Pregenerated sensors for CACNA1F (Homo sapiens)
Ensembl gene IDs: ENSG00000102001Ensembl transcript IDs: ENST00000323022.10, ENST00000376251.5, ENST00000376265.2, ENST00000480889.1, ENST00000481035.1, ENST00000486943.1
Found 99 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AATATTTGCGATAGGGTCTTGTCCTGTCACCAGGCGGGAGTGCAGTaGCATGATCACAGCTCACTGTGGCCTCATCCTCCCAGGTTCAAG | + |
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Preference number: 1 (lower is better) Translates to: NICDRVLSCHQAGVQ*HDHSSLWPHPPRFK Trigger: CTTGAACCTGGGAGGATGAGGCCACAGTGAGCTGTGATCATGCCACTGCACTCCCGCCTGGTGACAGGACAAGACCCTATCGCAAATATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000486943.1 |
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| 3UTR TCA 72 bp | AGAGAGGCGGTTTCACTATTTTGCCAGGACTGGTCTTaGACCCTAGGGTTCAAGCGATCCTTCCACCCTGGA | + |
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Preference number: 3 (lower is better) Translates to: REAVSLFCQDWS*TLGFKRSFHPG Trigger: TCCAGGGTGGAAGGATCGCTTGAACCCTAGGGTTCAAGACCAGTCCTGGCAAAATAGTGAAACCGCCTCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000486943.1 |
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| CDS-3UTR TCA 90 bp | TTGCCAGGACTGGTCTTGAACCCTAGGGTTCAAGCGATCCTTCCACCCTGGACTCCTCTGTGTCACAGGTaGGGGCCTGCCGCATCTCAG | + |
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Preference number: 4 (lower is better) Translates to: LPGLVLNPRVQAILPPWTPLCHR*GPAASQ Trigger: CTGAGATGCGGCAGGCCCTCACCTGTGACACAGAGG...AGTCCAGGGTGGAAGGATCGCTTGAACCCTAGGGTTCAAGACCAGTCCTGGCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000486943.1 |
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| CDS-3UTR TCA 90 bp | TTGCCAGGACTGGTCTTGAACCCTAGGGTTCAAGCGATCCTTCCACCCTGGACTGGGAGTGCAGTGGCATaGTCACAGCTCACTGTGGCC | + |
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Preference number: 4 (lower is better) Translates to: LPGLVLNPRVQAILPPWTGSAVA*SQLTVA Trigger: GGCCACAGTGAGCTGTGATCATGCCACTGCACTCCC...AGTCCAGGGTGGAAGGATCGCTTGAACCCTAGGGTTCAAGACCAGTCCTGGCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000486943.1 |
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| CDS-3UTR GCA 90 bp | AGAGGCGGTTTCACTATTTTGCCAGGACTGGTCTTGAACCCTAGGGTTCAAGCGTCAGGACCCAAGTCCTaGAGGCTCCGCAGACCAGCC | + |
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Preference number: 4 (lower is better) Translates to: RGGFTILPGLVLNPRVQASGPKS*RLRRPA Trigger: GGCTGGTCTGCGGAGCCTGCAGGACTTGGGTCCTGA...CGCTTGAACCCTAGGGTTCAAGACCAGTCCTGGCAAAATAGTGAAACCGCCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000486943.1 |
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| CDS-3UTR CCA 90 bp | CTGGTCTTGAACCCTAGGGTTCAAGCGATCCTTCCACCCTGGACTCCCAAAGTGCAGGCGGGAGTGCAGTaGCATGATCACAGCTCACTG | + |
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Preference number: 4 (lower is better) Translates to: LVLNPRVQAILPPWTPKVQAGVQ*HDHSSL Trigger: CAGTGAGCTGTGATCATGCCACTGCACTCCCGCCTG...CACTTTGGGAGTCCAGGGTGGAAGGATCGCTTGAACCCTAGGGTTCAAGACCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000486943.1 |
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| CDS-3UTR GCA 90 bp | ACTATTTTGCCAGGACTGGTCTTGAACCCTAGGGTTCAAGCGATCCTTCCACCCTCACAGGTGAGGGCCTaGCGCATCTCAGGACCCAAG | + |
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Preference number: 4 (lower is better) Translates to: TILPGLVLNPRVQAILPPSQVRA*RISGPK Trigger: CTTGGGTCCTGAGATGCGGCAGGCCCTCACCTGTGA...GGGTGGAAGGATCGCTTGAACCCTAGGGTTCAAGACCAGTCCTGGCAAAATAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000486943.1 |
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| CDS-3UTR TCA 90 bp | CCAGGACTGGTCTTGAACCCTAGGGTTCAAGCGATCCTTCCACCCTGGACTCCCAAGTTCCTGGGAGAGTaGAAACTTGTCCCCACTTTG | + |
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Preference number: 4 (lower is better) Translates to: PGLVLNPRVQAILPPWTPKFLGE*KLVPTL Trigger: CAAAGTGGGGACAAGTTTTCACTCTCCCAGGAACTT...GGGAGTCCAGGGTGGAAGGATCGCTTGAACCCTAGGGTTCAAGACCAGTCCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000486943.1 |
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| CDS-3UTR GCA 90 bp | AGAGGCGGTTTCACTATTTTGCCAGGACTGGTCTTGAACCCTAGGGTTCAAGCGGTCACCAGGCGGGAGTaGAGTGGCATGATCACAGCT | + |
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Preference number: 4 (lower is better) Translates to: RGGFTILPGLVLNPRVQAVTRRE*SGMITA Trigger: AGCTGTGATCATGCCACTGCACTCCCGCCTGGTGAC...CGCTTGAACCCTAGGGTTCAAGACCAGTCCTGGCAAAATAGTGAAACCGCCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000486943.1 |
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| CDS-3UTR CCA 90 bp | TTCACTATTTTGCCAGGACTGGTCTTGAACCCTAGGGTTCAAGCGATCCTTCCACAGAGGGGGCTTCTCTaGGGGAGCTTCTTCCCAGAA | + |
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Preference number: 4 (lower is better) Translates to: FTILPGLVLNPRVQAILPQRGLL*GSFFPE Trigger: TTCTGGGAAGAAGCTCCCCCAGAGAAGCCCCCTCTG...TGGAAGGATCGCTTGAACCCTAGGGTTCAAGACCAGTCCTGGCAAAATAGTGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000486943.1 |
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| CDS-3UTR TCA 90 bp | CCAGGACTGGTCTTGAACCCTAGGGTTCAAGCGATCCTTCCACCCTGGACTCCCAATCACTCAGGGGATTaGCGAAGTATTTTACAATCA | + |
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Preference number: 4 (lower is better) Translates to: PGLVLNPRVQAILPPWTPNHSGD*RSILQS Trigger: TGATTGTAAAATACTTCGTCAATCCCCTGAGTGATT...GGGAGTCCAGGGTGGAAGGATCGCTTGAACCCTAGGGTTCAAGACCAGTCCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000486943.1 |
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| CDS-3UTR CCA 90 bp | TTCACTATTTTGCCAGGACTGGTCTTGAACCCTAGGGTTCAAGCGATCCTTCCATTACAATCAAGTTCCTaGGAGAGTGAAAACTTGTCC | + |
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Preference number: 4 (lower is better) Translates to: FTILPGLVLNPRVQAILPLQSSS*ESENLS Trigger: GGACAAGTTTTCACTCTCCCAGGAACTTGATTGTAA...TGGAAGGATCGCTTGAACCCTAGGGTTCAAGACCAGTCCTGGCAAAATAGTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000486943.1 |
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| CDS GCA 90 bp | CACAGCCCAGTAGCAGGCATTGGACTTCACTGCCCGACGGCAGCGTaGCCGAAGGACCCGGTTGGCTCGGCGGAGGCGGCGGCAGACTCT | + |
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Preference number: 5 (lower is better) Translates to: HSPVAGIGLHCPTAA*PKDPVGSAEAAADS Trigger: AGAGTCTGCCGCCGCCTCCGCCGAGCCAACCGGGTCCTTCGGGCACGCTGCCGTCGGGCAGTGAAGTCCAATGCCTGCTACTGGGCTGTG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000323022.10 ENST00000376251.5 ENST00000376265.2 |
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| CDS TCA 90 bp | CCAGCGCCCGCGGCACTCAGTCTGGTTCAGCGTGCACGCACGCCCTaGTCCCGAAGACGCACAGGGCGATGGGTCCTCCTCCGCTTCCAT | + |
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Preference number: 5 (lower is better) Translates to: PAPAALSLVQRARTP*SRRRTGRWVLLRFH Trigger: ATGGAAGCGGAGGAGGACCCATCGCCCTGTGCGTCTTCGGGATCAGGGCGTGCGTGCACGCTGAACCAGACTGAGTGCCGCGGGCGCTGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000323022.10 ENST00000376251.5 ENST00000376265.2 |
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| CDS TCA 90 bp | TCCCATGGCTGGGGTCCGAGTGGGTTCCAGGCACGTGCAGACAGGTaGAGGTGCGCAGTGGGCCACTGGATCTGCCGAGGTACCCCTCCC | + |
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Preference number: 5 (lower is better) Translates to: SHGWGPSGFQARADR*RCAVGHWICRGTPP Trigger: GGGAGGGGTACCTCGGCAGATCCAGTGGCCCACTGCGCACCTTCACCTGTCTGCACGTGCCTGGAACCCACTCGGACCCCAGCCATGGGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000323022.10 ENST00000376251.5 ENST00000376265.2 |
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| CDS GCA 90 bp | GAAGACGAGCAACAGCACAGCCCAGTAGCAGGCATTGGACTTCACTaGCCGACGGCAGCGTGCCCGAAGGACCCGGTTGGCTCGGCGGAG | + |
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Preference number: 5 (lower is better) Translates to: EDEQQHSPVAGIGLH*PTAACPKDPVGSAE Trigger: CTCCGCCGAGCCAACCGGGTCCTTCGGGCACGCTGCCGTCGGGCAGTGAAGTCCAATGCCTGCTACTGGGCTGTGCTGTTGCTCGTCTTC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000323022.10 ENST00000376251.5 ENST00000376265.2 |
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| CDS CCA 90 bp | CCAGAGCCCCCTCCTCCTCATCCTCATCGCCTTGGGTCTCTGTCATaGAACCGGTGTCACTGGCTGGGAGGCTGGCATGGCTGCTGGTGG | + |
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Preference number: 5 (lower is better) Translates to: PEPPPPHPHRLGSLS*NRCHWLGGWHGCWW Trigger: CCACCAGCAGCCATGCCAGCCTCCCAGCCAGTGACACCGGTTCCATGACAGAGACCCAAGGCGATGAGGATGAGGAGGAGGGGGCTCTGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000323022.10 ENST00000376251.5 ENST00000376265.2 |
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| CDS CCA 90 bp | CGTGTACAGCTGGCCAGAGCCCCCTCCTCCTCATCCTCATCGCCTTaGGTCTCTGTCATGGAACCGGTGTCACTGGCTGGGAGGCTGGCA | + |
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Preference number: 5 (lower is better) Translates to: RVQLARAPSSSSSSP*VSVMEPVSLAGRLA Trigger: TGCCAGCCTCCCAGCCAGTGACACCGGTTCCATGACAGAGACCCAAGGCGATGAGGATGAGGAGGAGGGGGCTCTGGCCAGCTGTACACG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000323022.10 ENST00000376251.5 ENST00000376265.2 |
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| CDS CCA 90 bp | CTCTCCTGTGGGTGTTGGATCCAGCCTGGGGCACACTGGGCTGACTaGAGGTGGGAGTCCCCCTGTCATCATCACTGGGCCCAAAGGAGA | + |
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Preference number: 5 (lower is better) Translates to: LSCGCWIQPGAHWAD*RWESPCHHHWAQRR Trigger: TCTCCTTTGGGCCCAGTGATGATGACAGGGGGACTCCCACCTCCAGTCAGCCCAGTGTGCCCCAGGCTGGATCCAACACCCACAGGAGAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000323022.10 ENST00000376251.5 ENST00000376265.2 |
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| CDS TCA 90 bp | GGGAGGCTGGCATGGCTGCTGGTGGAGTGTGTGGAGCGAGTAGAATaGCTGAACCAGCGCAGACGTCCACGCCTCCTATTGGTCAGCTCG | + |
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Preference number: 5 (lower is better) Translates to: GRLAWLLVECVERVE*LNQRRRPRLLLVSS Trigger: CGAGCTGACCAATAGGAGGCGTGGACGTCTGCGCTGGTTCAGTCATTCTACTCGCTCCACACACTCCACCAGCAGCCATGCCAGCCTCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000323022.10 ENST00000376251.5 ENST00000376265.2 |
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| CDS GCA 90 bp | AGTGCCCGAGGTGACCGCTGGGCACTGGCCACTGCCACTGTCTTGTaGTTGCTGTGCTGGTTTCTTCGCTTAGGGGTCCCTAGGCCTGAT | + |
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Preference number: 5 (lower is better) Translates to: SARGDRWALATATVL*LLCWFLRLGVPRPD Trigger: ATCAGGCCTAGGGACCCCTAAGCGAAGAAACCAGCACAGCAAGCACAAGACAGTGGCAGTGGCCAGTGCCCAGCGGTCACCTCGGGCACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000323022.10 ENST00000376265.2 |
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| CDS CCA 90 bp | AGAGGATTGGCCAGGGTGAGGCAGAAGAGTGCCCGAGGTGACCGCTaGGCACTGGCCACTGCCACTGTCTTGTGCTTGCTGTGCTGGTTT | + |
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Preference number: 5 (lower is better) Translates to: RGLARVRQKSARGDR*ALATATVLCLLCWF Trigger: AAACCAGCACAGCAAGCACAAGACAGTGGCAGTGGCCAGTGCCCAGCGGTCACCTCGGGCACTCTTCTGCCTCACCCTGGCCAATCCTCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000323022.10 ENST00000376265.2 |
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| CDS CCA 90 bp | CCATCTCATCCAGCGTCAGGCGACACGCATCTGCAATCTCCTGCTTaGCCAGGGCCACGAAACGTGGGTCTCGAGCAAAGAGGCCCAGAC | + |
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Preference number: 5 (lower is better) Translates to: PSHPASGDTHLQSPA*PGPRNVGLEQRGPD Trigger: GTCTGGGCCTCTTTGCTCGAGACCCACGTTTCGTGGCCCTGGCCAAGCAGGAGATTGCAGATGCGTGTCGCCTGACGCTGGATGAGATGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000323022.10 ENST00000376251.5 ENST00000376265.2 |
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| CDS GCA 90 bp | TTGTCCATCTCATCCAGCGTCAGGCGACACGCATCTGCAATCTCCTaGTTGGCCAGGGCCACGAAACGTGGGTCTCGAGCAAAGAGGCCC | + |
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Preference number: 5 (lower is better) Translates to: LSISSSVRRHASAIS*LARATKRGSRAKRP Trigger: GGGCCTCTTTGCTCGAGACCCACGTTTCGTGGCCCTGGCCAAGCAGGAGATTGCAGATGCGTGTCGCCTGACGCTGGATGAGATGGACAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000323022.10 ENST00000376251.5 ENST00000376265.2 |
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| CDS GCA 90 bp | ACTGGCAGCATTGTCCATCTCATCCAGCGTCAGGCGACACGCATCTaGAATCTCCTGCTTGGCCAGGGCCACGAAACGTGGGTCTCGAGC | + |
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Preference number: 5 (lower is better) Translates to: TGSIVHLIQRQATRI*NLLLGQGHETWVSS Trigger: GCTCGAGACCCACGTTTCGTGGCCCTGGCCAAGCAGGAGATTGCAGATGCGTGTCGCCTGACGCTGGATGAGATGGACAATGCTGCCAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000323022.10 ENST00000376251.5 ENST00000376265.2 |
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| CDS GCA 90 bp | CCCCACCAGCTCATCACTACCTCCTCCTACCAATACCCCAGAGCTTaGCAGGGAAGAACTGGAGGGCAGTCAGAGAGGGCAGAGGATGGG | + |
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Preference number: 5 (lower is better) Translates to: PHQLITTSSYQYPRA*QGRTGGQSERAEDG Trigger: CCCATCCTCTGCCCTCTCTGACTGCCCTCCAGTTCTTCCCTGGCAAGCTCTGGGGTATTGGTAGGAGGAGGTAGTGATGAGCTGGTGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000481035.1 |
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| CDS CCA 90 bp | TGTGGGTGTTGGATCCAGCCTGGGGCACACTGGGCTGACTGGAGGTaGGAGTCCCCCTGTCATCATCACTGGGCCCAAAGGAGAGTGAAT | + |
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Preference number: 5 (lower is better) Translates to: CGCWIQPGAHWADWR*ESPCHHHWAQRRVN Trigger: ATTCACTCTCCTTTGGGCCCAGTGATGATGACAGGGGGACTCCCACCTCCAGTCAGCCCAGTGTGCCCCAGGCTGGATCCAACACCCACA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000323022.10 ENST00000376251.5 ENST00000376265.2 |
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| CDS GCA 90 bp | TTCTTCCTCCTCCTCCTCCTCCTCCATGTCTGCTCCTTCCCTCCTTaGACCCTCCTCTTCCTCTTTCTCCACACCAGGCACCAGGCCTTC | + |
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Preference number: 5 (lower is better) Translates to: FFLLLLLLHVCSFPP*TLLFLFLHTRHQAF Trigger: GAAGGCCTGGTGCCTGGTGTGGAGAAAGAGGAAGAGGAGGGTGCAAGGAGGGAAGGAGCAGACATGGAGGAGGAGGAGGAGGAGGAAGAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000323022.10 ENST00000376251.5 ENST00000376265.2 |
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| CDS CCA 90 bp | CCTCGTCGCTATAGAGAGAGCTGGTTCCCTGTGCCAGCAGGTCACTaGCAGCATTGTCCATCTCATCCAGCGTCAGGCGACACGCATCTG | + |
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Preference number: 5 (lower is better) Translates to: PRRYRESWFPVPAGH*QHCPSHPASGDTHL Trigger: CAGATGCGTGTCGCCTGACGCTGGATGAGATGGACAATGCTGCCAGTGACCTGCTGGCACAGGGAACCAGCTCTCTCTATAGCGACGAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000323022.10 ENST00000376251.5 ENST00000376265.2 |
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| CDS CCA 90 bp | AGGCCATCTCGTCTCCCAAGTCCTCCTCATCGAAGCGGGAGAGGATaGACTCCTCGTCGCTATAGAGAGAGCTGGTTCCCTGTGCCAGCA | + |
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Preference number: 5 (lower is better) Translates to: RPSRLPSPPHRSGRG*TPRRYRESWFPVPA Trigger: TGCTGGCACAGGGAACCAGCTCTCTCTATAGCGACGAGGAGTCCATCCTCTCCCGCTTCGATGAGGAGGACTTGGGAGACGAGATGGCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000323022.10 ENST00000376251.5 ENST00000376265.2 |
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| CDS-3UTR CAA 90 bp | CCAGGACTGGTCTTGAACCCTAGGGTTCAAGCGATCCTTCCACCCTGGACTCCCCTAGGGGCGGCGTCGTaGCCTAGTAGCCCTTTTTCT | + |
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Preference number: 5 (lower is better) Translates to: PGLVLNPRVQAILPPWTPLGAAS*PSSPFS Trigger: AGAAAAAGGGCTACTAGGCAACGACGCCGCCCCTAG...GGGAGTCCAGGGTGGAAGGATCGCTTGAACCCTAGGGTTCAAGACCAGTCCTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000486943.1 |
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| CDS TCA 90 bp | GGAGGTGGGAGTCCCCCTGTCATCATCACTGGGCCCAAAGGAGAGTaGATCTGGAAGTCTGTCCCCGACAGGCAGAGACACAGAAATCCC | + |
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Preference number: 5 (lower is better) Translates to: GGGSPPVIITGPKGE*IWKSVPDRQRHRNP Trigger: GGGATTTCTGTGTCTCTGCCTGTCGGGGACAGACTTCCAGATTCACTCTCCTTTGGGCCCAGTGATGATGACAGGGGGACTCCCACCTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000323022.10 ENST00000376251.5 ENST00000376265.2 |
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| CDS GCA 90 bp | AACCCTGAGCCCTATTGGGCCCTGAATTTCGCCCACGATGATAGGTaGCTGGGATGGGTAAATCCTCACAACTGCCCTGGCGCTGCAGAC | + |
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Preference number: 5 (lower is better) Translates to: NPEPYWALNFAHDDR*LGWVNPHNCPGAAD Trigger: GTCTGCAGCGCCAGGGCAGTTGTGAGGATTTACCCATCCCAGGCACCTATCATCGTGGGCGAAATTCAGGGCCCAATAGGGCTCAGGGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000323022.10 ENST00000376251.5 ENST00000376265.2 |
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| CDS CCA 90 bp | CCCTATTGGGCCCTGAATTTCGCCCACGATGATAGGTGCCTGGGATaGGTAAATCCTCACAACTGCCCTGGCGCTGCAGACACTGGATGG | + |
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Preference number: 5 (lower is better) Translates to: PYWALNFAHDDRCLG*VNPHNCPGAADTGW Trigger: CCATCCAGTGTCTGCAGCGCCAGGGCAGTTGTGAGGATTTACCCATCCCAGGCACCTATCATCGTGGGCGAAATTCAGGGCCCAATAGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000323022.10 ENST00000376251.5 ENST00000376265.2 |
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| CDS CCA 90 bp | CATCGAAGCGGGAGAGGATGGACTCCTCGTCGCTATAGAGAGAGCTaGTTCCCTGTGCCAGCAGGTCACTGGCAGCATTGTCCATCTCAT | + |
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Preference number: 5 (lower is better) Translates to: HRSGRGWTPRRYRES*FPVPAGHWQHCPSH Trigger: ATGAGATGGACAATGCTGCCAGTGACCTGCTGGCACAGGGAACCAGCTCTCTCTATAGCGACGAGGAGTCCATCCTCTCCCGCTTCGATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000323022.10 ENST00000376251.5 ENST00000376265.2 |
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| CDS CCA 90 bp | CACTACCTCCTCCTACCAATACCCCAGAGCTTGCCAGGGAAGAACTaGAGGGCAGTCAGAGAGGGCAGAGGATGGGGCAGTGGAAACTTT | + |
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Preference number: 5 (lower is better) Translates to: HYLLLPIPQSLPGKN*RAVREGRGWGSGNF Trigger: AAAGTTTCCACTGCCCCATCCTCTGCCCTCTCTGACTGCCCTCCAGTTCTTCCCTGGCAAGCTCTGGGGTATTGGTAGGAGGAGGTAGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000481035.1 |
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| CDS GCA 90 bp | AGGATGTCGAAGGGCTTCCACTCCACGATGCTTGCTCCAAGGGTCTaGAGGGATGGAAGGATTCTCTCACCTTTCCCGCCTTCAGATTCC | + |
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Preference number: 5 (lower is better) Translates to: RMSKGFHSTMLAPRV*RDGRILSPFPPSDS Trigger: GGAATCTGAAGGCGGGAAAGGTGAGAGAATCCTTCCATCCCTGCAGACCCTTGGAGCAAGCATCGTGGAGTGGAAGCCCTTCGACATCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376251.5 |
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| CDS CCA 90 bp | ACAGGCAGAGACACAGAAATCCCGGAGCCCCGGCGAGCTGAGGGCTaGGAGACCATCGTGGCTTTGTTAGTTTCCAAGTCCTTTTCATCT | + |
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Preference number: 5 (lower is better) Translates to: TGRDTEIPEPRRAEG*ETIVALLVSKSFSS Trigger: AGATGAAAAGGACTTGGAAACTAACAAAGCCACGATGGTCTCCCAGCCCTCAGCTCGCCGGGGCTCCGGGATTTCTGTGTCTCTGCCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000323022.10 ENST00000376251.5 ENST00000376265.2 |
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| CDS GCA 90 bp | CACCTTCTCCTTGGGTACAACTTCCTGCAGGAGTTCCACACCCCCTaGACCCTCTTCCTCTTCTTCCTCTTCTTCCTCTTCTTCCTCCTC | + |
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Preference number: 5 (lower is better) Translates to: HLLLGYNFLQEFHTP*TLFLFFLFFLFFLL Trigger: GAGGAGGAAGAAGAGGAAGAAGAGGAAGAAGAGGAAGAGGGTGCAGGGGGTGTGGAACTCCTGCAGGAAGTTGTACCCAAGGAGAAGGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000323022.10 ENST00000376251.5 ENST00000376265.2 |
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| CDS GCA 90 bp | TTGTTAGTTTCCAAGTCCTTTTCATCTTCCTCCTCCACTCCCTCCTaGCCCTCTTCTTCCTCCTCCTCTGTGTCACAGGTGAGGGCCTGC | + |
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Preference number: 5 (lower is better) Translates to: LLVSKSFSSSSSTPS*PSSSSSSVSQVRAC Trigger: GCAGGCCCTCACCTGTGACACAGAGGAGGAGGAAGAAGAGGGGCAGGAGGGAGTGGAGGAGGAAGATGAAAAGGACTTGGAAACTAACAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000323022.10 ENST00000376251.5 ENST00000376265.2 ENST00000486943.1 |
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| CDS TCA 90 bp | ACACTGCTGAGGATGATGAACACCAGGATAAGATTGGTGAAGACATaGTGGTGGATGAGGGTGTGGCAGCCCTTCCTCAGCGGGTTGGTT | + |
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Preference number: 5 (lower is better) Translates to: TLLRMMNTRIRLVKT*WWMRVWQPFLSGLV Trigger: AACCAACCCGCTGAGGAAGGGCTGCCACACCCTCATCCACCATCATGTCTTCACCAATCTTATCCTGGTGTTCATCATCCTCAGCAGTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000323022.10 ENST00000376251.5 ENST00000376265.2 |
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| CDS GCA 90 bp | AGCAGATCCAACATATTAAACCAGCTACGGCAGAAGGAGCCGCGGTaGAGGAAGGCCCCAAACACTGTCATCTTTAGTAGAATCTCCACA | + |
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Preference number: 5 (lower is better) Translates to: SRSNILNQLRQKEPR*RKAPNTVIFSRIST Trigger: TGTGGAGATTCTACTAAAGATGACAGTGTTTGGGGCCTTCCTGCACCGCGGCTCCTTCTGCCGTAGCTGGTTTAATATGTTGGATCTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000323022.10 ENST00000376251.5 ENST00000376265.2 |
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| CDS-3UTR CAA 90 bp | TTGCCAGGACTGGTCTTGAACCCTAGGGTTCAAGCGATCCTTCCACCCTGGACTAAATCACTCAGGGGATaGACGAAGTATTTTACAATC | + |
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Preference number: 5 (lower is better) Translates to: LPGLVLNPRVQAILPPWTKSLRG*TKYFTI Trigger: GATTGTAAAATACTTCGTCAATCCCCTGAGTGATTT...AGTCCAGGGTGGAAGGATCGCTTGAACCCTAGGGTTCAAGACCAGTCCTGGCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000486943.1 |
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| CDS-3UTR CAA 90 bp | AGAGGCGGTTTCACTATTTTGCCAGGACTGGTCTTGAACCCTAGGGTTCAAGCGAAACTTGTCCCCACTTaGTTAGTTTCCAAGTCCTTT | + |
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Preference number: 5 (lower is better) Translates to: RGGFTILPGLVLNPRVQAKLVPT*LVSKSF Trigger: AAAGGACTTGGAAACTAACAAAGTGGGGACAAGTTT...CGCTTGAACCCTAGGGTTCAAGACCAGTCCTGGCAAAATAGTGAAACCGCCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000486943.1 |
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| CDS-3UTR CAA 90 bp | AATATTTGCGATAGGGTCTTGTCCTGTCACCAGGCGGGAGTGCAGTGGCATGATATAAATATTTTTCTATaGCAGAGGGGGCTTCTCTGG | + |
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Preference number: 5 (lower is better) Translates to: NICDRVLSCHQAGVQWHDINIFL*QRGLLW Trigger: CCAGAGAAGCCCCCTCTGCAATAGAAAAATATTTAT...ATCATGCCACTGCACTCCCGCCTGGTGACAGGACAAGACCCTATCGCAAATATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000486943.1 |
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| CDS GCA 72 bp | CCGGTGTGCGGGGCGTCGCCTGGCCGTCCGGGGCCCTaGTCCAGCAGAACGCTGAACAGCCCGACCACGACG | + |
|
Preference number: 6 (lower is better) Translates to: PVCGASPGRPGP*SSRTLNSPTTT Trigger: CGTCGTGGTCGGGCTGTTCAGCGTTCTGCTGGAGCAGGGCCCCGGACGGCCAGGCGACGCCCCGCACACCGG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000323022.10 ENST00000376251.5 ENST00000376265.2 |
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| CDS GCA 72 bp | CTGGCCAGCGCCCGCGGCACTCAGTCTGGTTCAGCGTaGACGCACGCCCTGATCCCGAAGACGCACAGGGCG | + |
|
Preference number: 6 (lower is better) Translates to: LASARGTQSGSA*THALIPKTHRA Trigger: CGCCCTGTGCGTCTTCGGGATCAGGGCGTGCGTGCACGCTGAACCAGACTGAGTGCCGCGGGCGCTGGCCAG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000323022.10 ENST00000376251.5 ENST00000376265.2 |
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| CDS GCA 72 bp | GTAGCAGGCATTGGACTTCACTGCCCGACGGCAGCGTaGCCGAAGGACCCGGTTGGCTCGGCGGAGGCGGCG | + |
|
Preference number: 6 (lower is better) Translates to: VAGIGLHCPTAA*PKDPVGSAEAA Trigger: CGCCGCCTCCGCCGAGCCAACCGGGTCCTTCGGGCACGCTGCCGTCGGGCAGTGAAGTCCAATGCCTGCTAC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000323022.10 ENST00000376251.5 ENST00000376265.2 |
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| CDS TCA 72 bp | GCGGCACTCAGTCTGGTTCAGCGTGCACGCACGCCCTaGTCCCGAAGACGCACAGGGCGATGGGTCCTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: AALSLVQRARTP*SRRRTGRWVLL Trigger: GAGGAGGACCCATCGCCCTGTGCGTCTTCGGGATCAGGGCGTGCGTGCACGCTGAACCAGACTGAGTGCCGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000323022.10 ENST00000376251.5 ENST00000376265.2 |
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| CDS CCA 72 bp | GCCTCCACCAAGCTGTCGGCACTGCCCCTCTTCCCATaGCTGGGGTCCGAGTGGGTTCCAGGCACGTGCAGA | + |
|
Preference number: 6 (lower is better) Translates to: ASTKLSALPLFP*LGSEWVPGTCR Trigger: TCTGCACGTGCCTGGAACCCACTCGGACCCCAGCCATGGGAAGAGGGGCAGTGCCGACAGCTTGGTGGAGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000323022.10 ENST00000376251.5 ENST00000376265.2 |
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| CDS TCA 72 bp | TGGGGTCCGAGTGGGTTCCAGGCACGTGCAGACAGGTaGAGGTGCGCAGTGGGCCACTGGATCTGCCGAGGT | + |
|
Preference number: 6 (lower is better) Translates to: WGPSGFQARADR*RCAVGHWICRG Trigger: ACCTCGGCAGATCCAGTGGCCCACTGCGCACCTTCACCTGTCTGCACGTGCCTGGAACCCACTCGGACCCCA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000323022.10 ENST00000376251.5 ENST00000376265.2 |
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| CDS GCA 72 bp | CAACAGCACAGCCCAGTAGCAGGCATTGGACTTCACTaGCCGACGGCAGCGTGCCCGAAGGACCCGGTTGGC | + |
|
Preference number: 6 (lower is better) Translates to: QQHSPVAGIGLH*PTAACPKDPVG Trigger: GCCAACCGGGTCCTTCGGGCACGCTGCCGTCGGGCAGTGAAGTCCAATGCCTGCTACTGGGCTGTGCTGTTG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000323022.10 ENST00000376251.5 ENST00000376265.2 |
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| CDS CCA 72 bp | GCCAGGGTGAGGCAGAAGAGTGCCCGAGGTGACCGCTaGGCACTGGCCACTGCCACTGTCTTGTGCTTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: ARVRQKSARGDR*ALATATVLCLL Trigger: CAGCAAGCACAAGACAGTGGCAGTGGCCAGTGCCCAGCGGTCACCTCGGGCACTCTTCTGCCTCACCCTGGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000323022.10 ENST00000376265.2 |
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| CDS CAA 72 bp | GCGGGGCATACAGGAGCCGACCCCGCTGAGGTGGTGTaGCCCAGGAACCCTGAGCCCTATTGGGCCCTGAAT | + |
|
Preference number: 6 (lower is better) Translates to: AGHTGADPAEVV*PRNPEPYWALN Trigger: ATTCAGGGCCCAATAGGGCTCAGGGTTCCTGGGCAACACCACCTCAGCGGGGTCGGCTCCTGTATGCCCCGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000323022.10 ENST00000376251.5 ENST00000376265.2 |
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| CDS CAA 90 bp | GCGTGTACAGCTGGCCAGAGCCCCCTCCTCCTCATCCTCATCGCCTaGGGTCTCTGTCATGGAACCGGTGTCACTGGCTGGGAGGCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: ACTAGQSPLLLILIA*GLCHGTGVTGWEAG Trigger: GCCAGCCTCCCAGCCAGTGACACCGGTTCCATGACAGAGACCCAAGGCGATGAGGATGAGGAGGAGGGGGCTCTGGCCAGCTGTACACGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000323022.10 ENST00000376251.5 ENST00000376265.2 |
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| CDS TCA 72 bp | ACTGTTGACCCAGAGCCGCTCCCGGACCAGGGGCCGTaGCACGTCTCCATCTGGGTATACCAGGAAGGAGCC | + |
|
Preference number: 6 (lower is better) Translates to: TVDPEPLPDQGP*HVSIWVYQEGA Trigger: GGCTCCTTCCTGGTATACCCAGATGGAGACGTGTCACGGCCCCTGGTCCGGGAGCGGCTCTGGGTCAACAGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000323022.10 ENST00000376251.5 ENST00000376265.2 |
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| CDS GCA 72 bp | TTCCCATGGCTGGGGTCCGAGTGGGTTCCAGGCACGTaGAGACAGGTGAAGGTGCGCAGTGGGCCACTGGAT | + |
|
Preference number: 6 (lower is better) Translates to: FPWLGSEWVPGT*RQVKVRSGPLD Trigger: ATCCAGTGGCCCACTGCGCACCTTCACCTGTCTGCACGTGCCTGGAACCCACTCGGACCCCAGCCATGGGAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000323022.10 ENST00000376251.5 ENST00000376265.2 |
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| CDS CCA 72 bp | CCCATTCGGGACCAGGGCCTGCCCCATTGGCTGGACTaGGCTCTGGGGTGGTGTCTTTCCCGCCTTCAGATT | + |
|
Preference number: 6 (lower is better) Translates to: PIRDQGLPHWLD*ALGWCLSRLQI Trigger: AATCTGAAGGCGGGAAAGACACCACCCCAGAGCCCAGTCCAGCCAATGGGGCAGGCCCTGGTCCCGAATGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000323022.10 ENST00000376265.2 |
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| CDS CCA 72 bp | TGGATCCAGCCTGGGGCACACTGGGCTGACTGGAGGTaGGAGTCCCCCTGTCATCATCACTGGGCCCAAAGG | + |
|
Preference number: 6 (lower is better) Translates to: WIQPGAHWADWR*ESPCHHHWAQR Trigger: CCTTTGGGCCCAGTGATGATGACAGGGGGACTCCCACCTCCAGTCAGCCCAGTGTGCCCCAGGCTGGATCCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000323022.10 ENST00000376251.5 ENST00000376265.2 |
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| CDS CAA 72 bp | GCTGGCCAGAGCCCCCTCCTCCTCATCCTCATCGCCTaGGGTCTCTGTCATGGAACCGGTGTCACTGGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: AGQSPLLLILIA*GLCHGTGVTGW Trigger: CCAGCCAGTGACACCGGTTCCATGACAGAGACCCAAGGCGATGAGGATGAGGAGGAGGGGGCTCTGGCCAGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000323022.10 ENST00000376251.5 ENST00000376265.2 |
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| CDS CAA 90 bp | GCCCGAGGTGACCGCTGGGCACTGGCCACTGCCACTGTCTTGTGCTaGCTGTGCTGGTTTCTTCGCTTAGGGGTCCCTAGGCCTGATGCC | + |
|
Preference number: 6 (lower is better) Translates to: ARGDRWALATATVLC*LCWFLRLGVPRPDA Trigger: GGCATCAGGCCTAGGGACCCCTAAGCGAAGAAACCAGCACAGCAAGCACAAGACAGTGGCAGTGGCCAGTGCCCAGCGGTCACCTCGGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000323022.10 ENST00000376265.2 |
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| CDS CCA 72 bp | CCTCCTCCTCATCCTCATCGCCTTGGGTCTCTGTCATaGAACCGGTGTCACTGGCTGGGAGGCTGGCATGGC | + |
|
Preference number: 6 (lower is better) Translates to: PPPHPHRLGSLS*NRCHWLGGWHG Trigger: GCCATGCCAGCCTCCCAGCCAGTGACACCGGTTCCATGACAGAGACCCAAGGCGATGAGGATGAGGAGGAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000323022.10 ENST00000376251.5 ENST00000376265.2 |
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| CDS CCA 72 bp | GGAAGACGAGCAACAGCACAGCCCAGTAGCAGGCATTaGACTTCACTGCCCGACGGCAGCGTGCCCGAAGGA | + |
|
Preference number: 6 (lower is better) Translates to: GRRATAQPSSRH*TSLPDGSVPEG Trigger: TCCTTCGGGCACGCTGCCGTCGGGCAGTGAAGTCCAATGCCTGCTACTGGGCTGTGCTGTTGCTCGTCTTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000323022.10 ENST00000376251.5 ENST00000376265.2 |
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| CDS CAA 90 bp | AAGAGTGCCCGAGGTGACCGCTGGGCACTGGCCACTGCCACTGTCTaGTGCTTGCTGTGCTGGTTTCTTCGCTTAGGGGTCCCTAGGCCT | + |
|
Preference number: 6 (lower is better) Translates to: KSARGDRWALATATV*CLLCWFLRLGVPRP Trigger: AGGCCTAGGGACCCCTAAGCGAAGAAACCAGCACAGCAAGCACAAGACAGTGGCAGTGGCCAGTGCCCAGCGGTCACCTCGGGCACTCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000323022.10 ENST00000376265.2 |
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| CDS GCA 72 bp | GGTGACCGCTGGGCACTGGCCACTGCCACTGTCTTGTaGTTGCTGTGCTGGTTTCTTCGCTTAGGGGTCCCT | + |
|
Preference number: 6 (lower is better) Translates to: GDRWALATATVL*LLCWFLRLGVP Trigger: AGGGACCCCTAAGCGAAGAAACCAGCACAGCAAGCACAAGACAGTGGCAGTGGCCAGTGCCCAGCGGTCACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000323022.10 ENST00000376265.2 |
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| CDS GCA 72 bp | TCATCCAGCGTCAGGCGACACGCATCTGCAATCTCCTaGTTGGCCAGGGCCACGAAACGTGGGTCTCGAGCA | + |
|
Preference number: 6 (lower is better) Translates to: SSSVRRHASAIS*LARATKRGSRA Trigger: TGCTCGAGACCCACGTTTCGTGGCCCTGGCCAAGCAGGAGATTGCAGATGCGTGTCGCCTGACGCTGGATGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000323022.10 ENST00000376251.5 ENST00000376265.2 |
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| CDS CCA 72 bp | GCACACATCGGAGCACTGAGATGCCCAAGGGCTGCATaGCACCCACCTCCACCAAGGTGGTCTCTAGGATGC | + |
|
Preference number: 6 (lower is better) Translates to: AHIGALRCPRAA*HPPPPRWSLGC Trigger: GCATCCTAGAGACCACCTTGGTGGAGGTGGGTGCCATGCAGCCCTTGGGCATCTCAGTGCTCCGATGTGTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000323022.10 ENST00000376251.5 ENST00000376265.2 |
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| CDS CCA 72 bp | AGGCGCTGCCCTCAGGGATGGGTACCACCTTCTCCTTaGGTACAACTTCCTGCAGGAGTTCCACACCCCCTG | + |
|
Preference number: 6 (lower is better) Translates to: RRCPQGWVPPSP*VQLPAGVPHPL Trigger: CAGGGGGTGTGGAACTCCTGCAGGAAGTTGTACCCAAGGAGAAGGTGGTACCCATCCCTGAGGGCAGCGCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000323022.10 ENST00000376251.5 ENST00000376265.2 |
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| CDS CCA 72 bp | CCAGCGTCAGGCGACACGCATCTGCAATCTCCTGCTTaGCCAGGGCCACGAAACGTGGGTCTCGAGCAAAGA | + |
|
Preference number: 6 (lower is better) Translates to: PASGDTHLQSPA*PGPRNVGLEQR Trigger: TCTTTGCTCGAGACCCACGTTTCGTGGCCCTGGCCAAGCAGGAGATTGCAGATGCGTGTCGCCTGACGCTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000323022.10 ENST00000376251.5 ENST00000376265.2 |
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| CDS CAA 72 bp | TCCAGCGTCAGGCGACACGCATCTGCAATCTCCTGCTaGGCCAGGGCCACGAAACGTGGGTCTCGAGCAAAG | + |
|
Preference number: 6 (lower is better) Translates to: SSVRRHASAISC*ARATKRGSRAK Trigger: CTTTGCTCGAGACCCACGTTTCGTGGCCCTGGCCAAGCAGGAGATTGCAGATGCGTGTCGCCTGACGCTGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000323022.10 ENST00000376251.5 ENST00000376265.2 |
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| CDS CAA 90 bp | AGGCAGAAGAAGGCGCTGCCCTCAGGGATGGGTACCACCTTCTCCTaGGGTACAACTTCCTGCAGGAGTTCCACACCCCCTGCACCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: RQKKALPSGMGTTFS*GTTSCRSSTPPAPS Trigger: AGAGGGTGCAGGGGGTGTGGAACTCCTGCAGGAAGTTGTACCCAAGGAGAAGGTGGTACCCATCCCTGAGGGCAGCGCCTTCTTCTGCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000323022.10 ENST00000376251.5 ENST00000376265.2 |
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| CDS CAA 90 bp | TCCATCTCATCCAGCGTCAGGCGACACGCATCTGCAATCTCCTGCTaGGCCAGGGCCACGAAACGTGGGTCTCGAGCAAAGAGGCCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: SISSSVRRHASAISC*ARATKRGSRAKRPR Trigger: TCTGGGCCTCTTTGCTCGAGACCCACGTTTCGTGGCCCTGGCCAAGCAGGAGATTGCAGATGCGTGTCGCCTGACGCTGGATGAGATGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000323022.10 ENST00000376251.5 ENST00000376265.2 |
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| CDS CAA 90 bp | GCCCCACCAGCTCATCACTACCTCCTCCTACCAATACCCCAGAGCTaGCCAGGGAAGAACTGGAGGGCAGTCAGAGAGGGCAGAGGATGG | + |
|
Preference number: 6 (lower is better) Translates to: APPAHHYLLLPIPQS*PGKNWRAVREGRGW Trigger: CCATCCTCTGCCCTCTCTGACTGCCCTCCAGTTCTTCCCTGGCAAGCTCTGGGGTATTGGTAGGAGGAGGTAGTGATGAGCTGGTGGGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000481035.1 |
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| CDS TCA 72 bp | AGGCAGAGACACAGAAATCCCGGAGCCCCGGCGAGCTaGGGGCTGGGAGACCATCGTGGCTTTGTTAGTTTC | + |
|
Preference number: 6 (lower is better) Translates to: RQRHRNPGAPAS*GLGDHRGFVSF Trigger: GAAACTAACAAAGCCACGATGGTCTCCCAGCCCTCAGCTCGCCGGGGCTCCGGGATTTCTGTGTCTCTGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000323022.10 ENST00000376251.5 ENST00000376265.2 |
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| CDS GCA 72 bp | CTCCTCCTCCTCCTCCATGTCTGCTCCTTCCCTCCTTaGACCCTCCTCTTCCTCTTTCTCCACACCAGGCAC | + |
|
Preference number: 6 (lower is better) Translates to: LLLLLHVCSFPP*TLLFLFLHTRH Trigger: GTGCCTGGTGTGGAGAAAGAGGAAGAGGAGGGTGCAAGGAGGGAAGGAGCAGACATGGAGGAGGAGGAGGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000323022.10 ENST00000376251.5 ENST00000376265.2 |
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| CDS CCA 72 bp | GCACTGGCCACTGCCACTGTCTTGTGCTTGCTGTGCTaGTTTCTTCGCTTAGGGGTCCCTAGGCCTGATGCC | + |
|
Preference number: 6 (lower is better) Translates to: ALATATVLCLLC*FLRLGVPRPDA Trigger: GGCATCAGGCCTAGGGACCCCTAAGCGAAGAAACCAGCACAGCAAGCACAAGACAGTGGCAGTGGCCAGTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000323022.10 ENST00000376265.2 |
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| CDS CCA 72 bp | GACACAGAAATCCCGGAGCCCCGGCGAGCTGAGGGCTaGGAGACCATCGTGGCTTTGTTAGTTTCCAAGTCC | + |
|
Preference number: 6 (lower is better) Translates to: DTEIPEPRRAEG*ETIVALLVSKS Trigger: GGACTTGGAAACTAACAAAGCCACGATGGTCTCCCAGCCCTCAGCTCGCCGGGGCTCCGGGATTTCTGTGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000323022.10 ENST00000376251.5 ENST00000376265.2 |
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| CDS CAA 72 bp | AAGGCGCTGCCCTCAGGGATGGGTACCACCTTCTCCTaGGGTACAACTTCCTGCAGGAGTTCCACACCCCCT | + |
|
Preference number: 6 (lower is better) Translates to: KALPSGMGTTFS*GTTSCRSSTPP Trigger: AGGGGGTGTGGAACTCCTGCAGGAAGTTGTACCCAAGGAGAAGGTGGTACCCATCCCTGAGGGCAGCGCCTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000323022.10 ENST00000376251.5 ENST00000376265.2 |
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| CDS CAA 72 bp | GAGCTGGTTCCCTGTGCCAGCAGGTCACTGGCAGCATaGTCCATCTCATCCAGCGTCAGGCGACACGCATCT | + |
|
Preference number: 6 (lower is better) Translates to: ELVPCASRSLAA*SISSSVRRHAS Trigger: AGATGCGTGTCGCCTGACGCTGGATGAGATGGACAATGCTGCCAGTGACCTGCTGGCACAGGGAACCAGCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000323022.10 ENST00000376251.5 ENST00000376265.2 |
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| CDS CAA 72 bp | CTGTTGTCTCCTCAGCATCTAGAACAGGACCCGCCCTaGTCCTTGGCAGTGCCTGCATCTCCACTGGCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: LLSPQHLEQDPP*SLAVPASPLAR Trigger: CCTGGCCAGTGGAGATGCAGGCACTGCCAAGGACAAGGGCGGGTCCTGTTCTAGATGCTGAGGAGACAACAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000480889.1 |
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| CDS CAA 90 bp | CTTCTTCCTCCTCCTCCTCCTCCTCCATGTCTGCTCCTTCCCTCCTaGCACCCTCCTCTTCCTCTTTCTCCACACCAGGCACCAGGCCTT | + |
|
Preference number: 6 (lower is better) Translates to: LLPPPPPPPCLLLPS*HPPLPLSPHQAPGL Trigger: AAGGCCTGGTGCCTGGTGTGGAGAAAGAGGAAGAGGAGGGTGCAAGGAGGGAAGGAGCAGACATGGAGGAGGAGGAGGAGGAGGAAGAAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000323022.10 ENST00000376251.5 ENST00000376265.2 |
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| CDS CAA 90 bp | CCCCTGTTGTCTCCTCAGCATCTAGAACAGGACCCGCCCTTGTCCTaGGCAGTGCCTGCATCTCCACTGGCCAGGTTGTCCACAGCAATG | + |
|
Preference number: 6 (lower is better) Translates to: PLLSPQHLEQDPPLS*AVPASPLARLSTAM Trigger: CATTGCTGTGGACAACCTGGCCAGTGGAGATGCAGGCACTGCCAAGGACAAGGGCGGGTCCTGTTCTAGATGCTGAGGAGACAACAGGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000480889.1 |
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| CDS TCA 72 bp | GCATGGCTGCTGGTGGAGTGTGTGGAGCGAGTAGAATaGCTGAACCAGCGCAGACGTCCACGCCTCCTATTG | + |
|
Preference number: 6 (lower is better) Translates to: AWLLVECVERVE*LNQRRRPRLLL Trigger: CAATAGGAGGCGTGGACGTCTGCGCTGGTTCAGTCATTCTACTCGCTCCACACACTCCACCAGCAGCCATGC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000323022.10 ENST00000376251.5 ENST00000376265.2 |
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| CDS GCA 72 bp | GGGATGGGTACCACCTTCTCCTTGGGTACAACTTCCTaGAGGAGTTCCACACCCCCTGCACCCTCTTCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: GMGTTFSLGTTS*RSSTPPAPSSS Trigger: AGAGGAAGAGGGTGCAGGGGGTGTGGAACTCCTGCAGGAAGTTGTACCCAAGGAGAAGGTGGTACCCATCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000323022.10 ENST00000376251.5 ENST00000376265.2 |
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| CDS GCA 72 bp | ATTGTCCATCTCATCCAGCGTCAGGCGACACGCATCTaGAATCTCCTGCTTGGCCAGGGCCACGAAACGTGG | + |
|
Preference number: 6 (lower is better) Translates to: IVHLIQRQATRI*NLLLGQGHETW Trigger: CCACGTTTCGTGGCCCTGGCCAAGCAGGAGATTGCAGATGCGTGTCGCCTGACGCTGGATGAGATGGACAAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000323022.10 ENST00000376251.5 ENST00000376265.2 |
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| CDS CCA 72 bp | GCTGACTGGAGGTGGGAGTCCCCCTGTCATCATCACTaGGCCCAAAGGAGAGTGAATCTGGAAGTCTGTCCC | + |
|
Preference number: 6 (lower is better) Translates to: ADWRWESPCHHH*AQRRVNLEVCP Trigger: GGGACAGACTTCCAGATTCACTCTCCTTTGGGCCCAGTGATGATGACAGGGGGACTCCCACCTCCAGTCAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000323022.10 ENST00000376251.5 ENST00000376265.2 |
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| CDS CCA 72 bp | GCCCTGAATTTCGCCCACGATGATAGGTGCCTGGGATaGGTAAATCCTCACAACTGCCCTGGCGCTGCAGAC | + |
|
Preference number: 6 (lower is better) Translates to: ALNFAHDDRCLG*VNPHNCPGAAD Trigger: GTCTGCAGCGCCAGGGCAGTTGTGAGGATTTACCCATCCCAGGCACCTATCATCGTGGGCGAAATTCAGGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000323022.10 ENST00000376251.5 ENST00000376265.2 |
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| CDS CCA 72 bp | GGGAGAGGATGGACTCCTCGTCGCTATAGAGAGAGCTaGTTCCCTGTGCCAGCAGGTCACTGGCAGCATTGT | + |
|
Preference number: 6 (lower is better) Translates to: GRGWTPRRYRES*FPVPAGHWQHC Trigger: ACAATGCTGCCAGTGACCTGCTGGCACAGGGAACCAGCTCTCTCTATAGCGACGAGGAGTCCATCCTCTCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000323022.10 ENST00000376251.5 ENST00000376265.2 |
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| CDS CCA 72 bp | CGTCTCCCAAGTCCTCCTCATCGAAGCGGGAGAGGATaGACTCCTCGTCGCTATAGAGAGAGCTGGTTCCCT | + |
|
Preference number: 6 (lower is better) Translates to: RLPSPPHRSGRG*TPRRYRESWFP Trigger: AGGGAACCAGCTCTCTCTATAGCGACGAGGAGTCCATCCTCTCCCGCTTCGATGAGGAGGACTTGGGAGACG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000323022.10 ENST00000376251.5 ENST00000376265.2 |
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| CDS TCA 72 bp | AGTCCCCCTGTCATCATCACTGGGCCCAAAGGAGAGTaGATCTGGAAGTCTGTCCCCGACAGGCAGAGACAC | + |
|
Preference number: 6 (lower is better) Translates to: SPPVIITGPKGE*IWKSVPDRQRH Trigger: GTGTCTCTGCCTGTCGGGGACAGACTTCCAGATTCACTCTCCTTTGGGCCCAGTGATGATGACAGGGGGACT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000323022.10 ENST00000376251.5 ENST00000376265.2 |
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| CDS GCA 72 bp | CCCTATTGGGCCCTGAATTTCGCCCACGATGATAGGTaGCTGGGATGGGTAAATCCTCACAACTGCCCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: PYWALNFAHDDR*LGWVNPHNCPG Trigger: GCCAGGGCAGTTGTGAGGATTTACCCATCCCAGGCACCTATCATCGTGGGCGAAATTCAGGGCCCAATAGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000323022.10 ENST00000376251.5 ENST00000376265.2 |
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| CDS CCA 72 bp | CGTACTCCACCTGCTCCAGGTTGTGGTTGGCAGTGTTaGAGTCGTCCTCAGGGAAGGGGATGTAAACTCCCA | + |
|
Preference number: 6 (lower is better) Translates to: RTPPAPGCGWQC*SRPQGRGCKLP Trigger: TGGGAGTTTACATCCCCTTCCCTGAGGACGACTCCAACACTGCCAACCACAACCTGGAGCAGGTGGAGTACG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000323022.10 ENST00000376251.5 ENST00000376265.2 |
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| CDS CCA 72 bp | TATAGAGAGAGCTGGTTCCCTGTGCCAGCAGGTCACTaGCAGCATTGTCCATCTCATCCAGCGTCAGGCGAC | + |
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Preference number: 6 (lower is better) Translates to: YRESWFPVPAGH*QHCPSHPASGD Trigger: GTCGCCTGACGCTGGATGAGATGGACAATGCTGCCAGTGACCTGCTGGCACAGGGAACCAGCTCTCTCTATA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000323022.10 ENST00000376251.5 ENST00000376265.2 |
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| CDS CAA 72 bp | ATGGGGCCGTGGTCCTCTGCATATGCATCGATGGCCTaGTATAGCAGTGCAGGCCAGCCTTCAAAGGTGGAG | + |
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Preference number: 6 (lower is better) Translates to: MGPWSSAYASMA*YSSAGQPSKVE Trigger: CTCCACCTTTGAAGGCTGGCCTGCACTGCTATACAAGGCCATCGATGCATATGCAGAGGACCACGGCCCCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000323022.10 ENST00000376251.5 ENST00000376265.2 |
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| CDS CCA 72 bp | TATAGATGGGGCCGTGGTCCTCTGCATATGCATCGATaGCCTTGTATAGCAGTGCAGGCCAGCCTTCAAAGG | + |
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Preference number: 6 (lower is better) Translates to: YRWGRGPLHMHR*PCIAVQASLQR Trigger: CCTTTGAAGGCTGGCCTGCACTGCTATACAAGGCCATCGATGCATATGCAGAGGACCACGGCCCCATCTATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000323022.10 ENST00000376251.5 ENST00000376265.2 |
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| CDS CAA 72 bp | CTGTCCTCAGAGCTCTCGCCAAGGTGGCCACCATTATaGACTTCAGTGACGGCAATATCCACTATGCTGCCC | + |
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Preference number: 6 (lower is better) Translates to: LSSELSPRWPPL*TSVTAISTMLP Trigger: GGGCAGCATAGTGGATATTGCCGTCACTGAAGTCAATAATGGTGGCCACCTTGGCGAGAGCTCTGAGGACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000323022.10 ENST00000376251.5 ENST00000376265.2 |
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| CDS TCA 72 bp | CAGAGGATGGGGCAGTGGAAACTTTGGGGCATCTATTaGCTGGGTAATGAGATGCAGCAGTCGGAGGTTTGG | + |
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Preference number: 6 (lower is better) Translates to: QRMGQWKLWGIY*LGNEMQQSEVW Trigger: CCAAACCTCCGACTGCTGCATCTCATTACCCAGTCAATAGATGCCCCAAAGTTTCCACTGCCCCATCCTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000481035.1 |
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| CDS CCA 72 bp | GGGCTAGGGGACTGTGTAGGGCAATACATTGTCCCCTaGATTCTAGGTAAGGGTATAGAGGGCATACTTGGC | + |
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Preference number: 6 (lower is better) Translates to: GLGDCVGQYIVP*ILGKGIEGILG Trigger: GCCAAGTATGCCCTCTATACCCTTACCTAGAATCCAGGGGACAATGTATTGCCCTACACAGTCCCCTAGCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000481035.1 |
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| CDS CCA 72 bp | GAAGAGAATGATGAAATAGATGCACACCAACATTCCTaGGAAGAAGGGGCCACCATATGCCATGATACCATC | + |
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Preference number: 6 (lower is better) Translates to: EENDEIDAHQHS*EEGATICHDTI Trigger: GATGGTATCATGGCATATGGTGGCCCCTTCTTCCCAGGAATGTTGGTGTGCATCTATTTCATCATTCTCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000323022.10 ENST00000376251.5 ENST00000376265.2 ENST00000480889.1 |
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