number: 4 (lower is better)
Translates to: RERSAVTRVMEILPSNLCDLLAF*SCLSRM
Trigger: CATCCGGCTCAAACAGGAGCAGAAGGCCAGGAGATC...ACACAGATTTGATGGCAGGATCTCCATCACCCGAGTCACAGCCGACCTCTCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000550391.5
ENST00000550483.5
ENST00000551544.5
CDS-3UTR GCA 90 bp AGGCCCTGGATGCCAAAGCAGTCCCTTGACTGTCAGGACTTGTGCCTGCTCAGGGGAACATGTTCCGCCTaGTTTTGCTTCTGCTTGGCT +
Preference number: 4 (lower is better)
Translates to: RPWMPKQSLDCQDLCLLRGTCSA*FCFCLA
Trigger: AGCCAAGCAGAAGCAAAAGCAGGCGGAACATGTTCC...CCTGAGCAGGCACAAGTCCTGACAGTCAAGGGACTGCTTTGGCATCCAGGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR GCA 90 bp CCTTTTGTCACTTTAATGGGGCATCCCTTCCCTGAGTCTGGTGGGAAGGACCCTGAGCACAGATCGCTTTaGCAGGGAGAGGTCGGCTGT +
Preference number: 4 (lower is better)
Translates to: PFVTLMGHPFPESGGKDPEHRSL*QGEVGC
Trigger: ACAGCCGACCTCTCCCTGGCAAAGCGATCTGTGCTC...AGGGTCCTTCCCACCAGACTCAGGGAAGGGATGCCCCATTAAAGTGACAAAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR GCA 90 bp GGGCATTCATCGAAGCCAATGCTGGAGCGGGCAGAGGAGCGCTCAATGATGGTCTGGCCAGCTCAAATATaGGCTCGATCTCACTCTGCA +
Preference number: 4 (lower is better)
Translates to: GHSSKPMLERAEERSMMVWPAQI*ARSHSA
Trigger: TGCAGAGTGAGATCGAGCGCATATTTGAGCTGGCCA...GACCATCATTGAGCGCTCCTCTGCCCGCTCCAGCATTGGCTTCGATGAATGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550483.5
CDS-3UTR GCA 90 bp TGCTCCAGTCTTGGATGTGGCTGCCACACCCCAGCAAACAGATGGGTGTGCCACTCCAACACTACTAGCTaGAGGGATTTGGCCAGCTCA +
Preference number: 4 (lower is better)
Translates to: CSSLGCGCHTPANRWVCHSNTTS*RDLASS
Trigger: TGAGCTGGCCAAATCCCTGCAGCTAGTAGTGTTGGA...GTGGCACACCCATCTGTTTGCTGGGGTGTGGCAGCCACATCCAAGACTGGAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR GCA 90 bp CGGTGGGCACTGAACCAGCTTATCATATGCCATCATCTGTACGGTCAGGTGCTTCGGTCTTGGGGGTCATaGCCGTTAGCACTAGGCAGC +
Preference number: 4 (lower is better)
Translates to: RWALNQLIICHHLYGQVLRSWGS*PLALGS
Trigger: GCTGCCTAGTGCTAACGGGCATGACCCCCAAGACCG...AAGCACCTGACCGTACAGATGATGGCATATGATAAGCTGGTTCAGTGCCCACCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000551544.5
CDS-3UTR GCA 90 bp AGGGTTCCCAGATCTCCTGGCCTTCTGCTCCTGTTTGAGCCGGATGCTCTCCAGGTCAGGACTTGTGCCTaGTCAGGGACCTTGTTTCTT +
Preference number: 4 (lower is better)
Translates to: RVPRSPGLLLLFEPDALQVRTCA*SGTLFL
Trigger: AAGAAACAAGGTCCCTGAGCAGGCACAAGTCCTGAC...CTGGAGAGCATCCGGCTCAAACAGGAGCAGAAGGCCAGGAGATCTGGGAACCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551544.5
CDS-3UTR GCA 90 bp TTAATGGGGCATCCCTTCCCTGAGTCTGGTGGGAAGGACCCTGCTAAGGGGATCGACTGTCAGGACTTGTaGCTGCTCAGGGACCTTGTT +
Preference number: 4 (lower is better)
Translates to: LMGHPFPESGGKDPAKGIDCQDL*LLRDLV
Trigger: AACAAGGTCCCTGAGCAGGCACAAGTCCTGACAGTC...GATCCCCTTAGCAGGGTCCTTCCCACCAGACTCAGGGAAGGGATGCCCCATTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR GCA 90 bp CTAACAAGCGGCAGCTATGAGTCAGGGAACAAAGTCTGGAGCCCGGTTCTCCAACACTTGGCTTCACCATaGTCCTGGTCCCTGGTCCTG +
Preference number: 4 (lower is better)
Translates to: LTSGSYESGNKVWSPVLQHLASP*SWSLVL
Trigger: CAGGACCAGGGACCAGGAGCATGGTGAAGCCAAGTG...TTGGAGAACCGGGCTCCAGACTTTGTTCCCTGACTCATAGCTGCCGCTTGTTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR GCA 90 bp TGGACAGGAAGGAATTGGAGGAAAAGGGCATTCATCGAAGCCAATGCTGGAGCGGCTCACCAGGAGCTCTaGCCACTGCTCACTCCAGCA +
Preference number: 4 (lower is better)
Translates to: WTGRNWRKRAFIEANAGAAHQEL*PLLTPA
Trigger: TGCTGGAGTGAGCAGTGGGCAGAGCTCCTGGTGAGC...CGCTCCAGCATTGGCTTCGATGAATGCCCTTTTCCTCCAATTCCTTCCTGTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550483.5
CDS-3UTR CCA 90 bp AGGGAGAGGTCGGCTGTGACTCGGGTGATGGAGATCCTGCCATCAAATCTGTGTCCACAGGTTTGTGCTTaGCCCTTTCGAGCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: RERSAVTRVMEILPSNLCPQVCA*PFRAAA
Trigger: AGCAGCAGCTCGAAAGGGCCAAGCACAAACCTGTGG...ACACAGATTTGATGGCAGGATCTCCATCACCCGAGTCACAGCCGACCTCTCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000550391.5
ENST00000551544.5
CDS-3UTR CCA 90 bp CCTTTTGTCACTTTAATGGGGCATCCCTTCCCTGAGTCTGGTGGGAAGGACCCTTCCAGAGCCCTGGACTaGGCACTCCTCATCCAGTAC +
Preference number: 4 (lower is better)
Translates to: PFVTLMGHPFPESGGKDPSRALD*ALLIQY
Trigger: GTACTGGATGAGGAGTGCCCAGTCCAGGGCTCTGGA...AGGGTCCTTCCCACCAGACTCAGGGAAGGGATGCCCCATTAAAGTGACAAAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547392.5
ENST00000551544.5
CDS-3UTR CCA 90 bp GCAGAACACACAGCTAGTACCTGGAATGGGAGCCTAGTAGGGGTCACTGCCCAGCAATGTCACTCAGGCTaGAAGGGTTCCCAGATCTCC +
Preference number: 4 (lower is better)
Translates to: AEHTASTWNGSLVGVTAQQCHSG*KGSQIS
Trigger: GGAGATCTGGGAACCCTTCCAGCCTGAGTGACATTG...CTGGGCAGTGACCCCTACTAGGCTCCCATTCCAGGTACTAGCTGTGTGTTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301050.7
ENST00000536187.6
ENST00000540990.5
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR CCA 90 bp GCATTCATCGAAGCCAATGCTGGAGCGGGCAGAGGAGCGCTCAATGATGGTCCTCAATGTCACTCAGGCTaGAAGGGTTCCCAGATCTCC +
Preference number: 4 (lower is better)
Translates to: AFIEANAGAGRGALNDGPQCHSG*KGSQIS
Trigger: GGAGATCTGGGAACCCTTCCAGCCTGAGTGACATTG...AGGACCATCATTGAGCGCTCCTCTGCCCGCTCCAGCATTGGCTTCGATGAATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550483.5
CDS-3UTR CCA 90 bp GGTGCAGAACACACAGCTAGTACCTGGAATGGGAGCCTAGTAGGGGTCACTGCCGAGCGAATGAGACGCTaGAGTACCTTTGGTGAGGAC +
Preference number: 4 (lower is better)
Translates to: GAEHTASTWNGSLVGVTAERMRR*STFGED
Trigger: GTCCTCACCAAAGGTACTCCAGCGTCTCATTCGCTC...GGCAGTGACCCCTACTAGGCTCCCATTCCAGGTACTAGCTGTGTGTTCTGCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301050.7
ENST00000536187.6
ENST00000540990.5
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR CCA 90 bp ATGATGTTTATTAGTGATGACAGTGAGGTGAGGCAGGGGCTTGTGGAGCATGCTGGGCTGGGTGGTGCGTaGCCCGCCAGTAAACCTCCA +
Preference number: 4 (lower is better)
Translates to: MMFISDDSEVRQGLVEHAGLGGA*PASKPP
Trigger: TGGAGGTTTACTGGCGGGCCACGCACCACCCAGCCC...AGCATGCTCCACAAGCCCCTGCCTCACCTCACTGTCATCACTAATAAACATCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR CCA 90 bp GTCACTTTAATGGGGCATCCCTTCCCTGAGTCTGGTGGGAAGGACCCTGCTAAGTTGTGCTCTGAGTCCTaGGCTAGAAGCCGGTCTTGG +
Preference number: 4 (lower is better)
Translates to: VTLMGHPFPESGGKDPAKLCSES*ARSRSW
Trigger: CCAAGACCGGCTTCTAGCCCAGGACTCAGAGCACAA...CTTAGCAGGGTCCTTCCCACCAGACTCAGGGAAGGGATGCCCCATTAAAGTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR CCA 90 bp CAAACCCCCATCCAGGTTGGCTCCCATCTGCCACTTGGCTTCACCATGCTCCTGCATGCTCCTGGTCCCTaGTCCTGTCACATGTTAAGA +
Preference number: 4 (lower is better)
Translates to: QTPIQVGSHLPLGFTMLLHAPGP*SCHMLR
Trigger: TCTTAACATGTGACAGGACCAGGGACCAGGAGCATG...CAGGAGCATGGTGAAGCCAAGTGGCAGATGGGAGCCAACCTGGATGGGGGTTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR CCA 90 bp CCGGTGGGCACTGAACCAGCTTATCATATGCCATCATCTGTACGGTCAGGTGCTAACCCCCATCCAGGTTaGCTCCCATCTGCCACTTGG +
Preference number: 4 (lower is better)
Translates to: PVGTEPAYHMPSSVRSGANPHPG*LPSATW
Trigger: CCAAGTGGCAGATGGGAGCCAACCTGGATGGGGGTT...AGCACCTGACCGTACAGATGATGGCATATGATAAGCTGGTTCAGTGCCCACCGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000551544.5
CDS-3UTR CCA 90 bp CAAACCCCCATCCAGGTTGGCTCCCATCTGCCACTTGGCTTCACCATGCTCCTGTCAGGGAACAAAGTCTaGAGCCCGGTTCTCCAAAGA +
Preference number: 4 (lower is better)
Translates to: QTPIQVGSHLPLGFTMLLSGNKV*SPVLQR
Trigger: TCTTTGGAGAACCGGGCTCCAGACTTTGTTCCCTGA...CAGGAGCATGGTGAAGCCAAGTGGCAGATGGGAGCCAACCTGGATGGGGGTTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR CCA 90 bp CTGCTCCAGTCTTGGATGTGGCTGCCACACCCCAGCAAACAGATGGGTGTGCCATCAGGGAACAAAGTCTaGAGCCCGGTTCTCCAAAGA +
Preference number: 4 (lower is better)
Translates to: LLQSWMWLPHPSKQMGVPSGNKV*SPVLQR
Trigger: TCTTTGGAGAACCGGGCTCCAGACTTTGTTCCCTGA...TGGCACACCCATCTGTTTGCTGGGGTGTGGCAGCCACATCCAAGACTGGAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR TCA 90 bp CATATGGGGGAACATGTTCCGCCTAGAGATGGCGGAGGGGAGCGTCGGTTGCCATCTGCATCATGTCTGTaGCCTCATAACCTTTCAGAG +
Preference number: 4 (lower is better)
Translates to: HMGEHVPPRDGGGERRLPSASCL*PHNLSE
Trigger: CTCTGAAAGGTTATGAGGTCACAGACATGATGCAGA...TGGCAACCGACGCTCCCCTCCGCCATCTCTAGGCGGAACATGTTCCCCCATATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000548874.5
CDS-3UTR TCA 90 bp CCCCAAACCCCCATCCAGGTTGGCTCCCATCTGCCACTTGGCTTCACCATGCTCCATCAAATCTGTGTTTaGGGAAGTCGAAGAGAGCCT +
Preference number: 4 (lower is better)
Translates to: PQTPIQVGSHLPLGFTMLHQICV*GSRREP
Trigger: AGGCTCTCTTCGACTTCCTCAAACACAGATTTGATG...GAGCATGGTGAAGCCAAGTGGCAGATGGGAGCCAACCTGGATGGGGGTTTGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR TCA 90 bp CCAATGCTGGAGCGGGCAGAGGAGCGCTCAATGATGGTCCTCTTGCCCGGATTGCATCAAATCTGTGTTTaGGGAAGTCGAAGAGAGCCT +
Preference number: 4 (lower is better)
Translates to: PMLERAEERSMMVLLPGLHQICV*GSRREP
Trigger: AGGCTCTCTTCGACTTCCTCAAACACAGATTTGATG...CAATCCGGGCAAGAGGACCATCATTGAGCGCTCCTCTGCCCGCTCCAGCATTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550483.5
CDS-3UTR TCA 90 bp ACATGCCCTCCTTCCCCAAACCCCCATCCAGGTTGGCTCCCATCTGCCACTTGGCATCAAATCTGTGTTTaGGGAAGTCGAAGAGAGCCT +
Preference number: 4 (lower is better)
Translates to: TCPPSPNPHPGWLPSATWHQICV*GSRREP
Trigger: AGGCTCTCTTCGACTTCCTCAAACACAGATTTGATG...CCAAGTGGCAGATGGGAGCCAACCTGGATGGGGGTTTGGGGAAGGAGGGCATGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR TCA 90 bp AGGGAGAGGTCGGCTGTGACTCGGGTGATGGAGATCCTGCCATCAAATCTGTGTTCTTGCCCGGATTGTTaGGCACAGATCGCTTTGCCA +
Preference number: 4 (lower is better)
Translates to: RERSAVTRVMEILPSNLCSCPDC*AQIALP
Trigger: TGGCAAAGCGATCTGTGCTCAACAATCCGGGCAAGA...ACACAGATTTGATGGCAGGATCTCCATCACCCGAGTCACAGCCGACCTCTCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000550483.5
ENST00000551544.5
CDS-3UTR TCA 90 bp GGCAGCTATGAGTCAGGGAACAAAGTCTGGAGCCCGGTTCTCCAAAGATGTATGCAGGTGCTTCATCTGTaGCTTCCCCCGGGAGCGAAT +
Preference number: 4 (lower is better)
Translates to: GSYESGNKVWSPVLQRCMQVLHL*LPPGAN
Trigger: ATTCGCTCCCGGGGGAAGTCACAGATGAAGCACCTG...CATACATCTTTGGAGAACCGGGCTCCAGACTTTGTTCCCTGACTCATAGCTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR TCA 90 bp CGGTGGGCACTGAACCAGCTTATCATATGCCATCATCTGTACGGTCAGGTGCTTCAGGTGCTTCATCTGTaGCTTCCCCCGGGAGCGAAT +
Preference number: 4 (lower is better)
Translates to: RWALNQLIICHHLYGQVLQVLHL*LPPGAN
Trigger: ATTCGCTCCCGGGGGAAGTCACAGATGAAGCACCTG...AAGCACCTGACCGTACAGATGATGGCATATGATAAGCTGGTTCAGTGCCCACCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000551544.5
CDS-3UTR GCA 90 bp GCAGAACACACAGCTAGTACCTGGAATGGGAGCCTAGTAGGGGTCACTGCCCAGGGAACATGTTCCGCCTaGTTTTGCTTCTGCTTGGCT +
Preference number: 4 (lower is better)
Translates to: AEHTASTWNGSLVGVTAQGTCSA*FCFCLA
Trigger: AGCCAAGCAGAAGCAAAAGCAGGCGGAACATGTTCC...CTGGGCAGTGACCCCTACTAGGCTCCCATTCCAGGTACTAGCTGTGTGTTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301050.7
ENST00000536187.6
ENST00000540990.5
ENST00000547230.5
ENST00000551544.5
CDS-3UTR GCA 90 bp GGTGCAGAACACACAGCTAGTACCTGGAATGGGAGCCTAGTAGGGGTCACTGCCGGAACATGTTCCGCCTaGTTTTGCTTCTGCTTGGCT +
Preference number: 4 (lower is better)
Translates to: GAEHTASTWNGSLVGVTAGTCSA*FCFCLA
Trigger: AGCCAAGCAGAAGCAAAAGCAGGCGGAACATGTTCC...GGCAGTGACCCCTACTAGGCTCCCATTCCAGGTACTAGCTGTGTGTTCTGCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301050.7
ENST00000536187.6
ENST00000540990.5
ENST00000547230.5
ENST00000551544.5
CDS-3UTR GCA 90 bp GAACCAGGACATTTGAGGGAAAGTTGTCAGCTCCAAGGGGCTGAGAAGCTGCTCCGCTCGATCTCACTCTaGACTTCCGCAATGCTGGAG +
Preference number: 4 (lower is better)
Translates to: EPGHLRESCQLQGAEKLLRSISL*TSAMLE
Trigger: CTCCAGCATTGCGGAAGTGCAGAGTGAGATCGAGCG...GAGCAGCTTCTCAGCCCCTTGGAGCTGACAACTTTCCCTCAAATGTCCTGGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551544.5
CDS-3UTR GCA 90 bp GCAGAACACACAGCTAGTACCTGGAATGGGAGCCTAGTAGGGGTCACTGCCCAGTCCAACACTACTAGCTaGAGGGATTTGGCCAGCTCA +
Preference number: 4 (lower is better)
Translates to: AEHTASTWNGSLVGVTAQSNTTS*RDLASS
Trigger: TGAGCTGGCCAAATCCCTGCAGCTAGTAGTGTTGGA...CTGGGCAGTGACCCCTACTAGGCTCCCATTCCAGGTACTAGCTGTGTGTTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301050.7
ENST00000536187.6
ENST00000540990.5
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR GCA 90 bp GGTGCAGAACACACAGCTAGTACCTGGAATGGGAGCCTAGTAGGGGTCACTGCCTCCAACACTACTAGCTaGAGGGATTTGGCCAGCTCA +
Preference number: 4 (lower is better)
Translates to: GAEHTASTWNGSLVGVTASNTTS*RDLASS
Trigger: TGAGCTGGCCAAATCCCTGCAGCTAGTAGTGTTGGA...GGCAGTGACCCCTACTAGGCTCCCATTCCAGGTACTAGCTGTGTGTTCTGCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301050.7
ENST00000536187.6
ENST00000540990.5
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR GCA 90 bp TTAATGGGGCATCCCTTCCCTGAGTCTGGTGGGAAGGACCCTGCTAAGGGGATCATCTGTACGGTCAGGTaGTTCATCTGTGACTTCCCC +
Preference number: 4 (lower is better)
Translates to: LMGHPFPESGGKDPAKGIICTVR*FICDFP
Trigger: GGGGAAGTCACAGATGAAGCACCTGACCGTACAGAT...GATCCCCTTAGCAGGGTCCTTCCCACCAGACTCAGGGAAGGGATGCCCCATTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR GCA 90 bp CCTTTTGTCACTTTAATGGGGCATCCCTTCCCTGAGTCTGGTGGGAAGGACCCTGTCCTGGTAGGCATCTaGATAGTCCTCCTCCAGGTG +
Preference number: 4 (lower is better)
Translates to: PFVTLMGHPFPESGGKDPVLVGI*IVLLQV
Trigger: CACCTGGAGGAGGACTATGCAGATGCCTACCAGGAC...AGGGTCCTTCCCACCAGACTCAGGGAAGGGATGCCCCATTAAAGTGACAAAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR GCA 90 bp CCAAAGCAGTCCCTTGACTGTCAGGACTTGTGCCTGCTCAGGGACCTTGTTTCTACTGGAGGCCCTGGATaGCAAAGCAGTCCCTTGACT +
Preference number: 4 (lower is better)
Translates to: PKQSLDCQDLCLLRDLVSTGGPG*QSSPLT
Trigger: AGTCAAGGGACTGCTTTGGCATCCAGGGCCTCCAGT...AGAAACAAGGTCCCTGAGCAGGCACAAGTCCTGACAGTCAAGGGACTGCTTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR GCA 90 bp CTAACAAGCGGCAGCTATGAGTCAGGGAACAAAGTCTGGAGCCCGGTTCTCCAAGTTCTCTGCTACACATaGCCTCCTTCCCCAAACCCC +
Preference number: 4 (lower is better)
Translates to: LTSGSYESGNKVWSPVLQVLCYT*PPSPNP
Trigger: GGGGTTTGGGGAAGGAGGGCATGTGTAGCAGAGAAC...TTGGAGAACCGGGCTCCAGACTTTGTTCCCTGACTCATAGCTGCCGCTTGTTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR GCA 90 bp CCTTTTGTCACTTTAATGGGGCATCCCTTCCCTGAGTCTGGTGGGAAGGACCCTGAGACAGGTCCTCTGTaGCCTGTCTCTCCCCATCTA +
Preference number: 4 (lower is better)
Translates to: PFVTLMGHPFPESGGKDPETGPL*PVSPHL
Trigger: TAGATGGGGAGAGACAGGGCACAGAGGACCTGTCTC...AGGGTCCTTCCCACCAGACTCAGGGAAGGGATGCCCCATTAAAGTGACAAAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR GCA 90 bp CCTTTTGTCACTTTAATGGGGCATCCCTTCCCTGAGTCTGGTGGGAAGGACCCTAAGGGGCTGAGAAGCTaGTCCGCATTCTTGCCCCAT +
Preference number: 4 (lower is better)
Translates to: PFVTLMGHPFPESGGKDPKGLRS*SAFLPH
Trigger: ATGGGGCAAGAATGCGGAGCAGCTTCTCAGCCCCTT...AGGGTCCTTCCCACCAGACTCAGGGAAGGGATGCCCCATTAAAGTGACAAAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000551544.5
CDS-3UTR CCA 90 bp TGCATGATGTTTATTAGTGATGACAGTGAGGTGAGGCAGGGGCTTGTGGAGCATGCACTTCCGCAATGCTaGAGCGGGCAGAGGAGCGCT +
Preference number: 4 (lower is better)
Translates to: CMMFISDDSEVRQGLVEHALPQC*SGQRSA
Trigger: AGCGCTCCTCTGCCCGCTCCAGCATTGCGGAAGTGC...ATGCTCCACAAGCCCCTGCCTCACCTCACTGTCATCACTAATAAACATCATGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR CCA 90 bp GCAGAACACACAGCTAGTACCTGGAATGGGAGCCTAGTAGGGGTCACTGCCCAGCTAGCTGCAGGGATTTaGCCAGCTCAAATATGCGCT +
Preference number: 4 (lower is better)
Translates to: AEHTASTWNGSLVGVTAQLAAGI*PAQICA
Trigger: AGCGCATATTTGAGCTGGCCAAATCCCTGCAGCTAG...CTGGGCAGTGACCCCTACTAGGCTCCCATTCCAGGTACTAGCTGTGTGTTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301050.7
ENST00000536187.6
ENST00000540990.5
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR CCA 90 bp TTGTTGAGCACAGATCGCTTTGCCAGGGAGAGGTCGGCTGTGACTCGGGTGATGCTAGCTGCAGGGATTTaGCCAGCTCAAATATGCGCT +
Preference number: 4 (lower is better)
Translates to: LLSTDRFARERSAVTRVMLAAGI*PAQICA
Trigger: AGCGCATATTTGAGCTGGCCAAATCCCTGCAGCTAG...CATCACCCGAGTCACAGCCGACCTCTCCCTGGCAAAGCGATCTGTGCTCAACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000550483.5
ENST00000551544.5
CDS-3UTR CCA 90 bp TGCATGATGTTTATTAGTGATGACAGTGAGGTGAGGCAGGGGCTTGTGGAGCATGGCGGGAGCTCTCGCTaGCCTCATCAGAGGGCATCA +
Preference number: 4 (lower is better)
Translates to: CMMFISDDSEVRQGLVEHGGSSR*PHQRAS
Trigger: TGATGCCCTCTGATGAGGCCAGCGAGAGCTCCCGCC...ATGCTCCACAAGCCCCTGCCTCACCTCACTGTCATCACTAATAAACATCATGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR CCA 90 bp GACCTTGTTTCTTCCTCATGCCATGGTGCCCACACCCCACCCTTTTGTCACTTTGCTAGAAGCCGGTCTTaGGGGTCATGCCCGTTAGCA +
Preference number: 4 (lower is better)
Translates to: DLVSSSCHGAHTPPFCHFARSRS*GSCPLA
Trigger: TGCTAACGGGCATGACCCCCAAGACCGGCTTCTAGC...AAAGTGACAAAAGGGTGGGGTGTGGGCACCATGGCATGAGGAAGAAACAAGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR CCA 90 bp CCTTTTGTCACTTTAATGGGGCATCCCTTCCCTGAGTCTGGTGGGAAGGACCCTCAGTTCCGGTCACTGTaGTTGTGCTCTGAGTCCTGG +
Preference number: 4 (lower is better)
Translates to: PFVTLMGHPFPESGGKDPQFRSL*LCSESW
Trigger: CCAGGACTCAGAGCACAACCACAGTGACCGGAACTG...AGGGTCCTTCCCACCAGACTCAGGGAAGGGATGCCCCATTAAAGTGACAAAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR CCA 90 bp CCAAAGCAGTCCCTTGACTGTCAGGACTTGTGCCTGCTCAGGGACCTTGTTTCTTTCTTCCTCATGCCATaGTGCCCACACCCCACCCTT +
Preference number: 4 (lower is better)
Translates to: PKQSLDCQDLCLLRDLVSFFLMP*CPHPTL
Trigger: AAGGGTGGGGTGTGGGCACCATGGCATGAGGAAGAA...AGAAACAAGGTCCCTGAGCAGGCACAAGTCCTGACAGTCAAGGGACTGCTTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR CCA 90 bp CCAAAGCAGTCCCTTGACTGTCAGGACTTGTGCCTGCTCAGGGACCTTGTTTCTCTCCCATCTGCCACTTaGCTTCACCATGCTCCTGGT +
Preference number: 4 (lower is better)
Translates to: PKQSLDCQDLCLLRDLVSLPSAT*LHHAPG
Trigger: ACCAGGAGCATGGTGAAGCCAAGTGGCAGATGGGAG...AGAAACAAGGTCCCTGAGCAGGCACAAGTCCTGACAGTCAAGGGACTGCTTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR TCA 90 bp TGCATGATGTTTATTAGTGATGACAGTGAGGTGAGGCAGGGGCTTGTGGAGCATCCTTCTGCTCCTGTTTaGGCCGGATGCTCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: CMMFISDDSEVRQGLVEHPSAPV*AGCSPG
Trigger: GCCTGGAGAGCATCCGGCTCAAACAGGAGCAGAAGG...ATGCTCCACAAGCCCCTGCCTCACCTCACTGTCATCACTAATAAACATCATGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR TCA 90 bp ACTGGAGGCCCTGGATGCCAAAGCAGTCCCTTGACTGTCAGGACTTGTGCCTGCTCTGCATCATGTCTGTaGCCTCATAACCTTTCAGAG +
Preference number: 4 (lower is better)
Translates to: TGGPGCQSSPLTVRTCACSASCL*PHNLSE
Trigger: CTCTGAAAGGTTATGAGGTCACAGACATGATGCAGA...GCAGGCACAAGTCCTGACAGTCAAGGGACTGCTTTGGCATCCAGGGCCTCCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR TCA 90 bp GTTGAGCACAGATCGCTTTGCCAGGGAGAGGTCGGCTGTGACTCGGGTGATGGATCTGCATCATGTCTGTaGCCTCATAACCTTTCAGAG +
Preference number: 4 (lower is better)
Translates to: VEHRSLCQGEVGCDSGDGSASCL*PHNLSE
Trigger: CTCTGAAAGGTTATGAGGTCACAGACATGATGCAGA...TCCATCACCCGAGTCACAGCCGACCTCTCCCTGGCAAAGCGATCTGTGCTCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000550391.5
ENST00000550483.5
ENST00000551544.5
CDS-3UTR TCA 90 bp GTGCCCTGTCTCTCCCCATCTAACCCTAACCTAACAAGCGGCAGCTATGAGTCATCTTGCCCGGATTGTTaGGCACAGATCGCTTTGCCA +
Preference number: 4 (lower is better)
Translates to: VPCLSPSNPNLTSGSYESSCPDC*AQIALP
Trigger: TGGCAAAGCGATCTGTGCTCAACAATCCGGGCAAGA...TGACTCATAGCTGCCGCTTGTTAGGTTAGGGTTAGATGGGGAGAGACAGGGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR TCA 90 bp AGGAATTGGAGGAAAAGGGCATTCATCGAAGCCAATGCTGGAGCGGGCAGAGGATCTTGCCCGGATTGTTaGGCACAGATCGCTTTGCCA +
Preference number: 4 (lower is better)
Translates to: RNWRKRAFIEANAGAGRGSCPDC*AQIALP
Trigger: TGGCAAAGCGATCTGTGCTCAACAATCCGGGCAAGA...TCCTCTGCCCGCTCCAGCATTGGCTTCGATGAATGCCCTTTTCCTCCAATTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550483.5
CDS-3UTR TCA 90 bp AACACTACTAGCTGCAGGGATTTGGCCAGCTCAAATATGCGCTCGATCTCACTCGCTGTGCTGGGTGGTTaGTGGTGTCAGCGTCCAACA +
Preference number: 4 (lower is better)
Translates to: NTTSCRDLASSNMRSISLAVLGG*WCQRPT
Trigger: TGTTGGACGCTGACACCATCAACCACCCAGCACAGC...GAGTGAGATCGAGCGCATATTTGAGCTGGCCAAATCCCTGCAGCTAGTAGTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000550483.5
ENST00000551544.5
CDS-3UTR TCA 90 bp TGCATGATGTTTATTAGTGATGACAGTGAGGTGAGGCAGGGGCTTGTGGAGCATCAAGAGCTTCAGCTGTaGGCTCTCTCTGGCCCGAGC +
Preference number: 4 (lower is better)
Translates to: CMMFISDDSEVRQGLVEHQELQL*ALSGPS
Trigger: GCTCGGGCCAGAGAGAGCTCACAGCTGAAGCTCTTG...ATGCTCCACAAGCCCCTGCCTCACCTCACTGTCATCACTAATAAACATCATGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR TCA 90 bp GGTGCAGAACACACAGCTAGTACCTGGAATGGGAGCCTAGTAGGGGTCACTGCCGGACAAGAACAGAAATaGCAGGATGCAGGGCAAAAG +
Preference number: 4 (lower is better)
Translates to: GAEHTASTWNGSLVGVTAGQEQK*QDAGQK
Trigger: CTTTTGCCCTGCATCCTGTCATTTCTGTTCTTGTCC...GGCAGTGACCCCTACTAGGCTCCCATTCCAGGTACTAGCTGTGTGTTCTGCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR GCA 90 bp GACCTTGTTTCTTCCTCATGCCATGGTGCCCACACCCCACCCTTTTGTCACTTTGATCTCCTGGCCTTCTaGTCCTGTTTGAGCCGGATG +
Preference number: 4 (lower is better)
Translates to: DLVSSSCHGAHTPPFCHFDLLAF*SCLSRM
Trigger: CATCCGGCTCAAACAGGAGCAGAAGGCCAGGAGATC...AAAGTGACAAAAGGGTGGGGTGTGGGCACCATGGCATGAGGAAGAAACAAGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR GCA 90 bp CCTTTTGTCACTTTAATGGGGCATCCCTTCCCTGAGTCTGGTGGGAAGGACCCTGCCTGCTTTTGCTTCTaGTTGGCTAGAGATGGCGGA +
Preference number: 4 (lower is better)
Translates to: PFVTLMGHPFPESGGKDPACFCF*LARDGG
Trigger: TCCGCCATCTCTAGCCAAGCAGAAGCAAAAGCAGGC...AGGGTCCTTCCCACCAGACTCAGGGAAGGGATGCCCCATTAAAGTGACAAAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR GCA 90 bp CCAAAGCAGTCCCTTGACTGTCAGGACTTGTGCCTGCTCAGGGACCTTGTTTCTGCCTGCTTTTGCTTCTaGTTGGCTAGAGATGGCGGA +
Preference number: 4 (lower is better)
Translates to: PKQSLDCQDLCLLRDLVSACFCF*LARDGG
Trigger: TCCGCCATCTCTAGCCAAGCAGAAGCAAAAGCAGGC...AGAAACAAGGTCCCTGAGCAGGCACAAGTCCTGACAGTCAAGGGACTGCTTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR GCA 90 bp GCAGAACACACAGCTAGTACCTGGAATGGGAGCCTAGTAGGGGTCACTGCCCAGTGTTCCGCCTGCTTTTaGTTCTGCTTGGCTAGAGAT +
Preference number: 4 (lower is better)
Translates to: AEHTASTWNGSLVGVTAQCSACF*FCLARD
Trigger: ATCTCTAGCCAAGCAGAAGCAAAAGCAGGCGGAACA...CTGGGCAGTGACCCCTACTAGGCTCCCATTCCAGGTACTAGCTGTGTGTTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301050.7
ENST00000536187.6
ENST00000540990.5
ENST00000547230.5
ENST00000551544.5
CDS-3UTR GCA 90 bp TTAATGGGGCATCCCTTCCCTGAGTCTGGTGGGAAGGACCCTGCTAAGGGGATCTGTTCCGCCTGCTTTTaGTTCTGCTTGGCTAGAGAT +
Preference number: 4 (lower is better)
Translates to: LMGHPFPESGGKDPAKGICSACF*FCLARD
Trigger: ATCTCTAGCCAAGCAGAAGCAAAAGCAGGCGGAACA...GATCCCCTTAGCAGGGTCCTTCCCACCAGACTCAGGGAAGGGATGCCCCATTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR GCA 90 bp GACCTTGTTTCTTCCTCATGCCATGGTGCCCACACCCCACCCTTTTGTCACTTTCGCTCGATCTCACTCTaGACTTCCGCAATGCTGGAG +
Preference number: 4 (lower is better)
Translates to: DLVSSSCHGAHTPPFCHFRSISL*TSAMLE
Trigger: CTCCAGCATTGCGGAAGTGCAGAGTGAGATCGAGCG...AAAGTGACAAAAGGGTGGGGTGTGGGCACCATGGCATGAGGAAGAAACAAGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR GCA 90 bp GTCACTTTAATGGGGCATCCCTTCCCTGAGTCTGGTGGGAAGGACCCTGCTAAGATCTGTACGGTCAGGTaGTTCATCTGTGACTTCCCC +
Preference number: 4 (lower is better)
Translates to: VTLMGHPFPESGGKDPAKICTVR*FICDFP
Trigger: GGGGAAGTCACAGATGAAGCACCTGACCGTACAGAT...CTTAGCAGGGTCCTTCCCACCAGACTCAGGGAAGGGATGCCCCATTAAAGTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR GCA 90 bp GACCTTGTTTCTTCCTCATGCCATGGTGCCCACACCCCACCCTTTTGTCACTTTGTCCTGGTAGGCATCTaGATAGTCCTCCTCCAGGTG +
Preference number: 4 (lower is better)
Translates to: DLVSSSCHGAHTPPFCHFVLVGI*IVLLQV
Trigger: CACCTGGAGGAGGACTATGCAGATGCCTACCAGGAC...AAAGTGACAAAAGGGTGGGGTGTGGGCACCATGGCATGAGGAAGAAACAAGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR GCA 90 bp CCAAAGCAGTCCCTTGACTGTCAGGACTTGTGCCTGCTCAGGGACCTTGTTTCTAGTCTTGGATGTGGCTaGCACACCCCAGCAAACAGA +
Preference number: 4 (lower is better)
Translates to: PKQSLDCQDLCLLRDLVSSLGCG*HTPANR
Trigger: TCTGTTTGCTGGGGTGTGGCAGCCACATCCAAGACT...AGAAACAAGGTCCCTGAGCAGGCACAAGTCCTGACAGTCAAGGGACTGCTTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR GCA 90 bp ATGATGTTTATTAGTGATGACAGTGAGGTGAGGCAGGGGCTTGTGGAGCATGCTCGAGCGTGGCCAGCCTaGTGCTCCAGTCTTGGATGT +
Preference number: 4 (lower is better)
Translates to: MMFISDDSEVRQGLVEHARAWPA*CSSLGC
Trigger: ACATCCAAGACTGGAGCAGCAGGCTGGCCACGCTCG...AGCATGCTCCACAAGCCCCTGCCTCACCTCACTGTCATCACTAATAAACATCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR GCA 90 bp CCTTTTGTCACTTTAATGGGGCATCCCTTCCCTGAGTCTGGTGGGAAGGACCCTGGGGCTTGTGGAGCATaGTCTGTAGGTCACACACTA +
Preference number: 4 (lower is better)
Translates to: PFVTLMGHPFPESGGKDPGACGA*SVGHTL
Trigger: TAGTGTGTGACCTACAGAGCATGCTCCACAAGCCCC...AGGGTCCTTCCCACCAGACTCAGGGAAGGGATGCCCCATTAAAGTGACAAAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR GCA 90 bp TGGACAGGAAGGAATTGGAGGAAAAGGGCATTCATCGAAGCCAATGCTGGAGCGCGCTCGATCTCACTCTaGACTTCCGCTATGGAGGGA +
Preference number: 4 (lower is better)
Translates to: WTGRNWRKRAFIEANAGARSISL*TSAMEG
Trigger: TCCCTCCATAGCGGAAGTGCAGAGTGAGATCGAGCG...CGCTCCAGCATTGGCTTCGATGAATGCCCTTTTCCTCCAATTCCTTCCTGTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550483.5
CDS-3UTR CCA 90 bp CCTTTTGTCACTTTAATGGGGCATCCCTTCCCTGAGTCTGGTGGGAAGGACCCTCAATGTCACTCAGGCTaGAAGGGTTCCCAGATCTCC +
Preference number: 4 (lower is better)
Translates to: PFVTLMGHPFPESGGKDPQCHSG*KGSQIS
Trigger: GGAGATCTGGGAACCCTTCCAGCCTGAGTGACATTG...AGGGTCCTTCCCACCAGACTCAGGGAAGGGATGCCCCATTAAAGTGACAAAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR CCA 90 bp GACCTTGTTTCTTCCTCATGCCATGGTGCCCACACCCCACCCTTTTGTCACTTTTTGTGCTCTGAGTCCTaGGCTAGAAGCCGGTCTTGG +
Preference number: 4 (lower is better)
Translates to: DLVSSSCHGAHTPPFCHFLCSES*ARSRSW
Trigger: CCAAGACCGGCTTCTAGCCCAGGACTCAGAGCACAA...AAAGTGACAAAAGGGTGGGGTGTGGGCACCATGGCATGAGGAAGAAACAAGGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR CCA 90 bp CGGTGGGCACTGAACCAGCTTATCATATGCCATCATCTGTACGGTCAGGTGCTTTTCTTCCTCATGCCATaGTGCCCACACCCCACCCTT +
Preference number: 4 (lower is better)
Translates to: RWALNQLIICHHLYGQVLFFLMP*CPHPTL
Trigger: AAGGGTGGGGTGTGGGCACCATGGCATGAGGAAGAA...AAGCACCTGACCGTACAGATGATGGCATATGATAAGCTGGTTCAGTGCCCACCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551544.5
CDS-3UTR CCA 90 bp GACCTTGTTTCTTCCTCATGCCATGGTGCCCACACCCCACCCTTTTGTCACTTTCTCCCATCTGCCACTTaGCTTCACCATGCTCCTGGT +
Preference number: 4 (lower is better)
Translates to: DLVSSSCHGAHTPPFCHFLPSAT*LHHAPG
Trigger: ACCAGGAGCATGGTGAAGCCAAGTGGCAGATGGGAG...AAAGTGACAAAAGGGTGGGGTGTGGGCACCATGGCATGAGGAAGAAACAAGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR CCA 90 bp AGGAATTGGAGGAAAAGGGCATTCATCGAAGCCAATGCTGGAGCGGGCAGAGGATTGAGGGCTCCCGAATaGTGGACAGGAAGGAATTGG +
Preference number: 4 (lower is better)
Translates to: RNWRKRAFIEANAGAGRGLRAPE*WTGRNW
Trigger: CCAATTCCTTCCTGTCCACCATTCGGGAGCCCTCAA...TCCTCTGCCCGCTCCAGCATTGGCTTCGATGAATGCCCTTTTCCTCCAATTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550483.5
CDS-3UTR CCA 90 bp GTCACTTTAATGGGGCATCCCTTCCCTGAGTCTGGTGGGAAGGACCCTGCTAAGCATTGCTGTACTTCTTaGCCCTTTCGAGCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: VTLMGHPFPESGGKDPAKHCCTS*PFRAAA
Trigger: AGCAGCAGCTCGAAAGGGCCAAGAAGTACAGCAATG...CTTAGCAGGGTCCTTCCCACCAGACTCAGGGAAGGGATGCCCCATTAAAGTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547230.5
CDS-3UTR TCA 90 bp AACACTACTAGCTGCAGGGATTTGGCCAGCTCAAATATGCGCTCGATCTCACTCCTTTGGCCTCAAAGTTaGCTCCAGAGCCCTGGACTG +
Preference number: 4 (lower is better)
Translates to: NTTSCRDLASSNMRSISLLWPQS*LQSPGL
Trigger: CAGTCCAGGGCTCTGGAGTCAACTTTGAGGCCAAAG...GAGTGAGATCGAGCGCATATTTGAGCTGGCCAAATCCCTGCAGCTAGTAGTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551544.5
CDS-3UTR TCA 90 bp GCAGAACACACAGCTAGTACCTGGAATGGGAGCCTAGTAGGGGTCACTGCCCAGCATCAAATCTGTGTTTaGGGAAGTCGAAGAGAGCCT +
Preference number: 4 (lower is better)
Translates to: AEHTASTWNGSLVGVTAQHQICV*GSRREP
Trigger: AGGCTCTCTTCGACTTCCTCAAACACAGATTTGATG...CTGGGCAGTGACCCCTACTAGGCTCCCATTCCAGGTACTAGCTGTGTGTTCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301050.7
ENST00000536187.6
ENST00000540990.5
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR TCA 90 bp GACCTTGTTTCTTCCTCATGCCATGGTGCCCACACCCCACCCTTTTGTCACTTTTCTTGCCCGGATTGTTaGGCACAGATCGCTTTGCCA +
Preference number: 4 (lower is better)
Translates to: DLVSSSCHGAHTPPFCHFSCPDC*AQIALP
Trigger: TGGCAAAGCGATCTGTGCTCAACAATCCGGGCAAGA...AAAGTGACAAAAGGGTGGGGTGTGGGCACCATGGCATGAGGAAGAAACAAGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR TCA 90 bp AGCCATAAGGCAAGAGTAGCCGGGGAGACAGGTCCTCTGTGCCCTGTCTCTCCCTTCTCCAAAGATGTATaGGGGACAAGAACAGAAATG +
Preference number: 4 (lower is better)
Translates to: SHKARVAGETGPLCPVSPFSKDV*GTRTEM
Trigger: CATTTCTGTTCTTGTCCCTCATACATCTTTGGAGAA...GGGAGAGACAGGGCACAGAGGACCTGTCTCCCCGGCTACTCTTGCCTTATGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000550190.1
ENST00000551544.5
CDS-3UTR GCA 90 bp GTGCCCTGTCTCTCCCCATCTAACCCTAACCTAACAAGCGGCAGCTATGAGTCATGGCCAGCTCAAATATaGGCTCGATCTCACTCTGCA +
Preference number: 4 (lower is better)
Translates to: VPCLSPSNPNLTSGSYESWPAQI*ARSHSA
Trigger: TGCAGAGTGAGATCGAGCGCATATTTGAGCTGGCCA...TGACTCATAGCTGCCGCTTGTTAGGTTAGGGTTAGATGGGGAGAGACAGGGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR GCA 90 bp CCTTTTGTCACTTTAATGGGGCATCCCTTCCCTGAGTCTGGTGGGAAGGACCCTTCCAACACTACTAGCTaGAGGGATTTGGCCAGCTCA +
Preference number: 4 (lower is better)
Translates to: PFVTLMGHPFPESGGKDPSNTTS*RDLASS
Trigger: TGAGCTGGCCAAATCCCTGCAGCTAGTAGTGTTGGA...AGGGTCCTTCCCACCAGACTCAGGGAAGGGATGCCCCATTAAAGTGACAAAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR GCA 90 bp TGCATGATGTTTATTAGTGATGACAGTGAGGTGAGGCAGGGGCTTGTGGAGCATCACTTGGCTTCACCATaGTCCTGGTCCCTGGTCCTG +
Preference number: 4 (lower is better)
Translates to: CMMFISDDSEVRQGLVEHHLASP*SWSLVL
Trigger: CAGGACCAGGGACCAGGAGCATGGTGAAGCCAAGTG...ATGCTCCACAAGCCCCTGCCTCACCTCACTGTCATCACTAATAAACATCATGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR CCA 90 bp ATGATGTTTATTAGTGATGACAGTGAGGTGAGGCAGGGGCTTGTGGAGCATGCTTCCAGAGCCCTGGACTaGGCACTCCTCATCCAGTAC +
Preference number: 4 (lower is better)
Translates to: MMFISDDSEVRQGLVEHASRALD*ALLIQY
Trigger: GTACTGGATGAGGAGTGCCCAGTCCAGGGCTCTGGA...AGCATGCTCCACAAGCCCCTGCCTCACCTCACTGTCATCACTAATAAACATCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000550190.1
ENST00000551544.5
CDS-3UTR CCA 90 bp ATGATGTTTATTAGTGATGACAGTGAGGTGAGGCAGGGGCTTGTGGAGCATGCTTTGACTCCAGAGCCCTaGACTGGGCACTCCTCATCC +
Preference number: 4 (lower is better)
Translates to: MMFISDDSEVRQGLVEHALTPEP*TGHSSS
Trigger: GGATGAGGAGTGCCCAGTCCAGGGCTCTGGAGTCAA...AGCATGCTCCACAAGCCCCTGCCTCACCTCACTGTCATCACTAATAAACATCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000550190.1
ENST00000551544.5
CDS-3UTR CCA 90 bp GGCAGCTATGAGTCAGGGAACAAAGTCTGGAGCCCGGTTCTCCAAAGATGTATGCAATGTCACTCAGGCTaGAAGGGTTCCCAGATCTCC +
Preference number: 4 (lower is better)
Translates to: GSYESGNKVWSPVLQRCMQCHSG*KGSQIS
Trigger: GGAGATCTGGGAACCCTTCCAGCCTGAGTGACATTG...CATACATCTTTGGAGAACCGGGCTCCAGACTTTGTTCCCTGACTCATAGCTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR CCA 90 bp ATGATGTTTATTAGTGATGACAGTGAGGTGAGGCAGGGGCTTGTGGAGCATGCTTCTGAAGTCCGGGGATaGCACTGGGAGGACCCAGAA +
Preference number: 4 (lower is better)
Translates to: MMFISDDSEVRQGLVEHASEVRG*HWEDPE
Trigger: TTCTGGGTCCTCCCAGTGCCATCCCCGGACTTCAGA...AGCATGCTCCACAAGCCCCTGCCTCACCTCACTGTCATCACTAATAAACATCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR CCA 90 bp ATGATGTTTATTAGTGATGACAGTGAGGTGAGGCAGGGGCTTGTGGAGCATGCTGCTAGAAGCCGGTCTTaGGGGTCATGCCCGTTAGCA +
Preference number: 4 (lower is better)
Translates to: MMFISDDSEVRQGLVEHAARSRS*GSCPLA
Trigger: TGCTAACGGGCATGACCCCCAAGACCGGCTTCTAGC...AGCATGCTCCACAAGCCCCTGCCTCACCTCACTGTCATCACTAATAAACATCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR CCA 90 bp CCAAAGCAGTCCCTTGACTGTCAGGACTTGTGCCTGCTCAGGGACCTTGTTTCTCATGCTCCTGGTCCCTaGTCCTGTCACATGTTAAGA +
Preference number: 4 (lower is better)
Translates to: PKQSLDCQDLCLLRDLVSHAPGP*SCHMLR
Trigger: TCTTAACATGTGACAGGACCAGGGACCAGGAGCATG...AGAAACAAGGTCCCTGAGCAGGCACAAGTCCTGACAGTCAAGGGACTGCTTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR TCA 90 bp ATGATGTTTATTAGTGATGACAGTGAGGTGAGGCAGGGGCTTGTGGAGCATGCTCTTTCGAGCTGCTGCTaGGCCTGGCTCTCTACTTCA +
Preference number: 4 (lower is better)
Translates to: MMFISDDSEVRQGLVEHALSSCC*AWLSTS
Trigger: TGAAGTAGAGAGCCAGGCTCAGCAGCAGCTCGAAAG...AGCATGCTCCACAAGCCCCTGCCTCACCTCACTGTCATCACTAATAAACATCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR TCA 90 bp TGCATGATGTTTATTAGTGATGACAGTGAGGTGAGGCAGGGGCTTGTGGAGCATTGCAGGGCAAAAGAATaGGAAAGGCAAGGAGGCCCC +
Preference number: 4 (lower is better)
Translates to: CMMFISDDSEVRQGLVEHCRAKE*ERQGGP
Trigger: GGGGCCTCCTTGCCTTTCTCATTCTTTTGCCCTGCA...ATGCTCCACAAGCCCCTGCCTCACCTCACTGTCATCACTAATAAACATCATGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000550190.1
ENST00000551544.5
CDS-3UTR TCA 90 bp TGCTCCAGTCTTGGATGTGGCTGCCACACCCCAGCAAACAGATGGGTGTGCCACTTCTCCAAAGATGTATaGGGGACAAGAACAGAAATG +
Preference number: 4 (lower is better)
Translates to: CSSLGCGCHTPANRWVCHFSKDV*GTRTEM
Trigger: CATTTCTGTTCTTGTCCCTCATACATCTTTGGAGAA...GTGGCACACCCATCTGTTTGCTGGGGTGTGGCAGCCACATCCAAGACTGGAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR GCA 90 bp ATGATGTTTATTAGTGATGACAGTGAGGTGAGGCAGGGGCTTGTGGAGCATGCTGATCTCCTGGCCTTCTaGTCCTGTTTGAGCCGGATG +
Preference number: 4 (lower is better)
Translates to: MMFISDDSEVRQGLVEHADLLAF*SCLSRM
Trigger: CATCCGGCTCAAACAGGAGCAGAAGGCCAGGAGATC...AGCATGCTCCACAAGCCCCTGCCTCACCTCACTGTCATCACTAATAAACATCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR GCA 90 bp CCAAAGCAGTCCCTTGACTGTCAGGACTTGTGCCTGCTCAGGGACCTTGTTTCTTGTTCCGCCTGCTTTTaGTTCTGCTTGGCTAGAGAT +
Preference number: 4 (lower is better)
Translates to: PKQSLDCQDLCLLRDLVSCSACF*FCLARD
Trigger: ATCTCTAGCCAAGCAGAAGCAAAAGCAGGCGGAACA...AGAAACAAGGTCCCTGAGCAGGCACAAGTCCTGACAGTCAAGGGACTGCTTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR GCA 90 bp GGCAGCTATGAGTCAGGGAACAAAGTCTGGAGCCCGGTTCTCCAAAGATGTATGTCCAACACTACTAGCTaGAGGGATTTGGCCAGCTCA +
Preference number: 4 (lower is better)
Translates to: GSYESGNKVWSPVLQRCMSNTTS*RDLASS
Trigger: TGAGCTGGCCAAATCCCTGCAGCTAGTAGTGTTGGA...CATACATCTTTGGAGAACCGGGCTCCAGACTTTGTTCCCTGACTCATAGCTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR GCA 90 bp GACCTTGTTTCTTCCTCATGCCATGGTGCCCACACCCCACCCTTTTGTCACTTTATCTGTACGGTCAGGTaGTTCATCTGTGACTTCCCC +
Preference number: 4 (lower is better)
Translates to: DLVSSSCHGAHTPPFCHFICTVR*FICDFP
Trigger: GGGGAAGTCACAGATGAAGCACCTGACCGTACAGAT...AAAGTGACAAAAGGGTGGGGTGTGGGCACCATGGCATGAGGAAGAAACAAGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR GCA 90 bp GGCAGCTATGAGTCAGGGAACAAAGTCTGGAGCCCGGTTCTCCAAAGATGTATGGTCAGGACTTGTGCCTaGTCAGGGACCTTGTTTCTT +
Preference number: 4 (lower is better)
Translates to: GSYESGNKVWSPVLQRCMVRTCA*SGTLFL
Trigger: AAGAAACAAGGTCCCTGAGCAGGCACAAGTCCTGAC...CATACATCTTTGGAGAACCGGGCTCCAGACTTTGTTCCCTGACTCATAGCTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR GCA 90 bp ATGATGTTTATTAGTGATGACAGTGAGGTGAGGCAGGGGCTTGTGGAGCATGCTGAGACAGGTCCTCTGTaGCCTGTCTCTCCCCATCTA +
Preference number: 4 (lower is better)
Translates to: MMFISDDSEVRQGLVEHAETGPL*PVSPHL
Trigger: TAGATGGGGAGAGACAGGGCACAGAGGACCTGTCTC...AGCATGCTCCACAAGCCCCTGCCTCACCTCACTGTCATCACTAATAAACATCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000550190.1
ENST00000551544.5
CDS-3UTR GCA 90 bp GACCTTGTTTCTTCCTCATGCCATGGTGCCCACACCCCACCCTTTTGTCACTTTACCTGCTTTTGCTTCTaGTTGGCTAGAGATGGCGGA +
Preference number: 4 (lower is better)
Translates to: DLVSSSCHGAHTPPFCHFTCFCF*LARDGG
Trigger: TCCGCCATCTCTAGCCAAGCAGAAGCAAAAGCAGGT...AAAGTGACAAAAGGGTGGGGTGTGGGCACCATGGCATGAGGAAGAAACAAGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000547392.5
CDS-3UTR GCA 90 bp CATATGGGGGAACATGTTCCGCCTAGAGATGGCGGAGGGGAGCGTCGGTTGCCAATCTCCTCTTTAATGTaGAGAAAATCTTTGGCCTCA +
Preference number: 4 (lower is better)
Translates to: HMGEHVPPRDGGGERRLPISSLM*RKSLAS
Trigger: TGAGGCCAAAGATTTTCTGCACATTAAAGAGGAGAT...TGGCAACCGACGCTCCCCTCCGCCATCTCTAGGCGGAACATGTTCCCCCATATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000548874.5
CDS-3UTR CCA 90 bp ATGATGTTTATTAGTGATGACAGTGAGGTGAGGCAGGGGCTTGTGGAGCATGCTCCACAGGTTTGTGCTTaGCCCTTTCGAGCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: MMFISDDSEVRQGLVEHAPQVCA*PFRAAA
Trigger: AGCAGCAGCTCGAAAGGGCCAAGCACAAACCTGTGG...AGCATGCTCCACAAGCCCCTGCCTCACCTCACTGTCATCACTAATAAACATCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301050.7
ENST00000551544.5
CDS-3UTR CCA 90 bp GGCAGCTATGAGTCAGGGAACAAAGTCTGGAGCCCGGTTCTCCAAAGATGTATGCTAGCTGCAGGGATTTaGCCAGCTCAAATATGCGCT +
Preference number: 4 (lower is better)
Translates to: GSYESGNKVWSPVLQRCMLAAGI*PAQICA
Trigger: AGCGCATATTTGAGCTGGCCAAATCCCTGCAGCTAG...CATACATCTTTGGAGAACCGGGCTCCAGACTTTGTTCCCTGACTCATAGCTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR TCA 90 bp GAACCAGGACATTTGAGGGAAAGTTGTCAGCTCCAAGGGGCTGAGAAGCTGCTCTCTGCATCATGTCTGTaGCCTCATAACCTTTCAGAG +
Preference number: 4 (lower is better)
Translates to: EPGHLRESCQLQGAEKLLSASCL*PHNLSE
Trigger: CTCTGAAAGGTTATGAGGTCACAGACATGATGCAGA...GAGCAGCTTCTCAGCCCCTTGGAGCTGACAACTTTCCCTCAAATGTCCTGGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551544.5
CDS-3UTR TCA 90 bp CCTTTTGTCACTTTAATGGGGCATCCCTTCCCTGAGTCTGGTGGGAAGGACCCTCATCAAATCTGTGTTTaGGGAAGTCGAAGAGAGCCT +
Preference number: 4 (lower is better)
Translates to: PFVTLMGHPFPESGGKDPHQICV*GSRREP
Trigger: AGGCTCTCTTCGACTTCCTCAAACACAGATTTGATG...AGGGTCCTTCCCACCAGACTCAGGGAAGGGATGCCCCATTAAAGTGACAAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR CCA 90 bp ATGATGTTTATTAGTGATGACAGTGAGGTGAGGCAGGGGCTTGTGGAGCATGCTGAGCGAATGAGACGCTaGAGTACCTTTGGTGAGGAC +
Preference number: 4 (lower is better)
Translates to: MMFISDDSEVRQGLVEHAERMRR*STFGED
Trigger: GTCCTCACCAAAGGTACTCCAGCGTCTCATTCGCTC...AGCATGCTCCACAAGCCCCTGCCTCACCTCACTGTCATCACTAATAAACATCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR TCA 90 bp TGCATGATGTTTATTAGTGATGACAGTGAGGTGAGGCAGGGGCTTGTGGAGCATAACAAGCGGCAGCTATaGGTCAGGGAACAAAGTCTG +
Preference number: 4 (lower is better)
Translates to: CMMFISDDSEVRQGLVEHNKRQL*VREQSL
Trigger: CAGACTTTGTTCCCTGACTCATAGCTGCCGCTTGTT...ATGCTCCACAAGCCCCTGCCTCACCTCACTGTCATCACTAATAAACATCATGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000550190.1
ENST00000551544.5
CDS-3UTR CCA 90 bp TGGACAGGAAGGAATTGGAGGAAAAGGGCATTCATCGAAGCCAATGCTGGAGCGTGGACAGGAAGGAATTaGAGGAAAAGGGCATTCATC +
Preference number: 4 (lower is better)
Translates to: WTGRNWRKRAFIEANAGAWTGRN*RKRAFI
Trigger: GATGAATGCCCTTTTCCTCCAATTCCTTCCTGTCCA...CGCTCCAGCATTGGCTTCGATGAATGCCCTTTTCCTCCAATTCCTTCCTGTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550483.5
CDS-3UTR TCA 90 bp AACACTACTAGCTGCAGGGATTTGGCCAGCTCAAATATGCGCTCGATCTCACTCTCTGCATCATGTCTGTaGCCTCATAACCTTTCAGAG +
Preference number: 4 (lower is better)
Translates to: NTTSCRDLASSNMRSISLSASCL*PHNLSE
Trigger: CTCTGAAAGGTTATGAGGTCACAGACATGATGCAGA...GAGTGAGATCGAGCGCATATTTGAGCTGGCCAAATCCCTGCAGCTAGTAGTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000550483.5
ENST00000551544.5
CDS-3UTR TCA 90 bp ATGATGTTTATTAGTGATGACAGTGAGGTGAGGCAGGGGCTTGTGGAGCATGCTGGACAAGAACAGAAATaGCAGGATGCAGGGCAAAAG +
Preference number: 4 (lower is better)
Translates to: MMFISDDSEVRQGLVEHAGQEQK*QDAGQK
Trigger: CTTTTGCCCTGCATCCTGTCATTTCTGTTCTTGTCC...AGCATGCTCCACAAGCCCCTGCCTCACCTCACTGTCATCACTAATAAACATCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000550190.1
ENST00000551544.5
CDS-3UTR TCA 90 bp CCTTTTGTCACTTTAATGGGGCATCCCTTCCCTGAGTCTGGTGGGAAGGACCCTTTCTCCAAAGATGTATaGGGGACAAGAACAGAAATG +
Preference number: 4 (lower is better)
Translates to: PFVTLMGHPFPESGGKDPFSKDV*GTRTEM
Trigger: CATTTCTGTTCTTGTCCCTCATACATCTTTGGAGAA...AGGGTCCTTCCCACCAGACTCAGGGAAGGGATGCCCCATTAAAGTGACAAAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR TCA 90 bp GAACCAGGACATTTGAGGGAAAGTTGTCAGCTCCAAGGGGCTGAGAAGCTGCTCTTCTCCAAAGATGTATaGGGGACAAGAACAGAAATG +
Preference number: 4 (lower is better)
Translates to: EPGHLRESCQLQGAEKLLFSKDV*GTRTEM
Trigger: CATTTCTGTTCTTGTCCCTCATACATCTTTGGAGAA...GAGCAGCTTCTCAGCCCCTTGGAGCTGACAACTTTCCCTCAAATGTCCTGGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551544.5
CDS GCA 90 bp AGGCGGGAGCAAAACCCGGCCGCTGCTCTGCACGCTGCTCCCGCCTaGACGCCTGGCCTCGCCCCACGCCCGCCGGGCTCCGCCGCCTGC +
Preference number: 5 (lower is better)
Translates to: RREQNPAAALHAAPA*TPGLAPRPPGSAAC
Trigger: GCAGGCGGCGGAGCCCGGCGGGCGTGGGGCGAGGCCAGGCGTGCAGGCGGGAGCAGCGTGCAGAGCAGCGGCCGGGTTTTGCTCCCGCCT
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548860.5
CDS CCA 90 bp CCATCCTGGTCTCGAGGGGCGCCCCAGCTAAGCCGGGCAGCGTCCTaGCCGGGACTGGGCAGCAGGGAGTACAGAGTCGCGGGACCGCTC +
Preference number: 5 (lower is better)
Translates to: PSWSRGAPQLSRAAS*PGLGSREYRVAGPL
Trigger: GAGCGGTCCCGCGACTCTGTACTCCCTGCTGCCCAGTCCCGGCCAGGACGCTGCCCGGCTTAGCTGGGGCGCCCCTCGAGACCAGGATGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000540990.5
ENST00000550391.5
CDS CCA 90 bp CGTCCCCGGCTCGGCTCTGTGTCTCCAGAGGGATCGGCATCCCTGTaGAGAGAGCCCAGCTGGGATCGCCCCGCGCCCGCGGAGTCTCTG +
Preference number: 5 (lower is better)
Translates to: RPRLGSVSPEGSASL*REPSWDRPAPAESL
Trigger: CAGAGACTCCGCGGGCGCGGGGCGATCCCAGCTGGGCTCTCTCCACAGGGATGCCGATCCCTCTGGAGACACAGAGCCGAGCCGGGGACG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548860.5
CDS-3UTR CAA 90 bp CCAGGAGGTGAGGGGGTCCCCTGTTTCTCCCAGAACCTTGGGACCACAGGCAGCAGATCCTGTCCAGGCTaGGCGGGAGCTCTCGCTGGC +
Preference number: 5 (lower is better)
Translates to: PGGEGVPCFSQNLGTTGSRSCPG*AGALAG
Trigger: GCCAGCGAGAGCTCCCGCCAAGCCTGGACAGGATCT...GCTGCCTGTGGTCCCAAGGTTCTGGGAGAAACAGGGGACCCCCTCACCTCCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000301050.7
ENST00000536187.6
ENST00000540990.5
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR CAA 90 bp TACCTGGAATGGGAGCCTAGTAGGGGTCACTGCCCAGGAGGTGAGGGGGTCCCCAGATCCTGTCCAGGCTaGGCGGGAGCTCTCGCTGGC +
Preference number: 5 (lower is better)
Translates to: YLEWEPSRGHCPGGEGVPRSCPG*AGALAG
Trigger: GCCAGCGAGAGCTCCCGCCAAGCCTGGACAGGATCT...GGGGACCCCCTCACCTCCTGGGCAGTGACCCCTACTAGGCTCCCATTCCAGGTA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000301050.7
ENST00000536187.6
ENST00000540990.5
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR CAA 90 bp TACCTGGAATGGGAGCCTAGTAGGGGTCACTGCCCAGGAGGTGAGGGGGTCCCCTTGGGCCAAGGCCGGTaGCGCTGCCAGTTCCGGTCA +
Preference number: 5 (lower is better)
Translates to: YLEWEPSRGHCPGGEGVPLGQGR*RCQFRS
Trigger: TGACCGGAACTGGCAGCGCAACCGGCCTTGGCCCAA...GGGGACCCCCTCACCTCCTGGGCAGTGACCCCTACTAGGCTCCCATTCCAGGTA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000301050.7
ENST00000536187.6
ENST00000540990.5
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR CAA 90 bp TACCTGGAATGGGAGCCTAGTAGGGGTCACTGCCCAGGAGGTGAGGGGGTCCCCGGAGGGGAGCGTCGGTaGCCAATGTCACTCAGGCTG +
Preference number: 5 (lower is better)
Translates to: YLEWEPSRGHCPGGEGVPGGERR*PMSLRL
Trigger: CAGCCTGAGTGACATTGGCAACCGACGCTCCCCTCC...GGGGACCCCCTCACCTCCTGGGCAGTGACCCCTACTAGGCTCCCATTCCAGGTA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000301050.7
ENST00000536187.6
ENST00000540990.5
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR CAA 90 bp GCCCTCCTTCCCCAAACCCCCATCCAGGTTGGCTCCCATCTGCCACTTGGCTTCTTGGGCCAAGGCCGGTaGCGCTGCCAGTTCCGGTCA +
Preference number: 5 (lower is better)
Translates to: ALLPQTPIQVGSHLPLGFLGQGR*RCQFRS
Trigger: TGACCGGAACTGGCAGCGCAACCGGCCTTGGCCCAA...GAAGCCAAGTGGCAGATGGGAGCCAACCTGGATGGGGGTTTGGGGAAGGAGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR CAA 90 bp TGGGGCATCCCTTCCCTGAGTCTGGTGGGAAGGACCCTGCTAAGGGGATCCTGGTTGGGCCAAGGCCGGTaGCGCTGCCAGTTCCGGTCA +
Preference number: 5 (lower is better)
Translates to: WGIPSLSLVGRTLLRGSWLGQGR*RCQFRS
Trigger: TGACCGGAACTGGCAGCGCAACCGGCCTTGGCCCAA...CCAGGATCCCCTTAGCAGGGTCCTTCCCACCAGACTCAGGGAAGGGATGCCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR CAA 90 bp CCAGGAGGTGAGGGGGTCCCCTGTTTCTCCCAGAACCTTGGGACCACAGGCAGCGCCACAGGTTTGTGCTaGGCCCTTTCGAGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: PGGEGVPCFSQNLGTTGSATGLC*ALSSCC
Trigger: GCAGCAGCTCGAAAGGGCCAAGCACAAACCTGTGGC...GCTGCCTGTGGTCCCAAGGTTCTGGGAGAAACAGGGGACCCCCTCACCTCCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301050.7
ENST00000536187.6
ENST00000540990.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR CAA 90 bp TACCTGGAATGGGAGCCTAGTAGGGGTCACTGCCCAGGAGGTGAGGGGGTCCCCGCCACAGGTTTGTGCTaGGCCCTTTCGAGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: YLEWEPSRGHCPGGEGVPATGLC*ALSSCC
Trigger: GCAGCAGCTCGAAAGGGCCAAGCACAAACCTGTGGC...GGGGACCCCCTCACCTCCTGGGCAGTGACCCCTACTAGGCTCCCATTCCAGGTA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000301050.7
ENST00000536187.6
ENST00000540990.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR CAA 90 bp CAGCAGCTGCTGGTTCTGAAGTCCGGGGATGGCACTGGGAGGACCCAGAAGTCCGGAGGGGAGCGTCGGTaGCCAATGTCACTCAGGCTG +
Preference number: 5 (lower is better)
Translates to: QQLLVLKSGDGTGRTQKSGGERR*PMSLRL
Trigger: CAGCCTGAGTGACATTGGCAACCGACGCTCCCCTCC...GGACTTCTGGGTCCTCCCAGTGCCATCCCCGGACTTCAGAACCAGCAGCTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551544.5
CDS GCA 90 bp CCATCCCCACGTCGCACCCTCGCTCCTCGGCTTCCCCTGCCGCTCTaGTTCTTCCCTAAAGTCCTCCCGAGAAAGAGTAGGGACTCTGGA +
Preference number: 5 (lower is better)
Translates to: PSPRRTLAPRLPLPL*FFPKVLPRKSRDSG
Trigger: TCCAGAGTCCCTACTCTTTCTCGGGAGGACTTTAGGGAAGAAGCAGAGCGGCAGGGGAAGCCGAGGAGCGAGGGTGCGACGTGGGGATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548860.5
CDS GCA 90 bp CTGTCCTTCCATCCCCACGTCGCACCCTCGCTCCTCGGCTTCCCCTaGCGCTCTGCTTCTTCCCTAAAGTCCTCCCGAGAAAGAGTAGGG +
Preference number: 5 (lower is better)
Translates to: LSFHPHVAPSLLGFP*RSASSLKSSRERVG
Trigger: CCCTACTCTTTCTCGGGAGGACTTTAGGGAAGAAGCAGAGCGGCAGGGGAAGCCGAGGAGCGAGGGTGCGACGTGGGGATGGAAGGACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548860.5
CDS-3UTR CAA 90 bp ACATGCCCTCCTTCCCCAAACCCCCATCCAGGTTGGCTCCCATCTGCCACTTGGGGAGGGGAGCGTCGGTaGCCAATGTCACTCAGGCTG +
Preference number: 5 (lower is better)
Translates to: TCPPSPNPHPGWLPSATWGGERR*PMSLRL
Trigger: CAGCCTGAGTGACATTGGCAACCGACGCTCCCCTCC...CCAAGTGGCAGATGGGAGCCAACCTGGATGGGGGTTTGGGGAAGGAGGGCATGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR CAA 90 bp CATATGGGGGAACATGTTCCGCCTAGAGATGGCGGAGGGGAGCGTCGGTTGCCAGGAGGGGAGCGTCGGTaGCCAATGTCACTCAGGCTG +
Preference number: 5 (lower is better)
Translates to: HMGEHVPPRDGGGERRLPGGERR*PMSLRL
Trigger: CAGCCTGAGTGACATTGGCAACCGACGCTCCCCTCC...TGGCAACCGACGCTCCCCTCCGCCATCTCTAGGCGGAACATGTTCCCCCATATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000548874.5
CDS-3UTR CAA 90 bp GCCCGGATTGTTGAGCACAGATCGCTTTGCCAGGGAGAGGTCGGCTGTGACTCGGGAGGGGAGCGTCGGTaGCCAATGTCACTCAGGCTG +
Preference number: 5 (lower is better)
Translates to: ARIVEHRSLCQGEVGCDSGGERR*PMSLRL
Trigger: CAGCCTGAGTGACATTGGCAACCGACGCTCCCCTCC...CGAGTCACAGCCGACCTCTCCCTGGCAAAGCGATCTGTGCTCAACAATCCGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000550483.5
ENST00000551544.5
CDS-3UTR CAA 90 bp TACCTGGAATGGGAGCCTAGTAGGGGTCACTGCCCAGGAGGTGAGGGGGTCCCCTTCCGGTCACTGTGGTaGTGCTCTGAGTCCTGGGCT +
Preference number: 5 (lower is better)
Translates to: YLEWEPSRGHCPGGEGVPFRSLW*CSESWA
Trigger: AGCCCAGGACTCAGAGCACAACCACAGTGACCGGAA...GGGGACCCCCTCACCTCCTGGGCAGTGACCCCTACTAGGCTCCCATTCCAGGTA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000301050.7
ENST00000536187.6
ENST00000540990.5
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR CAA 90 bp CCCCAAACCCCCATCCAGGTTGGCTCCCATCTGCCACTTGGCTTCACCATGCTCCCTGCTGCTCCAGTCTaGGATGTGGCTGCCACACCC +
Preference number: 5 (lower is better)
Translates to: PQTPIQVGSHLPLGFTMLPAAPV*DVAATP
Trigger: GGGTGTGGCAGCCACATCCAAGACTGGAGCAGCAGG...GAGCATGGTGAAGCCAAGTGGCAGATGGGAGCCAACCTGGATGGGGGTTTGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS GCA 90 bp TGGGGGAACATGTTCCGCCTAGAGATGGCGGAGGGGAGCGTCGGTTaGCAATGTCACTCAGGCTGGAAGGGTTCCCAGATCTCCTGGCCT +
Preference number: 5 (lower is better)
Translates to: WGNMFRLEMAEGSVG*QCHSGWKGSQISWP
Trigger: AGGCCAGGAGATCTGGGAACCCTTCCAGCCTGAGTGACATTGGCAACCGACGCTCCCCTCCGCCATCTCTAGGCGGAACATGTTCCCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000547818.5
ENST00000550391.5
ENST00000550483.5
CDS CCA 90 bp GAGGTCAGTAGAAACCATGGCCCTGGTGCCTGTCTCATGCCTGGTTaGCGTCAGGGCAGATCCAGAGGTTCTGGGCTCCCTCCCCTCTCT +
Preference number: 5 (lower is better)
Translates to: EVSRNHGPGACLMPG*RQGRSRGSGLPPLS
Trigger: AGAGAGGGGAGGGAGCCCAGAACCTCTGGATCTGCCCTGACGCCAACCAGGCATGAGACAGGCACCAGGGCCATGGTTTCTACTGACCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000548860.5
ENST00000549226.5
CDS-3UTR CAA 90 bp CCCCAAACCCCCATCCAGGTTGGCTCCCATCTGCCACTTGGCTTCACCATGCTCGCCACAGGTTTGTGCTaGGCCCTTTCGAGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: PQTPIQVGSHLPLGFTMLATGLC*ALSSCC
Trigger: GCAGCAGCTCGAAAGGGCCAAGCACAAACCTGTGGC...GAGCATGGTGAAGCCAAGTGGCAGATGGGAGCCAACCTGGATGGGGGTTTGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301050.7
ENST00000551544.5
CDS-3UTR CAA 90 bp CATATGGGGGAACATGTTCCGCCTAGAGATGGCGGAGGGGAGCGTCGGTTGCCAGCCACAGGTTTGTGCTaGGCCCTTTCGAGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: HMGEHVPPRDGGGERRLPATGLC*ALSSCC
Trigger: GCAGCAGCTCGAAAGGGCCAAGCACAAACCTGTGGC...TGGCAACCGACGCTCCCCTCCGCCATCTCTAGGCGGAACATGTTCCCCCATATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000548874.5
CDS-3UTR CAA 90 bp CCAGGAGGTGAGGGGGTCCCCTGTTTCTCCCAGAACCTTGGGACCACAGGCAGCGCAAATGCCACAGGTTaGTGCTTGGCCCTTTCGAGC +
Preference number: 5 (lower is better)
Translates to: PGGEGVPCFSQNLGTTGSANATG*CLALSS
Trigger: GCTCGAAAGGGCCAAGCACAAACCTGTGGCATTTGC...GCTGCCTGTGGTCCCAAGGTTCTGGGAGAAACAGGGGACCCCCTCACCTCCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301050.7
ENST00000536187.6
ENST00000540990.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR CAA 90 bp ACATGCCCTCCTTCCCCAAACCCCCATCCAGGTTGGCTCCCATCTGCCACTTGGGCCTTCTGCTCCTGTTaGAGCCGGATGCTCTCCAGG +
Preference number: 5 (lower is better)
Translates to: TCPPSPNPHPGWLPSATWAFCSC*SRMLSR
Trigger: CCTGGAGAGCATCCGGCTCAAACAGGAGCAGAAGGC...CCAAGTGGCAGATGGGAGCCAACCTGGATGGGGGTTTGGGGAAGGAGGGCATGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR CAA 90 bp TACCTGGAATGGGAGCCTAGTAGGGGTCACTGCCCAGGAGGTGAGGGGGTCCCCCTCTTGCCCGGATTGTaGAGCACAGATCGCTTTGCC +
Preference number: 5 (lower is better)
Translates to: YLEWEPSRGHCPGGEGVPLLPGL*STDRFA
Trigger: GGCAAAGCGATCTGTGCTCAACAATCCGGGCAAGAG...GGGGACCCCCTCACCTCCTGGGCAGTGACCCCTACTAGGCTCCCATTCCAGGTA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000301050.7
ENST00000536187.6
ENST00000540990.5
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR CAA 90 bp CTGAGTCTGGTGGGAAGGACCCTGCTAAGGGGATCCTGGCCTGAGGGCACTGCCCTCTTGCCCGGATTGTaGAGCACAGATCGCTTTGCC +
Preference number: 5 (lower is better)
Translates to: LSLVGRTLLRGSWPEGTALLPGL*STDRFA
Trigger: GGCAAAGCGATCTGTGCTCAACAATCCGGGCAAGAG...GGCAGTGCCCTCAGGCCAGGATCCCCTTAGCAGGGTCCTTCCCACCAGACTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR CAA 90 bp GCAGAACACACAGCTAGTACCTGGAATGGGAGCCTAGTAGGGGTCACTGCCCAGAGATCCTGTCCAGGCTaGGCGGGAGCTCTCGCTGGC +
Preference number: 5 (lower is better)
Translates to: AEHTASTWNGSLVGVTAQRSCPG*AGALAG
Trigger: GCCAGCGAGAGCTCCCGCCAAGCCTGGACAGGATCT...CTGGGCAGTGACCCCTACTAGGCTCCCATTCCAGGTACTAGCTGTGTGTTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301050.7
ENST00000536187.6
ENST00000540990.5
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR CAA 90 bp CCAGGAGGTGAGGGGGTCCCCTGTTTCTCCCAGAACCTTGGGACCACAGGCAGCGCCTGCTCAGGGACCTaGTTTCTTCCTCATGCCATG +
Preference number: 5 (lower is better)
Translates to: PGGEGVPCFSQNLGTTGSACSGT*FLPHAM
Trigger: CATGGCATGAGGAAGAAACAAGGTCCCTGAGCAGGC...GCTGCCTGTGGTCCCAAGGTTCTGGGAGAAACAGGGGACCCCCTCACCTCCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR CAA 90 bp CCAGGAGGTGAGGGGGTCCCCTGTTTCTCCCAGAACCTTGGGACCACAGGCAGCTGCCAAAGCAGTCCCTaGACTGTCAGGACTTGTGCC +
Preference number: 5 (lower is better)
Translates to: PGGEGVPCFSQNLGTTGSCQSSP*TVRTCA
Trigger: GGCACAAGTCCTGACAGTCAAGGGACTGCTTTGGCA...GCTGCCTGTGGTCCCAAGGTTCTGGGAGAAACAGGGGACCCCCTCACCTCCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR CAA 90 bp AGCCATAAGGCAAGAGTAGCCGGGGAGACAGGTCCTCTGTGCCCTGTCTCTCCCGCTCCCATCTGCCACTaGGCTTCACCATGCTCCTGG +
Preference number: 5 (lower is better)
Translates to: SHKARVAGETGPLCPVSPAPICH*ASPCSW
Trigger: CCAGGAGCATGGTGAAGCCAAGTGGCAGATGGGAGC...GGGAGAGACAGGGCACAGAGGACCTGTCTCCCCGGCTACTCTTGCCTTATGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR CAA 90 bp GTTGAGCACAGATCGCTTTGCCAGGGAGAGGTCGGCTGTGACTCGGGTGATGGAGCCTTCTGCTCCTGTTaGAGCCGGATGCTCTCCAGG +
Preference number: 5 (lower is better)
Translates to: VEHRSLCQGEVGCDSGDGAFCSC*SRMLSR
Trigger: CCTGGAGAGCATCCGGCTCAAACAGGAGCAGAAGGC...TCCATCACCCGAGTCACAGCCGACCTCTCCCTGGCAAAGCGATCTGTGCTCAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000550391.5
ENST00000550483.5
ENST00000551544.5
CDS-3UTR CAA 90 bp GCAGAACACACAGCTAGTACCTGGAATGGGAGCCTAGTAGGGGTCACTGCCCAGGGAGGGGAGCGTCGGTaGCCAATGTCACTCAGGCTG +
Preference number: 5 (lower is better)
Translates to: AEHTASTWNGSLVGVTAQGGERR*PMSLRL
Trigger: CAGCCTGAGTGACATTGGCAACCGACGCTCCCCTCC...CTGGGCAGTGACCCCTACTAGGCTCCCATTCCAGGTACTAGCTGTGTGTTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000301050.7
ENST00000536187.6
ENST00000540990.5
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR CAA 90 bp GGTGCAGAACACACAGCTAGTACCTGGAATGGGAGCCTAGTAGGGGTCACTGCCGGAGGGGAGCGTCGGTaGCCAATGTCACTCAGGCTG +
Preference number: 5 (lower is better)
Translates to: GAEHTASTWNGSLVGVTAGGERR*PMSLRL
Trigger: CAGCCTGAGTGACATTGGCAACCGACGCTCCCCTCC...GGCAGTGACCCCTACTAGGCTCCCATTCCAGGTACTAGCTGTGTGTTCTGCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000301050.7
ENST00000536187.6
ENST00000540990.5
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR CAA 90 bp TTGTTGAGCACAGATCGCTTTGCCAGGGAGAGGTCGGCTGTGACTCGGGTGATGGGAGGGGAGCGTCGGTaGCCAATGTCACTCAGGCTG +
Preference number: 5 (lower is better)
Translates to: LLSTDRFARERSAVTRVMGGERR*PMSLRL
Trigger: CAGCCTGAGTGACATTGGCAACCGACGCTCCCCTCC...CATCACCCGAGTCACAGCCGACCTCTCCCTGGCAAAGCGATCTGTGCTCAACAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000550391.5
ENST00000550483.5
ENST00000551544.5
CDS-3UTR CAA 90 bp TACCTGGAATGGGAGCCTAGTAGGGGTCACTGCCCAGGAGGTGAGGGGGTCCCCGTCCTCTTGCCCGGATaGTTGAGCACAGATCGCTTT +
Preference number: 5 (lower is better)
Translates to: YLEWEPSRGHCPGGEGVPVLLPG*LSTDRF
Trigger: AAAGCGATCTGTGCTCAACAATCCGGGCAAGAGGAC...GGGGACCCCCTCACCTCCTGGGCAGTGACCCCTACTAGGCTCCCATTCCAGGTA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000301050.7
ENST00000536187.6
ENST00000540990.5
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR CAA 90 bp CCAGGAGGTGAGGGGGTCCCCTGTTTCTCCCAGAACCTTGGGACCACAGGCAGCGTCCTCTTGCCCGGATaGTTGAGCACAGATCGCTTT +
Preference number: 5 (lower is better)
Translates to: PGGEGVPCFSQNLGTTGSVLLPG*LSTDRF
Trigger: AAAGCGATCTGTGCTCAACAATCCGGGCAAGAGGAC...GCTGCCTGTGGTCCCAAGGTTCTGGGAGAAACAGGGGACCCCCTCACCTCCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000301050.7
ENST00000536187.6
ENST00000540990.5
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR CAA 90 bp AGCCGGTCTTGGGGGTCATGCCCGTTAGCACTAGGCAGCCCCGAGGTGTGTTGGGTCCTCTTGCCCGGATaGTTGAGCACAGATCGCTTT +
Preference number: 5 (lower is better)
Translates to: SRSWGSCPLALGSPEVCWVLLPG*LSTDRF
Trigger: AAAGCGATCTGTGCTCAACAATCCGGGCAAGAGGAC...CCAACACACCTCGGGGCTGCCTAGTGCTAACGGGCATGACCCCCAAGACCGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000551544.5
CDS-3UTR CAA 90 bp GCCCTCCTTCCCCAAACCCCCATCCAGGTTGGCTCCCATCTGCCACTTGGCTTCTGCCAAAGCAGTCCCTaGACTGTCAGGACTTGTGCC +
Preference number: 5 (lower is better)
Translates to: ALLPQTPIQVGSHLPLGFCQSSP*TVRTCA
Trigger: GGCACAAGTCCTGACAGTCAAGGGACTGCTTTGGCA...GAAGCCAAGTGGCAGATGGGAGCCAACCTGGATGGGGGTTTGGGGAAGGAGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR CAA 90 bp TCCAGAGCCCTGGACTGGGCACTCCTCATCCAGTACGCCACAGTAGCTGACATTCCTGCTGCTCCAGTCTaGGATGTGGCTGCCACACCC +
Preference number: 5 (lower is better)
Translates to: SRALDWALLIQYATVADIPAAPV*DVAATP
Trigger: GGGTGTGGCAGCCACATCCAAGACTGGAGCAGCAGG...AATGTCAGCTACTGTGGCGTACTGGATGAGGAGTGCCCAGTCCAGGGCTCTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551544.5
CDS-3UTR CAA 90 bp TGCTCCAGTCTTGGATGTGGCTGCCACACCCCAGCAAACAGATGGGTGTGCCACGCTCCCATCTGCCACTaGGCTTCACCATGCTCCTGG +
Preference number: 5 (lower is better)
Translates to: CSSLGCGCHTPANRWVCHAPICH*ASPCSW
Trigger: CCAGGAGCATGGTGAAGCCAAGTGGCAGATGGGAGC...GTGGCACACCCATCTGTTTGCTGGGGTGTGGCAGCCACATCCAAGACTGGAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR CAA 90 bp AGCCATAAGGCAAGAGTAGCCGGGGAGACAGGTCCTCTGTGCCCTGTCTCTCCCAAACCCCCATCCAGGTaGGCTCCCATCTGCCACTTG +
Preference number: 5 (lower is better)
Translates to: SHKARVAGETGPLCPVSPKPPSR*APICHL
Trigger: CAAGTGGCAGATGGGAGCCAACCTGGATGGGGGTTT...GGGAGAGACAGGGCACAGAGGACCTGTCTCCCCGGCTACTCTTGCCTTATGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS GCA 90 bp ATGGACATGAGGTCAGTAGAAACCATGGCCCTGGTGCCTGTCTCATaGCTGGTTGGCGTCAGGGCAGATCCAGAGGTTCTGGGCTCCCTC +
Preference number: 5 (lower is better)
Translates to: MDMRSVETMALVPVS*LVGVRADPEVLGSL
Trigger: GAGGGAGCCCAGAACCTCTGGATCTGCCCTGACGCCAACCAGGCATGAGACAGGCACCAGGGCCATGGTTTCTACTGACCTCATGTCCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000548860.5
ENST00000549226.5
CDS GCA 90 bp CACTTCCGTCTCTCCTGTCTAAGGTCCTCGTTCTGTTTTTCCGTGTaGCTCCCACTGTCCTTCCATCCCCACGTCGCACCCTCGCTCCTC +
Preference number: 5 (lower is better)
Translates to: HFRLSCLRSSFCFSV*LPLSFHPHVAPSLL
Trigger: GAGGAGCGAGGGTGCGACGTGGGGATGGAAGGACAGTGGGAGGCACACGGAAAAACAGAACGAGGACCTTAGACAGGAGAGACGGAAGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000548860.5
CDS-3UTR CAA 90 bp GCAGAACACACAGCTAGTACCTGGAATGGGAGCCTAGTAGGGGTCACTGCCCAGGCCACAGGTTTGTGCTaGGCCCTTTCGAGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: AEHTASTWNGSLVGVTAQATGLC*ALSSCC
Trigger: GCAGCAGCTCGAAAGGGCCAAGCACAAACCTGTGGC...CTGGGCAGTGACCCCTACTAGGCTCCCATTCCAGGTACTAGCTGTGTGTTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301050.7
ENST00000536187.6
ENST00000540990.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR CAA 90 bp CATATGGGGGAACATGTTCCGCCTAGAGATGGCGGAGGGGAGCGTCGGTTGCCAGCAAATGCCACAGGTTaGTGCTTGGCCCTTTCGAGC +
Preference number: 5 (lower is better)
Translates to: HMGEHVPPRDGGGERRLPANATG*CLALSS
Trigger: GCTCGAAAGGGCCAAGCACAAACCTGTGGCATTTGC...TGGCAACCGACGCTCCCCTCCGCCATCTCTAGGCGGAACATGTTCCCCCATATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000548874.5
CDS-3UTR CAA 90 bp GCAGAACACACAGCTAGTACCTGGAATGGGAGCCTAGTAGGGGTCACTGCCCAGGCCTTCTGCTCCTGTTaGAGCCGGATGCTCTCCAGG +
Preference number: 5 (lower is better)
Translates to: AEHTASTWNGSLVGVTAQAFCSC*SRMLSR
Trigger: CCTGGAGAGCATCCGGCTCAAACAGGAGCAGAAGGC...CTGGGCAGTGACCCCTACTAGGCTCCCATTCCAGGTACTAGCTGTGTGTTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301050.7
ENST00000536187.6
ENST00000540990.5
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR CAA 90 bp GGTGCAGAACACACAGCTAGTACCTGGAATGGGAGCCTAGTAGGGGTCACTGCCGCCTTCTGCTCCTGTTaGAGCCGGATGCTCTCCAGG +
Preference number: 5 (lower is better)
Translates to: GAEHTASTWNGSLVGVTAAFCSC*SRMLSR
Trigger: CCTGGAGAGCATCCGGCTCAAACAGGAGCAGAAGGC...GGCAGTGACCCCTACTAGGCTCCCATTCCAGGTACTAGCTGTGTGTTCTGCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301050.7
ENST00000536187.6
ENST00000540990.5
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR CAA 90 bp TGGGGCATCCCTTCCCTGAGTCTGGTGGGAAGGACCCTGCTAAGGGGATCCTGGGTCCTCTTGCCCGGATaGTTGAGCACAGATCGCTTT +
Preference number: 5 (lower is better)
Translates to: WGIPSLSLVGRTLLRGSWVLLPG*LSTDRF
Trigger: AAAGCGATCTGTGCTCAACAATCCGGGCAAGAGGAC...CCAGGATCCCCTTAGCAGGGTCCTTCCCACCAGACTCAGGGAAGGGATGCCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR CAA 90 bp TACCTGGAATGGGAGCCTAGTAGGGGTCACTGCCCAGGAGGTGAGGGGGTCCCCTCAATGATGGTCCTCTaGCCCGGATTGTTGAGCACA +
Preference number: 5 (lower is better)
Translates to: YLEWEPSRGHCPGGEGVPSMMVL*PGLLST
Trigger: TGTGCTCAACAATCCGGGCAAGAGGACCATCATTGA...GGGGACCCCCTCACCTCCTGGGCAGTGACCCCTACTAGGCTCCCATTCCAGGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000301050.7
ENST00000536187.6
ENST00000540990.5
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR CAA 90 bp CAAACCCCCATCCAGGTTGGCTCCCATCTGCCACTTGGCTTCACCATGCTCCTGTTCCGGTCACTGTGGTaGTGCTCTGAGTCCTGGGCT +
Preference number: 5 (lower is better)
Translates to: QTPIQVGSHLPLGFTMLLFRSLW*CSESWA
Trigger: AGCCCAGGACTCAGAGCACAACCACAGTGACCGGAA...CAGGAGCATGGTGAAGCCAAGTGGCAGATGGGAGCCAACCTGGATGGGGGTTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR CAA 90 bp GGCAGCTATGAGTCAGGGAACAAAGTCTGGAGCCCGGTTCTCCAAAGATGTATGGCTGGGCAGGGGGTTTaGGGGGCTGAGCCTAGTGCC +
Preference number: 5 (lower is better)
Translates to: GSYESGNKVWSPVLQRCMAGQGV*GAEPSA
Trigger: GGCACTAGGCTCAGCCCCCAAAACCCCCTGCCCAGC...CATACATCTTTGGAGAACCGGGCTCCAGACTTTGTTCCCTGACTCATAGCTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR CAA 90 bp ACATGCCCTCCTTCCCCAAACCCCCATCCAGGTTGGCTCCCATCTGCCACTTGGTGCCAAAGCAGTCCCTaGACTGTCAGGACTTGTGCC +
Preference number: 5 (lower is better)
Translates to: TCPPSPNPHPGWLPSATWCQSSP*TVRTCA
Trigger: GGCACAAGTCCTGACAGTCAAGGGACTGCTTTGGCA...CCAAGTGGCAGATGGGAGCCAACCTGGATGGGGGTTTGGGGAAGGAGGGCATGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR CAA 90 bp GGATGCCAAAGCAGTCCCTTGACTGTCAGGACTTGTGCCTGCTCAGGGACCTTGGCTCCCATCTGCCACTaGGCTTCACCATGCTCCTGG +
Preference number: 5 (lower is better)
Translates to: GCQSSPLTVRTCACSGTLAPICH*ASPCSW
Trigger: CCAGGAGCATGGTGAAGCCAAGTGGCAGATGGGAGC...CAAGGTCCCTGAGCAGGCACAAGTCCTGACAGTCAAGGGACTGCTTTGGCATCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR CAA 90 bp CCAGGAGGTGAGGGGGTCCCCTGTTTCTCCCAGAACCTTGGGACCACAGGCAGCCGTTCAGCAGGAAGGTaGCACTGGAGTCAGAAAAAG +
Preference number: 5 (lower is better)
Translates to: PGGEGVPCFSQNLGTTGSRSAGR*HWSQKK
Trigger: CTTTTTCTGACTCCAGTGCAACCTTCCTGCTGAACG...GCTGCCTGTGGTCCCAAGGTTCTGGGAGAAACAGGGGACCCCCTCACCTCCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000536187.6
CDS-3UTR CAA 90 bp ACTGGAGGCCCTGGATGCCAAAGCAGTCCCTTGACTGTCAGGACTTGTGCCTGCAGCTGCTCCGCATTCTaGCCCCATCTTTCCAGGCAC +
Preference number: 5 (lower is better)
Translates to: TGGPGCQSSPLTVRTCACSCSAF*PHLSRH
Trigger: GTGCCTGGAAAGATGGGGCAAGAATGCGGAGCAGCT...GCAGGCACAAGTCCTGACAGTCAAGGGACTGCTTTGGCATCCAGGGCCTCCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551544.5
CDS GCA 90 bp TGGGGGAACATGTTCCGCCTAGAGATGGCGGAGGGGAGCGTCGGTTaGCAATGTCACTCAGGCTGGAAGGGTTCCCAGATCTCCTCTTTA +
Preference number: 5 (lower is better)
Translates to: WGNMFRLEMAEGSVG*QCHSGWKGSQISSL
Trigger: TAAAGAGGAGATCTGGGAACCCTTCCAGCCTGAGTGACATTGGCAACCGACGCTCCCCTCCGCCATCTCTAGGCGGAACATGTTCCCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000548874.5
CDS-3UTR CAA 90 bp GTTGAGCACAGATCGCTTTGCCAGGGAGAGGTCGGCTGTGACTCGGGTGATGGAGCAAATGCCACAGGTTaGTGCTTGGCCCTTTCGAGC +
Preference number: 5 (lower is better)
Translates to: VEHRSLCQGEVGCDSGDGANATG*CLALSS
Trigger: GCTCGAAAGGGCCAAGCACAAACCTGTGGCATTTGC...TCCATCACCCGAGTCACAGCCGACCTCTCCCTGGCAAAGCGATCTGTGCTCAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000550391.5
ENST00000551544.5
CDS-3UTR CAA 90 bp AGGGAGAGGTCGGCTGTGACTCGGGTGATGGAGATCCTGCCATCAAATCTGTGTGCCTTCTGCTCCTGTTaGAGCCGGATGCTCTCCAGG +
Preference number: 5 (lower is better)
Translates to: RERSAVTRVMEILPSNLCAFCSC*SRMLSR
Trigger: CCTGGAGAGCATCCGGCTCAAACAGGAGCAGAAGGC...ACACAGATTTGATGGCAGGATCTCCATCACCCGAGTCACAGCCGACCTCTCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000550391.5
ENST00000550483.5
ENST00000551544.5
CDS-3UTR CAA 90 bp CAAACCCCCATCCAGGTTGGCTCCCATCTGCCACTTGGCTTCACCATGCTCCTGCTCTTGCCCGGATTGTaGAGCACAGATCGCTTTGCC +
Preference number: 5 (lower is better)
Translates to: QTPIQVGSHLPLGFTMLLLLPGL*STDRFA
Trigger: GGCAAAGCGATCTGTGCTCAACAATCCGGGCAAGAG...CAGGAGCATGGTGAAGCCAAGTGGCAGATGGGAGCCAACCTGGATGGGGGTTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR CAA 90 bp GTTGAGCACAGATCGCTTTGCCAGGGAGAGGTCGGCTGTGACTCGGGTGATGGACTCTTGCCCGGATTGTaGAGCACAGATCGCTTTGCC +
Preference number: 5 (lower is better)
Translates to: VEHRSLCQGEVGCDSGDGLLPGL*STDRFA
Trigger: GGCAAAGCGATCTGTGCTCAACAATCCGGGCAAGAG...TCCATCACCCGAGTCACAGCCGACCTCTCCCTGGCAAAGCGATCTGTGCTCAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000550483.5
ENST00000551544.5
CDS-3UTR CAA 90 bp ACATGCCCTCCTTCCCCAAACCCCCATCCAGGTTGGCTCCCATCTGCCACTTGGACTAGCTGCAGGGATTaGGCCAGCTCAAATATGCGC +
Preference number: 5 (lower is better)
Translates to: TCPPSPNPHPGWLPSATWTSCRD*ASSNMR
Trigger: GCGCATATTTGAGCTGGCCAAATCCCTGCAGCTAGT...CCAAGTGGCAGATGGGAGCCAACCTGGATGGGGGTTTGGGGAAGGAGGGCATGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR CAA 90 bp GCAGAACACACAGCTAGTACCTGGAATGGGAGCCTAGTAGGGGTCACTGCCCAGTTCCGGTCACTGTGGTaGTGCTCTGAGTCCTGGGCT +
Preference number: 5 (lower is better)
Translates to: AEHTASTWNGSLVGVTAQFRSLW*CSESWA
Trigger: AGCCCAGGACTCAGAGCACAACCACAGTGACCGGAA...CTGGGCAGTGACCCCTACTAGGCTCCCATTCCAGGTACTAGCTGTGTGTTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301050.7
ENST00000536187.6
ENST00000540990.5
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR CAA 90 bp GGTGCAGAACACACAGCTAGTACCTGGAATGGGAGCCTAGTAGGGGTCACTGCCTTCCGGTCACTGTGGTaGTGCTCTGAGTCCTGGGCT +
Preference number: 5 (lower is better)
Translates to: GAEHTASTWNGSLVGVTAFRSLW*CSESWA
Trigger: AGCCCAGGACTCAGAGCACAACCACAGTGACCGGAA...GGCAGTGACCCCTACTAGGCTCCCATTCCAGGTACTAGCTGTGTGTTCTGCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301050.7
ENST00000536187.6
ENST00000540990.5
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS CCA 90 bp CTCTCTTGCCTGGCACGGGGGAAGGAGAGGAGGGAGATGAGCCGTTaGATTTATTTAGAGCCTGATCTCCCTCCTACTGCTTCAGAGGGG +
Preference number: 5 (lower is better)
Translates to: LSCLARGKERREMSR*IYLEPDLPPTASEG
Trigger: CCCCTCTGAAGCAGTAGGAGGGAGATCAGGCTCTAAATAAATCCAACGGCTCATCTCCCTCCTCTCCTTCCCCCGTGCCAGGCAAGAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000552812.1
CDS-3UTR CAA 90 bp GCAGAACACACAGCTAGTACCTGGAATGGGAGCCTAGTAGGGGTCACTGCCCAGGCAAATGCCACAGGTTaGTGCTTGGCCCTTTCGAGC +
Preference number: 5 (lower is better)
Translates to: AEHTASTWNGSLVGVTAQANATG*CLALSS
Trigger: GCTCGAAAGGGCCAAGCACAAACCTGTGGCATTTGC...CTGGGCAGTGACCCCTACTAGGCTCCCATTCCAGGTACTAGCTGTGTGTTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301050.7
ENST00000536187.6
ENST00000540990.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR CAA 90 bp CTGAGTCTGGTGGGAAGGACCCTGCTAAGGGGATCCTGGCCTGAGGGCACTGCCCCGATCCACCAGTCATaGCTGTACTTCTCTTTAATG +
Preference number: 5 (lower is better)
Translates to: LSLVGRTLLRGSWPEGTAPIHQS*LYFSLM
Trigger: CATTAAAGAGAAGTACAGCAATGACTGGTGGATCGG...GGCAGTGCCCTCAGGCCAGGATCCCCTTAGCAGGGTCCTTCCCACCAGACTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547392.5
ENST00000551544.5
CDS-3UTR CAA 90 bp GTGCCCTGTCTCTCCCCATCTAACCCTAACCTAACAAGCGGCAGCTATGAGTCAGCCTTCTGCTCCTGTTaGAGCCGGATGCTCTCCAGG +
Preference number: 5 (lower is better)
Translates to: VPCLSPSNPNLTSGSYESAFCSC*SRMLSR
Trigger: CCTGGAGAGCATCCGGCTCAAACAGGAGCAGAAGGC...TGACTCATAGCTGCCGCTTGTTAGGTTAGGGTTAGATGGGGAGAGACAGGGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR CAA 90 bp GACCTTGTTTCTTCCTCATGCCATGGTGCCCACACCCCACCCTTTTGTCACTTTGGAGGGGAGCGTCGGTaGCCAATGTCACTCAGGCTG +
Preference number: 5 (lower is better)
Translates to: DLVSSSCHGAHTPPFCHFGGERR*PMSLRL
Trigger: CAGCCTGAGTGACATTGGCAACCGACGCTCCCCTCC...AAAGTGACAAAAGGGTGGGGTGTGGGCACCATGGCATGAGGAAGAAACAAGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR CAA 90 bp GCAGAACACACAGCTAGTACCTGGAATGGGAGCCTAGTAGGGGTCACTGCCCAGCTCTTGCCCGGATTGTaGAGCACAGATCGCTTTGCC +
Preference number: 5 (lower is better)
Translates to: AEHTASTWNGSLVGVTAQLLPGL*STDRFA
Trigger: GGCAAAGCGATCTGTGCTCAACAATCCGGGCAAGAG...CTGGGCAGTGACCCCTACTAGGCTCCCATTCCAGGTACTAGCTGTGTGTTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301050.7
ENST00000536187.6
ENST00000540990.5
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR CAA 90 bp ATCTGTACGGTCAGGTGCTTCATCTGTGACTTCCCCCGGGAGCGAATGAGACGCCTCTTGCCCGGATTGTaGAGCACAGATCGCTTTGCC +
Preference number: 5 (lower is better)
Translates to: ICTVRCFICDFPRERMRRLLPGL*STDRFA
Trigger: GGCAAAGCGATCTGTGCTCAACAATCCGGGCAAGAG...GCGTCTCATTCGCTCCCGGGGGAAGTCACAGATGAAGCACCTGACCGTACAGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000551544.5
CDS-3UTR CAA 90 bp CCCCAAACCCCCATCCAGGTTGGCTCCCATCTGCCACTTGGCTTCACCATGCTCTCAATGATGGTCCTCTaGCCCGGATTGTTGAGCACA +
Preference number: 5 (lower is better)
Translates to: PQTPIQVGSHLPLGFTMLSMMVL*PGLLST
Trigger: TGTGCTCAACAATCCGGGCAAGAGGACCATCATTGA...GAGCATGGTGAAGCCAAGTGGCAGATGGGAGCCAACCTGGATGGGGGTTTGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR CAA 90 bp GGAGGGGAGCGTCGGTTGCCAATGTCACTCAGGCTGGAAGGGTTCCCAGATCTCTCAATGATGGTCCTCTaGCCCGGATTGTTGAGCACA +
Preference number: 5 (lower is better)
Translates to: GGERRLPMSLRLEGFPDLSMMVL*PGLLST
Trigger: TGTGCTCAACAATCCGGGCAAGAGGACCATCATTGA...GAGATCTGGGAACCCTTCCAGCCTGAGTGACATTGGCAACCGACGCTCCCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551544.5
CDS-3UTR CAA 90 bp ATGATGTTTATTAGTGATGACAGTGAGGTGAGGCAGGGGCTTGTGGAGCATGCTGCTGGGCAGGGGGTTTaGGGGGCTGAGCCTAGTGCC +
Preference number: 5 (lower is better)
Translates to: MMFISDDSEVRQGLVEHAAGQGV*GAEPSA
Trigger: GGCACTAGGCTCAGCCCCCAAAACCCCCTGCCCAGC...AGCATGCTCCACAAGCCCCTGCCTCACCTCACTGTCATCACTAATAAACATCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR CAA 90 bp GCAGAACACACAGCTAGTACCTGGAATGGGAGCCTAGTAGGGGTCACTGCCCAGGCCTGCTCAGGGACCTaGTTTCTTCCTCATGCCATG +
Preference number: 5 (lower is better)
Translates to: AEHTASTWNGSLVGVTAQACSGT*FLPHAM
Trigger: CATGGCATGAGGAAGAAACAAGGTCCCTGAGCAGGC...CTGGGCAGTGACCCCTACTAGGCTCCCATTCCAGGTACTAGCTGTGTGTTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR CAA 90 bp GCAGAACACACAGCTAGTACCTGGAATGGGAGCCTAGTAGGGGTCACTGCCCAGCTTGACTGTCAGGACTaGTGCCTGCTCAGGGACCTT +
Preference number: 5 (lower is better)
Translates to: AEHTASTWNGSLVGVTAQLDCQD*CLLRDL
Trigger: AAGGTCCCTGAGCAGGCACAAGTCCTGACAGTCAAG...CTGGGCAGTGACCCCTACTAGGCTCCCATTCCAGGTACTAGCTGTGTGTTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR CAA 90 bp GGATGCCAAAGCAGTCCCTTGACTGTCAGGACTTGTGCCTGCTCAGGGACCTTGCTTGACTGTCAGGACTaGTGCCTGCTCAGGGACCTT +
Preference number: 5 (lower is better)
Translates to: GCQSSPLTVRTCACSGTLLDCQD*CLLRDL
Trigger: AAGGTCCCTGAGCAGGCACAAGTCCTGACAGTCAAG...CAAGGTCCCTGAGCAGGCACAAGTCCTGACAGTCAAGGGACTGCTTTGGCATCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR CAA 90 bp CATATGGGGGAACATGTTCCGCCTAGAGATGGCGGAGGGGAGCGTCGGTTGCCACGTTCAGCAGGAAGGTaGCACTGGAGTCAGAAAAAG +
Preference number: 5 (lower is better)
Translates to: HMGEHVPPRDGGGERRLPRSAGR*HWSQKK
Trigger: CTTTTTCTGACTCCAGTGCAACCTTCCTGCTGAACG...TGGCAACCGACGCTCCCCTCCGCCATCTCTAGGCGGAACATGTTCCCCCATATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000548874.5
CDS GCA 90 bp TCAGCAGGCTGCCCTCCAACACCATCCACATGTCAGTCTGCTCCTTaGAATAGCCCTTGCCTTCTCACCAGGGATGGGAAGAACCTCCTA +
Preference number: 5 (lower is better)
Translates to: SAGCPPTPSTCQSAP*NSPCLLTRDGKNLL
Trigger: TAGGAGGTTCTTCCCATCCCTGGTGAGAAGGCAAGGGCTATTGCAAGGAGCAGACTGACATGTGGATGGTGTTGGAGGGCAGCCTGCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552812.1
CDS-3UTR CAA 90 bp GCAGAACACACAGCTAGTACCTGGAATGGGAGCCTAGTAGGGGTCACTGCCCAGGTCCTCTTGCCCGGATaGTTGAGCACAGATCGCTTT +
Preference number: 5 (lower is better)
Translates to: AEHTASTWNGSLVGVTAQVLLPG*LSTDRF
Trigger: AAAGCGATCTGTGCTCAACAATCCGGGCAAGAGGAC...CTGGGCAGTGACCCCTACTAGGCTCCCATTCCAGGTACTAGCTGTGTGTTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301050.7
ENST00000536187.6
ENST00000540990.5
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR CAA 90 bp GGGCATTCATCGAAGCCAATGCTGGAGCGGGCAGAGGAGCGCTCAATGATGGTCTCAATGATGGTCCTCTaGCCCGGATTGTTGAGCACA +
Preference number: 5 (lower is better)
Translates to: GHSSKPMLERAEERSMMVSMMVL*PGLLST
Trigger: TGTGCTCAACAATCCGGGCAAGAGGACCATCATTGA...GACCATCATTGAGCGCTCCTCTGCCCGCTCCAGCATTGGCTTCGATGAATGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550483.5
CDS-3UTR CAA 90 bp GGTGCAGAACACACAGCTAGTACCTGGAATGGGAGCCTAGTAGGGGTCACTGCCACTAGCTGCAGGGATTaGGCCAGCTCAAATATGCGC +
Preference number: 5 (lower is better)
Translates to: GAEHTASTWNGSLVGVTATSCRD*ASSNMR
Trigger: GCGCATATTTGAGCTGGCCAAATCCCTGCAGCTAGT...GGCAGTGACCCCTACTAGGCTCCCATTCCAGGTACTAGCTGTGTGTTCTGCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301050.7
ENST00000536187.6
ENST00000540990.5
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR CAA 90 bp TTAATGGGGCATCCCTTCCCTGAGTCTGGTGGGAAGGACCCTGCTAAGGGGATCACTAGCTGCAGGGATTaGGCCAGCTCAAATATGCGC +
Preference number: 5 (lower is better)
Translates to: LMGHPFPESGGKDPAKGITSCRD*ASSNMR
Trigger: GCGCATATTTGAGCTGGCCAAATCCCTGCAGCTAGT...GATCCCCTTAGCAGGGTCCTTCCCACCAGACTCAGGGAAGGGATGCCCCATTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR CAA 90 bp AGCCATAAGGCAAGAGTAGCCGGGGAGACAGGTCCTCTGTGCCCTGTCTCTCCCTTTGGTGAGGACACTTaGACAAAGACGATGATGGGG +
Preference number: 5 (lower is better)
Translates to: SHKARVAGETGPLCPVSPFGEDT*TKTMMG
Trigger: CCCCATCATCGTCTTTGTCAAAGTGTCCTCACCAAA...GGGAGAGACAGGGCACAGAGGACCTGTCTCCCCGGCTACTCTTGCCTTATGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR CAA 90 bp TGCATGATGTTTATTAGTGATGACAGTGAGGTGAGGCAGGGGCTTGTGGAGCATAGATCCTGTCCAGGCTaGGCGGGAGCTCTCGCTGGC +
Preference number: 5 (lower is better)
Translates to: CMMFISDDSEVRQGLVEHRSCPG*AGALAG
Trigger: GCCAGCGAGAGCTCCCGCCAAGCCTGGACAGGATCT...ATGCTCCACAAGCCCCTGCCTCACCTCACTGTCATCACTAATAAACATCATGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS GCA 90 bp TCTTTCAGGGGCCTGGAGAGGTGTCAAAGAGTAAGACCCTCAAGGTaGTCTTCTCCTGGGAGATGGCTCTCGTTCAGCAGGAAGGTTGCA +
Preference number: 5 (lower is better)
Translates to: SFRGLERCQRVRPSR*SSPGRWLSFSRKVA
Trigger: TGCAACCTTCCTGCTGAACGAGAGCCATCTCCCAGGAGAAGAGCACCTTGAGGGTCTTACTCTTTGACACCTCTCCAGGCCCCTGAAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000550168.5
ENST00000552465.1
CDS-3UTR CAA 90 bp CCTTTTGTCACTTTAATGGGGCATCCCTTCCCTGAGTCTGGTGGGAAGGACCCTGCAAATGCCACAGGTTaGTGCTTGGCCCTTTCGAGC +
Preference number: 5 (lower is better)
Translates to: PFVTLMGHPFPESGGKDPANATG*CLALSS
Trigger: GCTCGAAAGGGCCAAGCACAAACCTGTGGCATTTGC...AGGGTCCTTCCCACCAGACTCAGGGAAGGGATGCCCCATTAAAGTGACAAAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547392.5
ENST00000551544.5
CDS-3UTR CAA 90 bp GTGCCCTGTCTCTCCCCATCTAACCCTAACCTAACAAGCGGCAGCTATGAGTCAGCAAATGCCACAGGTTaGTGCTTGGCCCTTTCGAGC +
Preference number: 5 (lower is better)
Translates to: VPCLSPSNPNLTSGSYESANATG*CLALSS
Trigger: GCTCGAAAGGGCCAAGCACAAACCTGTGGCATTTGC...TGACTCATAGCTGCCGCTTGTTAGGTTAGGGTTAGATGGGGAGAGACAGGGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301050.7
ENST00000551544.5
CDS-3UTR CAA 90 bp CCCCAAACCCCCATCCAGGTTGGCTCCCATCTGCCACTTGGCTTCACCATGCTCCCGATCCACCAGTCATaGCTGTACTTCTCTTTAATG +
Preference number: 5 (lower is better)
Translates to: PQTPIQVGSHLPLGFTMLPIHQS*LYFSLM
Trigger: CATTAAAGAGAAGTACAGCAATGACTGGTGGATCGG...GAGCATGGTGAAGCCAAGTGGCAGATGGGAGCCAACCTGGATGGGGGTTTGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301050.7
ENST00000551544.5
CDS-3UTR CAA 90 bp CATAAGGCAAGAGTAGCCGGGGAGACAGGTCCTCTGTGCCCTGTCTCTCCCCATCCATCAAATCTGTGTTaGAGGAAGTCGAAGAGAGCC +
Preference number: 5 (lower is better)
Translates to: HKARVAGETGPLCPVSPHPSNLC*RKSKRA
Trigger: GGCTCTCTTCGACTTCCTCAAACACAGATTTGATGG...ATGGGGAGAGACAGGGCACAGAGGACCTGTCTCCCCGGCTACTCTTGCCTTATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR CAA 90 bp ACTGGAGGCCCTGGATGCCAAAGCAGTCCCTTGACTGTCAGGACTTGTGCCTGCCCATCAAATCTGTGTTaGAGGAAGTCGAAGAGAGCC +
Preference number: 5 (lower is better)
Translates to: TGGPGCQSSPLTVRTCACPSNLC*RKSKRA
Trigger: GGCTCTCTTCGACTTCCTCAAACACAGATTTGATGG...GCAGGCACAAGTCCTGACAGTCAAGGGACTGCTTTGGCATCCAGGGCCTCCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR CAA 90 bp GGTGCAGAACACACAGCTAGTACCTGGAATGGGAGCCTAGTAGGGGTCACTGCCTCAATGATGGTCCTCTaGCCCGGATTGTTGAGCACA +
Preference number: 5 (lower is better)
Translates to: GAEHTASTWNGSLVGVTASMMVL*PGLLST
Trigger: TGTGCTCAACAATCCGGGCAAGAGGACCATCATTGA...GGCAGTGACCCCTACTAGGCTCCCATTCCAGGTACTAGCTGTGTGTTCTGCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301050.7
ENST00000536187.6
ENST00000540990.5
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR CAA 90 bp GTTGAGCACAGATCGCTTTGCCAGGGAGAGGTCGGCTGTGACTCGGGTGATGGATTTGGTGAGGACACTTaGACAAAGACGATGATGGGG +
Preference number: 5 (lower is better)
Translates to: VEHRSLCQGEVGCDSGDGFGEDT*TKTMMG
Trigger: CCCCATCATCGTCTTTGTCAAAGTGTCCTCACCAAA...TCCATCACCCGAGTCACAGCCGACCTCTCCCTGGCAAAGCGATCTGTGCTCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000550483.5
ENST00000551544.5
CDS-3UTR CAA 90 bp TGCTCCAGTCTTGGATGTGGCTGCCACACCCCAGCAAACAGATGGGTGTGCCACTTTGGTGAGGACACTTaGACAAAGACGATGATGGGG +
Preference number: 5 (lower is better)
Translates to: CSSLGCGCHTPANRWVCHFGEDT*TKTMMG
Trigger: CCCCATCATCGTCTTTGTCAAAGTGTCCTCACCAAA...GTGGCACACCCATCTGTTTGCTGGGGTGTGGCAGCCACATCCAAGACTGGAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR CAA 90 bp GTGCCCTGTCTCTCCCCATCTAACCCTAACCTAACAAGCGGCAGCTATGAGTCAGCCTGCTCAGGGACCTaGTTTCTTCCTCATGCCATG +
Preference number: 5 (lower is better)
Translates to: VPCLSPSNPNLTSGSYESACSGT*FLPHAM
Trigger: CATGGCATGAGGAAGAAACAAGGTCCCTGAGCAGGC...TGACTCATAGCTGCCGCTTGTTAGGTTAGGGTTAGATGGGGAGAGACAGGGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR CAA 90 bp TGCATGATGTTTATTAGTGATGACAGTGAGGTGAGGCAGGGGCTTGTGGAGCATCCTGCTGCTCCAGTCTaGGATGTGGCTGCCACACCC +
Preference number: 5 (lower is better)
Translates to: CMMFISDDSEVRQGLVEHPAAPV*DVAATP
Trigger: GGGTGTGGCAGCCACATCCAAGACTGGAGCAGCAGG...ATGCTCCACAAGCCCCTGCCTCACCTCACTGTCATCACTAATAAACATCATGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR CAA 90 bp GGCAGCTATGAGTCAGGGAACAAAGTCTGGAGCCCGGTTCTCCAAAGATGTATGAAACCCCCATCCAGGTaGGCTCCCATCTGCCACTTG +
Preference number: 5 (lower is better)
Translates to: GSYESGNKVWSPVLQRCMKPPSR*APICHL
Trigger: CAAGTGGCAGATGGGAGCCAACCTGGATGGGGGTTT...CATACATCTTTGGAGAACCGGGCTCCAGACTTTGTTCCCTGACTCATAGCTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR CAA 90 bp GGATGCCAAAGCAGTCCCTTGACTGTCAGGACTTGTGCCTGCTCAGGGACCTTGGCTGAACCAGGACATTaGAGGGAAAGTTGTCAGCTC +
Preference number: 5 (lower is better)
Translates to: GCQSSPLTVRTCACSGTLAEPGH*RESCQL
Trigger: GAGCTGACAACTTTCCCTCAAATGTCCTGGTTCAGC...CAAGGTCCCTGAGCAGGCACAAGTCCTGACAGTCAAGGGACTGCTTTGGCATCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551544.5
CDS TCA 90 bp CCTTCTTACAGGACATTTGAGGGAAAGTTGTCAGCTCCAAGGGGCTaGGAAGCTGCTCCGCATTCTTGCCCCATCTTTCCAGGCACTCTC +
Preference number: 5 (lower is better)
Translates to: PSYRTFEGKLSAPRG*EAAPHSCPIFPGTL
Trigger: GAGAGTGCCTGGAAAGATGGGGCAAGAATGCGGAGCAGCTTCTCAGCCCCTTGGAGCTGACAACTTTCCCTCAAATGTCCTGTAAGAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552812.1
CDS-3UTR CAA 90 bp GTTGAGCACAGATCGCTTTGCCAGGGAGAGGTCGGCTGTGACTCGGGTGATGGACCGATCCACCAGTCATaGCTGTACTTCTCTTTAATG +
Preference number: 5 (lower is better)
Translates to: VEHRSLCQGEVGCDSGDGPIHQS*LYFSLM
Trigger: CATTAAAGAGAAGTACAGCAATGACTGGTGGATCGG...TCCATCACCCGAGTCACAGCCGACCTCTCCCTGGCAAAGCGATCTGTGCTCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000550391.5
ENST00000550483.5
ENST00000551544.5
CDS-3UTR CAA 90 bp GCAGAACACACAGCTAGTACCTGGAATGGGAGCCTAGTAGGGGTCACTGCCCAGCCATCAAATCTGTGTTaGAGGAAGTCGAAGAGAGCC +
Preference number: 5 (lower is better)
Translates to: AEHTASTWNGSLVGVTAQPSNLC*RKSKRA
Trigger: GGCTCTCTTCGACTTCCTCAAACACAGATTTGATGG...CTGGGCAGTGACCCCTACTAGGCTCCCATTCCAGGTACTAGCTGTGTGTTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301050.7
ENST00000536187.6
ENST00000540990.5
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR CAA 90 bp GGTGCAGAACACACAGCTAGTACCTGGAATGGGAGCCTAGTAGGGGTCACTGCCCCATCAAATCTGTGTTaGAGGAAGTCGAAGAGAGCC +
Preference number: 5 (lower is better)
Translates to: GAEHTASTWNGSLVGVTAPSNLC*RKSKRA
Trigger: GGCTCTCTTCGACTTCCTCAAACACAGATTTGATGG...GGCAGTGACCCCTACTAGGCTCCCATTCCAGGTACTAGCTGTGTGTTCTGCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000301050.7
ENST00000536187.6
ENST00000540990.5
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR CAA 90 bp TTAATGGGGCATCCCTTCCCTGAGTCTGGTGGGAAGGACCCTGCTAAGGGGATCCCATCAAATCTGTGTTaGAGGAAGTCGAAGAGAGCC +
Preference number: 5 (lower is better)
Translates to: LMGHPFPESGGKDPAKGIPSNLC*RKSKRA
Trigger: GGCTCTCTTCGACTTCCTCAAACACAGATTTGATGG...GATCCCCTTAGCAGGGTCCTTCCCACCAGACTCAGGGAAGGGATGCCCCATTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR CAA 90 bp GGCAGCTATGAGTCAGGGAACAAAGTCTGGAGCCCGGTTCTCCAAAGATGTATGCTCTTGCCCGGATTGTaGAGCACAGATCGCTTTGCC +
Preference number: 5 (lower is better)
Translates to: GSYESGNKVWSPVLQRCMLLPGL*STDRFA
Trigger: GGCAAAGCGATCTGTGCTCAACAATCCGGGCAAGAG...CATACATCTTTGGAGAACCGGGCTCCAGACTTTGTTCCCTGACTCATAGCTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR CAA 90 bp CCTTTTGTCACTTTAATGGGGCATCCCTTCCCTGAGTCTGGTGGGAAGGACCCTACTAGCTGCAGGGATTaGGCCAGCTCAAATATGCGC +
Preference number: 5 (lower is better)
Translates to: PFVTLMGHPFPESGGKDPTSCRD*ASSNMR
Trigger: GCGCATATTTGAGCTGGCCAAATCCCTGCAGCTAGT...AGGGTCCTTCCCACCAGACTCAGGGAAGGGATGCCCCATTAAAGTGACAAAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR CAA 90 bp CTAACAAGCGGCAGCTATGAGTCAGGGAACAAAGTCTGGAGCCCGGTTCTCCAAACTAGCTGCAGGGATTaGGCCAGCTCAAATATGCGC +
Preference number: 5 (lower is better)
Translates to: LTSGSYESGNKVWSPVLQTSCRD*ASSNMR
Trigger: GCGCATATTTGAGCTGGCCAAATCCCTGCAGCTAGT...TTGGAGAACCGGGCTCCAGACTTTGTTCCCTGACTCATAGCTGCCGCTTGTTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR CAA 90 bp AGGAATTGGAGGAAAAGGGCATTCATCGAAGCCAATGCTGGAGCGGGCAGAGGAACTAGCTGCAGGGATTaGGCCAGCTCAAATATGCGC +
Preference number: 5 (lower is better)
Translates to: RNWRKRAFIEANAGAGRGTSCRD*ASSNMR
Trigger: GCGCATATTTGAGCTGGCCAAATCCCTGCAGCTAGT...TCCTCTGCCCGCTCCAGCATTGGCTTCGATGAATGCCCTTTTCCTCCAATTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550483.5
CDS-3UTR CAA 90 bp GCAGAACACACAGCTAGTACCTGGAATGGGAGCCTAGTAGGGGTCACTGCCCAGTTTGGTGAGGACACTTaGACAAAGACGATGATGGGG +
Preference number: 5 (lower is better)
Translates to: AEHTASTWNGSLVGVTAQFGEDT*TKTMMG
Trigger: CCCCATCATCGTCTTTGTCAAAGTGTCCTCACCAAA...CTGGGCAGTGACCCCTACTAGGCTCCCATTCCAGGTACTAGCTGTGTGTTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301050.7
ENST00000536187.6
ENST00000540990.5
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR CAA 90 bp GGTGCAGAACACACAGCTAGTACCTGGAATGGGAGCCTAGTAGGGGTCACTGCCTTTGGTGAGGACACTTaGACAAAGACGATGATGGGG +
Preference number: 5 (lower is better)
Translates to: GAEHTASTWNGSLVGVTAFGEDT*TKTMMG
Trigger: CCCCATCATCGTCTTTGTCAAAGTGTCCTCACCAAA...GGCAGTGACCCCTACTAGGCTCCCATTCCAGGTACTAGCTGTGTGTTCTGCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301050.7
ENST00000536187.6
ENST00000540990.5
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR CAA 90 bp AACACTACTAGCTGCAGGGATTTGGCCAGCTCAAATATGCGCTCGATCTCACTCTTCCGGTCACTGTGGTaGTGCTCTGAGTCCTGGGCT +
Preference number: 5 (lower is better)
Translates to: NTTSCRDLASSNMRSISLFRSLW*CSESWA
Trigger: AGCCCAGGACTCAGAGCACAACCACAGTGACCGGAA...GAGTGAGATCGAGCGCATATTTGAGCTGGCCAAATCCCTGCAGCTAGTAGTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551544.5
CDS CCA 90 bp TGCATGGGAGAGAGAAAGCCCACCCAAACCAAGTGGCTTCCCACCTaGGTCACTTATCGGTGTTATCTTGGCAAGACAAAGAAGAGCTGC +
Preference number: 5 (lower is better)
Translates to: CMGERKPTQTKWLPT*VTYRCYLGKTKKSC
Trigger: GCAGCTCTTCTTTGTCTTGCCAAGATAACACCGATAAGTGACCCAGGTGGGAAGCCACTTGGTTTGGGTGGGCTTTCTCTCTCCCATGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552465.1
CDS-3UTR CAA 90 bp GGTGCAGAACACACAGCTAGTACCTGGAATGGGAGCCTAGTAGGGGTCACTGCCCCGATCCACCAGTCATaGCTGTACTTCTCTTTAATG +
Preference number: 5 (lower is better)
Translates to: GAEHTASTWNGSLVGVTAPIHQS*LYFSLM
Trigger: CATTAAAGAGAAGTACAGCAATGACTGGTGGATCGG...GGCAGTGACCCCTACTAGGCTCCCATTCCAGGTACTAGCTGTGTGTTCTGCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301050.7
ENST00000536187.6
ENST00000540990.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR CAA 90 bp GCAGAACACACAGCTAGTACCTGGAATGGGAGCCTAGTAGGGGTCACTGCCCAGCCGATCCACCAGTCATaGCTGTACTTCTCTTTAATG +
Preference number: 5 (lower is better)
Translates to: AEHTASTWNGSLVGVTAQPIHQS*LYFSLM
Trigger: CATTAAAGAGAAGTACAGCAATGACTGGTGGATCGG...CTGGGCAGTGACCCCTACTAGGCTCCCATTCCAGGTACTAGCTGTGTGTTCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301050.7
ENST00000536187.6
ENST00000540990.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR CAA 90 bp GTCACTTTAATGGGGCATCCCTTCCCTGAGTCTGGTGGGAAGGACCCTGCTAAGCCATCAAATCTGTGTTaGAGGAAGTCGAAGAGAGCC +
Preference number: 5 (lower is better)
Translates to: VTLMGHPFPESGGKDPAKPSNLC*RKSKRA
Trigger: GGCTCTCTTCGACTTCCTCAAACACAGATTTGATGG...CTTAGCAGGGTCCTTCCCACCAGACTCAGGGAAGGGATGCCCCATTAAAGTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR CAA 90 bp CCAAAGCAGTCCCTTGACTGTCAGGACTTGTGCCTGCTCAGGGACCTTGTTTCTTCAATGATGGTCCTCTaGCCCGGATTGTTGAGCACA +
Preference number: 5 (lower is better)
Translates to: PKQSLDCQDLCLLRDLVSSMMVL*PGLLST
Trigger: TGTGCTCAACAATCCGGGCAAGAGGACCATCATTGA...AGAAACAAGGTCCCTGAGCAGGCACAAGTCCTGACAGTCAAGGGACTGCTTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR CAA 90 bp ATGATGTTTATTAGTGATGACAGTGAGGTGAGGCAGGGGCTTGTGGAGCATGCTAAACCCCCATCCAGGTaGGCTCCCATCTGCCACTTG +
Preference number: 5 (lower is better)
Translates to: MMFISDDSEVRQGLVEHAKPPSR*APICHL
Trigger: CAAGTGGCAGATGGGAGCCAACCTGGATGGGGGTTT...AGCATGCTCCACAAGCCCCTGCCTCACCTCACTGTCATCACTAATAAACATCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS CCA 90 bp CCTGTGGCTGAAGGGACTGTCTCCTCTCCTGAGTCCAGCACCAACTaGGGTTTGGTCATATACTGGATTCTTCTGTATTGGAAGTTCCCA +
Preference number: 5 (lower is better)
Translates to: PVAEGTVSSPESSTN*GLVIYWILLYWKFP
Trigger: TGGGAACTTCCAATACAGAAGAATCCAGTATATGACCAAACCCCAGTTGGTGCTGGACTCAGGAGAGGAGACAGTCCCTTCAGCCACAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000548860.5
ENST00000552465.1
CDS-3UTR CAA 90 bp TGCATGATGTTTATTAGTGATGACAGTGAGGTGAGGCAGGGGCTTGTGGAGCATGCAAATGCCACAGGTTaGTGCTTGGCCCTTTCGAGC +
Preference number: 5 (lower is better)
Translates to: CMMFISDDSEVRQGLVEHANATG*CLALSS
Trigger: GCTCGAAAGGGCCAAGCACAAACCTGTGGCATTTGC...ATGCTCCACAAGCCCCTGCCTCACCTCACTGTCATCACTAATAAACATCATGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000550190.1
ENST00000551544.5
CDS-3UTR CAA 90 bp AGGGAGAGGTCGGCTGTGACTCGGGTGATGGAGATCCTGCCATCAAATCTGTGTCCGATCCACCAGTCATaGCTGTACTTCTCTTTAATG +
Preference number: 5 (lower is better)
Translates to: RERSAVTRVMEILPSNLCPIHQS*LYFSLM
Trigger: CATTAAAGAGAAGTACAGCAATGACTGGTGGATCGG...ACACAGATTTGATGGCAGGATCTCCATCACCCGAGTCACAGCCGACCTCTCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000550391.5
ENST00000550483.5
ENST00000551544.5
CDS-3UTR CAA 90 bp AACACTACTAGCTGCAGGGATTTGGCCAGCTCAAATATGCGCTCGATCTCACTCGTCCTCTTGCCCGGATaGTTGAGCACAGATCGCTTT +
Preference number: 5 (lower is better)
Translates to: NTTSCRDLASSNMRSISLVLLPG*LSTDRF
Trigger: AAAGCGATCTGTGCTCAACAATCCGGGCAAGAGGAC...GAGTGAGATCGAGCGCATATTTGAGCTGGCCAAATCCCTGCAGCTAGTAGTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000550483.5
ENST00000551544.5
CDS-3UTR CAA 90 bp GACCTTGTTTCTTCCTCATGCCATGGTGCCCACACCCCACCCTTTTGTCACTTTTCAATGATGGTCCTCTaGCCCGGATTGTTGAGCACA +
Preference number: 5 (lower is better)
Translates to: DLVSSSCHGAHTPPFCHFSMMVL*PGLLST
Trigger: TGTGCTCAACAATCCGGGCAAGAGGACCATCATTGA...AAAGTGACAAAAGGGTGGGGTGTGGGCACCATGGCATGAGGAAGAAACAAGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000547392.5
ENST00000551544.5
CDS-3UTR CAA 90 bp TGCATGATGTTTATTAGTGATGACAGTGAGGTGAGGCAGGGGCTTGTGGAGCATGCCTGCTCAGGGACCTaGTTTCTTCCTCATGCCATG +
Preference number: 5 (lower is better)
Translates to: CMMFISDDSEVRQGLVEHACSGT*FLPHAM
Trigger: CATGGCATGAGGAAGAAACAAGGTCCCTGAGCAGGC...ATGCTCCACAAGCCCCTGCCTCACCTCACTGTCATCACTAATAAACATCATGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS CCA 90 bp CTGAAGGGACTGTCTCCTCTCCTGAGTCCAGCACCAACTGGGGTTTaGTCATATACTGGATTCTTCTGTATTGGAAGTTCCCAGACACTG +
Preference number: 5 (lower is better)
Translates to: LKGLSPLLSPAPTGV*SYTGFFCIGSSQTL
Trigger: CAGTGTCTGGGAACTTCCAATACAGAAGAATCCAGTATATGACCAAACCCCAGTTGGTGCTGGACTCAGGAGAGGAGACAGTCCCTTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000548860.5
ENST00000552465.1
CDS-3UTR CAA 90 bp CTAACAAGCGGCAGCTATGAGTCAGGGAACAAAGTCTGGAGCCCGGTTCTCCAACCGATCCACCAGTCATaGCTGTACTTCTCTTTAATG +
Preference number: 5 (lower is better)
Translates to: LTSGSYESGNKVWSPVLQPIHQS*LYFSLM
Trigger: CATTAAAGAGAAGTACAGCAATGACTGGTGGATCGG...TTGGAGAACCGGGCTCCAGACTTTGTTCCCTGACTCATAGCTGCCGCTTGTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301050.7
ENST00000551544.5
CDS-3UTR CAA 90 bp TGGACAGGAAGGAATTGGAGGAAAAGGGCATTCATCGAAGCCAATGCTGGAGCGCCATCAAATCTGTGTTaGAGGAAGTCGAAGAGAGCC +
Preference number: 5 (lower is better)
Translates to: WTGRNWRKRAFIEANAGAPSNLC*RKSKRA
Trigger: GGCTCTCTTCGACTTCCTCAAACACAGATTTGATGG...CGCTCCAGCATTGGCTTCGATGAATGCCCTTTTCCTCCAATTCCTTCCTGTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550483.5
CDS-3UTR CAA 90 bp GGCAGCTATGAGTCAGGGAACAAAGTCTGGAGCCCGGTTCTCCAAAGATGTATGTTTGGTGAGGACACTTaGACAAAGACGATGATGGGG +
Preference number: 5 (lower is better)
Translates to: GSYESGNKVWSPVLQRCMFGEDT*TKTMMG
Trigger: CCCCATCATCGTCTTTGTCAAAGTGTCCTCACCAAA...CATACATCTTTGGAGAACCGGGCTCCAGACTTTGTTCCCTGACTCATAGCTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301050.7
ENST00000547230.5
ENST00000551544.5
CDS-3UTR CAA 90 bp TGCATGATGTTTATTAGTGATGACAGTGAGGTGAGGCAGGGGCTTGTGGAGCATTCATTGCTGTACTTCTaGGCCCTTTCGAGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: CMMFISDDSEVRQGLVEHSLLYF*ALSSCC
Trigger: GCAGCAGCTCGAAAGGGCCAAGAAGTACAGCAATGA...ATGCTCCACAAGCCCCTGCCTCACCTCACTGTCATCACTAATAAACATCATGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547230.5
CDS-3UTR CAA 90 bp TGCATGATGTTTATTAGTGATGACAGTGAGGTGAGGCAGGGGCTTGTGGAGCATCCGATCCACCAGTCATaGCTGTACTTCTTGGCCCTT +
Preference number: 5 (lower is better)
Translates to: CMMFISDDSEVRQGLVEHPIHQS*LYFLAL
Trigger: AAGGGCCAAGAAGTACAGCAATGACTGGTGGATCGG...ATGCTCCACAAGCCCCTGCCTCACCTCACTGTCATCACTAATAAACATCATGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547230.5
CDS GCA 90 bp CTGGATTCTTCTGTATTGGAAGTTCCCAGACACTGCCCACTTTTGTaGCCTCACCCAGTTACGCAGTATTCCTTGTATCCCCCTCTTTCA +
Preference number: 5 (lower is better)
Translates to: LDSSVLEVPRHCPLL*PHPVTQYSLYPPLS
Trigger: TGAAAGAGGGGGATACAAGGAATACTGCGTAACTGGGTGAGGGCACAAAAGTGGGCAGTGTCTGGGAACTTCCAATACAGAAGAATCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000548860.5
ENST00000552465.1
CDS GCA 90 bp CCCTGGGTCACTTATCGGTGTTATCTTGGCAAGACAAAGAAGAGCTaGATCTTCAGACTGACATCTTTAGTCTGTCTACTGTGGGTGGCC +
Preference number: 5 (lower is better)
Translates to: PWVTYRCYLGKTKKS*IFRLTSLVCLLWVA
Trigger: GGCCACCCACAGTAGACAGACTAAAGATGTCAGTCTGAAGATGCAGCTCTTCTTTGTCTTGCCAAGATAACACCGATAAGTGACCCAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548860.5
CDS CCA 90 bp GTCTCCTCTCCTGAGTCCAGCACCAACTGGGGTTTGGTCATATACTaGATTCTTCTGTATTGGAAGTTCCCAGACACTGCCCACTTTTGT +
Preference number: 5 (lower is better)
Translates to: VSSPESSTNWGLVIY*ILLYWKFPDTAHFC
Trigger: ACAAAAGTGGGCAGTGTCTGGGAACTTCCAATACAGAAGAATCCAGTATATGACCAAACCCCAGTTGGTGCTGGACTCAGGAGAGGAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000548860.5
ENST00000552465.1
CDS GCA 90 bp ACCTGGGTCACTTATCGGTGTTATCTTGGCAAGACAAAGAAGAGCTaGATCTTCAGACTGACATCTTTAGTCTGTCTACTGTGGGTGGCC +
Preference number: 5 (lower is better)
Translates to: TWVTYRCYLGKTKKS*IFRLTSLVCLLWVA
Trigger: GGCCACCCACAGTAGACAGACTAAAGATGTCAGTCTGAAGATGCAGCTCTTCTTTGTCTTGCCAAGATAACACCGATAAGTGACCCAGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552465.1
CDS CCA 90 bp CCAAACCAAGTGGCTTCCCACCTGGGTCACTTATCGGTGTTATCTTaGCAAGACAAAGAAGAGCTGCATCTTCAGACTGACATCTTTAGT +
Preference number: 5 (lower is better)
Translates to: PNQVASHLGHLSVLS*QDKEELHLQTDIFS
Trigger: ACTAAAGATGTCAGTCTGAAGATGCAGCTCTTCTTTGTCTTGCCAAGATAACACCGATAAGTGACCCAGGTGGGAAGCCACTTGGTTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552465.1
CDS TCA 90 bp ATCTTAGATATGAGGGGTGGACAGGTGTGTGTTAAGGAGAAGAGCTaGTTAGCTTGGGGAATTAGACTGAGGATTCAAGTCAGAAGCATT +
Preference number: 5 (lower is better)
Translates to: ILDMRGGQVCVKEKS*LAWGIRLRIQVRSI
Trigger: AATGCTTCTGACTTGAATCCTCAGTCTAATTCCCCAAGCTAATCAGCTCTTCTCCTTAACACACACCTGTCCACCCCTCATATCTAAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000547693.5
ENST00000550771.5
ENST00000551716.5
CDS GCA 72 bp GCTCCGTGCGCCGGCCGCCCATCCTCCGGCGGCGGCTaGGACCCCGACCTCGGCGGGGGAAAGGACCGAAAA +
Preference number: 6 (lower is better)
Translates to: APCAGRPSSGGG*DPDLGGGKDRK
Trigger: TTTTCGGTCCTTTCCCCCGCCGAGGTCGGGGTCGCAGCCGCCGCCGGAGGATGGGCGGCCGGCGCACGGAGC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000548860.5
CDS GCA 72 bp GAGCTCTTGGCGGAAGCTTCTGCTCCCTCCCGGCCCTaGTCCGTGCGCCGGCCGCCCATCCTCCGGCGGCGG +
Preference number: 6 (lower is better)
Translates to: ELLAEASAPSRP*SVRRPPILRRR
Trigger: CCGCCGCCGGAGGATGGGCGGCCGGCGCACGGAGCAGGGCCGGGAGGGAGCAGAAGCTTCCGCCAAGAGCTC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548860.5
CDS CCA 72 bp CGCCGGGCTCCGCCGCCTGCTCCCTTCCCTCTCCCCTaGTTCCCTCCCTCTTTCTCCTCCCTCCTCCCTCCC +
Preference number: 6 (lower is better)
Translates to: RRAPPPAPFPLP*FPPSFSSLLPP
Trigger: GGGAGGGAGGAGGGAGGAGAAAGAGGGAGGGAACCAGGGGAGAGGGAAGGGAGCAGGCGGCGGAGCCCGGCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548860.5
CDS CCA 72 bp AGTCCTCAAACCCGGGCACGTAGGAGTCGTCATACATaGGGGAGTCCGGGTCGGGGGAGCGAGCGGCGCCGG +
Preference number: 6 (lower is better)
Translates to: SPQTRARRSRHT*GSPGRGSERRR
Trigger: CCGGCGCCGCTCGCTCCCCCGACCCGGACTCCCCCATGTATGACGACTCCTACGTGCCCGGGTTTGAGGACT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301050.7
ENST00000547392.5
ENST00000548279.5
ENST00000550771.5
CDS GCA 72 bp CCGACCTCGGCGGGGGAAAGGACCGAAAAGCAAGAGTaGTGGTGCTCTGCTCGCCCGCCCAAGCGTCAAGGC +
Preference number: 6 (lower is better)
Translates to: PTSAGERTEKQE*WCSARPPKRQG
Trigger: GCCTTGACGCTTGGGCGGGCGAGCAGAGCACCAGCACTCTTGCTTTTCGGTCCTTTCCCCCGCCGAGGTCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000548860.5
CDS GCA 72 bp GGGGGAAAGGACCGAAAAGCAAGAGTGCTGGTGCTCTaGTCGCCCGCCCAAGCGTCAAGGCGCCCATCCACC +
Preference number: 6 (lower is better)
Translates to: GGKDRKARVLVL*SPAQASRRPST
Trigger: GGTGGATGGGCGCCTTGACGCTTGGGCGGGCGAGCAGAGCACCAGCACTCTTGCTTTTCGGTCCTTTCCCCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000548860.5
CDS GCA 72 bp TCGGCGGGGGAAAGGACCGAAAAGCAAGAGTGCTGGTaGTCTGCTCGCCCGCCCAAGCGTCAAGGCGCCCAT +
Preference number: 6 (lower is better)
Translates to: SAGERTEKQECW*SARPPKRQGAH
Trigger: ATGGGCGCCTTGACGCTTGGGCGGGCGAGCAGAGCACCAGCACTCTTGCTTTTCGGTCCTTTCCCCCGCCGA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000548860.5
CDS GCA 72 bp CATCCCCACGTCGCACCCTCGCTCCTCGGCTTCCCCTaGCGCTCTGCTTCTTCCCTAAAGTCCTCCCGAGAA +
Preference number: 6 (lower is better)
Translates to: HPHVAPSLLGFP*RSASSLKSSRE
Trigger: TTCTCGGGAGGACTTTAGGGAAGAAGCAGAGCGGCAGGGGAAGCCGAGGAGCGAGGGTGCGACGTGGGGATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548860.5
CDS GCA 72 bp GTCCTGCCAGGATGGGGGTTCCCTTCCCCACTTCCCTaGCAAGGATTGTGCCAGACAGTGCCAAGGCATCCG +
Preference number: 6 (lower is better)
Translates to: VLPGWGFPSPLP*QGLCQTVPRHP
Trigger: CGGATGCCTTGGCACTGTCTGGCACAATCCTTGGCAGGGAAGTGGGGAAGGGAACCCCCATCCTGGCAGGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550064.5
CDS GCA 72 bp CGTCGCACCCTCGCTCCTCGGCTTCCCCTGCCGCTCTaGTTCTTCCCTAAAGTCCTCCCGAGAAAGAGTAGG +
Preference number: 6 (lower is better)
Translates to: RRTLAPRLPLPL*FFPKVLPRKSR
Trigger: CCTACTCTTTCTCGGGAGGACTTTAGGGAAGAAGCAGAGCGGCAGGGGAAGCCGAGGAGCGAGGGTGCGACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548860.5
CDS CAA 90 bp ATGGGGGAACATGTTCCGCCTAGAGATGGCGGAGGGGAGCGTCGGTaGCCAATGTCACTCAGGCTGGAAGGGTTCCCAGATCTCCTGGCC +
Preference number: 6 (lower is better)
Translates to: MGEHVPPRDGGGERR*PMSLRLEGFPDLLA
Trigger: GGCCAGGAGATCTGGGAACCCTTCCAGCCTGAGTGACATTGGCAACCGACGCTCCCCTCCGCCATCTCTAGGCGGAACATGTTCCCCCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000547818.5
ENST00000550391.5
ENST00000550483.5
CDS GCA 72 bp GGAGGCTACCTAGAGATGGCGGAGGGGAGCGTCGGTTaGCAATGTCACTCAGGCTGGAAGGGTTCCCAGATC +
Preference number: 6 (lower is better)
Translates to: GGYLEMAEGSVG*QCHSGWKGSQI
Trigger: GATCTGGGAACCCTTCCAGCCTGAGTGACATTGGCAACCGACGCTCCCCTCCGCCATCTCTAGGTAGCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000548860.5
ENST00000549226.5
CDS CCA 72 bp AGAAACCATGGCCCTGGTGCCTGTCTCATGCCTGGTTaGCGTCAGGGCAGATCCAGAGGTTCTGGGCTCCCT +
Preference number: 6 (lower is better)
Translates to: RNHGPGACLMPG*RQGRSRGSGLP
Trigger: AGGGAGCCCAGAACCTCTGGATCTGCCCTGACGCCAACCAGGCATGAGACAGGCACCAGGGCCATGGTTTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000548860.5
ENST00000549226.5
CDS CAA 72 bp GGGAGGCTACCTAGAGATGGCGGAGGGGAGCGTCGGTaGCCAATGTCACTCAGGCTGGAAGGGTTCCCAGAT +
Preference number: 6 (lower is better)
Translates to: GRLPRDGGGERR*PMSLRLEGFPD
Trigger: ATCTGGGAACCCTTCCAGCCTGAGTGACATTGGCAACCGACGCTCCCCTCCGCCATCTCTAGGTAGCCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000548860.5
ENST00000549226.5
CDS GCA 72 bp ATGTTCCGCCTAGAGATGGCGGAGGGGAGCGTCGGTTaGCAATGTCACTCAGGCTGGAAGGGTTCCCAGATC +
Preference number: 6 (lower is better)
Translates to: MFRLEMAEGSVG*QCHSGWKGSQI
Trigger: GATCTGGGAACCCTTCCAGCCTGAGTGACATTGGCAACCGACGCTCCCCTCCGCCATCTCTAGGCGGAACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000547818.5
ENST00000548874.5
ENST00000550391.5
ENST00000550483.5
CDS CAA 72 bp CATGTTCCGCCTAGAGATGGCGGAGGGGAGCGTCGGTaGCCAATGTCACTCAGGCTGGAAGGGTTCCCAGAT +
Preference number: 6 (lower is better)
Translates to: HVPPRDGGGERR*PMSLRLEGFPD
Trigger: ATCTGGGAACCCTTCCAGCCTGAGTGACATTGGCAACCGACGCTCCCCTCCGCCATCTCTAGGCGGAACATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000547818.5
ENST00000548874.5
ENST00000550391.5
ENST00000550483.5
CDS CAA 90 bp ATGGGGGAACATGTTCCGCCTAGAGATGGCGGAGGGGAGCGTCGGTaGCCAATGTCACTCAGGCTGGAAGGGTTCCCAGATCTCCTCTTT +
Preference number: 6 (lower is better)
Translates to: MGEHVPPRDGGGERR*PMSLRLEGFPDLLF
Trigger: AAAGAGGAGATCTGGGAACCCTTCCAGCCTGAGTGACATTGGCAACCGACGCTCCCCTCCGCCATCTCTAGGCGGAACATGTTCCCCCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000548874.5
CDS TCA 72 bp TCATTGCTGTACTTCTTGGCCCTTTCGAGCTGCTGCTaGGCCTGGCTCTCTACTTCACGCCGGGCACTCTCC +
Preference number: 6 (lower is better)
Translates to: SLLYFLALSSCC*AWLSTSRRALS
Trigger: GGAGAGTGCCCGGCGTGAAGTAGAGAGCCAGGCTCAGCAGCAGCTCGAAAGGGCCAAGAAGTACAGCAATGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547230.5
CDS GCA 72 bp AGGTCAGTAGAAACCATGGCCCTGGTGCCTGTCTCATaGCTGGTTGGCGTCAGGGCAGATCCAGAGGTTCTG +
Preference number: 6 (lower is better)
Translates to: RSVETMALVPVS*LVGVRADPEVL
Trigger: CAGAACCTCTGGATCTGCCCTGACGCCAACCAGGCATGAGACAGGCACCAGGGCCATGGTTTCTACTGACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000548860.5
ENST00000549226.5
CDS GCA 72 bp CTCTCCTGTCTAAGGTCCTCGTTCTGTTTTTCCGTGTaGCTCCCACTGTCCTTCCATCCCCACGTCGCACCC +
Preference number: 6 (lower is better)
Translates to: LSCLRSSFCFSV*LPLSFHPHVAP
Trigger: GGGTGCGACGTGGGGATGGAAGGACAGTGGGAGGCACACGGAAAAACAGAACGAGGACCTTAGACAGGAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000548860.5
CDS GCA 72 bp GGCCTGGAGAGGTGTCAAAGAGTAAGACCCTCAAGGTaGTCTTCTCCTGGGAGATGGCTCTCGTTCAGCAGG +
Preference number: 6 (lower is better)
Translates to: GLERCQRVRPSR*SSPGRWLSFSR
Trigger: CCTGCTGAACGAGAGCCATCTCCCAGGAGAAGAGCACCTTGAGGGTCTTACTCTTTGACACCTCTCCAGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000550168.5
ENST00000552465.1
CDS CCA 72 bp GCGGAGGGGAGCGTCGGTTGCCAATGTCACTCAGGCTaGAAGGGTTCCCAGATCTCCTCTTTAATGTGCAGA +
Preference number: 6 (lower is better)
Translates to: AEGSVGCQCHSG*KGSQISSLMCR
Trigger: TCTGCACATTAAAGAGGAGATCTGGGAACCCTTCCAGCCTGAGTGACATTGGCAACCGACGCTCCCCTCCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548874.5
CDS TCA 72 bp GAGGAGGGAGATGAGCCGTTGGATTTATTTAGAGCCTaGTCTCCCTCCTACTGCTTCAGAGGGGGCCTCAGG +
Preference number: 6 (lower is better)
Translates to: EEGDEPLDLFRA*SPSYCFRGGLR
Trigger: CCTGAGGCCCCCTCTGAAGCAGTAGGAGGGAGATCAGGCTCTAAATAAATCCAACGGCTCATCTCCCTCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000552812.1
CDS CCA 72 bp CCAGCCCCACAGAGAGGTTTGTTTTCAAGCTCACCTTaGCACCCTGGGCTATACCAGCTGTCCCTTCAACTG +
Preference number: 6 (lower is better)
Translates to: PAPQRGLFSSSP*HPGLYQLSLQL
Trigger: CAGTTGAAGGGACAGCTGGTATAGCCCAGGGTGCCAAGGTGAGCTTGAAAACAAACCTCTCTGTGGGGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552812.1
CDS CAA 72 bp TCCAGCCCCACAGAGAGGTTTGTTTTCAAGCTCACCTaGGCACCCTGGGCTATACCAGCTGTCCCTTCAACT +
Preference number: 6 (lower is better)
Translates to: SSPTERFVFKLT*APWAIPAVPST
Trigger: AGTTGAAGGGACAGCTGGTATAGCCCAGGGTGCCAAGGTGAGCTTGAAAACAAACCTCTCTGTGGGGCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552812.1
CDS CCA 72 bp GTGTCAAAGAGTAAGACCCTCAAGGTGCTCTTCTCCTaGGAGATGGCTCTCGTTCAGCAGGAAGGTTGCACT +
Preference number: 6 (lower is better)
Translates to: VSKSKTLKVLFS*EMALVQQEGCT
Trigger: AGTGCAACCTTCCTGCTGAACGAGAGCCATCTCCCAGGAGAAGAGCACCTTGAGGGTCTTACTCTTTGACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000550168.5
ENST00000552465.1
CDS CCA 72 bp CTGTGCATGGGAGAGAGAAAGCCCACCCAAACCAAGTaGCTTCCCACCTGGGTCACTTATCGGTGTTATCTT +
Preference number: 6 (lower is better)
Translates to: LCMGERKPTQTK*LPTWVTYRCYL
Trigger: AAGATAACACCGATAAGTGACCCAGGTGGGAAGCCACTTGGTTTGGGTGGGCTTTCTCTCTCCCATGCACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552465.1
CDS CAA 90 bp CCCCCTAAGTTCTCTTTAATGTGCAGAAAATCTTTGGCCTCAAAGTaGACTCCAGAGCCCTGGACTGGGCACTCCTCATCCAGTACGCCA +
Preference number: 6 (lower is better)
Translates to: PPKFSLMCRKSLASK*TPEPWTGHSSSSTP
Trigger: TGGCGTACTGGATGAGGAGTGCCCAGTCCAGGGCTCTGGAGTCAACTTTGAGGCCAAAGATTTTCTGCACATTAAAGAGAACTTAGGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550190.1
CDS CAA 90 bp TCCCAGATCTCCTCTTTAATGTGCAGAAAATCTTTGGCCTCAAAGTaGACTCCAGAGCCCTGGACTGGGCACTCCTCATCCAGTACGCCA +
Preference number: 6 (lower is better)
Translates to: SQISSLMCRKSLASK*TPEPWTGHSSSSTP
Trigger: TGGCGTACTGGATGAGGAGTGCCCAGTCCAGGGCTCTGGAGTCAACTTTGAGGCCAAAGATTTTCTGCACATTAAAGAGGAGATCTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548874.5
CDS TCA 72 bp CAGAAAGAGGTGTCCACCAGAGCCTTGAAAATGATCTaGTCTAGCGGCAATGTAATTAGCCCCAGAGGCCCC +
Preference number: 6 (lower is better)
Translates to: QKEVSTRALKMI*SSGNVISPRGP
Trigger: GGGGCCTCTGGGGCTAATTACATTGCCGCTAGATCAGATCATTTTCAAGGCTCTGGTGGACACCTCTTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552812.1
CDS CCA 72 bp GAGAGAAAGCCCACCCAAACCAAGTGGCTTCCCACCTaGGTCACTTATCGGTGTTATCTTGGCAAGACAAAG +
Preference number: 6 (lower is better)
Translates to: ERKPTQTKWLPT*VTYRCYLGKTK
Trigger: CTTTGTCTTGCCAAGATAACACCGATAAGTGACCCAGGTGGGAAGCCACTTGGTTTGGGTGGGCTTTCTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552465.1
CDS CAA 90 bp GTCCAGCACCAACTGGGGTTTGGTCATATACTGGATTCTTCTGTATaGGAAGTTCCCAGACACTGCCCACTTTTGTGCCCTCACCCAGTT +
Preference number: 6 (lower is better)
Translates to: VQHQLGFGHILDSSV*EVPRHCPLLCPHPV
Trigger: AACTGGGTGAGGGCACAAAAGTGGGCAGTGTCTGGGAACTTCCAATACAGAAGAATCCAGTATATGACCAAACCCCAGTTGGTGCTGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000548860.5
ENST00000552465.1
CDS CAA 90 bp GCTGAAGGGACTGTCTCCTCTCCTGAGTCCAGCACCAACTGGGGTTaGGTCATATACTGGATTCTTCTGTATTGGAAGTTCCCAGACACT +
Preference number: 6 (lower is better)
Translates to: AEGTVSSPESSTNWG*VIYWILLYWKFPDT
Trigger: AGTGTCTGGGAACTTCCAATACAGAAGAATCCAGTATATGACCAAACCCCAGTTGGTGCTGGACTCAGGAGAGGAGACAGTCCCTTCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000548860.5
ENST00000552465.1
CDS GCA 72 bp TCTGTATTGGAAGTTCCCAGACACTGCCCACTTTTGTaGCCTCACCCAGTTACGCAGTATTCCTTGTATCCC +
Preference number: 6 (lower is better)
Translates to: SVLEVPRHCPLL*PHPVTQYSLYP
Trigger: GGGATACAAGGAATACTGCGTAACTGGGTGAGGGCACAAAAGTGGGCAGTGTCTGGGAACTTCCAATACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000548860.5
ENST00000552465.1
CDS CCA 72 bp GAAGGGACTGTCTCCTCTCCTGAGTCCAGCACCAACTaGGGTTTGGTCATATACTGGATTCTTCTGTATTGG +
Preference number: 6 (lower is better)
Translates to: EGTVSSPESSTN*GLVIYWILLYW
Trigger: CCAATACAGAAGAATCCAGTATATGACCAAACCCCAGTTGGTGCTGGACTCAGGAGAGGAGACAGTCCCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000548860.5
ENST00000552465.1
CDS CCA 72 bp GTGGCTTCCCACCTGGGTCACTTATCGGTGTTATCTTaGCAAGACAAAGAAGAGCTGCATCTTCAGACTGAC +
Preference number: 6 (lower is better)
Translates to: VASHLGHLSVLS*QDKEELHLQTD
Trigger: GTCAGTCTGAAGATGCAGCTCTTCTTTGTCTTGCCAAGATAACACCGATAAGTGACCCAGGTGGGAAGCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552465.1
CDS CAA 90 bp TCATTGCTGTACTCTTTAATGTGCAGAAAATCTTTGGCCTCAAAGTaGACTCCAGAGCCCTGGACTGGGCACTCCTCATCCAGTACGCCA +
Preference number: 6 (lower is better)
Translates to: SLLYSLMCRKSLASK*TPEPWTGHSSSSTP
Trigger: TGGCGTACTGGATGAGGAGTGCCCAGTCCAGGGCTCTGGAGTCAACTTTGAGGCCAAAGATTTTCTGCACATTAAAGAGTACAGCAATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548279.5
CDS CCA 72 bp CTGTCTCCTCTCCTGAGTCCAGCACCAACTGGGGTTTaGTCATATACTGGATTCTTCTGTATTGGAAGTTCC +
Preference number: 6 (lower is better)
Translates to: LSPLLSPAPTGV*SYTGFFCIGSS
Trigger: GGAACTTCCAATACAGAAGAATCCAGTATATGACCAAACCCCAGTTGGTGCTGGACTCAGGAGAGGAGACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000548860.5
ENST00000552465.1
CDS CAA 90 bp ATACTGGATTCTTCTGTATTGGAAGTTCCCAGACACTGCCCACTTTaGTGCCCTCACCCAGTTACGCAGTATTCCTTGTATCCCCCTCTT +
Preference number: 6 (lower is better)
Translates to: ILDSSVLEVPRHCPL*CPHPVTQYSLYPPL
Trigger: AAGAGGGGGATACAAGGAATACTGCGTAACTGGGTGAGGGCACAAAAGTGGGCAGTGTCTGGGAACTTCCAATACAGAAGAATCCAGTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000548860.5
ENST00000552465.1
CDS CAA 72 bp CCACTTTTGTGCCCTCACCCAGTTACGCAGTATTCCTaGTATCCCCCTCTTTCATCCTTTCTCTTCAATTCC +
Preference number: 6 (lower is better)
Translates to: PLLCPHPVTQYS*YPPLSSFLFNS
Trigger: GGAATTGAAGAGAAAGGATGAAAGAGGGGGATACAAGGAATACTGCGTAACTGGGTGAGGGCACAAAAGTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000548860.5
ENST00000552465.1
CDS CAA 72 bp TCTTCTGTATTGGAAGTTCCCAGACACTGCCCACTTTaGTGCCCTCACCCAGTTACGCAGTATTCCTTGTAT +
Preference number: 6 (lower is better)
Translates to: SSVLEVPRHCPL*CPHPVTQYSLY
Trigger: ATACAAGGAATACTGCGTAACTGGGTGAGGGCACAAAAGTGGGCAGTGTCTGGGAACTTCCAATACAGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000548860.5
ENST00000552465.1
CDS CAA 72 bp CAACTGGGGTTTGGTCATATACTGGATTCTTCTGTATaGGAAGTTCCCAGACACTGCCCACTTTTGTGCCCT +
Preference number: 6 (lower is better)
Translates to: QLGFGHILDSSV*EVPRHCPLLCP
Trigger: AGGGCACAAAAGTGGGCAGTGTCTGGGAACTTCCAATACAGAAGAATCCAGTATATGACCAAACCCCAGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000548860.5
ENST00000552465.1
CDS CAA 72 bp ACTGTCTCCTCTCCTGAGTCCAGCACCAACTGGGGTTaGGTCATATACTGGATTCTTCTGTATTGGAAGTTC +
Preference number: 6 (lower is better)
Translates to: TVSSPESSTNWG*VIYWILLYWKF
Trigger: GAACTTCCAATACAGAAGAATCCAGTATATGACCAAACCCCAGTTGGTGCTGGACTCAGGAGAGGAGACAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000548860.5
ENST00000552465.1
CDS GCA 72 bp ACTTATCGGTGTTATCTTGGCAAGACAAAGAAGAGCTaGATCTTCAGACTGACATCTTTAGTCTGTCTACTG +
Preference number: 6 (lower is better)
Translates to: TYRCYLGKTKKS*IFRLTSLVCLL
Trigger: CAGTAGACAGACTAAAGATGTCAGTCTGAAGATGCAGCTCTTCTTTGTCTTGCCAAGATAACACCGATAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000548860.5
ENST00000552465.1