RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CACNB1 (Homo sapiens)

Ensembl gene IDs: ENSG00000067191

Ensembl transcript IDs: ENST00000344140.5, ENST00000394303.8, ENST00000394310.7, ENST00000492737.5, ENST00000536613.6, ENST00000539338.6, ENST00000577582.5, ENST00000577926.1, ENST00000582414.1, ENST00000582544.1, ENST00000582877.1, ENST00000622445.4

Found 572 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GTGCCCATCCCTGAGGCGGGCAGCCGGGCAGGCCCCAGTCCTTGTTaGCACACTCGGCTCTCTCTGGCCCAGCTGGGATGCTGGGGAGGG +
Preference number: 1 (lower is better)
Translates to: VPIPEAGSRAGPSPC*HTRLSLAQLGCWGG
Trigger: CCCTCCCCAGCATCCCAGCTGGGCCAGAGAGAGCCGAGTGTGCCAACAAGGACTGGGGCCTGCCCGGCTGCCCGCCTCAGGGATGGGCAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
3UTR CCA 90 bp CTGCACCCCACCCCCAGGTGGAGGGTGGGACATTGGCACAGGAGGTaGCGAGACAGGCATGAGGTGCCCATCCCTGAGGCGGGCAGCCGG +
Preference number: 1 (lower is better)
Translates to: LHPTPRWRVGHWHRR*RDRHEVPIPEAGSR
Trigger: CCGGCTGCCCGCCTCAGGGATGGGCACCTCATGCCTGTCTCGCCACCTCCTGTGCCAATGTCCCACCCTCCACCTGGGGGTGGGGTGCAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
3UTR GCA 90 bp GGGTGTCGGCATCAAAAGTGTCTTGGCGGGACAGTGCCCGTAGCGTaGCTGCCCGGCCTGGTGGGTGGCTGCTGGGGTAAAGGCCTGGGG +
Preference number: 1 (lower is better)
Translates to: GCRHQKCLGGTVPVA*LPGLVGGCWGKGLG
Trigger: CCCCAGGCCTTTACCCCAGCAGCCACCCACCAGGCCGGGCAGGCACGCTACGGGCACTGTCCCGCCAAGACACTTTTGATGCCGACACCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622445.4
3UTR CCA 90 bp TGGGGAGCAGCGTCTCGGCCGCTCACTCCTCAGGGTTCTGGGCCCTaGACGTTGCCATGGCCACGGAGGGTAGAGGGTGCTGTATGCCTG +
Preference number: 1 (lower is better)
Translates to: WGAASRPLTPQGSGP*TLPWPRRVEGAVCL
Trigger: CAGGCATACAGCACCCTCTACCCTCCGTGGCCATGGCAACGTCCAGGGCCCAGAACCCTGAGGAGTGAGCGGCCGAGACGCTGCTCCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
3UTR CCA 90 bp TGGGTACTCGTGCATGCTGGCGTGCTCCCCGGTGGCCCGTTCCAGTaGCTGGTCCCCGGAAGCAAGGTAGGGTCCCTGGAGGTTGGAGAC +
Preference number: 1 (lower is better)
Translates to: WVLVHAGVLPGGPFQ*LVPGSKVGSLEVGD
Trigger: GTCTCCAACCTCCAGGGACCCTACCTTGCTTCCGGGGACCAGCCACTGGAACGGGCCACCGGGGAGCACGCCAGCATGCACGAGTACCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622445.4
3UTR GCA 90 bp GGGCCCTGGACGTTGCCATGGCCACGGAGGGTAGAGGGTGCTGTATaGCTGCCAGCTTCCACCCAGAACCCTCCCCAAGACAAGCTCCCC +
Preference number: 1 (lower is better)
Translates to: GPWTLPWPRRVEGAV*LPASTQNPPQDKLP
Trigger: GGGGAGCTTGTCTTGGGGAGGGTTCTGGGTGGAAGCTGGCAGGCATACAGCACCCTCTACCCTCCGTGGCCATGGCAACGTCCAGGGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
3UTR CCA 90 bp TGCGGTTCAGCAGCGGATTGGGTGGCGTGCTGCTGGGCGGGTGTGTaGCCTTCCAATAGGCTTCCAAGTACTCCGCCAGATGCTCGCAGG +
Preference number: 1 (lower is better)
Translates to: CGSAADWVACCWAGV*PSNRLPSTPPDARR
Trigger: CCTGCGAGCATCTGGCGGAGTACTTGGAAGCCTATTGGAAGGCCACACACCCGCCCAGCAGCACGCCACCCAATCCGCTGCTGAACCGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622445.4
3UTR CCA 90 bp GCCTGCCAGCTTCCACCCAGAACCCTCCCCAAGACAAGCTCCCCATaGGGTGTCCATGCTATGGCTTTCACCGACCAGACGATGCTGCCA +
Preference number: 1 (lower is better)
Translates to: ACQLPPRTLPKTSSP*GVHAMAFTDQTMLP
Trigger: TGGCAGCATCGTCTGGTCGGTGAAAGCCATAGCATGGACACCCCATGGGGAGCTTGTCTTGGGGAGGGTTCTGGGTGGAAGCTGGCAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
3UTR TCA 90 bp CCTTTCAACTCCCCGTGCATATCAGCAGCTCCCAGGTGCCTACGCTaGCGACTATGTGGCGAGGACAAAGAAGCAGGCTTGGGAGGCAGC +
Preference number: 1 (lower is better)
Translates to: PFNSPCISAAPRCLR*RLCGEDKEAGLGGS
Trigger: GCTGCCTCCCAAGCCTGCTTCTTTGTCCTCGCCACATAGTCGTCAGCGTAGGCACCTGGGAGCTGCTGATATGCACGGGGAGTTGAAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
3UTR CCA 90 bp TGGTGTCTTCTAATCAGTAAGTGGAAGCTGCACCCCACCCCCAGGTaGAGGGTGGGACATTGGCACAGGAGGTGGCGAGACAGGCATGAG +
Preference number: 1 (lower is better)
Translates to: WCLLISKWKLHPTPR*RVGHWHRRWRDRHE
Trigger: CTCATGCCTGTCTCGCCACCTCCTGTGCCAATGTCCCACCCTCCACCTGGGGGTGGGGTGCAGCTTCCACTTACTGATTAGAAGACACCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
3UTR CCA 90 bp CCCGTGCATATCAGCAGCTCCCAGGTGCCTACGCTGACGACTATGTaGCGAGGACAAAGAAGCAGGCTTGGGAGGCAGCCACAAAGGACA +
Preference number: 1 (lower is better)
Translates to: PVHISSSQVPTLTTM*RGQRSRLGRQPQRT
Trigger: TGTCCTTTGTGGCTGCCTCCCAAGCCTGCTTCTTTGTCCTCGCCACATAGTCGTCAGCGTAGGCACCTGGGAGCTGCTGATATGCACGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
3UTR TCA 90 bp GGGATGGTAACACCAAAGAAACCCCAAGCTTTGAGCAAAGGCATCTaGAAGGAGGGAGACAGCGCCCCCTGGAGGCGAATACATGTCAGG +
Preference number: 1 (lower is better)
Translates to: GMVTPKKPQALSKGI*KEGDSAPWRRIHVR
Trigger: CCTGACATGTATTCGCCTCCAGGGGGCGCTGTCTCCCTCCTTTCAGATGCCTTTGCTCAAAGCTTGGGGTTTCTTTGGTGTTACCATCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
3UTR CCA 90 bp CTCAGGGCCAGTGTGGAGCTGGGACTGCCCAAGCAGCTCCTGGCTTaGGCACAATACATCAGAGGGCCAAAATCAAAGGATCATCTTTTC +
Preference number: 1 (lower is better)
Translates to: LRASVELGLPKQLLA*AQYIRGPKSKDHLF
Trigger: GAAAAGATGATCCTTTGATTTTGGCCCTCTGATGTATTGTGCCCAAGCCAGGAGCTGCTTGGGCAGTCCCAGCTCCACACTGGCCCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
3UTR CCA 90 bp GGTGCCTACGCTGACGACTATGTGGCGAGGACAAAGAAGCAGGCTTaGGAGGCAGCCACAAAGGACAGGACAGTGGTTTTATATATGGCA +
Preference number: 1 (lower is better)
Translates to: GAYADDYVARTKKQA*EAATKDRTVVLYMA
Trigger: TGCCATATATAAAACCACTGTCCTGTCCTTTGTGGCTGCCTCCCAAGCCTGCTTCTTTGTCCTCGCCACATAGTCGTCAGCGTAGGCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
3UTR-3UTR TCA 90 bp GCAGCCGGGCAGGCCCCAGTCCTTGTTGGCACACTCGGCTCTCTCTGGCCCAGCAAGGGGCAGGCAGGGTaGGGGACCTTGGATCTGGGG +
Preference number: 2 (lower is better)
Translates to: AAGQAPVLVGTLGSLWPSKGQAG*GTLDLG
Trigger: CCCCAGATCCAAGGTCCCTCACCCTGCCTGCCCCTT...GCTGGGCCAGAGAGAGCCGAGTGTGCCAACAAGGACTGGGGCCTGCCCGGCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
3UTR-3UTR TCA 90 bp TGCCCATCCCTGAGGCGGGCAGCCGGGCAGGCCCCAGTCCTTGTTGGCACACTCTCCAGAGCGACCAACTaGAGGGTCCGGGCCAGCTCG +
Preference number: 2 (lower is better)
Translates to: CPSLRRAAGQAPVLVGTLSRATN*RVRASS
Trigger: CGAGCTGGCCCGGACCCTTCAGTTGGTCGCTCTGGA...GAGTGTGCCAACAAGGACTGGGGCCTGCCCGGCTGCCCGCCTCAGGGATGGGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622445.4
3UTR-3UTR GCA 90 bp TGCCCATCCCTGAGGCGGGCAGCCGGGCAGGCCCCAGTCCTTGTTGGCACACTCGAGACAGGCATGAGGTaGCCATCCCTGAGGCGGGCA +
Preference number: 2 (lower is better)
Translates to: CPSLRRAAGQAPVLVGTLETGMR*PSLRRA
Trigger: TGCCCGCCTCAGGGATGGGCACCTCATGCCTGTCTC...GAGTGTGCCAACAAGGACTGGGGCCTGCCCGGCTGCCCGCCTCAGGGATGGGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
3UTR-3UTR CCA 90 bp AGGTGCCCATCCCTGAGGCGGGCAGCCGGGCAGGCCCCAGTCCTTGTTGGCACACAGGTGGCACAGGGATaGGGGGCTCAGATGCAGAGG +
Preference number: 2 (lower is better)
Translates to: RCPSLRRAAGQAPVLVGTQVAQG*GAQMQR
Trigger: CCTCTGCATCTGAGCCCCCCATCCCTGTGCCACCTG...TGTGCCAACAAGGACTGGGGCCTGCCCGGCTGCCCGCCTCAGGGATGGGCACCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
3UTR-3UTR CCA 90 bp TGCCCATCCCTGAGGCGGGCAGCCGGGCAGGCCCCAGTCCTTGTTGGCACACTCGCACCTCAGCCAGGCTaGAGCGTGTGTTGGAGCGCT +
Preference number: 2 (lower is better)
Translates to: CPSLRRAAGQAPVLVGTLAPQPG*SVCWSA
Trigger: AGCGCTCCAACACACGCTCCAGCCTGGCTGAGGTGC...GAGTGTGCCAACAAGGACTGGGGCCTGCCCGGCTGCCCGCCTCAGGGATGGGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622445.4
3UTR CAA 90 bp GCAGCGTCTCGGCCGCTCACTCCTCAGGGTTCTGGGCCCTGGACGTaGCCATGGCCACGGAGGGTAGAGGGTGCTGTATGCCTGCCAGCT +
Preference number: 2 (lower is better)
Translates to: AASRPLTPQGSGPWT*PWPRRVEGAVCLPA
Trigger: AGCTGGCAGGCATACAGCACCCTCTACCCTCCGTGGCCATGGCAACGTCCAGGGCCCAGAACCCTGAGGAGTGAGCGGCCGAGACGCTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
3UTR-3UTR GCA 90 bp AAACTGGACCCCCACCCTCAGCGCAGTAGCGGGCCTTATTCCGGCCCCGGTTCCTCCCCTGGGTACTCGTaGATGCTGGCGTGCTCCCCG +
Preference number: 2 (lower is better)
Translates to: KLDPHPQRSSGPYSGPGSSPGYS*MLACSP
Trigger: CGGGGAGCACGCCAGCATGCACGAGTACCCAGGGGA...GGAACCGGGGCCGGAATAAGGCCCGCTACTGCGCTGAGGGTGGGGGTCCAGTTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000622445.4
3UTR-3UTR CCA 90 bp AGGTGCCCATCCCTGAGGCGGGCAGCCGGGCAGGCCCCAGTCCTTGTTGGCACACTTGGATCTGGGGTCTaGGGAAGAGAGCCCCCATGG +
Preference number: 2 (lower is better)
Translates to: RCPSLRRAAGQAPVLVGTLGSGV*GREPPW
Trigger: CCATGGGGGCTCTCTTCCCCAGACCCCAGATCCAAG...TGTGCCAACAAGGACTGGGGCCTGCCCGGCTGCCCGCCTCAGGGATGGGCACCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
3UTR-3UTR CCA 90 bp TGCCCATCCCTGAGGCGGGCAGCCGGGCAGGCCCCAGTCCTTGTTGGCACACTCCTTGGATCTGGGGTCTaGGGAAGAGAGCCCCCATGG +
Preference number: 2 (lower is better)
Translates to: CPSLRRAAGQAPVLVGTLLGSGV*GREPPW
Trigger: CCATGGGGGCTCTCTTCCCCAGACCCCAGATCCAAG...GAGTGTGCCAACAAGGACTGGGGCCTGCCCGGCTGCCCGCCTCAGGGATGGGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
3UTR-3UTR GCA 90 bp CGGGCAGGCCCCAGTCCTTGTTGGCACACTCGGCTCTCTCTGGCCCAGCTGGGATCACCGACCAGACGATaGTGCCAGGAAGCTGGGAGG +
Preference number: 2 (lower is better)
Translates to: RAGPSPCWHTRLSLAQLGSPTRR*CQEAGR
Trigger: CCTCCCAGCTTCCTGGCAGCATCGTCTGGTCGGTGA...TCCCAGCTGGGCCAGAGAGAGCCGAGTGTGCCAACAAGGACTGGGGCCTGCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
3UTR-3UTR GCA 90 bp GCAGCCGGGCAGGCCCCAGTCCTTGTTGGCACACTCGGCTCTCTCTGGCCCAGCGTAGAGGGTGCTGTATaGCTGCCAGCTTCCACCCAG +
Preference number: 2 (lower is better)
Translates to: AAGQAPVLVGTLGSLWPSVEGAV*LPASTQ
Trigger: CTGGGTGGAAGCTGGCAGGCATACAGCACCCTCTAC...GCTGGGCCAGAGAGAGCCGAGTGTGCCAACAAGGACTGGGGCCTGCCCGGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
3UTR-3UTR GCA 90 bp GCAGCCGGGCAGGCCCCAGTCCTTGTTGGCACACTCGGCTCTCTCTGGCCCAGCCGCTCGATTTCACTCTaGACCTCAGCCAGGCTGGAG +
Preference number: 2 (lower is better)
Translates to: AAGQAPVLVGTLGSLWPSRSISL*TSARLE
Trigger: CTCCAGCCTGGCTGAGGTGCAGAGTGAAATCGAGCG...GCTGGGCCAGAGAGAGCCGAGTGTGCCAACAAGGACTGGGGCCTGCCCGGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622445.4
3UTR-3UTR GCA 90 bp CGCAGTAGCGGGCCTTATTCCGGCCCCGGTTCCGGTTGTCGGTCAGCTCTTCCTCTGGGTACTCGTGCATaGTGGCGTGCTCCCCGGTGG +
Preference number: 2 (lower is better)
Translates to: RSSGPYSGPGSGCRSALPLGTRA*WRAPRW
Trigger: CCACCGGGGAGCACGCCAGCATGCACGAGTACCCAG...AGGAAGAGCTGACCGACAACCGGAACCGGGGCCGGAATAAGGCCCGCTACTGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622445.4
3UTR-3UTR CCA 90 bp CCCCTGCCTCTCAGCGAATGTAGACGCCTCGTCCCCAGCCCTCCAGCTCATTCTGGTACTCGTGCATGCTaGCGTGCTCCCCGGTGGCCC +
Preference number: 2 (lower is better)
Translates to: PLPLSECRRLVPSPPAHSGTRAC*RAPRWP
Trigger: GGGCCACCGGGGAGCACGCCAGCATGCACGAGTACC...AGAATGAGCTGGAGGGCTGGGGACGAGGCGTCTACATTCGCTGAGAGGCAGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000622445.4
3UTR-3UTR TCA 90 bp GAGGGGCAGGGTTGCTGGGCTACAGGGATGCCAAGGCAAAGGGATGCCCCAGGGAATACATGTCAGGTGTaGGCCCCTCGCTCCCTCCCC +
Preference number: 2 (lower is better)
Translates to: EGQGCWATGMPRQRDAPGNTCQV*APRSLP
Trigger: GGGGAGGGAGCGAGGGGCTCACACCTGACATGTATT...CCCTGGGGCATCCCTTTGCCTTGGCATCCCTGTAGCCCAGCAACCCTGCCCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
3UTR-3UTR GCA 90 bp AGGTGCCCATCCCTGAGGCGGGCAGCCGGGCAGGCCCCAGTCCTTGTTGGCACACCCATGGGGTGTCCATaGTATGGCTTTCACCGACCA +
Preference number: 2 (lower is better)
Translates to: RCPSLRRAAGQAPVLVGTPMGCP*YGFHRP
Trigger: TGGTCGGTGAAAGCCATAGCATGGACACCCCATGGG...TGTGCCAACAAGGACTGGGGCCTGCCCGGCTGCCCGCCTCAGGGATGGGCACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
3UTR-3UTR GCA 90 bp GGGTCTGGGGAAGAGAGCCCCCATGGGAAAGAATCTGTGGCCTCCCTTTCCAGGTCGTGCATGCTGGCGTaGTCCCCGGTGGCCCGTTCC +
Preference number: 2 (lower is better)
Translates to: GSGEESPHGKESVASLSRSCMLA*SPVARS
Trigger: GGAACGGGCCACCGGGGAGCACGCCAGCATGCACGA...CCTGGAAAGGGAGGCCACAGATTCTTTCCCATGGGGGCTCTCTTCCCCAGACCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000622445.4
3UTR-3UTR GCA 90 bp AGGTGCCCATCCCTGAGGCGGGCAGCCGGGCAGGCCCCAGTCCTTGTTGGCACACCAGCTCATTCTTGTTaGGCCCCAAAACTGGACCCC +
Preference number: 2 (lower is better)
Translates to: RCPSLRRAAGQAPVLVGTPAHSC*APKLDP
Trigger: GGGGTCCAGTTTTGGGGCGCAACAAGAATGAGCTGG...TGTGCCAACAAGGACTGGGGCCTGCCCGGCTGCCCGCCTCAGGGATGGGCACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000622445.4
3UTR-3UTR CCA 90 bp GAGGGAGACAGCGCCCCCTGGAGGCGAATACATGTCAGGTGTGAGCCCCTCGCTGAGGGGCAGGGTTGCTaGGCTACAGGGATGCCAAGG +
Preference number: 2 (lower is better)
Translates to: EGDSAPWRRIHVRCEPLAEGQGC*ATGMPR
Trigger: CCTTGGCATCCCTGTAGCCCAGCAACCCTGCCCCTC...AGCGAGGGGCTCACACCTGACATGTATTCGCCTCCAGGGGGCGCTGTCTCCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
3UTR-3UTR CCA 90 bp CCGTGTAGGCAGAGTTTCGGCTGCCGGGGGTGTCGGCATCAAAAGTGTCTTGGCTGGGTGGCGTGCTGCTaGGCGGGTGTGTGGCCTTCC +
Preference number: 2 (lower is better)
Translates to: PCRQSFGCRGCRHQKCLGWVACC*AGVWPS
Trigger: GGAAGGCCACACACCCGCCCAGCAGCACGCCACCCA...GCCAAGACACTTTTGATGCCGACACCCCCGGCAGCCGAAACTCTGCCTACACGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000622445.4
3UTR-3UTR GCA 90 bp CCGTGTAGGCAGAGTTTCGGCTGCCGGGGGTGTCGGCATCAAAAGTGTCTTGGCGCTGGCAGCCAGGGCTaGGGTAGCCATGGTGCGGTT +
Preference number: 2 (lower is better)
Translates to: PCRQSFGCRGCRHQKCLGAGSQG*GSHGAV
Trigger: AACCGCACCATGGCTACCGCAGCCCTGGCTGCCAGC...GCCAAGACACTTTTGATGCCGACACCCCCGGCAGCCGAAACTCTGCCTACACGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000622445.4
3UTR-3UTR CCA 90 bp TGCCCATCCCTGAGGCGGGCAGCCGGGCAGGCCCCAGTCCTTGTTGGCACACTCACAAAGAAGCAGGCTTaGGAGGCAGCCACAAAGGAC +
Preference number: 2 (lower is better)
Translates to: CPSLRRAAGQAPVLVGTLTKKQA*EAATKD
Trigger: GTCCTTTGTGGCTGCCTCCCAAGCCTGCTTCTTTGT...GAGTGTGCCAACAAGGACTGGGGCCTGCCCGGCTGCCCGCCTCAGGGATGGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
3UTR-3UTR CCA 90 bp CCTCTGAGGGGTCAGTCTCCATGTCCACACATGAGTCTCCCAGCTCCGTGTAGGCAGCAGCGGATTGGGTaGCGTGCTGCTGGGCGGGTG +
Preference number: 2 (lower is better)
Translates to: PLRGQSPCPHMSLPAPCRQQRIG*RAAGRV
Trigger: CACCCGCCCAGCAGCACGCCACCCAATCCGCTGCTG...CCTACACGGAGCTGGGAGACTCATGTGTGGACATGGAGACTGACCCCTCAGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622445.4
3UTR-3UTR CCA 90 bp GGGTCTGGGGAAGAGAGCCCCCATGGGAAAGAATCTGTGGCCTCCCTTTCCAGGCTGGTGGGTGGCTGCTaGGGTAAAGGCCTGGGGGCT +
Preference number: 2 (lower is better)
Translates to: GSGEESPHGKESVASLSRLVGGC*GKGLGA
Trigger: AGCCCCCAGGCCTTTACCCCAGCAGCCACCCACCAG...CCTGGAAAGGGAGGCCACAGATTCTTTCCCATGGGGGCTCTCTTCCCCAGACCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000622445.4
3UTR-3UTR TCA 90 bp TGCCCATCCCTGAGGCGGGCAGCCGGGCAGGCCCCAGTCCTTGTTGGCACACTCCTCTCCTGGGGGAAGTaGACATGGGTAACAAACAGA +
Preference number: 2 (lower is better)
Translates to: CPSLRRAAGQAPVLVGTLLSWGK*TWVTNR
Trigger: TCTGTTTGTTACCCATGTTCACTTCCCCCAGGAGAG...GAGTGTGCCAACAAGGACTGGGGCCTGCCCGGCTGCCCGCCTCAGGGATGGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
3UTR-3UTR TCA 90 bp TGCCCATCCCTGAGGCGGGCAGCCGGGCAGGCCCCAGTCCTTGTTGGCACACTCGACTTGATGAGCCTTTaGAGTACCTTGGGAGAGGTG +
Preference number: 2 (lower is better)
Translates to: CPSLRRAAGQAPVLVGTLDLMSL*STLGEV
Trigger: CACCTCTCCCAAGGTACTTCAAAGGCTCATCAAGTC...GAGTGTGCCAACAAGGACTGGGGCCTGCCCGGCTGCCCGCCTCAGGGATGGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622445.4
3UTR-3UTR TCA 90 bp GCAGCCGGGCAGGCCCCAGTCCTTGTTGGCACACTCGGCTCTCTCTGGCCCAGCTTGAGGTGTTTGGACTaGGACTTTCCTCGGGACTTG +
Preference number: 2 (lower is better)
Translates to: AAGQAPVLVGTLGSLWPSLRCLD*DFPRDL
Trigger: CAAGTCCCGAGGAAAGTCTCAGTCCAAACACCTCAA...GCTGGGCCAGAGAGAGCCGAGTGTGCCAACAAGGACTGGGGCCTGCCCGGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622445.4
3UTR-3UTR GCA 90 bp GAGGGAGACAGCGCCCCCTGGAGGCGAATACATGTCAGGTGTGAGCCCCTCGCTAGGGTGCTGTATGCCTaGCAGCTTCCACCCAGAACC +
Preference number: 2 (lower is better)
Translates to: EGDSAPWRRIHVRCEPLARVLYA*QLPPRT
Trigger: GGTTCTGGGTGGAAGCTGGCAGGCATACAGCACCCT...AGCGAGGGGCTCACACCTGACATGTATTCGCCTCCAGGGGGCGCTGTCTCCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
3UTR-3UTR GCA 90 bp GGGTCTGGGGAAGAGAGCCCCCATGGGAAAGAATCTGTGGCCTCCCTTTCCAGGGCCAAGGCAAAGGGATaGCCCAGGGGAGAGGGGGTA +
Preference number: 2 (lower is better)
Translates to: GSGEESPHGKESVASLSRAKAKG*PRGEGV
Trigger: TACCCCCTCTCCCCTGGGGCATCCCTTTGCCTTGGC...CCTGGAAAGGGAGGCCACAGATTCTTTCCCATGGGGGCTCTCTTCCCCAGACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
3UTR-3UTR CCA 90 bp CGCAGTAGCGGGCCTTATTCCGGCCCCGGTTCCGGTTGTCGGTCAGCTCTTCCTTGCTGGGCGGGTGTGTaGCCTTCCAATAGGCTTCCA +
Preference number: 2 (lower is better)
Translates to: RSSGPYSGPGSGCRSALPCWAGV*PSNRLP
Trigger: TGGAAGCCTATTGGAAGGCCACACACCCGCCCAGCA...AGGAAGAGCTGACCGACAACCGGAACCGGGGCCGGAATAAGGCCCGCTACTGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622445.4
3UTR-3UTR CCA 90 bp GGTGCCTACGCTGACGACTATGTGGCGAGGACAAAGAAGCAGGCTTGGGAGGCACTGGCCCAGCTCCCCTaGGTACTCGTGCATGCTGGC +
Preference number: 2 (lower is better)
Translates to: GAYADDYVARTKKQAWEALAQLP*VLVHAG
Trigger: GCCAGCATGCACGAGTACCCAGGGGAGCTGGGCCAG...TGCCTCCCAAGCCTGCTTCTTTGTCCTCGCCACATAGTCGTCAGCGTAGGCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622445.4
3UTR-3UTR TCA 90 bp GCCACGGAGGGTAGAGGGTGCTGTATGCCTGCCAGCTTCCACCCAGAACCCTCCTTGAGCAAAGGCATCTaGAAGGAGGGAGACAGCGCC +
Preference number: 2 (lower is better)
Translates to: ATEGRGCCMPASFHPEPSLSKGI*KEGDSA
Trigger: GGCGCTGTCTCCCTCCTTTCAGATGCCTTTGCTCAA...GGAGGGTTCTGGGTGGAAGCTGGCAGGCATACAGCACCCTCTACCCTCCGTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
3UTR-3UTR GCA 90 bp AACCGACAGCTGGGGCTTAAGGGCCTCCCGGGAGCTGGGATGGTAACACCAAAGGCTGGGCTACAGGGATaGCAAGGCAAAGGGATGCCC +
Preference number: 2 (lower is better)
Translates to: NRQLGLKGLPGAGMVTPKAGLQG*QGKGMP
Trigger: GGGCATCCCTTTGCCTTGGCATCCCTGTAGCCCAGC...CTTTGGTGTTACCATCCCAGCTCCCGGGAGGCCCTTAAGCCCCAGCTGTCGGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
3UTR-3UTR CCA 90 bp GCCACGGAGGGTAGAGGGTGCTGTATGCCTGCCAGCTTCCACCCAGAACCCTCCGGGGTGTCCATGCTATaGCTTTCACCGACCAGACGA +
Preference number: 2 (lower is better)
Translates to: ATEGRGCCMPASFHPEPSGVSML*LSPTRR
Trigger: TCGTCTGGTCGGTGAAAGCCATAGCATGGACACCCC...GGAGGGTTCTGGGTGGAAGCTGGCAGGCATACAGCACCCTCTACCCTCCGTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
3UTR-3UTR TCA 90 bp GGTGCCTACGCTGACGACTATGTGGCGAGGACAAAGAAGCAGGCTTGGGAGGCAAATACATGTCAGGTGTaGGCCCCTCGCTCCCTCCCC +
Preference number: 2 (lower is better)
Translates to: GAYADDYVARTKKQAWEANTCQV*APRSLP
Trigger: GGGGAGGGAGCGAGGGGCTCACACCTGACATGTATT...TGCCTCCCAAGCCTGCTTCTTTGTCCTCGCCACATAGTCGTCAGCGTAGGCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
3UTR-3UTR TCA 90 bp CATATCAGCAGCTCCCAGGTGCCTACGCTGACGACTATGTGGCGAGGACAAAGAAAGGGGCAGGCAGGGTaGGGGACCTTGGATCTGGGG +
Preference number: 2 (lower is better)
Translates to: HISSSQVPTLTTMWRGQRKGQAG*GTLDLG
Trigger: CCCCAGATCCAAGGTCCCTCACCCTGCCTGCCCCTT...TCTTTGTCCTCGCCACATAGTCGTCAGCGTAGGCACCTGGGAGCTGCTGATATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
3UTR-3UTR TCA 90 bp GAGGGGCAGGGTTGCTGGGCTACAGGGATGCCAAGGCAAAGGGATGCCCCAGGGCTCTCCTGGGGGAAGTaGACATGGGTAACAAACAGA +
Preference number: 2 (lower is better)
Translates to: EGQGCWATGMPRQRDAPGLSWGK*TWVTNR
Trigger: TCTGTTTGTTACCCATGTTCACTTCCCCCAGGAGAG...CCCTGGGGCATCCCTTTGCCTTGGCATCCCTGTAGCCCAGCAACCCTGCCCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
3UTR-3UTR GCA 90 bp GGGTCTGGGGAAGAGAGCCCCCATGGGAAAGAATCTGTGGCCTCCCTTTCCAGGACGGAGGGTAGAGGGTaGTGTATGCCTGCCAGCTTC +
Preference number: 2 (lower is better)
Translates to: GSGEESPHGKESVASLSRTEGRG*CMPASF
Trigger: GAAGCTGGCAGGCATACAGCACCCTCTACCCTCCGT...CCTGGAAAGGGAGGCCACAGATTCTTTCCCATGGGGGCTCTCTTCCCCAGACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
3UTR-3UTR GCA 90 bp AACCGACAGCTGGGGCTTAAGGGCCTCCCGGGAGCTGGGATGGTAACACCAAAGTCAGTAAGTGGAAGCTaGACCCCACCCCCAGGTGGA +
Preference number: 2 (lower is better)
Translates to: NRQLGLKGLPGAGMVTPKSVSGS*TPPPGG
Trigger: TCCACCTGGGGGTGGGGTGCAGCTTCCACTTACTGA...CTTTGGTGTTACCATCCCAGCTCCCGGGAGGCCCTTAAGCCCCAGCTGTCGGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
3UTR-3UTR CCA 90 bp ATCCACAACAGGCAGGTAAAAACCGACAGCTGGGGCTTAAGGGCCTCCCGGGAGGGAGACAGCGCCCCCTaGAGGCGAATACATGTCAGG +
Preference number: 2 (lower is better)
Translates to: IHNRQVKTDSWGLRASREGDSAP*RRIHVR
Trigger: CCTGACATGTATTCGCCTCCAGGGGGCGCTGTCTCC...CTCCCGGGAGGCCCTTAAGCCCCAGCTGTCGGTTTTTACCTGCCTGTTGTGGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
3UTR-3UTR CCA 90 bp GGTGCCTACGCTGACGACTATGTGGCGAGGACAAAGAAGCAGGCTTGGGAGGCAGGAGACAGCGCCCCCTaGAGGCGAATACATGTCAGG +
Preference number: 2 (lower is better)
Translates to: GAYADDYVARTKKQAWEAGDSAP*RRIHVR
Trigger: CCTGACATGTATTCGCCTCCAGGGGGCGCTGTCTCC...TGCCTCCCAAGCCTGCTTCTTTGTCCTCGCCACATAGTCGTCAGCGTAGGCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
3UTR-3UTR CCA 90 bp CCGTGTAGGCAGAGTTTCGGCTGCCGGGGGTGTCGGCATCAAAAGTGTCTTGGCGGGCCTCCCGGGAGCTaGGATGGTAACACCAAAGAA +
Preference number: 2 (lower is better)
Translates to: PCRQSFGCRGCRHQKCLGGPPGS*DGNTKE
Trigger: TTCTTTGGTGTTACCATCCCAGCTCCCGGGAGGCCC...GCCAAGACACTTTTGATGCCGACACCCCCGGCAGCCGAAACTCTGCCTACACGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000622445.4
3UTR-3UTR CCA 90 bp GGAGGGGCAGGGTTGCTGGGCTACAGGGATGCCAAGGCAAAGGGATGCCCCAGGGAGAGCCCCTTAAGATaGGAGAAAGGGGACACTTCA +
Preference number: 2 (lower is better)
Translates to: GGAGLLGYRDAKAKGCPRESPLR*EKGDTS
Trigger: TGAAGTGTCCCCTTTCTCCCATCTTAAGGGGCTCTC...CCTGGGGCATCCCTTTGCCTTGGCATCCCTGTAGCCCAGCAACCCTGCCCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
3UTR-3UTR CCA 90 bp GCAGCCGGGCAGGCCCCAGTCCTTGTTGGCACACTCGGCTCTCTCTGGCCCAGCATGGGAAAGAATCTGTaGCCTCCCTTTCCAGGAAAA +
Preference number: 2 (lower is better)
Translates to: AAGQAPVLVGTLGSLWPSMGKNL*PPFPGK
Trigger: TTTTCCTGGAAAGGGAGGCCACAGATTCTTTCCCAT...GCTGGGCCAGAGAGAGCCGAGTGTGCCAACAAGGACTGGGGCCTGCCCGGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
3UTR-3UTR CCA 90 bp AACCGACAGCTGGGGCTTAAGGGCCTCCCGGGAGCTGGGATGGTAACACCAAAGGGCCAAGCTCATTCCTaGGGTAGGCAAAGGCTGAGG +
Preference number: 2 (lower is better)
Translates to: NRQLGLKGLPGAGMVTPKGQAHS*GRQRLR
Trigger: CCTCAGCCTTTGCCTACCCCAGGAATGAGCTTGGCC...CTTTGGTGTTACCATCCCAGCTCCCGGGAGGCCCTTAAGCCCCAGCTGTCGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
3UTR-3UTR CCA 90 bp CCTCTGAGGGGTCAGTCTCCATGTCCACACATGAGTCTCCCAGCTCCGTGTAGGGACCAGAGTGTTCCATaGGCTCCACACCCAGGTGGC +
Preference number: 2 (lower is better)
Translates to: PLRGQSPCPHMSLPAPCRDQSVP*APHPGG
Trigger: GCCACCTGGGTGTGGAGCCCATGGAACACTCTGGTC...CCTACACGGAGCTGGGAGACTCATGTGTGGACATGGAGACTGACCCCTCAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622445.4
3UTR-3UTR GCA 90 bp CCCATCCATCCACAACAGGCAGGTAAAAACCGACAGCTGGGGCTTAAGGGCCTCTCACCGACCAGACGATaGTGCCAGGAAGCTGGGAGG +
Preference number: 2 (lower is better)
Translates to: PIHPQQAGKNRQLGLKGLSPTRR*CQEAGR
Trigger: CCTCCCAGCTTCCTGGCAGCATCGTCTGGTCGGTGA...GAGGCCCTTAAGCCCCAGCTGTCGGTTTTTACCTGCCTGTTGTGGATGGATGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
3UTR-3UTR GCA 90 bp GGTGCCTACGCTGACGACTATGTGGCGAGGACAAAGAAGCAGGCTTGGGAGGCAGTAGAGGGTGCTGTATaGCTGCCAGCTTCCACCCAG +
Preference number: 2 (lower is better)
Translates to: GAYADDYVARTKKQAWEAVEGAV*LPASTQ
Trigger: CTGGGTGGAAGCTGGCAGGCATACAGCACCCTCTAC...TGCCTCCCAAGCCTGCTTCTTTGTCCTCGCCACATAGTCGTCAGCGTAGGCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
3UTR-3UTR GCA 90 bp GGTGCCTACGCTGACGACTATGTGGCGAGGACAAAGAAGCAGGCTTGGGAGGCAACGGAGGGTAGAGGGTaGTGTATGCCTGCCAGCTTC +
Preference number: 2 (lower is better)
Translates to: GAYADDYVARTKKQAWEATEGRG*CMPASF
Trigger: GAAGCTGGCAGGCATACAGCACCCTCTACCCTCCGT...TGCCTCCCAAGCCTGCTTCTTTGTCCTCGCCACATAGTCGTCAGCGTAGGCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
3UTR-3UTR GCA 90 bp CATATCAGCAGCTCCCAGGTGCCTACGCTGACGACTATGTGGCGAGGACAAAGAGAGACAGGCATGAGGTaGCCATCCCTGAGGCGGGCA +
Preference number: 2 (lower is better)
Translates to: HISSSQVPTLTTMWRGQRETGMR*PSLRRA
Trigger: TGCCCGCCTCAGGGATGGGCACCTCATGCCTGTCTC...TCTTTGTCCTCGCCACATAGTCGTCAGCGTAGGCACCTGGGAGCTGCTGATATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
3UTR-3UTR CCA 90 bp GGTCTGGGGAAGAGAGCCCCCATGGGAAAGAATCTGTGGCCTCCCTTTCCAGGACCCAGTACTGCAGCTTaGGAGAAGGAGAGCCATCCC +
Preference number: 2 (lower is better)
Translates to: GLGKRAPMGKNLWPPFPGPSTAA*EKESHP
Trigger: GGGATGGCTCTCCTTCTCCCAAGCTGCAGTACTGGG...TCCTGGAAAGGGAGGCCACAGATTCTTTCCCATGGGGGCTCTCTTCCCCAGACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
3UTR-3UTR CCA 90 bp CTCAGGGCACAACATCTTCAGGCACCCACCCTTTCAACTCCCCGTGCATATCAGCAGGTGGCACAGGGATaGGGGGCTCAGATGCAGAGG +
Preference number: 2 (lower is better)
Translates to: LRAQHLQAPTLSTPRAYQQVAQG*GAQMQR
Trigger: CCTCTGCATCTGAGCCCCCCATCCCTGTGCCACCTG...CTGATATGCACGGGGAGTTGAAAGGGTGGGTGCCTGAAGATGTTGTGCCCTGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
3UTR-3UTR TCA 90 bp AAGACAAGCTCCCCATGGGGTGTCCATGCTATGGCTTTCACCGACCAGACGATGACGGTCCCACCAGGATaGTGGGCCTCATGGAAGGCA +
Preference number: 2 (lower is better)
Translates to: KTSSPWGVHAMAFTDQTMTVPPG*WASWKA
Trigger: TGCCTTCCATGAGGCCCATCATCCTGGTGGGACCGT...CATCGTCTGGTCGGTGAAAGCCATAGCATGGACACCCCATGGGGAGCTTGTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622445.4
3UTR-3UTR CCA 90 bp TATCAGCAGCTCCCAGGTGCCTACGCTGACGACTATGTGGCGAGGACAAAGAAGGAGGGACCTTGGATCTaGGGTCTGGGGAAGAGAGCC +
Preference number: 2 (lower is better)
Translates to: YQQLPGAYADDYVARTKKEGPWI*GLGKRA
Trigger: GGCTCTCTTCCCCAGACCCCAGATCCAAGGTCCCTC...CTTCTTTGTCCTCGCCACATAGTCGTCAGCGTAGGCACCTGGGAGCTGCTGATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
3UTR-3UTR CCA 90 bp AACCGACAGCTGGGGCTTAAGGGCCTCCCGGGAGCTGGGATGGTAACACCAAAGAAGACAAGCTCCCCATaGGGTGTCCATGCTATGGCT +
Preference number: 2 (lower is better)
Translates to: NRQLGLKGLPGAGMVTPKKTSSP*GVHAMA
Trigger: AGCCATAGCATGGACACCCCATGGGGAGCTTGTCTT...CTTTGGTGTTACCATCCCAGCTCCCGGGAGGCCCTTAAGCCCCAGCTGTCGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
3UTR-3UTR TCA 90 bp GGTCTGGGGAAGAGAGCCCCCATGGGAAAGAATCTGTGGCCTCCCTTTCCAGGAGGGGTTGTTGAGAACTaGGCGCTTAGCCAGGGAAAT +
Preference number: 2 (lower is better)
Translates to: GLGKRAPMGKNLWPPFPGGVVEN*ALSQGN
Trigger: ATTTCCCTGGCTAAGCGCTCAGTTCTCAACAACCCC...TCCTGGAAAGGGAGGCCACAGATTCTTTCCCATGGGGGCTCTCTTCCCCAGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000622445.4
3UTR-3UTR CCA 90 bp TATCAGCAGCTCCCAGGTGCCTACGCTGACGACTATGTGGCGAGGACAAAGAAGGTAAAAACCGACAGCTaGGGCTTAAGGGCCTCCCGG +
Preference number: 2 (lower is better)
Translates to: YQQLPGAYADDYVARTKKVKTDS*GLRASR
Trigger: CCGGGAGGCCCTTAAGCCCCAGCTGTCGGTTTTTAC...CTTCTTTGTCCTCGCCACATAGTCGTCAGCGTAGGCACCTGGGAGCTGCTGATA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
3UTR-3UTR CCA 90 bp TATCAGCAGCTCCCAGGTGCCTACGCTGACGACTATGTGGCGAGGACAAAGAAGCCCAGTACTGCAGCTTaGGAGAAGGAGAGCCATCCC +
Preference number: 2 (lower is better)
Translates to: YQQLPGAYADDYVARTKKPSTAA*EKESHP
Trigger: GGGATGGCTCTCCTTCTCCCAAGCTGCAGTACTGGG...CTTCTTTGTCCTCGCCACATAGTCGTCAGCGTAGGCACCTGGGAGCTGCTGATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
3UTR-3UTR TCA 90 bp CTCAGGGCACAACATCTTCAGGCACCCACCCTTTCAACTCCCCGTGCATATCAGCTGCCGTCACACGAGTaGTGGAGATCCTGCCATCAA +
Preference number: 2 (lower is better)
Translates to: LRAQHLQAPTLSTPRAYQLPSHE*WRSCHQ
Trigger: TTGATGGCAGGATCTCCATCACTCGTGTGACGGCAG...CTGATATGCACGGGGAGTTGAAAGGGTGGGTGCCTGAAGATGTTGTGCCCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622445.4
3UTR-3UTR CCA 90 bp AGGGATGTTGGAGGCCAAGCTCATTCCTGGGGTAGGCAAAGGCTGAGGCATGGAAAGACAAGCTCCCCATaGGGTGTCCATGCTATGGCT +
Preference number: 2 (lower is better)
Translates to: RDVGGQAHSWGRQRLRHGKTSSP*GVHAMA
Trigger: AGCCATAGCATGGACACCCCATGGGGAGCTTGTCTT...TCCATGCCTCAGCCTTTGCCTACCCCAGGAATGAGCTTGGCCTCCAACATCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
3UTR-3UTR CCA 90 bp AGGCCTCTCCTGGGGGAAGTGAACATGGGTAACAAACAGAATCACGAGAGGCAACACTCCTCAGGGTTCTaGGCCCTGGACGTTGCCATG +
Preference number: 2 (lower is better)
Translates to: RPLLGEVNMGNKQNHERQHSSGF*ALDVAM
Trigger: CATGGCAACGTCCAGGGCCCAGAACCCTGAGGAGTG...TTGCCTCTCGTGATTCTGTTTGTTACCCATGTTCACTTCCCCCAGGAGAGGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
3UTR-3UTR CCA 90 bp CCCATCCATCCACAACAGGCAGGTAAAAACCGACAGCTGGGGCTTAAGGGCCTCCTTCTAATCAGTAAGTaGAAGCTGCACCCCACCCCC +
Preference number: 2 (lower is better)
Translates to: PIHPQQAGKNRQLGLKGLLLISK*KLHPTP
Trigger: GGGGGTGGGGTGCAGCTTCCACTTACTGATTAGAAG...GAGGCCCTTAAGCCCCAGCTGTCGGTTTTTACCTGCCTGTTGTGGATGGATGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
3UTR-3UTR CCA 90 bp GCAGCCGGGCAGGCCCCAGTCCTTGTTGGCACACTCGGCTCTCTCTGGCCCAGCCAAAGGACAGGACAGTaGTTTTATATATGGCAAAAT +
Preference number: 2 (lower is better)
Translates to: AAGQAPVLVGTLGSLWPSQRTGQ*FYIWQN
Trigger: ATTTTGCCATATATAAAACCACTGTCCTGTCCTTTG...GCTGGGCCAGAGAGAGCCGAGTGTGCCAACAAGGACTGGGGCCTGCCCGGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
3UTR-3UTR CCA 90 bp GCTCCTGGCTTGGGCACAATACATCAGAGGGCCAAAATCAAAGGATCATCTTTTGCCTGCCCGGCCTGGTaGGTGGCTGCTGGGGTAAAG +
Preference number: 2 (lower is better)
Translates to: APGLGTIHQRAKIKGSSFACPAW*VAAGVK
Trigger: CTTTACCCCAGCAGCCACCCACCAGGCCGGGCAGGC...AAAAGATGATCCTTTGATTTTGGCCCTCTGATGTATTGTGCCCAAGCCAGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000622445.4
3UTR-3UTR CCA 90 bp AGGCCTCTCCTGGGGGAAGTGAACATGGGTAACAAACAGAATCACGAGAGGCAAGTAAAAACCGACAGCTaGGGCTTAAGGGCCTCCCGG +
Preference number: 2 (lower is better)
Translates to: RPLLGEVNMGNKQNHERQVKTDS*GLRASR
Trigger: CCGGGAGGCCCTTAAGCCCCAGCTGTCGGTTTTTAC...TTGCCTCTCGTGATTCTGTTTGTTACCCATGTTCACTTCCCCCAGGAGAGGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
3UTR-3UTR CCA 90 bp AGGGATGTTGGAGGCCAAGCTCATTCCTGGGGTAGGCAAAGGCTGAGGCATGGAGACACTTCAGAAAGGTaGGTATCCCCCATCCATCCA +
Preference number: 2 (lower is better)
Translates to: RDVGGQAHSWGRQRLRHGDTSER*VSPIHP
Trigger: TGGATGGATGGGGGATACCCACCTTTCTGAAGTGTC...TCCATGCCTCAGCCTTTGCCTACCCCAGGAATGAGCTTGGCCTCCAACATCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
3UTR-3UTR CCA 90 bp ACATTGAGCTTCCCATTGCCTTTGGCTCTACTTGTGGAGAGACAGGTAAGTGAAGGTTCAGCAGCGGATTaGGTGGCGTGCTGCTGGGCG +
Preference number: 2 (lower is better)
Translates to: TLSFPLPLALLVERQVSEGSAAD*VACCWA
Trigger: CGCCCAGCAGCACGCCACCCAATCCGCTGCTGAACC...TTCACTTACCTGTCTCTCCACAAGTAGAGCCAAAGGCAATGGGAAGCTCAATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622445.4
3UTR-3UTR TCA 90 bp ATGGGAGAAAGGGGACACTTCAGAAAGGTGGGTATCCCCCATCCATCCACAACATTGAGCAAAGGCATCTaGAAGGAGGGAGACAGCGCC +
Preference number: 2 (lower is better)
Translates to: MGERGHFRKVGIPHPSTTLSKGI*KEGDSA
Trigger: GGCGCTGTCTCCCTCCTTTCAGATGCCTTTGCTCAA...TGTTGTGGATGGATGGGGGATACCCACCTTTCTGAAGTGTCCCCTTTCTCCCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
3UTR-3UTR GCA 90 bp GGCTCAGATGCAGAGGGGCCCCCTCTACTAATGGCAGCAGGCAAGGGATGTTGGAAAGAGTTAAGGAAGTaGACCTTTTCTCTAGGAGGG +
Preference number: 2 (lower is better)
Translates to: GSDAEGPPLLMAAGKGCWKELRK*TFSLGG
Trigger: CCCTCCTAGAGAAAAGGTGCACTTCCTTAACTCTTT...CCAACATCCCTTGCCTGCTGCCATTAGTAGAGGGGGCCCCTCTGCATCTGAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
3UTR-3UTR CCA 90 bp AAGACAAGCTCCCCATGGGGTGTCCATGCTATGGCTTTCACCGACCAGACGATGGAGAGCCCCTTAAGATaGGAGAAAGGGGACACTTCA +
Preference number: 2 (lower is better)
Translates to: KTSSPWGVHAMAFTDQTMESPLR*EKGDTS
Trigger: TGAAGTGTCCCCTTTCTCCCATCTTAAGGGGCTCTC...CATCGTCTGGTCGGTGAAAGCCATAGCATGGACACCCCATGGGGAGCTTGTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
3UTR-3UTR TCA 90 bp CTCAGGGCACAACATCTTCAGGCACCCACCCTTTCAACTCCCCGTGCATATCAGAGAAACCCCAAGCTTTaGGCAAAGGCATCTGAAAGG +
Preference number: 2 (lower is better)
Translates to: LRAQHLQAPTLSTPRAYQRNPKL*AKASER
Trigger: CCTTTCAGATGCCTTTGCTCAAAGCTTGGGGTTTCT...CTGATATGCACGGGGAGTTGAAAGGGTGGGTGCCTGAAGATGTTGTGCCCTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
3UTR-3UTR GCA 90 bp AGGATCATCTTTTCTTTTGAGTCAATGACTCAGGGCACAACATCTTCAGGCACCGCCAAGGCAAAGGGATaGCCCAGGGGAGAGGGGGTA +
Preference number: 2 (lower is better)
Translates to: RIIFSFESMTQGTTSSGTAKAKG*PRGEGV
Trigger: TACCCCCTCTCCCCTGGGGCATCCCTTTGCCTTGGC...GGTGCCTGAAGATGTTGTGCCCTGAGTCATTGACTCAAAAGAAAAGATGATCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
3UTR-3UTR CCA 90 bp TTTTCTTTTGAGTCAATGACTCAGGGCACAACATCTTCAGGCACCCACCCTTTCGGCCCCAGTCCTTGTTaGCACACTCGGCTCTCTCTG +
Preference number: 2 (lower is better)
Translates to: FSFESMTQGTTSSGTHPFGPSPC*HTRLSL
Trigger: CAGAGAGAGCCGAGTGTGCCAACAAGGACTGGGGCC...GAAAGGGTGGGTGCCTGAAGATGTTGTGCCCTGAGTCATTGACTCAAAAGAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
3UTR-3UTR CCA 90 bp CTCAGGGCACAACATCTTCAGGCACCCACCCTTTCAACTCCCCGTGCATATCAGATGGGAAAGAATCTGTaGCCTCCCTTTCCAGGAAAA +
Preference number: 2 (lower is better)
Translates to: LRAQHLQAPTLSTPRAYQMGKNL*PPFPGK
Trigger: TTTTCCTGGAAAGGGAGGCCACAGATTCTTTCCCAT...CTGATATGCACGGGGAGTTGAAAGGGTGGGTGCCTGAAGATGTTGTGCCCTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
3UTR-3UTR CCA 90 bp AGGATCATCTTTTCTTTTGAGTCAATGACTCAGGGCACAACATCTTCAGGCACCGAGGGACCTTGGATCTaGGGTCTGGGGAAGAGAGCC +
Preference number: 2 (lower is better)
Translates to: RIIFSFESMTQGTTSSGTEGPWI*GLGKRA
Trigger: GGCTCTCTTCCCCAGACCCCAGATCCAAGGTCCCTC...GGTGCCTGAAGATGTTGTGCCCTGAGTCATTGACTCAAAAGAAAAGATGATCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
3UTR-3UTR CCA 90 bp AGGATCATCTTTTCTTTTGAGTCAATGACTCAGGGCACAACATCTTCAGGCACCCACTCCTCAGGGTTCTaGGCCCTGGACGTTGCCATG +
Preference number: 2 (lower is better)
Translates to: RIIFSFESMTQGTTSSGTHSSGF*ALDVAM
Trigger: CATGGCAACGTCCAGGGCCCAGAACCCTGAGGAGTG...GGTGCCTGAAGATGTTGTGCCCTGAGTCATTGACTCAAAAGAAAAGATGATCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
3UTR-3UTR GCA 90 bp ACATTGAGCTTCCCATTGCCTTTGGCTCTACTTGTGGAGAGACAGGTAAGTGAACCTTTCAACTCCCCGTaGATATCAGCAGCTCCCAGG +
Preference number: 2 (lower is better)
Translates to: TLSFPLPLALLVERQVSEPFNSP*ISAAPR
Trigger: CCTGGGAGCTGCTGATATGCACGGGGAGTTGAAAGG...TTCACTTACCTGTCTCTCCACAAGTAGAGCCAAAGGCAATGGGAAGCTCAATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
3UTR-3UTR CCA 90 bp AGGATCATCTTTTCTTTTGAGTCAATGACTCAGGGCACAACATCTTCAGGCACCCATTGGCACAGGAGGTaGCGAGACAGGCATGAGGTG +
Preference number: 2 (lower is better)
Translates to: RIIFSFESMTQGTTSSGTHWHRR*RDRHEV
Trigger: CACCTCATGCCTGTCTCGCCACCTCCTGTGCCAATG...GGTGCCTGAAGATGTTGTGCCCTGAGTCATTGACTCAAAAGAAAAGATGATCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
3UTR-3UTR CCA 90 bp CCTTTGAAGTACCTTGGGAGAGGTGATCTTGATGTAAACAATGATGGGGGCCAGGACACTTCAGAAAGGTaGGTATCCCCCATCCATCCA +
Preference number: 2 (lower is better)
Translates to: PLKYLGRGDLDVNNDGGQDTSER*VSPIHP
Trigger: TGGATGGATGGGGGATACCCACCTTTCTGAAGTGTC...CTGGCCCCCATCATTGTTTACATCAAGATCACCTCTCCCAAGGTACTTCAAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000622445.4
3UTR-3UTR CCA 90 bp GCTCCTGGCTTGGGCACAATACATCAGAGGGCCAAAATCAAAGGATCATCTTTTACAAAGAAGCAGGCTTaGGAGGCAGCCACAAAGGAC +
Preference number: 2 (lower is better)
Translates to: APGLGTIHQRAKIKGSSFTKKQA*EAATKD
Trigger: GTCCTTTGTGGCTGCCTCCCAAGCCTGCTTCTTTGT...AAAAGATGATCCTTTGATTTTGGCCCTCTGATGTATTGTGCCCAAGCCAGGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
3UTR-3UTR CCA 90 bp TTTTCTTTTGAGTCAATGACTCAGGGCACAACATCTTCAGGCACCCACCCTTTCACGCTGACGACTATGTaGCGAGGACAAAGAAGCAGG +
Preference number: 2 (lower is better)
Translates to: FSFESMTQGTTSSGTHPFTLTTM*RGQRSR
Trigger: CCTGCTTCTTTGTCCTCGCCACATAGTCGTCAGCGT...GAAAGGGTGGGTGCCTGAAGATGTTGTGCCCTGAGTCATTGACTCAAAAGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
3UTR-3UTR GCA 90 bp TTTTCTTTTGAGTCAATGACTCAGGGCACAACATCTTCAGGCACCCACCCTTTCAAAGAGTTAAGGAAGTaGACCTTTTCTCTAGGAGGG +
Preference number: 2 (lower is better)
Translates to: FSFESMTQGTTSSGTHPFKELRK*TFSLGG
Trigger: CCCTCCTAGAGAAAAGGTGCACTTCCTTAACTCTTT...GAAAGGGTGGGTGCCTGAAGATGTTGTGCCCTGAGTCATTGACTCAAAAGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
3UTR CCA 72 bp CCTGAGGCGGGCAGCCGGGCAGGCCCCAGTCCTTGTTaGCACACTCGGCTCTCTCTGGCCCAGCTGGGATGC +
Preference number: 3 (lower is better)
Translates to: PEAGSRAGPSPC*HTRLSLAQLGC
Trigger: GCATCCCAGCTGGGCCAGAGAGAGCCGAGTGTGCCAACAAGGACTGGGGCCTGCCCGGCTGCCCGCCTCAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
3UTR-3UTR CAA 90 bp AGGTGCCCATCCCTGAGGCGGGCAGCCGGGCAGGCCCCAGTCCTTGTTGGCACACGGCCCCGGTTCCGGTaGTCGGTCAGCTCTTCCTCA +
Preference number: 3 (lower is better)
Translates to: RCPSLRRAAGQAPVLVGTRPRFR*SVSSSS
Trigger: TGAGGAAGAGCTGACCGACAACCGGAACCGGGGCCG...TGTGCCAACAAGGACTGGGGCCTGCCCGGCTGCCCGCCTCAGGGATGGGCACCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622445.4
3UTR GCA 72 bp CTGGGCTCAGAGCCCTTCCTCCCGCCGTGTGGCCCCTaGCTCTCAGCGAATGTAGACGCCTCGTCCCCAGCC +
Preference number: 3 (lower is better)
Translates to: LGSEPFLPPCGP*LSANVDASSPA
Trigger: GGCTGGGGACGAGGCGTCTACATTCGCTGAGAGGCAGGGGCCACACGGCGGGAGGAAGGGCTCTGAGCCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622445.4
3UTR CCA 72 bp GTGCATGCTGGCGTGCTCCCCGGTGGCCCGTTCCAGTaGCTGGTCCCCGGAAGCAAGGTAGGGTCCCTGGAG +
Preference number: 3 (lower is better)
Translates to: VHAGVLPGGPFQ*LVPGSKVGSLE
Trigger: CTCCAGGGACCCTACCTTGCTTCCGGGGACCAGCCACTGGAACGGGCCACCGGGGAGCACGCCAGCATGCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622445.4
3UTR CCA 72 bp GCGTCTCGGCCGCTCACTCCTCAGGGTTCTGGGCCCTaGACGTTGCCATGGCCACGGAGGGTAGAGGGTGCT +
Preference number: 3 (lower is better)
Translates to: ASRPLTPQGSGP*TLPWPRRVEGA
Trigger: AGCACCCTCTACCCTCCGTGGCCATGGCAACGTCCAGGGCCCAGAACCCTGAGGAGTGAGCGGCCGAGACGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
3UTR CCA 72 bp TTTCGGCTGCCGGGGGTGTCGGCATCAAAAGTGTCTTaGCGGGACAGTGCCCGTAGCGTGCCTGCCCGGCCT +
Preference number: 3 (lower is better)
Translates to: FRLPGVSASKVS*RDSARSVPARP
Trigger: AGGCCGGGCAGGCACGCTACGGGCACTGTCCCGCCAAGACACTTTTGATGCCGACACCCCCGGCAGCCGAAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000622445.4
3UTR-3UTR CAA 90 bp CGGGCAGGCCCCAGTCCTTGTTGGCACACTCGGCTCTCTCTGGCCCAGCTGGGACCCCAGTACTGCAGCTaGGGAGAAGGAGAGCCATCC +
Preference number: 3 (lower is better)
Translates to: RAGPSPCWHTRLSLAQLGPQYCS*GEGEPS
Trigger: GGATGGCTCTCCTTCTCCCAAGCTGCAGTACTGGGG...TCCCAGCTGGGCCAGAGAGAGCCGAGTGTGCCAACAAGGACTGGGGCCTGCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
3UTR-3UTR CAA 90 bp CCGTGTAGGCAGAGTTTCGGCTGCCGGGGGTGTCGGCATCAAAAGTGTCTTGGCCGGTTCAGCAGCGGATaGGGTGGCGTGCTGCTGGGC +
Preference number: 3 (lower is better)
Translates to: PCRQSFGCRGCRHQKCLGRFSSG*GGVLLG
Trigger: GCCCAGCAGCACGCCACCCAATCCGCTGCTGAACCG...GCCAAGACACTTTTGATGCCGACACCCCCGGCAGCCGAAACTCTGCCTACACGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000622445.4
3UTR-3UTR CAA 90 bp AGGTGCCCATCCCTGAGGCGGGCAGCCGGGCAGGCCCCAGTCCTTGTTGGCACACCCTCCAGCTCATTCTaGTTGCGCCCCAAAACTGGA +
Preference number: 3 (lower is better)
Translates to: RCPSLRRAAGQAPVLVGTPSSSF*LRPKTG
Trigger: TCCAGTTTTGGGGCGCAACAAGAATGAGCTGGAGGG...TGTGCCAACAAGGACTGGGGCCTGCCCGGCTGCCCGCCTCAGGGATGGGCACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000622445.4
3UTR GCA 72 bp CATCAAAAGTGTCTTGGCGGGACAGTGCCCGTAGCGTaGCTGCCCGGCCTGGTGGGTGGCTGCTGGGGTAAA +
Preference number: 3 (lower is better)
Translates to: HQKCLGGTVPVA*LPGLVGGCWGK
Trigger: TTTACCCCAGCAGCCACCCACCAGGCCGGGCAGGCACGCTACGGGCACTGTCCCGCCAAGACACTTTTGATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622445.4
3UTR GCA 72 bp ACGTTGCCATGGCCACGGAGGGTAGAGGGTGCTGTATaGCTGCCAGCTTCCACCCAGAACCCTCCCCAAGAC +
Preference number: 3 (lower is better)
Translates to: TLPWPRRVEGAV*LPASTQNPPQD
Trigger: GTCTTGGGGAGGGTTCTGGGTGGAAGCTGGCAGGCATACAGCACCCTCTACCCTCCGTGGCCATGGCAACGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
3UTR CCA 72 bp GCAGCGGATTGGGTGGCGTGCTGCTGGGCGGGTGTGTaGCCTTCCAATAGGCTTCCAAGTACTCCGCCAGAT +
Preference number: 3 (lower is better)
Translates to: AADWVACCWAGV*PSNRLPSTPPD
Trigger: ATCTGGCGGAGTACTTGGAAGCCTATTGGAAGGCCACACACCCGCCCAGCAGCACGCCACCCAATCCGCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622445.4
3UTR CCA 72 bp CTAATCAGTAAGTGGAAGCTGCACCCCACCCCCAGGTaGAGGGTGGGACATTGGCACAGGAGGTGGCGAGAC +
Preference number: 3 (lower is better)
Translates to: LISKWKLHPTPR*RVGHWHRRWRD
Trigger: GTCTCGCCACCTCCTGTGCCAATGTCCCACCCTCCACCTGGGGGTGGGGTGCAGCTTCCACTTACTGATTAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
3UTR-3UTR CAA 90 bp AGCCATGGTGCGGTTCAGCAGCGGATTGGGTGGCGTGCTGCTGGGCGGGTGTGTTTCCGAGGCCGCTATTaGGACATTGAGGTGTTTGGA +
Preference number: 3 (lower is better)
Translates to: SHGAVQQRIGWRAAGRVCFRGRY*DIEVFG
Trigger: TCCAAACACCTCAATGTCCAAATAGCGGCCTCGGAA...ACACACCCGCCCAGCAGCACGCCACCCAATCCGCTGCTGAACCGCACCATGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622445.4
3UTR-3UTR CAA 90 bp TATCAGCAGCTCCCAGGTGCCTACGCTGACGACTATGTGGCGAGGACAAAGAAGCCCCAGTACTGCAGCTaGGGAGAAGGAGAGCCATCC +
Preference number: 3 (lower is better)
Translates to: YQQLPGAYADDYVARTKKPQYCS*GEGEPS
Trigger: GGATGGCTCTCCTTCTCCCAAGCTGCAGTACTGGGG...CTTCTTTGTCCTCGCCACATAGTCGTCAGCGTAGGCACCTGGGAGCTGCTGATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
3UTR-3UTR CAA 90 bp GAGGGGCAGGGTTGCTGGGCTACAGGGATGCCAAGGCAAAGGGATGCCCCAGGGTGTGTATTTAAGACATaGCACCAGTGGGTCTGGATC +
Preference number: 3 (lower is better)
Translates to: EGQGCWATGMPRQRDAPGCVFKT*HQWVWI
Trigger: GATCCAGACCCACTGGTGCAATGTCTTAAATACACA...CCCTGGGGCATCCCTTTGCCTTGGCATCCCTGTAGCCCAGCAACCCTGCCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
3UTR-3UTR CAA 90 bp CGGGCAGGCCCCAGTCCTTGTTGGCACACTCGGCTCTCTCTGGCCCAGCTGGGATCAATGATGATGTGTTaGCTGGGGTTGTTGAGAACT +
Preference number: 3 (lower is better)
Translates to: RAGPSPCWHTRLSLAQLGSMMMC*LGLLRT
Trigger: AGTTCTCAACAACCCCAGCAAACACATCATCATTGA...TCCCAGCTGGGCCAGAGAGAGCCGAGTGTGCCAACAAGGACTGGGGCCTGCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622445.4
3UTR-3UTR CAA 90 bp CCCCTGCCTCTCAGCGAATGTAGACGCCTCGTCCCCAGCCCTCCAGCTCATTCTGGACTTGATGAGCCTTaGAAGTACCTTGGGAGAGGT +
Preference number: 3 (lower is better)
Translates to: PLPLSECRRLVPSPPAHSGLDEP*KYLGRG
Trigger: ACCTCTCCCAAGGTACTTCAAAGGCTCATCAAGTCC...AGAATGAGCTGGAGGGCTGGGGACGAGGCGTCTACATTCGCTGAGAGGCAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622445.4
3UTR TCA 72 bp TCCCCGTGCATATCAGCAGCTCCCAGGTGCCTACGCTaGCGACTATGTGGCGAGGACAAAGAAGCAGGCTTG +
Preference number: 3 (lower is better)
Translates to: SPCISAAPRCLR*RLCGEDKEAGL
Trigger: CAAGCCTGCTTCTTTGTCCTCGCCACATAGTCGTCAGCGTAGGCACCTGGGAGCTGCTGATATGCACGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
3UTR TCA 72 bp ACACCAAAGAAACCCCAAGCTTTGAGCAAAGGCATCTaGAAGGAGGGAGACAGCGCCCCCTGGAGGCGAATA +
Preference number: 3 (lower is better)
Translates to: TPKKPQALSKGI*KEGDSAPWRRI
Trigger: TATTCGCCTCCAGGGGGCGCTGTCTCCCTCCTTTCAGATGCCTTTGCTCAAAGCTTGGGGTTTCTTTGGTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
3UTR CCA 72 bp GCTGACGACTATGTGGCGAGGACAAAGAAGCAGGCTTaGGAGGCAGCCACAAAGGACAGGACAGTGGTTTTA +
Preference number: 3 (lower is better)
Translates to: ADDYVARTKKQA*EAATKDRTVVL
Trigger: TAAAACCACTGTCCTGTCCTTTGTGGCTGCCTCCCAAGCCTGCTTCTTTGTCCTCGCCACATAGTCGTCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
3UTR CCA 72 bp AGTGTGGAGCTGGGACTGCCCAAGCAGCTCCTGGCTTaGGCACAATACATCAGAGGGCCAAAATCAAAGGAT +
Preference number: 3 (lower is better)
Translates to: SVELGLPKQLLA*AQYIRGPKSKD
Trigger: ATCCTTTGATTTTGGCCCTCTGATGTATTGTGCCCAAGCCAGGAGCTGCTTGGGCAGTCCCAGCTCCACACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
3UTR TCA 72 bp CACCAGTGGGTCTGGATCTCACCCACTGAGCAACATTaGGCTTCCCATTGCCTTTGGCTCTACTTGTGGAGA +
Preference number: 3 (lower is better)
Translates to: HQWVWISPTEQH*ASHCLWLYLWR
Trigger: TCTCCACAAGTAGAGCCAAAGGCAATGGGAAGCTCAATGTTGCTCAGTGGGTGAGATCCAGACCCACTGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
3UTR-3UTR CAA 90 bp ACATTGAGCTTCCCATTGCCTTTGGCTCTACTTGTGGAGAGACAGGTAAGTGAAAGGCCCCAGTCCTTGTaGGCACACTCGGCTCTCTCT +
Preference number: 3 (lower is better)
Translates to: TLSFPLPLALLVERQVSERPQSL*AHSALS
Trigger: AGAGAGAGCCGAGTGTGCCAACAAGGACTGGGGCCT...TTCACTTACCTGTCTCTCCACAAGTAGAGCCAAAGGCAATGGGAAGCTCAATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
3UTR-3UTR CAA 90 bp AGGATCATCTTTTCTTTTGAGTCAATGACTCAGGGCACAACATCTTCAGGCACCGTGGAGGGTGGGACATaGGCACAGGAGGTGGCGAGA +
Preference number: 3 (lower is better)
Translates to: RIIFSFESMTQGTTSSGTVEGGT*AQEVAR
Trigger: TCTCGCCACCTCCTGTGCCAATGTCCCACCCTCCAC...GGTGCCTGAAGATGTTGTGCCCTGAGTCATTGACTCAAAAGAAAAGATGATCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
3UTR-3UTR CAA 90 bp AGGCCTCTCCTGGGGGAAGTGAACATGGGTAACAAACAGAATCACGAGAGGCAATGTTTGCTGGGGTTGTaGAGAACTGAGCGCTTAGCC +
Preference number: 3 (lower is better)
Translates to: RPLLGEVNMGNKQNHERQCLLGL*RTERLA
Trigger: GGCTAAGCGCTCAGTTCTCAACAACCCCAGCAAACA...TTGCCTCTCGTGATTCTGTTTGTTACCCATGTTCACTTCCCCCAGGAGAGGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000622445.4
3UTR-3UTR CAA 90 bp CATATCAGCAGCTCCCAGGTGCCTACGCTGACGACTATGTGGCGAGGACAAAGAATGTGTTTGCTGGGGTaGTTGAGAACTGAGCGCTTA +
Preference number: 3 (lower is better)
Translates to: HISSSQVPTLTTMWRGQRMCLLG*LRTERL
Trigger: TAAGCGCTCAGTTCTCAACAACCCCAGCAAACACAT...TCTTTGTCCTCGCCACATAGTCGTCAGCGTAGGCACCTGGGAGCTGCTGATATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622445.4
3UTR TCA 72 bp CTCAATGATGATGTGTTTGCTGGGGTTGTTGAGAACTaGGCGCTTAGCCAGGGAAATATCTGCCGTCACACG +
Preference number: 3 (lower is better)
Translates to: LNDDVFAGVVEN*ALSQGNICRHT
Trigger: CGTGTGACGGCAGATATTTCCCTGGCTAAGCGCTCAGTTCTCAACAACCCCAGCAAACACATCATCATTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622445.4
CDS-3UTR GCA 90 bp GCAGCCGGGCAGGCCCCAGTCCTTGTTGGCACACTCGGCTCTCTCTGGCCCAGCGGGCGTGCCGCCCCCTaGAGGGTCTCCAAGCCCTGG +
Preference number: 4 (lower is better)
Translates to: AAGQAPVLVGTLGSLWPSGRAAP*RVSKPW
Trigger: CCAGGGCTTGGAGACCCTGCAGGGGGCGGCACGCCC...GCTGGGCCAGAGAGAGCCGAGTGTGCCAACAAGGACTGGGGCCTGCCCGGCTGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR CCA 90 bp ACAGGAGGTGGCGAGACAGGCATGAGGTGCCCATCCCTGAGGCGGGCAGCCGGGCGTGCCTGCCCGGCCTaGTGGGTGGCTGCTGGGGTA +
Preference number: 4 (lower is better)
Translates to: TGGGETGMRCPSLRRAAGRACPA*WVAAGV
Trigger: TACCCCAGCAGCCACCCACCAGGCCGGGCAGGCACG...CCCGGCTGCCCGCCTCAGGGATGGGCACCTCATGCCTGTCTCGCCACCTCCTGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR GCA 90 bp AGGTGCCCATCCCTGAGGCGGGCAGCCGGGCAGGCCCCAGTCCTTGTTGGCACATCGTGCATGCTGGCGTaGTCCCCGGTGGCCCGTTCC +
Preference number: 4 (lower is better)
Translates to: RCPSLRRAAGQAPVLVGTSCMLA*SPVARS
Trigger: GGAACGGGCCACCGGGGAGCACGCCAGCATGCACGA...TGTGCCAACAAGGACTGGGGCCTGCCCGGCTGCCCGCCTCAGGGATGGGCACCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR GCA 90 bp AGGTGCCCATCCCTGAGGCGGGCAGCCGGGCAGGCCCCAGTCCTTGTTGGCACAACAGTGCCCGTAGCGTaGCTGCCCGGCCTGGTGGGT +
Preference number: 4 (lower is better)
Translates to: RCPSLRRAAGQAPVLVGTTVPVA*LPGLVG
Trigger: ACCCACCAGGCCGGGCAGGCACGCTACGGGCACTGT...TGTGCCAACAAGGACTGGGGCCTGCCCGGCTGCCCGCCTCAGGGATGGGCACCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR CCA 90 bp TGCCCATCCCTGAGGCGGGCAGCCGGGCAGGCCCCAGTCCTTGTTGGCACACTCGCATGGGAGAGGCCGTaGGAGCCGAAAGCAGCGCGG +
Preference number: 4 (lower is better)
Translates to: CPSLRRAAGQAPVLVGTLAWERP*EPKAAR
Trigger: CCGCGCTGCTTTCGGCTCCCACGGCCTCTCCCATGC...GAGTGTGCCAACAAGGACTGGGGCCTGCCCGGCTGCCCGCCTCAGGGATGGGCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR CCA 90 bp TGCCCATCCCTGAGGCGGGCAGCCGGGCAGGCCCCAGTCCTTGTTGGCACACTCTGGGTGGCGTGCTGCTaGGCGGGTGTGTGGCCTTCC +
Preference number: 4 (lower is better)
Translates to: CPSLRRAAGQAPVLVGTLWVACC*AGVWPS
Trigger: GGAAGGCCACACACCCGCCCAGCAGCACGCCACCCA...GAGTGTGCCAACAAGGACTGGGGCCTGCCCGGCTGCCCGCCTCAGGGATGGGCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR GCA 90 bp TGCCCATCCCTGAGGCGGGCAGCCGGGCAGGCCCCAGTCCTTGTTGGCACACTCGTGTGGGGCGGCGGGTaGCAGTCACCACATCTCCCA +
Preference number: 4 (lower is better)
Translates to: CPSLRRAAGQAPVLVGTLVWGGG*QSPHLP
Trigger: TGGGAGATGTGGTGACTGGCACCCGCCGCCCCACAC...GAGTGTGCCAACAAGGACTGGGGCCTGCCCGGCTGCCCGCCTCAGGGATGGGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR CCA 90 bp AGGTGCCCATCCCTGAGGCGGGCAGCCGGGCAGGCCCCAGTCCTTGTTGGCACACTGGTGGGTGGCTGCTaGGGTAAAGGCCTGGGGGCT +
Preference number: 4 (lower is better)
Translates to: RCPSLRRAAGQAPVLVGTLVGGC*GKGLGA
Trigger: AGCCCCCAGGCCTTTACCCCAGCAGCCACCCACCAG...TGTGCCAACAAGGACTGGGGCCTGCCCGGCTGCCCGCCTCAGGGATGGGCACCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR TCA 90 bp GCAGCCGGGCAGGCCCCAGTCCTTGTTGGCACACTCGGCTCTCTCTGGCCCAGCAAGCCCTGGCCCCTCTaGGGGGTCAGTCTCCATGTC +
Preference number: 4 (lower is better)
Translates to: AAGQAPVLVGTLGSLWPSKPWPL*GVSLHV
Trigger: GACATGGAGACTGACCCCTCAGAGGGGCCAGGGCTT...GCTGGGCCAGAGAGAGCCGAGTGTGCCAACAAGGACTGGGGCCTGCCCGGCTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR GCA 90 bp AGGTGCCCATCCCTGAGGCGGGCAGCCGGGCAGGCCCCAGTCCTTGTTGGCACAGCCAAGGCAAAGGGATaGCCCAGGGGAGAGGGGGTA +
Preference number: 4 (lower is better)
Translates to: RCPSLRRAAGQAPVLVGTAKAKG*PRGEGV
Trigger: TACCCCCTCTCCCCTGGGGCATCCCTTTGCCTTGGC...TGTGCCAACAAGGACTGGGGCCTGCCCGGCTGCCCGCCTCAGGGATGGGCACCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR GCA 90 bp ACAGGAGGTGGCGAGACAGGCATGAGGTGCCCATCCCTGAGGCGGGCAGCCGGGGAGACAGGCATGAGGTaGCCATCCCTGAGGCGGGCA +
Preference number: 4 (lower is better)
Translates to: TGGGETGMRCPSLRRAAGETGMR*PSLRRA
Trigger: TGCCCGCCTCAGGGATGGGCACCTCATGCCTGTCTC...CCCGGCTGCCCGCCTCAGGGATGGGCACCTCATGCCTGTCTCGCCACCTCCTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR CCA 90 bp GCAGCCGGGCAGGCCCCAGTCCTTGTTGGCACACTCGGCTCTCTCTGGCCCAGCGATCTCCTGGGAGGGTaGGTAAGGGCCCCGGGACAT +
Preference number: 4 (lower is better)
Translates to: AAGQAPVLVGTLGSLWPSDLLGG*VRAPGH
Trigger: ATGTCCCGGGGCCCTTACCCACCCTCCCAGGAGATC...GCTGGGCCAGAGAGAGCCGAGTGTGCCAACAAGGACTGGGGCCTGCCCGGCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR CCA 90 bp TGCCCATCCCTGAGGCGGGCAGCCGGGCAGGCCCCAGTCCTTGTTGGCACACTCGAGCCGAGGCGGTTCTaGCGCAGCTTCTGTTCCTGC +
Preference number: 4 (lower is better)
Translates to: CPSLRRAAGQAPVLVGTLEPRRF*RSFCSC
Trigger: GCAGGAACAGAAGCTGCGCCAGAACCGCCTCGGCTC...GAGTGTGCCAACAAGGACTGGGGCCTGCCCGGCTGCCCGCCTCAGGGATGGGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR CCA 90 bp GCAGCCGGGCAGGCCCCAGTCCTTGTTGGCACACTCGGCTCTCTCTGGCCCAGCGCACCTCAGCCAGGCTaGAGCGTGTGTTGGAGCGCT +
Preference number: 4 (lower is better)
Translates to: AAGQAPVLVGTLGSLWPSAPQPG*SVCWSA
Trigger: AGCGCTCCAACACACGCTCCAGCCTGGCTGAGGTGC...GCTGGGCCAGAGAGAGCCGAGTGTGCCAACAAGGACTGGGGCCTGCCCGGCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR CCA 90 bp GGAGGGGCAGGGTTGCTGGGCTACAGGGATGCCAAGGCAAAGGGATGCCCCAGGTGGCGTGCTCCCCGGTaGCCCGTTCCAGTGGCTGGT +
Preference number: 4 (lower is better)
Translates to: GGAGLLGYRDAKAKGCPRWRAPR*PVPVAG
Trigger: ACCAGCCACTGGAACGGGCCACCGGGGAGCACGCCA...CCTGGGGCATCCCTTTGCCTTGGCATCCCTGTAGCCCAGCAACCCTGCCCCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR CCA 90 bp GGAGGGGCAGGGTTGCTGGGCTACAGGGATGCCAAGGCAAAGGGATGCCCCAGGGGTACTCGTGCATGCTaGCGTGCTCCCCGGTGGCCC +
Preference number: 4 (lower is better)
Translates to: GGAGLLGYRDAKAKGCPRGTRAC*RAPRWP
Trigger: GGGCCACCGGGGAGCACGCCAGCATGCACGAGTACC...CCTGGGGCATCCCTTTGCCTTGGCATCCCTGTAGCCCAGCAACCCTGCCCCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR CCA 90 bp CACTCCTCAGGGTTCTGGGCCCTGGACGTTGCCATGGCCACGGAGGGTAGAGGGGCCTGCCCGGCCTGGTaGGTGGCTGCTGGGGTAAAG +
Preference number: 4 (lower is better)
Translates to: HSSGFWALDVAMATEGRGACPAW*VAAGVK
Trigger: CTTTACCCCAGCAGCCACCCACCAGGCCGGGCAGGC...CCCTCTACCCTCCGTGGCCATGGCAACGTCCAGGGCCCAGAACCCTGAGGAGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
3UTR CAA 72 bp AGGGCTGCGGTAGCCATGGTGCGGTTCAGCAGCGGATaGGGTGGCGTGCTGCTGGGCGGGTGTGTGGCCTTC +
Preference number: 4 (lower is better)
Translates to: RAAVAMVRFSSG*GGVLLGGCVAF
Trigger: GAAGGCCACACACCCGCCCAGCAGCACGCCACCCAATCCGCTGCTGAACCGCACCATGGCTACCGCAGCCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622445.4
CDS-3UTR TCA 90 bp ACAGGAGGTGGCGAGACAGGCATGAGGTGCCCATCCCTGAGGCGGGCAGCCGGGAATACATGTCAGGTGTaGGCCCCTCGCTCCCTCCCC +
Preference number: 4 (lower is better)
Translates to: TGGGETGMRCPSLRRAAGNTCQV*APRSLP
Trigger: GGGGAGGGAGCGAGGGGCTCACACCTGACATGTATT...CCCGGCTGCCCGCCTCAGGGATGGGCACCTCATGCCTGTCTCGCCACCTCCTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR TCA 90 bp GGAGGGGCAGGGTTGCTGGGCTACAGGGATGCCAAGGCAAAGGGATGCCCCAGGAAGGGGCAGGCAGGGTaGGGGACCTTGGATCTGGGG +
Preference number: 4 (lower is better)
Translates to: GGAGLLGYRDAKAKGCPRKGQAG*GTLDLG
Trigger: CCCCAGATCCAAGGTCCCTCACCCTGCCTGCCCCTT...CCTGGGGCATCCCTTTGCCTTGGCATCCCTGTAGCCCAGCAACCCTGCCCCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR TCA 90 bp CGGGCAGGCCCCAGTCCTTGTTGGCACACTCGGCTCTCTCTGGCCCAGCTGGGACCCAGGTGCCTACGCTaGCGACTATGTGGCGAGGAC +
Preference number: 4 (lower is better)
Translates to: RAGPSPCWHTRLSLAQLGPRCLR*RLCGED
Trigger: GTCCTCGCCACATAGTCGTCAGCGTAGGCACCTGGG...TCCCAGCTGGGCCAGAGAGAGCCGAGTGTGCCAACAAGGACTGGGGCCTGCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR GCA 90 bp GAGGGGCAGGGTTGCTGGGCTACAGGGATGCCAAGGCAAAGGGATGCCCCAGGGGATTGGGTGGCGTGCTaGTGGGCGGGTGTGTGGCCT +
Preference number: 4 (lower is better)
Translates to: EGQGCWATGMPRQRDAPGDWVAC*WAGVWP
Trigger: AGGCCACACACCCGCCCAGCAGCACGCCACCCAATC...CCCTGGGGCATCCCTTTGCCTTGGCATCCCTGTAGCCCAGCAACCCTGCCCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR GCA 90 bp GGAGGGGCAGGGTTGCTGGGCTACAGGGATGCCAAGGCAAAGGGATGCCCCAGGGCTGGCAGCCAGGGCTaGGGTAGCCATGGTGCGGTT +
Preference number: 4 (lower is better)
Translates to: GGAGLLGYRDAKAKGCPRAGSQG*GSHGAV
Trigger: AACCGCACCATGGCTACCGCAGCCCTGGCTGCCAGC...CCTGGGGCATCCCTTTGCCTTGGCATCCCTGTAGCCCAGCAACCCTGCCCCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR GCA 90 bp GCCACGGAGGGTAGAGGGTGCTGTATGCCTGCCAGCTTCCACCCAGAACCCTCCTCGTGCATGCTGGCGTaGTCCCCGGTGGCCCGTTCC +
Preference number: 4 (lower is better)
Translates to: ATEGRGCCMPASFHPEPSSCMLA*SPVARS
Trigger: GGAACGGGCCACCGGGGAGCACGCCAGCATGCACGA...GGAGGGTTCTGGGTGGAAGCTGGCAGGCATACAGCACCCTCTACCCTCCGTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR GCA 90 bp GAGGGGCAGGGTTGCTGGGCTACAGGGATGCCAAGGCAAAGGGATGCCCCAGGGCTGGGTACTCGTGCATaGTGGCGTGCTCCCCGGTGG +
Preference number: 4 (lower is better)
Translates to: EGQGCWATGMPRQRDAPGLGTRA*WRAPRW
Trigger: CCACCGGGGAGCACGCCAGCATGCACGAGTACCCAG...CCCTGGGGCATCCCTTTGCCTTGGCATCCCTGTAGCCCAGCAACCCTGCCCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR GCA 90 bp GCAGCCGGGCAGGCCCCAGTCCTTGTTGGCACACTCGGCTCTCTCTGGCCCAGCTCACCGACCAGACGATaGTGCCAGGAAGCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: AAGQAPVLVGTLGSLWPSSPTRR*CQEAGR
Trigger: CCTCCCAGCTTCCTGGCAGCATCGTCTGGTCGGTGA...GCTGGGCCAGAGAGAGCCGAGTGTGCCAACAAGGACTGGGGCCTGCCCGGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR CCA 90 bp CCTCCTCCATGTTCCCTGCACTCCAGTTCCGACCCCAGAGCAGGAGGGAAGACGGGCTCCCTCAGCGCATaGGAGAGGCCGTGGGAGCCG +
Preference number: 4 (lower is better)
Translates to: PPPCSLHSSSDPRAGGKTGSLSA*ERPWEP
Trigger: CGGCTCCCACGGCCTCTCCCATGCGCTGAGGGAGCC...CGTCTTCCCTCCTGCTCTGGGGTCGGAACTGGAGTGCAGGGAACATGGAGGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344140.5
ENST00000394310.7
CDS-3UTR CCA 90 bp CGCAGTAGCGGGCCTTATTCCGGCCCCGGTTCCGGTTGTCGGTCAGCTCTTCCTTGGGTGGCGTGCTGCTaGGCGGGTGTGTGGCCTTCC +
Preference number: 4 (lower is better)
Translates to: RSSGPYSGPGSGCRSALPWVACC*AGVWPS
Trigger: GGAAGGCCACACACCCGCCCAGCAGCACGCCACCCA...AGGAAGAGCTGACCGACAACCGGAACCGGGGCCGGAATAAGGCCCGCTACTGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622445.4
CDS-3UTR CCA 90 bp GAGGGAGACAGCGCCCCCTGGAGGCGAATACATGTCAGGTGTGAGCCCCTCGCTCAGCAGCGGATTGGGTaGCGTGCTGCTGGGCGGGTG +
Preference number: 4 (lower is better)
Translates to: EGDSAPWRRIHVRCEPLAQQRIG*RAAGRV
Trigger: CACCCGCCCAGCAGCACGCCACCCAATCCGCTGCTG...AGCGAGGGGCTCACACCTGACATGTATTCGCCTCCAGGGGGCGCTGTCTCCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR CCA 90 bp AGCCATGGTGCGGTTCAGCAGCGGATTGGGTGGCGTGCTGCTGGGCGGGTGTGTGGTTCAGCAGCGGATTaGGTGGCGTGCTGCTGGGCG +
Preference number: 4 (lower is better)
Translates to: SHGAVQQRIGWRAAGRVCGSAAD*VACCWA
Trigger: CGCCCAGCAGCACGCCACCCAATCCGCTGCTGAACC...ACACACCCGCCCAGCAGCACGCCACCCAATCCGCTGCTGAACCGCACCATGGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622445.4
CDS-3UTR CCA 90 bp GAGGGGCAGGGTTGCTGGGCTACAGGGATGCCAAGGCAAAGGGATGCCCCAGGGGCTTCTGTTTGGCACTaGCAGGGGGTGTGGGGCGGC +
Preference number: 4 (lower is better)
Translates to: EGQGCWATGMPRQRDAPGASVWH*QGVWGG
Trigger: GCCGCCCCACACCCCCTGCCAGTGCCAAACAGAAGC...CCCTGGGGCATCCCTTTGCCTTGGCATCCCTGTAGCCCAGCAACCCTGCCCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000394303.8
CDS-3UTR CCA 90 bp AGGTGCCCATCCCTGAGGCGGGCAGCCGGGCAGGCCCCAGTCCTTGTTGGCACATGGAGGGTGGGACATTaGCACAGGAGGTGGCGAGAC +
Preference number: 4 (lower is better)
Translates to: RCPSLRRAAGQAPVLVGTWRVGH*HRRWRD
Trigger: GTCTCGCCACCTCCTGTGCCAATGTCCCACCCTCCA...TGTGCCAACAAGGACTGGGGCCTGCCCGGCTGCCCGCCTCAGGGATGGGCACCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
3UTR CAA 72 bp CGGCCGCTCACTCCTCAGGGTTCTGGGCCCTGGACGTaGCCATGGCCACGGAGGGTAGAGGGTGCTGTATGC +
Preference number: 4 (lower is better)
Translates to: RPLTPQGSGPWT*PWPRRVEGAVC
Trigger: GCATACAGCACCCTCTACCCTCCGTGGCCATGGCAACGTCCAGGGCCCAGAACCCTGAGGAGTGAGCGGCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR GCA 90 bp CGGGCAGGCCCCAGTCCTTGTTGGCACACTCGGCTCTCTCTGGCCCAGCTGGGAAAGGGCCCCGGGACATaGTGGTCTTCTGGACCATGG +
Preference number: 4 (lower is better)
Translates to: RAGPSPCWHTRLSLAQLGKGPGT*WSSGPW
Trigger: CCATGGTCCAGAAGACCAGCATGTCCCGGGGCCCTT...TCCCAGCTGGGCCAGAGAGAGCCGAGTGTGCCAACAAGGACTGGGGCCTGCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR GCA 90 bp TGCCCATCCCTGAGGCGGGCAGCCGGGCAGGCCCCAGTCCTTGTTGGCACACTCTTGCTGTATTTGCCCTaGGGGCTGGGGTCGAAGACC +
Preference number: 4 (lower is better)
Translates to: CPSLRRAAGQAPVLVGTLLLYLP*GLGSKT
Trigger: GGTCTTCGACCCCAGCCCGCAGGGCAAATACAGCAA...GAGTGTGCCAACAAGGACTGGGGCCTGCCCGGCTGCCCGCCTCAGGGATGGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR GCA 90 bp TGCCCATCCCTGAGGCGGGCAGCCGGGCAGGCCCCAGTCCTTGTTGGCACACTCTCCTCTTGCTGTATTTaGCCTGCGGGCTGGGGTCGA +
Preference number: 4 (lower is better)
Translates to: CPSLRRAAGQAPVLVGTLSSCCI*PAGWGR
Trigger: TCGACCCCAGCCCGCAGGGCAAATACAGCAAGAGGA...GAGTGTGCCAACAAGGACTGGGGCCTGCCCGGCTGCCCGCCTCAGGGATGGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR GCA 90 bp CGCAGTAGCGGGCCTTATTCCGGCCCCGGTTCCGGTTGTCGGTCAGCTCTTCCTGATTGGGTGGCGTGCTaGTGGGCGGGTGTGTGGCCT +
Preference number: 4 (lower is better)
Translates to: RSSGPYSGPGSGCRSALPDWVAC*WAGVWP
Trigger: AGGCCACACACCCGCCCAGCAGCACGCCACCCAATC...AGGAAGAGCTGACCGACAACCGGAACCGGGGCCGGAATAAGGCCCGCTACTGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622445.4
CDS-3UTR GCA 90 bp CACTCCTCAGGGTTCTGGGCCCTGGACGTTGCCATGGCCACGGAGGGTAGAGGGCCGCCGTGTGGCCCCTaGCTCTCAGCGAATGTAGAC +
Preference number: 4 (lower is better)
Translates to: HSSGFWALDVAMATEGRGPPCGP*LSANVD
Trigger: GTCTACATTCGCTGAGAGGCAGGGGCCACACGGCGG...CCCTCTACCCTCCGTGGCCATGGCAACGTCCAGGGCCCAGAACCCTGAGGAGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR CCA 90 bp CCTCCTCCATGTTCCCTGCACTCCAGTTCCGACCCCAGAGCAGGAGGGAAGACGGCATGGGAGAGGCCGTaGGAGCCGAAAGCAGCGCGG +
Preference number: 4 (lower is better)
Translates to: PPPCSLHSSSDPRAGGKTAWERP*EPKAAR
Trigger: CCGCGCTGCTTTCGGCTCCCACGGCCTCTCCCATGC...CGTCTTCCCTCCTGCTCTGGGGTCGGAACTGGAGTGCAGGGAACATGGAGGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344140.5
ENST00000394310.7
CDS-3UTR CCA 90 bp CGGGCAGGCCCCAGTCCTTGTTGGCACACTCGGCTCTCTCTGGCCCAGCTGGGAGGTCGAAGACCTCCATaGGGATCTCCTGGGAGGGTG +
Preference number: 4 (lower is better)
Translates to: RAGPSPCWHTRLSLAQLGGRRPP*GSPGRV
Trigger: CACCCTCCCAGGAGATCCCCATGGAGGTCTTCGACC...TCCCAGCTGGGCCAGAGAGAGCCGAGTGTGCCAACAAGGACTGGGGCCTGCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR CCA 90 bp ACAGGAGGTGGCGAGACAGGCATGAGGTGCCCATCCCTGAGGCGGGCAGCCGGGTATCGCCTGATTTGCTaGAGCCGAGGCGGTTCTGGC +
Preference number: 4 (lower is better)
Translates to: TGGGETGMRCPSLRRAAGYRLIC*SRGGSG
Trigger: GCCAGAACCGCCTCGGCTCCAGCAAATCAGGCGATA...CCCGGCTGCCCGCCTCAGGGATGGGCACCTCATGCCTGTCTCGCCACCTCCTGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR CCA 90 bp CCTCCTCCATGTTCCCTGCACTCCAGTTCCGACCCCAGAGCAGGAGGGAAGACGTGGGTGGCGTGCTGCTaGGCGGGTGTGTGGCCTTCC +
Preference number: 4 (lower is better)
Translates to: PPPCSLHSSSDPRAGGKTWVACC*AGVWPS
Trigger: GGAAGGCCACACACCCGCCCAGCAGCACGCCACCCA...CGTCTTCCCTCCTGCTCTGGGGTCGGAACTGGAGTGCAGGGAACATGGAGGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344140.5
ENST00000394310.7
CDS-3UTR CCA 90 bp CCTCCTCCATGTTCCCTGCACTCCAGTTCCGACCCCAGAGCAGGAGGGAAGACGCAGCAGCGGATTGGGTaGCGTGCTGCTGGGCGGGTG +
Preference number: 4 (lower is better)
Translates to: PPPCSLHSSSDPRAGGKTQQRIG*RAAGRV
Trigger: CACCCGCCCAGCAGCACGCCACCCAATCCGCTGCTG...CGTCTTCCCTCCTGCTCTGGGGTCGGAACTGGAGTGCAGGGAACATGGAGGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344140.5
ENST00000394310.7
CDS-3UTR CCA 90 bp GAGGGAGACAGCGCCCCCTGGAGGCGAATACATGTCAGGTGTGAGCCCCTCGCTGGTTCAGCAGCGGATTaGGTGGCGTGCTGCTGGGCG +
Preference number: 4 (lower is better)
Translates to: EGDSAPWRRIHVRCEPLAGSAAD*VACCWA
Trigger: CGCCCAGCAGCACGCCACCCAATCCGCTGCTGAACC...AGCGAGGGGCTCACACCTGACATGTATTCGCCTCCAGGGGGCGCTGTCTCCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR CCA 90 bp CCGTTCCAGTGGCTGGTCCCCGGAAGCAAGGTAGGGTCCCTGGAGGTTGGAGACGGTGGCCCGTTCCAGTaGCTGGTCCCCGGAAGCAAG +
Preference number: 4 (lower is better)
Translates to: PFQWLVPGSKVGSLEVGDGGPFQ*LVPGSK
Trigger: CTTGCTTCCGGGGACCAGCCACTGGAACGGGCCACC...GTCTCCAACCTCCAGGGACCCTACCTTGCTTCCGGGGACCAGCCACTGGAACGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622445.4
CDS-3UTR CCA 90 bp TGCCCATCCCTGAGGCGGGCAGCCGGGCAGGCCCCAGTCCTTGTTGGCACACTCGTAAAAACCGACAGCTaGGGCTTAAGGGCCTCCCGG +
Preference number: 4 (lower is better)
Translates to: CPSLRRAAGQAPVLVGTLVKTDS*GLRASR
Trigger: CCGGGAGGCCCTTAAGCCCCAGCTGTCGGTTTTTAC...GAGTGTGCCAACAAGGACTGGGGCCTGCCCGGCTGCCCGCCTCAGGGATGGGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR CCA 90 bp CGCAGTAGCGGGCCTTATTCCGGCCCCGGTTCCGGTTGTCGGTCAGCTCTTCCTCAGGGTTCTGGGCCCTaGACGTTGCCATGGCCACGG +
Preference number: 4 (lower is better)
Translates to: RSSGPYSGPGSGCRSALPQGSGP*TLPWPR
Trigger: CCGTGGCCATGGCAACGTCCAGGGCCCAGAACCCTG...AGGAAGAGCTGACCGACAACCGGAACCGGGGCCGGAATAAGGCCCGCTACTGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622445.4
CDS-3UTR CCA 90 bp CGGGCAGGCCCCAGTCCTTGTTGGCACACTCGGCTCTCTCTGGCCCAGCTGGGAGGCCCCAGTCCTTGTTaGCACACTCGGCTCTCTCTG +
Preference number: 4 (lower is better)
Translates to: RAGPSPCWHTRLSLAQLGGPSPC*HTRLSL
Trigger: CAGAGAGAGCCGAGTGTGCCAACAAGGACTGGGGCC...TCCCAGCTGGGCCAGAGAGAGCCGAGTGTGCCAACAAGGACTGGGGCCTGCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR TCA 90 bp CCTCCTCCATGTTCCCTGCACTCCAGTTCCGACCCCAGAGCAGGAGGGAAGACGTCCAGAGCGACCAACTaGAGGGTCCGGGCCAGCTCG +
Preference number: 4 (lower is better)
Translates to: PPPCSLHSSSDPRAGGKTSRATN*RVRASS
Trigger: CGAGCTGGCCCGGACCCTTCAGTTGGTCGCTCTGGA...CGTCTTCCCTCCTGCTCTGGGGTCGGAACTGGAGTGCAGGGAACATGGAGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344140.5
ENST00000394310.7
CDS-3UTR GCA 90 bp CGGGCAGGCCCCAGTCCTTGTTGGCACACTCGGCTCTCTCTGGCCCAGCTGGGATTGGCCTTCTCGAGCTaGGCTAATGCCTGGCGCTCT +
Preference number: 4 (lower is better)
Translates to: RAGPSPCWHTRLSLAQLGLAFSS*ANAWRS
Trigger: AGAGCGCCAGGCATTAGCGCAGCTCGAGAAGGCCAA...TCCCAGCTGGGCCAGAGAGAGCCGAGTGTGCCAACAAGGACTGGGGCCTGCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR GCA 90 bp CCTCCTCCATGTTCCCTGCACTCCAGTTCCGACCCCAGAGCAGGAGGGAAGACGGTGTGGGGCGGCGGGTaGCAGTCACCACATCTCCCA +
Preference number: 4 (lower is better)
Translates to: PPPCSLHSSSDPRAGGKTVWGGG*QSPHLP
Trigger: TGGGAGATGTGGTGACTGGCACCCGCCGCCCCACAC...CGTCTTCCCTCCTGCTCTGGGGTCGGAACTGGAGTGCAGGGAACATGGAGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344140.5
ENST00000394310.7
CDS-3UTR GCA 90 bp CGGGCAGGCCCCAGTCCTTGTTGGCACACTCGGCTCTCTCTGGCCCAGCTGGGACGCTCGATTTCACTCTaGACCTCAGCCAGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: RAGPSPCWHTRLSLAQLGRSISL*TSARLE
Trigger: CTCCAGCCTGGCTGAGGTGCAGAGTGAAATCGAGCG...TCCCAGCTGGGCCAGAGAGAGCCGAGTGTGCCAACAAGGACTGGGGCCTGCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR GCA 90 bp CCTCCTCCATGTTCCCTGCACTCCAGTTCCGACCCCAGAGCAGGAGGGAAGACGGATTGGGTGGCGTGCTaGTGGGCGGGTGTGTGGCCT +
Preference number: 4 (lower is better)
Translates to: PPPCSLHSSSDPRAGGKTDWVAC*WAGVWP
Trigger: AGGCCACACACCCGCCCAGCAGCACGCCACCCAATC...CGTCTTCCCTCCTGCTCTGGGGTCGGAACTGGAGTGCAGGGAACATGGAGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344140.5
ENST00000394310.7
CDS-3UTR GCA 90 bp CCTCCTCCATGTTCCCTGCACTCCAGTTCCGACCCCAGAGCAGGAGGGAAGACGGCTGGCAGCCAGGGCTaGGGTAGCCATGGTGCGGTT +
Preference number: 4 (lower is better)
Translates to: PPPCSLHSSSDPRAGGKTAGSQG*GSHGAV
Trigger: AACCGCACCATGGCTACCGCAGCCCTGGCTGCCAGC...CGTCTTCCCTCCTGCTCTGGGGTCGGAACTGGAGTGCAGGGAACATGGAGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344140.5
ENST00000394310.7
CDS-3UTR GCA 90 bp CCTCCTCCATGTTCCCTGCACTCCAGTTCCGACCCCAGAGCAGGAGGGAAGACGCCTGGGGCACCACACTaGCCCGCTGTGAGGACTCCA +
Preference number: 4 (lower is better)
Translates to: PPPCSLHSSSDPRAGGKTPGAPH*PAVRTP
Trigger: TGGAGTCCTCACAGCGGGGCAGTGTGGTGCCCCAGG...CGTCTTCCCTCCTGCTCTGGGGTCGGAACTGGAGTGCAGGGAACATGGAGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344140.5
ENST00000394310.7
CDS-3UTR GCA 90 bp GGAGGGGCAGGGTTGCTGGGCTACAGGGATGCCAAGGCAAAGGGATGCCCCAGGAGGCAGAGTTTCGGCTaGCGGGGGTGTCGGCATCAA +
Preference number: 4 (lower is better)
Translates to: GGAGLLGYRDAKAKGCPRRQSFG*RGCRHQ
Trigger: TTGATGCCGACACCCCCGGCAGCCGAAACTCTGCCT...CCTGGGGCATCCCTTTGCCTTGGCATCCCTGTAGCCCAGCAACCCTGCCCCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR GCA 90 bp ATCCAGAGCGACCAACTGAAGGGTCCGGGCCAGCTCGAAGATTCGCTCGATTTCGGGCGTGCCGCCCCCTaGAGGGTCTCCAAGCCCTGG +
Preference number: 4 (lower is better)
Translates to: IQSDQLKGPGQLEDSLDFGRAAP*RVSKPW
Trigger: CCAGGGCTTGGAGACCCTGCAGGGGGCGGCACGCCC...GAAATCGAGCGAATCTTCGAGCTGGCCCGGACCCTTCAGTTGGTCGCTCTGGAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000622445.4
CDS-3UTR GCA 90 bp GAGGGAGACAGCGCCCCCTGGAGGCGAATACATGTCAGGTGTGAGCCCCTCGCTCCGCCGTGTGGCCCCTaGCTCTCAGCGAATGTAGAC +
Preference number: 4 (lower is better)
Translates to: EGDSAPWRRIHVRCEPLAPPCGP*LSANVD
Trigger: GTCTACATTCGCTGAGAGGCAGGGGCCACACGGCGG...AGCGAGGGGCTCACACCTGACATGTATTCGCCTCCAGGGGGCGCTGTCTCCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR GCA 90 bp GCCACGGAGGGTAGAGGGTGCTGTATGCCTGCCAGCTTCCACCCAGAACCCTCCGCCAAGGCAAAGGGATaGCCCAGGGGAGAGGGGGTA +
Preference number: 4 (lower is better)
Translates to: ATEGRGCCMPASFHPEPSAKAKG*PRGEGV
Trigger: TACCCCCTCTCCCCTGGGGCATCCCTTTGCCTTGGC...GGAGGGTTCTGGGTGGAAGCTGGCAGGCATACAGCACCCTCTACCCTCCGTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR CCA 90 bp ACAGGAGGTGGCGAGACAGGCATGAGGTGCCCATCCCTGAGGCGGGCAGCCGGGGACATGCTGGTCTTCTaGACCATGGAGAGGAGCCTC +
Preference number: 4 (lower is better)
Translates to: TGGGETGMRCPSLRRAAGDMLVF*TMERSL
Trigger: GAGGCTCCTCTCCATGGTCCAGAAGACCAGCATGTC...CCCGGCTGCCCGCCTCAGGGATGGGCACCTCATGCCTGTCTCGCCACCTCCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR CCA 90 bp GAGGGAGACAGCGCCCCCTGGAGGCGAATACATGTCAGGTGTGAGCCCCTCGCTGATCTCCTGGGAGGGTaGGTAAGGGCCCCGGGACAT +
Preference number: 4 (lower is better)
Translates to: EGDSAPWRRIHVRCEPLADLLGG*VRAPGH
Trigger: ATGTCCCGGGGCCCTTACCCACCCTCCCAGGAGATC...AGCGAGGGGCTCACACCTGACATGTATTCGCCTCCAGGGGGCGCTGTCTCCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR CCA 90 bp CACTCCTCAGGGTTCTGGGCCCTGGACGTTGCCATGGCCACGGAGGGTAGAGGGGGTCGAAGACCTCCATaGGGATCTCCTGGGAGGGTG +
Preference number: 4 (lower is better)
Translates to: HSSGFWALDVAMATEGRGGRRPP*GSPGRV
Trigger: CACCCTCCCAGGAGATCCCCATGGAGGTCTTCGACC...CCCTCTACCCTCCGTGGCCATGGCAACGTCCAGGGCCCAGAACCCTGAGGAGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR CCA 90 bp GCAGCCGGGCAGGCCCCAGTCCTTGTTGGCACACTCGGCTCTCTCTGGCCCAGCGGCGGACAAAGCTGTTaGATGTGGTATCCGAGGACG +
Preference number: 4 (lower is better)
Translates to: AAGQAPVLVGTLGSLWPSGGQSC*MWYPRT
Trigger: CGTCCTCGGATACCACATCCAACAGCTTTGTCCGCC...GCTGGGCCAGAGAGAGCCGAGTGTGCCAACAAGGACTGGGGCCTGCCCGGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR CCA 90 bp CCGTTCCAGTGGCTGGTCCCCGGAAGCAAGGTAGGGTCCCTGGAGGTTGGAGACGCACCTCAGCCAGGCTaGAGCGTGTGTTGGAGCGCT +
Preference number: 4 (lower is better)
Translates to: PFQWLVPGSKVGSLEVGDAPQPG*SVCWSA
Trigger: AGCGCTCCAACACACGCTCCAGCCTGGCTGAGGTGC...GTCTCCAACCTCCAGGGACCCTACCTTGCTTCCGGGGACCAGCCACTGGAACGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622445.4
CDS-3UTR CCA 90 bp CCTCCTCCATGTTCCCTGCACTCCAGTTCCGACCCCAGAGCAGGAGGGAAGACGGGTTCAGCAGCGGATTaGGTGGCGTGCTGCTGGGCG +
Preference number: 4 (lower is better)
Translates to: PPPCSLHSSSDPRAGGKTGSAAD*VACCWA
Trigger: CGCCCAGCAGCACGCCACCCAATCCGCTGCTGAACC...CGTCTTCCCTCCTGCTCTGGGGTCGGAACTGGAGTGCAGGGAACATGGAGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344140.5
ENST00000394310.7
CDS-3UTR CCA 90 bp CCTCCTCCATGTTCCCTGCACTCCAGTTCCGACCCCAGAGCAGGAGGGAAGACGGCTTCTGTTTGGCACTaGCAGGGGGTGTGGGGCGGC +
Preference number: 4 (lower is better)
Translates to: PPPCSLHSSSDPRAGGKTASVWH*QGVWGG
Trigger: GCCGCCCCACACCCCCTGCCAGTGCCAAACAGAAGC...CGTCTTCCCTCCTGCTCTGGGGTCGGAACTGGAGTGCAGGGAACATGGAGGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000394310.7
CDS-3UTR CCA 90 bp GGAGGGGCAGGGTTGCTGGGCTACAGGGATGCCAAGGCAAAGGGATGCCCCAGGGAGGGACCTTGGATCTaGGGTCTGGGGAAGAGAGCC +
Preference number: 4 (lower is better)
Translates to: GGAGLLGYRDAKAKGCPREGPWI*GLGKRA
Trigger: GGCTCTCTTCCCCAGACCCCAGATCCAAGGTCCCTC...CCTGGGGCATCCCTTTGCCTTGGCATCCCTGTAGCCCAGCAACCCTGCCCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR CCA 90 bp AGGTGCCCATCCCTGAGGCGGGCAGCCGGGCAGGCCCCAGTCCTTGTTGGCACAGGGGTGTCCATGCTATaGCTTTCACCGACCAGACGA +
Preference number: 4 (lower is better)
Translates to: RCPSLRRAAGQAPVLVGTGVSML*LSPTRR
Trigger: TCGTCTGGTCGGTGAAAGCCATAGCATGGACACCCC...TGTGCCAACAAGGACTGGGGCCTGCCCGGCTGCCCGCCTCAGGGATGGGCACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR CCA 90 bp AAACTGGACCCCCACCCTCAGCGCAGTAGCGGGCCTTATTCCGGCCCCGGTTCCGACCAGAGTGTTCCATaGGCTCCACACCCAGGTGGC +
Preference number: 4 (lower is better)
Translates to: KLDPHPQRSSGPYSGPGSDQSVP*APHPGG
Trigger: GCCACCTGGGTGTGGAGCCCATGGAACACTCTGGTC...GGAACCGGGGCCGGAATAAGGCCCGCTACTGCGCTGAGGGTGGGGGTCCAGTTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000622445.4
CDS-3UTR TCA 90 bp CCTCCTCCATGTTCCCTGCACTCCAGTTCCGACCCCAGAGCAGGAGGGAAGACGGGTGTAGGACTCCGCTaGGCCCTGGCGGACAAAGCT +
Preference number: 4 (lower is better)
Translates to: PPPCSLHSSSDPRAGGKTGVGLR*ALADKA
Trigger: AGCTTTGTCCGCCAGGGCTCAGCGGAGTCCTACACC...CGTCTTCCCTCCTGCTCTGGGGTCGGAACTGGAGTGCAGGGAACATGGAGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344140.5
ENST00000394310.7
CDS-3UTR GCA 90 bp GGCTCAGATGCAGAGGGGCCCCCTCTACTAATGGCAGCAGGCAAGGGATGTTGGTCCCCTGGGTACTCGTaGATGCTGGCGTGCTCCCCG +
Preference number: 4 (lower is better)
Translates to: GSDAEGPPLLMAAGKGCWSPGYS*MLACSP
Trigger: CGGGGAGCACGCCAGCATGCACGAGTACCCAGGGGA...CCAACATCCCTTGCCTGCTGCCATTAGTAGAGGGGGCCCCTCTGCATCTGAGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR GCA 90 bp GGGTCTGGGGAAGAGAGCCCCCATGGGAAAGAATCTGTGGCCTCCCTTTCCAGGTCCCCTGGGTACTCGTaGATGCTGGCGTGCTCCCCG +
Preference number: 4 (lower is better)
Translates to: GSGEESPHGKESVASLSRSPGYS*MLACSP
Trigger: CGGGGAGCACGCCAGCATGCACGAGTACCCAGGGGA...CCTGGAAAGGGAGGCCACAGATTCTTTCCCATGGGGGCTCTCTTCCCCAGACCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR GCA 90 bp GCCACGGAGGGTAGAGGGTGCTGTATGCCTGCCAGCTTCCACCCAGAACCCTCCGCTGGGCTACAGGGATaGCAAGGCAAAGGGATGCCC +
Preference number: 4 (lower is better)
Translates to: ATEGRGCCMPASFHPEPSAGLQG*QGKGMP
Trigger: GGGCATCCCTTTGCCTTGGCATCCCTGTAGCCCAGC...GGAGGGTTCTGGGTGGAAGCTGGCAGGCATACAGCACCCTCTACCCTCCGTGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR GCA 90 bp CCGTGTAGGCAGAGTTTCGGCTGCCGGGGGTGTCGGCATCAAAAGTGTCTTGGCGGGGAGGGGCAGGGTTaGTGGGCTACAGGGATGCCA +
Preference number: 4 (lower is better)
Translates to: PCRQSFGCRGCRHQKCLGGEGQG*WATGMP
Trigger: TGGCATCCCTGTAGCCCAGCAACCCTGCCCCTCCCC...GCCAAGACACTTTTGATGCCGACACCCCCGGCAGCCGAAACTCTGCCTACACGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000622445.4
CDS-3UTR CCA 90 bp CCTCCTCCATGTTCCCTGCACTCCAGTTCCGACCCCAGAGCAGGAGGGAAGACGGATCTCCTGGGAGGGTaGGTAAGGGCCCCGGGACAT +
Preference number: 4 (lower is better)
Translates to: PPPCSLHSSSDPRAGGKTDLLGG*VRAPGH
Trigger: ATGTCCCGGGGCCCTTACCCACCCTCCCAGGAGATC...CGTCTTCCCTCCTGCTCTGGGGTCGGAACTGGAGTGCAGGGAACATGGAGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344140.5
ENST00000394310.7
CDS-3UTR CCA 90 bp CGCAGTAGCGGGCCTTATTCCGGCCCCGGTTCCGGTTGTCGGTCAGCTCTTCCTATTTGCCCTGCGGGCTaGGGTCGAAGACCTCCATGG +
Preference number: 4 (lower is better)
Translates to: RSSGPYSGPGSGCRSALPICPAG*GRRPPW
Trigger: CCATGGAGGTCTTCGACCCCAGCCCGCAGGGCAAAT...AGGAAGAGCTGACCGACAACCGGAACCGGGGCCGGAATAAGGCCCGCTACTGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622445.4
CDS-3UTR CCA 90 bp TGCCCATCCCTGAGGCGGGCAGCCGGGCAGGCCCCAGTCCTTGTTGGCACACTCCAAATGCCACTGGCTTaGTCTTGGCCTTCTCGAGCT +
Preference number: 4 (lower is better)
Translates to: CPSLRRAAGQAPVLVGTLQMPLA*SWPSRA
Trigger: AGCTCGAGAAGGCCAAGACCAAGCCAGTGGCATTTG...GAGTGTGCCAACAAGGACTGGGGCCTGCCCGGCTGCCCGCCTCAGGGATGGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR CCA 90 bp ACAGGAGGTGGCGAGACAGGCATGAGGTGCCCATCCCTGAGGCGGGCAGCCGGGCACAGCAAATGCCACTaGCTTGGTCTTGGCCTTCTC +
Preference number: 4 (lower is better)
Translates to: TGGGETGMRCPSLRRAAGHSKCH*LGLGLL
Trigger: GAGAAGGCCAAGACCAAGCCAGTGGCATTTGCTGTG...CCCGGCTGCCCGCCTCAGGGATGGGCACCTCATGCCTGTCTCGCCACCTCCTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR CCA 90 bp CCTCCTCCATGTTCCCTGCACTCCAGTTCCGACCCCAGAGCAGGAGGGAAGACGGAGCCGAGGCGGTTCTaGCGCAGCTTCTGTTCCTGC +
Preference number: 4 (lower is better)
Translates to: PPPCSLHSSSDPRAGGKTEPRRF*RSFCSC
Trigger: GCAGGAACAGAAGCTGCGCCAGAACCGCCTCGGCTC...CGTCTTCCCTCCTGCTCTGGGGTCGGAACTGGAGTGCAGGGAACATGGAGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344140.5
ENST00000394310.7
CDS-3UTR CCA 90 bp CCTCCTCCATGTTCCCTGCACTCCAGTTCCGACCCCAGAGCAGGAGGGAAGACGGCGTTTGCCATGGGGTaGCGGGGTGGTGACACTGCT +
Preference number: 4 (lower is better)
Translates to: PPPCSLHSSSDPRAGGKTAFAMG*RGGDTA
Trigger: AGCAGTGTCACCACCCCGCCACCCCATGGCAAACGC...CGTCTTCCCTCCTGCTCTGGGGTCGGAACTGGAGTGCAGGGAACATGGAGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000344140.5
CDS-3UTR CCA 90 bp CCTCCTCCATGTTCCCTGCACTCCAGTTCCGACCCCAGAGCAGGAGGGAAGACGGGGATGCGTTTGCCATaGGGTGGCGGGGTGGTGACA +
Preference number: 4 (lower is better)
Translates to: PPPCSLHSSSDPRAGGKTGMRLP*GGGVVT
Trigger: TGTCACCACCCCGCCACCCCATGGCAAACGCATCCC...CGTCTTCCCTCCTGCTCTGGGGTCGGAACTGGAGTGCAGGGAACATGGAGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000344140.5
CDS-3UTR CCA 90 bp CCTCCTCCATGTTCCCTGCACTCCAGTTCCGACCCCAGAGCAGGAGGGAAGACGGCACCTCAGCCAGGCTaGAGCGTGTGTTGGAGCGCT +
Preference number: 4 (lower is better)
Translates to: PPPCSLHSSSDPRAGGKTAPQPG*SVCWSA
Trigger: AGCGCTCCAACACACGCTCCAGCCTGGCTGAGGTGC...CGTCTTCCCTCCTGCTCTGGGGTCGGAACTGGAGTGCAGGGAACATGGAGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344140.5
ENST00000394310.7
CDS-3UTR CCA 90 bp CCGTTCCAGTGGCTGGTCCCCGGAAGCAAGGTAGGGTCCCTGGAGGTTGGAGACGGAGACAGCGCCCCCTaGAGGCGAATACATGTCAGG +
Preference number: 4 (lower is better)
Translates to: PFQWLVPGSKVGSLEVGDGDSAP*RRIHVR
Trigger: CCTGACATGTATTCGCCTCCAGGGGGCGCTGTCTCC...GTCTCCAACCTCCAGGGACCCTACCTTGCTTCCGGGGACCAGCCACTGGAACGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000622445.4
CDS-3UTR CCA 90 bp GAGGGGCAGGGTTGCTGGGCTACAGGGATGCCAAGGCAAAGGGATGCCCCAGGGCATTGGCACAGGAGGTaGCGAGACAGGCATGAGGTG +
Preference number: 4 (lower is better)
Translates to: EGQGCWATGMPRQRDAPGHWHRR*RDRHEV
Trigger: CACCTCATGCCTGTCTCGCCACCTCCTGTGCCAATG...CCCTGGGGCATCCCTTTGCCTTGGCATCCCTGTAGCCCAGCAACCCTGCCCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR CCA 90 bp CGGGGGTGTCGGCATCAAAAGTGTCTTGGCGGGACAGTGCCCGTAGCGTGCCTGTGGAGGGTGGGACATTaGCACAGGAGGTGGCGAGAC +
Preference number: 4 (lower is better)
Translates to: RGCRHQKCLGGTVPVACLWRVGH*HRRWRD
Trigger: GTCTCGCCACCTCCTGTGCCAATGTCCCACCCTCCA...CAGGCACGCTACGGGCACTGTCCCGCCAAGACACTTTTGATGCCGACACCCCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000622445.4
CDS-3UTR CCA 90 bp GCAGCCGGGCAGGCCCCAGTCCTTGTTGGCACACTCGGCTCTCTCTGGCCCAGCAAGCAGCTCCTGGCTTaGGCACAATACATCAGAGGG +
Preference number: 4 (lower is better)
Translates to: AAGQAPVLVGTLGSLWPSKQLLA*AQYIRG
Trigger: CCCTCTGATGTATTGTGCCCAAGCCAGGAGCTGCTT...GCTGGGCCAGAGAGAGCCGAGTGTGCCAACAAGGACTGGGGCCTGCCCGGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR TCA 90 bp GGCTCAGATGCAGAGGGGCCCCCTCTACTAATGGCAGCAGGCAAGGGATGTTGGGGTGTAGGACTCCGCTaGGCCCTGGCGGACAAAGCT +
Preference number: 4 (lower is better)
Translates to: GSDAEGPPLLMAAGKGCWGVGLR*ALADKA
Trigger: AGCTTTGTCCGCCAGGGCTCAGCGGAGTCCTACACC...CCAACATCCCTTGCCTGCTGCCATTAGTAGAGGGGGCCCCTCTGCATCTGAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR TCA 90 bp CCTCCTCCATGTTCCCTGCACTCCAGTTCCGACCCCAGAGCAGGAGGGAAGACGCTTTGGGCTCGAAGGTaGTGGCCACTCCCTGCACAG +
Preference number: 4 (lower is better)
Translates to: PPPCSLHSSSDPRAGGKTLWARR*WPLPAQ
Trigger: CTGTGCAGGGAGTGGCCATCACCTTCGAGCCCAAAG...CGTCTTCCCTCCTGCTCTGGGGTCGGAACTGGAGTGCAGGGAACATGGAGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344140.5
ENST00000394310.7
CDS-3UTR TCA 90 bp CCTCCTCCATGTTCCCTGCACTCCAGTTCCGACCCCAGAGCAGGAGGGAAGACGACGGTCCCACCAGGATaGTGGGCCTCATGGAAGGCA +
Preference number: 4 (lower is better)
Translates to: PPPCSLHSSSDPRAGGKTTVPPG*WASWKA
Trigger: TGCCTTCCATGAGGCCCATCATCCTGGTGGGACCGT...CGTCTTCCCTCCTGCTCTGGGGTCGGAACTGGAGTGCAGGGAACATGGAGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344140.5
ENST00000394310.7
CDS-3UTR TCA 90 bp GGTGCCTACGCTGACGACTATGTGGCGAGGACAAAGAAGCAGGCTTGGGAGGCATCCAGAGCGACCAACTaGAGGGTCCGGGCCAGCTCG +
Preference number: 4 (lower is better)
Translates to: GAYADDYVARTKKQAWEASRATN*RVRASS
Trigger: CGAGCTGGCCCGGACCCTTCAGTTGGTCGCTCTGGA...TGCCTCCCAAGCCTGCTTCTTTGTCCTCGCCACATAGTCGTCAGCGTAGGCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR TCA 90 bp CCGTGTAGGCAGAGTTTCGGCTGCCGGGGGTGTCGGCATCAAAAGTGTCTTGGCCCCAGGTGCCTACGCTaGCGACTATGTGGCGAGGAC +
Preference number: 4 (lower is better)
Translates to: PCRQSFGCRGCRHQKCLGPRCLR*RLCGED
Trigger: GTCCTCGCCACATAGTCGTCAGCGTAGGCACCTGGG...GCCAAGACACTTTTGATGCCGACACCCCCGGCAGCCGAAACTCTGCCTACACGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000622445.4
CDS-3UTR GCA 90 bp CCTCCTCCATGTTCCCTGCACTCCAGTTCCGACCCCAGAGCAGGAGGGAAGACGAAGGGCCCCGGGACATaGTGGTCTTCTGGACCATGG +
Preference number: 4 (lower is better)
Translates to: PPPCSLHSSSDPRAGGKTKGPGT*WSSGPW
Trigger: CCATGGTCCAGAAGACCAGCATGTCCCGGGGCCCTT...CGTCTTCCCTCCTGCTCTGGGGTCGGAACTGGAGTGCAGGGAACATGGAGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344140.5
ENST00000394310.7
CDS-3UTR GCA 90 bp CCTCCTCCATGTTCCCTGCACTCCAGTTCCGACCCCAGAGCAGGAGGGAAGACGCGCAGCTTCTGTTCCTaGAGCAGGCGAAGGCTGTCC +
Preference number: 4 (lower is better)
Translates to: PPPCSLHSSSDPRAGGKTRSFCS*SRRRLS
Trigger: GGACAGCCTTCGCCTGCTGCAGGAACAGAAGCTGCG...CGTCTTCCCTCCTGCTCTGGGGTCGGAACTGGAGTGCAGGGAACATGGAGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344140.5
ENST00000394310.7
CDS-3UTR GCA 90 bp CCAAGACAAGCTCCCCATGGGGTGTCCATGCTATGGCTTTCACCGACCAGACGAACAGTGCCCGTAGCGTaGCTGCCCGGCCTGGTGGGT +
Preference number: 4 (lower is better)
Translates to: PRQAPHGVSMLWLSPTRRTVPVA*LPGLVG
Trigger: ACCCACCAGGCCGGGCAGGCACGCTACGGGCACTGT...TCGTCTGGTCGGTGAAAGCCATAGCATGGACACCCCATGGGGAGCTTGTCTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR GCA 90 bp GCCACGGAGGGTAGAGGGTGCTGTATGCCTGCCAGCTTCCACCCAGAACCCTCCACGGAGGGTAGAGGGTaGTGTATGCCTGCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: ATEGRGCCMPASFHPEPSTEGRG*CMPASF
Trigger: GAAGCTGGCAGGCATACAGCACCCTCTACCCTCCGT...GGAGGGTTCTGGGTGGAAGCTGGCAGGCATACAGCACCCTCTACCCTCCGTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR CCA 90 bp CCTCCTCCATGTTCCCTGCACTCCAGTTCCGACCCCAGAGCAGGAGGGAAGACGGGCCCCGGGACATGCTaGTCTTCTGGACCATGGAGA +
Preference number: 4 (lower is better)
Translates to: PPPCSLHSSSDPRAGGKTGPGTC*SSGPWR
Trigger: TCTCCATGGTCCAGAAGACCAGCATGTCCCGGGGCC...CGTCTTCCCTCCTGCTCTGGGGTCGGAACTGGAGTGCAGGGAACATGGAGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344140.5
ENST00000394310.7
CDS-3UTR CCA 90 bp CCTCCTCCATGTTCCCTGCACTCCAGTTCCGACCCCAGAGCAGGAGGGAAGACGGGTCGAAGACCTCCATaGGGATCTCCTGGGAGGGTG +
Preference number: 4 (lower is better)
Translates to: PPPCSLHSSSDPRAGGKTGRRPP*GSPGRV
Trigger: CACCCTCCCAGGAGATCCCCATGGAGGTCTTCGACC...CGTCTTCCCTCCTGCTCTGGGGTCGGAACTGGAGTGCAGGGAACATGGAGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344140.5
ENST00000394310.7
CDS-3UTR CCA 90 bp CCTCCTCCATGTTCCCTGCACTCCAGTTCCGACCCCAGAGCAGGAGGGAAGACGATTTGCCCTGCGGGCTaGGGTCGAAGACCTCCATGG +
Preference number: 4 (lower is better)
Translates to: PPPCSLHSSSDPRAGGKTICPAG*GRRPPW
Trigger: CCATGGAGGTCTTCGACCCCAGCCCGCAGGGCAAAT...CGTCTTCCCTCCTGCTCTGGGGTCGGAACTGGAGTGCAGGGAACATGGAGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344140.5
ENST00000394310.7
CDS-3UTR CCA 90 bp GCCACGGAGGGTAGAGGGTGCTGTATGCCTGCCAGCTTCCACCCAGAACCCTCCGACTCCGCTGAGCCCTaGCGGACAAAGCTGTTGGAT +
Preference number: 4 (lower is better)
Translates to: ATEGRGCCMPASFHPEPSDSAEP*RTKLLD
Trigger: ATCCAACAGCTTTGTCCGCCAGGGCTCAGCGGAGTC...GGAGGGTTCTGGGTGGAAGCTGGCAGGCATACAGCACCCTCTACCCTCCGTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR CCA 90 bp CACTCCTCAGGGTTCTGGGCCCTGGACGTTGCCATGGCCACGGAGGGTAGAGGGAGCTGCGCTAATGCCTaGCGCTCTGCTTCCTTCCTT +
Preference number: 4 (lower is better)
Translates to: HSSGFWALDVAMATEGRGSCANA*RSASFL
Trigger: AAGGAAGGAAGCAGAGCGCCAGGCATTAGCGCAGCT...CCCTCTACCCTCCGTGGCCATGGCAACGTCCAGGGCCCAGAACCCTGAGGAGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR CCA 90 bp GGAGGGGCAGGGTTGCTGGGCTACAGGGATGCCAAGGCAAAGGGATGCCCCAGGAGGCACCTCATCCCCTaGAGACGGATTGTAGCCAAC +
Preference number: 4 (lower is better)
Translates to: GGAGLLGYRDAKAKGCPRRHLIP*RRIVAN
Trigger: GTTGGCTACAATCCGTCTCCAGGGGATGAGGTGCCT...CCTGGGGCATCCCTTTGCCTTGGCATCCCTGTAGCCCAGCAACCCTGCCCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR CCA 90 bp CCTCCTCCATGTTCCCTGCACTCCAGTTCCGACCCCAGAGCAGGAGGGAAGACGAGGGCGCCCACTACATaGCATGTTCCTGCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: PPPCSLHSSSDPRAGGKTRAPTT*HVPAPG
Trigger: CCCAGGAGCAGGAACATGCCATGTAGTGGGCGCCCT...CGTCTTCCCTCCTGCTCTGGGGTCGGAACTGGAGTGCAGGGAACATGGAGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344140.5
ENST00000394310.7
CDS-3UTR CCA 90 bp CCTCTCAGCGAATGTAGACGCCTCGTCCCCAGCCCTCCAGCTCATTCTTGTTGCCTGGTGGGTGGCTGCTaGGGTAAAGGCCTGGGGGCT +
Preference number: 4 (lower is better)
Translates to: PLSECRRLVPSPPAHSCCLVGGC*GKGLGA
Trigger: AGCCCCCAGGCCTTTACCCCAGCAGCCACCCACCAG...GCAACAAGAATGAGCTGGAGGGCTGGGGACGAGGCGTCTACATTCGCTGAGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000622445.4
CDS-3UTR CCA 90 bp GGTCTGGGGAAGAGAGCCCCCATGGGAAAGAATCTGTGGCCTCCCTTTCCAGGACTTCCTCCCGCCGTGTaGCCCCTGCCTCTCAGCGAA +
Preference number: 4 (lower is better)
Translates to: GLGKRAPMGKNLWPPFPGLPPAV*PLPLSE
Trigger: TTCGCTGAGAGGCAGGGGCCACACGGCGGGAGGAAG...TCCTGGAAAGGGAGGCCACAGATTCTTTCCCATGGGGGCTCTCTTCCCCAGACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR CCA 90 bp GAGGGAGACAGCGCCCCCTGGAGGCGAATACATGTCAGGTGTGAGCCCCTCGCTGGGCCTCCCGGGAGCTaGGATGGTAACACCAAAGAA +
Preference number: 4 (lower is better)
Translates to: EGDSAPWRRIHVRCEPLAGPPGS*DGNTKE
Trigger: TTCTTTGGTGTTACCATCCCAGCTCCCGGGAGGCCC...AGCGAGGGGCTCACACCTGACATGTATTCGCCTCCAGGGGGCGCTGTCTCCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR CCA 90 bp CCCCTGCCTCTCAGCGAATGTAGACGCCTCGTCCCCAGCCCTCCAGCTCATTCTGAGGGACCTTGGATCTaGGGTCTGGGGAAGAGAGCC +
Preference number: 4 (lower is better)
Translates to: PLPLSECRRLVPSPPAHSEGPWI*GLGKRA
Trigger: GGCTCTCTTCCCCAGACCCCAGATCCAAGGTCCCTC...AGAATGAGCTGGAGGGCTGGGGACGAGGCGTCTACATTCGCTGAGAGGCAGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000622445.4
CDS-3UTR CCA 90 bp CACTCCTCAGGGTTCTGGGCCCTGGACGTTGCCATGGCCACGGAGGGTAGAGGGGGGGTGTCCATGCTATaGCTTTCACCGACCAGACGA +
Preference number: 4 (lower is better)
Translates to: HSSGFWALDVAMATEGRGGVSML*LSPTRR
Trigger: TCGTCTGGTCGGTGAAAGCCATAGCATGGACACCCC...CCCTCTACCCTCCGTGGCCATGGCAACGTCCAGGGCCCAGAACCCTGAGGAGTG
62% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR CCA 90 bp AGGTGCCCATCCCTGAGGCGGGCAGCCGGGCAGGCCCCAGTCCTTGTTGGCACAGCTTCCCATTGCCTTTaGCTCTACTTGTGGAGAGAC +
Preference number: 4 (lower is better)
Translates to: RCPSLRRAAGQAPVLVGTASHCL*LYLWRD
Trigger: GTCTCTCCACAAGTAGAGCCAAAGGCAATGGGAAGC...TGTGCCAACAAGGACTGGGGCCTGCCCGGCTGCCCGCCTCAGGGATGGGCACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR CCA 90 bp CCTCTGAGGGGTCAGTCTCCATGTCCACACATGAGTCTCCCAGCTCCGTGTAGGCACATGCTCTGTCACTaGCAGGGGGTGTGGGGCGGC +
Preference number: 4 (lower is better)
Translates to: PLRGQSPCPHMSLPAPCRHMLCH*QGVWGG
Trigger: GCCGCCCCACACCCCCTGCCAGTGACAGAGCATGTG...CCTACACGGAGCTGGGAGACTCATGTGTGGACATGGAGACTGACCCCTCAGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000622445.4
CDS-3UTR TCA 90 bp CCTCCTCCATGTTCCCTGCACTCCAGTTCCGACCCCAGAGCAGGAGGGAAGACGACTGGAGTTATCGCCTaGTTTGCTGGAGCCGAGGCG +
Preference number: 4 (lower is better)
Translates to: PPPCSLHSSSDPRAGGKTTGVIA*FAGAEA
Trigger: CGCCTCGGCTCCAGCAAATCAGGCGATAACTCCAGT...CGTCTTCCCTCCTGCTCTGGGGTCGGAACTGGAGTGCAGGGAACATGGAGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344140.5
ENST00000394310.7
CDS-3UTR TCA 90 bp CGGGGGTGTCGGCATCAAAAGTGTCTTGGCGGGACAGTGCCCGTAGCGTGCCTGCTCCATGTCCACACATaGGTCTCCCAGCTCCGTGTA +
Preference number: 4 (lower is better)
Translates to: RGCRHQKCLGGTVPVACLLHVHT*VSQLRV
Trigger: TACACGGAGCTGGGAGACTCATGTGTGGACATGGAG...CAGGCACGCTACGGGCACTGTCCCGCCAAGACACTTTTGATGCCGACACCCCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000622445.4
CDS-3UTR GCA 90 bp CCGTGTAGGCAGAGTTTCGGCTGCCGGGGGTGTCGGCATCAAAAGTGTCTTGGCAAGGGCCCCGGGACATaGTGGTCTTCTGGACCATGG +
Preference number: 4 (lower is better)
Translates to: PCRQSFGCRGCRHQKCLGKGPGT*WSSGPW
Trigger: CCATGGTCCAGAAGACCAGCATGTCCCGGGGCCCTT...GCCAAGACACTTTTGATGCCGACACCCCCGGCAGCCGAAACTCTGCCTACACGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000622445.4
CDS-3UTR GCA 90 bp CCTCCTCCATGTTCCCTGCACTCCAGTTCCGACCCCAGAGCAGGAGGGAAGACGTTGCTGTATTTGCCCTaGGGGCTGGGGTCGAAGACC +
Preference number: 4 (lower is better)
Translates to: PPPCSLHSSSDPRAGGKTLLYLP*GLGSKT
Trigger: GGTCTTCGACCCCAGCCCGCAGGGCAAATACAGCAA...CGTCTTCCCTCCTGCTCTGGGGTCGGAACTGGAGTGCAGGGAACATGGAGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344140.5
ENST00000394310.7
CDS-3UTR GCA 90 bp CCTCCTCCATGTTCCCTGCACTCCAGTTCCGACCCCAGAGCAGGAGGGAAGACGTCCTCTTGCTGTATTTaGCCTGCGGGCTGGGGTCGA +
Preference number: 4 (lower is better)
Translates to: PPPCSLHSSSDPRAGGKTSSCCI*PAGWGR
Trigger: TCGACCCCAGCCCGCAGGGCAAATACAGCAAGAGGA...CGTCTTCCCTCCTGCTCTGGGGTCGGAACTGGAGTGCAGGGAACATGGAGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344140.5
ENST00000394310.7
CDS-3UTR GCA 90 bp CCTCCTCCATGTTCCCTGCACTCCAGTTCCGACCCCAGAGCAGGAGGGAAGACGTTGGCCTTCTCGAGCTaGGCTAATGCCTGGCGCTCT +
Preference number: 4 (lower is better)
Translates to: PPPCSLHSSSDPRAGGKTLAFSS*ANAWRS
Trigger: AGAGCGCCAGGCATTAGCGCAGCTCGAGAAGGCCAA...CGTCTTCCCTCCTGCTCTGGGGTCGGAACTGGAGTGCAGGGAACATGGAGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344140.5
ENST00000394310.7
CDS-3UTR GCA 90 bp CCTCCTCCATGTTCCCTGCACTCCAGTTCCGACCCCAGAGCAGGAGGGAAGACGCGCTCGATTTCACTCTaGACCTCAGCCAGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: PPPCSLHSSSDPRAGGKTRSISL*TSARLE
Trigger: CTCCAGCCTGGCTGAGGTGCAGAGTGAAATCGAGCG...CGTCTTCCCTCCTGCTCTGGGGTCGGAACTGGAGTGCAGGGAACATGGAGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344140.5
ENST00000394310.7
CDS-3UTR GCA 90 bp CCTCCTCCATGTTCCCTGCACTCCAGTTCCGACCCCAGAGCAGGAGGGAAGACGCTCCTCCATGTTCCCTaGACTCCAGTTCCGACCCCA +
Preference number: 4 (lower is better)
Translates to: PPPCSLHSSSDPRAGGKTLLHVP*TPVPTP
Trigger: TGGGGTCGGAACTGGAGTGCAGGGAACATGGAGGAG...CGTCTTCCCTCCTGCTCTGGGGTCGGAACTGGAGTGCAGGGAACATGGAGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344140.5
ENST00000394310.7
CDS-3UTR GCA 90 bp GAGGGAGACAGCGCCCCCTGGAGGCGAATACATGTCAGGTGTGAGCCCCTCGCTCCCATGGGGTGTCCATaGTATGGCTTTCACCGACCA +
Preference number: 4 (lower is better)
Translates to: EGDSAPWRRIHVRCEPLAPMGCP*YGFHRP
Trigger: TGGTCGGTGAAAGCCATAGCATGGACACCCCATGGG...AGCGAGGGGCTCACACCTGACATGTATTCGCCTCCAGGGGGCGCTGTCTCCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR GCA 90 bp GGGTCTGGGGAAGAGAGCCCCCATGGGAAAGAATCTGTGGCCTCCCTTTCCAGGGCTGGGCTACAGGGATaGCAAGGCAAAGGGATGCCC +
Preference number: 4 (lower is better)
Translates to: GSGEESPHGKESVASLSRAGLQG*QGKGMP
Trigger: GGGCATCCCTTTGCCTTGGCATCCCTGTAGCCCAGC...CCTGGAAAGGGAGGCCACAGATTCTTTCCCATGGGGGCTCTCTTCCCCAGACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR GCA 90 bp CCTCTGAGGGGTCAGTCTCCATGTCCACACATGAGTCTCCCAGCTCCGTGTAGGGAGACAGGCATGAGGTaGCCATCCCTGAGGCGGGCA +
Preference number: 4 (lower is better)
Translates to: PLRGQSPCPHMSLPAPCRETGMR*PSLRRA
Trigger: TGCCCGCCTCAGGGATGGGCACCTCATGCCTGTCTC...CCTACACGGAGCTGGGAGACTCATGTGTGGACATGGAGACTGACCCCTCAGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622445.4
CDS-3UTR CCA 90 bp AAACTGGACCCCCACCCTCAGCGCAGTAGCGGGCCTTATTCCGGCCCCGGTTCCCAAAGCTGTTGGATGTaGTATCCGAGGACGTGCTCC +
Preference number: 4 (lower is better)
Translates to: KLDPHPQRSSGPYSGPGSQSCWM*YPRTCS
Trigger: GGAGCACGTCCTCGGATACCACATCCAACAGCTTTG...GGAACCGGGGCCGGAATAAGGCCCGCTACTGCGCTGAGGGTGGGGGTCCAGTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000622445.4
CDS-3UTR CCA 90 bp CCTCCTCCATGTTCCCTGCACTCCAGTTCCGACCCCAGAGCAGGAGGGAAGACGGACTCCGCTGAGCCCTaGCGGACAAAGCTGTTGGAT +
Preference number: 4 (lower is better)
Translates to: PPPCSLHSSSDPRAGGKTDSAEP*RTKLLD
Trigger: ATCCAACAGCTTTGTCCGCCAGGGCTCAGCGGAGTC...CGTCTTCCCTCCTGCTCTGGGGTCGGAACTGGAGTGCAGGGAACATGGAGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344140.5
ENST00000394310.7
CDS-3UTR CCA 90 bp CCTCCTCCATGTTCCCTGCACTCCAGTTCCGACCCCAGAGCAGGAGGGAAGACGCCACTGGCTTGGTCTTaGCCTTCTCGAGCTGCGCTA +
Preference number: 4 (lower is better)
Translates to: PPPCSLHSSSDPRAGGKTPLAWS*PSRAAL
Trigger: TAGCGCAGCTCGAGAAGGCCAAGACCAAGCCAGTGG...CGTCTTCCCTCCTGCTCTGGGGTCGGAACTGGAGTGCAGGGAACATGGAGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344140.5
ENST00000394310.7
CDS-3UTR CCA 90 bp GCCACGGAGGGTAGAGGGTGCTGTATGCCTGCCAGCTTCCACCCAGAACCCTCCAGGCACCTCATCCCCTaGAGACGGATTGTAGCCAAC +
Preference number: 4 (lower is better)
Translates to: ATEGRGCCMPASFHPEPSRHLIP*RRIVAN
Trigger: GTTGGCTACAATCCGTCTCCAGGGGATGAGGTGCCT...GGAGGGTTCTGGGTGGAAGCTGGCAGGCATACAGCACCCTCTACCCTCCGTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR CCA 90 bp CCTCCTCCATGTTCCCTGCACTCCAGTTCCGACCCCAGAGCAGGAGGGAAGACGTATCGCCTGATTTGCTaGAGCCGAGGCGGTTCTGGC +
Preference number: 4 (lower is better)
Translates to: PPPCSLHSSSDPRAGGKTYRLIC*SRGGSG
Trigger: GCCAGAACCGCCTCGGCTCCAGCAAATCAGGCGATA...CGTCTTCCCTCCTGCTCTGGGGTCGGAACTGGAGTGCAGGGAACATGGAGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344140.5
ENST00000394310.7
CDS-3UTR CCA 90 bp CCTCCTCCATGTTCCCTGCACTCCAGTTCCGACCCCAGAGCAGGAGGGAAGACGTGCTGGGCGGGTGTGTaGCCTTCCAATAGGCTTCCA +
Preference number: 4 (lower is better)
Translates to: PPPCSLHSSSDPRAGGKTCWAGV*PSNRLP
Trigger: TGGAAGCCTATTGGAAGGCCACACACCCGCCCAGCA...CGTCTTCCCTCCTGCTCTGGGGTCGGAACTGGAGTGCAGGGAACATGGAGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344140.5
ENST00000394310.7
CDS-3UTR CCA 90 bp CCTCCTCCATGTTCCCTGCACTCCAGTTCCGACCCCAGAGCAGGAGGGAAGACGGTGAGCACCTGTACCTaGAGGTTGGAGACAGGGGCA +
Preference number: 4 (lower is better)
Translates to: PPPCSLHSSSDPRAGGKTVSTCT*RLETGA
Trigger: TGCCCCTGTCTCCAACCTCCAGGTACAGGTGCTCAC...CGTCTTCCCTCCTGCTCTGGGGTCGGAACTGGAGTGCAGGGAACATGGAGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344140.5
ENST00000394310.7
CDS-3UTR CCA 90 bp AAGACAAGCTCCCCATGGGGTGTCCATGCTATGGCTTTCACCGACCAGACGATGGCCTGCCCGGCCTGGTaGGTGGCTGCTGGGGTAAAG +
Preference number: 4 (lower is better)
Translates to: KTSSPWGVHAMAFTDQTMACPAW*VAAGVK
Trigger: CTTTACCCCAGCAGCCACCCACCAGGCCGGGCAGGC...CATCGTCTGGTCGGTGAAAGCCATAGCATGGACACCCCATGGGGAGCTTGTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR CCA 90 bp GAGAAAGGGGACACTTCAGAAAGGTGGGTATCCCCCATCCATCCACAACAGGCACGTGCCTGCCCGGCCTaGTGGGTGGCTGCTGGGGTA +
Preference number: 4 (lower is better)
Translates to: EKGDTSERWVSPIHPQQARACPA*WVAAGV
Trigger: TACCCCAGCAGCCACCCACCAGGCCGGGCAGGCACG...TGCCTGTTGTGGATGGATGGGGGATACCCACCTTTCTGAAGTGTCCCCTTTCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR CCA 90 bp CCAAGACAAGCTCCCCATGGGGTGTCCATGCTATGGCTTTCACCGACCAGACGACTTCCTCCCGCCGTGTaGCCCCTGCCTCTCAGCGAA +
Preference number: 4 (lower is better)
Translates to: PRQAPHGVSMLWLSPTRRLPPAV*PLPLSE
Trigger: TTCGCTGAGAGGCAGGGGCCACACGGCGGGAGGAAG...TCGTCTGGTCGGTGAAAGCCATAGCATGGACACCCCATGGGGAGCTTGTCTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR CCA 90 bp CGGGCAGGCCCCAGTCCTTGTTGGCACACTCGGCTCTCTCTGGCCCAGCTGGGAGACACTTCAGAAAGGTaGGTATCCCCCATCCATCCA +
Preference number: 4 (lower is better)
Translates to: RAGPSPCWHTRLSLAQLGDTSER*VSPIHP
Trigger: TGGATGGATGGGGGATACCCACCTTTCTGAAGTGTC...TCCCAGCTGGGCCAGAGAGAGCCGAGTGTGCCAACAAGGACTGGGGCCTGCCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR CCA 90 bp GGGTCTGGGGAAGAGAGCCCCCATGGGAAAGAATCTGTGGCCTCCCTTTCCAGGCACTCCTCAGGGTTCTaGGCCCTGGACGTTGCCATG +
Preference number: 4 (lower is better)
Translates to: GSGEESPHGKESVASLSRHSSGF*ALDVAM
Trigger: CATGGCAACGTCCAGGGCCCAGAACCCTGAGGAGTG...CCTGGAAAGGGAGGCCACAGATTCTTTCCCATGGGGGCTCTCTTCCCCAGACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR CCA 90 bp ATCCACAACAGGCAGGTAAAAACCGACAGCTGGGGCTTAAGGGCCTCCCGGGAGGAGGGGCAGGGTTGCTaGGCTACAGGGATGCCAAGG +
Preference number: 4 (lower is better)
Translates to: IHNRQVKTDSWGLRASREEGQGC*ATGMPR
Trigger: CCTTGGCATCCCTGTAGCCCAGCAACCCTGCCCCTC...CTCCCGGGAGGCCCTTAAGCCCCAGCTGTCGGTTTTTACCTGCCTGTTGTGGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR TCA 90 bp CCTCCTCCATGTTCCCTGCACTCCAGTTCCGACCCCAGAGCAGGAGGGAAGACGGGACGTGCTCCCATCTaGCCGTTTGAATCGCCCTTT +
Preference number: 4 (lower is better)
Translates to: PPPCSLHSSSDPRAGGKTGRAPI*PFESPF
Trigger: AAAGGGCGATTCAAACGGTCAGATGGGAGCACGTCC...CGTCTTCCCTCCTGCTCTGGGGTCGGAACTGGAGTGCAGGGAACATGGAGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344140.5
ENST00000394310.7
CDS-3UTR TCA 90 bp CCTCCTCCATGTTCCCTGCACTCCAGTTCCGACCCCAGAGCAGGAGGGAAGACGCTGCCGTCACACGAGTaGTGGAGATCCTGCCATCAA +
Preference number: 4 (lower is better)
Translates to: PPPCSLHSSSDPRAGGKTLPSHE*WRSCHQ
Trigger: TTGATGGCAGGATCTCCATCACTCGTGTGACGGCAG...CGTCTTCCCTCCTGCTCTGGGGTCGGAACTGGAGTGCAGGGAACATGGAGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344140.5
ENST00000394310.7
CDS-3UTR TCA 90 bp ATCCACAACAGGCAGGTAAAAACCGACAGCTGGGGCTTAAGGGCCTCCCGGGAGAATACATGTCAGGTGTaGGCCCCTCGCTCCCTCCCC +
Preference number: 4 (lower is better)
Translates to: IHNRQVKTDSWGLRASRENTCQV*APRSLP
Trigger: GGGGAGGGAGCGAGGGGCTCACACCTGACATGTATT...CTCCCGGGAGGCCCTTAAGCCCCAGCTGTCGGTTTTTACCTGCCTGTTGTGGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR TCA 90 bp CGGGCAGGCCCCAGTCCTTGTTGGCACACTCGGCTCTCTCTGGCCCAGCTGGGAAGAAACCCCAAGCTTTaGGCAAAGGCATCTGAAAGG +
Preference number: 4 (lower is better)
Translates to: RAGPSPCWHTRLSLAQLGRNPKL*AKASER
Trigger: CCTTTCAGATGCCTTTGCTCAAAGCTTGGGGTTTCT...TCCCAGCTGGGCCAGAGAGAGCCGAGTGTGCCAACAAGGACTGGGGCCTGCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR GCA 90 bp CCTCCTCCATGTTCCCTGCACTCCAGTTCCGACCCCAGAGCAGGAGGGAAGACGATCGCCCTTTCCTCTTaGTGTATTTGCCCTGCGGGC +
Preference number: 4 (lower is better)
Translates to: PPPCSLHSSSDPRAGGKTIALSS*CICPAG
Trigger: GCCCGCAGGGCAAATACAGCAAGAGGAAAGGGCGAT...CGTCTTCCCTCCTGCTCTGGGGTCGGAACTGGAGTGCAGGGAACATGGAGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344140.5
ENST00000394310.7
CDS-3UTR GCA 90 bp CCCCTGCCTCTCAGCGAATGTAGACGCCTCGTCCCCAGCCCTCCAGCTCATTCTATCGCCCTTTCCTCTTaGTGTATTTGCCCTGCGGGC +
Preference number: 4 (lower is better)
Translates to: PLPLSECRRLVPSPPAHSIALSS*CICPAG
Trigger: GCCCGCAGGGCAAATACAGCAAGAGGAAAGGGCGAT...AGAATGAGCTGGAGGGCTGGGGACGAGGCGTCTACATTCGCTGAGAGGCAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622445.4
CDS-3UTR GCA 90 bp GGCTCAGATGCAGAGGGGCCCCCTCTACTAATGGCAGCAGGCAAGGGATGTTGGTTGGCCTTCTCGAGCTaGGCTAATGCCTGGCGCTCT +
Preference number: 4 (lower is better)
Translates to: GSDAEGPPLLMAAGKGCWLAFSS*ANAWRS
Trigger: AGAGCGCCAGGCATTAGCGCAGCTCGAGAAGGCCAA...CCAACATCCCTTGCCTGCTGCCATTAGTAGAGGGGGCCCCTCTGCATCTGAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR GCA 90 bp CCTCCTCCATGTTCCCTGCACTCCAGTTCCGACCCCAGAGCAGGAGGGAAGACGTGTCCGCACAGCAAATaGCACTGGCTTGGTCTTGGC +
Preference number: 4 (lower is better)
Translates to: PPPCSLHSSSDPRAGGKTCPHSK*HWLGLG
Trigger: GCCAAGACCAAGCCAGTGGCATTTGCTGTGCGGACA...CGTCTTCCCTCCTGCTCTGGGGTCGGAACTGGAGTGCAGGGAACATGGAGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344140.5
ENST00000394310.7
CDS-3UTR GCA 90 bp CTCAGGGCACAACATCTTCAGGCACCCACCCTTTCAACTCCCCGTGCATATCAGGTGTGGGGCGGCGGGTaGCAGTCACCACATCTCCCA +
Preference number: 4 (lower is better)
Translates to: LRAQHLQAPTLSTPRAYQVWGGG*QSPHLP
Trigger: TGGGAGATGTGGTGACTGGCACCCGCCGCCCCACAC...CTGATATGCACGGGGAGTTGAAAGGGTGGGTGCCTGAAGATGTTGTGCCCTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR GCA 90 bp CCTCCTCCATGTTCCCTGCACTCCAGTTCCGACCCCAGAGCAGGAGGGAAGACGTTGGCAGAGCCACTCTaGTCACCAAGCTCAGCCTCT +
Preference number: 4 (lower is better)
Translates to: PPPCSLHSSSDPRAGGKTLAEPL*SPSSAS
Trigger: AGAGGCTGAGCTTGGTGAGCAGAGTGGCTCTGCCAA...CGTCTTCCCTCCTGCTCTGGGGTCGGAACTGGAGTGCAGGGAACATGGAGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344140.5
CDS-3UTR GCA 90 bp GGCTCAGATGCAGAGGGGCCCCCTCTACTAATGGCAGCAGGCAAGGGATGTTGGCGCTCGATTTCACTCTaGACCTCAGCCAGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: GSDAEGPPLLMAAGKGCWRSISL*TSARLE
Trigger: CTCCAGCCTGGCTGAGGTGCAGAGTGAAATCGAGCG...CCAACATCCCTTGCCTGCTGCCATTAGTAGAGGGGGCCCCTCTGCATCTGAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR GCA 90 bp CCTCCTCCATGTTCCCTGCACTCCAGTTCCGACCCCAGAGCAGGAGGGAAGACGTACATGGCATGTTCCTaGTCCTGGGGCACCACACTG +
Preference number: 4 (lower is better)
Translates to: PPPCSLHSSSDPRAGGKTYMACS*SWGTTL
Trigger: CAGTGTGGTGCCCCAGGAGCAGGAACATGCCATGTA...CGTCTTCCCTCCTGCTCTGGGGTCGGAACTGGAGTGCAGGGAACATGGAGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344140.5
ENST00000394310.7
CDS-3UTR GCA 90 bp CATATCAGCAGCTCCCAGGTGCCTACGCTGACGACTATGTGGCGAGGACAAAGACTGGGTACTCGTGCATaGTGGCGTGCTCCCCGGTGG +
Preference number: 4 (lower is better)
Translates to: HISSSQVPTLTTMWRGQRLGTRA*WRAPRW
Trigger: CCACCGGGGAGCACGCCAGCATGCACGAGTACCCAG...TCTTTGTCCTCGCCACATAGTCGTCAGCGTAGGCACCTGGGAGCTGCTGATATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR GCA 90 bp AACCGACAGCTGGGGCTTAAGGGCCTCCCGGGAGCTGGGATGGTAACACCAAAGGTAGAGGGTGCTGTATaGCTGCCAGCTTCCACCCAG +
Preference number: 4 (lower is better)
Translates to: NRQLGLKGLPGAGMVTPKVEGAV*LPASTQ
Trigger: CTGGGTGGAAGCTGGCAGGCATACAGCACCCTCTAC...CTTTGGTGTTACCATCCCAGCTCCCGGGAGGCCCTTAAGCCCCAGCTGTCGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR CCA 90 bp AGGCCTCTCCTGGGGGAAGTGAACATGGGTAACAAACAGAATCACGAGAGGCAAGGCTCCCTCAGCGCATaGGAGAGGCCGTGGGAGCCG +
Preference number: 4 (lower is better)
Translates to: RPLLGEVNMGNKQNHERQGSLSA*ERPWEP
Trigger: CGGCTCCCACGGCCTCTCCCATGCGCTGAGGGAGCC...TTGCCTCTCGTGATTCTGTTTGTTACCCATGTTCACTTCCCCCAGGAGAGGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR CCA 90 bp CCTCCTCCATGTTCCCTGCACTCCAGTTCCGACCCCAGAGCAGGAGGGAAGACGGACATGCTGGTCTTCTaGACCATGGAGAGGAGCCTC +
Preference number: 4 (lower is better)
Translates to: PPPCSLHSSSDPRAGGKTDMLVF*TMERSL
Trigger: GAGGCTCCTCTCCATGGTCCAGAAGACCAGCATGTC...CGTCTTCCCTCCTGCTCTGGGGTCGGAACTGGAGTGCAGGGAACATGGAGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344140.5
ENST00000394310.7
CDS-3UTR CCA 90 bp CCTCCTCCATGTTCCCTGCACTCCAGTTCCGACCCCAGAGCAGGAGGGAAGACGGGCGGACAAAGCTGTTaGATGTGGTATCCGAGGACG +
Preference number: 4 (lower is better)
Translates to: PPPCSLHSSSDPRAGGKTGGQSC*MWYPRT
Trigger: CGTCCTCGGATACCACATCCAACAGCTTTGTCCGCC...CGTCTTCCCTCCTGCTCTGGGGTCGGAACTGGAGTGCAGGGAACATGGAGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344140.5
ENST00000394310.7
CDS-3UTR CCA 90 bp CCTCCTCCATGTTCCCTGCACTCCAGTTCCGACCCCAGAGCAGGAGGGAAGACGAGCTGCGCTAATGCCTaGCGCTCTGCTTCCTTCCTT +
Preference number: 4 (lower is better)
Translates to: PPPCSLHSSSDPRAGGKTSCANA*RSASFL
Trigger: AAGGAAGGAAGCAGAGCGCCAGGCATTAGCGCAGCT...CGTCTTCCCTCCTGCTCTGGGGTCGGAACTGGAGTGCAGGGAACATGGAGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344140.5
ENST00000394310.7
CDS-3UTR CCA 90 bp CCTCCTCCATGTTCCCTGCACTCCAGTTCCGACCCCAGAGCAGGAGGGAAGACGAGGCACCTCATCCCCTaGAGACGGATTGTAGCCAAC +
Preference number: 4 (lower is better)
Translates to: PPPCSLHSSSDPRAGGKTRHLIP*RRIVAN
Trigger: GTTGGCTACAATCCGTCTCCAGGGGATGAGGTGCCT...CGTCTTCCCTCCTGCTCTGGGGTCGGAACTGGAGTGCAGGGAACATGGAGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344140.5
ENST00000394310.7
CDS-3UTR CCA 90 bp CCTCCTCCATGTTCCCTGCACTCCAGTTCCGACCCCAGAGCAGGAGGGAAGACGACTTCTGCTTCTGTTTaGCACTGGCAGGGGGTGTGG +
Preference number: 4 (lower is better)
Translates to: PPPCSLHSSSDPRAGGKTTSASV*HWQGVW
Trigger: CCACACCCCCTGCCAGTGCCAAACAGAAGCAGAAGT...CGTCTTCCCTCCTGCTCTGGGGTCGGAACTGGAGTGCAGGGAACATGGAGGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394310.7
CDS-3UTR CCA 90 bp AAGACAAGCTCCCCATGGGGTGTCCATGCTATGGCTTTCACCGACCAGACGATGGGTGGCCCGTTCCAGTaGCTGGTCCCCGGAAGCAAG +
Preference number: 4 (lower is better)
Translates to: KTSSPWGVHAMAFTDQTMGGPFQ*LVPGSK
Trigger: CTTGCTTCCGGGGACCAGCCACTGGAACGGGCCACC...CATCGTCTGGTCGGTGAAAGCCATAGCATGGACACCCCATGGGGAGCTTGTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR CCA 90 bp TATCAGCAGCTCCCAGGTGCCTACGCTGACGACTATGTGGCGAGGACAAAGAAGCTGGCCCAGCTCCCCTaGGTACTCGTGCATGCTGGC +
Preference number: 4 (lower is better)
Translates to: YQQLPGAYADDYVARTKKLAQLP*VLVHAG
Trigger: GCCAGCATGCACGAGTACCCAGGGGAGCTGGGCCAG...CTTCTTTGTCCTCGCCACATAGTCGTCAGCGTAGGCACCTGGGAGCTGCTGATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR CCA 90 bp TGCCCATCCCTGAGGCGGGCAGCCGGGCAGGCCCCAGTCCTTGTTGGCACACTCATGGGAAAGAATCTGTaGCCTCCCTTTCCAGGAAAA +
Preference number: 4 (lower is better)
Translates to: CPSLRRAAGQAPVLVGTLMGKNL*PPFPGK
Trigger: TTTTCCTGGAAAGGGAGGCCACAGATTCTTTCCCAT...GAGTGTGCCAACAAGGACTGGGGCCTGCCCGGCTGCCCGCCTCAGGGATGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR CCA 90 bp CCTCTCAGCGAATGTAGACGCCTCGTCCCCAGCCCTCCAGCTCATTCTTGTTGCCTTGGATCTGGGGTCTaGGGAAGAGAGCCCCCATGG +
Preference number: 4 (lower is better)
Translates to: PLSECRRLVPSPPAHSCCLGSGV*GREPPW
Trigger: CCATGGGGGCTCTCTTCCCCAGACCCCAGATCCAAG...GCAACAAGAATGAGCTGGAGGGCTGGGGACGAGGCGTCTACATTCGCTGAGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000622445.4
CDS-3UTR TCA 90 bp CCTCCTCCATGTTCCCTGCACTCCAGTTCCGACCCCAGAGCAGGAGGGAAGACGTCCCATCTGACCGTTTaGATCGCCCTTTCCTCTTGC +
Preference number: 4 (lower is better)
Translates to: PPPCSLHSSSDPRAGGKTSHLTV*IALSSC
Trigger: GCAAGAGGAAAGGGCGATTCAAACGGTCAGATGGGA...CGTCTTCCCTCCTGCTCTGGGGTCGGAACTGGAGTGCAGGGAACATGGAGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344140.5
ENST00000394310.7
CDS-3UTR TCA 90 bp ATCCACAACAGGCAGGTAAAAACCGACAGCTGGGGCTTAAGGGCCTCCCGGGAGACTGGAGTTATCGCCTaGTTTGCTGGAGCCGAGGCG +
Preference number: 4 (lower is better)
Translates to: IHNRQVKTDSWGLRASRETGVIA*FAGAEA
Trigger: CGCCTCGGCTCCAGCAAATCAGGCGATAACTCCAGT...CTCCCGGGAGGCCCTTAAGCCCCAGCTGTCGGTTTTTACCTGCCTGTTGTGGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR TCA 90 bp CCTCCTCCATGTTCCCTGCACTCCAGTTCCGACCCCAGAGCAGGAGGGAAGACGGGGGTTGTTGAGAACTaGGCGCTTAGCCAGGGAAAT +
Preference number: 4 (lower is better)
Translates to: PPPCSLHSSSDPRAGGKTGVVEN*ALSQGN
Trigger: ATTTCCCTGGCTAAGCGCTCAGTTCTCAACAACCCC...CGTCTTCCCTCCTGCTCTGGGGTCGGAACTGGAGTGCAGGGAACATGGAGGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344140.5
ENST00000394310.7
CDS-3UTR TCA 90 bp AACCGACAGCTGGGGCTTAAGGGCCTCCCGGGAGCTGGGATGGTAACACCAAAGTTGAGCAAAGGCATCTaGAAGGAGGGAGACAGCGCC +
Preference number: 4 (lower is better)
Translates to: NRQLGLKGLPGAGMVTPKLSKGI*KEGDSA
Trigger: GGCGCTGTCTCCCTCCTTTCAGATGCCTTTGCTCAA...CTTTGGTGTTACCATCCCAGCTCCCGGGAGGCCCTTAAGCCCCAGCTGTCGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR TCA 90 bp CCGTGTAGGCAGAGTTTCGGCTGCCGGGGGTGTCGGCATCAAAAGTGTCTTGGCTTGAGCAAAGGCATCTaGAAGGAGGGAGACAGCGCC +
Preference number: 4 (lower is better)
Translates to: PCRQSFGCRGCRHQKCLGLSKGI*KEGDSA
Trigger: GGCGCTGTCTCCCTCCTTTCAGATGCCTTTGCTCAA...GCCAAGACACTTTTGATGCCGACACCCCCGGCAGCCGAAACTCTGCCTACACGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000622445.4
CDS-3UTR GCA 90 bp GGCTCAGATGCAGAGGGGCCCCCTCTACTAATGGCAGCAGGCAAGGGATGTTGGCCAGCTCATTCTTGTTaGGCCCCAAAACTGGACCCC +
Preference number: 4 (lower is better)
Translates to: GSDAEGPPLLMAAGKGCWPAHSC*APKLDP
Trigger: GGGGTCCAGTTTTGGGGCGCAACAAGAATGAGCTGG...CCAACATCCCTTGCCTGCTGCCATTAGTAGAGGGGGCCCCTCTGCATCTGAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR GCA 90 bp AGGGATGTTGGAGGCCAAGCTCATTCCTGGGGTAGGCAAAGGCTGAGGCATGGATCACCGACCAGACGATaGTGCCAGGAAGCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: RDVGGQAHSWGRQRLRHGSPTRR*CQEAGR
Trigger: CCTCCCAGCTTCCTGGCAGCATCGTCTGGTCGGTGA...TCCATGCCTCAGCCTTTGCCTACCCCAGGAATGAGCTTGGCCTCCAACATCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR GCA 90 bp GGTCTGGGGAAGAGAGCCCCCATGGGAAAGAATCTGTGGCCTCCCTTTCCAGGAAGGGTGCTGTATGCCTaGCAGCTTCCACCCAGAACC +
Preference number: 4 (lower is better)
Translates to: GLGKRAPMGKNLWPPFPGRVLYA*QLPPRT
Trigger: GGTTCTGGGTGGAAGCTGGCAGGCATACAGCACCCT...TCCTGGAAAGGGAGGCCACAGATTCTTTCCCATGGGGGCTCTCTTCCCCAGACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR GCA 90 bp GGTGCCTACGCTGACGACTATGTGGCGAGGACAAAGAAGCAGGCTTGGGAGGCATCAGTAAGTGGAAGCTaGACCCCACCCCCAGGTGGA +
Preference number: 4 (lower is better)
Translates to: GAYADDYVARTKKQAWEASVSGS*TPPPGG
Trigger: TCCACCTGGGGGTGGGGTGCAGCTTCCACTTACTGA...TGCCTCCCAAGCCTGCTTCTTTGTCCTCGCCACATAGTCGTCAGCGTAGGCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR CCA 90 bp CCTCCTCCATGTTCCCTGCACTCCAGTTCCGACCCCAGAGCAGGAGGGAAGACGCAAAGCTGTTGGATGTaGTATCCGAGGACGTGCTCC +
Preference number: 4 (lower is better)
Translates to: PPPCSLHSSSDPRAGGKTQSCWM*YPRTCS
Trigger: GGAGCACGTCCTCGGATACCACATCCAACAGCTTTG...CGTCTTCCCTCCTGCTCTGGGGTCGGAACTGGAGTGCAGGGAACATGGAGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344140.5
ENST00000394310.7
CDS-3UTR CCA 90 bp GGGTCTGGGGAAGAGAGCCCCCATGGGAAAGAATCTGTGGCCTCCCTTTCCAGGAGCTGCGCTAATGCCTaGCGCTCTGCTTCCTTCCTT +
Preference number: 4 (lower is better)
Translates to: GSGEESPHGKESVASLSRSCANA*RSASFL
Trigger: AAGGAAGGAAGCAGAGCGCCAGGCATTAGCGCAGCT...CCTGGAAAGGGAGGCCACAGATTCTTTCCCATGGGGGCTCTCTTCCCCAGACCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR CCA 90 bp CCTCCTCCATGTTCCCTGCACTCCAGTTCCGACCCCAGAGCAGGAGGGAAGACGCAAATGCCACTGGCTTaGTCTTGGCCTTCTCGAGCT +
Preference number: 4 (lower is better)
Translates to: PPPCSLHSSSDPRAGGKTQMPLA*SWPSRA
Trigger: AGCTCGAGAAGGCCAAGACCAAGCCAGTGGCATTTG...CGTCTTCCCTCCTGCTCTGGGGTCGGAACTGGAGTGCAGGGAACATGGAGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344140.5
ENST00000394310.7
CDS-3UTR CCA 90 bp CCTCCTCCATGTTCCCTGCACTCCAGTTCCGACCCCAGAGCAGGAGGGAAGACGCACAGCAAATGCCACTaGCTTGGTCTTGGCCTTCTC +
Preference number: 4 (lower is better)
Translates to: PPPCSLHSSSDPRAGGKTHSKCH*LGLGLL
Trigger: GAGAAGGCCAAGACCAAGCCAGTGGCATTTGCTGTG...CGTCTTCCCTCCTGCTCTGGGGTCGGAACTGGAGTGCAGGGAACATGGAGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344140.5
ENST00000394310.7
CDS-3UTR CCA 90 bp CCGTTCCAGTGGCTGGTCCCCGGAAGCAAGGTAGGGTCCCTGGAGGTTGGAGACCTCCCAGACTGGAACTaGAGTTATCGCCTGATTTGC +
Preference number: 4 (lower is better)
Translates to: PFQWLVPGSKVGSLEVGDLPDWN*SYRLIC
Trigger: GCAAATCAGGCGATAACTCCAGTTCCAGTCTGGGAG...GTCTCCAACCTCCAGGGACCCTACCTTGCTTCCGGGGACCAGCCACTGGAACGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622445.4
CDS-3UTR CCA 90 bp ATGGGAGAAAGGGGACACTTCAGAAAGGTGGGTATCCCCCATCCATCCACAACACAGCAGCGGATTGGGTaGCGTGCTGCTGGGCGGGTG +
Preference number: 4 (lower is better)
Translates to: MGERGHFRKVGIPHPSTTQQRIG*RAAGRV
Trigger: CACCCGCCCAGCAGCACGCCACCCAATCCGCTGCTG...TGTTGTGGATGGATGGGGGATACCCACCTTTCTGAAGTGTCCCCTTTCTCCCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR CCA 90 bp GGTCTGGGGAAGAGAGCCCCCATGGGAAAGAATCTGTGGCCTCCCTTTCCAGGAGGGCCTCCCGGGAGCTaGGATGGTAACACCAAAGAA +
Preference number: 4 (lower is better)
Translates to: GLGKRAPMGKNLWPPFPGGPPGS*DGNTKE
Trigger: TTCTTTGGTGTTACCATCCCAGCTCCCGGGAGGCCC...TCCTGGAAAGGGAGGCCACAGATTCTTTCCCATGGGGGCTCTCTTCCCCAGACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR CCA 90 bp GCCACGGAGGGTAGAGGGTGCTGTATGCCTGCCAGCTTCCACCCAGAACCCTCCGACACTTCAGAAAGGTaGGTATCCCCCATCCATCCA +
Preference number: 4 (lower is better)
Translates to: ATEGRGCCMPASFHPEPSDTSER*VSPIHP
Trigger: TGGATGGATGGGGGATACCCACCTTTCTGAAGTGTC...GGAGGGTTCTGGGTGGAAGCTGGCAGGCATACAGCACCCTCTACCCTCCGTGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR CCA 90 bp ATCCACAACAGGCAGGTAAAAACCGACAGCTGGGGCTTAAGGGCCTCCCGGGAGCCCAGTACTGCAGCTTaGGAGAAGGAGAGCCATCCC +
Preference number: 4 (lower is better)
Translates to: IHNRQVKTDSWGLRASREPSTAA*EKESHP
Trigger: GGGATGGCTCTCCTTCTCCCAAGCTGCAGTACTGGG...CTCCCGGGAGGCCCTTAAGCCCCAGCTGTCGGTTTTTACCTGCCTGTTGTGGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR CCA 90 bp GGTGCCTACGCTGACGACTATGTGGCGAGGACAAAGAAGCAGGCTTGGGAGGCACCCAGTACTGCAGCTTaGGAGAAGGAGAGCCATCCC +
Preference number: 4 (lower is better)
Translates to: GAYADDYVARTKKQAWEAPSTAA*EKESHP
Trigger: GGGATGGCTCTCCTTCTCCCAAGCTGCAGTACTGGG...TGCCTCCCAAGCCTGCTTCTTTGTCCTCGCCACATAGTCGTCAGCGTAGGCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR CCA 90 bp GAGAAAGGGGACACTTCAGAAAGGTGGGTATCCCCCATCCATCCACAACAGGCACAGGGTTCTGGGCCCTaGACGTTGCCATGGCCACGG +
Preference number: 4 (lower is better)
Translates to: EKGDTSERWVSPIHPQQAQGSGP*TLPWPR
Trigger: CCGTGGCCATGGCAACGTCCAGGGCCCAGAACCCTG...TGCCTGTTGTGGATGGATGGGGGATACCCACCTTTCTGAAGTGTCCCCTTTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR CCA 90 bp GGTCTGGGGAAGAGAGCCCCCATGGGAAAGAATCTGTGGCCTCCCTTTCCAGGAGGCCAAGCTCATTCCTaGGGTAGGCAAAGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: GLGKRAPMGKNLWPPFPGGQAHS*GRQRLR
Trigger: CCTCAGCCTTTGCCTACCCCAGGAATGAGCTTGGCC...TCCTGGAAAGGGAGGCCACAGATTCTTTCCCATGGGGGCTCTCTTCCCCAGACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR CCA 90 bp TATCAGCAGCTCCCAGGTGCCTACGCTGACGACTATGTGGCGAGGACAAAGAAGCAGGTGGCACAGGGATaGGGGGCTCAGATGCAGAGG +
Preference number: 4 (lower is better)
Translates to: YQQLPGAYADDYVARTKKQVAQG*GAQMQR
Trigger: CCTCTGCATCTGAGCCCCCCATCCCTGTGCCACCTG...CTTCTTTGTCCTCGCCACATAGTCGTCAGCGTAGGCACCTGGGAGCTGCTGATA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR CCA 90 bp CATATCAGCAGCTCCCAGGTGCCTACGCTGACGACTATGTGGCGAGGACAAAGACAGGTGGCACAGGGATaGGGGGCTCAGATGCAGAGG +
Preference number: 4 (lower is better)
Translates to: HISSSQVPTLTTMWRGQRQVAQG*GAQMQR
Trigger: CCTCTGCATCTGAGCCCCCCATCCCTGTGCCACCTG...TCTTTGTCCTCGCCACATAGTCGTCAGCGTAGGCACCTGGGAGCTGCTGATATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR TCA 90 bp GGCTCAGATGCAGAGGGGCCCCCTCTACTAATGGCAGCAGGCAAGGGATGTTGGTCCCATCTGACCGTTTaGATCGCCCTTTCCTCTTGC +
Preference number: 4 (lower is better)
Translates to: GSDAEGPPLLMAAGKGCWSHLTV*IALSSC
Trigger: GCAAGAGGAAAGGGCGATTCAAACGGTCAGATGGGA...CCAACATCCCTTGCCTGCTGCCATTAGTAGAGGGGGCCCCTCTGCATCTGAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR TCA 90 bp CCTCCTCCATGTTCCCTGCACTCCAGTTCCGACCCCAGAGCAGGAGGGAAGACGAGATACATCAGAGTCTaGTGGACGGCTGGTGTAGGA +
Preference number: 4 (lower is better)
Translates to: PPPCSLHSSSDPRAGGKTRYIRV*WTAGVG
Trigger: TCCTACACCAGCCGTCCATCAGACTCTGATGTATCT...CGTCTTCCCTCCTGCTCTGGGGTCGGAACTGGAGTGCAGGGAACATGGAGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344140.5
ENST00000394310.7
CDS-3UTR TCA 90 bp ACAGGAGGTGGCGAGACAGGCATGAGGTGCCCATCCCTGAGGCGGGCAGCCGGGTATTGTATTTCTCCTTaGTGTGCAGGAAGTCTTTGG +
Preference number: 4 (lower is better)
Translates to: TGGGETGMRCPSLRRAAGYCISP*CAGSLW
Trigger: CCAAAGACTTCCTGCACATCAAGGAGAAATACAATA...CCCGGCTGCCCGCCTCAGGGATGGGCACCTCATGCCTGTCTCGCCACCTCCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR TCA 90 bp CCAAGACAAGCTCCCCATGGGGTGTCCATGCTATGGCTTTCACCGACCAGACGAACTGGAGTTATCGCCTaGTTTGCTGGAGCCGAGGCG +
Preference number: 4 (lower is better)
Translates to: PRQAPHGVSMLWLSPTRRTGVIA*FAGAEA
Trigger: CGCCTCGGCTCCAGCAAATCAGGCGATAACTCCAGT...TCGTCTGGTCGGTGAAAGCCATAGCATGGACACCCCATGGGGAGCTTGTCTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR TCA 90 bp CTCAGGGCACAACATCTTCAGGCACCCACCCTTTCAACTCCCCGTGCATATCAGACGGTCCCACCAGGATaGTGGGCCTCATGGAAGGCA +
Preference number: 4 (lower is better)
Translates to: LRAQHLQAPTLSTPRAYQTVPPG*WASWKA
Trigger: TGCCTTCCATGAGGCCCATCATCCTGGTGGGACCGT...CTGATATGCACGGGGAGTTGAAAGGGTGGGTGCCTGAAGATGTTGTGCCCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR TCA 90 bp CCGTGTAGGCAGAGTTTCGGCTGCCGGGGGTGTCGGCATCAAAAGTGTCTTGGCGGGGTTGTTGAGAACTaGGCGCTTAGCCAGGGAAAT +
Preference number: 4 (lower is better)
Translates to: PCRQSFGCRGCRHQKCLGGVVEN*ALSQGN
Trigger: ATTTCCCTGGCTAAGCGCTCAGTTCTCAACAACCCC...GCCAAGACACTTTTGATGCCGACACCCCCGGCAGCCGAAACTCTGCCTACACGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000622445.4
CDS-3UTR TCA 90 bp CCTCCTCCATGTTCCCTGCACTCCAGTTCCGACCCCAGAGCAGGAGGGAAGACGGACTTGATGAGCCTTTaGAGTACCTTGGGAGAGGTG +
Preference number: 4 (lower is better)
Translates to: PPPCSLHSSSDPRAGGKTDLMSL*STLGEV
Trigger: CACCTCTCCCAAGGTACTTCAAAGGCTCATCAAGTC...CGTCTTCCCTCCTGCTCTGGGGTCGGAACTGGAGTGCAGGGAACATGGAGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344140.5
ENST00000394310.7
CDS-3UTR TCA 90 bp CCTCCTCCATGTTCCCTGCACTCCAGTTCCGACCCCAGAGCAGGAGGGAAGACGTTGAGGTGTTTGGACTaGGACTTTCCTCGGGACTTG +
Preference number: 4 (lower is better)
Translates to: PPPCSLHSSSDPRAGGKTLRCLD*DFPRDL
Trigger: CAAGTCCCGAGGAAAGTCTCAGTCCAAACACCTCAA...CGTCTTCCCTCCTGCTCTGGGGTCGGAACTGGAGTGCAGGGAACATGGAGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344140.5
ENST00000394310.7
CDS-3UTR TCA 90 bp ATGGGAGAAAGGGGACACTTCAGAAAGGTGGGTATCCCCCATCCATCCACAACAAAGGGGCAGGCAGGGTaGGGGACCTTGGATCTGGGG +
Preference number: 4 (lower is better)
Translates to: MGERGHFRKVGIPHPSTTKGQAG*GTLDLG
Trigger: CCCCAGATCCAAGGTCCCTCACCCTGCCTGCCCCTT...TGTTGTGGATGGATGGGGGATACCCACCTTTCTGAAGTGTCCCCTTTCTCCCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR GCA 90 bp ATGGGAGAAAGGGGACACTTCAGAAAGGTGGGTATCCCCCATCCATCCACAACAGCTGGCAGCCAGGGCTaGGGTAGCCATGGTGCGGTT +
Preference number: 4 (lower is better)
Translates to: MGERGHFRKVGIPHPSTTAGSQG*GSHGAV
Trigger: AACCGCACCATGGCTACCGCAGCCCTGGCTGCCAGC...TGTTGTGGATGGATGGGGGATACCCACCTTTCTGAAGTGTCCCCTTTCTCCCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR GCA 90 bp AAGACAAGCTCCCCATGGGGTGTCCATGCTATGGCTTTCACCGACCAGACGATGAGGCAGAGTTTCGGCTaGCGGGGGTGTCGGCATCAA +
Preference number: 4 (lower is better)
Translates to: KTSSPWGVHAMAFTDQTMRQSFG*RGCRHQ
Trigger: TTGATGCCGACACCCCCGGCAGCCGAAACTCTGCCT...CATCGTCTGGTCGGTGAAAGCCATAGCATGGACACCCCATGGGGAGCTTGTCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR GCA 90 bp TATCAGCAGCTCCCAGGTGCCTACGCTGACGACTATGTGGCGAGGACAAAGAAGGTGTGGAGCTGGGACTaGCCAAGCAGCTCCTGGCTT +
Preference number: 4 (lower is better)
Translates to: YQQLPGAYADDYVARTKKVWSWD*PSSSWL
Trigger: AAGCCAGGAGCTGCTTGGGCAGTCCCAGCTCCACAC...CTTCTTTGTCCTCGCCACATAGTCGTCAGCGTAGGCACCTGGGAGCTGCTGATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR GCA 90 bp CATATCAGCAGCTCCCAGGTGCCTACGCTGACGACTATGTGGCGAGGACAAAGAGTGTGGAGCTGGGACTaGCCAAGCAGCTCCTGGCTT +
Preference number: 4 (lower is better)
Translates to: HISSSQVPTLTTMWRGQRVWSWD*PSSSWL
Trigger: AAGCCAGGAGCTGCTTGGGCAGTCCCAGCTCCACAC...TCTTTGTCCTCGCCACATAGTCGTCAGCGTAGGCACCTGGGAGCTGCTGATATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR CCA 90 bp TATCAGCAGCTCCCAGGTGCCTACGCTGACGACTATGTGGCGAGGACAAAGAAGGGCCCCGGGACATGCTaGTCTTCTGGACCATGGAGA +
Preference number: 4 (lower is better)
Translates to: YQQLPGAYADDYVARTKKGPGTC*SSGPWR
Trigger: TCTCCATGGTCCAGAAGACCAGCATGTCCCGGGGCC...CTTCTTTGTCCTCGCCACATAGTCGTCAGCGTAGGCACCTGGGAGCTGCTGATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR CCA 90 bp AAGACAAGCTCCCCATGGGGTGTCCATGCTATGGCTTTCACCGACCAGACGATGATTTGCCCTGCGGGCTaGGGTCGAAGACCTCCATGG +
Preference number: 4 (lower is better)
Translates to: KTSSPWGVHAMAFTDQTMICPAG*GRRPPW
Trigger: CCATGGAGGTCTTCGACCCCAGCCCGCAGGGCAAAT...CATCGTCTGGTCGGTGAAAGCCATAGCATGGACACCCCATGGGGAGCTTGTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR CCA 90 bp CCTCCTCCATGTTCCCTGCACTCCAGTTCCGACCCCAGAGCAGGAGGGAAGACGCTCCCAGACTGGAACTaGAGTTATCGCCTGATTTGC +
Preference number: 4 (lower is better)
Translates to: PPPCSLHSSSDPRAGGKTLPDWN*SYRLIC
Trigger: GCAAATCAGGCGATAACTCCAGTTCCAGTCTGGGAG...CGTCTTCCCTCCTGCTCTGGGGTCGGAACTGGAGTGCAGGGAACATGGAGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344140.5
ENST00000394310.7
CDS-3UTR CCA 90 bp CCTCCTCCATGTTCCCTGCACTCCAGTTCCGACCCCAGAGCAGGAGGGAAGACGTCCGAGGCCGCTATTTaGACATTGAGGTGTTTGGAC +
Preference number: 4 (lower is better)
Translates to: PPPCSLHSSSDPRAGGKTSEAAI*TLRCLD
Trigger: GTCCAAACACCTCAATGTCCAAATAGCGGCCTCGGA...CGTCTTCCCTCCTGCTCTGGGGTCGGAACTGGAGTGCAGGGAACATGGAGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344140.5
ENST00000394310.7
CDS-3UTR CCA 90 bp CATATCAGCAGCTCCCAGGTGCCTACGCTGACGACTATGTGGCGAGGACAAAGAGACCAGAGTGTTCCATaGGCTCCACACCCAGGTGGC +
Preference number: 4 (lower is better)
Translates to: HISSSQVPTLTTMWRGQRDQSVP*APHPGG
Trigger: GCCACCTGGGTGTGGAGCCCATGGAACACTCTGGTC...TCTTTGTCCTCGCCACATAGTCGTCAGCGTAGGCACCTGGGAGCTGCTGATATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR TCA 90 bp GAGAAAGGGGACACTTCAGAAAGGTGGGTATCCCCCATCCATCCACAACAGGCAACGGTCCCACCAGGATaGTGGGCCTCATGGAAGGCA +
Preference number: 4 (lower is better)
Translates to: EKGDTSERWVSPIHPQQATVPPG*WASWKA
Trigger: TGCCTTCCATGAGGCCCATCATCCTGGTGGGACCGT...TGCCTGTTGTGGATGGATGGGGGATACCCACCTTTCTGAAGTGTCCCCTTTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR TCA 90 bp GGCTCAGATGCAGAGGGGCCCCCTCTACTAATGGCAGCAGGCAAGGGATGTTGGTTGAGGTGTTTGGACTaGGACTTTCCTCGGGACTTG +
Preference number: 4 (lower is better)
Translates to: GSDAEGPPLLMAAGKGCWLRCLD*DFPRDL
Trigger: CAAGTCCCGAGGAAAGTCTCAGTCCAAACACCTCAA...CCAACATCCCTTGCCTGCTGCCATTAGTAGAGGGGGCCCCTCTGCATCTGAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR GCA 90 bp CATATCAGCAGCTCCCAGGTGCCTACGCTGACGACTATGTGGCGAGGACAAAGAGTAGAGGGTGCTGTATaGCTGCCAGCTTCCACCCAG +
Preference number: 4 (lower is better)
Translates to: HISSSQVPTLTTMWRGQRVEGAV*LPASTQ
Trigger: CTGGGTGGAAGCTGGCAGGCATACAGCACCCTCTAC...TCTTTGTCCTCGCCACATAGTCGTCAGCGTAGGCACCTGGGAGCTGCTGATATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR GCA 90 bp TATCAGCAGCTCCCAGGTGCCTACGCTGACGACTATGTGGCGAGGACAAAGAAGACGGAGGGTAGAGGGTaGTGTATGCCTGCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: YQQLPGAYADDYVARTKKTEGRG*CMPASF
Trigger: GAAGCTGGCAGGCATACAGCACCCTCTACCCTCCGT...CTTCTTTGTCCTCGCCACATAGTCGTCAGCGTAGGCACCTGGGAGCTGCTGATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR GCA 90 bp ACTTCAGAAAGGTGGGTATCCCCCATCCATCCACAACAGGCAGGTAAAAACCGAGGGGAGGGGCAGGGTTaGTGGGCTACAGGGATGCCA +
Preference number: 4 (lower is better)
Translates to: TSERWVSPIHPQQAGKNRGEGQG*WATGMP
Trigger: TGGCATCCCTGTAGCCCAGCAACCCTGCCCCTCCCC...TCGGTTTTTACCTGCCTGTTGTGGATGGATGGGGGATACCCACCTTTCTGAAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR GCA 90 bp CATATCAGCAGCTCCCAGGTGCCTACGCTGACGACTATGTGGCGAGGACAAAGATCAGTAAGTGGAAGCTaGACCCCACCCCCAGGTGGA +
Preference number: 4 (lower is better)
Translates to: HISSSQVPTLTTMWRGQRSVSGS*TPPPGG
Trigger: TCCACCTGGGGGTGGGGTGCAGCTTCCACTTACTGA...TCTTTGTCCTCGCCACATAGTCGTCAGCGTAGGCACCTGGGAGCTGCTGATATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR GCA 90 bp AGGGATGTTGGAGGCCAAGCTCATTCCTGGGGTAGGCAAAGGCTGAGGCATGGACCTTTCAACTCCCCGTaGATATCAGCAGCTCCCAGG +
Preference number: 4 (lower is better)
Translates to: RDVGGQAHSWGRQRLRHGPFNSP*ISAAPR
Trigger: CCTGGGAGCTGCTGATATGCACGGGGAGTTGAAAGG...TCCATGCCTCAGCCTTTGCCTACCCCAGGAATGAGCTTGGCCTCCAACATCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR CCA 90 bp CCTTTGAAGTACCTTGGGAGAGGTGATCTTGATGTAAACAATGATGGGGGCCAGGCATGGGAGAGGCCGTaGGAGCCGAAAGCAGCGCGG +
Preference number: 4 (lower is better)
Translates to: PLKYLGRGDLDVNNDGGQAWERP*EPKAAR
Trigger: CCGCGCTGCTTTCGGCTCCCACGGCCTCTCCCATGC...CTGGCCCCCATCATTGTTTACATCAAGATCACCTCTCCCAAGGTACTTCAAAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000622445.4
CDS-3UTR CCA 90 bp GGCTCAGATGCAGAGGGGCCCCCTCTACTAATGGCAGCAGGCAAGGGATGTTGGTCCGAGGCCGCTATTTaGACATTGAGGTGTTTGGAC +
Preference number: 4 (lower is better)
Translates to: GSDAEGPPLLMAAGKGCWSEAAI*TLRCLD
Trigger: GTCCAAACACCTCAATGTCCAAATAGCGGCCTCGGA...CCAACATCCCTTGCCTGCTGCCATTAGTAGAGGGGGCCCCTCTGCATCTGAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR CCA 90 bp CTCAGGGCACAACATCTTCAGGCACCCACCCTTTCAACTCCCCGTGCATATCAGTGCTGGGCGGGTGTGTaGCCTTCCAATAGGCTTCCA +
Preference number: 4 (lower is better)
Translates to: LRAQHLQAPTLSTPRAYQCWAGV*PSNRLP
Trigger: TGGAAGCCTATTGGAAGGCCACACACCCGCCCAGCA...CTGATATGCACGGGGAGTTGAAAGGGTGGGTGCCTGAAGATGTTGTGCCCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR CCA 90 bp ACTTCAGAAAGGTGGGTATCCCCCATCCATCCACAACAGGCAGGTAAAAACCGACTGGCCCAGCTCCCCTaGGTACTCGTGCATGCTGGC +
Preference number: 4 (lower is better)
Translates to: TSERWVSPIHPQQAGKNRLAQLP*VLVHAG
Trigger: GCCAGCATGCACGAGTACCCAGGGGAGCTGGGCCAG...TCGGTTTTTACCTGCCTGTTGTGGATGGATGGGGGATACCCACCTTTCTGAAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR CCA 90 bp AAGACAAGCTCCCCATGGGGTGTCCATGCTATGGCTTTCACCGACCAGACGATGGTAAAAACCGACAGCTaGGGCTTAAGGGCCTCCCGG +
Preference number: 4 (lower is better)
Translates to: KTSSPWGVHAMAFTDQTMVKTDS*GLRASR
Trigger: CCGGGAGGCCCTTAAGCCCCAGCTGTCGGTTTTTAC...CATCGTCTGGTCGGTGAAAGCCATAGCATGGACACCCCATGGGGAGCTTGTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR CCA 90 bp CGCAGTAGCGGGCCTTATTCCGGCCCCGGTTCCGGTTGTCGGTCAGCTCTTCCTATGGGAAAGAATCTGTaGCCTCCCTTTCCAGGAAAA +
Preference number: 4 (lower is better)
Translates to: RSSGPYSGPGSGCRSALPMGKNL*PPFPGK
Trigger: TTTTCCTGGAAAGGGAGGCCACAGATTCTTTCCCAT...AGGAAGAGCTGACCGACAACCGGAACCGGGGCCGGAATAAGGCCCGCTACTGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622445.4
CDS-3UTR CCA 90 bp CCTCTGAGGGGTCAGTCTCCATGTCCACACATGAGTCTCCCAGCTCCGTGTAGGAAGACAAGCTCCCCATaGGGTGTCCATGCTATGGCT +
Preference number: 4 (lower is better)
Translates to: PLRGQSPCPHMSLPAPCRKTSSP*GVHAMA
Trigger: AGCCATAGCATGGACACCCCATGGGGAGCTTGTCTT...CCTACACGGAGCTGGGAGACTCATGTGTGGACATGGAGACTGACCCCTCAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622445.4
CDS-3UTR CCA 90 bp GAGAAAGGGGACACTTCAGAAAGGTGGGTATCCCCCATCCATCCACAACAGGCAGGCCCCAGTCCTTGTTaGCACACTCGGCTCTCTCTG +
Preference number: 4 (lower is better)
Translates to: EKGDTSERWVSPIHPQQAGPSPC*HTRLSL
Trigger: CAGAGAGAGCCGAGTGTGCCAACAAGGACTGGGGCC...TGCCTGTTGTGGATGGATGGGGGATACCCACCTTTCTGAAGTGTCCCCTTTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR CCA 90 bp GGTGCCTACGCTGACGACTATGTGGCGAGGACAAAGAAGCAGGCTTGGGAGGCAACAAAGAAGCAGGCTTaGGAGGCAGCCACAAAGGAC +
Preference number: 4 (lower is better)
Translates to: GAYADDYVARTKKQAWEATKKQA*EAATKD
Trigger: GTCCTTTGTGGCTGCCTCCCAAGCCTGCTTCTTTGT...TGCCTCCCAAGCCTGCTTCTTTGTCCTCGCCACATAGTCGTCAGCGTAGGCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR TCA 90 bp CCTCTGAGGGGTCAGTCTCCATGTCCACACATGAGTCTCCCAGCTCCGTGTAGGAGATACATCAGAGTCTaGTGGACGGCTGGTGTAGGA +
Preference number: 4 (lower is better)
Translates to: PLRGQSPCPHMSLPAPCRRYIRV*WTAGVG
Trigger: TCCTACACCAGCCGTCCATCAGACTCTGATGTATCT...CCTACACGGAGCTGGGAGACTCATGTGTGGACATGGAGACTGACCCCTCAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622445.4
CDS-3UTR TCA 90 bp CCTCTGAGGGGTCAGTCTCCATGTCCACACATGAGTCTCCCAGCTCCGTGTAGGCTCTCCTGGGGGAAGTaGACATGGGTAACAAACAGA +
Preference number: 4 (lower is better)
Translates to: PLRGQSPCPHMSLPAPCRLSWGK*TWVTNR
Trigger: TCTGTTTGTTACCCATGTTCACTTCCCCCAGGAGAG...CCTACACGGAGCTGGGAGACTCATGTGTGGACATGGAGACTGACCCCTCAGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000622445.4
CDS-3UTR TCA 90 bp CACTCCTCAGGGTTCTGGGCCCTGGACGTTGCCATGGCCACGGAGGGTAGAGGGTTTCTTTTGAGTCAATaGCTCAGGGCACAACATCTT +
Preference number: 4 (lower is better)
Translates to: HSSGFWALDVAMATEGRGFLLSQ*LRAQHL
Trigger: AAGATGTTGTGCCCTGAGTCATTGACTCAAAAGAAA...CCCTCTACCCTCCGTGGCCATGGCAACGTCCAGGGCCCAGAACCCTGAGGAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR TCA 90 bp AGGGATGTTGGAGGCCAAGCTCATTCCTGGGGTAGGCAAAGGCTGAGGCATGGACTGGATCTCACCCACTaGGCAACATTGAGCTTCCCA +
Preference number: 4 (lower is better)
Translates to: RDVGGQAHSWGRQRLRHGLDLTH*ATLSFP
Trigger: TGGGAAGCTCAATGTTGCTCAGTGGGTGAGATCCAG...TCCATGCCTCAGCCTTTGCCTACCCCAGGAATGAGCTTGGCCTCCAACATCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR GCA 90 bp GAGAAAGGGGACACTTCAGAAAGGTGGGTATCCCCCATCCATCCACAACAGGCATCCTCTTGCTGTATTTaGCCTGCGGGCTGGGGTCGA +
Preference number: 4 (lower is better)
Translates to: EKGDTSERWVSPIHPQQASSCCI*PAGWGR
Trigger: TCGACCCCAGCCCGCAGGGCAAATACAGCAAGAGGA...TGCCTGTTGTGGATGGATGGGGGATACCCACCTTTCTGAAGTGTCCCCTTTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR GCA 90 bp CTCAGGGCACAACATCTTCAGGCACCCACCCTTTCAACTCCCCGTGCATATCAGATCGCCCTTTCCTCTTaGTGTATTTGCCCTGCGGGC +
Preference number: 4 (lower is better)
Translates to: LRAQHLQAPTLSTPRAYQIALSS*CICPAG
Trigger: GCCCGCAGGGCAAATACAGCAAGAGGAAAGGGCGAT...CTGATATGCACGGGGAGTTGAAAGGGTGGGTGCCTGAAGATGTTGTGCCCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR GCA 90 bp ATGGGAGAAAGGGGACACTTCAGAAAGGTGGGTATCCCCCATCCATCCACAACACGCAGCTTCTGTTCCTaGAGCAGGCGAAGGCTGTCC +
Preference number: 4 (lower is better)
Translates to: MGERGHFRKVGIPHPSTTRSFCS*SRRRLS
Trigger: GGACAGCCTTCGCCTGCTGCAGGAACAGAAGCTGCG...TGTTGTGGATGGATGGGGGATACCCACCTTTCTGAAGTGTCCCCTTTCTCCCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR CCA 90 bp CTCAGGGCACAACATCTTCAGGCACCCACCCTTTCAACTCCCCGTGCATATCAGGACATGCTGGTCTTCTaGACCATGGAGAGGAGCCTC +
Preference number: 4 (lower is better)
Translates to: LRAQHLQAPTLSTPRAYQDMLVF*TMERSL
Trigger: GAGGCTCCTCTCCATGGTCCAGAAGACCAGCATGTC...CTGATATGCACGGGGAGTTGAAAGGGTGGGTGCCTGAAGATGTTGTGCCCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR CCA 90 bp CCCATCCATCCACAACAGGCAGGTAAAAACCGACAGCTGGGGCTTAAGGGCCTCCAAAGCTGTTGGATGTaGTATCCGAGGACGTGCTCC +
Preference number: 4 (lower is better)
Translates to: PIHPQQAGKNRQLGLKGLQSCWM*YPRTCS
Trigger: GGAGCACGTCCTCGGATACCACATCCAACAGCTTTG...GAGGCCCTTAAGCCCCAGCTGTCGGTTTTTACCTGCCTGTTGTGGATGGATGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR CCA 90 bp CCCATCCATCCACAACAGGCAGGTAAAAACCGACAGCTGGGGCTTAAGGGCCTCCACAGCAAATGCCACTaGCTTGGTCTTGGCCTTCTC +
Preference number: 4 (lower is better)
Translates to: PIHPQQAGKNRQLGLKGLHSKCH*LGLGLL
Trigger: GAGAAGGCCAAGACCAAGCCAGTGGCATTTGCTGTG...GAGGCCCTTAAGCCCCAGCTGTCGGTTTTTACCTGCCTGTTGTGGATGGATGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR CCA 90 bp ATCCACAACAGGCAGGTAAAAACCGACAGCTGGGGCTTAAGGGCCTCCCGGGAGCTCCCAGACTGGAACTaGAGTTATCGCCTGATTTGC +
Preference number: 4 (lower is better)
Translates to: IHNRQVKTDSWGLRASRELPDWN*SYRLIC
Trigger: GCAAATCAGGCGATAACTCCAGTTCCAGTCTGGGAG...CTCCCGGGAGGCCCTTAAGCCCCAGCTGTCGGTTTTTACCTGCCTGTTGTGGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR CCA 90 bp ACATTGAGCTTCCCATTGCCTTTGGCTCTACTTGTGGAGAGACAGGTAAGTGAATGGCGTGCTCCCCGGTaGCCCGTTCCAGTGGCTGGT +
Preference number: 4 (lower is better)
Translates to: TLSFPLPLALLVERQVSEWRAPR*PVPVAG
Trigger: ACCAGCCACTGGAACGGGCCACCGGGGAGCACGCCA...TTCACTTACCTGTCTCTCCACAAGTAGAGCCAAAGGCAATGGGAAGCTCAATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR CCA 90 bp TTTTCTTTTGAGTCAATGACTCAGGGCACAACATCTTCAGGCACCCACCCTTTCGGTACTCGTGCATGCTaGCGTGCTCCCCGGTGGCCC +
Preference number: 4 (lower is better)
Translates to: FSFESMTQGTTSSGTHPFGTRAC*RAPRWP
Trigger: GGGCCACCGGGGAGCACGCCAGCATGCACGAGTACC...GAAAGGGTGGGTGCCTGAAGATGTTGTGCCCTGAGTCATTGACTCAAAAGAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR CCA 90 bp AGGCCTCTCCTGGGGGAAGTGAACATGGGTAACAAACAGAATCACGAGAGGCAAGGAGACAGCGCCCCCTaGAGGCGAATACATGTCAGG +
Preference number: 4 (lower is better)
Translates to: RPLLGEVNMGNKQNHERQGDSAP*RRIHVR
Trigger: CCTGACATGTATTCGCCTCCAGGGGGCGCTGTCTCC...TTGCCTCTCGTGATTCTGTTTGTTACCCATGTTCACTTCCCCCAGGAGAGGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR CCA 90 bp ATGGGAGAAAGGGGACACTTCAGAAAGGTGGGTATCCCCCATCCATCCACAACACTTGGATCTGGGGTCTaGGGAAGAGAGCCCCCATGG +
Preference number: 4 (lower is better)
Translates to: MGERGHFRKVGIPHPSTTLGSGV*GREPPW
Trigger: CCATGGGGGCTCTCTTCCCCAGACCCCAGATCCAAG...TGTTGTGGATGGATGGGGGATACCCACCTTTCTGAAGTGTCCCCTTTCTCCCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR TCA 90 bp CATATCAGCAGCTCCCAGGTGCCTACGCTGACGACTATGTGGCGAGGACAAAGAGGGGTTGTTGAGAACTaGGCGCTTAGCCAGGGAAAT +
Preference number: 4 (lower is better)
Translates to: HISSSQVPTLTTMWRGQRGVVEN*ALSQGN
Trigger: ATTTCCCTGGCTAAGCGCTCAGTTCTCAACAACCCC...TCTTTGTCCTCGCCACATAGTCGTCAGCGTAGGCACCTGGGAGCTGCTGATATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR TCA 90 bp GCCACGGAGGGTAGAGGGTGCTGTATGCCTGCCAGCTTCCACCCAGAACCCTCCTTTCTTTTGAGTCAATaGCTCAGGGCACAACATCTT +
Preference number: 4 (lower is better)
Translates to: ATEGRGCCMPASFHPEPSFLLSQ*LRAQHL
Trigger: AAGATGTTGTGCCCTGAGTCATTGACTCAAAAGAAA...GGAGGGTTCTGGGTGGAAGCTGGCAGGCATACAGCACCCTCTACCCTCCGTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR TCA 90 bp CATATCAGCAGCTCCCAGGTGCCTACGCTGACGACTATGTGGCGAGGACAAAGACTGGATCTCACCCACTaGGCAACATTGAGCTTCCCA +
Preference number: 4 (lower is better)
Translates to: HISSSQVPTLTTMWRGQRLDLTH*ATLSFP
Trigger: TGGGAAGCTCAATGTTGCTCAGTGGGTGAGATCCAG...TCTTTGTCCTCGCCACATAGTCGTCAGCGTAGGCACCTGGGAGCTGCTGATATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR GCA 90 bp AGGCCTCTCCTGGGGGAAGTGAACATGGGTAACAAACAGAATCACGAGAGGCAAAGGGTGCTGTATGCCTaGCAGCTTCCACCCAGAACC +
Preference number: 4 (lower is better)
Translates to: RPLLGEVNMGNKQNHERQRVLYA*QLPPRT
Trigger: GGTTCTGGGTGGAAGCTGGCAGGCATACAGCACCCT...TTGCCTCTCGTGATTCTGTTTGTTACCCATGTTCACTTCCCCCAGGAGAGGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR CCA 90 bp AGGCCTCTCCTGGGGGAAGTGAACATGGGTAACAAACAGAATCACGAGAGGCAAGACTCCGCTGAGCCCTaGCGGACAAAGCTGTTGGAT +
Preference number: 4 (lower is better)
Translates to: RPLLGEVNMGNKQNHERQDSAEP*RTKLLD
Trigger: ATCCAACAGCTTTGTCCGCCAGGGCTCAGCGGAGTC...TTGCCTCTCGTGATTCTGTTTGTTACCCATGTTCACTTCCCCCAGGAGAGGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR CCA 90 bp GAGAAAGGGGACACTTCAGAAAGGTGGGTATCCCCCATCCATCCACAACAGGCAGCATCAAAAGTGTCTTaGCGGGACAGTGCCCGTAGC +
Preference number: 4 (lower is better)
Translates to: EKGDTSERWVSPIHPQQAASKVS*RDSARS
Trigger: GCTACGGGCACTGTCCCGCCAAGACACTTTTGATGC...TGCCTGTTGTGGATGGATGGGGGATACCCACCTTTCTGAAGTGTCCCCTTTCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR CCA 90 bp AAGACAAGCTCCCCATGGGGTGTCCATGCTATGGCTTTCACCGACCAGACGATGCTTCTAATCAGTAAGTaGAAGCTGCACCCCACCCCC +
Preference number: 4 (lower is better)
Translates to: KTSSPWGVHAMAFTDQTMLLISK*KLHPTP
Trigger: GGGGGTGGGGTGCAGCTTCCACTTACTGATTAGAAG...CATCGTCTGGTCGGTGAAAGCCATAGCATGGACACCCCATGGGGAGCTTGTCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR CCA 90 bp CATATCAGCAGCTCCCAGGTGCCTACGCTGACGACTATGTGGCGAGGACAAAGAACAAAGAAGCAGGCTTaGGAGGCAGCCACAAAGGAC +
Preference number: 4 (lower is better)
Translates to: HISSSQVPTLTTMWRGQRTKKQA*EAATKD
Trigger: GTCCTTTGTGGCTGCCTCCCAAGCCTGCTTCTTTGT...TCTTTGTCCTCGCCACATAGTCGTCAGCGTAGGCACCTGGGAGCTGCTGATATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR CCA 90 bp CTCAGGGCACAACATCTTCAGGCACCCACCCTTTCAACTCCCCGTGCATATCAGACGCTGACGACTATGTaGCGAGGACAAAGAAGCAGG +
Preference number: 4 (lower is better)
Translates to: LRAQHLQAPTLSTPRAYQTLTTM*RGQRSR
Trigger: CCTGCTTCTTTGTCCTCGCCACATAGTCGTCAGCGT...CTGATATGCACGGGGAGTTGAAAGGGTGGGTGCCTGAAGATGTTGTGCCCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR CCA 90 bp CCAAGACAAGCTCCCCATGGGGTGTCCATGCTATGGCTTTCACCGACCAGACGAAAGACATTGCACCAGTaGGTCTGGATCTCACCCACT +
Preference number: 4 (lower is better)
Translates to: PRQAPHGVSMLWLSPTRRKTLHQ*VWISPT
Trigger: AGTGGGTGAGATCCAGACCCACTGGTGCAATGTCTT...TCGTCTGGTCGGTGAAAGCCATAGCATGGACACCCCATGGGGAGCTTGTCTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR TCA 90 bp ACATTGAGCTTCCCATTGCCTTTGGCTCTACTTGTGGAGAGACAGGTAAGTGAAGGTGTAGGACTCCGCTaGGCCCTGGCGGACAAAGCT +
Preference number: 4 (lower is better)
Translates to: TLSFPLPLALLVERQVSEGVGLR*ALADKA
Trigger: AGCTTTGTCCGCCAGGGCTCAGCGGAGTCCTACACC...TTCACTTACCTGTCTCTCCACAAGTAGAGCCAAAGGCAATGGGAAGCTCAATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR TCA 90 bp CCTCCTCCATGTTCCCTGCACTCCAGTTCCGACCCCAGAGCAGGAGGGAAGACGTATTGTATTTCTCCTTaGTGTGCAGGAAGTCTTTGG +
Preference number: 4 (lower is better)
Translates to: PPPCSLHSSSDPRAGGKTYCISP*CAGSLW
Trigger: CCAAAGACTTCCTGCACATCAAGGAGAAATACAATA...CGTCTTCCCTCCTGCTCTGGGGTCGGAACTGGAGTGCAGGGAACATGGAGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344140.5
ENST00000394310.7
CDS-3UTR TCA 90 bp AGGCCTCTCCTGGGGGAAGTGAACATGGGTAACAAACAGAATCACGAGAGGCAACTGCCGTCACACGAGTaGTGGAGATCCTGCCATCAA +
Preference number: 4 (lower is better)
Translates to: RPLLGEVNMGNKQNHERQLPSHE*WRSCHQ
Trigger: TTGATGGCAGGATCTCCATCACTCGTGTGACGGCAG...TTGCCTCTCGTGATTCTGTTTGTTACCCATGTTCACTTCCCCCAGGAGAGGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR TCA 90 bp TATCAGCAGCTCCCAGGTGCCTACGCTGACGACTATGTGGCGAGGACAAAGAAGGACTTGATGAGCCTTTaGAGTACCTTGGGAGAGGTG +
Preference number: 4 (lower is better)
Translates to: YQQLPGAYADDYVARTKKDLMSL*STLGEV
Trigger: CACCTCTCCCAAGGTACTTCAAAGGCTCATCAAGTC...CTTCTTTGTCCTCGCCACATAGTCGTCAGCGTAGGCACCTGGGAGCTGCTGATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR GCA 90 bp ATGGGAGAAAGGGGACACTTCAGAAAGGTGGGTATCCCCCATCCATCCACAACATGTCCGCACAGCAAATaGCACTGGCTTGGTCTTGGC +
Preference number: 4 (lower is better)
Translates to: MGERGHFRKVGIPHPSTTCPHSK*HWLGLG
Trigger: GCCAAGACCAAGCCAGTGGCATTTGCTGTGCGGACA...TGTTGTGGATGGATGGGGGATACCCACCTTTCTGAAGTGTCCCCTTTCTCCCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR CCA 90 bp ATGGGAGAAAGGGGACACTTCAGAAAGGTGGGTATCCCCCATCCATCCACAACAGGCGGACAAAGCTGTTaGATGTGGTATCCGAGGACG +
Preference number: 4 (lower is better)
Translates to: MGERGHFRKVGIPHPSTTGGQSC*MWYPRT
Trigger: CGTCCTCGGATACCACATCCAACAGCTTTGTCCGCC...TGTTGTGGATGGATGGGGGATACCCACCTTTCTGAAGTGTCCCCTTTCTCCCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR CCA 90 bp ACTTCAGAAAGGTGGGTATCCCCCATCCATCCACAACAGGCAGGTAAAAACCGACCACTGGCTTGGTCTTaGCCTTCTCGAGCTGCGCTA +
Preference number: 4 (lower is better)
Translates to: TSERWVSPIHPQQAGKNRPLAWS*PSRAAL
Trigger: TAGCGCAGCTCGAGAAGGCCAAGACCAAGCCAGTGG...TCGGTTTTTACCTGCCTGTTGTGGATGGATGGGGGATACCCACCTTTCTGAAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR CCA 90 bp ACATTGAGCTTCCCATTGCCTTTGGCTCTACTTGTGGAGAGACAGGTAAGTGAAGAGCCGAGGCGGTTCTaGCGCAGCTTCTGTTCCTGC +
Preference number: 4 (lower is better)
Translates to: TLSFPLPLALLVERQVSEEPRRF*RSFCSC
Trigger: GCAGGAACAGAAGCTGCGCCAGAACCGCCTCGGCTC...TTCACTTACCTGTCTCTCCACAAGTAGAGCCAAAGGCAATGGGAAGCTCAATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR CCA 90 bp ACTTCAGAAAGGTGGGTATCCCCCATCCATCCACAACAGGCAGGTAAAAACCGATATCGCCTGATTTGCTaGAGCCGAGGCGGTTCTGGC +
Preference number: 4 (lower is better)
Translates to: TSERWVSPIHPQQAGKNRYRLIC*SRGGSG
Trigger: GCCAGAACCGCCTCGGCTCCAGCAAATCAGGCGATA...TCGGTTTTTACCTGCCTGTTGTGGATGGATGGGGGATACCCACCTTTCTGAAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR CCA 90 bp CATATCAGCAGCTCCCAGGTGCCTACGCTGACGACTATGTGGCGAGGACAAAGAGAGAGCCCCTTAAGATaGGAGAAAGGGGACACTTCA +
Preference number: 4 (lower is better)
Translates to: HISSSQVPTLTTMWRGQRESPLR*EKGDTS
Trigger: TGAAGTGTCCCCTTTCTCCCATCTTAAGGGGCTCTC...TCTTTGTCCTCGCCACATAGTCGTCAGCGTAGGCACCTGGGAGCTGCTGATATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR CCA 90 bp ACATTGAGCTTCCCATTGCCTTTGGCTCTACTTGTGGAGAGACAGGTAAGTGAAGAGGGGCAGGGTTGCTaGGCTACAGGGATGCCAAGG +
Preference number: 4 (lower is better)
Translates to: TLSFPLPLALLVERQVSEEGQGC*ATGMPR
Trigger: CCTTGGCATCCCTGTAGCCCAGCAACCCTGCCCCTC...TTCACTTACCTGTCTCTCCACAAGTAGAGCCAAAGGCAATGGGAAGCTCAATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR CCA 90 bp GAGAAAGGGGACACTTCAGAAAGGTGGGTATCCCCCATCCATCCACAACAGGCATTGCACCAGTGGGTCTaGATCTCACCCACTGAGCAA +
Preference number: 4 (lower is better)
Translates to: EKGDTSERWVSPIHPQQALHQWV*ISPTEQ
Trigger: TTGCTCAGTGGGTGAGATCCAGACCCACTGGTGCAA...TGCCTGTTGTGGATGGATGGGGGATACCCACCTTTCTGAAGTGTCCCCTTTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR CCA 90 bp TATCAGCAGCTCCCAGGTGCCTACGCTGACGACTATGTGGCGAGGACAAAGAAGAAGACATTGCACCAGTaGGTCTGGATCTCACCCACT +
Preference number: 4 (lower is better)
Translates to: YQQLPGAYADDYVARTKKKTLHQ*VWISPT
Trigger: AGTGGGTGAGATCCAGACCCACTGGTGCAATGTCTT...CTTCTTTGTCCTCGCCACATAGTCGTCAGCGTAGGCACCTGGGAGCTGCTGATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR TCA 90 bp AACCGACAGCTGGGGCTTAAGGGCCTCCCGGGAGCTGGGATGGTAACACCAAAGTATTGTATTTCTCCTTaGTGTGCAGGAAGTCTTTGG +
Preference number: 4 (lower is better)
Translates to: NRQLGLKGLPGAGMVTPKYCISP*CAGSLW
Trigger: CCAAAGACTTCCTGCACATCAAGGAGAAATACAATA...CTTTGGTGTTACCATCCCAGCTCCCGGGAGGCCCTTAAGCCCCAGCTGTCGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR GCA 90 bp TTTTCTTTTGAGTCAATGACTCAGGGCACAACATCTTCAGGCACCCACCCTTTCCGCAGCTTCTGTTCCTaGAGCAGGCGAAGGCTGTCC +
Preference number: 4 (lower is better)
Translates to: FSFESMTQGTTSSGTHPFRSFCS*SRRRLS
Trigger: GGACAGCCTTCGCCTGCTGCAGGAACAGAAGCTGCG...GAAAGGGTGGGTGCCTGAAGATGTTGTGCCCTGAGTCATTGACTCAAAAGAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR GCA 90 bp ACTTCAGAAAGGTGGGTATCCCCCATCCATCCACAACAGGCAGGTAAAAACCGACCCATGGGGTGTCCATaGTATGGCTTTCACCGACCA +
Preference number: 4 (lower is better)
Translates to: TSERWVSPIHPQQAGKNRPMGCP*YGFHRP
Trigger: TGGTCGGTGAAAGCCATAGCATGGACACCCCATGGG...TCGGTTTTTACCTGCCTGTTGTGGATGGATGGGGGATACCCACCTTTCTGAAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR CCA 90 bp ATGGGAGAAAGGGGACACTTCAGAAAGGTGGGTATCCCCCATCCATCCACAACAAAGACAAGCTCCCCATaGGGTGTCCATGCTATGGCT +
Preference number: 4 (lower is better)
Translates to: MGERGHFRKVGIPHPSTTKTSSP*GVHAMA
Trigger: AGCCATAGCATGGACACCCCATGGGGAGCTTGTCTT...TGTTGTGGATGGATGGGGGATACCCACCTTTCTGAAGTGTCCCCTTTCTCCCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR CCA 90 bp ACATTGAGCTTCCCATTGCCTTTGGCTCTACTTGTGGAGAGACAGGTAAGTGAACACTCCTCAGGGTTCTaGGCCCTGGACGTTGCCATG +
Preference number: 4 (lower is better)
Translates to: TLSFPLPLALLVERQVSEHSSGF*ALDVAM
Trigger: CATGGCAACGTCCAGGGCCCAGAACCCTGAGGAGTG...TTCACTTACCTGTCTCTCCACAAGTAGAGCCAAAGGCAATGGGAAGCTCAATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR CCA 90 bp ATGGGAGAAAGGGGACACTTCAGAAAGGTGGGTATCCCCCATCCATCCACAACATGCCCAAGCAGCTCCTaGCTTGGGCACAATACATCA +
Preference number: 4 (lower is better)
Translates to: MGERGHFRKVGIPHPSTTCPSSS*LGHNTS
Trigger: TGATGTATTGTGCCCAAGCCAGGAGCTGCTTGGGCA...TGTTGTGGATGGATGGGGGATACCCACCTTTCTGAAGTGTCCCCTTTCTCCCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR TCA 90 bp AGGATCATCTTTTCTTTTGAGTCAATGACTCAGGGCACAACATCTTCAGGCACCCTTTGGGCTCGAAGGTaGTGGCCACTCCCTGCACAG +
Preference number: 4 (lower is better)
Translates to: RIIFSFESMTQGTTSSGTLWARR*WPLPAQ
Trigger: CTGTGCAGGGAGTGGCCATCACCTTCGAGCCCAAAG...GGTGCCTGAAGATGTTGTGCCCTGAGTCATTGACTCAAAAGAAAAGATGATCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR TCA 90 bp AGGCCTCTCCTGGGGGAAGTGAACATGGGTAACAAACAGAATCACGAGAGGCAACTCTCCTGGGGGAAGTaGACATGGGTAACAAACAGA +
Preference number: 4 (lower is better)
Translates to: RPLLGEVNMGNKQNHERQLSWGK*TWVTNR
Trigger: TCTGTTTGTTACCCATGTTCACTTCCCCCAGGAGAG...TTGCCTCTCGTGATTCTGTTTGTTACCCATGTTCACTTCCCCCAGGAGAGGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR GCA 90 bp CCAAGACAAGCTCCCCATGGGGTGTCCATGCTATGGCTTTCACCGACCAGACGAAAAGAGTTAAGGAAGTaGACCTTTTCTCTAGGAGGG +
Preference number: 4 (lower is better)
Translates to: PRQAPHGVSMLWLSPTRRKELRK*TFSLGG
Trigger: CCCTCCTAGAGAAAAGGTGCACTTCCTTAACTCTTT...TCGTCTGGTCGGTGAAAGCCATAGCATGGACACCCCATGGGGAGCTTGTCTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR CCA 90 bp AGGATCATCTTTTCTTTTGAGTCAATGACTCAGGGCACAACATCTTCAGGCACCGGCCCCGGGACATGCTaGTCTTCTGGACCATGGAGA +
Preference number: 4 (lower is better)
Translates to: RIIFSFESMTQGTTSSGTGPGTC*SSGPWR
Trigger: TCTCCATGGTCCAGAAGACCAGCATGTCCCGGGGCC...GGTGCCTGAAGATGTTGTGCCCTGAGTCATTGACTCAAAAGAAAAGATGATCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR CCA 90 bp ACTTCAGAAAGGTGGGTATCCCCCATCCATCCACAACAGGCAGGTAAAAACCGACAAATGCCACTGGCTTaGTCTTGGCCTTCTCGAGCT +
Preference number: 4 (lower is better)
Translates to: TSERWVSPIHPQQAGKNRQMPLA*SWPSRA
Trigger: AGCTCGAGAAGGCCAAGACCAAGCCAGTGGCATTTG...TCGGTTTTTACCTGCCTGTTGTGGATGGATGGGGGATACCCACCTTTCTGAAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR CCA 90 bp AGGCCTCTCCTGGGGGAAGTGAACATGGGTAACAAACAGAATCACGAGAGGCAATCCGAGGCCGCTATTTaGACATTGAGGTGTTTGGAC +
Preference number: 4 (lower is better)
Translates to: RPLLGEVNMGNKQNHERQSEAAI*TLRCLD
Trigger: GTCCAAACACCTCAATGTCCAAATAGCGGCCTCGGA...TTGCCTCTCGTGATTCTGTTTGTTACCCATGTTCACTTCCCCCAGGAGAGGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR CCA 90 bp ACATTGAGCTTCCCATTGCCTTTGGCTCTACTTGTGGAGAGACAGGTAAGTGAAGGCCAAGCTCATTCCTaGGGTAGGCAAAGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: TLSFPLPLALLVERQVSEGQAHS*GRQRLR
Trigger: CCTCAGCCTTTGCCTACCCCAGGAATGAGCTTGGCC...TTCACTTACCTGTCTCTCCACAAGTAGAGCCAAAGGCAATGGGAAGCTCAATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR CCA 90 bp GCTCCTGGCTTGGGCACAATACATCAGAGGGCCAAAATCAAAGGATCATCTTTTCATTGGCACAGGAGGTaGCGAGACAGGCATGAGGTG +
Preference number: 4 (lower is better)
Translates to: APGLGTIHQRAKIKGSSFHWHRR*RDRHEV
Trigger: CACCTCATGCCTGTCTCGCCACCTCCTGTGCCAATG...AAAAGATGATCCTTTGATTTTGGCCCTCTGATGTATTGTGCCCAAGCCAGGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR CCA 90 bp ACTTCAGAAAGGTGGGTATCCCCCATCCATCCACAACAGGCAGGTAAAAACCGACTTCTAATCAGTAAGTaGAAGCTGCACCCCACCCCC +
Preference number: 4 (lower is better)
Translates to: TSERWVSPIHPQQAGKNRLLISK*KLHPTP
Trigger: GGGGGTGGGGTGCAGCTTCCACTTACTGATTAGAAG...TCGGTTTTTACCTGCCTGTTGTGGATGGATGGGGGATACCCACCTTTCTGAAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR TCA 90 bp GCTCCTGGCTTGGGCACAATACATCAGAGGGCCAAAATCAAAGGATCATCTTTTGGACGTGCTCCCATCTaGCCGTTTGAATCGCCCTTT +
Preference number: 4 (lower is better)
Translates to: APGLGTIHQRAKIKGSSFGRAPI*PFESPF
Trigger: AAAGGGCGATTCAAACGGTCAGATGGGAGCACGTCC...AAAAGATGATCCTTTGATTTTGGCCCTCTGATGTATTGTGCCCAAGCCAGGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR TCA 90 bp ACTTCAGAAAGGTGGGTATCCCCCATCCATCCACAACAGGCAGGTAAAAACCGAAGATACATCAGAGTCTaGTGGACGGCTGGTGTAGGA +
Preference number: 4 (lower is better)
Translates to: TSERWVSPIHPQQAGKNRRYIRV*WTAGVG
Trigger: TCCTACACCAGCCGTCCATCAGACTCTGATGTATCT...TCGGTTTTTACCTGCCTGTTGTGGATGGATGGGGGATACCCACCTTTCTGAAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR TCA 90 bp ACTTCAGAAAGGTGGGTATCCCCCATCCATCCACAACAGGCAGGTAAAAACCGAGACTTGATGAGCCTTTaGAGTACCTTGGGAGAGGTG +
Preference number: 4 (lower is better)
Translates to: TSERWVSPIHPQQAGKNRDLMSL*STLGEV
Trigger: CACCTCTCCCAAGGTACTTCAAAGGCTCATCAAGTC...TCGGTTTTTACCTGCCTGTTGTGGATGGATGGGGGATACCCACCTTTCTGAAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR TCA 90 bp TTTTCTTTTGAGTCAATGACTCAGGGCACAACATCTTCAGGCACCCACCCTTTCCTCCATGTCCACACATaGGTCTCCCAGCTCCGTGTA +
Preference number: 4 (lower is better)
Translates to: FSFESMTQGTTSSGTHPFLHVHT*VSQLRV
Trigger: TACACGGAGCTGGGAGACTCATGTGTGGACATGGAG...GAAAGGGTGGGTGCCTGAAGATGTTGTGCCCTGAGTCATTGACTCAAAAGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR GCA 90 bp TTTTCTTTTGAGTCAATGACTCAGGGCACAACATCTTCAGGCACCCACCCTTTCTGTCCGCACAGCAAATaGCACTGGCTTGGTCTTGGC +
Preference number: 4 (lower is better)
Translates to: FSFESMTQGTTSSGTHPFCPHSK*HWLGLG
Trigger: GCCAAGACCAAGCCAGTGGCATTTGCTGTGCGGACA...GAAAGGGTGGGTGCCTGAAGATGTTGTGCCCTGAGTCATTGACTCAAAAGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR CCA 90 bp AGGATCATCTTTTCTTTTGAGTCAATGACTCAGGGCACAACATCTTCAGGCACCCCACTGGCTTGGTCTTaGCCTTCTCGAGCTGCGCTA +
Preference number: 4 (lower is better)
Translates to: RIIFSFESMTQGTTSSGTPLAWS*PSRAAL
Trigger: TAGCGCAGCTCGAGAAGGCCAAGACCAAGCCAGTGG...GGTGCCTGAAGATGTTGTGCCCTGAGTCATTGACTCAAAAGAAAAGATGATCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR CCA 90 bp ACATTGAGCTTCCCATTGCCTTTGGCTCTACTTGTGGAGAGACAGGTAAGTGAAACTTCTGCTTCTGTTTaGCACTGGCAGGGGGTGTGG +
Preference number: 4 (lower is better)
Translates to: TLSFPLPLALLVERQVSETSASV*HWQGVW
Trigger: CCACACCCCCTGCCAGTGCCAAACAGAAGCAGAAGT...TTCACTTACCTGTCTCTCCACAAGTAGAGCCAAAGGCAATGGGAAGCTCAATGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394303.8
CDS-3UTR CCA 90 bp CCTTTGAAGTACCTTGGGAGAGGTGATCTTGATGTAAACAATGATGGGGGCCAGAAGCAGCTCCTGGCTTaGGCACAATACATCAGAGGG +
Preference number: 4 (lower is better)
Translates to: PLKYLGRGDLDVNNDGGQKQLLA*AQYIRG
Trigger: CCCTCTGATGTATTGTGCCCAAGCCAGGAGCTGCTT...CTGGCCCCCATCATTGTTTACATCAAGATCACCTCTCCCAAGGTACTTCAAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000622445.4
CDS-3UTR CCA 90 bp ACTTCAGAAAGGTGGGTATCCCCCATCCATCCACAACAGGCAGGTAAAAACCGAGCTTCCCATTGCCTTTaGCTCTACTTGTGGAGAGAC +
Preference number: 4 (lower is better)
Translates to: TSERWVSPIHPQQAGKNRASHCL*LYLWRD
Trigger: GTCTCTCCACAAGTAGAGCCAAAGGCAATGGGAAGC...TCGGTTTTTACCTGCCTGTTGTGGATGGATGGGGGATACCCACCTTTCTGAAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR TCA 90 bp ACATTGAGCTTCCCATTGCCTTTGGCTCTACTTGTGGAGAGACAGGTAAGTGAATCCCATCTGACCGTTTaGATCGCCCTTTCCTCTTGC +
Preference number: 4 (lower is better)
Translates to: TLSFPLPLALLVERQVSESHLTV*IALSSC
Trigger: GCAAGAGGAAAGGGCGATTCAAACGGTCAGATGGGA...TTCACTTACCTGTCTCTCCACAAGTAGAGCCAAAGGCAATGGGAAGCTCAATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR TCA 90 bp ACTTCAGAAAGGTGGGTATCCCCCATCCATCCACAACAGGCAGGTAAAAACCGAAGAAACCCCAAGCTTTaGGCAAAGGCATCTGAAAGG +
Preference number: 4 (lower is better)
Translates to: TSERWVSPIHPQQAGKNRRNPKL*AKASER
Trigger: CCTTTCAGATGCCTTTGCTCAAAGCTTGGGGTTTCT...TCGGTTTTTACCTGCCTGTTGTGGATGGATGGGGGATACCCACCTTTCTGAAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR TCA 90 bp ACATTGAGCTTCCCATTGCCTTTGGCTCTACTTGTGGAGAGACAGGTAAGTGAACCCACTGAGCAACATTaGGCTTCCCATTGCCTTTGG +
Preference number: 4 (lower is better)
Translates to: TLSFPLPLALLVERQVSEPTEQH*ASHCLW
Trigger: CCAAAGGCAATGGGAAGCTCAATGTTGCTCAGTGGG...TTCACTTACCTGTCTCTCCACAAGTAGAGCCAAAGGCAATGGGAAGCTCAATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR TCA 90 bp TTTTCTTTTGAGTCAATGACTCAGGGCACAACATCTTCAGGCACCCACCCTTTCCCCACTGAGCAACATTaGGCTTCCCATTGCCTTTGG +
Preference number: 4 (lower is better)
Translates to: FSFESMTQGTTSSGTHPFPTEQH*ASHCLW
Trigger: CCAAAGGCAATGGGAAGCTCAATGTTGCTCAGTGGG...GAAAGGGTGGGTGCCTGAAGATGTTGTGCCCTGAGTCATTGACTCAAAAGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR CCA 90 bp AGGATCATCTTTTCTTTTGAGTCAATGACTCAGGGCACAACATCTTCAGGCACCGCATCAAAAGTGTCTTaGCGGGACAGTGCCCGTAGC +
Preference number: 4 (lower is better)
Translates to: RIIFSFESMTQGTTSSGTASKVS*RDSARS
Trigger: GCTACGGGCACTGTCCCGCCAAGACACTTTTGATGC...GGTGCCTGAAGATGTTGTGCCCTGAGTCATTGACTCAAAAGAAAAGATGATCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR CCA 90 bp ACATTGAGCTTCCCATTGCCTTTGGCTCTACTTGTGGAGAGACAGGTAAGTGAATTGCACCAGTGGGTCTaGATCTCACCCACTGAGCAA +
Preference number: 4 (lower is better)
Translates to: TLSFPLPLALLVERQVSELHQWV*ISPTEQ
Trigger: TTGCTCAGTGGGTGAGATCCAGACCCACTGGTGCAA...TTCACTTACCTGTCTCTCCACAAGTAGAGCCAAAGGCAATGGGAAGCTCAATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR TCA 90 bp TTTTCTTTTGAGTCAATGACTCAGGGCACAACATCTTCAGGCACCCACCCTTTCTTGAGGTGTTTGGACTaGGACTTTCCTCGGGACTTG +
Preference number: 4 (lower is better)
Translates to: FSFESMTQGTTSSGTHPFLRCLD*DFPRDL
Trigger: CAAGTCCCGAGGAAAGTCTCAGTCCAAACACCTCAA...GAAAGGGTGGGTGCCTGAAGATGTTGTGCCCTGAGTCATTGACTCAAAAGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR GCA 90 bp ATGGGAGAAAGGGGACACTTCAGAAAGGTGGGTATCCCCCATCCATCCACAACAAAAGAGTTAAGGAAGTaGACCTTTTCTCTAGGAGGG +
Preference number: 4 (lower is better)
Translates to: MGERGHFRKVGIPHPSTTKELRK*TFSLGG
Trigger: CCCTCCTAGAGAAAAGGTGCACTTCCTTAACTCTTT...TGTTGTGGATGGATGGGGGATACCCACCTTTCTGAAGTGTCCCCTTTCTCCCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR CCA 90 bp AGGGATGTTGGAGGCCAAGCTCATTCCTGGGGTAGGCAAAGGCTGAGGCATGGACAAAGGACAGGACAGTaGTTTTATATATGGCAAAAT +
Preference number: 4 (lower is better)
Translates to: RDVGGQAHSWGRQRLRHGQRTGQ*FYIWQN
Trigger: ATTTTGCCATATATAAAACCACTGTCCTGTCCTTTG...TCCATGCCTCAGCCTTTGCCTACCCCAGGAATGAGCTTGGCCTCCAACATCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR CCA 90 bp AAGACAAGCTCCCCATGGGGTGTCCATGCTATGGCTTTCACCGACCAGACGATGCAAAGGACAGGACAGTaGTTTTATATATGGCAAAAT +
Preference number: 4 (lower is better)
Translates to: KTSSPWGVHAMAFTDQTMQRTGQ*FYIWQN
Trigger: ATTTTGCCATATATAAAACCACTGTCCTGTCCTTTG...CATCGTCTGGTCGGTGAAAGCCATAGCATGGACACCCCATGGGGAGCTTGTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS CCA 90 bp CCGGCTGGGCGCCTCCATCCCGGCACCCTCAGTGCCTGGCCCTGCTaGCCTAGGGGGTGGCCCAAACTGCCCGTTCCCTTGGGGGCTCGG +
Preference number: 5 (lower is better)
Translates to: PAGRLHPGTLSAWPC*PRGWPKLPVPLGAR
Trigger: CCGAGCCCCCAAGGGAACGGGCAGTTTGGGCCACCCCCTAGGCCAGCAGGGCCAGGCACTGAGGGTGCCGGGATGGAGGCGCCCAGCCGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000539338.6
CDS GCA 90 bp GGTCCGGCTGGGCGCCTCCATCCCGGCACCCTCAGTGCCTGGCCCTaGTGGCCTAGGGGGTGGCCCAAACTGCCCGTTCCCTTGGGGGCT +
Preference number: 5 (lower is better)
Translates to: GPAGRLHPGTLSAWP*WPRGWPKLPVPLGA
Trigger: AGCCCCCAAGGGAACGGGCAGTTTGGGCCACCCCCTAGGCCAGCAGGGCCAGGCACTGAGGGTGCCGGGATGGAGGCGCCCAGCCGGACC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000539338.6
CDS CCA 90 bp CACCACGGTCCGGCTGGGCGCCTCCATCCCGGCACCCTCAGTGCCTaGCCCTGCTGGCCTAGGGGGTGGCCCAAACTGCCCGTTCCCTTG +
Preference number: 5 (lower is better)
Translates to: HHGPAGRLHPGTLSA*PCWPRGWPKLPVPL
Trigger: CAAGGGAACGGGCAGTTTGGGCCACCCCCTAGGCCAGCAGGGCCAGGCACTGAGGGTGCCGGGATGGAGGCGCCCAGCCGGACCGTGGTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539338.6
CDS CCA 90 bp AGGGAAGACGGGCAGGGCGCCCACTACATGGCATGTTCCTGCTCCTaGGGCACCACACTGCCCCGCTGTGAGGACTCCAGCCCGCCCCAG +
Preference number: 5 (lower is better)
Translates to: REDGQGAHYMACSCS*GTTLPRCEDSSPPQ
Trigger: CTGGGGCGGGCTGGAGTCCTCACAGCGGGGCAGTGTGGTGCCCCAGGAGCAGGAACATGCCATGTAGTGGGCGCCCTGCCCGTCTTCCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344140.5
ENST00000394310.7
CDS-3UTR CAA 90 bp ACAGGAGGTGGCGAGACAGGCATGAGGTGCCCATCCCTGAGGCGGGCAGCCGGGGGCAGGCCCCAGTCCTaGTTGGCACACTCGGCTCTC +
Preference number: 5 (lower is better)
Translates to: TGGGETGMRCPSLRRAAGGRPQS*LAHSAL
Trigger: GAGAGCCGAGTGTGCCAACAAGGACTGGGGCCTGCC...CCCGGCTGCCCGCCTCAGGGATGGGCACCTCATGCCTGTCTCGCCACCTCCTGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS GCA 90 bp AGCAGGAGGGAAGACGGGCAGGGCGCCCACTACATGGCATGTTCCTaGTCCTGGGGCACCACACTGCCCCGCTGTGAGGACTCCAGCCCG +
Preference number: 5 (lower is better)
Translates to: SRREDGQGAHYMACS*SWGTTLPRCEDSSP
Trigger: CGGGCTGGAGTCCTCACAGCGGGGCAGTGTGGTGCCCCAGGAGCAGGAACATGCCATGTAGTGGGCGCCCTGCCCGTCTTCCCTCCTGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344140.5
ENST00000394310.7
CDS-3UTR CAA 90 bp TGCCCATCCCTGAGGCGGGCAGCCGGGCAGGCCCCAGTCCTTGTTGGCACACTCGTGGAGGGTGGGACATaGGCACAGGAGGTGGCGAGA +
Preference number: 5 (lower is better)
Translates to: CPSLRRAAGQAPVLVGTLVEGGT*AQEVAR
Trigger: TCTCGCCACCTCCTGTGCCAATGTCCCACCCTCCAC...GAGTGTGCCAACAAGGACTGGGGCCTGCCCGGCTGCCCGCCTCAGGGATGGGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS GCA 90 bp AGGGCGCCCACTACATGGCATGTTCCTGCTCCTGGGGCACCACACTaGCCCGCTGTGAGGACTCCAGCCCGCCCCAGAAGCCGAGGTTTC +
Preference number: 5 (lower is better)
Translates to: RAPTTWHVPAPGAPH*PAVRTPARPRSRGF
Trigger: GAAACCTCGGCTTCTGGGGCGGGCTGGAGTCCTCACAGCGGGGCAGTGTGGTGCCCCAGGAGCAGGAACATGCCATGTAGTGGGCGCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344140.5
ENST00000394310.7
CDS-3UTR CAA 90 bp ACAGGAGGTGGCGAGACAGGCATGAGGTGCCCATCCCTGAGGCGGGCAGCCGGGTTCCTCTTGCTGTATTaGCCCTGCGGGCTGGGGTCG +
Preference number: 5 (lower is better)
Translates to: TGGGETGMRCPSLRRAAGFLLLY*PCGLGS
Trigger: CGACCCCAGCCCGCAGGGCAAATACAGCAAGAGGAA...CCCGGCTGCCCGCCTCAGGGATGGGCACCTCATGCCTGTCTCGCCACCTCCTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS CCA 90 bp CCCAAACCCCTGCATGGCGATGGCTCTTACCACTGGCAGGGGGTGTaGGGCGGCGGGTGCCAGTCACCACATCTCCCAGACTGGAACTGG +
Preference number: 5 (lower is better)
Translates to: PKPLHGDGSYHWQGV*GGGCQSPHLPDWNW
Trigger: CCAGTTCCAGTCTGGGAGATGTGGTGACTGGCACCCGCCGCCCCACACCCCCTGCCAGTGGTAAGAGCCATCGCCATGCAGGGGTTTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536613.6
CDS-3UTR CAA 90 bp TGCCCATCCCTGAGGCGGGCAGCCGGGCAGGCCCCAGTCCTTGTTGGCACACTCGCAAATGCCACTGGCTaGGTCTTGGCCTTCTCGAGC +
Preference number: 5 (lower is better)
Translates to: CPSLRRAAGQAPVLVGTLANATG*VLAFSS
Trigger: GCTCGAGAAGGCCAAGACCAAGCCAGTGGCATTTGC...GAGTGTGCCAACAAGGACTGGGGCCTGCCCGGCTGCCCGCCTCAGGGATGGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR CAA 90 bp CCTCCTCCATGTTCCCTGCACTCCAGTTCCGACCCCAGAGCAGGAGGGAAGACGCGGTTCAGCAGCGGATaGGGTGGCGTGCTGCTGGGC +
Preference number: 5 (lower is better)
Translates to: PPPCSLHSSSDPRAGGKTRFSSG*GGVLLG
Trigger: GCCCAGCAGCACGCCACCCAATCCGCTGCTGAACCG...CGTCTTCCCTCCTGCTCTGGGGTCGGAACTGGAGTGCAGGGAACATGGAGGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344140.5
ENST00000394310.7
CDS-3UTR CAA 90 bp GCCACGGAGGGTAGAGGGTGCTGTATGCCTGCCAGCTTCCACCCAGAACCCTCCCGGCCCCGGTTCCGGTaGTCGGTCAGCTCTTCCTCA +
Preference number: 5 (lower is better)
Translates to: ATEGRGCCMPASFHPEPSRPRFR*SVSSSS
Trigger: TGAGGAAGAGCTGACCGACAACCGGAACCGGGGCCG...GGAGGGTTCTGGGTGGAAGCTGGCAGGCATACAGCACCCTCTACCCTCCGTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR CAA 90 bp CGCAGTAGCGGGCCTTATTCCGGCCCCGGTTCCGGTTGTCGGTCAGCTCTTCCTCGGCCCCGGTTCCGGTaGTCGGTCAGCTCTTCCTCA +
Preference number: 5 (lower is better)
Translates to: RSSGPYSGPGSGCRSALPRPRFR*SVSSSS
Trigger: TGAGGAAGAGCTGACCGACAACCGGAACCGGGGCCG...AGGAAGAGCTGACCGACAACCGGAACCGGGGCCGGAATAAGGCCCGCTACTGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622445.4
CDS-3UTR CAA 90 bp AGCCATGGTGCGGTTCAGCAGCGGATTGGGTGGCGTGCTGCTGGGCGGGTGTGTGTGGAGGGTGGGACATaGGCACAGGAGGTGGCGAGA +
Preference number: 5 (lower is better)
Translates to: SHGAVQQRIGWRAAGRVCVEGGT*AQEVAR
Trigger: TCTCGCCACCTCCTGTGCCAATGTCCCACCCTCCAC...ACACACCCGCCCAGCAGCACGCCACCCAATCCGCTGCTGAACCGCACCATGGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622445.4
CDS GCA 90 bp GCACCCTCAGTGCCTGGCCCTGCTGGCCTAGGGGGTGGCCCAAACTaGCCGTTCCCTTGGGGGCTCGGGTTACAAGCAGAGTTGCTACAT +
Preference number: 5 (lower is better)
Translates to: APSVPGPAGLGGGPN*PFPWGLGLQAELLH
Trigger: ATGTAGCAACTCTGCTTGTAACCCGAGCCCCCAAGGGAACGGGCAGTTTGGGCCACCCCCTAGGCCAGCAGGGCCAGGCACTGAGGGTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000539338.6
CDS CCA 90 bp TCCTCTTGCTGTATTTGCCCTGCGGGCTGGGGTCGAAGACCTCCATaGGGATCTCCTGGGAGGGTGGGTAAGGGCCCCGGGACATGCTGG +
Preference number: 5 (lower is better)
Translates to: SSCCICPAGWGRRPP*GSPGRVGKGPGTCW
Trigger: CCAGCATGTCCCGGGGCCCTTACCCACCCTCCCAGGAGATCCCCATGGAGGTCTTCGACCCCAGCCCGCAGGGCAAATACAGCAAGAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344140.5
ENST00000394303.8
ENST00000394310.7
ENST00000622445.4
CDS-3UTR CAA 90 bp GAGGGGCAGGGTTGCTGGGCTACAGGGATGCCAAGGCAAAGGGATGCCCCAGGGTTCCTCTTGCTGTATTaGCCCTGCGGGCTGGGGTCG +
Preference number: 5 (lower is better)
Translates to: EGQGCWATGMPRQRDAPGFLLLY*PCGLGS
Trigger: CGACCCCAGCCCGCAGGGCAAATACAGCAAGAGGAA...CCCTGGGGCATCCCTTTGCCTTGGCATCCCTGTAGCCCAGCAACCCTGCCCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR CAA 90 bp TGCCCATCCCTGAGGCGGGCAGCCGGGCAGGCCCCAGTCCTTGTTGGCACACTCTGGCGGACAAAGCTGTaGGATGTGGTATCCGAGGAC +
Preference number: 5 (lower is better)
Translates to: CPSLRRAAGQAPVLVGTLWRTKL*DVVSED
Trigger: GTCCTCGGATACCACATCCAACAGCTTTGTCCGCCA...GAGTGTGCCAACAAGGACTGGGGCCTGCCCGGCTGCCCGCCTCAGGGATGGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR CAA 90 bp TGCCCATCCCTGAGGCGGGCAGCCGGGCAGGCCCCAGTCCTTGTTGGCACACTCTCCAGCTCATTCTTGTaGCGCCCCAAAACTGGACCC +
Preference number: 5 (lower is better)
Translates to: CPSLRRAAGQAPVLVGTLSSSFL*RPKTGP
Trigger: GGGTCCAGTTTTGGGGCGCAACAAGAATGAGCTGGA...GAGTGTGCCAACAAGGACTGGGGCCTGCCCGGCTGCCCGCCTCAGGGATGGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS TCA 90 bp GTCCAGTGGCATCCATTCCAGGGACTGCAGCCACCAGCTTCGGCCTaGGCTCTCTGCACTATCAGCCGTGGACGGCCTGCTCCGCAGGAT +
Preference number: 5 (lower is better)
Translates to: VQWHPFQGLQPPASA*ALCTISRGRPAPQD
Trigger: ATCCTGCGGAGCAGGCCGTCCACGGCTGATAGTGCAGAGAGCTCAGGCCGAAGCTGGTGGCTGCAGTCCCTGGAATGGATGCCACTGGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539338.6
ENST00000582414.1
CDS CCA 90 bp CCTGGCCCTGCTGGCCTAGGGGGTGGCCCAAACTGCCCGTTCCCTTaGGGGCTCGGGTTACAAGCAGAGTTGCTACATGTGCAGACTGCT +
Preference number: 5 (lower is better)
Translates to: PGPAGLGGGPNCPFP*GLGLQAELLHVQTA
Trigger: AGCAGTCTGCACATGTAGCAACTCTGCTTGTAACCCGAGCCCCCAAGGGAACGGGCAGTTTGGGCCACCCCCTAGGCCAGCAGGGCCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539338.6
CDS CCA 90 bp ACTGCAGCCACCAGCTTCGGCCTGAGCTCTCTGCACTATCAGCCGTaGACGGCCTGCTCCGCAGGATGGGGCCACCACAGATTTTGCCAG +
Preference number: 5 (lower is better)
Translates to: TAATSFGLSSLHYQP*TACSAGWGHHRFCQ
Trigger: CTGGCAAAATCTGTGGTGGCCCCATCCTGCGGAGCAGGCCGTCCACGGCTGATAGTGCAGAGAGCTCAGGCCGAAGCTGGTGGCTGCAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000539338.6
ENST00000582414.1
CDS CCA 90 bp GACAGCAGCAAGCAGGAGATGAAGGCAGGCCCAAGGACAGCTGCTTaGGGCCCAGGGAGGGGTGGGAACCTGATAGGGGCACAAGGCAAG +
Preference number: 5 (lower is better)
Translates to: DSSKQEMKAGPRTAA*GPGRGGNLIGAQGK
Trigger: CTTGCCTTGTGCCCCTATCAGGTTCCCACCCCTCCCTGGGCCCCAAGCAGCTGTCCTTGGGCCTGCCTTCATCTCCTGCTTGCTGCTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000539338.6
ENST00000582414.1
CDS CCA 90 bp CTGAGCTCTCTGCACTATCAGCCGTGGACGGCCTGCTCCGCAGGATaGGGCCACCACAGATTTTGCCAGCTTCACCACCACGGTCCGGCT +
Preference number: 5 (lower is better)
Translates to: LSSLHYQPWTACSAG*GHHRFCQLHHHGPA
Trigger: AGCCGGACCGTGGTGGTGAAGCTGGCAAAATCTGTGGTGGCCCCATCCTGCGGAGCAGGCCGTCCACGGCTGATAGTGCAGAGAGCTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582414.1
CDS-3UTR CAA 90 bp CCTCCTCCATGTTCCCTGCACTCCAGTTCCGACCCCAGAGCAGGAGGGAAGACGGCCACTGGCTTGGTCTaGGCCTTCTCGAGCTGCGCT +
Preference number: 5 (lower is better)
Translates to: PPPCSLHSSSDPRAGGKTATGLV*AFSSCA
Trigger: AGCGCAGCTCGAGAAGGCCAAGACCAAGCCAGTGGC...CGTCTTCCCTCCTGCTCTGGGGTCGGAACTGGAGTGCAGGGAACATGGAGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344140.5
ENST00000394310.7
CDS-3UTR CAA 90 bp GCCACGGAGGGTAGAGGGTGCTGTATGCCTGCCAGCTTCCACCCAGAACCCTCCAGGCCCCAGTCCTTGTaGGCACACTCGGCTCTCTCT +
Preference number: 5 (lower is better)
Translates to: ATEGRGCCMPASFHPEPSRPQSL*AHSALS
Trigger: AGAGAGAGCCGAGTGTGCCAACAAGGACTGGGGCCT...GGAGGGTTCTGGGTGGAAGCTGGCAGGCATACAGCACCCTCTACCCTCCGTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR CAA 90 bp GGGTCTGGGGAAGAGAGCCCCCATGGGAAAGAATCTGTGGCCTCCCTTTCCAGGGGCAGGCCCCAGTCCTaGTTGGCACACTCGGCTCTC +
Preference number: 5 (lower is better)
Translates to: GSGEESPHGKESVASLSRGRPQS*LAHSAL
Trigger: GAGAGCCGAGTGTGCCAACAAGGACTGGGGCCTGCC...CCTGGAAAGGGAGGCCACAGATTCTTTCCCATGGGGGCTCTCTTCCCCAGACCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS GCA 90 bp ACCAGCTTCGGCCTGAGCTCTCTGCACTATCAGCCGTGGACGGCCTaGTCCGCAGGATGGGGCCACCACAGATTTTGCCAGCTTCACCAC +
Preference number: 5 (lower is better)
Translates to: TSFGLSSLHYQPWTA*SAGWGHHRFCQLHH
Trigger: GTGGTGAAGCTGGCAAAATCTGTGGTGGCCCCATCCTGCGGAGCAGGCCGTCCACGGCTGATAGTGCAGAGAGCTCAGGCCGAAGCTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582414.1
CDS CCA 90 bp CATGCTCTGTCGACTTCTGCTTCTGTTTGGCACTGGCAGGGGGTGTaGGGCGGCGGGTGCCAGTCACCACATCTCCCAGACTGGAACTGG +
Preference number: 5 (lower is better)
Translates to: HALSTSASVWHWQGV*GGGCQSPHLPDWNW
Trigger: CCAGTTCCAGTCTGGGAGATGTGGTGACTGGCACCCGCCGCCCCACACCCCCTGCCAGTGCCAAACAGAAGCAGAAGTCGACAGAGCATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394303.8
ENST00000394310.7
ENST00000539338.6
CDS-3UTR CAA 90 bp CCTCCTCCATGTTCCCTGCACTCCAGTTCCGACCCCAGAGCAGGAGGGAAGACGTTCCTCTTGCTGTATTaGCCCTGCGGGCTGGGGTCG +
Preference number: 5 (lower is better)
Translates to: PPPCSLHSSSDPRAGGKTFLLLY*PCGLGS
Trigger: CGACCCCAGCCCGCAGGGCAAATACAGCAAGAGGAA...CGTCTTCCCTCCTGCTCTGGGGTCGGAACTGGAGTGCAGGGAACATGGAGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344140.5
ENST00000394310.7
CDS GCA 90 bp CCTGATTTGCTGGAGCCGAGGCGGTTCTGGCGCAGCTTCTGTTCCTaGAGCAGGCGAAGGCTGTCCAGTTTGACGGGGCTGGGAATGAAG +
Preference number: 5 (lower is better)
Translates to: PDLLEPRRFWRSFCS*SRRRLSSLTGLGMK
Trigger: CTTCATTCCCAGCCCCGTCAAACTGGACAGCCTTCGCCTGCTGCAGGAACAGAAGCTGCGCCAGAACCGCCTCGGCTCCAGCAAATCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000344140.5
ENST00000394303.8
ENST00000394310.7
ENST00000492737.5
ENST00000536613.6
ENST00000539338.6
ENST00000577582.5
ENST00000582877.1
ENST00000622445.4
CDS GCA 90 bp CAGCCGTGGACGGCCTGCTCCGCAGGATGGGGCCACCACAGATTTTaGCAGCTTCTGTTCAAGGGTAGAGGGAGACAGACTCCTACCTCC +
Preference number: 5 (lower is better)
Translates to: QPWTACSAGWGHHRF*QLLFKGRGRQTPTS
Trigger: GGAGGTAGGAGTCTGTCTCCCTCTACCCTTGAACAGAAGCTGGCAAAATCTGTGGTGGCCCCATCCTGCGGAGCAGGCCGTCCACGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539338.6
CDS GCA 90 bp ACCAGCTTCGGCCTGAGCTCTCTGCACTATCAGCCGTGGACGGCCTaGTCCGCAGGATGGGGCCACCACAGATTTTGCCAGCTTCTGTTC +
Preference number: 5 (lower is better)
Translates to: TSFGLSSLHYQPWTA*SAGWGHHRFCQLLF
Trigger: GAACAGAAGCTGGCAAAATCTGTGGTGGCCCCATCCTGCGGAGCAGGCCGTCCACGGCTGATAGTGCAGAGAGCTCAGGCCGAAGCTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539338.6
CDS CCA 90 bp CCTCTTGCTGTATTTGCCGGAGAGGGCCCAGAGCACAGCCAGGAGTaGGGACCAGTGCAAGAGAGCCCCAGAAGACCCACACGGAAACCA +
Preference number: 5 (lower is better)
Translates to: PLAVFAGEGPEHSQE*GPVQESPRRPTRKP
Trigger: TGGTTTCCGTGTGGGTCTTCTGGGGCTCTCTTGCACTGGTCCCCACTCCTGGCTGTGCTCTGGGCCCTCTCCGGCAAATACAGCAAGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577926.1
CDS-3UTR CAA 90 bp CCTCCTCCATGTTCCCTGCACTCCAGTTCCGACCCCAGAGCAGGAGGGAAGACGGCAAATGCCACTGGCTaGGTCTTGGCCTTCTCGAGC +
Preference number: 5 (lower is better)
Translates to: PPPCSLHSSSDPRAGGKTANATG*VLAFSS
Trigger: GCTCGAGAAGGCCAAGACCAAGCCAGTGGCATTTGC...CGTCTTCCCTCCTGCTCTGGGGTCGGAACTGGAGTGCAGGGAACATGGAGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344140.5
ENST00000394310.7
CDS-3UTR CAA 90 bp ACAGGAGGTGGCGAGACAGGCATGAGGTGCCCATCCCTGAGGCGGGCAGCCGGGGATTGTAGCCAACATTaGTCCGCACAGCAAATGCCA +
Preference number: 5 (lower is better)
Translates to: TGGGETGMRCPSLRRAAGDCSQH*SAQQMP
Trigger: TGGCATTTGCTGTGCGGACAAATGTTGGCTACAATC...CCCGGCTGCCCGCCTCAGGGATGGGCACCTCATGCCTGTCTCGCCACCTCCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR CAA 90 bp CCTCCTCCATGTTCCCTGCACTCCAGTTCCGACCCCAGAGCAGGAGGGAAGACGCGAAGGCTGTCCAGTTaGACGGGGCTGGGAATGAAG +
Preference number: 5 (lower is better)
Translates to: PPPCSLHSSSDPRAGGKTRRLSS*TGLGMK
Trigger: CTTCATTCCCAGCCCCGTCAAACTGGACAGCCTTCG...CGTCTTCCCTCCTGCTCTGGGGTCGGAACTGGAGTGCAGGGAACATGGAGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344140.5
ENST00000394310.7
CDS-3UTR CAA 90 bp CCCCTGCCTCTCAGCGAATGTAGACGCCTCGTCCCCAGCCCTCCAGCTCATTCTCGAAGGCTGTCCAGTTaGACGGGGCTGGGAATGAAG +
Preference number: 5 (lower is better)
Translates to: PLPLSECRRLVPSPPAHSRRLSS*TGLGMK
Trigger: CTTCATTCCCAGCCCCGTCAAACTGGACAGCCTTCG...AGAATGAGCTGGAGGGCTGGGGACGAGGCGTCTACATTCGCTGAGAGGCAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000622445.4
CDS-3UTR CAA 90 bp CCTCCTCCATGTTCCCTGCACTCCAGTTCCGACCCCAGAGCAGGAGGGAAGACGGACTTCTGCTTCTGTTaGGCACTGGCAGGGGGTGTG +
Preference number: 5 (lower is better)
Translates to: PPPCSLHSSSDPRAGGKTDFCFC*ALAGGV
Trigger: CACACCCCCTGCCAGTGCCAAACAGAAGCAGAAGTC...CGTCTTCCCTCCTGCTCTGGGGTCGGAACTGGAGTGCAGGGAACATGGAGGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394310.7
CDS-3UTR CAA 90 bp CCGTTCCAGTGGCTGGTCCCCGGAAGCAAGGTAGGGTCCCTGGAGGTTGGAGACCCCTCCAGCTCATTCTaGTTGCGCCCCAAAACTGGA +
Preference number: 5 (lower is better)
Translates to: PFQWLVPGSKVGSLEVGDPSSSF*LRPKTG
Trigger: TCCAGTTTTGGGGCGCAACAAGAATGAGCTGGAGGG...GTCTCCAACCTCCAGGGACCCTACCTTGCTTCCGGGGACCAGCCACTGGAACGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000622445.4
CDS GCA 90 bp TATTTGCCGGAGAGGGCCCAGAGCACAGCCAGGAGTGGGGACCAGTaGAAGAGAGCCCCAGAAGACCCACACGGAAACCACCAAACCAAG +
Preference number: 5 (lower is better)
Translates to: YLPERAQSTARSGDQ*KRAPEDPHGNHQTK
Trigger: CTTGGTTTGGTGGTTTCCGTGTGGGTCTTCTGGGGCTCTCTTGCACTGGTCCCCACTCCTGGCTGTGCTCTGGGCCCTCTCCGGCAAATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577926.1
CDS CCA 90 bp CTGAGCTCTCTGCACTATCAGCCGTGGACGGCCTGCTCCGCAGGATaGGGCCACCACAGATTTTGCCAGCTTCTGTTCAAGGGTAGAGGG +
Preference number: 5 (lower is better)
Translates to: LSSLHYQPWTACSAG*GHHRFCQLLFKGRG
Trigger: CCCTCTACCCTTGAACAGAAGCTGGCAAAATCTGTGGTGGCCCCATCCTGCGGAGCAGGCCGTCCACGGCTGATAGTGCAGAGAGCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539338.6
CDS-3UTR CAA 90 bp CCTCCTCCATGTTCCCTGCACTCCAGTTCCGACCCCAGAGCAGGAGGGAAGACGAATCGCCCTTTCCTCTaGCTGTATTTGCCCTGCGGG +
Preference number: 5 (lower is better)
Translates to: PPPCSLHSSSDPRAGGKTNRPFL*LYLPCG
Trigger: CCCGCAGGGCAAATACAGCAAGAGGAAAGGGCGATT...CGTCTTCCCTCCTGCTCTGGGGTCGGAACTGGAGTGCAGGGAACATGGAGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344140.5
ENST00000394310.7
CDS-3UTR CAA 90 bp CCTCCTCCATGTTCCCTGCACTCCAGTTCCGACCCCAGAGCAGGAGGGAAGACGTGGCGGACAAAGCTGTaGGATGTGGTATCCGAGGAC +
Preference number: 5 (lower is better)
Translates to: PPPCSLHSSSDPRAGGKTWRTKL*DVVSED
Trigger: GTCCTCGGATACCACATCCAACAGCTTTGTCCGCCA...CGTCTTCCCTCCTGCTCTGGGGTCGGAACTGGAGTGCAGGGAACATGGAGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344140.5
ENST00000394310.7
CDS-3UTR CAA 90 bp CCTCCTCCATGTTCCCTGCACTCCAGTTCCGACCCCAGAGCAGGAGGGAAGACGATGTGCAGGAAGTCTTaGGGCTCGAAGGTGATGGCC +
Preference number: 5 (lower is better)
Translates to: PPPCSLHSSSDPRAGGKTMCRKS*GSKVMA
Trigger: GGCCATCACCTTCGAGCCCAAAGACTTCCTGCACAT...CGTCTTCCCTCCTGCTCTGGGGTCGGAACTGGAGTGCAGGGAACATGGAGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344140.5
ENST00000394310.7
CDS-3UTR CAA 90 bp GAGGGAGACAGCGCCCCCTGGAGGCGAATACATGTCAGGTGTGAGCCCCTCGCTTGTTTGCTGGGGTTGTaGAGAACTGAGCGCTTAGCC +
Preference number: 5 (lower is better)
Translates to: EGDSAPWRRIHVRCEPLACLLGL*RTERLA
Trigger: GGCTAAGCGCTCAGTTCTCAACAACCCCAGCAAACA...AGCGAGGGGCTCACACCTGACATGTATTCGCCTCCAGGGGGCGCTGTCTCCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR CAA 90 bp GAGGGGCAGGGTTGCTGGGCTACAGGGATGCCAAGGCAAAGGGATGCCCCAGGGGGACTTGATGAGCCTTaGAAGTACCTTGGGAGAGGT +
Preference number: 5 (lower is better)
Translates to: EGQGCWATGMPRQRDAPGGLDEP*KYLGRG
Trigger: ACCTCTCCCAAGGTACTTCAAAGGCTCATCAAGTCC...CCCTGGGGCATCCCTTTGCCTTGGCATCCCTGTAGCCCAGCAACCCTGCCCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR CAA 90 bp GGTCTGGGGAAGAGAGCCCCCATGGGAAAGAATCTGTGGCCTCCCTTTCCAGGACCCCAGTACTGCAGCTaGGGAGAAGGAGAGCCATCC +
Preference number: 5 (lower is better)
Translates to: GLGKRAPMGKNLWPPFPGPQYCS*GEGEPS
Trigger: GGATGGCTCTCCTTCTCCCAAGCTGCAGTACTGGGG...TCCTGGAAAGGGAGGCCACAGATTCTTTCCCATGGGGGCTCTCTTCCCCAGACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR CAA 90 bp CCTCTGAGGGGTCAGTCTCCATGTCCACACATGAGTCTCCCAGCTCCGTGTAGGAGGCCCCAGTCCTTGTaGGCACACTCGGCTCTCTCT +
Preference number: 5 (lower is better)
Translates to: PLRGQSPCPHMSLPAPCRRPQSL*AHSALS
Trigger: AGAGAGAGCCGAGTGTGCCAACAAGGACTGGGGCCT...CCTACACGGAGCTGGGAGACTCATGTGTGGACATGGAGACTGACCCCTCAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622445.4
CDS-3UTR CAA 90 bp AAACTGGACCCCCACCCTCAGCGCAGTAGCGGGCCTTATTCCGGCCCCGGTTCCAGCTTCCCATTGCCTTaGGCTCTACTTGTGGAGAGA +
Preference number: 5 (lower is better)
Translates to: KLDPHPQRSSGPYSGPGSSFPLP*ALLVER
Trigger: TCTCTCCACAAGTAGAGCCAAAGGCAATGGGAAGCT...GGAACCGGGGCCGGAATAAGGCCCGCTACTGCGCTGAGGGTGGGGGTCCAGTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000622445.4
CDS-3UTR CAA 90 bp CCTCCTCCATGTTCCCTGCACTCCAGTTCCGACCCCAGAGCAGGAGGGAAGACGCTCCCATCTGACCGTTaGAATCGCCCTTTCCTCTTG +
Preference number: 5 (lower is better)
Translates to: PPPCSLHSSSDPRAGGKTLPSDR*NRPFLL
Trigger: CAAGAGGAAAGGGCGATTCAAACGGTCAGATGGGAG...CGTCTTCCCTCCTGCTCTGGGGTCGGAACTGGAGTGCAGGGAACATGGAGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344140.5
ENST00000394310.7
CDS-3UTR CAA 90 bp GGTCTGGGGAAGAGAGCCCCCATGGGAAAGAATCTGTGGCCTCCCTTTCCAGGAGCAAATGCCACTGGCTaGGTCTTGGCCTTCTCGAGC +
Preference number: 5 (lower is better)
Translates to: GLGKRAPMGKNLWPPFPGANATG*VLAFSS
Trigger: GCTCGAGAAGGCCAAGACCAAGCCAGTGGCATTTGC...TCCTGGAAAGGGAGGCCACAGATTCTTTCCCATGGGGGCTCTCTTCCCCAGACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR CAA 90 bp CCTCCTCCATGTTCCCTGCACTCCAGTTCCGACCCCAGAGCAGGAGGGAAGACGCTGCTAACACTAGTCTaGGCAGAGCCACTCTGCTCA +
Preference number: 5 (lower is better)
Translates to: PPPCSLHSSSDPRAGGKTLLTLV*AEPLCS
Trigger: TGAGCAGAGTGGCTCTGCCAAGACTAGTGTTAGCAG...CGTCTTCCCTCCTGCTCTGGGGTCGGAACTGGAGTGCAGGGAACATGGAGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344140.5
CDS-3UTR CAA 90 bp CCTCCTCCATGTTCCCTGCACTCCAGTTCCGACCCCAGAGCAGGAGGGAAGACGTGTTTGCTGGGGTTGTaGAGAACTGAGCGCTTAGCC +
Preference number: 5 (lower is better)
Translates to: PPPCSLHSSSDPRAGGKTCLLGL*RTERLA
Trigger: GGCTAAGCGCTCAGTTCTCAACAACCCCAGCAAACA...CGTCTTCCCTCCTGCTCTGGGGTCGGAACTGGAGTGCAGGGAACATGGAGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344140.5
ENST00000394310.7
CDS-3UTR CAA 90 bp AGGTGCCCATCCCTGAGGCGGGCAGCCGGGCAGGCCCCAGTCCTTGTTGGCACATCAATGATGATGTGTTaGCTGGGGTTGTTGAGAACT +
Preference number: 5 (lower is better)
Translates to: RCPSLRRAAGQAPVLVGTSMMMC*LGLLRT
Trigger: AGTTCTCAACAACCCCAGCAAACACATCATCATTGA...TGTGCCAACAAGGACTGGGGCCTGCCCGGCTGCCCGCCTCAGGGATGGGCACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR CAA 90 bp CGGGGGTGTCGGCATCAAAAGTGTCTTGGCGGGACAGTGCCCGTAGCGTGCCTGGGACTTGATGAGCCTTaGAAGTACCTTGGGAGAGGT +
Preference number: 5 (lower is better)
Translates to: RGCRHQKCLGGTVPVACLGLDEP*KYLGRG
Trigger: ACCTCTCCCAAGGTACTTCAAAGGCTCATCAAGTCC...CAGGCACGCTACGGGCACTGTCCCGCCAAGACACTTTTGATGCCGACACCCCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000622445.4
CDS-3UTR CAA 90 bp GAGGGAGACAGCGCCCCCTGGAGGCGAATACATGTCAGGTGTGAGCCCCTCGCTTTCCGAGGCCGCTATTaGGACATTGAGGTGTTTGGA +
Preference number: 5 (lower is better)
Translates to: EGDSAPWRRIHVRCEPLAFRGRY*DIEVFG
Trigger: TCCAAACACCTCAATGTCCAAATAGCGGCCTCGGAA...AGCGAGGGGCTCACACCTGACATGTATTCGCCTCCAGGGGGCGCTGTCTCCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR CAA 90 bp AGGCCTCTCCTGGGGGAAGTGAACATGGGTAACAAACAGAATCACGAGAGGCAACGGTTCAGCAGCGGATaGGGTGGCGTGCTGCTGGGC +
Preference number: 5 (lower is better)
Translates to: RPLLGEVNMGNKQNHERQRFSSG*GGVLLG
Trigger: GCCCAGCAGCACGCCACCCAATCCGCTGCTGAACCG...TTGCCTCTCGTGATTCTGTTTGTTACCCATGTTCACTTCCCCCAGGAGAGGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR CAA 90 bp GGTCTGGGGAAGAGAGCCCCCATGGGAAAGAATCTGTGGCCTCCCTTTCCAGGAGACTTCTGCTTCTGTTaGGCACTGGCAGGGGGTGTG +
Preference number: 5 (lower is better)
Translates to: GLGKRAPMGKNLWPPFPGDFCFC*ALAGGV
Trigger: CACACCCCCTGCCAGTGCCAAACAGAAGCAGAAGTC...TCCTGGAAAGGGAGGCCACAGATTCTTTCCCATGGGGGCTCTCTTCCCCAGACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000394303.8
CDS-3UTR CAA 90 bp ATCCACAACAGGCAGGTAAAAACCGACAGCTGGGGCTTAAGGGCCTCCCGGGAGAATCGCCCTTTCCTCTaGCTGTATTTGCCCTGCGGG +
Preference number: 5 (lower is better)
Translates to: IHNRQVKTDSWGLRASRENRPFL*LYLPCG
Trigger: CCCGCAGGGCAAATACAGCAAGAGGAAAGGGCGATT...CTCCCGGGAGGCCCTTAAGCCCCAGCTGTCGGTTTTTACCTGCCTGTTGTGGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR CAA 90 bp GAGAAAGGGGACACTTCAGAAAGGTGGGTATCCCCCATCCATCCACAACAGGCAGCCACTGGCTTGGTCTaGGCCTTCTCGAGCTGCGCT +
Preference number: 5 (lower is better)
Translates to: EKGDTSERWVSPIHPQQAATGLV*AFSSCA
Trigger: AGCGCAGCTCGAGAAGGCCAAGACCAAGCCAGTGGC...TGCCTGTTGTGGATGGATGGGGGATACCCACCTTTCTGAAGTGTCCCCTTTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR CAA 90 bp CCTCTCAGCGAATGTAGACGCCTCGTCCCCAGCCCTCCAGCTCATTCTTGTTGCATGTGCAGGAAGTCTTaGGGCTCGAAGGTGATGGCC +
Preference number: 5 (lower is better)
Translates to: PLSECRRLVPSPPAHSCCMCRKS*GSKVMA
Trigger: GGCCATCACCTTCGAGCCCAAAGACTTCCTGCACAT...GCAACAAGAATGAGCTGGAGGGCTGGGGACGAGGCGTCTACATTCGCTGAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622445.4
CDS-3UTR CAA 90 bp CCTCCTCCATGTTCCCTGCACTCCAGTTCCGACCCCAGAGCAGGAGGGAAGACGGGACTTGATGAGCCTTaGAAGTACCTTGGGAGAGGT +
Preference number: 5 (lower is better)
Translates to: PPPCSLHSSSDPRAGGKTGLDEP*KYLGRG
Trigger: ACCTCTCCCAAGGTACTTCAAAGGCTCATCAAGTCC...CGTCTTCCCTCCTGCTCTGGGGTCGGAACTGGAGTGCAGGGAACATGGAGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344140.5
ENST00000394310.7
CDS-3UTR CAA 90 bp CCTCCTCCATGTTCCCTGCACTCCAGTTCCGACCCCAGAGCAGGAGGGAAGACGTTCCGAGGCCGCTATTaGGACATTGAGGTGTTTGGA +
Preference number: 5 (lower is better)
Translates to: PPPCSLHSSSDPRAGGKTFRGRY*DIEVFG
Trigger: TCCAAACACCTCAATGTCCAAATAGCGGCCTCGGAA...CGTCTTCCCTCCTGCTCTGGGGTCGGAACTGGAGTGCAGGGAACATGGAGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344140.5
ENST00000394310.7
CDS-3UTR CAA 90 bp GGTGCCTACGCTGACGACTATGTGGCGAGGACAAAGAAGCAGGCTTGGGAGGCAGACAAAGAAGCAGGCTaGGGAGGCAGCCACAAAGGA +
Preference number: 5 (lower is better)
Translates to: GAYADDYVARTKKQAWEADKEAG*GGSHKG
Trigger: TCCTTTGTGGCTGCCTCCCAAGCCTGCTTCTTTGTC...TGCCTCCCAAGCCTGCTTCTTTGTCCTCGCCACATAGTCGTCAGCGTAGGCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS TCA 90 bp AGCTGTTGGATGTGGTATCCGAGGACGTGCTCCCATCTGACCGTTTaGATCGCCCTTTCCTCTTGCTGTATTTGCCCTGCGGGCTGGGGT +
Preference number: 5 (lower is better)
Translates to: SCWMWYPRTCSHLTV*IALSSCCICPAGWG
Trigger: ACCCCAGCCCGCAGGGCAAATACAGCAAGAGGAAAGGGCGATTCAAACGGTCAGATGGGAGCACGTCCTCGGATACCACATCCAACAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344140.5
ENST00000394303.8
ENST00000394310.7
ENST00000622445.4
CDS TCA 90 bp GCGGGTCCTGGTTGGATCAGCATGGAGAGCCAGTGTCAAGACCCTTaGATGCTCCATAACTCTCAGCCCTGGGCACCTCTGCAGAAAGGA +
Preference number: 5 (lower is better)
Translates to: AGPGWISMESQCQDP*MLHNSQPWAPLQKG
Trigger: TCCTTTCTGCAGAGGTGCCCAGGGCTGAGAGTTATGGAGCATTCAAGGGTCTTGACACTGGCTCTCCATGCTGATCCAACCAGGACCCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582544.1
CDS-3UTR CAA 90 bp AGGCCTCTCCTGGGGGAAGTGAACATGGGTAACAAACAGAATCACGAGAGGCAAGCCACTGGCTTGGTCTaGGCCTTCTCGAGCTGCGCT +
Preference number: 5 (lower is better)
Translates to: RPLLGEVNMGNKQNHERQATGLV*AFSSCA
Trigger: AGCGCAGCTCGAGAAGGCCAAGACCAAGCCAGTGGC...TTGCCTCTCGTGATTCTGTTTGTTACCCATGTTCACTTCCCCCAGGAGAGGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR CAA 90 bp CCTCCTCCATGTTCCCTGCACTCCAGTTCCGACCCCAGAGCAGGAGGGAAGACGGATTGTAGCCAACATTaGTCCGCACAGCAAATGCCA +
Preference number: 5 (lower is better)
Translates to: PPPCSLHSSSDPRAGGKTDCSQH*SAQQMP
Trigger: TGGCATTTGCTGTGCGGACAAATGTTGGCTACAATC...CGTCTTCCCTCCTGCTCTGGGGTCGGAACTGGAGTGCAGGGAACATGGAGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344140.5
ENST00000394310.7
CDS-3UTR CAA 90 bp ACAGGAGGTGGCGAGACAGGCATGAGGTGCCCATCCCTGAGGCGGGCAGCCGGGTTATTGTATTTCTCCTaGATGTGCAGGAAGTCTTTG +
Preference number: 5 (lower is better)
Translates to: TGGGETGMRCPSLRRAAGLLYFS*MCRKSL
Trigger: CAAAGACTTCCTGCACATCAAGGAGAAATACAATAA...CCCGGCTGCCCGCCTCAGGGATGGGCACCTCATGCCTGTCTCGCCACCTCCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR CAA 90 bp CTCAGGGCACAACATCTTCAGGCACCCACCCTTTCAACTCCCCGTGCATATCAGCGAAGGCTGTCCAGTTaGACGGGGCTGGGAATGAAG +
Preference number: 5 (lower is better)
Translates to: LRAQHLQAPTLSTPRAYQRRLSS*TGLGMK
Trigger: CTTCATTCCCAGCCCCGTCAAACTGGACAGCCTTCG...CTGATATGCACGGGGAGTTGAAAGGGTGGGTGCCTGAAGATGTTGTGCCCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR CAA 90 bp CCTCCTCCATGTTCCCTGCACTCCAGTTCCGACCCCAGAGCAGGAGGGAAGACGATGTGTTTGCTGGGGTaGTTGAGAACTGAGCGCTTA +
Preference number: 5 (lower is better)
Translates to: PPPCSLHSSSDPRAGGKTMCLLG*LRTERL
Trigger: TAAGCGCTCAGTTCTCAACAACCCCAGCAAACACAT...CGTCTTCCCTCCTGCTCTGGGGTCGGAACTGGAGTGCAGGGAACATGGAGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344140.5
ENST00000394310.7
CDS-3UTR CAA 90 bp CCTTTGAAGTACCTTGGGAGAGGTGATCTTGATGTAAACAATGATGGGGGCCAGCGGTTCAGCAGCGGATaGGGTGGCGTGCTGCTGGGC +
Preference number: 5 (lower is better)
Translates to: PLKYLGRGDLDVNNDGGQRFSSG*GGVLLG
Trigger: GCCCAGCAGCACGCCACCCAATCCGCTGCTGAACCG...CTGGCCCCCATCATTGTTTACATCAAGATCACCTCTCCCAAGGTACTTCAAAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000622445.4
CDS-3UTR CAA 90 bp CCCATCCATCCACAACAGGCAGGTAAAAACCGACAGCTGGGGCTTAAGGGCCTCCAAGCAGCTCCTGGCTaGGGCACAATACATCAGAGG +
Preference number: 5 (lower is better)
Translates to: PIHPQQAGKNRQLGLKGLQAAPG*GTIHQR
Trigger: CCTCTGATGTATTGTGCCCAAGCCAGGAGCTGCTTG...GAGGCCCTTAAGCCCCAGCTGTCGGTTTTTACCTGCCTGTTGTGGATGGATGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR CAA 90 bp GGGTCTGGGGAAGAGAGCCCCCATGGGAAAGAATCTGTGGCCTCCCTTTCCAGGAGCTTCCCATTGCCTTaGGCTCTACTTGTGGAGAGA +
Preference number: 5 (lower is better)
Translates to: GSGEESPHGKESVASLSRSFPLP*ALLVER
Trigger: TCTCTCCACAAGTAGAGCCAAAGGCAATGGGAAGCT...CCTGGAAAGGGAGGCCACAGATTCTTTCCCATGGGGGCTCTCTTCCCCAGACCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR CAA 90 bp GCCACGGAGGGTAGAGGGTGCTGTATGCCTGCCAGCTTCCACCCAGAACCCTCCTGTGTATTTAAGACATaGCACCAGTGGGTCTGGATC +
Preference number: 5 (lower is better)
Translates to: ATEGRGCCMPASFHPEPSCVFKT*HQWVWI
Trigger: GATCCAGACCCACTGGTGCAATGTCTTAAATACACA...GGAGGGTTCTGGGTGGAAGCTGGCAGGCATACAGCACCCTCTACCCTCCGTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS TCA 90 bp GCGGACAAAGCTGTTGGATGTGGTATCCGAGGACGTGCTCCCATCTaGCCGTTTGAATCGCCCTTTCCTCTTGCTGTATTTGCCCTGCGG +
Preference number: 5 (lower is better)
Translates to: ADKAVGCGIRGRAPI*PFESPFPLAVFALR
Trigger: CCGCAGGGCAAATACAGCAAGAGGAAAGGGCGATTCAAACGGTCAGATGGGAGCACGTCCTCGGATACCACATCCAACAGCTTTGTCCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344140.5
ENST00000394303.8
ENST00000394310.7
ENST00000622445.4
CDS TCA 90 bp AGCTGTTGGATGTGGTATCCGAGGACGTGCTCCCATCTGACCGTTTaGATCGCCCTTTCCTCTTGCTGTATTTGCCGGAGAGGGCCCAGA +
Preference number: 5 (lower is better)
Translates to: SCWMWYPRTCSHLTV*IALSSCCICRRGPR
Trigger: TCTGGGCCCTCTCCGGCAAATACAGCAAGAGGAAAGGGCGATTCAAACGGTCAGATGGGAGCACGTCCTCGGATACCACATCCAACAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577926.1
CDS GCA 90 bp GTCCTGGTTGGATCAGCATGGAGAGCCAGTGTCAAGACCCTTGAATaGTCCATAACTCTCAGCCCTGGGCACCTCTGCAGAAAGGACCTC +
Preference number: 5 (lower is better)
Translates to: VLVGSAWRASVKTLE*SITLSPGHLCRKDL
Trigger: GAGGTCCTTTCTGCAGAGGTGCCCAGGGCTGAGAGTTATGGAGCATTCAAGGGTCTTGACACTGGCTCTCCATGCTGATCCAACCAGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582544.1
CDS CCA 90 bp AGGCAATGCACCCAGTCAGAGAGGCGGGTCCTGGTTGGATCAGCATaGAGAGCCAGTGTCAAGACCCTTGAATGCTCCATAACTCTCAGC +
Preference number: 5 (lower is better)
Translates to: RQCTQSERRVLVGSA*RASVKTLECSITLS
Trigger: GCTGAGAGTTATGGAGCATTCAAGGGTCTTGACACTGGCTCTCCATGCTGATCCAACCAGGACCCGCCTCTCTGACTGGGTGCATTGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582544.1
CDS-3UTR CAA 90 bp CATATCAGCAGCTCCCAGGTGCCTACGCTGACGACTATGTGGCGAGGACAAAGATGGCGGACAAAGCTGTaGGATGTGGTATCCGAGGAC +
Preference number: 5 (lower is better)
Translates to: HISSSQVPTLTTMWRGQRWRTKL*DVVSED
Trigger: GTCCTCGGATACCACATCCAACAGCTTTGTCCGCCA...TCTTTGTCCTCGCCACATAGTCGTCAGCGTAGGCACCTGGGAGCTGCTGATATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR CAA 90 bp CCCATCCATCCACAACAGGCAGGTAAAAACCGACAGCTGGGGCTTAAGGGCCTCTGTTTGCTGGGGTTGTaGAGAACTGAGCGCTTAGCC +
Preference number: 5 (lower is better)
Translates to: PIHPQQAGKNRQLGLKGLCLLGL*RTERLA
Trigger: GGCTAAGCGCTCAGTTCTCAACAACCCCAGCAAACA...GAGGCCCTTAAGCCCCAGCTGTCGGTTTTTACCTGCCTGTTGTGGATGGATGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR CAA 90 bp AAGACAAGCTCCCCATGGGGTGTCCATGCTATGGCTTTCACCGACCAGACGATGTCCAGCTCATTCTTGTaGCGCCCCAAAACTGGACCC +
Preference number: 5 (lower is better)
Translates to: KTSSPWGVHAMAFTDQTMSSSFL*RPKTGP
Trigger: GGGTCCAGTTTTGGGGCGCAACAAGAATGAGCTGGA...CATCGTCTGGTCGGTGAAAGCCATAGCATGGACACCCCATGGGGAGCTTGTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR CAA 90 bp TATCAGCAGCTCCCAGGTGCCTACGCTGACGACTATGTGGCGAGGACAAAGAAGCCCTCCAGCTCATTCTaGTTGCGCCCCAAAACTGGA +
Preference number: 5 (lower is better)
Translates to: YQQLPGAYADDYVARTKKPSSSF*LRPKTG
Trigger: TCCAGTTTTGGGGCGCAACAAGAATGAGCTGGAGGG...CTTCTTTGTCCTCGCCACATAGTCGTCAGCGTAGGCACCTGGGAGCTGCTGATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR CAA 90 bp TATCAGCAGCTCCCAGGTGCCTACGCTGACGACTATGTGGCGAGGACAAAGAAGGACAAAGAAGCAGGCTaGGGAGGCAGCCACAAAGGA +
Preference number: 5 (lower is better)
Translates to: YQQLPGAYADDYVARTKKDKEAG*GGSHKG
Trigger: TCCTTTGTGGCTGCCTCCCAAGCCTGCTTCTTTGTC...CTTCTTTGTCCTCGCCACATAGTCGTCAGCGTAGGCACCTGGGAGCTGCTGATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS TCA 90 bp GTTGGGGGACATGTGAGGGCAGGAGGCAAGAGGTGTGGATTTGTGTaGCTATGCAGGGGTGGTGTTGGACAAGGCATAGGAGGTTATGTG +
Preference number: 5 (lower is better)
Translates to: VGGHVRAGGKRCGFV*LCRGGVGQGIGGYV
Trigger: CACATAACCTCCTATGCCTTGTCCAACACCACCCCTGCATAGTCACACAAATCCACACCTCTTGCCTCCTGCCCTCACATGTCCCCCAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539338.6
CDS TCA 90 bp AGAGGCAAGTTAAGAGCAGGATATGGGACAGGGCTTTCCCTGAAATaGGGGCTGCTGGGTGCCAGACAGCTGGCTTTGACCACAATGACC +
Preference number: 5 (lower is better)
Translates to: RGKLRAGYGTGLSLK*GLLGARQLALTTMT
Trigger: GGTCATTGTGGTCAAAGCCAGCTGTCTGGCACCCAGCAGCCCTCATTTCAGGGAAAGCCCTGTCCCATATCCTGCTCTTAACTTGCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539338.6
CDS TCA 90 bp GCGGACAAAGCTGTTGGATGTGGTATCCGAGGACGTGCTCCCATCTaGCCGTTTGAATCGCCCTTTCCTCTTGCTGTATTTGCCGGAGAG +
Preference number: 5 (lower is better)
Translates to: ADKAVGCGIRGRAPI*PFESPFPLAVFAGE
Trigger: CTCTCCGGCAAATACAGCAAGAGGAAAGGGCGATTCAAACGGTCAGATGGGAGCACGTCCTCGGATACCACATCCAACAGCTTTGTCCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577926.1
CDS TCA 90 bp AGCTGTTGGATGTGGTATCCGAGGACGTGCTCCCATCTGACCGTTTaGATCGCCCTTTCCTCTTGCTGTATTTGCCCTGAAGAGGCCAGG +
Preference number: 5 (lower is better)
Translates to: SCWMWYPRTCSHLTV*IALSSCCICPEEAR
Trigger: CCTGGCCTCTTCAGGGCAAATACAGCAAGAGGAAAGGGCGATTCAAACGGTCAGATGGGAGCACGTCCTCGGATACCACATCCAACAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582877.1
CDS GCA 90 bp AGACACACATGCAGACGCACATGTGCGGGCAGACACACACACATATaGAGACACACAGGTGCACACAGACACACATGTAGGCATGCGCAC +
Preference number: 5 (lower is better)
Translates to: RHTCRRTCAGRHTHI*RHTGAHRHTCRHAH
Trigger: GTGCGCATGCCTACATGTGTGTCTGTGTGCACCTGTGTGTCTGCATATGTGTGTGTGTCTGCCCGCACATGTGCGTCTGCATGTGTGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539338.6
CDS GCA 90 bp GTCAAGACCCTTGAATGCTCCATAACTCTCAGCCCTGGGCACCTCTaGAGAAAGGACCTCAGCAGCCCTGTGTCTACCCTATGCAAAGCT +
Preference number: 5 (lower is better)
Translates to: VKTLECSITLSPGHL*RKDLSSPVSTLCKA
Trigger: AGCTTTGCATAGGGTAGACACAGGGCTGCTGAGGTCCTTTCTGCAGAGGTGCCCAGGGCTGAGAGTTATGGAGCATTCAAGGGTCTTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582544.1
CDS-3UTR CAA 90 bp CATATCAGCAGCTCCCAGGTGCCTACGCTGACGACTATGTGGCGAGGACAAAGACTCCCATCTGACCGTTaGAATCGCCCTTTCCTCTTG +
Preference number: 5 (lower is better)
Translates to: HISSSQVPTLTTMWRGQRLPSDR*NRPFLL
Trigger: CAAGAGGAAAGGGCGATTCAAACGGTCAGATGGGAG...TCTTTGTCCTCGCCACATAGTCGTCAGCGTAGGCACCTGGGAGCTGCTGATATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR CAA 90 bp GCCACGGAGGGTAGAGGGTGCTGTATGCCTGCCAGCTTCCACCCAGAACCCTCCATCCACCAGTCATTATaGTATTTCTCCTTGATGTGC +
Preference number: 5 (lower is better)
Translates to: ATEGRGCCMPASFHPEPSIHQSL*YFSLMC
Trigger: GCACATCAAGGAGAAATACAATAATGACTGGTGGAT...GGAGGGTTCTGGGTGGAAGCTGGCAGGCATACAGCACCCTCTACCCTCCGTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR CAA 90 bp CCTCCTCCATGTTCCCTGCACTCCAGTTCCGACCCCAGAGCAGGAGGGAAGACGTCAATGATGATGTGTTaGCTGGGGTTGTTGAGAACT +
Preference number: 5 (lower is better)
Translates to: PPPCSLHSSSDPRAGGKTSMMMC*LGLLRT
Trigger: AGTTCTCAACAACCCCAGCAAACACATCATCATTGA...CGTCTTCCCTCCTGCTCTGGGGTCGGAACTGGAGTGCAGGGAACATGGAGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344140.5
ENST00000394310.7
CDS TCA 90 bp GCGGACAAAGCTGTTGGATGTGGTATCCGAGGACGTGCTCCCATCTaGCCGTTTGAATCGCCCTTTCCTCTTGCTGTATTTGCCCTGAAG +
Preference number: 5 (lower is better)
Translates to: ADKAVGCGIRGRAPI*PFESPFPLAVFALK
Trigger: CTTCAGGGCAAATACAGCAAGAGGAAAGGGCGATTCAAACGGTCAGATGGGAGCACGTCCTCGGATACCACATCCAACAGCTTTGTCCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582877.1
CDS CCA 90 bp GAGGGCAGGAGGCAAGAGGTGTGGATTTGTGTGACTATGCAGGGGTaGTGTTGGACAAGGCATAGGAGGTTATGTGGCAAAAGAGGAGGA +
Preference number: 5 (lower is better)
Translates to: EGRRQEVWICVTMQG*CWTRHRRLCGKRGG
Trigger: TCCTCCTCTTTTGCCACATAACCTCCTATGCCTTGTCCAACACCACCCCTGCATAGTCACACAAATCCACACCTCTTGCCTCCTGCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539338.6
CDS-3UTR CAA 90 bp CCTCCTCCATGTTCCCTGCACTCCAGTTCCGACCCCAGAGCAGGAGGGAAGACGATCCACCAGTCATTATaGTATTTCTCCTTGATGTGC +
Preference number: 5 (lower is better)
Translates to: PPPCSLHSSSDPRAGGKTIHQSL*YFSLMC
Trigger: GCACATCAAGGAGAAATACAATAATGACTGGTGGAT...CGTCTTCCCTCCTGCTCTGGGGTCGGAACTGGAGTGCAGGGAACATGGAGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344140.5
ENST00000394310.7
CDS-3UTR CAA 90 bp ATCCAGAGCGACCAACTGAAGGGTCCGGGCCAGCTCGAAGATTCGCTCGATTTCATGTGTTTGCTGGGGTaGTTGAGAACTGAGCGCTTA +
Preference number: 5 (lower is better)
Translates to: IQSDQLKGPGQLEDSLDFMCLLG*LRTERL
Trigger: TAAGCGCTCAGTTCTCAACAACCCCAGCAAACACAT...GAAATCGAGCGAATCTTCGAGCTGGCCCGGACCCTTCAGTTGGTCGCTCTGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622445.4
CDS-3UTR CAA 90 bp AAGACAAGCTCCCCATGGGGTGTCCATGCTATGGCTTTCACCGACCAGACGATGTTCCGAGGCCGCTATTaGGACATTGAGGTGTTTGGA +
Preference number: 5 (lower is better)
Translates to: KTSSPWGVHAMAFTDQTMFRGRY*DIEVFG
Trigger: TCCAAACACCTCAATGTCCAAATAGCGGCCTCGGAA...CATCGTCTGGTCGGTGAAAGCCATAGCATGGACACCCCATGGGGAGCTTGTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS CCA 90 bp AGGAGGCAAGAGGTGTGGATTTGTGTGACTATGCAGGGGTGGTGTTaGACAAGGCATAGGAGGTTATGTGGCAAAAGAGGAGGACTGCAG +
Preference number: 5 (lower is better)
Translates to: RRQEVWICVTMQGWC*TRHRRLCGKRGGLQ
Trigger: CTGCAGTCCTCCTCTTTTGCCACATAACCTCCTATGCCTTGTCCAACACCACCCCTGCATAGTCACACAAATCCACACCTCTTGCCTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539338.6
CDS-3UTR CAA 90 bp CCTCCTCCATGTTCCCTGCACTCCAGTTCCGACCCCAGAGCAGGAGGGAAGACGTTATTGTATTTCTCCTaGATGTGCAGGAAGTCTTTG +
Preference number: 5 (lower is better)
Translates to: PPPCSLHSSSDPRAGGKTLLYFS*MCRKSL
Trigger: CAAAGACTTCCTGCACATCAAGGAGAAATACAATAA...CGTCTTCCCTCCTGCTCTGGGGTCGGAACTGGAGTGCAGGGAACATGGAGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344140.5
ENST00000394310.7
CDS-3UTR CAA 90 bp ACATTGAGCTTCCCATTGCCTTTGGCTCTACTTGTGGAGAGACAGGTAAGTGAACCCCAGTACTGCAGCTaGGGAGAAGGAGAGCCATCC +
Preference number: 5 (lower is better)
Translates to: TLSFPLPLALLVERQVSEPQYCS*GEGEPS
Trigger: GGATGGCTCTCCTTCTCCCAAGCTGCAGTACTGGGG...TTCACTTACCTGTCTCTCCACAAGTAGAGCCAAAGGCAATGGGAAGCTCAATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR CAA 90 bp GAGAAAGGGGACACTTCAGAAAGGTGGGTATCCCCCATCCATCCACAACAGGCAATGTGTTTGCTGGGGTaGTTGAGAACTGAGCGCTTA +
Preference number: 5 (lower is better)
Translates to: EKGDTSERWVSPIHPQQAMCLLG*LRTERL
Trigger: TAAGCGCTCAGTTCTCAACAACCCCAGCAAACACAT...TGCCTGTTGTGGATGGATGGGGGATACCCACCTTTCTGAAGTGTCCCCTTTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS CCA 90 bp ACAGACCTGGTAGTGGGAATGCACGTGCTTCTTCATGTGTGTGTGTaGATGTGCAAGTACAAGTGTGTGGAGGAGGGTGTGCTCTATAGT +
Preference number: 5 (lower is better)
Translates to: TDLVVGMHVLLHVCV*MCKYKCVEEGVLYS
Trigger: ACTATAGAGCACACCCTCCTCCACACACTTGTACTTGCACATCCACACACACACATGAAGAAGCACGTGCATTCCCACTACCAGGTCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539338.6
CDS-3UTR CAA 90 bp ACATTGAGCTTCCCATTGCCTTTGGCTCTACTTGTGGAGAGACAGGTAAGTGAAATGTGCAGGAAGTCTTaGGGCTCGAAGGTGATGGCC +
Preference number: 5 (lower is better)
Translates to: TLSFPLPLALLVERQVSEMCRKS*GSKVMA
Trigger: GGCCATCACCTTCGAGCCCAAAGACTTCCTGCACAT...TTCACTTACCTGTCTCTCCACAAGTAGAGCCAAAGGCAATGGGAAGCTCAATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR CAA 90 bp GCTCCTGGCTTGGGCACAATACATCAGAGGGCCAAAATCAAAGGATCATCTTTTCAAGCAGCTCCTGGCTaGGGCACAATACATCAGAGG +
Preference number: 5 (lower is better)
Translates to: APGLGTIHQRAKIKGSSFQAAPG*GTIHQR
Trigger: CCTCTGATGTATTGTGCCCAAGCCAGGAGCTGCTTG...AAAAGATGATCCTTTGATTTTGGCCCTCTGATGTATTGTGCCCAAGCCAGGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR CAA 90 bp TTTTCTTTTGAGTCAATGACTCAGGGCACAACATCTTCAGGCACCCACCCTTTCCTCCCATCTGACCGTTaGAATCGCCCTTTCCTCTTG +
Preference number: 5 (lower is better)
Translates to: FSFESMTQGTTSSGTHPFLPSDR*NRPFLL
Trigger: CAAGAGGAAAGGGCGATTCAAACGGTCAGATGGGAG...GAAAGGGTGGGTGCCTGAAGATGTTGTGCCCTGAGTCATTGACTCAAAAGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR CAA 90 bp ACTTCAGAAAGGTGGGTATCCCCCATCCATCCACAACAGGCAGGTAAAAACCGAGATTGTAGCCAACATTaGTCCGCACAGCAAATGCCA +
Preference number: 5 (lower is better)
Translates to: TSERWVSPIHPQQAGKNRDCSQH*SAQQMP
Trigger: TGGCATTTGCTGTGCGGACAAATGTTGGCTACAATC...TCGGTTTTTACCTGCCTGTTGTGGATGGATGGGGGATACCCACCTTTCTGAAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR CAA 90 bp TATCAGCAGCTCCCAGGTGCCTACGCTGACGACTATGTGGCGAGGACAAAGAAGTTATTGTATTTCTCCTaGATGTGCAGGAAGTCTTTG +
Preference number: 5 (lower is better)
Translates to: YQQLPGAYADDYVARTKKLLYFS*MCRKSL
Trigger: CAAAGACTTCCTGCACATCAAGGAGAAATACAATAA...CTTCTTTGTCCTCGCCACATAGTCGTCAGCGTAGGCACCTGGGAGCTGCTGATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR CAA 90 bp ATGGGAGAAAGGGGACACTTCAGAAAGGTGGGTATCCCCCATCCATCCACAACATCAATGATGATGTGTTaGCTGGGGTTGTTGAGAACT +
Preference number: 5 (lower is better)
Translates to: MGERGHFRKVGIPHPSTTSMMMC*LGLLRT
Trigger: AGTTCTCAACAACCCCAGCAAACACATCATCATTGA...TGTTGTGGATGGATGGGGGATACCCACCTTTCTGAAGTGTCCCCTTTCTCCCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR CAA 90 bp ACATTGAGCTTCCCATTGCCTTTGGCTCTACTTGTGGAGAGACAGGTAAGTGAATGTGTATTTAAGACATaGCACCAGTGGGTCTGGATC +
Preference number: 5 (lower is better)
Translates to: TLSFPLPLALLVERQVSECVFKT*HQWVWI
Trigger: GATCCAGACCCACTGGTGCAATGTCTTAAATACACA...TTCACTTACCTGTCTCTCCACAAGTAGAGCCAAAGGCAATGGGAAGCTCAATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS-3UTR CAA 90 bp AGGATCATCTTTTCTTTTGAGTCAATGACTCAGGGCACAACATCTTCAGGCACCATCCACCAGTCATTATaGTATTTCTCCTTGATGTGC +
Preference number: 5 (lower is better)
Translates to: RIIFSFESMTQGTTSSGTIHQSL*YFSLMC
Trigger: GCACATCAAGGAGAAATACAATAATGACTGGTGGAT...GGTGCCTGAAGATGTTGTGCCCTGAGTCATTGACTCAAAAGAAAAGATGATCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394303.8
ENST00000622445.4
CDS CCA 72 bp CGCCTCCATCCCGGCACCCTCAGTGCCTGGCCCTGCTaGCCTAGGGGGTGGCCCAAACTGCCCGTTCCCTTG +
Preference number: 6 (lower is better)
Translates to: RLHPGTLSAWPC*PRGWPKLPVPL
Trigger: CAAGGGAACGGGCAGTTTGGGCCACCCCCTAGGCCAGCAGGGCCAGGCACTGAGGGTGCCGGGATGGAGGCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539338.6
CDS GCA 72 bp GTGCCTGGCCCTGCTGGCCTAGGGGGTGGCCCAAACTaGCCGTTCCCTTGGGGGCTCGGGTTACAAGCAGAG +
Preference number: 6 (lower is better)
Translates to: VPGPAGLGGGPN*PFPWGLGLQAE
Trigger: CTCTGCTTGTAACCCGAGCCCCCAAGGGAACGGGCAGTTTGGGCCACCCCCTAGGCCAGCAGGGCCAGGCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000539338.6
CDS GCA 72 bp ACGGCCTGCTCCGCAGGATGGGGCCACCACAGATTTTaGCAGCTTCACCACCACGGTCCGGCTGGGCGCCTC +
Preference number: 6 (lower is better)
Translates to: TACSAGWGHHRF*QLHHHGPAGRL
Trigger: GAGGCGCCCAGCCGGACCGTGGTGGTGAAGCTGGCAAAATCTGTGGTGGCCCCATCCTGCGGAGCAGGCCGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582414.1
CDS GCA 72 bp GAAGACGGGCAGGGCGCCCACTACATGGCATGTTCCTaGTCCTGGGGCACCACACTGCCCCGCTGTGAGGAC +
Preference number: 6 (lower is better)
Translates to: EDGQGAHYMACS*SWGTTLPRCED
Trigger: GTCCTCACAGCGGGGCAGTGTGGTGCCCCAGGAGCAGGAACATGCCATGTAGTGGGCGCCCTGCCCGTCTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344140.5
ENST00000394310.7
CDS GCA 72 bp CTGGAGCCGAGGCGGTTCTGGCGCAGCTTCTGTTCCTaGAGCAGGCGAAGGCTGTCCAGTTTGACGGGGCTG +
Preference number: 6 (lower is better)
Translates to: LEPRRFWRSFCS*SRRRLSSLTGL
Trigger: CAGCCCCGTCAAACTGGACAGCCTTCGCCTGCTGCAGGAACAGAAGCTGCGCCAGAACCGCCTCGGCTCCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000344140.5
ENST00000394303.8
ENST00000394310.7
ENST00000492737.5
ENST00000536613.6
ENST00000539338.6
ENST00000577582.5
ENST00000582877.1
ENST00000622445.4
CDS CCA 72 bp ACCAGCTTCGGCCTGAGCTCTCTGCACTATCAGCCGTaGACGGCCTGCTCCGCAGGATGGGGCCACCACAGA +
Preference number: 6 (lower is better)
Translates to: TSFGLSSLHYQP*TACSAGWGHHR
Trigger: TCTGTGGTGGCCCCATCCTGCGGAGCAGGCCGTCCACGGCTGATAGTGCAGAGAGCTCAGGCCGAAGCTGGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539338.6
ENST00000582414.1
CDS CAA 90 bp GCCTGGCCCTGCTGGCCTAGGGGGTGGCCCAAACTGCCCGTTCCCTaGGGGGCTCGGGTTACAAGCAGAGTTGCTACATGTGCAGACTGC +
Preference number: 6 (lower is better)
Translates to: AWPCWPRGWPKLPVP*GARVTSRVATCADC
Trigger: GCAGTCTGCACATGTAGCAACTCTGCTTGTAACCCGAGCCCCCAAGGGAACGGGCAGTTTGGGCCACCCCCTAGGCCAGCAGGGCCAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000539338.6
CDS GCA 72 bp GGCCTGAGCTCTCTGCACTATCAGCCGTGGACGGCCTaGTCCGCAGGATGGGGCCACCACAGATTTTGCCAG +
Preference number: 6 (lower is better)
Translates to: GLSSLHYQPWTA*SAGWGHHRFCQ
Trigger: CTGGCAAAATCTGTGGTGGCCCCATCCTGCGGAGCAGGCCGTCCACGGCTGATAGTGCAGAGAGCTCAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000539338.6
ENST00000582414.1
CDS CCA 72 bp TCGACTTCTGCTTCTGTTTGGCACTGGCAGGGGGTGTaGGGCGGCGGGTGCCAGTCACCACATCTCCCAGAC +
Preference number: 6 (lower is better)
Translates to: STSASVWHWQGV*GGGCQSPHLPD
Trigger: GTCTGGGAGATGTGGTGACTGGCACCCGCCGCCCCACACCCCCTGCCAGTGCCAAACAGAAGCAGAAGTCGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394303.8
ENST00000394310.7
ENST00000539338.6
CDS CCA 72 bp GCACATGCTCTGTCGACTTCTGCTTCTGTTTGGCACTaGCAGGGGGTGTGGGGCGGCGGGTGCCAGTCACCA +
Preference number: 6 (lower is better)
Translates to: AHALSTSASVWH*QGVWGGGCQSP
Trigger: TGGTGACTGGCACCCGCCGCCCCACACCCCCTGCCAGTGCCAAACAGAAGCAGAAGTCGACAGAGCATGTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394303.8
ENST00000394310.7
ENST00000539338.6
CDS TCA 72 bp CATCCATTCCAGGGACTGCAGCCACCAGCTTCGGCCTaGGCTCTCTGCACTATCAGCCGTGGACGGCCTGCT +
Preference number: 6 (lower is better)
Translates to: HPFQGLQPPASA*ALCTISRGRPA
Trigger: AGCAGGCCGTCCACGGCTGATAGTGCAGAGAGCTCAGGCCGAAGCTGGTGGCTGCAGTCCCTGGAATGGATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539338.6
ENST00000582414.1
CDS CCA 72 bp GCTGGCCTAGGGGGTGGCCCAAACTGCCCGTTCCCTTaGGGGCTCGGGTTACAAGCAGAGTTGCTACATGTG +
Preference number: 6 (lower is better)
Translates to: AGLGGGPNCPFP*GLGLQAELLHV
Trigger: CACATGTAGCAACTCTGCTTGTAACCCGAGCCCCCAAGGGAACGGGCAGTTTGGGCCACCCCCTAGGCCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539338.6
CDS CCA 72 bp CTGCACTATCAGCCGTGGACGGCCTGCTCCGCAGGATaGGGCCACCACAGATTTTGCCAGCTTCGGGGATCA +
Preference number: 6 (lower is better)
Translates to: LHYQPWTACSAG*GHHRFCQLRGS
Trigger: TGATCCCCGAAGCTGGCAAAATCTGTGGTGGCCCCATCCTGCGGAGCAGGCCGTCCACGGCTGATAGTGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577926.1
CDS TCA 72 bp CACGCTGGAGTAAAGGCTGCCCTCCGTCAGCTTTCCTaGGAGGCTGTTCTACCCGCTGCCACCCCACTCCAT +
Preference number: 6 (lower is better)
Translates to: HAGVKAALRQLS*EAVLPAATPLH
Trigger: ATGGAGTGGGGTGGCAGCGGGTAGAACAGCCTCTCAGGAAAGCTGACGGAGGGCAGCCTTTACTCCAGCGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539338.6
CDS CCA 72 bp GAGTTATCGCCTGATTTGCTGGAGCCGAGGCGGTTCTaGCGCAGCTTCTGTTCCTGCAGCAGGCGAAGGCTG +
Preference number: 6 (lower is better)
Translates to: ELSPDLLEPRRF*RSFCSCSRRRL
Trigger: CAGCCTTCGCCTGCTGCAGGAACAGAAGCTGCGCCAGAACCGCCTCGGCTCCAGCAAATCAGGCGATAACTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000344140.5
ENST00000394303.8
ENST00000394310.7
ENST00000492737.5
ENST00000536613.6
ENST00000539338.6
ENST00000577582.5
ENST00000582877.1
ENST00000622445.4
CDS CCA 72 bp GGCGGGTGCCAGTCACCACATCTCCCAGACTGGAACTaGAGTTATCGCCTGATTTGCTGGAGCCGAGGCGGT +
Preference number: 6 (lower is better)
Translates to: GGCQSPHLPDWN*SYRLICWSRGG
Trigger: ACCGCCTCGGCTCCAGCAAATCAGGCGATAACTCCAGTTCCAGTCTGGGAGATGTGGTGACTGGCACCCGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344140.5
ENST00000394303.8
ENST00000394310.7
ENST00000536613.6
ENST00000539338.6
ENST00000577582.5
ENST00000622445.4
CDS CCA 72 bp CCAGCACCCGCTGAGATAGACTCAGCTGAGGTCCAGTaGCATCCATTCCAGGGACTGCAGCCACCAGCTTCG +
Preference number: 6 (lower is better)
Translates to: PAPAEIDSAEVQ*HPFQGLQPPAS
Trigger: CGAAGCTGGTGGCTGCAGTCCCTGGAATGGATGCCACTGGACCTCAGCTGAGTCTATCTCAGCGGGTGCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539338.6
ENST00000582414.1
CDS CCA 72 bp TCCCAGCCCTGGCCATGTCCTGGCGGACAAAGCTGTTaGATGTGGTATCCGAGGACGTGCTCCCATCTGACC +
Preference number: 6 (lower is better)
Translates to: SQPWPCPGGQSC*MWYPRTCSHLT
Trigger: GGTCAGATGGGAGCACGTCCTCGGATACCACATCCAACAGCTTTGTCCGCCAGGACATGGCCAGGGCTGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577926.1
CDS CAA 72 bp TGCTGGCCTAGGGGGTGGCCCAAACTGCCCGTTCCCTaGGGGGCTCGGGTTACAAGCAGAGTTGCTACATGT +
Preference number: 6 (lower is better)
Translates to: CWPRGWPKLPVP*GARVTSRVATC
Trigger: ACATGTAGCAACTCTGCTTGTAACCCGAGCCCCCAAGGGAACGGGCAGTTTGGGCCACCCCCTAGGCCAGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000539338.6
CDS GCA 72 bp ACTCAGCTGAGGTCCAGTGGCATCCATTCCAGGGACTaGAGCCACCAGCTTCGGCCTGAGCTCTCTGCACTA +
Preference number: 6 (lower is better)
Translates to: TQLRSSGIHSRD*SHQLRPELSAL
Trigger: TAGTGCAGAGAGCTCAGGCCGAAGCTGGTGGCTGCAGTCCCTGGAATGGATGCCACTGGACCTCAGCTGAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539338.6
ENST00000582414.1
CDS CCA 72 bp TGTAGGACTCCGCTGAGCCCTGGCGGACAAAGCTGTTaGATGTGGTATCCGAGGACGTGCTCCCATCTGACC +
Preference number: 6 (lower is better)
Translates to: CRTPLSPGGQSC*MWYPRTCSHLT
Trigger: GGTCAGATGGGAGCACGTCCTCGGATACCACATCCAACAGCTTTGTCCGCCAGGGCTCAGCGGAGTCCTACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344140.5
ENST00000394303.8
ENST00000394310.7
ENST00000582877.1
ENST00000622445.4
CDS CCA 72 bp CTGCACTATCAGCCGTGGACGGCCTGCTCCGCAGGATaGGGCCACCACAGATTTTGCCAGCTTCTGTTCAAG +
Preference number: 6 (lower is better)
Translates to: LHYQPWTACSAG*GHHRFCQLLFK
Trigger: CTTGAACAGAAGCTGGCAAAATCTGTGGTGGCCCCATCCTGCGGAGCAGGCCGTCCACGGCTGATAGTGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539338.6
CDS CAA 72 bp TTCCCAGCCCTGGCCATGTCCTGGCGGACAAAGCTGTaGGATGTGGTATCCGAGGACGTGCTCCCATCTGAC +
Preference number: 6 (lower is better)
Translates to: FPALAMSWRTKL*DVVSEDVLPSD
Trigger: GTCAGATGGGAGCACGTCCTCGGATACCACATCCAACAGCTTTGTCCGCCAGGACATGGCCAGGGCTGGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577926.1
CDS CAA 72 bp GTGCTCCCATCTGACCGTTTGAATCGCCCTTTCCTCTaGCTGTATTTGCCCTGCGGGCTGGGGTCGAAGACC +
Preference number: 6 (lower is better)
Translates to: VLPSDRLNRPFL*LYLPCGLGSKT
Trigger: GGTCTTCGACCCCAGCCCGCAGGGCAAATACAGCAAGAGGAAAGGGCGATTCAAACGGTCAGATGGGAGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344140.5
ENST00000394303.8
ENST00000394310.7
ENST00000622445.4
CDS CAA 72 bp GTGCTCCCATCTGACCGTTTGAATCGCCCTTTCCTCTaGCTGTATTTGCCGGAGAGGGCCCAGAGCACAGCC +
Preference number: 6 (lower is better)
Translates to: VLPSDRLNRPFL*LYLPERAQSTA
Trigger: GGCTGTGCTCTGGGCCCTCTCCGGCAAATACAGCAAGAGGAAAGGGCGATTCAAACGGTCAGATGGGAGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577926.1
CDS CAA 72 bp TCAGGCAATGCACCCAGTCAGAGAGGCGGGTCCTGGTaGGATCAGCATGGAGAGCCAGTGTCAAGACCCTTG +
Preference number: 6 (lower is better)
Translates to: SGNAPSQRGGSW*DQHGEPVSRPL
Trigger: CAAGGGTCTTGACACTGGCTCTCCATGCTGATCCAACCAGGACCCGCCTCTCTGACTGGGTGCATTGCCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582544.1
CDS CAA 90 bp AAGCTGTTGGATGTGGTATCCGAGGACGTGCTCCCATCTGACCGTTaGAATCGCCCTTTCCTCTTGCTGTATTTGCCCTGCGGGCTGGGG +
Preference number: 6 (lower is better)
Translates to: KLLDVVSEDVLPSDR*NRPFLLLYLPCGLG
Trigger: CCCCAGCCCGCAGGGCAAATACAGCAAGAGGAAAGGGCGATTCAAACGGTCAGATGGGAGCACGTCCTCGGATACCACATCCAACAGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344140.5
ENST00000394303.8
ENST00000394310.7
ENST00000622445.4
CDS GCA 72 bp AGCACAGCGTCATTCTTCCCAGCCCTGGCCATGTCCTaGAACAGGAGGGATGAGGGGGTGATTGAAGAAAGG +
Preference number: 6 (lower is better)
Translates to: STASFFPALAMS*NRRDEGVIEER
Trigger: CCTTTCTTCAATCACCCCCTCATCCCTCCTGTTGCAGGACATGGCCAGGGCTGGGAAGAATGACGCTGTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539338.6
CDS CAA 90 bp AAGCTGTTGGATGTGGTATCCGAGGACGTGCTCCCATCTGACCGTTaGAATCGCCCTTTCCTCTTGCTGTATTTGCCGGAGAGGGCCCAG +
Preference number: 6 (lower is better)
Translates to: KLLDVVSEDVLPSDR*NRPFLLLYLPERAQ
Trigger: CTGGGCCCTCTCCGGCAAATACAGCAAGAGGAAAGGGCGATTCAAACGGTCAGATGGGAGCACGTCCTCGGATACCACATCCAACAGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577926.1
CDS TCA 72 bp GGTTGGATCAGCATGGAGAGCCAGTGTCAAGACCCTTaGATGCTCCATAACTCTCAGCCCTGGGCACCTCTG +
Preference number: 6 (lower is better)
Translates to: GWISMESQCQDP*MLHNSQPWAPL
Trigger: CAGAGGTGCCCAGGGCTGAGAGTTATGGAGCATTCAAGGGTCTTGACACTGGCTCTCCATGCTGATCCAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582544.1
CDS GCA 72 bp CTTGAATGCTCCATAACTCTCAGCCCTGGGCACCTCTaGAGAAAGGACCTCAGCAGCCCTGTGTCTACCCTA +
Preference number: 6 (lower is better)
Translates to: LECSITLSPGHL*RKDLSSPVSTL
Trigger: TAGGGTAGACACAGGGCTGCTGAGGTCCTTTCTGCAGAGGTGCCCAGGGCTGAGAGTTATGGAGCATTCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582544.1
CDS GCA 72 bp GGATCAGCATGGAGAGCCAGTGTCAAGACCCTTGAATaGTCCATAACTCTCAGCCCTGGGCACCTCTGCAGA +
Preference number: 6 (lower is better)
Translates to: GSAWRASVKTLE*SITLSPGHLCR
Trigger: TCTGCAGAGGTGCCCAGGGCTGAGAGTTATGGAGCATTCAAGGGTCTTGACACTGGCTCTCCATGCTGATCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582544.1
CDS CCA 72 bp AGGAAGAATTGGAGGCTGGGGTCTGACTCCCTGGGTTaGCAAACACTGAAGGAGCCAAGGTCCTTTTCTGCC +
Preference number: 6 (lower is better)
Translates to: RKNWRLGSDSLG*QTLKEPRSFSA
Trigger: GGCAGAAAAGGACCTTGGCTCCTTCAGTGTTTGCCAACCCAGGGAGTCAGACCCCAGCCTCCAATTCTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000492737.5
ENST00000539338.6
ENST00000577926.1
CDS CCA 72 bp ACCCAGTCAGAGAGGCGGGTCCTGGTTGGATCAGCATaGAGAGCCAGTGTCAAGACCCTTGAATGCTCCATA +
Preference number: 6 (lower is better)
Translates to: TQSERRVLVGSA*RASVKTLECSI
Trigger: TATGGAGCATTCAAGGGTCTTGACACTGGCTCTCCATGCTGATCCAACCAGGACCCGCCTCTCTGACTGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582544.1
CDS TCA 72 bp ATGTGGTATCCGAGGACGTGCTCCCATCTGACCGTTTaGATCGCCCTTTCCTCTTGCTGTATTTGCCCTGCG +
Preference number: 6 (lower is better)
Translates to: MWYPRTCSHLTV*IALSSCCICPA
Trigger: CGCAGGGCAAATACAGCAAGAGGAAAGGGCGATTCAAACGGTCAGATGGGAGCACGTCCTCGGATACCACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344140.5
ENST00000394303.8
ENST00000394310.7
ENST00000622445.4
CDS CAA 72 bp GATGTGGTATCCGAGGACGTGCTCCCATCTGACCGTTaGAATCGCCCTTTCCTCTTGCTGTATTTGCCCTGC +
Preference number: 6 (lower is better)
Translates to: DVVSEDVLPSDR*NRPFLLLYLPC
Trigger: GCAGGGCAAATACAGCAAGAGGAAAGGGCGATTCAAACGGTCAGATGGGAGCACGTCCTCGGATACCACATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344140.5
ENST00000394303.8
ENST00000394310.7
ENST00000622445.4
CDS CAA 72 bp GATGTGGTATCCGAGGACGTGCTCCCATCTGACCGTTaGAATCGCCCTTTCCTCTTGCTGTATTTGCCGGAG +
Preference number: 6 (lower is better)
Translates to: DVVSEDVLPSDR*NRPFLLLYLPE
Trigger: CTCCGGCAAATACAGCAAGAGGAAAGGGCGATTCAAACGGTCAGATGGGAGCACGTCCTCGGATACCACATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577926.1
CDS CAA 90 bp GGCCCAAACTGCCCGTTCCCTTGGGGGCTCGGGTTACAAGCAGAGTaGCTACATGTGCAGACTGCTAGGGTATATTTAGCTCAGAGATGT +
Preference number: 6 (lower is better)
Translates to: GPNCPFPWGLGLQAE*LHVQTARVYLAQRC
Trigger: ACATCTCTGAGCTAAATATACCCTAGCAGTCTGCACATGTAGCAACTCTGCTTGTAACCCGAGCCCCCAAGGGAACGGGCAGTTTGGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539338.6
CDS TCA 72 bp ATGTGGTATCCGAGGACGTGCTCCCATCTGACCGTTTaGATCGCCCTTTCCTCTTGCTGTATTTGCCGGAGA +
Preference number: 6 (lower is better)
Translates to: MWYPRTCSHLTV*IALSSCCICRR
Trigger: TCTCCGGCAAATACAGCAAGAGGAAAGGGCGATTCAAACGGTCAGATGGGAGCACGTCCTCGGATACCACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577926.1
CDS CCA 72 bp ATGACACCACAAGGGCTAAGACAAGGTGGTATTAGGTaGAAGGGACCAGGAGCTGAGATTTCTCAGGCCCCT +
Preference number: 6 (lower is better)
Translates to: MTPQGLRQGGIR*KGPGAEISQAP
Trigger: AGGGGCCTGAGAAATCTCAGCTCCTGGTCCCTTCCACCTAATACCACCTTGTCTTAGCCCTTGTGGTGTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539338.6
ENST00000582414.1
CDS CCA 72 bp TCTAAGGTCACACAGCAGATTCAGCCTGGCTCTGCTTaGCTCAGAAGCCTTTTGTCCACTAGCACTCTGGCT +
Preference number: 6 (lower is better)
Translates to: SKVTQQIQPGSA*LRSLLSTSTLA
Trigger: AGCCAGAGTGCTAGTGGACAAAAGGCTTCTGAGCCAAGCAGAGCCAGGCTGAATCTGCTGTGTGACCTTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577582.5
CDS CAA 72 bp TGCCCGTTCCCTTGGGGGCTCGGGTTACAAGCAGAGTaGCTACATGTGCAGACTGCTAGGGTATATTTAGCT +
Preference number: 6 (lower is better)
Translates to: CPFPWGLGLQAE*LHVQTARVYLA
Trigger: AGCTAAATATACCCTAGCAGTCTGCACATGTAGCAACTCTGCTTGTAACCCGAGCCCCCAAGGGAACGGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539338.6
CDS TCA 72 bp ATGTGGTATCCGAGGACGTGCTCCCATCTGACCGTTTaGATCGCCCTTTCCTCTTGCTGTATTTGCCCTGAA +
Preference number: 6 (lower is better)
Translates to: MWYPRTCSHLTV*IALSSCCICPE
Trigger: TTCAGGGCAAATACAGCAAGAGGAAAGGGCGATTCAAACGGTCAGATGGGAGCACGTCCTCGGATACCACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582877.1
CDS CCA 72 bp GTAGTGGGAATGCACGTGCTTCTTCATGTGTGTGTGTaGATGTGCAAGTACAAGTGTGTGGAGGAGGGTGTG +
Preference number: 6 (lower is better)
Translates to: VVGMHVLLHVCV*MCKYKCVEEGV
Trigger: CACACCCTCCTCCACACACTTGTACTTGCACATCCACACACACACATGAAGAAGCACGTGCATTCCCACTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539338.6
CDS GCA 72 bp AGTCATTATTGTATTTATGTCCCTGGCACACCGCCATaGCAGTTCAGGCCCCCTAACAAACCCTCCCAACAA +
Preference number: 6 (lower is better)
Translates to: SHYCIYVPGTPP*QFRPPNKPSQQ
Trigger: TTGTTGGGAGGGTTTGTTAGGGGGCCTGAACTGGCATGGCGGTGTGCCAGGGACATAAATACAATAATGACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000577582.5
CDS CCA 72 bp GAGGTGTGGATTTGTGTGACTATGCAGGGGTGGTGTTaGACAAGGCATAGGAGGTTATGTGGCAAAAGAGGA +
Preference number: 6 (lower is better)
Translates to: EVWICVTMQGWC*TRHRRLCGKRG
Trigger: TCCTCTTTTGCCACATAACCTCCTATGCCTTGTCCAACACCACCCCTGCATAGTCACACAAATCCACACCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539338.6
CDS CCA 72 bp AGGCAAGAGGTGTGGATTTGTGTGACTATGCAGGGGTaGTGTTGGACAAGGCATAGGAGGTTATGTGGCAAA +
Preference number: 6 (lower is better)
Translates to: RQEVWICVTMQG*CWTRHRRLCGK
Trigger: TTTGCCACATAACCTCCTATGCCTTGTCCAACACCACCCCTGCATAGTCACACAAATCCACACCTCTTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539338.6
CDS CCA 72 bp TCTCCTAGGACACAAGAGAACCCAAGAGTTCCAGGCTaGTACAGACCGAAGAGGCAAGTTAAGAGCAGGATA +
Preference number: 6 (lower is better)
Translates to: SPRTQENPRVPG*YRPKRQVKSRI
Trigger: TATCCTGCTCTTAACTTGCCTCTTCGGTCTGTACCAGCCTGGAACTCTTGGGTTCTCTTGTGTCCTAGGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539338.6
CDS CAA 72 bp TCATTATTGTATTTCTCCTTGATGTGCAGGAAGTCTTaGGGCTCGAAGGTGATGGCCACTCCCTGCACAGGC +
Preference number: 6 (lower is better)
Translates to: SLLYFSLMCRKS*GSKVMATPCTG
Trigger: GCCTGTGCAGGGAGTGGCCATCACCTTCGAGCCCAAAGACTTCCTGCACATCAAGGAGAAATACAATAATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000344140.5
ENST00000394303.8
ENST00000394310.7
ENST00000492737.5
ENST00000536613.6
ENST00000539338.6
ENST00000582877.1
ENST00000622445.4