RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CACNA1I (Homo sapiens)

Ensembl gene IDs: ENSG00000100346

Ensembl transcript IDs: ENST00000401624.5, ENST00000402142.4, ENST00000404898.5, ENST00000407673.5

Found 1140 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GACTCCGCTCAGCCCGGCTGTCGGGCGCCTGTGCCCTGCGGGCCCTaGGCGATCCCAGGTGTGGACGAAGTATTGCTGTCTGCTCCTGGC +
Preference number: 1 (lower is better)
Translates to: DSAQPGCRAPVPCGP*AIPGVDEVLLSAPG
Trigger: GCCAGGAGCAGACAGCAATACTTCGTCCACACCTGGGATCGCGCAGGGCCCGCAGGGCACAGGCGCCCGACAGCCGGGCTGAGCGGAGTC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR GCA 90 bp GCCTGGCTAACCCAGACTCCGCTCAGCCCGGCTGTCGGGCGCCTGTaGCCTGCGGGCCCTGCGCGATCCCAGGTGTGGACGAAGTATTGC +
Preference number: 1 (lower is better)
Translates to: AWLTQTPLSPAVGRL*PAGPARSQVWTKYC
Trigger: GCAATACTTCGTCCACACCTGGGATCGCGCAGGGCCCGCAGGGCACAGGCGCCCGACAGCCGGGCTGAGCGGAGTCTGGGTTAGCCAGGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR GCA 90 bp TGGGTAGGAGGGCTGTGGCCCTGGCCAATCCAGTACGGGGGACCCTaGAGCCCGAGGCTTCTCATCCACCAGACCCGCCCTCCCACCTCC +
Preference number: 1 (lower is better)
Translates to: WVGGLWPWPIQYGGP*SPRLLIHQTRPPTS
Trigger: GGAGGTGGGAGGGCGGGTCTGGTGGATGAGAAGCCTCGGGCTGCAGGGTCCCCCGTACTGGATTGGCCAGGGCCACAGCCCTCCTACCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000401624.5
3UTR CCA 90 bp CTCTGTCACCCACAGGAACAAGGTCAAGTGCCTGGGATCGGCAGGTaGGGCCTCCAGGAGCCTGGGACGGGCCAGGCCATCTCCCAGTGC +
Preference number: 1 (lower is better)
Translates to: LCHPQEQGQVPGIGR*GLQEPGTGQAISQC
Trigger: GCACTGGGAGATGGCCTGGCCCGTCCCAGGCTCCTGGAGGCCCCACCTGCCGATCCCAGGCACTTGACCTTGTTCCTGTGGGTGACAGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR CCA 90 bp CCCTCAGTGCTTCAGACCTCTGTGTGCCCGTGGGTAGGAGGGCTGTaGCCCTGGCCAATCCAGTACGGGGGACCCTGCAGCCCGAGGCTT +
Preference number: 1 (lower is better)
Translates to: PSVLQTSVCPWVGGL*PWPIQYGGPCSPRL
Trigger: AAGCCTCGGGCTGCAGGGTCCCCCGTACTGGATTGGCCAGGGCCACAGCCCTCCTACCCACGGGCACACAGAGGTCTGAAGCACTGAGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000401624.5
3UTR CCA 90 bp GTGCTTCAGACCTCTGTGTGCCCGTGGGTAGGAGGGCTGTGGCCCTaGCCAATCCAGTACGGGGGACCCTGCAGCCCGAGGCTTCTCATC +
Preference number: 1 (lower is better)
Translates to: VLQTSVCPWVGGLWP*PIQYGGPCSPRLLI
Trigger: GATGAGAAGCCTCGGGCTGCAGGGTCCCCCGTACTGGATTGGCCAGGGCCACAGCCCTCCTACCCACGGGCACACAGAGGTCTGAAGCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000401624.5
3UTR CCA 90 bp GCTGTCGGGCGCCTGTGCCCTGCGGGCCCTGCGCGATCCCAGGTGTaGACGAAGTATTGCTGTCTGCTCCTGGCTCCTGAGGTAAAGAAG +
Preference number: 1 (lower is better)
Translates to: AVGRLCPAGPARSQV*TKYCCLLLAPEVKK
Trigger: CTTCTTTACCTCAGGAGCCAGGAGCAGACAGCAATACTTCGTCCACACCTGGGATCGCGCAGGGCCCGCAGGGCACAGGCGCCCGACAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR CCA 90 bp ATGTATGTATATGCACTGGAAGGGCCACCATGGGCCACGCAGGCCTaGCTAACCCAGACTCCGCTCAGCCCGGCTGTCGGGCGCCTGTGC +
Preference number: 1 (lower is better)
Translates to: MYVYALEGPPWATQA*LTQTPLSPAVGRLC
Trigger: GCACAGGCGCCCGACAGCCGGGCTGAGCGGAGTCTGGGTTAGCCAGGCCTGCGTGGCCCATGGTGGCCCTTCCAGTGCATATACATACAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR CCA 90 bp GTGGTGCCCTCGGCCTTTGGTTGGGTCCTTCCCCTCCCAGTCCCTTaGACTTCCAGGCCTGGCTTAGATCCTGCCCCTTGCCCACAGACC +
Preference number: 1 (lower is better)
Translates to: VVPSAFGWVLPLPVP*TSRPGLDPAPCPQT
Trigger: GGTCTGTGGGCAAGGGGCAGGATCTAAGCCAGGCCTGGAAGTCCAAGGGACTGGGAGGGGAAGGACCCAACCAAAGGCCGAGGGCACCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401624.5
3UTR TCA 90 bp CGCCAGAGCACACAGCCTGGTGTGACGGGTCAGACAGTCACCCAGTaGATCAACTGCACTCACTGTGGGAGCCGGCCCGGCCCCATTTCC +
Preference number: 1 (lower is better)
Translates to: RQSTQPGVTGQTVTQ*INCTHCGSRPGPIS
Trigger: GGAAATGGGGCCGGGCCGGCTCCCACAGTGAGTGCAGTTGATTCACTGGGTGACTGTCTGACCCGTCACACCAGGCTGTGTGCTCTGGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401624.5
3UTR GCA 90 bp GGGAGAGGAAGAGGATTTGGCCAGACTGGGCCGTCTCTGCACAGATaGCAAGGTGCCTGCCCACCACCGCTCTACGGAGCCCAGCAGACA +
Preference number: 1 (lower is better)
Translates to: GRGRGFGQTGPSLHR*QGACPPPLYGAQQT
Trigger: TGTCTGCTGGGCTCCGTAGAGCGGTGGTGGGCAGGCACCTTGGCATCTGTGCAGAGACGGCCCAGTCTGGCCAAATCCTCTTCCTCTCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR CCA 90 bp CAACACTGGTGGTGGCTGCCGCTTGGTTTCTCTACACCCGGGCCATaGGCCAGCAGGTACCAGCGCCATCAGCAACTAGGAGGGAAGTTC +
Preference number: 1 (lower is better)
Translates to: QHWWWLPLGFSTPGP*ASRYQRHQQLGGKF
Trigger: GAACTTCCCTCCTAGTTGCTGATGGCGCTGGTACCTGCTGGCCCATGGCCCGGGTGTAGAGAAACCAAGCGGCAGCCACCACCAGTGTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR CCA 90 bp CCGGCAGGCAGGGAGTTTGTGTCCTGCCCGCCAGAGCACACAGCCTaGTGTGACGGGTCAGACAGTCACCCAGTGAATCAACTGCACTCA +
Preference number: 1 (lower is better)
Translates to: PAGREFVSCPPEHTA*CDGSDSHPVNQLHS
Trigger: TGAGTGCAGTTGATTCACTGGGTGACTGTCTGACCCGTCACACCAGGCTGTGTGCTCTGGCGGGCAGGACACAAACTCCCTGCCTGCCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401624.5
3UTR GCA 90 bp TCCCTGCTCTGTGGACCCTGGAGCCTTCGCTCATGCCCATCCCTTTaGCTAGAACACCTGCCTCGAGGTGTCTGCTTGCAGAGTCACACG +
Preference number: 1 (lower is better)
Translates to: SLLCGPWSLRSCPSL*LEHLPRGVCLQSHT
Trigger: CGTGTGACTCTGCAAGCAGACACCTCGAGGCAGGTGTTCTAGGCAAAGGGATGGGCATGAGCGAAGGCTCCAGGGTCCACAGAGCAGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR TCA 90 bp AGGCAGGGAGTTTGTGTCCTGCCCGCCAGAGCACACAGCCTGGTGTaGCGGGTCAGACAGTCACCCAGTGAATCAACTGCACTCACTGTG +
Preference number: 1 (lower is better)
Translates to: RQGVCVLPARAHSLV*RVRQSPSESTALTV
Trigger: CACAGTGAGTGCAGTTGATTCACTGGGTGACTGTCTGACCCGTCACACCAGGCTGTGTGCTCTGGCGGGCAGGACACAAACTCCCTGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401624.5
3UTR CCA 90 bp GCCCAACCTTCCACATGGTATTCCCAGGCCACACAGCCCCTCTTCTaGGCTCCAATACACGTGTCCCTCCAGCAACACGCGGACTTGCAA +
Preference number: 1 (lower is better)
Translates to: AQPSTWYSQATQPLF*APIHVSLQQHADLQ
Trigger: TTGCAAGTCCGCGTGTTGCTGGAGGGACACGTGTATTGGAGCCCAGAAGAGGGGCTGTGTGGCCTGGGAATACCATGTGGAAGGTTGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR GCA 90 bp GTGTCCCTCCAGCAACACGCGGACTTGCAAAAAGTCAAGTCTGTCTaGTTCCCTCCAACTGCGAGAGCTCAGGGTCAGCCAGGAGCAGTC +
Preference number: 1 (lower is better)
Translates to: VSLQQHADLQKVKSV*FPPTARAQGQPGAV
Trigger: GACTGCTCCTGGCTGACCCTGAGCTCTCGCAGTTGGAGGGAAGCAGACAGACTTGACTTTTTGCAAGTCCGCGTGTTGCTGGAGGGACAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR GCA 90 bp CGCTCATGCCCATCCCTTTGCCTAGAACACCTGCCTCGAGGTGTCTaGTTGCAGAGTCACACGGTTCAGGGTAAGGGGAGGTTTCACGTC +
Preference number: 1 (lower is better)
Translates to: RSCPSLCLEHLPRGV*LQSHTVQGKGRFHV
Trigger: GACGTGAAACCTCCCCTTACCCTGAACCGTGTGACTCTGCAAGCAGACACCTCGAGGCAGGTGTTCTAGGCAAAGGGATGGGCATGAGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR CCA 90 bp GGGCCCTTTGCCCAACCCTCACCCATGTTGACTTGTCCTGGCCAGTaGATCACAGCTTCCCTGGTTCTCATCTCTGTCACCCACAGGAAC +
Preference number: 1 (lower is better)
Translates to: GPFAQPSPMLTCPGQ*ITASLVLISVTHRN
Trigger: GTTCCTGTGGGTGACAGAGATGAGAACCAGGGAAGCTGTGATCCACTGGCCAGGACAAGTCAACATGGGTGAGGGTTGGGCAAAGGGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR CCA 90 bp GCTTCTGGGCTTTTATTCAAAACAACACTGGTGGTGGCTGCCGCTTaGTTTCTCTACACCCGGGCCATGGGCCAGCAGGTACCAGCGCCA +
Preference number: 1 (lower is better)
Translates to: ASGLLFKTTLVVAAA*FLYTRAMGQQVPAP
Trigger: TGGCGCTGGTACCTGCTGGCCCATGGCCCGGGTGTAGAGAAACCAAGCGGCAGCCACCACCAGTGTTGTTTTGAATAAAAGCCCAGAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR GCA 90 bp GGCAAGGTTATTGCTGAAGTACAGCATCTGCAAACTCGTGGCCCCTaGAGCCTCTCCAGATCACTGCCACCAACATGCTCCCAACCTCCT +
Preference number: 1 (lower is better)
Translates to: GKVIAEVQHLQTRGP*SLSRSLPPTCSQPP
Trigger: AGGAGGTTGGGAGCATGTTGGTGGCAGTGATCTGGAGAGGCTGCAGGGGCCACGAGTTTGCAGATGCTGTACTTCAGCAATAACCTTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR GCA 90 bp GTTCCCTGCTCAGCTGCTCTGAACCCATGTGACAACAGGAAAGGCTaGTCAGTGGAGTCGCAAGATGACCTGAGGCTGCTTGACTGGTGT +
Preference number: 1 (lower is better)
Translates to: VPCSAALNPCDNRKG*SVESQDDLRLLDWC
Trigger: ACACCAGTCAAGCAGCCTCAGGTCATCTTGCGACTCCACTGAGCAGCCTTTCCTGTTGTCACATGGGTTCAGAGCAGCTGAGCAGGGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR GCA 90 bp GAGGGGGTCTTAGCAAAGGCAAGGTTATTGCTGAAGTACAGCATCTaGAAACTCGTGGCCCCTGCAGCCTCTCCAGATCACTGCCACCAA +
Preference number: 1 (lower is better)
Translates to: EGVLAKARLLLKYSI*KLVAPAASPDHCHQ
Trigger: TTGGTGGCAGTGATCTGGAGAGGCTGCAGGGGCCACGAGTTTGCAGATGCTGTACTTCAGCAATAACCTTGCCTTTGCTAAGACCCCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR GCA 90 bp TCTTCTGGGCTCCAATACACGTGTCCCTCCAGCAACACGCGGACTTaGAAAAAGTCAAGTCTGTCTGCTTCCCTCCAACTGCGAGAGCTC +
Preference number: 1 (lower is better)
Translates to: SSGLQYTCPSSNTRT*KKSSLSASLQLREL
Trigger: GAGCTCTCGCAGTTGGAGGGAAGCAGACAGACTTGACTTTTTGCAAGTCCGCGTGTTGCTGGAGGGACACGTGTATTGGAGCCCAGAAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR TCA 90 bp TCTGGGGTGTCTACGAAAGACTTCACAATAACGAGACAGTCAGGATaGCAGGACAGACACCCCGACACGTGGGAGCCACGTGGGATCTTA +
Preference number: 1 (lower is better)
Translates to: SGVSTKDFTITRQSG*QDRHPDTWEPRGIL
Trigger: TAAGATCCCACGTGGCTCCCACGTGTCGGGGTGTCTGTCCTGTCATCCTGACTGTCTCGTTATTGTGAAGTCTTTCGTAGACACCCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR TCA 90 bp CAAGATGACCTGAGGCTGCTTGACTGGTGTCTGATCCTGTTAACTTaGAGCCCAACCTTCCACATGGTATTCCCAGGCCACACAGCCCCT +
Preference number: 1 (lower is better)
Translates to: QDDLRLLDWCLILLT*SPTFHMVFPGHTAP
Trigger: AGGGGCTGTGTGGCCTGGGAATACCATGTGGAAGGTTGGGCTTCAAGTTAACAGGATCAGACACCAGTCAAGCAGCCTCAGGTCATCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR CCA 90 bp CATATATATATATATATGTATGTATATGCACTGGAAGGGCCACCATaGGCCACGCAGGCCTGGCTAACCCAGACTCCGCTCAGCCCGGCT +
Preference number: 1 (lower is better)
Translates to: HIYIYMYVYALEGPP*ATQAWLTQTPLSPA
Trigger: AGCCGGGCTGAGCGGAGTCTGGGTTAGCCAGGCCTGCGTGGCCCATGGTGGCCCTTCCAGTGCATATACATACATATATATATATATATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR CCA 90 bp TTCTTAAATAGGCTTCTGGGCTTTTATTCAAAACAACACTGGTGGTaGCTGCCGCTTGGTTTCTCTACACCCGGGCCATGGGCCAGCAGG +
Preference number: 1 (lower is better)
Translates to: FLNRLLGFYSKQHWW*LPLGFSTPGPWASR
Trigger: CCTGCTGGCCCATGGCCCGGGTGTAGAGAAACCAAGCGGCAGCCACCACCAGTGTTGTTTTGAATAAAAGCCCAGAAGCCTATTTAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402142.4
3UTR GCA 90 bp ATATATATATATATATATGCATATATATATATATATGTATGTATATaGACTGGAAGGGCCACCATGGGCCACGCAGGCCTGGCTAACCCA +
Preference number: 1 (lower is better)
Translates to: IYIYIYAYIYIYVCI*TGRATMGHAGLANP
Trigger: TGGGTTAGCCAGGCCTGCGTGGCCCATGGTGGCCCTTCCAGTGCATATACATACATATATATATATATATGCATATATATATATATATAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR-3UTR GCA 90 bp GCCCCTCCAAGCAAGCCACTGCCGGCTCAGTCTCCCGCACCCTTCCTCTGCAGGGTGCCCTGCGGGCCCTaGGCGATCCCAGGTGTGGAC +
Preference number: 2 (lower is better)
Translates to: APPSKPLPAQSPAPFLCRVPCGP*AIPGVD
Trigger: GTCCACACCTGGGATCGCGCAGGGCCCGCAGGGCAC...CCTGCAGAGGAAGGGTGCGGGAGACTGAGCCGGCAGTGGCTTGCTTGGAGGGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR-3UTR CCA 90 bp GGCCGTCTCTGCACAGATGCCAAGGTGCCTGCCCACCACCGCTCTACGGAGCCCGAAGTGCTCAGGAGCTaGGGACCTCACCTGGGGCCA +
Preference number: 2 (lower is better)
Translates to: GRLCTDAKVPAHHRSTEPEVLRS*GPHLGP
Trigger: TGGCCCCAGGTGAGGTCCCCAGCTCCTGAGCACTTC...GGGCTCCGTAGAGCGGTGGTGGGCAGGCACCTTGGCATCTGTGCAGAGACGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR-3UTR GCA 90 bp GGCCGTCTCTGCACAGATGCCAAGGTGCCTGCCCACCACCGCTCTACGGAGCCCCCACCCCAGCTTCTTTaGTGCCAGGGCCCTGAAGCA +
Preference number: 2 (lower is better)
Translates to: GRLCTDAKVPAHHRSTEPPPQLL*CQGPEA
Trigger: TGCTTCAGGGCCCTGGCAGCAAAGAAGCTGGGGTGG...GGGCTCCGTAGAGCGGTGGTGGGCAGGCACCTTGGCATCTGTGCAGAGACGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR-3UTR GCA 90 bp GTGTCCTGCCCGCCAGAGCACACAGCCTGGTGTGACGGGTCAGACAGTCACCCACTCCATCCGCCCCAGTaGCACCTCCCCCTCCAGTCT +
Preference number: 2 (lower is better)
Translates to: VSCPPEHTAWCDGSDSHPLHPPQ*HLPLQS
Trigger: AGACTGGAGGGGGAGGTGGCACTGGGGCGGATGGAG...TGGGTGACTGTCTGACCCGTCACACCAGGCTGTGTGCTCTGGCGGGCAGGACAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000401624.5
3UTR-3UTR GCA 90 bp CACCCCCACAGCGGAGCCCTCAGTGCTTCAGACCTCTGTGTGCCCGTGGGTAGGCAGTACGGGGGACCCTaGAGCCCGAGGCTTCTCATC +
Preference number: 2 (lower is better)
Translates to: HPHSGALSASDLCVPVGRQYGGP*SPRLLI
Trigger: GATGAGAAGCCTCGGGCTGCAGGGTCCCCCGTACTG...CCTACCCACGGGCACACAGAGGTCTGAAGCACTGAGGGCTCCGCTGTGGGGGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000401624.5
3UTR-3UTR CCA 90 bp GCACAGATGCCAAGGTGCCTGCCCACCACCGCTCTACGGAGCCCAGCAGACAGCGAAGTGCTCAGGAGCTaGGGACCTCACCTGGGGCCA +
Preference number: 2 (lower is better)
Translates to: AQMPRCLPTTALRSPADSEVLRS*GPHLGP
Trigger: TGGCCCCAGGTGAGGTCCCCAGCTCCTGAGCACTTC...GCTGTCTGCTGGGCTCCGTAGAGCGGTGGTGGGCAGGCACCTTGGCATCTGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR CAA 90 bp CCTGCCCCCAGGGAGGACTGGGCAGTTCCTTCCGCCACAGGCACCTaGCTCAGCATCACAGCTCTAGGGTGTGGAGTAGGGCCCTCCACA +
Preference number: 2 (lower is better)
Translates to: PAPREDWAVPSATGT*LSITALGCGVGPST
Trigger: TGTGGAGGGCCCTACTCCACACCCTAGAGCTGTGATGCTGAGCAAGGTGCCTGTGGCGGAAGGAACTGCCCAGTCCTCCCTGGGGGCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR CAA 90 bp GGTGGTGCCCTCGGCCTTTGGTTGGGTCCTTCCCCTCCCAGTCCCTaGGACTTCCAGGCCTGGCTTAGATCCTGCCCCTTGCCCACAGAC +
Preference number: 2 (lower is better)
Translates to: GGALGLWLGPSPPSP*DFQAWLRSCPLPTD
Trigger: GTCTGTGGGCAAGGGGCAGGATCTAAGCCAGGCCTGGAAGTCCAAGGGACTGGGAGGGGAAGGACCCAACCAAAGGCCGAGGGCACCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401624.5
3UTR-3UTR GCA 90 bp CTCTCCTCCCCTCCCCTCAAGCTAGGGATCACAGGCCTCTTCCAGACCCGCCTTCCCCTTGCACGGTGGTaGCCTCGGCCTTTGGTTGGG +
Preference number: 2 (lower is better)
Translates to: LSSPPLKLGITGLFQTRLPLARW*PRPLVG
Trigger: CCCAACCAAAGGCCGAGGGCACCACCGTGCAAGGGG...AAGGCGGGTCTGGAAGAGGCCTGTGATCCCTAGCTTGAGGGGAGGGGAGGAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000401624.5
3UTR-3UTR CCA 90 bp GCACAGATGCCAAGGTGCCTGCCCACCACCGCTCTACGGAGCCCAGCAGACAGCACATGTGCCCTGGGGTaGGTCTGGCCAGAATCCCAG +
Preference number: 2 (lower is better)
Translates to: AQMPRCLPTTALRSPADSTCALG*VWPESQ
Trigger: CTGGGATTCTGGCCAGACCCACCCCAGGGCACATGT...GCTGTCTGCTGGGCTCCGTAGAGCGGTGGTGGGCAGGCACCTTGGCATCTGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR-3UTR CCA 90 bp GGCCGTCTCTGCACAGATGCCAAGGTGCCTGCCCACCACCGCTCTACGGAGCCCTGGGGTGGGAAGATGTaGCCTCCAGGTGACGCGAAA +
Preference number: 2 (lower is better)
Translates to: GRLCTDAKVPAHHRSTEPWGGKM*PPGDAK
Trigger: TTTCGCGTCACCTGGAGGCCACATCTTCCCACCCCA...GGGCTCCGTAGAGCGGTGGTGGGCAGGCACCTTGGCATCTGTGCAGAGACGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR-3UTR CCA 90 bp CCTAGTAATCAAGCCCCCACTCACACCCACCCAGAGCACCCAGGGTGTCCTCCCGGTGCCCTCGGCCTTTaGTTGGGTCCTTCCCCTCCC +
Preference number: 2 (lower is better)
Translates to: PSNQAPTHTHPEHPGCPPGALGL*LGPSPP
Trigger: GGGAGGGGAAGGACCCAACCAAAGGCCGAGGGCACC...GGGAGGACACCCTGGGTGCTCTGGGTGGGTGTGAGTGGGGGCTTGATTACTAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000401624.5
3UTR-3UTR TCA 90 bp GGCCGTCTCTGCACAGATGCCAAGGTGCCTGCCCACCACCGCTCTACGGAGCCCCCTGCTCAGCTGCTCTaGACCCATGTGACAACAGGA +
Preference number: 2 (lower is better)
Translates to: GRLCTDAKVPAHHRSTEPPAQLL*THVTTG
Trigger: TCCTGTTGTCACATGGGTTCAGAGCAGCTGAGCAGG...GGGCTCCGTAGAGCGGTGGTGGGCAGGCACCTTGGCATCTGTGCAGAGACGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR-3UTR GCA 90 bp GGCCGTCTCTGCACAGATGCCAAGGTGCCTGCCCACCACCGCTCTACGGAGCCCGAAGGAAGGGCCCTTTaGCCAACCCTCACCCATGTT +
Preference number: 2 (lower is better)
Translates to: GRLCTDAKVPAHHRSTEPEGRAL*PTLTHV
Trigger: AACATGGGTGAGGGTTGGGCAAAGGGCCCTTCCTTC...GGGCTCCGTAGAGCGGTGGTGGGCAGGCACCTTGGCATCTGTGCAGAGACGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR-3UTR GCA 90 bp AGTTTGTGTCCTGCCCGCCAGAGCACACAGCCTGGTGTGACGGGTCAGACAGTCGTTCCCAAACCCCCTTaGACGGTGGTGCCCTCGGCC +
Preference number: 2 (lower is better)
Translates to: SLCPARQSTQPGVTGQTVVPKPP*TVVPSA
Trigger: GGCCGAGGGCACCACCGTGCAAGGGGGTTTGGGAAC...GACTGTCTGACCCGTCACACCAGGCTGTGTGCTCTGGCGGGCAGGACACAAACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000401624.5
3UTR-3UTR GCA 90 bp GTGTCCTGCCCGCCAGAGCACACAGCCTGGTGTGACGGGTCAGACAGTCACCCACTTCAGACCTCTGTGTaGCCGTGGGTAGGAGGGCTG +
Preference number: 2 (lower is better)
Translates to: VSCPPEHTAWCDGSDSHPLQTSV*PWVGGL
Trigger: CAGCCCTCCTACCCACGGGCACACAGAGGTCTGAAG...TGGGTGACTGTCTGACCCGTCACACCAGGCTGTGTGCTCTGGCGGGCAGGACAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401624.5
3UTR-3UTR GCA 90 bp CCAGTGAATCAACTGCACTCACTGTGGGAGCCGGCCCGGCCCCATTTCCCCACCCAGCGGAGCCCTCAGTaGTTCAGACCTCTGTGTGCC +
Preference number: 2 (lower is better)
Translates to: PVNQLHSLWEPARPHFPTQRSPQ*FRPLCA
Trigger: GGCACACAGAGGTCTGAAGCACTGAGGGCTCCGCTG...GGTGGGGAAATGGGGCCGGGCCGGCTCCCACAGTGAGTGCAGTTGATTCACTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401624.5
3UTR-3UTR CCA 90 bp GGGGACAGCACAGTGTCCAGGAACAGCCACAGCTCAGCGCCCATATGGGGGATACTGGAAGGGCCACCATaGGCCACGCAGGCCTGGCTA +
Preference number: 2 (lower is better)
Translates to: GDSTVSRNSHSSAPIWGILEGPP*ATQAWL
Trigger: TAGCCAGGCCTGCGTGGCCCATGGTGGCCCTTCCAG...TATCCCCCATATGGGCGCTGAGCTGTGGCTGTTCCTGGACACTGTGCTGTCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR-3UTR GCA 90 bp GCCCCTCCAAGCAAGCCACTGCCGGCTCAGTCTCCCGCACCCTTCCTCTGCAGGGTGTGGACGAAGTATTaGTGTCTGCTCCTGGCTCCT +
Preference number: 2 (lower is better)
Translates to: APPSKPLPAQSPAPFLCRVWTKY*CLLLAP
Trigger: AGGAGCCAGGAGCAGACAGCAATACTTCGTCCACAC...CCTGCAGAGGAAGGGTGCGGGAGACTGAGCCGGCAGTGGCTTGCTTGGAGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR-3UTR GCA 90 bp GCCATGGGCCAGCAGGTACCAGCGCCATCAGCAACTAGGAGGGAAGTTCATTCACCCCACAGGTCTACCTaGCCCCAGGGAGGACTGGGC +
Preference number: 2 (lower is better)
Translates to: AMGQQVPAPSATRREVHSPHRST*PQGGLG
Trigger: GCCCAGTCCTCCCTGGGGGCAGGTAGACCTGTGGGG...TGAATGAACTTCCCTCCTAGTTGCTGATGGCGCTGGTACCTGCTGGCCCATGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR-3UTR GCA 90 bp GCAGGGAGTTTGTGTCCTGCCCGCCAGAGCACACAGCCTGGTGTGACGGGTCAGAGCACCCCGCCACCCTaGAAAACCTCCAGTACTCCT +
Preference number: 2 (lower is better)
Translates to: AGSLCPARQSTQPGVTGQSTPPP*KTSSTP
Trigger: AGGAGTACTGGAGGTTTTGCAGGGTGGCGGGGTGCT...CTGACCCGTCACACCAGGCTGTGTGCTCTGGCGGGCAGGACACAAACTCCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401624.5
3UTR-3UTR CCA 90 bp GCACAGATGCCAAGGTGCCTGCCCACCACCGCTCTACGGAGCCCAGCAGACAGCGCGCGATCCCAGGTGTaGACGAAGTATTGCTGTCTG +
Preference number: 2 (lower is better)
Translates to: AQMPRCLPTTALRSPADSARSQV*TKYCCL
Trigger: CAGACAGCAATACTTCGTCCACACCTGGGATCGCGC...GCTGTCTGCTGGGCTCCGTAGAGCGGTGGTGGGCAGGCACCTTGGCATCTGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR-3UTR CCA 90 bp GGTCAGAGCTGCTTTGCCTTGAACCTACTGGGGCGGGGGCATAGTTGCTCAGGATGGGCCACGCAGGCCTaGCTAACCCAGACTCCGCTC +
Preference number: 2 (lower is better)
Translates to: GQSCFALNLLGRGHSCSGWATQA*LTQTPL
Trigger: GAGCGGAGTCTGGGTTAGCCAGGCCTGCGTGGCCCA...TCCTGAGCAACTATGCCCCCGCCCCAGTAGGTTCAAGGCAAAGCAGCTCTGACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR-3UTR CCA 90 bp AGTACAGCATCTGCAAACTCGTGGCCCCTGCAGCCTCTCCAGATCACTGCCACCTGGGCCACGCAGGCCTaGCTAACCCAGACTCCGCTC +
Preference number: 2 (lower is better)
Translates to: STASANSWPLQPLQITATWATQA*LTQTPL
Trigger: GAGCGGAGTCTGGGTTAGCCAGGCCTGCGTGGCCCA...GGTGGCAGTGATCTGGAGAGGCTGCAGGGGCCACGAGTTTGCAGATGCTGTACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR-3UTR CCA 90 bp GAGGCTCTCTGGAGCGGGCAGTGTTGGGCTTGGACCGAGCCATCCCCACAGGTCCACGTGGGAGCCACGTaGGATCTTAGCAGCGTTTCT +
Preference number: 2 (lower is better)
Translates to: EALWSGQCWAWTEPSPQVHVGAT*DLSSVS
Trigger: AGAAACGCTGCTAAGATCCCACGTGGCTCCCACGTG...GACCTGTGGGGATGGCTCGGTCCAAGCCCAACACTGCCCGCTCCAGAGAGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR-3UTR CCA 90 bp GAATTCGGTCAGAGCTGCTTTGCCTTGAACCTACTGGGGCGGGGGCATAGTTGCCACCTGCAGGGCAGCTaGAGCCAGCCGAGACCAGGC +
Preference number: 2 (lower is better)
Translates to: EFGQSCFALNLLGRGHSCHLQGS*SQPRPG
Trigger: GCCTGGTCTCGGCTGGCTCCAGCTGCCCTGCAGGTG...GCAACTATGCCCCCGCCCCAGTAGGTTCAAGGCAAAGCAGCTCTGACCGAATTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR-3UTR CCA 90 bp TGGACCCTGGAGCCTTCGCTCATGCCCATCCCTTTGCCTAGAACACCTGCCTCGACAGGGGCTGGCAGGTaGGGTGGGAAGATGTGGCCT +
Preference number: 2 (lower is better)
Translates to: WTLEPSLMPIPLPRTPASTGAGR*GGKMWP
Trigger: AGGCCACATCTTCCCACCCCACCTGCCAGCCCCTGT...CGAGGCAGGTGTTCTAGGCAAAGGGATGGGCATGAGCGAAGGCTCCAGGGTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR-3UTR CCA 90 bp GAGTTTGTGTCCTGCCCGCCAGAGCACACAGCCTGGTGTGACGGGTCAGACAGTCCCTCGGCCTTTGGTTaGGTCCTTCCCCTCCCAGTC +
Preference number: 2 (lower is better)
Translates to: EFVSCPPEHTAWCDGSDSPSAFG*VLPLPV
Trigger: GACTGGGAGGGGAAGGACCCAACCAAAGGCCGAGGG...ACTGTCTGACCCGTCACACCAGGCTGTGTGCTCTGGCGGGCAGGACACAAACTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401624.5
3UTR-3UTR TCA 90 bp CCACCCCTGCCTAGAATTCGGTCAGAGCTGCTTTGCCTTGAACCTACTGGGGCGGTGCCCTCAGAGGCCTaGGGGTCCTCTCCAAGCTAC +
Preference number: 2 (lower is better)
Translates to: PPLPRIRSELLCLEPTGAVPSEA*GSSPSY
Trigger: GTAGCTTGGAGAGGACCCTCAGGCCTCTGAGGGCAC...CGCCCCAGTAGGTTCAAGGCAAAGCAGCTCTGACCGAATTCTAGGCAGGGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR-3UTR GCA 90 bp CCACCCCTGCCTAGAATTCGGTCAGAGCTGCTTTGCCTTGAACCTACTGGGGCGTTCTCCAGGGCCTGGTaGCCTCAGAGGCCTGAGGGT +
Preference number: 2 (lower is better)
Translates to: PPLPRIRSELLCLEPTGAFSRAW*PQRPEG
Trigger: ACCCTCAGGCCTCTGAGGGCACCAGGCCCTGGAGAA...CGCCCCAGTAGGTTCAAGGCAAAGCAGCTCTGACCGAATTCTAGGCAGGGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR-3UTR GCA 90 bp CCACCCCTGCCTAGAATTCGGTCAGAGCTGCTTTGCCTTGAACCTACTGGGGCGCTCCAAGCAAGCCACTaGCGGCTCAGTCTCCCGCAC +
Preference number: 2 (lower is better)
Translates to: PPLPRIRSELLCLEPTGALQASH*RLSLPH
Trigger: GTGCGGGAGACTGAGCCGGCAGTGGCTTGCTTGGAG...CGCCCCAGTAGGTTCAAGGCAAAGCAGCTCTGACCGAATTCTAGGCAGGGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR-3UTR GCA 90 bp GCACAGATGCCAAGGTGCCTGCCCACCACCGCTCTACGGAGCCCAGCAGACAGCCTGAAGTACAGCATCTaGAAACTCGTGGCCCCTGCA +
Preference number: 2 (lower is better)
Translates to: AQMPRCLPTTALRSPADSLKYSI*KLVAPA
Trigger: TGCAGGGGCCACGAGTTTGCAGATGCTGTACTTCAG...GCTGTCTGCTGGGCTCCGTAGAGCGGTGGTGGGCAGGCACCTTGGCATCTGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR-3UTR GCA 90 bp AGTCACCCAGTGAATCAACTGCACTCACTGTGGGAGCCGGCCCGGCCCCATTTCGCCTGGCTTAGATCCTaGCCCTTGCCCACAGACCAG +
Preference number: 2 (lower is better)
Translates to: SHPVNQLHSLWEPARPHFAWLRS*PLPTDQ
Trigger: CTGGTCTGTGGGCAAGGGGCAGGATCTAAGCCAGGC...GAAATGGGGCCGGGCCGGCTCCCACAGTGAGTGCAGTTGATTCACTGGGTGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401624.5
3UTR-3UTR CCA 90 bp GGCCGTCTCTGCACAGATGCCAAGGTGCCTGCCCACCACCGCTCTACGGAGCCCTGTATGTATATGCACTaGAAGGGCCACCATGGGCCA +
Preference number: 2 (lower is better)
Translates to: GRLCTDAKVPAHHRSTEPCMYMH*KGHHGP
Trigger: TGGCCCATGGTGGCCCTTCCAGTGCATATACATACA...GGGCTCCGTAGAGCGGTGGTGGGCAGGCACCTTGGCATCTGTGCAGAGACGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR-3UTR CCA 90 bp GCCATGGGCCAGCAGGTACCAGCGCCATCAGCAACTAGGAGGGAAGTTCATTCAGCGAAAGGCTGGGCATaGGGATGCGGCTGGACCCAG +
Preference number: 2 (lower is better)
Translates to: AMGQQVPAPSATRREVHSAKGWA*GCGWTQ
Trigger: CTGGGTCCAGCCGCATCCCCATGCCCAGCCTTTCGC...TGAATGAACTTCCCTCCTAGTTGCTGATGGCGCTGGTACCTGCTGGCCCATGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR-3UTR CCA 90 bp GCCATGGGCCAGCAGGTACCAGCGCCATCAGCAACTAGGAGGGAAGTTCATTCAGGTGACGCGAAAGGCTaGGCATGGGGATGCGGCTGG +
Preference number: 2 (lower is better)
Translates to: AMGQQVPAPSATRREVHSGDAKG*AWGCGW
Trigger: CCAGCCGCATCCCCATGCCCAGCCTTTCGCGTCACC...TGAATGAACTTCCCTCCTAGTTGCTGATGGCGCTGGTACCTGCTGGCCCATGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR CAA 90 bp CTCCCTGCTCTGTGGACCCTGGAGCCTTCGCTCATGCCCATCCCTTaGCCTAGAACACCTGCCTCGAGGTGTCTGCTTGCAGAGTCACAC +
Preference number: 2 (lower is better)
Translates to: LPALWTLEPSLMPIP*PRTPASRCLLAESH
Trigger: GTGTGACTCTGCAAGCAGACACCTCGAGGCAGGTGTTCTAGGCAAAGGGATGGGCATGAGCGAAGGCTCCAGGGTCCACAGAGCAGGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR-3UTR TCA 90 bp TTGCAAAAAGTCAAGTCTGTCTGCTTCCCTCCAACTGCGAGAGCTCAGGGTCAGTTTCCCGGGTGGGCTTaGCAACCCCTCCCGGCCCCC +
Preference number: 2 (lower is better)
Translates to: LQKVKSVCFPPTARAQGQFPGWA*QPLPAP
Trigger: GGGGGCCGGGAGGGGTTGTCAAGCCCACCCGGGAAA...CTGACCCTGAGCTCTCGCAGTTGGAGGGAAGCAGACAGACTTGACTTTTTGCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR-3UTR GCA 90 bp GCCATGGGCCAGCAGGTACCAGCGCCATCAGCAACTAGGAGGGAAGTTCATTCACCACCCCCTCAGAAGTaGTCAGGAGCTGGGGACCTC +
Preference number: 2 (lower is better)
Translates to: AMGQQVPAPSATRREVHSPPPQK*SGAGDL
Trigger: GAGGTCCCCAGCTCCTGAGCACTTCTGAGGGGGTGG...TGAATGAACTTCCCTCCTAGTTGCTGATGGCGCTGGTACCTGCTGGCCCATGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR-3UTR CCA 90 bp TGTCCTGGCCAGTGGATCACAGCTTCCCTGGTTCTCATCTCTGTCACCCACAGGGCCCTGGGGTGGGTCTaGCCAGAATCCCAGAGCATC +
Preference number: 2 (lower is better)
Translates to: CPGQWITASLVLISVTHRALGWV*PESQSI
Trigger: GATGCTCTGGGATTCTGGCCAGACCCACCCCAGGGC...CCTGTGGGTGACAGAGATGAGAACCAGGGAAGCTGTGATCCACTGGCCAGGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR-3UTR CCA 90 bp CTGCCTCGAGGTGTCTGCTTGCAGAGTCACACGGTTCAGGGTAAGGGGAGGTTTGGCCCTGAAGCATCCTaGGCTGGCTGCTTCCCCTCT +
Preference number: 2 (lower is better)
Translates to: LPRGVCLQSHTVQGKGRFGPEAS*AGCFPS
Trigger: AGAGGGGAAGCAGCCAGCCCAGGATGCTTCAGGGCC...AAACCTCCCCTTACCCTGAACCGTGTGACTCTGCAAGCAGACACCTCGAGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR-3UTR CCA 90 bp TCACCCAGTGAATCAACTGCACTCACTGTGGGAGCCGGCCCGGCCCCATTTCCCTTGGACTTCCAGGCCTaGCTTAGATCCTGCCCCTTG +
Preference number: 2 (lower is better)
Translates to: SPSESTALTVGAGPAPFPLDFQA*LRSCPL
Trigger: CAAGGGGCAGGATCTAAGCCAGGCCTGGAAGTCCAA...GGGAAATGGGGCCGGGCCGGCTCCCACAGTGAGTGCAGTTGATTCACTGGGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401624.5
3UTR CAA 90 bp GGCTTCTGGGCTTTTATTCAAAACAACACTGGTGGTGGCTGCCGCTaGGTTTCTCTACACCCGGGCCATGGGCCAGCAGGTACCAGCGCC +
Preference number: 2 (lower is better)
Translates to: GFWAFIQNNTGGGCR*VSLHPGHGPAGTSA
Trigger: GGCGCTGGTACCTGCTGGCCCATGGCCCGGGTGTAGAGAAACCAAGCGGCAGCCACCACCAGTGTTGTTTTGAATAAAAGCCCAGAAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR-3UTR TCA 90 bp CTTGTCCTGGCCAGTGGATCACAGCTTCCCTGGTTCTCATCTCTGTCACCCACAGTGCCCTCAGAGGCCTaGGGGTCCTCTCCAAGCTAC +
Preference number: 2 (lower is better)
Translates to: LVLASGSQLPWFSSLSPTVPSEA*GSSPSY
Trigger: GTAGCTTGGAGAGGACCCTCAGGCCTCTGAGGGCAC...TGTGGGTGACAGAGATGAGAACCAGGGAAGCTGTGATCCACTGGCCAGGACAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR-3UTR GCA 90 bp CTGCCTCGAGGTGTCTGCTTGCAGAGTCACACGGTTCAGGGTAAGGGGAGGTTTGCTCAGCCTTGGAGCTaGTCTCCATCCCCTACCCCA +
Preference number: 2 (lower is better)
Translates to: LPRGVCLQSHTVQGKGRFAQPWS*SPSPTP
Trigger: TGGGGTAGGGGATGGAGAGCAGCTCCAAGGCTGAGC...AAACCTCCCCTTACCCTGAACCGTGTGACTCTGCAAGCAGACACCTCGAGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR-3UTR GCA 90 bp CTTGTCCTGGCCAGTGGATCACAGCTTCCCTGGTTCTCATCTCTGTCACCCACACCTTCCTCTGCAGGCTaGCTCCACTCCTGCTCCACC +
Preference number: 2 (lower is better)
Translates to: LVLASGSQLPWFSSLSPTPSSAG*LHSCST
Trigger: GGTGGAGCAGGAGTGGAGGCAGCCTGCAGAGGAAGG...TGTGGGTGACAGAGATGAGAACCAGGGAAGCTGTGATCCACTGGCCAGGACAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR-3UTR CCA 90 bp CAGCACAGTGTCCAGGAACAGCCACAGCTCAGCGCCCATATGGGGGATAAAAGGACATGTGCCCTGGGGTaGGTCTGGCCAGAATCCCAG +
Preference number: 2 (lower is better)
Translates to: QHSVQEQPQLSAHMGDKRTCALG*VWPESQ
Trigger: CTGGGATTCTGGCCAGACCCACCCCAGGGCACATGT...CCTTTTATCCCCCATATGGGCGCTGAGCTGTGGCTGTTCCTGGACACTGTGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR-3UTR CCA 90 bp TGTCCTGGCCAGTGGATCACAGCTTCCCTGGTTCTCATCTCTGTCACCCACAGGGCAGGACATGTGCCCTaGGGTGGGTCTGGCCAGAAT +
Preference number: 2 (lower is better)
Translates to: CPGQWITASLVLISVTHRAGHVP*GGSGQN
Trigger: ATTCTGGCCAGACCCACCCCAGGGCACATGTCCTGC...CCTGTGGGTGACAGAGATGAGAACCAGGGAAGCTGTGATCCACTGGCCAGGACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR-3UTR CCA 90 bp GCACAGATGCCAAGGTGCCTGCCCACCACCGCTCTACGGAGCCCAGCAGACAGCAGCTCAGCGCCCATATaGGGGATAAAAGGCATTAGT +
Preference number: 2 (lower is better)
Translates to: AQMPRCLPTTALRSPADSSSAPI*GIKGIS
Trigger: ACTAATGCCTTTTATCCCCCATATGGGCGCTGAGCT...GCTGTCTGCTGGGCTCCGTAGAGCGGTGGTGGGCAGGCACCTTGGCATCTGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR-3UTR CCA 90 bp CTGCCTCGAGGTGTCTGCTTGCAGAGTCACACGGTTCAGGGTAAGGGGAGGTTTCACAGCTCTAGGGTGTaGAGTAGGGCCCTCCACACC +
Preference number: 2 (lower is better)
Translates to: LPRGVCLQSHTVQGKGRFHSSRV*SRALHT
Trigger: GGTGTGGAGGGCCCTACTCCACACCCTAGAGCTGTG...AAACCTCCCCTTACCCTGAACCGTGTGACTCTGCAAGCAGACACCTCGAGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR-3UTR CCA 90 bp CTTGTCCTGGCCAGTGGATCACAGCTTCCCTGGTTCTCATCTCTGTCACCCACAGGGCAGTGTTGGGCTTaGACCGAGCCATCCCCACAG +
Preference number: 2 (lower is better)
Translates to: LVLASGSQLPWFSSLSPTGQCWA*TEPSPQ
Trigger: CTGTGGGGATGGCTCGGTCCAAGCCCAACACTGCCC...TGTGGGTGACAGAGATGAGAACCAGGGAAGCTGTGATCCACTGGCCAGGACAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR-3UTR CCA 90 bp AAAGTCAAGTCTGTCTGCTTCCCTCCAACTGCGAGAGCTCAGGGTCAGCCAGGATGGAGCGGGCAGTGTTaGGCTTGGACCGAGCCATCC +
Preference number: 2 (lower is better)
Translates to: KVKSVCFPPTARAQGQPGWSGQC*AWTEPS
Trigger: GGATGGCTCGGTCCAAGCCCAACACTGCCCGCTCCA...TCCTGGCTGACCCTGAGCTCTCGCAGTTGGAGGGAAGCAGACAGACTTGACTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR CAA 90 bp GGGGAGGAAGGAAGGGCCCTTTGCCCAACCCTCACCCATGTTGACTaGTCCTGGCCAGTGGATCACAGCTTCCCTGGTTCTCATCTCTGT +
Preference number: 2 (lower is better)
Translates to: GEEGRALCPTLTHVD*SWPVDHSFPGSHLC
Trigger: ACAGAGATGAGAACCAGGGAAGCTGTGATCCACTGGCCAGGACAAGTCAACATGGGTGAGGGTTGGGCAAAGGGCCCTTCCTTCCTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR-3UTR TCA 90 bp AGTACAGCATCTGCAAACTCGTGGCCCCTGCAGCCTCTCCAGATCACTGCCACCTCTGCTCCTGGCTCCTaGGGTAAAGAAGGTGAGACG +
Preference number: 2 (lower is better)
Translates to: STASANSWPLQPLQITATSAPGS*GKEGET
Trigger: CGTCTCACCTTCTTTACCTCAGGAGCCAGGAGCAGA...GGTGGCAGTGATCTGGAGAGGCTGCAGGGGCCACGAGTTTGCAGATGCTGTACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR-3UTR TCA 90 bp TGTCCTGGCCAGTGGATCACAGCTTCCCTGGTTCTCATCTCTGTCACCCACAGGGAACAACTAACTACCTaGGCCCAGGGGCACCTGCAG +
Preference number: 2 (lower is better)
Translates to: CPGQWITASLVLISVTHREQLTT*AQGHLQ
Trigger: CTGCAGGTGCCCCTGGGCTCAGGTAGTTAGTTGTTC...CCTGTGGGTGACAGAGATGAGAACCAGGGAAGCTGTGATCCACTGGCCAGGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR-3UTR TCA 90 bp GAATTCGGTCAGAGCTGCTTTGCCTTGAACCTACTGGGGCGGGGGCATAGTTGCGAACAACTAACTACCTaGGCCCAGGGGCACCTGCAG +
Preference number: 2 (lower is better)
Translates to: EFGQSCFALNLLGRGHSCEQLTT*AQGHLQ
Trigger: CTGCAGGTGCCCCTGGGCTCAGGTAGTTAGTTGTTC...GCAACTATGCCCCCGCCCCAGTAGGTTCAAGGCAAAGCAGCTCTGACCGAATTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR-3UTR GCA 90 bp CTTGTCCTGGCCAGTGGATCACAGCTTCCCTGGTTCTCATCTCTGTCACCCACAGCTCAGCCTTGGAGCTaGTCTCCATCCCCTACCCCA +
Preference number: 2 (lower is better)
Translates to: LVLASGSQLPWFSSLSPTAQPWS*SPSPTP
Trigger: TGGGGTAGGGGATGGAGAGCAGCTCCAAGGCTGAGC...TGTGGGTGACAGAGATGAGAACCAGGGAAGCTGTGATCCACTGGCCAGGACAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR-3UTR GCA 90 bp CTTGTCCTGGCCAGTGGATCACAGCTTCCCTGGTTCTCATCTCTGTCACCCACAAGGTGCCCCCACCCCTaGCTAGAATTCGGTCAGAGC +
Preference number: 2 (lower is better)
Translates to: LVLASGSQLPWFSSLSPTRCPHP*LEFGQS
Trigger: GCTCTGACCGAATTCTAGGCAGGGGTGGGGGCACCT...TGTGGGTGACAGAGATGAGAACCAGGGAAGCTGTGATCCACTGGCCAGGACAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR-3UTR CCA 90 bp CCACCCCTGCCTAGAATTCGGTCAGAGCTGCTTTGCCTTGAACCTACTGGGGCGCACGTGGGAGCCACGTaGGATCTTAGCAGCGTTTCT +
Preference number: 2 (lower is better)
Translates to: PPLPRIRSELLCLEPTGAHVGAT*DLSSVS
Trigger: AGAAACGCTGCTAAGATCCCACGTGGCTCCCACGTG...CGCCCCAGTAGGTTCAAGGCAAAGCAGCTCTGACCGAATTCTAGGCAGGGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR-3UTR CCA 90 bp GAATTCGGTCAGAGCTGCTTTGCCTTGAACCTACTGGGGCGGGGGCATAGTTGCAGACACCCCGACACGTaGGAGCCACGTGGGATCTTA +
Preference number: 2 (lower is better)
Translates to: EFGQSCFALNLLGRGHSCRHPDT*EPRGIL
Trigger: TAAGATCCCACGTGGCTCCCACGTGTCGGGGTGTCT...GCAACTATGCCCCCGCCCCAGTAGGTTCAAGGCAAAGCAGCTCTGACCGAATTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR-3UTR TCA 90 bp AAAGTCAAGTCTGTCTGCTTCCCTCCAACTGCGAGAGCTCAGGGTCAGCCAGGAACGAGACAGTCAGGATaGCAGGACAGACACCCCGAC +
Preference number: 2 (lower is better)
Translates to: KVKSVCFPPTARAQGQPGTRQSG*QDRHPD
Trigger: GTCGGGGTGTCTGTCCTGTCATCCTGACTGTCTCGT...TCCTGGCTGACCCTGAGCTCTCGCAGTTGGAGGGAAGCAGACAGACTTGACTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR-3UTR TCA 90 bp GCCATGGGCCAGCAGGTACCAGCGCCATCAGCAACTAGGAGGGAAGTTCATTCACCTGCTCAGCTGCTCTaGACCCATGTGACAACAGGA +
Preference number: 2 (lower is better)
Translates to: AMGQQVPAPSATRREVHSPAQLL*THVTTG
Trigger: TCCTGTTGTCACATGGGTTCAGAGCAGCTGAGCAGG...TGAATGAACTTCCCTCCTAGTTGCTGATGGCGCTGGTACCTGCTGGCCCATGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR-3UTR GCA 90 bp GGTCAGAGCTGCTTTGCCTTGAACCTACTGGGGCGGGGGCATAGTTGCTCAGGAGTGTGGACGAAGTATTaGTGTCTGCTCCTGGCTCCT +
Preference number: 2 (lower is better)
Translates to: GQSCFALNLLGRGHSCSGVWTKY*CLLLAP
Trigger: AGGAGCCAGGAGCAGACAGCAATACTTCGTCCACAC...TCCTGAGCAACTATGCCCCCGCCCCAGTAGGTTCAAGGCAAAGCAGCTCTGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR-3UTR GCA 90 bp CAACTAGGAGGGAAGTTCATTCACACCATAGAAACTGTACAGCGACTGAGAGTGGTGCCCTGCGGGCCCTaGGCGATCCCAGGTGTGGAC +
Preference number: 2 (lower is better)
Translates to: QLGGKFIHTIETVQRLRVVPCGP*AIPGVD
Trigger: GTCCACACCTGGGATCGCGCAGGGCCCGCAGGGCAC...CACTCTCAGTCGCTGTACAGTTTCTATGGTGTGAATGAACTTCCCTCCTAGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR-3UTR GCA 90 bp TGGACCCTGGAGCCTTCGCTCATGCCCATCCCTTTGCCTAGAACACCTGCCTCGCTAAGGGGATGTGTGTaGTCTGGGGTGTCTACGAAA +
Preference number: 2 (lower is better)
Translates to: WTLEPSLMPIPLPRTPASLRGCV*SGVSTK
Trigger: TTTCGTAGACACCCCAGAGCACACACATCCCCTTAG...CGAGGCAGGTGTTCTAGGCAAAGGGATGGGCATGAGCGAAGGCTCCAGGGTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR-3UTR GCA 90 bp TTGCAAAAAGTCAAGTCTGTCTGCTTCCCTCCAACTGCGAGAGCTCAGGGTCAGCCTTCCTCTGCAGGCTaGCTCCACTCCTGCTCCACC +
Preference number: 2 (lower is better)
Translates to: LQKVKSVCFPPTARAQGQPSSAG*LHSCST
Trigger: GGTGGAGCAGGAGTGGAGGCAGCCTGCAGAGGAAGG...CTGACCCTGAGCTCTCGCAGTTGGAGGGAAGCAGACAGACTTGACTTTTTGCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR-3UTR GCA 90 bp CTTGTCCTGGCCAGTGGATCACAGCTTCCCTGGTTCTCATCTCTGTCACCCACACAAACTCGTGGCCCCTaGAGCCTCTCCAGATCACTG +
Preference number: 2 (lower is better)
Translates to: LVLASGSQLPWFSSLSPTQTRGP*SLSRSL
Trigger: CAGTGATCTGGAGAGGCTGCAGGGGCCACGAGTTTG...TGTGGGTGACAGAGATGAGAACCAGGGAAGCTGTGATCCACTGGCCAGGACAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR-3UTR GCA 90 bp TGTCCTGGCCAGTGGATCACAGCTTCCCTGGTTCTCATCTCTGTCACCCACAGGCTGCCTCGAGGTGTCTaGTTGCAGAGTCACACGGTT +
Preference number: 2 (lower is better)
Translates to: CPGQWITASLVLISVTHRLPRGV*LQSHTV
Trigger: AACCGTGTGACTCTGCAAGCAGACACCTCGAGGCAG...CCTGTGGGTGACAGAGATGAGAACCAGGGAAGCTGTGATCCACTGGCCAGGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR-3UTR CCA 90 bp TGTCCTGGCCAGTGGATCACAGCTTCCCTGGTTCTCATCTCTGTCACCCACAGGGCGCGATCCCAGGTGTaGACGAAGTATTGCTGTCTG +
Preference number: 2 (lower is better)
Translates to: CPGQWITASLVLISVTHRARSQV*TKYCCL
Trigger: CAGACAGCAATACTTCGTCCACACCTGGGATCGCGC...CCTGTGGGTGACAGAGATGAGAACCAGGGAAGCTGTGATCCACTGGCCAGGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR-3UTR CCA 90 bp AAAGTCAAGTCTGTCTGCTTCCCTCCAACTGCGAGAGCTCAGGGTCAGCCAGGAAGACACCCCGACACGTaGGAGCCACGTGGGATCTTA +
Preference number: 2 (lower is better)
Translates to: KVKSVCFPPTARAQGQPGRHPDT*EPRGIL
Trigger: TAAGATCCCACGTGGCTCCCACGTGTCGGGGTGTCT...TCCTGGCTGACCCTGAGCTCTCGCAGTTGGAGGGAAGCAGACAGACTTGACTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR-3UTR CCA 90 bp GGGGACAGCACAGTGTCCAGGAACAGCCACAGCTCAGCGCCCATATGGGGGATAGAGACATCTAACCGGTaGACTAAGGGGATGTGTGTG +
Preference number: 2 (lower is better)
Translates to: GDSTVSRNSHSSAPIWGIETSNR*TKGMCV
Trigger: CACACACATCCCCTTAGTCCACCGGTTAGATGTCTC...TATCCCCCATATGGGCGCTGAGCTGTGGCTGTTCCTGGACACTGTGCTGTCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR CAA 90 bp TCATGCCCATCCCTTTGCCTAGAACACCTGCCTCGAGGTGTCTGCTaGCAGAGTCACACGGTTCAGGGTAAGGGGAGGTTTCACGTCAGA +
Preference number: 2 (lower is better)
Translates to: SCPSLCLEHLPRGVC*QSHTVQGKGRFHVR
Trigger: TCTGACGTGAAACCTCCCCTTACCCTGAACCGTGTGACTCTGCAAGCAGACACCTCGAGGCAGGTGTTCTAGGCAAAGGGATGGGCATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR-3UTR GCA 90 bp CAAACACCCAAGTCTAGAACCCGTTTGGGAAGCACTGCTATAGTGAAAGCTGAGGGGCGGGGGCATAGTTaGTCAGGACGGGGACAGCAC +
Preference number: 2 (lower is better)
Translates to: QTPKSRTRLGSTAIVKAEGRGHS*SGRGQH
Trigger: GTGCTGTCCCCGTCCTGAGCAACTATGCCCCCGCCC...CTCAGCTTTCACTATAGCAGTGCTTCCCAAACGGGTTCTAGACTTGGGTGTTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR-3UTR GCA 90 bp TTGCAAAAAGTCAAGTCTGTCTGCTTCCCTCCAACTGCGAGAGCTCAGGGTCAGAGGTGCCCCCACCCCTaGCTAGAATTCGGTCAGAGC +
Preference number: 2 (lower is better)
Translates to: LQKVKSVCFPPTARAQGQRCPHP*LEFGQS
Trigger: GCTCTGACCGAATTCTAGGCAGGGGTGGGGGCACCT...CTGACCCTGAGCTCTCGCAGTTGGAGGGAAGCAGACAGACTTGACTTTTTGCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR-3UTR GCA 90 bp GCCATGGGCCAGCAGGTACCAGCGCCATCAGCAACTAGGAGGGAAGTTCATTCATGGAGCCTTCGCTCATaGCCATCCCTTTGCCTAGAA +
Preference number: 2 (lower is better)
Translates to: AMGQQVPAPSATRREVHSWSLRS*PSLCLE
Trigger: TTCTAGGCAAAGGGATGGGCATGAGCGAAGGCTCCA...TGAATGAACTTCCCTCCTAGTTGCTGATGGCGCTGGTACCTGCTGGCCCATGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR-3UTR CCA 90 bp GGTCAGAGCTGCTTTGCCTTGAACCTACTGGGGCGGGGGCATAGTTGCTCAGGAGGGATGTGTGTGCTCTaGGGTGTCTACGAAAGACTT +
Preference number: 2 (lower is better)
Translates to: GQSCFALNLLGRGHSCSGGMCVL*GVYERL
Trigger: AAGTCTTTCGTAGACACCCCAGAGCACACACATCCC...TCCTGAGCAACTATGCCCCCGCCCCAGTAGGTTCAAGGCAAAGCAGCTCTGACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR-3UTR CCA 90 bp CAACTAGGAGGGAAGTTCATTCACACCATAGAAACTGTACAGCGACTGAGAGTGCACCTGCAGGGCAGCTaGAGCCAGCCGAGACCAGGC +
Preference number: 2 (lower is better)
Translates to: QLGGKFIHTIETVQRLRVHLQGS*SQPRPG
Trigger: GCCTGGTCTCGGCTGGCTCCAGCTGCCCTGCAGGTG...CACTCTCAGTCGCTGTACAGTTTCTATGGTGTGAATGAACTTCCCTCCTAGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR CAA 90 bp CTCTTCTGGGCTCCAATACACGTGTCCCTCCAGCAACACGCGGACTaGCAAAAAGTCAAGTCTGTCTGCTTCCCTCCAACTGCGAGAGCT +
Preference number: 2 (lower is better)
Translates to: LFWAPIHVSLQQHAD*QKVKSVCFPPTARA
Trigger: AGCTCTCGCAGTTGGAGGGAAGCAGACAGACTTGACTTTTTGCAAGTCCGCGTGTTGCTGGAGGGACACGTGTATTGGAGCCCAGAAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR-3UTR TCA 90 bp TGGACCCTGGAGCCTTCGCTCATGCCCATCCCTTTGCCTAGAACACCTGCCTCGAGGCAAGGTTATTGCTaGAGTACAGCATCTGCAAAC +
Preference number: 2 (lower is better)
Translates to: WTLEPSLMPIPLPRTPASRQGYC*STASAN
Trigger: GTTTGCAGATGCTGTACTTCAGCAATAACCTTGCCT...CGAGGCAGGTGTTCTAGGCAAAGGGATGGGCATGAGCGAAGGCTCCAGGGTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR-3UTR GCA 90 bp TGGACCCTGGAGCCTTCGCTCATGCCCATCCCTTTGCCTAGAACACCTGCCTCGAGCAACACGCGGACTTaGAAAAAGTCAAGTCTGTCT +
Preference number: 2 (lower is better)
Translates to: WTLEPSLMPIPLPRTPASSNTRT*KKSSLS
Trigger: AGACAGACTTGACTTTTTGCAAGTCCGCGTGTTGCT...CGAGGCAGGTGTTCTAGGCAAAGGGATGGGCATGAGCGAAGGCTCCAGGGTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR-3UTR CCA 90 bp CAGCACAGTGTCCAGGAACAGCCACAGCTCAGCGCCCATATGGGGGATAAAAGGTGTATGTATATGCACTaGAAGGGCCACCATGGGCCA +
Preference number: 2 (lower is better)
Translates to: QHSVQEQPQLSAHMGDKRCMYMH*KGHHGP
Trigger: TGGCCCATGGTGGCCCTTCCAGTGCATATACATACA...CCTTTTATCCCCCATATGGGCGCTGAGCTGTGGCTGTTCCTGGACACTGTGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR-3UTR CCA 90 bp CAGCAACTAGGAGGGAAGTTCATTCACACCATAGAAACTGTACAGCGACTGAGAGCGAAAGGCTGGGCATaGGGATGCGGCTGGACCCAG +
Preference number: 2 (lower is better)
Translates to: QQLGGKFIHTIETVQRLRAKGWA*GCGWTQ
Trigger: CTGGGTCCAGCCGCATCCCCATGCCCAGCCTTTCGC...TCTCAGTCGCTGTACAGTTTCTATGGTGTGAATGAACTTCCCTCCTAGTTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR-3UTR TCA 90 bp AAAGTCAAGTCTGTCTGCTTCCCTCCAACTGCGAGAGCTCAGGGTCAGCCAGGAAACACACACACACCCTaGATTGCACCTCTTCTCCAG +
Preference number: 2 (lower is better)
Translates to: KVKSVCFPPTARAQGQPGNTHTP*IAPLLQ
Trigger: CTGGAGAAGAGGTGCAATTCAGGGTGTGTGTGTGTT...TCCTGGCTGACCCTGAGCTCTCGCAGTTGGAGGGAAGCAGACAGACTTGACTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR-3UTR TCA 90 bp AGTACAGCATCTGCAAACTCGTGGCCCCTGCAGCCTCTCCAGATCACTGCCACCAAAGGCATTAGTGGCTaGACAACTAACTACCTGAGC +
Preference number: 2 (lower is better)
Translates to: STASANSWPLQPLQITATKGISG*TTNYLS
Trigger: GCTCAGGTAGTTAGTTGTTCAGCCACTAATGCCTTT...GGTGGCAGTGATCTGGAGAGGCTGCAGGGGCCACGAGTTTGCAGATGCTGTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR-3UTR TCA 90 bp GGTCAGAGCTGCTTTGCCTTGAACCTACTGGGGCGGGGGCATAGTTGCTCAGGAAAAGGCATTAGTGGCTaGACAACTAACTACCTGAGC +
Preference number: 2 (lower is better)
Translates to: GQSCFALNLLGRGHSCSGKGISG*TTNYLS
Trigger: GCTCAGGTAGTTAGTTGTTCAGCCACTAATGCCTTT...TCCTGAGCAACTATGCCCCCGCCCCAGTAGGTTCAAGGCAAAGCAGCTCTGACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR-3UTR TCA 90 bp TGTCCTGGCCAGTGGATCACAGCTTCCCTGGTTCTCATCTCTGTCACCCACAGGCTGATCCTGTTAACTTaGAGCCCAACCTTCCACATG +
Preference number: 2 (lower is better)
Translates to: CPGQWITASLVLISVTHRLILLT*SPTFHM
Trigger: CATGTGGAAGGTTGGGCTTCAAGTTAACAGGATCAG...CCTGTGGGTGACAGAGATGAGAACCAGGGAAGCTGTGATCCACTGGCCAGGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR-3UTR GCA 90 bp TGTCCTGGCCAGTGGATCACAGCTTCCCTGGTTCTCATCTCTGTCACCCACAGGAAAGTCAAGTCTGTCTaGTTCCCTCCAACTGCGAGA +
Preference number: 2 (lower is better)
Translates to: CPGQWITASLVLISVTHRKVKSV*FPPTAR
Trigger: TCTCGCAGTTGGAGGGAAGCAGACAGACTTGACTTT...CCTGTGGGTGACAGAGATGAGAACCAGGGAAGCTGTGATCCACTGGCCAGGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR-3UTR CCA 90 bp CAGCAACTAGGAGGGAAGTTCATTCACACCATAGAAACTGTACAGCGACTGAGAGCCCTGGGGTGGGTCTaGCCAGAATCCCAGAGCATC +
Preference number: 2 (lower is better)
Translates to: QQLGGKFIHTIETVQRLRALGWV*PESQSI
Trigger: GATGCTCTGGGATTCTGGCCAGACCCACCCCAGGGC...TCTCAGTCGCTGTACAGTTTCTATGGTGTGAATGAACTTCCCTCCTAGTTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR-3UTR CCA 90 bp CTTGTCCTGGCCAGTGGATCACAGCTTCCCTGGTTCTCATCTCTGTCACCCACAGGGATGTGTGTGCTCTaGGGTGTCTACGAAAGACTT +
Preference number: 2 (lower is better)
Translates to: LVLASGSQLPWFSSLSPTGMCVL*GVYERL
Trigger: AAGTCTTTCGTAGACACCCCAGAGCACACACATCCC...TGTGGGTGACAGAGATGAGAACCAGGGAAGCTGTGATCCACTGGCCAGGACAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR-3UTR CCA 90 bp CTGCCTCGAGGTGTCTGCTTGCAGAGTCACACGGTTCAGGGTAAGGGGAGGTTTTTCCAAGTCAGAGTTTaGGAACAAGAACAAGGCCCC +
Preference number: 2 (lower is better)
Translates to: LPRGVCLQSHTVQGKGRFFQVRV*EQEQGP
Trigger: GGGGCCTTGTTCTTGTTCCCAAACTCTGACTTGGAA...AAACCTCCCCTTACCCTGAACCGTGTGACTCTGCAAGCAGACACCTCGAGGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR-3UTR CCA 90 bp CAACTAGGAGGGAAGTTCATTCACACCATAGAAACTGTACAGCGACTGAGAGTGGGGCAGTGTTGGGCTTaGACCGAGCCATCCCCACAG +
Preference number: 2 (lower is better)
Translates to: QLGGKFIHTIETVQRLRVGQCWA*TEPSPQ
Trigger: CTGTGGGGATGGCTCGGTCCAAGCCCAACACTGCCC...CACTCTCAGTCGCTGTACAGTTTCTATGGTGTGAATGAACTTCCCTCCTAGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR-3UTR CCA 90 bp CAACTAGGAGGGAAGTTCATTCACACCATAGAAACTGTACAGCGACTGAGAGTGAGGCCGAGGGCTTTCTaGAGGAGGTGGCCTCTGCCT +
Preference number: 2 (lower is better)
Translates to: QLGGKFIHTIETVQRLRVRPRAF*RRWPLP
Trigger: AGGCAGAGGCCACCTCCTCCAGAAAGCCCTCGGCCT...CACTCTCAGTCGCTGTACAGTTTCTATGGTGTGAATGAACTTCCCTCCTAGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR-3UTR TCA 90 bp CAAACACCCAAGTCTAGAACCCGTTTGGGAAGCACTGCTATAGTGAAAGCTGAGACGAGACAGTCAGGATaGCAGGACAGACACCCCGAC +
Preference number: 2 (lower is better)
Translates to: QTPKSRTRLGSTAIVKAETRQSG*QDRHPD
Trigger: GTCGGGGTGTCTGTCCTGTCATCCTGACTGTCTCGT...CTCAGCTTTCACTATAGCAGTGCTTCCCAAACGGGTTCTAGACTTGGGTGTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR-3UTR TCA 90 bp GCCATGGGCCAGCAGGTACCAGCGCCATCAGCAACTAGGAGGGAAGTTCATTCACCTCCTTCTTCAAACTaGCTTCATGAAAGTCACTCC +
Preference number: 2 (lower is better)
Translates to: AMGQQVPAPSATRREVHSPPSSN*LHESHS
Trigger: GGAGTGACTTTCATGAAGTCAGTTTGAAGAAGGAGG...TGAATGAACTTCCCTCCTAGTTGCTGATGGCGCTGGTACCTGCTGGCCCATGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR-3UTR GCA 90 bp CTTGTCCTGGCCAGTGGATCACAGCTTCCCTGGTTCTCATCTCTGTCACCCACAGAATTCGGTCAGAGCTaGTTTGCCTTGAACCTACTG +
Preference number: 2 (lower is better)
Translates to: LVLASGSQLPWFSSLSPTEFGQS*FALNLL
Trigger: CAGTAGGTTCAAGGCAAAGCAGCTCTGACCGAATTC...TGTGGGTGACAGAGATGAGAACCAGGGAAGCTGTGATCCACTGGCCAGGACAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR-3UTR GCA 90 bp CAACTAGGAGGGAAGTTCATTCACACCATAGAAACTGTACAGCGACTGAGAGTGAGATGCCAAGGTGCCTaGCCACCACCGCTCTACGGA +
Preference number: 2 (lower is better)
Translates to: QLGGKFIHTIETVQRLRVRCQGA*PPPLYG
Trigger: TCCGTAGAGCGGTGGTGGGCAGGCACCTTGGCATCT...CACTCTCAGTCGCTGTACAGTTTCTATGGTGTGAATGAACTTCCCTCCTAGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR-3UTR CCA 90 bp GGTGTCTACGAAAGACTTCACAATAACGAGACAGTCAGGATGACAGGACAGACAGCAGGACATGTGCCCTaGGGTGGGTCTGGCCAGAAT +
Preference number: 2 (lower is better)
Translates to: GVYERLHNNETVRMTGQTAGHVP*GGSGQN
Trigger: ATTCTGGCCAGACCCACCCCAGGGCACATGTCCTGC...TGTCTGTCCTGTCATCCTGACTGTCTCGTTATTGTGAAGTCTTTCGTAGACACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR-3UTR CCA 90 bp CAACTAGGAGGGAAGTTCATTCACACCATAGAAACTGTACAGCGACTGAGAGTGCTGCTCTGTGGACCCTaGAGCCTTCGCTCATGCCCA +
Preference number: 2 (lower is better)
Translates to: QLGGKFIHTIETVQRLRVLLCGP*SLRSCP
Trigger: TGGGCATGAGCGAAGGCTCCAGGGTCCACAGAGCAG...CACTCTCAGTCGCTGTACAGTTTCTATGGTGTGAATGAACTTCCCTCCTAGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR-3UTR CCA 90 bp CAGCAACTAGGAGGGAAGTTCATTCACACCATAGAAACTGTACAGCGACTGAGAACAAGGTCAAGTGCCTaGGATCGGCAGGTGGGGCCT +
Preference number: 2 (lower is better)
Translates to: QQLGGKFIHTIETVQRLRTRSSA*DRQVGP
Trigger: AGGCCCCACCTGCCGATCCCAGGCACTTGACCTTGT...TCTCAGTCGCTGTACAGTTTCTATGGTGTGAATGAACTTCCCTCCTAGTTGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR-3UTR GCA 90 bp CAGCAACTAGGAGGGAAGTTCATTCACACCATAGAAACTGTACAGCGACTGAGAAGGAGCAGTCAAGCCTaGCCAGCTCCACTTCTTCCC +
Preference number: 2 (lower is better)
Translates to: QQLGGKFIHTIETVQRLRRSSQA*PAPLLP
Trigger: GGGAAGAAGTGGAGCTGGGCAGGCTTGACTGCTCCT...TCTCAGTCGCTGTACAGTTTCTATGGTGTGAATGAACTTCCCTCCTAGTTGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR-3UTR GCA 90 bp CAACTAGGAGGGAAGTTCATTCACACCATAGAAACTGTACAGCGACTGAGAGTGTCTCCCAGTGCTCCCTaGAAGGAGCTTCTCTGCCTC +
Preference number: 2 (lower is better)
Translates to: QLGGKFIHTIETVQRLRVSPSAP*KELLCL
Trigger: GAGGCAGAGAAGCTCCTTGCAGGGAGCACTGGGAGA...CACTCTCAGTCGCTGTACAGTTTCTATGGTGTGAATGAACTTCCCTCCTAGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR-3UTR TCA 90 bp GGTGTCTACGAAAGACTTCACAATAACGAGACAGTCAGGATGACAGGACAGACATCTGCTCCTGGCTCCTaGGGTAAAGAAGGTGAGACG +
Preference number: 2 (lower is better)
Translates to: GVYERLHNNETVRMTGQTSAPGS*GKEGET
Trigger: CGTCTCACCTTCTTTACCTCAGGAGCCAGGAGCAGA...TGTCTGTCCTGTCATCCTGACTGTCTCGTTATTGTGAAGTCTTTCGTAGACACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR-3UTR GCA 90 bp CAGCAACTAGGAGGGAAGTTCATTCACACCATAGAAACTGTACAGCGACTGAGACTCGAGGTGTCTGCTTaGAGAGTCACACGGTTCAGG +
Preference number: 2 (lower is better)
Translates to: QQLGGKFIHTIETVQRLRLEVSA*RVTRFR
Trigger: CCTGAACCGTGTGACTCTGCAAGCAGACACCTCGAG...TCTCAGTCGCTGTACAGTTTCTATGGTGTGAATGAACTTCCCTCCTAGTTGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR-3UTR CCA 90 bp CAACTAGGAGGGAAGTTCATTCACACCATAGAAACTGTACAGCGACTGAGAGTGGCCCAACCTTCCACATaGTATTCCCAGGCCACACAG +
Preference number: 2 (lower is better)
Translates to: QLGGKFIHTIETVQRLRVAQPST*YSQATQ
Trigger: CTGTGTGGCCTGGGAATACCATGTGGAAGGTTGGGC...CACTCTCAGTCGCTGTACAGTTTCTATGGTGTGAATGAACTTCCCTCCTAGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR-3UTR GCA 90 bp CAAACACCCAAGTCTAGAACCCGTTTGGGAAGCACTGCTATAGTGAAAGCTGAGCTAAGGGGATGTGTGTaGTCTGGGGTGTCTACGAAA +
Preference number: 2 (lower is better)
Translates to: QTPKSRTRLGSTAIVKAELRGCV*SGVSTK
Trigger: TTTCGTAGACACCCCAGAGCACACACATCCCCTTAG...CTCAGCTTTCACTATAGCAGTGCTTCCCAAACGGGTTCTAGACTTGGGTGTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR-3UTR GCA 90 bp CAACTAGGAGGGAAGTTCATTCACACCATAGAAACTGTACAGCGACTGAGAGTGTGGAGCCTTCGCTCATaGCCATCCCTTTGCCTAGAA +
Preference number: 2 (lower is better)
Translates to: QLGGKFIHTIETVQRLRVWSLRS*PSLCLE
Trigger: TTCTAGGCAAAGGGATGGGCATGAGCGAAGGCTCCA...CACTCTCAGTCGCTGTACAGTTTCTATGGTGTGAATGAACTTCCCTCCTAGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR-3UTR GCA 90 bp CAGCAACTAGGAGGGAAGTTCATTCACACCATAGAAACTGTACAGCGACTGAGAGACAACAGGAAAGGCTaGTCAGTGGAGTCGCAAGAT +
Preference number: 2 (lower is better)
Translates to: QQLGGKFIHTIETVQRLRDNRKG*SVESQD
Trigger: ATCTTGCGACTCCACTGAGCAGCCTTTCCTGTTGTC...TCTCAGTCGCTGTACAGTTTCTATGGTGTGAATGAACTTCCCTCCTAGTTGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR-3UTR TCA 90 bp CAGCAACTAGGAGGGAAGTTCATTCACACCATAGAAACTGTACAGCGACTGAGACTGATCCTGTTAACTTaGAGCCCAACCTTCCACATG +
Preference number: 2 (lower is better)
Translates to: QQLGGKFIHTIETVQRLRLILLT*SPTFHM
Trigger: CATGTGGAAGGTTGGGCTTCAAGTTAACAGGATCAG...TCTCAGTCGCTGTACAGTTTCTATGGTGTGAATGAACTTCCCTCCTAGTTGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR-3UTR GCA 90 bp CAGCAACTAGGAGGGAAGTTCATTCACACCATAGAAACTGTACAGCGACTGAGAAAAGTCAAGTCTGTCTaGTTCCCTCCAACTGCGAGA +
Preference number: 2 (lower is better)
Translates to: QQLGGKFIHTIETVQRLRKVKSV*FPPTAR
Trigger: TCTCGCAGTTGGAGGGAAGCAGACAGACTTGACTTT...TCTCAGTCGCTGTACAGTTTCTATGGTGTGAATGAACTTCCCTCCTAGTTGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR-3UTR CCA 90 bp CAGCAACTAGGAGGGAAGTTCATTCACACCATAGAAACTGTACAGCGACTGAGACTGAGGCTGCTTGACTaGTGTCTGATCCTGTTAACT +
Preference number: 2 (lower is better)
Translates to: QQLGGKFIHTIETVQRLRLRLLD*CLILLT
Trigger: AGTTAACAGGATCAGACACCAGTCAAGCAGCCTCAG...TCTCAGTCGCTGTACAGTTTCTATGGTGTGAATGAACTTCCCTCCTAGTTGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR-3UTR TCA 90 bp CAACTAGGAGGGAAGTTCATTCACACCATAGAAACTGTACAGCGACTGAGAGTGCCTCCTTCTTCAAACTaGCTTCATGAAAGTCACTCC +
Preference number: 2 (lower is better)
Translates to: QLGGKFIHTIETVQRLRVPPSSN*LHESHS
Trigger: GGAGTGACTTTCATGAAGTCAGTTTGAAGAAGGAGG...CACTCTCAGTCGCTGTACAGTTTCTATGGTGTGAATGAACTTCCCTCCTAGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR-3UTR GCA 90 bp CAACTAGGAGGGAAGTTCATTCACACCATAGAAACTGTACAGCGACTGAGAGTGATATATGTATGTATATaGACTGGAAGGGCCACCATG +
Preference number: 2 (lower is better)
Translates to: QLGGKFIHTIETVQRLRVIYVCI*TGRATM
Trigger: CATGGTGGCCCTTCCAGTGCATATACATACATATAT...CACTCTCAGTCGCTGTACAGTTTCTATGGTGTGAATGAACTTCCCTCCTAGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR GCA 72 bp ACCCAGACTCCGCTCAGCCCGGCTGTCGGGCGCCTGTaGCCTGCGGGCCCTGCGCGATCCCAGGTGTGGACG +
Preference number: 3 (lower is better)
Translates to: TQTPLSPAVGRL*PAGPARSQVWT
Trigger: CGTCCACACCTGGGATCGCGCAGGGCCCGCAGGGCACAGGCGCCCGACAGCCGGGCTGAGCGGAGTCTGGGT
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR-3UTR CAA 90 bp GAGGCTCTCTGGAGCGGGCAGTGTTGGGCTTGGACCGAGCCATCCCCACAGGTCGTTTCCCGGGTGGGCTaGACAACCCCTCCCGGCCCC +
Preference number: 3 (lower is better)
Translates to: EALWSGQCWAWTEPSPQVVSRVG*TTPPGP
Trigger: GGGGCCGGGAGGGGTTGTCAAGCCCACCCGGGAAAC...GACCTGTGGGGATGGCTCGGTCCAAGCCCAACACTGCCCGCTCCAGAGAGCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR GCA 72 bp GGGCTGTGGCCCTGGCCAATCCAGTACGGGGGACCCTaGAGCCCGAGGCTTCTCATCCACCAGACCCGCCCT +
Preference number: 3 (lower is better)
Translates to: GLWPWPIQYGGP*SPRLLIHQTRP
Trigger: AGGGCGGGTCTGGTGGATGAGAAGCCTCGGGCTGCAGGGTCCCCCGTACTGGATTGGCCAGGGCCACAGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000401624.5
3UTR-3UTR CAA 90 bp ATCAAGCCCCCACTCACACCCACCCAGAGCACCCAGGGTGTCCTCCCCACTGCCCGTTCCCAAACCCCCTaGCACGGTGGTGCCCTCGGC +
Preference number: 3 (lower is better)
Translates to: IKPPLTPTQSTQGVLPTARSQTP*HGGALG
Trigger: GCCGAGGGCACCACCGTGCAAGGGGGTTTGGGAACG...GGCAGTGGGGAGGACACCCTGGGTGCTCTGGGTGGGTGTGAGTGGGGGCTTGAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000401624.5
3UTR CCA 72 bp TATGCACTGGAAGGGCCACCATGGGCCACGCAGGCCTaGCTAACCCAGACTCCGCTCAGCCCGGCTGTCGGG +
Preference number: 3 (lower is better)
Translates to: YALEGPPWATQA*LTQTPLSPAVG
Trigger: CCCGACAGCCGGGCTGAGCGGAGTCTGGGTTAGCCAGGCCTGCGTGGCCCATGGTGGCCCTTCCAGTGCATA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR-3UTR CAA 90 bp ATCAAGCCCCCACTCACACCCACCCAGAGCACCCAGGGTGTCCTCCCCACTGCCTGGTGCCCTCGGCCTTaGGTTGGGTCCTTCCCCTCC +
Preference number: 3 (lower is better)
Translates to: IKPPLTPTQSTQGVLPTAWCPRP*VGSFPS
Trigger: GGAGGGGAAGGACCCAACCAAAGGCCGAGGGCACCA...GGCAGTGGGGAGGACACCCTGGGTGCTCTGGGTGGGTGTGAGTGGGGGCTTGAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000401624.5
3UTR GCA 72 bp TGGCCAGACTGGGCCGTCTCTGCACAGATGCCAAGGTaGCTGCCCACCACCGCTCTACGGAGCCCAGCAGAC +
Preference number: 3 (lower is better)
Translates to: WPDWAVSAQMPR*LPTTALRSPAD
Trigger: GTCTGCTGGGCTCCGTAGAGCGGTGGTGGGCAGGCACCTTGGCATCTGTGCAGAGACGGCCCAGTCTGGCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR CCA 72 bp CGCCTGTGCCCTGCGGGCCCTGCGCGATCCCAGGTGTaGACGAAGTATTGCTGTCTGCTCCTGGCTCCTGAG +
Preference number: 3 (lower is better)
Translates to: RLCPAGPARSQV*TKYCCLLLAPE
Trigger: CTCAGGAGCCAGGAGCAGACAGCAATACTTCGTCCACACCTGGGATCGCGCAGGGCCCGCAGGGCACAGGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR CCA 72 bp AGGGCTGAGGCTCTCTGGAGCGGGCAGTGTTGGGCTTaGACCGAGCCATCCCCACAGGTCTACCTGCCCCCA +
Preference number: 3 (lower is better)
Translates to: RAEALWSGQCWA*TEPSPQVYLPP
Trigger: TGGGGGCAGGTAGACCTGTGGGGATGGCTCGGTCCAAGCCCAACACTGCCCGCTCCAGAGAGCCTCAGCCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR CCA 72 bp GGAGGCAGGGCTGAGGCTCTCTGGAGCGGGCAGTGTTaGGCTTGGACCGAGCCATCCCCACAGGTCTACCTG +
Preference number: 3 (lower is better)
Translates to: GGRAEALWSGQC*AWTEPSPQVYL
Trigger: CAGGTAGACCTGTGGGGATGGCTCGGTCCAAGCCCAACACTGCCCGCTCCAGAGAGCCTCAGCCCTGCCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR GCA 72 bp CAGACTGGGCCGTCTCTGCACAGATGCCAAGGTGCCTaGCCACCACCGCTCTACGGAGCCCAGCAGACAGCT +
Preference number: 3 (lower is better)
Translates to: QTGPSLHRCQGA*PPPLYGAQQTA
Trigger: AGCTGTCTGCTGGGCTCCGTAGAGCGGTGGTGGGCAGGCACCTTGGCATCTGTGCAGAGACGGCCCAGTCTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR-3UTR CAA 90 bp GCCCCTCCAAGCAAGCCACTGCCGGCTCAGTCTCCCGCACCCTTCCTCTGCAGGGGTGTGGACGAAGTATaGCTGTCTGCTCCTGGCTCC +
Preference number: 3 (lower is better)
Translates to: APPSKPLPAQSPAPFLCRGVDEV*LSAPGS
Trigger: GGAGCCAGGAGCAGACAGCAATACTTCGTCCACACC...CCTGCAGAGGAAGGGTGCGGGAGACTGAGCCGGCAGTGGCTTGCTTGGAGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR-3UTR CAA 90 bp GCACAGATGCCAAGGTGCCTGCCCACCACCGCTCTACGGAGCCCAGCAGACAGCGGAAGGAAGGGCCCTTaGCCCAACCCTCACCCATGT +
Preference number: 3 (lower is better)
Translates to: AQMPRCLPTTALRSPADSGRKGP*PNPHPC
Trigger: ACATGGGTGAGGGTTGGGCAAAGGGCCCTTCCTTCC...GCTGTCTGCTGGGCTCCGTAGAGCGGTGGTGGGCAGGCACCTTGGCATCTGTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR CCA 72 bp AAACCCCCTTGCACGGTGGTGCCCTCGGCCTTTGGTTaGGTCCTTCCCCTCCCAGTCCCTTGGACTTCCAGG +
Preference number: 3 (lower is better)
Translates to: KPPCTVVPSAFG*VLPLPVPWTSR
Trigger: CCTGGAAGTCCAAGGGACTGGGAGGGGAAGGACCCAACCAAAGGCCGAGGGCACCACCGTGCAAGGGGGTTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000401624.5
3UTR-3UTR CAA 90 bp AGGGAGTTTGTGTCCTGCCCGCCAGAGCACACAGCCTGGTGTGACGGGTCAGACTCTTCCAGACCCGCCTaGGGGTCCTCCCCACACTCT +
Preference number: 3 (lower is better)
Translates to: REFVSCPPEHTAWCDGSDSSRPA*GSSPHS
Trigger: AGAGTGTGGGGAGGACCCCAAGGCGGGTCTGGAAGA...GTCTGACCCGTCACACCAGGCTGTGTGCTCTGGCGGGCAGGACACAAACTCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401624.5
3UTR-3UTR CAA 90 bp CCTCCCACCTCCATTCCTAGTAATCAAGCCCCCACTCACACCCACCCAGAGCACGCCCTCGGCCTTTGGTaGGGTCCTTCCCCTCCCAGT +
Preference number: 3 (lower is better)
Translates to: PPTSIPSNQAPTHTHPEHALGLW*GPSPPS
Trigger: ACTGGGAGGGGAAGGACCCAACCAAAGGCCGAGGGC...GTGCTCTGGGTGGGTGTGAGTGGGGGCTTGATTACTAGGAATGGAGGTGGGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000401624.5
3UTR TCA 72 bp GGTGTGGACGAAGTATTGCTGTCTGCTCCTGGCTCCTaGGGTAAAGAAGGTGAGACGGGGCGGGCGGTGGGC +
Preference number: 3 (lower is better)
Translates to: GVDEVLLSAPGS*GKEGETGRAVG
Trigger: GCCCACCGCCCGCCCCGTCTCACCTTCTTTACCTCAGGAGCCAGGAGCAGACAGCAATACTTCGTCCACACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR TCA 72 bp ACACAGCCTGGTGTGACGGGTCAGACAGTCACCCAGTaGATCAACTGCACTCACTGTGGGAGCCGGCCCGGC +
Preference number: 3 (lower is better)
Translates to: TQPGVTGQTVTQ*INCTHCGSRPG
Trigger: GCCGGGCCGGCTCCCACAGTGAGTGCAGTTGATTCACTGGGTGACTGTCTGACCCGTCACACCAGGCTGTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401624.5
3UTR GCA 72 bp GGAGAGGAAGAGGATTTGGCCAGACTGGGCCGTCTCTaGACAGATGCCAAGGTGCCTGCCCACCACCGCTCT +
Preference number: 3 (lower is better)
Translates to: GEEEDLARLGRL*TDAKVPAHHRS
Trigger: AGAGCGGTGGTGGGCAGGCACCTTGGCATCTGTGCAGAGACGGCCCAGTCTGGCCAAATCCTCTTCCTCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR GCA 72 bp GCGGGCCCTGCGCGATCCCAGGTGTGGACGAAGTATTaGTGTCTGCTCCTGGCTCCTGAGGTAAAGAAGGTG +
Preference number: 3 (lower is better)
Translates to: AGPARSQVWTKY*CLLLAPEVKKV
Trigger: CACCTTCTTTACCTCAGGAGCCAGGAGCAGACAGCAATACTTCGTCCACACCTGGGATCGCGCAGGGCCCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR GCA 72 bp CACTCCCTGCTCTGTGGACCCTGGAGCCTTCGCTCATaGCCATCCCTTTGCCTAGAACACCTGCCTCGAGGT +
Preference number: 3 (lower is better)
Translates to: HSLLCGPWSLRS*PSLCLEHLPRG
Trigger: ACCTCGAGGCAGGTGTTCTAGGCAAAGGGATGGGCATGAGCGAAGGCTCCAGGGTCCACAGAGCAGGGAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR-3UTR CAA 90 bp GGCCGTCTCTGCACAGATGCCAAGGTGCCTGCCCACCACCGCTCTACGGAGCCCAAGTCTAGAACCCGTTaGGGAAGCACTGCTATAGTG +
Preference number: 3 (lower is better)
Translates to: GRLCTDAKVPAHHRSTEPKSRTR*GSTAIV
Trigger: CACTATAGCAGTGCTTCCCAAACGGGTTCTAGACTT...GGGCTCCGTAGAGCGGTGGTGGGCAGGCACCTTGGCATCTGTGCAGAGACGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR GCA 72 bp TGTGGACCCTGGAGCCTTCGCTCATGCCCATCCCTTTaGCTAGAACACCTGCCTCGAGGTGTCTGCTTGCAG +
Preference number: 3 (lower is better)
Translates to: CGPWSLRSCPSL*LEHLPRGVCLQ
Trigger: CTGCAAGCAGACACCTCGAGGCAGGTGTTCTAGGCAAAGGGATGGGCATGAGCGAAGGCTCCAGGGTCCACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR CCA 72 bp CACAGGCACCTTGCTCAGCATCACAGCTCTAGGGTGTaGAGTAGGGCCCTCCACACCACCCCAGCTTCTTTG +
Preference number: 3 (lower is better)
Translates to: HRHLAQHHSSRV*SRALHTTPASL
Trigger: CAAAGAAGCTGGGGTGGTGTGGAGGGCCCTACTCCACACCCTAGAGCTGTGATGCTGAGCAAGGTGCCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR-3UTR CAA 90 bp GAGGCTCTCTGGAGCGGGCAGTGTTGGGCTTGGACCGAGCCATCCCCACAGGTCGCAAAGGCAAGGTTATaGCTGAAGTACAGCATCTGC +
Preference number: 3 (lower is better)
Translates to: EALWSGQCWAWTEPSPQVAKARL*LKYSIC
Trigger: GCAGATGCTGTACTTCAGCAATAACCTTGCCTTTGC...GACCTGTGGGGATGGCTCGGTCCAAGCCCAACACTGCCCGCTCCAGAGAGCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR-3UTR CAA 90 bp GAATTCGGTCAGAGCTGCTTTGCCTTGAACCTACTGGGGCGGGGGCATAGTTGCGGTGTGGACGAAGTATaGCTGTCTGCTCCTGGCTCC +
Preference number: 3 (lower is better)
Translates to: EFGQSCFALNLLGRGHSCGVDEV*LSAPGS
Trigger: GGAGCCAGGAGCAGACAGCAATACTTCGTCCACACC...GCAACTATGCCCCCGCCCCAGTAGGTTCAAGGCAAAGCAGCTCTGACCGAATTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR-3UTR CAA 90 bp CAGCACAGTGTCCAGGAACAGCCACAGCTCAGCGCCCATATGGGGGATAAAAGGCACACACACCCTGAATaGCACCTCTTCTCCAGGGCC +
Preference number: 3 (lower is better)
Translates to: QHSVQEQPQLSAHMGDKRHTHPE*HLFSRA
Trigger: GGCCCTGGAGAAGAGGTGCAATTCAGGGTGTGTGTG...CCTTTTATCCCCCATATGGGCGCTGAGCTGTGGCTGTTCCTGGACACTGTGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR-3UTR CAA 90 bp GCCATGGGCCAGCAGGTACCAGCGCCATCAGCAACTAGGAGGGAAGTTCATTCACACACACACCCTGAATaGCACCTCTTCTCCAGGGCC +
Preference number: 3 (lower is better)
Translates to: AMGQQVPAPSATRREVHSHTHPE*HLFSRA
Trigger: GGCCCTGGAGAAGAGGTGCAATTCAGGGTGTGTGTG...TGAATGAACTTCCCTCCTAGTTGCTGATGGCGCTGGTACCTGCTGGCCCATGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR-3UTR CAA 90 bp CTGCCTCGAGGTGTCTGCTTGCAGAGTCACACGGTTCAGGGTAAGGGGAGGTTTTCCGCCACAGGCACCTaGCTCAGCATCACAGCTCTA +
Preference number: 3 (lower is better)
Translates to: LPRGVCLQSHTVQGKGRFSATGT*LSITAL
Trigger: TAGAGCTGTGATGCTGAGCAAGGTGCCTGTGGCGGA...AAACCTCCCCTTACCCTGAACCGTGTGACTCTGCAAGCAGACACCTCGAGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR TCA 72 bp GGCGCACCCCACACCCTCACCAGCCCGGCCACAAGCTaGGTTCTTCCAAGTCAGAGTTTGGGAACAAGAACA +
Preference number: 3 (lower is better)
Translates to: GAPHTLTSPATS*VLPSQSLGTRT
Trigger: TGTTCTTGTTCCCAAACTCTGACTTGGAAGAACTCAGCTTGTGGCCGGGCTGGTGAGGGTGTGGGGTGCGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR TCA 72 bp GTTTGTGTCCTGCCCGCCAGAGCACACAGCCTGGTGTaGCGGGTCAGACAGTCACCCAGTGAATCAACTGCA +
Preference number: 3 (lower is better)
Translates to: VCVLPARAHSLV*RVRQSPSESTA
Trigger: TGCAGTTGATTCACTGGGTGACTGTCTGACCCGTCACACCAGGCTGTGTGCTCTGGCGGGCAGGACACAAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401624.5
3UTR GCA 72 bp CCATCCCTTTGCCTAGAACACCTGCCTCGAGGTGTCTaGTTGCAGAGTCACACGGTTCAGGGTAAGGGGAGG +
Preference number: 3 (lower is better)
Translates to: PSLCLEHLPRGV*LQSHTVQGKGR
Trigger: CCTCCCCTTACCCTGAACCGTGTGACTCTGCAAGCAGACACCTCGAGGCAGGTGTTCTAGGCAAAGGGATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR GCA 72 bp GACGGGCTTTACACACTTTGTCCTCCTTTAAGGGGCTaGCTGGTGCCGGAGAAGGTAGAGCAGGGGAGAGGA +
Preference number: 3 (lower is better)
Translates to: DGLYTLCPPLRG*LVPEKVEQGRG
Trigger: TCCTCTCCCCTGCTCTACCTTCTCCGGCACCAGGCAGCCCCTTAAAGGAGGACAAAGTGTGTAAAGCCCGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR CCA 72 bp AGGGAGTTTGTGTCCTGCCCGCCAGAGCACACAGCCTaGTGTGACGGGTCAGACAGTCACCCAGTGAATCAA +
Preference number: 3 (lower is better)
Translates to: REFVSCPPEHTA*CDGSDSHPVNQ
Trigger: TTGATTCACTGGGTGACTGTCTGACCCGTCACACCAGGCTGTGTGCTCTGGCGGGCAGGACACAAACTCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401624.5
3UTR CCA 72 bp GCCCAACCCTCACCCATGTTGACTTGTCCTGGCCAGTaGATCACAGCTTCCCTGGTTCTCATCTCTGTCACC +
Preference number: 3 (lower is better)
Translates to: AQPSPMLTCPGQ*ITASLVLISVT
Trigger: GGTGACAGAGATGAGAACCAGGGAAGCTGTGATCCACTGGCCAGGACAAGTCAACATGGGTGAGGGTTGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR GCA 72 bp ATTGCTGAAGTACAGCATCTGCAAACTCGTGGCCCCTaGAGCCTCTCCAGATCACTGCCACCAACATGCTCC +
Preference number: 3 (lower is better)
Translates to: IAEVQHLQTRGP*SLSRSLPPTCS
Trigger: GGAGCATGTTGGTGGCAGTGATCTGGAGAGGCTGCAGGGGCCACGAGTTTGCAGATGCTGTACTTCAGCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR GCA 72 bp CAGCAACACGCGGACTTGCAAAAAGTCAAGTCTGTCTaGTTCCCTCCAACTGCGAGAGCTCAGGGTCAGCCA +
Preference number: 3 (lower is better)
Translates to: QQHADLQKVKSV*FPPTARAQGQP
Trigger: TGGCTGACCCTGAGCTCTCGCAGTTGGAGGGAAGCAGACAGACTTGACTTTTTGCAAGTCCGCGTGTTGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR-3UTR CAA 90 bp TGTCCTGGCCAGTGGATCACAGCTTCCCTGGTTCTCATCTCTGTCACCCACAGGCTTCCAAGTCAGAGTTaGGGAACAAGAACAAGGCCC +
Preference number: 3 (lower is better)
Translates to: CPGQWITASLVLISVTHRLPSQS*GTRTRP
Trigger: GGGCCTTGTTCTTGTTCCCAAACTCTGACTTGGAAG...CCTGTGGGTGACAGAGATGAGAACCAGGGAAGCTGTGATCCACTGGCCAGGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR-3UTR CAA 90 bp CAGCAACTAGGAGGGAAGTTCATTCACACCATAGAAACTGTACAGCGACTGAGACGGGCAGTGTTGGGCTaGGACCGAGCCATCCCCACA +
Preference number: 3 (lower is better)
Translates to: QQLGGKFIHTIETVQRLRRAVLG*DRAIPT
Trigger: TGTGGGGATGGCTCGGTCCAAGCCCAACACTGCCCG...TCTCAGTCGCTGTACAGTTTCTATGGTGTGAATGAACTTCCCTCCTAGTTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR GCA 72 bp GAGGTTTCACGTCAGACCTGCCTAGGACGTGTTCCCTaGTCAGCTGCTCTGAACCCATGTGACAACAGGAAA +
Preference number: 3 (lower is better)
Translates to: EVSRQTCLGRVP*SAALNPCDNRK
Trigger: TTTCCTGTTGTCACATGGGTTCAGAGCAGCTGAGCAGGGAACACGTCCTAGGCAGGTCTGACGTGAAACCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR GCA 72 bp TTCTGGGCTTTTATTCAAAACAACACTGGTGGTGGCTaGCGCTTGGTTTCTCTACACCCGGGCCATGGGCCA +
Preference number: 3 (lower is better)
Translates to: FWAFIQNNTGGG*RLVSLHPGHGP
Trigger: TGGCCCATGGCCCGGGTGTAGAGAAACCAAGCGGCAGCCACCACCAGTGTTGTTTTGAATAAAAGCCCAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR CCA 72 bp ATATATATGTATGTATATGCACTGGAAGGGCCACCATaGGCCACGCAGGCCTGGCTAACCCAGACTCCGCTC +
Preference number: 3 (lower is better)
Translates to: IYMYVYALEGPP*ATQAWLTQTPL
Trigger: GAGCGGAGTCTGGGTTAGCCAGGCCTGCGTGGCCCATGGTGGCCCTTCCAGTGCATATACATACATATATAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR CCA 72 bp AGGCTTCTGGGCTTTTATTCAAAACAACACTGGTGGTaGCTGCCGCTTGGTTTCTCTACACCCGGGCCATGG +
Preference number: 3 (lower is better)
Translates to: RLLGFYSKQHWW*LPLGFSTPGPW
Trigger: CCATGGCCCGGGTGTAGAGAAACCAAGCGGCAGCCACCACCAGTGTTGTTTTGAATAAAAGCCCAGAAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR TCA 72 bp TCTACGAAAGACTTCACAATAACGAGACAGTCAGGATaGCAGGACAGACACCCCGACACGTGGGAGCCACGT +
Preference number: 3 (lower is better)
Translates to: STKDFTITRQSG*QDRHPDTWEPR
Trigger: ACGTGGCTCCCACGTGTCGGGGTGTCTGTCCTGTCATCCTGACTGTCTCGTTATTGTGAAGTCTTTCGTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR TCA 72 bp CTGAGGCTGCTTGACTGGTGTCTGATCCTGTTAACTTaGAGCCCAACCTTCCACATGGTATTCCCAGGCCAC +
Preference number: 3 (lower is better)
Translates to: LRLLDWCLILLT*SPTFHMVFPGH
Trigger: GTGGCCTGGGAATACCATGTGGAAGGTTGGGCTTCAAGTTAACAGGATCAGACACCAGTCAAGCAGCCTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR-3UTR CAA 90 bp TGTCCTGGCCAGTGGATCACAGCTTCCCTGGTTCTCATCTCTGTCACCCACAGGTCTGATCCTGTTAACTaGAAGCCCAACCTTCCACAT +
Preference number: 3 (lower is better)
Translates to: CPGQWITASLVLISVTHRSDPVN*KPNLPH
Trigger: ATGTGGAAGGTTGGGCTTCAAGTTAACAGGATCAGA...CCTGTGGGTGACAGAGATGAGAACCAGGGAAGCTGTGATCCACTGGCCAGGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR GCA 72 bp TTAGCAAAGGCAAGGTTATTGCTGAAGTACAGCATCTaGAAACTCGTGGCCCCTGCAGCCTCTCCAGATCAC +
Preference number: 3 (lower is better)
Translates to: LAKARLLLKYSI*KLVAPAASPDH
Trigger: GTGATCTGGAGAGGCTGCAGGGGCCACGAGTTTGCAGATGCTGTACTTCAGCAATAACCTTGCCTTTGCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR CCA 72 bp AATAGGCTTCTGGGCTTTTATTCAAAACAACACTGGTaGTGGCTGCCGCTTGGTTTCTCTACACCCGGGCCA +
Preference number: 3 (lower is better)
Translates to: NRLLGFYSKQHW*WLPLGFSTPGP
Trigger: TGGCCCGGGTGTAGAGAAACCAAGCGGCAGCCACCACCAGTGTTGTTTTGAATAAAAGCCCAGAAGCCTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR GCA 72 bp GAGAGACATCTAACCGGTGGACTAAGGGGATGTGTGTaGTCTGGGGTGTCTACGAAAGACTTCACAATAACG +
Preference number: 3 (lower is better)
Translates to: ERHLTGGLRGCV*SGVSTKDFTIT
Trigger: CGTTATTGTGAAGTCTTTCGTAGACACCCCAGAGCACACACATCCCCTTAGTCCACCGGTTAGATGTCTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR CCA 72 bp ATGACAGGACAGACACCCCGACACGTGGGAGCCACGTaGGATCTTAGCAGCGTTTCTTCTTTAAAGGAAAAA +
Preference number: 3 (lower is better)
Translates to: MTGQTPRHVGAT*DLSSVSSLKEK
Trigger: TTTTTCCTTTAAAGAAGAAACGCTGCTAAGATCCCACGTGGCTCCCACGTGTCGGGGTGTCTGTCCTGTCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR CCA 72 bp ACATCTAACCGGTGGACTAAGGGGATGTGTGTGCTCTaGGGTGTCTACGAAAGACTTCACAATAACGAGACA +
Preference number: 3 (lower is better)
Translates to: TSNRWTKGMCVL*GVYERLHNNET
Trigger: TGTCTCGTTATTGTGAAGTCTTTCGTAGACACCCCAGAGCACACACATCCCCTTAGTCCACCGGTTAGATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR-3UTR CAA 90 bp CAACTAGGAGGGAAGTTCATTCACACCATAGAAACTGTACAGCGACTGAGAGTGCTTCCAAGTCAGAGTTaGGGAACAAGAACAAGGCCC +
Preference number: 3 (lower is better)
Translates to: QLGGKFIHTIETVQRLRVLPSQS*GTRTRP
Trigger: GGGCCTTGTTCTTGTTCCCAAACTCTGACTTGGAAG...CACTCTCAGTCGCTGTACAGTTTCTATGGTGTGAATGAACTTCCCTCCTAGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR GCA 72 bp TATATATATGCATATATATATATATATGTATGTATATaGACTGGAAGGGCCACCATGGGCCACGCAGGCCTG +
Preference number: 3 (lower is better)
Translates to: YIYAYIYIYVCI*TGRATMGHAGL
Trigger: CAGGCCTGCGTGGCCCATGGTGGCCCTTCCAGTGCATATACATACATATATATATATATATGCATATATATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp GAGGGCTGTGGCCCTGGCCAATCCAGTACGGGGGACCCTGCAGCCCGAGGCTTCGCAGGGGGCGTAGGGTaGGCAGGAGCCGCAAGACTC +
Preference number: 4 (lower is better)
Translates to: EGCGPGQSSTGDPAARGFAGGVG*AGAARL
Trigger: GAGTCTTGCGGCTCCTGCGCACCCTACGCCCCCTGC...GAAGCCTCGGGCTGCAGGGTCCCCCGTACTGGATTGGCCAGGGCCACAGCCCTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR CCA 90 bp GAGGGCTGTGGCCCTGGCCAATCCAGTACGGGGGACCCTGCAGCCCGAGGCTTCCGGCCGTCCTCATGCTaGCAGCAAGGGCAGCTGGCG +
Preference number: 4 (lower is better)
Translates to: EGCGPGQSSTGDPAARGFRPSSC*QQGQLA
Trigger: CGCCAGCTGCCCTTGCTGCCAGCATGAGGACGGCCG...GAAGCCTCGGGCTGCAGGGTCCCCCGTACTGGATTGGCCAGGGCCACAGCCCTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR CCA 90 bp GGCCGTCTCTGCACAGATGCCAAGGTGCCTGCCCACCACCGCTCTACGGAGCCCCGCGCTGCGGCCCCATaGCCCGTAGTAGGAGCTCCG +
Preference number: 4 (lower is better)
Translates to: GRLCTDAKVPAHHRSTEPRAAAP*PVVGAP
Trigger: CGGAGCTCCTACTACGGGCCATGGGGCCGCAGCGCG...GGGCTCCGTAGAGCGGTGGTGGGCAGGCACCTTGGCATCTGTGCAGAGACGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp GAGGGCTGTGGCCCTGGCCAATCCAGTACGGGGGACCCTGCAGCCCGAGGCTTCCAGCTGCGCTCGTCGTaGGTGCAGTCCCGCAGCGTG +
Preference number: 4 (lower is better)
Translates to: EGCGPGQSSTGDPAARGFQLRSS*VQSRSV
Trigger: CACGCTGCGGGACTGCACCCACGACGAGCGCAGCTG...GAAGCCTCGGGCTGCAGGGTCCCCCGTACTGGATTGGCCAGGGCCACAGCCCTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR CCA 90 bp GAGGCTCTCTGGAGCGGGCAGTGTTGGGCTTGGACCGAGCCATCCCCACAGGTCTGCAGCCCGGGCTGGTaGAGCCCCCGCTGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: EALWSGQCWAWTEPSPQVCSPGW*SPRCCG
Trigger: GCCACAGCAGCGGGGGCTCCACCAGCCCGGGCTGCA...GACCTGTGGGGATGGCTCGGTCCAAGCCCAACACTGCCCGCTCCAGAGAGCCTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR TCA 90 bp CAAACCCCCTTGCACGGTGGTGCCCTCGGCCTTTGGTTGGGTCCTTCCCCTCCCCGGGCTGCTCCGTGGTaGCTCCTGGCTCAGCGGCTG +
Preference number: 4 (lower is better)
Translates to: QTPLHGGALGLWLGPSPPRAAPW*LLAQRL
Trigger: CAGCCGCTGAGCCAGGAGTCACCACGGAGCAGCCCG...GGGAGGGGAAGGACCCAACCAAAGGCCGAGGGCACCACCGTGCAAGGGGGTTTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR TCA 90 bp GAGGCTCTCTGGAGCGGGCAGTGTTGGGCTTGGACCGAGCCATCCCCACAGGTCCGGGCTGCTCCGTGGTaGCTCCTGGCTCAGCGGCTG +
Preference number: 4 (lower is better)
Translates to: EALWSGQCWAWTEPSPQVRAAPW*LLAQRL
Trigger: CAGCCGCTGAGCCAGGAGTCACCACGGAGCAGCCCG...GACCTGTGGGGATGGCTCGGTCCAAGCCCAACACTGCCCGCTCCAGAGAGCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR TCA 90 bp CACCCCCACAGCGGAGCCCTCAGTGCTTCAGACCTCTGTGTGCCCGTGGGTAGGCTGCCGGCCTCGATCTaGGGCCGCTCCAGGGCGATG +
Preference number: 4 (lower is better)
Translates to: HPHSGALSASDLCVPVGRLPASI*GRSRAM
Trigger: CATCGCCCTGGAGCGGCCTCAGATCGAGGCCGGCAG...CCTACCCACGGGCACACAGAGGTCTGAAGCACTGAGGGCTCCGCTGTGGGGGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR GCA 90 bp ATCACAGGCCTCTTCCAGACCCGCCTTGGGGTCCTCCCCACACTCTGCTGTCCCTGGCCCAGGCCGCGCTaGGGCCCCATGGCCCGTAGT +
Preference number: 4 (lower is better)
Translates to: ITGLFQTRLGVLPTLCCPWPRPR*GPMARS
Trigger: ACTACGGGCCATGGGGCCGCAGCGCGGCCTGGGCCA...GGGACAGCAGAGTGTGGGGAGGACCCCAAGGCGGGTCTGGAAGAGGCCTGTGAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR CCA 90 bp ATCAAGCCCCCACTCACACCCACCCAGAGCACCCAGGGTGTCCTCCCCACTGCCCCAGGGCGCGGCGCTTaGCCTTGCGCAGGATGTGGC +
Preference number: 4 (lower is better)
Translates to: IKPPLTPTQSTQGVLPTAPGRGA*PCAGCG
Trigger: GCCACATCCTGCGCAAGGCCAAGCGCCGCGCCCTGG...GGCAGTGGGGAGGACACCCTGGGTGCTCTGGGTGGGTGTGAGTGGGGGCTTGAT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR CCA 90 bp GAGGCTCTCTGGAGCGGGCAGTGTTGGGCTTGGACCGAGCCATCCCCACAGGTCGGCTGCACCAGGGTGTaGGGCGTCGCATCCAGGGGG +
Preference number: 4 (lower is better)
Translates to: EALWSGQCWAWTEPSPQVGCTRV*GVASRG
Trigger: CCCCCTGGATGCGACGCCCCACACCCTGGTGCAGCC...GACCTGTGGGGATGGCTCGGTCCAAGCCCAACACTGCCCGCTCCAGAGAGCCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp GCCCCTCCAAGCAAGCCACTGCCGGCTCAGTCTCCCGCACCCTTCCTCTGCAGGCGGCCGTCCTCATGCTaGCAGCAAGGGCAGCTGGCG +
Preference number: 4 (lower is better)
Translates to: APPSKPLPAQSPAPFLCRRPSSC*QQGQLA
Trigger: CGCCAGCTGCCCTTGCTGCCAGCATGAGGACGGCCG...CCTGCAGAGGAAGGGTGCGGGAGACTGAGCCGGCAGTGGCTTGCTTGGAGGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR TCA 90 bp CGGGTCAGACAGTCACCCAGTGAATCAACTGCACTCACTGTGGGAGCCGGCCCGAGAGGCCGCTGGCATTaGGGTCCTGGCGCCCCGCCC +
Preference number: 4 (lower is better)
Translates to: RVRQSPSESTALTVGAGPRGRWH*GPGAPP
Trigger: GGGCGGGGCGCCAGGACCTCAATGCCAGCGGCCTCT...CGGGCCGGCTCCCACAGTGAGTGCAGTTGATTCACTGGGTGACTGTCTGACCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR TCA 90 bp GAGGCTCTCTGGAGCGGGCAGTGTTGGGCTTGGACCGAGCCATCCCCACAGGTCCTTGGCTCCCCCGGCTaGGGCCAGGGACACCACGAT +
Preference number: 4 (lower is better)
Translates to: EALWSGQCWAWTEPSPQVLGSPG*GQGHHD
Trigger: ATCGTGGTGTCCCTGGCCTCAGCCGGGGGAGCCAAG...GACCTGTGGGGATGGCTCGGTCCAAGCCCAACACTGCCCGCTCCAGAGAGCCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp TTCCCAAACCCCCTTGCACGGTGGTGCCCTCGGCCTTTGGTTGGGTCCTTCCCCGTGGCGGGGATGGGCTaGACCAGGGTGTGGGGCGTC +
Preference number: 4 (lower is better)
Translates to: FPNPLARWCPRPLVGSFPVAGMG*TRVWGV
Trigger: GACGCCCCACACCCTGGTGCAGCCCATCCCCGCCAC...GGGGAAGGACCCAACCAAAGGCCGAGGGCACCACCGTGCAAGGGGGTTTGGGAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR GCA 90 bp GGCCGTCTCTGCACAGATGCCAAGGTGCCTGCCCACCACCGCTCTACGGAGCCCGGCTGCTCAGGCAGCTaGGCTCGTCGTGGGTGCAGT +
Preference number: 4 (lower is better)
Translates to: GRLCTDAKVPAHHRSTEPGCSGS*ARRGCS
Trigger: ACTGCACCCACGACGAGCGCAGCTGCCTGAGCAGCC...GGGCTCCGTAGAGCGGTGGTGGGCAGGCACCTTGGCATCTGTGCAGAGACGGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp GCACAGATGCCAAGGTGCCTGCCCACCACCGCTCTACGGAGCCCAGCAGACAGCTGGAGTCGTGGTGGGTaGAGCCCGGGCTGGTGGAGC +
Preference number: 4 (lower is better)
Translates to: AQMPRCLPTTALRSPADSWSRGG*SPGWWS
Trigger: GCTCCACCAGCCCGGGCTGCACCCACCACGACTCCA...GCTGTCTGCTGGGCTCCGTAGAGCGGTGGTGGGCAGGCACCTTGGCATCTGTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp GAGGCTCTCTGGAGCGGGCAGTGTTGGGCTTGGACCGAGCCATCCCCACAGGTCCCCCACAGGTCTACCTaGCCCCAGGGAGGACTGGGC +
Preference number: 4 (lower is better)
Translates to: EALWSGQCWAWTEPSPQVPHRST*PQGGLG
Trigger: GCCCAGTCCTCCCTGGGGGCAGGTAGACCTGTGGGG...GACCTGTGGGGATGGCTCGGTCCAAGCCCAACACTGCCCGCTCCAGAGAGCCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp CCCTTGCACGGTGGTGCCCTCGGCCTTTGGTTGGGTCCTTCCCCTCCCAGTCCCGTTCCCAAACCCCCTTaGACGGTGGTGCCCTCGGCC +
Preference number: 4 (lower is better)
Translates to: PLHGGALGLWLGPSPPSPVPKPP*TVVPSA
Trigger: GGCCGAGGGCACCACCGTGCAAGGGGGTTTGGGAAC...GGGACTGGGAGGGGAAGGACCCAACCAAAGGCCGAGGGCACCACCGTGCAAGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR CCA 90 bp CCTAGTAATCAAGCCCCCACTCACACCCACCCAGAGCACCCAGGGTGTCCTCCCCGGGGCTCCTTGGCGTaGGGCCCAGGTTTGGCGGGG +
Preference number: 4 (lower is better)
Translates to: PSNQAPTHTHPEHPGCPPRGSLA*GPGLAG
Trigger: CCCCGCCAAACCTGGGCCCCACGCCAAGGAGCCCCG...GGGAGGACACCCTGGGTGCTCTGGGTGGGTGTGAGTGGGGGCTTGATTACTAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR CCA 90 bp ATCAAGCCCCCACTCACACCCACCCAGAGCACCCAGGGTGTCCTCCCCACTGCCAGTGCCGGGGCTCCTTaGCGTGGGGCCCAGGTTTGG +
Preference number: 4 (lower is better)
Translates to: IKPPLTPTQSTQGVLPTASAGAP*RGAQVW
Trigger: CCAAACCTGGGCCCCACGCCAAGGAGCCCCGGCACT...GGCAGTGGGGAGGACACCCTGGGTGCTCTGGGTGGGTGTGAGTGGGGGCTTGAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR CCA 90 bp GGCCGTCTCTGCACAGATGCCAAGGTGCCTGCCCACCACCGCTCTACGGAGCCCGATCGGAAGCCAGCGTaGCGGGGATGGGCTGCACCA +
Preference number: 4 (lower is better)
Translates to: GRLCTDAKVPAHHRSTEPDRKPA*RGWAAP
Trigger: TGGTGCAGCCCATCCCCGCCACGCTGGCTTCCGATC...GGGCTCCGTAGAGCGGTGGTGGGCAGGCACCTTGGCATCTGTGCAGAGACGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp CAAACCCCCTTGCACGGTGGTGCCCTCGGCCTTTGGTTGGGTCCTTCCCCTCCCGGCAGCAAGGGCAGCTaGCGGGATCGGAAGCCAGCG +
Preference number: 4 (lower is better)
Translates to: QTPLHGGALGLWLGPSPPGSKGS*RDRKPA
Trigger: CGCTGGCTTCCGATCCCGCCAGCTGCCCTTGCTGCC...GGGAGGGGAAGGACCCAACCAAAGGCCGAGGGCACCACCGTGCAAGGGGGTTTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR CCA 90 bp CGGGTCAGACAGTCACCCAGTGAATCAACTGCACTCACTGTGGGAGCCGGCCCGGAGCCCGAGCCCTCCTaGCCCGAGTCGGTGCTGCCC +
Preference number: 4 (lower is better)
Translates to: RVRQSPSESTALTVGAGPEPEPS*PESVLP
Trigger: GGGCAGCACCGACTCGGGCCAGGAGGGCTCGGGCTC...CGGGCCGGCTCCCACAGTGAGTGCAGTTGATTCACTGGGTGACTGTCTGACCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR CCA 90 bp CTCAGCGTCACCCCAGCGTTCCCAAACCCCCTTGCACGGTGGTGCCCTCGGCCTCCAGGGCCACCAGCATaGGGTCCGGCTGCAGTGAGA +
Preference number: 4 (lower is better)
Translates to: LSVTPAFPNPLARWCPRPPGPPA*GPAAVR
Trigger: TCTCACTGCAGCCGGACCCCATGCTGGTGGCCCTGG...AGGCCGAGGGCACCACCGTGCAAGGGGGTTTGGGAACGCTGGGGTGACGCTGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR CCA 90 bp GTGTCCTGCCCGCCAGAGCACACAGCCTGGTGTGACGGGTCAGACAGTCACCCACGCGCTGCGGCCCCATaGCCCGTAGTAGGAGCTCCG +
Preference number: 4 (lower is better)
Translates to: VSCPPEHTAWCDGSDSHPRAAAP*PVVGAP
Trigger: CGGAGCTCCTACTACGGGCCATGGGGCCGCAGCGCG...TGGGTGACTGTCTGACCCGTCACACCAGGCTGTGTGCTCTGGCGGGCAGGACAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR CCA 90 bp GGCCGTCTCTGCACAGATGCCAAGGTGCCTGCCCACCACCGCTCTACGGAGCCCAATGTGGTGGGCGTGTaGGGTGTGCAGGGGTGCGGC +
Preference number: 4 (lower is better)
Translates to: GRLCTDAKVPAHHRSTEPNVVGV*GVQGCG
Trigger: GCCGCACCCCTGCACACCCCACACGCCCACCACATT...GGGCTCCGTAGAGCGGTGGTGGGCAGGCACCTTGGCATCTGTGCAGAGACGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp CCTAGTAATCAAGCCCCCACTCACACCCACCCAGAGCACCCAGGGTGTCCTCCCAGCGTCCGGCGGTGGTaGCGGTGGCGGTGCGCCAGA +
Preference number: 4 (lower is better)
Translates to: PSNQAPTHTHPEHPGCPPSVRRW*RWRCAR
Trigger: TCTGGCGCACCGCCACCGCCACCACCGCCGGACGCT...GGGAGGACACCCTGGGTGCTCTGGGTGGGTGTGAGTGGGGGCTTGATTACTAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR CCA 90 bp CTGAATTGCACCTCTTCTCCAGGGCCTGGTGCCCTCAGAGGCCTGAGGGTCCTCAGCGTCCGGCGGTGGTaGCGGTGGCGGTGCGCCAGA +
Preference number: 4 (lower is better)
Translates to: LNCTSSPGPGALRGLRVLSVRRW*RWRCAR
Trigger: TCTGGCGCACCGCCACCGCCACCACCGCCGGACGCT...GAGGACCCTCAGGCCTCTGAGGGCACCAGGCCCTGGAGAAGAGGTGCAATTCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp CAAACCCCCTTGCACGGTGGTGCCCTCGGCCTTTGGTTGGGTCCTTCCCCTCCCCCAGGGCCCAGGCCATaGGCCATCTCCAGCTCGAGC +
Preference number: 4 (lower is better)
Translates to: QTPLHGGALGLWLGPSPPPGPRP*AISSSS
Trigger: GCTCGAGCTGGAGATGGCCCATGGCCTGGGCCCTGG...GGGAGGGGAAGGACCCAACCAAAGGCCGAGGGCACCACCGTGCAAGGGGGTTTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR CCA 90 bp CTGAATTGCACCTCTTCTCCAGGGCCTGGTGCCCTCAGAGGCCTGAGGGTCCTCTGCCCGCGGAGCTGCTaGGGCTGGCGTCCAGCGACG +
Preference number: 4 (lower is better)
Translates to: LNCTSSPGPGALRGLRVLCPRSC*GWRPAT
Trigger: CGTCGCTGGACGCCAGCCCCAGCAGCTCCGCGGGCA...GAGGACCCTCAGGCCTCTGAGGGCACCAGGCCCTGGAGAAGAGGTGCAATTCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp GGCCGTCTCTGCACAGATGCCAAGGTGCCTGCCCACCACCGCTCTACGGAGCCCTCCATGGAGTCGTGGTaGGTGCAGCCCGGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: GRLCTDAKVPAHHRSTEPSMESW*VQPGLV
Trigger: CACCAGCCCGGGCTGCACCCACCACGACTCCATGGA...GGGCTCCGTAGAGCGGTGGTGGGCAGGCACCTTGGCATCTGTGCAGAGACGGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp GCCCCTCCAAGCAAGCCACTGCCGGCTCAGTCTCCCGCACCCTTCCTCTGCAGGGCCCCCAGGGAGGACTaGGCAGTTCCTTCCGCCACA +
Preference number: 4 (lower is better)
Translates to: APPSKPLPAQSPAPFLCRAPRED*AVPSAT
Trigger: TGTGGCGGAAGGAACTGCCCAGTCCTCCCTGGGGGC...CCTGCAGAGGAAGGGTGCGGGAGACTGAGCCGGCAGTGGCTTGCTTGGAGGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR TCA 90 bp GCCCCTCCAAGCAAGCCACTGCCGGCTCAGTCTCCCGCACCCTTCCTCTGCAGGACGGCGGCTTGTGCTTaGGGCTGTTCCAGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: APPSKPLPAQSPAPFLCRTAACA*GCSSWS
Trigger: GCTCCAGCTGGAACAGCCTCAAGCACAAGCCGCCGT...CCTGCAGAGGAAGGGTGCGGGAGACTGAGCCGGCAGTGGCTTGCTTGGAGGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp CGGGTCAGACAGTCACCCAGTGAATCAACTGCACTCACTGTGGGAGCCGGCCCGAGGCTCCGTCCTCGCTaGTCCGGGCCCCGTCCCCAT +
Preference number: 4 (lower is better)
Translates to: RVRQSPSESTALTVGAGPRLRPR*SGPRPH
Trigger: ATGGGGACGGGGCCCGGAGCAGCGAGGACGGAGCCT...CGGGCCGGCTCCCACAGTGAGTGCAGTTGATTCACTGGGTGACTGTCTGACCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR GCA 90 bp CTGAATTGCACCTCTTCTCCAGGGCCTGGTGCCCTCAGAGGCCTGAGGGTCCTCAGGCTCCGTCCTCGCTaGTCCGGGCCCCGTCCCCAT +
Preference number: 4 (lower is better)
Translates to: LNCTSSPGPGALRGLRVLRLRPR*SGPRPH
Trigger: ATGGGGACGGGGCCCGGAGCAGCGAGGACGGAGCCT...GAGGACCCTCAGGCCTCTGAGGGCACCAGGCCCTGGAGAAGAGGTGCAATTCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp GAGGGCTGTGGCCCTGGCCAATCCAGTACGGGGGACCCTGCAGCCCGAGGCTTCCTGGCTGGCAGACACTaGAGGGTGGAAGAACTCGGC +
Preference number: 4 (lower is better)
Translates to: EGCGPGQSSTGDPAARGFLAGRH*RVEELG
Trigger: GCCGAGTTCTTCCACCCTGCAGTGTCTGCCAGCCAG...GAAGCCTCGGGCTGCAGGGTCCCCCGTACTGGATTGGCCAGGGCCACAGCCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR GCA 90 bp GAGGGCTGTGGCCCTGGCCAATCCAGTACGGGGGACCCTGCAGCCCGAGGCTTCTGGGGAGGGTTCCAGTaGCAGTGCCCTTTTCTGGGC +
Preference number: 4 (lower is better)
Translates to: EGCGPGQSSTGDPAARGFWGGFQ*QCPFLG
Trigger: GCCCAGAAAAGGGCACTGGCACTGGAACCCTCCCCA...GAAGCCTCGGGCTGCAGGGTCCCCCGTACTGGATTGGCCAGGGCCACAGCCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR GCA 90 bp GAGGGCTGTGGCCCTGGCCAATCCAGTACGGGGGACCCTGCAGCCCGAGGCTTCGGAGGTGTCGGTACCTaGCGGAGGAGGGTACAGTTG +
Preference number: 4 (lower is better)
Translates to: EGCGPGQSSTGDPAARGFGGVGT*RRRVQL
Trigger: CAACTGTACCCTCCTCCGGCAGGTACCGACACCTCC...GAAGCCTCGGGCTGCAGGGTCCCCCGTACTGGATTGGCCAGGGCCACAGCCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR GCA 90 bp CTGAATTGCACCTCTTCTCCAGGGCCTGGTGCCCTCAGAGGCCTGAGGGTCCTCGTGCCCTGCGGGCCCTaGGCGATCCCAGGTGTGGAC +
Preference number: 4 (lower is better)
Translates to: LNCTSSPGPGALRGLRVLVPCGP*AIPGVD
Trigger: GTCCACACCTGGGATCGCGCAGGGCCCGCAGGGCAC...GAGGACCCTCAGGCCTCTGAGGGCACCAGGCCCTGGAGAAGAGGTGCAATTCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp TCACCCAGTGAATCAACTGCACTCACTGTGGGAGCCGGCCCGGCCCCATTTCCCGGGTGTCCTCCCCACTaGCAGCACCCCGCCACCCTG +
Preference number: 4 (lower is better)
Translates to: SPSESTALTVGAGPAPFPGCPPH*QHPATL
Trigger: CAGGGTGGCGGGGTGCTGGCAGTGGGGAGGACACCC...GGGAAATGGGGCCGGGCCGGCTCCCACAGTGAGTGCAGTTGATTCACTGGGTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR CCA 90 bp GAGGCTCTCTGGAGCGGGCAGTGTTGGGCTTGGACCGAGCCATCCCCACAGGTCCTGGCATTGAGGTCCTaGCGCCCCGCCCCAAAGTCG +
Preference number: 4 (lower is better)
Translates to: EALWSGQCWAWTEPSPQVLALRS*RPAPKS
Trigger: CGACTTTGGGGCGGGGCGCCAGGACCTCAATGCCAG...GACCTGTGGGGATGGCTCGGTCCAAGCCCAACACTGCCCGCTCCAGAGAGCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp GGATCACAGGCCTCTTCCAGACCCGCCTTGGGGTCCTCCCCACACTCTGCTGTCCACCCTTGTGGGGGTTaGCGCTGCCCGTGCGGCACA +
Preference number: 4 (lower is better)
Translates to: GSQASSRPALGSSPHSAVHPCGG*RCPCGT
Trigger: TGTGCCGCACGGGCAGCGCCAACCCCCACAAGGGTG...GACAGCAGAGTGTGGGGAGGACCCCAAGGCGGGTCTGGAAGAGGCCTGTGATCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR CCA 90 bp GCCCCTCCAAGCAAGCCACTGCCGGCTCAGTCTCCCGCACCCTTCCTCTGCAGGTTGATGGCACCCTTGTaGGGGTTGGCGCTGCCCGTG +
Preference number: 4 (lower is better)
Translates to: APPSKPLPAQSPAPFLCRLMAPL*GLALPV
Trigger: CACGGGCAGCGCCAACCCCCACAAGGGTGCCATCAA...CCTGCAGAGGAAGGGTGCGGGAGACTGAGCCGGCAGTGGCTTGCTTGGAGGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp ACCCCAGCGTTCCCAAACCCCCTTGCACGGTGGTGCCCTCGGCCTTTGGTTGGGAGCTGGCCACCGTGCTaGAGGACAGGTAGCGCTGCC +
Preference number: 4 (lower is better)
Translates to: TPAFPNPLARWCPRPLVGSWPPC*RTGSAA
Trigger: GGCAGCGCTACCTGTCCTCCAGCACGGTGGCCAGCT...CCCAACCAAAGGCCGAGGGCACCACCGTGCAAGGGGGTTTGGGAACGCTGGGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR CCA 90 bp GCACAGATGCCAAGGTGCCTGCCCACCACCGCTCTACGGAGCCCAGCAGACAGCAGCTGGCCACCGTGCTaGAGGACAGGTAGCGCTGCC +
Preference number: 4 (lower is better)
Translates to: AQMPRCLPTTALRSPADSSWPPC*RTGSAA
Trigger: GGCAGCGCTACCTGTCCTCCAGCACGGTGGCCAGCT...GCTGTCTGCTGGGCTCCGTAGAGCGGTGGTGGGCAGGCACCTTGGCATCTGTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp GGGGACAGCACAGTGTCCAGGAACAGCCACAGCTCAGCGCCCATATGGGGGATACGGGGCTCCTTGGCGTaGGGCCCAGGTTTGGCGGGG +
Preference number: 4 (lower is better)
Translates to: GDSTVSRNSHSSAPIWGIRGSLA*GPGLAG
Trigger: CCCCGCCAAACCTGGGCCCCACGCCAAGGAGCCCCG...TATCCCCCATATGGGCGCTGAGCTGTGGCTGTTCCTGGACACTGTGCTGTCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp AGGGAGTTTGTGTCCTGCCCGCCAGAGCACACAGCCTGGTGTGACGGGTCAGACGGCTGCACCAGGGTGTaGGGCGTCGCATCCAGGGGG +
Preference number: 4 (lower is better)
Translates to: REFVSCPPEHTAWCDGSDGCTRV*GVASRG
Trigger: CCCCCTGGATGCGACGCCCCACACCCTGGTGCAGCC...GTCTGACCCGTCACACCAGGCTGTGTGCTCTGGCGGGCAGGACACAAACTCCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR CCA 90 bp GAGGCTCTCTGGAGCGGGCAGTGTTGGGCTTGGACCGAGCCATCCCCACAGGTCGATCGGAAGCCAGCGTaGCGGGGATGGGCTGCACCA +
Preference number: 4 (lower is better)
Translates to: EALWSGQCWAWTEPSPQVDRKPA*RGWAAP
Trigger: TGGTGCAGCCCATCCCCGCCACGCTGGCTTCCGATC...GACCTGTGGGGATGGCTCGGTCCAAGCCCAACACTGCCCGCTCCAGAGAGCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp CCCTTGCACGGTGGTGCCCTCGGCCTTTGGTTGGGTCCTTCCCCTCCCAGTCCCCCGAGTAGGAGCGATTaGCGTCACCCTCCGCCTGGA +
Preference number: 4 (lower is better)
Translates to: PLHGGALGLWLGPSPPSPPSRSD*RHPPPG
Trigger: TCCAGGCGGAGGGTGACGCCAATCGCTCCTACTCGG...GGGACTGGGAGGGGAAGGACCCAACCAAAGGCCGAGGGCACCACCGTGCAAGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR CCA 90 bp CTCAGCGTCACCCCAGCGTTCCCAAACCCCCTTGCACGGTGGTGCCCTCGGCCTGGTCCAGGTGCCCATTaGGGGTCATGGGGATTGGGC +
Preference number: 4 (lower is better)
Translates to: LSVTPAFPNPLARWCPRPGPGAH*GSWGLG
Trigger: GCCCAATCCCCATGACCCCCAATGGGCACCTGGACC...AGGCCGAGGGCACCACCGTGCAAGGGGGTTTGGGAACGCTGGGGTGACGCTGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR CCA 90 bp CTCAGCGTCACCCCAGCGTTCCCAAACCCCCTTGCACGGTGGTGCCCTCGGCCTCACCCAGTGGGAGACTaGGGTCCAGGTGCCCATTGG +
Preference number: 4 (lower is better)
Translates to: LSVTPAFPNPLARWCPRPHPVGD*GPGAHW
Trigger: CCAATGGGCACCTGGACCCCAGTCTCCCACTGGGTG...AGGCCGAGGGCACCACCGTGCAAGGGGGTTTGGGAACGCTGGGGTGACGCTGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR CCA 90 bp ACCCCAGCGTTCCCAAACCCCCTTGCACGGTGGTGCCCTCGGCCTTTGGTTGGGGGACCCCCAAGATCTTaGCTCCCCCGGCTGAGGCCA +
Preference number: 4 (lower is better)
Translates to: TPAFPNPLARWCPRPLVGGPPRS*LPRLRP
Trigger: TGGCCTCAGCCGGGGGAGCCAAGATCTTGGGGGTCC...CCCAACCAAAGGCCGAGGGCACCACCGTGCAAGGGGGTTTGGGAACGCTGGGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 24 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR CCA 90 bp GAGGCTCTCTGGAGCGGGCAGTGTTGGGCTTGGACCGAGCCATCCCCACAGGTCGGACCCCCAAGATCTTaGCTCCCCCGGCTGAGGCCA +
Preference number: 4 (lower is better)
Translates to: EALWSGQCWAWTEPSPQVGPPRS*LPRLRP
Trigger: TGGCCTCAGCCGGGGGAGCCAAGATCTTGGGGGTCC...GACCTGTGGGGATGGCTCGGTCCAAGCCCAACACTGCCCGCTCCAGAGAGCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp CCCTTGCACGGTGGTGCCCTCGGCCTTTGGTTGGGTCCTTCCCCTCCCAGTCCCCCCAGGTTGCCCACCTaGGGCAAAGCTTGCACCACC +
Preference number: 4 (lower is better)
Translates to: PLHGGALGLWLGPSPPSPPRLPT*GKACTT
Trigger: GGTGGTGCAAGCTTTGCCCCAGGTGGGCAACCTGGG...GGGACTGGGAGGGGAAGGACCCAACCAAAGGCCGAGGGCACCACCGTGCAAGGG
67% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR CCA 90 bp GGCCAGAATCCCAGAGCATCAGACAAAAGCCCCGTCCAGGCCCTGGCCCACCTCCCAGGGCCCAGGCCATaGGCCATCTCCAGCTCGAGC +
Preference number: 4 (lower is better)
Translates to: GQNPRASDKSPVQALAHLPGPRP*AISSSS
Trigger: GCTCGAGCTGGAGATGGCCCATGGCCTGGGCCCTGG...GAGGTGGGCCAGGGCCTGGACGGGGCTTTTGTCTGATGCTCTGGGATTCTGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp GCCCCTCCAAGCAAGCCACTGCCGGCTCAGTCTCCCGCACCCTTCCTCTGCAGGCAGGTGGGCAGGCTGTaGGGTCCTCGAGACTCAGGT +
Preference number: 4 (lower is better)
Translates to: APPSKPLPAQSPAPFLCRQVGRL*GPRDSG
Trigger: ACCTGAGTCTCGAGGACCCCACAGCCTGCCCACCTG...CCTGCAGAGGAAGGGTGCGGGAGACTGAGCCGGCAGTGGCTTGCTTGGAGGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp GCACAGATGCCAAGGTGCCTGCCCACCACCGCTCTACGGAGCCCAGCAGACAGCGTCTTTGCGGCCAGGTaGGCAGGCTGTGGGGTCCTC +
Preference number: 4 (lower is better)
Translates to: AQMPRCLPTTALRSPADSVFAAR*AGCGVL
Trigger: GAGGACCCCACAGCCTGCCCACCTGGCCGCAAAGAC...GCTGTCTGCTGGGCTCCGTAGAGCGGTGGTGGGCAGGCACCTTGGCATCTGTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp GGGGACAGCACAGTGTCCAGGAACAGCCACAGCTCAGCGCCCATATGGGGGATATGCCCGCGGAGCTGCTaGGGCTGGCGTCCAGCGACG +
Preference number: 4 (lower is better)
Translates to: GDSTVSRNSHSSAPIWGICPRSC*GWRPAT
Trigger: CGTCGCTGGACGCCAGCCCCAGCAGCTCCGCGGGCA...TATCCCCCATATGGGCGCTGAGCTGTGGCTGTTCCTGGACACTGTGCTGTCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp GCACAGATGCCAAGGTGCCTGCCCACCACCGCTCTACGGAGCCCAGCAGACAGCCTGGAAGGGCCACCATaGGCCACGCAGGCCTGGCTA +
Preference number: 4 (lower is better)
Translates to: AQMPRCLPTTALRSPADSLEGPP*ATQAWL
Trigger: TAGCCAGGCCTGCGTGGCCCATGGTGGCCCTTCCAG...GCTGTCTGCTGGGCTCCGTAGAGCGGTGGTGGGCAGGCACCTTGGCATCTGTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp GAGGCTCTCTGGAGCGGGCAGTGTTGGGCTTGGACCGAGCCATCCCCACAGGTCGCGAAAGGCTGGGCATaGGGATGCGGCTGGACCCAG +
Preference number: 4 (lower is better)
Translates to: EALWSGQCWAWTEPSPQVAKGWA*GCGWTQ
Trigger: CTGGGTCCAGCCGCATCCCCATGCCCAGCCTTTCGC...GACCTGTGGGGATGGCTCGGTCCAAGCCCAACACTGCCCGCTCCAGAGAGCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp GAGGCTCTCTGGAGCGGGCAGTGTTGGGCTTGGACCGAGCCATCCCCACAGGTCGGCTGGGGTTGGCCCTaGAAGCGGAAGGCTCTGAGC +
Preference number: 4 (lower is better)
Translates to: EALWSGQCWAWTEPSPQVGWGWP*KRKALS
Trigger: GCTCAGAGCCTTCCGCTTCCAGGGCCAACCCCAGCC...GACCTGTGGGGATGGCTCGGTCCAAGCCCAACACTGCCCGCTCCAGAGAGCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp CAAACCCCCTTGCACGGTGGTGCCCTCGGCCTTTGGTTGGGTCCTTCCCCTCCCGGTGCCCTCGGCCTTTaGTTGGGTCCTTCCCCTCCC +
Preference number: 4 (lower is better)
Translates to: QTPLHGGALGLWLGPSPPGALGL*LGPSPP
Trigger: GGGAGGGGAAGGACCCAACCAAAGGCCGAGGGCACC...GGGAGGGGAAGGACCCAACCAAAGGCCGAGGGCACCACCGTGCAAGGGGGTTTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR TCA 90 bp GCCCCTCCAAGCAAGCCACTGCCGGCTCAGTCTCCCGCACCCTTCCTCTGCAGGGGTTGCACACCATCTTaGTGCACCAGTTCCGGGGGC +
Preference number: 4 (lower is better)
Translates to: APPSKPLPAQSPAPFLCRGCTPS*CTSSGG
Trigger: GCCCCCGGAACTGGTGCATCAAGATGGTGTGCAACC...CCTGCAGAGGAAGGGTGCGGGAGACTGAGCCGGCAGTGGCTTGCTTGGAGGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR TCA 90 bp CTCCAGTCTCAGCGTCACCCCAGCGTTCCCAAACCCCCTTGCACGGTGGTGCCCGCCGCAGGGCAGGCATaGAGCGCACCAGTTTCAGCA +
Preference number: 4 (lower is better)
Translates to: LQSQRHPSVPKPPCTVVPAAGQA*SAPVSA
Trigger: TGCTGAAACTGGTGCGCTTCATGCCTGCCCTGCGGC...GGGCACCACCGTGCAAGGGGGTTTGGGAACGCTGGGGTGACGCTGAGACTGGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR TCA 90 bp ACCCCAGCGTTCCCAAACCCCCTTGCACGGTGGTGCCCTCGGCCTTTGGTTGGGAGTCCGAGCGGTTGGTaGTGTTGCGGGTGTCCACGC +
Preference number: 4 (lower is better)
Translates to: TPAFPNPLARWCPRPLVGSPSGW*CCGCPR
Trigger: GCGTGGACACCCGCAACATCACCAACCGCTCGGACT...CCCAACCAAAGGCCGAGGGCACCACCGTGCAAGGGGGTTTGGGAACGCTGGGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR TCA 90 bp GGCCGTCTCTGCACAGATGCCAAGGTGCCTGCCCACCACCGCTCTACGGAGCCCCCGACAGGTTGTCGATaGTGGTCAGCTCCCCCTCCA +
Preference number: 4 (lower is better)
Translates to: GRLCTDAKVPAHHRSTEPPTGCR*WSAPPP
Trigger: TGGAGGGGGAGCTGACCATCATCGACAACCTGTCGG...GGGCTCCGTAGAGCGGTGGTGGGCAGGCACCTTGGCATCTGTGCAGAGACGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp ACCCCAGCGTTCCCAAACCCCCTTGCACGGTGGTGCCCTCGGCCTTTGGTTGGGCGCGGCGCTTGGCCTTaGGCAGGATGTGGCAGACAT +
Preference number: 4 (lower is better)
Translates to: TPAFPNPLARWCPRPLVGRGAWP*AGCGRH
Trigger: ATGTCTGCCACATCCTGCGCAAGGCCAAGCGCCGCG...CCCAACCAAAGGCCGAGGGCACCACCGTGCAAGGGGGTTTGGGAACGCTGGGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR GCA 90 bp AGTACAGCATCTGCAAACTCGTGGCCCCTGCAGCCTCTCCAGATCACTGCCACCTGGCCCAGGCCGCGCTaGGGCCCCATGGCCCGTAGT +
Preference number: 4 (lower is better)
Translates to: STASANSWPLQPLQITATWPRPR*GPMARS
Trigger: ACTACGGGCCATGGGGCCGCAGCGCGGCCTGGGCCA...GGTGGCAGTGATCTGGAGAGGCTGCAGGGGCCACGAGTTTGCAGATGCTGTACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp GAGGGCTGTGGCCCTGGCCAATCCAGTACGGGGGACCCTGCAGCCCGAGGCTTCGCGCCTCAGACCAAATaGCACCAGCTTCAGCACAGC +
Preference number: 4 (lower is better)
Translates to: EGCGPGQSSTGDPAARGFAPQTK*HQLQHS
Trigger: GCTGTGCTGAAGCTGGTGGCATTTGGTCTGAGGCGC...GAAGCCTCGGGCTGCAGGGTCCCCCGTACTGGATTGGCCAGGGCCACAGCCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR GCA 90 bp GCAGGGAGTTTGTGTCCTGCCCGCCAGAGCACACAGCCTGGTGTGACGGGTCAGGGCTGCTCAGGCAGCTaGGCTCGTCGTGGGTGCAGT +
Preference number: 4 (lower is better)
Translates to: AGSLCPARQSTQPGVTGQGCSGS*ARRGCS
Trigger: ACTGCACCCACGACGAGCGCAGCTGCCTGAGCAGCC...CTGACCCGTCACACCAGGCTGTGTGCTCTGGCGGGCAGGACACAAACTCCCTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR GCA 90 bp GGCCGTCTCTGCACAGATGCCAAGGTGCCTGCCCACCACCGCTCTACGGAGCCCAGCGGCGACACAAACTaGAGGCTGCTCAGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: GRLCTDAKVPAHHRSTEPSGDTN*RLLRQL
Trigger: CAGCTGCCTGAGCAGCCTGCAGTTTGTGTCGCCGCT...GGGCTCCGTAGAGCGGTGGTGGGCAGGCACCTTGGCATCTGTGCAGAGACGGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp CTCAGCGTCACCCCAGCGTTCCCAAACCCCCTTGCACGGTGGTGCCCTCGGCCTCGTGGTGACACTTCTTaGAGCCGGCAGGCGAGGAGT +
Preference number: 4 (lower is better)
Translates to: LSVTPAFPNPLARWCPRPRGDTS*SRQARS
Trigger: ACTCCTCGCCTGCCGGCTGCAAGAAGTGTCACCACG...AGGCCGAGGGCACCACCGTGCAAGGGGGTTTGGGAACGCTGGGGTGACGCTGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR GCA 90 bp ATCACAGGCCTCTTCCAGACCCGCCTTGGGGTCCTCCCCACACTCTGCTGTCCCCCCCTTGCACGGTGGTaGCCTCGGCCTTTGGTTGGG +
Preference number: 4 (lower is better)
Translates to: ITGLFQTRLGVLPTLCCPPLARW*PRPLVG
Trigger: CCCAACCAAAGGCCGAGGGCACCACCGTGCAAGGGG...GGGACAGCAGAGTGTGGGGAGGACCCCAAGGCGGGTCTGGAAGAGGCCTGTGAT
66% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR GCA 90 bp ATCACAGGCCTCTTCCAGACCCGCCTTGGGGTCCTCCCCACACTCTGCTGTCCCCTCCATCCGCCCCAGTaGCACCTCCCCCTCCAGTCT +
Preference number: 4 (lower is better)
Translates to: ITGLFQTRLGVLPTLCCPLHPPQ*HLPLQS
Trigger: AGACTGGAGGGGGAGGTGGCACTGGGGCGGATGGAG...GGGACAGCAGAGTGTGGGGAGGACCCCAAGGCGGGTCTGGAAGAGGCCTGTGAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR CCA 90 bp TCACCCAGTGAATCAACTGCACTCACTGTGGGAGCCGGCCCGGCCCCATTTCCCCTCCGTGGTGACTCCTaGCTCAGCGGCTGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: SPSESTALTVGAGPAPFPLRGDS*LSGWGC
Trigger: GCAGCCCCAGCCGCTGAGCCAGGAGTCACCACGGAG...GGGAAATGGGGCCGGGCCGGCTCCCACAGTGAGTGCAGTTGATTCACTGGGTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR CCA 90 bp GGCCGTCTCTGCACAGATGCCAAGGTGCCTGCCCACCACCGCTCTACGGAGCCCCGCCAGGTCTGGGTGTaGGACATGAGGATCAGCTCC +
Preference number: 4 (lower is better)
Translates to: GRLCTDAKVPAHHRSTEPRQVWV*DMRISS
Trigger: GGAGCTGATCCTCATGTCCCACACCCAGACCTGGCG...GGGCTCCGTAGAGCGGTGGTGGGCAGGCACCTTGGCATCTGTGCAGAGACGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp GCCCCTCCAAGCAAGCCACTGCCGGCTCAGTCTCCCGCACCCTTCCTCTGCAGGAGTTCCGGGGGCTGGTaGTCTGTCGCAGGCAGAAGA +
Preference number: 4 (lower is better)
Translates to: APPSKPLPAQSPAPFLCRSSGGW*SVAGRR
Trigger: TCTTCTGCCTGCGACAGACCACCAGCCCCCGGAACT...CCTGCAGAGGAAGGGTGCGGGAGACTGAGCCGGCAGTGGCTTGCTTGGAGGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp CTCCAGTCTCAGCGTCACCCCAGCGTTCCCAAACCCCCTTGCACGGTGGTGCCCCTCCGGCTGGTAGTATaGGGGCAAGGCCACATCCCC +
Preference number: 4 (lower is better)
Translates to: LQSQRHPSVPKPPCTVVPLRLVV*GQGHIP
Trigger: GGGGATGTGGCCTTGCCCCCATACTACCAGCCGGAG...GGGCACCACCGTGCAAGGGGGTTTGGGAACGCTGGGGTGACGCTGAGACTGGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR CCA 90 bp GAGGCTCTCTGGAGCGGGCAGTGTTGGGCTTGGACCGAGCCATCCCCACAGGTCTTGATGGCACCCTTGTaGGGGTTGGCGCTGCCCGTG +
Preference number: 4 (lower is better)
Translates to: EALWSGQCWAWTEPSPQVLMAPL*GLALPV
Trigger: CACGGGCAGCGCCAACCCCCACAAGGGTGCCATCAA...GACCTGTGGGGATGGCTCGGTCCAAGCCCAACACTGCCCGCTCCAGAGAGCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp TTCCCAAACCCCCTTGCACGGTGGTGCCCTCGGCCTTTGGTTGGGTCCTTCCCCCAGGCTCGGCGTAGCTaGCCACCGTGCTGGAGGACA +
Preference number: 4 (lower is better)
Translates to: FPNPLARWCPRPLVGSFPQARRS*PPCWRT
Trigger: TGTCCTCCAGCACGGTGGCCAGCTACGCCGAGCCTG...GGGGAAGGACCCAACCAAAGGCCGAGGGCACCACCGTGCAAGGGGGTTTGGGAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR CCA 90 bp GGGGACAGCACAGTGTCCAGGAACAGCCACAGCTCAGCGCCCATATGGGGGATACCAGGGCGCGGCGCTTaGCCTTGCGCAGGATGTGGC +
Preference number: 4 (lower is better)
Translates to: GDSTVSRNSHSSAPIWGIPGRGA*PCAGCG
Trigger: GCCACATCCTGCGCAAGGCCAAGCGCCGCGCCCTGG...TATCCCCCATATGGGCGCTGAGCTGTGGCTGTTCCTGGACACTGTGCTGTCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp CCACCCCTGCCTAGAATTCGGTCAGAGCTGCTTTGCCTTGAACCTACTGGGGCGCGGGGCTCCTTGGCGTaGGGCCCAGGTTTGGCGGGG +
Preference number: 4 (lower is better)
Translates to: PPLPRIRSELLCLEPTGARGSLA*GPGLAG
Trigger: CCCCGCCAAACCTGGGCCCCACGCCAAGGAGCCCCG...CGCCCCAGTAGGTTCAAGGCAAAGCAGCTCTGACCGAATTCTAGGCAGGGGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp CTGAATTGCACCTCTTCTCCAGGGCCTGGTGCCCTCAGAGGCCTGAGGGTCCTCAGTGCCGGGGCTCCTTaGCGTGGGGCCCAGGTTTGG +
Preference number: 4 (lower is better)
Translates to: LNCTSSPGPGALRGLRVLSAGAP*RGAQVW
Trigger: CCAAACCTGGGCCCCACGCCAAGGAGCCCCGGCACT...GAGGACCCTCAGGCCTCTGAGGGCACCAGGCCCTGGAGAAGAGGTGCAATTCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp GCAGGGAGTTTGTGTCCTGCCCGCCAGAGCACACAGCCTGGTGTGACGGGTCAGGATCGGAAGCCAGCGTaGCGGGGATGGGCTGCACCA +
Preference number: 4 (lower is better)
Translates to: AGSLCPARQSTQPGVTGQDRKPA*RGWAAP
Trigger: TGGTGCAGCCCATCCCCGCCACGCTGGCTTCCGATC...CTGACCCGTCACACCAGGCTGTGTGCTCTGGCGGGCAGGACACAAACTCCCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR CCA 90 bp CCACCCCTGCCTAGAATTCGGTCAGAGCTGCTTTGCCTTGAACCTACTGGGGCGGAGCCCGAGCCCTCCTaGCCCGAGTCGGTGCTGCCC +
Preference number: 4 (lower is better)
Translates to: PPLPRIRSELLCLEPTGAEPEPS*PESVLP
Trigger: GGGCAGCACCGACTCGGGCCAGGAGGGCTCGGGCTC...CGCCCCAGTAGGTTCAAGGCAAAGCAGCTCTGACCGAATTCTAGGCAGGGGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp TCACCCAGTGAATCAACTGCACTCACTGTGGGAGCCGGCCCGGCCCCATTTCCCCGATGCCGCGCAGCTTaGCTCGCGTCTCCCGCCACA +
Preference number: 4 (lower is better)
Translates to: SPSESTALTVGAGPAPFPRCRAA*LASPAT
Trigger: TGTGGCGGGAGACGCGAGCCAAGCTGCGCGGCATCG...GGGAAATGGGGCCGGGCCGGCTCCCACAGTGAGTGCAGTTGATTCACTGGGTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR CCA 90 bp CTGAATTGCACCTCTTCTCCAGGGCCTGGTGCCCTCAGAGGCCTGAGGGTCCTCCGATGCCGCGCAGCTTaGCTCGCGTCTCCCGCCACA +
Preference number: 4 (lower is better)
Translates to: LNCTSSPGPGALRGLRVLRCRAA*LASPAT
Trigger: TGTGGCGGGAGACGCGAGCCAAGCTGCGCGGCATCG...GAGGACCCTCAGGCCTCTGAGGGCACCAGGCCCTGGAGAAGAGGTGCAATTCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp GCACAGATGCCAAGGTGCCTGCCCACCACCGCTCTACGGAGCCCAGCAGACAGCGGTCCAGGTGCCCATTaGGGGTCATGGGGATTGGGC +
Preference number: 4 (lower is better)
Translates to: AQMPRCLPTTALRSPADSGPGAH*GSWGLG
Trigger: GCCCAATCCCCATGACCCCCAATGGGCACCTGGACC...GCTGTCTGCTGGGCTCCGTAGAGCGGTGGTGGGCAGGCACCTTGGCATCTGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp ATCAAGCCCCCACTCACACCCACCCAGAGCACCCAGGGTGTCCTCCCCACTGCCAGGAGCTCCGGGAGCTaGACAGGGAGCGCTGGTCAT +
Preference number: 4 (lower is better)
Translates to: IKPPLTPTQSTQGVLPTARSSGS*TGSAGH
Trigger: ATGACCAGCGCTCCCTGTCCAGCTCCCGGAGCTCCT...GGCAGTGGGGAGGACACCCTGGGTGCTCTGGGTGGGTGTGAGTGGGGGCTTGAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR CCA 90 bp GTGTCCTGCCCGCCAGAGCACACAGCCTGGTGTGACGGGTCAGACAGTCACCCAAATGTGGTGGGCGTGTaGGGTGTGCAGGGGTGCGGC +
Preference number: 4 (lower is better)
Translates to: VSCPPEHTAWCDGSDSHPNVVGV*GVQGCG
Trigger: GCCGCACCCCTGCACACCCCACACGCCCACCACATT...TGGGTGACTGTCTGACCCGTCACACCAGGCTGTGTGCTCTGGCGGGCAGGACAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR CCA 90 bp GGTCAGAGCTGCTTTGCCTTGAACCTACTGGGGCGGGGGCATAGTTGCTCAGGAAGCGTCCGGCGGTGGTaGCGGTGGCGGTGCGCCAGA +
Preference number: 4 (lower is better)
Translates to: GQSCFALNLLGRGHSCSGSVRRW*RWRCAR
Trigger: TCTGGCGCACCGCCACCGCCACCACCGCCGGACGCT...TCCTGAGCAACTATGCCCCCGCCCCAGTAGGTTCAAGGCAAAGCAGCTCTGACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp CCAGTGAATCAACTGCACTCACTGTGGGAGCCGGCCCGGCCCCATTTCCCCACCGGACCCAGCGGTAGTTaGCGGCCATGCAGTCCGAGC +
Preference number: 4 (lower is better)
Translates to: PVNQLHSLWEPARPHFPTGPSGS*RPCSPS
Trigger: GCTCGGACTGCATGGCCGCCAACTACCGCTGGGTCC...GGTGGGGAAATGGGGCCGGGCCGGCTCCCACAGTGAGTGCAGTTGATTCACTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR CCA 90 bp GCACAGATGCCAAGGTGCCTGCCCACCACCGCTCTACGGAGCCCAGCAGACAGCCCCAGGTTGCCCACCTaGGGCAAAGCTTGCACCACC +
Preference number: 4 (lower is better)
Translates to: AQMPRCLPTTALRSPADSPRLPT*GKACTT
Trigger: GGTGGTGCAAGCTTTGCCCCAGGTGGGCAACCTGGG...GCTGTCTGCTGGGCTCCGTAGAGCGGTGGTGGGCAGGCACCTTGGCATCTGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp GGATCACAGGCCTCTTCCAGACCCGCCTTGGGGTCCTCCCCACACTCTGCTGTCGTCTTTGCGGCCAGGTaGGCAGGCTGTGGGGTCCTC +
Preference number: 4 (lower is better)
Translates to: GSQASSRPALGSSPHSAVVFAAR*AGCGVL
Trigger: GAGGACCCCACAGCCTGCCCACCTGGCCGCAAAGAC...GACAGCAGAGTGTGGGGAGGACCCCAAGGCGGGTCTGGAAGAGGCCTGTGATCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR CCA 90 bp GTGTCCTGCCCGCCAGAGCACACAGCCTGGTGTGACGGGTCAGACAGTCACCCATGGGCAGGAGAGGGCTaGAGGCATCCGGGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: VSCPPEHTAWCDGSDSHPWAGEG*RHPGRR
Trigger: CCTTCTCCCCGGATGCCTCCAGCCCTCTCCTGCCCA...TGGGTGACTGTCTGACCCGTCACACCAGGCTGTGTGCTCTGGCGGGCAGGACAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR CCA 90 bp GGCCAGAATCCCAGAGCATCAGACAAAAGCCCCGTCCAGGCCCTGGCCCACCTCTGGGCAGGAGAGGGCTaGAGGCATCCGGGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: GQNPRASDKSPVQALAHLWAGEG*RHPGRR
Trigger: CCTTCTCCCCGGATGCCTCCAGCCCTCTCCTGCCCA...GAGGTGGGCCAGGGCCTGGACGGGGCTTTTGTCTGATGCTCTGGGATTCTGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp CTCAGCGTCACCCCAGCGTTCCCAAACCCCCTTGCACGGTGGTGCCCTCGGCCTCCTGCAGCGCAATCTTaGGGAGGGTTCCAGTGCCAG +
Preference number: 4 (lower is better)
Translates to: LSVTPAFPNPLARWCPRPPAAQS*GGFQCQ
Trigger: CTGGCACTGGAACCCTCCCCAAGATTGCGCTGCAGG...AGGCCGAGGGCACCACCGTGCAAGGGGGTTTGGGAACGCTGGGGTGACGCTGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR CCA 90 bp AGTACAGCATCTGCAAACTCGTGGCCCCTGCAGCCTCTCCAGATCACTGCCACCGGGTGCAGCCCGGGCTaGTGGAGCCCCCGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: STASANSWPLQPLQITATGCSPG*WSPRCC
Trigger: ACAGCAGCGGGGGCTCCACCAGCCCGGGCTGCACCC...GGTGGCAGTGATCTGGAGAGGCTGCAGGGGCCACGAGTTTGCAGATGCTGTACT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp CTGAATTGCACCTCTTCTCCAGGGCCTGGTGCCCTCAGAGGCCTGAGGGTCCTCGGGTCCATGGAGTCGTaGTGGGTGCAGCCCGGGCTG +
Preference number: 4 (lower is better)
Translates to: LNCTSSPGPGALRGLRVLGSMES*WVQPGL
Trigger: CAGCCCGGGCTGCACCCACCACGACTCCATGGACCC...GAGGACCCTCAGGCCTCTGAGGGCACCAGGCCCTGGAGAAGAGGTGCAATTCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp GGCCAGAATCCCAGAGCATCAGACAAAAGCCCCGTCCAGGCCCTGGCCCACCTCCGTCCGAGGGGTCCATaGAGTCGTGGTGGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: GQNPRASDKSPVQALAHLRPRGP*SRGGCS
Trigger: GCTGCACCCACCACGACTCCATGGACCCCTCGGACG...GAGGTGGGCCAGGGCCTGGACGGGGCTTTTGTCTGATGCTCTGGGATTCTGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp GAGGCTCTCTGGAGCGGGCAGTGTTGGGCTTGGACCGAGCCATCCCCACAGGTCGCCCTGGGGTGGGTCTaGCCAGAATCCCAGAGCATC +
Preference number: 4 (lower is better)
Translates to: EALWSGQCWAWTEPSPQVALGWV*PESQSI
Trigger: GATGCTCTGGGATTCTGGCCAGACCCACCCCAGGGC...GACCTGTGGGGATGGCTCGGTCCAAGCCCAACACTGCCCGCTCCAGAGAGCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp GGCCGTCTCTGCACAGATGCCAAGGTGCCTGCCCACCACCGCTCTACGGAGCCCACATGTGCCCTGGGGTaGGTCTGGCCAGAATCCCAG +
Preference number: 4 (lower is better)
Translates to: GRLCTDAKVPAHHRSTEPTCALG*VWPESQ
Trigger: CTGGGATTCTGGCCAGACCCACCCCAGGGCACATGT...GGGCTCCGTAGAGCGGTGGTGGGCAGGCACCTTGGCATCTGTGCAGAGACGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp GGCCGTCTCTGCACAGATGCCAAGGTGCCTGCCCACCACCGCTCTACGGAGCCCGCAGGACATGTGCCCTaGGGTGGGTCTGGCCAGAAT +
Preference number: 4 (lower is better)
Translates to: GRLCTDAKVPAHHRSTEPAGHVP*GGSGQN
Trigger: ATTCTGGCCAGACCCACCCCAGGGCACATGTCCTGC...GGGCTCCGTAGAGCGGTGGTGGGCAGGCACCTTGGCATCTGTGCAGAGACGGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp GCCCCTCCAAGCAAGCCACTGCCGGCTCAGTCTCCCGCACCCTTCCTCTGCAGGCTGCTCTGTGGACCCTaGAGCCTTCGCTCATGCCCA +
Preference number: 4 (lower is better)
Translates to: APPSKPLPAQSPAPFLCRLLCGP*SLRSCP
Trigger: TGGGCATGAGCGAAGGCTCCAGGGTCCACAGAGCAG...CCTGCAGAGGAAGGGTGCGGGAGACTGAGCCGGCAGTGGCTTGCTTGGAGGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp GCCCCTCCAAGCAAGCCACTGCCGGCTCAGTCTCCCGCACCCTTCCTCTGCAGGACAAGGTCAAGTGCCTaGGATCGGCAGGTGGGGCCT +
Preference number: 4 (lower is better)
Translates to: APPSKPLPAQSPAPFLCRTRSSA*DRQVGP
Trigger: AGGCCCCACCTGCCGATCCCAGGCACTTGACCTTGT...CCTGCAGAGGAAGGGTGCGGGAGACTGAGCCGGCAGTGGCTTGCTTGGAGGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp GGCCAGAATCCCAGAGCATCAGACAAAAGCCCCGTCCAGGCCCTGGCCCACCTCGGCTGGGGTTGGCCCTaGAAGCGGAAGGCTCTGAGC +
Preference number: 4 (lower is better)
Translates to: GQNPRASDKSPVQALAHLGWGWP*KRKALS
Trigger: GCTCAGAGCCTTCCGCTTCCAGGGCCAACCCCAGCC...GAGGTGGGCCAGGGCCTGGACGGGGCTTTTGTCTGATGCTCTGGGATTCTGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp GGATCACAGGCCTCTTCCAGACCCGCCTTGGGGTCCTCCCCACACTCTGCTGTCGGAGGGCTGTGGCCCTaGCCAATCCAGTACGGGGGA +
Preference number: 4 (lower is better)
Translates to: GSQASSRPALGSSPHSAVGGLWP*PIQYGG
Trigger: TCCCCCGTACTGGATTGGCCAGGGCCACAGCCCTCC...GACAGCAGAGTGTGGGGAGGACCCCAAGGCGGGTCTGGAAGAGGCCTGTGATCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR CCA 90 bp GCAGGGAGTTTGTGTCCTGCCCGCCAGAGCACACAGCCTGGTGTGACGGGTCAGCAACTGCACTCACTGTaGGAGCCGGCCCGGCCCCAT +
Preference number: 4 (lower is better)
Translates to: AGSLCPARQSTQPGVTGQQLHSL*EPARPH
Trigger: ATGGGGCCGGGCCGGCTCCCACAGTGAGTGCAGTTG...CTGACCCGTCACACCAGGCTGTGTGCTCTGGCGGGCAGGACACAAACTCCCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401624.5
3UTR CAA 72 bp CCAGTCTCAGCGTCACCCCAGCGTTCCCAAACCCCCTaGCACGGTGGTGCCCTCGGCCTTTGGTTGGGTCCT +
Preference number: 4 (lower is better)
Translates to: PVSASPQRSQTP*HGGALGLWLGP
Trigger: AGGACCCAACCAAAGGCCGAGGGCACCACCGTGCAAGGGGGTTTGGGAACGCTGGGGTGACGCTGAGACTGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR TCA 90 bp GAATTCGGTCAGAGCTGCTTTGCCTTGAACCTACTGGGGCGGGGGCATAGTTGCAGAGGCCGCTGGCATTaGGGTCCTGGCGCCCCGCCC +
Preference number: 4 (lower is better)
Translates to: EFGQSCFALNLLGRGHSCRGRWH*GPGAPP
Trigger: GGGCGGGGCGCCAGGACCTCAATGCCAGCGGCCTCT...GCAACTATGCCCCCGCCCCAGTAGGTTCAAGGCAAAGCAGCTCTGACCGAATTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR TCA 90 bp GGCCAGAATCCCAGAGCATCAGACAAAAGCCCCGTCCAGGCCCTGGCCCACCTCGCCGCAGGGCAGGCATaGAGCGCACCAGTTTCAGCA +
Preference number: 4 (lower is better)
Translates to: GQNPRASDKSPVQALAHLAAGQA*SAPVSA
Trigger: TGCTGAAACTGGTGCGCTTCATGCCTGCCCTGCGGC...GAGGTGGGCCAGGGCCTGGACGGGGCTTTTGTCTGATGCTCTGGGATTCTGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR TCA 90 bp AGTCACCCAGTGAATCAACTGCACTCACTGTGGGAGCCGGCCCGGCCCCATTTCCTTGGCTCCCCCGGCTaGGGCCAGGGACACCACGAT +
Preference number: 4 (lower is better)
Translates to: SHPVNQLHSLWEPARPHFLGSPG*GQGHHD
Trigger: ATCGTGGTGTCCCTGGCCTCAGCCGGGGGAGCCAAG...GAAATGGGGCCGGGCCGGCTCCCACAGTGAGTGCAGTTGATTCACTGGGTGACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR TCA 90 bp TTCCCAAACCCCCTTGCACGGTGGTGCCCTCGGCCTTTGGTTGGGTCCTTCCCCTGGGCAGGGCCGCATTaGTCTCGATCTCCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: FPNPLARWCPRPLVGSFPWAGPH*SRSPPG
Trigger: CCCTGGAGGAGATCGAGATCAATGCGGCCCTGCCCA...GGGGAAGGACCCAACCAAAGGCCGAGGGCACCACCGTGCAAGGGGGTTTGGGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR TCA 90 bp CAAACCCCCTTGCACGGTGGTGCCCTCGGCCTTTGGTTGGGTCCTTCCCCTCCCCCGACAGGTTGTCGATaGTGGTCAGCTCCCCCTCCA +
Preference number: 4 (lower is better)
Translates to: QTPLHGGALGLWLGPSPPPTGCR*WSAPPP
Trigger: TGGAGGGGGAGCTGACCATCATCGACAACCTGTCGG...GGGAGGGGAAGGACCCAACCAAAGGCCGAGGGCACCACCGTGCAAGGGGGTTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR TCA 90 bp GCAGGGAGTTTGTGTCCTGCCCGCCAGAGCACACAGCCTGGTGTGACGGGTCAGGCACACAGCCTGGTGTaGCGGGTCAGACAGTCACCC +
Preference number: 4 (lower is better)
Translates to: AGSLCPARQSTQPGVTGQAHSLV*RVRQSP
Trigger: GGGTGACTGTCTGACCCGTCACACCAGGCTGTGTGC...CTGACCCGTCACACCAGGCTGTGTGCTCTGGCGGGCAGGACACAAACTCCCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR GCA 90 bp CCTCCCACCTCCATTCCTAGTAATCAAGCCCCCACTCACACCCACCCAGAGCACCTCCGGGGTCCGGGCTaGTCCGTGGTGACTCCTGGC +
Preference number: 4 (lower is better)
Translates to: PPTSIPSNQAPTHTHPEHLRGPG*SVVTPG
Trigger: GCCAGGAGTCACCACGGAGCAGCCCGGACCCCGGAG...GTGCTCTGGGTGGGTGTGAGTGGGGGCTTGATTACTAGGAATGGAGGTGGGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR GCA 90 bp GGTCAGAGCTGCTTTGCCTTGAACCTACTGGGGCGGGGGCATAGTTGCTCAGGAGTGGCGGGGATGGGCTaGACCAGGGTGTGGGGCGTC +
Preference number: 4 (lower is better)
Translates to: GQSCFALNLLGRGHSCSGVAGMG*TRVWGV
Trigger: GACGCCCCACACCCTGGTGCAGCCCATCCCCGCCAC...TCCTGAGCAACTATGCCCCCGCCCCAGTAGGTTCAAGGCAAAGCAGCTCTGACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp GCCCCTCCAAGCAAGCCACTGCCGGCTCAGTCTCCCGCACCCTTCCTCTGCAGGAGACGTCGATCATCTTaGGGACGCGGAAGCACAGGG +
Preference number: 4 (lower is better)
Translates to: APPSKPLPAQSPAPFLCRRRRSS*GRGSTG
Trigger: CCCTGTGCTTCCGCGTCCGCAAGATGATCGACGTCT...CCTGCAGAGGAAGGGTGCGGGAGACTGAGCCGGCAGTGGCTTGCTTGGAGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp GGCCGTCTCTGCACAGATGCCAAGGTGCCTGCCCACCACCGCTCTACGGAGCCCGAAAGATGCGTTCGGTaGTGCCGGCCTCGATCTGAG +
Preference number: 4 (lower is better)
Translates to: GRLCTDAKVPAHHRSTEPERCVR*CRPRSE
Trigger: CTCAGATCGAGGCCGGCAGCACCGAACGCATCTTTC...GGGCTCCGTAGAGCGGTGGTGGGCAGGCACCTTGGCATCTGTGCAGAGACGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp GGCCGTCTCTGCACAGATGCCAAGGTGCCTGCCCACCACCGCTCTACGGAGCCCGCGCCTCAGACCAAATaGCACCAGCTTCAGCACAGC +
Preference number: 4 (lower is better)
Translates to: GRLCTDAKVPAHHRSTEPAPQTK*HQLQHS
Trigger: GCTGTGCTGAAGCTGGTGGCATTTGGTCTGAGGCGC...GGGCTCCGTAGAGCGGTGGTGGGCAGGCACCTTGGCATCTGTGCAGAGACGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp CGGGTCAGACAGTCACCCAGTGAATCAACTGCACTCACTGTGGGAGCCGGCCCGTGCGCTCGTCGTGGGTaGAGTCCCGCAGCGTGTCCT +
Preference number: 4 (lower is better)
Translates to: RVRQSPSESTALTVGAGPCARRG*SPAACP
Trigger: AGGACACGCTGCGGGACTGCACCCACGACGAGCGCA...CGGGCCGGCTCCCACAGTGAGTGCAGTTGATTCACTGGGTGACTGTCTGACCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR GCA 90 bp TTCCCAAACCCCCTTGCACGGTGGTGCCCTCGGCCTTTGGTTGGGTCCTTCCCCGATGCCCAGGAGCCCTaGAGCGCAATCTTGGGGAGG +
Preference number: 4 (lower is better)
Translates to: FPNPLARWCPRPLVGSFPDAQEP*SAILGR
Trigger: CCTCCCCAAGATTGCGCTGCAGGGCTCCTGGGCATC...GGGGAAGGACCCAACCAAAGGCCGAGGGCACCACCGTGCAAGGGGGTTTGGGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR GCA 90 bp TGGACCCTGGAGCCTTCGCTCATGCCCATCCCTTTGCCTAGAACACCTGCCTCGTCCTCGAGCGTGGTCTaGAGGCTGCCCGCGGAGCTG +
Preference number: 4 (lower is better)
Translates to: WTLEPSLMPIPLPRTPASSSSVV*RLPAEL
Trigger: CAGCTCCGCGGGCAGCCTGCAGACCACGCTCGAGGA...CGAGGCAGGTGTTCTAGGCAAAGGGATGGGCATGAGCGAAGGCTCCAGGGTCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp GCCATGGGCCAGCAGGTACCAGCGCCATCAGCAACTAGGAGGGAAGTTCATTCACCCCGCTGCTGTGGCTaGGCTGATGCGCCCGCAGCC +
Preference number: 4 (lower is better)
Translates to: AMGQQVPAPSATRREVHSPRCCG*ADAPAA
Trigger: GGCTGCGGGCGCATCAGCGCAGCCACAGCAGCGGGG...TGAATGAACTTCCCTCCTAGTTGCTGATGGCGCTGGTACCTGCTGGCCCATGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp GAATTCGGTCAGAGCTGCTTTGCCTTGAACCTACTGGGGCGGGGGCATAGTTGCCCCCGCTGCTGTGGCTaGGCTGATGCGCCCGCAGCC +
Preference number: 4 (lower is better)
Translates to: EFGQSCFALNLLGRGHSCPRCCG*ADAPAA
Trigger: GGCTGCGGGCGCATCAGCGCAGCCACAGCAGCGGGG...GCAACTATGCCCCCGCCCCAGTAGGTTCAAGGCAAAGCAGCTCTGACCGAATTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp GCACAGATGCCAAGGTGCCTGCCCACCACCGCTCTACGGAGCCCAGCAGACAGCAGGTGCCCCCACCCCTaGCTAGAATTCGGTCAGAGC +
Preference number: 4 (lower is better)
Translates to: AQMPRCLPTTALRSPADSRCPHP*LEFGQS
Trigger: GCTCTGACCGAATTCTAGGCAGGGGTGGGGGCACCT...GCTGTCTGCTGGGCTCCGTAGAGCGGTGGTGGGCAGGCACCTTGGCATCTGTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp GCACAGATGCCAAGGTGCCTGCCCACCACCGCTCTACGGAGCCCAGCAGACAGCGCACAGATGCCAAGGTaGCTGCCCACCACCGCTCTA +
Preference number: 4 (lower is better)
Translates to: AQMPRCLPTTALRSPADSAQMPR*LPTTAL
Trigger: TAGAGCGGTGGTGGGCAGGCACCTTGGCATCTGTGC...GCTGTCTGCTGGGCTCCGTAGAGCGGTGGTGGGCAGGCACCTTGGCATCTGTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp GGCCGTCTCTGCACAGATGCCAAGGTGCCTGCCCACCACCGCTCTACGGAGCCCAGACTGGGCCGTCTCTaGACAGATGCCAAGGTGCCT +
Preference number: 4 (lower is better)
Translates to: GRLCTDAKVPAHHRSTEPRLGRL*TDAKVP
Trigger: AGGCACCTTGGCATCTGTGCAGAGACGGCCCAGTCT...GGGCTCCGTAGAGCGGTGGTGGGCAGGCACCTTGGCATCTGTGCAGAGACGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp CTCCAGTCTCAGCGTCACCCCAGCGTTCCCAAACCCCCTTGCACGGTGGTGCCCGCCTGGCTTAGATCCTaGCCCTTGCCCACAGACCAG +
Preference number: 4 (lower is better)
Translates to: LQSQRHPSVPKPPCTVVPAWLRS*PLPTDQ
Trigger: CTGGTCTGTGGGCAAGGGGCAGGATCTAAGCCAGGC...GGGCACCACCGTGCAAGGGGGTTTGGGAACGCTGGGGTGACGCTGAGACTGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR CCA 90 bp GCACAGATGCCAAGGTGCCTGCCCACCACCGCTCTACGGAGCCCAGCAGACAGCAGTTCCGGGGGCTGGTaGTCTGTCGCAGGCAGAAGA +
Preference number: 4 (lower is better)
Translates to: AQMPRCLPTTALRSPADSSSGGW*SVAGRR
Trigger: TCTTCTGCCTGCGACAGACCACCAGCCCCCGGAACT...GCTGTCTGCTGGGCTCCGTAGAGCGGTGGTGGGCAGGCACCTTGGCATCTGTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp GCCCCTCCAAGCAAGCCACTGCCGGCTCAGTCTCCCGCACCCTTCCTCTGCAGGGGACATTCCCCAGCATaGGCAGTGTGTCCAGGAGCA +
Preference number: 4 (lower is better)
Translates to: APPSKPLPAQSPAPFLCRGHSPA*AVCPGA
Trigger: TGCTCCTGGACACACTGCCCATGCTGGGGAATGTCC...CCTGCAGAGGAAGGGTGCGGGAGACTGAGCCGGCAGTGGCTTGCTTGGAGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp GGGGACAGCACAGTGTCCAGGAACAGCCACAGCTCAGCGCCCATATGGGGGATAAGTGCCGGGGCTCCTTaGCGTGGGGCCCAGGTTTGG +
Preference number: 4 (lower is better)
Translates to: GDSTVSRNSHSSAPIWGISAGAP*RGAQVW
Trigger: CCAAACCTGGGCCCCACGCCAAGGAGCCCCGGCACT...TATCCCCCATATGGGCGCTGAGCTGTGGCTGTTCCTGGACACTGTGCTGTCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp CACCCCCACAGCGGAGCCCTCAGTGCTTCAGACCTCTGTGTGCCCGTGGGTAGGGGGGGTCATGGGGATTaGGCAGAGCTTGGGATCTCC +
Preference number: 4 (lower is better)
Translates to: HPHSGALSASDLCVPVGRGGHGD*AELGIS
Trigger: GGAGATCCCAAGCTCTGCCCAATCCCCATGACCCCC...CCTACCCACGGGCACACAGAGGTCTGAAGCACTGAGGGCTCCGCTGTGGGGGTG
64% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR CCA 90 bp CGTTCCCAAACCCCCTTGCACGGTGGTGCCCTCGGCCTTTGGTTGGGTCCTTCCCAGGTGGGCAGGCTGTaGGGTCCTCGAGACTCAGGT +
Preference number: 4 (lower is better)
Translates to: RSQTPLHGGALGLWLGPSQVGRL*GPRDSG
Trigger: ACCTGAGTCTCGAGGACCCCACAGCCTGCCCACCTG...GGAAGGACCCAACCAAAGGCCGAGGGCACCACCGTGCAAGGGGGTTTGGGAACG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR CCA 90 bp ACCCCAGCGTTCCCAAACCCCCTTGCACGGTGGTGCCCTCGGCCTTTGGTTGGGCGGGGAGAAGGGACTTaGGGGTGCTTGACTGCTGTC +
Preference number: 4 (lower is better)
Translates to: TPAFPNPLARWCPRPLVGRGEGT*GCLTAV
Trigger: GACAGCAGTCAAGCACCCCCAAGTCCCTTCTCCCCG...CCCAACCAAAGGCCGAGGGCACCACCGTGCAAGGGGGTTTGGGAACGCTGGGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR CCA 90 bp GAGGCTCTCTGGAGCGGGCAGTGTTGGGCTTGGACCGAGCCATCCCCACAGGTCCGGGGAGAAGGGACTTaGGGGTGCTTGACTGCTGTC +
Preference number: 4 (lower is better)
Translates to: EALWSGQCWAWTEPSPQVRGEGT*GCLTAV
Trigger: GACAGCAGTCAAGCACCCCCAAGTCCCTTCTCCCCG...GACCTGTGGGGATGGCTCGGTCCAAGCCCAACACTGCCCGCTCCAGAGAGCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp GAGGCTCTCTGGAGCGGGCAGTGTTGGGCTTGGACCGAGCCATCCCCACAGGTCGTGGAAGAACTCGGCTaGCATGGGCAGGAGAGGGCT +
Preference number: 4 (lower is better)
Translates to: EALWSGQCWAWTEPSPQVVEELG*HGQERA
Trigger: AGCCCTCTCCTGCCCATGCCAGCCGAGTTCTTCCAC...GACCTGTGGGGATGGCTCGGTCCAAGCCCAACACTGCCCGCTCCAGAGAGCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp CTCAGCGTCACCCCAGCGTTCCCAAACCCCCTTGCACGGTGGTGCCCTCGGCCTGCAGACACTGCAGGGTaGAAGAACTCGGCTGGCATG +
Preference number: 4 (lower is better)
Translates to: LSVTPAFPNPLARWCPRPADTAG*KNSAGM
Trigger: CATGCCAGCCGAGTTCTTCCACCCTGCAGTGTCTGC...AGGCCGAGGGCACCACCGTGCAAGGGGGTTTGGGAACGCTGGGGTGACGCTGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR CCA 90 bp GAGGGCTGTGGCCCTGGCCAATCCAGTACGGGGGACCCTGCAGCCCGAGGCTTCTTTTCTGGGCCTTTCTaGCTGGCAGACACTGCAGGG +
Preference number: 4 (lower is better)
Translates to: EGCGPGQSSTGDPAARGFFSGPF*LADTAG
Trigger: CCCTGCAGTGTCTGCCAGCCAGAAAGGCCCAGAAAA...GAAGCCTCGGGCTGCAGGGTCCCCCGTACTGGATTGGCCAGGGCCACAGCCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR CCA 90 bp GCCATGGGCCAGCAGGTACCAGCGCCATCAGCAACTAGGAGGGAAGTTCATTCATGCAGCCCGGGCTGGTaGAGCCCCCGCTGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: AMGQQVPAPSATRREVHSCSPGW*SPRCCG
Trigger: GCCACAGCAGCGGGGGCTCCACCAGCCCGGGCTGCA...TGAATGAACTTCCCTCCTAGTTGCTGATGGCGCTGGTACCTGCTGGCCCATGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp CTGAATTGCACCTCTTCTCCAGGGCCTGGTGCCCTCAGAGGCCTGAGGGTCCTCCTGGAAGGGCCACCATaGGCCACGCAGGCCTGGCTA +
Preference number: 4 (lower is better)
Translates to: LNCTSSPGPGALRGLRVLLEGPP*ATQAWL
Trigger: TAGCCAGGCCTGCGTGGCCCATGGTGGCCCTTCCAG...GAGGACCCTCAGGCCTCTGAGGGCACCAGGCCCTGGAGAAGAGGTGCAATTCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp GCACAGATGCCAAGGTGCCTGCCCACCACCGCTCTACGGAGCCCAGCAGACAGCGCATCTGCAAACTCGTaGCCCCTGCAGCCTCTCCAG +
Preference number: 4 (lower is better)
Translates to: AQMPRCLPTTALRSPADSASANS*PLQPLQ
Trigger: CTGGAGAGGCTGCAGGGGCCACGAGTTTGCAGATGC...GCTGTCTGCTGGGCTCCGTAGAGCGGTGGTGGGCAGGCACCTTGGCATCTGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp GAGGCTCTCTGGAGCGGGCAGTGTTGGGCTTGGACCGAGCCATCCCCACAGGTCCTGCTCTGTGGACCCTaGAGCCTTCGCTCATGCCCA +
Preference number: 4 (lower is better)
Translates to: EALWSGQCWAWTEPSPQVLLCGP*SLRSCP
Trigger: TGGGCATGAGCGAAGGCTCCAGGGTCCACAGAGCAG...GACCTGTGGGGATGGCTCGGTCCAAGCCCAACACTGCCCGCTCCAGAGAGCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp GAGGCTCTCTGGAGCGGGCAGTGTTGGGCTTGGACCGAGCCATCCCCACAGGTCACACTCCCTGCTCTGTaGACCCTGGAGCCTTCGCTC +
Preference number: 4 (lower is better)
Translates to: EALWSGQCWAWTEPSPQVTLPAL*TLEPSL
Trigger: GAGCGAAGGCTCCAGGGTCCACAGAGCAGGGAGTGT...GACCTGTGGGGATGGCTCGGTCCAAGCCCAACACTGCCCGCTCCAGAGAGCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp TGGACCCTGGAGCCTTCGCTCATGCCCATCCCTTTGCCTAGAACACCTGCCTCGCGCAGCAAACGGGGCTaGGGTTGGCCCTGGAAGCGG +
Preference number: 4 (lower is better)
Translates to: WTLEPSLMPIPLPRTPASRSKRG*GWPWKR
Trigger: CCGCTTCCAGGGCCAACCCCAGCCCCGTTTGCTGCG...CGAGGCAGGTGTTCTAGGCAAAGGGATGGGCATGAGCGAAGGCTCCAGGGTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp GCAGGGAGTTTGTGTCCTGCCCGCCAGAGCACACAGCCTGGTGTGACGGGTCAGCTTCCAGACCCGCCTTaGGGTCCTCCCCACACTCTG +
Preference number: 4 (lower is better)
Translates to: AGSLCPARQSTQPGVTGQLPDPP*GPPHTL
Trigger: CAGAGTGTGGGGAGGACCCCAAGGCGGGTCTGGAAG...CTGACCCGTCACACCAGGCTGTGTGCTCTGGCGGGCAGGACACAAACTCCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401624.5
3UTR CAA 72 bp CAAACCCCCTTGCACGGTGGTGCCCTCGGCCTTTGGTaGGGTCCTTCCCCTCCCAGTCCCTTGGACTTCCAG +
Preference number: 4 (lower is better)
Translates to: QTPLHGGALGLW*GPSPPSPLDFQ
Trigger: CTGGAAGTCCAAGGGACTGGGAGGGGAAGGACCCAACCAAAGGCCGAGGGCACCACCGTGCAAGGGGGTTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR TCA 90 bp GCCATGGGCCAGCAGGTACCAGCGCCATCAGCAACTAGGAGGGAAGTTCATTCACGGGCTGCTCCGTGGTaGCTCCTGGCTCAGCGGCTG +
Preference number: 4 (lower is better)
Translates to: AMGQQVPAPSATRREVHSRAAPW*LLAQRL
Trigger: CAGCCGCTGAGCCAGGAGTCACCACGGAGCAGCCCG...TGAATGAACTTCCCTCCTAGTTGCTGATGGCGCTGGTACCTGCTGGCCCATGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR TCA 90 bp TCACCCAGTGAATCAACTGCACTCACTGTGGGAGCCGGCCCGGCCCCATTTCCCCTCCTTCCCCAGTTCTaGGGAGGCTCCGTCCTCGCT +
Preference number: 4 (lower is better)
Translates to: SPSESTALTVGAGPAPFPLLPQF*GGSVLA
Trigger: AGCGAGGACGGAGCCTCCTCAGAACTGGGGAAGGAG...GGGAAATGGGGCCGGGCCGGCTCCCACAGTGAGTGCAGTTGATTCACTGGGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR TCA 90 bp CCTAGTAATCAAGCCCCCACTCACACCCACCCAGAGCACCCAGGGTGTCCTCCCACGGCGGCTTGTGCTTaGGGCTGTTCCAGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: PSNQAPTHTHPEHPGCPPTAACA*GCSSWS
Trigger: GCTCCAGCTGGAACAGCCTCAAGCACAAGCCGCCGT...GGGAGGACACCCTGGGTGCTCTGGGTGGGTGTGAGTGGGGGCTTGATTACTAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR TCA 90 bp GAGGCTCTCTGGAGCGGGCAGTGTTGGGCTTGGACCGAGCCATCCCCACAGGTCGGTCGCCCATCTTGGTaGAGACGTCTTTGGCGATGC +
Preference number: 4 (lower is better)
Translates to: EALWSGQCWAWTEPSPQVGRPSW*RRLWRC
Trigger: GCATCGCCAAAGACGTCTTCACCAAGATGGGCGACC...GACCTGTGGGGATGGCTCGGTCCAAGCCCAACACTGCCCGCTCCAGAGAGCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR TCA 90 bp CTCAGCGTCACCCCAGCGTTCCCAAACCCCCTTGCACGGTGGTGCCCTCGGCCTTGGGCAATAATGGTCTaGCACAGGACCCGGAACCTG +
Preference number: 4 (lower is better)
Translates to: LSVTPAFPNPLARWCPRPWAIMV*HRTRNL
Trigger: CAGGTTCCGGGTCCTGTGTCAGACCATTATTGCCCA...AGGCCGAGGGCACCACCGTGCAAGGGGGTTTGGGAACGCTGGGGTGACGCTGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR TCA 90 bp CAGCACAGTGTCCAGGAACAGCCACAGCTCAGCGCCCATATGGGGGATAAAAGGCTGCCGGCCTCGATCTaGGGCCGCTCCAGGGCGATG +
Preference number: 4 (lower is better)
Translates to: QHSVQEQPQLSAHMGDKRLPASI*GRSRAM
Trigger: CATCGCCCTGGAGCGGCCTCAGATCGAGGCCGGCAG...CCTTTTATCCCCCATATGGGCGCTGAGCTGTGGCTGTTCCTGGACACTGTGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR TCA 90 bp CTGCCTCGAGGTGTCTGCTTGCAGAGTCACACGGTTCAGGGTAAGGGGAGGTTTCTGCCGGCCTCGATCTaGGGCCGCTCCAGGGCGATG +
Preference number: 4 (lower is better)
Translates to: LPRGVCLQSHTVQGKGRFLPASI*GRSRAM
Trigger: CATCGCCCTGGAGCGGCCTCAGATCGAGGCCGGCAG...AAACCTCCCCTTACCCTGAACCGTGTGACTCTGCAAGCAGACACCTCGAGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR TCA 90 bp CTCCAGTCTCAGCGTCACCCCAGCGTTCCCAAACCCCCTTGCACGGTGGTGCCCACAGTTGACCCTTGGTaGCCGCAGAGATGCCCAGGA +
Preference number: 4 (lower is better)
Translates to: LQSQRHPSVPKPPCTVVPTVDPW*PQRCPG
Trigger: TCCTGGGCATCTCTGCGGTCACCAAGGGTCAACTGT...GGGCACCACCGTGCAAGGGGGTTTGGGAACGCTGGGGTGACGCTGAGACTGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR TCA 90 bp GCCATGGGCCAGCAGGTACCAGCGCCATCAGCAACTAGGAGGGAAGTTCATTCATTTCCCGGGTGGGCTTaGCAACCCCTCCCGGCCCCC +
Preference number: 4 (lower is better)
Translates to: AMGQQVPAPSATRREVHSFPGWA*QPLPAP
Trigger: GGGGGCCGGGAGGGGTTGTCAAGCCCACCCGGGAAA...TGAATGAACTTCCCTCCTAGTTGCTGATGGCGCTGGTACCTGCTGGCCCATGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR TCA 90 bp CTCAGCGTCACCCCAGCGTTCCCAAACCCCCTTGCACGGTGGTGCCCTCGGCCTCTCCCTTCATCTCCCTaGCCCTTAGTCTTCCCATGG +
Preference number: 4 (lower is better)
Translates to: LSVTPAFPNPLARWCPRPLPSSP*PLVFPW
Trigger: CCATGGGAAGACTAAGGGTCAGGGAGATGAAGGGAG...AGGCCGAGGGCACCACCGTGCAAGGGGGTTTGGGAACGCTGGGGTGACGCTGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR GCA 90 bp TGTCCTGGCCAGTGGATCACAGCTTCCCTGGTTCTCATCTCTGTCACCCACAGGCTCCGGGGTCCGGGCTaGTCCGTGGTGACTCCTGGC +
Preference number: 4 (lower is better)
Translates to: CPGQWITASLVLISVTHRLRGPG*SVVTPG
Trigger: GCCAGGAGTCACCACGGAGCAGCCCGGACCCCGGAG...CCTGTGGGTGACAGAGATGAGAACCAGGGAAGCTGTGATCCACTGGCCAGGACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp ACCCCAGCGTTCCCAAACCCCCTTGCACGGTGGTGCCCTCGGCCTTTGGTTGGGGGTTGGCGCTGCCCGTaGGGCACACATTGTAGTAAC +
Preference number: 4 (lower is better)
Translates to: TPAFPNPLARWCPRPLVGGWRCP*GTHCSN
Trigger: GTTACTACAATGTGTGCCGCACGGGCAGCGCCAACC...CCCAACCAAAGGCCGAGGGCACCACCGTGCAAGGGGGTTTGGGAACGCTGGGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR GCA 90 bp TTCCCAAACCCCCTTGCACGGTGGTGCCCTCGGCCTTTGGTTGGGTCCTTCCCCAGCCGGTGCTCCCGTTaGTTGGTCTCCGAGAACTGG +
Preference number: 4 (lower is better)
Translates to: FPNPLARWCPRPLVGSFPSRCSR*LVSENW
Trigger: CCAGTTCTCGGAGACCAAGCAACGGGAGCACCGGCT...GGGGAAGGACCCAACCAAAGGCCGAGGGCACCACCGTGCAAGGGGGTTTGGGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR GCA 90 bp CTCTCCTCCCCTCCCCTCAAGCTAGGGATCACAGGCCTCTTCCAGACCCGCCTTCGTAGCTGGCCACCGTaGTGGAGGACAGGTAGCGCT +
Preference number: 4 (lower is better)
Translates to: LSSPPLKLGITGLFQTRLRSWPP*WRTGSA
Trigger: AGCGCTACCTGTCCTCCAGCACGGTGGCCAGCTACG...AAGGCGGGTCTGGAAGAGGCCTGTGATCCCTAGCTTGAGGGGAGGGGAGGAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR GCA 90 bp GAATTCGGTCAGAGCTGCTTTGCCTTGAACCTACTGGGGCGGGGGCATAGTTGCGTGGCGGGGATGGGCTaGACCAGGGTGTGGGGCGTC +
Preference number: 4 (lower is better)
Translates to: EFGQSCFALNLLGRGHSCVAGMG*TRVWGV
Trigger: GACGCCCCACACCCTGGTGCAGCCCATCCCCGCCAC...GCAACTATGCCCCCGCCCCAGTAGGTTCAAGGCAAAGCAGCTCTGACCGAATTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp CCAGTGAATCAACTGCACTCACTGTGGGAGCCGGCCCGGCCCCATTTCCCCACCGCTTGGGATCTCCGCTaGTGTCCAGGCCTTCCTGGA +
Preference number: 4 (lower is better)
Translates to: PVNQLHSLWEPARPHFPTAWDLR*CPGLPG
Trigger: TCCAGGAAGGCCTGGACAGCAGCGGAGATCCCAAGC...GGTGGGGAAATGGGGCCGGGCCGGCTCCCACAGTGAGTGCAGTTGATTCACTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR GCA 90 bp CGGGTCAGACAGTCACCCAGTGAATCAACTGCACTCACTGTGGGAGCCGGCCCGCCAGCAGGACCTAGGTaGCCACCCAGTGGGAGACTG +
Preference number: 4 (lower is better)
Translates to: RVRQSPSESTALTVGAGPPAGPR*PPSGRL
Trigger: CAGTCTCCCACTGGGTGGGCACCTAGGTCCTGCTGG...CGGGCCGGCTCCCACAGTGAGTGCAGTTGATTCACTGGGTGACTGTCTGACCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR GCA 90 bp CTCTCCTCCCCTCCCCTCAAGCTAGGGATCACAGGCCTCTTCCAGACCCGCCTTGCCGACGGCGGCTTGTaGTTGAGGCTGTTCCAGCTG +
Preference number: 4 (lower is better)
Translates to: LSSPPLKLGITGLFQTRLADGGL*LRLFQL
Trigger: CAGCTGGAACAGCCTCAAGCACAAGCCGCCGTCGGC...AAGGCGGGTCTGGAAGAGGCCTGTGATCCCTAGCTTGAGGGGAGGGGAGGAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR GCA 90 bp GAGTTTGTGTCCTGCCCGCCAGAGCACACAGCCTGGTGTGACGGGTCAGACAGTGAGAGCAGGGACTCATaGTCCGCCGACGGCGGCTTG +
Preference number: 4 (lower is better)
Translates to: EFVSCPPEHTAWCDGSDSESRDS*SADGGL
Trigger: CAAGCCGCCGTCGGCGGAGCATGAGTCCCTGCTCTC...ACTGTCTGACCCGTCACACCAGGCTGTGTGCTCTGGCGGGCAGGACACAAACTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR GCA 90 bp CAAACCCCCTTGCACGGTGGTGCCCTCGGCCTTTGGTTGGGTCCTTCCCCTCCCCGATGCTGGGCATCCTaGCATTGCAGTCCTCATGCC +
Preference number: 4 (lower is better)
Translates to: QTPLHGGALGLWLGPSPPRCWAS*HCSPHA
Trigger: GGCATGAGGACTGCAATGGCAGGATGCCCAGCATCG...GGGAGGGGAAGGACCCAACCAAAGGCCGAGGGCACCACCGTGCAAGGGGGTTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR GCA 90 bp TCACCCAGTGAATCAACTGCACTCACTGTGGGAGCCGGCCCGGCCCCATTTCCCAGATGCGTTCGGTGCTaGCGGCCTCGATCTGAGGCC +
Preference number: 4 (lower is better)
Translates to: SPSESTALTVGAGPAPFPRCVRC*RPRSEA
Trigger: GGCCTCAGATCGAGGCCGGCAGCACCGAACGCATCT...GGGAAATGGGGCCGGGCCGGCTCCCACAGTGAGTGCAGTTGATTCACTGGGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR GCA 90 bp CTCCAGTCTCAGCGTCACCCCAGCGTTCCCAAACCCCCTTGCACGGTGGTGCCCGAAAGATGCGTTCGGTaGTGCCGGCCTCGATCTGAG +
Preference number: 4 (lower is better)
Translates to: LQSQRHPSVPKPPCTVVPERCVR*CRPRSE
Trigger: CTCAGATCGAGGCCGGCAGCACCGAACGCATCTTTC...GGGCACCACCGTGCAAGGGGGTTTGGGAACGCTGGGGTGACGCTGAGACTGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR GCA 90 bp GAGGCTCTCTGGAGCGGGCAGTGTTGGGCTTGGACCGAGCCATCCCCACAGGTCGAAAGATGCGTTCGGTaGTGCCGGCCTCGATCTGAG +
Preference number: 4 (lower is better)
Translates to: EALWSGQCWAWTEPSPQVERCVR*CRPRSE
Trigger: CTCAGATCGAGGCCGGCAGCACCGAACGCATCTTTC...GACCTGTGGGGATGGCTCGGTCCAAGCCCAACACTGCCCGCTCCAGAGAGCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp GGTCAGAGCTGCTTTGCCTTGAACCTACTGGGGCGGGGGCATAGTTGCTCAGGAGCAGGGGGCGTAGGGTaGGCAGGAGCCGCAAGACTC +
Preference number: 4 (lower is better)
Translates to: GQSCFALNLLGRGHSCSGAGGVG*AGAARL
Trigger: GAGTCTTGCGGCTCCTGCGCACCCTACGCCCCCTGC...TCCTGAGCAACTATGCCCCCGCCCCAGTAGGTTCAAGGCAAAGCAGCTCTGACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp GCACAGATGCCAAGGTGCCTGCCCACCACCGCTCTACGGAGCCCAGCAGACAGCGCGCCTCAGACCAAATaGCACCAGCTTCAGCACAGC +
Preference number: 4 (lower is better)
Translates to: AQMPRCLPTTALRSPADSAPQTK*HQLQHS
Trigger: GCTGTGCTGAAGCTGGTGGCATTTGGTCTGAGGCGC...GCTGTCTGCTGGGCTCCGTAGAGCGGTGGTGGGCAGGCACCTTGGCATCTGTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp AGGGAGTTTGTGTCCTGCCCGCCAGAGCACACAGCCTGGTGTGACGGGTCAGACTGGCATGCCGGCTCATaGCCTCGCACGGGTTCTCGT +
Preference number: 4 (lower is better)
Translates to: REFVSCPPEHTAWCDGSDWHAGS*PRTGSR
Trigger: ACGAGAACCCGTGCGAGGGCATGAGCCGGCATGCCA...GTCTGACCCGTCACACCAGGCTGTGTGCTCTGGCGGGCAGGACACAAACTCCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR GCA 90 bp CGTTCCCAAACCCCCTTGCACGGTGGTGCCCTCGGCCTTTGGTTGGGTCCTTCCTTCTCGAAGGTGGCATaGCGGCTCATGCCCTCGCAC +
Preference number: 4 (lower is better)
Translates to: RSQTPLHGGALGLWLGPSFSKVA*RLMPSH
Trigger: GTGCGAGGGCATGAGCCGGCATGCCACCTTCGAGAA...GGAAGGACCCAACCAAAGGCCGAGGGCACCACCGTGCAAGGGGGTTTGGGAACG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR GCA 90 bp GGCCAGAATCCCAGAGCATCAGACAAAAGCCCCGTCCAGGCCCTGGCCCACCTCTTCTCGAAGGTGGCATaGCGGCTCATGCCCTCGCAC +
Preference number: 4 (lower is better)
Translates to: GQNPRASDKSPVQALAHLFSKVA*RLMPSH
Trigger: GTGCGAGGGCATGAGCCGGCATGCCACCTTCGAGAA...GAGGTGGGCCAGGGCCTGGACGGGGCTTTTGTCTGATGCTCTGGGATTCTGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp TTCCCAAACCCCCTTGCACGGTGGTGCCCTCGGCCTTTGGTTGGGTCCTTCCCCAGCGGCGACACAAACTaGAGGCTGCTCAGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: FPNPLARWCPRPLVGSFPSGDTN*RLLRQL
Trigger: CAGCTGCCTGAGCAGCCTGCAGTTTGTGTCGCCGCT...GGGGAAGGACCCAACCAAAGGCCGAGGGCACCACCGTGCAAGGGGGTTTGGGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR GCA 90 bp GGCCAGAATCCCAGAGCATCAGACAAAAGCCCCGTCCAGGCCCTGGCCCACCTCCGTGGTGACACTTCTTaGAGCCGGCAGGCGAGGAGT +
Preference number: 4 (lower is better)
Translates to: GQNPRASDKSPVQALAHLRGDTS*SRQARS
Trigger: ACTCCTCGCCTGCCGGCTGCAAGAAGTGTCACCACG...GAGGTGGGCCAGGGCCTGGACGGGGCTTTTGTCTGATGCTCTGGGATTCTGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp GTGTCCTGCCCGCCAGAGCACACAGCCTGGTGTGACGGGTCAGACAGTCACCCAGGTCCAGCTCACCCTTaGTGTCTTTGCGGCCAGGTG +
Preference number: 4 (lower is better)
Translates to: VSCPPEHTAWCDGSDSHPGPAHP*CLCGQV
Trigger: CACCTGGCCGCAAAGACAGCAAGGGTGAGCTGGACC...TGGGTGACTGTCTGACCCGTCACACCAGGCTGTGTGCTCTGGCGGGCAGGACAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR GCA 90 bp GCCATGGGCCAGCAGGTACCAGCGCCATCAGCAACTAGGAGGGAAGTTCATTCAGCGGCCGGGGGCCCCTaGGACCCTCATCTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: AMGQQVPAPSATRREVHSAAGGP*DPHLFL
Trigger: GAGGAAGAGATGAGGGTCGCAGGGGCCCCCGGCCGC...TGAATGAACTTCCCTCCTAGTTGCTGATGGCGCTGGTACCTGCTGGCCCATGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp GCCATGGGCCAGCAGGTACCAGCGCCATCAGCAACTAGGAGGGAAGTTCATTCAGTGCCCTGCGGGCCCTaGGCGATCCCAGGTGTGGAC +
Preference number: 4 (lower is better)
Translates to: AMGQQVPAPSATRREVHSVPCGP*AIPGVD
Trigger: GTCCACACCTGGGATCGCGCAGGGCCCGCAGGGCAC...TGAATGAACTTCCCTCCTAGTTGCTGATGGCGCTGGTACCTGCTGGCCCATGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp GCACAGATGCCAAGGTGCCTGCCCACCACCGCTCTACGGAGCCCAGCAGACAGCCAAACTCGTGGCCCCTaGAGCCTCTCCAGATCACTG +
Preference number: 4 (lower is better)
Translates to: AQMPRCLPTTALRSPADSQTRGP*SLSRSL
Trigger: CAGTGATCTGGAGAGGCTGCAGGGGCCACGAGTTTG...GCTGTCTGCTGGGCTCCGTAGAGCGGTGGTGGGCAGGCACCTTGGCATCTGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp GCACAGATGCCAAGGTGCCTGCCCACCACCGCTCTACGGAGCCCAGCAGACAGCAGGAGCAGTCAAGCCTaGCCAGCTCCACTTCTTCCC +
Preference number: 4 (lower is better)
Translates to: AQMPRCLPTTALRSPADSRSSQA*PAPLLP
Trigger: GGGAAGAAGTGGAGCTGGGCAGGCTTGACTGCTCCT...GCTGTCTGCTGGGCTCCGTAGAGCGGTGGTGGGCAGGCACCTTGGCATCTGTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp GCACAGATGCCAAGGTGCCTGCCCACCACCGCTCTACGGAGCCCAGCAGACAGCCCTCCTTTAAGGGGCTaGCTGGTGCCGGAGAAGGTA +
Preference number: 4 (lower is better)
Translates to: AQMPRCLPTTALRSPADSPPLRG*LVPEKV
Trigger: TACCTTCTCCGGCACCAGGCAGCCCCTTAAAGGAGG...GCTGTCTGCTGGGCTCCGTAGAGCGGTGGTGGGCAGGCACCTTGGCATCTGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp CGGGTCAGACAGTCACCCAGTGAATCAACTGCACTCACTGTGGGAGCCGGCCCGGGGGAGGCAGGCCCATaGAAAGTCTGGCAATGCCGG +
Preference number: 4 (lower is better)
Translates to: RVRQSPSESTALTVGAGPGEAGP*KVWQCR
Trigger: CCGGCATTGCCAGACTTTGCATGGGCCTGCCTCCCC...CGGGCCGGCTCCCACAGTGAGTGCAGTTGATTCACTGGGTGACTGTCTGACCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR GCA 90 bp TCACCCAGTGAATCAACTGCACTCACTGTGGGAGCCGGCCCGGCCCCATTTCCCCAGTACGGGGGACCCTaGAGCCCGAGGCTTCTCATC +
Preference number: 4 (lower is better)
Translates to: SPSESTALTVGAGPAPFPQYGGP*SPRLLI
Trigger: GATGAGAAGCCTCGGGCTGCAGGGTCCCCCGTACTG...GGGAAATGGGGCCGGGCCGGCTCCCACAGTGAGTGCAGTTGATTCACTGGGTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR GCA 90 bp CCAGTGAATCAACTGCACTCACTGTGGGAGCCGGCCCGGCCCCATTTCCCCACCCTTCAGACCTCTGTGTaGCCGTGGGTAGGAGGGCTG +
Preference number: 4 (lower is better)
Translates to: PVNQLHSLWEPARPHFPTLQTSV*PWVGGL
Trigger: CAGCCCTCCTACCCACGGGCACACAGAGGTCTGAAG...GGTGGGGAAATGGGGCCGGGCCGGCTCCCACAGTGAGTGCAGTTGATTCACTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR GCA 90 bp GGATCACAGGCCTCTTCCAGACCCGCCTTGGGGTCCTCCCCACACTCTGCTGTCCAGCGGAGCCCTCAGTaGTTCAGACCTCTGTGTGCC +
Preference number: 4 (lower is better)
Translates to: GSQASSRPALGSSPHSAVQRSPQ*FRPLCA
Trigger: GGCACACAGAGGTCTGAAGCACTGAGGGCTCCGCTG...GACAGCAGAGTGTGGGGAGGACCCCAAGGCGGGTCTGGAAGAGGCCTGTGATCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR CCA 90 bp CGTTCCCAAACCCCCTTGCACGGTGGTGCCCTCGGCCTTTGGTTGGGTCCTTCCAGTTCCGGGGGCTGGTaGTCTGTCGCAGGCAGAAGA +
Preference number: 4 (lower is better)
Translates to: RSQTPLHGGALGLWLGPSSSGGW*SVAGRR
Trigger: TCTTCTGCCTGCGACAGACCACCAGCCCCCGGAACT...GGAAGGACCCAACCAAAGGCCGAGGGCACCACCGTGCAAGGGGGTTTGGGAACG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR CCA 90 bp GAGTTTGTGTCCTGCCCGCCAGAGCACACAGCCTGGTGTGACGGGTCAGACAGTCTGGCATTGAGGTCCTaGCGCCCCGCCCCAAAGTCG +
Preference number: 4 (lower is better)
Translates to: EFVSCPPEHTAWCDGSDSLALRS*RPAPKS
Trigger: CGACTTTGGGGCGGGGCGCCAGGACCTCAATGCCAG...ACTGTCTGACCCGTCACACCAGGCTGTGTGCTCTGGCGGGCAGGACACAAACTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR CCA 90 bp GGGGACAGCACAGTGTCCAGGAACAGCCACAGCTCAGCGCCCATATGGGGGATACAGGCTCGGCGTAGCTaGCCACCGTGCTGGAGGACA +
Preference number: 4 (lower is better)
Translates to: GDSTVSRNSHSSAPIWGIQARRS*PPCWRT
Trigger: TGTCCTCCAGCACGGTGGCCAGCTACGCCGAGCCTG...TATCCCCCATATGGGCGCTGAGCTGTGGCTGTTCCTGGACACTGTGCTGTCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp CTTGTCCTGGCCAGTGGATCACAGCTTCCCTGGTTCTCATCTCTGTCACCCACAGAGCCCGAGCCCTCCTaGCCCGAGTCGGTGCTGCCC +
Preference number: 4 (lower is better)
Translates to: LVLASGSQLPWFSSLSPTEPEPS*PESVLP
Trigger: GGGCAGCACCGACTCGGGCCAGGAGGGCTCGGGCTC...TGTGGGTGACAGAGATGAGAACCAGGGAAGCTGTGATCCACTGGCCAGGACAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp CACCCCCACAGCGGAGCCCTCAGTGCTTCAGACCTCTGTGTGCCCGTGGGTAGGGGATTGGGCAGAGCTTaGGATCTCCGCTGCTGTCCA +
Preference number: 4 (lower is better)
Translates to: HPHSGALSASDLCVPVGRGLGRA*DLRCCP
Trigger: TGGACAGCAGCGGAGATCCCAAGCTCTGCCCAATCC...CCTACCCACGGGCACACAGAGGTCTGAAGCACTGAGGGCTCCGCTGTGGGGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR CCA 90 bp GAGGCTCTCTGGAGCGGGCAGTGTTGGGCTTGGACCGAGCCATCCCCACAGGTCGGATTGGGCAGAGCTTaGGATCTCCGCTGCTGTCCA +
Preference number: 4 (lower is better)
Translates to: EALWSGQCWAWTEPSPQVGLGRA*DLRCCP
Trigger: TGGACAGCAGCGGAGATCCCAAGCTCTGCCCAATCC...GACCTGTGGGGATGGCTCGGTCCAAGCCCAACACTGCCCGCTCCAGAGAGCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp GCAGGGAGTTTGTGTCCTGCCCGCCAGAGCACACAGCCTGGTGTGACGGGTCAGGCCCATTGGGGGTCATaGGGATTGGGCAGAGCTTGG +
Preference number: 4 (lower is better)
Translates to: AGSLCPARQSTQPGVTGQAHWGS*GLGRAW
Trigger: CCAAGCTCTGCCCAATCCCCATGACCCCCAATGGGC...CTGACCCGTCACACCAGGCTGTGTGCTCTGGCGGGCAGGACACAAACTCCCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR CCA 90 bp CTGAATTGCACCTCTTCTCCAGGGCCTGGTGCCCTCAGAGGCCTGAGGGTCCTCAGGAGCTCCGGGAGCTaGACAGGGAGCGCTGGTCAT +
Preference number: 4 (lower is better)
Translates to: LNCTSSPGPGALRGLRVLRSSGS*TGSAGH
Trigger: ATGACCAGCGCTCCCTGTCCAGCTCCCGGAGCTCCT...GAGGACCCTCAGGCCTCTGAGGGCACCAGGCCCTGGAGAAGAGGTGCAATTCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp GGGGACAGCACAGTGTCCAGGAACAGCCACAGCTCAGCGCCCATATGGGGGATAGGACCCCCAAGATCTTaGCTCCCCCGGCTGAGGCCA +
Preference number: 4 (lower is better)
Translates to: GDSTVSRNSHSSAPIWGIGPPRS*LPRLRP
Trigger: TGGCCTCAGCCGGGGGAGCCAAGATCTTGGGGGTCC...TATCCCCCATATGGGCGCTGAGCTGTGGCTGTTCCTGGACACTGTGCTGTCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp CCCTTGCACGGTGGTGCCCTCGGCCTTTGGTTGGGTCCTTCCCCTCCCAGTCCCTTGGTCACAGGCTGCTaGTCCACAGCAACAGCATCC +
Preference number: 4 (lower is better)
Translates to: PLHGGALGLWLGPSPPSPLVTGC*STATAS
Trigger: GGATGCTGTTGCTGTGGACCAGCAGCCTGTGACCAA...GGGACTGGGAGGGGAAGGACCCAACCAAAGGCCGAGGGCACCACCGTGCAAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR CCA 90 bp CCCTTGCACGGTGGTGCCCTCGGCCTTTGGTTGGGTCCTTCCCCTCCCAGTCCCCTGTCTCCAGGGACGTaGGCTGATTGTAGTGCTCCA +
Preference number: 4 (lower is better)
Translates to: PLHGGALGLWLGPSPPSPLSPGT*ADCSAP
Trigger: TGGAGCACTACAATCAGCCCACGTCCCTGGAGACAG...GGGACTGGGAGGGGAAGGACCCAACCAAAGGCCGAGGGCACCACCGTGCAAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR CCA 90 bp GGCCGTCTCTGCACAGATGCCAAGGTGCCTGCCCACCACCGCTCTACGGAGCCCCTGTCTCCAGGGACGTaGGCTGATTGTAGTGCTCCA +
Preference number: 4 (lower is better)
Translates to: GRLCTDAKVPAHHRSTEPLSPGT*ADCSAP
Trigger: TGGAGCACTACAATCAGCCCACGTCCCTGGAGACAG...GGGCTCCGTAGAGCGGTGGTGGGCAGGCACCTTGGCATCTGTGCAGAGACGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp GAGGCTCTCTGGAGCGGGCAGTGTTGGGCTTGGACCGAGCCATCCCCACAGGTCCGAAGTTCTCGAAGGTaGCATGCCGGCTCATGCCCT +
Preference number: 4 (lower is better)
Translates to: EALWSGQCWAWTEPSPQVRSSRR*HAGSCP
Trigger: AGGGCATGAGCCGGCATGCCACCTTCGAGAACTTCG...GACCTGTGGGGATGGCTCGGTCCAAGCCCAACACTGCCCGCTCCAGAGAGCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp CCACCCCTGCCTAGAATTCGGTCAGAGCTGCTTTGCCTTGAACCTACTGGGGCGCAGCTGCGCTCGTCGTaGGTGCAGTCCCGCAGCGTG +
Preference number: 4 (lower is better)
Translates to: PPLPRIRSELLCLEPTGAQLRSS*VQSRSV
Trigger: CACGCTGCGGGACTGCACCCACGACGAGCGCAGCTG...CGCCCCAGTAGGTTCAAGGCAAAGCAGCTCTGACCGAATTCTAGGCAGGGGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp CGGGTCAGACAGTCACCCAGTGAATCAACTGCACTCACTGTGGGAGCCGGCCCGGGTCTCCCACACGCATaGGCTCAGGTGGGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: RVRQSPSESTALTVGAGPGLPHA*AQVGPA
Trigger: AGCTGGACCCACCTGAGCCCATGCGTGTGGGAGACC...CGGGCCGGCTCCCACAGTGAGTGCAGTTGATTCACTGGGTGACTGTCTGACCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR CCA 90 bp GAGGCTCTCTGGAGCGGGCAGTGTTGGGCTTGGACCGAGCCATCCCCACAGGTCGCAGACACTGCAGGGTaGAAGAACTCGGCTGGCATG +
Preference number: 4 (lower is better)
Translates to: EALWSGQCWAWTEPSPQVADTAG*KNSAGM
Trigger: CATGCCAGCCGAGTTCTTCCACCCTGCAGTGTCTGC...GACCTGTGGGGATGGCTCGGTCCAAGCCCAACACTGCCCGCTCCAGAGAGCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp GGATCACAGGCCTCTTCCAGACCCGCCTTGGGGTCCTCCCCACACTCTGCTGTCCTGGGCCTTTCTGGCTaGCAGACACTGCAGGGTGGA +
Preference number: 4 (lower is better)
Translates to: GSQASSRPALGSSPHSAVLGLSG*QTLQGG
Trigger: TCCACCCTGCAGTGTCTGCCAGCCAGAAAGGCCCAG...GACAGCAGAGTGTGGGGAGGACCCCAAGGCGGGTCTGGAAGAGGCCTGTGATCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR CCA 90 bp CCACCCCTGCCTAGAATTCGGTCAGAGCTGCTTTGCCTTGAACCTACTGGGGCGACGTGTCGCTCCCGGTaGCCTGCCGGAGGAGGGTAC +
Preference number: 4 (lower is better)
Translates to: PPLPRIRSELLCLEPTGATCRSR*PAGGGY
Trigger: GTACCCTCCTCCGGCAGGCCACCGGGAGCGACACGT...CGCCCCAGTAGGTTCAAGGCAAAGCAGCTCTGACCGAATTCTAGGCAGGGGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp CTGCCTCGAGGTGTCTGCTTGCAGAGTCACACGGTTCAGGGTAAGGGGAGGTTTCGGAGCTGCTGGGGCTaGCGTCCAGCGACGTGTCGC +
Preference number: 4 (lower is better)
Translates to: LPRGVCLQSHTVQGKGRFRSCWG*RPATCR
Trigger: GCGACACGTCGCTGGACGCCAGCCCCAGCAGCTCCG...AAACCTCCCCTTACCCTGAACCGTGTGACTCTGCAAGCAGACACCTCGAGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp CAGCACAGTGTCCAGGAACAGCCACAGCTCAGCGCCCATATGGGGGATAAAAGGGGCTGTCCTCGAGCGTaGTCTGCAGGCTGCCCGCGG +
Preference number: 4 (lower is better)
Translates to: QHSVQEQPQLSAHMGDKRGCPRA*SAGCPR
Trigger: CCGCGGGCAGCCTGCAGACCACGCTCGAGGACAGCC...CCTTTTATCCCCCATATGGGCGCTGAGCTGTGGCTGTTCCTGGACACTGTGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp CTGCCTCGAGGTGTCTGCTTGCAGAGTCACACGGTTCAGGGTAAGGGGAGGTTTGGCTGTCCTCGAGCGTaGTCTGCAGGCTGCCCGCGG +
Preference number: 4 (lower is better)
Translates to: LPRGVCLQSHTVQGKGRFGCPRA*SAGCPR
Trigger: CCGCGGGCAGCCTGCAGACCACGCTCGAGGACAGCC...AAACCTCCCCTTACCCTGAACCGTGTGACTCTGCAAGCAGACACCTCGAGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp GAGGCTCTCTGGAGCGGGCAGTGTTGGGCTTGGACCGAGCCATCCCCACAGGTCAGACACCCCGACACGTaGGAGCCACGTGGGATCTTA +
Preference number: 4 (lower is better)
Translates to: EALWSGQCWAWTEPSPQVRHPDT*EPRGIL
Trigger: TAAGATCCCACGTGGCTCCCACGTGTCGGGGTGTCT...GACCTGTGGGGATGGCTCGGTCCAAGCCCAACACTGCCCGCTCCAGAGAGCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp GCACAGATGCCAAGGTGCCTGCCCACCACCGCTCTACGGAGCCCAGCAGACAGCTGGGGTGGGAAGATGTaGCCTCCAGGTGACGCGAAA +
Preference number: 4 (lower is better)
Translates to: AQMPRCLPTTALRSPADSWGGKM*PPGDAK
Trigger: TTTCGCGTCACCTGGAGGCCACATCTTCCCACCCCA...GCTGTCTGCTGGGCTCCGTAGAGCGGTGGTGGGCAGGCACCTTGGCATCTGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp GGCCAGAATCCCAGAGCATCAGACAAAAGCCCCGTCCAGGCCCTGGCCCACCTCCACAGCTCTAGGGTGTaGAGTAGGGCCCTCCACACC +
Preference number: 4 (lower is better)
Translates to: GQNPRASDKSPVQALAHLHSSRV*SRALHT
Trigger: GGTGTGGAGGGCCCTACTCCACACCCTAGAGCTGTG...GAGGTGGGCCAGGGCCTGGACGGGGCTTTTGTCTGATGCTCTGGGATTCTGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp GGCCGTCTCTGCACAGATGCCAAGGTGCCTGCCCACCACCGCTCTACGGAGCCCTCTGAGCTGAGGATTTaGGGGAAGACAGCAGACGGG +
Preference number: 4 (lower is better)
Translates to: GRLCTDAKVPAHHRSTEPSELRI*GKTADG
Trigger: CCCGTCTGCTGTCTTCCCCCAAATCCTCAGCTCAGA...GGGCTCCGTAGAGCGGTGGTGGGCAGGCACCTTGGCATCTGTGCAGAGACGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp CACCCCCACAGCGGAGCCCTCAGTGCTTCAGACCTCTGTGTGCCCGTGGGTAGGCCAGAGCACACAGCCTaGTGTGACGGGTCAGACAGT +
Preference number: 4 (lower is better)
Translates to: HPHSGALSASDLCVPVGRPEHTA*CDGSDS
Trigger: ACTGTCTGACCCGTCACACCAGGCTGTGTGCTCTGG...CCTACCCACGGGCACACAGAGGTCTGAAGCACTGAGGGCTCCGCTGTGGGGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR TCA 90 bp ACCCCAGCGTTCCCAAACCCCCTTGCACGGTGGTGCCCTCGGCCTTTGGTTGGGTCTGGGTGTGGGACATaGGGATCAGCTCCATCCAGA +
Preference number: 4 (lower is better)
Translates to: TPAFPNPLARWCPRPLVGSGCGT*GSAPSR
Trigger: TCTGGATGGAGCTGATCCTCATGTCCCACACCCAGA...CCCAACCAAAGGCCGAGGGCACCACCGTGCAAGGGGGTTTGGGAACGCTGGGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR TCA 90 bp TGGACCCTGGAGCCTTCGCTCATGCCCATCCCTTTGCCTAGAACACCTGCCTCGCTCCTTCCCCAGTTCTaGGGAGGCTCCGTCCTCGCT +
Preference number: 4 (lower is better)
Translates to: WTLEPSLMPIPLPRTPASLLPQF*GGSVLA
Trigger: AGCGAGGACGGAGCCTCCTCAGAACTGGGGAAGGAG...CGAGGCAGGTGTTCTAGGCAAAGGGATGGGCATGAGCGAAGGCTCCAGGGTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR TCA 90 bp GCACAGATGCCAAGGTGCCTGCCCACCACCGCTCTACGGAGCCCAGCAGACAGCTCCTCCCTAGAGACATaGCACTGCTCTTTCGGGAGC +
Preference number: 4 (lower is better)
Translates to: AQMPRCLPTTALRSPADSSSLET*HCSFGS
Trigger: GCTCCCGAAAGAGCAGTGTCATGTCTCTAGGGAGGA...GCTGTCTGCTGGGCTCCGTAGAGCGGTGGTGGGCAGGCACCTTGGCATCTGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR TCA 90 bp GTGTCCTGCCCGCCAGAGCACACAGCCTGGTGTGACGGGTCAGACAGTCACCCAGGTCGCCCATCTTGGTaGAGACGTCTTTGGCGATGC +
Preference number: 4 (lower is better)
Translates to: VSCPPEHTAWCDGSDSHPGRPSW*RRLWRC
Trigger: GCATCGCCAAAGACGTCTTCACCAAGATGGGCGACC...TGGGTGACTGTCTGACCCGTCACACCAGGCTGTGTGCTCTGGCGGGCAGGACAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR TCA 90 bp GCCCCTCCAAGCAAGCCACTGCCGGCTCAGTCTCCCGCACCCTTCCTCTGCAGGTATAGTTGCAGTACTTaGGGGCTGTCTCCAGGGACG +
Preference number: 4 (lower is better)
Translates to: APPSKPLPAQSPAPFLCRYSCST*GLSPGT
Trigger: CGTCCCTGGAGACAGCCCTCAAGTACTGCAACTATA...CCTGCAGAGGAAGGGTGCGGGAGACTGAGCCGGCAGTGGCTTGCTTGGAGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR TCA 90 bp TCACCCAGTGAATCAACTGCACTCACTGTGGGAGCCGGCCCGGCCCCATTTCCCGCACGAACTGCGCGGTaGGCACGAAGCTCACGAAGT +
Preference number: 4 (lower is better)
Translates to: SPSESTALTVGAGPAPFPARTAR*ARSSRS
Trigger: ACTTCGTGAGCTTCGTGCTCACCGCGCAGTTCGTGC...GGGAAATGGGGCCGGGCCGGCTCCCACAGTGAGTGCAGTTGATTCACTGGGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR TCA 90 bp CTGAATTGCACCTCTTCTCCAGGGCCTGGTGCCCTCAGAGGCCTGAGGGTCCTCGCACGAACTGCGCGGTaGGCACGAAGCTCACGAAGT +
Preference number: 4 (lower is better)
Translates to: LNCTSSPGPGALRGLRVLARTAR*ARSSRS
Trigger: ACTTCGTGAGCTTCGTGCTCACCGCGCAGTTCGTGC...GAGGACCCTCAGGCCTCTGAGGGCACCAGGCCCTGGAGAAGAGGTGCAATTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR TCA 90 bp AGGGAGTTTGTGTCCTGCCCGCCAGAGCACACAGCCTGGTGTGACGGGTCAGACGGAGGAGGGTACAGTTaGCCCTTGGTGACCGCAGAG +
Preference number: 4 (lower is better)
Translates to: REFVSCPPEHTAWCDGSDGGGYS*PLVTAE
Trigger: CTCTGCGGTCACCAAGGGTCAACTGTACCCTCCTCC...GTCTGACCCGTCACACCAGGCTGTGTGCTCTGGCGGGCAGGACACAAACTCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR TCA 90 bp GGCCAGAATCCCAGAGCATCAGACAAAAGCCCCGTCCAGGCCCTGGCCCACCTCACGAGACAGTCAGGATaGCAGGACAGACACCCCGAC +
Preference number: 4 (lower is better)
Translates to: GQNPRASDKSPVQALAHLTRQSG*QDRHPD
Trigger: GTCGGGGTGTCTGTCCTGTCATCCTGACTGTCTCGT...GAGGTGGGCCAGGGCCTGGACGGGGCTTTTGTCTGATGCTCTGGGATTCTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR TCA 90 bp GCCCCTCCAAGCAAGCCACTGCCGGCTCAGTCTCCCGCACCCTTCCTCTGCAGGTGCTATAGTGAAAGCTaGGCTGCAGTTAGGGGCAGC +
Preference number: 4 (lower is better)
Translates to: APPSKPLPAQSPAPFLCRCYSES*AAVRGS
Trigger: GCTGCCCCTAACTGCAGCTCAGCTTTCACTATAGCA...CCTGCAGAGGAAGGGTGCGGGAGACTGAGCCGGCAGTGGCTTGCTTGGAGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR TCA 90 bp GAGGCTCTCTGGAGCGGGCAGTGTTGGGCTTGGACCGAGCCATCCCCACAGGTCAGTCGCAAGATGACCTaGGGCTGCTTGACTGGTGTC +
Preference number: 4 (lower is better)
Translates to: EALWSGQCWAWTEPSPQVSRKMT*GCLTGV
Trigger: GACACCAGTCAAGCAGCCTCAGGTCATCTTGCGACT...GACCTGTGGGGATGGCTCGGTCCAAGCCCAACACTGCCCGCTCCAGAGAGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR TCA 90 bp CGGGTCAGACAGTCACCCAGTGAATCAACTGCACTCACTGTGGGAGCCGGCCCGCTCAGCACTAAACAGTaGGCCCGGCAGGCAGGGAGT +
Preference number: 4 (lower is better)
Translates to: RVRQSPSESTALTVGAGPLSTKQ*ARQAGS
Trigger: ACTCCCTGCCTGCCGGGCTCACTGTTTAGTGCTGAG...CGGGCCGGCTCCCACAGTGAGTGCAGTTGATTCACTGGGTGACTGTCTGACCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR GCA 90 bp GCCCCTCCAAGCAAGCCACTGCCGGCTCAGTCTCCCGCACCCTTCCTCTGCAGGCGAGGTAGCACTTCTTaGCAAAAATCCCCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: APPSKPLPAQSPAPFLCRRGSTS*QKSPGP
Trigger: TGGCCCTGGGGATTTTTGGCAAGAAGTGCTACCTCG...CCTGCAGAGGAAGGGTGCGGGAGACTGAGCCGGCAGTGGCTTGCTTGGAGGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp TGGACCCTGGAGCCTTCGCTCATGCCCATCCCTTTGCCTAGAACACCTGCCTCGCCAGCAGGACCTAGGTaGCCACCCAGTGGGAGACTG +
Preference number: 4 (lower is better)
Translates to: WTLEPSLMPIPLPRTPASPAGPR*PPSGRL
Trigger: CAGTCTCCCACTGGGTGGGCACCTAGGTCCTGCTGG...CGAGGCAGGTGTTCTAGGCAAAGGGATGGGCATGAGCGAAGGCTCCAGGGTCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp TGGACCCTGGAGCCTTCGCTCATGCCCATCCCTTTGCCTAGAACACCTGCCTCGGCCGACGGCGGCTTGTaGTTGAGGCTGTTCCAGCTG +
Preference number: 4 (lower is better)
Translates to: WTLEPSLMPIPLPRTPASADGGL*LRLFQL
Trigger: CAGCTGGAACAGCCTCAAGCACAAGCCGCCGTCGGC...CGAGGCAGGTGTTCTAGGCAAAGGGATGGGCATGAGCGAAGGCTCCAGGGTCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp AGTACAGCATCTGCAAACTCGTGGCCCCTGCAGCCTCTCCAGATCACTGCCACCGAGAGCAGGGACTCATaGTCCGCCGACGGCGGCTTG +
Preference number: 4 (lower is better)
Translates to: STASANSWPLQPLQITATESRDS*SADGGL
Trigger: CAAGCCGCCGTCGGCGGAGCATGAGTCCCTGCTCTC...GGTGGCAGTGATCTGGAGAGGCTGCAGGGGCCACGAGTTTGCAGATGCTGTACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp AGTCACCCAGTGAATCAACTGCACTCACTGTGGGAGCCGGCCCGGCCCCATTTCTGGGCATCCTGCCATTaGAGTCCTCATGCCCGGGGG +
Preference number: 4 (lower is better)
Translates to: SHPVNQLHSLWEPARPHFWASCH*SPHARG
Trigger: CCCCCGGGCATGAGGACTGCAATGGCAGGATGCCCA...GAAATGGGGCCGGGCCGGCTCCCACAGTGAGTGCAGTTGATTCACTGGGTGACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR GCA 90 bp GAGGCTCTCTGGAGCGGGCAGTGTTGGGCTTGGACCGAGCCATCCCCACAGGTCAGACGTCTTTGGCGATaGTGGGCATCCTGCCATTGC +
Preference number: 4 (lower is better)
Translates to: EALWSGQCWAWTEPSPQVRRLWR*WASCHC
Trigger: GCAATGGCAGGATGCCCAGCATCGCCAAAGACGTCT...GACCTGTGGGGATGGCTCGGTCCAAGCCCAACACTGCCCGCTCCAGAGAGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp AGTCACCCAGTGAATCAACTGCACTCACTGTGGGAGCCGGCCCGGCCCCATTTCCTGCGTAGGTACGCCTaGTCGCCGAAGTACAGGCCC +
Preference number: 4 (lower is better)
Translates to: SHPVNQLHSLWEPARPHFLRRYA*SPKYRP
Trigger: GGGCCTGTACTTCGGCGAGCAGGCGTACCTACGCAG...GAAATGGGGCCGGGCCGGCTCCCACAGTGAGTGCAGTTGATTCACTGGGTGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR GCA 90 bp GAATTCGGTCAGAGCTGCTTTGCCTTGAACCTACTGGGGCGGGGGCATAGTTGCGCAGGGGGCGTAGGGTaGGCAGGAGCCGCAAGACTC +
Preference number: 4 (lower is better)
Translates to: EFGQSCFALNLLGRGHSCAGGVG*AGAARL
Trigger: GAGTCTTGCGGCTCCTGCGCACCCTACGCCCCCTGC...GCAACTATGCCCCCGCCCCAGTAGGTTCAAGGCAAAGCAGCTCTGACCGAATTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp CTCTCCTCCCCTCCCCTCAAGCTAGGGATCACAGGCCTCTTCCAGACCCGCCTTAGAGGAGGCCCAGGTTaGCCACCTGGGGCAAAGCTT +
Preference number: 4 (lower is better)
Translates to: LSSPPLKLGITGLFQTRLRGGPG*PPGAKL
Trigger: AAGCTTTGCCCCAGGTGGGCAACCTGGGCCTCCTCT...AAGGCGGGTCTGGAAGAGGCCTGTGATCCCTAGCTTGAGGGGAGGGGAGGAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR GCA 90 bp GGGGACAGCACAGTGTCCAGGAACAGCCACAGCTCAGCGCCCATATGGGGGATATGGCATGCCGGCTCATaGCCTCGCACGGGTTCTCGT +
Preference number: 4 (lower is better)
Translates to: GDSTVSRNSHSSAPIWGIWHAGS*PRTGSR
Trigger: ACGAGAACCCGTGCGAGGGCATGAGCCGGCATGCCA...TATCCCCCATATGGGCGCTGAGCTGTGGCTGTTCCTGGACACTGTGCTGTCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp GGTCAGAGCTGCTTTGCCTTGAACCTACTGGGGCGGGGGCATAGTTGCTCAGGAGGCTGCTCAGGCAGCTaGGCTCGTCGTGGGTGCAGT +
Preference number: 4 (lower is better)
Translates to: GQSCFALNLLGRGHSCSGGCSGS*ARRGCS
Trigger: ACTGCACCCACGACGAGCGCAGCTGCCTGAGCAGCC...TCCTGAGCAACTATGCCCCCGCCCCAGTAGGTTCAAGGCAAAGCAGCTCTGACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp CCCTTGCACGGTGGTGCCCTCGGCCTTTGGTTGGGTCCTTCCCCTCCCAGTCCCTTGGGGGTGCTTGACTaGTGTCATGTTTCAGCCAGG +
Preference number: 4 (lower is better)
Translates to: PLHGGALGLWLGPSPPSPLGVLD*CHVSAR
Trigger: CCTGGCTGAAACATGACAGCAGTCAAGCACCCCCAA...GGGACTGGGAGGGGAAGGACCCAACCAAAGGCCGAGGGCACCACCGTGCAAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR GCA 90 bp TGGACCCTGGAGCCTTCGCTCATGCCCATCCCTTTGCCTAGAACACCTGCCTCGGATGCCCAGGAGCCCTaGAGCGCAATCTTGGGGAGG +
Preference number: 4 (lower is better)
Translates to: WTLEPSLMPIPLPRTPASDAQEP*SAILGR
Trigger: CCTCCCCAAGATTGCGCTGCAGGGCTCCTGGGCATC...CGAGGCAGGTGTTCTAGGCAAAGGGATGGGCATGAGCGAAGGCTCCAGGGTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp CTGAAGCCCTCGGAGGGGGTCTTAGCAAAGGCAAGGTTATTGCTGAAGTACAGCGCGTGGTCTGCAGGCTaGCCGCGGAGCTGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: LKPSEGVLAKARLLLKYSAWSAG*PRSCWG
Trigger: GCCCCAGCAGCTCCGCGGGCAGCCTGCAGACCACGC...GCTGTACTTCAGCAATAACCTTGCCTTTGCTAAGACCCCCTCCGAGGGCTTCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp CTGCCTCGAGGTGTCTGCTTGCAGAGTCACACGGTTCAGGGTAAGGGGAGGTTTTGGTGGAGCCCCCGCTaGTGTGGCTGCGCTGATGCG +
Preference number: 4 (lower is better)
Translates to: LPRGVCLQSHTVQGKGRFWWSPR*CGCADA
Trigger: CGCATCAGCGCAGCCACAGCAGCGGGGGCTCCACCA...AAACCTCCCCTTACCCTGAACCGTGTGACTCTGCAAGCAGACACCTCGAGGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp GGCCGTCTCTGCACAGATGCCAAGGTGCCTGCCCACCACCGCTCTACGGAGCCCCTGAAGTACAGCATCTaGAAACTCGTGGCCCCTGCA +
Preference number: 4 (lower is better)
Translates to: GRLCTDAKVPAHHRSTEPLKYSI*KLVAPA
Trigger: TGCAGGGGCCACGAGTTTGCAGATGCTGTACTTCAG...GGGCTCCGTAGAGCGGTGGTGGGCAGGCACCTTGGCATCTGTGCAGAGACGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp AGTACAGCATCTGCAAACTCGTGGCCCCTGCAGCCTCTCCAGATCACTGCCACCGCATCCTGGGCTGGCTaGTTCCCCTCTCCAGGGCTC +
Preference number: 4 (lower is better)
Translates to: STASANSWPLQPLQITATASWAG*FPSPGL
Trigger: GAGCCCTGGAGAGGGGAAGCAGCCAGCCCAGGATGC...GGTGGCAGTGATCTGGAGAGGCTGCAGGGGCCACGAGTTTGCAGATGCTGTACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp GCACAGATGCCAAGGTGCCTGCCCACCACCGCTCTACGGAGCCCAGCAGACAGCGTTTCACGTCAGACCTaGCTAGGACGTGTTCCCTGC +
Preference number: 4 (lower is better)
Translates to: AQMPRCLPTTALRSPADSVSRQT*LGRVPC
Trigger: GCAGGGAACACGTCCTAGGCAGGTCTGACGTGAAAC...GCTGTCTGCTGGGCTCCGTAGAGCGGTGGTGGGCAGGCACCTTGGCATCTGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp GAGGCTCTCTGGAGCGGGCAGTGTTGGGCTTGGACCGAGCCATCCCCACAGGTCCTGCCTCGAGGTGTCTaGTTGCAGAGTCACACGGTT +
Preference number: 4 (lower is better)
Translates to: EALWSGQCWAWTEPSPQVLPRGV*LQSHTV
Trigger: AACCGTGTGACTCTGCAAGCAGACACCTCGAGGCAG...GACCTGTGGGGATGGCTCGGTCCAAGCCCAACACTGCCCGCTCCAGAGAGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp GGCCAGAATCCCAGAGCATCAGACAAAAGCCCCGTCCAGGCCCTGGCCCACCTCAGGAACAAGGTCAAGTaGCTGGGATCGGCAGGTGGG +
Preference number: 4 (lower is better)
Translates to: GQNPRASDKSPVQALAHLRNKVK*LGSAGG
Trigger: CCCACCTGCCGATCCCAGGCACTTGACCTTGTTCCT...GAGGTGGGCCAGGGCCTGGACGGGGCTTTTGTCTGATGCTCTGGGATTCTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp CCTAGTAATCAAGCCCCCACTCACACCCACCCAGAGCACCCAGGGTGTCCTCCCTTGCCCACAGACCAGTaGTCTAGGGCCTGGGAGGTG +
Preference number: 4 (lower is better)
Translates to: PSNQAPTHTHPEHPGCPPLPTDQ*SRAWEV
Trigger: CACCTCCCAGGCCCTAGAGCACTGGTCTGTGGGCAA...GGGAGGACACCCTGGGTGCTCTGGGTGGGTGTGAGTGGGGGCTTGATTACTAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR GCA 90 bp ATCACAGGCCTCTTCCAGACCCGCCTTGGGGTCCTCCCCACACTCTGCTGTCCCAGCACCCCGCCACCCTaGAAAACCTCCAGTACTCCT +
Preference number: 4 (lower is better)
Translates to: ITGLFQTRLGVLPTLCCPSTPPP*KTSSTP
Trigger: AGGAGTACTGGAGGTTTTGCAGGGTGGCGGGGTGCT...GGGACAGCAGAGTGTGGGGAGGACCCCAAGGCGGGTCTGGAAGAGGCCTGTGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR GCA 90 bp CCTAGTAATCAAGCCCCCACTCACACCCACCCAGAGCACCCAGGGTGTCCTCCCAGGGAGTTTGTGTCCTaGCCGCCAGAGCACACAGCC +
Preference number: 4 (lower is better)
Translates to: PSNQAPTHTHPEHPGCPPREFVS*PPEHTA
Trigger: GGCTGTGTGCTCTGGCGGGCAGGACACAAACTCCCT...GGGAGGACACCCTGGGTGCTCTGGGTGGGTGTGAGTGGGGGCTTGATTACTAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR CCA 90 bp CAGCACAGTGTCCAGGAACAGCCACAGCTCAGCGCCCATATGGGGGATAAAAGGCTCCGTGGTGACTCCTaGCTCAGCGGCTGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: QHSVQEQPQLSAHMGDKRLRGDS*LSGWGC
Trigger: GCAGCCCCAGCCGCTGAGCCAGGAGTCACCACGGAG...CCTTTTATCCCCCATATGGGCGCTGAGCTGTGGCTGTTCCTGGACACTGTGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp AGTTTGTGTCCTGCCCGCCAGAGCACACAGCCTGGTGTGACGGGTCAGACAGTCACCAGTTCCGGGGGCTaGTGGTCTGTCGCAGGCAGA +
Preference number: 4 (lower is better)
Translates to: SLCPARQSTQPGVTGQTVTSSGG*WSVAGR
Trigger: TCTGCCTGCGACAGACCACCAGCCCCCGGAACTGGT...GACTGTCTGACCCGTCACACCAGGCTGTGTGCTCTGGCGGGCAGGACACAAACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR CCA 90 bp GCACAGATGCCAAGGTGCCTGCCCACCACCGCTCTACGGAGCCCAGCAGACAGCATGTCGTCGCACGGCTaGTACATGCCAAGTGTCACG +
Preference number: 4 (lower is better)
Translates to: AQMPRCLPTTALRSPADSMSSHG*YMPSVT
Trigger: CGTGACACTTGGCATGTACCAGCCGTGCGACGACAT...GCTGTCTGCTGGGCTCCGTAGAGCGGTGGTGGGCAGGCACCTTGGCATCTGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp TGGACCCTGGAGCCTTCGCTCATGCCCATCCCTTTGCCTAGAACACCTGCCTCGCTCCGGCTGGTAGTATaGGGGCAAGGCCACATCCCC +
Preference number: 4 (lower is better)
Translates to: WTLEPSLMPIPLPRTPASLRLVV*GQGHIP
Trigger: GGGGATGTGGCCTTGCCCCCATACTACCAGCCGGAG...CGAGGCAGGTGTTCTAGGCAAAGGGATGGGCATGAGCGAAGGCTCCAGGGTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp GAGTTTGTGTCCTGCCCGCCAGAGCACACAGCCTGGTGTGACGGGTCAGACAGTTTGATGGCACCCTTGTaGGGGTTGGCGCTGCCCGTG +
Preference number: 4 (lower is better)
Translates to: EFVSCPPEHTAWCDGSDSLMAPL*GLALPV
Trigger: CACGGGCAGCGCCAACCCCCACAAGGGTGCCATCAA...ACTGTCTGACCCGTCACACCAGGCTGTGTGCTCTGGCGGGCAGGACACAAACTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR CCA 90 bp TGTCCTGGCCAGTGGATCACAGCTTCCCTGGTTCTCATCTCTGTCACCCACAGGGGCAGCAAGGGCAGCTaGCGGGATCGGAAGCCAGCG +
Preference number: 4 (lower is better)
Translates to: CPGQWITASLVLISVTHRGSKGS*RDRKPA
Trigger: CGCTGGCTTCCGATCCCGCCAGCTGCCCTTGCTGCC...CCTGTGGGTGACAGAGATGAGAACCAGGGAAGCTGTGATCCACTGGCCAGGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp CTGCCTCGAGGTGTCTGCTTGCAGAGTCACACGGTTCAGGGTAAGGGGAGGTTTCGGCCGTCCTCATGCTaGCAGCAAGGGCAGCTGGCG +
Preference number: 4 (lower is better)
Translates to: LPRGVCLQSHTVQGKGRFRPSSC*QQGQLA
Trigger: CGCCAGCTGCCCTTGCTGCCAGCATGAGGACGGCCG...AAACCTCCCCTTACCCTGAACCGTGTGACTCTGCAAGCAGACACCTCGAGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp ATCAAGCCCCCACTCACACCCACCCAGAGCACCCAGGGTGTCCTCCCCACTGCCTCCTGGGTGAGGATCTaGAACACAGTGACGATGGCC +
Preference number: 4 (lower is better)
Translates to: IKPPLTPTQSTQGVLPTASWVRI*NTVTMA
Trigger: GGCCATCGTCACTGTGTTCCAGATCCTCACCCAGGA...GGCAGTGGGGAGGACACCCTGGGTGCTCTGGGTGGGTGTGAGTGGGGGCTTGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR CCA 90 bp AAAGTCAAGTCTGTCTGCTTCCCTCCAACTGCGAGAGCTCAGGGTCAGCCAGGACGCGCTGCGGCCCCATaGCCCGTAGTAGGAGCTCCG +
Preference number: 4 (lower is better)
Translates to: KVKSVCFPPTARAQGQPGRAAAP*PVVGAP
Trigger: CGGAGCTCCTACTACGGGCCATGGGGCCGCAGCGCG...TCCTGGCTGACCCTGAGCTCTCGCAGTTGGAGGGAAGCAGACAGACTTGACTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp GCACAGATGCCAAGGTGCCTGCCCACCACCGCTCTACGGAGCCCAGCAGACAGCCGTCTTTGGCGATGCTaGGCATCCTGCCATTGCAGT +
Preference number: 4 (lower is better)
Translates to: AQMPRCLPTTALRSPADSRLWRC*ASCHCS
Trigger: ACTGCAATGGCAGGATGCCCAGCATCGCCAAAGACG...GCTGTCTGCTGGGCTCCGTAGAGCGGTGGTGGGCAGGCACCTTGGCATCTGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp GGTCAGAGCTGCTTTGCCTTGAACCTACTGGGGCGGGGGCATAGTTGCTCAGGAGGACCCAGCGGTAGTTaGCGGCCATGCAGTCCGAGC +
Preference number: 4 (lower is better)
Translates to: GQSCFALNLLGRGHSCSGGPSGS*RPCSPS
Trigger: GCTCGGACTGCATGGCCGCCAACTACCGCTGGGTCC...TCCTGAGCAACTATGCCCCCGCCCCAGTAGGTTCAAGGCAAAGCAGCTCTGACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp GCACAGATGCCAAGGTGCCTGCCCACCACCGCTCTACGGAGCCCAGCAGACAGCAGGGACATCAGAGCCTaGCCCAGGTTGTCGAAGTTG +
Preference number: 4 (lower is better)
Translates to: AQMPRCLPTTALRSPADSRDIRA*PRLSKL
Trigger: CAACTTCGACAACCTGGGCCAGGCTCTGATGTCCCT...GCTGTCTGCTGGGCTCCGTAGAGCGGTGGTGGGCAGGCACCTTGGCATCTGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp GCACAGATGCCAAGGTGCCTGCCCACCACCGCTCTACGGAGCCCAGCAGACAGCGGGTGTGACAATAGGTaGCATAGTAGGGCAGCCGCT +
Preference number: 4 (lower is better)
Translates to: AQMPRCLPTTALRSPADSGCDNR*HSRAAA
Trigger: AGCGGCTGCCCTACTATGCCACCTATTGTCACACCC...GCTGTCTGCTGGGCTCCGTAGAGCGGTGGTGGGCAGGCACCTTGGCATCTGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp CGGGTCAGACAGTCACCCAGTGAATCAACTGCACTCACTGTGGGAGCCGGCCCGACGCATGGGCTCAGGTaGGTCCAGCTCACCCTTGCT +
Preference number: 4 (lower is better)
Translates to: RVRQSPSESTALTVGAGPTHGLR*VQLTLA
Trigger: AGCAAGGGTGAGCTGGACCCACCTGAGCCCATGCGT...CGGGCCGGCTCCCACAGTGAGTGCAGTTGATTCACTGGGTGACTGTCTGACCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR CCA 90 bp TGGACCCTGGAGCCTTCGCTCATGCCCATCCCTTTGCCTAGAACACCTGCCTCGGGTCTCCCACACGCATaGGCTCAGGTGGGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: WTLEPSLMPIPLPRTPASGLPHA*AQVGPA
Trigger: AGCTGGACCCACCTGAGCCCATGCGTGTGGGAGACC...CGAGGCAGGTGTTCTAGGCAAAGGGATGGGCATGAGCGAAGGCTCCAGGGTCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp CTGAATTGCACCTCTTCTCCAGGGCCTGGTGCCCTCAGAGGCCTGAGGGTCCTCCTGGGCCTTTCTGGCTaGCAGACACTGCAGGGTGGA +
Preference number: 4 (lower is better)
Translates to: LNCTSSPGPGALRGLRVLLGLSG*QTLQGG
Trigger: TCCACCCTGCAGTGTCTGCCAGCCAGAAAGGCCCAG...GAGGACCCTCAGGCCTCTGAGGGCACCAGGCCCTGGAGAAGAGGTGCAATTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp GAGGCTCTCTGGAGCGGGCAGTGTTGGGCTTGGACCGAGCCATCCCCACAGGTCTTTTCTGGGCCTTTCTaGCTGGCAGACACTGCAGGG +
Preference number: 4 (lower is better)
Translates to: EALWSGQCWAWTEPSPQVFSGPF*LADTAG
Trigger: CCCTGCAGTGTCTGCCAGCCAGAAAGGCCCAGAAAA...GACCTGTGGGGATGGCTCGGTCCAAGCCCAACACTGCCCGCTCCAGAGAGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp CTGAATTGCACCTCTTCTCCAGGGCCTGGTGCCCTCAGAGGCCTGAGGGTCCTCATCTCTTCCTCTTGCTaGCGGCGTCTCCCGGCTCCA +
Preference number: 4 (lower is better)
Translates to: LNCTSSPGPGALRGLRVLISSSC*RRLPAP
Trigger: TGGAGCCGGGAGACGCCGCCAGCAAGAGGAAGAGAT...GAGGACCCTCAGGCCTCTGAGGGCACCAGGCCCTGGAGAAGAGGTGCAATTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp TGGACCCTGGAGCCTTCGCTCATGCCCATCCCTTTGCCTAGAACACCTGCCTCGGGCCCTGAAGCATCCTaGGCTGGCTGCTTCCCCTCT +
Preference number: 4 (lower is better)
Translates to: WTLEPSLMPIPLPRTPASGPEAS*AGCFPS
Trigger: AGAGGGGAAGCAGCCAGCCCAGGATGCTTCAGGGCC...CGAGGCAGGTGTTCTAGGCAAAGGGATGGGCATGAGCGAAGGCTCCAGGGTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp CCACCCCTGCCTAGAATTCGGTCAGAGCTGCTTTGCCTTGAACCTACTGGGGCGGCCCCCAGGGAGGACTaGGCAGTTCCTTCCGCCACA +
Preference number: 4 (lower is better)
Translates to: PPLPRIRSELLCLEPTGAAPRED*AVPSAT
Trigger: TGTGGCGGAAGGAACTGCCCAGTCCTCCCTGGGGGC...CGCCCCAGTAGGTTCAAGGCAAAGCAGCTCTGACCGAATTCTAGGCAGGGGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp GGCCGTCTCTGCACAGATGCCAAGGTGCCTGCCCACCACCGCTCTACGGAGCCCACTTGTCCTGGCCAGTaGATCACAGCTTCCCTGGTT +
Preference number: 4 (lower is better)
Translates to: GRLCTDAKVPAHHRSTEPTCPGQ*ITASLV
Trigger: AACCAGGGAAGCTGTGATCCACTGGCCAGGACAAGT...GGGCTCCGTAGAGCGGTGGTGGGCAGGCACCTTGGCATCTGTGCAGAGACGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp GCACAGATGCCAAGGTGCCTGCCCACCACCGCTCTACGGAGCCCAGCAGACAGCTCTGAGCTGAGGATTTaGGGGAAGACAGCAGACGGG +
Preference number: 4 (lower is better)
Translates to: AQMPRCLPTTALRSPADSSELRI*GKTADG
Trigger: CCCGTCTGCTGTCTTCCCCCAAATCCTCAGCTCAGA...GCTGTCTGCTGGGCTCCGTAGAGCGGTGGTGGGCAGGCACCTTGGCATCTGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp CAGCACAGTGTCCAGGAACAGCCACAGCTCAGCGCCCATATGGGGGATAAAAGGCGCAGCAAACGGGGCTaGGGTTGGCCCTGGAAGCGG +
Preference number: 4 (lower is better)
Translates to: QHSVQEQPQLSAHMGDKRRSKRG*GWPWKR
Trigger: CCGCTTCCAGGGCCAACCCCAGCCCCGTTTGCTGCG...CCTTTTATCCCCCATATGGGCGCTGAGCTGTGGCTGTTCCTGGACACTGTGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp ATCACAGGCCTCTTCCAGACCCGCCTTGGGGTCCTCCCCACACTCTGCTGTCCCGGCCCATGCAAAGTCTaGCAATGCCGGCTTCCGAGA +
Preference number: 4 (lower is better)
Translates to: ITGLFQTRLGVLPTLCCPGPCKV*QCRLPR
Trigger: TCTCGGAAGCCGGCATTGCCAGACTTTGCATGGGCC...GGGACAGCAGAGTGTGGGGAGGACCCCAAGGCGGGTCTGGAAGAGGCCTGTGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR CCA 90 bp CACCCCCACAGCGGAGCCCTCAGTGCTTCAGACCTCTGTGTGCCCGTGGGTAGGTTGGACTTCCAGGCCTaGCTTAGATCCTGCCCCTTG +
Preference number: 4 (lower is better)
Translates to: HPHSGALSASDLCVPVGRLDFQA*LRSCPL
Trigger: CAAGGGGCAGGATCTAAGCCAGGCCTGGAAGTCCAA...CCTACCCACGGGCACACAGAGGTCTGAAGCACTGAGGGCTCCGCTGTGGGGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR CCA 90 bp TCACCCAGTGAATCAACTGCACTCACTGTGGGAGCCGGCCCGGCCCCATTTCCCTGGGTAGGAGGGCTGTaGCCCTGGCCAATCCAGTAC +
Preference number: 4 (lower is better)
Translates to: SPSESTALTVGAGPAPFPWVGGL*PWPIQY
Trigger: GTACTGGATTGGCCAGGGCCACAGCCCTCCTACCCA...GGGAAATGGGGCCGGGCCGGCTCCCACAGTGAGTGCAGTTGATTCACTGGGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401624.5
3UTR CAA 72 bp TTCCCAAACCCCCTTGCACGGTGGTGCCCTCGGCCTTaGGTTGGGTCCTTCCCCTCCCAGTCCCTTGGACTT +
Preference number: 4 (lower is better)
Translates to: FPNPLARWCPRP*VGSFPSQSLGL
Trigger: AAGTCCAAGGGACTGGGAGGGGAAGGACCCAACCAAAGGCCGAGGGCACCACCGTGCAAGGGGGTTTGGGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR TCA 90 bp AGTTTGTGTCCTGCCCGCCAGAGCACACAGCCTGGTGTGACGGGTCAGACAGTCGGTTGCACACCATCTTaGTGCACCAGTTCCGGGGGC +
Preference number: 4 (lower is better)
Translates to: SLCPARQSTQPGVTGQTVGCTPS*CTSSGG
Trigger: GCCCCCGGAACTGGTGCATCAAGATGGTGTGCAACC...GACTGTCTGACCCGTCACACCAGGCTGTGTGCTCTGGCGGGCAGGACACAAACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR TCA 90 bp GGATCACAGGCCTCTTCCAGACCCGCCTTGGGGTCCTCCCCACACTCTGCTGTCGGATGGCTGACAGGTTaGTGTTCTGAAGGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: GSQASSRPALGSSPHSAVGWLTG*CSEGPG
Trigger: CCCTGGACCTTCAGAACATCAACCTGTCAGCCATCC...GACAGCAGAGTGTGGGGAGGACCCCAAGGCGGGTCTGGAAGAGGCCTGTGATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR TCA 90 bp CGTTCCCAAACCCCCTTGCACGGTGGTGCCCTCGGCCTTTGGTTGGGTCCTTCCCACGGTGCGGATGGCTaGCAGGTTGATGTTCTGAAG +
Preference number: 4 (lower is better)
Translates to: RSQTPLHGGALGLWLGPSHGADG*QVDVLK
Trigger: CTTCAGAACATCAACCTGTCAGCCATCCGCACCGTG...GGAAGGACCCAACCAAAGGCCGAGGGCACCACCGTGCAAGGGGGTTTGGGAACG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR TCA 90 bp GGATCACAGGCCTCTTCCAGACCCGCCTTGGGGTCCTCCCCACACTCTGCTGTCAGTAACGGTTCCAGTTaGCACAGAGGCCGCTGGCAT +
Preference number: 4 (lower is better)
Translates to: GSQASSRPALGSSPHSAVSNGSS*HRGRWH
Trigger: ATGCCAGCGGCCTCTGTGTCAACTGGAACCGTTACT...GACAGCAGAGTGTGGGGAGGACCCCAAGGCGGGTCTGGAAGAGGCCTGTGATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR TCA 90 bp GGCCGTCTCTGCACAGATGCCAAGGTGCCTGCCCACCACCGCTCTACGGAGCCCGGGCAAACATGCTGGTaGAGACCACATTGCAGATCT +
Preference number: 4 (lower is better)
Translates to: GRLCTDAKVPAHHRSTEPGQTCW*RPHCRS
Trigger: AGATCTGCAATGTGGTCTTCACCAGCATGTTTGCCC...GGGCTCCGTAGAGCGGTGGTGGGCAGGCACCTTGGCATCTGTGCAGAGACGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR TCA 90 bp GCACAGATGCCAAGGTGCCTGCCCACCACCGCTCTACGGAGCCCAGCAGACAGCTGTAGTTGGACACGGTaGGAAAGATGCGTTCGGTGC +
Preference number: 4 (lower is better)
Translates to: AQMPRCLPTTALRSPADSCSWTR*ERCVRC
Trigger: GCACCGAACGCATCTTTCTCACCGTGTCCAACTACA...GCTGTCTGCTGGGCTCCGTAGAGCGGTGGTGGGCAGGCACCTTGGCATCTGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR TCA 90 bp ATCAAGCCCCCACTCACACCCACCCAGAGCACCCAGGGTGTCCTCCCCACTGCCTATAGTTGCAGTACTTaGGGGCTGTCTCCAGGGACG +
Preference number: 4 (lower is better)
Translates to: IKPPLTPTQSTQGVLPTAYSCST*GLSPGT
Trigger: CGTCCCTGGAGACAGCCCTCAAGTACTGCAACTATA...GGCAGTGGGGAGGACACCCTGGGTGCTCTGGGTGGGTGTGAGTGGGGGCTTGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR TCA 90 bp GCACAGATGCCAAGGTGCCTGCCCACCACCGCTCTACGGAGCCCAGCAGACAGCTATAGTTGCAGTACTTaGGGGCTGTCTCCAGGGACG +
Preference number: 4 (lower is better)
Translates to: AQMPRCLPTTALRSPADSYSCST*GLSPGT
Trigger: CGTCCCTGGAGACAGCCCTCAAGTACTGCAACTATA...GCTGTCTGCTGGGCTCCGTAGAGCGGTGGTGGGCAGGCACCTTGGCATCTGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR TCA 90 bp GTGTCCTGCCCGCCAGAGCACACAGCCTGGTGTGACGGGTCAGACAGTCACCCAGGTTCCATCGGTCCTTaGAGAAGCGCCTCAGACCAA +
Preference number: 4 (lower is better)
Translates to: VSCPPEHTAWCDGSDSHPGSIGP*RSASDQ
Trigger: TTGGTCTGAGGCGCTTCTTCAAGGACCGATGGAACC...TGGGTGACTGTCTGACCCGTCACACCAGGCTGTGTGCTCTGGCGGGCAGGACAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR TCA 90 bp TGGACCCTGGAGCCTTCGCTCATGCCCATCCCTTTGCCTAGAACACCTGCCTCGCCGACAGGTTGTCGATaGTGGTCAGCTCCCCCTCCA +
Preference number: 4 (lower is better)
Translates to: WTLEPSLMPIPLPRTPASPTGCR*WSAPPP
Trigger: TGGAGGGGGAGCTGACCATCATCGACAACCTGTCGG...CGAGGCAGGTGTTCTAGGCAAAGGGATGGGCATGAGCGAAGGCTCCAGGGTCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR TCA 90 bp GGCCAGAATCCCAGAGCATCAGACAAAAGCCCCGTCCAGGCCCTGGCCCACCTCCTCCCTTCATCTCCCTaGCCCTTAGTCTTCCCATGG +
Preference number: 4 (lower is better)
Translates to: GQNPRASDKSPVQALAHLLPSSP*PLVFPW
Trigger: CCATGGGAAGACTAAGGGTCAGGGAGATGAAGGGAG...GAGGTGGGCCAGGGCCTGGACGGGGCTTTTGTCTGATGCTCTGGGATTCTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402142.4
CDS-3UTR TCA 90 bp TTCCCAAACCCCCTTGCACGGTGGTGCCCTCGGCCTTTGGTTGGGTCCTTCCCCAGCTCTCTTCCCGAGTaGTCATTTCCAGGGGAGGCA +
Preference number: 4 (lower is better)
Translates to: FPNPLARWCPRPLVGSFPSSLPE*SFPGEA
Trigger: TGCCTCCCCTGGAAATGATCACTCGGGAAGAGAGCT...GGGGAAGGACCCAACCAAAGGCCGAGGGCACCACCGTGCAAGGGGGTTTGGGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR TCA 90 bp GGCCAGAATCCCAGAGCATCAGACAAAAGCCCCGTCCAGGCCCTGGCCCACCTCAGCTCTCTTCCCGAGTaGTCATTTCCAGGGGAGGCA +
Preference number: 4 (lower is better)
Translates to: GQNPRASDKSPVQALAHLSSLPE*SFPGEA
Trigger: TGCCTCCCCTGGAAATGATCACTCGGGAAGAGAGCT...GAGGTGGGCCAGGGCCTGGACGGGGCTTTTGTCTGATGCTCTGGGATTCTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000402142.4
CDS-3UTR GCA 90 bp AGGGAGTTTGTGTCCTGCCCGCCAGAGCACACAGCCTGGTGTGACGGGTCAGACAGACCTGCAGGATCTTaGAGCGGTCGGACAGGCAGT +
Preference number: 4 (lower is better)
Translates to: REFVSCPPEHTAWCDGSDRPAGS*SGRTGS
Trigger: ACTGCCTGTCCGACCGCTGCAAGATCCTGCAGGTCT...GTCTGACCCGTCACACCAGGCTGTGTGCTCTGGCGGGCAGGACACAAACTCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR GCA 90 bp CCCTTGCACGGTGGTGCCCTCGGCCTTTGGTTGGGTCCTTCCCCTCCCAGTCCCAAGTCATCAAAGACCTaGAGGATCTTGCAGCGGTCG +
Preference number: 4 (lower is better)
Translates to: PLHGGALGLWLGPSPPSPKSSKT*RILQRS
Trigger: CGACCGCTGCAAGATCCTGCAGGTCTTTGATGACTT...GGGACTGGGAGGGGAAGGACCCAACCAAAGGCCGAGGGCACCACCGTGCAAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR GCA 90 bp CCTAGTAATCAAGCCCCCACTCACACCCACCCAGAGCACCCAGGGTGTCCTCCCAGGCCCGCCCAGAGCTaGACACCTATGATGCCAAAG +
Preference number: 4 (lower is better)
Translates to: PSNQAPTHTHPEHPGCPPRPAQS*TPMMPK
Trigger: CTTTGGCATCATAGGTGTGCAGCTCTGGGCGGGCCT...GGGAGGACACCCTGGGTGCTCTGGGTGGGTGTGAGTGGGGGCTTGATTACTAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR GCA 90 bp AGTACAGCATCTGCAAACTCGTGGCCCCTGCAGCCTCTCCAGATCACTGCCACCCGTAGCTGGCCACCGTaGTGGAGGACAGGTAGCGCT +
Preference number: 4 (lower is better)
Translates to: STASANSWPLQPLQITATRSWPP*WRTGSA
Trigger: AGCGCTACCTGTCCTCCAGCACGGTGGCCAGCTACG...GGTGGCAGTGATCTGGAGAGGCTGCAGGGGCCACGAGTTTGCAGATGCTGTACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp CCACCCCTGCCTAGAATTCGGTCAGAGCTGCTTTGCCTTGAACCTACTGGGGCGTGGGCATCCTGCCATTaGAGTCCTCATGCCCGGGGG +
Preference number: 4 (lower is better)
Translates to: PPLPRIRSELLCLEPTGAWASCH*SPHARG
Trigger: CCCCCGGGCATGAGGACTGCAATGGCAGGATGCCCA...CGCCCCAGTAGGTTCAAGGCAAAGCAGCTCTGACCGAATTCTAGGCAGGGGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp TCACCCAGTGAATCAACTGCACTCACTGTGGGAGCCGGCCCGGCCCCATTTCCCAGACGTCGATCATCTTaGGGACGCGGAAGCACAGGG +
Preference number: 4 (lower is better)
Translates to: SPSESTALTVGAGPAPFPRRRSS*GRGSTG
Trigger: CCCTGTGCTTCCGCGTCCGCAAGATGATCGACGTCT...GGGAAATGGGGCCGGGCCGGCTCCCACAGTGAGTGCAGTTGATTCACTGGGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR GCA 90 bp CCACCCCTGCCTAGAATTCGGTCAGAGCTGCTTTGCCTTGAACCTACTGGGGCGAGATGCGTTCGGTGCTaGCGGCCTCGATCTGAGGCC +
Preference number: 4 (lower is better)
Translates to: PPLPRIRSELLCLEPTGARCVRC*RPRSEA
Trigger: GGCCTCAGATCGAGGCCGGCAGCACCGAACGCATCT...CGCCCCAGTAGGTTCAAGGCAAAGCAGCTCTGACCGAATTCTAGGCAGGGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp GGCCGTCTCTGCACAGATGCCAAGGTGCCTGCCCACCACCGCTCTACGGAGCCCCCAACCATCCTTGGATaGCAGGACAAAGAGGGACAT +
Preference number: 4 (lower is better)
Translates to: GRLCTDAKVPAHHRSTEPPTILG*QDKEGH
Trigger: ATGTCCCTCTTTGTCCTGGCATCCAAGGATGGTTGG...GGGCTCCGTAGAGCGGTGGTGGGCAGGCACCTTGGCATCTGTGCAGAGACGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp GGCCAGAATCCCAGAGCATCAGACAAAAGCCCCGTCCAGGCCCTGGCCCACCTCTGGTTGGTCACAGGCTaGTGGTCCACAGCAACAGCA +
Preference number: 4 (lower is better)
Translates to: GQNPRASDKSPVQALAHLWLVTG*WSTATA
Trigger: TGCTGTTGCTGTGGACCAGCAGCCTGTGACCAACCA...GAGGTGGGCCAGGGCCTGGACGGGGCTTTTGTCTGATGCTCTGGGATTCTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp GGGGACAGCACAGTGTCCAGGAACAGCCACAGCTCAGCGCCCATATGGGGGATAAGAGGAGGCCCAGGTTaGCCACCTGGGGCAAAGCTT +
Preference number: 4 (lower is better)
Translates to: GDSTVSRNSHSSAPIWGIRGGPG*PPGAKL
Trigger: AAGCTTTGCCCCAGGTGGGCAACCTGGGCCTCCTCT...TATCCCCCATATGGGCGCTGAGCTGTGGCTGTTCCTGGACACTGTGCTGTCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp GAATTCGGTCAGAGCTGCTTTGCCTTGAACCTACTGGGGCGGGGGCATAGTTGCTGCGCTCGTCGTGGGTaGAGTCCCGCAGCGTGTCCT +
Preference number: 4 (lower is better)
Translates to: EFGQSCFALNLLGRGHSCCARRG*SPAACP
Trigger: AGGACACGCTGCGGGACTGCACCCACGACGAGCGCA...GCAACTATGCCCCCGCCCCAGTAGGTTCAAGGCAAAGCAGCTCTGACCGAATTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp GCAGGGAGTTTGTGTCCTGCCCGCCAGAGCACACAGCCTGGTGTGACGGGTCAGTTGATGAGCACGAACTaGGCGGTGAGCACGAAGCTC +
Preference number: 4 (lower is better)
Translates to: AGSLCPARQSTQPGVTGQLMSTN*AVSTKL
Trigger: GAGCTTCGTGCTCACCGCGCAGTTCGTGCTCATCAA...CTGACCCGTCACACCAGGCTGTGTGCTCTGGCGGGCAGGACACAAACTCCCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR GCA 90 bp TGGACCCTGGAGCCTTCGCTCATGCCCATCCCTTTGCCTAGAACACCTGCCTCGTGGGGAGGGTTCCAGTaGCAGTGCCCTTTTCTGGGC +
Preference number: 4 (lower is better)
Translates to: WTLEPSLMPIPLPRTPASWGGFQ*QCPFLG
Trigger: GCCCAGAAAAGGGCACTGGCACTGGAACCCTCCCCA...CGAGGCAGGTGTTCTAGGCAAAGGGATGGGCATGAGCGAAGGCTCCAGGGTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp GAGGCTCTCTGGAGCGGGCAGTGTTGGGCTTGGACCGAGCCATCCCCACAGGTCGTGTGGACGAAGTATTaGTGTCTGCTCCTGGCTCCT +
Preference number: 4 (lower is better)
Translates to: EALWSGQCWAWTEPSPQVVWTKY*CLLLAP
Trigger: AGGAGCCAGGAGCAGACAGCAATACTTCGTCCACAC...GACCTGTGGGGATGGCTCGGTCCAAGCCCAACACTGCCCGCTCCAGAGAGCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp GGTCAGAGCTGCTTTGCCTTGAACCTACTGGGGCGGGGGCATAGTTGCTCAGGACTCCAAGCAAGCCACTaGCGGCTCAGTCTCCCGCAC +
Preference number: 4 (lower is better)
Translates to: GQSCFALNLLGRGHSCSGLQASH*RLSLPH
Trigger: GTGCGGGAGACTGAGCCGGCAGTGGCTTGCTTGGAG...TCCTGAGCAACTATGCCCCCGCCCCAGTAGGTTCAAGGCAAAGCAGCTCTGACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp CTGCCTCGAGGTGTCTGCTTGCAGAGTCACACGGTTCAGGGTAAGGGGAGGTTTGGGCGGGGGCATAGTTaGTCAGGACGGGGACAGCAC +
Preference number: 4 (lower is better)
Translates to: LPRGVCLQSHTVQGKGRFGRGHS*SGRGQH
Trigger: GTGCTGTCCCCGTCCTGAGCAACTATGCCCCCGCCC...AAACCTCCCCTTACCCTGAACCGTGTGACTCTGCAAGCAGACACCTCGAGGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp GGCCAGAATCCCAGAGCATCAGACAAAAGCCCCGTCCAGGCCCTGGCCCACCTCGCCTCTCCAGATCACTaGCACCAACATGCTCCCAAC +
Preference number: 4 (lower is better)
Translates to: GQNPRASDKSPVQALAHLASPDH*HQHAPN
Trigger: GTTGGGAGCATGTTGGTGGCAGTGATCTGGAGAGGC...GAGGTGGGCCAGGGCCTGGACGGGGCTTTTGTCTGATGCTCTGGGATTCTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp GAGGCTCTCTGGAGCGGGCAGTGTTGGGCTTGGACCGAGCCATCCCCACAGGTCAACACTGGTGGTGGCTaGCGCTTGGTTTCTCTACAC +
Preference number: 4 (lower is better)
Translates to: EALWSGQCWAWTEPSPQVNTGGG*RLVSLH
Trigger: GTGTAGAGAAACCAAGCGGCAGCCACCACCAGTGTT...GACCTGTGGGGATGGCTCGGTCCAAGCCCAACACTGCCCGCTCCAGAGAGCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp CAAACCCCCTTGCACGGTGGTGCCCTCGGCCTTTGGTTGGGTCCTTCCCCTCCCTTAGATCCTGCCCCTTaGCCACAGACCAGTGCTCTA +
Preference number: 4 (lower is better)
Translates to: QTPLHGGALGLWLGPSPPLDPAP*PQTSAL
Trigger: TAGAGCACTGGTCTGTGGGCAAGGGGCAGGATCTAA...GGGAGGGGAAGGACCCAACCAAAGGCCGAGGGCACCACCGTGCAAGGGGGTTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR GCA 90 bp CCAGTGAATCAACTGCACTCACTGTGGGAGCCGGCCCGGCCCCATTTCCCCACCGGTTATCATCCCTCCTaGACCCAGGCAGCTCACTCT +
Preference number: 4 (lower is better)
Translates to: PVNQLHSLWEPARPHFPTGYHPS*TQAAHS
Trigger: AGAGTGAGCTGCCTGGGTGCAGGAGGGATGATAACC...GGTGGGGAAATGGGGCCGGGCCGGCTCCCACAGTGAGTGCAGTTGATTCACTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR CCA 90 bp AGTACAGCATCTGCAAACTCGTGGCCCCTGCAGCCTCTCCAGATCACTGCCACCACCAGTTCCGGGGGCTaGTGGTCTGTCGCAGGCAGA +
Preference number: 4 (lower is better)
Translates to: STASANSWPLQPLQITATTSSGG*WSVAGR
Trigger: TCTGCCTGCGACAGACCACCAGCCCCCGGAACTGGT...GGTGGCAGTGATCTGGAGAGGCTGCAGGGGCCACGAGTTTGCAGATGCTGTACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp AGTCACCCAGTGAATCAACTGCACTCACTGTGGGAGCCGGCCCGGCCCCATTTCCGTAGACGTCGTCCTTaGACAGGCAGCACTCACGGC +
Preference number: 4 (lower is better)
Translates to: SHPVNQLHSLWEPARPHFRRRRP*TGSTHG
Trigger: GCCGTGAGTGCTGCCTGTCCAAGGACGACGTCTACG...GAAATGGGGCCGGGCCGGCTCCCACAGTGAGTGCAGTTGATTCACTGGGTGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR CCA 90 bp AAAGTCAAGTCTGTCTGCTTCCCTCCAACTGCGAGAGCTCAGGGTCAGCCAGGACACCCTTGTGGGGGTTaGCGCTGCCCGTGCGGCACA +
Preference number: 4 (lower is better)
Translates to: KVKSVCFPPTARAQGQPGHPCGG*RCPCGT
Trigger: TGTGCCGCACGGGCAGCGCCAACCCCCACAAGGGTG...TCCTGGCTGACCCTGAGCTCTCGCAGTTGGAGGGAAGCAGACAGACTTGACTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp GCCATGGGCCAGCAGGTACCAGCGCCATCAGCAACTAGGAGGGAAGTTCATTCAAGCTGGCCACCGTGCTaGAGGACAGGTAGCGCTGCC +
Preference number: 4 (lower is better)
Translates to: AMGQQVPAPSATRREVHSSWPPC*RTGSAA
Trigger: GGCAGCGCTACCTGTCCTCCAGCACGGTGGCCAGCT...TGAATGAACTTCCCTCCTAGTTGCTGATGGCGCTGGTACCTGCTGGCCCATGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp AAAGTCAAGTCTGTCTGCTTCCCTCCAACTGCGAGAGCTCAGGGTCAGCCAGGAGGCAGCAAGGGCAGCTaGCGGGATCGGAAGCCAGCG +
Preference number: 4 (lower is better)
Translates to: KVKSVCFPPTARAQGQPGGSKGS*RDRKPA
Trigger: CGCTGGCTTCCGATCCCGCCAGCTGCCCTTGCTGCC...TCCTGGCTGACCCTGAGCTCTCGCAGTTGGAGGGAAGCAGACAGACTTGACTTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp GGGGACAGCACAGTGTCCAGGAACAGCCACAGCTCAGCGCCCATATGGGGGATAGGGGGTCATGGGGATTaGGCAGAGCTTGGGATCTCC +
Preference number: 4 (lower is better)
Translates to: GDSTVSRNSHSSAPIWGIGGHGD*AELGIS
Trigger: GGAGATCCCAAGCTCTGCCCAATCCCCATGACCCCC...TATCCCCCATATGGGCGCTGAGCTGTGGCTGTTCCTGGACACTGTGCTGTCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp TGTCCTGGCCAGTGGATCACAGCTTCCCTGGTTCTCATCTCTGTCACCCACAGGCCAGGGCCACCAGCATaGGGTCCGGCTGCAGTGAGA +
Preference number: 4 (lower is better)
Translates to: CPGQWITASLVLISVTHRPGPPA*GPAAVR
Trigger: TCTCACTGCAGCCGGACCCCATGCTGGTGGCCCTGG...CCTGTGGGTGACAGAGATGAGAACCAGGGAAGCTGTGATCCACTGGCCAGGACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp GTGTCCTGCCCGCCAGAGCACACAGCCTGGTGTGACGGGTCAGACAGTCACCCACGTCTTTGGCGATGCTaGGCATCCTGCCATTGCAGT +
Preference number: 4 (lower is better)
Translates to: VSCPPEHTAWCDGSDSHPRLWRC*ASCHCS
Trigger: ACTGCAATGGCAGGATGCCCAGCATCGCCAAAGACG...TGGGTGACTGTCTGACCCGTCACACCAGGCTGTGTGCTCTGGCGGGCAGGACAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR CCA 90 bp GTGTCCTGCCCGCCAGAGCACACAGCCTGGTGTGACGGGTCAGACAGTCACCCAAGGGACATCAGAGCCTaGCCCAGGTTGTCGAAGTTG +
Preference number: 4 (lower is better)
Translates to: VSCPPEHTAWCDGSDSHPRDIRA*PRLSKL
Trigger: CAACTTCGACAACCTGGGCCAGGCTCTGATGTCCCT...TGGGTGACTGTCTGACCCGTCACACCAGGCTGTGTGCTCTGGCGGGCAGGACAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR CCA 90 bp CGTTCCCAAACCCCCTTGCACGGTGGTGCCCTCGGCCTTTGGTTGGGTCCTTCCATGGCCAGGTCCAGCTaGTTCCATCGGTCCTTGAAG +
Preference number: 4 (lower is better)
Translates to: RSQTPLHGGALGLWLGPSMARSS*FHRSLK
Trigger: CTTCAAGGACCGATGGAACCAGCTGGACCTGGCCAT...GGAAGGACCCAACCAAAGGCCGAGGGCACCACCGTGCAAGGGGGTTTGGGAACG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR CCA 90 bp CTTGTCCTGGCCAGTGGATCACAGCTTCCCTGGTTCTCATCTCTGTCACCCACACCAGGGCCCAGGCCATaGGCCATCTCCAGCTCGAGC +
Preference number: 4 (lower is better)
Translates to: LVLASGSQLPWFSSLSPTPGPRP*AISSSS
Trigger: GCTCGAGCTGGAGATGGCCCATGGCCTGGGCCCTGG...TGTGGGTGACAGAGATGAGAACCAGGGAAGCTGTGATCCACTGGCCAGGACAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp AGGGAGTTTGTGTCCTGCCCGCCAGAGCACACAGCCTGGTGTGACGGGTCAGACCGTCACCCAGCAGGATaGACGAGGACCTGTCTGAGT +
Preference number: 4 (lower is better)
Translates to: REFVSCPPEHTAWCDGSDRHPAG*TRTCLS
Trigger: ACTCAGACAGGTCCTCGTCCATCCTGCTGGGTGACG...GTCTGACCCGTCACACCAGGCTGTGTGCTCTGGCGGGCAGGACACAAACTCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR CCA 90 bp AGTACAGCATCTGCAAACTCGTGGCCCCTGCAGCCTCTCCAGATCACTGCCACCGGTCTCCCACACGCATaGGCTCAGGTGGGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: STASANSWPLQPLQITATGLPHA*AQVGPA
Trigger: AGCTGGACCCACCTGAGCCCATGCGTGTGGGAGACC...GGTGGCAGTGATCTGGAGAGGCTGCAGGGGCCACGAGTTTGCAGATGCTGTACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp CGGGTCAGACAGTCACCCAGTGAATCAACTGCACTCACTGTGGGAGCCGGCCCGACACAGGAAGTTCTCTaGATCCGGCGAGACGGCCGT +
Preference number: 4 (lower is better)
Translates to: RVRQSPSESTALTVGAGPTQEVL*IRRDGR
Trigger: ACGGCCGTCTCGCCGGATCCAGAGAACTTCCTGTGT...CGGGCCGGCTCCCACAGTGAGTGCAGTTGATTCACTGGGTGACTGTCTGACCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR CCA 90 bp AGTCACCCAGTGAATCAACTGCACTCACTGTGGGAGCCGGCCCGGCCCCATTTCGTGGAAGAACTCGGCTaGCATGGGCAGGAGAGGGCT +
Preference number: 4 (lower is better)
Translates to: SHPVNQLHSLWEPARPHFVEELG*HGQERA
Trigger: AGCCCTCTCCTGCCCATGCCAGCCGAGTTCTTCCAC...GAAATGGGGCCGGGCCGGCTCCCACAGTGAGTGCAGTTGATTCACTGGGTGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR CCA 90 bp CTGAATTGCACCTCTTCTCCAGGGCCTGGTGCCCTCAGAGGCCTGAGGGTCCTCGCAGACACTGCAGGGTaGAAGAACTCGGCTGGCATG +
Preference number: 4 (lower is better)
Translates to: LNCTSSPGPGALRGLRVLADTAG*KNSAGM
Trigger: CATGCCAGCCGAGTTCTTCCACCCTGCAGTGTCTGC...GAGGACCCTCAGGCCTCTGAGGGCACCAGGCCCTGGAGAAGAGGTGCAATTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp AGGGAGTTTGTGTCCTGCCCGCCAGAGCACACAGCCTGGTGTGACGGGTCAGACGCCAGTGCCCTTTTCTaGGCCTTTCTGGCTGGCAGA +
Preference number: 4 (lower is better)
Translates to: REFVSCPPEHTAWCDGSDASALF*AFLAGR
Trigger: TCTGCCAGCCAGAAAGGCCCAGAAAAGGGCACTGGC...GTCTGACCCGTCACACCAGGCTGTGTGCTCTGGCGGGCAGGACACAAACTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR CCA 90 bp TTGCAAAAAGTCAAGTCTGTCTGCTTCCCTCCAACTGCGAGAGCTCAGGGTCAGGGGTGCAGCCCGGGCTaGTGGAGCCCCCGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: LQKVKSVCFPPTARAQGQGCSPG*WSPRCC
Trigger: ACAGCAGCGGGGGCTCCACCAGCCCGGGCTGCACCC...CTGACCCTGAGCTCTCGCAGTTGGAGGGAAGCAGACAGACTTGACTTTTTGCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp TGTCCTGGCCAGTGGATCACAGCTTCCCTGGTTCTCATCTCTGTCACCCACAGGTCCATGGAGTCGTGGTaGGTGCAGCCCGGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: CPGQWITASLVLISVTHRSMESW*VQPGLV
Trigger: CACCAGCCCGGGCTGCACCCACCACGACTCCATGGA...CCTGTGGGTGACAGAGATGAGAACCAGGGAAGCTGTGATCCACTGGCCAGGACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp GGCCAGAATCCCAGAGCATCAGACAAAAGCCCCGTCCAGGCCCTGGCCCACCTCGCGCGATCCCAGGTGTaGACGAAGTATTGCTGTCTG +
Preference number: 4 (lower is better)
Translates to: GQNPRASDKSPVQALAHLARSQV*TKYCCL
Trigger: CAGACAGCAATACTTCGTCCACACCTGGGATCGCGC...GAGGTGGGCCAGGGCCTGGACGGGGCTTTTGTCTGATGCTCTGGGATTCTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp CTGCCTCGAGGTGTCTGCTTGCAGAGTCACACGGTTCAGGGTAAGGGGAGGTTTTGGGCCACGCAGGCCTaGCTAACCCAGACTCCGCTC +
Preference number: 4 (lower is better)
Translates to: LPRGVCLQSHTVQGKGRFWATQA*LTQTPL
Trigger: GAGCGGAGTCTGGGTTAGCCAGGCCTGCGTGGCCCA...AAACCTCCCCTTACCCTGAACCGTGTGACTCTGCAAGCAGACACCTCGAGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp GGCCGTCTCTGCACAGATGCCAAGGTGCCTGCCCACCACCGCTCTACGGAGCCCGGGATGTGTGTGCTCTaGGGTGTCTACGAAAGACTT +
Preference number: 4 (lower is better)
Translates to: GRLCTDAKVPAHHRSTEPGMCVL*GVYERL
Trigger: AAGTCTTTCGTAGACACCCCAGAGCACACACATCCC...GGGCTCCGTAGAGCGGTGGTGGGCAGGCACCTTGGCATCTGTGCAGAGACGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp CCACCCCTGCCTAGAATTCGGTCAGAGCTGCTTTGCCTTGAACCTACTGGGGCGACAGGGGCTGGCAGGTaGGGTGGGAAGATGTGGCCT +
Preference number: 4 (lower is better)
Translates to: PPLPRIRSELLCLEPTGATGAGR*GGKMWP
Trigger: AGGCCACATCTTCCCACCCCACCTGCCAGCCCCTGT...CGCCCCAGTAGGTTCAAGGCAAAGCAGCTCTGACCGAATTCTAGGCAGGGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp GGCCAGAATCCCAGAGCATCAGACAAAAGCCCCGTCCAGGCCCTGGCCCACCTCACACAGCCCCTCTTCTaGGCTCCAATACACGTGTCC +
Preference number: 4 (lower is better)
Translates to: GQNPRASDKSPVQALAHLTQPLF*APIHVS
Trigger: GGACACGTGTATTGGAGCCCAGAAGAGGGGCTGTGT...GAGGTGGGCCAGGGCCTGGACGGGGCTTTTGTCTGATGCTCTGGGATTCTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp GAATTCGGTCAGAGCTGCTTTGCCTTGAACCTACTGGGGCGGGGGCATAGTTGCTCTACACCCGGGCCATaGGCCAGCAGGTACCAGCGC +
Preference number: 4 (lower is better)
Translates to: EFGQSCFALNLLGRGHSCSTPGP*ASRYQR
Trigger: GCGCTGGTACCTGCTGGCCCATGGCCCGGGTGTAGA...GCAACTATGCCCCCGCCCCAGTAGGTTCAAGGCAAAGCAGCTCTGACCGAATTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp CTGCCTCGAGGTGTCTGCTTGCAGAGTCACACGGTTCAGGGTAAGGGGAGGTTTTCTACACCCGGGCCATaGGCCAGCAGGTACCAGCGC +
Preference number: 4 (lower is better)
Translates to: LPRGVCLQSHTVQGKGRFSTPGP*ASRYQR
Trigger: GCGCTGGTACCTGCTGGCCCATGGCCCGGGTGTAGA...AAACCTCCCCTTACCCTGAACCGTGTGACTCTGCAAGCAGACACCTCGAGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp GCCCCTCCAAGCAAGCCACTGCCGGCTCAGTCTCCCGCACCCTTCCTCTGCAGGAAACAACACTGGTGGTaGCTGCCGCTTGGTTTCTCT +
Preference number: 4 (lower is better)
Translates to: APPSKPLPAQSPAPFLCRKQHWW*LPLGFS
Trigger: AGAGAAACCAAGCGGCAGCCACCACCAGTGTTGTTT...CCTGCAGAGGAAGGGTGCGGGAGACTGAGCCGGCAGTGGCTTGCTTGGAGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp GGCCGTCTCTGCACAGATGCCAAGGTGCCTGCCCACCACCGCTCTACGGAGCCCTCAAAACAACACTGGTaGTGGCTGCCGCTTGGTTTC +
Preference number: 4 (lower is better)
Translates to: GRLCTDAKVPAHHRSTEPSKQHW*WLPLGF
Trigger: GAAACCAAGCGGCAGCCACCACCAGTGTTGTTTTGA...GGGCTCCGTAGAGCGGTGGTGGGCAGGCACCTTGGCATCTGTGCAGAGACGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp CCTCCCACCTCCATTCCTAGTAATCAAGCCCCCACTCACACCCACCCAGAGCACCAGTGCTCTAGGGCCTaGGAGGTGTCGGTACCTGCC +
Preference number: 4 (lower is better)
Translates to: PPTSIPSNQAPTHTHPEHQCSRA*EVSVPA
Trigger: GGCAGGTACCGACACCTCCCAGGCCCTAGAGCACTG...GTGCTCTGGGTGGGTGTGAGTGGGGGCTTGATTACTAGGAATGGAGGTGGGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000401624.5
3UTR CAA 72 bp CCAAGCCCTTACACAACGCAGCAAACGGGGCTGGGGTaGGCCCTGGAAGCGGAAGGCTCTGAGCTGAGGATT +
Preference number: 4 (lower is better)
Translates to: PSPYTTQQTGLG*ALEAEGSELRI
Trigger: AATCCTCAGCTCAGAGCCTTCCGCTTCCAGGGCCAACCCCAGCCCCGTTTGCTGCGTTGTGTAAGGGCTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR TCA 90 bp GGATCACAGGCCTCTTCCAGACCCGCCTTGGGGTCCTCCCCACACTCTGCTGTCGACAGGTTGATGTTCTaGAGGTCCAGGGAGTACTCG +
Preference number: 4 (lower is better)
Translates to: GSQASSRPALGSSPHSAVDRLMF*RSREYS
Trigger: CGAGTACTCCCTGGACCTTCAGAACATCAACCTGTC...GACAGCAGAGTGTGGGGAGGACCCCAAGGCGGGTCTGGAAGAGGCCTGTGATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR TCA 90 bp CTCTCCTCCCCTCCCCTCAAGCTAGGGATCACAGGCCTCTTCCAGACCCGCCTTCCGACAGGGAGCAGATaGAGGGCATCTCATCATCCT +
Preference number: 4 (lower is better)
Translates to: LSSPPLKLGITGLFQTRLPTGSR*RASHHP
Trigger: AGGATGATGAGATGCCCTTCATCTGCTCCCTGTCGG...AAGGCGGGTCTGGAAGAGGCCTGTGATCCCTAGCTTGAGGGGAGGGGAGGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR TCA 90 bp CAGCACAGTGTCCAGGAACAGCCACAGCTCAGCGCCCATATGGGGGATAAAAGGCTCCTTCCCCAGTTCTaGGGAGGCTCCGTCCTCGCT +
Preference number: 4 (lower is better)
Translates to: QHSVQEQPQLSAHMGDKRLLPQF*GGSVLA
Trigger: AGCGAGGACGGAGCCTCCTCAGAACTGGGGAAGGAG...CCTTTTATCCCCCATATGGGCGCTGAGCTGTGGCTGTTCCTGGACACTGTGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR TCA 90 bp GCCATGGGCCAGCAGGTACCAGCGCCATCAGCAACTAGGAGGGAAGTTCATTCAGCCGCAGGGCAGGCATaGAGCGCACCAGTTTCAGCA +
Preference number: 4 (lower is better)
Translates to: AMGQQVPAPSATRREVHSAAGQA*SAPVSA
Trigger: TGCTGAAACTGGTGCGCTTCATGCCTGCCCTGCGGC...TGAATGAACTTCCCTCCTAGTTGCTGATGGCGCTGGTACCTGCTGGCCCATGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR TCA 90 bp CTCCAGTCTCAGCGTCACCCCAGCGTTCCCAAACCCCCTTGCACGGTGGTGCCCTGTCCGTGCGGAGGCTaGACTTGCAGCCAAAAATAT +
Preference number: 4 (lower is better)
Translates to: LQSQRHPSVPKPPCTVVPCPCGG*TCSQKY
Trigger: ATATTTTTGGCTGCAAGTTCAGCCTCCGCACGGACA...GGGCACCACCGTGCAAGGGGGTTTGGGAACGCTGGGGTGACGCTGAGACTGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR TCA 90 bp TCACCCAGTGAATCAACTGCACTCACTGTGGGAGCCGGCCCGGCCCCATTTCCCTCCTCCCTAGAGACATaGCACTGCTCTTTCGGGAGC +
Preference number: 4 (lower is better)
Translates to: SPSESTALTVGAGPAPFPSSLET*HCSFGS
Trigger: GCTCCCGAAAGAGCAGTGTCATGTCTCTAGGGAGGA...GGGAAATGGGGCCGGGCCGGCTCCCACAGTGAGTGCAGTTGATTCACTGGGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR TCA 90 bp GTGTCCTGCCCGCCAGAGCACACAGCCTGGTGTGACGGGTCAGACAGTCACCCATGTAGTTGGACACGGTaGGAAAGATGCGTTCGGTGC +
Preference number: 4 (lower is better)
Translates to: VSCPPEHTAWCDGSDSHPCSWTR*ERCVRC
Trigger: GCACCGAACGCATCTTTCTCACCGTGTCCAACTACA...TGGGTGACTGTCTGACCCGTCACACCAGGCTGTGTGCTCTGGCGGGCAGGACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR TCA 90 bp CGGGTCAGACAGTCACCCAGTGAATCAACTGCACTCACTGTGGGAGCCGGCCCGGGTAGAACTTGCCCTTaGAGAGCTGCACTCCCAGGA +
Preference number: 4 (lower is better)
Translates to: RVRQSPSESTALTVGAGPGRTCP*RAALPG
Trigger: TCCTGGGAGTGCAGCTCTTCAAGGGCAAGTTCTACC...CGGGCCGGCTCCCACAGTGAGTGCAGTTGATTCACTGGGTGACTGTCTGACCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR TCA 90 bp GAATTCGGTCAGAGCTGCTTTGCCTTGAACCTACTGGGGCGGGGGCATAGTTGCAGTCCGAGCGGTTGGTaGTGTTGCGGGTGTCCACGC +
Preference number: 4 (lower is better)
Translates to: EFGQSCFALNLLGRGHSCSPSGW*CCGCPR
Trigger: GCGTGGACACCCGCAACATCACCAACCGCTCGGACT...GCAACTATGCCCCCGCCCCAGTAGGTTCAAGGCAAAGCAGCTCTGACCGAATTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR TCA 90 bp AGGGAGTTTGTGTCCTGCCCGCCAGAGCACACAGCCTGGTGTGACGGGTCAGACTCTTGCTTGTCGTGGTaGCACTTCTTGCAGCCGGCA +
Preference number: 4 (lower is better)
Translates to: REFVSCPPEHTAWCDGSDSCLSW*HFLQPA
Trigger: TGCCGGCTGCAAGAAGTGTCACCACGACAAGCAAGA...GTCTGACCCGTCACACCAGGCTGTGTGCTCTGGCGGGCAGGACACAAACTCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR TCA 90 bp AGGGAGTTTGTGTCCTGCCCGCCAGAGCACACAGCCTGGTGTGACGGGTCAGACAGGACCGGACAGGGTTaGATGGGATCTCCTCCATCT +
Preference number: 4 (lower is better)
Translates to: REFVSCPPEHTAWCDGSDRTGQG*MGSPPS
Trigger: AGATGGAGGAGATCCCATTCAACCCTGTCCGGTCCT...GTCTGACCCGTCACACCAGGCTGTGTGCTCTGGCGGGCAGGACACAAACTCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR TCA 90 bp GGTCAGAGCTGCTTTGCCTTGAACCTACTGGGGCGGGGGCATAGTTGCTCAGGAGGAGGAGGGTACAGTTaGCCCTTGGTGACCGCAGAG +
Preference number: 4 (lower is better)
Translates to: GQSCFALNLLGRGHSCSGGGGYS*PLVTAE
Trigger: CTCTGCGGTCACCAAGGGTCAACTGTACCCTCCTCC...TCCTGAGCAACTATGCCCCCGCCCCAGTAGGTTCAAGGCAAAGCAGCTCTGACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR TCA 90 bp CAGCACAGTGTCCAGGAACAGCCACAGCTCAGCGCCCATATGGGGGATAAAAGGGTGCCCTCAGAGGCCTaGGGGTCCTCTCCAAGCTAC +
Preference number: 4 (lower is better)
Translates to: QHSVQEQPQLSAHMGDKRVPSEA*GSSPSY
Trigger: GTAGCTTGGAGAGGACCCTCAGGCCTCTGAGGGCAC...CCTTTTATCCCCCATATGGGCGCTGAGCTGTGGCTGTTCCTGGACACTGTGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR TCA 90 bp GCACAGATGCCAAGGTGCCTGCCCACCACCGCTCTACGGAGCCCAGCAGACAGCAACACACACACACCCTaGATTGCACCTCTTCTCCAG +
Preference number: 4 (lower is better)
Translates to: AQMPRCLPTTALRSPADSNTHTP*IAPLLQ
Trigger: CTGGAGAAGAGGTGCAATTCAGGGTGTGTGTGTGTT...GCTGTCTGCTGGGCTCCGTAGAGCGGTGGTGGGCAGGCACCTTGGCATCTGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp CCTAGTAATCAAGCCCCCACTCACACCCACCCAGAGCACCCAGGGTGTCCTCCCCGCACGGCTGGTACATaGCAAGTGTCACGCAGTTCA +
Preference number: 4 (lower is better)
Translates to: PSNQAPTHTHPEHPGCPPRTAGT*QVSRSS
Trigger: TGAACTGCGTGACACTTGGCATGTACCAGCCGTGCG...GGGAGGACACCCTGGGTGCTCTGGGTGGGTGTGAGTGGGGGCTTGATTACTAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR GCA 90 bp GCAGGGAGTTTGTGTCCTGCCCGCCAGAGCACACAGCCTGGTGTGACGGGTCAGCGAGGTAGCACTTCTTaGCAAAAATCCCCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: AGSLCPARQSTQPGVTGQRGSTS*QKSPGP
Trigger: TGGCCCTGGGGATTTTTGGCAAGAAGTGCTACCTCG...CTGACCCGTCACACCAGGCTGTGTGCTCTGGCGGGCAGGACACAAACTCCCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR GCA 90 bp GCCATGGGCCAGCAGGTACCAGCGCCATCAGCAACTAGGAGGGAAGTTCATTCACGTAGCTGGCCACCGTaGTGGAGGACAGGTAGCGCT +
Preference number: 4 (lower is better)
Translates to: AMGQQVPAPSATRREVHSRSWPP*WRTGSA
Trigger: AGCGCTACCTGTCCTCCAGCACGGTGGCCAGCTACG...TGAATGAACTTCCCTCCTAGTTGCTGATGGCGCTGGTACCTGCTGGCCCATGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp GGTCAGAGCTGCTTTGCCTTGAACCTACTGGGGCGGGGGCATAGTTGCTCAGGAGCTTGGGATCTCCGCTaGTGTCCAGGCCTTCCTGGA +
Preference number: 4 (lower is better)
Translates to: GQSCFALNLLGRGHSCSGAWDLR*CPGLPG
Trigger: TCCAGGAAGGCCTGGACAGCAGCGGAGATCCCAAGC...TCCTGAGCAACTATGCCCCCGCCCCAGTAGGTTCAAGGCAAAGCAGCTCTGACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp CTGCCTCGAGGTGTCTGCTTGCAGAGTCACACGGTTCAGGGTAAGGGGAGGTTTCCAGCAGGACCTAGGTaGCCACCCAGTGGGAGACTG +
Preference number: 4 (lower is better)
Translates to: LPRGVCLQSHTVQGKGRFPAGPR*PPSGRL
Trigger: CAGTCTCCCACTGGGTGGGCACCTAGGTCCTGCTGG...AAACCTCCCCTTACCCTGAACCGTGTGACTCTGCAAGCAGACACCTCGAGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp CAGCACAGTGTCCAGGAACAGCCACAGCTCAGCGCCCATATGGGGGATAAAAGGGCCGACGGCGGCTTGTaGTTGAGGCTGTTCCAGCTG +
Preference number: 4 (lower is better)
Translates to: QHSVQEQPQLSAHMGDKRADGGL*LRLFQL
Trigger: CAGCTGGAACAGCCTCAAGCACAAGCCGCCGTCGGC...CCTTTTATCCCCCATATGGGCGCTGAGCTGTGGCTGTTCCTGGACACTGTGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp GAATTCGGTCAGAGCTGCTTTGCCTTGAACCTACTGGGGCGGGGGCATAGTTGCTGGGCATCCTGCCATTaGAGTCCTCATGCCCGGGGG +
Preference number: 4 (lower is better)
Translates to: EFGQSCFALNLLGRGHSCWASCH*SPHARG
Trigger: CCCCCGGGCATGAGGACTGCAATGGCAGGATGCCCA...GCAACTATGCCCCCGCCCCAGTAGGTTCAAGGCAAAGCAGCTCTGACCGAATTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp GGGGACAGCACAGTGTCCAGGAACAGCCACAGCTCAGCGCCCATATGGGGGATACGATGCTGGGCATCCTaGCATTGCAGTCCTCATGCC +
Preference number: 4 (lower is better)
Translates to: GDSTVSRNSHSSAPIWGIRCWAS*HCSPHA
Trigger: GGCATGAGGACTGCAATGGCAGGATGCCCAGCATCG...TATCCCCCATATGGGCGCTGAGCTGTGGCTGTTCCTGGACACTGTGCTGTCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp CGGGTCAGACAGTCACCCAGTGAATCAACTGCACTCACTGTGGGAGCCGGCCCGAGACGTCTTTGGCGATaGTGGGCATCCTGCCATTGC +
Preference number: 4 (lower is better)
Translates to: RVRQSPSESTALTVGAGPRRLWR*WASCHC
Trigger: GCAATGGCAGGATGCCCAGCATCGCCAAAGACGTCT...CGGGCCGGCTCCCACAGTGAGTGCAGTTGATTCACTGGGTGACTGTCTGACCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR GCA 90 bp TGGACCCTGGAGCCTTCGCTCATGCCCATCCCTTTGCCTAGAACACCTGCCTCGAGACGTCGATCATCTTaGGGACGCGGAAGCACAGGG +
Preference number: 4 (lower is better)
Translates to: WTLEPSLMPIPLPRTPASRRRSS*GRGSTG
Trigger: CCCTGTGCTTCCGCGTCCGCAAGATGATCGACGTCT...CGAGGCAGGTGTTCTAGGCAAAGGGATGGGCATGAGCGAAGGCTCCAGGGTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp GCCATGGGCCAGCAGGTACCAGCGCCATCAGCAACTAGGAGGGAAGTTCATTCAAGATGCGTTCGGTGCTaGCGGCCTCGATCTGAGGCC +
Preference number: 4 (lower is better)
Translates to: AMGQQVPAPSATRREVHSRCVRC*RPRSEA
Trigger: GGCCTCAGATCGAGGCCGGCAGCACCGAACGCATCT...TGAATGAACTTCCCTCCTAGTTGCTGATGGCGCTGGTACCTGCTGGCCCATGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp GTGTCCTGCCCGCCAGAGCACACAGCCTGGTGTGACGGGTCAGACAGTCACCCATTGCCCTTGAAGAGCTaGACTCCCAGGATGCCAAAG +
Preference number: 4 (lower is better)
Translates to: VSCPPEHTAWCDGSDSHPLPLKS*TPRMPK
Trigger: CTTTGGCATCCTGGGAGTGCAGCTCTTCAAGGGCAA...TGGGTGACTGTCTGACCCGTCACACCAGGCTGTGTGCTCTGGCGGGCAGGACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR GCA 90 bp CAGCACAGTGTCCAGGAACAGCCACAGCTCAGCGCCCATATGGGGGATAAAAGGTGGCATGCCGGCTCATaGCCTCGCACGGGTTCTCGT +
Preference number: 4 (lower is better)
Translates to: QHSVQEQPQLSAHMGDKRWHAGS*PRTGSR
Trigger: ACGAGAACCCGTGCGAGGGCATGAGCCGGCATGCCA...CCTTTTATCCCCCATATGGGCGCTGAGCTGTGGCTGTTCCTGGACACTGTGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp AGTACAGCATCTGCAAACTCGTGGCCCCTGCAGCCTCTCCAGATCACTGCCACCAGCGGCGACACAAACTaGAGGCTGCTCAGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: STASANSWPLQPLQITATSGDTN*RLLRQL
Trigger: CAGCTGCCTGAGCAGCCTGCAGTTTGTGTCGCCGCT...GGTGGCAGTGATCTGGAGAGGCTGCAGGGGCCACGAGTTTGCAGATGCTGTACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp CCACCCCTGCCTAGAATTCGGTCAGAGCTGCTTTGCCTTGAACCTACTGGGGCGTGGGGAGGGTTCCAGTaGCAGTGCCCTTTTCTGGGC +
Preference number: 4 (lower is better)
Translates to: PPLPRIRSELLCLEPTGAWGGFQ*QCPFLG
Trigger: GCCCAGAAAAGGGCACTGGCACTGGAACCCTCCCCA...CGCCCCAGTAGGTTCAAGGCAAAGCAGCTCTGACCGAATTCTAGGCAGGGGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp GCCATGGGCCAGCAGGTACCAGCGCCATCAGCAACTAGGAGGGAAGTTCATTCAGATGCCCAGGAGCCCTaGAGCGCAATCTTGGGGAGG +
Preference number: 4 (lower is better)
Translates to: AMGQQVPAPSATRREVHSDAQEP*SAILGR
Trigger: CCTCCCCAAGATTGCGCTGCAGGGCTCCTGGGCATC...TGAATGAACTTCCCTCCTAGTTGCTGATGGCGCTGGTACCTGCTGGCCCATGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp CTGCCTCGAGGTGTCTGCTTGCAGAGTCACACGGTTCAGGGTAAGGGGAGGTTTCCACCCCCTCAGAAGTaGTCAGGAGCTGGGGACCTC +
Preference number: 4 (lower is better)
Translates to: LPRGVCLQSHTVQGKGRFPPPQK*SGAGDL
Trigger: GAGGTCCCCAGCTCCTGAGCACTTCTGAGGGGGTGG...AAACCTCCCCTTACCCTGAACCGTGTGACTCTGCAAGCAGACACCTCGAGGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp TGTCCTGGCCAGTGGATCACAGCTTCCCTGGTTCTCATCTCTGTCACCCACAGGCCTTCCTCTGCAGGCTaGCTCCACTCCTGCTCCACC +
Preference number: 4 (lower is better)
Translates to: CPGQWITASLVLISVTHRPSSAG*LHSCST
Trigger: GGTGGAGCAGGAGTGGAGGCAGCCTGCAGAGGAAGG...CCTGTGGGTGACAGAGATGAGAACCAGGGAAGCTGTGATCCACTGGCCAGGACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp CTTGTCCTGGCCAGTGGATCACAGCTTCCCTGGTTCTCATCTCTGTCACCCACAGGGCGGGGGCATAGTTaGTCAGGACGGGGACAGCAC +
Preference number: 4 (lower is better)
Translates to: LVLASGSQLPWFSSLSPTGRGHS*SGRGQH
Trigger: GTGCTGTCCCCGTCCTGAGCAACTATGCCCCCGCCC...TGTGGGTGACAGAGATGAGAACCAGGGAAGCTGTGATCCACTGGCCAGGACAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp GGGGACAGCACAGTGTCCAGGAACAGCCACAGCTCAGCGCCCATATGGGGGATAAGGAGCAGTCAAGCCTaGCCAGCTCCACTTCTTCCC +
Preference number: 4 (lower is better)
Translates to: GDSTVSRNSHSSAPIWGIRSSQA*PAPLLP
Trigger: GGGAAGAAGTGGAGCTGGGCAGGCTTGACTGCTCCT...TATCCCCCATATGGGCGCTGAGCTGTGGCTGTTCCTGGACACTGTGCTGTCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp GGCCAGAATCCCAGAGCATCAGACAAAAGCCCCGTCCAGGCCCTGGCCCACCTCTCATGCCCATCCCTTTaGCTAGAACACCTGCCTCGA +
Preference number: 4 (lower is better)
Translates to: GQNPRASDKSPVQALAHLSCPSL*LEHLPR
Trigger: TCGAGGCAGGTGTTCTAGGCAAAGGGATGGGCATGA...GAGGTGGGCCAGGGCCTGGACGGGGCTTTTGTCTGATGCTCTGGGATTCTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp GGCCAGAATCCCAGAGCATCAGACAAAAGCCCCGTCCAGGCCCTGGCCCACCTCTGGAGCCTTCGCTCATaGCCATCCCTTTGCCTAGAA +
Preference number: 4 (lower is better)
Translates to: GQNPRASDKSPVQALAHLWSLRS*PSLCLE
Trigger: TTCTAGGCAAAGGGATGGGCATGAGCGAAGGCTCCA...GAGGTGGGCCAGGGCCTGGACGGGGCTTTTGTCTGATGCTCTGGGATTCTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp GTGTCCTGCCCGCCAGAGCACACAGCCTGGTGTGACGGGTCAGACAGTCACCCATGCAAAGTCTGGCAATaGCGGCTTCCGAGATGTCTC +
Preference number: 4 (lower is better)
Translates to: VSCPPEHTAWCDGSDSHPCKVWQ*RLPRCL
Trigger: GAGACATCTCGGAAGCCGGCATTGCCAGACTTTGCA...TGGGTGACTGTCTGACCCGTCACACCAGGCTGTGTGCTCTGGCGGGCAGGACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR CCA 90 bp CCTCCCACCTCCATTCCTAGTAATCAAGCCCCCACTCACACCCACCCAGAGCACCGCCAGGTCTGGGTGTaGGACATGAGGATCAGCTCC +
Preference number: 4 (lower is better)
Translates to: PPTSIPSNQAPTHTHPEHRQVWV*DMRISS
Trigger: GGAGCTGATCCTCATGTCCCACACCCAGACCTGGCG...GTGCTCTGGGTGGGTGTGAGTGGGGGCTTGATTACTAGGAATGGAGGTGGGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR CCA 90 bp TCACCCAGTGAATCAACTGCACTCACTGTGGGAGCCGGCCCGGCCCCATTTCCCAATAGGCGCCAGGTCTaGGTGTGGGACATGAGGATC +
Preference number: 4 (lower is better)
Translates to: SPSESTALTVGAGPAPFPNRRQV*VWDMRI
Trigger: GATCCTCATGTCCCACACCCAGACCTGGCGCCTATT...GGGAAATGGGGCCGGGCCGGCTCCCACAGTGAGTGCAGTTGATTCACTGGGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR CCA 90 bp GAGTTTGTGTCCTGCCCGCCAGAGCACACAGCCTGGTGTGACGGGTCAGACAGTGGACATTCCCCAGCATaGGCAGTGTGTCCAGGAGCA +
Preference number: 4 (lower is better)
Translates to: EFVSCPPEHTAWCDGSDSGHSPA*AVCPGA
Trigger: TGCTCCTGGACACACTGCCCATGCTGGGGAATGTCC...ACTGTCTGACCCGTCACACCAGGCTGTGTGCTCTGGCGGGCAGGACACAAACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR CCA 90 bp TGTCCTGGCCAGTGGATCACAGCTTCCCTGGTTCTCATCTCTGTCACCCACAGGCTCCGGCTGGTAGTATaGGGGCAAGGCCACATCCCC +
Preference number: 4 (lower is better)
Translates to: CPGQWITASLVLISVTHRLRLVV*GQGHIP
Trigger: GGGGATGTGGCCTTGCCCCCATACTACCAGCCGGAG...CCTGTGGGTGACAGAGATGAGAACCAGGGAAGCTGTGATCCACTGGCCAGGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp CCACCCCTGCCTAGAATTCGGTCAGAGCTGCTTTGCCTTGAACCTACTGGGGCGCGTAGACGTCGTCCTTaGACAGGCAGCACTCACGGC +
Preference number: 4 (lower is better)
Translates to: PPLPRIRSELLCLEPTGARRRRP*TGSTHG
Trigger: GCCGTGAGTGCTGCCTGTCCAAGGACGACGTCTACG...CGCCCCAGTAGGTTCAAGGCAAAGCAGCTCTGACCGAATTCTAGGCAGGGGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp CTGAAGCCCTCGGAGGGGGTCTTAGCAAAGGCAAGGTTATTGCTGAAGTACAGCCGATGCCGCGCAGCTTaGCTCGCGTCTCCCGCCACA +
Preference number: 4 (lower is better)
Translates to: LKPSEGVLAKARLLLKYSRCRAA*LASPAT
Trigger: TGTGGCGGGAGACGCGAGCCAAGCTGCGCGGCATCG...GCTGTACTTCAGCAATAACCTTGCCTTTGCTAAGACCCCCTCCGAGGGCTTCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp TGTCCTGGCCAGTGGATCACAGCTTCCCTGGTTCTCATCTCTGTCACCCACAGGCCGAGTAGGAGCGATTaGCGTCACCCTCCGCCTGGA +
Preference number: 4 (lower is better)
Translates to: CPGQWITASLVLISVTHRPSRSD*RHPPPG
Trigger: TCCAGGCGGAGGGTGACGCCAATCGCTCCTACTCGG...CCTGTGGGTGACAGAGATGAGAACCAGGGAAGCTGTGATCCACTGGCCAGGACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp AGTACAGCATCTGCAAACTCGTGGCCCCTGCAGCCTCTCCAGATCACTGCCACCGCCCATTGGGGGTCATaGGGATTGGGCAGAGCTTGG +
Preference number: 4 (lower is better)
Translates to: STASANSWPLQPLQITATAHWGS*GLGRAW
Trigger: CCAAGCTCTGCCCAATCCCCATGACCCCCAATGGGC...GGTGGCAGTGATCTGGAGAGGCTGCAGGGGCCACGAGTTTGCAGATGCTGTACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp AAAGTCAAGTCTGTCTGCTTCCCTCCAACTGCGAGAGCTCAGGGTCAGCCAGGAGGACCCAGCGGTAGTTaGCGGCCATGCAGTCCGAGC +
Preference number: 4 (lower is better)
Translates to: KVKSVCFPPTARAQGQPGGPSGS*RPCSPS
Trigger: GCTCGGACTGCATGGCCGCCAACTACCGCTGGGTCC...TCCTGGCTGACCCTGAGCTCTCGCAGTTGGAGGGAAGCAGACAGACTTGACTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp CGGGTCAGACAGTCACCCAGTGAATCAACTGCACTCACTGTGGGAGCCGGCCCGGGGTGTGACAATAGGTaGCATAGTAGGGCAGCCGCT +
Preference number: 4 (lower is better)
Translates to: RVRQSPSESTALTVGAGPGCDNR*HSRAAA
Trigger: AGCGGCTGCCCTACTATGCCACCTATTGTCACACCC...CGGGCCGGCTCCCACAGTGAGTGCAGTTGATTCACTGGGTGACTGTCTGACCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR CCA 90 bp AGTTTGTGTCCTGCCCGCCAGAGCACACAGCCTGGTGTGACGGGTCAGACAGTCCGAAGTTCTCGAAGGTaGCATGCCGGCTCATGCCCT +
Preference number: 4 (lower is better)
Translates to: SLCPARQSTQPGVTGQTVRSSRR*HAGSCP
Trigger: AGGGCATGAGCCGGCATGCCACCTTCGAGAACTTCG...GACTGTCTGACCCGTCACACCAGGCTGTGTGCTCTGGCGGGCAGGACACAAACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR CCA 90 bp CCAGTGAATCAACTGCACTCACTGTGGGAGCCGGCCCGGCCCCATTTCCCCACCAGTAGTGGTGGAAGATaGAGCCCGACAGGTTGTCGA +
Preference number: 4 (lower is better)
Translates to: PVNQLHSLWEPARPHFPTSSGGR*SPTGCR
Trigger: TCGACAACCTGTCGGGCTCCATCTTCCACCACTACT...GGTGGGGAAATGGGGCCGGGCCGGCTCCCACAGTGAGTGCAGTTGATTCACTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR CCA 90 bp GGCCAGAATCCCAGAGCATCAGACAAAAGCCCCGTCCAGGCCCTGGCCCACCTCAGTAGTGGTGGAAGATaGAGCCCGACAGGTTGTCGA +
Preference number: 4 (lower is better)
Translates to: GQNPRASDKSPVQALAHLSSGGR*SPTGCR
Trigger: TCGACAACCTGTCGGGCTCCATCTTCCACCACTACT...GAGGTGGGCCAGGGCCTGGACGGGGCTTTTGTCTGATGCTCTGGGATTCTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp GAATTCGGTCAGAGCTGCTTTGCCTTGAACCTACTGGGGCGGGGGCATAGTTGCCAGGTGGGCAGGCTGTaGGGTCCTCGAGACTCAGGT +
Preference number: 4 (lower is better)
Translates to: EFGQSCFALNLLGRGHSCQVGRL*GPRDSG
Trigger: ACCTGAGTCTCGAGGACCCCACAGCCTGCCCACCTG...GCAACTATGCCCCCGCCCCAGTAGGTTCAAGGCAAAGCAGCTCTGACCGAATTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp GCAGGGAGTTTGTGTCCTGCCCGCCAGAGCACACAGCCTGGTGTGACGGGTCAGCCGGACAGGGTTGAATaGGATCTCCTCCATCTCACA +
Preference number: 4 (lower is better)
Translates to: AGSLCPARQSTQPGVTGQPDRVE*DLLHLT
Trigger: TGTGAGATGGAGGAGATCCCATTCAACCCTGTCCGG...CTGACCCGTCACACCAGGCTGTGTGCTCTGGCGGGCAGGACACAAACTCCCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR CCA 90 bp CCACCCCTGCCTAGAATTCGGTCAGAGCTGCTTTGCCTTGAACCTACTGGGGCGGTGGAAGAACTCGGCTaGCATGGGCAGGAGAGGGCT +
Preference number: 4 (lower is better)
Translates to: PPLPRIRSELLCLEPTGAVEELG*HGQERA
Trigger: AGCCCTCTCCTGCCCATGCCAGCCGAGTTCTTCCAC...CGCCCCAGTAGGTTCAAGGCAAAGCAGCTCTGACCGAATTCTAGGCAGGGGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp GGGGACAGCACAGTGTCCAGGAACAGCCACAGCTCAGCGCCCATATGGGGGATAGCCAGTGCCCTTTTCTaGGCCTTTCTGGCTGGCAGA +
Preference number: 4 (lower is better)
Translates to: GDSTVSRNSHSSAPIWGIASALF*AFLAGR
Trigger: TCTGCCAGCCAGAAAGGCCCAGAAAAGGGCACTGGC...TATCCCCCATATGGGCGCTGAGCTGTGGCTGTTCCTGGACACTGTGCTGTCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp CTGAAGCCCTCGGAGGGGGTCTTAGCAAAGGCAAGGTTATTGCTGAAGTACAGCACGTGTCGCTCCCGGTaGCCTGCCGGAGGAGGGTAC +
Preference number: 4 (lower is better)
Translates to: LKPSEGVLAKARLLLKYSTCRSR*PAGGGY
Trigger: GTACCCTCCTCCGGCAGGCCACCGGGAGCGACACGT...GCTGTACTTCAGCAATAACCTTGCCTTTGCTAAGACCCCCTCCGAGGGCTTCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp AAAGTCAAGTCTGTCTGCTTCCCTCCAACTGCGAGAGCTCAGGGTCAGCCAGGACGTCCGAGGGGTCCATaGAGTCGTGGTGGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: KVKSVCFPPTARAQGQPGRPRGP*SRGGCS
Trigger: GCTGCACCCACCACGACTCCATGGACCCCTCGGACG...TCCTGGCTGACCCTGAGCTCTCGCAGTTGGAGGGAAGCAGACAGACTTGACTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp GAATTCGGTCAGAGCTGCTTTGCCTTGAACCTACTGGGGCGGGGGCATAGTTGCGCCCTGGGGTGGGTCTaGCCAGAATCCCAGAGCATC +
Preference number: 4 (lower is better)
Translates to: EFGQSCFALNLLGRGHSCALGWV*PESQSI
Trigger: GATGCTCTGGGATTCTGGCCAGACCCACCCCAGGGC...GCAACTATGCCCCCGCCCCAGTAGGTTCAAGGCAAAGCAGCTCTGACCGAATTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp CCACCCCTGCCTAGAATTCGGTCAGAGCTGCTTTGCCTTGAACCTACTGGGGCGGCAGGACATGTGCCCTaGGGTGGGTCTGGCCAGAAT +
Preference number: 4 (lower is better)
Translates to: PPLPRIRSELLCLEPTGAAGHVP*GGSGQN
Trigger: ATTCTGGCCAGACCCACCCCAGGGCACATGTCCTGC...CGCCCCAGTAGGTTCAAGGCAAAGCAGCTCTGACCGAATTCTAGGCAGGGGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp GGGGACAGCACAGTGTCCAGGAACAGCCACAGCTCAGCGCCCATATGGGGGATAAGACACCCCGACACGTaGGAGCCACGTGGGATCTTA +
Preference number: 4 (lower is better)
Translates to: GDSTVSRNSHSSAPIWGIRHPDT*EPRGIL
Trigger: TAAGATCCCACGTGGCTCCCACGTGTCGGGGTGTCT...TATCCCCCATATGGGCGCTGAGCTGTGGCTGTTCCTGGACACTGTGCTGTCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp GAATTCGGTCAGAGCTGCTTTGCCTTGAACCTACTGGGGCGGGGGCATAGTTGCGAAGTGCTCAGGAGCTaGGGACCTCACCTGGGGCCA +
Preference number: 4 (lower is better)
Translates to: EFGQSCFALNLLGRGHSCEVLRS*GPHLGP
Trigger: TGGCCCCAGGTGAGGTCCCCAGCTCCTGAGCACTTC...GCAACTATGCCCCCGCCCCAGTAGGTTCAAGGCAAAGCAGCTCTGACCGAATTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp GCCCCTCCAAGCAAGCCACTGCCGGCTCAGTCTCCCGCACCCTTCCTCTGCAGGTTCCAAGTCAGAGTTTaGGAACAAGAACAAGGCCCC +
Preference number: 4 (lower is better)
Translates to: APPSKPLPAQSPAPFLCRFQVRV*EQEQGP
Trigger: GGGGCCTTGTTCTTGTTCCCAAACTCTGACTTGGAA...CCTGCAGAGGAAGGGTGCGGGAGACTGAGCCGGCAGTGGCTTGCTTGGAGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp CTGCCTCGAGGTGTCTGCTTGCAGAGTCACACGGTTCAGGGTAAGGGGAGGTTTTGGAGCGGGCAGTGTTaGGCTTGGACCGAGCCATCC +
Preference number: 4 (lower is better)
Translates to: LPRGVCLQSHTVQGKGRFWSGQC*AWTEPS
Trigger: GGATGGCTCGGTCCAAGCCCAACACTGCCCGCTCCA...AAACCTCCCCTTACCCTGAACCGTGTGACTCTGCAAGCAGACACCTCGAGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp GCCATGGGCCAGCAGGTACCAGCGCCATCAGCAACTAGGAGGGAAGTTCATTCATGGAGCGGGCAGTGTTaGGCTTGGACCGAGCCATCC +
Preference number: 4 (lower is better)
Translates to: AMGQQVPAPSATRREVHSWSGQC*AWTEPS
Trigger: GGATGGCTCGGTCCAAGCCCAACACTGCCCGCTCCA...TGAATGAACTTCCCTCCTAGTTGCTGATGGCGCTGGTACCTGCTGGCCCATGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp CCACCCCTGCCTAGAATTCGGTCAGAGCTGCTTTGCCTTGAACCTACTGGGGCGACAAGGTCAAGTGCCTaGGATCGGCAGGTGGGGCCT +
Preference number: 4 (lower is better)
Translates to: PPLPRIRSELLCLEPTGATRSSA*DRQVGP
Trigger: AGGCCCCACCTGCCGATCCCAGGCACTTGACCTTGT...CGCCCCAGTAGGTTCAAGGCAAAGCAGCTCTGACCGAATTCTAGGCAGGGGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp CTGCCTCGAGGTGTCTGCTTGCAGAGTCACACGGTTCAGGGTAAGGGGAGGTTTAAACGGGGCTGGGGTTaGCCCTGGAAGCGGAAGGCT +
Preference number: 4 (lower is better)
Translates to: LPRGVCLQSHTVQGKGRFKRGWG*PWKRKA
Trigger: AGCCTTCCGCTTCCAGGGCCAACCCCAGCCCCGTTT...AAACCTCCCCTTACCCTGAACCGTGTGACTCTGCAAGCAGACACCTCGAGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp CTGCCTCGAGGTGTCTGCTTGCAGAGTCACACGGTTCAGGGTAAGGGGAGGTTTAGGCCGAGGGCTTTCTaGAGGAGGTGGCCTCTGCCT +
Preference number: 4 (lower is better)
Translates to: LPRGVCLQSHTVQGKGRFRPRAF*RRWPLP
Trigger: AGGCAGAGGCCACCTCCTCCAGAAAGCCCTCGGCCT...AAACCTCCCCTTACCCTGAACCGTGTGACTCTGCAAGCAGACACCTCGAGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp GCACAGATGCCAAGGTGCCTGCCCACCACCGCTCTACGGAGCCCAGCAGACAGCAAACAACACTGGTGGTaGCTGCCGCTTGGTTTCTCT +
Preference number: 4 (lower is better)
Translates to: AQMPRCLPTTALRSPADSKQHWW*LPLGFS
Trigger: AGAGAAACCAAGCGGCAGCCACCACCAGTGTTGTTT...GCTGTCTGCTGGGCTCCGTAGAGCGGTGGTGGGCAGGCACCTTGGCATCTGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR CAA 72 bp CTGTGGACCCTGGAGCCTTCGCTCATGCCCATCCCTTaGCCTAGAACACCTGCCTCGAGGTGTCTGCTTGCA +
Preference number: 4 (lower is better)
Translates to: LWTLEPSLMPIP*PRTPASRCLLA
Trigger: TGCAAGCAGACACCTCGAGGCAGGTGTTCTAGGCAAAGGGATGGGCATGAGCGAAGGCTCCAGGGTCCACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR TCA 90 bp TATATATATATGTATGTATATGCACTGGAAGGGCCACCATGGGCCACGCAGGCCAGAGGCCGCTGGCATTaGGGTCCTGGCGCCCCGCCC +
Preference number: 4 (lower is better)
Translates to: YIYMYVYALEGPPWATQARGRWH*GPGAPP
Trigger: GGGCGGGGCGCCAGGACCTCAATGCCAGCGGCCTCT...GGCCTGCGTGGCCCATGGTGGCCCTTCCAGTGCATATACATACATATATATATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR TCA 90 bp TGGACCCTGGAGCCTTCGCTCATGCCCATCCCTTTGCCTAGAACACCTGCCTCGAGTAACGGTTCCAGTTaGCACAGAGGCCGCTGGCAT +
Preference number: 4 (lower is better)
Translates to: WTLEPSLMPIPLPRTPASSNGSS*HRGRWH
Trigger: ATGCCAGCGGCCTCTGTGTCAACTGGAACCGTTACT...CGAGGCAGGTGTTCTAGGCAAAGGGATGGGCATGAGCGAAGGCTCCAGGGTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR TCA 90 bp TTCCCAAACCCCCTTGCACGGTGGTGCCCTCGGCCTTTGGTTGGGTCCTTCCCCGGGCAAACATGCTGGTaGAGACCACATTGCAGATCT +
Preference number: 4 (lower is better)
Translates to: FPNPLARWCPRPLVGSFPGQTCW*RPHCRS
Trigger: AGATCTGCAATGTGGTCTTCACCAGCATGTTTGCCC...GGGGAAGGACCCAACCAAAGGCCGAGGGCACCACCGTGCAAGGGGGTTTGGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR TCA 90 bp GGGGACAGCACAGTGTCCAGGAACAGCCACAGCTCAGCGCCCATATGGGGGATATCCTCCCTAGAGACATaGCACTGCTCTTTCGGGAGC +
Preference number: 4 (lower is better)
Translates to: GDSTVSRNSHSSAPIWGISSLET*HCSFGS
Trigger: GCTCCCGAAAGAGCAGTGTCATGTCTCTAGGGAGGA...TATCCCCCATATGGGCGCTGAGCTGTGGCTGTTCCTGGACACTGTGCTGTCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR TCA 90 bp AAAGTCAAGTCTGTCTGCTTCCCTCCAACTGCGAGAGCTCAGGGTCAGCCAGGAACGGCGGCTTGTGCTTaGGGCTGTTCCAGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: KVKSVCFPPTARAQGQPGTAACA*GCSSWS
Trigger: GCTCCAGCTGGAACAGCCTCAAGCACAAGCCGCCGT...TCCTGGCTGACCCTGAGCTCTCGCAGTTGGAGGGAAGCAGACAGACTTGACTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR TCA 90 bp TTGCAAAAAGTCAAGTCTGTCTGCTTCCCTCCAACTGCGAGAGCTCAGGGTCAGCTTGGCTCCCCCGGCTaGGGCCAGGGACACCACGAT +
Preference number: 4 (lower is better)
Translates to: LQKVKSVCFPPTARAQGQLGSPG*GQGHHD
Trigger: ATCGTGGTGTCCCTGGCCTCAGCCGGGGGAGCCAAG...CTGACCCTGAGCTCTCGCAGTTGGAGGGAAGCAGACAGACTTGACTTTTTGCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR TCA 90 bp AAAGTCAAGTCTGTCTGCTTCCCTCCAACTGCGAGAGCTCAGGGTCAGCCAGGAAGTCCGAGCGGTTGGTaGTGTTGCGGGTGTCCACGC +
Preference number: 4 (lower is better)
Translates to: KVKSVCFPPTARAQGQPGSPSGW*CCGCPR
Trigger: GCGTGGACACCCGCAACATCACCAACCGCTCGGACT...TCCTGGCTGACCCTGAGCTCTCGCAGTTGGAGGGAAGCAGACAGACTTGACTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR TCA 90 bp CTTGTCCTGGCCAGTGGATCACAGCTTCCCTGGTTCTCATCTCTGTCACCCACATGGGCAGGGCCGCATTaGTCTCGATCTCCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: LVLASGSQLPWFSSLSPTWAGPH*SRSPPG
Trigger: CCCTGGAGGAGATCGAGATCAATGCGGCCCTGCCCA...TGTGGGTGACAGAGATGAGAACCAGGGAAGCTGTGATCCACTGGCCAGGACAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR TCA 90 bp GAATTCGGTCAGAGCTGCTTTGCCTTGAACCTACTGGGGCGGGGGCATAGTTGCGGAGGAGGGTACAGTTaGCCCTTGGTGACCGCAGAG +
Preference number: 4 (lower is better)
Translates to: EFGQSCFALNLLGRGHSCGGGYS*PLVTAE
Trigger: CTCTGCGGTCACCAAGGGTCAACTGTACCCTCCTCC...GCAACTATGCCCCCGCCCCAGTAGGTTCAAGGCAAAGCAGCTCTGACCGAATTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR TCA 90 bp GGTCAGAGCTGCTTTGCCTTGAACCTACTGGGGCGGGGGCATAGTTGCTCAGGAACGAGACAGTCAGGATaGCAGGACAGACACCCCGAC +
Preference number: 4 (lower is better)
Translates to: GQSCFALNLLGRGHSCSGTRQSG*QDRHPD
Trigger: GTCGGGGTGTCTGTCCTGTCATCCTGACTGTCTCGT...TCCTGAGCAACTATGCCCCCGCCCCAGTAGGTTCAAGGCAAAGCAGCTCTGACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR TCA 90 bp CTGAATTGCACCTCTTCTCCAGGGCCTGGTGCCCTCAGAGGCCTGAGGGTCCTCTGCTATAGTGAAAGCTaGGCTGCAGTTAGGGGCAGC +
Preference number: 4 (lower is better)
Translates to: LNCTSSPGPGALRGLRVLCYSES*AAVRGS
Trigger: GCTGCCCCTAACTGCAGCTCAGCTTTCACTATAGCA...GAGGACCCTCAGGCCTCTGAGGGCACCAGGCCCTGGAGAAGAGGTGCAATTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR TCA 90 bp TGGACCCTGGAGCCTTCGCTCATGCCCATCCCTTTGCCTAGAACACCTGCCTCGAACCCTCACCCATGTTaGCTTGTCCTGGCCAGTGGA +
Preference number: 4 (lower is better)
Translates to: WTLEPSLMPIPLPRTPASNPHPC*LVLASG
Trigger: TCCACTGGCCAGGACAAGTCAACATGGGTGAGGGTT...CGAGGCAGGTGTTCTAGGCAAAGGGATGGGCATGAGCGAAGGCTCCAGGGTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp CTGCCTCGAGGTGTCTGCTTGCAGAGTCACACGGTTCAGGGTAAGGGGAGGTTTAGCCGGTGCTCCCGTTaGTTGGTCTCCGAGAACTGG +
Preference number: 4 (lower is better)
Translates to: LPRGVCLQSHTVQGKGRFSRCSR*LVSENW
Trigger: CCAGTTCTCGGAGACCAAGCAACGGGAGCACCGGCT...AAACCTCCCCTTACCCTGAACCGTGTGACTCTGCAAGCAGACACCTCGAGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp GCAGGGAGTTTGTGTCCTGCCCGCCAGAGCACACAGCCTGGTGTGACGGGTCAGGTCGAAGAGCCCAAATaGAGCCAGCTTCAGGATCAT +
Preference number: 4 (lower is better)
Translates to: AGSLCPARQSTQPGVTGQVEEPK*SQLQDH
Trigger: ATGATCCTGAAGCTGGCTGCATTTGGGCTCTTCGAC...CTGACCCGTCACACCAGGCTGTGTGCTCTGGCGGGCAGGACACAAACTCCCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR GCA 90 bp CAAACACCCAAGTCTAGAACCCGTTTGGGAAGCACTGCTATAGTGAAAGCTGAGTGGCCCAGGCCGCGCTaGGGCCCCATGGCCCGTAGT +
Preference number: 4 (lower is better)
Translates to: QTPKSRTRLGSTAIVKAEWPRPR*GPMARS
Trigger: ACTACGGGCCATGGGGCCGCAGCGCGGCCTGGGCCA...CTCAGCTTTCACTATAGCAGTGCTTCCCAAACGGGTTCTAGACTTGGGTGTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp CCACCCCTGCCTAGAATTCGGTCAGAGCTGCTTTGCCTTGAACCTACTGGGGCGCGATGCTGGGCATCCTaGCATTGCAGTCCTCATGCC +
Preference number: 4 (lower is better)
Translates to: PPLPRIRSELLCLEPTGARCWAS*HCSPHA
Trigger: GGCATGAGGACTGCAATGGCAGGATGCCCAGCATCG...CGCCCCAGTAGGTTCAAGGCAAAGCAGCTCTGACCGAATTCTAGGCAGGGGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp GAGTTTGTGTCCTGCCCGCCAGAGCACACAGCCTGGTGTGACGGGTCAGACAGTTGGTTGGTCACAGGCTaGTGGTCCACAGCAACAGCA +
Preference number: 4 (lower is better)
Translates to: EFVSCPPEHTAWCDGSDSWLVTG*WSTATA
Trigger: TGCTGTTGCTGTGGACCAGCAGCCTGTGACCAACCA...ACTGTCTGACCCGTCACACCAGGCTGTGTGCTCTGGCGGGCAGGACACAAACTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR GCA 90 bp CAGCACAGTGTCCAGGAACAGCCACAGCTCAGCGCCCATATGGGGGATAAAAGGAGAGGAGGCCCAGGTTaGCCACCTGGGGCAAAGCTT +
Preference number: 4 (lower is better)
Translates to: QHSVQEQPQLSAHMGDKRRGGPG*PPGAKL
Trigger: AAGCTTTGCCCCAGGTGGGCAACCTGGGCCTCCTCT...CCTTTTATCCCCCATATGGGCGCTGAGCTGTGGCTGTTCCTGGACACTGTGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp TGGACCCTGGAGCCTTCGCTCATGCCCATCCCTTTGCCTAGAACACCTGCCTCGTTGATGAGCACGAACTaGGCGGTGAGCACGAAGCTC +
Preference number: 4 (lower is better)
Translates to: WTLEPSLMPIPLPRTPASLMSTN*AVSTKL
Trigger: GAGCTTCGTGCTCACCGCGCAGTTCGTGCTCATCAA...CGAGGCAGGTGTTCTAGGCAAAGGGATGGGCATGAGCGAAGGCTCCAGGGTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp GCCATGGGCCAGCAGGTACCAGCGCCATCAGCAACTAGGAGGGAAGTTCATTCACTCATCTCTTCCTCTTaGTGGCGGCGTCTCCCGGCT +
Preference number: 4 (lower is better)
Translates to: AMGQQVPAPSATRREVHSLISSS*WRRLPA
Trigger: AGCCGGGAGACGCCGCCAGCAAGAGGAAGAGATGAG...TGAATGAACTTCCCTCCTAGTTGCTGATGGCGCTGGTACCTGCTGGCCCATGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp CTGCCTCGAGGTGTCTGCTTGCAGAGTCACACGGTTCAGGGTAAGGGGAGGTTTCTCATCTCTTCCTCTTaGTGGCGGCGTCTCCCGGCT +
Preference number: 4 (lower is better)
Translates to: LPRGVCLQSHTVQGKGRFLISSS*WRRLPA
Trigger: AGCCGGGAGACGCCGCCAGCAAGAGGAAGAGATGAG...AAACCTCCCCTTACCCTGAACCGTGTGACTCTGCAAGCAGACACCTCGAGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp CTGAATTGCACCTCTTCTCCAGGGCCTGGTGCCCTCAGAGGCCTGAGGGTCCTCGTGTGGACGAAGTATTaGTGTCTGCTCCTGGCTCCT +
Preference number: 4 (lower is better)
Translates to: LNCTSSPGPGALRGLRVLVWTKY*CLLLAP
Trigger: AGGAGCCAGGAGCAGACAGCAATACTTCGTCCACAC...GAGGACCCTCAGGCCTCTGAGGGCACCAGGCCCTGGAGAAGAGGTGCAATTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp GCCATGGGCCAGCAGGTACCAGCGCCATCAGCAACTAGGAGGGAAGTTCATTCAGCTCAGCCTTGGAGCTaGTCTCCATCCCCTACCCCA +
Preference number: 4 (lower is better)
Translates to: AMGQQVPAPSATRREVHSAQPWS*SPSPTP
Trigger: TGGGGTAGGGGATGGAGAGCAGCTCCAAGGCTGAGC...TGAATGAACTTCCCTCCTAGTTGCTGATGGCGCTGGTACCTGCTGGCCCATGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp AAAGTCAAGTCTGTCTGCTTCCCTCCAACTGCGAGAGCTCAGGGTCAGCCAGGACTCCAAGCAAGCCACTaGCGGCTCAGTCTCCCGCAC +
Preference number: 4 (lower is better)
Translates to: KVKSVCFPPTARAQGQPGLQASH*RLSLPH
Trigger: GTGCGGGAGACTGAGCCGGCAGTGGCTTGCTTGGAG...TCCTGGCTGACCCTGAGCTCTCGCAGTTGGAGGGAAGCAGACAGACTTGACTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp GCCATGGGCCAGCAGGTACCAGCGCCATCAGCAACTAGGAGGGAAGTTCATTCAAGGTGCCCCCACCCCTaGCTAGAATTCGGTCAGAGC +
Preference number: 4 (lower is better)
Translates to: AMGQQVPAPSATRREVHSRCPHP*LEFGQS
Trigger: GCTCTGACCGAATTCTAGGCAGGGGTGGGGGCACCT...TGAATGAACTTCCCTCCTAGTTGCTGATGGCGCTGGTACCTGCTGGCCCATGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp CCACCCCTGCCTAGAATTCGGTCAGAGCTGCTTTGCCTTGAACCTACTGGGGCGCAAACTCGTGGCCCCTaGAGCCTCTCCAGATCACTG +
Preference number: 4 (lower is better)
Translates to: PPLPRIRSELLCLEPTGAQTRGP*SLSRSL
Trigger: CAGTGATCTGGAGAGGCTGCAGGGGCCACGAGTTTG...CGCCCCAGTAGGTTCAAGGCAAAGCAGCTCTGACCGAATTCTAGGCAGGGGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp TTGCAAAAAGTCAAGTCTGTCTGCTTCCCTCCAACTGCGAGAGCTCAGGGTCAGCCCCACAGGTCTACCTaGCCCCAGGGAGGACTGGGC +
Preference number: 4 (lower is better)
Translates to: LQKVKSVCFPPTARAQGQPHRST*PQGGLG
Trigger: GCCCAGTCCTCCCTGGGGGCAGGTAGACCTGTGGGG...CTGACCCTGAGCTCTCGCAGTTGGAGGGAAGCAGACAGACTTGACTTTTTGCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp GCACAGATGCCAAGGTGCCTGCCCACCACCGCTCTACGGAGCCCAGCAGACAGCAAAGTCAAGTCTGTCTaGTTCCCTCCAACTGCGAGA +
Preference number: 4 (lower is better)
Translates to: AQMPRCLPTTALRSPADSKVKSV*FPPTAR
Trigger: TCTCGCAGTTGGAGGGAAGCAGACAGACTTGACTTT...GCTGTCTGCTGGGCTCCGTAGAGCGGTGGTGGGCAGGCACCTTGGCATCTGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp GGTCAGAGCTGCTTTGCCTTGAACCTACTGGGGCGGGGGCATAGTTGCTCAGGATCTCCCAGTGCTCCCTaGAAGGAGCTTCTCTGCCTC +
Preference number: 4 (lower is better)
Translates to: GQSCFALNLLGRGHSCSGSPSAP*KELLCL
Trigger: GAGGCAGAGAAGCTCCTTGCAGGGAGCACTGGGAGA...TCCTGAGCAACTATGCCCCCGCCCCAGTAGGTTCAAGGCAAAGCAGCTCTGACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp GGGGACAGCACAGTGTCCAGGAACAGCCACAGCTCAGCGCCCATATGGGGGATAGAAGGAAGGGCCCTTTaGCCAACCCTCACCCATGTT +
Preference number: 4 (lower is better)
Translates to: GDSTVSRNSHSSAPIWGIEGRAL*PTLTHV
Trigger: AACATGGGTGAGGGTTGGGCAAAGGGCCCTTCCTTC...TATCCCCCATATGGGCGCTGAGCTGTGGCTGTTCCTGGACACTGTGCTGTCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp CAGCACAGTGTCCAGGAACAGCCACAGCTCAGCGCCCATATGGGGGATAAAAGGAGATGCCAAGGTGCCTaGCCACCACCGCTCTACGGA +
Preference number: 4 (lower is better)
Translates to: QHSVQEQPQLSAHMGDKRRCQGA*PPPLYG
Trigger: TCCGTAGAGCGGTGGTGGGCAGGCACCTTGGCATCT...CCTTTTATCCCCCATATGGGCGCTGAGCTGTGGCTGTTCCTGGACACTGTGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp GCCATGGGCCAGCAGGTACCAGCGCCATCAGCAACTAGGAGGGAAGTTCATTCAGCACAGATGCCAAGGTaGCTGCCCACCACCGCTCTA +
Preference number: 4 (lower is better)
Translates to: AMGQQVPAPSATRREVHSAQMPR*LPTTAL
Trigger: TAGAGCGGTGGTGGGCAGGCACCTTGGCATCTGTGC...TGAATGAACTTCCCTCCTAGTTGCTGATGGCGCTGGTACCTGCTGGCCCATGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp GAATTCGGTCAGAGCTGCTTTGCCTTGAACCTACTGGGGCGGGGGCATAGTTGCCCGTCTCTGCACAGATaGCAAGGTGCCTGCCCACCA +
Preference number: 4 (lower is better)
Translates to: EFGQSCFALNLLGRGHSCPSLHR*QGACPP
Trigger: TGGTGGGCAGGCACCTTGGCATCTGTGCAGAGACGG...GCAACTATGCCCCCGCCCCAGTAGGTTCAAGGCAAAGCAGCTCTGACCGAATTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp CCACCCCTGCCTAGAATTCGGTCAGAGCTGCTTTGCCTTGAACCTACTGGGGCGCCTCCTTTAAGGGGCTaGCTGGTGCCGGAGAAGGTA +
Preference number: 4 (lower is better)
Translates to: PPLPRIRSELLCLEPTGAPPLRG*LVPEKV
Trigger: TACCTTCTCCGGCACCAGGCAGCCCCTTAAAGGAGG...CGCCCCAGTAGGTTCAAGGCAAAGCAGCTCTGACCGAATTCTAGGCAGGGGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp TTGCAAAAAGTCAAGTCTGTCTGCTTCCCTCCAACTGCGAGAGCTCAGGGTCAGCTCCGTGGTGACTCCTaGCTCAGCGGCTGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: LQKVKSVCFPPTARAQGQLRGDS*LSGWGC
Trigger: GCAGCCCCAGCCGCTGAGCCAGGAGTCACCACGGAG...CTGACCCTGAGCTCTCGCAGTTGGAGGGAAGCAGACAGACTTGACTTTTTGCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp CTGAAGCCCTCGGAGGGGGTCTTAGCAAAGGCAAGGTTATTGCTGAAGTACAGCCTGGCATTGAGGTCCTaGCGCCCCGCCCCAAAGTCG +
Preference number: 4 (lower is better)
Translates to: LKPSEGVLAKARLLLKYSLALRS*RPAPKS
Trigger: CGACTTTGGGGCGGGGCGCCAGGACCTCAATGCCAG...GCTGTACTTCAGCAATAACCTTGCCTTTGCTAAGACCCCCTCCGAGGGCTTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp TCACCCAGTGAATCAACTGCACTCACTGTGGGAGCCGGCCCGGCCCCATTTCCCTTGGTCTCCGAGAACTaGGTCGCTATGACAACGAGG +
Preference number: 4 (lower is better)
Translates to: SPSESTALTVGAGPAPFPLVSEN*VAMTTR
Trigger: CCTCGTTGTCATAGCGACCCAGTTCTCGGAGACCAA...GGGAAATGGGGCCGGGCCGGCTCCCACAGTGAGTGCAGTTGATTCACTGGGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR CCA 90 bp CCTAGTAATCAAGCCCCCACTCACACCCACCCAGAGCACCCAGGGTGTCCTCCCGCCTTGCGCAGGATGTaGCAGACATACTGGAAGATC +
Preference number: 4 (lower is better)
Translates to: PSNQAPTHTHPEHPGCPPALRRM*QTYWKI
Trigger: GATCTTCCAGTATGTCTGCCACATCCTGCGCAAGGC...GGGAGGACACCCTGGGTGCTCTGGGTGGGTGTGAGTGGGGGCTTGATTACTAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR CCA 90 bp GGGGACAGCACAGTGTCCAGGAACAGCCACAGCTCAGCGCCCATATGGGGGATATCCTGGGTGAGGATCTaGAACACAGTGACGATGGCC +
Preference number: 4 (lower is better)
Translates to: GDSTVSRNSHSSAPIWGISWVRI*NTVTMA
Trigger: GGCCATCGTCACTGTGTTCCAGATCCTCACCCAGGA...TATCCCCCATATGGGCGCTGAGCTGTGGCTGTTCCTGGACACTGTGCTGTCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp CCACCCCTGCCTAGAATTCGGTCAGAGCTGCTTTGCCTTGAACCTACTGGGGCGGGATTGGGCAGAGCTTaGGATCTCCGCTGCTGTCCA +
Preference number: 4 (lower is better)
Translates to: PPLPRIRSELLCLEPTGAGLGRA*DLRCCP
Trigger: TGGACAGCAGCGGAGATCCCAAGCTCTGCCCAATCC...CGCCCCAGTAGGTTCAAGGCAAAGCAGCTCTGACCGAATTCTAGGCAGGGGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp AAAGTCAAGTCTGTCTGCTTCCCTCCAACTGCGAGAGCTCAGGGTCAGCCAGGAGGTCCAGGTGCCCATTaGGGGTCATGGGGATTGGGC +
Preference number: 4 (lower is better)
Translates to: KVKSVCFPPTARAQGQPGGPGAH*GSWGLG
Trigger: GCCCAATCCCCATGACCCCCAATGGGCACCTGGACC...TCCTGGCTGACCCTGAGCTCTCGCAGTTGGAGGGAAGCAGACAGACTTGACTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp TTGCAAAAAGTCAAGTCTGTCTGCTTCCCTCCAACTGCGAGAGCTCAGGGTCAGGGGTCCATGGAGTCGTaGTGGGTGCAGCCCGGGCTG +
Preference number: 4 (lower is better)
Translates to: LQKVKSVCFPPTARAQGQGSMES*WVQPGL
Trigger: CAGCCCGGGCTGCACCCACCACGACTCCATGGACCC...CTGACCCTGAGCTCTCGCAGTTGGAGGGAAGCAGACAGACTTGACTTTTTGCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp GCCATGGGCCAGCAGGTACCAGCGCCATCAGCAACTAGGAGGGAAGTTCATTCAATCTCTTCCTCTTGCTaGCGGCGTCTCCCGGCTCCA +
Preference number: 4 (lower is better)
Translates to: AMGQQVPAPSATRREVHSISSSC*RRLPAP
Trigger: TGGAGCCGGGAGACGCCGCCAGCAAGAGGAAGAGAT...TGAATGAACTTCCCTCCTAGTTGCTGATGGCGCTGGTACCTGCTGGCCCATGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp GAGGCTCTCTGGAGCGGGCAGTGTTGGGCTTGGACCGAGCCATCCCCACAGGTCAGCTCAGCGCCCATATaGGGGATAAAAGGCATTAGT +
Preference number: 4 (lower is better)
Translates to: EALWSGQCWAWTEPSPQVSSAPI*GIKGIS
Trigger: ACTAATGCCTTTTATCCCCCATATGGGCGCTGAGCT...GACCTGTGGGGATGGCTCGGTCCAAGCCCAACACTGCCCGCTCCAGAGAGCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp AAAGTCAAGTCTGTCTGCTTCCCTCCAACTGCGAGAGCTCAGGGTCAGCCAGGAAAACGGGGCTGGGGTTaGCCCTGGAAGCGGAAGGCT +
Preference number: 4 (lower is better)
Translates to: KVKSVCFPPTARAQGQPGKRGWG*PWKRKA
Trigger: AGCCTTCCGCTTCCAGGGCCAACCCCAGCCCCGTTT...TCCTGGCTGACCCTGAGCTCTCGCAGTTGGAGGGAAGCAGACAGACTTGACTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp AAAGTCAAGTCTGTCTGCTTCCCTCCAACTGCGAGAGCTCAGGGTCAGCCAGGAGTGGTGGCTGCCGCTTaGTTTCTCTACACCCGGGCC +
Preference number: 4 (lower is better)
Translates to: KVKSVCFPPTARAQGQPGVVAAA*FLYTRA
Trigger: GGCCCGGGTGTAGAGAAACCAAGCGGCAGCCACCAC...TCCTGGCTGACCCTGAGCTCTCGCAGTTGGAGGGAAGCAGACAGACTTGACTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp GCACAGATGCCAAGGTGCCTGCCCACCACCGCTCTACGGAGCCCAGCAGACAGCTATTCAAAACAACACTaGTGGTGGCTGCCGCTTGGT +
Preference number: 4 (lower is better)
Translates to: AQMPRCLPTTALRSPADSYSKQH*WWLPLG
Trigger: ACCAAGCGGCAGCCACCACCAGTGTTGTTTTGAATA...GCTGTCTGCTGGGCTCCGTAGAGCGGTGGTGGGCAGGCACCTTGGCATCTGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp AGTACAGCATCTGCAAACTCGTGGCCCCTGCAGCCTCTCCAGATCACTGCCACCGGCCCATGCAAAGTCTaGCAATGCCGGCTTCCGAGA +
Preference number: 4 (lower is better)
Translates to: STASANSWPLQPLQITATGPCKV*QCRLPR
Trigger: TCTCGGAAGCCGGCATTGCCAGACTTTGCATGGGCC...GGTGGCAGTGATCTGGAGAGGCTGCAGGGGCCACGAGTTTGCAGATGCTGTACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402142.4
CDS-3UTR TCA 90 bp GAGTTTGTGTCCTGCCCGCCAGAGCACACAGCCTGGTGTGACGGGTCAGACAGTGGATCACCAGCATGCTaGCACATTCAAACCACGGGT +
Preference number: 4 (lower is better)
Translates to: EFVSCPPEHTAWCDGSDSGSPAC*HIQTTG
Trigger: ACCCGTGGTTTGAATGTGTCAGCATGCTGGTGATCC...ACTGTCTGACCCGTCACACCAGGCTGTGTGCTCTGGCGGGCAGGACACAAACTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR TCA 90 bp AGTTTGTGTCCTGCCCGCCAGAGCACACAGCCTGGTGTGACGGGTCAGACAGTCCATCCCCTTGTATGGTaGAGTTCTCCTCCAGGAAGC +
Preference number: 4 (lower is better)
Translates to: SLCPARQSTQPGVTGQTVHPLVW*SSPPGS
Trigger: GCTTCCTGGAGGAGAACTTCACCATACAAGGGGATG...GACTGTCTGACCCGTCACACCAGGCTGTGTGCTCTGGCGGGCAGGACACAAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR TCA 90 bp GGTCAGAGCTGCTTTGCCTTGAACCTACTGGGGCGGGGGCATAGTTGCTCAGGACCGACAGGGAGCAGATaGAGGGCATCTCATCATCCT +
Preference number: 4 (lower is better)
Translates to: GQSCFALNLLGRGHSCSGPTGSR*RASHHP
Trigger: AGGATGATGAGATGCCCTTCATCTGCTCCCTGTCGG...TCCTGAGCAACTATGCCCCCGCCCCAGTAGGTTCAAGGCAAAGCAGCTCTGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR TCA 90 bp CCACCCCTGCCTAGAATTCGGTCAGAGCTGCTTTGCCTTGAACCTACTGGGGCGTGGGCAATAATGGTCTaGCACAGGACCCGGAACCTG +
Preference number: 4 (lower is better)
Translates to: PPLPRIRSELLCLEPTGAWAIMV*HRTRNL
Trigger: CAGGTTCCGGGTCCTGTGTCAGACCATTATTGCCCA...CGCCCCAGTAGGTTCAAGGCAAAGCAGCTCTGACCGAATTCTAGGCAGGGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR TCA 90 bp CCACCCCTGCCTAGAATTCGGTCAGAGCTGCTTTGCCTTGAACCTACTGGGGCGTCTTGCTTGTCGTGGTaGCACTTCTTGCAGCCGGCA +
Preference number: 4 (lower is better)
Translates to: PPLPRIRSELLCLEPTGASCLSW*HFLQPA
Trigger: TGCCGGCTGCAAGAAGTGTCACCACGACAAGCAAGA...CGCCCCAGTAGGTTCAAGGCAAAGCAGCTCTGACCGAATTCTAGGCAGGGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR TCA 90 bp GCCATGGGCCAGCAGGTACCAGCGCCATCAGCAACTAGGAGGGAAGTTCATTCAACAGTTGACCCTTGGTaGCCGCAGAGATGCCCAGGA +
Preference number: 4 (lower is better)
Translates to: AMGQQVPAPSATRREVHSTVDPW*PQRCPG
Trigger: TCCTGGGCATCTCTGCGGTCACCAAGGGTCAACTGT...TGAATGAACTTCCCTCCTAGTTGCTGATGGCGCTGGTACCTGCTGGCCCATGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR TCA 90 bp TGTCCTGGCCAGTGGATCACAGCTTCCCTGGTTCTCATCTCTGTCACCCACAGGACAGTTGACCCTTGGTaGCCGCAGAGATGCCCAGGA +
Preference number: 4 (lower is better)
Translates to: CPGQWITASLVLISVTHRTVDPW*PQRCPG
Trigger: TCCTGGGCATCTCTGCGGTCACCAAGGGTCAACTGT...CCTGTGGGTGACAGAGATGAGAACCAGGGAAGCTGTGATCCACTGGCCAGGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR TCA 90 bp CCACCCCTGCCTAGAATTCGGTCAGAGCTGCTTTGCCTTGAACCTACTGGGGCGTCTGCTCCTGGCTCCTaGGGTAAAGAAGGTGAGACG +
Preference number: 4 (lower is better)
Translates to: PPLPRIRSELLCLEPTGASAPGS*GKEGET
Trigger: CGTCTCACCTTCTTTACCTCAGGAGCCAGGAGCAGA...CGCCCCAGTAGGTTCAAGGCAAAGCAGCTCTGACCGAATTCTAGGCAGGGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR TCA 90 bp CTGAAGCCCTCGGAGGGGGTCTTAGCAAAGGCAAGGTTATTGCTGAAGTACAGCGTGCCCTCAGAGGCCTaGGGGTCCTCTCCAAGCTAC +
Preference number: 4 (lower is better)
Translates to: LKPSEGVLAKARLLLKYSVPSEA*GSSPSY
Trigger: GTAGCTTGGAGAGGACCCTCAGGCCTCTGAGGGCAC...GCTGTACTTCAGCAATAACCTTGCCTTTGCTAAGACCCCCTCCGAGGGCTTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR TCA 90 bp CAGCACAGTGTCCAGGAACAGCCACAGCTCAGCGCCCATATGGGGGATAAAAGGGAACAACTAACTACCTaGGCCCAGGGGCACCTGCAG +
Preference number: 4 (lower is better)
Translates to: QHSVQEQPQLSAHMGDKREQLTT*AQGHLQ
Trigger: CTGCAGGTGCCCCTGGGCTCAGGTAGTTAGTTGTTC...CCTTTTATCCCCCATATGGGCGCTGAGCTGTGGCTGTTCCTGGACACTGTGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR TCA 90 bp AGTACAGCATCTGCAAACTCGTGGCCCCTGCAGCCTCTCCAGATCACTGCCACCCCTGCTCAGCTGCTCTaGACCCATGTGACAACAGGA +
Preference number: 4 (lower is better)
Translates to: STASANSWPLQPLQITATPAQLL*THVTTG
Trigger: TCCTGTTGTCACATGGGTTCAGAGCAGCTGAGCAGG...GGTGGCAGTGATCTGGAGAGGCTGCAGGGGCCACGAGTTTGCAGATGCTGTACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR TCA 90 bp CGGGTCAGACAGTCACCCAGTGAATCAACTGCACTCACTGTGGGAGCCGGCCCGCAGACAGTCACCCAGTaGATCAACTGCACTCACTGT +
Preference number: 4 (lower is better)
Translates to: RVRQSPSESTALTVGAGPQTVTQ*INCTHC
Trigger: ACAGTGAGTGCAGTTGATTCACTGGGTGACTGTCTG...CGGGCCGGCTCCCACAGTGAGTGCAGTTGATTCACTGGGTGACTGTCTGACCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR GCA 90 bp CCACCCCTGCCTAGAATTCGGTCAGAGCTGCTTTGCCTTGAACCTACTGGGGCGCGCACGGCTGGTACATaGCAAGTGTCACGCAGTTCA +
Preference number: 4 (lower is better)
Translates to: PPLPRIRSELLCLEPTGARTAGT*QVSRSS
Trigger: TGAACTGCGTGACACTTGGCATGTACCAGCCGTGCG...CGCCCCAGTAGGTTCAAGGCAAAGCAGCTCTGACCGAATTCTAGGCAGGGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp TGTCCTGGCCAGTGGATCACAGCTTCCCTGGTTCTCATCTCTGTCACCCACAGGAGACCTGCAGGATCTTaGAGCGGTCGGACAGGCAGT +
Preference number: 4 (lower is better)
Translates to: CPGQWITASLVLISVTHRRPAGS*SGRTGS
Trigger: ACTGCCTGTCCGACCGCTGCAAGATCCTGCAGGTCT...CCTGTGGGTGACAGAGATGAGAACCAGGGAAGCTGTGATCCACTGGCCAGGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp CCCTTGCACGGTGGTGCCCTCGGCCTTTGGTTGGGTCCTTCCCCTCCCAGTCCCTTGCAGCCAAAAATATaGATCCCAAGGATGCTGAAG +
Preference number: 4 (lower is better)
Translates to: PLHGGALGLWLGPSPPSPLQPKI*IPRMLK
Trigger: CTTCAGCATCCTTGGGATGCATATTTTTGGCTGCAA...GGGACTGGGAGGGGAAGGACCCAACCAAAGGCCGAGGGCACCACCGTGCAAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR GCA 90 bp GGCCGTCTCTGCACAGATGCCAAGGTGCCTGCCCACCACCGCTCTACGGAGCCCTTGCAGCCAAAAATATaGATCCCAAGGATGCTGAAG +
Preference number: 4 (lower is better)
Translates to: GRLCTDAKVPAHHRSTEPLQPKI*IPRMLK
Trigger: CTTCAGCATCCTTGGGATGCATATTTTTGGCTGCAA...GGGCTCCGTAGAGCGGTGGTGGGCAGGCACCTTGGCATCTGTGCAGAGACGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp AAAGTCAAGTCTGTCTGCTTCCCTCCAACTGCGAGAGCTCAGGGTCAGCCAGGAGCTTGGGATCTCCGCTaGTGTCCAGGCCTTCCTGGA +
Preference number: 4 (lower is better)
Translates to: KVKSVCFPPTARAQGQPGAWDLR*CPGLPG
Trigger: TCCAGGAAGGCCTGGACAGCAGCGGAGATCCCAAGC...TCCTGGCTGACCCTGAGCTCTCGCAGTTGGAGGGAAGCAGACAGACTTGACTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp CCACCCCTGCCTAGAATTCGGTCAGAGCTGCTTTGCCTTGAACCTACTGGGGCGAGACGTCTTTGGCGATaGTGGGCATCCTGCCATTGC +
Preference number: 4 (lower is better)
Translates to: PPLPRIRSELLCLEPTGARRLWR*WASCHC
Trigger: GCAATGGCAGGATGCCCAGCATCGCCAAAGACGTCT...CGCCCCAGTAGGTTCAAGGCAAAGCAGCTCTGACCGAATTCTAGGCAGGGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp CTGAAGCCCTCGGAGGGGGTCTTAGCAAAGGCAAGGTTATTGCTGAAGTACAGCCTGCGTAGGTACGCCTaGTCGCCGAAGTACAGGCCC +
Preference number: 4 (lower is better)
Translates to: LKPSEGVLAKARLLLKYSLRRYA*SPKYRP
Trigger: GGGCCTGTACTTCGGCGAGCAGGCGTACCTACGCAG...GCTGTACTTCAGCAATAACCTTGCCTTTGCTAAGACCCCCTCCGAGGGCTTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp AGGGAGTTTGTGTCCTGCCCGCCAGAGCACACAGCCTGGTGTGACGGGTCAGACCCAACCATCCTTGGATaGCAGGACAAAGAGGGACAT +
Preference number: 4 (lower is better)
Translates to: REFVSCPPEHTAWCDGSDPTILG*QDKEGH
Trigger: ATGTCCCTCTTTGTCCTGGCATCCAAGGATGGTTGG...GTCTGACCCGTCACACCAGGCTGTGTGCTCTGGCGGGCAGGACACAAACTCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR GCA 90 bp AAAGTCAAGTCTGTCTGCTTCCCTCCAACTGCGAGAGCTCAGGGTCAGCCAGGACGTGGTGACACTTCTTaGAGCCGGCAGGCGAGGAGT +
Preference number: 4 (lower is better)
Translates to: KVKSVCFPPTARAQGQPGRGDTS*SRQARS
Trigger: ACTCCTCGCCTGCCGGCTGCAAGAAGTGTCACCACG...TCCTGGCTGACCCTGAGCTCTCGCAGTTGGAGGGAAGCAGACAGACTTGACTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp CAGCAACTAGGAGGGAAGTTCATTCACACCATAGAAACTGTACAGCGACTGAGAGCGTGGTCTGCAGGCTaGCCGCGGAGCTGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: QQLGGKFIHTIETVQRLRAWSAG*PRSCWG
Trigger: GCCCCAGCAGCTCCGCGGGCAGCCTGCAGACCACGC...TCTCAGTCGCTGTACAGTTTCTATGGTGTGAATGAACTTCCCTCCTAGTTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp CAAACACCCAAGTCTAGAACCCGTTTGGGAAGCACTGCTATAGTGAAAGCTGAGGCGGCCGGGGGCCCCTaGGACCCTCATCTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: QTPKSRTRLGSTAIVKAEAAGGP*DPHLFL
Trigger: GAGGAAGAGATGAGGGTCGCAGGGGCCCCCGGCCGC...CTCAGCTTTCACTATAGCAGTGCTTCCCAAACGGGTTCTAGACTTGGGTGTTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp CTGAATTGCACCTCTTCTCCAGGGCCTGGTGCCCTCAGAGGCCTGAGGGTCCTCGACAACAGGAAAGGCTaGTCAGTGGAGTCGCAAGAT +
Preference number: 4 (lower is better)
Translates to: LNCTSSPGPGALRGLRVLDNRKG*SVESQD
Trigger: ATCTTGCGACTCCACTGAGCAGCCTTTCCTGTTGTC...GAGGACCCTCAGGCCTCTGAGGGCACCAGGCCCTGGAGAAGAGGTGCAATTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp AGTACAGCATCTGCAAACTCGTGGCCCCTGCAGCCTCTCCAGATCACTGCCACCGAAGGAAGGGCCCTTTaGCCAACCCTCACCCATGTT +
Preference number: 4 (lower is better)
Translates to: STASANSWPLQPLQITATEGRAL*PTLTHV
Trigger: AACATGGGTGAGGGTTGGGCAAAGGGCCCTTCCTTC...GGTGGCAGTGATCTGGAGAGGCTGCAGGGGCCACGAGTTTGCAGATGCTGTACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp CTGAAGCCCTCGGAGGGGGTCTTAGCAAAGGCAAGGTTATTGCTGAAGTACAGCGCCTCCTCAGTAGGCTaGAGCTTGGCCCAGGCTCTG +
Preference number: 4 (lower is better)
Translates to: LKPSEGVLAKARLLLKYSASSVG*SLAQAL
Trigger: CAGAGCCTGGGCCAAGCTGCAGCCTACTGAGGAGGC...GCTGTACTTCAGCAATAACCTTGCCTTTGCTAAGACCCCCTCCGAGGGCTTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp CCTCCCACCTCCATTCCTAGTAATCAAGCCCCCACTCACACCCACCCAGAGCACATGTCGTCGCACGGCTaGTACATGCCAAGTGTCACG +
Preference number: 4 (lower is better)
Translates to: PPTSIPSNQAPTHTHPEHMSSHG*YMPSVT
Trigger: CGTGACACTTGGCATGTACCAGCCGTGCGACGACAT...GTGCTCTGGGTGGGTGTGAGTGGGGGCTTGATTACTAGGAATGGAGGTGGGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR CCA 90 bp CAGCACAGTGTCCAGGAACAGCCACAGCTCAGCGCCCATATGGGGGATAAAAGGGGACATTCCCCAGCATaGGCAGTGTGTCCAGGAGCA +
Preference number: 4 (lower is better)
Translates to: QHSVQEQPQLSAHMGDKRGHSPA*AVCPGA
Trigger: TGCTCCTGGACACACTGCCCATGCTGGGGAATGTCC...CCTTTTATCCCCCATATGGGCGCTGAGCTGTGGCTGTTCCTGGACACTGTGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp GTGTCCTGCCCGCCAGAGCACACAGCCTGGTGTGACGGGTCAGACAGTCACCCACTGTCCAGGCCTTCCTaGAGCTTATCAAACTCTTCT +
Preference number: 4 (lower is better)
Translates to: VSCPPEHTAWCDGSDSHPLSRPS*SLSNSS
Trigger: AGAAGAGTTTGATAAGCTCCAGGAAGGCCTGGACAG...TGGGTGACTGTCTGACCCGTCACACCAGGCTGTGTGCTCTGGCGGGCAGGACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR CCA 90 bp GGCCAGAATCCCAGAGCATCAGACAAAAGCCCCGTCCAGGCCCTGGCCCACCTCCTGTCCAGGCCTTCCTaGAGCTTATCAAACTCTTCT +
Preference number: 4 (lower is better)
Translates to: GQNPRASDKSPVQALAHLLSRPS*SLSNSS
Trigger: AGAAGAGTTTGATAAGCTCCAGGAAGGCCTGGACAG...GAGGTGGGCCAGGGCCTGGACGGGGCTTTTGTCTGATGCTCTGGGATTCTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp CTGAAGCCCTCGGAGGGGGTCTTAGCAAAGGCAAGGTTATTGCTGAAGTACAGCCACCCAGTGGGAGACTaGGGTCCAGGTGCCCATTGG +
Preference number: 4 (lower is better)
Translates to: LKPSEGVLAKARLLLKYSHPVGD*GPGAHW
Trigger: CCAATGGGCACCTGGACCCCAGTCTCCCACTGGGTG...GCTGTACTTCAGCAATAACCTTGCCTTTGCTAAGACCCCCTCCGAGGGCTTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp AGTACAGCATCTGCAAACTCGTGGCCCCTGCAGCCTCTCCAGATCACTGCCACCCGTCTTTGGCGATGCTaGGCATCCTGCCATTGCAGT +
Preference number: 4 (lower is better)
Translates to: STASANSWPLQPLQITATRLWRC*ASCHCS
Trigger: ACTGCAATGGCAGGATGCCCAGCATCGCCAAAGACG...GGTGGCAGTGATCTGGAGAGGCTGCAGGGGCCACGAGTTTGCAGATGCTGTACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp AGTACAGCATCTGCAAACTCGTGGCCCCTGCAGCCTCTCCAGATCACTGCCACCATGGCCAGGTCCAGCTaGTTCCATCGGTCCTTGAAG +
Preference number: 4 (lower is better)
Translates to: STASANSWPLQPLQITATMARSS*FHRSLK
Trigger: CTTCAAGGACCGATGGAACCAGCTGGACCTGGCCAT...GGTGGCAGTGATCTGGAGAGGCTGCAGGGGCCACGAGTTTGCAGATGCTGTACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp GGTCAGAGCTGCTTTGCCTTGAACCTACTGGGGCGGGGGCATAGTTGCTCAGGAATGGCCAGGTCCAGCTaGTTCCATCGGTCCTTGAAG +
Preference number: 4 (lower is better)
Translates to: GQSCFALNLLGRGHSCSGMARSS*FHRSLK
Trigger: CTTCAAGGACCGATGGAACCAGCTGGACCTGGCCAT...TCCTGAGCAACTATGCCCCCGCCCCAGTAGGTTCAAGGCAAAGCAGCTCTGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp GAATTCGGTCAGAGCTGCTTTGCCTTGAACCTACTGGGGCGGGGGCATAGTTGCCGAAGTTCTCGAAGGTaGCATGCCGGCTCATGCCCT +
Preference number: 4 (lower is better)
Translates to: EFGQSCFALNLLGRGHSCRSSRR*HAGSCP
Trigger: AGGGCATGAGCCGGCATGCCACCTTCGAGAACTTCG...GCAACTATGCCCCCGCCCCAGTAGGTTCAAGGCAAAGCAGCTCTGACCGAATTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp GAATTCGGTCAGAGCTGCTTTGCCTTGAACCTACTGGGGCGGGGGCATAGTTGCCGTCACCCAGCAGGATaGACGAGGACCTGTCTGAGT +
Preference number: 4 (lower is better)
Translates to: EFGQSCFALNLLGRGHSCRHPAG*TRTCLS
Trigger: ACTCAGACAGGTCCTCGTCCATCCTGCTGGGTGACG...GCAACTATGCCCCCGCCCCAGTAGGTTCAAGGCAAAGCAGCTCTGACCGAATTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp CTTGTCCTGGCCAGTGGATCACAGCTTCCCTGGTTCTCATCTCTGTCACCCACAACGCATGGGCTCAGGTaGGTCCAGCTCACCCTTGCT +
Preference number: 4 (lower is better)
Translates to: LVLASGSQLPWFSSLSPTTHGLR*VQLTLA
Trigger: AGCAAGGGTGAGCTGGACCCACCTGAGCCCATGCGT...TGTGGGTGACAGAGATGAGAACCAGGGAAGCTGTGATCCACTGGCCAGGACAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp GAATTCGGTCAGAGCTGCTTTGCCTTGAACCTACTGGGGCGGGGGCATAGTTGCACACAGGAAGTTCTCTaGATCCGGCGAGACGGCCGT +
Preference number: 4 (lower is better)
Translates to: EFGQSCFALNLLGRGHSCTQEVL*IRRDGR
Trigger: ACGGCCGTCTCGCCGGATCCAGAGAACTTCCTGTGT...GCAACTATGCCCCCGCCCCAGTAGGTTCAAGGCAAAGCAGCTCTGACCGAATTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp CAGCACAGTGTCCAGGAACAGCCACAGCTCAGCGCCCATATGGGGGATAAAAGGGCCAGTGCCCTTTTCTaGGCCTTTCTGGCTGGCAGA +
Preference number: 4 (lower is better)
Translates to: QHSVQEQPQLSAHMGDKRASALF*AFLAGR
Trigger: TCTGCCAGCCAGAAAGGCCCAGAAAAGGGCACTGGC...CCTTTTATCCCCCATATGGGCGCTGAGCTGTGGCTGTTCCTGGACACTGTGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp CAAACACCCAAGTCTAGAACCCGTTTGGGAAGCACTGCTATAGTGAAAGCTGAGCGGAGCTGCTGGGGCTaGCGTCCAGCGACGTGTCGC +
Preference number: 4 (lower is better)
Translates to: QTPKSRTRLGSTAIVKAERSCWG*RPATCR
Trigger: GCGACACGTCGCTGGACGCCAGCCCCAGCAGCTCCG...CTCAGCTTTCACTATAGCAGTGCTTCCCAAACGGGTTCTAGACTTGGGTGTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp GGTCAGAGCTGCTTTGCCTTGAACCTACTGGGGCGGGGGCATAGTTGCTCAGGAGCGCGATCCCAGGTGTaGACGAAGTATTGCTGTCTG +
Preference number: 4 (lower is better)
Translates to: GQSCFALNLLGRGHSCSGARSQV*TKYCCL
Trigger: CAGACAGCAATACTTCGTCCACACCTGGGATCGCGC...TCCTGAGCAACTATGCCCCCGCCCCAGTAGGTTCAAGGCAAAGCAGCTCTGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp TTGCAAAAAGTCAAGTCTGTCTGCTTCCCTCCAACTGCGAGAGCTCAGGGTCAGTGGGCCACGCAGGCCTaGCTAACCCAGACTCCGCTC +
Preference number: 4 (lower is better)
Translates to: LQKVKSVCFPPTARAQGQWATQA*LTQTPL
Trigger: GAGCGGAGTCTGGGTTAGCCAGGCCTGCGTGGCCCA...CTGACCCTGAGCTCTCGCAGTTGGAGGGAAGCAGACAGACTTGACTTTTTGCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp TTGCAAAAAGTCAAGTCTGTCTGCTTCCCTCCAACTGCGAGAGCTCAGGGTCAGGGTGACGCGAAAGGCTaGGCATGGGGATGCGGCTGG +
Preference number: 4 (lower is better)
Translates to: LQKVKSVCFPPTARAQGQGDAKG*AWGCGW
Trigger: CCAGCCGCATCCCCATGCCCAGCCTTTCGCGTCACC...CTGACCCTGAGCTCTCGCAGTTGGAGGGAAGCAGACAGACTTGACTTTTTGCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp CCACCCCTGCCTAGAATTCGGTCAGAGCTGCTTTGCCTTGAACCTACTGGGGCGACACAGCCCCTCTTCTaGGCTCCAATACACGTGTCC +
Preference number: 4 (lower is better)
Translates to: PPLPRIRSELLCLEPTGATQPLF*APIHVS
Trigger: GGACACGTGTATTGGAGCCCAGAAGAGGGGCTGTGT...CGCCCCAGTAGGTTCAAGGCAAAGCAGCTCTGACCGAATTCTAGGCAGGGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp AGTACAGCATCTGCAAACTCGTGGCCCCTGCAGCCTCTCCAGATCACTGCCACCGCCCAACCTTCCACATaGTATTCCCAGGCCACACAG +
Preference number: 4 (lower is better)
Translates to: STASANSWPLQPLQITATAQPST*YSQATQ
Trigger: CTGTGTGGCCTGGGAATACCATGTGGAAGGTTGGGC...GGTGGCAGTGATCTGGAGAGGCTGCAGGGGCCACGAGTTTGCAGATGCTGTACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp AAAGTCAAGTCTGTCTGCTTCCCTCCAACTGCGAGAGCTCAGGGTCAGCCAGGAACACTCCCTGCTCTGTaGACCCTGGAGCCTTCGCTC +
Preference number: 4 (lower is better)
Translates to: KVKSVCFPPTARAQGQPGTLPAL*TLEPSL
Trigger: GAGCGAAGGCTCCAGGGTCCACAGAGCAGGGAGTGT...TCCTGGCTGACCCTGAGCTCTCGCAGTTGGAGGGAAGCAGACAGACTTGACTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp AGTACAGCATCTGCAAACTCGTGGCCCCTGCAGCCTCTCCAGATCACTGCCACCAGGATTTGGCCAGACTaGGCCGTCTCTGCACAGATG +
Preference number: 4 (lower is better)
Translates to: STASANSWPLQPLQITATRIWPD*AVSAQM
Trigger: CATCTGTGCAGAGACGGCCCAGTCTGGCCAAATCCT...GGTGGCAGTGATCTGGAGAGGCTGCAGGGGCCACGAGTTTGCAGATGCTGTACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp AGTACAGCATCTGCAAACTCGTGGCCCCTGCAGCCTCTCCAGATCACTGCCACCGAGAGGAAGAGGATTTaGCCAGACTGGGCCGTCTCT +
Preference number: 4 (lower is better)
Translates to: STASANSWPLQPLQITATERKRI*PDWAVS
Trigger: AGAGACGGCCCAGTCTGGCCAAATCCTCTTCCTCTC...GGTGGCAGTGATCTGGAGAGGCTGCAGGGGCCACGAGTTTGCAGATGCTGTACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR TCA 90 bp CAGCACAGTGTCCAGGAACAGCCACAGCTCAGCGCCCATATGGGGGATAAAAGGTCTGGGTGTGGGACATaGGGATCAGCTCCATCCAGA +
Preference number: 4 (lower is better)
Translates to: QHSVQEQPQLSAHMGDKRSGCGT*GSAPSR
Trigger: TCTGGATGGAGCTGATCCTCATGTCCCACACCCAGA...CCTTTTATCCCCCATATGGGCGCTGAGCTGTGGCTGTTCCTGGACACTGTGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR TCA 90 bp CCACCCCTGCCTAGAATTCGGTCAGAGCTGCTTTGCCTTGAACCTACTGGGGCGGGATCACCAGCATGCTaGCACATTCAAACCACGGGT +
Preference number: 4 (lower is better)
Translates to: PPLPRIRSELLCLEPTGAGSPAC*HIQTTG
Trigger: ACCCGTGGTTTGAATGTGTCAGCATGCTGGTGATCC...CGCCCCAGTAGGTTCAAGGCAAAGCAGCTCTGACCGAATTCTAGGCAGGGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR TCA 90 bp GGTCAGAGCTGCTTTGCCTTGAACCTACTGGGGCGGGGGCATAGTTGCTCAGGAGACAGGTTGATGTTCTaGAGGTCCAGGGAGTACTCG +
Preference number: 4 (lower is better)
Translates to: GQSCFALNLLGRGHSCSGDRLMF*RSREYS
Trigger: CGAGTACTCCCTGGACCTTCAGAACATCAACCTGTC...TCCTGAGCAACTATGCCCCCGCCCCAGTAGGTTCAAGGCAAAGCAGCTCTGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR TCA 90 bp TGTCCTGGCCAGTGGATCACAGCTTCCCTGGTTCTCATCTCTGTCACCCACAGGGGATGGCTGACAGGTTaGTGTTCTGAAGGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: CPGQWITASLVLISVTHRGWLTG*CSEGPG
Trigger: CCCTGGACCTTCAGAACATCAACCTGTCAGCCATCC...CCTGTGGGTGACAGAGATGAGAACCAGGGAAGCTGTGATCCACTGGCCAGGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR TCA 90 bp CTGCCTCGAGGTGTCTGCTTGCAGAGTCACACGGTTCAGGGTAAGGGGAGGTTTCCGACAGGGAGCAGATaGAGGGCATCTCATCATCCT +
Preference number: 4 (lower is better)
Translates to: LPRGVCLQSHTVQGKGRFPTGSR*RASHHP
Trigger: AGGATGATGAGATGCCCTTCATCTGCTCCCTGTCGG...AAACCTCCCCTTACCCTGAACCGTGTGACTCTGCAAGCAGACACCTCGAGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR TCA 90 bp CTTGTCCTGGCCAGTGGATCACAGCTTCCCTGGTTCTCATCTCTGTCACCCACAGGTCGCCCATCTTGGTaGAGACGTCTTTGGCGATGC +
Preference number: 4 (lower is better)
Translates to: LVLASGSQLPWFSSLSPTGRPSW*RRLWRC
Trigger: GCATCGCCAAAGACGTCTTCACCAAGATGGGCGACC...TGTGGGTGACAGAGATGAGAACCAGGGAAGCTGTGATCCACTGGCCAGGACAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR TCA 90 bp CTGCCTCGAGGTGTCTGCTTGCAGAGTCACACGGTTCAGGGTAAGGGGAGGTTTGGTAGAACTTGCCCTTaGAGAGCTGCACTCCCAGGA +
Preference number: 4 (lower is better)
Translates to: LPRGVCLQSHTVQGKGRFGRTCP*RAALPG
Trigger: TCCTGGGAGTGCAGCTCTTCAAGGGCAAGTTCTACC...AAACCTCCCCTTACCCTGAACCGTGTGACTCTGCAAGCAGACACCTCGAGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR TCA 90 bp CAGCACAGTGTCCAGGAACAGCCACAGCTCAGCGCCCATATGGGGGATAAAAGGGGTAGAACTTGCCCTTaGAGAGCTGCACTCCCAGGA +
Preference number: 4 (lower is better)
Translates to: QHSVQEQPQLSAHMGDKRGRTCP*RAALPG
Trigger: TCCTGGGAGTGCAGCTCTTCAAGGGCAAGTTCTACC...CCTTTTATCCCCCATATGGGCGCTGAGCTGTGGCTGTTCCTGGACACTGTGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR TCA 90 bp CTGCCTCGAGGTGTCTGCTTGCAGAGTCACACGGTTCAGGGTAAGGGGAGGTTTTCTTGCTTGTCGTGGTaGCACTTCTTGCAGCCGGCA +
Preference number: 4 (lower is better)
Translates to: LPRGVCLQSHTVQGKGRFSCLSW*HFLQPA
Trigger: TGCCGGCTGCAAGAAGTGTCACCACGACAAGCAAGA...AAACCTCCCCTTACCCTGAACCGTGTGACTCTGCAAGCAGACACCTCGAGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR TCA 90 bp CTGCCTCGAGGTGTCTGCTTGCAGAGTCACACGGTTCAGGGTAAGGGGAGGTTTAGGACCGGACAGGGTTaGATGGGATCTCCTCCATCT +
Preference number: 4 (lower is better)
Translates to: LPRGVCLQSHTVQGKGRFRTGQG*MGSPPS
Trigger: AGATGGAGGAGATCCCATTCAACCCTGTCCGGTCCT...AAACCTCCCCTTACCCTGAACCGTGTGACTCTGCAAGCAGACACCTCGAGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR TCA 90 bp CTGCCTCGAGGTGTCTGCTTGCAGAGTCACACGGTTCAGGGTAAGGGGAGGTTTTCTGCTCCTGGCTCCTaGGGTAAAGAAGGTGAGACG +
Preference number: 4 (lower is better)
Translates to: LPRGVCLQSHTVQGKGRFSAPGS*GKEGET
Trigger: CGTCTCACCTTCTTTACCTCAGGAGCCAGGAGCAGA...AAACCTCCCCTTACCCTGAACCGTGTGACTCTGCAAGCAGACACCTCGAGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR TCA 90 bp GGTGTCTACGAAAGACTTCACAATAACGAGACAGTCAGGATGACAGGACAGACATTTCCCGGGTGGGCTTaGCAACCCCTCCCGGCCCCC +
Preference number: 4 (lower is better)
Translates to: GVYERLHNNETVRMTGQTFPGWA*QPLPAP
Trigger: GGGGGCCGGGAGGGGTTGTCAAGCCCACCCGGGAAA...TGTCTGTCCTGTCATCCTGACTGTCTCGTTATTGTGAAGTCTTTCGTAGACACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR TCA 90 bp CTGAATTGCACCTCTTCTCCAGGGCCTGGTGCCCTCAGAGGCCTGAGGGTCCTCCTGATCCTGTTAACTTaGAGCCCAACCTTCCACATG +
Preference number: 4 (lower is better)
Translates to: LNCTSSPGPGALRGLRVLLILLT*SPTFHM
Trigger: CATGTGGAAGGTTGGGCTTCAAGTTAACAGGATCAG...GAGGACCCTCAGGCCTCTGAGGGCACCAGGCCCTGGAGAAGAGGTGCAATTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR TCA 90 bp GCCATGGGCCAGCAGGTACCAGCGCCATCAGCAACTAGGAGGGAAGTTCATTCAAACCCTCACCCATGTTaGCTTGTCCTGGCCAGTGGA +
Preference number: 4 (lower is better)
Translates to: AMGQQVPAPSATRREVHSNPHPC*LVLASG
Trigger: TCCACTGGCCAGGACAAGTCAACATGGGTGAGGGTT...TGAATGAACTTCCCTCCTAGTTGCTGATGGCGCTGGTACCTGCTGGCCCATGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR TCA 90 bp CTTGTCCTGGCCAGTGGATCACAGCTTCCCTGGTTCTCATCTCTGTCACCCACACGGAAGGCTCTGAGCTaGGGATTTGGGGGAAGACAG +
Preference number: 4 (lower is better)
Translates to: LVLASGSQLPWFSSLSPTRKALS*GFGGRQ
Trigger: CTGTCTTCCCCCAAATCCTCAGCTCAGAGCCTTCCG...TGTGGGTGACAGAGATGAGAACCAGGGAAGCTGTGATCCACTGGCCAGGACAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp CAACTAGGAGGGAAGTTCATTCACACCATAGAAACTGTACAGCGACTGAGAGTGCTCCGGGGTCCGGGCTaGTCCGTGGTGACTCCTGGC +
Preference number: 4 (lower is better)
Translates to: QLGGKFIHTIETVQRLRVLRGPG*SVVTPG
Trigger: GCCAGGAGTCACCACGGAGCAGCCCGGACCCCGGAG...CACTCTCAGTCGCTGTACAGTTTCTATGGTGTGAATGAACTTCCCTCCTAGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp CGGGTCAGACAGTCACCCAGTGAATCAACTGCACTCACTGTGGGAGCCGGCCCGGTACTCGACCATCCCTaGCATGACGATGAAGAAATC +
Preference number: 4 (lower is better)
Translates to: RVRQSPSESTALTVGAGPVLDHP*HDDEEI
Trigger: GATTTCTTCATCGTCATGGCAGGGATGGTCGAGTAC...CGGGCCGGCTCCCACAGTGAGTGCAGTTGATTCACTGGGTGACTGTCTGACCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR GCA 90 bp AAAGTCAAGTCTGTCTGCTTCCCTCCAACTGCGAGAGCTCAGGGTCAGCCAGGAAGGCCCGCCCAGAGCTaGACACCTATGATGCCAAAG +
Preference number: 4 (lower is better)
Translates to: KVKSVCFPPTARAQGQPGRPAQS*TPMMPK
Trigger: CTTTGGCATCATAGGTGTGCAGCTCTGGGCGGGCCT...TCCTGGCTGACCCTGAGCTCTCGCAGTTGGAGGGAAGCAGACAGACTTGACTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp CTTGTCCTGGCCAGTGGATCACAGCTTCCCTGGTTCTCATCTCTGTCACCCACAGGTTGGCGCTGCCCGTaGGGCACACATTGTAGTAAC +
Preference number: 4 (lower is better)
Translates to: LVLASGSQLPWFSSLSPTGWRCP*GTHCSN
Trigger: GTTACTACAATGTGTGCCGCACGGGCAGCGCCAACC...TGTGGGTGACAGAGATGAGAACCAGGGAAGCTGTGATCCACTGGCCAGGACAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp CTGAAGCCCTCGGAGGGGGTCTTAGCAAAGGCAAGGTTATTGCTGAAGTACAGCAGCCGGTGCTCCCGTTaGTTGGTCTCCGAGAACTGG +
Preference number: 4 (lower is better)
Translates to: LKPSEGVLAKARLLLKYSSRCSR*LVSENW
Trigger: CCAGTTCTCGGAGACCAAGCAACGGGAGCACCGGCT...GCTGTACTTCAGCAATAACCTTGCCTTTGCTAAGACCCCCTCCGAGGGCTTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp CAGCAACTAGGAGGGAAGTTCATTCACACCATAGAAACTGTACAGCGACTGAGAAGGCTCCGTCCTCGCTaGTCCGGGCCCCGTCCCCAT +
Preference number: 4 (lower is better)
Translates to: QQLGGKFIHTIETVQRLRRLRPR*SGPRPH
Trigger: ATGGGGACGGGGCCCGGAGCAGCGAGGACGGAGCCT...TCTCAGTCGCTGTACAGTTTCTATGGTGTGAATGAACTTCCCTCCTAGTTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp GGTCAGAGCTGCTTTGCCTTGAACCTACTGGGGCGGGGGCATAGTTGCTCAGGATTGCCCTTGAAGAGCTaGACTCCCAGGATGCCAAAG +
Preference number: 4 (lower is better)
Translates to: GQSCFALNLLGRGHSCSGLPLKS*TPRMPK
Trigger: CTTTGGCATCCTGGGAGTGCAGCTCTTCAAGGGCAA...TCCTGAGCAACTATGCCCCCGCCCCAGTAGGTTCAAGGCAAAGCAGCTCTGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp TGTCCTGGCCAGTGGATCACAGCTTCCCTGGTTCTCATCTCTGTCACCCACAGGTTGATGAGCACGAACTaGGCGGTGAGCACGAAGCTC +
Preference number: 4 (lower is better)
Translates to: CPGQWITASLVLISVTHRLMSTN*AVSTKL
Trigger: GAGCTTCGTGCTCACCGCGCAGTTCGTGCTCATCAA...CCTGTGGGTGACAGAGATGAGAACCAGGGAAGCTGTGATCCACTGGCCAGGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp GGTCAGAGCTGCTTTGCCTTGAACCTACTGGGGCGGGGGCATAGTTGCTCAGGATTGGGGGTGCTTGACTaGTGTCATGTTTCAGCCAGG +
Preference number: 4 (lower is better)
Translates to: GQSCFALNLLGRGHSCSGLGVLD*CHVSAR
Trigger: CCTGGCTGAAACATGACAGCAGTCAAGCACCCCCAA...TCCTGAGCAACTATGCCCCCGCCCCAGTAGGTTCAAGGCAAAGCAGCTCTGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp TATATATATATGTATGTATATGCACTGGAAGGGCCACCATGGGCCACGCAGGCCTCCTCGAGCGTGGTCTaGAGGCTGCCCGCGGAGCTG +
Preference number: 4 (lower is better)
Translates to: YIYMYVYALEGPPWATQASSSVV*RLPAEL
Trigger: CAGCTCCGCGGGCAGCCTGCAGACCACGCTCGAGGA...GGCCTGCGTGGCCCATGGTGGCCCTTCCAGTGCATATACATACATATATATATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp CAAACACCCAAGTCTAGAACCCGTTTGGGAAGCACTGCTATAGTGAAAGCTGAGTGGTGGAGCCCCCGCTaGTGTGGCTGCGCTGATGCG +
Preference number: 4 (lower is better)
Translates to: QTPKSRTRLGSTAIVKAEWWSPR*CGCADA
Trigger: CGCATCAGCGCAGCCACAGCAGCGGGGGCTCCACCA...CTCAGCTTTCACTATAGCAGTGCTTCCCAAACGGGTTCTAGACTTGGGTGTTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp CAAACACCCAAGTCTAGAACCCGTTTGGGAAGCACTGCTATAGTGAAAGCTGAGTGGAGTCGTGGTGGGTaGAGCCCGGGCTGGTGGAGC +
Preference number: 4 (lower is better)
Translates to: QTPKSRTRLGSTAIVKAEWSRGG*SPGWWS
Trigger: GCTCCACCAGCCCGGGCTGCACCCACCACGACTCCA...CTCAGCTTTCACTATAGCAGTGCTTCCCAAACGGGTTCTAGACTTGGGTGTTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp GGGGACAGCACAGTGTCCAGGAACAGCCACAGCTCAGCGCCCATATGGGGGATACTAAGGGGATGTGTGTaGTCTGGGGTGTCTACGAAA +
Preference number: 4 (lower is better)
Translates to: GDSTVSRNSHSSAPIWGILRGCV*SGVSTK
Trigger: TTTCGTAGACACCCCAGAGCACACACATCCCCTTAG...TATCCCCCATATGGGCGCTGAGCTGTGGCTGTTCCTGGACACTGTGCTGTCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp CAGCACAGTGTCCAGGAACAGCCACAGCTCAGCGCCCATATGGGGGATAAAAGGGCCTCTCCAGATCACTaGCACCAACATGCTCCCAAC +
Preference number: 4 (lower is better)
Translates to: QHSVQEQPQLSAHMGDKRASPDH*HQHAPN
Trigger: GTTGGGAGCATGTTGGTGGCAGTGATCTGGAGAGGC...CCTTTTATCCCCCATATGGGCGCTGAGCTGTGGCTGTTCCTGGACACTGTGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp CCACCCCTGCCTAGAATTCGGTCAGAGCTGCTTTGCCTTGAACCTACTGGGGCGTCATGCCCATCCCTTTaGCTAGAACACCTGCCTCGA +
Preference number: 4 (lower is better)
Translates to: PPLPRIRSELLCLEPTGASCPSL*LEHLPR
Trigger: TCGAGGCAGGTGTTCTAGGCAAAGGGATGGGCATGA...CGCCCCAGTAGGTTCAAGGCAAAGCAGCTCTGACCGAATTCTAGGCAGGGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp CTTGTCCTGGCCAGTGGATCACAGCTTCCCTGGTTCTCATCTCTGTCACCCACATCTCCCAGTGCTCCCTaGAAGGAGCTTCTCTGCCTC +
Preference number: 4 (lower is better)
Translates to: LVLASGSQLPWFSSLSPTSPSAP*KELLCL
Trigger: GAGGCAGAGAAGCTCCTTGCAGGGAGCACTGGGAGA...TGTGGGTGACAGAGATGAGAACCAGGGAAGCTGTGATCCACTGGCCAGGACAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp TTGCAAAAAGTCAAGTCTGTCTGCTTCCCTCCAACTGCGAGAGCTCAGGGTCAGGGGGAGGCAGGCCCATaGAAAGTCTGGCAATGCCGG +
Preference number: 4 (lower is better)
Translates to: LQKVKSVCFPPTARAQGQGEAGP*KVWQCR
Trigger: CCGGCATTGCCAGACTTTGCATGGGCCTGCCTCCCC...CTGACCCTGAGCTCTCGCAGTTGGAGGGAAGCAGACAGACTTGACTTTTTGCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000402142.4
CDS-3UTR CCA 90 bp CTGAAGCCCTCGGAGGGGGTCTTAGCAAAGGCAAGGTTATTGCTGAAGTACAGCCGTAGACGTCGTCCTTaGACAGGCAGCACTCACGGC +
Preference number: 4 (lower is better)
Translates to: LKPSEGVLAKARLLLKYSRRRRP*TGSTHG
Trigger: GCCGTGAGTGCTGCCTGTCCAAGGACGACGTCTACG...GCTGTACTTCAGCAATAACCTTGCCTTTGCTAAGACCCCCTCCGAGGGCTTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp CCAGTGAATCAACTGCACTCACTGTGGGAGCCGGCCCGGCCCCATTTCCCCACCTCCAGAGTGATCACCTaGAAGATGACAATCCAAGCA +
Preference number: 4 (lower is better)
Translates to: PVNQLHSLWEPARPHFPTSRVIT*KMTIQA
Trigger: TGCTTGGATTGTCATCTTCCAGGTGATCACTCTGGA...GGTGGGGAAATGGGGCCGGGCCGGCTCCCACAGTGAGTGCAGTTGATTCACTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR CCA 90 bp GGTGTCTACGAAAGACTTCACAATAACGAGACAGTCAGGATGACAGGACAGACACCAGGGCGCGGCGCTTaGCCTTGCGCAGGATGTGGC +
Preference number: 4 (lower is better)
Translates to: GVYERLHNNETVRMTGQTPGRGA*PCAGCG
Trigger: GCCACATCCTGCGCAAGGCCAAGCGCCGCGCCCTGG...TGTCTGTCCTGTCATCCTGACTGTCTCGTTATTGTGAAGTCTTTCGTAGACACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp GGTGTCTACGAAAGACTTCACAATAACGAGACAGTCAGGATGACAGGACAGACAGGCTGCACCAGGGTGTaGGGCGTCGCATCCAGGGGG +
Preference number: 4 (lower is better)
Translates to: GVYERLHNNETVRMTGQTGCTRV*GVASRG
Trigger: CCCCCTGGATGCGACGCCCCACACCCTGGTGCAGCC...TGTCTGTCCTGTCATCCTGACTGTCTCGTTATTGTGAAGTCTTTCGTAGACACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp CCAGTGAATCAACTGCACTCACTGTGGGAGCCGGCCCGGCCCCATTTCCCCACCCAAACTCTTCTATGTTaGATGAGCTCTGGTCCTCGT +
Preference number: 4 (lower is better)
Translates to: PVNQLHSLWEPARPHFPTQTLLC*MSSGPR
Trigger: ACGAGGACCAGAGCTCATCCAACATAGAAGAGTTTG...GGTGGGGAAATGGGGCCGGGCCGGCTCCCACAGTGAGTGCAGTTGATTCACTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR CCA 90 bp CTGAAGCCCTCGGAGGGGGTCTTAGCAAAGGCAAGGTTATTGCTGAAGTACAGCGGGGGTCATGGGGATTaGGCAGAGCTTGGGATCTCC +
Preference number: 4 (lower is better)
Translates to: LKPSEGVLAKARLLLKYSGGHGD*AELGIS
Trigger: GGAGATCCCAAGCTCTGCCCAATCCCCATGACCCCC...GCTGTACTTCAGCAATAACCTTGCCTTTGCTAAGACCCCCTCCGAGGGCTTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp TGTCCTGGCCAGTGGATCACAGCTTCCCTGGTTCTCATCTCTGTCACCCACAGGTTGGTCACAGGCTGCTaGTCCACAGCAACAGCATCC +
Preference number: 4 (lower is better)
Translates to: CPGQWITASLVLISVTHRLVTGC*STATAS
Trigger: GGATGCTGTTGCTGTGGACCAGCAGCCTGTGACCAA...CCTGTGGGTGACAGAGATGAGAACCAGGGAAGCTGTGATCCACTGGCCAGGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp GAATTCGGTCAGAGCTGCTTTGCCTTGAACCTACTGGGGCGGGGGCATAGTTGCGGGTGTGACAATAGGTaGCATAGTAGGGCAGCCGCT +
Preference number: 4 (lower is better)
Translates to: EFGQSCFALNLLGRGHSCGCDNR*HSRAAA
Trigger: AGCGGCTGCCCTACTATGCCACCTATTGTCACACCC...GCAACTATGCCCCCGCCCCAGTAGGTTCAAGGCAAAGCAGCTCTGACCGAATTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp CTTGTCCTGGCCAGTGGATCACAGCTTCCCTGGTTCTCATCTCTGTCACCCACACGTCACCCAGCAGGATaGACGAGGACCTGTCTGAGT +
Preference number: 4 (lower is better)
Translates to: LVLASGSQLPWFSSLSPTRHPAG*TRTCLS
Trigger: ACTCAGACAGGTCCTCGTCCATCCTGCTGGGTGACG...TGTGGGTGACAGAGATGAGAACCAGGGAAGCTGTGATCCACTGGCCAGGACAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp CTTGTCCTGGCCAGTGGATCACAGCTTCCCTGGTTCTCATCTCTGTCACCCACAACACAGGAAGTTCTCTaGATCCGGCGAGACGGCCGT +
Preference number: 4 (lower is better)
Translates to: LVLASGSQLPWFSSLSPTTQEVL*IRRDGR
Trigger: ACGGCCGTCTCGCCGGATCCAGAGAACTTCCTGTGT...TGTGGGTGACAGAGATGAGAACCAGGGAAGCTGTGATCCACTGGCCAGGACAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp TGGACCCTGGAGCCTTCGCTCATGCCCATCCCTTTGCCTAGAACACCTGCCTCGGAGACATCTAACCGGTaGACTAAGGGGATGTGTGTG +
Preference number: 4 (lower is better)
Translates to: WTLEPSLMPIPLPRTPASETSNR*TKGMCV
Trigger: CACACACATCCCCTTAGTCCACCGGTTAGATGTCTC...CGAGGCAGGTGTTCTAGGCAAAGGGATGGGCATGAGCGAAGGCTCCAGGGTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp CAAACACCCAAGTCTAGAACCCGTTTGGGAAGCACTGCTATAGTGAAAGCTGAGCACCTGCAGGGCAGCTaGAGCCAGCCGAGACCAGGC +
Preference number: 4 (lower is better)
Translates to: QTPKSRTRLGSTAIVKAEHLQGS*SQPRPG
Trigger: GCCTGGTCTCGGCTGGCTCCAGCTGCCCTGCAGGTG...CTCAGCTTTCACTATAGCAGTGCTTCCCAAACGGGTTCTAGACTTGGGTGTTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR TCA 90 bp CTTGTCCTGGCCAGTGGATCACAGCTTCCCTGGTTCTCATCTCTGTCACCCACAAGTAACGGTTCCAGTTaGCACAGAGGCCGCTGGCAT +
Preference number: 4 (lower is better)
Translates to: LVLASGSQLPWFSSLSPTSNGSS*HRGRWH
Trigger: ATGCCAGCGGCCTCTGTGTCAACTGGAACCGTTACT...TGTGGGTGACAGAGATGAGAACCAGGGAAGCTGTGATCCACTGGCCAGGACAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR TCA 90 bp AGTTTGTGTCCTGCCCGCCAGAGCACACAGCCTGGTGTGACGGGTCAGACAGTCACACCACGATGTCGATaGTGGACACGAAGACAAGAA +
Preference number: 4 (lower is better)
Translates to: SLCPARQSTQPGVTGQTVTPRCR*WTRRQE
Trigger: TTCTTGTCTTCGTGTCCATCATCGACATCGTGGTGT...GACTGTCTGACCCGTCACACCAGGCTGTGTGCTCTGGCGGGCAGGACACAAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR TCA 90 bp CTGAAGCCCTCGGAGGGGGTCTTAGCAAAGGCAAGGTTATTGCTGAAGTACAGCCGGAAGGCTCTGAGCTaGGGATTTGGGGGAAGACAG +
Preference number: 4 (lower is better)
Translates to: LKPSEGVLAKARLLLKYSRKALS*GFGGRQ
Trigger: CTGTCTTCCCCCAAATCCTCAGCTCAGAGCCTTCCG...GCTGTACTTCAGCAATAACCTTGCCTTTGCTAAGACCCCCTCCGAGGGCTTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp TGGACCCTGGAGCCTTCGCTCATGCCCATCCCTTTGCCTAGAACACCTGCCTCGGTACTCGACCATCCCTaGCATGACGATGAAGAAATC +
Preference number: 4 (lower is better)
Translates to: WTLEPSLMPIPLPRTPASVLDHP*HDDEEI
Trigger: GATTTCTTCATCGTCATGGCAGGGATGGTCGAGTAC...CGAGGCAGGTGTTCTAGGCAAAGGGATGGGCATGAGCGAAGGCTCCAGGGTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp CCACCCCTGCCTAGAATTCGGTCAGAGCTGCTTTGCCTTGAACCTACTGGGGCGGTCGAAGAGCCCAAATaGAGCCAGCTTCAGGATCAT +
Preference number: 4 (lower is better)
Translates to: PPLPRIRSELLCLEPTGAVEEPK*SQLQDH
Trigger: ATGATCCTGAAGCTGGCTGCATTTGGGCTCTTCGAC...CGCCCCAGTAGGTTCAAGGCAAAGCAGCTCTGACCGAATTCTAGGCAGGGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp AGTACAGCATCTGCAAACTCGTGGCCCCTGCAGCCTCTCCAGATCACTGCCACCCCAACCATCCTTGGATaGCAGGACAAAGAGGGACAT +
Preference number: 4 (lower is better)
Translates to: STASANSWPLQPLQITATPTILG*QDKEGH
Trigger: ATGTCCCTCTTTGTCCTGGCATCCAAGGATGGTTGG...GGTGGCAGTGATCTGGAGAGGCTGCAGGGGCCACGAGTTTGCAGATGCTGTACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp CTTGTCCTGGCCAGTGGATCACAGCTTCCCTGGTTCTCATCTCTGTCACCCACATGGTTGGTCACAGGCTaGTGGTCCACAGCAACAGCA +
Preference number: 4 (lower is better)
Translates to: LVLASGSQLPWFSSLSPTWLVTG*WSTATA
Trigger: TGCTGTTGCTGTGGACCAGCAGCCTGTGACCAACCA...TGTGGGTGACAGAGATGAGAACCAGGGAAGCTGTGATCCACTGGCCAGGACAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp TTGCAAAAAGTCAAGTCTGTCTGCTTCCCTCCAACTGCGAGAGCTCAGGGTCAGGGTCCAGCTCACCCTTaGTGTCTTTGCGGCCAGGTG +
Preference number: 4 (lower is better)
Translates to: LQKVKSVCFPPTARAQGQGPAHP*CLCGQV
Trigger: CACCTGGCCGCAAAGACAGCAAGGGTGAGCTGGACC...CTGACCCTGAGCTCTCGCAGTTGGAGGGAAGCAGACAGACTTGACTTTTTGCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp CAGCACAGTGTCCAGGAACAGCCACAGCTCAGCGCCCATATGGGGGATAAAAGGTTGGGGGTGCTTGACTaGTGTCATGTTTCAGCCAGG +
Preference number: 4 (lower is better)
Translates to: QHSVQEQPQLSAHMGDKRLGVLD*CHVSAR
Trigger: CCTGGCTGAAACATGACAGCAGTCAAGCACCCCCAA...CCTTTTATCCCCCATATGGGCGCTGAGCTGTGGCTGTTCCTGGACACTGTGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp TTGCAAAAAGTCAAGTCTGTCTGCTTCCCTCCAACTGCGAGAGCTCAGGGTCAGCTGGCTGGCAGACACTaGAGGGTGGAAGAACTCGGC +
Preference number: 4 (lower is better)
Translates to: LQKVKSVCFPPTARAQGQLAGRH*RVEELG
Trigger: GCCGAGTTCTTCCACCCTGCAGTGTCTGCCAGCCAG...CTGACCCTGAGCTCTCGCAGTTGGAGGGAAGCAGACAGACTTGACTTTTTGCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp CTGAAGCCCTCGGAGGGGGTCTTAGCAAAGGCAAGGTTATTGCTGAAGTACAGCCGGTCAGAGCTGCTTTaGCTTGAACCTACTGGGGCG +
Preference number: 4 (lower is better)
Translates to: LKPSEGVLAKARLLLKYSRSELL*LEPTGA
Trigger: CGCCCCAGTAGGTTCAAGGCAAAGCAGCTCTGACCG...GCTGTACTTCAGCAATAACCTTGCCTTTGCTAAGACCCCCTCCGAGGGCTTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp CTTGTCCTGGCCAGTGGATCACAGCTTCCCTGGTTCTCATCTCTGTCACCCACACTCGAGGTGTCTGCTTaGAGAGTCACACGGTTCAGG +
Preference number: 4 (lower is better)
Translates to: LVLASGSQLPWFSSLSPTLEVSA*RVTRFR
Trigger: CCTGAACCGTGTGACTCTGCAAGCAGACACCTCGAG...TGTGGGTGACAGAGATGAGAACCAGGGAAGCTGTGATCCACTGGCCAGGACAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp AAAGTCAAGTCTGTCTGCTTCCCTCCAACTGCGAGAGCTCAGGGTCAGCCAGGACTGCCTCGAGGTGTCTaGTTGCAGAGTCACACGGTT +
Preference number: 4 (lower is better)
Translates to: KVKSVCFPPTARAQGQPGLPRGV*LQSHTV
Trigger: AACCGTGTGACTCTGCAAGCAGACACCTCGAGGCAG...TCCTGGCTGACCCTGAGCTCTCGCAGTTGGAGGGAAGCAGACAGACTTGACTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp CTGAAGCCCTCGGAGGGGGTCTTAGCAAAGGCAAGGTTATTGCTGAAGTACAGCAGGAACAAGGTCAAGTaGCTGGGATCGGCAGGTGGG +
Preference number: 4 (lower is better)
Translates to: LKPSEGVLAKARLLLKYSRNKVK*LGSAGG
Trigger: CCCACCTGCCGATCCCAGGCACTTGACCTTGTTCCT...GCTGTACTTCAGCAATAACCTTGCCTTTGCTAAGACCCCCTCCGAGGGCTTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp GAATTCGGTCAGAGCTGCTTTGCCTTGAACCTACTGGGGCGGGGGCATAGTTGCAACACTGGTGGTGGCTaGCGCTTGGTTTCTCTACAC +
Preference number: 4 (lower is better)
Translates to: EFGQSCFALNLLGRGHSCNTGGG*RLVSLH
Trigger: GTGTAGAGAAACCAAGCGGCAGCCACCACCAGTGTT...GCAACTATGCCCCCGCCCCAGTAGGTTCAAGGCAAAGCAGCTCTGACCGAATTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp AAAGTCAAGTCTGTCTGCTTCCCTCCAACTGCGAGAGCTCAGGGTCAGCCAGGAAATAGGCGCCAGGTCTaGGTGTGGGACATGAGGATC +
Preference number: 4 (lower is better)
Translates to: KVKSVCFPPTARAQGQPGNRRQV*VWDMRI
Trigger: GATCCTCATGTCCCACACCCAGACCTGGCGCCTATT...TCCTGGCTGACCCTGAGCTCTCGCAGTTGGAGGGAAGCAGACAGACTTGACTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp CAGCAACTAGGAGGGAAGTTCATTCACACCATAGAAACTGTACAGCGACTGAGACACCCTTGTGGGGGTTaGCGCTGCCCGTGCGGCACA +
Preference number: 4 (lower is better)
Translates to: QQLGGKFIHTIETVQRLRHPCGG*RCPCGT
Trigger: TGTGCCGCACGGGCAGCGCCAACCCCCACAAGGGTG...TCTCAGTCGCTGTACAGTTTCTATGGTGTGAATGAACTTCCCTCCTAGTTGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp CAGCACAGTGTCCAGGAACAGCCACAGCTCAGCGCCCATATGGGGGATAAAAGGTTGGTCTCCGAGAACTaGGTCGCTATGACAACGAGG +
Preference number: 4 (lower is better)
Translates to: QHSVQEQPQLSAHMGDKRLVSEN*VAMTTR
Trigger: CCTCGTTGTCATAGCGACCCAGTTCTCGGAGACCAA...CCTTTTATCCCCCATATGGGCGCTGAGCTGTGGCTGTTCCTGGACACTGTGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp TATATATATATGTATGTATATGCACTGGAAGGGCCACCATGGGCCACGCAGGCCCAGGCTCGGCGTAGCTaGCCACCGTGCTGGAGGACA +
Preference number: 4 (lower is better)
Translates to: YIYMYVYALEGPPWATQAQARRS*PPCWRT
Trigger: TGTCCTCCAGCACGGTGGCCAGCTACGCCGAGCCTG...GGCCTGCGTGGCCCATGGTGGCCCTTCCAGTGCATATACATACATATATATATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp TGTCCTGGCCAGTGGATCACAGCTTCCCTGGTTCTCATCTCTGTCACCCACAGGGCCTTGCGCAGGATGTaGCAGACATACTGGAAGATC +
Preference number: 4 (lower is better)
Translates to: CPGQWITASLVLISVTHRALRRM*QTYWKI
Trigger: GATCTTCCAGTATGTCTGCCACATCCTGCGCAAGGC...CCTGTGGGTGACAGAGATGAGAACCAGGGAAGCTGTGATCCACTGGCCAGGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp TATATATATATGTATGTATATGCACTGGAAGGGCCACCATGGGCCACGCAGGCCAATGTGGTGGGCGTGTaGGGTGTGCAGGGGTGCGGC +
Preference number: 4 (lower is better)
Translates to: YIYMYVYALEGPPWATQANVVGV*GVQGCG
Trigger: GCCGCACCCCTGCACACCCCACACGCCCACCACATT...GGCCTGCGTGGCCCATGGTGGCCCTTCCAGTGCATATACATACATATATATATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp CTTGTCCTGGCCAGTGGATCACAGCTTCCCTGGTTCTCATCTCTGTCACCCACACTGTCTCCAGGGACGTaGGCTGATTGTAGTGCTCCA +
Preference number: 4 (lower is better)
Translates to: LVLASGSQLPWFSSLSPTLSPGT*ADCSAP
Trigger: TGGAGCACTACAATCAGCCCACGTCCCTGGAGACAG...TGTGGGTGACAGAGATGAGAACCAGGGAAGCTGTGATCCACTGGCCAGGACAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp CAGCAACTAGGAGGGAAGTTCATTCACACCATAGAAACTGTACAGCGACTGAGACAGCTGCGCTCGTCGTaGGTGCAGTCCCGCAGCGTG +
Preference number: 4 (lower is better)
Translates to: QQLGGKFIHTIETVQRLRQLRSS*VQSRSV
Trigger: CACGCTGCGGGACTGCACCCACGACGAGCGCAGCTG...TCTCAGTCGCTGTACAGTTTCTATGGTGTGAATGAACTTCCCTCCTAGTTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp GGTGTCTACGAAAGACTTCACAATAACGAGACAGTCAGGATGACAGGACAGACACACCTGCAGGGCAGCTaGAGCCAGCCGAGACCAGGC +
Preference number: 4 (lower is better)
Translates to: GVYERLHNNETVRMTGQTHLQGS*SQPRPG
Trigger: GCCTGGTCTCGGCTGGCTCCAGCTGCCCTGCAGGTG...TGTCTGTCCTGTCATCCTGACTGTCTCGTTATTGTGAAGTCTTTCGTAGACACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp CAAACACCCAAGTCTAGAACCCGTTTGGGAAGCACTGCTATAGTGAAAGCTGAGGCGAAAGGCTGGGCATaGGGATGCGGCTGGACCCAG +
Preference number: 4 (lower is better)
Translates to: QTPKSRTRLGSTAIVKAEAKGWA*GCGWTQ
Trigger: CTGGGTCCAGCCGCATCCCCATGCCCAGCCTTTCGC...CTCAGCTTTCACTATAGCAGTGCTTCCCAAACGGGTTCTAGACTTGGGTGTTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp CAAACACCCAAGTCTAGAACCCGTTTGGGAAGCACTGCTATAGTGAAAGCTGAGGGTGACGCGAAAGGCTaGGCATGGGGATGCGGCTGG +
Preference number: 4 (lower is better)
Translates to: QTPKSRTRLGSTAIVKAEGDAKG*AWGCGW
Trigger: CCAGCCGCATCCCCATGCCCAGCCTTTCGCGTCACC...CTCAGCTTTCACTATAGCAGTGCTTCCCAAACGGGTTCTAGACTTGGGTGTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp TGTCCTGGCCAGTGGATCACAGCTTCCCTGGTTCTCATCTCTGTCACCCACAGGGGATCACAGCTTCCCTaGTTCTCATCTCTGTCACCC +
Preference number: 4 (lower is better)
Translates to: CPGQWITASLVLISVTHRGSQLP*FSSLSP
Trigger: GGGTGACAGAGATGAGAACCAGGGAAGCTGTGATCC...CCTGTGGGTGACAGAGATGAGAACCAGGGAAGCTGTGATCCACTGGCCAGGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp AAAGTCAAGTCTGTCTGCTTCCCTCCAACTGCGAGAGCTCAGGGTCAGCCAGGAGAGAGGAAGAGGATTTaGCCAGACTGGGCCGTCTCT +
Preference number: 4 (lower is better)
Translates to: KVKSVCFPPTARAQGQPGERKRI*PDWAVS
Trigger: AGAGACGGCCCAGTCTGGCCAAATCCTCTTCCTCTC...TCCTGGCTGACCCTGAGCTCTCGCAGTTGGAGGGAAGCAGACAGACTTGACTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR CAA 72 bp TCCCTTTGCCTAGAACACCTGCCTCGAGGTGTCTGCTaGCAGAGTCACACGGTTCAGGGTAAGGGGAGGTTT +
Preference number: 4 (lower is better)
Translates to: SLCLEHLPRGVC*QSHTVQGKGRF
Trigger: AAACCTCCCCTTACCCTGAACCGTGTGACTCTGCAAGCAGACACCTCGAGGCAGGTGTTCTAGGCAAAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR CAA 72 bp GATTTGGGGGAAGACAGCAGACGGGCTTTACACACTTaGTCCTCCTTTAAGGGGCTGCCTGGTGCCGGAGAA +
Preference number: 4 (lower is better)
Translates to: DLGEDSRRALHT*SSFKGLPGAGE
Trigger: TTCTCCGGCACCAGGCAGCCCCTTAAAGGAGGACAAAGTGTGTAAAGCCCGTCTGCTGTCTTCCCCCAAATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR CAA 72 bp GCTTTTATTCAAAACAACACTGGTGGTGGCTGCCGCTaGGTTTCTCTACACCCGGGCCATGGGCCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: AFIQNNTGGGCR*VSLHPGHGPAG
Trigger: ACCTGCTGGCCCATGGCCCGGGTGTAGAGAAACCAAGCGGCAGCCACCACCAGTGTTGTTTTGAATAAAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR TCA 90 bp AAAGTCAAGTCTGTCTGCTTCCCTCCAACTGCGAGAGCTCAGGGTCAGCCAGGAGGATCACCAGCATGCTaGCACATTCAAACCACGGGT +
Preference number: 4 (lower is better)
Translates to: KVKSVCFPPTARAQGQPGGSPAC*HIQTTG
Trigger: ACCCGTGGTTTGAATGTGTCAGCATGCTGGTGATCC...TCCTGGCTGACCCTGAGCTCTCGCAGTTGGAGGGAAGCAGACAGACTTGACTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR TCA 90 bp CTGAAGCCCTCGGAGGGGGTCTTAGCAAAGGCAAGGTTATTGCTGAAGTACAGCCACGGTGCGGATGGCTaGCAGGTTGATGTTCTGAAG +
Preference number: 4 (lower is better)
Translates to: LKPSEGVLAKARLLLKYSHGADG*QVDVLK
Trigger: CTTCAGAACATCAACCTGTCAGCCATCCGCACCGTG...GCTGTACTTCAGCAATAACCTTGCCTTTGCTAAGACCCCCTCCGAGGGCTTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR TCA 90 bp TGTCCTGGCCAGTGGATCACAGCTTCCCTGGTTCTCATCTCTGTCACCCACAGGTGTCCGTGCGGAGGCTaGACTTGCAGCCAAAAATAT +
Preference number: 4 (lower is better)
Translates to: CPGQWITASLVLISVTHRCPCGG*TCSQKY
Trigger: ATATTTTTGGCTGCAAGTTCAGCCTCCGCACGGACA...CCTGTGGGTGACAGAGATGAGAACCAGGGAAGCTGTGATCCACTGGCCAGGACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR TCA 90 bp CAAACACCCAAGTCTAGAACCCGTTTGGGAAGCACTGCTATAGTGAAAGCTGAGTGGGCAGGGCCGCATTaGTCTCGATCTCCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: QTPKSRTRLGSTAIVKAEWAGPH*SRSPPG
Trigger: CCCTGGAGGAGATCGAGATCAATGCGGCCCTGCCCA...CTCAGCTTTCACTATAGCAGTGCTTCCCAAACGGGTTCTAGACTTGGGTGTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR TCA 90 bp TGTCCTGGCCAGTGGATCACAGCTTCCCTGGTTCTCATCTCTGTCACCCACAGGAACACACACACACCCTaGATTGCACCTCTTCTCCAG +
Preference number: 4 (lower is better)
Translates to: CPGQWITASLVLISVTHRNTHTP*IAPLLQ
Trigger: CTGGAGAAGAGGTGCAATTCAGGGTGTGTGTGTGTT...CCTGTGGGTGACAGAGATGAGAACCAGGGAAGCTGTGATCCACTGGCCAGGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR TCA 90 bp TGGACCCTGGAGCCTTCGCTCATGCCCATCCCTTTGCCTAGAACACCTGCCTCGAAAGGCATTAGTGGCTaGACAACTAACTACCTGAGC +
Preference number: 4 (lower is better)
Translates to: WTLEPSLMPIPLPRTPASKGISG*TTNYLS
Trigger: GCTCAGGTAGTTAGTTGTTCAGCCACTAATGCCTTT...CGAGGCAGGTGTTCTAGGCAAAGGGATGGGCATGAGCGAAGGCTCCAGGGTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp TTGCAAAAAGTCAAGTCTGTCTGCTTCCCTCCAACTGCGAGAGCTCAGGGTCAGAGACCTGCAGGATCTTaGAGCGGTCGGACAGGCAGT +
Preference number: 4 (lower is better)
Translates to: LQKVKSVCFPPTARAQGQRPAGS*SGRTGS
Trigger: ACTGCCTGTCCGACCGCTGCAAGATCCTGCAGGTCT...CTGACCCTGAGCTCTCGCAGTTGGAGGGAAGCAGACAGACTTGACTTTTTGCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp GCCATGGGCCAGCAGGTACCAGCGCCATCAGCAACTAGGAGGGAAGTTCATTCAAAGTCATCAAAGACCTaGAGGATCTTGCAGCGGTCG +
Preference number: 4 (lower is better)
Translates to: AMGQQVPAPSATRREVHSKSSKT*RILQRS
Trigger: CGACCGCTGCAAGATCCTGCAGGTCTTTGATGACTT...TGAATGAACTTCCCTCCTAGTTGCTGATGGCGCTGGTACCTGCTGGCCCATGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp TTGCAAAAAGTCAAGTCTGTCTGCTTCCCTCCAACTGCGAGAGCTCAGGGTCAGAGGCCCGCCCAGAGCTaGACACCTATGATGCCAAAG +
Preference number: 4 (lower is better)
Translates to: LQKVKSVCFPPTARAQGQRPAQS*TPMMPK
Trigger: CTTTGGCATCATAGGTGTGCAGCTCTGGGCGGGCCT...CTGACCCTGAGCTCTCGCAGTTGGAGGGAAGCAGACAGACTTGACTTTTTGCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp TTGCAAAAAGTCAAGTCTGTCTGCTTCCCTCCAACTGCGAGAGCTCAGGGTCAGGGTTGGCGCTGCCCGTaGGGCACACATTGTAGTAAC +
Preference number: 4 (lower is better)
Translates to: LQKVKSVCFPPTARAQGQGWRCP*GTHCSN
Trigger: GTTACTACAATGTGTGCCGCACGGGCAGCGCCAACC...CTGACCCTGAGCTCTCGCAGTTGGAGGGAAGCAGACAGACTTGACTTTTTGCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp GGTGTCTACGAAAGACTTCACAATAACGAGACAGTCAGGATGACAGGACAGACAGAGAGCAGGGACTCATaGTCCGCCGACGGCGGCTTG +
Preference number: 4 (lower is better)
Translates to: GVYERLHNNETVRMTGQTESRDS*SADGGL
Trigger: CAAGCCGCCGTCGGCGGAGCATGAGTCCCTGCTCTC...TGTCTGTCCTGTCATCCTGACTGTCTCGTTATTGTGAAGTCTTTCGTAGACACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp CAACTAGGAGGGAAGTTCATTCACACCATAGAAACTGTACAGCGACTGAGAGTGTGCGCTCGTCGTGGGTaGAGTCCCGCAGCGTGTCCT +
Preference number: 4 (lower is better)
Translates to: QLGGKFIHTIETVQRLRVCARRG*SPAACP
Trigger: AGGACACGCTGCGGGACTGCACCCACGACGAGCGCA...CACTCTCAGTCGCTGTACAGTTTCTATGGTGTGAATGAACTTCCCTCCTAGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp TATATATATATGTATGTATATGCACTGGAAGGGCCACCATGGGCCACGCAGGCCTTCTCCAGGGCCTGGTaGCCTCAGAGGCCTGAGGGT +
Preference number: 4 (lower is better)
Translates to: YIYMYVYALEGPPWATQAFSRAW*PQRPEG
Trigger: ACCCTCAGGCCTCTGAGGGCACCAGGCCCTGGAGAA...GGCCTGCGTGGCCCATGGTGGCCCTTCCAGTGCATATACATACATATATATATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp CAAACACCCAAGTCTAGAACCCGTTTGGGAAGCACTGCTATAGTGAAAGCTGAGTTCTCCAGGGCCTGGTaGCCTCAGAGGCCTGAGGGT +
Preference number: 4 (lower is better)
Translates to: QTPKSRTRLGSTAIVKAEFSRAW*PQRPEG
Trigger: ACCCTCAGGCCTCTGAGGGCACCAGGCCCTGGAGAA...CTCAGCTTTCACTATAGCAGTGCTTCCCAAACGGGTTCTAGACTTGGGTGTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp TTGCAAAAAGTCAAGTCTGTCTGCTTCCCTCCAACTGCGAGAGCTCAGGGTCAGCGGTCAGAGCTGCTTTaGCTTGAACCTACTGGGGCG +
Preference number: 4 (lower is better)
Translates to: LQKVKSVCFPPTARAQGQRSELL*LEPTGA
Trigger: CGCCCCAGTAGGTTCAAGGCAAAGCAGCTCTGACCG...CTGACCCTGAGCTCTCGCAGTTGGAGGGAAGCAGACAGACTTGACTTTTTGCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp CCACCCCTGCCTAGAATTCGGTCAGAGCTGCTTTGCCTTGAACCTACTGGGGCGGAATTCGGTCAGAGCTaGTTTGCCTTGAACCTACTG +
Preference number: 4 (lower is better)
Translates to: PPLPRIRSELLCLEPTGAEFGQS*FALNLL
Trigger: CAGTAGGTTCAAGGCAAAGCAGCTCTGACCGAATTC...CGCCCCAGTAGGTTCAAGGCAAAGCAGCTCTGACCGAATTCTAGGCAGGGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp GGTGTCTACGAAAGACTTCACAATAACGAGACAGTCAGGATGACAGGACAGACAGCATCCTGGGCTGGCTaGTTCCCCTCTCCAGGGCTC +
Preference number: 4 (lower is better)
Translates to: GVYERLHNNETVRMTGQTASWAG*FPSPGL
Trigger: GAGCCCTGGAGAGGGGAAGCAGCCAGCCCAGGATGC...TGTCTGTCCTGTCATCCTGACTGTCTCGTTATTGTGAAGTCTTTCGTAGACACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp GGTCAGAGCTGCTTTGCCTTGAACCTACTGGGGCGGGGGCATAGTTGCTCAGGAAAAGTCAAGTCTGTCTaGTTCCCTCCAACTGCGAGA +
Preference number: 4 (lower is better)
Translates to: GQSCFALNLLGRGHSCSGKVKSV*FPPTAR
Trigger: TCTCGCAGTTGGAGGGAAGCAGACAGACTTGACTTT...TCCTGAGCAACTATGCCCCCGCCCCAGTAGGTTCAAGGCAAAGCAGCTCTGACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp CTGAAGCCCTCGGAGGGGGTCTTAGCAAAGGCAAGGTTATTGCTGAAGTACAGCCTCGAGGTGTCTGCTTaGAGAGTCACACGGTTCAGG +
Preference number: 4 (lower is better)
Translates to: LKPSEGVLAKARLLLKYSLEVSA*RVTRFR
Trigger: CCTGAACCGTGTGACTCTGCAAGCAGACACCTCGAG...GCTGTACTTCAGCAATAACCTTGCCTTTGCTAAGACCCCCTCCGAGGGCTTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp CTTGTCCTGGCCAGTGGATCACAGCTTCCCTGGTTCTCATCTCTGTCACCCACATTGGTCTCCGAGAACTaGGTCGCTATGACAACGAGG +
Preference number: 4 (lower is better)
Translates to: LVLASGSQLPWFSSLSPTLVSEN*VAMTTR
Trigger: CCTCGTTGTCATAGCGACCCAGTTCTCGGAGACCAA...TGTGGGTGACAGAGATGAGAACCAGGGAAGCTGTGATCCACTGGCCAGGACAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp CTGAAGCCCTCGGAGGGGGTCTTAGCAAAGGCAAGGTTATTGCTGAAGTACAGCTCCTGGGTGAGGATCTaGAACACAGTGACGATGGCC +
Preference number: 4 (lower is better)
Translates to: LKPSEGVLAKARLLLKYSSWVRI*NTVTMA
Trigger: GGCCATCGTCACTGTGTTCCAGATCCTCACCCAGGA...GCTGTACTTCAGCAATAACCTTGCCTTTGCTAAGACCCCCTCCGAGGGCTTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp CAGCAACTAGGAGGGAAGTTCATTCACACCATAGAAACTGTACAGCGACTGAGACCAGGGCCACCAGCATaGGGTCCGGCTGCAGTGAGA +
Preference number: 4 (lower is better)
Translates to: QQLGGKFIHTIETVQRLRPGPPA*GPAAVR
Trigger: TCTCACTGCAGCCGGACCCCATGCTGGTGGCCCTGG...TCTCAGTCGCTGTACAGTTTCTATGGTGTGAATGAACTTCCCTCCTAGTTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp TATATATATATGTATGTATATGCACTGGAAGGGCCACCATGGGCCACGCAGGCCAGGAGCTCCGGGAGCTaGACAGGGAGCGCTGGTCAT +
Preference number: 4 (lower is better)
Translates to: YIYMYVYALEGPPWATQARSSGS*TGSAGH
Trigger: ATGACCAGCGCTCCCTGTCCAGCTCCCGGAGCTCCT...GGCCTGCGTGGCCCATGGTGGCCCTTCCAGTGCATATACATACATATATATATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp CAAACACCCAAGTCTAGAACCCGTTTGGGAAGCACTGCTATAGTGAAAGCTGAGCCCAGGTTGCCCACCTaGGGCAAAGCTTGCACCACC +
Preference number: 4 (lower is better)
Translates to: QTPKSRTRLGSTAIVKAEPRLPT*GKACTT
Trigger: GGTGGTGCAAGCTTTGCCCCAGGTGGGCAACCTGGG...CTCAGCTTTCACTATAGCAGTGCTTCCCAAACGGGTTCTAGACTTGGGTGTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp CAGCAACTAGGAGGGAAGTTCATTCACACCATAGAAACTGTACAGCGACTGAGAGTCTTTGCGGCCAGGTaGGCAGGCTGTGGGGTCCTC +
Preference number: 4 (lower is better)
Translates to: QQLGGKFIHTIETVQRLRVFAAR*AGCGVL
Trigger: GAGGACCCCACAGCCTGCCCACCTGGCCGCAAAGAC...TCTCAGTCGCTGTACAGTTTCTATGGTGTGAATGAACTTCCCTCCTAGTTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp AAAGTCAAGTCTGTCTGCTTCCCTCCAACTGCGAGAGCTCAGGGTCAGCCAGGACCGGACAGGGTTGAATaGGATCTCCTCCATCTCACA +
Preference number: 4 (lower is better)
Translates to: KVKSVCFPPTARAQGQPGPDRVE*DLLHLT
Trigger: TGTGAGATGGAGGAGATCCCATTCAACCCTGTCCGG...TCCTGGCTGACCCTGAGCTCTCGCAGTTGGAGGGAAGCAGACAGACTTGACTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp CTTGTCCTGGCCAGTGGATCACAGCTTCCCTGGTTCTCATCTCTGTCACCCACACCGGACAGGGTTGAATaGGATCTCCTCCATCTCACA +
Preference number: 4 (lower is better)
Translates to: LVLASGSQLPWFSSLSPTPDRVE*DLLHLT
Trigger: TGTGAGATGGAGGAGATCCCATTCAACCCTGTCCGG...TGTGGGTGACAGAGATGAGAACCAGGGAAGCTGTGATCCACTGGCCAGGACAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp CAACTAGGAGGGAAGTTCATTCACACCATAGAAACTGTACAGCGACTGAGAGTGTGGGCAGGAGAGGGCTaGAGGCATCCGGGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: QLGGKFIHTIETVQRLRVWAGEG*RHPGRR
Trigger: CCTTCTCCCCGGATGCCTCCAGCCCTCTCCTGCCCA...CACTCTCAGTCGCTGTACAGTTTCTATGGTGTGAATGAACTTCCCTCCTAGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp TATATATATATGTATGTATATGCACTGGAAGGGCCACCATGGGCCACGCAGGCCGAAGTGCTCAGGAGCTaGGGACCTCACCTGGGGCCA +
Preference number: 4 (lower is better)
Translates to: YIYMYVYALEGPPWATQAEVLRS*GPHLGP
Trigger: TGGCCCCAGGTGAGGTCCCCAGCTCCTGAGCACTTC...GGCCTGCGTGGCCCATGGTGGCCCTTCCAGTGCATATACATACATATATATATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp GGTCAGAGCTGCTTTGCCTTGAACCTACTGGGGCGGGGGCATAGTTGCTCAGGACTGAGGCTGCTTGACTaGTGTCTGATCCTGTTAACT +
Preference number: 4 (lower is better)
Translates to: GQSCFALNLLGRGHSCSGLRLLD*CLILLT
Trigger: AGTTAACAGGATCAGACACCAGTCAAGCAGCCTCAG...TCCTGAGCAACTATGCCCCCGCCCCAGTAGGTTCAAGGCAAAGCAGCTCTGACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp AAAGTCAAGTCTGTCTGCTTCCCTCCAACTGCGAGAGCTCAGGGTCAGCCAGGAGGATCACAGCTTCCCTaGTTCTCATCTCTGTCACCC +
Preference number: 4 (lower is better)
Translates to: KVKSVCFPPTARAQGQPGGSQLP*FSSLSP
Trigger: GGGTGACAGAGATGAGAACCAGGGAAGCTGTGATCC...TCCTGGCTGACCCTGAGCTCTCGCAGTTGGAGGGAAGCAGACAGACTTGACTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp GAATTCGGTCAGAGCTGCTTTGCCTTGAACCTACTGGGGCGGGGGCATAGTTGCTCAAAACAACACTGGTaGTGGCTGCCGCTTGGTTTC +
Preference number: 4 (lower is better)
Translates to: EFGQSCFALNLLGRGHSCSKQHW*WLPLGF
Trigger: GAAACCAAGCGGCAGCCACCACCAGTGTTGTTTTGA...GCAACTATGCCCCCGCCCCAGTAGGTTCAAGGCAAAGCAGCTCTGACCGAATTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp AGTACAGCATCTGCAAACTCGTGGCCCCTGCAGCCTCTCCAGATCACTGCCACCTATTCAAAACAACACTaGTGGTGGCTGCCGCTTGGT +
Preference number: 4 (lower is better)
Translates to: STASANSWPLQPLQITATYSKQH*WWLPLG
Trigger: ACCAAGCGGCAGCCACCACCAGTGTTGTTTTGAATA...GGTGGCAGTGATCTGGAGAGGCTGCAGGGGCCACGAGTTTGCAGATGCTGTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR CAA 72 bp AAGCCCTCGGAGGGGGTCTTAGCAAAGGCAAGGTTATaGCTGAAGTACAGCATCTGCAAACTCGTGGCCCCT +
Preference number: 4 (lower is better)
Translates to: KPSEGVLAKARL*LKYSICKLVAP
Trigger: AGGGGCCACGAGTTTGCAGATGCTGTACTTCAGCAATAACCTTGCCTTTGCTAAGACCCCCTCCGAGGGCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR CAA 72 bp TTCCCCACAGCCAGGCCCATGTGGGTTAGGGCAAGTTaGTGCTTTTGTGATAGACACAAGCCTGAGGCCATG +
Preference number: 4 (lower is better)
Translates to: FPTARPMWVRAS*CFCDRHKPEAM
Trigger: CATGGCCTCAGGCTTGTGTCTATCACAAAAGCACAAACTTGCCCTAACCCACATGGGCCTGGCTGTGGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR TCA 90 bp TATATATATATGTATGTATATGCACTGGAAGGGCCACCATGGGCCACGCAGGCCGGTTGCACACCATCTTaGTGCACCAGTTCCGGGGGC +
Preference number: 4 (lower is better)
Translates to: YIYMYVYALEGPPWATQAGCTPS*CTSSGG
Trigger: GCCCCCGGAACTGGTGCATCAAGATGGTGTGCAACC...GGCCTGCGTGGCCCATGGTGGCCCTTCCAGTGCATATACATACATATATATATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR TCA 90 bp TTGCAAAAAGTCAAGTCTGTCTGCTTCCCTCCAACTGCGAGAGCTCAGGGTCAGGGATGGCTGACAGGTTaGTGTTCTGAAGGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: LQKVKSVCFPPTARAQGQGWLTG*CSEGPG
Trigger: CCCTGGACCTTCAGAACATCAACCTGTCAGCCATCC...CTGACCCTGAGCTCTCGCAGTTGGAGGGAAGCAGACAGACTTGACTTTTTGCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR TCA 90 bp TTGCAAAAAGTCAAGTCTGTCTGCTTCCCTCCAACTGCGAGAGCTCAGGGTCAGCACGGTGCGGATGGCTaGCAGGTTGATGTTCTGAAG +
Preference number: 4 (lower is better)
Translates to: LQKVKSVCFPPTARAQGQHGADG*QVDVLK
Trigger: CTTCAGAACATCAACCTGTCAGCCATCCGCACCGTG...CTGACCCTGAGCTCTCGCAGTTGGAGGGAAGCAGACAGACTTGACTTTTTGCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR TCA 90 bp CTGAAGCCCTCGGAGGGGGTCTTAGCAAAGGCAAGGTTATTGCTGAAGTACAGCCATCCCCTTGTATGGTaGAGTTCTCCTCCAGGAAGC +
Preference number: 4 (lower is better)
Translates to: LKPSEGVLAKARLLLKYSHPLVW*SSPPGS
Trigger: GCTTCCTGGAGGAGAACTTCACCATACAAGGGGATG...GCTGTACTTCAGCAATAACCTTGCCTTTGCTAAGACCCCCTCCGAGGGCTTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR TCA 90 bp TTGCAAAAAGTCAAGTCTGTCTGCTTCCCTCCAACTGCGAGAGCTCAGGGTCAGTGGGCAATAATGGTCTaGCACAGGACCCGGAACCTG +
Preference number: 4 (lower is better)
Translates to: LQKVKSVCFPPTARAQGQWAIMV*HRTRNL
Trigger: CAGGTTCCGGGTCCTGTGTCAGACCATTATTGCCCA...CTGACCCTGAGCTCTCGCAGTTGGAGGGAAGCAGACAGACTTGACTTTTTGCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR TCA 90 bp TTGCAAAAAGTCAAGTCTGTCTGCTTCCCTCCAACTGCGAGAGCTCAGGGTCAGAGTCGCAAGATGACCTaGGGCTGCTTGACTGGTGTC +
Preference number: 4 (lower is better)
Translates to: LQKVKSVCFPPTARAQGQSRKMT*GCLTGV
Trigger: GACACCAGTCAAGCAGCCTCAGGTCATCTTGCGACT...CTGACCCTGAGCTCTCGCAGTTGGAGGGAAGCAGACAGACTTGACTTTTTGCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp CAGCAACTAGGAGGGAAGTTCATTCACACCATAGAAACTGTACAGCGACTGAGACGCGGCGCTTGGCCTTaGGCAGGATGTGGCAGACAT +
Preference number: 4 (lower is better)
Translates to: QQLGGKFIHTIETVQRLRRGAWP*AGCGRH
Trigger: ATGTCTGCCACATCCTGCGCAAGGCCAAGCGCCGCG...TCTCAGTCGCTGTACAGTTTCTATGGTGTGAATGAACTTCCCTCCTAGTTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp GGTGTCTACGAAAGACTTCACAATAACGAGACAGTCAGGATGACAGGACAGACACTGCGTAGGTACGCCTaGTCGCCGAAGTACAGGCCC +
Preference number: 4 (lower is better)
Translates to: GVYERLHNNETVRMTGQTLRRYA*SPKYRP
Trigger: GGGCCTGTACTTCGGCGAGCAGGCGTACCTACGCAG...TGTCTGTCCTGTCATCCTGACTGTCTCGTTATTGTGAAGTCTTTCGTAGACACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp CAAACACCCAAGTCTAGAACCCGTTTGGGAAGCACTGCTATAGTGAAAGCTGAGCTGGCTGGCAGACACTaGAGGGTGGAAGAACTCGGC +
Preference number: 4 (lower is better)
Translates to: QTPKSRTRLGSTAIVKAELAGRH*RVEELG
Trigger: GCCGAGTTCTTCCACCCTGCAGTGTCTGCCAGCCAG...CTCAGCTTTCACTATAGCAGTGCTTCCCAAACGGGTTCTAGACTTGGGTGTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp CTTGTCCTGGCCAGTGGATCACAGCTTCCCTGGTTCTCATCTCTGTCACCCACACTAAGGGGATGTGTGTaGTCTGGGGTGTCTACGAAA +
Preference number: 4 (lower is better)
Translates to: LVLASGSQLPWFSSLSPTLRGCV*SGVSTK
Trigger: TTTCGTAGACACCCCAGAGCACACACATCCCCTTAG...TGTGGGTGACAGAGATGAGAACCAGGGAAGCTGTGATCCACTGGCCAGGACAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp GGTGTCTACGAAAGACTTCACAATAACGAGACAGTCAGGATGACAGGACAGACACCACCCCCTCAGAAGTaGTCAGGAGCTGGGGACCTC +
Preference number: 4 (lower is better)
Translates to: GVYERLHNNETVRMTGQTPPPQK*SGAGDL
Trigger: GAGGTCCCCAGCTCCTGAGCACTTCTGAGGGGGTGG...TGTCTGTCCTGTCATCCTGACTGTCTCGTTATTGTGAAGTCTTTCGTAGACACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp GCCATGGGCCAGCAGGTACCAGCGCCATCAGCAACTAGGAGGGAAGTTCATTCAGAATTCGGTCAGAGCTaGTTTGCCTTGAACCTACTG +
Preference number: 4 (lower is better)
Translates to: AMGQQVPAPSATRREVHSEFGQS*FALNLL
Trigger: CAGTAGGTTCAAGGCAAAGCAGCTCTGACCGAATTC...TGAATGAACTTCCCTCCTAGTTGCTGATGGCGCTGGTACCTGCTGGCCCATGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp TATATATATATGTATGTATATGCACTGGAAGGGCCACCATGGGCCACGCAGGCCCCACCCCAGCTTCTTTaGTGCCAGGGCCCTGAAGCA +
Preference number: 4 (lower is better)
Translates to: YIYMYVYALEGPPWATQAPPQLL*CQGPEA
Trigger: TGCTTCAGGGCCCTGGCAGCAAAGAAGCTGGGGTGG...GGCCTGCGTGGCCCATGGTGGCCCTTCCAGTGCATATACATACATATATATATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp GGTCAGAGCTGCTTTGCCTTGAACCTACTGGGGCGGGGGCATAGTTGCTCAGGAAGCAACACGCGGACTTaGAAAAAGTCAAGTCTGTCT +
Preference number: 4 (lower is better)
Translates to: GQSCFALNLLGRGHSCSGSNTRT*KKSSLS
Trigger: AGACAGACTTGACTTTTTGCAAGTCCGCGTGTTGCT...TCCTGAGCAACTATGCCCCCGCCCCAGTAGGTTCAAGGCAAAGCAGCTCTGACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp GGTGTCTACGAAAGACTTCACAATAACGAGACAGTCAGGATGACAGGACAGACAACCAGTTCCGGGGGCTaGTGGTCTGTCGCAGGCAGA +
Preference number: 4 (lower is better)
Translates to: GVYERLHNNETVRMTGQTTSSGG*WSVAGR
Trigger: TCTGCCTGCGACAGACCACCAGCCCCCGGAACTGGT...TGTCTGTCCTGTCATCCTGACTGTCTCGTTATTGTGAAGTCTTTCGTAGACACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp CTGAAGCCCTCGGAGGGGGTCTTAGCAAAGGCAAGGTTATTGCTGAAGTACAGCGCCTTGCGCAGGATGTaGCAGACATACTGGAAGATC +
Preference number: 4 (lower is better)
Translates to: LKPSEGVLAKARLLLKYSALRRM*QTYWKI
Trigger: GATCTTCCAGTATGTCTGCCACATCCTGCGCAAGGC...GCTGTACTTCAGCAATAACCTTGCCTTTGCTAAGACCCCCTCCGAGGGCTTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp CAACTAGGAGGGAAGTTCATTCACACCATAGAAACTGTACAGCGACTGAGAGTGCCGAGTAGGAGCGATTaGCGTCACCCTCCGCCTGGA +
Preference number: 4 (lower is better)
Translates to: QLGGKFIHTIETVQRLRVPSRSD*RHPPPG
Trigger: TCCAGGCGGAGGGTGACGCCAATCGCTCCTACTCGG...CACTCTCAGTCGCTGTACAGTTTCTATGGTGTGAATGAACTTCCCTCCTAGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp GGTCAGAGCTGCTTTGCCTTGAACCTACTGGGGCGGGGGCATAGTTGCTCAGGACAAACTCTTCTATGTTaGATGAGCTCTGGTCCTCGT +
Preference number: 4 (lower is better)
Translates to: GQSCFALNLLGRGHSCSGQTLLC*MSSGPR
Trigger: ACGAGGACCAGAGCTCATCCAACATAGAAGAGTTTG...TCCTGAGCAACTATGCCCCCGCCCCAGTAGGTTCAAGGCAAAGCAGCTCTGACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp TATATATATATGTATGTATATGCACTGGAAGGGCCACCATGGGCCACGCAGGCCGCCCATTGGGGGTCATaGGGATTGGGCAGAGCTTGG +
Preference number: 4 (lower is better)
Translates to: YIYMYVYALEGPPWATQAAHWGS*GLGRAW
Trigger: CCAAGCTCTGCCCAATCCCCATGACCCCCAATGGGC...GGCCTGCGTGGCCCATGGTGGCCCTTCCAGTGCATATACATACATATATATATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp CAGCAACTAGGAGGGAAGTTCATTCACACCATAGAAACTGTACAGCGACTGAGACACCCAGTGGGAGACTaGGGTCCAGGTGCCCATTGG +
Preference number: 4 (lower is better)
Translates to: QQLGGKFIHTIETVQRLRHPVGD*GPGAHW
Trigger: CCAATGGGCACCTGGACCCCAGTCTCCCACTGGGTG...TCTCAGTCGCTGTACAGTTTCTATGGTGTGAATGAACTTCCCTCCTAGTTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp TATATATATATGTATGTATATGCACTGGAAGGGCCACCATGGGCCACGCAGGCCCGGGGAGAAGGGACTTaGGGGTGCTTGACTGCTGTC +
Preference number: 4 (lower is better)
Translates to: YIYMYVYALEGPPWATQARGEGT*GCLTAV
Trigger: GACAGCAGTCAAGCACCCCCAAGTCCCTTCTCCCCG...GGCCTGCGTGGCCCATGGTGGCCCTTCCAGTGCATATACATACATATATATATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp TATATATATATGTATGTATATGCACTGGAAGGGCCACCATGGGCCACGCAGGCCCTGGGCCTTTCTGGCTaGCAGACACTGCAGGGTGGA +
Preference number: 4 (lower is better)
Translates to: YIYMYVYALEGPPWATQALGLSG*QTLQGG
Trigger: TCCACCCTGCAGTGTCTGCCAGCCAGAAAGGCCCAG...GGCCTGCGTGGCCCATGGTGGCCCTTCCAGTGCATATACATACATATATATATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp CTTGTCCTGGCCAGTGGATCACAGCTTCCCTGGTTCTCATCTCTGTCACCCACATGTATGTATATGCACTaGAAGGGCCACCATGGGCCA +
Preference number: 4 (lower is better)
Translates to: LVLASGSQLPWFSSLSPTCMYMH*KGHHGP
Trigger: TGGCCCATGGTGGCCCTTCCAGTGCATATACATACA...TGTGGGTGACAGAGATGAGAACCAGGGAAGCTGTGATCCACTGGCCAGGACAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp CAAACACCCAAGTCTAGAACCCGTTTGGGAAGCACTGCTATAGTGAAAGCTGAGACATGTGCCCTGGGGTaGGTCTGGCCAGAATCCCAG +
Preference number: 4 (lower is better)
Translates to: QTPKSRTRLGSTAIVKAETCALG*VWPESQ
Trigger: CTGGGATTCTGGCCAGACCCACCCCAGGGCACATGT...CTCAGCTTTCACTATAGCAGTGCTTCCCAAACGGGTTCTAGACTTGGGTGTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp TTGCAAAAAGTCAAGTCTGTCTGCTTCCCTCCAACTGCGAGAGCTCAGGGTCAGCACGTGGGAGCCACGTaGGATCTTAGCAGCGTTTCT +
Preference number: 4 (lower is better)
Translates to: LQKVKSVCFPPTARAQGQHVGAT*DLSSVS
Trigger: AGAAACGCTGCTAAGATCCCACGTGGCTCCCACGTG...CTGACCCTGAGCTCTCGCAGTTGGAGGGAAGCAGACAGACTTGACTTTTTGCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp GAATTCGGTCAGAGCTGCTTTGCCTTGAACCTACTGGGGCGGGGGCATAGTTGCTTCCAAGTCAGAGTTTaGGAACAAGAACAAGGCCCC +
Preference number: 4 (lower is better)
Translates to: EFGQSCFALNLLGRGHSCFQVRV*EQEQGP
Trigger: GGGGCCTTGTTCTTGTTCCCAAACTCTGACTTGGAA...GCAACTATGCCCCCGCCCCAGTAGGTTCAAGGCAAAGCAGCTCTGACCGAATTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp CAGCAACTAGGAGGGAAGTTCATTCACACCATAGAAACTGTACAGCGACTGAGAGGGCAGTGTTGGGCTTaGACCGAGCCATCCCCACAG +
Preference number: 4 (lower is better)
Translates to: QQLGGKFIHTIETVQRLRGQCWA*TEPSPQ
Trigger: CTGTGGGGATGGCTCGGTCCAAGCCCAACACTGCCC...TCTCAGTCGCTGTACAGTTTCTATGGTGTGAATGAACTTCCCTCCTAGTTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp TGTCCTGGCCAGTGGATCACAGCTTCCCTGGTTCTCATCTCTGTCACCCACAGGCTGAGGCTGCTTGACTaGTGTCTGATCCTGTTAACT +
Preference number: 4 (lower is better)
Translates to: CPGQWITASLVLISVTHRLRLLD*CLILLT
Trigger: AGTTAACAGGATCAGACACCAGTCAAGCAGCCTCAG...CCTGTGGGTGACAGAGATGAGAACCAGGGAAGCTGTGATCCACTGGCCAGGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp GGTGTCTACGAAAGACTTCACAATAACGAGACAGTCAGGATGACAGGACAGACAAGGCCGAGGGCTTTCTaGAGGAGGTGGCCTCTGCCT +
Preference number: 4 (lower is better)
Translates to: GVYERLHNNETVRMTGQTRPRAF*RRWPLP
Trigger: AGGCAGAGGCCACCTCCTCCAGAAAGCCCTCGGCCT...TGTCTGTCCTGTCATCCTGACTGTCTCGTTATTGTGAAGTCTTTCGTAGACACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp CAACTAGGAGGGAAGTTCATTCACACCATAGAAACTGTACAGCGACTGAGAGTGGTGGTGGCTGCCGCTTaGTTTCTCTACACCCGGGCC +
Preference number: 4 (lower is better)
Translates to: QLGGKFIHTIETVQRLRVVVAAA*FLYTRA
Trigger: GGCCCGGGTGTAGAGAAACCAAGCGGCAGCCACCAC...CACTCTCAGTCGCTGTACAGTTTCTATGGTGTGAATGAACTTCCCTCCTAGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR TCA 90 bp TTGCAAAAAGTCAAGTCTGTCTGCTTCCCTCCAACTGCGAGAGCTCAGGGTCAGCATCCCCTTGTATGGTaGAGTTCTCCTCCAGGAAGC +
Preference number: 4 (lower is better)
Translates to: LQKVKSVCFPPTARAQGQHPLVW*SSPPGS
Trigger: GCTTCCTGGAGGAGAACTTCACCATACAAGGGGATG...CTGACCCTGAGCTCTCGCAGTTGGAGGGAAGCAGACAGACTTGACTTTTTGCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR TCA 90 bp CTGAAGCCCTCGGAGGGGGTCTTAGCAAAGGCAAGGTTATTGCTGAAGTACAGCGGGCAAACATGCTGGTaGAGACCACATTGCAGATCT +
Preference number: 4 (lower is better)
Translates to: LKPSEGVLAKARLLLKYSGQTCW*RPHCRS
Trigger: AGATCTGCAATGTGGTCTTCACCAGCATGTTTGCCC...GCTGTACTTCAGCAATAACCTTGCCTTTGCTAAGACCCCCTCCGAGGGCTTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR TCA 90 bp CTTGTCCTGGCCAGTGGATCACAGCTTCCCTGGTTCTCATCTCTGTCACCCACAACACCACGATGTCGATaGTGGACACGAAGACAAGAA +
Preference number: 4 (lower is better)
Translates to: LVLASGSQLPWFSSLSPTTPRCR*WTRRQE
Trigger: TTCTTGTCTTCGTGTCCATCATCGACATCGTGGTGT...TGTGGGTGACAGAGATGAGAACCAGGGAAGCTGTGATCCACTGGCCAGGACAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR TCA 90 bp CAACTAGGAGGGAAGTTCATTCACACCATAGAAACTGTACAGCGACTGAGAGTGGCACGAACTGCGCGGTaGGCACGAAGCTCACGAAGT +
Preference number: 4 (lower is better)
Translates to: QLGGKFIHTIETVQRLRVARTAR*ARSSRS
Trigger: ACTTCGTGAGCTTCGTGCTCACCGCGCAGTTCGTGC...CACTCTCAGTCGCTGTACAGTTTCTATGGTGTGAATGAACTTCCCTCCTAGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR TCA 90 bp GAATTCGGTCAGAGCTGCTTTGCCTTGAACCTACTGGGGCGGGGGCATAGTTGCAGGCAAGGTTATTGCTaGAGTACAGCATCTGCAAAC +
Preference number: 4 (lower is better)
Translates to: EFGQSCFALNLLGRGHSCRQGYC*STASAN
Trigger: GTTTGCAGATGCTGTACTTCAGCAATAACCTTGCCT...GCAACTATGCCCCCGCCCCAGTAGGTTCAAGGCAAAGCAGCTCTGACCGAATTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR TCA 90 bp CCACCCCTGCCTAGAATTCGGTCAGAGCTGCTTTGCCTTGAACCTACTGGGGCGCTCTGCCAGGAACACTaGTTATTGCACAAAGACAAA +
Preference number: 4 (lower is better)
Translates to: PPLPRIRSELLCLEPTGALCQEH*LLHKDK
Trigger: TTTGTCTTTGTGCAATAATCAGTGTTCCTGGCAGAG...CGCCCCAGTAGGTTCAAGGCAAAGCAGCTCTGACCGAATTCTAGGCAGGGGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp CTGAAGCCCTCGGAGGGGGTCTTAGCAAAGGCAAGGTTATTGCTGAAGTACAGCAAGTCATCAAAGACCTaGAGGATCTTGCAGCGGTCG +
Preference number: 4 (lower is better)
Translates to: LKPSEGVLAKARLLLKYSKSSKT*RILQRS
Trigger: CGACCGCTGCAAGATCCTGCAGGTCTTTGATGACTT...GCTGTACTTCAGCAATAACCTTGCCTTTGCTAAGACCCCCTCCGAGGGCTTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp CAGCAACTAGGAGGGAAGTTCATTCACACCATAGAAACTGTACAGCGACTGAGATTCTCGAAGGTGGCATaGCGGCTCATGCCCTCGCAC +
Preference number: 4 (lower is better)
Translates to: QQLGGKFIHTIETVQRLRFSKVA*RLMPSH
Trigger: GTGCGAGGGCATGAGCCGGCATGCCACCTTCGAGAA...TCTCAGTCGCTGTACAGTTTCTATGGTGTGAATGAACTTCCCTCCTAGTTGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp GGTGTCTACGAAAGACTTCACAATAACGAGACAGTCAGGATGACAGGACAGACAGGTCCAGCTCACCCTTaGTGTCTTTGCGGCCAGGTG +
Preference number: 4 (lower is better)
Translates to: GVYERLHNNETVRMTGQTGPAHP*CLCGQV
Trigger: CACCTGGCCGCAAAGACAGCAAGGGTGAGCTGGACC...TGTCTGTCCTGTCATCCTGACTGTCTCGTTATTGTGAAGTCTTTCGTAGACACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp CAACTAGGAGGGAAGTTCATTCACACCATAGAAACTGTACAGCGACTGAGAGTGCCACCCCAGCTTCTTTaGTGCCAGGGCCCTGAAGCA +
Preference number: 4 (lower is better)
Translates to: QLGGKFIHTIETVQRLRVPPQLL*CQGPEA
Trigger: TGCTTCAGGGCCCTGGCAGCAAAGAAGCTGGGGTGG...CACTCTCAGTCGCTGTACAGTTTCTATGGTGTGAATGAACTTCCCTCCTAGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp CTGAAGCCCTCGGAGGGGGTCTTAGCAAAGGCAAGGTTATTGCTGAAGTACAGCGACAACAGGAAAGGCTaGTCAGTGGAGTCGCAAGAT +
Preference number: 4 (lower is better)
Translates to: LKPSEGVLAKARLLLKYSDNRKG*SVESQD
Trigger: ATCTTGCGACTCCACTGAGCAGCCTTTCCTGTTGTC...GCTGTACTTCAGCAATAACCTTGCCTTTGCTAAGACCCCCTCCGAGGGCTTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp GGTGTCTACGAAAGACTTCACAATAACGAGACAGTCAGGATGACAGGACAGACAAGATGCCAAGGTGCCTaGCCACCACCGCTCTACGGA +
Preference number: 4 (lower is better)
Translates to: GVYERLHNNETVRMTGQTRCQGA*PPPLYG
Trigger: TCCGTAGAGCGGTGGTGGGCAGGCACCTTGGCATCT...TGTCTGTCCTGTCATCCTGACTGTCTCGTTATTGTGAAGTCTTTCGTAGACACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp CAACTAGGAGGGAAGTTCATTCACACCATAGAAACTGTACAGCGACTGAGAGTGCCGTCTCTGCACAGATaGCAAGGTGCCTGCCCACCA +
Preference number: 4 (lower is better)
Translates to: QLGGKFIHTIETVQRLRVPSLHR*QGACPP
Trigger: TGGTGGGCAGGCACCTTGGCATCTGTGCAGAGACGG...CACTCTCAGTCGCTGTACAGTTTCTATGGTGTGAATGAACTTCCCTCCTAGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp TTGCAAAAAGTCAAGTCTGTCTGCTTCCCTCCAACTGCGAGAGCTCAGGGTCAGTGCAAAGTCTGGCAATaGCGGCTTCCGAGATGTCTC +
Preference number: 4 (lower is better)
Translates to: LQKVKSVCFPPTARAQGQCKVWQ*RLPRCL
Trigger: GAGACATCTCGGAAGCCGGCATTGCCAGACTTTGCA...CTGACCCTGAGCTCTCGCAGTTGGAGGGAAGCAGACAGACTTGACTTTTTGCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000402142.4
CDS-3UTR CCA 90 bp GCCATGGGCCAGCAGGTACCAGCGCCATCAGCAACTAGGAGGGAAGTTCATTCACAAACTCTTCTATGTTaGATGAGCTCTGGTCCTCGT +
Preference number: 4 (lower is better)
Translates to: AMGQQVPAPSATRREVHSQTLLC*MSSGPR
Trigger: ACGAGGACCAGAGCTCATCCAACATAGAAGAGTTTG...TGAATGAACTTCCCTCCTAGTTGCTGATGGCGCTGGTACCTGCTGGCCCATGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp GGTGTCTACGAAAGACTTCACAATAACGAGACAGTCAGGATGACAGGACAGACAACGCATGGGCTCAGGTaGGTCCAGCTCACCCTTGCT +
Preference number: 4 (lower is better)
Translates to: GVYERLHNNETVRMTGQTTHGLR*VQLTLA
Trigger: AGCAAGGGTGAGCTGGACCCACCTGAGCCCATGCGT...TGTCTGTCCTGTCATCCTGACTGTCTCGTTATTGTGAAGTCTTTCGTAGACACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp GGTGTCTACGAAAGACTTCACAATAACGAGACAGTCAGGATGACAGGACAGACACCTGCAGCGCAATCTTaGGGAGGGTTCCAGTGCCAG +
Preference number: 4 (lower is better)
Translates to: GVYERLHNNETVRMTGQTPAAQS*GGFQCQ
Trigger: CTGGCACTGGAACCCTCCCCAAGATTGCGCTGCAGG...TGTCTGTCCTGTCATCCTGACTGTCTCGTTATTGTGAAGTCTTTCGTAGACACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp CAGCAACTAGGAGGGAAGTTCATTCACACCATAGAAACTGTACAGCGACTGAGACCTGCAGCGCAATCTTaGGGAGGGTTCCAGTGCCAG +
Preference number: 4 (lower is better)
Translates to: QQLGGKFIHTIETVQRLRPAAQS*GGFQCQ
Trigger: CTGGCACTGGAACCCTCCCCAAGATTGCGCTGCAGG...TCTCAGTCGCTGTACAGTTTCTATGGTGTGAATGAACTTCCCTCCTAGTTGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp CAAACACCCAAGTCTAGAACCCGTTTGGGAAGCACTGCTATAGTGAAAGCTGAGTGGGGTGGGAAGATGTaGCCTCCAGGTGACGCGAAA +
Preference number: 4 (lower is better)
Translates to: QTPKSRTRLGSTAIVKAEWGGKM*PPGDAK
Trigger: TTTCGCGTCACCTGGAGGCCACATCTTCCCACCCCA...CTCAGCTTTCACTATAGCAGTGCTTCCCAAACGGGTTCTAGACTTGGGTGTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp GGTGTCTACGAAAGACTTCACAATAACGAGACAGTCAGGATGACAGGACAGACAGCATCTGCAAACTCGTaGCCCCTGCAGCCTCTCCAG +
Preference number: 4 (lower is better)
Translates to: GVYERLHNNETVRMTGQTASANS*PLQPLQ
Trigger: CTGGAGAGGCTGCAGGGGCCACGAGTTTGCAGATGC...TGTCTGTCCTGTCATCCTGACTGTCTCGTTATTGTGAAGTCTTTCGTAGACACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR TCA 90 bp CAAACACCCAAGTCTAGAACCCGTTTGGGAAGCACTGCTATAGTGAAAGCTGAGGGTTCCATCGGTCCTTaGAGAAGCGCCTCAGACCAA +
Preference number: 4 (lower is better)
Translates to: QTPKSRTRLGSTAIVKAEGSIGP*RSASDQ
Trigger: TTGGTCTGAGGCGCTTCTTCAAGGACCGATGGAACC...CTCAGCTTTCACTATAGCAGTGCTTCCCAAACGGGTTCTAGACTTGGGTGTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR TCA 90 bp TATATATATATGTATGTATATGCACTGGAAGGGCCACCATGGGCCACGCAGGCCAGGACCGGACAGGGTTaGATGGGATCTCCTCCATCT +
Preference number: 4 (lower is better)
Translates to: YIYMYVYALEGPPWATQARTGQG*MGSPPS
Trigger: AGATGGAGGAGATCCCATTCAACCCTGTCCGGTCCT...GGCCTGCGTGGCCCATGGTGGCCCTTCCAGTGCATATACATACATATATATATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp CTGCCTCGAGGTGTCTGCTTGCAGAGTCACACGGTTCAGGGTAAGGGGAGGTTTTTGCAGCCAAAAATATaGATCCCAAGGATGCTGAAG +
Preference number: 4 (lower is better)
Translates to: LPRGVCLQSHTVQGKGRFLQPKI*IPRMLK
Trigger: CTTCAGCATCCTTGGGATGCATATTTTTGGCTGCAA...AAACCTCCCCTTACCCTGAACCGTGTGACTCTGCAAGCAGACACCTCGAGGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp CAGCAACTAGGAGGGAAGTTCATTCACACCATAGAAACTGTACAGCGACTGAGAAGACTGGGCCGTCTCTaGACAGATGCCAAGGTGCCT +
Preference number: 4 (lower is better)
Translates to: QQLGGKFIHTIETVQRLRRLGRL*TDAKVP
Trigger: AGGCACCTTGGCATCTGTGCAGAGACGGCCCAGTCT...TCTCAGTCGCTGTACAGTTTCTATGGTGTGAATGAACTTCCCTCCTAGTTGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp TATATATATATGTATGTATATGCACTGGAAGGGCCACCATGGGCCACGCAGGCCAATAGGCGCCAGGTCTaGGTGTGGGACATGAGGATC +
Preference number: 4 (lower is better)
Translates to: YIYMYVYALEGPPWATQANRRQV*VWDMRI
Trigger: GATCCTCATGTCCCACACCCAGACCTGGCGCCTATT...GGCCTGCGTGGCCCATGGTGGCCCTTCCAGTGCATATACATACATATATATATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp CAAACACCCAAGTCTAGAACCCGTTTGGGAAGCACTGCTATAGTGAAAGCTGAGATGTCGTCGCACGGCTaGTACATGCCAAGTGTCACG +
Preference number: 4 (lower is better)
Translates to: QTPKSRTRLGSTAIVKAEMSSHG*YMPSVT
Trigger: CGTGACACTTGGCATGTACCAGCCGTGCGACGACAT...CTCAGCTTTCACTATAGCAGTGCTTCCCAAACGGGTTCTAGACTTGGGTGTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp AAAGTCAAGTCTGTCTGCTTCCCTCCAACTGCGAGAGCTCAGGGTCAGCCAGGATCCAGAGTGATCACCTaGAAGATGACAATCCAAGCA +
Preference number: 4 (lower is better)
Translates to: KVKSVCFPPTARAQGQPGSRVIT*KMTIQA
Trigger: TGCTTGGATTGTCATCTTCCAGGTGATCACTCTGGA...TCCTGGCTGACCCTGAGCTCTCGCAGTTGGAGGGAAGCAGACAGACTTGACTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp TATATATATATGTATGTATATGCACTGGAAGGGCCACCATGGGCCACGCAGGCCTTGGTCACAGGCTGCTaGTCCACAGCAACAGCATCC +
Preference number: 4 (lower is better)
Translates to: YIYMYVYALEGPPWATQALVTGC*STATAS
Trigger: GGATGCTGTTGCTGTGGACCAGCAGCCTGTGACCAA...GGCCTGCGTGGCCCATGGTGGCCCTTCCAGTGCATATACATACATATATATATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp CAAACACCCAAGTCTAGAACCCGTTTGGGAAGCACTGCTATAGTGAAAGCTGAGTTTTCTGGGCCTTTCTaGCTGGCAGACACTGCAGGG +
Preference number: 4 (lower is better)
Translates to: QTPKSRTRLGSTAIVKAEFSGPF*LADTAG
Trigger: CCCTGCAGTGTCTGCCAGCCAGAAAGGCCCAGAAAA...CTCAGCTTTCACTATAGCAGTGCTTCCCAAACGGGTTCTAGACTTGGGTGTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp TATATATATATGTATGTATATGCACTGGAAGGGCCACCATGGGCCACGCAGGCCCACGTGGGAGCCACGTaGGATCTTAGCAGCGTTTCT +
Preference number: 4 (lower is better)
Translates to: YIYMYVYALEGPPWATQAHVGAT*DLSSVS
Trigger: AGAAACGCTGCTAAGATCCCACGTGGCTCCCACGTG...GGCCTGCGTGGCCCATGGTGGCCCTTCCAGTGCATATACATACATATATATATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp TATATATATATGTATGTATATGCACTGGAAGGGCCACCATGGGCCACGCAGGCCGCCCAACCTTCCACATaGTATTCCCAGGCCACACAG +
Preference number: 4 (lower is better)
Translates to: YIYMYVYALEGPPWATQAAQPST*YSQATQ
Trigger: CTGTGTGGCCTGGGAATACCATGTGGAAGGTTGGGC...GGCCTGCGTGGCCCATGGTGGCCCTTCCAGTGCATATACATACATATATATATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp CAAACACCCAAGTCTAGAACCCGTTTGGGAAGCACTGCTATAGTGAAAGCTGAGACAGCCAGGCCCATGTaGGTTAGGGCAAGTTTGTGC +
Preference number: 4 (lower is better)
Translates to: QTPKSRTRLGSTAIVKAETARPM*VRASLC
Trigger: GCACAAACTTGCCCTAACCCACATGGGCCTGGCTGT...CTCAGCTTTCACTATAGCAGTGCTTCCCAAACGGGTTCTAGACTTGGGTGTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp CAAACACCCAAGTCTAGAACCCGTTTGGGAAGCACTGCTATAGTGAAAGCTGAGAGGATTTGGCCAGACTaGGCCGTCTCTGCACAGATG +
Preference number: 4 (lower is better)
Translates to: QTPKSRTRLGSTAIVKAERIWPD*AVSAQM
Trigger: CATCTGTGCAGAGACGGCCCAGTCTGGCCAAATCCT...CTCAGCTTTCACTATAGCAGTGCTTCCCAAACGGGTTCTAGACTTGGGTGTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR TCA 90 bp TATATATATATGTATGTATATGCACTGGAAGGGCCACCATGGGCCACGCAGGCCGACAGGTTGATGTTCTaGAGGTCCAGGGAGTACTCG +
Preference number: 4 (lower is better)
Translates to: YIYMYVYALEGPPWATQADRLMF*RSREYS
Trigger: CGAGTACTCCCTGGACCTTCAGAACATCAACCTGTC...GGCCTGCGTGGCCCATGGTGGCCCTTCCAGTGCATATACATACATATATATATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR TCA 90 bp GGTGTCTACGAAAGACTTCACAATAACGAGACAGTCAGGATGACAGGACAGACAGGTTCCATCGGTCCTTaGAGAAGCGCCTCAGACCAA +
Preference number: 4 (lower is better)
Translates to: GVYERLHNNETVRMTGQTGSIGP*RSASDQ
Trigger: TTGGTCTGAGGCGCTTCTTCAAGGACCGATGGAACC...TGTCTGTCCTGTCATCCTGACTGTCTCGTTATTGTGAAGTCTTTCGTAGACACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp TATATATATATGTATGTATATGCACTGGAAGGGCCACCATGGGCCACGCAGGCCTTGCCCTTGAAGAGCTaGACTCCCAGGATGCCAAAG +
Preference number: 4 (lower is better)
Translates to: YIYMYVYALEGPPWATQALPLKS*TPRMPK
Trigger: CTTTGGCATCCTGGGAGTGCAGCTCTTCAAGGGCAA...GGCCTGCGTGGCCCATGGTGGCCCTTCCAGTGCATATACATACATATATATATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp CTGCCTCGAGGTGTCTGCTTGCAGAGTCACACGGTTCAGGGTAAGGGGAGGTTTATATATGTATGTATATaGACTGGAAGGGCCACCATG +
Preference number: 4 (lower is better)
Translates to: LPRGVCLQSHTVQGKGRFIYVCI*TGRATM
Trigger: CATGGTGGCCCTTCCAGTGCATATACATACATATAT...AAACCTCCCCTTACCCTGAACCGTGTGACTCTGCAAGCAGACACCTCGAGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp CAACTAGGAGGGAAGTTCATTCACACCATAGAAACTGTACAGCGACTGAGAGTGGTTTCACGTCAGACCTaGCTAGGACGTGTTCCCTGC +
Preference number: 4 (lower is better)
Translates to: QLGGKFIHTIETVQRLRVVSRQT*LGRVPC
Trigger: GCAGGGAACACGTCCTAGGCAGGTCTGACGTGAAAC...CACTCTCAGTCGCTGTACAGTTTCTATGGTGTGAATGAACTTCCCTCCTAGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp CAGCACAGTGTCCAGGAACAGCCACAGCTCAGCGCCCATATGGGGGATAAAAGGGTTAGGGCAAGTTTGTaGTTTTGTGATAGACACAAG +
Preference number: 4 (lower is better)
Translates to: QHSVQEQPQLSAHMGDKRVRASL*FCDRHK
Trigger: CTTGTGTCTATCACAAAAGCACAAACTTGCCCTAAC...CCTTTTATCCCCCATATGGGCGCTGAGCTGTGGCTGTTCCTGGACACTGTGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp TTGCAAAAAGTCAAGTCTGTCTGCTTCCCTCCAACTGCGAGAGCTCAGGGTCAGCTGTCCAGGCCTTCCTaGAGCTTATCAAACTCTTCT +
Preference number: 4 (lower is better)
Translates to: LQKVKSVCFPPTARAQGQLSRPS*SLSNSS
Trigger: AGAAGAGTTTGATAAGCTCCAGGAAGGCCTGGACAG...CTGACCCTGAGCTCTCGCAGTTGGAGGGAAGCAGACAGACTTGACTTTTTGCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp GGTGTCTACGAAAGACTTCACAATAACGAGACAGTCAGGATGACAGGACAGACAAGGGACATCAGAGCCTaGCCCAGGTTGTCGAAGTTG +
Preference number: 4 (lower is better)
Translates to: GVYERLHNNETVRMTGQTRDIRA*PRLSKL
Trigger: CAACTTCGACAACCTGGGCCAGGCTCTGATGTCCCT...TGTCTGTCCTGTCATCCTGACTGTCTCGTTATTGTGAAGTCTTTCGTAGACACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp TATATATATATGTATGTATATGCACTGGAAGGGCCACCATGGGCCACGCAGGCCACTTGTCCTGGCCAGTaGATCACAGCTTCCCTGGTT +
Preference number: 4 (lower is better)
Translates to: YIYMYVYALEGPPWATQATCPGQ*ITASLV
Trigger: AACCAGGGAAGCTGTGATCCACTGGCCAGGACAAGT...GGCCTGCGTGGCCCATGGTGGCCCTTCCAGTGCATATACATACATATATATATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp CAGCACAGTGTCCAGGAACAGCCACAGCTCAGCGCCCATATGGGGGATAAAAGGAAGAGTATGTGTATCTaGGCTAAAGAGCAGCTTCTA +
Preference number: 4 (lower is better)
Translates to: QHSVQEQPQLSAHMGDKRKSMCI*AKEQLL
Trigger: TAGAAGCTGCTCTTTAGCCCAGATACACATACTCTT...CCTTTTATCCCCCATATGGGCGCTGAGCTGTGGCTGTTCCTGGACACTGTGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR TCA 90 bp CAGCAACTAGGAGGGAAGTTCATTCACACCATAGAAACTGTACAGCGACTGAGATGTAGTTGGACACGGTaGGAAAGATGCGTTCGGTGC +
Preference number: 4 (lower is better)
Translates to: QQLGGKFIHTIETVQRLRCSWTR*ERCVRC
Trigger: GCACCGAACGCATCTTTCTCACCGTGTCCAACTACA...TCTCAGTCGCTGTACAGTTTCTATGGTGTGAATGAACTTCCCTCCTAGTTGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR TCA 90 bp CTGAAGCCCTCGGAGGGGGTCTTAGCAAAGGCAAGGTTATTGCTGAAGTACAGCCTCTGCCAGGAACACTaGTTATTGCACAAAGACAAA +
Preference number: 4 (lower is better)
Translates to: LKPSEGVLAKARLLLKYSLCQEH*LLHKDK
Trigger: TTTGTCTTTGTGCAATAATCAGTGTTCCTGGCAGAG...GCTGTACTTCAGCAATAACCTTGCCTTTGCTAAGACCCCCTCCGAGGGCTTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp CAGCAACTAGGAGGGAAGTTCATTCACACCATAGAAACTGTACAGCGACTGAGACGAGGTAGCACTTCTTaGCAAAAATCCCCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: QQLGGKFIHTIETVQRLRRGSTS*QKSPGP
Trigger: TGGCCCTGGGGATTTTTGGCAAGAAGTGCTACCTCG...TCTCAGTCGCTGTACAGTTTCTATGGTGTGAATGAACTTCCCTCCTAGTTGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp CAAACACCCAAGTCTAGAACCCGTTTGGGAAGCACTGCTATAGTGAAAGCTGAGGTCGAAGAGCCCAAATaGAGCCAGCTTCAGGATCAT +
Preference number: 4 (lower is better)
Translates to: QTPKSRTRLGSTAIVKAEVEEPK*SQLQDH
Trigger: ATGATCCTGAAGCTGGCTGCATTTGGGCTCTTCGAC...CTCAGCTTTCACTATAGCAGTGCTTCCCAAACGGGTTCTAGACTTGGGTGTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp CAACTAGGAGGGAAGTTCATTCACACCATAGAAACTGTACAGCGACTGAGAGTGCTGAAGTACAGCATCTaGAAACTCGTGGCCCCTGCA +
Preference number: 4 (lower is better)
Translates to: QLGGKFIHTIETVQRLRVLKYSI*KLVAPA
Trigger: TGCAGGGGCCACGAGTTTGCAGATGCTGTACTTCAG...CACTCTCAGTCGCTGTACAGTTTCTATGGTGTGAATGAACTTCCCTCCTAGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp GGTGTCTACGAAAGACTTCACAATAACGAGACAGTCAGGATGACAGGACAGACAAGTAGTGGTGGAAGATaGAGCCCGACAGGTTGTCGA +
Preference number: 4 (lower is better)
Translates to: GVYERLHNNETVRMTGQTSSGGR*SPTGCR
Trigger: TCGACAACCTGTCGGGCTCCATCTTCCACCACTACT...TGTCTGTCCTGTCATCCTGACTGTCTCGTTATTGTGAAGTCTTTCGTAGACACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR TCA 90 bp CAACTAGGAGGGAAGTTCATTCACACCATAGAAACTGTACAGCGACTGAGAGTGTGTCCGTGCGGAGGCTaGACTTGCAGCCAAAAATAT +
Preference number: 4 (lower is better)
Translates to: QLGGKFIHTIETVQRLRVCPCGG*TCSQKY
Trigger: ATATTTTTGGCTGCAAGTTCAGCCTCCGCACGGACA...CACTCTCAGTCGCTGTACAGTTTCTATGGTGTGAATGAACTTCCCTCCTAGTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp CTGAAGCCCTCGGAGGGGGTCTTAGCAAAGGCAAGGTTATTGCTGAAGTACAGCATATATGTATGTATATaGACTGGAAGGGCCACCATG +
Preference number: 4 (lower is better)
Translates to: LKPSEGVLAKARLLLKYSIYVCI*TGRATM
Trigger: CATGGTGGCCCTTCCAGTGCATATACATACATATAT...GCTGTACTTCAGCAATAACCTTGCCTTTGCTAAGACCCCCTCCGAGGGCTTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp CAACTAGGAGGGAAGTTCATTCACACCATAGAAACTGTACAGCGACTGAGAGTGTGTATGTATATGCACTaGAAGGGCCACCATGGGCCA +
Preference number: 4 (lower is better)
Translates to: QLGGKFIHTIETVQRLRVCMYMH*KGHHGP
Trigger: TGGCCCATGGTGGCCCTTCCAGTGCATATACATACA...CACTCTCAGTCGCTGTACAGTTTCTATGGTGTGAATGAACTTCCCTCCTAGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp CAGCAACTAGGAGGGAAGTTCATTCACACCATAGAAACTGTACAGCGACTGAGAGGGATGTGTGTGCTCTaGGGTGTCTACGAAAGACTT +
Preference number: 4 (lower is better)
Translates to: QQLGGKFIHTIETVQRLRGMCVL*GVYERL
Trigger: AAGTCTTTCGTAGACACCCCAGAGCACACACATCCC...TCTCAGTCGCTGTACAGTTTCTATGGTGTGAATGAACTTCCCTCCTAGTTGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp CAACTAGGAGGGAAGTTCATTCACACCATAGAAACTGTACAGCGACTGAGAGTGGAGACATCTAACCGGTaGACTAAGGGGATGTGTGTG +
Preference number: 4 (lower is better)
Translates to: QLGGKFIHTIETVQRLRVETSNR*TKGMCV
Trigger: CACACACATCCCCTTAGTCCACCGGTTAGATGTCTC...CACTCTCAGTCGCTGTACAGTTTCTATGGTGTGAATGAACTTCCCTCCTAGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp CTGAAGCCCTCGGAGGGGGTCTTAGCAAAGGCAAGGTTATTGCTGAAGTACAGCAAGAGTATGTGTATCTaGGCTAAAGAGCAGCTTCTA +
Preference number: 4 (lower is better)
Translates to: LKPSEGVLAKARLLLKYSKSMCI*AKEQLL
Trigger: TAGAAGCTGCTCTTTAGCCCAGATACACATACTCTT...GCTGTACTTCAGCAATAACCTTGCCTTTGCTAAGACCCCCTCCGAGGGCTTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR TCA 90 bp TATATATATATGTATGTATATGCACTGGAAGGGCCACCATGGGCCACGCAGGCCCCTCCTTCTTCAAACTaGCTTCATGAAAGTCACTCC +
Preference number: 4 (lower is better)
Translates to: YIYMYVYALEGPPWATQAPPSSN*LHESHS
Trigger: GGAGTGACTTTCATGAAGTCAGTTTGAAGAAGGAGG...GGCCTGCGTGGCCCATGGTGGCCCTTCCAGTGCATATACATACATATATATATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR TCA 90 bp CAAACACCCAAGTCTAGAACCCGTTTGGGAAGCACTGCTATAGTGAAAGCTGAGCCTCCTTCTTCAAACTaGCTTCATGAAAGTCACTCC +
Preference number: 4 (lower is better)
Translates to: QTPKSRTRLGSTAIVKAEPPSSN*LHESHS
Trigger: GGAGTGACTTTCATGAAGTCAGTTTGAAGAAGGAGG...CTCAGCTTTCACTATAGCAGTGCTTCCCAAACGGGTTCTAGACTTGGGTGTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR TCA 90 bp CAAACACCCAAGTCTAGAACCCGTTTGGGAAGCACTGCTATAGTGAAAGCTGAGAGGCAAGGTTATTGCTaGAGTACAGCATCTGCAAAC +
Preference number: 4 (lower is better)
Translates to: QTPKSRTRLGSTAIVKAERQGYC*STASAN
Trigger: GTTTGCAGATGCTGTACTTCAGCAATAACCTTGCCT...CTCAGCTTTCACTATAGCAGTGCTTCCCAAACGGGTTCTAGACTTGGGTGTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp CAGCAACTAGGAGGGAAGTTCATTCACACCATAGAAACTGTACAGCGACTGAGAGTACTCGACCATCCCTaGCATGACGATGAAGAAATC +
Preference number: 4 (lower is better)
Translates to: QQLGGKFIHTIETVQRLRVLDHP*HDDEEI
Trigger: GATTTCTTCATCGTCATGGCAGGGATGGTCGAGTAC...TCTCAGTCGCTGTACAGTTTCTATGGTGTGAATGAACTTCCCTCCTAGTTGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR TCA 90 bp CAGCAACTAGGAGGGAAGTTCATTCACACCATAGAAACTGTACAGCGACTGAGAAAAGGCATTAGTGGCTaGACAACTAACTACCTGAGC +
Preference number: 4 (lower is better)
Translates to: QQLGGKFIHTIETVQRLRKGISG*TTNYLS
Trigger: GCTCAGGTAGTTAGTTGTTCAGCCACTAATGCCTTT...TCTCAGTCGCTGTACAGTTTCTATGGTGTGAATGAACTTCCCTCCTAGTTGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp CAACTAGGAGGGAAGTTCATTCACACCATAGAAACTGTACAGCGACTGAGAGTGAGCAACACGCGGACTTaGAAAAAGTCAAGTCTGTCT +
Preference number: 4 (lower is better)
Translates to: QLGGKFIHTIETVQRLRVSNTRT*KKSSLS
Trigger: AGACAGACTTGACTTTTTGCAAGTCCGCGTGTTGCT...CACTCTCAGTCGCTGTACAGTTTCTATGGTGTGAATGAACTTCCCTCCTAGTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CCA 90 bp GGTGTCTACGAAAGACTTCACAATAACGAGACAGTCAGGATGACAGGACAGACATCCAGAGTGATCACCTaGAAGATGACAATCCAAGCA +
Preference number: 4 (lower is better)
Translates to: GVYERLHNNETVRMTGQTSRVIT*KMTIQA
Trigger: TGCTTGGATTGTCATCTTCCAGGTGATCACTCTGGA...TGTCTGTCCTGTCATCCTGACTGTCTCGTTATTGTGAAGTCTTTCGTAGACACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
3UTR CAA 72 bp AACTCTTCAAATCAAACACCCAAGTCTAGAACCCGTTaGGGAAGCACTGCTATAGTGAAAGCTGAGCTGCAG +
Preference number: 4 (lower is better)
Translates to: NSSNQTPKSRTR*GSTAIVKAELQ
Trigger: CTGCAGCTCAGCTTTCACTATAGCAGTGCTTCCCAAACGGGTTCTAGACTTGGGTGTTTGATTTGAAGAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR GCA 90 bp TATATATATATGTATGTATATGCACTGGAAGGGCCACCATGGGCCACGCAGGCCGTTAGGGCAAGTTTGTaGTTTTGTGATAGACACAAG +
Preference number: 4 (lower is better)
Translates to: YIYMYVYALEGPPWATQAVRASL*FCDRHK
Trigger: CTTGTGTCTATCACAAAAGCACAAACTTGCCCTAAC...GGCCTGCGTGGCCCATGGTGGCCCTTCCAGTGCATATACATACATATATATATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS GCA 90 bp CACCAGCGGAGCTCCCGGAGCCCGAGCCCTCCTGGCCCGAGTCGGTaGTGCCCAGGCCCGAGGGCCGCCGGCCGTCCTCATGCTGGCAGC +
Preference number: 5 (lower is better)
Translates to: HQRSSRSPSPPGPSR*CPGPRAAGRPHAGS
Trigger: GCTGCCAGCATGAGGACGGCCGGCGGCCCTCGGGCCTGGGCAGCACCGACTCGGGCCAGGAGGGCTCGGGCTCCGGGAGCTCCGCTGGTG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401624.5
ENST00000402142.4
ENST00000404898.5
ENST00000407673.5
CDS GCA 90 bp GGGCAGAAGAGGGAGGTGAGCGAGAGGCTGCTGAGGGTCTCCGAGTaGTCGCTGCCCGCGCCCCCGCCGCCCGCGCCACCGCGGCCCTCC +
Preference number: 5 (lower is better)
Translates to: GQKREVSERLLRVSE*SLPAPPPPAPPRPS
Trigger: GGAGGGCCGCGGTGGCGCGGGCGGCGGGGGCGCGGGCAGCGAGCACTCGGAGACCCTCAGCAGCCTCTCGCTCACCTCCCTCTTCTGCCC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS GCA 90 bp CAGCGGAGCTCCCGGAGCCCGAGCCCTCCTGGCCCGAGTCGGTGCTaGCCAGGCCCGAGGGCCGCCGGCCGTCCTCATGCTGGCAGCAAG +
Preference number: 5 (lower is better)
Translates to: QRSSRSPSPPGPSRC*PGPRAAGRPHAGSK
Trigger: CTTGCTGCCAGCATGAGGACGGCCGGCGGCCCTCGGGCCTGGGCAGCACCGACTCGGGCCAGGAGGGCTCGGGCTCCGGGAGCTCCGCTG
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401624.5
ENST00000402142.4
ENST00000404898.5
ENST00000407673.5
CDS GCA 90 bp CCCGAGTCGGTGCTGCCCAGGCCCGAGGGCCGCCGGCCGTCCTCATaGTGGCAGCAAGGGCAGCTGGCGGGATCGGAAGCCAGCGTGGCG +
Preference number: 5 (lower is better)
Translates to: PESVLPRPEGRRPSS*WQQGQLAGSEASVA
Trigger: CGCCACGCTGGCTTCCGATCCCGCCAGCTGCCCTTGCTGCCAGCATGAGGACGGCCGGCGGCCCTCGGGCCTGGGCAGCACCGACTCGGG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401624.5
ENST00000402142.4
ENST00000404898.5
ENST00000407673.5
CDS CCA 90 bp GGCCCGAGGGCCGCCGGCCGTCCTCATGCTGGCAGCAAGGGCAGCTaGCGGGATCGGAAGCCAGCGTGGCGGGGATGGGCTGCACCAGGG +
Preference number: 5 (lower is better)
Translates to: GPRAAGRPHAGSKGS*RDRKPAWRGWAAPG
Trigger: CCCTGGTGCAGCCCATCCCCGCCACGCTGGCTTCCGATCCCGCCAGCTGCCCTTGCTGCCAGCATGAGGACGGCCGGCGGCCCTCGGGCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401624.5
ENST00000402142.4
ENST00000404898.5
ENST00000407673.5
CDS CCA 90 bp GAGTCGGTGCTGCCCAGGCCCGAGGGCCGCCGGCCGTCCTCATGCTaGCAGCAAGGGCAGCTGGCGGGATCGGAAGCCAGCGTGGCGGGG +
Preference number: 5 (lower is better)
Translates to: ESVLPRPEGRRPSSC*QQGQLAGSEASVAG
Trigger: CCCCGCCACGCTGGCTTCCGATCCCGCCAGCTGCCCTTGCTGCCAGCATGAGGACGGCCGGCGGCCCTCGGGCCTGGGCAGCACCGACTC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401624.5
ENST00000402142.4
ENST00000404898.5
ENST00000407673.5
CDS CCA 90 bp GGGCACGCCGGGGGCTGTCGCTCAGGGTCAGGCTGTCCTCGAGCGTaGTCTGCAGGCTGCCCGCGGAGCTGCTGGGGCTGGCGTCCAGCG +
Preference number: 5 (lower is better)
Translates to: GHAGGCRSGSGCPRA*SAGCPRSCWGWRPA
Trigger: CGCTGGACGCCAGCCCCAGCAGCTCCGCGGGCAGCCTGCAGACCACGCTCGAGGACAGCCTGACCCTGAGCGACAGCCCCCGGCGTGCCC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS GCA 90 bp GGGTCAGGCTGTCCTCGAGCGTGGTCTGCAGGCTGCCCGCGGAGCTaGTGGGGCTGGCGTCCAGCGACGTGTCGCTCCCGGTGGCCTGCC +
Preference number: 5 (lower is better)
Translates to: GSGCPRAWSAGCPRS*WGWRPATCRSRWPA
Trigger: GGCAGGCCACCGGGAGCGACACGTCGCTGGACGCCAGCCCCAGCAGCTCCGCGGGCAGCCTGCAGACCACGCTCGAGGACAGCCTGACCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS GCA 90 bp CGCCGGGGGCTGTCGCTCAGGGTCAGGCTGTCCTCGAGCGTGGTCTaGAGGCTGCCCGCGGAGCTGCTGGGGCTGGCGTCCAGCGACGTG +
Preference number: 5 (lower is better)
Translates to: RRGLSLRVRLSSSVV*RLPAELLGLASSDV
Trigger: CACGTCGCTGGACGCCAGCCCCAGCAGCTCCGCGGGCAGCCTGCAGACCACGCTCGAGGACAGCCTGACCCTGAGCGACAGCCCCCGGCG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS CCA 90 bp TGTCCTCGAGCGTGGTCTGCAGGCTGCCCGCGGAGCTGCTGGGGCTaGCGTCCAGCGACGTGTCGCTCCCGGTGGCCTGCCGGAGGAGGG +
Preference number: 5 (lower is better)
Translates to: CPRAWSAGCPRSCWG*RPATCRSRWPAGGG
Trigger: CCCTCCTCCGGCAGGCCACCGGGAGCGACACGTCGCTGGACGCCAGCCCCAGCAGCTCCGCGGGCAGCCTGCAGACCACGCTCGAGGACA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS CCA 90 bp GCTGCTGGTGCTGCTGAACTTCCTGGCGGGCGTGAGGCCGGGGGCTaGCGGCGGGGGCGGCGGGCAGAAGAGGGAGGTGAGCGAGAGGCT +
Preference number: 5 (lower is better)
Translates to: AAGAAELPGGREAGG*RRGRRAEEGGEREA
Trigger: AGCCTCTCGCTCACCTCCCTCTTCTGCCCGCCGCCCCCGCCGCCAGCCCCCGGCCTCACGCCCGCCAGGAAGTTCAGCAGCACCAGCAGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS CCA 90 bp TCAGGCTGTCCTCGAGCGTGGTCTGCAGGCTGCCCGCGGAGCTGCTaGGGCTGGCGTCCAGCGACGTGTCGCTCCCGGTGGCCTGCCGGA +
Preference number: 5 (lower is better)
Translates to: SGCPRAWSAGCPRSC*GWRPATCRSRWPAG
Trigger: TCCGGCAGGCCACCGGGAGCGACACGTCGCTGGACGCCAGCCCCAGCAGCTCCGCGGGCAGCCTGCAGACCACGCTCGAGGACAGCCTGA
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS CCA 90 bp CCTCATGCTGGCAGCAAGGGCAGCTGGCGGGATCGGAAGCCAGCGTaGCGGGGATGGGCTGCACCAGGGTGTGGGGCGTCGCATCCAGGG +
Preference number: 5 (lower is better)
Translates to: PHAGSKGSWRDRKPA*RGWAAPGCGASHPG
Trigger: CCCTGGATGCGACGCCCCACACCCTGGTGCAGCCCATCCCCGCCACGCTGGCTTCCGATCCCGCCAGCTGCCCTTGCTGCCAGCATGAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000401624.5
ENST00000402142.4
ENST00000404898.5
ENST00000407673.5
CDS-3UTR CAA 90 bp GCCCCTCCAAGCAAGCCACTGCCGGCTCAGTCTCCCGCACCCTTCCTCTGCAGGCCCAGGGCGCGGCGCTaGGCCTTGCGCAGGATGTGG +
Preference number: 5 (lower is better)
Translates to: APPSKPLPAQSPAPFLCRPRARR*ALRRMW
Trigger: CCACATCCTGCGCAAGGCCAAGCGCCGCGCCCTGGG...CCTGCAGAGGAAGGGTGCGGGAGACTGAGCCGGCAGTGGCTTGCTTGGAGGGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CAA 90 bp GCACAGATGCCAAGGTGCCTGCCCACCACCGCTCTACGGAGCCCAGCAGACAGCGCACCCTTGTGGGGGTaGGCGCTGCCCGTGCGGCAC +
Preference number: 5 (lower is better)
Translates to: AQMPRCLPTTALRSPADSAPLWG*ALPVRH
Trigger: GTGCCGCACGGGCAGCGCCAACCCCCACAAGGGTGC...GCTGTCTGCTGGGCTCCGTAGAGCGGTGGTGGGCAGGCACCTTGGCATCTGTGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CAA 90 bp GAGGGCTGTGGCCCTGGCCAATCCAGTACGGGGGACCCTGCAGCCCGAGGCTTCAGGACCCCCAAGATCTaGGCTCCCCCGGCTGAGGCC +
Preference number: 5 (lower is better)
Translates to: EGCGPGQSSTGDPAARGFRTPKI*APPAEA
Trigger: GGCCTCAGCCGGGGGAGCCAAGATCTTGGGGGTCCT...GAAGCCTCGGGCTGCAGGGTCCCCCGTACTGGATTGGCCAGGGCCACAGCCCTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR CAA 90 bp GAGGGCTGTGGCCCTGGCCAATCCAGTACGGGGGACCCTGCAGCCCGAGGCTTCCGGCAGGCAGGGAGTTaGTGTCCTGCCCGCCAGAGC +
Preference number: 5 (lower is better)
Translates to: EGCGPGQSSTGDPAARGFRQAGS*CPARQS
Trigger: GCTCTGGCGGGCAGGACACAAACTCCCTGCCTGCCG...GAAGCCTCGGGCTGCAGGGTCCCCCGTACTGGATTGGCCAGGGCCACAGCCCTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS CCA 90 bp GCGGGATCGGAAGCCAGCGTGGCGGGGATGGGCTGCACCAGGGTGTaGGGCGTCGCATCCAGGGGGCTATGTTGCGGGCACAGCTCTCTT +
Preference number: 5 (lower is better)
Translates to: AGSEASVAGMGCTRV*GVASRGLCCGHSSL
Trigger: AAGAGAGCTGTGCCCGCAACATAGCCCCCTGGATGCGACGCCCCACACCCTGGTGCAGCCCATCCCCGCCACGCTGGCTTCCGATCCCGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000401624.5
ENST00000402142.4
CDS-3UTR CAA 90 bp ATCACAGGCCTCTTCCAGACCCGCCTTGGGGTCCTCCCCACACTCTGCTGTCCCGCACCCTTGTGGGGGTaGGCGCTGCCCGTGCGGCAC +
Preference number: 5 (lower is better)
Translates to: ITGLFQTRLGVLPTLCCPAPLWG*ALPVRH
Trigger: GTGCCGCACGGGCAGCGCCAACCCCCACAAGGGTGC...GGGACAGCAGAGTGTGGGGAGGACCCCAAGGCGGGTCTGGAAGAGGCCTGTGAT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR CAA 90 bp GCCCCTCCAAGCAAGCCACTGCCGGCTCAGTCTCCCGCACCCTTCCTCTGCAGGGCGCGGCGCTTGGCCTaGCGCAGGATGTGGCAGACA +
Preference number: 5 (lower is better)
Translates to: APPSKPLPAQSPAPFLCRARRLA*RRMWQT
Trigger: TGTCTGCCACATCCTGCGCAAGGCCAAGCGCCGCGC...CCTGCAGAGGAAGGGTGCGGGAGACTGAGCCGGCAGTGGCTTGCTTGGAGGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CAA 90 bp CGTTCCCAAACCCCCTTGCACGGTGGTGCCCTCGGCCTTTGGTTGGGTCCTTCCCCCAGGGCGCGGCGCTaGGCCTTGCGCAGGATGTGG +
Preference number: 5 (lower is better)
Translates to: RSQTPLHGGALGLWLGPSPRARR*ALRRMW
Trigger: CCACATCCTGCGCAAGGCCAAGCGCCGCGCCCTGGG...GGAAGGACCCAACCAAAGGCCGAGGGCACCACCGTGCAAGGGGGTTTGGGAACG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR CAA 90 bp GAGGCTCTCTGGAGCGGGCAGTGTTGGGCTTGGACCGAGCCATCCCCACAGGTCACGATGCCGCGCAGCTaGGCTCGCGTCTCCCGCCAC +
Preference number: 5 (lower is better)
Translates to: EALWSGQCWAWTEPSPQVTMPRS*ARVSRH
Trigger: GTGGCGGGAGACGCGAGCCAAGCTGCGCGGCATCGT...GACCTGTGGGGATGGCTCGGTCCAAGCCCAACACTGCCCGCTCCAGAGAGCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS CCA 90 bp GGCGCCGGCTCTGCAGGGCCTGGTAGAGGCCCAGGGCGCGGCGCTTaGCCTTGCGCAGGATGTGGCAGACATACTGGAAGATCTCCTCGT +
Preference number: 5 (lower is better)
Translates to: GAGSAGPGRGPGRGA*PCAGCGRHTGRSPR
Trigger: ACGAGGAGATCTTCCAGTATGTCTGCCACATCCTGCGCAAGGCCAAGCGCCGCGCCCTGGGCCTCTACCAGGCCCTGCAGAGCCGGCGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401624.5
ENST00000402142.4
ENST00000404898.5
ENST00000407673.5
CDS-3UTR CAA 90 bp ATCAAGCCCCCACTCACACCCACCCAGAGCACCCAGGGTGTCCTCCCCACTGCCGCGCGGCGCTTGGCCTaGCGCAGGATGTGGCAGACA +
Preference number: 5 (lower is better)
Translates to: IKPPLTPTQSTQGVLPTAARRLA*RRMWQT
Trigger: TGTCTGCCACATCCTGCGCAAGGCCAAGCGCCGCGC...GGCAGTGGGGAGGACACCCTGGGTGCTCTGGGTGGGTGTGAGTGGGGGCTTGAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR CAA 90 bp GAGGGCTGTGGCCCTGGCCAATCCAGTACGGGGGACCCTGCAGCCCGAGGCTTCTCCTCCTGCGCCTCCTaGTTGCTGTCGTCCAGGTGC +
Preference number: 5 (lower is better)
Translates to: EGCGPGQSSTGDPAARGFSSCAS*LLSSRC
Trigger: GCACCTGGACGACAGCAACAAGGAGGCGCAGGAGGA...GAAGCCTCGGGCTGCAGGGTCCCCCGTACTGGATTGGCCAGGGCCACAGCCCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR CAA 90 bp GAGGCTCTCTGGAGCGGGCAGTGTTGGGCTTGGACCGAGCCATCCCCACAGGTCCAAACGGGGCTGGGGTaGGCCCTGGAAGCGGAAGGC +
Preference number: 5 (lower is better)
Translates to: EALWSGQCWAWTEPSPQVQTGLG*ALEAEG
Trigger: GCCTTCCGCTTCCAGGGCCAACCCCAGCCCCGTTTG...GACCTGTGGGGATGGCTCGGTCCAAGCCCAACACTGCCCGCTCCAGAGAGCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS TCA 90 bp GTCGCTCCCGGTGGCCTGCCGGAGGAGGGTACAGTTGACCCTTGGTaGCCGCAGAGATGCCCAGGAGCCCTGCAGCGCAATCTTGGGGAG +
Preference number: 5 (lower is better)
Translates to: VAPGGLPEEGTVDPW*PQRCPGALQRNLGE
Trigger: CTCCCCAAGATTGCGCTGCAGGGCTCCTGGGCATCTCTGCGGTCACCAAGGGTCAACTGTACCCTCCTCCGGCAGGCCACCGGGAGCGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CAA 90 bp ACCCCAGCGTTCCCAAACCCCCTTGCACGGTGGTGCCCTCGGCCTTTGGTTGGGTCCACCGAGTCCCTGTaGTCGAGGGACAGCGTCCGG +
Preference number: 5 (lower is better)
Translates to: TPAFPNPLARWCPRPLVGSTESL*SRDSVR
Trigger: CCGGACGCTGTCCCTCGACAACAGGGACTCGGTGGA...CCCAACCAAAGGCCGAGGGCACCACCGTGCAAGGGGGTTTGGGAACGCTGGGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR CAA 90 bp GGCCAGAATCCCAGAGCATCAGACAAAAGCCCCGTCCAGGCCCTGGCCCACCTCAGGACCCCCAAGATCTaGGCTCCCCCGGCTGAGGCC +
Preference number: 5 (lower is better)
Translates to: GQNPRASDKSPVQALAHLRTPKI*APPAEA
Trigger: GGCCTCAGCCGGGGGAGCCAAGATCTTGGGGGTCCT...GAGGTGGGCCAGGGCCTGGACGGGGCTTTTGTCTGATGCTCTGGGATTCTGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CAA 90 bp GCACAGATGCCAAGGTGCCTGCCCACCACCGCTCTACGGAGCCCAGCAGACAGCCCTCATCTCTTCCTCTaGCTGGCGGCGTCTCCCGGC +
Preference number: 5 (lower is better)
Translates to: AQMPRCLPTTALRSPADSPHLFL*LAASPG
Trigger: GCCGGGAGACGCCGCCAGCAAGAGGAAGAGATGAGG...GCTGTCTGCTGGGCTCCGTAGAGCGGTGGTGGGCAGGCACCTTGGCATCTGTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CAA 90 bp CAAACCCCCTTGCACGGTGGTGCCCTCGGCCTTTGGTTGGGTCCTTCCCCTCCCGCCCTCGGCCTTTGGTaGGGTCCTTCCCCTCCCAGT +
Preference number: 5 (lower is better)
Translates to: QTPLHGGALGLWLGPSPPALGLW*GPSPPS
Trigger: ACTGGGAGGGGAAGGACCCAACCAAAGGCCGAGGGC...GGGAGGGGAAGGACCCAACCAAAGGCCGAGGGCACCACCGTGCAAGGGGGTTTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS GCA 90 bp TGCGCGGTGAGCACGAAGCTCACGAAGTACAGCGGCGACACAAACTaGAGGCTGCTCAGGCAGCTGCGCTCGTCGTGGGTGCAGTCCCGC +
Preference number: 5 (lower is better)
Translates to: CAVSTKLTKYSGDTN*RLLRQLRSSWVQSR
Trigger: GCGGGACTGCACCCACGACGAGCGCAGCTGCCTGAGCAGCCTGCAGTTTGTGTCGCCGCTGTACTTCGTGAGCTTCGTGCTCACCGCGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401624.5
ENST00000402142.4
ENST00000404898.5
ENST00000407673.5
CDS-3UTR CAA 90 bp GAGTTTGTGTCCTGCCCGCCAGAGCACACAGCCTGGTGTGACGGGTCAGACAGTACGATGCCGCGCAGCTaGGCTCGCGTCTCCCGCCAC +
Preference number: 5 (lower is better)
Translates to: EFVSCPPEHTAWCDGSDSTMPRS*ARVSRH
Trigger: GTGGCGGGAGACGCGAGCCAAGCTGCGCGGCATCGT...ACTGTCTGACCCGTCACACCAGGCTGTGTGCTCTGGCGGGCAGGACACAAACTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR CAA 90 bp GCCCCTCCAAGCAAGCCACTGCCGGCTCAGTCTCCCGCACCCTTCCTCTGCAGGCAGATCTCCAGGATGTaGGTCAGCTCCTCCGGCTGC +
Preference number: 5 (lower is better)
Translates to: APPSKPLPAQSPAPFLCRQISRM*VSSSGC
Trigger: GCAGCCGGAGGAGCTGACCAACATCCTGGAGATCTG...CCTGCAGAGGAAGGGTGCGGGAGACTGAGCCGGCAGTGGCTTGCTTGGAGGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CAA 90 bp CTCCAGTCTCAGCGTCACCCCAGCGTTCCCAAACCCCCTTGCACGGTGGTGCCCGGGATTGGGCAGAGCTaGGGATCTCCGCTGCTGTCC +
Preference number: 5 (lower is better)
Translates to: LQSQRHPSVPKPPCTVVPGIGQS*GSPLLS
Trigger: GGACAGCAGCGGAGATCCCAAGCTCTGCCCAATCCC...GGGCACCACCGTGCAAGGGGGTTTGGGAACGCTGGGGTGACGCTGAGACTGGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR CAA 90 bp GCAGGGAGTTTGTGTCCTGCCCGCCAGAGCACACAGCCTGGTGTGACGGGTCAGGGGTCCAGGTGCCCATaGGGGGTCATGGGGATTGGG +
Preference number: 5 (lower is better)
Translates to: AGSLCPARQSTQPGVTGQGSRCP*GVMGIG
Trigger: CCCAATCCCCATGACCCCCAATGGGCACCTGGACCC...CTGACCCGTCACACCAGGCTGTGTGCTCTGGCGGGCAGGACACAAACTCCCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR CAA 90 bp GGCCAGAATCCCAGAGCATCAGACAAAAGCCCCGTCCAGGCCCTGGCCCACCTCGGGTCCAGGTGCCCATaGGGGGTCATGGGGATTGGG +
Preference number: 5 (lower is better)
Translates to: GQNPRASDKSPVQALAHLGSRCP*GVMGIG
Trigger: CCCAATCCCCATGACCCCCAATGGGCACCTGGACCC...GAGGTGGGCCAGGGCCTGGACGGGGCTTTTGTCTGATGCTCTGGGATTCTGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CAA 90 bp ATCAAGCCCCCACTCACACCCACCCAGAGCACCCAGGGTGTCCTCCCCACTGCCGAGCGGTTGGTGATGTaGCGGGTGTCCACGCCCAGA +
Preference number: 5 (lower is better)
Translates to: IKPPLTPTQSTQGVLPTAERLVM*RVSTPR
Trigger: TCTGGGCGTGGACACCCGCAACATCACCAACCGCTC...GGCAGTGGGGAGGACACCCTGGGTGCTCTGGGTGGGTGTGAGTGGGGGCTTGAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR CAA 90 bp CTCCAGTCTCAGCGTCACCCCAGCGTTCCCAAACCCCCTTGCACGGTGGTGCCCGGGTCCAGCTCACCCTaGCTGTCTTTGCGGCCAGGT +
Preference number: 5 (lower is better)
Translates to: LQSQRHPSVPKPPCTVVPGSSSP*LSLRPG
Trigger: ACCTGGCCGCAAAGACAGCAAGGGTGAGCTGGACCC...GGGCACCACCGTGCAAGGGGGTTTGGGAACGCTGGGGTGACGCTGAGACTGGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR CAA 90 bp CGGGTCAGACAGTCACCCAGTGAATCAACTGCACTCACTGTGGGAGCCGGCCCGCGTTCCCAAACCCCCTaGCACGGTGGTGCCCTCGGC +
Preference number: 5 (lower is better)
Translates to: RVRQSPSESTALTVGAGPRSQTP*HGGALG
Trigger: GCCGAGGGCACCACCGTGCAAGGGGGTTTGGGAACG...CGGGCCGGCTCCCACAGTGAGTGCAGTTGATTCACTGGGTGACTGTCTGACCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR CAA 90 bp ACCCCAGCGTTCCCAAACCCCCTTGCACGGTGGTGCCCTCGGCCTTTGGTTGGGTCTTCCAGACCCGCCTaGGGGTCCTCCCCACACTCT +
Preference number: 5 (lower is better)
Translates to: TPAFPNPLARWCPRPLVGSSRPA*GSSPHS
Trigger: AGAGTGTGGGGAGGACCCCAAGGCGGGTCTGGAAGA...CCCAACCAAAGGCCGAGGGCACCACCGTGCAAGGGGGTTTGGGAACGCTGGGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS TCA 90 bp CGCAGGCAGAAGAAGGCAATAGGCGCCAGGTCTGGGTGTGGGACATaGGGATCAGCTCCATCCAGAGGCTCCTCCAGGCCTGGCGGGGAG +
Preference number: 5 (lower is better)
Translates to: RRQKKAIGARSGCGT*GSAPSRGSSRPGGE
Trigger: CTCCCCGCCAGGCCTGGAGGAGCCTCTGGATGGAGCTGATCCTCATGTCCCACACCCAGACCTGGCGCCTATTGCCTTCTTCTGCCTGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401624.5
ENST00000402142.4
ENST00000404898.5
ENST00000407673.5
CDS TCA 90 bp GGGAGGTGTCGGTACCTGCCGGAGGAGGGTACAGTTGACCCTTGGTaGCCGCAGAGATGCCCAGGAGCCCTGCAGCGCAATCTTGGGGAG +
Preference number: 5 (lower is better)
Translates to: GRCRYLPEEGTVDPW*PQRCPGALQRNLGE
Trigger: CTCCCCAAGATTGCGCTGCAGGGCTCCTGGGCATCTCTGCGGTCACCAAGGGTCAACTGTACCCTCCTCCGGCAGGTACCGACACCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000401624.5
ENST00000407673.5
CDS CCA 90 bp TGGGCCTTTCTGGCTGGCAGACACTGCAGGGTGGAAGAACTCGGCTaGCATGGGCAGGAGAGGGCTGGAGGCATCCGGGGAGAAGGGACT +
Preference number: 5 (lower is better)
Translates to: WAFLAGRHCRVEELG*HGQERAGGIRGEGT
Trigger: AGTCCCTTCTCCCCGGATGCCTCCAGCCCTCTCCTGCCCATGCCAGCCGAGTTCTTCCACCCTGCAGTGTCTGCCAGCCAGAAAGGCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401624.5
ENST00000402142.4
ENST00000404898.5
ENST00000407673.5
CDS-3UTR CAA 90 bp ATCAAGCCCCCACTCACACCCACCCAGAGCACCCAGGGTGTCCTCCCCACTGCCCAGCCCATTATCCCATaGTCGCCCGACAGGGAGCAG +
Preference number: 5 (lower is better)
Translates to: IKPPLTPTQSTQGVLPTAQPIIP*SPDREQ
Trigger: CTGCTCCCTGTCGGGCGACAATGGGATAATGGGCTG...GGCAGTGGGGAGGACACCCTGGGTGCTCTGGGTGGGTGTGAGTGGGGGCTTGAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR CAA 90 bp GCCATGGGCCAGCAGGTACCAGCGCCATCAGCAACTAGGAGGGAAGTTCATTCAGCACCCTTGTGGGGGTaGGCGCTGCCCGTGCGGCAC +
Preference number: 5 (lower is better)
Translates to: AMGQQVPAPSATRREVHSAPLWG*ALPVRH
Trigger: GTGCCGCACGGGCAGCGCCAACCCCCACAAGGGTGC...TGAATGAACTTCCCTCCTAGTTGCTGATGGCGCTGGTACCTGCTGGCCCATGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CAA 90 bp TGTCCTGGCCAGTGGATCACAGCTTCCCTGGTTCTCATCTCTGTCACCCACAGGCCCAGGGCGCGGCGCTaGGCCTTGCGCAGGATGTGG +
Preference number: 5 (lower is better)
Translates to: CPGQWITASLVLISVTHRPRARR*ALRRMW
Trigger: CCACATCCTGCGCAAGGCCAAGCGCCGCGCCCTGGG...CCTGTGGGTGACAGAGATGAGAACCAGGGAAGCTGTGATCCACTGGCCAGGACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CAA 90 bp GGCCAGAATCCCAGAGCATCAGACAAAAGCCCCGTCCAGGCCCTGGCCCACCTCGGGATTGGGCAGAGCTaGGGATCTCCGCTGCTGTCC +
Preference number: 5 (lower is better)
Translates to: GQNPRASDKSPVQALAHLGIGQS*GSPLLS
Trigger: GGACAGCAGCGGAGATCCCAAGCTCTGCCCAATCCC...GAGGTGGGCCAGGGCCTGGACGGGGCTTTTGTCTGATGCTCTGGGATTCTGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CAA 90 bp CTGAATTGCACCTCTTCTCCAGGGCCTGGTGCCCTCAGAGGCCTGAGGGTCCTCGGGTCCAGGTGCCCATaGGGGGTCATGGGGATTGGG +
Preference number: 5 (lower is better)
Translates to: LNCTSSPGPGALRGLRVLGSRCP*GVMGIG
Trigger: CCCAATCCCCATGACCCCCAATGGGCACCTGGACCC...GAGGACCCTCAGGCCTCTGAGGGCACCAGGCCCTGGAGAAGAGGTGCAATTCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CAA 90 bp AGGGAGTTTGTGTCCTGCCCGCCAGAGCACACAGCCTGGTGTGACGGGTCAGACCTGGGCATCCTGCCATaGCAGTCCTCATGCCCGGGG +
Preference number: 5 (lower is better)
Translates to: REFVSCPPEHTAWCDGSDLGILP*QSSCPG
Trigger: CCCCGGGCATGAGGACTGCAATGGCAGGATGCCCAG...GTCTGACCCGTCACACCAGGCTGTGTGCTCTGGCGGGCAGGACACAAACTCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR CAA 90 bp ATCACAGGCCTCTTCCAGACCCGCCTTGGGGTCCTCCCCACACTCTGCTGTCCCCCGCGGTCGCCCATCTaGGTGAAGACGTCTTTGGCG +
Preference number: 5 (lower is better)
Translates to: ITGLFQTRLGVLPTLCCPPRSPI*VKTSLA
Trigger: CGCCAAAGACGTCTTCACCAAGATGGGCGACCGCGG...GGGACAGCAGAGTGTGGGGAGGACCCCAAGGCGGGTCTGGAAGAGGCCTGTGAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR CAA 90 bp GGCCAGAATCCCAGAGCATCAGACAAAAGCCCCGTCCAGGCCCTGGCCCACCTCCCGCGGTCGCCCATCTaGGTGAAGACGTCTTTGGCG +
Preference number: 5 (lower is better)
Translates to: GQNPRASDKSPVQALAHLPRSPI*VKTSLA
Trigger: CGCCAAAGACGTCTTCACCAAGATGGGCGACCGCGG...GAGGTGGGCCAGGGCCTGGACGGGGCTTTTGTCTGATGCTCTGGGATTCTGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CAA 90 bp CCCTTGCACGGTGGTGCCCTCGGCCTTTGGTTGGGTCCTTCCCCTCCCAGTCCCCAGGACCGGACAGGGTaGAATGGGATCTCCTCCATC +
Preference number: 5 (lower is better)
Translates to: PLHGGALGLWLGPSPPSPQDRTG*NGISSI
Trigger: GATGGAGGAGATCCCATTCAACCCTGTCCGGTCCTG...GGGACTGGGAGGGGAAGGACCCAACCAAAGGCCGAGGGCACCACCGTGCAAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR CAA 90 bp GCCCCTCCAAGCAAGCCACTGCCGGCTCAGTCTCCCGCACCCTTCCTCTGCAGGCAGGACCGGACAGGGTaGAATGGGATCTCCTCCATC +
Preference number: 5 (lower is better)
Translates to: APPSKPLPAQSPAPFLCRQDRTG*NGISSI
Trigger: GATGGAGGAGATCCCATTCAACCCTGTCCGGTCCTG...CCTGCAGAGGAAGGGTGCGGGAGACTGAGCCGGCAGTGGCTTGCTTGGAGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CAA 90 bp ACCCCAGCGTTCCCAAACCCCCTTGCACGGTGGTGCCCTCGGCCTTTGGTTGGGCGGAGGAGGGTACAGTaGACCCTTGGTGACCGCAGA +
Preference number: 5 (lower is better)
Translates to: TPAFPNPLARWCPRPLVGRRRVQ*TLGDRR
Trigger: TCTGCGGTCACCAAGGGTCAACTGTACCCTCCTCCG...CCCAACCAAAGGCCGAGGGCACCACCGTGCAAGGGGGTTTGGGAACGCTGGGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR CAA 90 bp GGCCGTCTCTGCACAGATGCCAAGGTGCCTGCCCACCACCGCTCTACGGAGCCCCACACACACCCTGAATaGCACCTCTTCTCCAGGGCC +
Preference number: 5 (lower is better)
Translates to: GRLCTDAKVPAHHRSTEPHTHPE*HLFSRA
Trigger: GGCCCTGGAGAAGAGGTGCAATTCAGGGTGTGTGTG...GGGCTCCGTAGAGCGGTGGTGGGCAGGCACCTTGGCATCTGTGCAGAGACGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CAA 90 bp GGCCAGAATCCCAGAGCATCAGACAAAAGCCCCGTCCAGGCCCTGGCCCACCTCCAGAGCTGCTTTGCCTaGAACCTACTGGGGCGGGGG +
Preference number: 5 (lower is better)
Translates to: GQNPRASDKSPVQALAHLQSCFA*NLLGRG
Trigger: CCCCCGCCCCAGTAGGTTCAAGGCAAAGCAGCTCTG...GAGGTGGGCCAGGGCCTGGACGGGGCTTTTGTCTGATGCTCTGGGATTCTGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CAA 90 bp GAGGCTCTCTGGAGCGGGCAGTGTTGGGCTTGGACCGAGCCATCCCCACAGGTCGGAAGGAAGGGCCCTTaGCCCAACCCTCACCCATGT +
Preference number: 5 (lower is better)
Translates to: EALWSGQCWAWTEPSPQVGRKGP*PNPHPC
Trigger: ACATGGGTGAGGGTTGGGCAAAGGGCCCTTCCTTCC...GACCTGTGGGGATGGCTCGGTCCAAGCCCAACACTGCCCGCTCCAGAGAGCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS CCA 90 bp GGCAGGCTGTGGGGTCCTCGAGACTCAGGTCGTCACCCAGCAGGATaGACGAGGACCTGTCTGAGTTCAGGGAGAAGGCCTCCGTCTCAG +
Preference number: 5 (lower is better)
Translates to: GRLWGPRDSGRHPAG*TRTCLSSGRRPPSQ
Trigger: CTGAGACGGAGGCCTTCTCCCTGAACTCAGACAGGTCCTCGTCCATCCTGCTGGGTGACGACCTGAGTCTCGAGGACCCCACAGCCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401624.5
ENST00000402142.4
ENST00000404898.5
ENST00000407673.5
CDS CCA 90 bp ACACTGCAGGGTGGAAGAACTCGGCTGGCATGGGCAGGAGAGGGCTaGAGGCATCCGGGGAGAAGGGACTTGGGGGTGCTTGACTGCTGT +
Preference number: 5 (lower is better)
Translates to: TLQGGRTRLAWAGEG*RHPGRRDLGVLDCC
Trigger: ACAGCAGTCAAGCACCCCCAAGTCCCTTCTCCCCGGATGCCTCCAGCCCTCTCCTGCCCATGCCAGCCGAGTTCTTCCACCCTGCAGTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000401624.5
ENST00000402142.4
ENST00000404898.5
ENST00000407673.5
CDS-3UTR CAA 90 bp CTGCCTCGAGGTGTCTGCTTGCAGAGTCACACGGTTCAGGGTAAGGGGAGGTTTACGATGCCGCGCAGCTaGGCTCGCGTCTCCCGCCAC +
Preference number: 5 (lower is better)
Translates to: LPRGVCLQSHTVQGKGRFTMPRS*ARVSRH
Trigger: GTGGCGGGAGACGCGAGCCAAGCTGCGCGGCATCGT...AAACCTCCCCTTACCCTGAACCGTGTGACTCTGCAAGCAGACACCTCGAGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CAA 90 bp AGGGAGTTTGTGTCCTGCCCGCCAGAGCACACAGCCTGGTGTGACGGGTCAGACGACGGCGGCTTGTGCTaGAGGCTGTTCCAGCTGGAG +
Preference number: 5 (lower is better)
Translates to: REFVSCPPEHTAWCDGSDDGGLC*RLFQLE
Trigger: CTCCAGCTGGAACAGCCTCAAGCACAAGCCGCCGTC...GTCTGACCCGTCACACCAGGCTGTGTGCTCTGGCGGGCAGGACACAAACTCCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR CAA 90 bp GAGTTTGTGTCCTGCCCGCCAGAGCACACAGCCTGGTGTGACGGGTCAGACAGTTCCGCCGACGGCGGCTaGTGCTTGAGGCTGTTCCAG +
Preference number: 5 (lower is better)
Translates to: EFVSCPPEHTAWCDGSDSSADGG*CLRLFQ
Trigger: CTGGAACAGCCTCAAGCACAAGCCGCCGTCGGCGGA...ACTGTCTGACCCGTCACACCAGGCTGTGTGCTCTGGCGGGCAGGACACAAACTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR CAA 90 bp GGGGACAGCACAGTGTCCAGGAACAGCCACAGCTCAGCGCCCATATGGGGGATACTGGGCATCCTGCCATaGCAGTCCTCATGCCCGGGG +
Preference number: 5 (lower is better)
Translates to: GDSTVSRNSHSSAPIWGILGILP*QSSCPG
Trigger: CCCCGGGCATGAGGACTGCAATGGCAGGATGCCCAG...TATCCCCCATATGGGCGCTGAGCTGTGGCTGTTCCTGGACACTGTGCTGTCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CAA 90 bp CTCAGCGTCACCCCAGCGTTCCCAAACCCCCTTGCACGGTGGTGCCCTCGGCCTATGTTGCCGATGGGCTaGAGGGAGGAGATGAGTGTC +
Preference number: 5 (lower is better)
Translates to: LSVTPAFPNPLARWCPRPMLPMG*REEMSV
Trigger: GACACTCATCTCCTCCCTCAAGCCCATCGGCAACAT...AGGCCGAGGGCACCACCGTGCAAGGGGGTTTGGGAACGCTGGGGTGACGCTGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR CAA 90 bp GCCCCTCCAAGCAAGCCACTGCCGGCTCAGTCTCCCGCACCCTTCCTCTGCAGGATGTTGCCGATGGGCTaGAGGGAGGAGATGAGTGTC +
Preference number: 5 (lower is better)
Translates to: APPSKPLPAQSPAPFLCRMLPMG*REEMSV
Trigger: GACACTCATCTCCTCCCTCAAGCCCATCGGCAACAT...CCTGCAGAGGAAGGGTGCGGGAGACTGAGCCGGCAGTGGCTTGCTTGGAGGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CAA 90 bp GGCCAGAATCCCAGAGCATCAGACAAAAGCCCCGTCCAGGCCCTGGCCCACCTCATGCAGTCCGAGCGGTaGGTGATGTTGCGGGTGTCC +
Preference number: 5 (lower is better)
Translates to: GQNPRASDKSPVQALAHLMQSER*VMLRVS
Trigger: GGACACCCGCAACATCACCAACCGCTCGGACTGCAT...GAGGTGGGCCAGGGCCTGGACGGGGCTTTTGTCTGATGCTCTGGGATTCTGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CAA 90 bp GCCCCTCCAAGCAAGCCACTGCCGGCTCAGTCTCCCGCACCCTTCCTCTGCAGGTGGTTCCATCGGTCCTaGAAGAAGCGCCTCAGACCA +
Preference number: 5 (lower is better)
Translates to: APPSKPLPAQSPAPFLCRWFHRS*KKRLRP
Trigger: TGGTCTGAGGCGCTTCTTCAAGGACCGATGGAACCA...CCTGCAGAGGAAGGGTGCGGGAGACTGAGCCGGCAGTGGCTTGCTTGGAGGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CAA 90 bp CTGAATTGCACCTCTTCTCCAGGGCCTGGTGCCCTCAGAGGCCTGAGGGTCCTCTCCTCCTGCGCCTCCTaGTTGCTGTCGTCCAGGTGC +
Preference number: 5 (lower is better)
Translates to: LNCTSSPGPGALRGLRVLSSCAS*LLSSRC
Trigger: GCACCTGGACGACAGCAACAAGGAGGCGCAGGAGGA...GAGGACCCTCAGGCCTCTGAGGGCACCAGGCCCTGGAGAAGAGGTGCAATTCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CAA 90 bp GCACAGATGCCAAGGTGCCTGCCCACCACCGCTCTACGGAGCCCAGCAGACAGCCAGGACCGGACAGGGTaGAATGGGATCTCCTCCATC +
Preference number: 5 (lower is better)
Translates to: AQMPRCLPTTALRSPADSQDRTG*NGISSI
Trigger: GATGGAGGAGATCCCATTCAACCCTGTCCGGTCCTG...GCTGTCTGCTGGGCTCCGTAGAGCGGTGGTGGGCAGGCACCTTGGCATCTGTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CAA 90 bp TGGACCCTGGAGCCTTCGCTCATGCCCATCCCTTTGCCTAGAACACCTGCCTCGCCTCATCTCTTCCTCTaGCTGGCGGCGTCTCCCGGC +
Preference number: 5 (lower is better)
Translates to: WTLEPSLMPIPLPRTPASPHLFL*LAASPG
Trigger: GCCGGGAGACGCCGCCAGCAAGAGGAAGAGATGAGG...CGAGGCAGGTGTTCTAGGCAAAGGGATGGGCATGAGCGAAGGCTCCAGGGTCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CAA 90 bp GAGGCTCTCTGGAGCGGGCAGTGTTGGGCTTGGACCGAGCCATCCCCACAGGTCTCCGCCACAGGCACCTaGCTCAGCATCACAGCTCTA +
Preference number: 5 (lower is better)
Translates to: EALWSGQCWAWTEPSPQVSATGT*LSITAL
Trigger: TAGAGCTGTGATGCTGAGCAAGGTGCCTGTGGCGGA...GACCTGTGGGGATGGCTCGGTCCAAGCCCAACACTGCCCGCTCCAGAGAGCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CAA 90 bp ATCACAGGCCTCTTCCAGACCCGCCTTGGGGTCCTCCCCACACTCTGCTGTCCCATCCAGGGGGCTATGTaGCGGGCACAGCTCTCTTCC +
Preference number: 5 (lower is better)
Translates to: ITGLFQTRLGVLPTLCCPIQGAM*RAQLSS
Trigger: GGAAGAGAGCTGTGCCCGCAACATAGCCCCCTGGAT...GGGACAGCAGAGTGTGGGGAGGACCCCAAGGCGGGTCTGGAAGAGGCCTGTGAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR CAA 90 bp AGTCACCCAGTGAATCAACTGCACTCACTGTGGGAGCCGGCCCGGCCCCATTTCTGGTGCCCTCGGCCTTaGGTTGGGTCCTTCCCCTCC +
Preference number: 5 (lower is better)
Translates to: SHPVNQLHSLWEPARPHFWCPRP*VGSFPS
Trigger: GGAGGGGAAGGACCCAACCAAAGGCCGAGGGCACCA...GAAATGGGGCCGGGCCGGCTCCCACAGTGAGTGCAGTTGATTCACTGGGTGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS TCA 90 bp GAGCCGCAAGACTCGGAGGACCCCCAAGATCTTGGCTCCCCCGGCTaGGGCCAGGGACACCACGATGTCGATGATGGACACGAAGACAAG +
Preference number: 5 (lower is better)
Translates to: EPQDSEDPQDLGSPG*GQGHHDVDDGHEDK
Trigger: CTTGTCTTCGTGTCCATCATCGACATCGTGGTGTCCCTGGCCTCAGCCGGGGGAGCCAAGATCTTGGGGGTCCTCCGAGTCTTGCGGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000401624.5
ENST00000402142.4
ENST00000404898.5
ENST00000407673.5
CDS GCA 90 bp GAGATGCCCAGGAGCCCTGCAGCGCAATCTTGGGGAGGGTTCCAGTaGCAGTGCCCTTTTCTGGGCCTTTCTGGCTGGCAGACACTGCAG +
Preference number: 5 (lower is better)
Translates to: EMPRSPAAQSWGGFQ*QCPFLGLSGWQTLQ
Trigger: CTGCAGTGTCTGCCAGCCAGAAAGGCCCAGAAAAGGGCACTGGCACTGGAACCCTCCCCAAGATTGCGCTGCAGGGCTCCTGGGCATCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000401624.5
ENST00000402142.4
ENST00000404898.5
ENST00000407673.5
CDS CCA 90 bp GGTCTGTCGCAGGCAGAAGAAGGCAATAGGCGCCAGGTCTGGGTGTaGGACATGAGGATCAGCTCCATCCAGAGGCTCCTCCAGGCCTGG +
Preference number: 5 (lower is better)
Translates to: GLSQAEEGNRRQVWV*DMRISSIQRLLQAW
Trigger: CCAGGCCTGGAGGAGCCTCTGGATGGAGCTGATCCTCATGTCCCACACCCAGACCTGGCGCCTATTGCCTTCTTCTGCCTGCGACAGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401624.5
ENST00000402142.4
ENST00000404898.5
ENST00000407673.5
CDS CCA 90 bp CTTTGGTTGGGTCCTTCCCCTCCCAGTCCCTTGGACTTCCAGGCCTaGCTTAGATCCTGCCCCTTGCCCACAGACCAGTGCTCTAGGGCC +
Preference number: 5 (lower is better)
Translates to: LWLGPSPPSPLDFQA*LRSCPLPTDQCSRA
Trigger: GGCCCTAGAGCACTGGTCTGTGGGCAAGGGGCAGGATCTAAGCCAGGCCTGGAAGTCCAAGGGACTGGGAGGGGAAGGACCCAACCAAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR CAA 90 bp CTGAATTGCACCTCTTCTCCAGGGCCTGGTGCCCTCAGAGGCCTGAGGGTCCTCGGGTTGCACACCATCTaGATGCACCAGTTCCGGGGG +
Preference number: 5 (lower is better)
Translates to: LNCTSSPGPGALRGLRVLGLHTI*MHQFRG
Trigger: CCCCCGGAACTGGTGCATCAAGATGGTGTGCAACCC...GAGGACCCTCAGGCCTCTGAGGGCACCAGGCCCTGGAGAAGAGGTGCAATTCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CAA 90 bp AGGGAGTTTGTGTCCTGCCCGCCAGAGCACACAGCCTGGTGTGACGGGTCAGACAAGACCTGCAGGATCTaGCAGCGGTCGGACAGGCAG +
Preference number: 5 (lower is better)
Translates to: REFVSCPPEHTAWCDGSDKTCRI*QRSDRQ
Trigger: CTGCCTGTCCGACCGCTGCAAGATCCTGCAGGTCTT...GTCTGACCCGTCACACCAGGCTGTGTGCTCTGGCGGGCAGGACACAAACTCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR CAA 90 bp AGTACAGCATCTGCAAACTCGTGGCCCCTGCAGCCTCTCCAGATCACTGCCACCTCCGCCGACGGCGGCTaGTGCTTGAGGCTGTTCCAG +
Preference number: 5 (lower is better)
Translates to: STASANSWPLQPLQITATSADGG*CLRLFQ
Trigger: CTGGAACAGCCTCAAGCACAAGCCGCCGTCGGCGGA...GGTGGCAGTGATCTGGAGAGGCTGCAGGGGCCACGAGTTTGCAGATGCTGTACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CAA 90 bp CACCCCCACAGCGGAGCCCTCAGTGCTTCAGACCTCTGTGTGCCCGTGGGTAGGTTGGTGAAGACGTCTTaGGCGATGCTGGGCATCCTG +
Preference number: 5 (lower is better)
Translates to: HPHSGALSASDLCVPVGRLVKTS*AMLGIL
Trigger: CAGGATGCCCAGCATCGCCAAAGACGTCTTCACCAA...CCTACCCACGGGCACACAGAGGTCTGAAGCACTGAGGGCTCCGCTGTGGGGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR CAA 90 bp TTCCCAAACCCCCTTGCACGGTGGTGCCCTCGGCCTTTGGTTGGGTCCTTCCCCCAGATGAGCACGATGTaGCCGATGGGCTTGAGGGAG +
Preference number: 5 (lower is better)
Translates to: FPNPLARWCPRPLVGSFPQMSTM*PMGLRE
Trigger: CTCCCTCAAGCCCATCGGCAACATCGTGCTCATCTG...GGGGAAGGACCCAACCAAAGGCCGAGGGCACCACCGTGCAAGGGGGTTTGGGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR CAA 90 bp CGGGTCAGACAGTCACCCAGTGAATCAACTGCACTCACTGTGGGAGCCGGCCCGATGCAGTCCGAGCGGTaGGTGATGTTGCGGGTGTCC +
Preference number: 5 (lower is better)
Translates to: RVRQSPSESTALTVGAGPMQSER*VMLRVS
Trigger: GGACACCCGCAACATCACCAACCGCTCGGACTGCAT...CGGGCCGGCTCCCACAGTGAGTGCAGTTGATTCACTGGGTGACTGTCTGACCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR CAA 90 bp CTGAATTGCACCTCTTCTCCAGGGCCTGGTGCCCTCAGAGGCCTGAGGGTCCTCATGGGCAGGGCCGCATaGATCTCGATCTCCTCCAGG +
Preference number: 5 (lower is better)
Translates to: LNCTSSPGPGALRGLRVLMGRAA*ISISSR
Trigger: CCTGGAGGAGATCGAGATCAATGCGGCCCTGCCCAT...GAGGACCCTCAGGCCTCTGAGGGCACCAGGCCCTGGAGAAGAGGTGCAATTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CAA 90 bp GCAGGGAGTTTGTGTCCTGCCCGCCAGAGCACACAGCCTGGTGTGACGGGTCAGCACGGGTTCTCGTCGTaGCAGACCAGCTTCCCAAAG +
Preference number: 5 (lower is better)
Translates to: AGSLCPARQSTQPGVTGQHGFSS*QTSFPK
Trigger: CTTTGGGAAGCTGGTCTGCAACGACGAGAACCCGTG...CTGACCCGTCACACCAGGCTGTGTGCTCTGGCGGGCAGGACACAAACTCCCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR CAA 90 bp CGTTCCCAAACCCCCTTGCACGGTGGTGCCCTCGGCCTTTGGTTGGGTCCTTCCATGGAGCCCGACAGGTaGTCGATGATGGTCAGCTCC +
Preference number: 5 (lower is better)
Translates to: RSQTPLHGGALGLWLGPSMEPDR*SMMVSS
Trigger: GGAGCTGACCATCATCGACAACCTGTCGGGCTCCAT...GGAAGGACCCAACCAAAGGCCGAGGGCACCACCGTGCAAGGGGGTTTGGGAACG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR CAA 90 bp ATCAAGCCCCCACTCACACCCACCCAGAGCACCCAGGGTGTCCTCCCCACTGCCAGCCAGCTGCACCTCTaGCTTGTCGTGGTGACACTT +
Preference number: 5 (lower is better)
Translates to: IKPPLTPTQSTQGVLPTASQLHL*LVVVTL
Trigger: AAGTGTCACCACGACAAGCAAGAGGTGCAGCTGGCT...GGCAGTGGGGAGGACACCCTGGGTGCTCTGGGTGGGTGTGAGTGGGGGCTTGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR CAA 90 bp ATCAAGCCCCCACTCACACCCACCCAGAGCACCCAGGGTGTCCTCCCCACTGCCGGGACTTGGGGGTGCTaGACTGCTGTCATGTTTCAG +
Preference number: 5 (lower is better)
Translates to: IKPPLTPTQSTQGVLPTAGTWGC*TAVMFQ
Trigger: CTGAAACATGACAGCAGTCAAGCACCCCCAAGTCCC...GGCAGTGGGGAGGACACCCTGGGTGCTCTGGGTGGGTGTGAGTGGGGGCTTGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR CAA 90 bp AGTCACCCAGTGAATCAACTGCACTCACTGTGGGAGCCGGCCCGGCCCCATTTCCCCTGCAGCGCAATCTaGGGGAGGGTTCCAGTGCCA +
Preference number: 5 (lower is better)
Translates to: SHPVNQLHSLWEPARPHFPCSAI*GRVPVP
Trigger: TGGCACTGGAACCCTCCCCAAGATTGCGCTGCAGGG...GAAATGGGGCCGGGCCGGCTCCCACAGTGAGTGCAGTTGATTCACTGGGTGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000401624.5
CDS-3UTR CAA 90 bp GGGGACAGCACAGTGTCCAGGAACAGCCACAGCTCAGCGCCCATATGGGGGATACAGAGCTGCTTTGCCTaGAACCTACTGGGGCGGGGG +
Preference number: 5 (lower is better)
Translates to: GDSTVSRNSHSSAPIWGIQSCFA*NLLGRG
Trigger: CCCCCGCCCCAGTAGGTTCAAGGCAAAGCAGCTCTG...TATCCCCCATATGGGCGCTGAGCTGTGGCTGTTCCTGGACACTGTGCTGTCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CAA 90 bp CTTGTCCTGGCCAGTGGATCACAGCTTCCCTGGTTCTCATCTCTGTCACCCACAGTTTCCCGGGTGGGCTaGACAACCCCTCCCGGCCCC +
Preference number: 5 (lower is better)
Translates to: LVLASGSQLPWFSSLSPTVSRVG*TTPPGP
Trigger: GGGGCCGGGAGGGGTTGTCAAGCCCACCCGGGAAAC...TGTGGGTGACAGAGATGAGAACCAGGGAAGCTGTGATCCACTGGCCAGGACAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CAA 90 bp GGTCAGAGCTGCTTTGCCTTGAACCTACTGGGGCGGGGGCATAGTTGCTCAGGACTGGAGCGGGCAGTGTaGGGCTTGGACCGAGCCATC +
Preference number: 5 (lower is better)
Translates to: GQSCFALNLLGRGHSCSGLERAV*GLDRAI
Trigger: GATGGCTCGGTCCAAGCCCAACACTGCCCGCTCCAG...TCCTGAGCAACTATGCCCCCGCCCCAGTAGGTTCAAGGCAAAGCAGCTCTGACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402142.4
ENST00000404898.5
CDS-3UTR CAA 90 bp GGCCAGAATCCCAGAGCATCAGACAAAAGCCCCGTCCAGGCCCTGGCCCACCTCCCTCGAGGTGTCTGCTaGCAGAGTCACACGGTTCAG +
Preference number: 5 (lower is better)
Translates to: GQNPRASDKSPVQALAHLPRGVC*QSHTVQ
Trigger: