RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CACNA1D (Homo sapiens)

Ensembl gene IDs: ENSG00000157388

Ensembl transcript IDs: ENST00000288139.11, ENST00000350061.11, ENST00000422281.7, ENST00000464429.1, ENST00000481085.5, ENST00000481478.1, ENST00000498251.2, ENST00000636138.1, ENST00000636448.1, ENST00000636480.1, ENST00000636570.1, ENST00000636581.2, ENST00000636595.1, ENST00000636627.1, ENST00000636629.1, ENST00000636633.2, ENST00000636723.1, ENST00000636938.1, ENST00000636999.2, ENST00000637078.1, ENST00000637081.1, ENST00000637301.1, ENST00000637424.1, ENST00000637589.2, ENST00000637714.1, ENST00000637844.1, ENST00000638120.1, ENST00000640483.1, ENST00000645528.2

Found 2075 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCCTCCTCACCCATCCTCTGTGAGAGGGCGGGGCCTGCTGTTTCCTaGAGCTGGGGCCGAGCGCATGGTACTCTGCCAGGCTCAACCGCT +
Preference number: 1 (lower is better)
Translates to: ASSPILCERAGPAVS*SWGRAHGTLPGSTA
Trigger: AGCGGTTGAGCCTGGCAGAGTACCATGCGCTCGGCCCCAGCTGCAGGAAACAGCAGGCCCCGCCCTCTCACAGAGGATGGGTGAGGAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
3UTR GCA 90 bp CGGGCTCGTCTGTGTACCAGGAGCTGCGGTGCAGGGACGGCAGGCTaGCGTTCACCTGGTCCAGGGCCTCTGACTGCTCCACTTGGATCA +
Preference number: 1 (lower is better)
Translates to: RARLCTRSCGAGTAG*RSPGPGPLTAPLGS
Trigger: TGATCCAAGTGGAGCAGTCAGAGGCCCTGGACCAGGTGAACGGCAGCCTGCCGTCCCTGCACCGCAGCTCCTGGTACACAGACGAGCCCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR CCA 90 bp TCACCCATCCTCTGTGAGAGGGCGGGGCCTGCTGTTTCCTGCAGCTaGGGCCGAGCGCATGGTACTCTGCCAGGCTCAACCGCTTGGGAC +
Preference number: 1 (lower is better)
Translates to: SPILCERAGPAVSCS*GRAHGTLPGSTAWD
Trigger: GTCCCAAGCGGTTGAGCCTGGCAGAGTACCATGCGCTCGGCCCCAGCTGCAGGAAACAGCAGGCCCCGCCCTCTCACAGAGGATGGGTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
3UTR CCA 90 bp GTTGCTGCATTAGATGCAGAGGCAGGGCCGTGCGATGGGGGAAGATaGGAGACGACGGGACCTCTTCCTGGCTGCTCTGCCGGCGCAGGC +
Preference number: 1 (lower is better)
Translates to: VAALDAEAGPCDGGR*ETTGPLPGCSAGAG
Trigger: GCCTGCGCCGGCAGAGCAGCCAGGAAGAGGTCCCGTCGTCTCCCATCTTCCCCCATCGCACGGCCCTGCCTCTGCATCTAATGCAGCAAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR CCA 90 bp CCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGTACATaGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGC +
Preference number: 1 (lower is better)
Translates to: PAAMPSVGWAWCPGT*EKQTPQQCPSGQWG
Trigger: GCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTACCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
3UTR CCA 90 bp CCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTaGTACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACA +
Preference number: 1 (lower is better)
Translates to: PAPRRHAFSWVGLVP*YMGEADSTAVPIWT
Trigger: TGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTACCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
3UTR GCA 90 bp TTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTaGCCTGGTACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCT +
Preference number: 1 (lower is better)
Translates to: FPLHPAAMPSVGWAW*PGTWEKQTPQQCPS
Trigger: AGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTACCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
3UTR CCA 90 bp AACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTaGTGCCCTGGTACATGGGAGAAGCAGACTCCACAGCAGTGCCCA +
Preference number: 1 (lower is better)
Translates to: NFPLHPAAMPSVGWA*CPGTWEKQTPQQCP
Trigger: TGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTACCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
3UTR CCA 90 bp AGGGCCGTGCGATGGGGGAAGATGGGAGACGACGGGACCTCTTCCTaGCTGCTCTGCCGGCGCAGGCACTCAAAGTTGAAGGAGGATCTC +
Preference number: 1 (lower is better)
Translates to: RAVRWGKMGDDGTSS*LLCRRRHSKLKEDL
Trigger: GAGATCCTCCTTCAACTTTGAGTGCCTGCGCCGGCAGAGCAGCCAGGAAGAGGTCCCGTCGTCTCCCATCTTCCCCCATCGCACGGCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR GCA 90 bp GCTTCCTGGCCTGTCCACTTCTCACTGTATTCTGGACTGGGTCTCTaGAGAGAGCAGGGCCGGACGCTCAGGAGGTCATGGCGGACTGGC +
Preference number: 1 (lower is better)
Translates to: ASWPVHFSLYSGLGL*REQGRTLRRSWRTG
Trigger: GCCAGTCCGCCATGACCTCCTGAGCGTCCGGCCCTGCTCTCTGCAGAGACCCAGTCCAGAATACAGTGAGAAGTGGACAGGCCAGGAAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
3UTR CCA 90 bp TCTCTGCAGAGAGCAGGGCCGGACGCTCAGGAGGTCATGGCGGACTaGCATACAAAAGGAACTCTGTCAGCTCAGCGCCGAGGGGCCTGT +
Preference number: 1 (lower is better)
Translates to: SLQRAGPDAQEVMAD*HTKGTLSAQRRGAC
Trigger: ACAGGCCCCTCGGCGCTGAGCTGACAGAGTTCCTTTTGTATGCCAGTCCGCCATGACCTCCTGAGCGTCCGGCCCTGCTCTCTGCAGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
3UTR TCA 90 bp CTGAGGCCAGAGCCAGTCTGCCCCTCGCTGGGGGCTACAAGGTGGTaGTGCATATCATTTCATCCGCCAGGTCCTCCTCATCCCTCCCAG +
Preference number: 1 (lower is better)
Translates to: LRPEPVCPSLGATRW*CISFHPPGPPHPSQ
Trigger: CTGGGAGGGATGAGGAGGACCTGGCGGATGAAATGATATGCATCACCACCTTGTAGCCCCCAGCGAGGGGCAGACTGGCTCTGGCCTCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR CCA 90 bp ACCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTaGGCCTGGTGCCCTGGTACATGGGAGAAGCAGACTCCACAGCAG +
Preference number: 1 (lower is better)
Translates to: TFNFPLHPAAMPSVG*AWCPGTWEKQTPQQ
Trigger: CTGCTGTGGAGTCTGCTTCTCCCATGTACCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
3UTR CCA 90 bp GCCATGATCTGTTGCTGCATTAGATGCAGAGGCAGGGCCGTGCGATaGGGGAAGATGGGAGACGACGGGACCTCTTCCTGGCTGCTCTGC +
Preference number: 1 (lower is better)
Translates to: AMICCCIRCRGRAVR*GKMGDDGTSSWLLC
Trigger: GCAGAGCAGCCAGGAAGAGGTCCCGTCGTCTCCCATCTTCCCCCATCGCACGGCCCTGCCTCTGCATCTAATGCAGCAACAGATCATGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR GCA 90 bp GGTAGCCTCGGGGCCTCTCAGAGTCGATGTTTCTGCCTGGGTATCTaGTGTAGTAGCCATAGTTTTGCCTGCTCCAGGTGGGCGAGCTGT +
Preference number: 1 (lower is better)
Translates to: GSLGASQSRCFCLGI*CSSHSFACSRWASC
Trigger: ACAGCTCGCCCACCTGGAGCAGGCAAAACTATGGCTACTACAGCAGATACCCAGGCAGAAACATCGACTCTGAGAGGCCCCGAGGCTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR GCA 90 bp CCTTCGGATATCAGGACTGCCTCCACCAAGCTGTCCGCACTCCTCTaGTTGTCGCTGTTTTTGTTCCGGAAGCTGCTGGGGACAGTCAGG +
Preference number: 1 (lower is better)
Translates to: PSDIRTASTKLSALL*LSLFLFRKLLGTVR
Trigger: CCTGACTGTCCCCAGCAGCTTCCGGAACAAAAACAGCGACAAGCAGAGGAGTGCGGACAGCTTGGTGGAGGCAGTCCTGATATCCGAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR CCA 90 bp GGGATGATGGTAGCCTCGGGGCCTCTCAGAGTCGATGTTTCTGCCTaGGTATCTGCTGTAGTAGCCATAGTTTTGCCTGCTCCAGGTGGG +
Preference number: 1 (lower is better)
Translates to: GMMVASGPLRVDVSA*VSAVVAIVLPAPGG
Trigger: CCCACCTGGAGCAGGCAAAACTATGGCTACTACAGCAGATACCCAGGCAGAAACATCGACTCTGAGAGGCCCCGAGGCTACCATCATCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR TCA 90 bp GTCGATGGTGAGGTCACAGGCATCAGCGATTTCGTGTTTTGTTGCTaGCACAAATTTTGGGTCCCTTGCATAGCGTCCCAAGCCTTCGGA +
Preference number: 1 (lower is better)
Translates to: VDGEVTGISDFVFCC*HKFWVPCIASQAFG
Trigger: TCCGAAGGCTTGGGACGCTATGCAAGGGACCCAAAATTTGTGTCAGCAACAAAACACGAAATCGCTGATGCCTGTGACCTCACCATCGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR GCA 90 bp AGGATAAGAATATCCATAATTTCAGAGCTGCCCTGGCACAGTACCTaGCCTGTCGGAGGCTCTCACTGGCAAATGACAGCTCTGTGCAAG +
Preference number: 1 (lower is better)
Translates to: RIRISIISELPWHST*PVGGSHWQMTALCK
Trigger: CTTGCACAGAGCTGTCATTTGCCAGTGAGAGCCTCCGACAGGGCAGGTACTGTGCCAGGGCAGCTCTGAAATTATGGATATTCTTATCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
3UTR CCA 90 bp GAAGGAACCAGGAGGATAAGAATATCCATAATTTCAGAGCTGCCCTaGCACAGTACCTGCCCTGTCGGAGGCTCTCACTGGCAAATGACA +
Preference number: 1 (lower is better)
Translates to: EGTRRIRISIISELP*HSTCPVGGSHWQMT
Trigger: TGTCATTTGCCAGTGAGAGCCTCCGACAGGGCAGGTACTGTGCCAGGGCAGCTCTGAAATTATGGATATTCTTATCCTCCTGGTTCCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
3UTR CCA 90 bp GATCATCGCCTCTATCAGACACTTAGGGTCCTGGTCTGGCAATTTTaGCCTGATGTGATGCCACAAGACCCAACAGAGAGAGACACAGAG +
Preference number: 1 (lower is better)
Translates to: DHRLYQTLRVLVWQF*PDVMPQDPTERDTE
Trigger: CTCTGTGTCTCTCTCTGTTGGGTCTTGTGGCATCACATCAGGCCAAAATTGCCAGACCAGGACCCTAAGTGTCTGATAGAGGCGATGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
3UTR GCA 90 bp AACCGTAACTATGGATACCCAAGGGGCAGAGCAGCCAGCTGGACCTaGTCTGTAATTCACTTACTTACTTACCAGAGGGTGGTTCAAGTC +
Preference number: 1 (lower is better)
Translates to: NRNYGYPRGRAASWT*SVIHLLTYQRVVQV
Trigger: GACTTGAACCACCCTCTGGTAAGTAAGTAAGTGAATTACAGAGCAGGTCCAGCTGGCTGCTCTGCCCCTTGGGTATCCATAGTTACGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
3UTR TCA 90 bp TGGTTTTGGCATGCGGGTGTATGTGTTAGTTTCAATGGGTGTATCTaGGCTTCCTGGCCTGTCCACTTCTCACTGTATTCTGGACTGGGT +
Preference number: 1 (lower is better)
Translates to: WFWHAGVCVSFNGCI*ASWPVHFSLYSGLG
Trigger: ACCCAGTCCAGAATACAGTGAGAAGTGGACAGGCCAGGAAGCTCAGATACACCCATTGAAACTAACACATACACCCGCATGCCAAAACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
3UTR GCA 90 bp GGGAAGAATGATGCCCATTTTCAGACACATGCTCAAGGTTCCCAATaGTGGGCCGCTTTCCATGGGCAGCTTTGGACATATTGGCATTAT +
Preference number: 1 (lower is better)
Translates to: GKNDAHFQTHAQGSQ*WAAFHGQLWTYWHY
Trigger: ATAATGCCAATATGTCCAAAGCTGCCCATGGAAAGCGGCCCAGCATTGGGAACCTTGAGCATGTGTCTGAAAATGGGCATCATTCTTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR CCA 90 bp AGAGAAAACCGTAACTATGGATACCCAAGGGGCAGAGCAGCCAGCTaGACCTGCTCTGTAATTCACTTACTTACTTACCAGAGGGTGGTT +
Preference number: 1 (lower is better)
Translates to: RENRNYGYPRGRAAS*TCSVIHLLTYQRVV
Trigger: AACCACCCTCTGGTAAGTAAGTAAGTGAATTACAGAGCAGGTCCAGCTGGCTGCTCTGCCCCTTGGGTATCCATAGTTACGGTTTTCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
3UTR CCA 90 bp GGTGTCTTGGGCTCAGCATCAGATGTACAGACTCCAACCACCACTTaGAATCAGCTGAGAATTCAAGATCAGACACCCTTATCGACCAAC +
Preference number: 1 (lower is better)
Translates to: GVLGSASDVQTPTTT*NQLRIQDQTPLSTN
Trigger: GTTGGTCGATAAGGGTGTCTGATCTTGAATTCTCAGCTGATTCCAAGTGGTGGTTGGAGTCTGTACATCTGATGCTGAGCCCAAGACACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636938.1
3UTR TCA 90 bp GCTCAGCATCAGATGTACAGACTCCAACCACCACTTGGAATCAGCTaGGAATTCAAGATCAGACACCCTTATCGACCAACATCTTGGGCA +
Preference number: 1 (lower is better)
Translates to: AQHQMYRLQPPLGIS*EFKIRHPYRPTSWA
Trigger: TGCCCAAGATGTTGGTCGATAAGGGTGTCTGATCTTGAATTCTCAGCTGATTCCAAGTGGTGGTTGGAGTCTGTACATCTGATGCTGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636938.1
3UTR CCA 90 bp TTTGGAAAAGATCATCGCCTCTATCAGACACTTAGGGTCCTGGTCTaGCAATTTTGGCCTGATGTGATGCCACAAGACCCAACAGAGAGA +
Preference number: 1 (lower is better)
Translates to: FGKDHRLYQTLRVLV*QFWPDVMPQDPTER
Trigger: TCTCTCTGTTGGGTCTTGTGGCATCACATCAGGCCAAAATTGCCAGACCAGGACCCTAAGTGTCTGATAGAGGCGATGATCTTTTCCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
3UTR CCA 90 bp TTTCCTGTGGACACGTTAAGATGGAACCTGAGGTGTTGCCTGGATTaGTTTTGGCATGCGGGTGTATGTGTTAGTTTCAATGGGTGTATC +
Preference number: 1 (lower is better)
Translates to: FPVDTLRWNLRCCLD*FWHAGVCVSFNGCI
Trigger: GATACACCCATTGAAACTAACACATACACCCGCATGCCAAAACCAATCCAGGCAACACCTCAGGTTCCATCTTAACGTGTCCACAGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
3UTR CCA 90 bp TTTTCAGACACATGCTCAAGGTTCCCAATGCTGGGCCGCTTTCCATaGGCAGCTTTGGACATATTGGCATTATTGAGATTGGCATTTGTT +
Preference number: 1 (lower is better)
Translates to: FSDTCSRFPMLGRFP*AALDILALLRLAFV
Trigger: AACAAATGCCAATCTCAATAATGCCAATATGTCCAAAGCTGCCCATGGAAAGCGGCCCAGCATTGGGAACCTTGAGCATGTGTCTGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR CCA 90 bp GACAGTCAGAAACCGACCATCGGAGTGATATTCTCTTATGTAAACTaGCGTCACATCACAGAAAACCTTATTTATGAGGTCCCATTGCCC +
Preference number: 1 (lower is better)
Translates to: DSQKPTIGVIFSYVN*RHITENLIYEVPLP
Trigger: GGGCAATGGGACCTCATAAATAAGGTTTTCTGTGATGTGACGCCAGTTTACATAAGAGAATATCACTCCGATGGTCGGTTTCTGACTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
3UTR TCA 90 bp ATTCTCTTATGTAAACTGGCGTCACATCACAGAAAACCTTATTTATaGGGTCCCATTGCCCTCGCAATAATCACTGGTAGCTGGGTTCTG +
Preference number: 1 (lower is better)
Translates to: ILLCKLASHHRKPYL*GPIALAIITGSWVL
Trigger: CAGAACCCAGCTACCAGTGATTATTGCGAGGGCAATGGGACCTCATAAATAAGGTTTTCTGTGATGTGACGCCAGTTTACATAAGAGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
3UTR TCA 90 bp TGGTTGCGAGTGCATTATTATTCCAGTTTACAGTTGCCCTTAGCGTaGCAGTCAGAAACCGACCATCGGAGTGATATTCTCTTATGTAAA +
Preference number: 1 (lower is better)
Translates to: WLRVHYYSSLQLPLA*QSETDHRSDILLCK
Trigger: TTTACATAAGAGAATATCACTCCGATGGTCGGTTTCTGACTGTCACGCTAAGGGCAACTGTAAACTGGAATAATAATGCACTCGCAACCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
3UTR GCA 90 bp ACCCATGGTGGATCCAAAGGTACAGTATCAAAATCATGGAACTCTTaGCCAAAGAAAAGACTGCAAATAGTCATCTGGTATATCTTGTGG +
Preference number: 1 (lower is better)
Translates to: THGGSKGTVSKSWNS*PKKRLQIVIWYILW
Trigger: CCACAAGATATACCAGATGACTATTTGCAGTCTTTTCTTTGGGCAAGAGTTCCATGATTTTGATACTGTACCTTTGGATCCACCATGGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
3UTR GCA 90 bp TTACCAGAGGGTGGTTCAAGTCAAACAAACAAAACCAAAGACAGTTaGAACCCATGGTGGATCCAAAGGTACAGTATCAAAATCATGGAA +
Preference number: 1 (lower is better)
Translates to: LPEGGSSQTNKTKDS*NPWWIQRYSIKIME
Trigger: TTCCATGATTTTGATACTGTACCTTTGGATCCACCATGGGTTGCAACTGTCTTTGGTTTTGTTTGTTTGACTTGAACCACCCTCTGGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
3UTR-3UTR CCA 90 bp AGGGACGGCAGGCTGCCGTTCACCTGGTCCAGGGCCTCTGACTGCTCCACTTGGGGCAGGGCCGTGCGATaGGGGAAGATGGGAGACGAC +
Preference number: 2 (lower is better)
Translates to: RDGRLPFTWSRASDCSTWGRAVR*GKMGDD
Trigger: GTCGTCTCCCATCTTCCCCCATCGCACGGCCCTGCC...CCAAGTGGAGCAGTCAGAGGCCCTGGACCAGGTGAACGGCAGCCTGCCGTCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR-3UTR GCA 90 bp GGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTGGGCCTGCTGTTTCCTaGAGCTGGGGCCGAGCGCAT +
Preference number: 2 (lower is better)
Translates to: GEADSTAVPIWTMGQGRSGPAVS*SWGRAH
Trigger: ATGCGCTCGGCCCCAGCTGCAGGAAACAGCAGGCCC...AGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
3UTR-3UTR GCA 90 bp AACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTCAGACTCCACAGCAGTaGCCATCTGGACAATGGGGC +
Preference number: 2 (lower is better)
Translates to: NFPLHPAAMPSVGWAWCPQTPQQ*PSGQWG
Trigger: GCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTG...AGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
3UTR-3UTR GCA 90 bp GAAAGTCCGGTAGGAGATGTCGGGCTCGTCTGTGTACCAGGAGCTGCGGTGCAGGGACCTCTTCCTGGCTaGTCTGCCGGCGCAGGCACT +
Preference number: 2 (lower is better)
Translates to: ESPVGDVGLVCVPGAAVQGPLPG*SAGAGT
Trigger: AGTGCCTGCGCCGGCAGAGCAGCCAGGAAGAGGTCC...CTGCACCGCAGCTCCTGGTACACAGACGAGCCCGACATCTCCTACCGGACTTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR-3UTR CCA 90 bp CCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCAGATGCCCATCTGGACAATaGGGCAGGGCAGGTCTGGCC +
Preference number: 2 (lower is better)
Translates to: PPCLQLGGPGALVHGRSRCPSGQ*GRAGLA
Trigger: GGCCAGACCTGCCCTGCCCCATTGTCCAGATGGGCA...TCTGCTTCTCCCATGTACCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
3UTR-3UTR CCA 90 bp CTCGTCTGTGTACCAGGAGCTGCGGTGCAGGGACGGCAGGCTGCCGTTCACCTGTGCGATGGGGGAAGATaGGAGACGACGGGACCTCTT +
Preference number: 2 (lower is better)
Translates to: LVCVPGAAVQGRQAAVHLCDGGR*ETTGPL
Trigger: AAGAGGTCCCGTCGTCTCCCATCTTCCCCCATCGCA...CAGGTGAACGGCAGCCTGCCGTCCCTGCACCGCAGCTCCTGGTACACAGACGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR-3UTR TCA 90 bp AACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGTTGGGCCCAGTGACTaGTATGCTAGACCGATGGCT +
Preference number: 2 (lower is better)
Translates to: NFPLHPAAMPSVGWAWCPVGPSD*YARPMA
Trigger: AGCCATCGGTCTAGCATATCAGTCACTGGGCCCAAC...AGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
3UTR-3UTR TCA 90 bp CGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCAACACTGGACCTTCTCTaGGGCTCCCGGTCATGCTTG +
Preference number: 2 (lower is better)
Translates to: RRHAFSWVGLVPWYMGEATLDLL*GSRSCL
Trigger: CAAGCATGACCGGGAGCCTCAGAGAAGGTCCAGTGT...TGCTTCTCCCATGTACCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR-3UTR GCA 90 bp CCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGAGCGCATGGTACTCTaGCAGGCTCAACCGCTTGGG +
Preference number: 2 (lower is better)
Translates to: PLTFPCTPPPCLQLGGPGERMVL*QAQPLG
Trigger: CCCAAGCGGTTGAGCCTGGCAGAGTACCATGCGCTC...ACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
3UTR-3UTR CCA 90 bp GCGCCGAGGGGCCTGTCAGTCTTTGGGAGTTCGGGCAAACTAGGGATGCAGGACGAGGAGTGCTTTGCTTaGAAGGGGTCTCCCTGGGGC +
Preference number: 2 (lower is better)
Translates to: APRGLSVFGSSGKLGMQDEECFA*KGSPWG
Trigger: GCCCCAGGGAGACCCCTTCCAAGCAAAGCACTCCTC...GTCCTGCATCCCTAGTTTGCCCGAACTCCCAAAGACTGACAGGCCCCTCGGCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
3UTR-3UTR CCA 90 bp ACCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGAAGGAGGATCTCCGGTaGGATGCTGGGGTGGGAGGT +
Preference number: 2 (lower is better)
Translates to: TFNFPLHPAAMPSVGWAWKEDLR*DAGVGG
Trigger: ACCTCCCACCCCAGCATCCCACCGGAGATCCTCCTT...CCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR-3UTR TCA 90 bp GCGCCGAGGGGCCTGTCAGTCTTTGGGAGTTCGGGCAAACTAGGGATGCAGGACGAAAAAGAACCACCGTaGGCAACGTCCGCGACAGGC +
Preference number: 2 (lower is better)
Translates to: APRGLSVFGSSGKLGMQDEKEPP*ATSATG
Trigger: GCCTGTCGCGGACGTTGCTCACGGTGGTTCTTTTTC...GTCCTGCATCCCTAGTTTGCCCGAACTCCCAAAGACTGACAGGCCCCTCGGCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
3UTR-3UTR GCA 90 bp AGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTGGGAGCGCATGGTACTCTaGCAGGCTCAACCGCTTGGG +
Preference number: 2 (lower is better)
Translates to: RSRLHSSAHLDNGAGQVWERMVL*QAQPLG
Trigger: CCCAAGCGGTTGAGCCTGGCAGAGTACCATGCGCTC...CCAGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
3UTR-3UTR CCA 90 bp ACCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGCCAGGCTCAACCGCTTaGGACCTGTTCCTACCAGGT +
Preference number: 2 (lower is better)
Translates to: TFNFPLHPAAMPSVGWAWPGSTA*DLFLPG
Trigger: ACCTGGTAGGAACAGGTCCCAAGCGGTTGAGCCTGG...CCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
3UTR-3UTR CCA 90 bp CCTGGTACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCCTGGGGCCGAGCGCATaGTACTCTGCCAGGCTCAAC +
Preference number: 2 (lower is better)
Translates to: PGTWEKQTPQQCPSGQWGLGPSA*YSARLN
Trigger: GTTGAGCCTGGCAGAGTACCATGCGCTCGGCCCCAG...GCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTACCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
3UTR-3UTR CCA 90 bp GGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTGCTGTTTCCTGCAGCTaGGGCCGAGCGCATGGTACT +
Preference number: 2 (lower is better)
Translates to: GEADSTAVPIWTMGQGRSAVSCS*GRAHGT
Trigger: AGTACCATGCGCTCGGCCCCAGCTGCAGGAAACAGC...AGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
3UTR-3UTR CCA 90 bp ATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGGCTGTTTCCTGCAGCTaGGGCCGAGCGCATGGTACT +
Preference number: 2 (lower is better)
Translates to: MGEADSTAVPIWTMGQGRAVSCS*GRAHGT
Trigger: AGTACCATGCGCTCGGCCCCAGCTGCAGGAAACAGC...CCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
3UTR-3UTR CCA 90 bp GAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTGGCTGTTTCCTGCAGCTaGGGCCGAGCGCATGGTACT +
Preference number: 2 (lower is better)
Translates to: EKQTPQQCPSGQWGRAGLAVSCS*GRAHGT
Trigger: AGTACCATGCGCTCGGCCCCAGCTGCAGGAAACAGC...CAGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
3UTR CAA 90 bp TCATCACCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTaGGGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCAGACTCCAC +
Preference number: 2 (lower is better)
Translates to: SSPLTFPCTPPPCLQ*GGPGALVHGRSRLH
Trigger: GTGGAGTCTGCTTCTCCCATGTACCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGGTGATGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
3UTR-3UTR TCA 90 bp GTGTATCTGAGCTTCCTGGCCTGTCCACTTCTCACTGTATTCTGGACTGGGTCTCCCTGGCTCCGCAGATaGGCCACGGCCCCGCTTCCA +
Preference number: 2 (lower is better)
Translates to: VYLSFLACPLLTVFWTGSPWLRR*ATAPLP
Trigger: TGGAAGCGGGGCCGTGGCTCATCTGCGGAGCCAGGG...AGACCCAGTCCAGAATACAGTGAGAAGTGGACAGGCCAGGAAGCTCAGATACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
3UTR-3UTR TCA 90 bp CCTGGTACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCCTGGTCCAGGGCCTCTaGCTGCTCCACTTGGATCAG +
Preference number: 2 (lower is better)
Translates to: PGTWEKQTPQQCPSGQWGLVQGL*LLHLDQ
Trigger: CTGATCCAAGTGGAGCAGTCAGAGGCCCTGGACCAG...GCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTACCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR-3UTR GCA 90 bp CGACACTCCAATCCTATAGATCACCACGTTGCTCCTCTGTCCCCAGCACCCCTTGGGCCTGCTGTTTCCTaGAGCTGGGGCCGAGCGCAT +
Preference number: 2 (lower is better)
Translates to: RHSNPIDHHVAPLSPAPLGPAVS*SWGRAH
Trigger: ATGCGCTCGGCCCCAGCTGCAGGAAACAGCAGGCCC...AAGGGGTGCTGGGGACAGAGGAGCAACGTGGTGATCTATAGGATTGGAGTGTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
3UTR-3UTR CCA 90 bp CCTGGTACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCACAGCAGTGCCCATCTaGACAATGGGGCAGGGCAGG +
Preference number: 2 (lower is better)
Translates to: PGTWEKQTPQQCPSGQWGTAVPI*TMGQGR
Trigger: CCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGT...GCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTACCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
3UTR CAA 90 bp CTGCAGCTGGGGCCGAGCGCATGGTACTCTGCCAGGCTCAACCGCTaGGGACCTGTTCCTACCAGGTTTATGGCTTTCTTGAGGCATGAC +
Preference number: 2 (lower is better)
Translates to: LQLGPSAWYSARLNR*GPVPTRFMAFLRHD
Trigger: GTCATGCCTCAAGAAAGCCATAAACCTGGTAGGAACAGGTCCCAAGCGGTTGAGCCTGGCAGAGTACCATGCGCTCGGCCCCAGCTGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
3UTR-3UTR TCA 90 bp CTTAAGCAGCACCACCAGTCCCCAGAGGACAAGAGCAGCTATATCTCATCCACCCTCACCCATCCTCTGTaGGAGGGCGGGGCCTGCTGT +
Preference number: 2 (lower is better)
Translates to: LKQHHQSPEDKSSYISSTLTHPL*EGGACC
Trigger: ACAGCAGGCCCCGCCCTCTCACAGAGGATGGGTGAG...GGTGGATGAGATATAGCTGCTCTTGTCCTCTGGGGACTGGTGGTGCTGCTTAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
3UTR-3UTR TCA 90 bp ACCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGCAGTTGCCCTTAGCGTaGCAGTCAGAAACCGACCAT +
Preference number: 2 (lower is better)
Translates to: TFNFPLHPAAMPSVGWAWQLPLA*QSETDH
Trigger: ATGGTCGGTTTCTGACTGTCACGCTAAGGGCAACTG...CCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
3UTR-3UTR TCA 90 bp TCCTGTGGACACGTTAAGATGGAACCTGAGGTGTTGCCTGGATTGGTTTTGGCACCCTGGCTCCGCAGATaGGCCACGGCCCCGCTTCCA +
Preference number: 2 (lower is better)
Translates to: SCGHVKMEPEVLPGLVLAPWLRR*ATAPLP
Trigger: TGGAAGCGGGGCCGTGGCTCATCTGCGGAGCCAGGG...TGCCAAAACCAATCCAGGCAACACCTCAGGTTCCATCTTAACGTGTCCACAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
3UTR-3UTR TCA 90 bp CGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCAAGCATTCCTCACTACTaGAATACTCCTGCTCCCCCA +
Preference number: 2 (lower is better)
Translates to: RRHAFSWVGLVPWYMGEASIPHY*NTPAPP
Trigger: TGGGGGAGCAGGAGTATTTCAGTAGTGAGGAATGCT...TGCTTCTCCCATGTACCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR-3UTR GCA 90 bp TCATCACCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCAGACTCCACAGCAGTaGCCATCTGGACAATGGGGC +
Preference number: 2 (lower is better)
Translates to: SSPLTFPCTPPPCLQLGGQTPQQ*PSGQWG
Trigger: GCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTG...CCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGGTGATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
3UTR-3UTR GCA 90 bp CCTGGTACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCCCTTTAACTTTCCCCTaGACCCCGCCGCCATGCCTT +
Preference number: 2 (lower is better)
Translates to: PGTWEKQTPQQCPSGQWGPLTFP*TPPPCL
Trigger: AAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGG...GCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTACCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
3UTR-3UTR CCA 90 bp TCATCACCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCAGGCTCAACCGCTTaGGACCTGTTCCTACCAGGT +
Preference number: 2 (lower is better)
Translates to: SSPLTFPCTPPPCLQLGGPGSTA*DLFLPG
Trigger: ACCTGGTAGGAACAGGTCCCAAGCGGTTGAGCCTGG...CCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGGTGATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
3UTR-3UTR CCA 90 bp CCTGGTACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCATGCCTTCAGTTGGGTaGGCCTGGTGCCCTGGTACA +
Preference number: 2 (lower is better)
Translates to: PGTWEKQTPQQCPSGQWGMPSVG*AWCPGT
Trigger: TGTACCAGGGCACCAGGCCCACCCAACTGAAGGCAT...GCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTACCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
3UTR-3UTR CCA 90 bp TCCCTTTCACGAAAAAGAACCACCGTGAGCAACGTCCGCGACAGGCAGCCCTGGTGGAAGGGGTCTCCCTaGGGCCTTGGGTCTGCTTTT +
Preference number: 2 (lower is better)
Translates to: SLSRKRTTVSNVRDRQPWWKGSP*GLGSAF
Trigger: AAAAGCAGACCCAAGGCCCCAGGGAGACCCCTTCCA...CCAGGGCTGCCTGTCGCGGACGTTGCTCACGGTGGTTCTTTTTCGTGAAAGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
3UTR-3UTR CCA 90 bp ACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCACAAGGTTCCCAATGCTaGGCCGCTTTCCATGGGCAG +
Preference number: 2 (lower is better)
Translates to: TWEKQTPQQCPSGQWGRAQGSQC*AAFHGQ
Trigger: CTGCCCATGGAAAGCGGCCCAGCATTGGGAACCTTG...TGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR-3UTR CCA 90 bp CCTGGTACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCTTTGCCTGCTCCAGGTaGGCGAGCTGTCATCCTCGT +
Preference number: 2 (lower is better)
Translates to: PGTWEKQTPQQCPSGQWGFACSR*ASCHPR
Trigger: ACGAGGATGACAGCTCGCCCACCTGGAGCAGGCAAA...GCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTACCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR CAA 90 bp TCGGATATCAGGACTGCCTCCACCAAGCTGTCCGCACTCCTCTGCTaGTCGCTGTTTTTGTTCCGGAAGCTGCTGGGGACAGTCAGGCTG +
Preference number: 2 (lower is better)
Translates to: SDIRTASTKLSALLC*SLFLFRKLLGTVRL
Trigger: CAGCCTGACTGTCCCCAGCAGCTTCCGGAACAAAAACAGCGACAAGCAGAGGAGTGCGGACAGCTTGGTGGAGGCAGTCCTGATATCCGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR-3UTR TCA 90 bp CCTCCTCACCCATCCTCTGTGAGAGGGCGGGGCCTGCTGTTTCCTGCAGCTGGGTGCTTGTGGGAAGAATaGTGCCCATTTTCAGACACA +
Preference number: 2 (lower is better)
Translates to: PPHPSSVRGRGLLFPAAGCLWEE*CPFSDT
Trigger: TGTGTCTGAAAATGGGCATCATTCTTCCCACAAGCA...CCCAGCTGCAGGAAACAGCAGGCCCCGCCCTCTCACAGAGGATGGGTGAGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR-3UTR GCA 90 bp AACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTTATCTCATCCACCTATaGATTTCTGCACCAGCGATG +
Preference number: 2 (lower is better)
Translates to: NFPLHPAAMPSVGWAWCPYLIHL*ISAPAM
Trigger: CATCGCTGGTGCAGAAATGCATAGGTGGATGAGATA...AGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
3UTR-3UTR GCA 90 bp CACCAGTCCCCAGAGGACAAGAGCAGCTATATCTCATCCACCTATGCATTTCTGCCGGTAGGGAGGGGTTaGTGGAGGGGTGGCCCACGA +
Preference number: 2 (lower is better)
Translates to: HQSPEDKSSYISSTYAFLPVGRG*WRGGPR
Trigger: TCGTGGGCCACCCCTCCAGCAACCCCTCCCTACCGG...CAGAAATGCATAGGTGGATGAGATATAGCTGCTCTTGTCCTCTGGGGACTGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR-3UTR CCA 90 bp ACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCATGGTGCCCTGGTACATaGGAGAAGCAGACTCCACAG +
Preference number: 2 (lower is better)
Translates to: TWEKQTPQQCPSGQWGRAWCPGT*EKQTPQ
Trigger: CTGTGGAGTCTGCTTCTCCCATGTACCAGGGCACCA...TGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
3UTR-3UTR CCA 90 bp ATGCATATCATTTCATCCGCCAGGTCCTCCTCATCCCTCCCAGGGTCTGGCTCTTCAGTTGGGTGGGCCTaGTGCCCTGGTACATGGGAG +
Preference number: 2 (lower is better)
Translates to: MHIISSARSSSSLPGSGSSVGWA*CPGTWE
Trigger: CTCCCATGTACCAGGGCACCAGGCCCACCCAACTGA...AGAGCCAGACCCTGGGAGGGATGAGGAGGACCTGGCGGATGAAATGATATGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR-3UTR CCA 90 bp CGGTGCAGGGACGGCAGGCTGCCGTTCACCTGGTCCAGGGCCTCTGACTGCTCCAGGACGCAGTGTATTTaGGGGAAAGGGTTTAAAAAT +
Preference number: 2 (lower is better)
Translates to: RCRDGRLPFTWSRASDCSRTQCI*GKGFKN
Trigger: ATTTTTAAACCCTTTCCCCCAAATACACTGCGTCCT...GGAGCAGTCAGAGGCCCTGGACCAGGTGAACGGCAGCCTGCCGTCCCTGCACCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR-3UTR CCA 90 bp TTCTTAAGCAGCACCACCAGTCCCCAGAGGACAAGAGCAGCTATATCTCATCCAGGCCCACATCCCCGTTaGCTCGGGGACGCACGTTCC +
Preference number: 2 (lower is better)
Translates to: FLSSTTSPQRTRAAISHPGPHPR*LGDARS
Trigger: GGAACGTGCGTCCCCGAGCCAACGGGGATGTGGGCC...TGGATGAGATATAGCTGCTCTTGTCCTCTGGGGACTGGTGGTGCTGCTTAAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR-3UTR TCA 90 bp AACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTCGTACAGTCAGAGTGTaGGTGCATTCTAATGAAAAC +
Preference number: 2 (lower is better)
Translates to: NFPLHPAAMPSVGWAWCPRTVRV*VHSNEN
Trigger: GTTTTCATTAGAATGCACTCACACTCTGACTGTACG...AGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
3UTR-3UTR TCA 90 bp CCTGGTACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCGGCCGGCAACTGCCATaGTCTGTTGCTGCATTAGAT +
Preference number: 2 (lower is better)
Translates to: PGTWEKQTPQQCPSGQWGGRQLP*SVAALD
Trigger: ATCTAATGCAGCAACAGATCATGGCAGTTGCCGGCC...GCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTACCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR-3UTR TCA 90 bp CACCAGTCCCCAGAGGACAAGAGCAGCTATATCTCATCCACCTATGCATTTCTGATAGTCCTGCCGGTGTaGGAGGGGGCCCACATCCCC +
Preference number: 2 (lower is better)
Translates to: HQSPEDKSSYISSTYAFLIVLPV*EGAHIP
Trigger: GGGGATGTGGGCCCCCTCTCACACCGGCAGGACTAT...CAGAAATGCATAGGTGGATGAGATATAGCTGCTCTTGTCCTCTGGGGACTGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR-3UTR GCA 90 bp ACCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGGCAGCCAGCTGGACCTaGTCTGTAATTCACTTACTT +
Preference number: 2 (lower is better)
Translates to: TFNFPLHPAAMPSVGWAWAASWT*SVIHLL
Trigger: AAGTAAGTGAATTACAGAGCAGGTCCAGCTGGCTGC...CCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
3UTR-3UTR GCA 90 bp CCTGGTACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCTATAGATCACCACGTTaGTCCTCTGTCCCCAGCACC +
Preference number: 2 (lower is better)
Translates to: PGTWEKQTPQQCPSGQWGYRSPR*SSVPST
Trigger: GGTGCTGGGGACAGAGGAGCAACGTGGTGATCTATA...GCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTACCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
3UTR-3UTR GCA 90 bp AACCGTAACTATGGATACCCAAGGGGCAGAGCAGCCAGCTGGACCTGCTCTGTAGCTCAAGGTTCCCAATaGTGGGCCGCTTTCCATGGG +
Preference number: 2 (lower is better)
Translates to: NRNYGYPRGRAASWTCSVAQGSQ*WAAFHG
Trigger: CCCATGGAAAGCGGCCCAGCATTGGGAACCTTGAGC...TACAGAGCAGGTCCAGCTGGCTGCTCTGCCCCTTGGGTATCCATAGTTACGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR-3UTR GCA 90 bp GGTGATGCATATCATTTCATCCGCCAGGTCCTCCTCATCCCTCCCAGGGTCTGGAAGCAGGGTGCTGGCTaGACTCTCCATCTCGTCGAT +
Preference number: 2 (lower is better)
Translates to: GDAYHFIRQVLLIPPRVWKQGAG*TLHLVD
Trigger: ATCGACGAGATGGAGAGTGCAGCCAGCACCCTGCTT...CCAGACCCTGGGAGGGATGAGGAGGACCTGGCGGATGAAATGATATGCATCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR-3UTR CCA 90 bp GAAATGGCGCTCCCTGCGGCTGGTATTAGGTTACCATTGGCACCGAAGGAACCACCAGGCTCAACCGCTTaGGACCTGTTCCTACCAGGT +
Preference number: 2 (lower is better)
Translates to: EMALPAAGIRLPLAPKEPPGSTA*DLFLPG
Trigger: ACCTGGTAGGAACAGGTCCCAAGCGGTTGAGCCTGG...TGGTTCCTTCGGTGCCAATGGTAACCTAATACCAGCCGCAGGGAGCGCCATTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
3UTR-3UTR TCA 90 bp GAAAGTCCGGTAGGAGATGTCGGGCTCGTCTGTGTACCAGGAGCTGCGGTGCAGCTGGTAGCTGGGTTCTaGCTTACTTACACACCGTAT +
Preference number: 2 (lower is better)
Translates to: ESPVGDVGLVCVPGAAVQLVAGF*LTYTPY
Trigger: ATACGGTGTGTAAGTAAGTCAGAACCCAGCTACCAG...CTGCACCGCAGCTCCTGGTACACAGACGAGCCCGACATCTCCTACCGGACTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR-3UTR GCA 90 bp CCAAGGGGCAGAGCAGCCAGCTGGACCTGCTCTGTAATTCACTTACTTACTTACGTTGGGTGGGCCTGGTaGCCTGGTACATGGGAGAAG +
Preference number: 2 (lower is better)
Translates to: PRGRAASWTCSVIHLLTYVGWAW*PGTWEK
Trigger: CTTCTCCCATGTACCAGGGCACCAGGCCCACCCAAC...GTAAGTAAGTAAGTGAATTACAGAGCAGGTCCAGCTGGCTGCTCTGCCCCTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
3UTR-3UTR GCA 90 bp CGTATTTCAGAACAGCTAAACAGGAACCAGGACGCAGTGTATTTGGGGGAAAGGTGCACCCCGCCGCCATaGCTTCAGTTGGGTGGGCCT +
Preference number: 2 (lower is better)
Translates to: RISEQLNRNQDAVYLGERCTPPP*LQLGGP
Trigger: AGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCA...CCTTTCCCCCAAATACACTGCGTCCTGGTTCCTGTTTAGCTGTTCTGAAATACG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
3UTR-3UTR GCA 90 bp CCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCAGACCATTTTCAGACACATaGTCAAGGTTCCCAATGCTG +
Preference number: 2 (lower is better)
Translates to: PPCLQLGGPGALVHGRSRPFSDT*SRFPML
Trigger: CAGCATTGGGAACCTTGAGCATGTGTCTGAAAATGG...TCTGCTTCTCCCATGTACCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR-3UTR CCA 90 bp CACCAGTCCCCAGAGGACAAGAGCAGCTATATCTCATCCACCTATGCATTTCTGTGCCCATCTGGACAATaGGGCAGGGCAGGTCTGGCC +
Preference number: 2 (lower is better)
Translates to: HQSPEDKSSYISSTYAFLCPSGQ*GRAGLA
Trigger: GGCCAGACCTGCCCTGCCCCATTGTCCAGATGGGCA...CAGAAATGCATAGGTGGATGAGATATAGCTGCTCTTGTCCTCTGGGGACTGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
3UTR-3UTR CCA 90 bp AACCGTAACTATGGATACCCAAGGGGCAGAGCAGCCAGCTGGACCTGCTCTGTAGTCGGAGGCTCTCACTaGCAAATGACAGCTCTGTGC +
Preference number: 2 (lower is better)
Translates to: NRNYGYPRGRAASWTCSVVGGSH*QMTALC
Trigger: GCACAGAGCTGTCATTTGCCAGTGAGAGCCTCCGAC...TACAGAGCAGGTCCAGCTGGCTGCTCTGCCCCTTGGGTATCCATAGTTACGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
3UTR-3UTR CCA 90 bp GGTGATGCATATCATTTCATCCGCCAGGTCCTCCTCATCCCTCCCAGGGTCTGGCTGGGCCGCTTTCCATaGGCAGCTTTGGACATATTG +
Preference number: 2 (lower is better)
Translates to: GDAYHFIRQVLLIPPRVWLGRFP*AALDIL
Trigger: CAATATGTCCAAAGCTGCCCATGGAAAGCGGCCCAG...CCAGACCCTGGGAGGGATGAGGAGGACCTGGCGGATGAAATGATATGCATCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR-3UTR CCA 90 bp TTCTTAAGCAGCACCACCAGTCCCCAGAGGACAAGAGCAGCTATATCTCATCCAGGTGGGATGCTGGGGTaGGAGGTAGTAGGCGTCTCC +
Preference number: 2 (lower is better)
Translates to: FLSSTTSPQRTRAAISHPGGMLG*EVVGVS
Trigger: GGAGACGCCTACTACCTCCCACCCCAGCATCCCACC...TGGATGAGATATAGCTGCTCTTGTCCTCTGGGGACTGGTGGTGCTGCTTAAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR-3UTR TCA 90 bp CGACACTCCAATCCTATAGATCACCACGTTGCTCCTCTGTCCCCAGCACCCCTTCAGTTGCCCTTAGCGTaGCAGTCAGAAACCGACCAT +
Preference number: 2 (lower is better)
Translates to: RHSNPIDHHVAPLSPAPLQLPLA*QSETDH
Trigger: ATGGTCGGTTTCTGACTGTCACGCTAAGGGCAACTG...AAGGGGTGCTGGGGACAGAGGAGCAACGTGGTGATCTATAGGATTGGAGTGTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
3UTR-3UTR TCA 90 bp TTCTTAAGCAGCACCACCAGTCCCCAGAGGACAAGAGCAGCTATATCTCATCCACACGACCGGGTCGAGTaGCTCGGTGAGTACTTCTGG +
Preference number: 2 (lower is better)
Translates to: FLSSTTSPQRTRAAISHPHDRVE*LGEYFW
Trigger: CCAGAAGTACTCACCGAGTCACTCGACCCGGTCGTG...TGGATGAGATATAGCTGCTCTTGTCCTCTGGGGACTGGTGGTGCTGCTTAAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR-3UTR GCA 90 bp AGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTGGTTTATGAGGTCCCATTaGCCTCGCAATAATCACTGG +
Preference number: 2 (lower is better)
Translates to: RSRLHSSAHLDNGAGQVWFMRSH*PRNNHW
Trigger: CCAGTGATTATTGCGAGGGCAATGGGACCTCATAAA...CCAGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
3UTR-3UTR GCA 90 bp TCCTGTGGACACGTTAAGATGGAACCTGAGGTGTTGCCTGGATTGGTTTTGGCATCTCTGTGGGGCAGCTaGCCCCCTCCTTTGCTCTCT +
Preference number: 2 (lower is better)
Translates to: SCGHVKMEPEVLPGLVLASLWGS*PPPLLS
Trigger: AGAGAGCAAAGGAGGGGGGCAGCTGCCCCACAGAGA...TGCCAAAACCAATCCAGGCAACACCTCAGGTTCCATCTTAACGTGTCCACAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
3UTR-3UTR CCA 90 bp TTCTTAAGCAGCACCACCAGTCCCCAGAGGACAAGAGCAGCTATATCTCATCCAACAGCAGTGCCCATCTaGACAATGGGGCAGGGCAGG +
Preference number: 2 (lower is better)
Translates to: FLSSTTSPQRTRAAISHPTAVPI*TMGQGR
Trigger: CCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGT...TGGATGAGATATAGCTGCTCTTGTCCTCTGGGGACTGGTGGTGCTGCTTAAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
3UTR-3UTR CCA 90 bp AGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTGGCTCGGTGAGTACTTCTaGGCTTTACTTGAATCTAGG +
Preference number: 2 (lower is better)
Translates to: RSRLHSSAHLDNGAGQVWLGEYF*ALLESR
Trigger: CCTAGATTCAAGTAAAGCCCAGAAGTACTCACCGAG...CCAGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR-3UTR TCA 90 bp CCTGGTACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGAAAACCTTATTTATaGGGTCCCATTGCCCTCGCA +
Preference number: 2 (lower is better)
Translates to: PGTWEKQTPQQCPSGQWGRKPYL*GPIALA
Trigger: TGCGAGGGCAATGGGACCTCATAAATAAGGTTTTCT...GCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTACCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
3UTR-3UTR GCA 90 bp ACTGACTTTGGAAAAGATCATCGCCTCTATCAGACACTTAGGGTCCTGGTCTGGGTTGGGTGGGCCTGGTaGCCTGGTACATGGGAGAAG +
Preference number: 2 (lower is better)
Translates to: TDFGKDHRLYQTLRVLVWVGWAW*PGTWEK
Trigger: CTTCTCCCATGTACCAGGGCACCAGGCCCACCCAAC...CCAGACCAGGACCCTAAGTGTCTGATAGAGGCGATGATCTTTTCCAAAGTCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
3UTR-3UTR GCA 90 bp ACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCATTTATGAGGTCCCATTaGCCTCGCAATAATCACTGG +
Preference number: 2 (lower is better)
Translates to: TWEKQTPQQCPSGQWGRAFMRSH*PRNNHW
Trigger: CCAGTGATTATTGCGAGGGCAATGGGACCTCATAAA...TGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
3UTR-3UTR GCA 90 bp ACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCATATCTCATCCACCTATaGATTTCTGCACCAGCGATG +
Preference number: 2 (lower is better)
Translates to: TWEKQTPQQCPSGQWGRAYLIHL*ISAPAM
Trigger: CATCGCTGGTGCAGAAATGCATAGGTGGATGAGATA...TGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
3UTR-3UTR CCA 90 bp ACTGGCGTCACATCACAGAAAACCTTATTTATGAGGTCCCATTGCCCTCGCAATTGCCCATCTGGACAATaGGGCAGGGCAGGTCTGGCC +
Preference number: 2 (lower is better)
Translates to: TGVTSQKTLFMRSHCPRNCPSGQ*GRAGLA
Trigger: GGCCAGACCTGCCCTGCCCCATTGTCCAGATGGGCA...ATTGCGAGGGCAATGGGACCTCATAAATAAGGTTTTCTGTGATGTGACGCCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
3UTR-3UTR CCA 90 bp CGTATTTCAGAACAGCTAAACAGGAACCAGGACGCAGTGTATTTGGGGGAAAGGACAGCAGTGCCCATCTaGACAATGGGGCAGGGCAGG +
Preference number: 2 (lower is better)
Translates to: RISEQLNRNQDAVYLGERTAVPI*TMGQGR
Trigger: CCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGT...CCTTTCCCCCAAATACACTGCGTCCTGGTTCCTGTTTAGCTGTTCTGAAATACG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
3UTR-3UTR CCA 90 bp AACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGTATCTAAGTTTACCTaGTTGCGAGTGCATTATTAT +
Preference number: 2 (lower is better)
Translates to: NFPLHPAAMPSVGWAWCPVSKFT*LRVHYY
Trigger: ATAATAATGCACTCGCAACCAGGTAAACTTAGATAC...AGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
3UTR-3UTR CCA 90 bp GGAGGTCATGGCGGACTGGCATACAAAAGGAACTCTGTCAGCTCAGCGCCGAGGTGCAGGACTTTGGAATaGAGTCAGATACCCACCTTA +
Preference number: 2 (lower is better)
Translates to: GGHGGLAYKRNSVSSAPRCRTLE*SQIPTL
Trigger: TAAGGTGGGTATCTGACTCCATTCCAAAGTCCTGCA...CCTCGGCGCTGAGCTGACAGAGTTCCTTTTGTATGCCAGTCCGCCATGACCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
3UTR-3UTR CCA 90 bp CCTGGTACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCATAGCCATGTATCTCTaGGTCTTCCCGGCAAATAGT +
Preference number: 2 (lower is better)
Translates to: PGTWEKQTPQQCPSGQWGIAMYL*VFPANS
Trigger: ACTATTTGCCGGGAAGACCCAGAGATACATGGCTAT...GCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTACCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR-3UTR CCA 90 bp AGACAGTTGCAACCCATGGTGGATCCAAAGGTACAGTATCAAAATCATGGAACTGACGGGACCTCTTCCTaGCTGCTCTGCCGGCGCAGG +
Preference number: 2 (lower is better)
Translates to: RQLQPMVDPKVQYQNHGTDGTSS*LLCRRR
Trigger: CCTGCGCCGGCAGAGCAGCCAGGAAGAGGTCCCGTC...AGTTCCATGATTTTGATACTGTACCTTTGGATCCACCATGGGTTGCAACTGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR-3UTR TCA 90 bp CCTGGTACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCTTCGTGTTTTGTTGCTaGCACAAATTTTGGGTCCCT +
Preference number: 2 (lower is better)
Translates to: PGTWEKQTPQQCPSGQWGFVFCC*HKFWVP
Trigger: AGGGACCCAAAATTTGTGTCAGCAACAAAACACGAA...GCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTACCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR-3UTR GCA 90 bp TATCCAAAAGTGGGTTTTCATCAGGACGTACAGTCAGAGTGTGAGTGCATTCTATGCACCCCGCCGCCATaGCTTCAGTTGGGTGGGCCT +
Preference number: 2 (lower is better)
Translates to: YPKVGFHQDVQSECECILCTPPP*LQLGGP
Trigger: AGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCA...TAGAATGCACTCACACTCTGACTGTACGTCCTGATGAAAACCCACTTTTGGATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
3UTR-3UTR GCA 90 bp CGACACTCCAATCCTATAGATCACCACGTTGCTCCTCTGTCCCCAGCACCCCTTGCAGCCAGCTGGACCTaGTCTGTAATTCACTTACTT +
Preference number: 2 (lower is better)
Translates to: RHSNPIDHHVAPLSPAPLAASWT*SVIHLL
Trigger: AAGTAAGTGAATTACAGAGCAGGTCCAGCTGGCTGC...AAGGGGTGCTGGGGACAGAGGAGCAACGTGGTGATCTATAGGATTGGAGTGTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
3UTR-3UTR GCA 90 bp TTTCCTGTGGACACGTTAAGATGGAACCTGAGGTGTTGCCTGGATTGGTTTTGGTCCGGAGGAGTGCTTTaGTTGGAAGGGGTCTCCCTG +
Preference number: 2 (lower is better)
Translates to: FPVDTLRWNLRCCLDWFWSGGVL*LEGVSL
Trigger: CAGGGAGACCCCTTCCAAGCAAAGCACTCCTCCGGA...CCAAAACCAATCCAGGCAACACCTCAGGTTCCATCTTAACGTGTCCACAGGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
3UTR-3UTR CCA 90 bp ACTGGCGTCACATCACAGAAAACCTTATTTATGAGGTCCCATTGCCCTCGCAATGCTGTTTCCTGCAGCTaGGGCCGAGCGCATGGTACT +
Preference number: 2 (lower is better)
Translates to: TGVTSQKTLFMRSHCPRNAVSCS*GRAHGT
Trigger: AGTACCATGCGCTCGGCCCCAGCTGCAGGAAACAGC...ATTGCGAGGGCAATGGGACCTCATAAATAAGGTTTTCTGTGATGTGACGCCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
3UTR-3UTR CCA 90 bp GACAGTTGCAACCCATGGTGGATCCAAAGGTACAGTATCAAAATCATGGAACTCTGCCCATCTGGACAATaGGGCAGGGCAGGTCTGGCC +
Preference number: 2 (lower is better)
Translates to: DSCNPWWIQRYSIKIMELCPSGQ*GRAGLA
Trigger: GGCCAGACCTGCCCTGCCCCATTGTCCAGATGGGCA...GAGTTCCATGATTTTGATACTGTACCTTTGGATCCACCATGGGTTGCAACTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
3UTR-3UTR CCA 90 bp AGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTGGATAATCACTGGTAGCTaGGTTCTGACTTACTTACAC +
Preference number: 2 (lower is better)
Translates to: RSRLHSSAHLDNGAGQVWIITGS*VLTYLH
Trigger: GTGTAAGTAAGTCAGAACCCAGCTACCAGTGATTAT...CCAGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
3UTR-3UTR CCA 90 bp TTCTTAAGCAGCACCACCAGTCCCCAGAGGACAAGAGCAGCTATATCTCATCCAGGCAGAGCAGCCAGCTaGACCTGCTCTGTAATTCAC +
Preference number: 2 (lower is better)
Translates to: FLSSTTSPQRTRAAISHPGRAAS*TCSVIH
Trigger: GTGAATTACAGAGCAGGTCCAGCTGGCTGCTCTGCC...TGGATGAGATATAGCTGCTCTTGTCCTCTGGGGACTGGTGGTGCTGCTTAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
3UTR-3UTR CCA 90 bp CAGGACTTTGGAATGGAGTCAGATACCCACCTTAGGCAGGTCTGCTTAATCTTTGAGGAGTGCTTTGCTTaGAAGGGGTCTCCCTGGGGC +
Preference number: 2 (lower is better)
Translates to: QDFGMESDTHLRQVCLIFEECFA*KGSPWG
Trigger: GCCCCAGGGAGACCCCTTCCAAGCAAAGCACTCCTC...AAAGATTAAGCAGACCTGCCTAAGGTGGGTATCTGACTCCATTCCAAAGTCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
3UTR-3UTR CCA 90 bp GGTTCCCTGACTCCCAGTGTCCTTGAAACTAGACCACACTGCTTCCAAAGAGGCAGGTGTTGCCTGGATTaGTTTTGGCATGCGGGTGTA +
Preference number: 2 (lower is better)
Translates to: GSLTPSVLETRPHCFQRGRCCLD*FWHAGV
Trigger: TACACCCGCATGCCAAAACCAATCCAGGCAACACCT...GCCTCTTTGGAAGCAGTGTGGTCTAGTTTCAAGGACACTGGGAGTCAGGGAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000645528.2
3UTR-3UTR TCA 90 bp CCTGGTACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCGGTTTATGGCTTTCTTaGGGCATGACATCTCTTATA +
Preference number: 2 (lower is better)
Translates to: PGTWEKQTPQQCPSGQWGGLWLS*GMTSLI
Trigger: TATAAGAGATGTCATGCCTCAAGAAAGCCATAAACC...GCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTACCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
3UTR-3UTR GCA 90 bp GACAGTTGCAACCCATGGTGGATCCAAAGGTACAGTATCAAAATCATGGAACTCGAGCGCATGGTACTCTaGCAGGCTCAACCGCTTGGG +
Preference number: 2 (lower is better)
Translates to: DSCNPWWIQRYSIKIMELERMVL*QAQPLG
Trigger: CCCAAGCGGTTGAGCCTGGCAGAGTACCATGCGCTC...GAGTTCCATGATTTTGATACTGTACCTTTGGATCCACCATGGGTTGCAACTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
3UTR-3UTR GCA 90 bp TGCAACCCATGGTGGATCCAAAGGTACAGTATCAAAATCATGGAACTCTTGCCCCAGACTCCACAGCAGTaGCCATCTGGACAATGGGGC +
Preference number: 2 (lower is better)
Translates to: CNPWWIQRYSIKIMELLPQTPQQ*PSGQWG
Trigger: GCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTG...GGGCAAGAGTTCCATGATTTTGATACTGTACCTTTGGATCCACCATGGGTTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
3UTR-3UTR GCA 90 bp AGGAACCAGGAGGATAAGAATATCCATAATTTCAGAGCTGCCCTGGCACAGTACCCTTTAACTTTCCCCTaGACCCCGCCGCCATGCCTT +
Preference number: 2 (lower is better)
Translates to: RNQEDKNIHNFRAALAQYPLTFP*TPPPCL
Trigger: AAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGG...GTACTGTGCCAGGGCAGCTCTGAAATTATGGATATTCTTATCCTCCTGGTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
3UTR-3UTR GCA 90 bp CGACACTCCAATCCTATAGATCACCACGTTGCTCCTCTGTCCCCAGCACCCCTTTTTATGAGGTCCCATTaGCCTCGCAATAATCACTGG +
Preference number: 2 (lower is better)
Translates to: RHSNPIDHHVAPLSPAPLFMRSH*PRNNHW
Trigger: CCAGTGATTATTGCGAGGGCAATGGGACCTCATAAA...AAGGGGTGCTGGGGACAGAGGAGCAACGTGGTGATCTATAGGATTGGAGTGTCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
3UTR-3UTR GCA 90 bp CAGACACTTAGGGTCCTGGTCTGGCAATTTTGGCCTGATGTGATGCCACAAGACATTGCAGGGAATCCCTaGCAAGGTAACCTGACAGTC +
Preference number: 2 (lower is better)
Translates to: QTLRVLVWQFWPDVMPQDIAGNP*QGNLTV
Trigger: GACTGTCAGGTTACCTTGGCAGGGATTCCCTGCAAT...GTCTTGTGGCATCACATCAGGCCAAAATTGCCAGACCAGGACCCTAAGTGTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
3UTR-3UTR GCA 90 bp TTTCCTGTGGACACGTTAAGATGGAACCTGAGGTGTTGCCTGGATTGGTTTTGGCACCTTCCGGAGGAGTaGTTTGCTTGGAAGGGGTCT +
Preference number: 2 (lower is better)
Translates to: FPVDTLRWNLRCCLDWFWHLPEE*FAWKGS
Trigger: AGACCCCTTCCAAGCAAAGCACTCCTCCGGAAGGTG...CCAAAACCAATCCAGGCAACACCTCAGGTTCCATCTTAACGTGTCCACAGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
3UTR-3UTR GCA 90 bp GTGTCTTGGGCTCAGCATCAGATGTACAGACTCCAACCACCACTTGGAATCAGCGAAACTAGACCACACTaGTTCCAAAGAGGCATCCCC +
Preference number: 2 (lower is better)
Translates to: VSWAQHQMYRLQPPLGISETRPH*FQRGIP
Trigger: GGGGATGCCTCTTTGGAAGCAGTGTGGTCTAGTTTC...GCTGATTCCAAGTGGTGGTTGGAGTCTGTACATCTGATGCTGAGCCCAAGACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636938.1
3UTR-3UTR GCA 90 bp ACTTACTTACTTACCAGAGGGTGGTTCAAGTCAAACAAACAAAACCAAAGACAGGCAGGGACGGCAGGCTaGCGTTCACCTGGTCCAGGG +
Preference number: 2 (lower is better)
Translates to: TYLLTRGWFKSNKQNQRQAGTAG*RSPGPG
Trigger: CCCTGGACCAGGTGAACGGCAGCCTGCCGTCCCTGC...CTGTCTTTGGTTTTGTTTGTTTGACTTGAACCACCCTCTGGTAAGTAAGTAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR-3UTR CCA 90 bp CCTGGTACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCATAATCACTGGTAGCTaGGTTCTGACTTACTTACAC +
Preference number: 2 (lower is better)
Translates to: PGTWEKQTPQQCPSGQWGIITGS*VLTYLH
Trigger: GTGTAAGTAAGTCAGAACCCAGCTACCAGTGATTAT...GCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTACCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
3UTR-3UTR CCA 90 bp TTTCCTGTGGACACGTTAAGATGGAACCTGAGGTGTTGCCTGGATTGGTTTTGGGGGCCTGTCAGTCTTTaGGAGTTCGGGCAAACTAGG +
Preference number: 2 (lower is better)
Translates to: FPVDTLRWNLRCCLDWFWGPVSL*EFGQTR
Trigger: CCTAGTTTGCCCGAACTCCCAAAGACTGACAGGCCC...CCAAAACCAATCCAGGCAACACCTCAGGTTCCATCTTAACGTGTCCACAGGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
3UTR-3UTR CCA 90 bp GTGTTTCCTGTGGACACGTTAAGATGGAACCTGAGGTGTTGCCTGGATTGGTTTGGGCCTGTCAGTCTTTaGGAGTTCGGGCAAACTAGG +
Preference number: 2 (lower is better)
Translates to: VFPVDTLRWNLRCCLDWFGPVSL*EFGQTR
Trigger: CCTAGTTTGCCCGAACTCCCAAAGACTGACAGGCCC...AAACCAATCCAGGCAACACCTCAGGTTCCATCTTAACGTGTCCACAGGAAACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
3UTR CAA 90 bp CATCAGCGATTTCGTGTTTTGTTGCTGACACAAATTTTGGGTCCCTaGCATAGCGTCCCAAGCCTTCGGATATCAGGACTGCCTCCACCA +
Preference number: 2 (lower is better)
Translates to: HQRFRVLLLTQILGP*HSVPSLRISGLPPP
Trigger: TGGTGGAGGCAGTCCTGATATCCGAAGGCTTGGGACGCTATGCAAGGGACCCAAAATTTGTGTCAGCAACAAAACACGAAATCGCTGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR CAA 90 bp GGTCACAGGCATCAGCGATTTCGTGTTTTGTTGCTGACACAAATTTaGGGTCCCTTGCATAGCGTCCCAAGCCTTCGGATATCAGGACTG +
Preference number: 2 (lower is better)
Translates to: GHRHQRFRVLLLTQI*GPLHSVPSLRISGL
Trigger: CAGTCCTGATATCCGAAGGCTTGGGACGCTATGCAAGGGACCCAAAATTTGTGTCAGCAACAAAACACGAAATCGCTGATGCCTGTGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR-3UTR TCA 90 bp AGGAACCAGGAGGATAAGAATATCCATAATTTCAGAGCTGCCCTGGCACAGTACGTTGGGCCCAGTGACTaGTATGCTAGACCGATGGCT +
Preference number: 2 (lower is better)
Translates to: RNQEDKNIHNFRAALAQYVGPSD*YARPMA
Trigger: AGCCATCGGTCTAGCATATCAGTCACTGGGCCCAAC...GTACTGTGCCAGGGCAGCTCTGAAATTATGGATATTCTTATCCTCCTGGTTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
3UTR-3UTR TCA 90 bp ACTGGCGTCACATCACAGAAAACCTTATTTATGAGGTCCCATTGCCCTCGCAATGTTGGGCCCAGTGACTaGTATGCTAGACCGATGGCT +
Preference number: 2 (lower is better)
Translates to: TGVTSQKTLFMRSHCPRNVGPSD*YARPMA
Trigger: AGCCATCGGTCTAGCATATCAGTCACTGGGCCCAAC...ATTGCGAGGGCAATGGGACCTCATAAATAAGGTTTTCTGTGATGTGACGCCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
3UTR-3UTR TCA 90 bp ATACCCAAGGGGCAGAGCAGCCAGCTGGACCTGCTCTGTAATTCACTTACTTACCTGGTAGCTGGGTTCTaGCTTACTTACACACCGTAT +
Preference number: 2 (lower is better)
Translates to: IPKGQSSQLDLLCNSLTYLVAGF*LTYTPY
Trigger: ATACGGTGTGTAAGTAAGTCAGAACCCAGCTACCAG...GTAAGTAAGTGAATTACAGAGCAGGTCCAGCTGGCTGCTCTGCCCCTTGGGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
3UTR-3UTR TCA 90 bp GGAGGTCATGGCGGACTGGCATACAAAAGGAACTCTGTCAGCTCAGCGCCGAGGTTCCTGCATTTCTTCTaGAATGCTGTTTCAGTAGAA +
Preference number: 2 (lower is better)
Translates to: GGHGGLAYKRNSVSSAPRFLHFF*NAVSVE
Trigger: TTCTACTGAAACAGCATTTCAGAAGAAATGCAGGAA...CCTCGGCGCTGAGCTGACAGAGTTCCTTTTGTATGCCAGTCCGCCATGACCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
3UTR-3UTR TCA 90 bp GACAGTTGCAACCCATGGTGGATCCAAAGGTACAGTATCAAAATCATGGAACTCCCATCTCGTCGATGGTaGGGTCACAGGCATCAGCGA +
Preference number: 2 (lower is better)
Translates to: DSCNPWWIQRYSIKIMELPSRRW*GHRHQR
Trigger: TCGCTGATGCCTGTGACCTCACCATCGACGAGATGG...GAGTTCCATGATTTTGATACTGTACCTTTGGATCCACCATGGGTTGCAACTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR-3UTR GCA 90 bp GTGTCTTGGGCTCAGCATCAGATGTACAGACTCCAACCACCACTTGGAATCAGCTGGAACCTGAGGTGTTaGCTGGATTGGTTTTGGCAT +
Preference number: 2 (lower is better)
Translates to: VSWAQHQMYRLQPPLGISWNLRC*LDWFWH
Trigger: ATGCCAAAACCAATCCAGGCAACACCTCAGGTTCCA...GCTGATTCCAAGTGGTGGTTGGAGTCTGTACATCTGATGCTGAGCCCAAGACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636938.1
3UTR-3UTR GCA 90 bp AGTGGGGAACTACAATTATTAGGACCCATGGATATTGCTGCAGTTCAAATACAAAGGCCAGAGCCAGTCTaGCCCTCGCTGGGGGCTACA +
Preference number: 2 (lower is better)
Translates to: SGELQLLGPMDIAAVQIQRPEPV*PSLGAT
Trigger: TGTAGCCCCCAGCGAGGGGCAGACTGGCTCTGGCCT...TTGTATTTGAACTGCAGCAATATCCATGGGTCCTAATAATTGTAGTTCCCCACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR-3UTR CCA 90 bp TGCAACCCATGGTGGATCCAAAGGTACAGTATCAAAATCATGGAACTCTTGCCCTGGTGCCCTGGTACATaGGAGAAGCAGACTCCACAG +
Preference number: 2 (lower is better)
Translates to: CNPWWIQRYSIKIMELLPWCPGT*EKQTPQ
Trigger: CTGTGGAGTCTGCTTCTCCCATGTACCAGGGCACCA...GGGCAAGAGTTCCATGATTTTGATACTGTACCTTTGGATCCACCATGGGTTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
3UTR-3UTR CCA 90 bp AGACAGTTGCAACCCATGGTGGATCCAAAGGTACAGTATCAAAATCATGGAACTTCAGTTGGGTGGGCCTaGTGCCCTGGTACATGGGAG +
Preference number: 2 (lower is better)
Translates to: RQLQPMVDPKVQYQNHGTSVGWA*CPGTWE
Trigger: CTCCCATGTACCAGGGCACCAGGCCCACCCAACTGA...AGTTCCATGATTTTGATACTGTACCTTTGGATCCACCATGGGTTGCAACTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
3UTR-3UTR CCA 90 bp ATGTCAGGAAAGAGTCATTTACAAACCTTGAAGTGTTTTTGCCTGGATCAGAGTCGCCATGCCTTCAGTTaGGTGGGCCTGGTGCCCTGG +
Preference number: 2 (lower is better)
Translates to: MSGKSHLQTLKCFCLDQSRHAFS*VGLVPW
Trigger: CCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCG...ACTCTGATCCAGGCAAAAACACTTCAAGGTTTGTAAATGACTCTTTCCTGACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
3UTR CAA 90 bp GGGTGTCTTGGGCTCAGCATCAGATGTACAGACTCCAACCACCACTaGGAATCAGCTGAGAATTCAAGATCAGACACCCTTATCGACCAA +
Preference number: 2 (lower is better)
Translates to: GCLGLSIRCTDSNHH*ESAENSRSDTLIDQ
Trigger: TTGGTCGATAAGGGTGTCTGATCTTGAATTCTCAGCTGATTCCAAGTGGTGGTTGGAGTCTGTACATCTGATGCTGAGCCCAAGACACCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636938.1
3UTR CAA 90 bp ACATGCTCAAGGTTCCCAATGCTGGGCCGCTTTCCATGGGCAGCTTaGGACATATTGGCATTATTGAGATTGGCATTTGTTGAGGTGGGA +
Preference number: 2 (lower is better)
Translates to: TCSRFPMLGRFPWAA*DILALLRLAFVEVG
Trigger: TCCCACCTCAACAAATGCCAATCTCAATAATGCCAATATGTCCAAAGCTGCCCATGGAAAGCGGCCCAGCATTGGGAACCTTGAGCATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR-3UTR TCA 90 bp TGTAATTCACTTACTTACTTACCAGAGGGTGGTTCAAGTCAAACAAACAAAACCCTCACCCATCCTCTGTaGGAGGGCGGGGCCTGCTGT +
Preference number: 2 (lower is better)
Translates to: CNSLTYLPEGGSSQTNKTLTHPL*EGGACC
Trigger: ACAGCAGGCCCCGCCCTCTCACAGAGGATGGGTGAG...GGTTTTGTTTGTTTGACTTGAACCACCCTCTGGTAAGTAAGTAAGTGAATTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
3UTR-3UTR TCA 90 bp TGCAACCCATGGTGGATCCAAAGGTACAGTATCAAAATCATGGAACTCTTGCCCAGCAGTGGGGGTCCCTaGAATAGCCATGTATCTCTG +
Preference number: 2 (lower is better)
Translates to: CNPWWIQRYSIKIMELLPSSGGP*NSHVSL
Trigger: CAGAGATACATGGCTATTTCAGGGACCCCCACTGCT...GGGCAAGAGTTCCATGATTTTGATACTGTACCTTTGGATCCACCATGGGTTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR-3UTR GCA 90 bp ATTCAAGATCAGACACCCTTATCGACCAACATCTTGGGCAAAAATCTGCTATTCTCTCTGTGGGGCAGCTaGCCCCCTCCTTTGCTCTCT +
Preference number: 2 (lower is better)
Translates to: IQDQTPLSTNILGKNLLFSLWGS*PPPLLS
Trigger: AGAGAGCAAAGGAGGGGGGCAGCTGCCCCACAGAGA...GAATAGCAGATTTTTGCCCAAGATGTTGGTCGATAAGGGTGTCTGATCTTGAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000636938.1
3UTR-3UTR CCA 90 bp AGACAGTTGCAACCCATGGTGGATCCAAAGGTACAGTATCAAAATCATGGAACTCCAGGCTCAACCGCTTaGGACCTGTTCCTACCAGGT +
Preference number: 2 (lower is better)
Translates to: RQLQPMVDPKVQYQNHGTPGSTA*DLFLPG
Trigger: ACCTGGTAGGAACAGGTCCCAAGCGGTTGAGCCTGG...AGTTCCATGATTTTGATACTGTACCTTTGGATCCACCATGGGTTGCAACTGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
3UTR CAA 90 bp AGGTTCCCAATGCTGGGCCGCTTTCCATGGGCAGCTTTGGACATATaGGCATTATTGAGATTGGCATTTGTTGAGGTGGGAACTTGCTTT +
Preference number: 2 (lower is better)
Translates to: RFPMLGRFPWAALDI*ALLRLAFVEVGTCF
Trigger: AAAGCAAGTTCCCACCTCAACAAATGCCAATCTCAATAATGCCAATATGTCCAAAGCTGCCCATGGAAAGCGGCCCAGCATTGGGAACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR-3UTR GCA 90 bp CCAAGGGGCAGAGCAGCCAGCTGGACCTGCTCTGTAATTCACTTACTTACTTACAAAACCAAAGACAGTTaGAACCCATGGTGGATCCAA +
Preference number: 2 (lower is better)
Translates to: PRGRAASWTCSVIHLLTYKTKDS*NPWWIQ
Trigger: TTGGATCCACCATGGGTTGCAACTGTCTTTGGTTTT...GTAAGTAAGTAAGTGAATTACAGAGCAGGTCCAGCTGGCTGCTCTGCCCCTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
3UTR-3UTR GCA 90 bp ATACCCAAGGGGCAGAGCAGCCAGCTGGACCTGCTCTGTAATTCACTTACTTACATCTATCTTTTTGATTaGAGGGAATCCCTGCCAAGG +
Preference number: 2 (lower is better)
Translates to: IPKGQSSQLDLLCNSLTYIYLFD*RESLPR
Trigger: CCTTGGCAGGGATTCCCTGCAATCAAAAAGATAGAT...GTAAGTAAGTGAATTACAGAGCAGGTCCAGCTGGCTGCTCTGCCCCTTGGGTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
3UTR-3UTR CCA 90 bp AAACCGACCATCGGAGTGATATTCTCTTATGTAAACTGGCGTCACATCACAGAATGGTGCCCTGGTACATaGGAGAAGCAGACTCCACAG +
Preference number: 2 (lower is better)
Translates to: KPTIGVIFSYVNWRHITEWCPGT*EKQTPQ
Trigger: CTGTGGAGTCTGCTTCTCCCATGTACCAGGGCACCA...TTCTGTGATGTGACGCCAGTTTACATAAGAGAATATCACTCCGATGGTCGGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
3UTR-3UTR CCA 90 bp CTTAAGCAGCACCACCAGTCCCCAGAGGACAAGAGCAGCTATATCTCATCCACCAGGACGCAGTGTATTTaGGGGAAAGGGTTTAAAAAT +
Preference number: 2 (lower is better)
Translates to: LKQHHQSPEDKSSYISSTRTQCI*GKGFKN
Trigger: ATTTTTAAACCCTTTCCCCCAAATACACTGCGTCCT...GGTGGATGAGATATAGCTGCTCTTGTCCTCTGGGGACTGGTGGTGCTGCTTAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
3UTR CAA 90 bp GCAGGGAATCCCTGCCAAGGTAACCTGACAGTCGGCCTAATTCTGTaGACAGAAAATGAAGCCTTGACGGTTCTAATTATCCAAAAGTGG +
Preference number: 2 (lower is better)
Translates to: AGNPCQGNLTVGLIL*TENEALTVLIIQKW
Trigger: CCACTTTTGGATAATTAGAACCGTCAAGGCTTCATTTTCTGTCAACAGAATTAGGCCGACTGTCAGGTTACCTTGGCAGGGATTCCCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
3UTR-3UTR TCA 90 bp CCAAGGGGCAGAGCAGCCAGCTGGACCTGCTCTGTAATTCACTTACTTACTTACGGTTTATGGCTTTCTTaGGGCATGACATCTCTTATA +
Preference number: 2 (lower is better)
Translates to: PRGRAASWTCSVIHLLTYGLWLS*GMTSLI
Trigger: TATAAGAGATGTCATGCCTCAAGAAAGCCATAAACC...GTAAGTAAGTAAGTGAATTACAGAGCAGGTCCAGCTGGCTGCTCTGCCCCTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
3UTR-3UTR TCA 90 bp AGACAGTTGCAACCCATGGTGGATCCAAAGGTACAGTATCAAAATCATGGAACTCTGGCAATTTTGGCCTaGTGTGATGCCACAAGACCC +
Preference number: 2 (lower is better)
Translates to: RQLQPMVDPKVQYQNHGTLAILA*CDATRP
Trigger: GGGTCTTGTGGCATCACATCAGGCCAAAATTGCCAG...AGTTCCATGATTTTGATACTGTACCTTTGGATCCACCATGGGTTGCAACTGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
3UTR-3UTR TCA 90 bp GGTTCCCTGACTCCCAGTGTCCTTGAAACTAGACCACACTGCTTCCAAAGAGGCTTCCTGCATTTCTTCTaGAATGCTGTTTCAGTAGAA +
Preference number: 2 (lower is better)
Translates to: GSLTPSVLETRPHCFQRGFLHFF*NAVSVE
Trigger: TTCTACTGAAACAGCATTTCAGAAGAAATGCAGGAA...GCCTCTTTGGAAGCAGTGTGGTCTAGTTTCAAGGACACTGGGAGTCAGGGAACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000645528.2
3UTR-3UTR GCA 90 bp CTTAAGCAGCACCACCAGTCCCCAGAGGACAAGAGCAGCTATATCTCATCCACCCTAAGTTTACCTGGTTaGGAGTGCATTATTATTCCA +
Preference number: 2 (lower is better)
Translates to: LKQHHQSPEDKSSYISSTLSLPG*ECIIIP
Trigger: TGGAATAATAATGCACTCGCAACCAGGTAAACTTAG...GGTGGATGAGATATAGCTGCTCTTGTCCTCTGGGGACTGGTGGTGCTGCTTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
3UTR-3UTR GCA 90 bp CTTAAGCAGCACCACCAGTCCCCAGAGGACAAGAGCAGCTATATCTCATCCACCACCCATGGATATTGCTaGAGTTCAAATACAATACAG +
Preference number: 2 (lower is better)
Translates to: LKQHHQSPEDKSSYISSTTHGYC*SSNTIQ
Trigger: CTGTATTGTATTTGAACTGCAGCAATATCCATGGGT...GGTGGATGAGATATAGCTGCTCTTGTCCTCTGGGGACTGGTGGTGCTGCTTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
3UTR-3UTR GCA 90 bp TTTGGGTGTGGTGGTGTTTCCTGTGGACACGTTAAGATGGAACCTGAGGTGTTGCTTTCTCTGAGTCTCTaGTTGGAAGGGAAAACTGTT +
Preference number: 2 (lower is better)
Translates to: FGCGGVSCGHVKMEPEVLLSLSL*LEGKTV
Trigger: AACAGTTTTCCCTTCCAAGCAGAGACTCAGAGAAAG...CAACACCTCAGGTTCCATCTTAACGTGTCCACAGGAAACACCACCACACCCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000645528.2
3UTR-3UTR GCA 90 bp ATCATGGAACTCTTGCCCAAAGAAAAGACTGCAAATAGTCATCTGGTATATCTTTCTTCCTGGCTGCTCTaGCGGCGCAGGCACTCAAAG +
Preference number: 2 (lower is better)
Translates to: IMELLPKEKTANSHLVYLSSWLL*RRRHSK
Trigger: CTTTGAGTGCCTGCGCCGGCAGAGCAGCCAGGAAGA...AAGATATACCAGATGACTATTTGCAGTCTTTTCTTTGGGCAAGAGTTCCATGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR-3UTR CCA 90 bp ATGTCAGGAAAGAGTCATTTACAAACCTTGAAGTGTTTTTGCCTGGATCAGAGTATGCCTTCAGTTGGGTaGGCCTGGTGCCCTGGTACA +
Preference number: 2 (lower is better)
Translates to: MSGKSHLQTLKCFCLDQSMPSVG*AWCPGT
Trigger: TGTACCAGGGCACCAGGCCCACCCAACTGAAGGCAT...ACTCTGATCCAGGCAAAAACACTTCAAGGTTTGTAAATGACTCTTTCCTGACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
3UTR-3UTR CCA 90 bp TACGTTCAAAGTGCTTTACAATCACTTAGCTATTCCTCACAACAGCCCTGTGAGACGCTCAGGAGGTCATaGCGGACTGGCATACAAAAG +
Preference number: 2 (lower is better)
Translates to: YVQSALQSLSYSSQQPCETLRRS*RTGIQK
Trigger: CTTTTGTATGCCAGTCCGCCATGACCTCCTGAGCGT...CTCACAGGGCTGTTGTGAGGAATAGCTAAGTGATTGTAAAGCACTTTGAACGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000645528.2
3UTR-3UTR CCA 90 bp TGTAATTCACTTACTTACTTACCAGAGGGTGGTTCAAGTCAAACAAACAAAACCTGTTCCGGAAGCTGCTaGGGACAGTCAGGCTGGCTG +
Preference number: 2 (lower is better)
Translates to: CNSLTYLPEGGSSQTNKTCSGSC*GQSGWL
Trigger: CAGCCAGCCTGACTGTCCCCAGCAGCTTCCGGAACA...GGTTTTGTTTGTTTGACTTGAACCACCCTCTGGTAAGTAAGTAAGTGAATTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR-3UTR TCA 90 bp GACAGTTGCAACCCATGGTGGATCCAAAGGTACAGTATCAAAATCATGGAACTCCTGGTAGCTGGGTTCTaGCTTACTTACACACCGTAT +
Preference number: 2 (lower is better)
Translates to: DSCNPWWIQRYSIKIMELLVAGF*LTYTPY
Trigger: ATACGGTGTGTAAGTAAGTCAGAACCCAGCTACCAG...GAGTTCCATGATTTTGATACTGTACCTTTGGATCCACCATGGGTTGCAACTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
3UTR-3UTR TCA 90 bp ACTGACTTTGGAAAAGATCATCGCCTCTATCAGACACTTAGGGTCCTGGTCTGGCGTACAGTCAGAGTGTaGGTGCATTCTAATGAAAAC +
Preference number: 2 (lower is better)
Translates to: TDFGKDHRLYQTLRVLVWRTVRV*VHSNEN
Trigger: GTTTTCATTAGAATGCACTCACACTCTGACTGTACG...CCAGACCAGGACCCTAAGTGTCTGATAGAGGCGATGATCTTTTCCAAAGTCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
3UTR-3UTR TCA 90 bp AGGTTTGGGTGTGGTGGTGTTTCCTGTGGACACGTTAAGATGGAACCTGAGGTGTTCCTGCATTTCTTCTaGAATGCTGTTTCAGTAGAA +
Preference number: 2 (lower is better)
Translates to: RFGCGGVSCGHVKMEPEVFLHFF*NAVSVE
Trigger: TTCTACTGAAACAGCATTTCAGAAGAAATGCAGGAA...CACCTCAGGTTCCATCTTAACGTGTCCACAGGAAACACCACCACACCCAAACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000645528.2
3UTR-3UTR TCA 90 bp TACGTTCAAAGTGCTTTACAATCACTTAGCTATTCCTCACAACAGCCCTGTGAGACAGATGGGGGAAACTaGGGCACAGAGAGGTTAAGT +
Preference number: 2 (lower is better)
Translates to: YVQSALQSLSYSSQQPCETDGGN*GTERLS
Trigger: ACTTAACCTCTCTGTGCCTCAGTTTCCCCCATCTGT...CTCACAGGGCTGTTGTGAGGAATAGCTAAGTGATTGTAAAGCACTTTGAACGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000645528.2
3UTR-3UTR GCA 90 bp ATACCCAAGGGGCAGAGCAGCCAGCTGGACCTGCTCTGTAATTCACTTACTTACCTAAGTTTACCTGGTTaGGAGTGCATTATTATTCCA +
Preference number: 2 (lower is better)
Translates to: IPKGQSSQLDLLCNSLTYLSLPG*ECIIIP
Trigger: TGGAATAATAATGCACTCGCAACCAGGTAAACTTAG...GTAAGTAAGTGAATTACAGAGCAGGTCCAGCTGGCTGCTCTGCCCCTTGGGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
3UTR-3UTR CCA 90 bp ACTTACTTACTTACCAGAGGGTGGTTCAAGTCAAACAAACAAAACCAAAGACAGTGGTGCCCTGGTACATaGGAGAAGCAGACTCCACAG +
Preference number: 2 (lower is better)
Translates to: TYLLTRGWFKSNKQNQRQWCPGT*EKQTPQ
Trigger: CTGTGGAGTCTGCTTCTCCCATGTACCAGGGCACCA...CTGTCTTTGGTTTTGTTTGTTTGACTTGAACCACCCTCTGGTAAGTAAGTAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
3UTR-3UTR CCA 90 bp TTAAGATGTGAAAATGCAACCTGCAGGGTTACCTCTGTTGACATCTTTGTGCATCACTGTATTCTGGACTaGGTCTCTGCAGAGAGCAGG +
Preference number: 2 (lower is better)
Translates to: LRCENATCRVTSVDIFVHHCILD*VSAESR
Trigger: CCTGCTCTCTGCAGAGACCCAGTCCAGAATACAGTG...ATGCACAAAGATGTCAACAGAGGTAACCCTGCAGGTTGCATTTTCACATCTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636938.1
3UTR-3UTR TCA 90 bp ATCATGGAACTCTTGCCCAAAGAAAAGACTGCAAATAGTCATCTGGTATATCTTGTTGGGCCCAGTGACTaGTATGCTAGACCGATGGCT +
Preference number: 2 (lower is better)
Translates to: IMELLPKEKTANSHLVYLVGPSD*YARPMA
Trigger: AGCCATCGGTCTAGCATATCAGTCACTGGGCCCAAC...AAGATATACCAGATGACTATTTGCAGTCTTTTCTTTGGGCAAGAGTTCCATGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
3UTR-3UTR TCA 90 bp ACTTACTTACTTACCAGAGGGTGGTTCAAGTCAAACAAACAAAACCAAAGACAGCAGTTGCCCTTAGCGTaGCAGTCAGAAACCGACCAT +
Preference number: 2 (lower is better)
Translates to: TYLLTRGWFKSNKQNQRQQLPLA*QSETDH
Trigger: ATGGTCGGTTTCTGACTGTCACGCTAAGGGCAACTG...CTGTCTTTGGTTTTGTTTGTTTGACTTGAACCACCCTCTGGTAAGTAAGTAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
3UTR-3UTR TCA 90 bp AGTGGGGAACTACAATTATTAGGACCCATGGATATTGCTGCAGTTCAAATACAAGGTCGAGTGACTCGGTaGGTACTTCTGGGCTTTACT +
Preference number: 2 (lower is better)
Translates to: SGELQLLGPMDIAAVQIQGRVTR*VLLGFT
Trigger: AGTAAAGCCCAGAAGTACTCACCGAGTCACTCGACC...TTGTATTTGAACTGCAGCAATATCCATGGGTCCTAATAATTGTAGTTCCCCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR-3UTR GCA 90 bp AACAAACTAGTGTATCTAAGTTTACCTGGTTGCGAGTGCATTATTATTCCAGTTCAGACTCCACAGCAGTaGCCATCTGGACAATGGGGC +
Preference number: 2 (lower is better)
Translates to: NKLVYLSLPGCECIIIPVQTPQQ*PSGQWG
Trigger: GCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTG...AACTGGAATAATAATGCACTCGCAACCAGGTAAACTTAGATACACTAGTTTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
3UTR-3UTR GCA 90 bp AGGAACCAGGAGGATAAGAATATCCATAATTTCAGAGCTGCCCTGGCACAGTACAAAACCAAAGACAGTTaGAACCCATGGTGGATCCAA +
Preference number: 2 (lower is better)
Translates to: RNQEDKNIHNFRAALAQYKTKDS*NPWWIQ
Trigger: TTGGATCCACCATGGGTTGCAACTGTCTTTGGTTTT...GTACTGTGCCAGGGCAGCTCTGAAATTATGGATATTCTTATCCTCCTGGTTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
3UTR-3UTR GCA 90 bp ACTGGCGTCACATCACAGAAAACCTTATTTATGAGGTCCCATTGCCCTCGCAATTTCTGCCTGGGTATCTaGTGTAGTAGCCATAGTTTT +
Preference number: 2 (lower is better)
Translates to: TGVTSQKTLFMRSHCPRNFCLGI*CSSHSF
Trigger: AAAACTATGGCTACTACAGCAGATACCCAGGCAGAA...ATTGCGAGGGCAATGGGACCTCATAAATAAGGTTTTCTGTGATGTGACGCCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR-3UTR CCA 90 bp ATACCCAAGGGGCAGAGCAGCCAGCTGGACCTGCTCTGTAATTCACTTACTTACCTGCAAATAGTCATCTaGTATATCTTGTGGAAAGAT +
Preference number: 2 (lower is better)
Translates to: IPKGQSSQLDLLCNSLTYLQIVI*YILWKD
Trigger: ATCTTTCCACAAGATATACCAGATGACTATTTGCAG...GTAAGTAAGTGAATTACAGAGCAGGTCCAGCTGGCTGCTCTGCCCCTTGGGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
3UTR-3UTR CCA 90 bp TCTAATTATCCAAAAGTGGGTTTTCATCAGGACGTACAGTCAGAGTGTGAGTGCGACAGTTGCAACCCATaGTGGATCCAAAGGTACAGT +
Preference number: 2 (lower is better)
Translates to: SNYPKVGFHQDVQSECECDSCNP*WIQRYS
Trigger: ACTGTACCTTTGGATCCACCATGGGTTGCAACTGTC...GCACTCACACTCTGACTGTACGTCCTGATGAAAACCCACTTTTGGATAATTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
3UTR-3UTR CCA 90 bp TACGTTCAAAGTGCTTTACAATCACTTAGCTATTCCTCACAACAGCCCTGTGAGCTTCTCACTGTATTCTaGACTGGGTCTCTGCAGAGA +
Preference number: 2 (lower is better)
Translates to: YVQSALQSLSYSSQQPCELLTVF*TGSLQR
Trigger: TCTCTGCAGAGACCCAGTCCAGAATACAGTGAGAAG...CTCACAGGGCTGTTGTGAGGAATAGCTAAGTGATTGTAAAGCACTTTGAACGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000645528.2
3UTR-3UTR CCA 90 bp ATCATGGAACTCTTGCCCAAAGAAAAGACTGCAAATAGTCATCTGGTATATCTTGACAGTCAGGCTGGCTaGTGTGAAAGTCCGGTAGGA +
Preference number: 2 (lower is better)
Translates to: IMELLPKEKTANSHLVYLDSQAG*CESPVG
Trigger: TCCTACCGGACTTTCACACCAGCCAGCCTGACTGTC...AAGATATACCAGATGACTATTTGCAGTCTTTTCTTTGGGCAAGAGTTCCATGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR-3UTR TCA 90 bp TATCCAAAAGTGGGTTTTCATCAGGACGTACAGTCAGAGTGTGAGTGCATTCTAAGAAAACCTTATTTATaGGGTCCCATTGCCCTCGCA +
Preference number: 2 (lower is better)
Translates to: YPKVGFHQDVQSECECILRKPYL*GPIALA
Trigger: TGCGAGGGCAATGGGACCTCATAAATAAGGTTTTCT...TAGAATGCACTCACACTCTGACTGTACGTCCTGATGAAAACCCACTTTTGGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
3UTR-3UTR TCA 90 bp AGGAACCAGGAGGATAAGAATATCCATAATTTCAGAGCTGCCCTGGCACAGTACGTCATTTACAAACCTTaGAGTGTTTTTGCCTGGATC +
Preference number: 2 (lower is better)
Translates to: RNQEDKNIHNFRAALAQYVIYKP*SVFAWI
Trigger: GATCCAGGCAAAAACACTTCAAGGTTTGTAAATGAC...GTACTGTGCCAGGGCAGCTCTGAAATTATGGATATTCTTATCCTCCTGGTTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
3UTR-3UTR TCA 90 bp ACTTACTTACTTACCAGAGGGTGGTTCAAGTCAAACAAACAAAACCAAAGACAGGGGGCTACAAGGTGGTaGTGCATATCATTTCATCCG +
Preference number: 2 (lower is better)
Translates to: TYLLTRGWFKSNKQNQRQGATRW*CISFHP
Trigger: CGGATGAAATGATATGCATCACCACCTTGTAGCCCC...CTGTCTTTGGTTTTGTTTGTTTGACTTGAACCACCCTCTGGTAAGTAAGTAAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR-3UTR GCA 90 bp TGCAACCCATGGTGGATCCAAAGGTACAGTATCAAAATCATGGAACTCTTGCCCTTACCTGGTTGCGAGTaGATTATTATTCCAGTTTAC +
Preference number: 2 (lower is better)
Translates to: CNPWWIQRYSIKIMELLPLPGCE*IIIPVY
Trigger: GTAAACTGGAATAATAATGCACTCGCAACCAGGTAA...GGGCAAGAGTTCCATGATTTTGATACTGTACCTTTGGATCCACCATGGGTTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
3UTR-3UTR GCA 90 bp TGCAACCCATGGTGGATCCAAAGGTACAGTATCAAAATCATGGAACTCTTGCCCAGGACCCATGGATATTaGTGCAGTTCAAATACAATA +
Preference number: 2 (lower is better)
Translates to: CNPWWIQRYSIKIMELLPRTHGY*CSSNTI
Trigger: TATTGTATTTGAACTGCAGCAATATCCATGGGTCCT...GGGCAAGAGTTCCATGATTTTGATACTGTACCTTTGGATCCACCATGGGTTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
3UTR-3UTR CCA 90 bp GACAGTTGCAACCCATGGTGGATCCAAAGGTACAGTATCAAAATCATGGAACTCAGGACGCAGTGTATTTaGGGGAAAGGGTTTAAAAAT +
Preference number: 2 (lower is better)
Translates to: DSCNPWWIQRYSIKIMELRTQCI*GKGFKN
Trigger: ATTTTTAAACCCTTTCCCCCAAATACACTGCGTCCT...GAGTTCCATGATTTTGATACTGTACCTTTGGATCCACCATGGGTTGCAACTGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
3UTR-3UTR TCA 90 bp ACTTACTTACTTACCAGAGGGTGGTTCAAGTCAAACAAACAAAACCAAAGACAGAGAAAACCTTATTTATaGGGTCCCATTGCCCTCGCA +
Preference number: 2 (lower is better)
Translates to: TYLLTRGWFKSNKQNQRQRKPYL*GPIALA
Trigger: TGCGAGGGCAATGGGACCTCATAAATAAGGTTTTCT...CTGTCTTTGGTTTTGTTTGTTTGACTTGAACCACCCTCTGGTAAGTAAGTAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
3UTR-3UTR GCA 90 bp GACAGTTGCAACCCATGGTGGATCCAAAGGTACAGTATCAAAATCATGGAACTCAGGACCCATGGATATTaGTGCAGTTCAAATACAATA +
Preference number: 2 (lower is better)
Translates to: DSCNPWWIQRYSIKIMELRTHGY*CSSNTI
Trigger: TATTGTATTTGAACTGCAGCAATATCCATGGGTCCT...GAGTTCCATGATTTTGATACTGTACCTTTGGATCCACCATGGGTTGCAACTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
3UTR-3UTR GCA 90 bp AACAAACTAGTGTATCTAAGTTTACCTGGTTGCGAGTGCATTATTATTCCAGTTGCCATGATCTGTTGCTaGATTAGATGCAGAGGCAGG +
Preference number: 2 (lower is better)
Translates to: NKLVYLSLPGCECIIIPVAMICC*IRCRGR
Trigger: CCTGCCTCTGCATCTAATGCAGCAACAGATCATGGC...AACTGGAATAATAATGCACTCGCAACCAGGTAAACTTAGATACACTAGTTTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR-3UTR GCA 90 bp ATCATGGAACTCTTGCCCAAAGAAAAGACTGCAAATAGTCATCTGGTATATCTTAAATTTTGGGTCCCTTaGATAGCGTCCCAAGCCTTC +
Preference number: 2 (lower is better)
Translates to: IMELLPKEKTANSHLVYLKFWVP*IASQAF
Trigger: GAAGGCTTGGGACGCTATGCAAGGGACCCAAAATTT...AAGATATACCAGATGACTATTTGCAGTCTTTTCTTTGGGCAAGAGTTCCATGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR-3UTR CCA 90 bp ATCATGGAACTCTTGCCCAAAGAAAAGACTGCAAATAGTCATCTGGTATATCTTGACAGTTGCAACCCATaGTGGATCCAAAGGTACAGT +
Preference number: 2 (lower is better)
Translates to: IMELLPKEKTANSHLVYLDSCNP*WIQRYS
Trigger: ACTGTACCTTTGGATCCACCATGGGTTGCAACTGTC...AAGATATACCAGATGACTATTTGCAGTCTTTTCTTTGGGCAAGAGTTCCATGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
3UTR CAA 90 bp AATCAGCTGAGAATTCAAGATCAGACACCCTTATCGACCAACATCTaGGGCAAAAATCTGCTATTCTTAAGATGTGAAAATGCAACCTGC +
Preference number: 2 (lower is better)
Translates to: NQLRIQDQTPLSTNI*GKNLLFLRCENATC
Trigger: GCAGGTTGCATTTTCACATCTTAAGAATAGCAGATTTTTGCCCAAGATGTTGGTCGATAAGGGTGTCTGATCTTGAATTCTCAGCTGATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636938.1
3UTR-3UTR TCA 90 bp TTGGACCAAAATTGCTACCTATCATCTATCTTTTTGATTGCAGGGAATCCCTGCGGTTTATGGCTTTCTTaGGGCATGACATCTCTTATA +
Preference number: 2 (lower is better)
Translates to: LDQNCYLSSIFLIAGNPCGLWLS*GMTSLI
Trigger: TATAAGAGATGTCATGCCTCAAGAAAGCCATAAACC...GCAGGGATTCCCTGCAATCAAAAAGATAGATGATAGGTAGCAATTTTGGTCCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
3UTR-3UTR GCA 90 bp ATCATGGAACTCTTGCCCAAAGAAAAGACTGCAAATAGTCATCTGGTATATCTTTTTATGAGGTCCCATTaGCCTCGCAATAATCACTGG +
Preference number: 2 (lower is better)
Translates to: IMELLPKEKTANSHLVYLFMRSH*PRNNHW
Trigger: CCAGTGATTATTGCGAGGGCAATGGGACCTCATAAA...AAGATATACCAGATGACTATTTGCAGTCTTTTCTTTGGGCAAGAGTTCCATGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
3UTR-3UTR GCA 90 bp ACTTACTTACTTACCAGAGGGTGGTTCAAGTCAAACAAACAAAACCAAAGACAGAAAACCAAAGACAGTTaGAACCCATGGTGGATCCAA +
Preference number: 2 (lower is better)
Translates to: TYLLTRGWFKSNKQNQRQKTKDS*NPWWIQ
Trigger: TTGGATCCACCATGGGTTGCAACTGTCTTTGGTTTT...CTGTCTTTGGTTTTGTTTGTTTGACTTGAACCACCCTCTGGTAAGTAAGTAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
3UTR CAA 90 bp TCAGAGTGTGAGTGCATTCTAATGAAAACTTCAGCCCTCATTCAATaGCATATAAAAGCCCTCAAAGAGAACATACAGTACAGCAGTTTT +
Preference number: 2 (lower is better)
Translates to: SECECILMKTSALIQ*HIKALKENIQYSSF
Trigger: AAAACTGCTGTACTGTATGTTCTCTTTGAGGGCTTTTATATGCAATTGAATGAGGGCTGAAGTTTTCATTAGAATGCACTCACACTCTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
3UTR-3UTR CCA 90 bp ACTTACTTACTTACCAGAGGGTGGTTCAAGTCAAACAAACAAAACCAAAGACAGCTAATTATCCAAAAGTaGGTTTTCATCAGGACGTAC +
Preference number: 2 (lower is better)
Translates to: TYLLTRGWFKSNKQNQRQLIIQK*VFIRTY
Trigger: GTACGTCCTGATGAAAACCCACTTTTGGATAATTAG...CTGTCTTTGGTTTTGTTTGTTTGACTTGAACCACCCTCTGGTAAGTAAGTAAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
3UTR CCA 72 bp GTAGCACGGTGTCCAGTCCCGGTAGGGAGGGGTTGCTaGAGGGGTGGCCCACGACCGGGTCGAGTGACTCGG +
Preference number: 3 (lower is better)
Translates to: VARCPVPVGRGC*RGGPRPGRVTR
Trigger: CCGAGTCACTCGACCCGGTCGTGGGCCACCCCTCCAGCAACCCCTCCCTACCGGGACTGGACACCGTGCTAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR-3UTR CAA 90 bp AACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTCCGCCATGCCTTCAGTaGGGTGGGCCTGGTGCCCTG +
Preference number: 3 (lower is better)
Translates to: NFPLHPAAMPSVGWAWCPPPCLQ*GGPGAL
Trigger: CAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGG...AGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
3UTR GCA 72 bp GGTGTAGCACGGTGTCCAGTCCCGGTAGGGAGGGGTTaGTGGAGGGGTGGCCCACGACCGGGTCGAGTGACT +
Preference number: 3 (lower is better)
Translates to: GVARCPVPVGRG*WRGGPRPGRVT
Trigger: AGTCACTCGACCCGGTCGTGGGCCACCCCTCCAGCAACCCCTCCCTACCGGGACTGGACACCGTGCTACACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR GCA 72 bp CTGTGTACCAGGAGCTGCGGTGCAGGGACGGCAGGCTaGCGTTCACCTGGTCCAGGGCCTCTGACTGCTCCA +
Preference number: 3 (lower is better)
Translates to: LCTRSCGAGTAG*RSPGPGPLTAP
Trigger: TGGAGCAGTCAGAGGCCCTGGACCAGGTGAACGGCAGCCTGCCGTCCCTGCACCGCAGCTCCTGGTACACAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR GCA 72 bp GAGATGTCGGGCTCGTCTGTGTACCAGGAGCTGCGGTaGAGGGACGGCAGGCTGCCGTTCACCTGGTCCAGG +
Preference number: 3 (lower is better)
Translates to: EMSGSSVYQELR*RDGRLPFTWSR
Trigger: CCTGGACCAGGTGAACGGCAGCCTGCCGTCCCTGCACCGCAGCTCCTGGTACACAGACGAGCCCGACATCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR CCA 72 bp CTCTGTGAGAGGGCGGGGCCTGCTGTTTCCTGCAGCTaGGGCCGAGCGCATGGTACTCTGCCAGGCTCAACC +
Preference number: 3 (lower is better)
Translates to: LCERAGPAVSCS*GRAHGTLPGST
Trigger: GGTTGAGCCTGGCAGAGTACCATGCGCTCGGCCCCAGCTGCAGGAAACAGCAGGCCCCGCCCTCTCACAGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
3UTR CCA 72 bp GAGCTGCGGTGCAGGGACGGCAGGCTGCCGTTCACCTaGTCCAGGGCCTCTGACTGCTCCACTTGGATCAGG +
Preference number: 3 (lower is better)
Translates to: ELRCRDGRLPFT*SRASDCSTWIR
Trigger: CCTGATCCAAGTGGAGCAGTCAGAGGCCCTGGACCAGGTGAACGGCAGCCTGCCGTCCCTGCACCGCAGCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR-3UTR CAA 90 bp ACCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGCCGCCATGCCTTCAGTaGGGTGGGCCTGGTGCCCTG +
Preference number: 3 (lower is better)
Translates to: TFNFPLHPAAMPSVGWAWPPCLQ*GGPGAL
Trigger: CAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGG...CCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
3UTR-3UTR CAA 90 bp CGGTGCAGGGACGGCAGGCTGCCGTTCACCTGGTCCAGGGCCTCTGACTGCTCCCGCAGGCACTCAAAGTaGAAGGAGGATCTCCGGTGG +
Preference number: 3 (lower is better)
Translates to: RCRDGRLPFTWSRASDCSRRHSK*KEDLRW
Trigger: CCACCGGAGATCCTCCTTCAACTTTGAGTGCCTGCG...GGAGCAGTCAGAGGCCCTGGACCAGGTGAACGGCAGCCTGCCGTCCCTGCACCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR GCA 72 bp CACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTaGCCTGGTACATGGGAGAAGCAGACTCCACAGCAG +
Preference number: 3 (lower is better)
Translates to: HPAAMPSVGWAW*PGTWEKQTPQQ
Trigger: CTGCTGTGGAGTCTGCTTCTCCCATGTACCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
3UTR GCA 72 bp GGTAGGAGATGTCGGGCTCGTCTGTGTACCAGGAGCTaGGGTGCAGGGACGGCAGGCTGCCGTTCACCTGGT +
Preference number: 3 (lower is better)
Translates to: GRRCRARLCTRS*GAGTAGCRSPG
Trigger: ACCAGGTGAACGGCAGCCTGCCGTCCCTGCACCGCAGCTCCTGGTACACAGACGAGCCCGACATCTCCTACC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR TCA 72 bp CTTCCTGGCTGCTCTGCCGGCGCAGGCACTCAAAGTTaGAGGAGGATCTCCGGTGGGATGCTGGGGTGGGAG +
Preference number: 3 (lower is better)
Translates to: LPGCSAGAGTQS*RRISGGMLGWE
Trigger: CTCCCACCCCAGCATCCCACCGGAGATCCTCCTTCAACTTTGAGTGCCTGCGCCGGCAGAGCAGCCAGGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR CCA 72 bp TTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTaGGCCTGGTGCCCTGGTACATGGGAGAAGCAGACT +
Preference number: 3 (lower is better)
Translates to: FPLHPAAMPSVG*AWCPGTWEKQT
Trigger: AGTCTGCTTCTCCCATGTACCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
3UTR CCA 72 bp TTAGATGCAGAGGCAGGGCCGTGCGATGGGGGAAGATaGGAGACGACGGGACCTCTTCCTGGCTGCTCTGCC +
Preference number: 3 (lower is better)
Translates to: LDAEAGPCDGGR*ETTGPLPGCSA
Trigger: GGCAGAGCAGCCAGGAAGAGGTCCCGTCGTCTCCCATCTTCCCCCATCGCACGGCCCTGCCTCTGCATCTAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR-3UTR CAA 90 bp GCGCCGAGGGGCCTGTCAGTCTTTGGGAGTTCGGGCAAACTAGGGATGCAGGACGGAGGAGTGCTTTGCTaGGAAGGGGTCTCCCTGGGG +
Preference number: 3 (lower is better)
Translates to: APRGLSVFGSSGKLGMQDGGVLC*EGVSLG
Trigger: CCCCAGGGAGACCCCTTCCAAGCAAAGCACTCCTCC...GTCCTGCATCCCTAGTTTGCCCGAACTCCCAAAGACTGACAGGCCCCTCGGCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
3UTR GCA 72 bp CTGTTTCCTGCAGCTGGGGCCGAGCGCATGGTACTCTaGCAGGCTCAACCGCTTGGGACCTGTTCCTACCAG +
Preference number: 3 (lower is better)
Translates to: LFPAAGAERMVL*QAQPLGTCSYQ
Trigger: CTGGTAGGAACAGGTCCCAAGCGGTTGAGCCTGGCAGAGTACCATGCGCTCGGCCCCAGCTGCAGGAAACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
3UTR GCA 72 bp TGCCCTGGTACATGGGAGAAGCAGACTCCACAGCAGTaGCCATCTGGACAATGGGGCAGGGCAGGTCTGGCC +
Preference number: 3 (lower is better)
Translates to: CPGTWEKQTPQQ*PSGQWGRAGLA
Trigger: GGCCAGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTACCAGGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
3UTR-3UTR CAA 90 bp CTTAAGCAGCACCACCAGTCCCCAGAGGACAAGAGCAGCTATATCTCATCCACCGGGCCCACATCCCCGTaGGCTCGGGGACGCACGTTC +
Preference number: 3 (lower is better)
Translates to: LKQHHQSPEDKSSYISSTGPTSP*ARGRTF
Trigger: GAACGTGCGTCCCCGAGCCAACGGGGATGTGGGCCC...GGTGGATGAGATATAGCTGCTCTTGTCCTCTGGGGACTGGTGGTGCTGCTTAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR GCA 72 bp TCGGGGACGCACGTTCCCATTAAGCAGGGTGCTGGCTaGACTCTCCATCTCGTCGATGGTGAGGTCACAGGC +
Preference number: 3 (lower is better)
Translates to: SGTHVPIKQGAG*TLHLVDGEVTG
Trigger: GCCTGTGACCTCACCATCGACGAGATGGAGAGTGCAGCCAGCACCCTGCTTAATGGGAACGTGCGTCCCCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR CCA 72 bp AGAGCAGGGCCGGACGCTCAGGAGGTCATGGCGGACTaGCATACAAAAGGAACTCTGTCAGCTCAGCGCCGA +
Preference number: 3 (lower is better)
Translates to: RAGPDAQEVMAD*HTKGTLSAQRR
Trigger: TCGGCGCTGAGCTGACAGAGTTCCTTTTGTATGCCAGTCCGCCATGACCTCCTGAGCGTCCGGCCCTGCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
3UTR CCA 72 bp TTCATCCGCCAGGTCCTCCTCATCCCTCCCAGGGTCTaGCTCTTCGTCGCTGTAGCCAGGACCAAAGTCCTG +
Preference number: 3 (lower is better)
Translates to: FIRQVLLIPPRV*LFVAVARTKVL
Trigger: CAGGACTTTGGTCCTGGCTACAGCGACGAAGAGCCAGACCCTGGGAGGGATGAGGAGGACCTGGCGGATGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR-3UTR CAA 90 bp AGCGCCGAGGGGCCTGTCAGTCTTTGGGAGTTCGGGCAAACTAGGGATGCAGGATTCCGGAGGAGTGCTTaGCTTGGAAGGGGTCTCCCT +
Preference number: 3 (lower is better)
Translates to: SAEGPVSLWEFGQTRDAGFRRSA*LGRGLP
Trigger: AGGGAGACCCCTTCCAAGCAAAGCACTCCTCCGGAA...TCCTGCATCCCTAGTTTGCCCGAACTCCCAAAGACTGACAGGCCCCTCGGCGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
3UTR TCA 72 bp GGGGTTGCTGGAGGGGTGGCCCACGACCGGGTCGAGTaGCTCGGTGAGTACTTCTGGGCTTTACTTGAATCT +
Preference number: 3 (lower is better)
Translates to: GVAGGVAHDRVE*LGEYFWALLES
Trigger: AGATTCAAGTAAAGCCCAGAAGTACTCACCGAGTCACTCGACCCGGTCGTGGGCCACCCCTCCAGCAACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR GCA 72 bp TCATCACCTTTAACTTTCCCCTGCACCCCGCCGCCATaGCTTCAGTTGGGTGGGCCTGGTGCCCTGGTACAT +
Preference number: 3 (lower is better)
Translates to: SSPLTFPCTPPP*LQLGGPGALVH
Trigger: ATGTACCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGGTGATGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
3UTR GCA 72 bp CCTGTCCACTTCTCACTGTATTCTGGACTGGGTCTCTaGAGAGAGCAGGGCCGGACGCTCAGGAGGTCATGG +
Preference number: 3 (lower is better)
Translates to: PVHFSLYSGLGL*REQGRTLRRSW
Trigger: CCATGACCTCCTGAGCGTCCGGCCCTGCTCTCTGCAGAGACCCAGTCCAGAATACAGTGAGAAGTGGACAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
3UTR GCA 72 bp AAGATGGGAGACGACGGGACCTCTTCCTGGCTGCTCTaGCGGCGCAGGCACTCAAAGTTGAAGGAGGATCTC +
Preference number: 3 (lower is better)
Translates to: KMGDDGTSSWLL*RRRHSKLKEDL
Trigger: GAGATCCTCCTTCAACTTTGAGTGCCTGCGCCGGCAGAGCAGCCAGGAAGAGGTCCCGTCGTCTCCCATCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR CCA 72 bp CCCTGGCACAGTACCTGCCCTGTCGGAGGCTCTCACTaGCAAATGACAGCTCTGTGCAAGGAGCACTCCCAA +
Preference number: 3 (lower is better)
Translates to: PWHSTCPVGGSH*QMTALCKEHSQ
Trigger: TTGGGAGTGCTCCTTGCACAGAGCTGTCATTTGCCAGTGAGAGCCTCCGACAGGGCAGGTACTGTGCCAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
3UTR CCA 72 bp CTCTGCAGAGAGCAGGGCCGGACGCTCAGGAGGTCATaGCGGACTGGCATACAAAAGGAACTCTGTCAGCTC +
Preference number: 3 (lower is better)
Translates to: LCREQGRTLRRS*RTGIQKELCQL
Trigger: GAGCTGACAGAGTTCCTTTTGTATGCCAGTCCGCCATGACCTCCTGAGCGTCCGGCCCTGCTCTCTGCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
3UTR CCA 72 bp CTGAGCTTCCTGGCCTGTCCACTTCTCACTGTATTCTaGACTGGGTCTCTGCAGAGAGCAGGGCCGGACGCT +
Preference number: 3 (lower is better)
Translates to: LSFLACPLLTVF*TGSLQRAGPDA
Trigger: AGCGTCCGGCCCTGCTCTCTGCAGAGACCCAGTCCAGAATACAGTGAGAAGTGGACAGGCCAGGAAGCTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
3UTR TCA 72 bp GCTTTGTACGTTCCCTTTCACGAAAAAGAACCACCGTaGGCAACGTCCGCGACAGGCAGCCCTGGCTCCGCA +
Preference number: 3 (lower is better)
Translates to: ALYVPFHEKEPP*ATSATGSPGSA
Trigger: TGCGGAGCCAGGGCTGCCTGTCGCGGACGTTGCTCACGGTGGTTCTTTTTCGTGAAAGGGAACGTACAAAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
3UTR TCA 72 bp TGGGCGAGCTGTCATCCTCGTAGCATTCCTCACTACTaGAATACTCCTGCTCCCCCAAGCAGTGGGGGTCCC +
Preference number: 3 (lower is better)
Translates to: WASCHPRSIPHY*NTPAPPSSGGP
Trigger: GGGACCCCCACTGCTTGGGGGAGCAGGAGTATTTCAGTAGTGAGGAATGCTACGAGGATGACAGCTCGCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR TCA 72 bp GAGCCAGTCTGCCCCTCGCTGGGGGCTACAAGGTGGTaGTGCATATCATTTCATCCGCCAGGTCCTCCTCAT +
Preference number: 3 (lower is better)
Translates to: EPVCPSLGATRW*CISFHPPGPPH
Trigger: ATGAGGAGGACCTGGCGGATGAAATGATATGCATCACCACCTTGTAGCCCCCAGCGAGGGGCAGACTGGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR-3UTR CAA 90 bp CCTCCTCACCCATCCTCTGTGAGAGGGCGGGGCCTGCTGTTTCCTGCAGCTGGGGCAGCTTTGGACATATaGGCATTATTGAGATTGGCA +
Preference number: 3 (lower is better)
Translates to: PPHPSSVRGRGLLFPAAGAALDI*ALLRLA
Trigger: TGCCAATCTCAATAATGCCAATATGTCCAAAGCTGC...CCCAGCTGCAGGAAACAGCAGGCCCCGCCCTCTCACAGAGGATGGGTGAGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR-3UTR CAA 90 bp TATTTCAGAACAGCTAAACAGGAACCAGGACGCAGTGTATTTGGGGGAAAGGGTCCGCCATGCCTTCAGTaGGGTGGGCCTGGTGCCCTG +
Preference number: 3 (lower is better)
Translates to: YFRTAKQEPGRSVFGGKGPPCLQ*GGPGAL
Trigger: CAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGG...ACCCTTTCCCCCAAATACACTGCGTCCTGGTTCCTGTTTAGCTGTTCTGAAATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
3UTR-3UTR CAA 90 bp ACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAAGGCAACAATACGATTaGTACAGACCCCGACACTCC +
Preference number: 3 (lower is better)
Translates to: TWEKQTPQQCPSGQWGRARQQYD*YRPRHS
Trigger: GGAGTGTCGGGGTCTGTACAAATCGTATTGTTGCCT...TGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
3UTR-3UTR CAA 90 bp AACCGTAACTATGGATACCCAAGGGGCAGAGCAGCCAGCTGGACCTGCTCTGTATGCTTGTCGCTGTTTTaGTTCCGGAAGCTGCTGGGG +
Preference number: 3 (lower is better)
Translates to: NRNYGYPRGRAASWTCSVCLSLF*FRKLLG
Trigger: CCCCAGCAGCTTCCGGAACAAAAACAGCGACAAGCA...TACAGAGCAGGTCCAGCTGGCTGCTCTGCCCCTTGGGTATCCATAGTTACGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR GCA 72 bp TCCCTGACTCCCAGTGTCCTTGAAACTAGACCACACTaGTTCCAAAGAGGCATCCCCAGACTGGCTCTGAGC +
Preference number: 3 (lower is better)
Translates to: SLTPSVLETRPH*FQRGIPRLALS
Trigger: GCTCAGAGCCAGTCTGGGGATGCCTCTTTGGAAGCAGTGTGGTCTAGTTTCAAGGACACTGGGAGTCAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000645528.2
3UTR GCA 72 bp GGGGCCTCTCAGAGTCGATGTTTCTGCCTGGGTATCTaGTGTAGTAGCCATAGTTTTGCCTGCTCCAGGTGG +
Preference number: 3 (lower is better)
Translates to: GASQSRCFCLGI*CSSHSFACSRW
Trigger: CCACCTGGAGCAGGCAAAACTATGGCTACTACAGCAGATACCCAGGCAGAAACATCGACTCTGAGAGGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR-3UTR CAA 90 bp GGTGATGCATATCATTTCATCCGCCAGGTCCTCCTCATCCCTCCCAGGGTCTGGGTAGTAGGCGTCTCCTaGGAGATCTCCGTGAATCAT +
Preference number: 3 (lower is better)
Translates to: GDAYHFIRQVLLIPPRVWVVGVS*EISVNH
Trigger: ATGATTCACGGAGATCTCCAAGGAGACGCCTACTAC...CCAGACCCTGGGAGGGATGAGGAGGACCTGGCGGATGAAATGATATGCATCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR GCA 72 bp GATGGTAGCCTCGGGGCCTCTCAGAGTCGATGTTTCTaGCTGGGTATCTGCTGTAGTAGCCATAGTTTTGCC +
Preference number: 3 (lower is better)
Translates to: DGSLGASQSRCF*LGICCSSHSFA
Trigger: GGCAAAACTATGGCTACTACAGCAGATACCCAGGCAGAAACATCGACTCTGAGAGGCCCCGAGGCTACCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR CCA 72 bp GTAGCCTCGGGGCCTCTCAGAGTCGATGTTTCTGCCTaGGTATCTGCTGTAGTAGCCATAGTTTTGCCTGCT +
Preference number: 3 (lower is better)
Translates to: VASGPLRVDVSA*VSAVVAIVLPA
Trigger: AGCAGGCAAAACTATGGCTACTACAGCAGATACCCAGGCAGAAACATCGACTCTGAGAGGCCCCGAGGCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR-3UTR CAA 90 bp AGGAACCAGGAGGATAAGAATATCCATAATTTCAGAGCTGCCCTGGCACAGTACGCCAGGCTCAACCGCTaGGGACCTGTTCCTACCAGG +
Preference number: 3 (lower is better)
Translates to: RNQEDKNIHNFRAALAQYARLNR*GPVPTR
Trigger: CCTGGTAGGAACAGGTCCCAAGCGGTTGAGCCTGGC...GTACTGTGCCAGGGCAGCTCTGAAATTATGGATATTCTTATCCTCCTGGTTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
3UTR-3UTR CAA 90 bp CAGGACTTTGGAATGGAGTCAGATACCCACCTTAGGCAGGTCTGCTTAATCTTTGGAGGAGTGCTTTGCTaGGAAGGGGTCTCCCTGGGG +
Preference number: 3 (lower is better)
Translates to: QDFGMESDTHLRQVCLIFGGVLC*EGVSLG
Trigger: CCCCAGGGAGACCCCTTCCAAGCAAAGCACTCCTCC...AAAGATTAAGCAGACCTGCCTAAGGTGGGTATCTGACTCCATTCCAAAGTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
3UTR-3UTR CAA 90 bp TTTGGGTGTGGTGGTGTTTCCTGTGGACACGTTAAGATGGAACCTGAGGTGTTGTTCCGGAGGAGTGCTTaGCTTGGAAGGGGTCTCCCT +
Preference number: 3 (lower is better)
Translates to: FGCGGVSCGHVKMEPEVLFRRSA*LGRGLP
Trigger: AGGGAGACCCCTTCCAAGCAAAGCACTCCTCCGGAA...CAACACCTCAGGTTCCATCTTAACGTGTCCACAGGAAACACCACCACACCCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000645528.2
3UTR-3UTR CAA 90 bp AGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTGGTTTCCATGGGCAGCTTaGGACATATTGGCATTATTG +
Preference number: 3 (lower is better)
Translates to: RSRLHSSAHLDNGAGQVWFPWAA*DILALL
Trigger: CAATAATGCCAATATGTCCAAAGCTGCCCATGGAAA...CCAGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR GCA 72 bp ATATCCATAATTTCAGAGCTGCCCTGGCACAGTACCTaGCCTGTCGGAGGCTCTCACTGGCAAATGACAGCT +
Preference number: 3 (lower is better)
Translates to: ISIISELPWHST*PVGGSHWQMTA
Trigger: AGCTGTCATTTGCCAGTGAGAGCCTCCGACAGGGCAGGTACTGTGCCAGGGCAGCTCTGAAATTATGGATAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
3UTR CCA 72 bp AGGAGGATAAGAATATCCATAATTTCAGAGCTGCCCTaGCACAGTACCTGCCCTGTCGGAGGCTCTCACTGG +
Preference number: 3 (lower is better)
Translates to: RRIRISIISELP*HSTCPVGGSHW
Trigger: CCAGTGAGAGCCTCCGACAGGGCAGGTACTGTGCCAGGGCAGCTCTGAAATTATGGATATTCTTATCCTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
3UTR CCA 72 bp GCCCATTTTCAGACACATGCTCAAGGTTCCCAATGCTaGGCCGCTTTCCATGGGCAGCTTTGGACATATTGG +
Preference number: 3 (lower is better)
Translates to: AHFQTHAQGSQC*AAFHGQLWTYW
Trigger: CCAATATGTCCAAAGCTGCCCATGGAAAGCGGCCCAGCATTGGGAACCTTGAGCATGTGTCTGAAAATGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR-3UTR CAA 90 bp GAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTGAGGTTTATGGCTTTCTaGAGGCATGACATCTCTTAT +
Preference number: 3 (lower is better)
Translates to: EKQTPQQCPSGQWGRAGLRFMAF*RHDISY
Trigger: ATAAGAGATGTCATGCCTCAAGAAAGCCATAAACCT...CAGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
3UTR-3UTR CAA 90 bp ACCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGGTCATCTGGTATATCTaGTGGAAAGATGATAGGTTT +
Preference number: 3 (lower is better)
Translates to: TFNFPLHPAAMPSVGWAWVIWYI*WKDDRF
Trigger: AAACCTATCATCTTTCCACAAGATATACCAGATGAC...CCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
3UTR-3UTR CAA 90 bp GAAATGGCGCTCCCTGCGGCTGGTATTAGGTTACCATTGGCACCGAAGGAACCACAAAACCAAAGACAGTaGCAACCCATGGTGGATCCA +
Preference number: 3 (lower is better)
Translates to: EMALPAAGIRLPLAPKEPQNQRQ*QPMVDP
Trigger: TGGATCCACCATGGGTTGCAACTGTCTTTGGTTTTG...TGGTTCCTTCGGTGCCAATGGTAACCTAATACCAGCCGCAGGGAGCGCCATTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
3UTR-3UTR CAA 90 bp CTTAAGCAGCACCACCAGTCCCCAGAGGACAAGAGCAGCTATATCTCATCCACCGGTATTAGGTTACCATaGGCACCGAAGGAACCAGGA +
Preference number: 3 (lower is better)
Translates to: LKQHHQSPEDKSSYISSTGIRLP*APKEPG
Trigger: TCCTGGTTCCTTCGGTGCCAATGGTAACCTAATACC...GGTGGATGAGATATAGCTGCTCTTGTCCTCTGGGGACTGGTGGTGCTGCTTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
3UTR-3UTR CAA 90 bp GTTAAGCTTTGTACGTTCCCTTTCACGAAAAAGAACCACCGTGAGCAACGTCCGTTCCGGAGGAGTGCTTaGCTTGGAAGGGGTCTCCCT +
Preference number: 3 (lower is better)
Translates to: VKLCTFPFTKKNHREQRPFRRSA*LGRGLP
Trigger: AGGGAGACCCCTTCCAAGCAAAGCACTCCTCCGGAA...CGGACGTTGCTCACGGTGGTTCTTTTTCGTGAAAGGGAACGTACAAAGCTTAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
3UTR-3UTR CAA 90 bp TCATCACCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGAGGTTTATGGCTTTCTaGAGGCATGACATCTCTTAT +
Preference number: 3 (lower is better)
Translates to: SSPLTFPCTPPPCLQLGGRFMAF*RHDISY
Trigger: ATAAGAGATGTCATGCCTCAAGAAAGCCATAAACCT...CCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGGTGATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
3UTR-3UTR CAA 90 bp CCTGGTACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGTTTATGGCTTTCTaGAGGCATGACATCTCTTAT +
Preference number: 3 (lower is better)
Translates to: PGTWEKQTPQQCPSGQWGRFMAF*RHDISY
Trigger: ATAAGAGATGTCATGCCTCAAGAAAGCCATAAACCT...GCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTACCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
3UTR-3UTR CAA 90 bp AGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTGGGTCATCTGGTATATCTaGTGGAAAGATGATAGGTTT +
Preference number: 3 (lower is better)
Translates to: RSRLHSSAHLDNGAGQVWVIWYI*WKDDRF
Trigger: AAACCTATCATCTTTCCACAAGATATACCAGATGAC...CCAGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
3UTR-3UTR CAA 90 bp GAGCTTCCTGGCCTGTCCACTTCTCACTGTATTCTGGACTGGGTCTCTGCAGAGTCTCTGAGTCTCTGCTaGGAAGGGAAAACTGTTAAG +
Preference number: 3 (lower is better)
Translates to: ELPGLSTSHCILDWVSAESLSLC*EGKTVK
Trigger: CTTAACAGTTTTCCCTTCCAAGCAGAGACTCAGAGA...CTCTGCAGAGACCCAGTCCAGAATACAGTGAGAAGTGGACAGGCCAGGAAGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
3UTR TCA 72 bp CACTTAGGGTCCTGGTCTGGCAATTTTGGCCTGATGTaGTGCCACAAGACCCAACAGAGAGAGACACAGAGT +
Preference number: 3 (lower is better)
Translates to: HLGSWSGNFGLM*CHKTQQRETQS
Trigger: ACTCTGTGTCTCTCTCTGTTGGGTCTTGTGGCATCACATCAGGCCAAAATTGCCAGACCAGGACCCTAAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
3UTR GCA 72 bp TATGGATACCCAAGGGGCAGAGCAGCCAGCTGGACCTaGTCTGTAATTCACTTACTTACTTACCAGAGGGTG +
Preference number: 3 (lower is better)
Translates to: YGYPRGRAASWT*SVIHLLTYQRV
Trigger: CACCCTCTGGTAAGTAAGTAAGTGAATTACAGAGCAGGTCCAGCTGGCTGCTCTGCCCCTTGGGTATCCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
3UTR GCA 72 bp GATGCCCATTTTCAGACACATGCTCAAGGTTCCCAATaGTGGGCCGCTTTCCATGGGCAGCTTTGGACATAT +
Preference number: 3 (lower is better)
Translates to: DAHFQTHAQGSQ*WAAFHGQLWTY
Trigger: ATATGTCCAAAGCTGCCCATGGAAAGCGGCCCAGCATTGGGAACCTTGAGCATGTGTCTGAAAATGGGCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR CCA 72 bp GATCATCGCCTCTATCAGACACTTAGGGTCCTGGTCTaGCAATTTTGGCCTGATGTGATGCCACAAGACCCA +
Preference number: 3 (lower is better)
Translates to: DHRLYQTLRVLV*QFWPDVMPQDP
Trigger: TGGGTCTTGTGGCATCACATCAGGCCAAAATTGCCAGACCAGGACCCTAAGTGTCTGATAGAGGCGATGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
3UTR CCA 72 bp CGTAACTATGGATACCCAAGGGGCAGAGCAGCCAGCTaGACCTGCTCTGTAATTCACTTACTTACTTACCAG +
Preference number: 3 (lower is better)
Translates to: RNYGYPRGRAAS*TCSVIHLLTYQ
Trigger: CTGGTAAGTAAGTAAGTGAATTACAGAGCAGGTCCAGCTGGCTGCTCTGCCCCTTGGGTATCCATAGTTACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
3UTR CCA 72 bp AAATGGCGCTCCCTGCGGCTGGTATTAGGTTACCATTaGCACCGAAGGAACCAGGAGGATAAGAATATCCAT +
Preference number: 3 (lower is better)
Translates to: KWRSLRLVLGYH*HRRNQEDKNIH
Trigger: ATGGATATTCTTATCCTCCTGGTTCCTTCGGTGCCAATGGTAACCTAATACCAGCCGCAGGGAGCGCCATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
3UTR CCA 72 bp CTCTATCAGACACTTAGGGTCCTGGTCTGGCAATTTTaGCCTGATGTGATGCCACAAGACCCAACAGAGAGA +
Preference number: 3 (lower is better)
Translates to: LYQTLRVLVWQF*PDVMPQDPTER
Trigger: TCTCTCTGTTGGGTCTTGTGGCATCACATCAGGCCAAAATTGCCAGACCAGGACCCTAAGTGTCTGATAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
3UTR CCA 72 bp TTGGGTGTGGTGGTGTTTCCTGTGGACACGTTAAGATaGAACCTGAGGTGTTGCCTGGATTGGTTTTGGCAT +
Preference number: 3 (lower is better)
Translates to: LGVVVFPVDTLR*NLRCCLDWFWH
Trigger: ATGCCAAAACCAATCCAGGCAACACCTCAGGTTCCATCTTAACGTGTCCACAGGAAACACCACCACACCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000645528.2
3UTR-3UTR CAA 90 bp CGACACTCCAATCCTATAGATCACCACGTTGCTCCTCTGTCCCCAGCACCCCTTTTAAAAATGGATATGTaGGGCCCAGTGACTGATATG +
Preference number: 3 (lower is better)
Translates to: RHSNPIDHHVAPLSPAPLLKMDM*GPVTDM
Trigger: CATATCAGTCACTGGGCCCAACATATCCATTTTTAA...AAGGGGTGCTGGGGACAGAGGAGCAACGTGGTGATCTATAGGATTGGAGTGTCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
3UTR-3UTR CAA 90 bp AACCGTAACTATGGATACCCAAGGGGCAGAGCAGCCAGCTGGACCTGCTCTGTATCTAAGTTTACCTGGTaGCGAGTGCATTATTATTCC +
Preference number: 3 (lower is better)
Translates to: NRNYGYPRGRAASWTCSVSKFTW*RVHYYS
Trigger: GGAATAATAATGCACTCGCAACCAGGTAAACTTAGA...TACAGAGCAGGTCCAGCTGGCTGCTCTGCCCCTTGGGTATCCATAGTTACGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
3UTR TCA 72 bp GAGGTCACAGGCATCAGCGATTTCGTGTTTTGTTGCTaGCACAAATTTTGGGTCCCTTGCATAGCGTCCCAA +
Preference number: 3 (lower is better)
Translates to: EVTGISDFVFCC*HKFWVPCIASQ
Trigger: TTGGGACGCTATGCAAGGGACCCAAAATTTGTGTCAGCAACAAAACACGAAATCGCTGATGCCTGTGACCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR GCA 72 bp TTTCCTGTGGACACGTTAAGATGGAACCTGAGGTGTTaGCTGGATTGGTTTTGGCATGCGGGTGTATGTGTT +
Preference number: 3 (lower is better)
Translates to: FPVDTLRWNLRC*LDWFWHAGVCV
Trigger: AACACATACACCCGCATGCCAAAACCAATCCAGGCAACACCTCAGGTTCCATCTTAACGTGTCCACAGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
3UTR CCA 72 bp ACATGCTCAAGGTTCCCAATGCTGGGCCGCTTTCCATaGGCAGCTTTGGACATATTGGCATTATTGAGATTG +
Preference number: 3 (lower is better)
Translates to: TCSRFPMLGRFP*AALDILALLRL
Trigger: CAATCTCAATAATGCCAATATGTCCAAAGCTGCCCATGGAAAGCGGCCCAGCATTGGGAACCTTGAGCATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR-3UTR CAA 90 bp AACCGTAACTATGGATACCCAAGGGGCAGAGCAGCCAGCTGGACCTGCTCTGTAGACATATTGGCATTATaGAGATTGGCATTTGTTGAG +
Preference number: 3 (lower is better)
Translates to: NRNYGYPRGRAASWTCSVDILAL*RLAFVE
Trigger: CTCAACAAATGCCAATCTCAATAATGCCAATATGTC...TACAGAGCAGGTCCAGCTGGCTGCTCTGCCCCTTGGGTATCCATAGTTACGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR-3UTR CAA 90 bp GACAGTTGCAACCCATGGTGGATCCAAAGGTACAGTATCAAAATCATGGAACTCACTTCTGGGCTTTACTaGAATCTAGGCCGGCAACTG +
Preference number: 3 (lower is better)
Translates to: DSCNPWWIQRYSIKIMELTSGLY*NLGRQL
Trigger: CAGTTGCCGGCCTAGATTCAAGTAAAGCCCAGAAGT...GAGTTCCATGATTTTGATACTGTACCTTTGGATCCACCATGGGTTGCAACTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR CCA 72 bp GGCTCAGCATCAGATGTACAGACTCCAACCACCACTTaGAATCAGCTGAGAATTCAAGATCAGACACCCTTA +
Preference number: 3 (lower is better)
Translates to: GSASDVQTPTTT*NQLRIQDQTPL
Trigger: TAAGGGTGTCTGATCTTGAATTCTCAGCTGATTCCAAGTGGTGGTTGGAGTCTGTACATCTGATGCTGAGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636938.1
3UTR TCA 72 bp CAGATGTACAGACTCCAACCACCACTTGGAATCAGCTaGGAATTCAAGATCAGACACCCTTATCGACCAACA +
Preference number: 3 (lower is better)
Translates to: QMYRLQPPLGIS*EFKIRHPYRPT
Trigger: TGTTGGTCGATAAGGGTGTCTGATCTTGAATTCTCAGCTGATTCCAAGTGGTGGTTGGAGTCTGTACATCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636938.1
3UTR CCA 72 bp GACACGTTAAGATGGAACCTGAGGTGTTGCCTGGATTaGTTTTGGCATGCGGGTGTATGTGTTAGTTTCAAT +
Preference number: 3 (lower is better)
Translates to: DTLRWNLRCCLD*FWHAGVCVSFN
Trigger: ATTGAAACTAACACATACACCCGCATGCCAAAACCAATCCAGGCAACACCTCAGGTTCCATCTTAACGTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
3UTR-3UTR CAA 90 bp TTAAGATGTGAAAATGCAACCTGCAGGGTTACCTCTGTTGACATCTTTGTGCATATGGAACCTGAGGTGTaGCCTGGATTGGTTTTGGCA +
Preference number: 3 (lower is better)
Translates to: LRCENATCRVTSVDIFVHMEPEV*PGLVLA
Trigger: TGCCAAAACCAATCCAGGCAACACCTCAGGTTCCAT...ATGCACAAAGATGTCAACAGAGGTAACCCTGCAGGTTGCATTTTCACATCTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636938.1
3UTR TCA 72 bp TGTAAACTGGCGTCACATCACAGAAAACCTTATTTATaGGGTCCCATTGCCCTCGCAATAATCACTGGTAGC +
Preference number: 3 (lower is better)
Translates to: CKLASHHRKPYL*GPIALAIITGS
Trigger: GCTACCAGTGATTATTGCGAGGGCAATGGGACCTCATAAATAAGGTTTTCTGTGATGTGACGCCAGTTTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
3UTR TCA 72 bp GTGCATTATTATTCCAGTTTACAGTTGCCCTTAGCGTaGCAGTCAGAAACCGACCATCGGAGTGATATTCTC +
Preference number: 3 (lower is better)
Translates to: VHYYSSLQLPLA*QSETDHRSDIL
Trigger: GAGAATATCACTCCGATGGTCGGTTTCTGACTGTCACGCTAAGGGCAACTGTAAACTGGAATAATAATGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
3UTR GCA 72 bp TACCTATCATCTATCTTTTTGATTGCAGGGAATCCCTaGCAAGGTAACCTGACAGTCGGCCTAATTCTGTTG +
Preference number: 3 (lower is better)
Translates to: YLSSIFLIAGNP*QGNLTVGLILL
Trigger: CAACAGAATTAGGCCGACTGTCAGGTTACCTTGGCAGGGATTCCCTGCAATCAAAAAGATAGATGATAGGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
3UTR-3UTR CAA 90 bp AGGAACCAGGAGGATAAGAATATCCATAATTTCAGAGCTGCCCTGGCACAGTACTCTAAGTTTACCTGGTaGCGAGTGCATTATTATTCC +
Preference number: 3 (lower is better)
Translates to: RNQEDKNIHNFRAALAQYSKFTW*RVHYYS
Trigger: GGAATAATAATGCACTCGCAACCAGGTAAACTTAGA...GTACTGTGCCAGGGCAGCTCTGAAATTATGGATATTCTTATCCTCCTGGTTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
3UTR-3UTR CAA 90 bp AGTGGGGAACTACAATTATTAGGACCCATGGATATTGCTGCAGTTCAAATACAAAGGCAACAATACGATTaGTACAGACCCCGACACTCC +
Preference number: 3 (lower is better)
Translates to: SGELQLLGPMDIAAVQIQRQQYD*YRPRHS
Trigger: GGAGTGTCGGGGTCTGTACAAATCGTATTGTTGCCT...TTGTATTTGAACTGCAGCAATATCCATGGGTCCTAATAATTGTAGTTCCCCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
3UTR-3UTR CAA 90 bp AATGTTGATCTTAAAACCCAAACTGGCCACTTTGGGTGTCTTGGGCTCAGCATCTTATCGACCAACATCTaGGGCAAAAATCTGCTATTC +
Preference number: 3 (lower is better)
Translates to: NVDLKTQTGHFGCLGLSILSTNI*GKNLLF
Trigger: GAATAGCAGATTTTTGCCCAAGATGTTGGTCGATAA...GATGCTGAGCCCAAGACACCCAAAGTGGCCAGTTTGGGTTTTAAGATCAACATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636938.1
3UTR TCA 72 bp ATGGTGCAGCCTGTAAGAATGCCAGTTTGTAAGTACTaGCTTTGGAAAAGATCATCGCCTCTATCAGACACT +
Preference number: 3 (lower is better)
Translates to: MVQPVRMPVCKY*LWKRSSPLSDT
Trigger: AGTGTCTGATAGAGGCGATGATCTTTTCCAAAGTCAGTACTTACAAACTGGCATTCTTACAGGCTGCACCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
3UTR GCA 72 bp GTGGGTTTTCATCAGGACGTACAGTCAGAGTGTGAGTaGATTCTAATGAAAACTTCAGCCCTCATTCAATTG +
Preference number: 3 (lower is better)
Translates to: VGFHQDVQSECE*ILMKTSALIQL
Trigger: CAATTGAATGAGGGCTGAAGTTTTCATTAGAATGCACTCACACTCTGACTGTACGTCCTGATGAAAACCCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
3UTR-3UTR CAA 90 bp AGGAACCAGGAGGATAAGAATATCCATAATTTCAGAGCTGCCCTGGCACAGTACGTCATCTGGTATATCTaGTGGAAAGATGATAGGTTT +
Preference number: 3 (lower is better)
Translates to: RNQEDKNIHNFRAALAQYVIWYI*WKDDRF
Trigger: AAACCTATCATCTTTCCACAAGATATACCAGATGAC...GTACTGTGCCAGGGCAGCTCTGAAATTATGGATATTCTTATCCTCCTGGTTCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
3UTR-3UTR CAA 90 bp TTGGACCAAAATTGCTACCTATCATCTATCTTTTTGATTGCAGGGAATCCCTGCTTAAAAATGGATATGTaGGGCCCAGTGACTGATATG +
Preference number: 3 (lower is better)
Translates to: LDQNCYLSSIFLIAGNPCLKMDM*GPVTDM
Trigger: CATATCAGTCACTGGGCCCAACATATCCATTTTTAA...GCAGGGATTCCCTGCAATCAAAAAGATAGATGATAGGTAGCAATTTTGGTCCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
3UTR CCA 72 bp TGTTCTTCATATCACCCCCAAAATAATCACACCAAATaGCCAAAGGGCTTTCTTTATCAGTTGGCCTTAATG +
Preference number: 3 (lower is better)
Translates to: CSSYHPQNNHTK*PKGFLYQLALM
Trigger: CATTAAGGCCAACTGATAAAGAAAGCCCTTTGGCCATTTGGTGTGATTATTTTGGGGGTGATATGAAGAACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636627.1
3UTR-3UTR CAA 90 bp AGTGGGGAACTACAATTATTAGGACCCATGGATATTGCTGCAGTTCAAATACAAAGGTTTATGGCTTTCTaGAGGCATGACATCTCTTAT +
Preference number: 3 (lower is better)
Translates to: SGELQLLGPMDIAAVQIQRFMAF*RHDISY
Trigger: ATAAGAGATGTCATGCCTCAAGAAAGCCATAAACCT...TTGTATTTGAACTGCAGCAATATCCATGGGTCCTAATAATTGTAGTTCCCCACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
3UTR CCA 72 bp AACTCTTGCCCAAAGAAAAGACTGCAAATAGTCATCTaGTATATCTTGTGGAAAGATGATAGGTTTATAGTG +
Preference number: 3 (lower is better)
Translates to: NSCPKKRLQIVI*YILWKDDRFIV
Trigger: CACTATAAACCTATCATCTTTCCACAAGATATACCAGATGACTATTTGCAGTCTTTTCTTTGGGCAAGAGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
3UTR GCA 72 bp ATTTTAAACAAACTAGTGTATCTAAGTTTACCTGGTTaGGAGTGCATTATTATTCCAGTTTACAGTTGCCCT +
Preference number: 3 (lower is better)
Translates to: ILNKLVYLSLPG*ECIIIPVYSCP
Trigger: AGGGCAACTGTAAACTGGAATAATAATGCACTCGCAACCAGGTAAACTTAGATACACTAGTTTGTTTAAAAT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR GCA 90 bp CTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGGCAGGGACGGCAGGCTaGCGTTCACCTGGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: LSPAPRRHAFSWVGLVPWAGTAG*RSPGPG
Trigger: CCCTGGACCAGGTGAACGGCAGCCTGCCGTCCCTGC...CCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR GCA 90 bp AACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGCAGGGACGGCAGGCTaGCGTTCACCTGGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: NFPLHPAAMPSVGWAWCPAGTAG*RSPGPG
Trigger: CCCTGGACCAGGTGAACGGCAGCCTGCCGTCCCTGC...AGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR GCA 90 bp TGCAGAGGCAGGGCCGTGCGATGGGGGAAGATGGGAGACGACGGGACCTCTTCCTACCAGGAGCTGCGGTaGAGGGACGGCAGGCTGCCG +
Preference number: 4 (lower is better)
Translates to: CRGRAVRWGKMGDDGTSSYQELR*RDGRLP
Trigger: CGGCAGCCTGCCGTCCCTGCACCGCAGCTCCTGGTA...GGAAGAGGTCCCGTCGTCTCCCATCTTCCCCCATCGCACGGCCCTGCCTCTGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636448.1
CDS-3UTR CCA 90 bp GCAGATGAGCCACGGCCCCGCTTCCACCTTCCGGAGGAGTGCTTTGCTTGGAAGCAGAGGGCCCCGCCTTaGCCGCGCCTCTCCGTCTCC +
Preference number: 4 (lower is better)
Translates to: ADEPRPRFHLPEECFAWKQRAPP*PRLSVS
Trigger: GGAGACGGAGAGGCGCGGCCAAGGCGGGGCCCTCTG...CTTCCAAGCAAAGCACTCCTCCGGAAGGTGGAAGCGGGGCCGTGGCTCATCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000640483.1
CDS-3UTR CCA 90 bp AACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGGTTGCTGGAGGGGTaGCCCACGACCGGGTCGAGT +
Preference number: 4 (lower is better)
Translates to: NFPLHPAAMPSVGWAWCPGLLEG*PTTGSS
Trigger: ACTCGACCCGGTCGTGGGCCACCCCTCCAGCAACCC...AGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CCA 90 bp CCTCCTCACCCATCCTCTGTGAGAGGGCGGGGCCTGCTGTTTCCTGCAGCTGGGGGGTTGCTGGAGGGGTaGCCCACGACCGGGTCGAGT +
Preference number: 4 (lower is better)
Translates to: PPHPSSVRGRGLLFPAAGGLLEG*PTTGSS
Trigger: ACTCGACCCGGTCGTGGGCCACCCCTCCAGCAACCC...CCCAGCTGCAGGAAACAGCAGGCCCCGCCCTCTCACAGAGGATGGGTGAGGAGG
68% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CCA 90 bp TGCAGAGGCAGGGCCGTGCGATGGGGGAAGATGGGAGACGACGGGACCTCTTCCGGGTTGCTGGAGGGGTaGCCCACGACCGGGTCGAGT +
Preference number: 4 (lower is better)
Translates to: CRGRAVRWGKMGDDGTSSGLLEG*PTTGSS
Trigger: ACTCGACCCGGTCGTGGGCCACCCCTCCAGCAACCC...GGAAGAGGTCCCGTCGTCTCCCATCTTCCCCCATCGCACGGCCCTGCCTCTGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636448.1
CDS-3UTR CCA 90 bp AACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGCCCACATCCCCGTTaGCTCGGGGACGCACGTTCC +
Preference number: 4 (lower is better)
Translates to: NFPLHPAAMPSVGWAWCPGPHPR*LGDARS
Trigger: GGAACGTGCGTCCCCGAGCCAACGGGGATGTGGGCC...AGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR GCA 90 bp CCTCCTCACCCATCCTCTGTGAGAGGGCGGGGCCTGCTGTTTCCTGCAGCTGGGTGCACCCCGCCGCCATaGCTTCAGTTGGGTGGGCCT +
Preference number: 4 (lower is better)
Translates to: PPHPSSVRGRGLLFPAAGCTPPP*LQLGGP
Trigger: AGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCA...CCCAGCTGCAGGAAACAGCAGGCCCCGCCCTCTCACAGAGGATGGGTGAGGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CCA 90 bp ACCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCAGGGCACTGTGCTaGGCGTTGAGGCGGGGGCGG +
Preference number: 4 (lower is better)
Translates to: TFNFPLHPAAMPSVGWAWCRALC*ALRRGR
Trigger: CCGCCCCCGCCTCAACGCCCAGCACAGTGCCCTGCA...CCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR CCA 90 bp GGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTCAGAGGGCCCCGCCTTaGCCGCGCCTCTCCGTCTCC +
Preference number: 4 (lower is better)
Translates to: GEADSTAVPIWTMGQGRSQRAPP*PRLSVS
Trigger: GGAGACGGAGAGGCGCGGCCAAGGCGGGGCCCTCTG...AGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288139.11
CDS-3UTR CCA 90 bp GCTCCGCAGATGAGCCACGGCCCCGCTTCCACCTTCCGGAGGAGTGCTTTGCTTAGGAGTGGCTGCGGATaGGGTCCTCTGCGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: APQMSHGPASTFRRSALLRSGCG*GPLRPG
Trigger: CCCTGGCCGCAGAGGACCCCATCCGCAGCCACTCCT...AAGCAAAGCACTCCTCCGGAAGGTGGAAGCGGGGCCGTGGCTCATCTGCGGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR CCA 90 bp CGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCAGGCCCACATCCCCGTTaGCTCGGGGACGCACGTTCC +
Preference number: 4 (lower is better)
Translates to: RRHAFSWVGLVPWYMGEAGPHPR*LGDARS
Trigger: GGAACGTGCGTCCCCGAGCCAACGGGGATGTGGGCC...TGCTTCTCCCATGTACCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR TCA 90 bp CTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGGGCCCCCGTAAGCCATaGTGCCATCGTACATCACAG +
Preference number: 4 (lower is better)
Translates to: LSPAPRRHAFSWVGLVPWGPRKP*CHRTSQ
Trigger: CTGTGATGTACGATGGCATCATGGCTTACGGGGGCC...CCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR TCA 90 bp GAGCTGCGGTGCAGGGACGGCAGGCTGCCGTTCACCTGGTCCAGGGCCTCTGACACACTGGACCTTCTCTaGGGCTCCCGGTCATGCTTG +
Preference number: 4 (lower is better)
Translates to: ELRCRDGRLPFTWSRASDTLDLL*GSRSCL
Trigger: CAAGCATGACCGGGAGCCTCAGAGAAGGTCCAGTGT...GTCAGAGGCCCTGGACCAGGTGAACGGCAGCCTGCCGTCCCTGCACCGCAGCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636448.1
CDS-3UTR TCA 90 bp AGCGCCGAGGGGCCTGTCAGTCTTTGGGAGTTCGGGCAAACTAGGGATGCAGGACCCTGGCTCCGCAGATaGGCCACGGCCCCGCTTCCA +
Preference number: 4 (lower is better)
Translates to: SAEGPVSLWEFGQTRDAGPWLRR*ATAPLP
Trigger: TGGAAGCGGGGCCGTGGCTCATCTGCGGAGCCAGGG...TCCTGCATCCCTAGTTTGCCCGAACTCCCAAAGACTGACAGGCCCCTCGGCGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR GCA 90 bp CCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGTGTGCAGGGCACTGTaGTGGGCGTTGAGGCGGGGG +
Preference number: 4 (lower is better)
Translates to: PLTFPCTPPPCLQLGGPGVCRAL*WALRRG
Trigger: CCCCCGCCTCAACGCCCAGCACAGTGCCCTGCACAC...ACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR GCA 90 bp ACCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTACCAGGAGCTGCGGTaGAGGGACGGCAGGCTGCCG +
Preference number: 4 (lower is better)
Translates to: TFNFPLHPAAMPSVGWAWYQELR*RDGRLP
Trigger: CGGCAGCCTGCCGTCCCTGCACCGCAGCTCCTGGTA...CCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR GCA 90 bp CGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCAAGGCCAGAGCCAGTCTaGCCCTCGCTGGGGGCTACA +
Preference number: 4 (lower is better)
Translates to: RRHAFSWVGLVPWYMGEARPEPV*PSLGAT
Trigger: TGTAGCCCCCAGCGAGGGGCAGACTGGCTCTGGCCT...TGCTTCTCCCATGTACCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR GCA 90 bp CTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGCAGACTCCACAGCAGTaGCCATCTGGACAATGGGGC +
Preference number: 4 (lower is better)
Translates to: LSPAPRRHAFSWVGLVPWQTPQQ*PSGQWG
Trigger: GCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTG...CCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR GCA 90 bp CTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGCCTTTAACTTTCCCCTaGACCCCGCCGCCATGCCTT +
Preference number: 4 (lower is better)
Translates to: LSPAPRRHAFSWVGLVPWPLTFP*TPPPCL
Trigger: AAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGG...CCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CCA 90 bp CTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGTTTGCCTGCTCCAGGTaGGCGAGCTGTCATCCTCGT +
Preference number: 4 (lower is better)
Translates to: LSPAPRRHAFSWVGLVPWFACSR*ASCHPR
Trigger: ACGAGGATGACAGCTCGCCCACCTGGAGCAGGCAAA...CCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CCA 90 bp GGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCAGACTCCACAGCAGTGCCCATGACGGGACCTCTTCCTaGCTGCTCTGCCGGCGCAGG +
Preference number: 4 (lower is better)
Translates to: GGPGALVHGRSRLHSSAHDGTSS*LLCRRR
Trigger: CCTGCGCCGGCAGAGCAGCCAGGAAGAGGTCCCGTC...ATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTACCAGGGCACCAGGCCCACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CCA 90 bp GGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCAGACTCCACAGCAGTGCCCATGGCCCACATCCCCGTTaGCTCGGGGACGCACGTTCC +
Preference number: 4 (lower is better)
Translates to: GGPGALVHGRSRLHSSAHGPHPR*LGDARS
Trigger: GGAACGTGCGTCCCCGAGCCAACGGGGATGTGGGCC...ATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTACCAGGGCACCAGGCCCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR TCA 90 bp CCTCCTCACCCATCCTCTGTGAGAGGGCGGGGCCTGCTGTTTCCTGCAGCTGGGCTGGTCCAGGGCCTCTaGCTGCTCCACTTGGATCAG +
Preference number: 4 (lower is better)
Translates to: PPHPSSVRGRGLLFPAAGLVQGL*LLHLDQ
Trigger: CTGATCCAAGTGGAGCAGTCAGAGGCCCTGGACCAG...CCCAGCTGCAGGAAACAGCAGGCCCCGCCCTCTCACAGAGGATGGGTGAGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR TCA 90 bp CCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCAGACTCACCCATCCTCTGTaGGAGGGCGGGGCCTGCTGT +
Preference number: 4 (lower is better)
Translates to: PPCLQLGGPGALVHGRSRLTHPL*EGGACC
Trigger: ACAGCAGGCCCCGCCCTCTCACAGAGGATGGGTGAG...TCTGCTTCTCCCATGTACCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR TCA 90 bp TCCCTTTCACGAAAAAGAACCACCGTGAGCAACGTCCGCGACAGGCAGCCCTGGCCCTGGCTCCGCAGATaGGCCACGGCCCCGCTTCCA +
Preference number: 4 (lower is better)
Translates to: SLSRKRTTVSNVRDRQPWPWLRR*ATAPLP
Trigger: TGGAAGCGGGGCCGTGGCTCATCTGCGGAGCCAGGG...CCAGGGCTGCCTGTCGCGGACGTTGCTCACGGTGGTTCTTTTTCGTGAAAGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR GCA 90 bp CCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGGACCTCTTCCTGGCTaGTCTGCCGGCGCAGGCACT +
Preference number: 4 (lower is better)
Translates to: PLTFPCTPPPCLQLGGPGGPLPG*SAGAGT
Trigger: AGTGCCTGCGCCGGCAGAGCAGCCAGGAAGAGGTCC...ACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR GCA 90 bp AACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTTCCAGGGCCTCTGACTaGTCCACTTGGATCAGGGGG +
Preference number: 4 (lower is better)
Translates to: NFPLHPAAMPSVGWAWCPSRASD*STWIRG
Trigger: CCCCCTGATCCAAGTGGAGCAGTCAGAGGCCCTGGA...AGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR GCA 90 bp CCTCCTCACCCATCCTCTGTGAGAGGGCGGGGCCTGCTGTTTCCTGCAGCTGGGTCCAGGGCCTCTGACTaGTCCACTTGGATCAGGGGG +
Preference number: 4 (lower is better)
Translates to: PPHPSSVRGRGLLFPAAGSRASD*STWIRG
Trigger: CCCCCTGATCCAAGTGGAGCAGTCAGAGGCCCTGGA...CCCAGCTGCAGGAAACAGCAGGCCCCGCCCTCTCACAGAGGATGGGTGAGGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR GCA 90 bp GGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTGCAGGGACGGCAGGCTaGCGTTCACCTGGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: GEADSTAVPIWTMGQGRSAGTAG*RSPGPG
Trigger: CCCTGGACCAGGTGAACGGCAGCCTGCCGTCCCTGC...AGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR GCA 90 bp CCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCAGAGGGCCTGCTGTTTCCTaGAGCTGGGGCCGAGCGCAT +
Preference number: 4 (lower is better)
Translates to: PPCLQLGGPGALVHGRSRGPAVS*SWGRAH
Trigger: ATGCGCTCGGCCCCAGCTGCAGGAAACAGCAGGCCC...TCTGCTTCTCCCATGTACCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR GCA 90 bp GCTCCGCAGATGAGCCACGGCCCCGCTTCCACCTTCCGGAGGAGTGCTTTGCTTTCTGGACTGGGTCTCTaGAGAGAGCAGGGCCGGACG +
Preference number: 4 (lower is better)
Translates to: APQMSHGPASTFRRSALLSGLGL*REQGRT
Trigger: CGTCCGGCCCTGCTCTCTGCAGAGACCCAGTCCAGA...AAGCAAAGCACTCCTCCGGAAGGTGGAAGCGGGGCCGTGGCTCATCTGCGGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CCA 90 bp AGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTGGAGGAGTGGCTGCGGATaGGGTCCTCTGCGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: RSRLHSSAHLDNGAGQVWRSGCG*GPLRPG
Trigger: CCCTGGCCGCAGAGGACCCCATCCGCAGCCACTCCT...CCAGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CCA 90 bp GAGCTGCGGTGCAGGGACGGCAGGCTGCCGTTCACCTGGTCCAGGGCCTCTGACGTCACAGAGCTTCCCTaGGAGACAGGCCAGCATGAT +
Preference number: 4 (lower is better)
Translates to: ELRCRDGRLPFTWSRASDVTELP*ETGQHD
Trigger: ATCATGCTGGCCTGTCTCCCAGGGAAGCTCTGTGAC...GTCAGAGGCCCTGGACCAGGTGAACGGCAGCCTGCCGTCCCTGCACCGCAGCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636448.1
CDS-3UTR CCA 90 bp CCTCCTCACCCATCCTCTGTGAGAGGGCGGGGCCTGCTGTTTCCTGCAGCTGGGGCAGGGGACGGTGGGTaGTATTGGTCTGCTGAAGGG +
Preference number: 4 (lower is better)
Translates to: PPHPSSVRGRGLLFPAAGAGDGG*YWSAEG
Trigger: CCCTTCAGCAGACCAATACCACCCACCGTCCCCTGC...CCCAGCTGCAGGAAACAGCAGGCCCCGCCCTCTCACAGAGGATGGGTGAGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CCA 90 bp CGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCAGGTGGGATGCTGGGGTaGGAGGTAGTAGGCGTCTCC +
Preference number: 4 (lower is better)
Translates to: RRHAFSWVGLVPWYMGEAGGMLG*EVVGVS
Trigger: GGAGACGCCTACTACCTCCCACCCCAGCATCCCACC...TGCTTCTCCCATGTACCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CCA 90 bp GGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTGACGGGACCTCTTCCTaGCTGCTCTGCCGGCGCAGG +
Preference number: 4 (lower is better)
Translates to: GEADSTAVPIWTMGQGRSDGTSS*LLCRRR
Trigger: CCTGCGCCGGCAGAGCAGCCAGGAAGAGGTCCCGTC...AGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CCA 90 bp ACCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGGGCAGGGCCGTGCGATaGGGGAAGATGGGAGACGAC +
Preference number: 4 (lower is better)
Translates to: TFNFPLHPAAMPSVGWAWGRAVR*GKMGDD
Trigger: GTCGTCTCCCATCTTCCCCCATCGCACGGCCCTGCC...CCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CCA 90 bp GGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTGTAGGGAGGGGTTGCTaGAGGGGTGGCCCACGACCG +
Preference number: 4 (lower is better)
Translates to: GEADSTAVPIWTMGQGRSVGRGC*RGGPRP
Trigger: CGGTCGTGGGCCACCCCTCCAGCAACCCCTCCCTAC...AGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CCA 90 bp CGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCAAGGCTGCCGTTCACCTaGTCCAGGGCCTCTGACTGC +
Preference number: 4 (lower is better)
Translates to: RRHAFSWVGLVPWYMGEARLPFT*SRASDC
Trigger: GCAGTCAGAGGCCCTGGACCAGGTGAACGGCAGCCT...TGCTTCTCCCATGTACCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CCA 90 bp CCTCCTCACCCATCCTCTGTGAGAGGGCGGGGCCTGCTGTTTCCTGCAGCTGGGATCCCTCCCAGGGTCTaGCTCTTCGTCGCTGTAGCC +
Preference number: 4 (lower is better)
Translates to: PPHPSSVRGRGLLFPAAGIPPRV*LFVAVA
Trigger: GGCTACAGCGACGAAGAGCCAGACCCTGGGAGGGAT...CCCAGCTGCAGGAAACAGCAGGCCCCGCCCTCTCACAGAGGATGGGTGAGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CCA 90 bp CGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCATGCCCATCTGGACAATaGGGCAGGGCAGGTCTGGCC +
Preference number: 4 (lower is better)
Translates to: RRHAFSWVGLVPWYMGEACPSGQ*GRAGLA
Trigger: GGCCAGACCTGCCCTGCCCCATTGTCCAGATGGGCA...TGCTTCTCCCATGTACCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CCA 90 bp CCTCCTCACCCATCCTCTGTGAGAGGGCGGGGCCTGCTGTTTCCTGCAGCTGGGACAGCAGTGCCCATCTaGACAATGGGGCAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: PPHPSSVRGRGLLFPAAGTAVPI*TMGQGR
Trigger: CCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGT...CCCAGCTGCAGGAAACAGCAGGCCCCGCCCTCTCACAGAGGATGGGTGAGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CCA 90 bp CCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCAGACGCCATGCCTTCAGTTaGGTGGGCCTGGTGCCCTGG +
Preference number: 4 (lower is better)
Translates to: PPCLQLGGPGALVHGRSRRHAFS*VGLVPW
Trigger: CCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCG...TCTGCTTCTCCCATGTACCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CCA 90 bp ACCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGCGCCATGCCTTCAGTTaGGTGGGCCTGGTGCCCTGG +
Preference number: 4 (lower is better)
Translates to: TFNFPLHPAAMPSVGWAWRHAFS*VGLVPW
Trigger: CCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCG...CCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR TCA 90 bp GGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTATAGTCCTGCCGGTGTaGGAGGGGGCCCACATCCCC +
Preference number: 4 (lower is better)
Translates to: GEADSTAVPIWTMGQGRSIVLPV*EGAHIP
Trigger: GGGGATGTGGGCCCCCTCTCACACCGGCAGGACTAT...AGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR TCA 90 bp ATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGATAGTCCTGCCGGTGTaGGAGGGGGCCCACATCCCC +
Preference number: 4 (lower is better)
Translates to: MGEADSTAVPIWTMGQGRIVLPV*EGAHIP
Trigger: GGGGATGTGGGCCCCCTCTCACACCGGCAGGACTAT...CCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR TCA 90 bp CTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGCAGTTGCCCTTAGCGTaGCAGTCAGAAACCGACCAT +
Preference number: 4 (lower is better)
Translates to: LSPAPRRHAFSWVGLVPWQLPLA*QSETDH
Trigger: ATGGTCGGTTTCTGACTGTCACGCTAAGGGCAACTG...CCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR GCA 90 bp TCATCACCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGGTGTGCAGGGCACTGTaGTGGGCGTTGAGGCGGGGG +
Preference number: 4 (lower is better)
Translates to: SSPLTFPCTPPPCLQLGGVCRAL*WALRRG
Trigger: CCCCCGCCTCAACGCCCAGCACAGTGCCCTGCACAC...CCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGGTGATGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR GCA 90 bp ATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCAGACTCCACCGGTAGGGAGGGGTTaGTGGAGGGGTGGCCCACGA +
Preference number: 4 (lower is better)
Translates to: MPSVGWAWCPGTWEKQTPPVGRG*WRGGPR
Trigger: TCGTGGGCCACCCCTCCAGCAACCCCTCCCTACCGG...TGGAGTCTGCTTCTCCCATGTACCAGGGCACCAGGCCCACCCAACTGAAGGCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR GCA 90 bp ATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCAGACTCCATACCAGGAGCTGCGGTaGAGGGACGGCAGGCTGCCG +
Preference number: 4 (lower is better)
Translates to: MPSVGWAWCPGTWEKQTPYQELR*RDGRLP
Trigger: CGGCAGCCTGCCGTCCCTGCACCGCAGCTCCTGGTA...TGGAGTCTGCTTCTCCCATGTACCAGGGCACCAGGCCCACCCAACTGAAGGCAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR GCA 90 bp GCGCCGAGGGGCCTGTCAGTCTTTGGGAGTTCGGGCAAACTAGGGATGCAGGACTCTGGACTGGGTCTCTaGAGAGAGCAGGGCCGGACG +
Preference number: 4 (lower is better)
Translates to: APRGLSVFGSSGKLGMQDSGLGL*REQGRT
Trigger: CGTCCGGCCCTGCTCTCTGCAGAGACCCAGTCCAGA...GTCCTGCATCCCTAGTTTGCCCGAACTCCCAAAGACTGACAGGCCCCTCGGCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CCA 90 bp CTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGGAGGTGCTCATAGTTTaGGCAGCCTTGGCCTGTCTA +
Preference number: 4 (lower is better)
Translates to: LSPAPRRHAFSWVGLVPWEVLIV*AALACL
Trigger: TAGACAGGCCAAGGCTGCCCAAACTATGAGCACCTC...CCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CCA 90 bp CTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGGGGCAGGTCGGCTGTTaGACGAGTTACCCTGTTTTT +
Preference number: 4 (lower is better)
Translates to: LSPAPRRHAFSWVGLVPWGQVGC*TSYPVF
Trigger: AAAAACAGGGTAACTCGTCCAACAGCCGACCTGCCC...CCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CCA 90 bp CTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGTTCCTCTTCCCCTACTaGCACATCGCAAGGCGGATA +
Preference number: 4 (lower is better)
Translates to: LSPAPRRHAFSWVGLVPWFLFPY*HIARRI
Trigger: TATCCGCCTTGCGATGTGCCAGTAGGGGAAGAGGAA...CCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CCA 90 bp AACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTTGGTTGATGAGCTTGTaGCAGCCTACGCGGATCGGG +
Preference number: 4 (lower is better)
Translates to: NFPLHPAAMPSVGWAWCPWLMSL*QPTRIG
Trigger: CCCGATCCGCGTAGGCTGCCACAAGCTCATCAACCA...AGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CCA 90 bp ATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCAGACTCCAAGGAGTGGCTGCGGATaGGGTCCTCTGCGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: MPSVGWAWCPGTWEKQTPRSGCG*GPLRPG
Trigger: CCCTGGCCGCAGAGGACCCCATCCGCAGCCACTCCT...TGGAGTCTGCTTCTCCCATGTACCAGGGCACCAGGCCCACCCAACTGAAGGCAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CCA 90 bp TACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCGACGGGACCTCTTCCTaGCTGCTCTGCCGGCGCAGG +
Preference number: 4 (lower is better)
Translates to: YMGEADSTAVPIWTMGQGDGTSS*LLCRRR
Trigger: CCTGCGCCGGCAGAGCAGCCAGGAAGAGGTCCCGTC...GCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CCA 90 bp AGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTGGGGCAGGGCCGTGCGATaGGGGAAGATGGGAGACGAC +
Preference number: 4 (lower is better)
Translates to: RSRLHSSAHLDNGAGQVWGRAVR*GKMGDD
Trigger: GTCGTCTCCCATCTTCCCCCATCGCACGGCCCTGCC...CCAGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CCA 90 bp AACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTATGCCTTCAGTTGGGTaGGCCTGGTGCCCTGGTACA +
Preference number: 4 (lower is better)
Translates to: NFPLHPAAMPSVGWAWCPMPSVG*AWCPGT
Trigger: TGTACCAGGGCACCAGGCCCACCCAACTGAAGGCAT...AGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CCA 90 bp GGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTCGCCATGCCTTCAGTTaGGTGGGCCTGGTGCCCTGG +
Preference number: 4 (lower is better)
Translates to: GEADSTAVPIWTMGQGRSRHAFS*VGLVPW
Trigger: CCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCG...AGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CCA 90 bp GCTCCGCAGATGAGCCACGGCCCCGCTTCCACCTTCCGGAGGAGTGCTTTGCTTGAGGAGTGCTTTGCTTaGAAGGGGTCTCCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: APQMSHGPASTFRRSALLEECFA*KGSPWG
Trigger: GCCCCAGGGAGACCCCTTCCAAGCAAAGCACTCCTC...AAGCAAAGCACTCCTCCGGAAGGTGGAAGCGGGGCCGTGGCTCATCTGCGGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR TCA 90 bp GCTCCGCAGATGAGCCACGGCCCCGCTTCCACCTTCCGGAGGAGTGCTTTGCTTGATTTTGAGATGGCTTaGCCCCACCGCCGACACCCA +
Preference number: 4 (lower is better)
Translates to: APQMSHGPASTFRRSALLDFEMA*PHRRHP
Trigger: TGGGTGTCGGCGGTGGGGTCAAGCCATCTCAAAATC...AAGCAAAGCACTCCTCCGGAAGGTGGAAGCGGGGCCGTGGCTCATCTGCGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000640483.1
CDS-3UTR TCA 90 bp CGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCAGCAGGCACTCAAAGTTaGAGGAGGATCTCCGGTGGG +
Preference number: 4 (lower is better)
Translates to: RRHAFSWVGLVPWYMGEAAGTQS*RRISGG
Trigger: CCCACCGGAGATCCTCCTTCAACTTTGAGTGCCTGC...TGCTTCTCCCATGTACCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR TCA 90 bp CCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCAGACTGGTCCAGGGCCTCTaGCTGCTCCACTTGGATCAG +
Preference number: 4 (lower is better)
Translates to: PPCLQLGGPGALVHGRSRLVQGL*LLHLDQ
Trigger: CTGATCCAAGTGGAGCAGTCAGAGGCCCTGGACCAG...TCTGCTTCTCCCATGTACCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR TCA 90 bp AACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTTCAGGCTGGCTGGTGTaGAAGTCCGGTAGGAGATGT +
Preference number: 4 (lower is better)
Translates to: NFPLHPAAMPSVGWAWCPSGWLV*KSGRRC
Trigger: ACATCTCCTACCGGACTTTCACACCAGCCAGCCTGA...AGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR TCA 90 bp ACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAATAGTCCTGCCGGTGTaGGAGGGGGCCCACATCCCC +
Preference number: 4 (lower is better)
Translates to: TWEKQTPQQCPSGQWGRAIVLPV*EGAHIP
Trigger: GGGGATGTGGGCCCCCTCTCACACCGGCAGGACTAT...TGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR TCA 90 bp CCTGGTACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCATAGTCCTGCCGGTGTaGGAGGGGGCCCACATCCCC +
Preference number: 4 (lower is better)
Translates to: PGTWEKQTPQQCPSGQWGIVLPV*EGAHIP
Trigger: GGGGATGTGGGCCCCCTCTCACACCGGCAGGACTAT...GCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTACCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR TCA 90 bp CCTCCTCACCCATCCTCTGTGAGAGGGCGGGGCCTGCTGTTTCCTGCAGCTGGGGTTGGGCCCAGTGACTaGTATGCTAGACCGATGGCT +
Preference number: 4 (lower is better)
Translates to: PPHPSSVRGRGLLFPAAGVGPSD*YARPMA
Trigger: AGCCATCGGTCTAGCATATCAGTCACTGGGCCCAAC...CCCAGCTGCAGGAAACAGCAGGCCCCGCCCTCTCACAGAGGATGGGTGAGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR TCA 90 bp AACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGCTCTCACTGGCAAATaGCAGCTCTGTGCAAGGAGC +
Preference number: 4 (lower is better)
Translates to: NFPLHPAAMPSVGWAWCPALTGK*QLCARS
Trigger: GCTCCTTGCACAGAGCTGTCATTTGCCAGTGAGAGC...AGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR GCA 90 bp CCTTCCGGAGGAGTGCTTTGCTTGGAAGGGGTCTCCCTGGGGCCTTGGGTCTGCCCAGGCCTCACCTGTTaGACACCTGAAGAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: PSGGVLCLEGVSLGPWVCPGLTC*TPEEQQ
Trigger: CTGCTGCTCTTCAGGTGTGCAACAGGTGAGGCCTGG...GCAGACCCAAGGCCCCAGGGAGACCCCTTCCAAGCAAAGCACTCCTCCGGAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR GCA 90 bp CGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCAGCTCAAGGTTCCCAATaGTGGGCCGCTTTCCATGGG +
Preference number: 4 (lower is better)
Translates to: RRHAFSWVGLVPWYMGEAAQGSQ*WAAFHG
Trigger: CCCATGGAAAGCGGCCCAGCATTGGGAACCTTGAGC...TGCTTCTCCCATGTACCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR GCA 90 bp CTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGGCCATGATCTGTTGCTaGATTAGATGCAGAGGCAGG +
Preference number: 4 (lower is better)
Translates to: LSPAPRRHAFSWVGLVPWAMICC*IRCRGR
Trigger: CCTGCCTCTGCATCTAATGCAGCAACAGATCATGGC...CCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR GCA 90 bp CCTGGTACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCCTGTGTACCAGGAGCTaGGGTGCAGGGACGGCAGGC +
Preference number: 4 (lower is better)
Translates to: PGTWEKQTPQQCPSGQWGLCTRS*GAGTAG
Trigger: GCCTGCCGTCCCTGCACCGCAGCTCCTGGTACACAG...GCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTACCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR GCA 90 bp CTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGCTGTCCGCACTCCTCTaGTTGTCGCTGTTTTTGTTC +
Preference number: 4 (lower is better)
Translates to: LSPAPRRHAFSWVGLVPWLSALL*LSLFLF
Trigger: GAACAAAAACAGCGACAAGCAGAGGAGTGCGGACAG...CCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR GCA 90 bp AACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTAAGCAGGGTGCTGGCTaGACTCTCCATCTCGTCGAT +
Preference number: 4 (lower is better)
Translates to: NFPLHPAAMPSVGWAWCPKQGAG*TLHLVD
Trigger: ATCGACGAGATGGAGAGTGCAGCCAGCACCCTGCTT...AGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR GCA 90 bp TACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGCCAGAGCCAGTCTaGCCCTCGCTGGGGGCTACA +
Preference number: 4 (lower is better)
Translates to: YMGEADSTAVPIWTMGQGRPEPV*PSLGAT
Trigger: TGTAGCCCCCAGCGAGGGGCAGACTGGCTCTGGCCT...GCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR GCA 90 bp TCATCACCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGAGGCCAGAGCCAGTCTaGCCCTCGCTGGGGGCTACA +
Preference number: 4 (lower is better)
Translates to: SSPLTFPCTPPPCLQLGGRPEPV*PSLGAT
Trigger: TGTAGCCCCCAGCGAGGGGCAGACTGGCTCTGGCCT...CCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGGTGATGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR GCA 90 bp ACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGGCCTGCTGTTTCCTaGAGCTGGGGCCGAGCGCAT +
Preference number: 4 (lower is better)
Translates to: TWEKQTPQQCPSGQWGRAGPAVS*SWGRAH
Trigger: ATGCGCTCGGCCCCAGCTGCAGGAAACAGCAGGCCC...TGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR GCA 90 bp GCTCCGCAGATGAGCCACGGCCCCGCTTCCACCTTCCGGAGGAGTGCTTTGCTTTCCGGAGGAGTGCTTTaGTTGGAAGGGGTCTCCCTG +
Preference number: 4 (lower is better)
Translates to: APQMSHGPASTFRRSALLSGGVL*LEGVSL
Trigger: CAGGGAGACCCCTTCCAAGCAAAGCACTCCTCCGGA...AAGCAAAGCACTCCTCCGGAAGGTGGAAGCGGGGCCGTGGCTCATCTGCGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR GCA 90 bp GCGCCGAGGGGCCTGTCAGTCTTTGGGAGTTCGGGCAAACTAGGGATGCAGGACTCTCTGTGGGGCAGCTaGCCCCCTCCTTTGCTCTCT +
Preference number: 4 (lower is better)
Translates to: APRGLSVFGSSGKLGMQDSLWGS*PPPLLS
Trigger: AGAGAGCAAAGGAGGGGGGCAGCTGCCCCACAGAGA...GTCCTGCATCCCTAGTTTGCCCGAACTCCCAAAGACTGACAGGCCCCTCGGCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CCA 90 bp ATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGGAGGCGGGGGCGGAATaGGGAAGGGGATCACCAAGA +
Preference number: 4 (lower is better)
Translates to: MGEADSTAVPIWTMGQGREAGAE*GRGSPR
Trigger: TCTTGGTGATCCCCTTCCCCATTCCGCCCCCGCCTC...CCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR CCA 90 bp GCGCCGAGGGGCCTGTCAGTCTTTGGGAGTTCGGGCAAACTAGGGATGCAGGACTTTGCCTCGTTCGCGTaGTCCGCTTGCTGCTGCCGT +
Preference number: 4 (lower is better)
Translates to: APRGLSVFGSSGKLGMQDFASFA*SACCCR
Trigger: ACGGCAGCAGCAAGCGGACCACGCGAACGAGGCAAA...GTCCTGCATCCCTAGTTTGCCCGAACTCCCAAAGACTGACAGGCCCCTCGGCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR CCA 90 bp CCTCCTCACCCATCCTCTGTGAGAGGGCGGGGCCTGCTGTTTCCTGCAGCTGGGGTCACAGAGCTTCCCTaGGAGACAGGCCAGCATGAT +
Preference number: 4 (lower is better)
Translates to: PPHPSSVRGRGLLFPAAGVTELP*ETGQHD
Trigger: ATCATGCTGGCCTGTCTCCCAGGGAAGCTCTGTGAC...CCCAGCTGCAGGAAACAGCAGGCCCCGCCCTCTCACAGAGGATGGGTGAGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CCA 90 bp CTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGCCTGTAGGGCAATTGTaGTGTTCTTCGCAGGGTACT +
Preference number: 4 (lower is better)
Translates to: LSPAPRRHAFSWVGLVPWPVGQL*CSSQGT
Trigger: AGTACCCTGCGAAGAACACCACAATTGCCCTACAGG...CCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CCA 90 bp GAGCTGCGGTGCAGGGACGGCAGGCTGCCGTTCACCTGGTCCAGGGCCTCTGACCCTGTAGGGCAATTGTaGTGTTCTTCGCAGGGTACT +
Preference number: 4 (lower is better)
Translates to: ELRCRDGRLPFTWSRASDPVGQL*CSSQGT
Trigger: AGTACCCTGCGAAGAACACCACAATTGCCCTACAGG...GTCAGAGGCCCTGGACCAGGTGAACGGCAGCCTGCCGTCCCTGCACCGCAGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636448.1
CDS-3UTR CCA 90 bp CCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTAAGGAGGATCTCCGGTaGGATGCTGGGGTGGGAGGT +
Preference number: 4 (lower is better)
Translates to: PLTFPCTPPPCLQLGGPGKEDLR*DAGVGG
Trigger: ACCTCCCACCCCAGCATCCCACCGGAGATCCTCCTT...ACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CCA 90 bp CGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCATGCGATGGGGGAAGATaGGAGACGACGGGACCTCTT +
Preference number: 4 (lower is better)
Translates to: RRHAFSWVGLVPWYMGEACDGGR*ETTGPL
Trigger: AAGAGGTCCCGTCGTCTCCCATCTTCCCCCATCGCA...TGCTTCTCCCATGTACCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CCA 90 bp CCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTTGTTCCGGAAGCTGCTaGGGACAGTCAGGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: PLTFPCTPPPCLQLGGPGCSGSC*GQSGWL
Trigger: CAGCCAGCCTGACTGTCCCCAGCAGCTTCCGGAACA...ACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CCA 90 bp AGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTGGCTGGGGCCGAGCGCATaGTACTCTGCCAGGCTCAAC +
Preference number: 4 (lower is better)
Translates to: RSRLHSSAHLDNGAGQVWLGPSA*YSARLN
Trigger: GTTGAGCCTGGCAGAGTACCATGCGCTCGGCCCCAG...CCAGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CCA 90 bp ACCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGGCTGTTTCCTGCAGCTaGGGCCGAGCGCATGGTACT +
Preference number: 4 (lower is better)
Translates to: TFNFPLHPAAMPSVGWAWAVSCS*GRAHGT
Trigger: AGTACCATGCGCTCGGCCCCAGCTGCAGGAAACAGC...CCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CCA 90 bp ATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTGCCCATCTGGACAATaGGGCAGGGCAGGTCTGGCC +
Preference number: 4 (lower is better)
Translates to: MGEADSTAVPIWTMGQGRCPSGQ*GRAGLA
Trigger: GGCCAGACCTGCCCTGCCCCATTGTCCAGATGGGCA...CCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CCA 90 bp CCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTACAGCAGTGCCCATCTaGACAATGGGGCAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: PLTFPCTPPPCLQLGGPGTAVPI*TMGQGR
Trigger: CCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGT...ACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CCA 90 bp CCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTTCAGTTGGGTGGGCCTaGTGCCCTGGTACATGGGAG +
Preference number: 4 (lower is better)
Translates to: PLTFPCTPPPCLQLGGPGSVGWA*CPGTWE
Trigger: CTCCCATGTACCAGGGCACCAGGCCCACCCAACTGA...ACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CCA 90 bp GGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCAGACTCCACAGCAGTGCCCATTCAGTTGGGTGGGCCTaGTGCCCTGGTACATGGGAG +
Preference number: 4 (lower is better)
Translates to: GGPGALVHGRSRLHSSAHSVGWA*CPGTWE
Trigger: CTCCCATGTACCAGGGCACCAGGCCCACCCAACTGA...ATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTACCAGGGCACCAGGCCCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CCA 90 bp ACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCACGCCATGCCTTCAGTTaGGTGGGCCTGGTGCCCTGG +
Preference number: 4 (lower is better)
Translates to: TWEKQTPQQCPSGQWGRARHAFS*VGLVPW
Trigger: CCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCG...TGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CCA 90 bp CCTCCTCACCCATCCTCTGTGAGAGGGCGGGGCCTGCTGTTTCCTGCAGCTGGGGGCAGAGCAGCCAGCTaGACCTGCTCTGTAATTCAC +
Preference number: 4 (lower is better)
Translates to: PPHPSSVRGRGLLFPAAGGRAAS*TCSVIH
Trigger: GTGAATTACAGAGCAGGTCCAGCTGGCTGCTCTGCC...CCCAGCTGCAGGAAACAGCAGGCCCCGCCCTCTCACAGAGGATGGGTGAGGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR CCA 90 bp CCTTCCGGAGGAGTGCTTTGCTTGGAAGGGGTCTCCCTGGGGCCTTGGGTCTGCTGGAAGGGGTCTCCCTaGGGCCTTGGGTCTGCTTTT +
Preference number: 4 (lower is better)
Translates to: PSGGVLCLEGVSLGPWVCWKGSP*GLGSAF
Trigger: AAAAGCAGACCCAAGGCCCCAGGGAGACCCCTTCCA...GCAGACCCAAGGCCCCAGGGAGACCCCTTCCAAGCAAAGCACTCCTCCGGAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CCA 90 bp TCCACCTTCCGGAGGAGTGCTTTGCTTGGAAGGGGTCTCCCTGGGGCCTTGGGTGAGGAGTGCTTTGCTTaGAAGGGGTCTCCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: STFRRSALLGRGLPGALGEECFA*KGSPWG
Trigger: GCCCCAGGGAGACCCCTTCCAAGCAAAGCACTCCTC...ACCCAAGGCCCCAGGGAGACCCCTTCCAAGCAAAGCACTCCTCCGGAAGGTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
3UTR CAA 72 bp TTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTaGGGTGGGCCTGGTGCCCTGGTACATGGGAGAAGC +
Preference number: 4 (lower is better)
Translates to: LTFPCTPPPCLQ*GGPGALVHGRS
Trigger: GCTTCTCCCATGTACCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
3UTR CAA 72 bp TCTTCCTGGCTGCTCTGCCGGCGCAGGCACTCAAAGTaGAAGGAGGATCTCCGGTGGGATGCTGGGGTGGGA +
Preference number: 4 (lower is better)
Translates to: SSWLLCRRRHSK*KEDLRWDAGVG
Trigger: TCCCACCCCAGCATCCCACCGGAGATCCTCCTTCAACTTTGAGTGCCTGCGCCGGCAGAGCAGCCAGGAAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636448.1
CDS-3UTR TCA 90 bp CCTCCTCACCCATCCTCTGTGAGAGGGCGGGGCCTGCTGTTTCCTGCAGCTGGGTACATCTTCTGCGATTaGATCGGTTCCAGCGACGCC +
Preference number: 4 (lower is better)
Translates to: PPHPSSVRGRGLLFPAAGYIFCD*IGSSDA
Trigger: GGCGTCGCTGGAACCGATTCAATCGCAGAAGATGTA...CCCAGCTGCAGGAAACAGCAGGCCCCGCCCTCTCACAGAGGATGGGTGAGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR TCA 90 bp AACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTTACATCTTCTGCGATTaGATCGGTTCCAGCGACGCC +
Preference number: 4 (lower is better)
Translates to: NFPLHPAAMPSVGWAWCPYIFCD*IGSSDA
Trigger: GGCGTCGCTGGAACCGATTCAATCGCAGAAGATGTA...AGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR TCA 90 bp GCGCCGAGGGGCCTGTCAGTCTTTGGGAGTTCGGGCAAACTAGGGATGCAGGACGGCCCCCGTAAGCCATaGTGCCATCGTACATCACAG +
Preference number: 4 (lower is better)
Translates to: APRGLSVFGSSGKLGMQDGPRKP*CHRTSQ
Trigger: CTGTGATGTACGATGGCATCATGGCTTACGGGGGCC...GTCCTGCATCCCTAGTTTGCCCGAACTCCCAAAGACTGACAGGCCCCTCGGCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR TCA 90 bp GCGCCGAGGGGCCTGTCAGTCTTTGGGAGTTCGGGCAAACTAGGGATGCAGGACGCAGACGATCATTCCTaGAGAGGATGGGCCCCCGTA +
Preference number: 4 (lower is better)
Translates to: APRGLSVFGSSGKLGMQDADDHS*RGWAPV
Trigger: TACGGGGGCCCATCCTCTTCAGGAATGATCGTCTGC...GTCCTGCATCCCTAGTTTGCCCGAACTCCCAAAGACTGACAGGCCCCTCGGCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR TCA 90 bp CCTCCTCACCCATCCTCTGTGAGAGGGCGGGGCCTGCTGTTTCCTGCAGCTGGGTGCTGCCGATTACGATaGGGGAGTCAAACGTGTTCC +
Preference number: 4 (lower is better)
Translates to: PPHPSSVRGRGLLFPAAGCCRLR*GSQTCS
Trigger: GGAACACGTTTGACTCCCTCATCGTAATCGGCAGCA...CCCAGCTGCAGGAAACAGCAGGCCCCGCCCTCTCACAGAGGATGGGTGAGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR TCA 90 bp CGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCACCCGGGGTTGTAATCTaGCTCAGGGTCACAGAGCTT +
Preference number: 4 (lower is better)
Translates to: RRHAFSWVGLVPWYMGEAPGVVI*LRVTEL
Trigger: AAGCTCTGTGACCCTGAGTCAGATTACAACCCCGGG...TGCTTCTCCCATGTACCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR TCA 90 bp CCTTCCGGAGGAGTGCTTTGCTTGGAAGGGGTCTCCCTGGGGCCTTGGGTCTGCCCCGGGGTTGTAATCTaGCTCAGGGTCACAGAGCTT +
Preference number: 4 (lower is better)
Translates to: PSGGVLCLEGVSLGPWVCPGVVI*LRVTEL
Trigger: AAGCTCTGTGACCCTGAGTCAGATTACAACCCCGGG...GCAGACCCAAGGCCCCAGGGAGACCCCTTCCAAGCAAAGCACTCCTCCGGAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR TCA 90 bp CTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGGAGCTGTTCATCTCCTaGGTCGGACCTAATGTAAGT +
Preference number: 4 (lower is better)
Translates to: LSPAPRRHAFSWVGLVPWELFIS*VGPNVS
Trigger: ACTTACATTAGGTCCGACTCAGGAGATGAACAGCTC...CCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR TCA 90 bp AACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTCCTTGGAGATCTCCGTaGATCATAGCAAACGGGCGA +
Preference number: 4 (lower is better)
Translates to: NFPLHPAAMPSVGWAWCPPWRSP*IIANGR
Trigger: TCGCCCGTTTGCTATGATTCACGGAGATCTCCAAGG...AGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR TCA 90 bp GAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTGCACGACCGGGTCGAGTaGCTCGGTGAGTACTTCTGG +
Preference number: 4 (lower is better)
Translates to: EKQTPQQCPSGQWGRAGLHDRVE*LGEYFW
Trigger: CCAGAAGTACTCACCGAGTCACTCGACCCGGTCGTG...CAGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR TCA 90 bp ACCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGCCATCTCGTCGATGGTaGGGTCACAGGCATCAGCGA +
Preference number: 4 (lower is better)
Translates to: TFNFPLHPAAMPSVGWAWPSRRW*GHRHQR
Trigger: TCGCTGATGCCTGTGACCTCACCATCGACGAGATGG...CCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR TCA 90 bp CCTCCTCACCCATCCTCTGTGAGAGGGCGGGGCCTGCTGTTTCCTGCAGCTGGGCTGGCAATTTTGGCCTaGTGTGATGCCACAAGACCC +
Preference number: 4 (lower is better)
Translates to: PPHPSSVRGRGLLFPAAGLAILA*CDATRP
Trigger: GGGTCTTGTGGCATCACATCAGGCCAAAATTGCCAG...CCCAGCTGCAGGAAACAGCAGGCCCCGCCCTCTCACAGAGGATGGGTGAGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR GCA 90 bp AACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTTCCTACAGGTGGGGGTaGAGAGGTGCTCATAGTTTG +
Preference number: 4 (lower is better)
Translates to: NFPLHPAAMPSVGWAWCPSYRWG*RGAHSL
Trigger: CAAACTATGAGCACCTCTGCACCCCCACCTGTAGGA...AGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR GCA 90 bp AACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTAGGATGCCACTAAGTTaGTCAGGGAAGTCCAGTGCC +
Preference number: 4 (lower is better)
Translates to: NFPLHPAAMPSVGWAWCPRMPLS*SGKSSA
Trigger: GGCACTGGACTTCCCTGAGCAACTTAGTGGCATCCT...AGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR GCA 90 bp CCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCAGACCAGGCCTCACCTGTTaGACACCTGAAGAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: PPCLQLGGPGALVHGRSRPGLTC*TPEEQQ
Trigger: CTGCTGCTCTTCAGGTGTGCAACAGGTGAGGCCTGG...TCTGCTTCTCCCATGTACCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR GCA 90 bp CTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGAGTTCTTCATTAGCTTaGTCCAGGTTCCCTTCGGTC +
Preference number: 4 (lower is better)
Translates to: LSPAPRRHAFSWVGLVPWSSSLA*SRFPSV
Trigger: GACCGAAGGGAACCTGGAGCAAGCTAATGAAGAACT...CCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR GCA 90 bp AGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTGGGTTGGGTGGGCCTGGTaGCCTGGTACATGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: RSRLHSSAHLDNGAGQVWVGWAW*PGTWEK
Trigger: CTTCTCCCATGTACCAGGGCACCAGGCCCACCCAAC...CCAGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR GCA 90 bp GAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTGGTTGGGTGGGCCTGGTaGCCTGGTACATGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: EKQTPQQCPSGQWGRAGLVGWAW*PGTWEK
Trigger: CTTCTCCCATGTACCAGGGCACCAGGCCCACCCAAC...CAGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR GCA 90 bp ACCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGCCTTTAACTTTCCCCTaGACCCCGCCGCCATGCCTT +
Preference number: 4 (lower is better)
Translates to: TFNFPLHPAAMPSVGWAWPLTFP*TPPPCL
Trigger: AAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGG...CCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CCA 90 bp ACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGAGGCGGGGGCGGAATaGGGAAGGGGATCACCAAGA +
Preference number: 4 (lower is better)
Translates to: TWEKQTPQQCPSGQWGRAEAGAE*GRGSPR
Trigger: TCTTGGTGATCCCCTTCCCCATTCCGCCCCCGCCTC...TGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR CCA 90 bp ATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTTTGCCTCGTTCGCGTaGTCCGCTTGCTGCTGCCGT +
Preference number: 4 (lower is better)
Translates to: MGEADSTAVPIWTMGQGRFASFA*SACCCR
Trigger: ACGGCAGCAGCAAGCGGACCACGCGAACGAGGCAAA...CCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CCA 90 bp GGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTTTTGCCTCGTTCGCGTaGTCCGCTTGCTGCTGCCGT +
Preference number: 4 (lower is better)
Translates to: GEADSTAVPIWTMGQGRSFASFA*SACCCR
Trigger: ACGGCAGCAGCAAGCGGACCACGCGAACGAGGCAAA...AGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CCA 90 bp AACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGAACGCACATGGAGCTaGGTCCTCTTCAGCTACGAT +
Preference number: 4 (lower is better)
Translates to: NFPLHPAAMPSVGWAWCPERTWS*VLFSYD
Trigger: ATCGTAGCTGAAGAGGACCCAGCTCCATGTGCGTTC...AGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CCA 90 bp AACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTCCATTGGCAGTACACTaGCGTCCATTCCCTGAGAAC +
Preference number: 4 (lower is better)
Translates to: NFPLHPAAMPSVGWAWCPPLAVH*RPFPEN
Trigger: GTTCTCAGGGAATGGACGCCAGTGTACTGCCAATGG...AGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CCA 90 bp CTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGCTCCATTCGAGTCGATaGCTTTATACAGCAACGCAG +
Preference number: 4 (lower is better)
Translates to: LSPAPRRHAFSWVGLVPWLHSSR*LYTATQ
Trigger: CTGCGTTGCTGTATAAAGCCATCGACTCGAATGGAG...CCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CCA 90 bp CCTTCCGGAGGAGTGCTTTGCTTGGAAGGGGTCTCCCTGGGGCCTTGGGTCTGCGTCACAGAGCTTCCCTaGGAGACAGGCCAGCATGAT +
Preference number: 4 (lower is better)
Translates to: PSGGVLCLEGVSLGPWVCVTELP*ETGQHD
Trigger: ATCATGCTGGCCTGTCTCCCAGGGAAGCTCTGTGAC...GCAGACCCAAGGCCCCAGGGAGACCCCTTCCAAGCAAAGCACTCCTCCGGAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CCA 90 bp GAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTGAACCCCAGGGGAGGCTaGATGCGTCGAAGCAGAGTG +
Preference number: 4 (lower is better)
Translates to: EKQTPQQCPSGQWGRAGLNPRGG*MRRSRV
Trigger: CACTCTGCTTCGACGCATCCAGCCTCCCCTGGGGTT...CAGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CCA 90 bp AGCGCCGAGGGGCCTGTCAGTCTTTGGGAGTTCGGGCAAACTAGGGATGCAGGAAACCCCAGGGGAGGCTaGATGCGTCGAAGCAGAGTG +
Preference number: 4 (lower is better)
Translates to: SAEGPVSLWEFGQTRDAGNPRGG*MRRSRV
Trigger: CACTCTGCTTCGACGCATCCAGCCTCCCCTGGGGTT...TCCTGCATCCCTAGTTTGCCCGAACTCCCAAAGACTGACAGGCCCCTCGGCGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CCA 90 bp TACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCGGTGGGATGCTGGGGTaGGAGGTAGTAGGCGTCTCC +
Preference number: 4 (lower is better)
Translates to: YMGEADSTAVPIWTMGQGGGMLG*EVVGVS
Trigger: GGAGACGCCTACTACCTCCCACCCCAGCATCCCACC...GCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CCA 90 bp TACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGCTGCCGTTCACCTaGTCCAGGGCCTCTGACTGC +
Preference number: 4 (lower is better)
Translates to: YMGEADSTAVPIWTMGQGRLPFT*SRASDC
Trigger: GCAGTCAGAGGCCCTGGACCAGGTGAACGGCAGCCT...GCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CCA 90 bp GAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTGCAGTCTGCCCCTCGCTaGGGGCTACAAGGTGGTGAT +
Preference number: 4 (lower is better)
Translates to: EKQTPQQCPSGQWGRAGLQSAPR*GLQGGD
Trigger: ATCACCACCTTGTAGCCCCCAGCGAGGGGCAGACTG...CAGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CCA 90 bp CGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCACGGACCTTTTCACACTaGACCTTCTCTGAGGCTCCC +
Preference number: 4 (lower is better)
Translates to: RRHAFSWVGLVPWYMGEARTFSH*TFSEAP
Trigger: GGGAGCCTCAGAGAAGGTCCAGTGTGAAAAGGTCCG...TGCTTCTCCCATGTACCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422281.7
CDS-3UTR TCA 90 bp GGAGGTCATGGCGGACTGGCATACAAAAGGAACTCTGTCAGCTCAGCGCCGAGGCTGGCGTCCATTCCCTaGGAACGCACATGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: GGHGGLAYKRNSVSSAPRLASIP*ERTWSW
Trigger: CCAGCTCCATGTGCGTTCTCAGGGAATGGACGCCAG...CCTCGGCGCTGAGCTGACAGAGTTCCTTTTGTATGCCAGTCCGCCATGACCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR TCA 90 bp ACCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTCTCGCCTTCACCGCTaGCGTTCTCTGTGTTCACAG +
Preference number: 4 (lower is better)
Translates to: TFNFPLHPAAMPSVGWAWSRLHR*RSLCSQ
Trigger: CTGTGAACACAGAGAACGTCAGCGGTGAAGGCGAGA...CCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR TCA 90 bp GCTCCGCAGATGAGCCACGGCCCCGCTTCCACCTTCCGGAGGAGTGCTTTGCTTTACATCTTCTGCGATTaGATCGGTTCCAGCGACGCC +
Preference number: 4 (lower is better)
Translates to: APQMSHGPASTFRRSALLYIFCD*IGSSDA
Trigger: GGCGTCGCTGGAACCGATTCAATCGCAGAAGATGTA...AAGCAAAGCACTCCTCCGGAAGGTGGAAGCGGGGCCGTGGCTCATCTGCGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR TCA 90 bp ATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCAGACTCCACCAGCCAGTAAAACGTaGCAGACTTCACGGCGGCCC +
Preference number: 4 (lower is better)
Translates to: MPSVGWAWCPGTWEKQTPPASKT*QTSRRP
Trigger: GGGCCGCCGTGAAGTCTGTCACGTTTTACTGGCTGG...TGGAGTCTGCTTCTCCCATGTACCAGGGCACCAGGCCCACCCAACTGAAGGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR TCA 90 bp TCCCTTTCACGAAAAAGAACCACCGTGAGCAACGTCCGCGACAGGCAGCCCTGGCCAGCCAGTAAAACGTaGCAGACTTCACGGCGGCCC +
Preference number: 4 (lower is better)
Translates to: SLSRKRTTVSNVRDRQPWPASKT*QTSRRP
Trigger: GGGCCGCCGTGAAGTCTGTCACGTTTTACTGGCTGG...CCAGGGCTGCCTGTCGCGGACGTTGCTCACGGTGGTTCTTTTTCGTGAAAGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR TCA 90 bp CGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCATCCCCAGGGGAGACATaGTTTCCAGTTCCACCAAGA +
Preference number: 4 (lower is better)
Translates to: RRHAFSWVGLVPWYMGEASPGET*FPVPPR
Trigger: TCTTGGTGGAACTGGAAATCATGTCTCCCCTGGGGA...TGCTTCTCCCATGTACCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR TCA 90 bp GGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTGCAGACGATCATTCCTaGAGAGGATGGGCCCCCGTA +
Preference number: 4 (lower is better)
Translates to: GEADSTAVPIWTMGQGRSADDHS*RGWAPV
Trigger: TACGGGGGCCCATCCTCTTCAGGAATGATCGTCTGC...AGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR TCA 90 bp CGGTGCAGGGACGGCAGGCTGCCGTTCACCTGGTCCAGGGCCTCTGACTGCTCCTGCTTGTGGGAAGAATaGTGCCCATTTTCAGACACA +
Preference number: 4 (lower is better)
Translates to: RCRDGRLPFTWSRASDCSCLWEE*CPFSDT
Trigger: TGTGTCTGAAAATGGGCATCATTCTTCCCACAAGCA...GGAGCAGTCAGAGGCCCTGGACCAGGTGAACGGCAGCCTGCCGTCCCTGCACCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636448.1
CDS-3UTR TCA 90 bp ACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCACTGGTCCAGGGCCTCTaGCTGCTCCACTTGGATCAG +
Preference number: 4 (lower is better)
Translates to: TWEKQTPQQCPSGQWGRALVQGL*LLHLDQ
Trigger: CTGATCCAAGTGGAGCAGTCAGAGGCCCTGGACCAG...TGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR TCA 90 bp CCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCAGAGTTGGGCCCAGTGACTaGTATGCTAGACCGATGGCT +
Preference number: 4 (lower is better)
Translates to: PPCLQLGGPGALVHGRSRVGPSD*YARPMA
Trigger: AGCCATCGGTCTAGCATATCAGTCACTGGGCCCAAC...TCTGCTTCTCCCATGTACCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR TCA 90 bp CCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGTTGGGCCCAGTGACTaGTATGCTAGACCGATGGCT +
Preference number: 4 (lower is better)
Translates to: PLTFPCTPPPCLQLGGPGVGPSD*YARPMA
Trigger: AGCCATCGGTCTAGCATATCAGTCACTGGGCCCAAC...ACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR TCA 90 bp CCTCCTCACCCATCCTCTGTGAGAGGGCGGGGCCTGCTGTTTCCTGCAGCTGGGGAGCTGTTCATCTCCTaGGTCGGACCTTTTCACACT +
Preference number: 4 (lower is better)
Translates to: PPHPSSVRGRGLLFPAAGELFIS*VGPFHT
Trigger: AGTGTGAAAAGGTCCGACTCAGGAGATGAACAGCTC...CCCAGCTGCAGGAAACAGCAGGCCCCGCCCTCTCACAGAGGATGGGTGAGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000422281.7
CDS-3UTR TCA 90 bp AGCGCCGAGGGGCCTGTCAGTCTTTGGGAGTTCGGGCAAACTAGGGATGCAGGAGAAAAAGAACCACCGTaGGCAACGTCCGCGACAGGC +
Preference number: 4 (lower is better)
Translates to: SAEGPVSLWEFGQTRDAGEKEPP*ATSATG
Trigger: GCCTGTCGCGGACGTTGCTCACGGTGGTTCTTTTTC...TCCTGCATCCCTAGTTTGCCCGAACTCCCAAAGACTGACAGGCCCCTCGGCGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR TCA 90 bp GCTCCGCAGATGAGCCACGGCCCCGCTTCCACCTTCCGGAGGAGTGCTTTGCTTAGAACCCAGGTTCCCTaGCTCCCAGTGTCCTTGAAA +
Preference number: 4 (lower is better)
Translates to: APQMSHGPASTFRRSALLRTQVP*LPVSLK
Trigger: TTTCAAGGACACTGGGAGTCAGGGAACCTGGGTTCT...AAGCAAAGCACTCCTCCGGAAGGTGGAAGCGGGGCCGTGGCTCATCTGCGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000645528.2
CDS-3UTR GCA 90 bp GCGCCGAGGGGCCTGTCAGTCTTTGGGAGTTCGGGCAAACTAGGGATGCAGGACCAAAGCCTCCAGATTTaGCGCTTGAGTGGTTCCCGC +
Preference number: 4 (lower is better)
Translates to: APRGLSVFGSSGKLGMQDQSLQI*RLSGSR
Trigger: GCGGGAACCACTCAAGCGGCAAATCTGGAGGCTTTG...GTCCTGCATCCCTAGTTTGCCCGAACTCCCAAAGACTGACAGGCCCCTCGGCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR GCA 90 bp CCTTCCGGAGGAGTGCTTTGCTTGGAAGGGGTCTCCCTGGGGCCTTGGGTCTGCAGGATGCCACTAAGTTaGTCAGGGAAGTCCAGTGCC +
Preference number: 4 (lower is better)
Translates to: PSGGVLCLEGVSLGPWVCRMPLS*SGKSSA
Trigger: GGCACTGGACTTCCCTGAGCAACTTAGTGGCATCCT...GCAGACCCAAGGCCCCAGGGAGACCCCTTCCAAGCAAAGCACTCCTCCGGAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR GCA 90 bp AACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTTTGCCGCCAAACAGCTaGATCCCAAGCAAGGAAAAG +
Preference number: 4 (lower is better)
Translates to: NFPLHPAAMPSVGWAWCPLPPNS*IPSKEK
Trigger: CTTTTCCTTGCTTGGGATGCAGCTGTTTGGCGGCAA...AGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR GCA 90 bp TCCACCTTCCGGAGGAGTGCTTTGCTTGGAAGGGGTCTCCCTGGGGCCTTGGGTACTTTCAGTTGGGTCTaGTTCGCTGAGGGCCACGTC +
Preference number: 4 (lower is better)
Translates to: STFRRSALLGRGLPGALGTFSWV*FAEGHV
Trigger: GACGTGGCCCTCAGCGAAGCAGACCCAACTGAAAGT...ACCCAAGGCCCCAGGGAGACCCCTTCCAAGCAAAGCACTCCTCCGGAAGGTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636938.1
CDS-3UTR GCA 90 bp GGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTACTGAAATACTCCTaGTCCCCCAAGCAGTGGGGG +
Preference number: 4 (lower is better)
Translates to: GGPGALVHGRSRLHSSAHLLKYS*SPKQWG
Trigger: CCCCCACTGCTTGGGGGAGCAGGAGTATTTCAGTAG...ATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTACCAGGGCACCAGGCCCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR GCA 90 bp CGACACTCCAATCCTATAGATCACCACGTTGCTCCTCTGTCCCCAGCACCCCTTGGACCTCTTCCTGGCTaGTCTGCCGGCGCAGGCACT +
Preference number: 4 (lower is better)
Translates to: RHSNPIDHHVAPLSPAPLGPLPG*SAGAGT
Trigger: AGTGCCTGCGCCGGCAGAGCAGCCAGGAAGAGGTCC...AAGGGGTGCTGGGGACAGAGGAGCAACGTGGTGATCTATAGGATTGGAGTGTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR GCA 90 bp GGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCAGACTCCACAGCAGTGCCCATTGTTGCTGCATTAGATaGAGAGGCAGGGCCGTGCGA +
Preference number: 4 (lower is better)
Translates to: GGPGALVHGRSRLHSSAHCCCIR*RGRAVR
Trigger: TCGCACGGCCCTGCCTCTGCATCTAATGCAGCAACA...ATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTACCAGGGCACCAGGCCCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR GCA 90 bp ACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCATCCAGGGCCTCTGACTaGTCCACTTGGATCAGGGGG +
Preference number: 4 (lower is better)
Translates to: TWEKQTPQQCPSGQWGRASRASD*STWIRG
Trigger: CCCCCTGATCCAAGTGGAGCAGTCAGAGGCCCTGGA...TGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR GCA 90 bp CCTGGTACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCGAGCGCATGGTACTCTaGCAGGCTCAACCGCTTGGG +
Preference number: 4 (lower is better)
Translates to: PGTWEKQTPQQCPSGQWGERMVL*QAQPLG
Trigger: CCCAAGCGGTTGAGCCTGGCAGAGTACCATGCGCTC...GCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTACCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR GCA 90 bp GGAGGTCATGGCGGACTGGCATACAAAAGGAACTCTGTCAGCTCAGCGCCGAGGTCTCTGTGGGGCAGCTaGCCCCCTCCTTTGCTCTCT +
Preference number: 4 (lower is better)
Translates to: GGHGGLAYKRNSVSSAPRSLWGS*PPPLLS
Trigger: AGAGAGCAAAGGAGGGGGGCAGCTGCCCCACAGAGA...CCTCGGCGCTGAGCTGACAGAGTTCCTTTTGTATGCCAGTCCGCCATGACCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CCA 90 bp GGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCAGACTCCACAGCAGTGCCCATGAGAGATCCTACAGGTaGGGGTGCAGAGGTGCTCAT +
Preference number: 4 (lower is better)
Translates to: GGPGALVHGRSRLHSSAHERSYR*GCRGAH
Trigger: ATGAGCACCTCTGCACCCCCACCTGTAGGATCTCTC...ATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTACCAGGGCACCAGGCCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CCA 90 bp GCAGATGAGCCACGGCCCCGCTTCCACCTTCCGGAGGAGTGCTTTGCTTGGAAGGAGAGATCCTACAGGTaGGGGTGCAGAGGTGCTCAT +
Preference number: 4 (lower is better)
Translates to: ADEPRPRFHLPEECFAWKERSYR*GCRGAH
Trigger: ATGAGCACCTCTGCACCCCCACCTGTAGGATCTCTC...CTTCCAAGCAAAGCACTCCTCCGGAAGGTGGAAGCGGGGCCGTGGCTCATCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR CCA 90 bp GCTCCGCAGATGAGCCACGGCCCCGCTTCCACCTTCCGGAGGAGTGCTTTGCTTGGGCAGGTCGGCTGTTaGACGAGTTACCCTGTTTTT +
Preference number: 4 (lower is better)
Translates to: APQMSHGPASTFRRSALLGQVGC*TSYPVF
Trigger: AAAAACAGGGTAACTCGTCCAACAGCCGACCTGCCC...AAGCAAAGCACTCCTCCGGAAGGTGGAAGCGGGGCCGTGGCTCATCTGCGGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR CCA 90 bp CGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCAGAACGCACATGGAGCTaGGTCCTCTTCAGCTACGAT +
Preference number: 4 (lower is better)
Translates to: RRHAFSWVGLVPWYMGEAERTWS*VLFSYD
Trigger: ATCGTAGCTGAAGAGGACCCAGCTCCATGTGCGTTC...TGCTTCTCCCATGTACCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CCA 90 bp CCTTCCGGAGGAGTGCTTTGCTTGGAAGGGGTCTCCCTGGGGCCTTGGGTCTGCGAACGCACATGGAGCTaGGTCCTCTTCAGCTACGAT +
Preference number: 4 (lower is better)
Translates to: PSGGVLCLEGVSLGPWVCERTWS*VLFSYD
Trigger: ATCGTAGCTGAAGAGGACCCAGCTCCATGTGCGTTC...GCAGACCCAAGGCCCCAGGGAGACCCCTTCCAAGCAAAGCACTCCTCCGGAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR CCA 90 bp CCTTCCGGAGGAGTGCTTTGCTTGGAAGGGGTCTCCCTGGGGCCTTGGGTCTGCTTCCTCTTCCCCTACTaGCACATCGCAAGGCGGATA +
Preference number: 4 (lower is better)
Translates to: PSGGVLCLEGVSLGPWVCFLFPY*HIARRI
Trigger: TATCCGCCTTGCGATGTGCCAGTAGGGGAAGAGGAA...GCAGACCCAAGGCCCCAGGGAGACCCCTTCCAAGCAAAGCACTCCTCCGGAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR CCA 90 bp GGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTTGGTTGATGAGCTTGTaGCAGCCTACGCGGATCGGG +
Preference number: 4 (lower is better)
Translates to: GEADSTAVPIWTMGQGRSWLMSL*QPTRIG
Trigger: CCCGATCCGCGTAGGCTGCCACAAGCTCATCAACCA...AGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CCA 90 bp AGCGCCGAGGGGCCTGTCAGTCTTTGGGAGTTCGGGCAAACTAGGGATGCAGGATGGTTGATGAGCTTGTaGCAGCCTACGCGGATCGGG +
Preference number: 4 (lower is better)
Translates to: SAEGPVSLWEFGQTRDAGWLMSL*QPTRIG
Trigger: CCCGATCCGCGTAGGCTGCCACAAGCTCATCAACCA...TCCTGCATCCCTAGTTTGCCCGAACTCCCAAAGACTGACAGGCCCCTCGGCGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR CCA 90 bp CTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGCTTCAGGGTTACTTTTaGCTTCATCCGTACAGCGAT +
Preference number: 4 (lower is better)
Translates to: LSPAPRRHAFSWVGLVPWLQGYF*LHPYSD
Trigger: ATCGCTGTACGGATGAAGCCAAAAGTAACCCTGAAG...CCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CCA 90 bp ATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTGCGATGGGGGAAGATaGGAGACGACGGGACCTCTT +
Preference number: 4 (lower is better)
Translates to: MGEADSTAVPIWTMGQGRCDGGR*ETTGPL
Trigger: AAGAGGTCCCGTCGTCTCCCATCTTCCCCCATCGCA...CCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CCA 90 bp CCTGGTACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCCAGTCTGCCCCTCGCTaGGGGCTACAAGGTGGTGAT +
Preference number: 4 (lower is better)
Translates to: PGTWEKQTPQQCPSGQWGQSAPR*GLQGGD
Trigger: ATCACCACCTTGTAGCCCCCAGCGAGGGGCAGACTG...GCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTACCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CCA 90 bp ACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCACAGTCTGCCCCTCGCTaGGGGCTACAAGGTGGTGAT +
Preference number: 4 (lower is better)
Translates to: TWEKQTPQQCPSGQWGRAQSAPR*GLQGGD
Trigger: ATCACCACCTTGTAGCCCCCAGCGAGGGGCAGACTG...TGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CCA 90 bp TACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCGCTGTTTCCTGCAGCTaGGGCCGAGCGCATGGTACT +
Preference number: 4 (lower is better)
Translates to: YMGEADSTAVPIWTMGQGAVSCS*GRAHGT
Trigger: AGTACCATGCGCTCGGCCCCAGCTGCAGGAAACAGC...GCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CCA 90 bp CTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGAGTTGCAACCCATGGTaGATCCAAAGGTACAGTATC +
Preference number: 4 (lower is better)
Translates to: LSPAPRRHAFSWVGLVPWSCNPW*IQRYSI
Trigger: GATACTGTACCTTTGGATCCACCATGGGTTGCAACT...CCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR CCA 90 bp CCTTCCGGAGGAGTGCTTTGCTTGGAAGGGGTCTCCCTGGGGCCTTGGGTCTGCGAGGTTTGGGTGTGGTaGTGTTTCCTGTGGACACGT +
Preference number: 4 (lower is better)
Translates to: PSGGVLCLEGVSLGPWVCEVWVW*CFLWTR
Trigger: ACGTGTCCACAGGAAACACCACCACACCCAAACCTC...GCAGACCCAAGGCCCCAGGGAGACCCCTTCCAAGCAAAGCACTCCTCCGGAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000645528.2
CDS-3UTR TCA 90 bp CCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTTGTCCTCAGCTTGGGTaGTCCAATCCAAGTAGCCCT +
Preference number: 4 (lower is better)
Translates to: PLTFPCTPPPCLQLGGPGCPQLG*SNPSSP
Trigger: AGGGCTACTTGGATTGGATCACCCAAGCTGAGGACA...ACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR TCA 90 bp AGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTGGTCTCGCCTTCACCGCTaGCGTTCTCTGTGTTCACAG +
Preference number: 4 (lower is better)
Translates to: RSRLHSSAHLDNGAGQVWSRLHR*RSLCSQ
Trigger: CTGTGAACACAGAGAACGTCAGCGGTGAAGGCGAGA...CCAGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR TCA 90 bp GCAGATGAGCCACGGCCCCGCTTCCACCTTCCGGAGGAGTGCTTTGCTTGGAAGGCTGAGTTTGGATTTTaGGATGGCTTGACCCCACCG +
Preference number: 4 (lower is better)
Translates to: ADEPRPRFHLPEECFAWKAEFGF*DGLTPP
Trigger: CGGTGGGGTCAAGCCATCTCAAAATCCAAACTCAGC...CTTCCAAGCAAAGCACTCCTCCGGAAGGTGGAAGCGGGGCCGTGGCTCATCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000640483.1
CDS-3UTR TCA 90 bp ATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCAGACTCCAGGCCCCCGTAAGCCATaGTGCCATCGTACATCACAG +
Preference number: 4 (lower is better)
Translates to: MPSVGWAWCPGTWEKQTPGPRKP*CHRTSQ
Trigger: CTGTGATGTACGATGGCATCATGGCTTACGGGGGCC...TGGAGTCTGCTTCTCCCATGTACCAGGGCACCAGGCCCACCCAACTGAAGGCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR TCA 90 bp ACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGCAGACGATCATTCCTaGAGAGGATGGGCCCCCGTA +
Preference number: 4 (lower is better)
Translates to: TWEKQTPQQCPSGQWGRAADDHS*RGWAPV
Trigger: TACGGGGGCCCATCCTCTTCAGGAATGATCGTCTGC...TGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR TCA 90 bp ACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAACACTGGACCTTCTCTaGGGCTCCCGGTCATGCTTG +
Preference number: 4 (lower is better)
Translates to: TWEKQTPQQCPSGQWGRATLDLL*GSRSCL
Trigger: CAAGCATGACCGGGAGCCTCAGAGAAGGTCCAGTGT...TGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR TCA 90 bp ACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGCAGGCACTCAAAGTTaGAGGAGGATCTCCGGTGGG +
Preference number: 4 (lower is better)
Translates to: TWEKQTPQQCPSGQWGRAAGTQS*RRISGG
Trigger: CCCACCGGAGATCCTCCTTCAACTTTGAGTGCCTGC...TGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR TCA 90 bp CTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGTTCGTGTTTTGTTGCTaGCACAAATTTTGGGTCCCT +
Preference number: 4 (lower is better)
Translates to: LSPAPRRHAFSWVGLVPWFVFCC*HKFWVP
Trigger: AGGGACCCAAAATTTGTGTCAGCAACAAAACACGAA...CCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR TCA 90 bp GAGCTGCGGTGCAGGGACGGCAGGCTGCCGTTCACCTGGTCCAGGGCCTCTGACTTCGTGTTTTGTTGCTaGCACAAATTTTGGGTCCCT +
Preference number: 4 (lower is better)
Translates to: ELRCRDGRLPFTWSRASDFVFCC*HKFWVP
Trigger: AGGGACCCAAAATTTGTGTCAGCAACAAAACACGAA...GTCAGAGGCCCTGGACCAGGTGAACGGCAGCCTGCCGTCCCTGCACCGCAGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636448.1
CDS-3UTR TCA 90 bp GGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCAGTTGCCCTTAGCGTaGCAGTCAGAAACCGACCAT +
Preference number: 4 (lower is better)
Translates to: GGPGALVHGRSRLHSSAHQLPLA*QSETDH
Trigger: ATGGTCGGTTTCTGACTGTCACGCTAAGGGCAACTG...ATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTACCAGGGCACCAGGCCCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR GCA 90 bp GAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTGCAAAGCCTCCAGATTTaGCGCTTGAGTGGTTCCCGC +
Preference number: 4 (lower is better)
Translates to: EKQTPQQCPSGQWGRAGLQSLQI*RLSGSR
Trigger: GCGGGAACCACTCAAGCGGCAAATCTGGAGGCTTTG...CAGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR GCA 90 bp GGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCACTCCTACATTCCGTaGCATTGGCAGTACACTGGC +
Preference number: 4 (lower is better)
Translates to: GGPGALVHGRSRLHSSAHHSYIP*HWQYTG
Trigger: GCCAGTGTACTGCCAATGGCACGGAATGTAGGAGTG...ATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTACCAGGGCACCAGGCCCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR GCA 90 bp AACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTCTCAGGGAAGTCCAGTaGCTGGTCACTTTGAAGATT +
Preference number: 4 (lower is better)
Translates to: NFPLHPAAMPSVGWAWCPLREVQ*LVTLKI
Trigger: AATCTTCAAAGTGACCAGGCACTGGACTTCCCTGAG...AGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR GCA 90 bp CCTGGTACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCCCAGGCCTCACCTGTTaGACACCTGAAGAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: PGTWEKQTPQQCPSGQWGPGLTC*TPEEQQ
Trigger: CTGCTGCTCTTCAGGTGTGCAACAGGTGAGGCCTGG...GCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTACCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR GCA 90 bp GGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCAGACTCCACAGCAGTGCCCATTCTGGCCCAATGTCATaGAGTGTCCTTAATCCCGCC +
Preference number: 4 (lower is better)
Translates to: GGPGALVHGRSRLHSSAHSGPMS*SVLNPA
Trigger: GGCGGGATTAAGGACACTGCATGACATTGGGCCAGA...ATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTACCAGGGCACCAGGCCCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR GCA 90 bp TACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCGAAGGCCTTTGGACATaGAGGGGACGGTGGGTGGTA +
Preference number: 4 (lower is better)
Translates to: YMGEADSTAVPIWTMGQGEGLWT*RGRWVV
Trigger: TACCACCCACCGTCCCCTGCATGTCCAAAGGCCTTC...GCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR GCA 90 bp TCATCACCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGGAAGGCCTTTGGACATaGAGGGGACGGTGGGTGGTA +
Preference number: 4 (lower is better)
Translates to: SSPLTFPCTPPPCLQLGGEGLWT*RGRWVV
Trigger: TACCACCCACCGTCCCCTGCATGTCCAAAGGCCTTC...CCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGGTGATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR GCA 90 bp AACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTACACACCGAATTTCCTaGTGGAGGAAACAGCGGTTT +
Preference number: 4 (lower is better)
Translates to: NFPLHPAAMPSVGWAWCPTHRIS*WRKQRF
Trigger: AAACCGCTGTTTCCTCCAGCAGGAAATTCGGTGTGT...AGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR GCA 90 bp GAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTGCTACTGAAATACTCCTaGTCCCCCAAGCAGTGGGGG +
Preference number: 4 (lower is better)
Translates to: EKQTPQQCPSGQWGRAGLLLKYS*SPKQWG
Trigger: CCCCCACTGCTTGGGGGAGCAGGAGTATTTCAGTAG...CAGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR GCA 90 bp CTCGTCTGTGTACCAGGAGCTGCGGTGCAGGGACGGCAGGCTGCCGTTCACCTGACTGCCATGATCTGTTaGTGCATTAGATGCAGAGGC +
Preference number: 4 (lower is better)
Translates to: LVCVPGAAVQGRQAAVHLTAMIC*CIRCRG
Trigger: GCCTCTGCATCTAATGCAGCAACAGATCATGGCAGT...CAGGTGAACGGCAGCCTGCCGTCCCTGCACCGCAGCTCCTGGTACACAGACGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636448.1
CDS-3UTR GCA 90 bp CAGACACTTAGGGTCCTGGTCTGGCAATTTTGGCCTGATGTGATGCCACAAGACCCGGTAGGGAGGGGTTaGTGGAGGGGTGGCCCACGA +
Preference number: 4 (lower is better)
Translates to: QTLRVLVWQFWPDVMPQDPVGRG*WRGGPR
Trigger: TCGTGGGCCACCCCTCCAGCAACCCCTCCCTACCGG...GTCTTGTGGCATCACATCAGGCCAAAATTGCCAGACCAGGACCCTAAGTGTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR GCA 90 bp CCTCCTCACCCATCCTCTGTGAGAGGGCGGGGCCTGCTGTTTCCTGCAGCTGGGAAATTTTGGGTCCCTTaGATAGCGTCCCAAGCCTTC +
Preference number: 4 (lower is better)
Translates to: PPHPSSVRGRGLLFPAAGKFWVP*IASQAF
Trigger: GAAGGCTTGGGACGCTATGCAAGGGACCCAAAATTT...CCCAGCTGCAGGAAACAGCAGGCCCCGCCCTCTCACAGAGGATGGGTGAGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR GCA 90 bp ACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCACCTTTAACTTTCCCCTaGACCCCGCCGCCATGCCTT +
Preference number: 4 (lower is better)
Translates to: TWEKQTPQQCPSGQWGRAPLTFP*TPPPCL
Trigger: AAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGG...TGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR GCA 90 bp GAGCTTCCTGGCCTGTCCACTTCTCACTGTATTCTGGACTGGGTCTCTGCAGAGTCTGGACTGGGTCTCTaGAGAGAGCAGGGCCGGACG +
Preference number: 4 (lower is better)
Translates to: ELPGLSTSHCILDWVSAESGLGL*REQGRT
Trigger: CGTCCGGCCCTGCTCTCTGCAGAGACCCAGTCCAGA...CTCTGCAGAGACCCAGTCCAGAATACAGTGAGAAGTGGACAGGCCAGGAAGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CCA 90 bp GCAGATGAGCCACGGCCCCGCTTCCACCTTCCGGAGGAGTGCTTTGCTTGGAAGGAGGTGCTCATAGTTTaGGCAGCCTTGGCCTGTCTA +
Preference number: 4 (lower is better)
Translates to: ADEPRPRFHLPEECFAWKEVLIV*AALACL
Trigger: TAGACAGGCCAAGGCTGCCCAAACTATGAGCACCTC...CTTCCAAGCAAAGCACTCCTCCGGAAGGTGGAAGCGGGGCCGTGGCTCATCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR CCA 90 bp GCAGATGAGCCACGGCCCCGCTTCCACCTTCCGGAGGAGTGCTTTGCTTGGAAGCCATTGGCAGTACACTaGCGTCCATTCCCTGAGAAC +
Preference number: 4 (lower is better)
Translates to: ADEPRPRFHLPEECFAWKPLAVH*RPFPEN
Trigger: GTTCTCAGGGAATGGACGCCAGTGTACTGCCAATGG...CTTCCAAGCAAAGCACTCCTCCGGAAGGTGGAAGCGGGGCCGTGGCTCATCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR CCA 90 bp CCTTCCGGAGGAGTGCTTTGCTTGGAAGGGGTCTCCCTGGGGCCTTGGGTCTGCTCGCCTGTCAGGATCTaGAACACTGTGAGAAGTGCT +
Preference number: 4 (lower is better)
Translates to: PSGGVLCLEGVSLGPWVCSPVRI*NTVRSA
Trigger: AGCACTTCTCACAGTGTTCCAGATCCTGACAGGCGA...GCAGACCCAAGGCCCCAGGGAGACCCCTTCCAAGCAAAGCACTCCTCCGGAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR CCA 90 bp TACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCTGGTTGATGAGCTTGTaGCAGCCTACGCGGATCGGG +
Preference number: 4 (lower is better)
Translates to: YMGEADSTAVPIWTMGQGWLMSL*QPTRIG
Trigger: CCCGATCCGCGTAGGCTGCCACAAGCTCATCAACCA...GCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CCA 90 bp GGCCTTAGCCACAAACGCCTTCCGACTAACCAGCTTGGTGCCGTAGCTCAGGCATGGTTGATGAGCTTGTaGCAGCCTACGCGGATCGGG +
Preference number: 4 (lower is better)
Translates to: GLSHKRLPTNQLGAVAQAWLMSL*QPTRIG
Trigger: CCCGATCCGCGTAGGCTGCCACAAGCTCATCAACCA...TGCCTGAGCTACGGCACCAAGCTGGTTAGTCGGAAGGCGTTTGTGGCTAAGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR CCA 90 bp AACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTTTGGTGAAGATGTGGTaGTTGATGAGCTTGTGGCAG +
Preference number: 4 (lower is better)
Translates to: NFPLHPAAMPSVGWAWCPLVKMW*LMSLWQ
Trigger: CTGCCACAAGCTCATCAACCACCACATCTTCACCAA...AGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CCA 90 bp ATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGGCCACGAAGACGCACTaGACCACGTGCTTAAGTCCT +
Preference number: 4 (lower is better)
Translates to: MGEADSTAVPIWTMGQGRATKTH*TTCLSP
Trigger: AGGACTTAAGCACGTGGTCCAGTGCGTCTTCGTGGC...CCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CCA 90 bp GAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTGGCCACGAAGACGCACTaGACCACGTGCTTAAGTCCT +
Preference number: 4 (lower is better)
Translates to: EKQTPQQCPSGQWGRAGLATKTH*TTCLSP
Trigger: AGGACTTAAGCACGTGGTCCAGTGCGTCTTCGTGGC...CAGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CCA 90 bp CCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGACGGTGGGTGGTATTaGTCTGCTGAAGGGAATCTC +
Preference number: 4 (lower is better)
Translates to: PLTFPCTPPPCLQLGGPGDGGWY*SAEGNL
Trigger: GAGATTCCCTTCAGCAGACCAATACCACCCACCGTC...ACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CCA 90 bp ACCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGCTGGGCCGCTTTCCATaGGCAGCTTTGGACATATTG +
Preference number: 4 (lower is better)
Translates to: TFNFPLHPAAMPSVGWAWLGRFP*AALDIL
Trigger: CAATATGTCCAAAGCTGCCCATGGAAAGCGGCCCAG...CCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CCA 90 bp CCTGGTACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCCAAGGTTCCCAATGCTaGGCCGCTTTCCATGGGCAG +
Preference number: 4 (lower is better)
Translates to: PGTWEKQTPQQCPSGQWGQGSQC*AAFHGQ
Trigger: CTGCCCATGGAAAGCGGCCCAGCATTGGGAACCTTG...GCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTACCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CCA 90 bp CAGACACTTAGGGTCCTGGTCTGGCAATTTTGGCCTGATGTGATGCCACAAGACGGGTTGCTGGAGGGGTaGCCCACGACCGGGTCGAGT +
Preference number: 4 (lower is better)
Translates to: QTLRVLVWQFWPDVMPQDGLLEG*PTTGSS
Trigger: ACTCGACCCGGTCGTGGGCCACCCCTCCAGCAACCC...GTCTTGTGGCATCACATCAGGCCAAAATTGCCAGACCAGGACCCTAAGTGTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR CCA 90 bp GGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTGACAGTCAGGCTGGCTaGTGTGAAAGTCCGGTAGGA +
Preference number: 4 (lower is better)
Translates to: GEADSTAVPIWTMGQGRSDSQAG*CESPVG
Trigger: TCCTACCGGACTTTCACACCAGCCAGCCTGACTGTC...AGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CCA 90 bp CCAAGGGGCAGAGCAGCCAGCTGGACCTGCTCTGTAATTCACTTACTTACTTACGGCCCACATCCCCGTTaGCTCGGGGACGCACGTTCC +
Preference number: 4 (lower is better)
Translates to: PRGRAASWTCSVIHLLTYGPHPR*LGDARS
Trigger: GGAACGTGCGTCCCCGAGCCAACGGGGATGTGGGCC...GTAAGTAAGTAAGTGAATTACAGAGCAGGTCCAGCTGGCTGCTCTGCCCCTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR CCA 90 bp GGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTTGGTGCCCTGGTACATaGGAGAAGCAGACTCCACAG +
Preference number: 4 (lower is better)
Translates to: GEADSTAVPIWTMGQGRSWCPGT*EKQTPQ
Trigger: CTGTGGAGTCTGCTTCTCCCATGTACCAGGGCACCA...AGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CCA 90 bp AGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTGGTGGTGCCCTGGTACATaGGAGAAGCAGACTCCACAG +
Preference number: 4 (lower is better)
Translates to: RSRLHSSAHLDNGAGQVWWCPGT*EKQTPQ
Trigger: CTGTGGAGTCTGCTTCTCCCATGTACCAGGGCACCA...CCAGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CCA 90 bp CTCGTCTGTGTACCAGGAGCTGCGGTGCAGGGACGGCAGGCTGCCGTTCACCTGGACAGTTGCAACCCATaGTGGATCCAAAGGTACAGT +
Preference number: 4 (lower is better)
Translates to: LVCVPGAAVQGRQAAVHLDSCNP*WIQRYS
Trigger: ACTGTACCTTTGGATCCACCATGGGTTGCAACTGTC...CAGGTGAACGGCAGCCTGCCGTCCCTGCACCGCAGCTCCTGGTACACAGACGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636448.1
CDS-3UTR CCA 90 bp AACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTCTGGTCTGGCAATTTTaGCCTGATGTGATGCCACAA +
Preference number: 4 (lower is better)
Translates to: NFPLHPAAMPSVGWAWCPLVWQF*PDVMPQ
Trigger: TTGTGGCATCACATCAGGCCAAAATTGCCAGACCAG...AGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR CCA 90 bp CGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCACTTAGGGTCCTGGTCTaGCAATTTTGGCCTGATGTG +
Preference number: 4 (lower is better)
Translates to: RRHAFSWVGLVPWYMGEALRVLV*QFWPDV
Trigger: CACATCAGGCCAAAATTGCCAGACCAGGACCCTAAG...TGCTTCTCCCATGTACCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR CCA 90 bp AGCGCCGAGGGGCCTGTCAGTCTTTGGGAGTTCGGGCAAACTAGGGATGCAGGAGGGCCTGTCAGTCTTTaGGAGTTCGGGCAAACTAGG +
Preference number: 4 (lower is better)
Translates to: SAEGPVSLWEFGQTRDAGGPVSL*EFGQTR
Trigger: CCTAGTTTGCCCGAACTCCCAAAGACTGACAGGCCC...TCCTGCATCCCTAGTTTGCCCGAACTCCCAAAGACTGACAGGCCCCTCGGCGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CCA 90 bp CCTTCCGGAGGAGTGCTTTGCTTGGAAGGGGTCTCCCTGGGGCCTTGGGTCTGCGTGGACACGTTAAGATaGAACCTGAGGTGTTGCCTG +
Preference number: 4 (lower is better)
Translates to: PSGGVLCLEGVSLGPWVCVDTLR*NLRCCL
Trigger: CAGGCAACACCTCAGGTTCCATCTTAACGTGTCCAC...GCAGACCCAAGGCCCCAGGGAGACCCCTTCCAAGCAAAGCACTCCTCCGGAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CCA 90 bp CCTTCCGGAGGAGTGCTTTGCTTGGAAGGGGTCTCCCTGGGGCCTTGGGTCTGCCCACTTTGGGTGTCTTaGGCTCAGCATCAGATGTAC +
Preference number: 4 (lower is better)
Translates to: PSGGVLCLEGVSLGPWVCPLWVS*AQHQMY
Trigger: GTACATCTGATGCTGAGCCCAAGACACCCAAAGTGG...GCAGACCCAAGGCCCCAGGGAGACCCCTTCCAAGCAAAGCACTCCTCCGGAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636938.1
CDS-3UTR TCA 90 bp ACTGACTTTGGAAAAGATCATCGCCTCTATCAGACACTTAGGGTCCTGGTCTGGCACTGTGCTGGGCGTTaGGGCGGGGGCGGAATGGGG +
Preference number: 4 (lower is better)
Translates to: TDFGKDHRLYQTLRVLVWHCAGR*GGGGMG
Trigger: CCCCATTCCGCCCCCGCCTCAACGCCCAGCACAGTG...CCAGACCAGGACCCTAAGTGTCTGATAGAGGCGATGATCTTTTCCAAAGTCAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR TCA 90 bp TCATCACCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGTCCAGATTTGCCGCTTaGGTGGTTCCCGCCTTCTGT +
Preference number: 4 (lower is better)
Translates to: SSPLTFPCTPPPCLQLGGSRFAA*VVPAFC
Trigger: ACAGAAGGCGGGAACCACTCAAGCGGCAAATCTGGA...CCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGGTGATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR TCA 90 bp GGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTTGTCCTCAGCTTGGGTaGTCCAATCCAAGTAGCCCT +
Preference number: 4 (lower is better)
Translates to: GEADSTAVPIWTMGQGRSCPQLG*SNPSSP
Trigger: AGGGCTACTTGGATTGGATCACCCAAGCTGAGGACA...AGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR TCA 90 bp TCCCTTTCACGAAAAAGAACCACCGTGAGCAACGTCCGCGACAGGCAGCCCTGGCCAGCATCTCGCAGGTaGACAGAGCCAAGAGGACTT +
Preference number: 4 (lower is better)
Translates to: SLSRKRTTVSNVRDRQPWPASRR*TEPRGL
Trigger: AAGTCCTCTTGGCTCTGTTCACCTGCGAGATGCTGG...CCAGGGCTGCCTGTCGCGGACGTTGCTCACGGTGGTTCTTTTTCGTGAAAGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR TCA 90 bp TCCACCTTCCGGAGGAGTGCTTTGCTTGGAAGGGGTCTCCCTGGGGCCTTGGGTGGATTGAATCCCAAATaGCACCAGAGACACCCCAAC +
Preference number: 4 (lower is better)
Translates to: STFRRSALLGRGLPGALGGLNPK*HQRHPN
Trigger: GTTGGGGTGTCTCTGGTGTCATTTGGGATTCAATCC...ACCCAAGGCCCCAGGGAGACCCCTTCCAAGCAAAGCACTCCTCCGGAAGGTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR TCA 90 bp CCTCCTCACCCATCCTCTGTGAGAGGGCGGGGCCTGCTGTTTCCTGCAGCTGGGCATCCTTGTAGAGGATaGAAAGTCCCCTGCATTCTT +
Preference number: 4 (lower is better)
Translates to: PPHPSSVRGRGLLFPAAGHPCRG*KVPCIL
Trigger: AAGAATGCAGGGGACTTTTCATCCTCTACAAGGATG...CCCAGCTGCAGGAAACAGCAGGCCCCGCCCTCTCACAGAGGATGGGTGAGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR TCA 90 bp CCTTCCGGAGGAGTGCTTTGCTTGGAAGGGGTCTCCCTGGGGCCTTGGGTCTGCTGTCCATGGCATCATTaGACATCTTGGACTGCTCGT +
Preference number: 4 (lower is better)
Translates to: PSGGVLCLEGVSLGPWVCCPWHH*TSWTAR
Trigger: ACGAGCAGTCCAAGATGTTCAATGATGCCATGGACA...GCAGACCCAAGGCCCCAGGGAGACCCCTTCCAAGCAAAGCACTCCTCCGGAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR TCA 90 bp TCATCACCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCCGGGGTTGTAATCTaGCTCAGGGTCACAGAGCTT +
Preference number: 4 (lower is better)
Translates to: SSPLTFPCTPPPCLQLGGPGVVI*LRVTEL
Trigger: AAGCTCTGTGACCCTGAGTCAGATTACAACCCCGGG...CCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGGTGATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR TCA 90 bp GGCCTTAGCCACAAACGCCTTCCGACTAACCAGCTTGGTGCCGTAGCTCAGGCACCCGGGGTTGTAATCTaGCTCAGGGTCACAGAGCTT +
Preference number: 4 (lower is better)
Translates to: GLSHKRLPTNQLGAVAQAPGVVI*LRVTEL
Trigger: AAGCTCTGTGACCCTGAGTCAGATTACAACCCCGGG...TGCCTGAGCTACGGCACCAAGCTGGTTAGTCGGAAGGCGTTTGTGGCTAAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000636938.1
ENST00000638120.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR TCA 90 bp CCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCAGAAGCATTCCTCACTACTaGAATACTCCTGCTCCCCCA +
Preference number: 4 (lower is better)
Translates to: PPCLQLGGPGALVHGRSRSIPHY*NTPAPP
Trigger: TGGGGGAGCAGGAGTATTTCAGTAGTGAGGAATGCT...TCTGCTTCTCCCATGTACCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR TCA 90 bp CCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTAGCATTCCTCACTACTaGAATACTCCTGCTCCCCCA +
Preference number: 4 (lower is better)
Translates to: PLTFPCTPPPCLQLGGPGSIPHY*NTPAPP
Trigger: TGGGGGAGCAGGAGTATTTCAGTAGTGAGGAATGCT...ACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR TCA 90 bp ATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGCCTTGGAGATCTCCGTaGATCATAGCAAACGGGCGA +
Preference number: 4 (lower is better)
Translates to: MGEADSTAVPIWTMGQGRPWRSP*IIANGR
Trigger: TCGCCCGTTTGCTATGATTCACGGAGATCTCCAAGG...CCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR TCA 90 bp CCTGGTACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCTCAGGCTGGCTGGTGTaGAAGTCCGGTAGGAGATGT +
Preference number: 4 (lower is better)
Translates to: PGTWEKQTPQQCPSGQWGSGWLV*KSGRRC
Trigger: ACATCTCCTACCGGACTTTCACACCAGCCAGCCTGA...GCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTACCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR TCA 90 bp CGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCACTGGTAGCTGGGTTCTaGCTTACTTACACACCGTAT +
Preference number: 4 (lower is better)
Translates to: RRHAFSWVGLVPWYMGEALVAGF*LTYTPY
Trigger: ATACGGTGTGTAAGTAAGTCAGAACCCAGCTACCAG...TGCTTCTCCCATGTACCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR TCA 90 bp CCTCCTCACCCATCCTCTGTGAGAGGGCGGGGCCTGCTGTTTCCTGCAGCTGGGAGAAAACCTTATTTATaGGGTCCCATTGCCCTCGCA +
Preference number: 4 (lower is better)
Translates to: PPHPSSVRGRGLLFPAAGRKPYL*GPIALA
Trigger: TGCGAGGGCAATGGGACCTCATAAATAAGGTTTTCT...CCCAGCTGCAGGAAACAGCAGGCCCCGCCCTCTCACAGAGGATGGGTGAGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR TCA 90 bp AGCGCCGAGGGGCCTGTCAGTCTTTGGGAGTTCGGGCAAACTAGGGATGCAGGAAGAACCCAGGTTCCCTaGCTCCCAGTGTCCTTGAAA +
Preference number: 4 (lower is better)
Translates to: SAEGPVSLWEFGQTRDAGRTQVP*LPVSLK
Trigger: TTTCAAGGACACTGGGAGTCAGGGAACCTGGGTTCT...TCCTGCATCCCTAGTTTGCCCGAACTCCCAAAGACTGACAGGCCCCTCGGCGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000645528.2
CDS-3UTR GCA 90 bp CCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCAGAGCATCGATTGCAGCTTaGCAAGACAGGACAGTTTGC +
Preference number: 4 (lower is better)
Translates to: PPCLQLGGPGALVHGRSRASIAA*QDRTVC
Trigger: GCAAACTGTCCTGTCTTGGCAAGCTGCAATCGATGC...TCTGCTTCTCCCATGTACCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR GCA 90 bp GCAGATGAGCCACGGCCCCGCTTCCACCTTCCGGAGGAGTGCTTTGCTTGGAAGTCTAGCAGCATCGATTaGAGCTTGCCAAGACAGGAC +
Preference number: 4 (lower is better)
Translates to: ADEPRPRFHLPEECFAWKSSSID*SLPRQD
Trigger: GTCCTGTCTTGGCAAGCTGCAATCGATGCTGCTAGA...CTTCCAAGCAAAGCACTCCTCCGGAAGGTGGAAGCGGGGCCGTGGCTCATCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR GCA 90 bp GGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTCACTCCTACATTCCGTaGCATTGGCAGTACACTGGC +
Preference number: 4 (lower is better)
Translates to: GEADSTAVPIWTMGQGRSHSYIP*HWQYTG
Trigger: GCCAGTGTACTGCCAATGGCACGGAATGTAGGAGTG...AGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR GCA 90 bp GCTCCGCAGATGAGCCACGGCCCCGCTTCCACCTTCCGGAGGAGTGCTTTGCTTCTCAGGGAAGTCCAGTaGCTGGTCACTTTGAAGATT +
Preference number: 4 (lower is better)
Translates to: APQMSHGPASTFRRSALLLREVQ*LVTLKI
Trigger: AATCTTCAAAGTGACCAGGCACTGGACTTCCCTGAG...AAGCAAAGCACTCCTCCGGAAGGTGGAAGCGGGGCCGTGGCTCATCTGCGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR GCA 90 bp TCATCACCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGACTTTCAGTTGGGTCTaGTTCGCTGAGGGCCACGTC +
Preference number: 4 (lower is better)
Translates to: SSPLTFPCTPPPCLQLGGTFSWV*FAEGHV
Trigger: GACGTGGCCCTCAGCGAAGCAGACCCAACTGAAAGT...CCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGGTGATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR GCA 90 bp GCTCCGCAGATGAGCCACGGCCCCGCTTCCACCTTCCGGAGGAGTGCTTTGCTTAGTTCTTCATTAGCTTaGTCCAGGTTCCCTTCGGTC +
Preference number: 4 (lower is better)
Translates to: APQMSHGPASTFRRSALLSSSLA*SRFPSV
Trigger: GACCGAAGGGAACCTGGAGCAAGCTAATGAAGAACT...AAGCAAAGCACTCCTCCGGAAGGTGGAAGCGGGGCCGTGGCTCATCTGCGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR GCA 90 bp TGCAGAGGCAGGGCCGTGCGATGGGGGAAGATGGGAGACGACGGGACCTCTTCCCCATTTTCAGACACATaGTCAAGGTTCCCAATGCTG +
Preference number: 4 (lower is better)
Translates to: CRGRAVRWGKMGDDGTSSPFSDT*SRFPML
Trigger: CAGCATTGGGAACCTTGAGCATGTGTCTGAAAATGG...GGAAGAGGTCCCGTCGTCTCCCATCTTCCCCCATCGCACGGCCCTGCCTCTGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000636448.1
CDS-3UTR GCA 90 bp ACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCATGTTGCTGCATTAGATaGAGAGGCAGGGCCGTGCGA +
Preference number: 4 (lower is better)
Translates to: TWEKQTPQQCPSGQWGRACCCIR*RGRAVR
Trigger: TCGCACGGCCCTGCCTCTGCATCTAATGCAGCAACA...TGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR GCA 90 bp TACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCTGTTGCTGCATTAGATaGAGAGGCAGGGCCGTGCGA +
Preference number: 4 (lower is better)
Translates to: YMGEADSTAVPIWTMGQGCCCIR*RGRAVR
Trigger: TCGCACGGCCCTGCCTCTGCATCTAATGCAGCAACA...GCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR GCA 90 bp GGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCAGACTCCACAGCAGTGCCCATGCCATGATCTGTTGCTaGATTAGATGCAGAGGCAGG +
Preference number: 4 (lower is better)
Translates to: GGPGALVHGRSRLHSSAHAMICC*IRCRGR
Trigger: CCTGCCTCTGCATCTAATGCAGCAACAGATCATGGC...ATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTACCAGGGCACCAGGCCCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR GCA 90 bp ATACCCAAGGGGCAGAGCAGCCAGCTGGACCTGCTCTGTAATTCACTTACTTACTGCACCCCGCCGCCATaGCTTCAGTTGGGTGGGCCT +
Preference number: 4 (lower is better)
Translates to: IPKGQSSQLDLLCNSLTYCTPPP*LQLGGP
Trigger: AGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCA...GTAAGTAAGTGAATTACAGAGCAGGTCCAGCTGGCTGCTCTGCCCCTTGGGTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR GCA 90 bp CTTAAGCAGCACCACCAGTCCCCAGAGGACAAGAGCAGCTATATCTCATCCACCCCCTGGCACAGTACCTaGCCTGTCGGAGGCTCTCAC +
Preference number: 4 (lower is better)
Translates to: LKQHHQSPEDKSSYISSTPWHST*PVGGSH
Trigger: GTGAGAGCCTCCGACAGGGCAGGTACTGTGCCAGGG...GGTGGATGAGATATAGCTGCTCTTGTCCTCTGGGGACTGGTGGTGCTGCTTAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR GCA 90 bp GGCCTTAGCCACAAACGCCTTCCGACTAACCAGCTTGGTGCCGTAGCTCAGGCACACCTTCCGGAGGAGTaGTTTGCTTGGAAGGGGTCT +
Preference number: 4 (lower is better)
Translates to: GLSHKRLPTNQLGAVAQAHLPEE*FAWKGS
Trigger: AGACCCCTTCCAAGCAAAGCACTCCTCCGGAAGGTG...TGCCTGAGCTACGGCACCAAGCTGGTTAGTCGGAAGGCGTTTGTGGCTAAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR GCA 90 bp CCTTCCGGAGGAGTGCTTTGCTTGGAAGGGGTCTCCCTGGGGCCTTGGGTCTGCTGGAACCTGAGGTGTTaGCTGGATTGGTTTTGGCAT +
Preference number: 4 (lower is better)
Translates to: PSGGVLCLEGVSLGPWVCWNLRC*LDWFWH
Trigger: ATGCCAAAACCAATCCAGGCAACACCTCAGGTTCCA...GCAGACCCAAGGCCCCAGGGAGACCCCTTCCAAGCAAAGCACTCCTCCGGAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CCA 90 bp ACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGAGAGATCCTACAGGTaGGGGTGCAGAGGTGCTCAT +
Preference number: 4 (lower is better)
Translates to: TWEKQTPQQCPSGQWGRAERSYR*GCRGAH
Trigger: ATGAGCACCTCTGCACCCCCACCTGTAGGATCTCTC...TGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CCA 90 bp AGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTGGGGGCAGGTCGGCTGTTaGACGAGTTACCCTGTTTTT +
Preference number: 4 (lower is better)
Translates to: RSRLHSSAHLDNGAGQVWGQVGC*TSYPVF
Trigger: AAAAACAGGGTAACTCGTCCAACAGCCGACCTGCCC...CCAGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CCA 90 bp ACCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGGATTTGCCGCTTGAGTaGTTCCCGCCTTCTGTTTCT +
Preference number: 4 (lower is better)
Translates to: TFNFPLHPAAMPSVGWAWDLPLE*FPPSVS
Trigger: AGAAACAGAAGGCGGGAACCACTCAAGCGGCAAATC...CCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CCA 90 bp GCGCCGAGGGGCCTGTCAGTCTTTGGGAGTTCGGGCAAACTAGGGATGCAGGACGATTTGCCGCTTGAGTaGTTCCCGCCTTCTGTTTCT +
Preference number: 4 (lower is better)
Translates to: APRGLSVFGSSGKLGMQDDLPLE*FPPSVS
Trigger: AGAAACAGAAGGCGGGAACCACTCAAGCGGCAAATC...GTCCTGCATCCCTAGTTTGCCCGAACTCCCAAAGACTGACAGGCCCCTCGGCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR CCA 90 bp GAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTGGAACGCACATGGAGCTaGGTCCTCTTCAGCTACGAT +
Preference number: 4 (lower is better)
Translates to: EKQTPQQCPSGQWGRAGLERTWS*VLFSYD
Trigger: ATCGTAGCTGAAGAGGACCCAGCTCCATGTGCGTTC...CAGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CCA 90 bp TCCACCTTCCGGAGGAGTGCTTTGCTTGGAAGGGGTCTCCCTGGGGCCTTGGGTTACATTCCGTGCCATTaGCAGTACACTGGCGTCCAT +
Preference number: 4 (lower is better)
Translates to: STFRRSALLGRGLPGALGYIPCH*QYTGVH
Trigger: ATGGACGCCAGTGTACTGCCAATGGCACGGAATGTA...ACCCAAGGCCCCAGGGAGACCCCTTCCAAGCAAAGCACTCCTCCGGAAGGTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR CCA 90 bp CACCCCCAAAATAATCACACCAAATGGCCAAAGGGCTTTCTTTATCAGTTGGCCCAGAGGGCCCCGCCTTaGCCGCGCCTCTCCGTCTCC +
Preference number: 4 (lower is better)
Translates to: HPQNNHTKWPKGFLYQLAQRAPP*PRLSVS
Trigger: GGAGACGGAGAGGCGCGGCCAAGGCGGGGCCCTCTG...GGCCAACTGATAAAGAAAGCCCTTTGGCCATTTGGTGTGATTATTTTGGGGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000636627.1
CDS-3UTR CCA 90 bp GGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCAGACTCCACAGCAGTGCCCATTCGCCTGTCAGGATCTaGAACACTGTGAGAAGTGCT +
Preference number: 4 (lower is better)
Translates to: GGPGALVHGRSRLHSSAHSPVRI*NTVRSA
Trigger: AGCACTTCTCACAGTGTTCCAGATCCTGACAGGCGA...ATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTACCAGGGCACCAGGCCCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CCA 90 bp GAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTGTTCCTCTTCCCCTACTaGCACATCGCAAGGCGGATA +
Preference number: 4 (lower is better)
Translates to: EKQTPQQCPSGQWGRAGLFLFPY*HIARRI
Trigger: TATCCGCCTTGCGATGTGCCAGTAGGGGAAGAGGAA...CAGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CCA 90 bp CCTTCCGGAGGAGTGCTTTGCTTGGAAGGGGTCTCCCTGGGGCCTTGGGTCTGCTTGGTGAAGATGTGGTaGTTGATGAGCTTGTGGCAG +
Preference number: 4 (lower is better)
Translates to: PSGGVLCLEGVSLGPWVCLVKMW*LMSLWQ
Trigger: CTGCCACAAGCTCATCAACCACCACATCTTCACCAA...GCAGACCCAAGGCCCCAGGGAGACCCCTTCCAAGCAAAGCACTCCTCCGGAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR CCA 90 bp CCTCCTCACCCATCCTCTGTGAGAGGGCGGGGCCTGCTGTTTCCTGCAGCTGGGTCTTCACAACGGAGATaGCACTGGATTGAATCCCAA +
Preference number: 4 (lower is better)
Translates to: PPHPSSVRGRGLLFPAAGSSQRR*HWIESQ
Trigger: TTGGGATTCAATCCAGTGCCATCTCCGTTGTGAAGA...CCCAGCTGCAGGAAACAGCAGGCCCCGCCCTCTCACAGAGGATGGGTGAGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CCA 90 bp TCATCACCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGGCCACGAAGACGCACTaGACCACGTGCTTAAGTCCT +
Preference number: 4 (lower is better)
Translates to: SSPLTFPCTPPPCLQLGGATKTH*TTCLSP
Trigger: AGGACTTAAGCACGTGGTCCAGTGCGTCTTCGTGGC...CCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGGTGATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CCA 90 bp GCAGATGAGCCACGGCCCCGCTTCCACCTTCCGGAGGAGTGCTTTGCTTGGAAGTTCCCCTTGAACAACTaGACCCCGATACAGGCAAAC +
Preference number: 4 (lower is better)
Translates to: ADEPRPRFHLPEECFAWKFPLNN*TPIQAN
Trigger: GTTTGCCTGTATCGGGGTCCAGTTGTTCAAGGGGAA...CTTCCAAGCAAAGCACTCCTCCGGAAGGTGGAAGCGGGGCCGTGGCTCATCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CCA 90 bp TCCCTTTCACGAAAAAGAACCACCGTGAGCAACGTCCGCGACAGGCAGCCCTGGGTCACAGAGCTTCCCTaGGAGACAGGCCAGCATGAT +
Preference number: 4 (lower is better)
Translates to: SLSRKRTTVSNVRDRQPWVTELP*ETGQHD
Trigger: ATCATGCTGGCCTGTCTCCCAGGGAAGCTCTGTGAC...CCAGGGCTGCCTGTCGCGGACGTTGCTCACGGTGGTTCTTTTTCGTGAAAGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CCA 90 bp GCAGATGAGCCACGGCCCCGCTTCCACCTTCCGGAGGAGTGCTTTGCTTGGAAGCTCATCATCACCAGCTaGAGGGACAACTTGGTCAAG +
Preference number: 4 (lower is better)
Translates to: ADEPRPRFHLPEECFAWKLIITS*RDNLVK
Trigger: CTTGACCAAGTTGTCCCTCCAGCTGGTGATGATGAG...CTTCCAAGCAAAGCACTCCTCCGGAAGGTGGAAGCGGGGCCGTGGCTCATCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CCA 90 bp TACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCGGAATTGAAGGCCTTTaGACATGCAGGGGACGGTGG +
Preference number: 4 (lower is better)
Translates to: YMGEADSTAVPIWTMGQGGIEGL*TCRGRW
Trigger: CCACCGTCCCCTGCATGTCCAAAGGCCTTCAATTCC...GCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CCA 90 bp CTTAAGCAGCACCACCAGTCCCCAGAGGACAAGAGCAGCTATATCTCATCCACCGGTGGGATGCTGGGGTaGGAGGTAGTAGGCGTCTCC +
Preference number: 4 (lower is better)
Translates to: LKQHHQSPEDKSSYISSTGGMLG*EVVGVS
Trigger: GGAGACGCCTACTACCTCCCACCCCAGCATCCCACC...GGTGGATGAGATATAGCTGCTCTTGTCCTCTGGGGACTGGTGGTGCTGCTTAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR CCA 90 bp CACCAGTCCCCAGAGGACAAGAGCAGCTATATCTCATCCACCTATGCATTTCTGGACGGGACCTCTTCCTaGCTGCTCTGCCGGCGCAGG +
Preference number: 4 (lower is better)
Translates to: HQSPEDKSSYISSTYAFLDGTSS*LLCRRR
Trigger: CCTGCGCCGGCAGAGCAGCCAGGAAGAGGTCCCGTC...CAGAAATGCATAGGTGGATGAGATATAGCTGCTCTTGTCCTCTGGGGACTGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR CCA 90 bp ATACCCAAGGGGCAGAGCAGCCAGCTGGACCTGCTCTGTAATTCACTTACTTACGGCAGGGCCGTGCGATaGGGGAAGATGGGAGACGAC +
Preference number: 4 (lower is better)
Translates to: IPKGQSSQLDLLCNSLTYGRAVR*GKMGDD
Trigger: GTCGTCTCCCATCTTCCCCCATCGCACGGCCCTGCC...GTAAGTAAGTGAATTACAGAGCAGGTCCAGCTGGCTGCTCTGCCCCTTGGGTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR CCA 90 bp CAGACACTTAGGGTCCTGGTCTGGCAATTTTGGCCTGATGTGATGCCACAAGACGGCAGGGCCGTGCGATaGGGGAAGATGGGAGACGAC +
Preference number: 4 (lower is better)
Translates to: QTLRVLVWQFWPDVMPQDGRAVR*GKMGDD
Trigger: GTCGTCTCCCATCTTCCCCCATCGCACGGCCCTGCC...GTCTTGTGGCATCACATCAGGCCAAAATTGCCAGACCAGGACCCTAAGTGTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR CCA 90 bp AGGGACGGCAGGCTGCCGTTCACCTGGTCCAGGGCCTCTGACTGCTCCACTTGGCTCGGTGAGTACTTCTaGGCTTTACTTGAATCTAGG +
Preference number: 4 (lower is better)
Translates to: RDGRLPFTWSRASDCSTWLGEYF*ALLESR
Trigger: CCTAGATTCAAGTAAAGCCCAGAAGTACTCACCGAG...CCAAGTGGAGCAGTCAGAGGCCCTGGACCAGGTGAACGGCAGCCTGCCGTCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636448.1
CDS-3UTR CCA 90 bp CAGTCCCCAGAGGACAAGAGCAGCTATATCTCATCCACCTATGCATTTCTGCACGTAGGGAGGGGTTGCTaGAGGGGTGGCCCACGACCG +
Preference number: 4 (lower is better)
Translates to: QSPEDKSSYISSTYAFLHVGRGC*RGGPRP
Trigger: CGGTCGTGGGCCACCCCTCCAGCAACCCCTCCCTAC...GTGCAGAAATGCATAGGTGGATGAGATATAGCTGCTCTTGTCCTCTGGGGACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR CCA 90 bp ATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCAGACTCCAGACAGTCAGGCTGGCTaGTGTGAAAGTCCGGTAGGA +
Preference number: 4 (lower is better)
Translates to: MPSVGWAWCPGTWEKQTPDSQAG*CESPVG
Trigger: TCCTACCGGACTTTCACACCAGCCAGCCTGACTGTC...TGGAGTCTGCTTCTCCCATGTACCAGGGCACCAGGCCCACCCAACTGAAGGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CCA 90 bp AACCGTAACTATGGATACCCAAGGGGCAGAGCAGCCAGCTGGACCTGCTCTGTATGTTCCGGAAGCTGCTaGGGACAGTCAGGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: NRNYGYPRGRAASWTCSVCSGSC*GQSGWL
Trigger: CAGCCAGCCTGACTGTCCCCAGCAGCTTCCGGAACA...TACAGAGCAGGTCCAGCTGGCTGCTCTGCCCCTTGGGTATCCATAGTTACGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR CCA 90 bp CTTAAGCAGCACCACCAGTCCCCAGAGGACAAGAGCAGCTATATCTCATCCACCCTGGGGCCGAGCGCATaGTACTCTGCCAGGCTCAAC +
Preference number: 4 (lower is better)
Translates to: LKQHHQSPEDKSSYISSTLGPSA*YSARLN
Trigger: GTTGAGCCTGGCAGAGTACCATGCGCTCGGCCCCAG...GGTGGATGAGATATAGCTGCTCTTGTCCTCTGGGGACTGGTGGTGCTGCTTAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR CCA 90 bp CTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGAGGACGCAGTGTATTTaGGGGAAAGGGTTTAAAAAT +
Preference number: 4 (lower is better)
Translates to: LSPAPRRHAFSWVGLVPWRTQCI*GKGFKN
Trigger: ATTTTTAAACCCTTTCCCCCAAATACACTGCGTCCT...CCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CCA 90 bp GGAGGTCATGGCGGACTGGCATACAAAAGGAACTCTGTCAGCTCAGCGCCGAGGGGGCCTGTCAGTCTTTaGGAGTTCGGGCAAACTAGG +
Preference number: 4 (lower is better)
Translates to: GGHGGLAYKRNSVSSAPRGPVSL*EFGQTR
Trigger: CCTAGTTTGCCCGAACTCCCAAAGACTGACAGGCCC...CCTCGGCGCTGAGCTGACAGAGTTCCTTTTGTATGCCAGTCCGCCATGACCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CCA 90 bp CCTTCCGGAGGAGTGCTTTGCTTGGAAGGGGTCTCCCTGGGGCCTTGGGTCTGCCTTCTCACTGTATTCTaGACTGGGTCTCTGCAGAGA +
Preference number: 4 (lower is better)
Translates to: PSGGVLCLEGVSLGPWVCLLTVF*TGSLQR
Trigger: TCTCTGCAGAGACCCAGTCCAGAATACAGTGAGAAG...GCAGACCCAAGGCCCCAGGGAGACCCCTTCCAAGCAAAGCACTCCTCCGGAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CCA 90 bp TCCACCTTCCGGAGGAGTGCTTTGCTTGGAAGGGGTCTCCCTGGGGCCTTGGGTAGGTGTTGCCTGGATTaGTTTTGGCATGCGGGTGTA +
Preference number: 4 (lower is better)
Translates to: STFRRSALLGRGLPGALGRCCLD*FWHAGV
Trigger: TACACCCGCATGCCAAAACCAATCCAGGCAACACCT...ACCCAAGGCCCCAGGGAGACCCCTTCCAAGCAAAGCACTCCTCCGGAAGGTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CCA 90 bp AGCGCCGAGGGGCCTGTCAGTCTTTGGGAGTTCGGGCAAACTAGGGATGCAGGACCAAACTGGCCACTTTaGGTGTCTTGGGCTCAGCAT +
Preference number: 4 (lower is better)
Translates to: SAEGPVSLWEFGQTRDAGPNWPL*VSWAQH
Trigger: ATGCTGAGCCCAAGACACCCAAAGTGGCCAGTTTGG...TCCTGCATCCCTAGTTTGCCCGAACTCCCAAAGACTGACAGGCCCCTCGGCGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636938.1
3UTR CAA 72 bp GGTGGGATGCTGGGGTGGGAGGTAGTAGGCGTCTCCTaGGAGATCTCCGTGAATCATAGCAAACGGGCGAGT +
Preference number: 4 (lower is better)
Translates to: GGMLGWEVVGVS*EISVNHSKRAS
Trigger: ACTCGCCCGTTTGCTATGATTCACGGAGATCTCCAAGGAGACGCCTACTACCTCCCACCCCAGCATCCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636448.1
CDS-3UTR TCA 90 bp GGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTTTGGAGCTATTCGGCTaGGAAGTTGGTCCTTCACCA +
Preference number: 4 (lower is better)
Translates to: GEADSTAVPIWTMGQGRSLELFG*EVGPSP
Trigger: TGGTGAAGGACCAACTTCTCAGCCGAATAGCTCCAA...AGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR TCA 90 bp ATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTTGGAGCTATTCGGCTaGGAAGTTGGTCCTTCACCA +
Preference number: 4 (lower is better)
Translates to: MGEADSTAVPIWTMGQGRLELFG*EVGPSP
Trigger: TGGTGAAGGACCAACTTCTCAGCCGAATAGCTCCAA...CCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR TCA 90 bp TCATCACCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGAGGCACGGAGGGCTTTaGCATCAAAGCCTCCAGATT +
Preference number: 4 (lower is better)
Translates to: SSPLTFPCTPPPCLQLGGRHGGL*HQSLQI
Trigger: AATCTGGAGGCTTTGATGTCAAAGCCCTCCGTGCCT...CCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGGTGATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR TCA 90 bp CCTGGTACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGCACGGAGGGCTTTaGCATCAAAGCCTCCAGATT +
Preference number: 4 (lower is better)
Translates to: PGTWEKQTPQQCPSGQWGRHGGL*HQSLQI
Trigger: AATCTGGAGGCTTTGATGTCAAAGCCCTCCGTGCCT...GCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTACCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR TCA 90 bp TCCCTTTCACGAAAAAGAACCACCGTGAGCAACGTCCGCGACAGGCAGCCCTGGAGGCACGGAGGGCTTTaGCATCAAAGCCTCCAGATT +
Preference number: 4 (lower is better)
Translates to: SLSRKRTTVSNVRDRQPWRHGGL*HQSLQI
Trigger: AATCTGGAGGCTTTGATGTCAAAGCCCTCCGTGCCT...CCAGGGCTGCCTGTCGCGGACGTTGCTCACGGTGGTTCTTTTTCGTGAAAGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR TCA 90 bp CTTAAGCAGCACCACCAGTCCCCAGAGGACAAGAGCAGCTATATCTCATCCACCCTGGCGTCCATTCCCTaGGAACGCACATGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: LKQHHQSPEDKSSYISSTLASIP*ERTWSW
Trigger: CCAGCTCCATGTGCGTTCTCAGGGAATGGACGCCAG...GGTGGATGAGATATAGCTGCTCTTGTCCTCTGGGGACTGGTGGTGCTGCTTAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR TCA 90 bp TACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCTGTCCTCAGCTTGGGTaGTCCAATCCAAGTAGCCCT +
Preference number: 4 (lower is better)
Translates to: YMGEADSTAVPIWTMGQGCPQLG*SNPSSP
Trigger: AGGGCTACTTGGATTGGATCACCCAAGCTGAGGACA...GCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR TCA 90 bp GGCCTTAGCCACAAACGCCTTCCGACTAACCAGCTTGGTGCCGTAGCTCAGGCATGTCCTCAGCTTGGGTaGTCCAATCCAAGTAGCCCT +
Preference number: 4 (lower is better)
Translates to: GLSHKRLPTNQLGAVAQACPQLG*SNPSSP
Trigger: AGGGCTACTTGGATTGGATCACCCAAGCTGAGGACA...TGCCTGAGCTACGGCACCAAGCTGGTTAGTCGGAAGGCGTTTGTGGCTAAGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR TCA 90 bp TTTCAAGGCCTTAGCCACAAACGCCTTCCGACTAACCAGCTTGGTGCCGTAGCTCCAGCCAGTAAAACGTaGCAGACTTCACGGCGGCCC +
Preference number: 4 (lower is better)
Translates to: FQGLSHKRLPTNQLGAVAPASKT*QTSRRP
Trigger: GGGCCGCCGTGAAGTCTGTCACGTTTTACTGGCTGG...AGCTACGGCACCAAGCTGGTTAGTCGGAAGGCGTTTGTGGCTAAGGCCTTGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR TCA 90 bp GGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCAGACTCCACAGCAGTGCCCATAGTGCCTGGTCACTTTaGAGATTCTTAAGAGGCGCA +
Preference number: 4 (lower is better)
Translates to: GGPGALVHGRSRLHSSAHSAWSL*RFLRGA
Trigger: TGCGCCTCTTAAGAATCTTCAAAGTGACCAGGCACT...ATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTACCAGGGCACCAGGCCCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR TCA 90 bp GCGCCGAGGGGCCTGTCAGTCTTTGGGAGTTCGGGCAAACTAGGGATGCAGGACAGTGCCTGGTCACTTTaGAGATTCTTAAGAGGCGCA +
Preference number: 4 (lower is better)
Translates to: APRGLSVFGSSGKLGMQDSAWSL*RFLRGA
Trigger: TGCGCCTCTTAAGAATCTTCAAAGTGACCAGGCACT...GTCCTGCATCCCTAGTTTGCCCGAACTCCCAAAGACTGACAGGCCCCTCGGCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR TCA 90 bp GCGCCGAGGGGCCTGTCAGTCTTTGGGAGTTCGGGCAAACTAGGGATGCAGGACGGATCTGGAACACTGTaGGAAGTGCTTGAGGGAAAT +
Preference number: 4 (lower is better)
Translates to: APRGLSVFGSSGKLGMQDGSGTL*EVLEGN
Trigger: ATTTCCCTCAAGCACTTCTCACAGTGTTCCAGATCC...GTCCTGCATCCCTAGTTTGCCCGAACTCCCAAAGACTGACAGGCCCCTCGGCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR TCA 90 bp GAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTGGGATTGAATCCCAAATaGCACCAGAGACACCCCAAC +
Preference number: 4 (lower is better)
Translates to: EKQTPQQCPSGQWGRAGLGLNPK*HQRHPN
Trigger: GTTGGGGTGTCTCTGGTGTCATTTGGGATTCAATCC...CAGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR TCA 90 bp ATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGGATAGAACTTCCCCTTaGACAACTGGACCCCGATAC +
Preference number: 4 (lower is better)
Translates to: MGEADSTAVPIWTMGQGRDRTSP*TTGPRY
Trigger: GTATCGGGGTCCAGTTGTTCAAGGGGAAGTTCTATC...CCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR TCA 90 bp AGCGCCGAGGGGCCTGTCAGTCTTTGGGAGTTCGGGCAAACTAGGGATGCAGGAGATAGAACTTCCCCTTaGACAACTGGACCCCGATAC +
Preference number: 4 (lower is better)
Translates to: SAEGPVSLWEFGQTRDAGDRTSP*TTGPRY
Trigger: GTATCGGGGTCCAGTTGTTCAAGGGGAAGTTCTATC...TCCTGCATCCCTAGTTTGCCCGAACTCCCAAAGACTGACAGGCCCCTCGGCGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR TCA 90 bp GCAGATGAGCCACGGCCCCGCTTCCACCTTCCGGAGGAGTGCTTTGCTTGGAAGTGTCCATGGCATCATTaGACATCTTGGACTGCTCGT +
Preference number: 4 (lower is better)
Translates to: ADEPRPRFHLPEECFAWKCPWHH*TSWTAR
Trigger: ACGAGCAGTCCAAGATGTTCAATGATGCCATGGACA...CTTCCAAGCAAAGCACTCCTCCGGAAGGTGGAAGCGGGGCCGTGGCTCATCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR TCA 90 bp ACCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGGAGATTGGCATTTGTTaGGGTGGGAACTTGCTTTCC +
Preference number: 4 (lower is better)
Translates to: TFNFPLHPAAMPSVGWAWEIGIC*GGNLLS
Trigger: GGAAAGCAAGTTCCCACCTCAACAAATGCCAATCTC...CCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR TCA 90 bp CCTGGTACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGCAGTGGGGGTCCCTaGAATAGCCATGTATCTCTG +
Preference number: 4 (lower is better)
Translates to: PGTWEKQTPQQCPSGQWGSSGGP*NSHVSL
Trigger: CAGAGATACATGGCTATTTCAGGGACCCCCACTGCT...GCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTACCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR TCA 90 bp AACCGTAACTATGGATACCCAAGGGGCAGAGCAGCCAGCTGGACCTGCTCTGTAGCAGGCACTCAAAGTTaGAGGAGGATCTCCGGTGGG +
Preference number: 4 (lower is better)
Translates to: NRNYGYPRGRAASWTCSVAGTQS*RRISGG
Trigger: CCCACCGGAGATCCTCCTTCAACTTTGAGTGCCTGC...TACAGAGCAGGTCCAGCTGGCTGCTCTGCCCCTTGGGTATCCATAGTTACGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR TCA 90 bp TACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCGGCCGGCAACTGCCATaGTCTGTTGCTGCATTAGAT +
Preference number: 4 (lower is better)
Translates to: YMGEADSTAVPIWTMGQGGRQLP*SVAALD
Trigger: ATCTAATGCAGCAACAGATCATGGCAGTTGCCGGCC...GCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR TCA 90 bp TACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCGGTCGAGTGACTCGGTaGGTACTTCTGGGCTTTACT +
Preference number: 4 (lower is better)
Translates to: YMGEADSTAVPIWTMGQGGRVTR*VLLGFT
Trigger: AGTAAAGCCCAGAAGTACTCACCGAGTCACTCGACC...GCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR TCA 90 bp AGAATCCTTGGGGATGATGGTAGCCTCGGGGCCTCTCAGAGTCGATGTTTCTGCCCATCTCGTCGATGGTaGGGTCACAGGCATCAGCGA +
Preference number: 4 (lower is better)
Translates to: RILGDDGSLGASQSRCFCPSRRW*GHRHQR
Trigger: TCGCTGATGCCTGTGACCTCACCATCGACGAGATGG...GCAGAAACATCGACTCTGAGAGGCCCCGAGGCTACCATCATCCCCAAGGATTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636448.1
CDS-3UTR TCA 90 bp GAAAGTCCGGTAGGAGATGTCGGGCTCGTCTGTGTACCAGGAGCTGCGGTGCAGGGGGCTACAAGGTGGTaGTGCATATCATTTCATCCG +
Preference number: 4 (lower is better)
Translates to: ESPVGDVGLVCVPGAAVQGATRW*CISFHP
Trigger: CGGATGAAATGATATGCATCACCACCTTGTAGCCCC...CTGCACCGCAGCTCCTGGTACACAGACGAGCCCGACATCTCCTACCGGACTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636448.1
CDS-3UTR TCA 90 bp CCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTCTGGTAGCTGGGTTCTaGCTTACTTACACACCGTAT +
Preference number: 4 (lower is better)
Translates to: PLTFPCTPPPCLQLGGPGLVAGF*LTYTPY
Trigger: ATACGGTGTGTAAGTAAGTCAGAACCCAGCTACCAG...ACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR TCA 90 bp TCATCACCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCAGTTGCCCTTAGCGTaGCAGTCAGAAACCGACCAT +
Preference number: 4 (lower is better)
Translates to: SSPLTFPCTPPPCLQLGGQLPLA*QSETDH
Trigger: ATGGTCGGTTTCTGACTGTCACGCTAAGGGCAACTG...CCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGGTGATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR TCA 90 bp GGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCAGACTCCACAGCAGTGCCCATGATTTTGAGATGGCTTaGCAGAGACTTCCACAGCAG +
Preference number: 4 (lower is better)
Translates to: GGPGALVHGRSRLHSSAHDFEMA*QRLPQQ
Trigger: CTGCTGTGGAAGTCTCTGTCAAGCCATCTCAAAATC...ATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTACCAGGGCACCAGGCCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350061.11
ENST00000422281.7
CDS-3UTR GCA 90 bp ATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGAAGTCTGGTGCCTCTTaGATAGTTTGCCTCGTTCGC +
Preference number: 4 (lower is better)
Translates to: MGEADSTAVPIWTMGQGRKSGAS*IVCLVR
Trigger: GCGAACGAGGCAAACTATGCAAGAGGCACCAGACTT...CCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR GCA 90 bp ACCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGCTGGAAATCTCCCCGTaGTTTTGCCTTCTCTCTTTC +
Preference number: 4 (lower is better)
Translates to: TFNFPLHPAAMPSVGWAWLEISP*FCLLSF
Trigger: GAAAGAGAGAAGGCAAAAGCACGGGGAGATTTCCAG...CCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR GCA 90 bp GCGCCGAGGGGCCTGTCAGTCTTTGGGAGTTCGGGCAAACTAGGGATGCAGGACCTCAGGGAAGTCCAGTaGCTGGTCACTTTGAAGATT +
Preference number: 4 (lower is better)
Translates to: APRGLSVFGSSGKLGMQDLREVQ*LVTLKI
Trigger: AATCTTCAAAGTGACCAGGCACTGGACTTCCCTGAG...GTCCTGCATCCCTAGTTTGCCCGAACTCCCAAAGACTGACAGGCCCCTCGGCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR GCA 90 bp ATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTTGCCGCCAAACAGCTaGATCCCAAGCAAGGAAAAG +
Preference number: 4 (lower is better)
Translates to: MGEADSTAVPIWTMGQGRLPPNS*IPSKEK
Trigger: CTTTTCCTTGCTTGGGATGCAGCTGTTTGGCGGCAA...CCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR GCA 90 bp GCTCCGCAGATGAGCCACGGCCCCGCTTCCACCTTCCGGAGGAGTGCTTTGCTTTTGAAATCACTGTTTTaGCAGATCCGTTCACGGACC +
Preference number: 4 (lower is better)
Translates to: APQMSHGPASTFRRSALLLKSLF*QIRSRT
Trigger: GGTCCGTGAACGGATCTGGCAAAACAGTGATTTCAA...AAGCAAAGCACTCCTCCGGAAGGTGGAAGCGGGGCCGTGGCTCATCTGCGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR GCA 90 bp GCGCCGAGGGGCCTGTCAGTCTTTGGGAGTTCGGGCAAACTAGGGATGCAGGACAGTTCTTCATTAGCTTaGTCCAGGTTCCCTTCGGTC +
Preference number: 4 (lower is better)
Translates to: APRGLSVFGSSGKLGMQDSSSLA*SRFPSV
Trigger: GACCGAAGGGAACCTGGAGCAAGCTAATGAAGAACT...GTCCTGCATCCCTAGTTTGCCCGAACTCCCAAAGACTGACAGGCCCCTCGGCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR GCA 90 bp TACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCTCTGGCCCAATGTCATaGAGTGTCCTTAATCCCGCC +
Preference number: 4 (lower is better)
Translates to: YMGEADSTAVPIWTMGQGSGPMS*SVLNPA
Trigger: GGCGGGATTAAGGACACTGCATGACATTGGGCCAGA...GCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR GCA 90 bp GAAATGGCGCTCCCTGCGGCTGGTATTAGGTTACCATTGGCACCGAAGGAACCAGCTCAAGGTTCCCAATaGTGGGCCGCTTTCCATGGG +
Preference number: 4 (lower is better)
Translates to: EMALPAAGIRLPLAPKEPAQGSQ*WAAFHG
Trigger: CCCATGGAAAGCGGCCCAGCATTGGGAACCTTGAGC...TGGTTCCTTCGGTGCCAATGGTAACCTAATACCAGCCGCAGGGAGCGCCATTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR GCA 90 bp GGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCAGAGTCGATGTTTCTaGCTGGGTATCTGCTGTAGT +
Preference number: 4 (lower is better)
Translates to: GGPGALVHGRSRLHSSAHQSRCF*LGICCS
Trigger: ACTACAGCAGATACCCAGGCAGAAACATCGACTCTG...ATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTACCAGGGCACCAGGCCCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR GCA 90 bp GAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTGCTGTCCGCACTCCTCTaGTTGTCGCTGTTTTTGTTC +
Preference number: 4 (lower is better)
Translates to: EKQTPQQCPSGQWGRAGLLSALL*LSLFLF
Trigger: GAACAAAAACAGCGACAAGCAGAGGAGTGCGGACAG...CAGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR GCA 90 bp CTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGTTACCTGGTTGCGAGTaGATTATTATTCCAGTTTAC +
Preference number: 4 (lower is better)
Translates to: LSPAPRRHAFSWVGLVPWLPGCE*IIIPVY
Trigger: GTAAACTGGAATAATAATGCACTCGCAACCAGGTAA...CCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR GCA 90 bp CGGTGCAGGGACGGCAGGCTGCCGTTCACCTGGTCCAGGGCCTCTGACTGCTCCAGGACCCATGGATATTaGTGCAGTTCAAATACAATA +
Preference number: 4 (lower is better)
Translates to: RCRDGRLPFTWSRASDCSRTHGY*CSSNTI
Trigger: TATTGTATTTGAACTGCAGCAATATCCATGGGTCCT...GGAGCAGTCAGAGGCCCTGGACCAGGTGAACGGCAGCCTGCCGTCCCTGCACCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636448.1
CDS-3UTR GCA 90 bp CCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCAGCCAGCTGGACCTaGTCTGTAATTCACTTACTT +
Preference number: 4 (lower is better)
Translates to: PLTFPCTPPPCLQLGGPGAASWT*SVIHLL
Trigger: AAGTAAGTGAATTACAGAGCAGGTCCAGCTGGCTGC...ACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR GCA 90 bp CTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGACCTTGAAGTGTTTTTaGCTGGATCAGAGTAAGAAT +
Preference number: 4 (lower is better)
Translates to: LSPAPRRHAFSWVGLVPWTLKCF*LDQSKN
Trigger: ATTCTTACTCTGATCCAGGCAAAAACACTTCAAGGT...CCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR GCA 90 bp GAGCTGCGGTGCAGGGACGGCAGGCTGCCGTTCACCTGGTCCAGGGCCTCTGACGTGCTTAGGCTTAAATaGGATGACTTTCAAAACCAT +
Preference number: 4 (lower is better)
Translates to: ELRCRDGRLPFTWSRASDVLRLK*DDFQNH
Trigger: ATGGTTTTGAAAGTCATCGCATTTAAGCCTAAGCAC...GTCAGAGGCCCTGGACCAGGTGAACGGCAGCCTGCCGTCCCTGCACCGCAGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636448.1
CDS-3UTR CCA 90 bp GTGTCTTGGGCTCAGCATCAGATGTACAGACTCCAACCACCACTTGGAATCAGCGAGGCGGGGGCGGAATaGGGAAGGGGATCACCAAGA +
Preference number: 4 (lower is better)
Translates to: VSWAQHQMYRLQPPLGISEAGAE*GRGSPR
Trigger: TCTTGGTGATCCCCTTCCCCATTCCGCCCCCGCCTC...GCTGATTCCAAGTGGTGGTTGGAGTCTGTACATCTGATGCTGAGCCCAAGACAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636938.1
CDS-3UTR CCA 90 bp TGCAACCCATGGTGGATCCAAAGGTACAGTATCAAAATCATGGAACTCTTGCCCTGCAGGGCACTGTGCTaGGCGTTGAGGCGGGGGCGG +
Preference number: 4 (lower is better)
Translates to: CNPWWIQRYSIKIMELLPCRALC*ALRRGR
Trigger: CCGCCCCCGCCTCAACGCCCAGCACAGTGCCCTGCA...GGGCAAGAGTTCCATGATTTTGATACTGTACCTTTGGATCCACCATGGGTTGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR CCA 90 bp ACCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGACAGGACAGTTTGCTTaGAGCTATTCGGCTGAGAAG +
Preference number: 4 (lower is better)
Translates to: TFNFPLHPAAMPSVGWAWTGQFA*SYSAEK
Trigger: CTTCTCAGCCGAATAGCTCCAAGCAAACTGTCCTGT...CCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CCA 90 bp GCGCCGAGGGGCCTGTCAGTCTTTGGGAGTTCGGGCAAACTAGGGATGCAGGACACAGGACAGTTTGCTTaGAGCTATTCGGCTGAGAAG +
Preference number: 4 (lower is better)
Translates to: APRGLSVFGSSGKLGMQDTGQFA*SYSAEK
Trigger: CTTCTCAGCCGAATAGCTCCAAGCAAACTGTCCTGT...GTCCTGCATCCCTAGTTTGCCCGAACTCCCAAAGACTGACAGGCCCCTCGGCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR CCA 90 bp TACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCGAGGTGCTCATAGTTTaGGCAGCCTTGGCCTGTCTA +
Preference number: 4 (lower is better)
Translates to: YMGEADSTAVPIWTMGQGEVLIV*AALACL
Trigger: TAGACAGGCCAAGGCTGCCCAAACTATGAGCACCTC...GCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CCA 90 bp TCCCTTTCACGAAAAAGAACCACCGTGAGCAACGTCCGCGACAGGCAGCCCTGGGAGGTGCTCATAGTTTaGGCAGCCTTGGCCTGTCTA +
Preference number: 4 (lower is better)
Translates to: SLSRKRTTVSNVRDRQPWEVLIV*AALACL
Trigger: TAGACAGGCCAAGGCTGCCCAAACTATGAGCACCTC...CCAGGGCTGCCTGTCGCGGACGTTGCTCACGGTGGTTCTTTTTCGTGAAAGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR CCA 90 bp CCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGGACAACTTGTAAACTaGGCACTCCTGACACTAGTC +
Preference number: 4 (lower is better)
Translates to: PLTFPCTPPPCLQLGGPGGQLVN*ALLTLV
Trigger: GACTAGTGTCAGGAGTGCCCAGTTTACAAGTTGTCC...ACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CCA 90 bp ATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTACATTCCGTGCCATTaGCAGTACACTGGCGTCCAT +
Preference number: 4 (lower is better)
Translates to: MGEADSTAVPIWTMGQGRYIPCH*QYTGVH
Trigger: ATGGACGCCAGTGTACTGCCAATGGCACGGAATGTA...CCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CCA 90 bp AGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTGGTACATTCCGTGCCATTaGCAGTACACTGGCGTCCAT +
Preference number: 4 (lower is better)
Translates to: RSRLHSSAHLDNGAGQVWYIPCH*QYTGVH
Trigger: ATGGACGCCAGTGTACTGCCAATGGCACGGAATGTA...CCAGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CCA 90 bp ATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCAGACTCCAGTTTGGATTTTGAGATaGCTTGACCCCACCGCCGAC +
Preference number: 4 (lower is better)
Translates to: MPSVGWAWCPGTWEKQTPVWILR*LDPTAD
Trigger: GTCGGCGGTGGGGTCAAGCCATCTCAAAATCCAAAC...TGGAGTCTGCTTCTCCCATGTACCAGGGCACCAGGCCCACCCAACTGAAGGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288139.11
CDS-3UTR CCA 90 bp GCTCCGCAGATGAGCCACGGCCCCGCTTCCACCTTCCGGAGGAGTGCTTTGCTTGAGACGAAATATGCTTaGAGGCCCAAGCTGTACATT +
Preference number: 4 (lower is better)
Translates to: APQMSHGPASTFRRSALLETKYA*RPKLYI
Trigger: AATGTACAGCTTGGGCCTCCAAGCATATTTCGTCTC...AAGCAAAGCACTCCTCCGGAAGGTGGAAGCGGGGCCGTGGCTCATCTGCGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR CCA 90 bp AACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTTCACTGTTGGCTATCTaGTTGACTTCTGGTTTGTTG +
Preference number: 4 (lower is better)
Translates to: NFPLHPAAMPSVGWAWCPSLLAI*LTSGLL
Trigger: CAACAAACCAGAAGTCAACCAGATAGCCAACAGTGA...AGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CCA 90 bp CCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCAGATTGGTGAAGATGTGGTaGTTGATGAGCTTGTGGCAG +
Preference number: 4 (lower is better)
Translates to: PPCLQLGGPGALVHGRSRLVKMW*LMSLWQ
Trigger: CTGCCACAAGCTCATCAACCACCACATCTTCACCAA...TCTGCTTCTCCCATGTACCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CCA 90 bp CACTCTCTGGACTTTCTGGAGACACTAGCATTAAAACCAAAGCACTGGCCAAGGAGGAGTGGCTGCGGATaGGGTCCTCTGCGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: HSLDFLETLALKPKHWPRRSGCG*GPLRPG
Trigger: CCCTGGCCGCAGAGGACCCCATCCGCAGCCACTCCT...CCTTGGCCAGTGCTTTGGTTTTAATGCTAGTGTCTCCAGAAAGTCCAGAGAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636627.1
CDS-3UTR CCA 90 bp TTTCCTGTGGACACGTTAAGATGGAACCTGAGGTGTTGCCTGGATTGGTTTTGGAGGAGTGGCTGCGGATaGGGTCCTCTGCGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: FPVDTLRWNLRCCLDWFWRSGCG*GPLRPG
Trigger: CCCTGGCCGCAGAGGACCCCATCCGCAGCCACTCCT...CCAAAACCAATCCAGGCAACACCTCAGGTTCCATCTTAACGTGTCCACAGGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR CCA 90 bp CCTTCCGGAGGAGTGCTTTGCTTGGAAGGGGTCTCCCTGGGGCCTTGGGTCTGCTCTTCACAACGGAGATaGCACTGGATTGAATCCCAA +
Preference number: 4 (lower is better)
Translates to: PSGGVLCLEGVSLGPWVCSSQRR*HWIESQ
Trigger: TTGGGATTCAATCCAGTGCCATCTCCGTTGTGAAGA...GCAGACCCAAGGCCCCAGGGAGACCCCTTCCAAGCAAAGCACTCCTCCGGAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CCA 90 bp GAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTGTTCCCCTTGAACAACTaGACCCCGATACAGGCAAAC +
Preference number: 4 (lower is better)
Translates to: EKQTPQQCPSGQWGRAGLFPLNN*TPIQAN
Trigger: GTTTGCCTGTATCGGGGTCCAGTTGTTCAAGGGGAA...CAGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CCA 90 bp AGCGCCGAGGGGCCTGTCAGTCTTTGGGAGTTCGGGCAAACTAGGGATGCAGGAACTGGTAGGGGTTTTTaGGGATGTATCTCCGCAAGG +
Preference number: 4 (lower is better)
Translates to: SAEGPVSLWEFGQTRDAGTGRGF*GCISAR
Trigger: CCTTGCGGAGATACATCCCCAAAAACCCCTACCAGT...TCCTGCATCCCTAGTTTGCCCGAACTCCCAAAGACTGACAGGCCCCTCGGCGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CCA 90 bp CCTTCCGGAGGAGTGCTTTGCTTGGAAGGGGTCTCCCTGGGGCCTTGGGTCTGCGCTGGAGGGACAACTTaGTCAAGTAATTTCATGCTG +
Preference number: 4 (lower is better)
Translates to: PSGGVLCLEGVSLGPWVCAGGTT*SSNFML
Trigger: CAGCATGAAATTACTTGACCAAGTTGTCCCTCCAGC...GCAGACCCAAGGCCCCAGGGAGACCCCTTCCAAGCAAAGCACTCCTCCGGAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CCA 90 bp GAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTGCTCATCATCACCAGCTaGAGGGACAACTTGGTCAAG +
Preference number: 4 (lower is better)
Translates to: EKQTPQQCPSGQWGRAGLLIITS*RDNLVK
Trigger: CTTGACCAAGTTGTCCCTCCAGCTGGTGATGATGAG...CAGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CCA 90 bp AGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTGGCTCATCATCACCAGCTaGAGGGACAACTTGGTCAAG +
Preference number: 4 (lower is better)
Translates to: RSRLHSSAHLDNGAGQVWLIITS*RDNLVK
Trigger: CTTGACCAAGTTGTCCCTCCAGCTGGTGATGATGAG...CCAGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CCA 90 bp CGACACTCCAATCCTATAGATCACCACGTTGCTCCTCTGTCCCCAGCACCCCTTCAAGGTTCCCAATGCTaGGCCGCTTTCCATGGGCAG +
Preference number: 4 (lower is better)
Translates to: RHSNPIDHHVAPLSPAPLQGSQC*AAFHGQ
Trigger: CTGCCCATGGAAAGCGGCCCAGCATTGGGAACCTTG...AAGGGGTGCTGGGGACAGAGGAGCAACGTGGTGATCTATAGGATTGGAGTGTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR CCA 90 bp AACCGTAACTATGGATACCCAAGGGGCAGAGCAGCCAGCTGGACCTGCTCTGTATTTGCCTGCTCCAGGTaGGCGAGCTGTCATCCTCGT +
Preference number: 4 (lower is better)
Translates to: NRNYGYPRGRAASWTCSVFACSR*ASCHPR
Trigger: ACGAGGATGACAGCTCGCCCACCTGGAGCAGGCAAA...TACAGAGCAGGTCCAGCTGGCTGCTCTGCCCCTTGGGTATCCATAGTTACGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR CCA 90 bp AGAATCCTTGGGGATGATGGTAGCCTCGGGGCCTCTCAGAGTCGATGTTTCTGCCCAGGCTCAACCGCTTaGGACCTGTTCCTACCAGGT +
Preference number: 4 (lower is better)
Translates to: RILGDDGSLGASQSRCFCPGSTA*DLFLPG
Trigger: ACCTGGTAGGAACAGGTCCCAAGCGGTTGAGCCTGG...GCAGAAACATCGACTCTGAGAGGCCCCGAGGCTACCATCATCCCCAAGGATTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636448.1
CDS-3UTR CCA 90 bp CTTAAGCAGCACCACCAGTCCCCAGAGGACAAGAGCAGCTATATCTCATCCACCGCTGTTTCCTGCAGCTaGGGCCGAGCGCATGGTACT +
Preference number: 4 (lower is better)
Translates to: LKQHHQSPEDKSSYISSTAVSCS*GRAHGT
Trigger: AGTACCATGCGCTCGGCCCCAGCTGCAGGAAACAGC...GGTGGATGAGATATAGCTGCTCTTGTCCTCTGGGGACTGGTGGTGCTGCTTAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR CCA 90 bp ATACCCAAGGGGCAGAGCAGCCAGCTGGACCTGCTCTGTAATTCACTTACTTACTGCCCATCTGGACAATaGGGCAGGGCAGGTCTGGCC +
Preference number: 4 (lower is better)
Translates to: IPKGQSSQLDLLCNSLTYCPSGQ*GRAGLA
Trigger: GGCCAGACCTGCCCTGCCCCATTGTCCAGATGGGCA...GTAAGTAAGTGAATTACAGAGCAGGTCCAGCTGGCTGCTCTGCCCCTTGGGTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR CCA 90 bp CTTAAGCAGCACCACCAGTCCCCAGAGGACAAGAGCAGCTATATCTCATCCACCACAGCAGTGCCCATCTaGACAATGGGGCAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: LKQHHQSPEDKSSYISSTTAVPI*TMGQGR
Trigger: CCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGT...GGTGGATGAGATATAGCTGCTCTTGTCCTCTGGGGACTGGTGGTGCTGCTTAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR CCA 90 bp CGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCAAGTTGCAACCCATGGTaGATCCAAAGGTACAGTATC +
Preference number: 4 (lower is better)
Translates to: RRHAFSWVGLVPWYMGEASCNPW*IQRYSI
Trigger: GATACTGTACCTTTGGATCCACCATGGGTTGCAACT...TGCTTCTCCCATGTACCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR CCA 90 bp CTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGTTACTTACCAGAGGGTaGTTCAAGTCAAACAAACAA +
Preference number: 4 (lower is better)
Translates to: LSPAPRRHAFSWVGLVPWLLTRG*FKSNKQ
Trigger: TTGTTTGTTTGACTTGAACCACCCTCTGGTAAGTAA...CCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR CCA 90 bp TCCACCTTCCGGAGGAGTGCTTTGCTTGGAAGGGGTCTCCCTGGGGCCTTGGGTTCTGTAGGGCAATTGTaGTGTTCTTCGCAGGGTACT +
Preference number: 4 (lower is better)
Translates to: STFRRSALLGRGLPGALGSVGQL*CSSQGT
Trigger: AGTACCCTGCGAAGAACACCACAATTGCCCTACAGA...ACCCAAGGCCCCAGGGAGACCCCTTCCAAGCAAAGCACTCCTCCGGAAGGTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CCA 90 bp AGCCACAAACGCCTTCCGACTAACCAGCTTGGTGCCGTAGCTCAGGCAGAAAATGAGGAGTGCTTTGCTTaGAAGGGGTCTCCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: SHKRLPTNQLGAVAQAENEECFA*KGSPWG
Trigger: GCCCCAGGGAGACCCCTTCCAAGCAAAGCACTCCTC...ATTTTCTGCCTGAGCTACGGCACCAAGCTGGTTAGTCGGAAGGCGTTTGTGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000636938.1
ENST00000638120.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CCA 90 bp GCTCCGCAGATGAGCCACGGCCCCGCTTCCACCTTCCGGAGGAGTGCTTTGCTTTGCAGGACTTTGGAATaGAGTCAGATACCCACCTTA +
Preference number: 4 (lower is better)
Translates to: APQMSHGPASTFRRSALLCRTLE*SQIPTL
Trigger: TAAGGTGGGTATCTGACTCCATTCCAAAGTCCTGCA...AAGCAAAGCACTCCTCCGGAAGGTGGAAGCGGGGCCGTGGCTCATCTGCGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CCA 90 bp GGAGGTCATGGCGGACTGGCATACAAAAGGAACTCTGTCAGCTCAGCGCCGAGGACGCTCAGGAGGTCATaGCGGACTGGCATACAAAAG +
Preference number: 4 (lower is better)
Translates to: GGHGGLAYKRNSVSSAPRTLRRS*RTGIQK
Trigger: CTTTTGTATGCCAGTCCGCCATGACCTCCTGAGCGT...CCTCGGCGCTGAGCTGACAGAGTTCCTTTTGTATGCCAGTCCGCCATGACCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CCA 90 bp AGCGCCGAGGGGCCTGTCAGTCTTTGGGAGTTCGGGCAAACTAGGGATGCAGGAGATGAGGTTTGGGTGTaGTGGTGTTTCCTGTGGACA +
Preference number: 4 (lower is better)
Translates to: SAEGPVSLWEFGQTRDAGDEVWV*WCFLWT
Trigger: TGTCCACAGGAAACACCACCACACCCAAACCTCATC...TCCTGCATCCCTAGTTTGCCCGAACTCCCAAAGACTGACAGGCCCCTCGGCGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000645528.2
3UTR CAA 72 bp ATAGCAAACGGGCGAGTCATCGTCCTCCAAGAATCCTaGGGGATGATGGTAGCCTCGGGGCCTCTCAGAGTC +
Preference number: 4 (lower is better)
Translates to: IANGRVIVLQES*GMMVASGPLRV
Trigger: GACTCTGAGAGGCCCCGAGGCTACCATCATCCCCAAGGATTCTTGGAGGACGATGACTCGCCCGTTTGCTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636448.1
CDS-3UTR TCA 90 bp GCTGTTTCAGTAGAAATAAGCCCACTTGAGACTTTTCCCTTTCAAGGCCTTAGCCACTGTGCTGGGCGTTaGGGCGGGGGCGGAATGGGG +
Preference number: 4 (lower is better)
Translates to: AVSVEISPLETFPFQGLSHCAGR*GGGGMG
Trigger: CCCCATTCCGCCCCCGCCTCAACGCCCAGCACAGTG...GCTAAGGCCTTGAAAGGGAAAAGTCTCAAGTGGGCTTATTTCTACTGAAACAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636938.1
CDS-3UTR TCA 90 bp GGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTCTCTTGGCGTATTGCTaGCGTTTTCTTTGGGAGAGA +
Preference number: 4 (lower is better)
Translates to: GEADSTAVPIWTMGQGRSLLAYC*RFLWER
Trigger: TCTCTCCCAAAGAAAACGTCAGCAATACGCCAAGAG...AGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR TCA 90 bp CTTAAGCAGCACCACCAGTCCCCAGAGGACAAGAGCAGCTATATCTCATCCACCGGCCCCCGTAAGCCATaGTGCCATCGTACATCACAG +
Preference number: 4 (lower is better)
Translates to: LKQHHQSPEDKSSYISSTGPRKP*CHRTSQ
Trigger: CTGTGATGTACGATGGCATCATGGCTTACGGGGGCC...GGTGGATGAGATATAGCTGCTCTTGTCCTCTGGGGACTGGTGGTGCTGCTTAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR TCA 90 bp GGTTCCCTGACTCCCAGTGTCCTTGAAACTAGACCACACTGCTTCCAAAGAGGCGGCCCCCGTAAGCCATaGTGCCATCGTACATCACAG +
Preference number: 4 (lower is better)
Translates to: GSLTPSVLETRPHCFQRGGPRKP*CHRTSQ
Trigger: CTGTGATGTACGATGGCATCATGGCTTACGGGGGCC...GCCTCTTTGGAAGCAGTGTGGTCTAGTTTCAAGGACACTGGGAGTCAGGGAACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636938.1
CDS-3UTR TCA 90 bp GGCCTTAGCCACAAACGCCTTCCGACTAACCAGCTTGGTGCCGTAGCTCAGGCAGGATTGAATCCCAAATaGCACCAGAGACACCCCAAC +
Preference number: 4 (lower is better)
Translates to: GLSHKRLPTNQLGAVAQAGLNPK*HQRHPN
Trigger: GTTGGGGTGTCTCTGGTGTCATTTGGGATTCAATCC...TGCCTGAGCTACGGCACCAAGCTGGTTAGTCGGAAGGCGTTTGTGGCTAAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR TCA 90 bp CCTGGTACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCGATAGAACTTCCCCTTaGACAACTGGACCCCGATAC +
Preference number: 4 (lower is better)
Translates to: PGTWEKQTPQQCPSGQWGDRTSP*TTGPRY
Trigger: GTATCGGGGTCCAGTTGTTCAAGGGGAAGTTCTATC...GCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTACCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR TCA 90 bp TCCACCTTCCGGAGGAGTGCTTTGCTTGGAAGGGGTCTCCCTGGGGCCTTGGGTGGACGTTGTCGAAGTTaGAATCACTGTTTTGCCAGA +
Preference number: 4 (lower is better)
Translates to: STFRRSALLGRGLPGALGGRCRS*NHCFAR
Trigger: TCTGGCAAAACAGTGATTTCAACTTCGACAACGTCC...ACCCAAGGCCCCAGGGAGACCCCTTCCAAGCAAAGCACTCCTCCGGAAGGTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR TCA 90 bp ATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTGTCCATGGCATCATTaGACATCTTGGACTGCTCGT +
Preference number: 4 (lower is better)
Translates to: MGEADSTAVPIWTMGQGRCPWHH*TSWTAR
Trigger: ACGAGCAGTCCAAGATGTTCAATGATGCCATGGACA...CCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR TCA 90 bp GGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTTGCGTCGAAGCAGAGTaGCCACATCAAGGTGTTTTA +
Preference number: 4 (lower is better)
Translates to: GEADSTAVPIWTMGQGRSCVEAE*PHQGVL
Trigger: TAAAACACCTTGATGTGGTCACTCTGCTTCGACGCA...AGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR TCA 90 bp ATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGGTGGTATTGGTCTGCTaGAGGGAATCTCTCCTATCA +
Preference number: 4 (lower is better)
Translates to: MGEADSTAVPIWTMGQGRVVLVC*RESLLS
Trigger: TGATAGGAGAGATTCCCTTCAGCAGACCAATACCAC...CCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR TCA 90 bp CCTCCTCACCCATCCTCTGTGAGAGGGCGGGGCCTGCTGTTTCCTGCAGCTGGGGGTTTATGGCTTTCTTaGGGCATGACATCTCTTATA +
Preference number: 4 (lower is better)
Translates to: PPHPSSVRGRGLLFPAAGGLWLS*GMTSLI
Trigger: TATAAGAGATGTCATGCCTCAAGAAAGCCATAAACC...CCCAGCTGCAGGAAACAGCAGGCCCCGCCCTCTCACAGAGGATGGGTGAGGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR TCA 90 bp CGACACTCCAATCCTATAGATCACCACGTTGCTCCTCTGTCCCCAGCACCCCTTGTTGGGCCCAGTGACTaGTATGCTAGACCGATGGCT +
Preference number: 4 (lower is better)
Translates to: RHSNPIDHHVAPLSPAPLVGPSD*YARPMA
Trigger: AGCCATCGGTCTAGCATATCAGTCACTGGGCCCAAC...AAGGGGTGCTGGGGACAGAGGAGCAACGTGGTGATCTATAGGATTGGAGTGTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR TCA 90 bp GGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTCTGGTAGCTGGGTTCTaGCTTACTTACACACCGTAT +
Preference number: 4 (lower is better)
Translates to: GEADSTAVPIWTMGQGRSLVAGF*LTYTPY
Trigger: ATACGGTGTGTAAGTAAGTCAGAACCCAGCTACCAG...AGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR TCA 90 bp CGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCACTTCTCTCTTTCCTTTaGGAATTCTCCGCTCAATAC +
Preference number: 4 (lower is better)
Translates to: RRHAFSWVGLVPWYMGEALLSFL*EFSAQY
Trigger: GTATTGAGCGGAGAATTCTCAAAGGAAAGAGAGAAG...TGCTTCTCCCATGTACCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350061.11
ENST00000422281.7
CDS-3UTR TCA 90 bp TCCCTTTCACGAAAAAGAACCACCGTGAGCAACGTCCGCGACAGGCAGCCCTGGACAGATGGGGGAAACTaGGGCACAGAGAGGTTAAGT +
Preference number: 4 (lower is better)
Translates to: SLSRKRTTVSNVRDRQPWTDGGN*GTERLS
Trigger: ACTTAACCTCTCTGTGCCTCAGTTTCCCCCATCTGT...CCAGGGCTGCCTGTCGCGGACGTTGCTCACGGTGGTTCTTTTTCGTGAAAGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000645528.2
CDS-3UTR GCA 90 bp TGTACAGACTCCAACCACCACTTGGAATCAGCTGAGAATTCAAGATCAGACACCGTGTGCAGGGCACTGTaGTGGGCGTTGAGGCGGGGG +
Preference number: 4 (lower is better)
Translates to: CTDSNHHLESAENSRSDTVCRAL*WALRRG
Trigger: CCCCCGCCTCAACGCCCAGCACAGTGCCCTGCACAC...GGTGTCTGATCTTGAATTCTCAGCTGATTCCAAGTGGTGGTTGGAGTCTGTACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636938.1
CDS-3UTR GCA 90 bp ACCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGAAAGAGGAAGTCTGGTaGCTCTTGCATAGTTTGCCT +
Preference number: 4 (lower is better)
Translates to: TFNFPLHPAAMPSVGWAWKEEVW*LLHSLP
Trigger: AGGCAAACTATGCAAGAGGCACCAGACTTCCTCTTT...CCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR GCA 90 bp GGCCTTAGCCACAAACGCCTTCCGACTAACCAGCTTGGTGCCGTAGCTCAGGCAGCATCGATTGCAGCTTaGCAAGACAGGACAGTTTGC +
Preference number: 4 (lower is better)
Translates to: GLSHKRLPTNQLGAVAQAASIAA*QDRTVC
Trigger: GCAAACTGTCCTGTCTTGGCAAGCTGCAATCGATGC...TGCCTGAGCTACGGCACCAAGCTGGTTAGTCGGAAGGCGTTTGTGGCTAAGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR GCA 90 bp TCCCTTTCACGAAAAAGAACCACCGTGAGCAACGTCCGCGACAGGCAGCCCTGGTCTAGCAGCATCGATTaGAGCTTGCCAAGACAGGAC +
Preference number: 4 (lower is better)
Translates to: SLSRKRTTVSNVRDRQPWSSSID*SLPRQD
Trigger: GTCCTGTCTTGGCAAGCTGCAATCGATGCTGCTAGA...CCAGGGCTGCCTGTCGCGGACGTTGCTCACGGTGGTTCTTTTTCGTGAAAGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR GCA 90 bp AACCGTAACTATGGATACCCAAGGGGCAGAGCAGCCAGCTGGACCTGCTCTGTACAAAGCCTCCAGATTTaGCGCTTGAGTGGTTCCCGC +
Preference number: 4 (lower is better)
Translates to: NRNYGYPRGRAASWTCSVQSLQI*RLSGSR
Trigger: GCGGGAACCACTCAAGCGGCAAATCTGGAGGCTTTG...TACAGAGCAGGTCCAGCTGGCTGCTCTGCCCCTTGGGTATCCATAGTTACGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR GCA 90 bp GAGCTTCCTGGCCTGTCCACTTCTCACTGTATTCTGGACTGGGTCTCTGCAGAGCAAAGCCTCCAGATTTaGCGCTTGAGTGGTTCCCGC +
Preference number: 4 (lower is better)
Translates to: ELPGLSTSHCILDWVSAEQSLQI*RLSGSR
Trigger: GCGGGAACCACTCAAGCGGCAAATCTGGAGGCTTTG...CTCTGCAGAGACCCAGTCCAGAATACAGTGAGAAGTGGACAGGCCAGGAAGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR GCA 90 bp ATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGCTGGAAATCTCCCCGTaGTTTTGCCTTCTCTCTTTC +
Preference number: 4 (lower is better)
Translates to: MGEADSTAVPIWTMGQGRLEISP*FCLLSF
Trigger: GAAAGAGAGAAGGCAAAAGCACGGGGAGATTTCCAG...CCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR GCA 90 bp GCGCCGAGGGGCCTGTCAGTCTTTGGGAGTTCGGGCAAACTAGGGATGCAGGACGGAAATTGTCAAAGGTaGTCCGCTTGGTTTGCGTTT +
Preference number: 4 (lower is better)
Translates to: APRGLSVFGSSGKLGMQDGNCQR*SAWFAF
Trigger: AAACGCAAACCAAGCGGAGCACCTTTGACAATTTCC...GTCCTGCATCCCTAGTTTGCCCGAACTCCCAAAGACTGACAGGCCCCTCGGCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR GCA 90 bp CCTCCTCACCCATCCTCTGTGAGAGGGCGGGGCCTGCTGTTTCCTGCAGCTGGGGAACACTGTGAGAAGTaGTTGAGGGAAATTGTCAAA +
Preference number: 4 (lower is better)
Translates to: PPHPSSVRGRGLLFPAAGEHCEK*LREIVK
Trigger: TTTGACAATTTCCCTCAAGCACTTCTCACAGTGTTC...CCCAGCTGCAGGAAACAGCAGGCCCCGCCCTCTCACAGAGGATGGGTGAGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR GCA 90 bp CCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTTTGAAATCACTGTTTTaGCAGATCCGTTCACGGACC +
Preference number: 4 (lower is better)
Translates to: PLTFPCTPPPCLQLGGPGLKSLF*QIRSRT
Trigger: GGTCCGTGAACGGATCTGGCAAAACAGTGATTTCAA...ACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR GCA 90 bp CCTGGTACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCTCTCCGCAAGGGACGTaGTTTCAAGGCGTATTCAAC +
Preference number: 4 (lower is better)
Translates to: PGTWEKQTPQQCPSGQWGSPQGT*FQGVFN
Trigger: GTTGAATACGCCTTGAAAGCACGTCCCTTGCGGAGA...GCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTACCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR GCA 90 bp CCTTCCGGAGGAGTGCTTTGCTTGGAAGGGGTCTCCCTGGGGCCTTGGGTCTGCAGACAATGGCAAAGTTaGTCCCACATGTATACTCCT +
Preference number: 4 (lower is better)
Translates to: PSGGVLCLEGVSLGPWVCRQWQS*SHMYTP
Trigger: AGGAGTATACATGTGGGAGCAACTTTGCCATTGTCT...GCAGACCCAAGGCCCCAGGGAGACCCCTTCCAAGCAAAGCACTCCTCCGGAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR GCA 90 bp ATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGAGTTCTTCATTAGCTTaGTCCAGGTTCCCTTCGGTC +
Preference number: 4 (lower is better)
Translates to: MGEADSTAVPIWTMGQGRSSSLA*SRFPSV
Trigger: GACCGAAGGGAACCTGGAGCAAGCTAATGAAGAACT...CCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR GCA 90 bp CCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTCCATTTTCAGACACATaGTCAAGGTTCCCAATGCTG +
Preference number: 4 (lower is better)
Translates to: PLTFPCTPPPCLQLGGPGPFSDT*SRFPML
Trigger: CAGCATTGGGAACCTTGAGCATGTGTCTGAAAATGG...ACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR GCA 90 bp AGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTGGACTGCCATGATCTGTTaGTGCATTAGATGCAGAGGC +
Preference number: 4 (lower is better)
Translates to: RSRLHSSAHLDNGAGQVWTAMIC*CIRCRG
Trigger: GCCTCTGCATCTAATGCAGCAACAGATCATGGCAGT...CCAGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR GCA 90 bp GACTTACTTACACACCGTATTTCAGAACAGCTAAACAGGAACCAGGACGCAGTGGCAGGGACGGCAGGCTaGCGTTCACCTGGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: DLLTHRISEQLNRNQDAVAGTAG*RSPGPG
Trigger: CCCTGGACCAGGTGAACGGCAGCCTGCCGTCCCTGC...CACTGCGTCCTGGTTCCTGTTTAGCTGTTCTGAAATACGGTGTGTAAGTAAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR GCA 90 bp GGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTAAATTTTGGGTCCCTTaGATAGCGTCCCAAGCCTTC +
Preference number: 4 (lower is better)
Translates to: GEADSTAVPIWTMGQGRSKFWVP*IASQAF
Trigger: GAAGGCTTGGGACGCTATGCAAGGGACCCAAAATTT...AGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR GCA 90 bp ACCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTATCTCATCCACCTATaGATTTCTGCACCAGCGATG +
Preference number: 4 (lower is better)
Translates to: TFNFPLHPAAMPSVGWAWYLIHL*ISAPAM
Trigger: CATCGCTGGTGCAGAAATGCATAGGTGGATGAGATA...CCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR GCA 90 bp TACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCATTGCAGGGAATCCCTaGCAAGGTAACCTGACAGTC +
Preference number: 4 (lower is better)
Translates to: YMGEADSTAVPIWTMGQGIAGNP*QGNLTV
Trigger: GACTGTCAGGTTACCTTGGCAGGGATTCCCTGCAAT...GCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR GCA 90 bp CCTTCCGGAGGAGTGCTTTGCTTGGAAGGGGTCTCCCTGGGGCCTTGGGTCTGCCTTTCTCTGAGTCTCTaGTTGGAAGGGAAAACTGTT +
Preference number: 4 (lower is better)
Translates to: PSGGVLCLEGVSLGPWVCLSLSL*LEGKTV
Trigger: AACAGTTTTCCCTTCCAAGCAGAGACTCAGAGAAAG...GCAGACCCAAGGCCCCAGGGAGACCCCTTCCAAGCAAAGCACTCCTCCGGAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR GCA 90 bp GCTCCGCAGATGAGCCACGGCCCCGCTTCCACCTTCCGGAGGAGTGCTTTGCTTCTTTCTCTGAGTCTCTaGTTGGAAGGGAAAACTGTT +
Preference number: 4 (lower is better)
Translates to: APQMSHGPASTFRRSALLLSLSL*LEGKTV
Trigger: AACAGTTTTCCCTTCCAAGCAGAGACTCAGAGAAAG...AAGCAAAGCACTCCTCCGGAAGGTGGAAGCGGGGCCGTGGCTCATCTGCGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR GCA 90 bp TTTCAAGGCCTTAGCCACAAACGCCTTCCGACTAACCAGCTTGGTGCCGTAGCTCAGCAACCCCAAGGCTaGTGGACACAACCAGGTCTC +
Preference number: 4 (lower is better)
Translates to: FQGLSHKRLPTNQLGAVAQQPQG*WTQPGL
Trigger: GAGACCTGGTTGTGTCCAGCAGCCTTGGGGTTGCTG...AGCTACGGCACCAAGCTGGTTAGTCGGAAGGCGTTTGTGGCTAAGGCCTTGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638120.1
CDS-3UTR CCA 90 bp ATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGGGACAACTTGTAAACTaGGCACTCCTGACACTAGTC +
Preference number: 4 (lower is better)
Translates to: MGEADSTAVPIWTMGQGRGQLVN*ALLTLV
Trigger: GACTAGTGTCAGGAGTGCCCAGTTTACAAGTTGTCC...CCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CCA 90 bp CCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCAGAAACAAAATACACCCATaGCCATTCCCATCCTATCGC +
Preference number: 4 (lower is better)
Translates to: PPCLQLGGPGALVHGRSRNKIHP*PFPSYR
Trigger: GCGATAGGATGGGAATGGCCATGGGTGTATTTTGTT...TCTGCTTCTCCCATGTACCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288139.11
CDS-3UTR CCA 90 bp GCGCCGAGGGGCCTGTCAGTCTTTGGGAGTTCGGGCAAACTAGGGATGCAGGACAACAAAATACACCCATaGCCATTCCCATCCTATCGC +
Preference number: 4 (lower is better)
Translates to: APRGLSVFGSSGKLGMQDNKIHP*PFPSYR
Trigger: GCGATAGGATGGGAATGGCCATGGGTGTATTTTGTT...GTCCTGCATCCCTAGTTTGCCCGAACTCCCAAAGACTGACAGGCCCCTCGGCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR CCA 90 bp GCGCCGAGGGGCCTGTCAGTCTTTGGGAGTTCGGGCAAACTAGGGATGCAGGACCTGTGTCAACCAATCTaGCTGATTGTAGTGCTCAGA +
Preference number: 4 (lower is better)
Translates to: APRGLSVFGSSGKLGMQDLCQPI*LIVVLR
Trigger: TCTGAGCACTACAATCAGCCAGATTGGTTGACACAG...GTCCTGCATCCCTAGTTTGCCCGAACTCCCAAAGACTGACAGGCCCCTCGGCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR CCA 90 bp CCTCCTCACCCATCCTCTGTGAGAGGGCGGGGCCTGCTGTTTCCTGCAGCTGGGCCAAGAGGACTTTGTTaGCAATATCTTGAATCTGTG +
Preference number: 4 (lower is better)
Translates to: PPHPSSVRGRGLLFPAAGPRGLC*QYLESV
Trigger: CACAGATTCAAGATATTGCCAACAAAGTCCTCTTGG...CCCAGCTGCAGGAAACAGCAGGCCCCGCCCTCTCACAGAGGATGGGTGAGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CCA 90 bp CCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGAGACGAAATATGCTTaGAGGCCCAAGCTGTACATT +
Preference number: 4 (lower is better)
Translates to: PLTFPCTPPPCLQLGGPGETKYA*RPKLYI
Trigger: AATGTACAGCTTGGGCCTCCAAGCATATTTCGTCTC...ACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CCA 90 bp CCTTCCGGAGGAGTGCTTTGCTTGGAAGGGGTCTCCCTGGGGCCTTGGGTCTGCTCACTGTTGGCTATCTaGTTGACTTCTGGTTTGTTG +
Preference number: 4 (lower is better)
Translates to: PSGGVLCLEGVSLGPWVCSLLAI*LTSGLL
Trigger: CAACAAACCAGAAGTCAACCAGATAGCCAACAGTGA...GCAGACCCAAGGCCCCAGGGAGACCCCTTCCAAGCAAAGCACTCCTCCGGAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR CCA 90 bp GAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTGTTGGTGAAGATGTGGTaGTTGATGAGCTTGTGGCAG +
Preference number: 4 (lower is better)
Translates to: EKQTPQQCPSGQWGRAGLLVKMW*LMSLWQ
Trigger: CTGCCACAAGCTCATCAACCACCACATCTTCACCAA...CAGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CCA 90 bp AGCGCCGAGGGGCCTGTCAGTCTTTGGGAGTTCGGGCAAACTAGGGATGCAGGACAGAAGGCCCCTTTGTaGAGGAAAGCTCCAAAAGTT +
Preference number: 4 (lower is better)
Translates to: SAEGPVSLWEFGQTRDAGQKAPL*RKAPKV
Trigger: AACTTTTGGAGCTTTCCTCCACAAAGGGGCCTTCTG...TCCTGCATCCCTAGTTTGCCCGAACTCCCAAAGACTGACAGGCCCCTCGGCGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CCA 90 bp TCCACCTTCCGGAGGAGTGCTTTGCTTGGAAGGGGTCTCCCTGGGGCCTTGGGTCTTCAGGGTTACTTTTaGCTTCATCCGTACAGCGAT +
Preference number: 4 (lower is better)
Translates to: STFRRSALLGRGLPGALGLQGYF*LHPYSD
Trigger: ATCGCTGTACGGATGAAGCCAAAAGTAACCCTGAAG...ACCCAAGGCCCCAGGGAGACCCCTTCCAAGCAAAGCACTCCTCCGGAAGGTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CCA 90 bp ACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGCGGTGGTTGTAGATTaGGCCGATGTTCTCTCCATT +
Preference number: 4 (lower is better)
Translates to: TWEKQTPQQCPSGQWGRAAVVVD*ADVLSI
Trigger: AATGGAGAGAACATCGGCCCAATCTACAACCACCGC...TGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CCA 90 bp TCATCACCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGGCGGTGGTTGTAGATTaGGCCGATGTTCTCTCCATT +
Preference number: 4 (lower is better)
Translates to: SSPLTFPCTPPPCLQLGGAVVVD*ADVLSI
Trigger: AATGGAGAGAACATCGGCCCAATCTACAACCACCGC...CCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGGTGATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CCA 90 bp GGCCTTAGCCACAAACGCCTTCCGACTAACCAGCTTGGTGCCGTAGCTCAGGCAGCGGTGGTTGTAGATTaGGCCGATGTTCTCTCCATT +
Preference number: 4 (lower is better)
Translates to: GLSHKRLPTNQLGAVAQAAVVVD*ADVLSI
Trigger: AATGGAGAGAACATCGGCCCAATCTACAACCACCGC...TGCCTGAGCTACGGCACCAAGCTGGTTAGTCGGAAGGCGTTTGTGGCTAAGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636938.1
ENST00000638120.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CCA 90 bp CCTGGTACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCACTGGTAGGGGTTTTTaGGGATGTATCTCCGCAAGG +
Preference number: 4 (lower is better)
Translates to: PGTWEKQTPQQCPSGQWGTGRGF*GCISAR
Trigger: CCTTGCGGAGATACATCCCCAAAAACCCCTACCAGT...GCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTACCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CCA 90 bp GGAGGTCATGGCGGACTGGCATACAAAAGGAACTCTGTCAGCTCAGCGCCGAGGACTGGTAGGGGTTTTTaGGGATGTATCTCCGCAAGG +
Preference number: 4 (lower is better)
Translates to: GGHGGLAYKRNSVSSAPRTGRGF*GCISAR
Trigger: CCTTGCGGAGATACATCCCCAAAAACCCCTACCAGT...CCTCGGCGCTGAGCTGACAGAGTTCCTTTTGTATGCCAGTCCGCCATGACCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CCA 90 bp GGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCAGACTCCACAGCAGTGCCCATGCCTGGGGAAACGTCTaGAAGTTATTGTTCCTATTG +
Preference number: 4 (lower is better)
Translates to: GGPGALVHGRSRLHSSAHAWGNV*KLLFLL
Trigger: CAATAGGAACAATAACTTCCAGACGTTTCCCCAGGC...ATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTACCAGGGCACCAGGCCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CCA 90 bp GGCCTTAGCCACAAACGCCTTCCGACTAACCAGCTTGGTGCCGTAGCTCAGGCACTCATCATCACCAGCTaGAGGGACAACTTGGTCAAG +
Preference number: 4 (lower is better)
Translates to: GLSHKRLPTNQLGAVAQALIITS*RDNLVK
Trigger: CTTGACCAAGTTGTCCCTCCAGCTGGTGATGATGAG...TGCCTGAGCTACGGCACCAAGCTGGTTAGTCGGAAGGCGTTTGTGGCTAAGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636938.1
ENST00000638120.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CCA 90 bp CTTAAGCAGCACCACCAGTCCCCAGAGGACAAGAGCAGCTATATCTCATCCACCCAAGGTTCCCAATGCTaGGCCGCTTTCCATGGGCAG +
Preference number: 4 (lower is better)
Translates to: LKQHHQSPEDKSSYISSTQGSQC*AAFHGQ
Trigger: CTGCCCATGGAAAGCGGCCCAGCATTGGGAACCTTG...GGTGGATGAGATATAGCTGCTCTTGTCCTCTGGGGACTGGTGGTGCTGCTTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR CCA 90 bp ACCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGATAGCCATGTATCTCTaGGTCTTCCCGGCAAATAGT +
Preference number: 4 (lower is better)
Translates to: TFNFPLHPAAMPSVGWAWIAMYL*VFPANS
Trigger: ACTATTTGCCGGGAAGACCCAGAGATACATGGCTAT...CCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CCA 90 bp TCATCACCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGGTCGATGTTTCTGCCTaGGTATCTGCTGTAGTAGCC +
Preference number: 4 (lower is better)
Translates to: SSPLTFPCTPPPCLQLGGVDVSA*VSAVVA
Trigger: GGCTACTACAGCAGATACCCAGGCAGAAACATCGAC...CCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGGTGATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CCA 90 bp CCAAGGGGCAGAGCAGCCAGCTGGACCTGCTCTGTAATTCACTTACTTACTTACAAGGAGGATCTCCGGTaGGATGCTGGGGTGGGAGGT +
Preference number: 4 (lower is better)
Translates to: PRGRAASWTCSVIHLLTYKEDLR*DAGVGG
Trigger: ACCTCCCACCCCAGCATCCCACCGGAGATCCTCCTT...GTAAGTAAGTAAGTGAATTACAGAGCAGGTCCAGCTGGCTGCTCTGCCCCTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR CCA 90 bp CACCAGTCCCCAGAGGACAAGAGCAGCTATATCTCATCCACCTATGCATTTCTGAGGCTGCCGTTCACCTaGTCCAGGGCCTCTGACTGC +
Preference number: 4 (lower is better)
Translates to: HQSPEDKSSYISSTYAFLRLPFT*SRASDC
Trigger: GCAGTCAGAGGCCCTGGACCAGGTGAACGGCAGCCT...CAGAAATGCATAGGTGGATGAGATATAGCTGCTCTTGTCCTCTGGGGACTGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR CCA 90 bp ATACCCAAGGGGCAGAGCAGCCAGCTGGACCTGCTCTGTAATTCACTTACTTACCAGTCTGCCCCTCGCTaGGGGCTACAAGGTGGTGAT +
Preference number: 4 (lower is better)
Translates to: IPKGQSSQLDLLCNSLTYQSAPR*GLQGGD
Trigger: ATCACCACCTTGTAGCCCCCAGCGAGGGGCAGACTG...GTAAGTAAGTGAATTACAGAGCAGGTCCAGCTGGCTGCTCTGCCCCTTGGGTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR CCA 90 bp CAGACACTTAGGGTCCTGGTCTGGCAATTTTGGCCTGATGTGATGCCACAAGACGCTGTTTCCTGCAGCTaGGGCCGAGCGCATGGTACT +
Preference number: 4 (lower is better)
Translates to: QTLRVLVWQFWPDVMPQDAVSCS*GRAHGT
Trigger: AGTACCATGCGCTCGGCCCCAGCTGCAGGAAACAGC...GTCTTGTGGCATCACATCAGGCCAAAATTGCCAGACCAGGACCCTAAGTGTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR CCA 90 bp ATACCCAAGGGGCAGAGCAGCCAGCTGGACCTGCTCTGTAATTCACTTACTTACACAGCAGTGCCCATCTaGACAATGGGGCAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: IPKGQSSQLDLLCNSLTYTAVPI*TMGQGR
Trigger: CCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGT...GTAAGTAAGTGAATTACAGAGCAGGTCCAGCTGGCTGCTCTGCCCCTTGGGTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR CCA 90 bp CTTAAGCAGCACCACCAGTCCCCAGAGGACAAGAGCAGCTATATCTCATCCACCATGCCTTCAGTTGGGTaGGCCTGGTGCCCTGGTACA +
Preference number: 4 (lower is better)
Translates to: LKQHHQSPEDKSSYISSTMPSVG*AWCPGT
Trigger: TGTACCAGGGCACCAGGCCCACCCAACTGAAGGCAT...GGTGGATGAGATATAGCTGCTCTTGTCCTCTGGGGACTGGTGGTGCTGCTTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR CCA 90 bp ATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGGACAGTTGCAACCCATaGTGGATCCAAAGGTACAGT +
Preference number: 4 (lower is better)
Translates to: MGEADSTAVPIWTMGQGRDSCNP*WIQRYS
Trigger: ACTGTACCTTTGGATCCACCATGGGTTGCAACTGTC...CCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR CCA 90 bp GAAATGGCGCTCCCTGCGGCTGGTATTAGGTTACCATTGGCACCGAAGGAACCAGTCGGAGGCTCTCACTaGCAAATGACAGCTCTGTGC +
Preference number: 4 (lower is better)
Translates to: EMALPAAGIRLPLAPKEPVGGSH*QMTALC
Trigger: GCACAGAGCTGTCATTTGCCAGTGAGAGCCTCCGAC...TGGTTCCTTCGGTGCCAATGGTAACCTAATACCAGCCGCAGGGAGCGCCATTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR CCA 90 bp CGACACTCCAATCCTATAGATCACCACGTTGCTCCTCTGTCCCCAGCACCCCTTGTCGGAGGCTCTCACTaGCAAATGACAGCTCTGTGC +
Preference number: 4 (lower is better)
Translates to: RHSNPIDHHVAPLSPAPLVGGSH*QMTALC
Trigger: GCACAGAGCTGTCATTTGCCAGTGAGAGCCTCCGAC...AAGGGGTGCTGGGGACAGAGGAGCAACGTGGTGATCTATAGGATTGGAGTGTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR CCA 90 bp GGCCTTAGCCACAAACGCCTTCCGACTAACCAGCTTGGTGCCGTAGCTCAGGCAGAGGTCATGGCGGACTaGCATACAAAAGGAACTCTG +
Preference number: 4 (lower is better)
Translates to: GLSHKRLPTNQLGAVAQAEVMAD*HTKGTL
Trigger: CAGAGTTCCTTTTGTATGCCAGTCCGCCATGACCTC...TGCCTGAGCTACGGCACCAAGCTGGTTAGTCGGAAGGCGTTTGTGGCTAAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR TCA 90 bp CCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTTTCGGATGGGGTTATTaGGTGATAAACAGAAAAGGG +
Preference number: 4 (lower is better)
Translates to: PLTFPCTPPPCLQLGGPGFGWGY*VINRKG
Trigger: CCCTTTTCTGTTTATCACTCAATAACCCCATCCGAA...ACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR TCA 90 bp GCAGATGAGCCACGGCCCCGCTTCCACCTTCCGGAGGAGTGCTTTGCTTGGAAGTTCGGATGGGGTTATTaGGTGATAAACAGAAAAGGG +
Preference number: 4 (lower is better)
Translates to: ADEPRPRFHLPEECFAWKFGWGY*VINRKG
Trigger: CCCTTTTCTGTTTATCACTCAATAACCCCATCCGAA...CTTCCAAGCAAAGCACTCCTCCGGAAGGTGGAAGCGGGGCCGTGGCTCATCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR TCA 90 bp AGCCACAAACGCCTTCCGACTAACCAGCTTGGTGCCGTAGCTCAGGCAGAAAATTCCAGATTTGCCGCTTaGGTGGTTCCCGCCTTCTGT +
Preference number: 4 (lower is better)
Translates to: SHKRLPTNQLGAVAQAENSRFAA*VVPAFC
Trigger: ACAGAAGGCGGGAACCACTCAAGCGGCAAATCTGGA...ATTTTCTGCCTGAGCTACGGCACCAAGCTGGTTAGTCGGAAGGCGTTTGTGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR TCA 90 bp ACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAAGTGCCTGGTCACTTTaGAGATTCTTAAGAGGCGCA +
Preference number: 4 (lower is better)
Translates to: TWEKQTPQQCPSGQWGRASAWSL*RFLRGA
Trigger: TGCGCCTCTTAAGAATCTTCAAAGTGACCAGGCACT...TGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR TCA 90 bp ATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCAGACTCCAAGTGCCTGGTCACTTTaGAGATTCTTAAGAGGCGCA +
Preference number: 4 (lower is better)
Translates to: MPSVGWAWCPGTWEKQTPSAWSL*RFLRGA
Trigger: TGCGCCTCTTAAGAATCTTCAAAGTGACCAGGCACT...TGGAGTCTGCTTCTCCCATGTACCAGGGCACCAGGCCCACCCAACTGAAGGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR TCA 90 bp ACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGATCTGGAACACTGTaGGAAGTGCTTGAGGGAAAT +
Preference number: 4 (lower is better)
Translates to: TWEKQTPQQCPSGQWGRAGSGTL*EVLEGN
Trigger: ATTTCCCTCAAGCACTTCTCACAGTGTTCCAGATCC...TGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR TCA 90 bp GGAGGTCATGGCGGACTGGCATACAAAAGGAACTCTGTCAGCTCAGCGCCGAGGGGATCTGGAACACTGTaGGAAGTGCTTGAGGGAAAT +
Preference number: 4 (lower is better)
Translates to: GGHGGLAYKRNSVSSAPRGSGTL*EVLEGN
Trigger: ATTTCCCTCAAGCACTTCTCACAGTGTTCCAGATCC...CCTCGGCGCTGAGCTGACAGAGTTCCTTTTGTATGCCAGTCCGCCATGACCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR TCA 90 bp GGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCAGACTCCACAGCAGTGCCCATTGTTGGCTATCTGGTTaGCTTCTGGTTTGTTGTTCT +
Preference number: 4 (lower is better)
Translates to: GGPGALVHGRSRLHSSAHCWLSG*LLVCCS
Trigger: AGAACAACAAACCAGAAGTCAACCAGATAGCCAACA...ATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTACCAGGGCACCAGGCCCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR TCA 90 bp ATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGCATCCTTGTAGAGGATaGAAAGTCCCCTGCATTCTT +
Preference number: 4 (lower is better)
Translates to: MGEADSTAVPIWTMGQGRHPCRG*KVPCIL
Trigger: AAGAATGCAGGGGACTTTTCATCCTCTACAAGGATG...CCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR TCA 90 bp AGCGCCGAGGGGCCTGTCAGTCTTTGGGAGTTCGGGCAAACTAGGGATGCAGGACATCCTTGTAGAGGATaGAAAGTCCCCTGCATTCTT +
Preference number: 4 (lower is better)
Translates to: SAEGPVSLWEFGQTRDAGHPCRG*KVPCIL
Trigger: AAGAATGCAGGGGACTTTTCATCCTCTACAAGGATG...TCCTGCATCCCTAGTTTGCCCGAACTCCCAAAGACTGACAGGCCCCTCGGCGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR TCA 90 bp ATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGGGACGTTGTCGAAGTTaGAATCACTGTTTTGCCAGA +
Preference number: 4 (lower is better)
Translates to: MGEADSTAVPIWTMGQGRGRCRS*NHCFAR
Trigger: TCTGGCAAAACAGTGATTTCAACTTCGACAACGTCC...CCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR TCA 90 bp ATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCAGACTCCATGCGTCGAAGCAGAGTaGCCACATCAAGGTGTTTTA +
Preference number: 4 (lower is better)
Translates to: MPSVGWAWCPGTWEKQTPCVEAE*PHQGVL
Trigger: TAAAACACCTTGATGTGGTCACTCTGCTTCGACGCA...TGGAGTCTGCTTCTCCCATGTACCAGGGCACCAGGCCCACCCAACTGAAGGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR TCA 90 bp CGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCAGGGCACCATTTCTTTTaGACACATCATCTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: RRHAFSWVGLVPWYMGEAGHHFF*THHLLL
Trigger: AAGAAGAAGATGATGTGTTCAAAAGAAATGGTGCCC...TGCTTCTCCCATGTACCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR TCA 90 bp ACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGAGATTGGCATTTGTTaGGGTGGGAACTTGCTTTCC +
Preference number: 4 (lower is better)
Translates to: TWEKQTPQQCPSGQWGRAEIGIC*GGNLLS
Trigger: GGAAAGCAAGTTCCCACCTCAACAAATGCCAATCTC...TGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR TCA 90 bp TACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCGAGCTGTTCATCTCCTaGGTCGGACCTAATGTAAGT +
Preference number: 4 (lower is better)
Translates to: YMGEADSTAVPIWTMGQGELFIS*VGPNVS
Trigger: ACTTACATTAGGTCCGACTCAGGAGATGAACAGCTC...GCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR TCA 90 bp CGACACTCCAATCCTATAGATCACCACGTTGCTCCTCTGTCCCCAGCACCCCTTGGTCGAGTGACTCGGTaGGTACTTCTGGGCTTTACT +
Preference number: 4 (lower is better)
Translates to: RHSNPIDHHVAPLSPAPLGRVTR*VLLGFT
Trigger: AGTAAAGCCCAGAAGTACTCACCGAGTCACTCGACC...AAGGGGTGCTGGGGACAGAGGAGCAACGTGGTGATCTATAGGATTGGAGTGTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR TCA 90 bp CACCAGTCCCCAGAGGACAAGAGCAGCTATATCTCATCCACCTATGCATTTCTGCACGACCGGGTCGAGTaGCTCGGTGAGTACTTCTGG +
Preference number: 4 (lower is better)
Translates to: HQSPEDKSSYISSTYAFLHDRVE*LGEYFW
Trigger: CCAGAAGTACTCACCGAGTCACTCGACCCGGTCGTG...CAGAAATGCATAGGTGGATGAGATATAGCTGCTCTTGTCCTCTGGGGACTGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR TCA 90 bp CCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTCGTACAGTCAGAGTGTaGGTGCATTCTAATGAAAAC +
Preference number: 4 (lower is better)
Translates to: PLTFPCTPPPCLQLGGPGRTVRV*VHSNEN
Trigger: GTTTTCATTAGAATGCACTCACACTCTGACTGTACG...ACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR TCA 90 bp ACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGATTTTGAGATGGCTTaGCAGAGACTTCCACAGCAG +
Preference number: 4 (lower is better)
Translates to: TWEKQTPQQCPSGQWGRADFEMA*QRLPQQ
Trigger: CTGCTGTGGAAGTCTCTGTCAAGCCATCTCAAAATC...TGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350061.11
ENST00000422281.7
CDS-3UTR TCA 90 bp AGGTTTGGGTGTGGTGGTGTTTCCTGTGGACACGTTAAGATGGAACCTGAGGTGGAAAAAGAACCACCGTaGGCAACGTCCGCGACAGGC +
Preference number: 4 (lower is better)
Translates to: RFGCGGVSCGHVKMEPEVEKEPP*ATSATG
Trigger: GCCTGTCGCGGACGTTGCTCACGGTGGTTCTTTTTC...CACCTCAGGTTCCATCTTAACGTGTCCACAGGAAACACCACCACACCCAAACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000645528.2
CDS-3UTR GCA 90 bp AGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTGGAAAGAGGAAGTCTGGTaGCTCTTGCATAGTTTGCCT +
Preference number: 4 (lower is better)
Translates to: RSRLHSSAHLDNGAGQVWKEEVW*LLHSLP
Trigger: AGGCAAACTATGCAAGAGGCACCAGACTTCCTCTTT...CCAGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR GCA 90 bp TACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCCTCAGGGAAGTCCAGTaGCTGGTCACTTTGAAGATT +
Preference number: 4 (lower is better)
Translates to: YMGEADSTAVPIWTMGQGLREVQ*LVTLKI
Trigger: AATCTTCAAAGTGACCAGGCACTGGACTTCCCTGAG...GCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR GCA 90 bp CGACACTCCAATCCTATAGATCACCACGTTGCTCCTCTGTCCCCAGCACCCCTTAGGATGCCACTAAGTTaGTCAGGGAAGTCCAGTGCC +
Preference number: 4 (lower is better)
Translates to: RHSNPIDHHVAPLSPAPLRMPLS*SGKSSA
Trigger: GGCACTGGACTTCCCTGAGCAACTTAGTGGCATCCT...AAGGGGTGCTGGGGACAGAGGAGCAACGTGGTGATCTATAGGATTGGAGTGTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR GCA 90 bp GGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTGGAAATTGTCAAAGGTaGTCCGCTTGGTTTGCGTTT +
Preference number: 4 (lower is better)
Translates to: GEADSTAVPIWTMGQGRSGNCQR*SAWFAF
Trigger: AAACGCAAACCAAGCGGAGCACCTTTGACAATTTCC...AGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR GCA 90 bp CGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCAGAACACTGTGAGAAGTaGTTGAGGGAAATTGTCAAA +
Preference number: 4 (lower is better)
Translates to: RRHAFSWVGLVPWYMGEAEHCEK*LREIVK
Trigger: TTTGACAATTTCCCTCAAGCACTTCTCACAGTGTTC...TGCTTCTCCCATGTACCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR GCA 90 bp AGCGCCGAGGGGCCTGTCAGTCTTTGGGAGTTCGGGCAAACTAGGGATGCAGGATTGAAATCACTGTTTTaGCAGATCCGTTCACGGACC +
Preference number: 4 (lower is better)
Translates to: SAEGPVSLWEFGQTRDAGLKSLF*QIRSRT
Trigger: GGTCCGTGAACGGATCTGGCAAAACAGTGATTTCAA...TCCTGCATCCCTAGTTTGCCCGAACTCCCAAAGACTGACAGGCCCCTCGGCGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR GCA 90 bp ATACCCAAGGGGCAGAGCAGCCAGCTGGACCTGCTCTGTAATTCACTTACTTACCCAGGCCTCACCTGTTaGACACCTGAAGAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: IPKGQSSQLDLLCNSLTYPGLTC*TPEEQQ
Trigger: CTGCTGCTCTTCAGGTGTGCAACAGGTGAGGCCTGG...GTAAGTAAGTGAATTACAGAGCAGGTCCAGCTGGCTGCTCTGCCCCTTGGGTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR GCA 90 bp TCATCACCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGAGTTCTTCATTAGCTTaGTCCAGGTTCCCTTCGGTC +
Preference number: 4 (lower is better)
Translates to: SSPLTFPCTPPPCLQLGGSSSLA*SRFPSV
Trigger: GACCGAAGGGAACCTGGAGCAAGCTAATGAAGAACT...CCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGGTGATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR GCA 90 bp AACCGTAACTATGGATACCCAAGGGGCAGAGCAGCCAGCTGGACCTGCTCTGTATCTGGCCCAATGTCATaGAGTGTCCTTAATCCCGCC +
Preference number: 4 (lower is better)
Translates to: NRNYGYPRGRAASWTCSVSGPMS*SVLNPA
Trigger: GGCGGGATTAAGGACACTGCATGACATTGGGCCAGA...TACAGAGCAGGTCCAGCTGGCTGCTCTGCCCCTTGGGTATCCATAGTTACGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR GCA 90 bp ACCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTTCTGCCTGGGTATCTaGTGTAGTAGCCATAGTTTT +
Preference number: 4 (lower is better)
Translates to: TFNFPLHPAAMPSVGWAWFCLGI*CSSHSF
Trigger: AAAACTATGGCTACTACAGCAGATACCCAGGCAGAA...CCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR GCA 90 bp CACCAGTCCCCAGAGGACAAGAGCAGCTATATCTCATCCACCTATGCATTTCTGTCTTCCTGGCTGCTCTaGCGGCGCAGGCACTCAAAG +
Preference number: 4 (lower is better)
Translates to: HQSPEDKSSYISSTYAFLSSWLL*RRRHSK
Trigger: CTTTGAGTGCCTGCGCCGGCAGAGCAGCCAGGAAGA...CAGAAATGCATAGGTGGATGAGATATAGCTGCTCTTGTCCTCTGGGGACTGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR GCA 90 bp AGGAACCAGGAGGATAAGAATATCCATAATTTCAGAGCTGCCCTGGCACAGTACCTGTGTACCAGGAGCTaGGGTGCAGGGACGGCAGGC +
Preference number: 4 (lower is better)
Translates to: RNQEDKNIHNFRAALAQYLCTRS*GAGTAG
Trigger: GCCTGCCGTCCCTGCACCGCAGCTCCTGGTACACAG...GTACTGTGCCAGGGCAGCTCTGAAATTATGGATATTCTTATCCTCCTGGTTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR GCA 90 bp TTCCCAATGCTGGGCCGCTTTCCATGGGCAGCTTTGGACATATTGGCATTATTGGAGCGCATGGTACTCTaGCAGGCTCAACCGCTTGGG +
Preference number: 4 (lower is better)
Translates to: FPMLGRFPWAALDILALLERMVL*QAQPLG
Trigger: CCCAAGCGGTTGAGCCTGGCAGAGTACCATGCGCTC...CAATAATGCCAATATGTCCAAAGCTGCCCATGGAAAGCGGCCCAGCATTGGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636448.1
CDS-3UTR GCA 90 bp GACTTACTTACACACCGTATTTCAGAACAGCTAAACAGGAACCAGGACGCAGTGGGGCCTGCTGTTTCCTaGAGCTGGGGCCGAGCGCAT +
Preference number: 4 (lower is better)
Translates to: DLLTHRISEQLNRNQDAVGPAVS*SWGRAH
Trigger: ATGCGCTCGGCCCCAGCTGCAGGAAACAGCAGGCCC...CACTGCGTCCTGGTTCCTGTTTAGCTGTTCTGAAATACGGTGTGTAAGTAAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR GCA 90 bp TGCAGAGGCAGGGCCGTGCGATGGGGGAAGATGGGAGACGACGGGACCTCTTCCTTACCTGGTTGCGAGTaGATTATTATTCCAGTTTAC +
Preference number: 4 (lower is better)
Translates to: CRGRAVRWGKMGDDGTSSLPGCE*IIIPVY
Trigger: GTAAACTGGAATAATAATGCACTCGCAACCAGGTAA...GGAAGAGGTCCCGTCGTCTCCCATCTTCCCCCATCGCACGGCCCTGCCTCTGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636448.1
CDS-3UTR GCA 90 bp TTTCAAGGCCTTAGCCACAAACGCCTTCCGACTAACCAGCTTGGTGCCGTAGCTCTCTTCAGAGTTGTCTaGTTCGCTGAGGGCCACGTC +
Preference number: 4 (lower is better)
Translates to: FQGLSHKRLPTNQLGAVALFRVV*FAEGHV
Trigger: GACGTGGCCCTCAGCGAAGCAGACAACTCTGAAGAG...AGCTACGGCACCAAGCTGGTTAGTCGGAAGGCGTTTGTGGCTAAGGCCTTGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638120.1
CDS-3UTR CCA 90 bp AGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTGGCAGAAAGAGGAAGTCTaGTGCCTCTTGCATAGTTTG +
Preference number: 4 (lower is better)
Translates to: RSRLHSSAHLDNGAGQVWQKEEV*CLLHSL
Trigger: CAAACTATGCAAGAGGCACCAGACTTCCTCTTTCTG...CCAGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CCA 90 bp TCATCACCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGACAGGACAGTTTGCTTaGAGCTATTCGGCTGAGAAG +
Preference number: 4 (lower is better)
Translates to: SSPLTFPCTPPPCLQLGGTGQFA*SYSAEK
Trigger: CTTCTCAGCCGAATAGCTCCAAGCAAACTGTCCTGT...CCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGGTGATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CCA 90 bp CCTGGTACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCACAGGACAGTTTGCTTaGAGCTATTCGGCTGAGAAG +
Preference number: 4 (lower is better)
Translates to: PGTWEKQTPQQCPSGQWGTGQFA*SYSAEK
Trigger: CTTCTCAGCCGAATAGCTCCAAGCAAACTGTCCTGT...GCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTACCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CCA 90 bp CGACACTCCAATCCTATAGATCACCACGTTGCTCCTCTGTCCCCAGCACCCCTTCCATTGGCAGTACACTaGCGTCCATTCCCTGAGAAC +
Preference number: 4 (lower is better)
Translates to: RHSNPIDHHVAPLSPAPLPLAVH*RPFPEN
Trigger: GTTCTCAGGGAATGGACGCCAGTGTACTGCCAATGG...AAGGGGTGCTGGGGACAGAGGAGCAACGTGGTGATCTATAGGATTGGAGTGTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR CCA 90 bp GAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTGCTGTGTCAACCAATCTaGCTGATTGTAGTGCTCAGA +
Preference number: 4 (lower is better)
Translates to: EKQTPQQCPSGQWGRAGLLCQPI*LIVVLR
Trigger: TCTGAGCACTACAATCAGCCAGATTGGTTGACACAG...CAGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CCA 90 bp GCGCCGAGGGGCCTGTCAGTCTTTGGGAGTTCGGGCAAACTAGGGATGCAGGACGCAACAGCGAAGCGATaGACTTCATGGAGTTTAATA +
Preference number: 4 (lower is better)
Translates to: APRGLSVFGSSGKLGMQDATAKR*TSWSLI
Trigger: TATTAAACTCCATGAAGTCCATCGCTTCGCTGTTGC...GTCCTGCATCCCTAGTTTGCCCGAACTCCCAAAGACTGACAGGCCCCTCGGCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR CCA 90 bp GGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTAGGCTCTCTTTTCTaGCAATCTTTTTCCTCTCCT +
Preference number: 4 (lower is better)
Translates to: GGPGALVHGRSRLHSSAHLGSLF*QSFSSP
Trigger: AGGAGAGGAAAAAGATTGCCAGAAAAGAGAGCCTAG...ATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTACCAGGGCACCAGGCCCACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CCA 90 bp ACCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGCTAGGCTCTCTTTTCTaGCAATCTTTTTCCTCTCCT +
Preference number: 4 (lower is better)
Translates to: TFNFPLHPAAMPSVGWAWLGSLF*QSFSSP
Trigger: AGGAGAGGAAAAAGATTGCCAGAAAAGAGAGCCTAG...CCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CCA 90 bp CCTGGTACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCCAGAAGGCCCCTTTGTaGAGGAAAGCTCCAAAAGTT +
Preference number: 4 (lower is better)
Translates to: PGTWEKQTPQQCPSGQWGQKAPL*RKAPKV
Trigger: AACTTTTGGAGCTTTCCTCCACAAAGGGGCCTTCTG...GCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTACCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CCA 90 bp TTTCAAGGCCTTAGCCACAAACGCCTTCCGACTAACCAGCTTGGTGCCGTAGCTGCCACGAAGACGCACTaGACCACGTGCTTAAGTCCT +
Preference number: 4 (lower is better)
Translates to: FQGLSHKRLPTNQLGAVAATKTH*TTCLSP
Trigger: AGGACTTAAGCACGTGGTCCAGTGCGTCTTCGTGGC...AGCTACGGCACCAAGCTGGTTAGTCGGAAGGCGTTTGTGGCTAAGGCCTTGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CCA 90 bp GCTCCGCAGATGAGCCACGGCCCCGCTTCCACCTTCCGGAGGAGTGCTTTGCTTGGTTGTTATCTCTCATaGCAACTTTCCCAAACATCT +
Preference number: 4 (lower is better)
Translates to: APQMSHGPASTFRRSALLGCYLS*QLSQTS
Trigger: AGATGTTTGGGAAAGTTGCCATGAGAGATAACAACC...AAGCAAAGCACTCCTCCGGAAGGTGGAAGCGGGGCCGTGGCTCATCTGCGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CCA 90 bp GAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTGGCCTGGGGAAACGTCTaGAAGTTATTGTTCCTATTG +
Preference number: 4 (lower is better)
Translates to: EKQTPQQCPSGQWGRAGLAWGNV*KLLFLL
Trigger: CAATAGGAACAATAACTTCCAGACGTTTCCCCAGGC...CAGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CCA 90 bp AGCGCCGAGGGGCCTGTCAGTCTTTGGGAGTTCGGGCAAACTAGGGATGCAGGAGCCTGGGGAAACGTCTaGAAGTTATTGTTCCTATTG +
Preference number: 4 (lower is better)
Translates to: SAEGPVSLWEFGQTRDAGAWGNV*KLLFLL
Trigger: CAATAGGAACAATAACTTCCAGACGTTTCCCCAGGC...TCCTGCATCCCTAGTTTGCCCGAACTCCCAAAGACTGACAGGCCCCTCGGCGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CCA 90 bp AGCCACAAACGCCTTCCGACTAACCAGCTTGGTGCCGTAGCTCAGGCAGAAAATGTCACAGAGCTTCCCTaGGAGACAGGCCAGCATGAT +
Preference number: 4 (lower is better)
Translates to: SHKRLPTNQLGAVAQAENVTELP*ETGQHD
Trigger: ATCATGCTGGCCTGTCTCCCAGGGAAGCTCTGTGAC...ATTTTCTGCCTGAGCTACGGCACCAAGCTGGTTAGTCGGAAGGCGTTTGTGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000636938.1
ENST00000638120.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CCA 90 bp TCCTGTGGACACGTTAAGATGGAACCTGAGGTGTTGCCTGGATTGGTTTTGGCAAACCCCAGGGGAGGCTaGATGCGTCGAAGCAGAGTG +
Preference number: 4 (lower is better)
Translates to: SCGHVKMEPEVLPGLVLANPRGG*MRRSRV
Trigger: CACTCTGCTTCGACGCATCCAGCCTCCCCTGGGGTT...TGCCAAAACCAATCCAGGCAACACCTCAGGTTCCATCTTAACGTGTCCACAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CCA 90 bp CACCAGTCCCCAGAGGACAAGAGCAGCTATATCTCATCCACCTATGCATTTCTGGCAGGGGACGGTGGGTaGTATTGGTCTGCTGAAGGG +
Preference number: 4 (lower is better)
Translates to: HQSPEDKSSYISSTYAFLAGDGG*YWSAEG
Trigger: CCCTTCAGCAGACCAATACCACCCACCGTCCCCTGC...CAGAAATGCATAGGTGGATGAGATATAGCTGCTCTTGTCCTCTGGGGACTGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR CCA 90 bp TTCTTAAGCAGCACCACCAGTCCCCAGAGGACAAGAGCAGCTATATCTCATCCAGCAGGGGACGGTGGGTaGTATTGGTCTGCTGAAGGG +
Preference number: 4 (lower is better)
Translates to: FLSSTTSPQRTRAAISHPAGDGG*YWSAEG
Trigger: CCCTTCAGCAGACCAATACCACCCACCGTCCCCTGC...TGGATGAGATATAGCTGCTCTTGTCCTCTGGGGACTGGTGGTGCTGCTTAAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR CCA 90 bp GGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTTGGCATTTGTTGAGGTaGGAACTTGCTTTCCTATGG +
Preference number: 4 (lower is better)
Translates to: GEADSTAVPIWTMGQGRSWHLLR*ELAFLW
Trigger: CCATAGGAAAGCAAGTTCCCACCTCAACAAATGCCA...AGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CCA 90 bp CGTATTTCAGAACAGCTAAACAGGAACCAGGACGCAGTGTATTTGGGGGAAAGGAGGCTGCCGTTCACCTaGTCCAGGGCCTCTGACTGC +
Preference number: 4 (lower is better)
Translates to: RISEQLNRNQDAVYLGERRLPFT*SRASDC
Trigger: GCAGTCAGAGGCCCTGGACCAGGTGAACGGCAGCCT...CCTTTCCCCCAAATACACTGCGTCCTGGTTCCTGTTTAGCTGTTCTGAAATACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CCA 90 bp CCTCCTCACCCATCCTCTGTGAGAGGGCGGGGCCTGCTGTTTCCTGCAGCTGGGTTACTTACCAGAGGGTaGTTCAAGTCAAACAAACAA +
Preference number: 4 (lower is better)
Translates to: PPHPSSVRGRGLLFPAAGLLTRG*FKSNKQ
Trigger: TTGTTTGTTTGACTTGAACCACCCTCTGGTAAGTAA...CCCAGCTGCAGGAAACAGCAGGCCCCGCCCTCTCACAGAGGATGGGTGAGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR CCA 90 bp CTTAAGCAGCACCACCAGTCCCCAGAGGACAAGAGCAGCTATATCTCATCCACCGGCAGAGCAGCCAGCTaGACCTGCTCTGTAATTCAC +
Preference number: 4 (lower is better)
Translates to: LKQHHQSPEDKSSYISSTGRAAS*TCSVIH
Trigger: GTGAATTACAGAGCAGGTCCAGCTGGCTGCTCTGCC...GGTGGATGAGATATAGCTGCTCTTGTCCTCTGGGGACTGGTGGTGCTGCTTAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR CCA 90 bp AGCGCCGAGGGGCCTGTCAGTCTTTGGGAGTTCGGGCAAACTAGGGATGCAGGATGCAGGACTTTGGAATaGAGTCAGATACCCACCTTA +
Preference number: 4 (lower is better)
Translates to: SAEGPVSLWEFGQTRDAGCRTLE*SQIPTL
Trigger: TAAGGTGGGTATCTGACTCCATTCCAAAGTCCTGCA...TCCTGCATCCCTAGTTTGCCCGAACTCCCAAAGACTGACAGGCCCCTCGGCGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CCA 90 bp GAGCTTCCTGGCCTGTCCACTTCTCACTGTATTCTGGACTGGGTCTCTGCAGAGACGCTCAGGAGGTCATaGCGGACTGGCATACAAAAG +
Preference number: 4 (lower is better)
Translates to: ELPGLSTSHCILDWVSAETLRRS*RTGIQK
Trigger: CTTTTGTATGCCAGTCCGCCATGACCTCCTGAGCGT...CTCTGCAGAGACCCAGTCCAGAATACAGTGAGAAGTGGACAGGCCAGGAAGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR TCA 90 bp CCAAGGGGCAGAGCAGCCAGCTGGACCTGCTCTGTAATTCACTTACTTACTTACTCCAGATTTGCCGCTTaGGTGGTTCCCGCCTTCTGT +
Preference number: 4 (lower is better)
Translates to: PRGRAASWTCSVIHLLTYSRFAA*VVPAFC
Trigger: ACAGAAGGCGGGAACCACTCAAGCGGCAAATCTGGA...GTAAGTAAGTAAGTGAATTACAGAGCAGGTCCAGCTGGCTGCTCTGCCCCTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR TCA 90 bp GTGTATCTGAGCTTCCTGGCCTGTCCACTTCTCACTGTATTCTGGACTGGGTCTCCAGCATCTCGCAGGTaGACAGAGCCAAGAGGACTT +
Preference number: 4 (lower is better)
Translates to: VYLSFLACPLLTVFWTGSPASRR*TEPRGL
Trigger: AAGTCCTCTTGGCTCTGTTCACCTGCGAGATGCTGG...AGACCCAGTCCAGAATACAGTGAGAAGTGGACAGGCCAGGAAGCTCAGATACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR TCA 90 bp TTTCAAGGCCTTAGCCACAAACGCCTTCCGACTAACCAGCTTGGTGCCGTAGCTTCCCCAGGGGAGACATaGTTTCCAGTTCCACCAAGA +
Preference number: 4 (lower is better)
Translates to: FQGLSHKRLPTNQLGAVASPGET*FPVPPR
Trigger: TCTTGGTGGAACTGGAAATCATGTCTCCCCTGGGGA...AGCTACGGCACCAAGCTGGTTAGTCGGAAGGCGTTTGTGGCTAAGGCCTTGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR TCA 90 bp CAGTCCCCAGAGGACAAGAGCAGCTATATCTCATCCACCTATGCATTTCTGCACGCAGACGATCATTCCTaGAGAGGATGGGCCCCCGTA +
Preference number: 4 (lower is better)
Translates to: QSPEDKSSYISSTYAFLHADDHS*RGWAPV
Trigger: TACGGGGGCCCATCCTCTTCAGGAATGATCGTCTGC...GTGCAGAAATGCATAGGTGGATGAGATATAGCTGCTCTTGTCCTCTGGGGACTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR TCA 90 bp CGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCATTTTCTCCTTGTTCCTaGAATGTAACGATGACAAAG +
Preference number: 4 (lower is better)
Translates to: RRHAFSWVGLVPWYMGEAFSPCS*NVTMTK
Trigger: CTTTGTCATCGTTACATTTCAGGAACAAGGAGAAAA...TGCTTCTCCCATGTACCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR TCA 90 bp CCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTAAAGACGGAAAAAGGTaGTGGAGATTCTATTGCTCT +
Preference number: 4 (lower is better)
Translates to: PLTFPCTPPPCLQLGGPGKDGKR*WRFYCS
Trigger: AGAGCAATAGAATCTCCATCACCTTTTTCCGTCTTT...ACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR TCA 90 bp ACCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGAAAGACGGAAAAAGGTaGTGGAGATTCTATTGCTCT +
Preference number: 4 (lower is better)
Translates to: TFNFPLHPAAMPSVGWAWKDGKR*WRFYCS
Trigger: AGAGCAATAGAATCTCCATCACCTTTTTCCGTCTTT...CCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR TCA 90 bp ATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCAGACTCCAAGAAAACCTTATTTATaGGGTCCCATTGCCCTCGCA +
Preference number: 4 (lower is better)
Translates to: MPSVGWAWCPGTWEKQTPRKPYL*GPIALA
Trigger: TGCGAGGGCAATGGGACCTCATAAATAAGGTTTTCT...TGGAGTCTGCTTCTCCCATGTACCAGGGCACCAGGCCCACCCAACTGAAGGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR TCA 90 bp GAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTGCCAGAGGATTTTCGCTaGATAAATGAGAATTGGCTC +
Preference number: 4 (lower is better)
Translates to: EKQTPQQCPSGQWGRAGLPEDFR*INENWL
Trigger: GAGCCAATTCTCATTTATTCAGCGAAAATCCTCTGG...CAGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR TCA 90 bp GGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTTATCATCTATCTTTTTaGTTGCAGGGAATCCCTGCC +
Preference number: 4 (lower is better)
Translates to: GEADSTAVPIWTMGQGRSYHLSF*LQGIPA
Trigger: GGCAGGGATTCCCTGCAATCAAAAAGATAGATGATA...AGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR TCA 90 bp ATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCAGACTCCAGCTGAGTTTGGATTTTaGGATGGCTTGACAGAGACT +
Preference number: 4 (lower is better)
Translates to: MPSVGWAWCPGTWEKQTPAEFGF*DGLTET
Trigger: AGTCTCTGTCAAGCCATCTCAAAATCCAAACTCAGC...TGGAGTCTGCTTCTCCCATGTACCAGGGCACCAGGCCCACCCAACTGAAGGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350061.11
ENST00000422281.7
CDS-3UTR TCA 90 bp ACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGCTGAGTTTGGATTTTaGGATGGCTTGACAGAGACT +
Preference number: 4 (lower is better)
Translates to: TWEKQTPQQCPSGQWGRAAEFGF*DGLTET
Trigger: AGTCTCTGTCAAGCCATCTCAAAATCCAAACTCAGC...TGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350061.11
ENST00000422281.7
CDS-3UTR TCA 90 bp GCTCCGCAGATGAGCCACGGCCCCGCTTCCACCTTCCGGAGGAGTGCTTTGCTTTTCCTGCATTTCTTCTaGAATGCTGTTTCAGTAGAA +
Preference number: 4 (lower is better)
Translates to: APQMSHGPASTFRRSALLFLHFF*NAVSVE
Trigger: TTCTACTGAAACAGCATTTCAGAAGAAATGCAGGAA...AAGCAAAGCACTCCTCCGGAAGGTGGAAGCGGGGCCGTGGCTCATCTGCGGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR TCA 90 bp TCCTGTGGACACGTTAAGATGGAACCTGAGGTGTTGCCTGGATTGGTTTTGGCAGAAAAAGAACCACCGTaGGCAACGTCCGCGACAGGC +
Preference number: 4 (lower is better)
Translates to: SCGHVKMEPEVLPGLVLAEKEPP*ATSATG
Trigger: GCCTGTCGCGGACGTTGCTCACGGTGGTTCTTTTTC...TGCCAAAACCAATCCAGGCAACACCTCAGGTTCCATCTTAACGTGTCCACAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR TCA 90 bp GGTTCCCTGACTCCCAGTGTCCTTGAAACTAGACCACACTGCTTCCAAAGAGGCTCCCCAGACTGGCTCTaGGCACGAATTAAAGACGGA +
Preference number: 4 (lower is better)
Translates to: GSLTPSVLETRPHCFQRGSPDWL*ARIKDG
Trigger: TCCGTCTTTAATTCGTGCTCAGAGCCAGTCTGGGGA...GCCTCTTTGGAAGCAGTGTGGTCTAGTTTCAAGGACACTGGGAGTCAGGGAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000645528.2
CDS-3UTR GCA 90 bp AACCGTAACTATGGATACCCAAGGGGCAGAGCAGCCAGCTGGACCTGCTCTGTAAAGTCTGGTGCCTCTTaGATAGTTTGCCTCGTTCGC +
Preference number: 4 (lower is better)
Translates to: NRNYGYPRGRAASWTCSVKSGAS*IVCLVR
Trigger: GCGAACGAGGCAAACTATGCAAGAGGCACCAGACTT...TACAGAGCAGGTCCAGCTGGCTGCTCTGCCCCTTGGGTATCCATAGTTACGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR GCA 90 bp ACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAAAAGAGGAAGTCTGGTaGCTCTTGCATAGTTTGCCT +
Preference number: 4 (lower is better)
Translates to: TWEKQTPQQCPSGQWGRAKEEVW*LLHSLP
Trigger: AGGCAAACTATGCAAGAGGCACCAGACTTCCTCTTT...TGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR GCA 90 bp AACCGTAACTATGGATACCCAAGGGGCAGAGCAGCCAGCTGGACCTGCTCTGTATCTAGCAGCATCGATTaGAGCTTGCCAAGACAGGAC +
Preference number: 4 (lower is better)
Translates to: NRNYGYPRGRAASWTCSVSSSID*SLPRQD
Trigger: GTCCTGTCTTGGCAAGCTGCAATCGATGCTGCTAGA...TACAGAGCAGGTCCAGCTGGCTGCTCTGCCCCTTGGGTATCCATAGTTACGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR GCA 90 bp CTTAAGCAGCACCACCAGTCCCCAGAGGACAAGAGCAGCTATATCTCATCCACCTCCTACAGGTGGGGGTaGAGAGGTGCTCATAGTTTG +
Preference number: 4 (lower is better)
Translates to: LKQHHQSPEDKSSYISSTSYRWG*RGAHSL
Trigger: CAAACTATGAGCACCTCTGCACCCCCACCTGTAGGA...GGTGGATGAGATATAGCTGCTCTTGTCCTCTGGGGACTGGTGGTGCTGCTTAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR GCA 90 bp AGCCACAAACGCCTTCCGACTAACCAGCTTGGTGCCGTAGCTCAGGCAGAAAATCACTCCTACATTCCGTaGCATTGGCAGTACACTGGC +
Preference number: 4 (lower is better)
Translates to: SHKRLPTNQLGAVAQAENHSYIP*HWQYTG
Trigger: GCCAGTGTACTGCCAATGGCACGGAATGTAGGAGTG...ATTTTCTGCCTGAGCTACGGCACCAAGCTGGTTAGTCGGAAGGCGTTTGTGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR GCA 90 bp TCATCACCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGAAGAGAGACGAAATATaGTTGGAGGCCCAAGCTGTA +
Preference number: 4 (lower is better)
Translates to: SSPLTFPCTPPPCLQLGGKRDEI*LEAQAV
Trigger: TACAGCTTGGGCCTCCAAGCATATTTCGTCTCTCTT...CCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGGTGATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR GCA 90 bp TACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAAGAGAGACGAAATATaGTTGGAGGCCCAAGCTGTA +
Preference number: 4 (lower is better)
Translates to: YMGEADSTAVPIWTMGQGKRDEI*LEAQAV
Trigger: TACAGCTTGGGCCTCCAAGCATATTTCGTCTCTCTT...GCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR GCA 90 bp AACCGTAACTATGGATACCCAAGGGGCAGAGCAGCCAGCTGGACCTGCTCTGTATTGCCGCCAAACAGCTaGATCCCAAGCAAGGAAAAG +
Preference number: 4 (lower is better)
Translates to: NRNYGYPRGRAASWTCSVLPPNS*IPSKEK
Trigger: CTTTTCCTTGCTTGGGATGCAGCTGTTTGGCGGCAA...TACAGAGCAGGTCCAGCTGGCTGCTCTGCCCCTTGGGTATCCATAGTTACGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR GCA 90 bp CCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGTGCTCCGCTTGGTTTaGGTTTCATCAAAATTAAAC +
Preference number: 4 (lower is better)
Translates to: PLTFPCTPPPCLQLGGPGVLRLV*VSSKLN
Trigger: GTTTAATTTTGATGAAACGCAAACCAAGCGGAGCAC...ACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR GCA 90 bp TCCTGTGGACACGTTAAGATGGAACCTGAGGTGTTGCCTGGATTGGTTTTGGCACCAGGCCTCACCTGTTaGACACCTGAAGAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: SCGHVKMEPEVLPGLVLAPGLTC*TPEEQQ
Trigger: CTGCTGCTCTTCAGGTGTGCAACAGGTGAGGCCTGG...TGCCAAAACCAATCCAGGCAACACCTCAGGTTCCATCTTAACGTGTCCACAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR GCA 90 bp AGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTGGAGACAATGGCAAAGTTaGTCCCACATGTATACTCCT +
Preference number: 4 (lower is better)
Translates to: RSRLHSSAHLDNGAGQVWRQWQS*SHMYTP
Trigger: AGGAGTATACATGTGGGAGCAACTTTGCCATTGTCT...CCAGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR GCA 90 bp ATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGGTTGAGGTGGGAACTTaGTTTCCTATGGAATTATGG +
Preference number: 4 (lower is better)
Translates to: MGEADSTAVPIWTMGQGRVEVGT*FPMELW
Trigger: CCATAATTCCATAGGAAAGCAAGTTCCCACCTCAAC...CCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR GCA 90 bp GGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTTTCTGCCTGGGTATCTaGTGTAGTAGCCATAGTTTT +
Preference number: 4 (lower is better)
Translates to: GEADSTAVPIWTMGQGRSFCLGI*CSSHSF
Trigger: AAAACTATGGCTACTACAGCAGATACCCAGGCAGAA...AGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR GCA 90 bp CGACACTCCAATCCTATAGATCACCACGTTGCTCCTCTGTCCCCAGCACCCCTTGCCATGATCTGTTGCTaGATTAGATGCAGAGGCAGG +
Preference number: 4 (lower is better)
Translates to: RHSNPIDHHVAPLSPAPLAMICC*IRCRGR
Trigger: CCTGCCTCTGCATCTAATGCAGCAACAGATCATGGC...AAGGGGTGCTGGGGACAGAGGAGCAACGTGGTGATCTATAGGATTGGAGTGTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR GCA 90 bp CGTATTTCAGAACAGCTAAACAGGAACCAGGACGCAGTGTATTTGGGGGAAAGGGTTGGGTGGGCCTGGTaGCCTGGTACATGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: RISEQLNRNQDAVYLGERVGWAW*PGTWEK
Trigger: CTTCTCCCATGTACCAGGGCACCAGGCCCACCCAAC...CCTTTCCCCCAAATACACTGCGTCCTGGTTCCTGTTTAGCTGTTCTGAAATACG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR GCA 90 bp TCATCACCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGTATCTCATCCACCTATaGATTTCTGCACCAGCGATG +
Preference number: 4 (lower is better)
Translates to: SSPLTFPCTPPPCLQLGGYLIHL*ISAPAM
Trigger: CATCGCTGGTGCAGAAATGCATAGGTGGATGAGATA...CCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGGTGATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR GCA 90 bp GAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTGATCTATCTTTTTGATTaGAGGGAATCCCTGCCAAGG +
Preference number: 4 (lower is better)
Translates to: EKQTPQQCPSGQWGRAGLIYLFD*RESLPR
Trigger: CCTTGGCAGGGATTCCCTGCAATCAAAAAGATAGAT...CAGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR GCA 90 bp GGAGGTCATGGCGGACTGGCATACAAAAGGAACTCTGTCAGCTCAGCGCCGAGGTGTGAAAATGCAACCTaGAGGGTTACCTCTGTTGAC +
Preference number: 4 (lower is better)
Translates to: GGHGGLAYKRNSVSSAPRCENAT*RVTSVD
Trigger: GTCAACAGAGGTAACCCTGCAGGTTGCATTTTCACA...CCTCGGCGCTGAGCTGACAGAGTTCCTTTTGTATGCCAGTCCGCCATGACCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636938.1
CDS-3UTR GCA 90 bp TCCACCTTCCGGAGGAGTGCTTTGCTTGGAAGGGGTCTCCCTGGGGCCTTGGGTCTTCTGCATTACCTCTaGACTATGGCTACTTTGAAT +
Preference number: 4 (lower is better)
Translates to: STFRRSALLGRGLPGALGLLHYL*TMATLN
Trigger: ATTCAAAGTAGCCATAGTGCAGAGGTAATGCAGAAG...ACCCAAGGCCCCAGGGAGACCCCTTCCAAGCAAAGCACTCCTCCGGAAGGTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636938.1
CDS-3UTR CCA 90 bp GTTAAGCTTTGTACGTTCCCTTTCACGAAAAAGAACCACCGTGAGCAACGTCCGTTTGCCTCGTTCGCGTaGTCCGCTTGCTGCTGCCGT +
Preference number: 4 (lower is better)
Translates to: VKLCTFPFTKKNHREQRPFASFA*SACCCR
Trigger: ACGGCAGCAGCAAGCGGACCACGCGAACGAGGCAAA...CGGACGTTGCTCACGGTGGTTCTTTTTCGTGAAAGGGAACGTACAAAGCTTAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR CCA 90 bp GGAGGTCATGGCGGACTGGCATACAAAAGGAACTCTGTCAGCTCAGCGCCGAGGCAGAAAGAGGAAGTCTaGTGCCTCTTGCATAGTTTG +
Preference number: 4 (lower is better)
Translates to: GGHGGLAYKRNSVSSAPRQKEEV*CLLHSL
Trigger: CAAACTATGCAAGAGGCACCAGACTTCCTCTTTCTG...CCTCGGCGCTGAGCTGACAGAGTTCCTTTTGTATGCCAGTCCGCCATGACCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR CCA 90 bp GAGCTTCCTGGCCTGTCCACTTCTCACTGTATTCTGGACTGGGTCTCTGCAGAGGATTTGCCGCTTGAGTaGTTCCCGCCTTCTGTTTCT +
Preference number: 4 (lower is better)
Translates to: ELPGLSTSHCILDWVSAEDLPLE*FPPSVS
Trigger: AGAAACAGAAGGCGGGAACCACTCAAGCGGCAAATC...CTCTGCAGAGACCCAGTCCAGAATACAGTGAGAAGTGGACAGGCCAGGAAGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR CCA 90 bp ATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCAGACTCCACTGTGTCAACCAATCTaGCTGATTGTAGTGCTCAGA +
Preference number: 4 (lower is better)
Translates to: MPSVGWAWCPGTWEKQTPLCQPI*LIVVLR
Trigger: TCTGAGCACTACAATCAGCCAGATTGGTTGACACAG...TGGAGTCTGCTTCTCCCATGTACCAGGGCACCAGGCCCACCCAACTGAAGGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CCA 90 bp ATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCAGACTCCAGAGACGAAATATGCTTaGAGGCCCAAGCTGTACATT +
Preference number: 4 (lower is better)
Translates to: MPSVGWAWCPGTWEKQTPETKYA*RPKLYI
Trigger: AATGTACAGCTTGGGCCTCCAAGCATATTTCGTCTC...TGGAGTCTGCTTCTCCCATGTACCAGGGCACCAGGCCCACCCAACTGAAGGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CCA 90 bp GAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTGCAAAGGTGCTCCGCTTaGTTTGCGTTTCATCAAAAT +
Preference number: 4 (lower is better)
Translates to: EKQTPQQCPSGQWGRAGLQRCSA*FAFHQN
Trigger: ATTTTGATGAAACGCAAACCAAGCGGAGCACCTTTG...CAGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CCA 90 bp GGAGGTCATGGCGGACTGGCATACAAAAGGAACTCTGTCAGCTCAGCGCCGAGGTCTTCACAACGGAGATaGCACTGGATTGAATCCCAA +
Preference number: 4 (lower is better)
Translates to: GGHGGLAYKRNSVSSAPRSSQRR*HWIESQ
Trigger: TTGGGATTCAATCCAGTGCCATCTCCGTTGTGAAGA...CCTCGGCGCTGAGCTGACAGAGTTCCTTTTGTATGCCAGTCCGCCATGACCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CCA 90 bp GAGCTTCCTGGCCTGTCCACTTCTCACTGTATTCTGGACTGGGTCTCTGCAGAGTTCCCCTTGAACAACTaGACCCCGATACAGGCAAAC +
Preference number: 4 (lower is better)
Translates to: ELPGLSTSHCILDWVSAEFPLNN*TPIQAN
Trigger: GTTTGCCTGTATCGGGGTCCAGTTGTTCAAGGGGAA...CTCTGCAGAGACCCAGTCCAGAATACAGTGAGAAGTGGACAGGCCAGGAAGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CCA 90 bp CCTGGTACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCCTTCAGGGTTACTTTTaGCTTCATCCGTACAGCGAT +
Preference number: 4 (lower is better)
Translates to: PGTWEKQTPQQCPSGQWGLQGYF*LHPYSD
Trigger: ATCGCTGTACGGATGAAGCCAAAAGTAACCCTGAAG...GCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTACCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CCA 90 bp ACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGCCTGGGGAAACGTCTaGAAGTTATTGTTCCTATTG +
Preference number: 4 (lower is better)
Translates to: TWEKQTPQQCPSGQWGRAAWGNV*KLLFLL
Trigger: CAATAGGAACAATAACTTCCAGACGTTTCCCCAGGC...TGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CCA 90 bp GGCCTTAGCCACAAACGCCTTCCGACTAACCAGCTTGGTGCCGTAGCTCAGGCAGCCTGGGGAAACGTCTaGAAGTTATTGTTCCTATTG +
Preference number: 4 (lower is better)
Translates to: GLSHKRLPTNQLGAVAQAAWGNV*KLLFLL
Trigger: CAATAGGAACAATAACTTCCAGACGTTTCCCCAGGC...TGCCTGAGCTACGGCACCAAGCTGGTTAGTCGGAAGGCGTTTGTGGCTAAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000636938.1
ENST00000638120.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CCA 90 bp GTTAAGCTTTGTACGTTCCCTTTCACGAAAAAGAACCACCGTGAGCAACGTCCGAACCCCAGGGGAGGCTaGATGCGTCGAAGCAGAGTG +
Preference number: 4 (lower is better)
Translates to: VKLCTFPFTKKNHREQRPNPRGG*MRRSRV
Trigger: CACTCTGCTTCGACGCATCCAGCCTCCCCTGGGGTT...CGGACGTTGCTCACGGTGGTTCTTTTTCGTGAAAGGGAACGTACAAAGCTTAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CCA 90 bp TACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCGCTGGAGGGACAACTTaGTCAAGTAATTTCATGCTG +
Preference number: 4 (lower is better)
Translates to: YMGEADSTAVPIWTMGQGAGGTT*SSNFML
Trigger: CAGCATGAAATTACTTGACCAAGTTGTCCCTCCAGC...GCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CCA 90 bp GGCCTTAGCCACAAACGCCTTCCGACTAACCAGCTTGGTGCCGTAGCTCAGGCAGCTGGAGGGACAACTTaGTCAAGTAATTTCATGCTG +
Preference number: 4 (lower is better)
Translates to: GLSHKRLPTNQLGAVAQAAGGTT*SSNFML
Trigger: CAGCATGAAATTACTTGACCAAGTTGTCCCTCCAGC...TGCCTGAGCTACGGCACCAAGCTGGTTAGTCGGAAGGCGTTTGTGGCTAAGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636938.1
ENST00000638120.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CCA 90 bp ATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCAGACTCCATGGCATTTGTTGAGGTaGGAACTTGCTTTCCTATGG +
Preference number: 4 (lower is better)
Translates to: MPSVGWAWCPGTWEKQTPWHLLR*ELAFLW
Trigger: CCATAGGAAAGCAAGTTCCCACCTCAACAAATGCCA...TGGAGTCTGCTTCTCCCATGTACCAGGGCACCAGGCCCACCCAACTGAAGGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CCA 90 bp CACCAGTCCCCAGAGGACAAGAGCAGCTATATCTCATCCACCTATGCATTTCTGTTTGCCTGCTCCAGGTaGGCGAGCTGTCATCCTCGT +
Preference number: 4 (lower is better)
Translates to: HQSPEDKSSYISSTYAFLFACSR*ASCHPR
Trigger: ACGAGGATGACAGCTCGCCCACCTGGAGCAGGCAAA...CAGAAATGCATAGGTGGATGAGATATAGCTGCTCTTGTCCTCTGGGGACTGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR CCA 90 bp TCATCACCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCTCGGTGAGTACTTCTaGGCTTTACTTGAATCTAGG +
Preference number: 4 (lower is better)
Translates to: SSPLTFPCTPPPCLQLGGLGEYF*ALLESR
Trigger: CCTAGATTCAAGTAAAGCCCAGAAGTACTCACCGAG...CCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGGTGATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CCA 90 bp CAGACACTTAGGGTCCTGGTCTGGCAATTTTGGCCTGATGTGATGCCACAAGACGACAGTCAGGCTGGCTaGTGTGAAAGTCCGGTAGGA +
Preference number: 4 (lower is better)
Translates to: QTLRVLVWQFWPDVMPQDDSQAG*CESPVG
Trigger: TCCTACCGGACTTTCACACCAGCCAGCCTGACTGTC...GTCTTGTGGCATCACATCAGGCCAAAATTGCCAGACCAGGACCCTAAGTGTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR CCA 90 bp CGTATTTCAGAACAGCTAAACAGGAACCAGGACGCAGTGTATTTGGGGGAAAGGTGTTCCGGAAGCTGCTaGGGACAGTCAGGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: RISEQLNRNQDAVYLGERCSGSC*GQSGWL
Trigger: CAGCCAGCCTGACTGTCCCCAGCAGCTTCCGGAACA...CCTTTCCCCCAAATACACTGCGTCCTGGTTCCTGTTTAGCTGTTCTGAAATACG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CCA 90 bp CAGTCCCCAGAGGACAAGAGCAGCTATATCTCATCCACCTATGCATTTCTGCACCCAGGCTCAACCGCTTaGGACCTGTTCCTACCAGGT +
Preference number: 4 (lower is better)
Translates to: QSPEDKSSYISSTYAFLHPGSTA*DLFLPG
Trigger: ACCTGGTAGGAACAGGTCCCAAGCGGTTGAGCCTGG...GTGCAGAAATGCATAGGTGGATGAGATATAGCTGCTCTTGTCCTCTGGGGACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR CCA 90 bp ATACCCAAGGGGCAGAGCAGCCAGCTGGACCTGCTCTGTAATTCACTTACTTACTGGTGCCCTGGTACATaGGAGAAGCAGACTCCACAG +
Preference number: 4 (lower is better)
Translates to: IPKGQSSQLDLLCNSLTYWCPGT*EKQTPQ
Trigger: CTGTGGAGTCTGCTTCTCCCATGTACCAGGGCACCA...GTAAGTAAGTGAATTACAGAGCAGGTCCAGCTGGCTGCTCTGCCCCTTGGGTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR CCA 90 bp CAGACACTTAGGGTCCTGGTCTGGCAATTTTGGCCTGATGTGATGCCACAAGACATTTCAGAGCTGCCCTaGCACAGTACCTGCCCTGTC +
Preference number: 4 (lower is better)
Translates to: QTLRVLVWQFWPDVMPQDISELP*HSTCPV
Trigger: GACAGGGCAGGTACTGTGCCAGGGCAGCTCTGAAAT...GTCTTGTGGCATCACATCAGGCCAAAATTGCCAGACCAGGACCCTAAGTGTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR CCA 90 bp AACCGTAACTATGGATACCCAAGGGGCAGAGCAGCCAGCTGGACCTGCTCTGTAAGACACTTAGGGTCCTaGTCTGGCAATTTTGGCCTG +
Preference number: 4 (lower is better)
Translates to: NRNYGYPRGRAASWTCSVRHLGS*SGNFGL
Trigger: CAGGCCAAAATTGCCAGACCAGGACCCTAAGTGTCT...TACAGAGCAGGTCCAGCTGGCTGCTCTGCCCCTTGGGTATCCATAGTTACGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR CCA 90 bp GAGCTTCCTGGCCTGTCCACTTCTCACTGTATTCTGGACTGGGTCTCTGCAGAGGTGGACACGTTAAGATaGAACCTGAGGTGTTGCCTG +
Preference number: 4 (lower is better)
Translates to: ELPGLSTSHCILDWVSAEVDTLR*NLRCCL
Trigger: CAGGCAACACCTCAGGTTCCATCTTAACGTGTCCAC...CTCTGCAGAGACCCAGTCCAGAATACAGTGAGAAGTGGACAGGCCAGGAAGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CCA 90 bp CCTTCCGGAGGAGTGCTTTGCTTGGAAGGGGTCTCCCTGGGGCCTTGGGTCTGCTATCGACCAACATCTTaGGCAAAAATCTGCTATTCT +
Preference number: 4 (lower is better)
Translates to: PSGGVLCLEGVSLGPWVCYRPTS*AKICYS
Trigger: AGAATAGCAGATTTTTGCCCAAGATGTTGGTCGATA...GCAGACCCAAGGCCCCAGGGAGACCCCTTCCAAGCAAAGCACTCCTCCGGAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000636938.1
CDS-3UTR TCA 90 bp GAAATGGCGCTCCCTGCGGCTGGTATTAGGTTACCATTGGCACCGAAGGAACCACTCTTGGCGTATTGCTaGCGTTTTCTTTGGGAGAGA +
Preference number: 4 (lower is better)
Translates to: EMALPAAGIRLPLAPKEPLLAYC*RFLWER
Trigger: TCTCTCCCAAAGAAAACGTCAGCAATACGCCAAGAG...TGGTTCCTTCGGTGCCAATGGTAACCTAATACCAGCCGCAGGGAGCGCCATTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR TCA 90 bp TACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCTTCGGATGGGGTTATTaGGTGATAAACAGAAAAGGG +
Preference number: 4 (lower is better)
Translates to: YMGEADSTAVPIWTMGQGFGWGY*VINRKG
Trigger: CCCTTTTCTGTTTATCACTCAATAACCCCATCCGAA...GCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR TCA 90 bp GACTTACTTACACACCGTATTTCAGAACAGCTAAACAGGAACCAGGACGCAGTGCTGGCGTCCATTCCCTaGGAACGCACATGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: DLLTHRISEQLNRNQDAVLASIP*ERTWSW
Trigger: CCAGCTCCATGTGCGTTCTCAGGGAATGGACGCCAG...CACTGCGTCCTGGTTCCTGTTTAGCTGTTCTGAAATACGGTGTGTAAGTAAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR TCA 90 bp CAGGACTTTGGAATGGAGTCAGATACCCACCTTAGGCAGGTCTGCTTAATCTTTCTGGCGTCCATTCCCTaGGAACGCACATGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: QDFGMESDTHLRQVCLIFLASIP*ERTWSW
Trigger: CCAGCTCCATGTGCGTTCTCAGGGAATGGACGCCAG...AAAGATTAAGCAGACCTGCCTAAGGTGGGTATCTGACTCCATTCCAAAGTCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR TCA 90 bp TTCTTAAGCAGCACCACCAGTCCCCAGAGGACAAGAGCAGCTATATCTCATCCATCTCGCCTTCACCGCTaGCGTTCTCTGTGTTCACAG +
Preference number: 4 (lower is better)
Translates to: FLSSTTSPQRTRAAISHPSRLHR*RSLCSQ
Trigger: CTGTGAACACAGAGAACGTCAGCGGTGAAGGCGAGA...TGGATGAGATATAGCTGCTCTTGTCCTCTGGGGACTGGTGGTGCTGCTTAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR TCA 90 bp CACTCTCTGGACTTTCTGGAGACACTAGCATTAAAACCAAAGCACTGGCCAAGGGATTTTGAGATGGCTTaGCCCCACCGCCGACACCCA +
Preference number: 4 (lower is better)
Translates to: HSLDFLETLALKPKHWPRDFEMA*PHRRHP
Trigger: TGGGTGTCGGCGGTGGGGTCAAGCCATCTCAAAATC...CCTTGGCCAGTGCTTTGGTTTTAATGCTAGTGTCTCCAGAAAGTCCAGAGAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000636627.1
CDS-3UTR TCA 90 bp ACTGGCGTCACATCACAGAAAACCTTATTTATGAGGTCCCATTGCCCTCGCAATCCAGCCAGTAAAACGTaGCAGACTTCACGGCGGCCC +
Preference number: 4 (lower is better)
Translates to: TGVTSQKTLFMRSHCPRNPASKT*QTSRRP
Trigger: GGGCCGCCGTGAAGTCTGTCACGTTTTACTGGCTGG...ATTGCGAGGGCAATGGGACCTCATAAATAAGGTTTTCTGTGATGTGACGCCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR TCA 90 bp GTGTATCTGAGCTTCCTGGCCTGTCCACTTCTCACTGTATTCTGGACTGGGTCTTCCCCAGGGGAGACATaGTTTCCAGTTCCACCAAGA +
Preference number: 4 (lower is better)
Translates to: VYLSFLACPLLTVFWTGSSPGET*FPVPPR
Trigger: TCTTGGTGGAACTGGAAATCATGTCTCCCCTGGGGA...AGACCCAGTCCAGAATACAGTGAGAAGTGGACAGGCCAGGAAGCTCAGATACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR TCA 90 bp CACTCTCTGGACTTTCTGGAGACACTAGCATTAAAACCAAAGCACTGGCCAAGGGGCCCCCGTAAGCCATaGTGCCATCGTACATCACAG +
Preference number: 4 (lower is better)
Translates to: HSLDFLETLALKPKHWPRGPRKP*CHRTSQ
Trigger: CTGTGATGTACGATGGCATCATGGCTTACGGGGGCC...CCTTGGCCAGTGCTTTGGTTTTAATGCTAGTGTCTCCAGAAAGTCCAGAGAGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000636627.1
CDS-3UTR TCA 90 bp GTTAAGCTTTGTACGTTCCCTTTCACGAAAAAGAACCACCGTGAGCAACGTCCGGCAGACGATCATTCCTaGAGAGGATGGGCCCCCGTA +
Preference number: 4 (lower is better)
Translates to: VKLCTFPFTKKNHREQRPADDHS*RGWAPV
Trigger: TACGGGGGCCCATCCTCTTCAGGAATGATCGTCTGC...CGGACGTTGCTCACGGTGGTTCTTTTTCGTGAAAGGGAACGTACAAAGCTTAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR TCA 90 bp TCCCTTTCACGAAAAAGAACCACCGTGAGCAACGTCCGCGACAGGCAGCCCTGGTGTTGGCTATCTGGTTaGCTTCTGGTTTGTTGTTCT +
Preference number: 4 (lower is better)
Translates to: SLSRKRTTVSNVRDRQPWCWLSG*LLVCCS
Trigger: AGAACAACAAACCAGAAGTCAACCAGATAGCCAACA...CCAGGGCTGCCTGTCGCGGACGTTGCTCACGGTGGTTCTTTTTCGTGAAAGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR TCA 90 bp TCCACCTTCCGGAGGAGTGCTTTGCTTGGAAGGGGTCTCCCTGGGGCCTTGGGTTTTTCTCCTTGTTCCTaGAATGTAACGATGACAAAG +
Preference number: 4 (lower is better)
Translates to: STFRRSALLGRGLPGALGFSPCS*NVTMTK
Trigger: CTTTGTCATCGTTACATTTCAGGAACAAGGAGAAAA...ACCCAAGGCCCCAGGGAGACCCCTTCCAAGCAAAGCACTCCTCCGGAAGGTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR TCA 90 bp GAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTGAAAGACGGAAAAAGGTaGTGGAGATTCTATTGCTCT +
Preference number: 4 (lower is better)
Translates to: EKQTPQQCPSGQWGRAGLKDGKR*WRFYCS
Trigger: AGAGCAATAGAATCTCCATCACCTTTTTCCGTCTTT...CAGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR TCA 90 bp ATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCAGACTCCAAATTCATCTAAATGGTaGGGCCCCAAAATAGACCAG +
Preference number: 4 (lower is better)
Translates to: MPSVGWAWCPGTWEKQTPNSSKW*GPKIDQ
Trigger: CTGGTCTATTTTGGGGCCTCACCATTTAGATGAATT...TGGAGTCTGCTTCTCCCATGTACCAGGGCACCAGGCCCACCCAACTGAAGGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR TCA 90 bp TCCCTTTCACGAAAAAGAACCACCGTGAGCAACGTCCGCGACAGGCAGCCCTGGAATTCATCTAAATGGTaGGGCCCCAAAATAGACCAG +
Preference number: 4 (lower is better)
Translates to: SLSRKRTTVSNVRDRQPWNSSKW*GPKIDQ
Trigger: CTGGTCTATTTTGGGGCCTCACCATTTAGATGAATT...CCAGGGCTGCCTGTCGCGGACGTTGCTCACGGTGGTTCTTTTTCGTGAAAGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR TCA 90 bp TGCAACCCATGGTGGATCCAAAGGTACAGTATCAAAATCATGGAACTCTTGCCCCACGACCGGGTCGAGTaGCTCGGTGAGTACTTCTGG +
Preference number: 4 (lower is better)
Translates to: CNPWWIQRYSIKIMELLPHDRVE*LGEYFW
Trigger: CCAGAAGTACTCACCGAGTCACTCGACCCGGTCGTG...GGGCAAGAGTTCCATGATTTTGATACTGTACCTTTGGATCCACCATGGGTTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR TCA 90 bp TTCTTAAGCAGCACCACCAGTCCCCAGAGGACAAGAGCAGCTATATCTCATCCATCAGGCTGGCTGGTGTaGAAGTCCGGTAGGAGATGT +
Preference number: 4 (lower is better)
Translates to: FLSSTTSPQRTRAAISHPSGWLV*KSGRRC
Trigger: ACATCTCCTACCGGACTTTCACACCAGCCAGCCTGA...TGGATGAGATATAGCTGCTCTTGTCCTCTGGGGACTGGTGGTGCTGCTTAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR TCA 90 bp CGTATTTCAGAACAGCTAAACAGGAACCAGGACGCAGTGTATTTGGGGGAAAGGCCATCTCGTCGATGGTaGGGTCACAGGCATCAGCGA +
Preference number: 4 (lower is better)
Translates to: RISEQLNRNQDAVYLGERPSRRW*GHRHQR
Trigger: TCGCTGATGCCTGTGACCTCACCATCGACGAGATGG...CCTTTCCCCCAAATACACTGCGTCCTGGTTCCTGTTTAGCTGTTCTGAAATACG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR TCA 90 bp TCTAATTATCCAAAAGTGGGTTTTCATCAGGACGTACAGTCAGAGTGTGAGTGCCTCACCCATCCTCTGTaGGAGGGCGGGGCCTGCTGT +
Preference number: 4 (lower is better)
Translates to: SNYPKVGFHQDVQSECECLTHPL*EGGACC
Trigger: ACAGCAGGCCCCGCCCTCTCACAGAGGATGGGTGAG...GCACTCACACTCTGACTGTACGTCCTGATGAAAACCCACTTTTGGATAATTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR TCA 90 bp AGACAGTTGCAACCCATGGTGGATCCAAAGGTACAGTATCAAAATCATGGAACTCTCACCCATCCTCTGTaGGAGGGCGGGGCCTGCTGT +
Preference number: 4 (lower is better)
Translates to: RQLQPMVDPKVQYQNHGTLTHPL*EGGACC
Trigger: ACAGCAGGCCCCGCCCTCTCACAGAGGATGGGTGAG...AGTTCCATGATTTTGATACTGTACCTTTGGATCCACCATGGGTTGCAACTGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR TCA 90 bp CCTGGTACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCCGTACAGTCAGAGTGTaGGTGCATTCTAATGAAAAC +
Preference number: 4 (lower is better)
Translates to: PGTWEKQTPQQCPSGQWGRTVRV*VHSNEN
Trigger: GTTTTCATTAGAATGCACTCACACTCTGACTGTACG...GCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTACCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR TCA 90 bp TCATCACCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGTATCATCTATCTTTTTaGTTGCAGGGAATCCCTGCC +
Preference number: 4 (lower is better)
Translates to: SSPLTFPCTPPPCLQLGGYHLSF*LQGIPA
Trigger: GGCAGGGATTCCCTGCAATCAAAAAGATAGATGATA...CCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGGTGATGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR TCA 90 bp GAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTGGTCATTTACAAACCTTaGAGTGTTTTTGCCTGGATC +
Preference number: 4 (lower is better)
Translates to: EKQTPQQCPSGQWGRAGLVIYKP*SVFAWI
Trigger: GATCCAGGCAAAAACACTTCAAGGTTTGTAAATGAC...CAGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR TCA 90 bp GAAATGGCGCTCCCTGCGGCTGGTATTAGGTTACCATTGGCACCGAAGGAACCAAATTTTGGCCTGATGTaGTGCCACAAGACCCAACAG +
Preference number: 4 (lower is better)
Translates to: EMALPAAGIRLPLAPKEPNFGLM*CHKTQQ
Trigger: CTGTTGGGTCTTGTGGCATCACATCAGGCCAAAATT...TGGTTCCTTCGGTGCCAATGGTAACCTAATACCAGCCGCAGGGAGCGCCATTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR TCA 90 bp TCATCACCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCTTCTCTCTTTCCTTTaGGAATTCTCCGCTCAATAC +
Preference number: 4 (lower is better)
Translates to: SSPLTFPCTPPPCLQLGGLLSFL*EFSAQY
Trigger: GTATTGAGCGGAGAATTCTCAAAGGAAAGAGAGAAG...CCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGGTGATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350061.11
ENST00000422281.7
CDS-3UTR TCA 90 bp AGCCACAAACGCCTTCCGACTAACCAGCTTGGTGCCGTAGCTCAGGCAGAAAATAGGTCACGCAGCAAGTaGATGCTGAAACTGGGACTA +
Preference number: 4 (lower is better)
Translates to: SHKRLPTNQLGAVAQAENRSRSK*MLKLGL
Trigger: TAGTCCCAGTTTCAGCATTCACTTGCTGCGTGACCT...ATTTTCTGCCTGAGCTACGGCACCAAGCTGGTTAGTCGGAAGGCGTTTGTGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000645528.2
CDS-3UTR GCA 90 bp GTGTATCTGAGCTTCCTGGCCTGTCCACTTCTCACTGTATTCTGGACTGGGTCTTCCTACAGGTGGGGGTaGAGAGGTGCTCATAGTTTG +
Preference number: 4 (lower is better)
Translates to: VYLSFLACPLLTVFWTGSSYRWG*RGAHSL
Trigger: CAAACTATGAGCACCTCTGCACCCCCACCTGTAGGA...AGACCCAGTCCAGAATACAGTGAGAAGTGGACAGGCCAGGAAGCTCAGATACAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR GCA 90 bp CCAAGGGGCAGAGCAGCCAGCTGGACCTGCTCTGTAATTCACTTACTTACTTACAGGATGCCACTAAGTTaGTCAGGGAAGTCCAGTGCC +
Preference number: 4 (lower is better)
Translates to: PRGRAASWTCSVIHLLTYRMPLS*SGKSSA
Trigger: GGCACTGGACTTCCCTGAGCAACTTAGTGGCATCCT...GTAAGTAAGTAAGTGAATTACAGAGCAGGTCCAGCTGGCTGCTCTGCCCCTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR GCA 90 bp TTTCAAGGCCTTAGCCACAAACGCCTTCCGACTAACCAGCTTGGTGCCGTAGCTTTGCCGCCAAACAGCTaGATCCCAAGCAAGGAAAAG +
Preference number: 4 (lower is better)
Translates to: FQGLSHKRLPTNQLGAVALPPNS*IPSKEK
Trigger: CTTTTCCTTGCTTGGGATGCAGCTGTTTGGCGGCAA...AGCTACGGCACCAAGCTGGTTAGTCGGAAGGCGTTTGTGGCTAAGGCCTTGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR GCA 90 bp ATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGGTGCTCCGCTTGGTTTaGGTTTCATCAAAATTAAAC +
Preference number: 4 (lower is better)
Translates to: MGEADSTAVPIWTMGQGRVLRLV*VSSKLN
Trigger: GTTTAATTTTGATGAAACGCAAACCAAGCGGAGCAC...CCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR GCA 90 bp AGCGCCGAGGGGCCTGTCAGTCTTTGGGAGTTCGGGCAAACTAGGGATGCAGGAGAACACTGTGAGAAGTaGTTGAGGGAAATTGTCAAA +
Preference number: 4 (lower is better)
Translates to: SAEGPVSLWEFGQTRDAGEHCEK*LREIVK
Trigger: TTTGACAATTTCCCTCAAGCACTTCTCACAGTGTTC...TCCTGCATCCCTAGTTTGCCCGAACTCCCAAAGACTGACAGGCCCCTCGGCGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR GCA 90 bp AGCCACAAACGCCTTCCGACTAACCAGCTTGGTGCCGTAGCTCAGGCAGAAAATTCTCCGCAAGGGACGTaGTTTCAAGGCGTATTCAAC +
Preference number: 4 (lower is better)
Translates to: SHKRLPTNQLGAVAQAENSPQGT*FQGVFN
Trigger: GTTGAATACGCCTTGAAAGCACGTCCCTTGCGGAGA...ATTTTCTGCCTGAGCTACGGCACCAAGCTGGTTAGTCGGAAGGCGTTTGTGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000636938.1
ENST00000638120.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR GCA 90 bp GGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTCCCCTTAGGCTTAAATaGGATGACTTTCAAAACCAT +
Preference number: 4 (lower is better)
Translates to: GEADSTAVPIWTMGQGRSPLRLK*DDFQNH
Trigger: ATGGTTTTGAAAGTCATCGCATTTAAGCCTAAGGGG...AGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR GCA 90 bp GGCCTTAGCCACAAACGCCTTCCGACTAACCAGCTTGGTGCCGTAGCTCAGGCAAGACAATGGCAAAGTTaGTCCCACATGTATACTCCT +
Preference number: 4 (lower is better)
Translates to: GLSHKRLPTNQLGAVAQARQWQS*SHMYTP
Trigger: AGGAGTATACATGTGGGAGCAACTTTGCCATTGTCT...TGCCTGAGCTACGGCACCAAGCTGGTTAGTCGGAAGGCGTTTGTGGCTAAGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636938.1
ENST00000638120.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR GCA 90 bp ATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCAGACTCCATCAGGCTCGTCATCTTaGAAATCACACGATATAGCA +
Preference number: 4 (lower is better)
Translates to: MPSVGWAWCPGTWEKQTPSGSSS*KSHDIA
Trigger: TGCTATATCGTGTGATTTGCAAGATGACGAGCCTGA...TGGAGTCTGCTTCTCCCATGTACCAGGGCACCAGGCCCACCCAACTGAAGGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR GCA 90 bp CGTATTTCAGAACAGCTAAACAGGAACCAGGACGCAGTGTATTTGGGGGAAAGGGCTCAAGGTTCCCAATaGTGGGCCGCTTTCCATGGG +
Preference number: 4 (lower is better)
Translates to: RISEQLNRNQDAVYLGERAQGSQ*WAAFHG
Trigger: CCCATGGAAAGCGGCCCAGCATTGGGAACCTTGAGC...CCTTTCCCCCAAATACACTGCGTCCTGGTTCCTGTTTAGCTGTTCTGAAATACG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR GCA 90 bp TTCTTAAGCAGCACCACCAGTCCCCAGAGGACAAGAGCAGCTATATCTCATCCACTACTGAAATACTCCTaGTCCCCCAAGCAGTGGGGG +
Preference number: 4 (lower is better)
Translates to: FLSSTTSPQRTRAAISHPLLKYS*SPKQWG
Trigger: CCCCCACTGCTTGGGGGAGCAGGAGTATTTCAGTAG...TGGATGAGATATAGCTGCTCTTGTCCTCTGGGGACTGGTGGTGCTGCTTAAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR GCA 90 bp TACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCTTCTGCCTGGGTATCTaGTGTAGTAGCCATAGTTTT +
Preference number: 4 (lower is better)
Translates to: YMGEADSTAVPIWTMGQGFCLGI*CSSHSF
Trigger: AAAACTATGGCTACTACAGCAGATACCCAGGCAGAA...GCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR GCA 90 bp ACTGGCGTCACATCACAGAAAACCTTATTTATGAGGTCCCATTGCCCTCGCAATTCTTCCTGGCTGCTCTaGCGGCGCAGGCACTCAAAG +
Preference number: 4 (lower is better)
Translates to: TGVTSQKTLFMRSHCPRNSSWLL*RRRHSK
Trigger: CTTTGAGTGCCTGCGCCGGCAGAGCAGCCAGGAAGA...ATTGCGAGGGCAATGGGACCTCATAAATAAGGTTTTCTGTGATGTGACGCCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR GCA 90 bp TATTTCAGAACAGCTAAACAGGAACCAGGACGCAGTGTATTTGGGGGAAAGGGTTCCAGGGCCTCTGACTaGTCCACTTGGATCAGGGGG +
Preference number: 4 (lower is better)
Translates to: YFRTAKQEPGRSVFGGKGSRASD*STWIRG
Trigger: CCCCCTGATCCAAGTGGAGCAGTCAGAGGCCCTGGA...ACCCTTTCCCCCAAATACACTGCGTCCTGGTTCCTGTTTAGCTGTTCTGAAATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR GCA 90 bp GTCACATCACAGAAAACCTTATTTATGAGGTCCCATTGCCCTCGCAATAATCACCTGTGTACCAGGAGCTaGGGTGCAGGGACGGCAGGC +
Preference number: 4 (lower is better)
Translates to: VTSQKTLFMRSHCPRNNHLCTRS*GAGTAG
Trigger: GCCTGCCGTCCCTGCACCGCAGCTCCTGGTACACAG...GTGATTATTGCGAGGGCAATGGGACCTCATAAATAAGGTTTTCTGTGATGTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR GCA 90 bp ACTGGCGTCACATCACAGAAAACCTTATTTATGAGGTCCCATTGCCCTCGCAATGAGCGCATGGTACTCTaGCAGGCTCAACCGCTTGGG +
Preference number: 4 (lower is better)
Translates to: TGVTSQKTLFMRSHCPRNERMVL*QAQPLG
Trigger: CCCAAGCGGTTGAGCCTGGCAGAGTACCATGCGCTC...ATTGCGAGGGCAATGGGACCTCATAAATAAGGTTTTCTGTGATGTGACGCCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR GCA 90 bp TGCAACCCATGGTGGATCCAAAGGTACAGTATCAAAATCATGGAACTCTTGCCCGTTGGGTGGGCCTGGTaGCCTGGTACATGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: CNPWWIQRYSIKIMELLPVGWAW*PGTWEK
Trigger: CTTCTCCCATGTACCAGGGCACCAGGCCCACCCAAC...GGGCAAGAGTTCCATGATTTTGATACTGTACCTTTGGATCCACCATGGGTTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR GCA 90 bp AAACCGACCATCGGAGTGATATTCTCTTATGTAAACTGGCGTCACATCACAGAATGCACCCCGCCGCCATaGCTTCAGTTGGGTGGGCCT +
Preference number: 4 (lower is better)
Translates to: KPTIGVIFSYVNWRHITECTPPP*LQLGGP
Trigger: AGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCA...TTCTGTGATGTGACGCCAGTTTACATAAGAGAATATCACTCCGATGGTCGGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR GCA 90 bp GGTGATGCATATCATTTCATCCGCCAGGTCCTCCTCATCCCTCCCAGGGTCTGGTTTATGAGGTCCCATTaGCCTCGCAATAATCACTGG +
Preference number: 4 (lower is better)
Translates to: GDAYHFIRQVLLIPPRVWFMRSH*PRNNHW
Trigger: CCAGTGATTATTGCGAGGGCAATGGGACCTCATAAA...CCAGACCCTGGGAGGGATGAGGAGGACCTGGCGGATGAAATGATATGCATCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636448.1
CDS-3UTR GCA 90 bp CCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCAGAACCCATGGATATTGCTaGAGTTCAAATACAATACAG +
Preference number: 4 (lower is better)
Translates to: PPCLQLGGPGALVHGRSRTHGYC*SSNTIQ
Trigger: CTGTATTGTATTTGAACTGCAGCAATATCCATGGGT...TCTGCTTCTCCCATGTACCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR GCA 90 bp GGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCAGACTCCACAGCAGTGCCCATAAATCATGGAACTCTTaGCCAAAGAAAAGACTGCAA +
Preference number: 4 (lower is better)
Translates to: GGPGALVHGRSRLHSSAHKSWNS*PKKRLQ
Trigger: TTGCAGTCTTTTCTTTGGGCAAGAGTTCCATGATTT...ATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTACCAGGGCACCAGGCCCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR GCA 90 bp TCCTGTGGACACGTTAAGATGGAACCTGAGGTGTTGCCTGGATTGGTTTTGGCACACCTTCCGGAGGAGTaGTTTGCTTGGAAGGGGTCT +
Preference number: 4 (lower is better)
Translates to: SCGHVKMEPEVLPGLVLAHLPEE*FAWKGS
Trigger: AGACCCCTTCCAAGCAAAGCACTCCTCCGGAAGGTG...TGCCAAAACCAATCCAGGCAACACCTCAGGTTCCATCTTAACGTGTCCACAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CCA 90 bp GACTTACTTACACACCGTATTTCAGAACAGCTAAACAGGAACCAGGACGCAGTGTTTGCCTCGTTCGCGTaGTCCGCTTGCTGCTGCCGT +
Preference number: 4 (lower is better)
Translates to: DLLTHRISEQLNRNQDAVFASFA*SACCCR
Trigger: ACGGCAGCAGCAAGCGGACCACGCGAACGAGGCAAA...CACTGCGTCCTGGTTCCTGTTTAGCTGTTCTGAAATACGGTGTGTAAGTAAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CCA 90 bp GTGTCTTGGGCTCAGCATCAGATGTACAGACTCCAACCACCACTTGGAATCAGCGAACGCACATGGAGCTaGGTCCTCTTCAGCTACGAT +
Preference number: 4 (lower is better)
Translates to: VSWAQHQMYRLQPPLGISERTWS*VLFSYD
Trigger: ATCGTAGCTGAAGAGGACCCAGCTCCATGTGCGTTC...GCTGATTCCAAGTGGTGGTTGGAGTCTGTACATCTGATGCTGAGCCCAAGACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636938.1
CDS-3UTR CCA 90 bp GGTTCCCTGACTCCCAGTGTCCTTGAAACTAGACCACACTGCTTCCAAAGAGGCTACATTCCGTGCCATTaGCAGTACACTGGCGTCCAT +
Preference number: 4 (lower is better)
Translates to: GSLTPSVLETRPHCFQRGYIPCH*QYTGVH
Trigger: ATGGACGCCAGTGTACTGCCAATGGCACGGAATGTA...GCCTCTTTGGAAGCAGTGTGGTCTAGTTTCAAGGACACTGGGAGTCAGGGAACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636938.1
CDS-3UTR CCA 90 bp GAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTGCCAAGAGGACTTTGTTaGCAATATCTTGAATCTGTG +
Preference number: 4 (lower is better)
Translates to: EKQTPQQCPSGQWGRAGLPRGLC*QYLESV
Trigger: CACAGATTCAAGATATTGCCAACAAAGTCCTCTTGG...CAGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CCA 90 bp AGCGCCGAGGGGCCTGTCAGTCTTTGGGAGTTCGGGCAAACTAGGGATGCAGGACCAAGAGGACTTTGTTaGCAATATCTTGAATCTGTG +
Preference number: 4 (lower is better)
Translates to: SAEGPVSLWEFGQTRDAGPRGLC*QYLESV
Trigger: CACAGATTCAAGATATTGCCAACAAAGTCCTCTTGG...TCCTGCATCCCTAGTTTGCCCGAACTCCCAAAGACTGACAGGCCCCTCGGCGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR CCA 90 bp CCTGGTACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCGCAACAGCGAAGCGATaGACTTCATGGAGTTTAATA +
Preference number: 4 (lower is better)
Translates to: PGTWEKQTPQQCPSGQWGATAKR*TSWSLI
Trigger: TATTAAACTCCATGAAGTCCATCGCTTCGCTGTTGC...GCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTACCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CCA 90 bp GGAGGTCATGGCGGACTGGCATACAAAAGGAACTCTGTCAGCTCAGCGCCGAGGGCAACAGCGAAGCGATaGACTTCATGGAGTTTAATA +
Preference number: 4 (lower is better)
Translates to: GGHGGLAYKRNSVSSAPRATAKR*TSWSLI
Trigger: TATTAAACTCCATGAAGTCCATCGCTTCGCTGTTGC...CCTCGGCGCTGAGCTGACAGAGTTCCTTTTGTATGCCAGTCCGCCATGACCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR CCA 90 bp TACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCCTAGGCTCTCTTTTCTaGCAATCTTTTTCCTCTCCT +
Preference number: 4 (lower is better)
Translates to: YMGEADSTAVPIWTMGQGLGSLF*QSFSSP
Trigger: AGGAGAGGAAAAAGATTGCCAGAAAAGAGAGCCTAG...GCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CCA 90 bp CCTGGTACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCTCACTGTTGGCTATCTaGTTGACTTCTGGTTTGTTG +
Preference number: 4 (lower is better)
Translates to: PGTWEKQTPQQCPSGQWGSLLAI*LTSGLL
Trigger: CAACAAACCAGAAGTCAACCAGATAGCCAACAGTGA...GCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTACCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CCA 90 bp TTTCAAGGCCTTAGCCACAAACGCCTTCCGACTAACCAGCTTGGTGCCGTAGCTTTCCCCTTGAACAACTaGACCCCGATACAGGCAAAC +
Preference number: 4 (lower is better)
Translates to: FQGLSHKRLPTNQLGAVAFPLNN*TPIQAN
Trigger: GTTTGCCTGTATCGGGGTCCAGTTGTTCAAGGGGAA...AGCTACGGCACCAAGCTGGTTAGTCGGAAGGCGTTTGTGGCTAAGGCCTTGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CCA 90 bp TTTCAAGGCCTTAGCCACAAACGCCTTCCGACTAACCAGCTTGGTGCCGTAGCTACTGGTAGGGGTTTTTaGGGATGTATCTCCGCAAGG +
Preference number: 4 (lower is better)
Translates to: FQGLSHKRLPTNQLGAVATGRGF*GCISAR
Trigger: CCTTGCGGAGATACATCCCCAAAAACCCCTACCAGT...AGCTACGGCACCAAGCTGGTTAGTCGGAAGGCGTTTGTGGCTAAGGCCTTGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000636938.1
ENST00000638120.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CCA 90 bp GAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTGGGTTGTTATCTCTCATaGCAACTTTCCCAAACATCT +
Preference number: 4 (lower is better)
Translates to: EKQTPQQCPSGQWGRAGLGCYLS*QLSQTS
Trigger: AGATGTTTGGGAAAGTTGCCATGAGAGATAACAACC...CAGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CCA 90 bp ACTGGCGTCACATCACAGAAAACCTTATTTATGAGGTCCCATTGCCCTCGCAATAACCCCAGGGGAGGCTaGATGCGTCGAAGCAGAGTG +
Preference number: 4 (lower is better)
Translates to: TGVTSQKTLFMRSHCPRNNPRGG*MRRSRV
Trigger: CACTCTGCTTCGACGCATCCAGCCTCCCCTGGGGTT...ATTGCGAGGGCAATGGGACCTCATAAATAAGGTTTTCTGTGATGTGACGCCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CCA 90 bp GACTTACTTACACACCGTATTTCAGAACAGCTAAACAGGAACCAGGACGCAGTGAACCCCAGGGGAGGCTaGATGCGTCGAAGCAGAGTG +
Preference number: 4 (lower is better)
Translates to: DLLTHRISEQLNRNQDAVNPRGG*MRRSRV
Trigger: CACTCTGCTTCGACGCATCCAGCCTCCCCTGGGGTT...CACTGCGTCCTGGTTCCTGTTTAGCTGTTCTGAAATACGGTGTGTAAGTAAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CCA 90 bp GACTTACTTACACACCGTATTTCAGAACAGCTAAACAGGAACCAGGACGCAGTGATCCCTCCCAGGGTCTaGCTCTTCGTCGCTGTAGCC +
Preference number: 4 (lower is better)
Translates to: DLLTHRISEQLNRNQDAVIPPRV*LFVAVA
Trigger: GGCTACAGCGACGAAGAGCCAGACCCTGGGAGGGAT...CACTGCGTCCTGGTTCCTGTTTAGCTGTTCTGAAATACGGTGTGTAAGTAAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CCA 90 bp ACTGACTTTGGAAAAGATCATCGCCTCTATCAGACACTTAGGGTCCTGGTCTGGCCAGGCTCAACCGCTTaGGACCTGTTCCTACCAGGT +
Preference number: 4 (lower is better)
Translates to: TDFGKDHRLYQTLRVLVWPGSTA*DLFLPG
Trigger: ACCTGGTAGGAACAGGTCCCAAGCGGTTGAGCCTGG...CCAGACCAGGACCCTAAGTGTCTGATAGAGGCGATGATCTTTTCCAAAGTCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR CCA 90 bp GACTTACTTACACACCGTATTTCAGAACAGCTAAACAGGAACCAGGACGCAGTGTCAGTTGGGTGGGCCTaGTGCCCTGGTACATGGGAG +
Preference number: 4 (lower is better)
Translates to: DLLTHRISEQLNRNQDAVSVGWA*CPGTWE
Trigger: CTCCCATGTACCAGGGCACCAGGCCCACCCAACTGA...CACTGCGTCCTGGTTCCTGTTTAGCTGTTCTGAAATACGGTGTGTAAGTAAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CCA 90 bp CGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCACTGCAAATAGTCATCTaGTATATCTTGTGGAAAGAT +
Preference number: 4 (lower is better)
Translates to: RRHAFSWVGLVPWYMGEALQIVI*YILWKD
Trigger: ATCTTTCCACAAGATATACCAGATGACTATTTGCAG...TGCTTCTCCCATGTACCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR CCA 90 bp ACCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGCTAATTATCCAAAAGTaGGTTTTCATCAGGACGTAC +
Preference number: 4 (lower is better)
Translates to: TFNFPLHPAAMPSVGWAWLIIQK*VFIRTY
Trigger: GTACGTCCTGATGAAAACCCACTTTTGGATAATTAG...CCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR CCA 90 bp ACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGTTTGGATTTTGAGATaGCTTGACAGAGACTTCCAC +
Preference number: 4 (lower is better)
Translates to: TWEKQTPQQCPSGQWGRAVWILR*LDRDFH
Trigger: GTGGAAGTCTCTGTCAAGCCATCTCAAAATCCAAAC...TGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350061.11
ENST00000422281.7
CDS-3UTR TCA 90 bp ATCATGGAACTCTTGCCCAAAGAAAAGACTGCAAATAGTCATCTGGTATATCTTCACTGTGCTGGGCGTTaGGGCGGGGGCGGAATGGGG +
Preference number: 4 (lower is better)
Translates to: IMELLPKEKTANSHLVYLHCAGR*GGGGMG
Trigger: CCCCATTCCGCCCCCGCCTCAACGCCCAGCACAGTG...AAGATATACCAGATGACTATTTGCAGTCTTTTCTTTGGGCAAGAGTTCCATGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR TCA 90 bp GTGTTTCCTGTGGACACGTTAAGATGGAACCTGAGGTGTTGCCTGGATTGGTTTTCCAGATTTGCCGCTTaGGTGGTTCCCGCCTTCTGT +
Preference number: 4 (lower is better)
Translates to: VFPVDTLRWNLRCCLDWFSRFAA*VVPAFC
Trigger: ACAGAAGGCGGGAACCACTCAAGCGGCAAATCTGGA...AAACCAATCCAGGCAACACCTCAGGTTCCATCTTAACGTGTCCACAGGAAACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR TCA 90 bp TCCTGTGGACACGTTAAGATGGAACCTGAGGTGTTGCCTGGATTGGTTTTGGCAAGGCACGGAGGGCTTTaGCATCAAAGCCTCCAGATT +
Preference number: 4 (lower is better)
Translates to: SCGHVKMEPEVLPGLVLARHGGL*HQSLQI
Trigger: AATCTGGAGGCTTTGATGTCAAAGCCCTCCGTGCCT...TGCCAAAACCAATCCAGGCAACACCTCAGGTTCCATCTTAACGTGTCCACAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR TCA 90 bp GTGTTTCCTGTGGACACGTTAAGATGGAACCTGAGGTGTTGCCTGGATTGGTTTTCTCGCCTTCACCGCTaGCGTTCTCTGTGTTCACAG +
Preference number: 4 (lower is better)
Translates to: VFPVDTLRWNLRCCLDWFSRLHR*RSLCSQ
Trigger: CTGTGAACACAGAGAACGTCAGCGGTGAAGGCGAGA...AAACCAATCCAGGCAACACCTCAGGTTCCATCTTAACGTGTCCACAGGAAACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR TCA 90 bp ACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAAGCAATCAAACCGGTTaGAAAGAGAGACGAAATATG +
Preference number: 4 (lower is better)
Translates to: TWEKQTPQQCPSGQWGRASNQTG*KERRNM
Trigger: CATATTTCGTCTCTCTTTTCAACCGGTTTGATTGCT...TGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR TCA 90 bp AGGTTTGGGTGTGGTGGTGTTTCCTGTGGACACGTTAAGATGGAACCTGAGGTGGATAGAACTTCCCCTTaGACAACTGGACCCCGATAC +
Preference number: 4 (lower is better)
Translates to: RFGCGGVSCGHVKMEPEVDRTSP*TTGPRY
Trigger: GTATCGGGGTCCAGTTGTTCAAGGGGAAGTTCTATC...CACCTCAGGTTCCATCTTAACGTGTCCACAGGAAACACCACCACACCCAAACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000645528.2
CDS-3UTR TCA 90 bp GAAATGGCGCTCCCTGCGGCTGGTATTAGGTTACCATTGGCACCGAAGGAACCAGGACGTTGTCGAAGTTaGAATCACTGTTTTGCCAGA +
Preference number: 4 (lower is better)
Translates to: EMALPAAGIRLPLAPKEPGRCRS*NHCFAR
Trigger: TCTGGCAAAACAGTGATTTCAACTTCGACAACGTCC...TGGTTCCTTCGGTGCCAATGGTAACCTAATACCAGCCGCAGGGAGCGCCATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR TCA 90 bp GACTTACTTACACACCGTATTTCAGAACAGCTAAACAGGAACCAGGACGCAGTGACACTGGACCTTCTCTaGGGCTCCCGGTCATGCTTG +
Preference number: 4 (lower is better)
Translates to: DLLTHRISEQLNRNQDAVTLDLL*GSRSCL
Trigger: CAAGCATGACCGGGAGCCTCAGAGAAGGTCCAGTGT...CACTGCGTCCTGGTTCCTGTTTAGCTGTTCTGAAATACGGTGTGTAAGTAAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR TCA 90 bp CCAAGGGGCAGAGCAGCCAGCTGGACCTGCTCTGTAATTCACTTACTTACTTACAGCATTCCTCACTACTaGAATACTCCTGCTCCCCCA +
Preference number: 4 (lower is better)
Translates to: PRGRAASWTCSVIHLLTYSIPHY*NTPAPP
Trigger: TGGGGGAGCAGGAGTATTTCAGTAGTGAGGAATGCT...GTAAGTAAGTAAGTGAATTACAGAGCAGGTCCAGCTGGCTGCTCTGCCCCTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR TCA 90 bp TTCTTAAGCAGCACCACCAGTCCCCAGAGGACAAGAGCAGCTATATCTCATCCAGGCCGGCAACTGCCATaGTCTGTTGCTGCATTAGAT +
Preference number: 4 (lower is better)
Translates to: FLSSTTSPQRTRAAISHPGRQLP*SVAALD
Trigger: ATCTAATGCAGCAACAGATCATGGCAGTTGCCGGCC...TGGATGAGATATAGCTGCTCTTGTCCTCTGGGGACTGGTGGTGCTGCTTAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR TCA 90 bp TTCTTAAGCAGCACCACCAGTCCCCAGAGGACAAGAGCAGCTATATCTCATCCAGGTCGAGTGACTCGGTaGGTACTTCTGGGCTTTACT +
Preference number: 4 (lower is better)
Translates to: FLSSTTSPQRTRAAISHPGRVTR*VLLGFT
Trigger: AGTAAAGCCCAGAAGTACTCACCGAGTCACTCGACC...TGGATGAGATATAGCTGCTCTTGTCCTCTGGGGACTGGTGGTGCTGCTTAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR TCA 90 bp TATTTCAGAACAGCTAAACAGGAACCAGGACGCAGTGTATTTGGGGGAAAGGGTCCATCTCGTCGATGGTaGGGTCACAGGCATCAGCGA +
Preference number: 4 (lower is better)
Translates to: YFRTAKQEPGRSVFGGKGPSRRW*GHRHQR
Trigger: TCGCTGATGCCTGTGACCTCACCATCGACGAGATGG...ACCCTTTCCCCCAAATACACTGCGTCCTGGTTCCTGTTTAGCTGTTCTGAAATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR TCA 90 bp ACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTTTATGGCTTTCTTaGGGCATGACATCTCTTATA +
Preference number: 4 (lower is better)
Translates to: TWEKQTPQQCPSGQWGRAGLWLS*GMTSLI
Trigger: TATAAGAGATGTCATGCCTCAAGAAAGCCATAAACC...TGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR TCA 90 bp CCTGGTACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCTCTGTTGACAGAAAATaGAGCCTTGACGGTTCTAAT +
Preference number: 4 (lower is better)
Translates to: PGTWEKQTPQQCPSGQWGSVDRK*SLDGSN
Trigger: ATTAGAACCGTCAAGGCTTCATTTTCTGTCAACAGA...GCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTACCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR TCA 90 bp TCATCACCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGGTCATTTACAAACCTTaGAGTGTTTTTGCCTGGATC +
Preference number: 4 (lower is better)
Translates to: SSPLTFPCTPPPCLQLGGVIYKP*SVFAWI
Trigger: GATCCAGGCAAAAACACTTCAAGGTTTGTAAATGAC...CCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGGTGATGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR TCA 90 bp TCATCACCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCAGTTTGTAAGTACTaGCTTTGGAAAAGATCATCG +
Preference number: 4 (lower is better)
Translates to: SSPLTFPCTPPPCLQLGGPVCKY*LWKRSS
Trigger: CGATGATCTTTTCCAAAGTCAGTACTTACAAACTGG...CCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGGTGATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR TCA 90 bp ACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCACCAGTTTGTAAGTACTaGCTTTGGAAAAGATCATCG +
Preference number: 4 (lower is better)
Translates to: TWEKQTPQQCPSGQWGRAPVCKY*LWKRSS
Trigger: CGATGATCTTTTCCAAAGTCAGTACTTACAAACTGG...TGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR TCA 90 bp AGCCACAAACGCCTTCCGACTAACCAGCTTGGTGCCGTAGCTCAGGCAGAAAATCAGGGTTACCTCTGTTaGCATCTTTGTGCATTGCCT +
Preference number: 4 (lower is better)
Translates to: SHKRLPTNQLGAVAQAENQGYLC*HLCALP
Trigger: AGGCAATGCACAAAGATGTCAACAGAGGTAACCCTG...ATTTTCTGCCTGAGCTACGGCACCAAGCTGGTTAGTCGGAAGGCGTTTGTGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636938.1
CDS-3UTR GCA 90 bp CAGGACTTTGGAATGGAGTCAGATACCCACCTTAGGCAGGTCTGCTTAATCTTTCCAGGCCTCACCTGTTaGACACCTGAAGAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: QDFGMESDTHLRQVCLIFPGLTC*TPEEQQ
Trigger: CTGCTGCTCTTCAGGTGTGCAACAGGTGAGGCCTGG...AAAGATTAAGCAGACCTGCCTAAGGTGGGTATCTGACTCCATTCCAAAGTCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR GCA 90 bp TTCTTAAGCAGCACCACCAGTCCCCAGAGGACAAGAGCAGCTATATCTCATCCATCTGGCCCAATGTCATaGAGTGTCCTTAATCCCGCC +
Preference number: 4 (lower is better)
Translates to: FLSSTTSPQRTRAAISHPSGPMS*SVLNPA
Trigger: GGCGGGATTAAGGACACTGCATGACATTGGGCCAGA...TGGATGAGATATAGCTGCTCTTGTCCTCTGGGGACTGGTGGTGCTGCTTAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR GCA 90 bp TTGGACCAAAATTGCTACCTATCATCTATCTTTTTGATTGCAGGGAATCCCTGCGGACCTCTTCCTGGCTaGTCTGCCGGCGCAGGCACT +
Preference number: 4 (lower is better)
Translates to: LDQNCYLSSIFLIAGNPCGPLPG*SAGAGT
Trigger: AGTGCCTGCGCCGGCAGAGCAGCCAGGAAGAGGTCC...GCAGGGATTCCCTGCAATCAAAAAGATAGATGATAGGTAGCAATTTTGGTCCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR GCA 90 bp ACTGGCGTCACATCACAGAAAACCTTATTTATGAGGTCCCATTGCCCTCGCAATCCTTTAACTTTCCCCTaGACCCCGCCGCCATGCCTT +
Preference number: 4 (lower is better)
Translates to: TGVTSQKTLFMRSHCPRNPLTFP*TPPPCL
Trigger: AAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGG...ATTGCGAGGGCAATGGGACCTCATAAATAAGGTTTTCTGTGATGTGACGCCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR GCA 90 bp GCTGTTTCAGTAGAAATAAGCCCACTTGAGACTTTTCCCTTTCAAGGCCTTAGCTCTCTGTGGGGCAGCTaGCCCCCTCCTTTGCTCTCT +
Preference number: 4 (lower is better)
Translates to: AVSVEISPLETFPFQGLSSLWGS*PPPLLS
Trigger: AGAGAGCAAAGGAGGGGGGCAGCTGCCCCACAGAGA...GCTAAGGCCTTGAAAGGGAAAAGTCTCAAGTGGGCTTATTTCTACTGAAACAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR GCA 90 bp AGGTTTGGGTGTGGTGGTGTTTCCTGTGGACACGTTAAGATGGAACCTGAGGTGGAAACTAGACCACACTaGTTCCAAAGAGGCATCCCC +
Preference number: 4 (lower is better)
Translates to: RFGCGGVSCGHVKMEPEVETRPH*FQRGIP
Trigger: GGGGATGCCTCTTTGGAAGCAGTGTGGTCTAGTTTC...CACCTCAGGTTCCATCTTAACGTGTCCACAGGAAACACCACCACACCCAAACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000645528.2
CDS-3UTR CCA 90 bp TTTCAAGGCCTTAGCCACAAACGCCTTCCGACTAACCAGCTTGGTGCCGTAGCTGGACAACTTGTAAACTaGGCACTCCTGACACTAGTC +
Preference number: 4 (lower is better)
Translates to: FQGLSHKRLPTNQLGAVAGQLVN*ALLTLV
Trigger: GACTAGTGTCAGGAGTGCCCAGTTTACAAGTTGTCC...AGCTACGGCACCAAGCTGGTTAGTCGGAAGGCGTTTGTGGCTAAGGCCTTGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR CCA 90 bp TACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAAGCGATGGACTTCATaGAGTTTAATAAGGATGCCA +
Preference number: 4 (lower is better)
Translates to: YMGEADSTAVPIWTMGQGKRWTS*SLIRMP
Trigger: TGGCATCCTTATTAAACTCCATGAAGTCCATCGCTT...GCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CCA 90 bp GGCCTTAGCCACAAACGCCTTCCGACTAACCAGCTTGGTGCCGTAGCTCAGGCAAAGCGATGGACTTCATaGAGTTTAATAAGGATGCCA +
Preference number: 4 (lower is better)
Translates to: GLSHKRLPTNQLGAVAQAKRWTS*SLIRMP
Trigger: TGGCATCCTTATTAAACTCCATGAAGTCCATCGCTT...TGCCTGAGCTACGGCACCAAGCTGGTTAGTCGGAAGGCGTTTGTGGCTAAGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR CCA 90 bp CACCCCCAAAATAATCACACCAAATGGCCAAAGGGCTTTCTTTATCAGTTGGCCTGGTTGATGAGCTTGTaGCAGCCTACGCGGATCGGG +
Preference number: 4 (lower is better)
Translates to: HPQNNHTKWPKGFLYQLAWLMSL*QPTRIG
Trigger: CCCGATCCGCGTAGGCTGCCACAAGCTCATCAACCA...GGCCAACTGATAAAGAAAGCCCTTTGGCCATTTGGTGTGATTATTTTGGGGGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636627.1
CDS-3UTR CCA 90 bp GTGTTTCCTGTGGACACGTTAAGATGGAACCTGAGGTGTTGCCTGGATTGGTTTGCCACGAAGACGCACTaGACCACGTGCTTAAGTCCT +
Preference number: 4 (lower is better)
Translates to: VFPVDTLRWNLRCCLDWFATKTH*TTCLSP
Trigger: AGGACTTAAGCACGTGGTCCAGTGCGTCTTCGTGGC...AAACCAATCCAGGCAACACCTCAGGTTCCATCTTAACGTGTCCACAGGAAACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CCA 90 bp GAGCTTCCTGGCCTGTCCACTTCTCACTGTATTCTGGACTGGGTCTCTGCAGAGCTTCAGGGTTACTTTTaGCTTCATCCGTACAGCGAT +
Preference number: 4 (lower is better)
Translates to: ELPGLSTSHCILDWVSAELQGYF*LHPYSD
Trigger: ATCGCTGTACGGATGAAGCCAAAAGTAACCCTGAAG...CTCTGCAGAGACCCAGTCCAGAATACAGTGAGAAGTGGACAGGCCAGGAAGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CCA 90 bp AGCCACAAACGCCTTCCGACTAACCAGCTTGGTGCCGTAGCTCAGGCAGAAAATCTCCATTCGAGTCGATaGCTTTATACAGCAACGCAG +
Preference number: 4 (lower is better)
Translates to: SHKRLPTNQLGAVAQAENLHSSR*LYTATQ
Trigger: CTGCGTTGCTGTATAAAGCCATCGACTCGAATGGAG...ATTTTCTGCCTGAGCTACGGCACCAAGCTGGTTAGTCGGAAGGCGTTTGTGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CCA 90 bp ATACCCAAGGGGCAGAGCAGCCAGCTGGACCTGCTCTGTAATTCACTTACTTACGCGGTGGTTGTAGATTaGGCCGATGTTCTCTCCATT +
Preference number: 4 (lower is better)
Translates to: IPKGQSSQLDLLCNSLTYAVVVD*ADVLSI
Trigger: AATGGAGAGAACATCGGCCCAATCTACAACCACCGC...GTAAGTAAGTGAATTACAGAGCAGGTCCAGCTGGCTGCTCTGCCCCTTGGGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR CCA 90 bp CCAAGGGGCAGAGCAGCCAGCTGGACCTGCTCTGTAATTCACTTACTTACTTACACTGGTAGGGGTTTTTaGGGATGTATCTCCGCAAGG +
Preference number: 4 (lower is better)
Translates to: PRGRAASWTCSVIHLLTYTGRGF*GCISAR
Trigger: CCTTGCGGAGATACATCCCCAAAAACCCCTACCAGT...GTAAGTAAGTAAGTGAATTACAGAGCAGGTCCAGCTGGCTGCTCTGCCCCTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR CCA 90 bp TACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCGGTTGTTATCTCTCATaGCAACTTTCCCAAACATCT +
Preference number: 4 (lower is better)
Translates to: YMGEADSTAVPIWTMGQGGCYLS*QLSQTS
Trigger: AGATGTTTGGGAAAGTTGCCATGAGAGATAACAACC...GCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CCA 90 bp GGCCTTAGCCACAAACGCCTTCCGACTAACCAGCTTGGTGCCGTAGCTCAGGCAGGTTGTTATCTCTCATaGCAACTTTCCCAAACATCT +
Preference number: 4 (lower is better)
Translates to: GLSHKRLPTNQLGAVAQAGCYLS*QLSQTS
Trigger: AGATGTTTGGGAAAGTTGCCATGAGAGATAACAACC...TGCCTGAGCTACGGCACCAAGCTGGTTAGTCGGAAGGCGTTTGTGGCTAAGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636938.1
ENST00000638120.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CCA 90 bp TCCCTTTCACGAAAAAGAACCACCGTGAGCAACGTCCGCGACAGGCAGCCCTGGGGTTGTTATCTCTCATaGCAACTTTCCCAAACATCT +
Preference number: 4 (lower is better)
Translates to: SLSRKRTTVSNVRDRQPWGCYLS*QLSQTS
Trigger: AGATGTTTGGGAAAGTTGCCATGAGAGATAACAACC...CCAGGGCTGCCTGTCGCGGACGTTGCTCACGGTGGTTCTTTTTCGTGAAAGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CCA 90 bp TGCAAACACTCTCTGGACTTTCTGGAGACACTAGCATTAAAACCAAAGCACTGGAACCCCAGGGGAGGCTaGATGCGTCGAAGCAGAGTG +
Preference number: 4 (lower is better)
Translates to: CKHSLDFLETLALKPKHWNPRGG*MRRSRV
Trigger: CACTCTGCTTCGACGCATCCAGCCTCCCCTGGGGTT...CCAGTGCTTTGGTTTTAATGCTAGTGTCTCCAGAAAGTCCAGAGAGTGTTTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000636627.1
CDS-3UTR CCA 90 bp GCTGTTTCAGTAGAAATAAGCCCACTTGAGACTTTTCCCTTTCAAGGCCTTAGCAACCCCAGGGGAGGCTaGATGCGTCGAAGCAGAGTG +
Preference number: 4 (lower is better)
Translates to: AVSVEISPLETFPFQGLSNPRGG*MRRSRV
Trigger: CACTCTGCTTCGACGCATCCAGCCTCCCCTGGGGTT...GCTAAGGCCTTGAAAGGGAAAAGTCTCAAGTGGGCTTATTTCTACTGAAACAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000636938.1
ENST00000638120.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CCA 90 bp CACCAGTCCCCAGAGGACAAGAGCAGCTATATCTCATCCACCTATGCATTTCTGGACGGTGGGTGGTATTaGTCTGCTGAAGGGAATCTC +
Preference number: 4 (lower is better)
Translates to: HQSPEDKSSYISSTYAFLDGGWY*SAEGNL
Trigger: GAGATTCCCTTCAGCAGACCAATACCACCCACCGTC...CAGAAATGCATAGGTGGATGAGATATAGCTGCTCTTGTCCTCTGGGGACTGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR CCA 90 bp CCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCAGAGAACTTGCTTTCCTATaGAATTATGGTTATGATGGT +
Preference number: 4 (lower is better)
Translates to: PPCLQLGGPGALVHGRSRELAFL*NYGYDG
Trigger: ACCATCATAACCATAATTCCATAGGAAAGCAAGTTC...TCTGCTTCTCCCATGTACCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CCA 90 bp ACTGGCGTCACATCACAGAAAACCTTATTTATGAGGTCCCATTGCCCTCGCAATCAAGGTTCCCAATGCTaGGCCGCTTTCCATGGGCAG +
Preference number: 4 (lower is better)
Translates to: TGVTSQKTLFMRSHCPRNQGSQC*AAFHGQ
Trigger: CTGCCCATGGAAAGCGGCCCAGCATTGGGAACCTTG...ATTGCGAGGGCAATGGGACCTCATAAATAAGGTTTTCTGTGATGTGACGCCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CCA 90 bp TATTTCAGAACAGCTAAACAGGAACCAGGACGCAGTGTATTTGGGGGAAAGGGTTTTGCCTGCTCCAGGTaGGCGAGCTGTCATCCTCGT +
Preference number: 4 (lower is better)
Translates to: YFRTAKQEPGRSVFGGKGFACSR*ASCHPR
Trigger: ACGAGGATGACAGCTCGCCCACCTGGAGCAGGCAAA...ACCCTTTCCCCCAAATACACTGCGTCCTGGTTCCTGTTTAGCTGTTCTGAAATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CCA 90 bp GACAGTTGCAACCCATGGTGGATCCAAAGGTACAGTATCAAAATCATGGAACTCTGTTCCGGAAGCTGCTaGGGACAGTCAGGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: DSCNPWWIQRYSIKIMELCSGSC*GQSGWL
Trigger: CAGCCAGCCTGACTGTCCCCAGCAGCTTCCGGAACA...GAGTTCCATGATTTTGATACTGTACCTTTGGATCCACCATGGGTTGCAACTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR CCA 90 bp AAACCGACCATCGGAGTGATATTCTCTTATGTAAACTGGCGTCACATCACAGAACTGGGGCCGAGCGCATaGTACTCTGCCAGGCTCAAC +
Preference number: 4 (lower is better)
Translates to: KPTIGVIFSYVNWRHITELGPSA*YSARLN
Trigger: GTTGAGCCTGGCAGAGTACCATGCGCTCGGCCCCAG...TTCTGTGATGTGACGCCAGTTTACATAAGAGAATATCACTCCGATGGTCGGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CCA 90 bp GACTTACTTACACACCGTATTTCAGAACAGCTAAACAGGAACCAGGACGCAGTGATGCCTTCAGTTGGGTaGGCCTGGTGCCCTGGTACA +
Preference number: 4 (lower is better)
Translates to: DLLTHRISEQLNRNQDAVMPSVG*AWCPGT
Trigger: TGTACCAGGGCACCAGGCCCACCCAACTGAAGGCAT...CACTGCGTCCTGGTTCCTGTTTAGCTGTTCTGAAATACGGTGTGTAAGTAAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CCA 90 bp ATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCAGACTCCAAGGACGCAGTGTATTTaGGGGAAAGGGTTTAAAAAT +
Preference number: 4 (lower is better)
Translates to: MPSVGWAWCPGTWEKQTPRTQCI*GKGFKN
Trigger: ATTTTTAAACCCTTTCCCCCAAATACACTGCGTCCT...TGGAGTCTGCTTCTCCCATGTACCAGGGCACCAGGCCCACCCAACTGAAGGCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CCA 90 bp TACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCATAATCACTGGTAGCTaGGTTCTGACTTACTTACAC +
Preference number: 4 (lower is better)
Translates to: YMGEADSTAVPIWTMGQGIITGS*VLTYLH
Trigger: GTGTAAGTAAGTCAGAACCCAGCTACCAGTGATTAT...GCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CCA 90 bp CCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGTATCTAAGTTTACCTaGTTGCGAGTGCATTATTAT +
Preference number: 4 (lower is better)
Translates to: PLTFPCTPPPCLQLGGPGVSKFT*LRVHYY
Trigger: ATAATAATGCACTCGCAACCAGGTAAACTTAGATAC...ACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CCA 90 bp GAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTGTTACTTACCAGAGGGTaGTTCAAGTCAAACAAACAA +
Preference number: 4 (lower is better)
Translates to: EKQTPQQCPSGQWGRAGLLLTRG*FKSNKQ
Trigger: TTGTTTGTTTGACTTGAACCACCCTCTGGTAAGTAA...CAGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR CCA 90 bp CGTATTTCAGAACAGCTAAACAGGAACCAGGACGCAGTGTATTTGGGGGAAAGGATTTCAGAGCTGCCCTaGCACAGTACCTGCCCTGTC +
Preference number: 4 (lower is better)
Translates to: RISEQLNRNQDAVYLGERISELP*HSTCPV
Trigger: GACAGGGCAGGTACTGTGCCAGGGCAGCTCTGAAAT...CCTTTCCCCCAAATACACTGCGTCCTGGTTCCTGTTTAGCTGTTCTGAAATACG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR CCA 90 bp TTTCAAGGCCTTAGCCACAAACGCCTTCCGACTAACCAGCTTGGTGCCGTAGCTTCTGTAGGGCAATTGTaGTGTTCTTCGCAGGGTACT +
Preference number: 4 (lower is better)
Translates to: FQGLSHKRLPTNQLGAVASVGQL*CSSQGT
Trigger: AGTACCCTGCGAAGAACACCACAATTGCCCTACAGA...AGCTACGGCACCAAGCTGGTTAGTCGGAAGGCGTTTGTGGCTAAGGCCTTGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636938.1
ENST00000638120.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CCA 90 bp TTTCAAGGCCTTAGCCACAAACGCCTTCCGACTAACCAGCTTGGTGCCGTAGCTCTTCTCACTGTATTCTaGACTGGGTCTCTGCAGAGA +
Preference number: 4 (lower is better)
Translates to: FQGLSHKRLPTNQLGAVALLTVF*TGSLQR
Trigger: TCTCTGCAGAGACCCAGTCCAGAATACAGTGAGAAG...AGCTACGGCACCAAGCTGGTTAGTCGGAAGGCGTTTGTGGCTAAGGCCTTGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CCA 90 bp AGCCACAAACGCCTTCCGACTAACCAGCTTGGTGCCGTAGCTCAGGCAGAAAATTGCCTGGATTGGTTTTaGCATGCGGGTGTATGTGTT +
Preference number: 4 (lower is better)
Translates to: SHKRLPTNQLGAVAQAENCLDWF*HAGVCV
Trigger: AACACATACACCCGCATGCCAAAACCAATCCAGGCA...ATTTTCTGCCTGAGCTACGGCACCAAGCTGGTTAGTCGGAAGGCGTTTGTGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CCA 90 bp AGGTTTGGGTGTGGTGGTGTTTCCTGTGGACACGTTAAGATGGAACCTGAGGTGGATGAGGTTTGGGTGTaGTGGTGTTTCCTGTGGACA +
Preference number: 4 (lower is better)
Translates to: RFGCGGVSCGHVKMEPEVDEVWV*WCFLWT
Trigger: TGTCCACAGGAAACACCACCACACCCAAACCTCATC...CACCTCAGGTTCCATCTTAACGTGTCCACAGGAAACACCACCACACCCAAACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000645528.2
CDS-3UTR TCA 90 bp AGGTTTGGGTGTGGTGGTGTTTCCTGTGGACACGTTAAGATGGAACCTGAGGTGCTCTTGGCGTATTGCTaGCGTTTTCTTTGGGAGAGA +
Preference number: 4 (lower is better)
Translates to: RFGCGGVSCGHVKMEPEVLLAYC*RFLWER
Trigger: TCTCTCCCAAAGAAAACGTCAGCAATACGCCAAGAG...CACCTCAGGTTCCATCTTAACGTGTCCACAGGAAACACCACCACACCCAAACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636938.1
CDS-3UTR TCA 90 bp TATTTCAGAACAGCTAAACAGGAACCAGGACGCAGTGTATTTGGGGGAAAGGGTTCCAGATTTGCCGCTTaGGTGGTTCCCGCCTTCTGT +
Preference number: 4 (lower is better)
Translates to: YFRTAKQEPGRSVFGGKGSRFAA*VVPAFC
Trigger: ACAGAAGGCGGGAACCACTCAAGCGGCAAATCTGGA...ACCCTTTCCCCCAAATACACTGCGTCCTGGTTCCTGTTTAGCTGTTCTGAAATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR TCA 90 bp GTGTTTCCTGTGGACACGTTAAGATGGAACCTGAGGTGTTGCCTGGATTGGTTTTGTCCTCAGCTTGGGTaGTCCAATCCAAGTAGCCCT +
Preference number: 4 (lower is better)
Translates to: VFPVDTLRWNLRCCLDWFCPQLG*SNPSSP
Trigger: AGGGCTACTTGGATTGGATCACCCAAGCTGAGGACA...AAACCAATCCAGGCAACACCTCAGGTTCCATCTTAACGTGTCCACAGGAAACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR TCA 90 bp ACTGACTTTGGAAAAGATCATCGCCTCTATCAGACACTTAGGGTCCTGGTCTGGTACATCTTCTGCGATTaGATCGGTTCCAGCGACGCC +
Preference number: 4 (lower is better)
Translates to: TDFGKDHRLYQTLRVLVWYIFCD*IGSSDA
Trigger: GGCGTCGCTGGAACCGATTCAATCGCAGAAGATGTA...CCAGACCAGGACCCTAAGTGTCTGATAGAGGCGATGATCTTTTCCAAAGTCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR TCA 90 bp AGACAGTTGCAACCCATGGTGGATCCAAAGGTACAGTATCAAAATCATGGAACTCCAGCCAGTAAAACGTaGCAGACTTCACGGCGGCCC +
Preference number: 4 (lower is better)
Translates to: RQLQPMVDPKVQYQNHGTPASKT*QTSRRP
Trigger: GGGCCGCCGTGAAGTCTGTCACGTTTTACTGGCTGG...AGTTCCATGATTTTGATACTGTACCTTTGGATCCACCATGGGTTGCAACTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR TCA 90 bp TACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCTTGTTGGCAATATCTTaGATCTGTGTCAACCAATCT +
Preference number: 4 (lower is better)
Translates to: YMGEADSTAVPIWTMGQGLLAIS*ICVNQS
Trigger: AGATTGGTTGACACAGATTCAAGATATTGCCAACAA...GCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR TCA 90 bp GGAGGTCATGGCGGACTGGCATACAAAAGGAACTCTGTCAGCTCAGCGCCGAGGTTGTTGGCAATATCTTaGATCTGTGTCAACCAATCT +
Preference number: 4 (lower is better)
Translates to: GGHGGLAYKRNSVSSAPRLLAIS*ICVNQS
Trigger: AGATTGGTTGACACAGATTCAAGATATTGCCAACAA...CCTCGGCGCTGAGCTGACAGAGTTCCTTTTGTATGCCAGTCCGCCATGACCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR TCA 90 bp ACTGGCGTCACATCACAGAAAACCTTATTTATGAGGTCCCATTGCCCTCGCAATCCAGCATCTCGCAGGTaGACAGAGCCAAGAGGACTT +
Preference number: 4 (lower is better)
Translates to: TGVTSQKTLFMRSHCPRNPASRR*TEPRGL
Trigger: AAGTCCTCTTGGCTCTGTTCACCTGCGAGATGCTGG...ATTGCGAGGGCAATGGGACCTCATAAATAAGGTTTTCTGTGATGTGACGCCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR TCA 90 bp GTGTCTTGGGCTCAGCATCAGATGTACAGACTCCAACCACCACTTGGAATCAGCAGTGCCTGGTCACTTTaGAGATTCTTAAGAGGCGCA +
Preference number: 4 (lower is better)
Translates to: VSWAQHQMYRLQPPLGISSAWSL*RFLRGA
Trigger: TGCGCCTCTTAAGAATCTTCAAAGTGACCAGGCACT...GCTGATTCCAAGTGGTGGTTGGAGTCTGTACATCTGATGCTGAGCCCAAGACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636938.1
CDS-3UTR TCA 90 bp AGCCACAAACGCCTTCCGACTAACCAGCTTGGTGCCGTAGCTCAGGCAGAAAATCATCCTTGTAGAGGATaGAAAGTCCCCTGCATTCTT +
Preference number: 4 (lower is better)
Translates to: SHKRLPTNQLGAVAQAENHPCRG*KVPCIL
Trigger: AAGAATGCAGGGGACTTTTCATCCTCTACAAGGATG...ATTTTCTGCCTGAGCTACGGCACCAAGCTGGTTAGTCGGAAGGCGTTTGTGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR TCA 90 bp TTTCAAGGCCTTAGCCACAAACGCCTTCCGACTAACCAGCTTGGTGCCGTAGCTGGACGTTGTCGAAGTTaGAATCACTGTTTTGCCAGA +
Preference number: 4 (lower is better)
Translates to: FQGLSHKRLPTNQLGAVAGRCRS*NHCFAR
Trigger: TCTGGCAAAACAGTGATTTCAACTTCGACAACGTCC...AGCTACGGCACCAAGCTGGTTAGTCGGAAGGCGTTTGTGGCTAAGGCCTTGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR TCA 90 bp TACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCTTTTCTCCTTGTTCCTaGAATGTAACGATGACAAAG +
Preference number: 4 (lower is better)
Translates to: YMGEADSTAVPIWTMGQGFSPCS*NVTMTK
Trigger: CTTTGTCATCGTTACATTTCAGGAACAAGGAGAAAA...GCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR TCA 90 bp CGTATTTCAGAACAGCTAAACAGGAACCAGGACGCAGTGTATTTGGGGGAAAGGGGCCGGCAACTGCCATaGTCTGTTGCTGCATTAGAT +
Preference number: 4 (lower is better)
Translates to: RISEQLNRNQDAVYLGERGRQLP*SVAALD
Trigger: ATCTAATGCAGCAACAGATCATGGCAGTTGCCGGCC...CCTTTCCCCCAAATACACTGCGTCCTGGTTCCTGTTTAGCTGTTCTGAAATACG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR TCA 90 bp AACCGTAACTATGGATACCCAAGGGGCAGAGCAGCCAGCTGGACCTGCTCTGTACCAGAGGATTTTCGCTaGATAAATGAGAATTGGCTC +
Preference number: 4 (lower is better)
Translates to: NRNYGYPRGRAASWTCSVPEDFR*INENWL
Trigger: GAGCCAATTCTCATTTATTCAGCGAAAATCCTCTGG...TACAGAGCAGGTCCAGCTGGCTGCTCTGCCCCTTGGGTATCCATAGTTACGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR TCA 90 bp CGTATTTCAGAACAGCTAAACAGGAACCAGGACGCAGTGTATTTGGGGGAAAGGCTGGCAATTTTGGCCTaGTGTGATGCCACAAGACCC +
Preference number: 4 (lower is better)
Translates to: RISEQLNRNQDAVYLGERLAILA*CDATRP
Trigger: GGGTCTTGTGGCATCACATCAGGCCAAAATTGCCAG...CCTTTCCCCCAAATACACTGCGTCCTGGTTCCTGTTTAGCTGTTCTGAAATACG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR TCA 90 bp GGTTCCCTGACTCCCAGTGTCCTTGAAACTAGACCACACTGCTTCCAAAGAGGCGCTGAGTTTGGATTTTaGGATGGCTTGACAGAGACT +
Preference number: 4 (lower is better)
Translates to: GSLTPSVLETRPHCFQRGAEFGF*DGLTET
Trigger: AGTCTCTGTCAAGCCATCTCAAAATCCAAACTCAGC...GCCTCTTTGGAAGCAGTGTGGTCTAGTTTCAAGGACACTGGGAGTCAGGGAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636938.1
CDS-3UTR TCA 90 bp TTTCCTGTGGACACGTTAAGATGGAACCTGAGGTGTTGCCTGGATTGGTTTTGGTCCCCAGACTGGCTCTaGGCACGAATTAAAGACGGA +
Preference number: 4 (lower is better)
Translates to: FPVDTLRWNLRCCLDWFWSPDWL*ARIKDG
Trigger: TCCGTCTTTAATTCGTGCTCAGAGCCAGTCTGGGGA...CCAAAACCAATCCAGGCAACACCTCAGGTTCCATCTTAACGTGTCCACAGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000645528.2
CDS-3UTR TCA 90 bp TTTGGGTGTGGTGGTGTTTCCTGTGGACACGTTAAGATGGAACCTGAGGTGTTGAGGTCACGCAGCAAGTaGATGCTGAAACTGGGACTA +
Preference number: 4 (lower is better)
Translates to: FGCGGVSCGHVKMEPEVLRSRSK*MLKLGL
Trigger: TAGTCCCAGTTTCAGCATTCACTTGCTGCGTGACCT...CAACACCTCAGGTTCCATCTTAACGTGTCCACAGGAAACACCACCACACCCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000645528.2
CDS-3UTR GCA 90 bp GTTAAGCTTTGTACGTTCCCTTTCACGAAAAAGAACCACCGTGAGCAACGTCCGTCCTACAGGTGGGGGTaGAGAGGTGCTCATAGTTTG +
Preference number: 4 (lower is better)
Translates to: VKLCTFPFTKKNHREQRPSYRWG*RGAHSL
Trigger: CAAACTATGAGCACCTCTGCACCCCCACCTGTAGGA...CGGACGTTGCTCACGGTGGTTCTTTTTCGTGAAAGGGAACGTACAAAGCTTAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR GCA 90 bp AGGAACCAGGAGGATAAGAATATCCATAATTTCAGAGCTGCCCTGGCACAGTACCAAAGCCTCCAGATTTaGCGCTTGAGTGGTTCCCGC +
Preference number: 4 (lower is better)
Translates to: RNQEDKNIHNFRAALAQYQSLQI*RLSGSR
Trigger: GCGGGAACCACTCAAGCGGCAAATCTGGAGGCTTTG...GTACTGTGCCAGGGCAGCTCTGAAATTATGGATATTCTTATCCTCCTGGTTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR GCA 90 bp AGGTTTGGGTGTGGTGGTGTTTCCTGTGGACACGTTAAGATGGAACCTGAGGTGCTGGAAATCTCCCCGTaGTTTTGCCTTCTCTCTTTC +
Preference number: 4 (lower is better)
Translates to: RFGCGGVSCGHVKMEPEVLEISP*FCLLSF
Trigger: GAAAGAGAGAAGGCAAAAGCACGGGGAGATTTCCAG...CACCTCAGGTTCCATCTTAACGTGTCCACAGGAAACACCACCACACCCAAACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636938.1
CDS-3UTR GCA 90 bp GTGTTTCCTGTGGACACGTTAAGATGGAACCTGAGGTGTTGCCTGGATTGGTTTAGGATGCCACTAAGTTaGTCAGGGAAGTCCAGTGCC +
Preference number: 4 (lower is better)
Translates to: VFPVDTLRWNLRCCLDWFRMPLS*SGKSSA
Trigger: GGCACTGGACTTCCCTGAGCAACTTAGTGGCATCCT...AAACCAATCCAGGCAACACCTCAGGTTCCATCTTAACGTGTCCACAGGAAACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR GCA 90 bp GCTGTTTCAGTAGAAATAAGCCCACTTGAGACTTTTCCCTTTCAAGGCCTTAGCCCAGGCCTCACCTGTTaGACACCTGAAGAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: AVSVEISPLETFPFQGLSPGLTC*TPEEQQ
Trigger: CTGCTGCTCTTCAGGTGTGCAACAGGTGAGGCCTGG...GCTAAGGCCTTGAAAGGGAAAAGTCTCAAGTGGGCTTATTTCTACTGAAACAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000636938.1
ENST00000638120.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR GCA 90 bp ACTGGCGTCACATCACAGAAAACCTTATTTATGAGGTCCCATTGCCCTCGCAATCTACTGAAATACTCCTaGTCCCCCAAGCAGTGGGGG +
Preference number: 4 (lower is better)
Translates to: TGVTSQKTLFMRSHCPRNLLKYS*SPKQWG
Trigger: CCCCCACTGCTTGGGGGAGCAGGAGTATTTCAGTAG...ATTGCGAGGGCAATGGGACCTCATAAATAAGGTTTTCTGTGATGTGACGCCAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR GCA 90 bp GTCACATCACAGAAAACCTTATTTATGAGGTCCCATTGCCCTCGCAATAATCACTCTTCCTGGCTGCTCTaGCGGCGCAGGCACTCAAAG +
Preference number: 4 (lower is better)
Translates to: VTSQKTLFMRSHCPRNNHSSWLL*RRRHSK
Trigger: CTTTGAGTGCCTGCGCCGGCAGAGCAGCCAGGAAGA...GTGATTATTGCGAGGGCAATGGGACCTCATAAATAAGGTTTTCTGTGATGTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR GCA 90 bp CACCAGTCCCCAGAGGACAAGAGCAGCTATATCTCATCCACCTATGCATTTCTGGCCATGATCTGTTGCTaGATTAGATGCAGAGGCAGG +
Preference number: 4 (lower is better)
Translates to: HQSPEDKSSYISSTYAFLAMICC*IRCRGR
Trigger: CCTGCCTCTGCATCTAATGCAGCAACAGATCATGGC...CAGAAATGCATAGGTGGATGAGATATAGCTGCTCTTGTCCTCTGGGGACTGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR GCA 90 bp ATCATGGAACTCTTGCCCAAAGAAAAGACTGCAAATAGTCATCTGGTATATCTTCCGGTAGGGAGGGGTTaGTGGAGGGGTGGCCCACGA +
Preference number: 4 (lower is better)
Translates to: IMELLPKEKTANSHLVYLPVGRG*WRGGPR
Trigger: TCGTGGGCCACCCCTCCAGCAACCCCTCCCTACCGG...AAGATATACCAGATGACTATTTGCAGTCTTTTCTTTGGGCAAGAGTTCCATGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR GCA 90 bp CCTGGTACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCCTAAGTTTACCTGGTTaGGAGTGCATTATTATTCCA +
Preference number: 4 (lower is better)
Translates to: PGTWEKQTPQQCPSGQWGLSLPG*ECIIIP
Trigger: TGGAATAATAATGCACTCGCAACCAGGTAAACTTAG...GCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTACCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR GCA 90 bp ATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCAGACTCCACTAAGTTTACCTGGTTaGGAGTGCATTATTATTCCA +
Preference number: 4 (lower is better)
Translates to: MPSVGWAWCPGTWEKQTPLSLPG*ECIIIP
Trigger: TGGAATAATAATGCACTCGCAACCAGGTAAACTTAG...TGGAGTCTGCTTCTCCCATGTACCAGGGCACCAGGCCCACCCAACTGAAGGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR GCA 90 bp CCTGGTACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGACCCATGGATATTaGTGCAGTTCAAATACAATA +
Preference number: 4 (lower is better)
Translates to: PGTWEKQTPQQCPSGQWGRTHGY*CSSNTI
Trigger: TATTGTATTTGAACTGCAGCAATATCCATGGGTCCT...GCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTACCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR GCA 90 bp TACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAAATCATGGAACTCTTaGCCAAAGAAAAGACTGCAA +
Preference number: 4 (lower is better)
Translates to: YMGEADSTAVPIWTMGQGKSWNS*PKKRLQ
Trigger: TTGCAGTCTTTTCTTTGGGCAAGAGTTCCATGATTT...GCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR GCA 90 bp CCAAGGGGCAGAGCAGCCAGCTGGACCTGCTCTGTAATTCACTTACTTACTTACGCAGCCAGCTGGACCTaGTCTGTAATTCACTTACTT +
Preference number: 4 (lower is better)
Translates to: PRGRAASWTCSVIHLLTYAASWT*SVIHLL
Trigger: AAGTAAGTGAATTACAGAGCAGGTCCAGCTGGCTGC...GTAAGTAAGTAAGTGAATTACAGAGCAGGTCCAGCTGGCTGCTCTGCCCCTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR GCA 90 bp GTTTCAGTAGAAATAAGCCCACTTGAGACTTTTCCCTTTCAAGGCCTTAGCCACTCCGGAGGAGTGCTTTaGTTGGAAGGGGTCTCCCTG +
Preference number: 4 (lower is better)
Translates to: VSVEISPLETFPFQGLSHSGGVL*LEGVSL
Trigger: CAGGGAGACCCCTTCCAAGCAAAGCACTCCTCCGGA...GTGGCTAAGGCCTTGAAAGGGAAAAGTCTCAAGTGGGCTTATTTCTACTGAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CCA 90 bp GTGTATCTGAGCTTCCTGGCCTGTCCACTTCTCACTGTATTCTGGACTGGGTCTACAGGACAGTTTGCTTaGAGCTATTCGGCTGAGAAG +
Preference number: 4 (lower is better)
Translates to: VYLSFLACPLLTVFWTGSTGQFA*SYSAEK
Trigger: CTTCTCAGCCGAATAGCTCCAAGCAAACTGTCCTGT...AGACCCAGTCCAGAATACAGTGAGAAGTGGACAGGCCAGGAAGCTCAGATACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR CCA 90 bp CAGACACTTAGGGTCCTGGTCTGGCAATTTTGGCCTGATGTGATGCCACAAGACGGACAACTTGTAAACTaGGCACTCCTGACACTAGTC +
Preference number: 4 (lower is better)
Translates to: QTLRVLVWQFWPDVMPQDGQLVN*ALLTLV
Trigger: GACTAGTGTCAGGAGTGCCCAGTTTACAAGTTGTCC...GTCTTGTGGCATCACATCAGGCCAAAATTGCCAGACCAGGACCCTAAGTGTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR CCA 90 bp GTTAAGCTTTGTACGTTCCCTTTCACGAAAAAGAACCACCGTGAGCAACGTCCGGTTTGGATTTTGAGATaGCTTGACCCCACCGCCGAC +
Preference number: 4 (lower is better)
Translates to: VKLCTFPFTKKNHREQRPVWILR*LDPTAD
Trigger: GTCGGCGGTGGGGTCAAGCCATCTCAAAATCCAAAC...CGGACGTTGCTCACGGTGGTTCTTTTTCGTGAAAGGGAACGTACAAAGCTTAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000640483.1
CDS-3UTR CCA 90 bp CACCAGTCCCCAGAGGACAAGAGCAGCTATATCTCATCCACCTATGCATTTCTGTCGCCTGTCAGGATCTaGAACACTGTGAGAAGTGCT +
Preference number: 4 (lower is better)
Translates to: HQSPEDKSSYISSTYAFLSPVRI*NTVRSA
Trigger: AGCACTTCTCACAGTGTTCCAGATCCTGACAGGCGA...CAGAAATGCATAGGTGGATGAGATATAGCTGCTCTTGTCCTCTGGGGACTGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR CCA 90 bp ATCATGGAACTCTTGCCCAAAGAAAAGACTGCAAATAGTCATCTGGTATATCTTAGGAGTGGCTGCGGATaGGGTCCTCTGCGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: IMELLPKEKTANSHLVYLRSGCG*GPLRPG
Trigger: CCCTGGCCGCAGAGGACCCCATCCGCAGCCACTCCT...AAGATATACCAGATGACTATTTGCAGTCTTTTCTTTGGGCAAGAGTTCCATGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR CCA 90 bp CCAAGGGGCAGAGCAGCCAGCTGGACCTGCTCTGTAATTCACTTACTTACTTACCAGAAGGCCCCTTTGTaGAGGAAAGCTCCAAAAGTT +
Preference number: 4 (lower is better)
Translates to: PRGRAASWTCSVIHLLTYQKAPL*RKAPKV
Trigger: AACTTTTGGAGCTTTCCTCCACAAAGGGGCCTTCTG...GTAAGTAAGTAAGTGAATTACAGAGCAGGTCCAGCTGGCTGCTCTGCCCCTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR CCA 90 bp CAGGACTTTGGAATGGAGTCAGATACCCACCTTAGGCAGGTCTGCTTAATCTTTGCCACGAAGACGCACTaGACCACGTGCTTAAGTCCT +
Preference number: 4 (lower is better)
Translates to: QDFGMESDTHLRQVCLIFATKTH*TTCLSP
Trigger: AGGACTTAAGCACGTGGTCCAGTGCGTCTTCGTGGC...AAAGATTAAGCAGACCTGCCTAAGGTGGGTATCTGACTCCATTCCAAAGTCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CCA 90 bp GGTTCCCTGACTCCCAGTGTCCTTGAAACTAGACCACACTGCTTCCAAAGAGGCGCCTGGGGAAACGTCTaGAAGTTATTGTTCCTATTG +
Preference number: 4 (lower is better)
Translates to: GSLTPSVLETRPHCFQRGAWGNV*KLLFLL
Trigger: CAATAGGAACAATAACTTCCAGACGTTTCCCCAGGC...GCCTCTTTGGAAGCAGTGTGGTCTAGTTTCAAGGACACTGGGAGTCAGGGAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000645528.2
CDS-3UTR CCA 90 bp TTTCAAGGCCTTAGCCACAAACGCCTTCCGACTAACCAGCTTGGTGCCGTAGCTGCCTGGGGAAACGTCTaGAAGTTATTGTTCCTATTG +
Preference number: 4 (lower is better)
Translates to: FQGLSHKRLPTNQLGAVAAWGNV*KLLFLL
Trigger: CAATAGGAACAATAACTTCCAGACGTTTCCCCAGGC...AGCTACGGCACCAAGCTGGTTAGTCGGAAGGCGTTTGTGGCTAAGGCCTTGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000636938.1
ENST00000638120.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CCA 90 bp CACCCCCAAAATAATCACACCAAATGGCCAAAGGGCTTTCTTTATCAGTTGGCCGTCACAGAGCTTCCCTaGGAGACAGGCCAGCATGAT +
Preference number: 4 (lower is better)
Translates to: HPQNNHTKWPKGFLYQLAVTELP*ETGQHD
Trigger: ATCATGCTGGCCTGTCTCCCAGGGAAGCTCTGTGAC...GGCCAACTGATAAAGAAAGCCCTTTGGCCATTTGGTGTGATTATTTTGGGGGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636627.1
CDS-3UTR CCA 90 bp AAACCGACCATCGGAGTGATATTCTCTTATGTAAACTGGCGTCACATCACAGAAAAGGAGGATCTCCGGTaGGATGCTGGGGTGGGAGGT +
Preference number: 4 (lower is better)
Translates to: KPTIGVIFSYVNWRHITEKEDLR*DAGVGG
Trigger: ACCTCCCACCCCAGCATCCCACCGGAGATCCTCCTT...TTCTGTGATGTGACGCCAGTTTACATAAGAGAATATCACTCCGATGGTCGGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CCA 90 bp TGTAATTCACTTACTTACTTACCAGAGGGTGGTTCAAGTCAAACAAACAAAACCGTAGGGAGGGGTTGCTaGAGGGGTGGCCCACGACCG +
Preference number: 4 (lower is better)
Translates to: CNSLTYLPEGGSSQTNKTVGRGC*RGGPRP
Trigger: CGGTCGTGGGCCACCCCTCCAGCAACCCCTCCCTAC...GGTTTTGTTTGTTTGACTTGAACCACCCTCTGGTAAGTAAGTAAGTGAATTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR CCA 90 bp GACTTACTTACACACCGTATTTCAGAACAGCTAAACAGGAACCAGGACGCAGTGGACAGTCAGGCTGGCTaGTGTGAAAGTCCGGTAGGA +
Preference number: 4 (lower is better)
Translates to: DLLTHRISEQLNRNQDAVDSQAG*CESPVG
Trigger: TCCTACCGGACTTTCACACCAGCCAGCCTGACTGTC...CACTGCGTCCTGGTTCCTGTTTAGCTGTTCTGAAATACGGTGTGTAAGTAAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CCA 90 bp TATCCAAAAGTGGGTTTTCATCAGGACGTACAGTCAGAGTGTGAGTGCATTCTAATCCCTCCCAGGGTCTaGCTCTTCGTCGCTGTAGCC +
Preference number: 4 (lower is better)
Translates to: YPKVGFHQDVQSECECILIPPRV*LFVAVA
Trigger: GGCTACAGCGACGAAGAGCCAGACCCTGGGAGGGAT...TAGAATGCACTCACACTCTGACTGTACGTCCTGATGAAAACCCACTTTTGGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR CCA 90 bp AGACAGTTGCAACCCATGGTGGATCCAAAGGTACAGTATCAAAATCATGGAACTATCCCTCCCAGGGTCTaGCTCTTCGTCGCTGTAGCC +
Preference number: 4 (lower is better)
Translates to: RQLQPMVDPKVQYQNHGTIPPRV*LFVAVA
Trigger: GGCTACAGCGACGAAGAGCCAGACCCTGGGAGGGAT...AGTTCCATGATTTTGATACTGTACCTTTGGATCCACCATGGGTTGCAACTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR CCA 90 bp GAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTGCTGCAAATAGTCATCTaGTATATCTTGTGGAAAGAT +
Preference number: 4 (lower is better)
Translates to: EKQTPQQCPSGQWGRAGLLQIVI*YILWKD
Trigger: ATCTTTCCACAAGATATACCAGATGACTATTTGCAG...CAGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR CCA 90 bp CTTAAGCAGCACCACCAGTCCCCAGAGGACAAGAGCAGCTATATCTCATCCACCAGTTGCAACCCATGGTaGATCCAAAGGTACAGTATC +
Preference number: 4 (lower is better)
Translates to: LKQHHQSPEDKSSYISSTSCNPW*IQRYSI
Trigger: GATACTGTACCTTTGGATCCACCATGGGTTGCAACT...GGTGGATGAGATATAGCTGCTCTTGTCCTCTGGGGACTGGTGGTGCTGCTTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR CCA 90 bp CAGACACTTAGGGTCCTGGTCTGGCAATTTTGGCCTGATGTGATGCCACAAGACGTATTAGGTTACCATTaGCACCGAAGGAACCAGGAG +
Preference number: 4 (lower is better)
Translates to: QTLRVLVWQFWPDVMPQDVLGYH*HRRNQE
Trigger: CTCCTGGTTCCTTCGGTGCCAATGGTAACCTAATAC...GTCTTGTGGCATCACATCAGGCCAAAATTGCCAGACCAGGACCCTAAGTGTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR CCA 90 bp GCTGTTTCAGTAGAAATAAGCCCACTTGAGACTTTTCCCTTTCAAGGCCTTAGCTGGAAGGGGTCTCCCTaGGGCCTTGGGTCTGCTTTT +
Preference number: 4 (lower is better)
Translates to: AVSVEISPLETFPFQGLSWKGSP*GLGSAF
Trigger: AAAAGCAGACCCAAGGCCCCAGGGAGACCCCTTCCA...GCTAAGGCCTTGAAAGGGAAAAGTCTCAAGTGGGCTTATTTCTACTGAAACAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000636938.1
ENST00000638120.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CCA 90 bp TACGTTCAAAGTGCTTTACAATCACTTAGCTATTCCTCACAACAGCCCTGTGAGGAGGAGTGCTTTGCTTaGAAGGGGTCTCCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: YVQSALQSLSYSSQQPCEEECFA*KGSPWG
Trigger: GCCCCAGGGAGACCCCTTCCAAGCAAAGCACTCCTC...CTCACAGGGCTGTTGTGAGGAATAGCTAAGTGATTGTAAAGCACTTTGAACGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000645528.2
CDS-3UTR CCA 90 bp GATGTGAAAATGCAACCTGCAGGGTTACCTCTGTTGACATCTTTGTGCATTGCCGGGCCTGTCAGTCTTTaGGAGTTCGGGCAAACTAGG +
Preference number: 4 (lower is better)
Translates to: DVKMQPAGLPLLTSLCIAGPVSL*EFGQTR
Trigger: CCTAGTTTGCCCGAACTCCCAAAGACTGACAGGCCC...GGCAATGCACAAAGATGTCAACAGAGGTAACCCTGCAGGTTGCATTTTCACATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636938.1
CDS-3UTR CCA 90 bp TTTCCTGTGGACACGTTAAGATGGAACCTGAGGTGTTGCCTGGATTGGTTTTGGCACTGTATTCTGGACTaGGTCTCTGCAGAGAGCAGG +
Preference number: 4 (lower is better)
Translates to: FPVDTLRWNLRCCLDWFWHCILD*VSAESR
Trigger: CCTGCTCTCTGCAGAGACCCAGTCCAGAATACAGTG...CCAAAACCAATCCAGGCAACACCTCAGGTTCCATCTTAACGTGTCCACAGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CCA 90 bp TCCTGTGGACACGTTAAGATGGAACCTGAGGTGTTGCCTGGATTGGTTTTGGCAGTGGACACGTTAAGATaGAACCTGAGGTGTTGCCTG +
Preference number: 4 (lower is better)
Translates to: SCGHVKMEPEVLPGLVLAVDTLR*NLRCCL
Trigger: CAGGCAACACCTCAGGTTCCATCTTAACGTGTCCAC...TGCCAAAACCAATCCAGGCAACACCTCAGGTTCCATCTTAACGTGTCCACAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CCA 90 bp GCTGTTTCAGTAGAAATAAGCCCACTTGAGACTTTTCCCTTTCAAGGCCTTAGCCAACCCCAAGGCTGCTaGACACAACCAGGTCTCTCC +
Preference number: 4 (lower is better)
Translates to: AVSVEISPLETFPFQGLSQPQGC*TQPGLS
Trigger: GGAGAGACCTGGTTGTGTCCAGCAGCCTTGGGGTTG...GCTAAGGCCTTGAAAGGGAAAAGTCTCAAGTGGGCTTATTTCTACTGAAACAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638120.1
CDS-3UTR CCA 90 bp CACCCCCAAAATAATCACACCAAATGGCCAAAGGGCTTTCTTTATCAGTTGGCCGCACTGACCACCAGCTaGAGGGACAACTTGGTCAAG +
Preference number: 4 (lower is better)
Translates to: HPQNNHTKWPKGFLYQLAALTTS*RDNLVK
Trigger: CTTGACCAAGTTGTCCCTCCAGCTGGTGGTCAGTGC...GGCCAACTGATAAAGAAAGCCCTTTGGCCATTTGGTGTGATTATTTTGGGGGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636627.1
3UTR CAA 72 bp GTTTCCTGTGGACACGTTAAGATGGAACCTGAGGTGTaGCCTGGATTGGTTTTGGCATGCGGGTGTATGTGT +
Preference number: 4 (lower is better)
Translates to: VSCGHVKMEPEV*PGLVLACGCMC
Trigger: ACACATACACCCGCATGCCAAAACCAATCCAGGCAACACCTCAGGTTCCATCTTAACGTGTCCACAGGAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR TCA 90 bp CTTAAGCAGCACCACCAGTCCCCAGAGGACAAGAGCAGCTATATCTCATCCACCTTCGGATGGGGTTATTaGGTGATAAACAGAAAAGGG +
Preference number: 4 (lower is better)
Translates to: LKQHHQSPEDKSSYISSTFGWGY*VINRKG
Trigger: CCCTTTTCTGTTTATCACTCAATAACCCCATCCGAA...GGTGGATGAGATATAGCTGCTCTTGTCCTCTGGGGACTGGTGGTGCTGCTTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR TCA 90 bp CACCAAATGGCCAAAGGGCTTTCTTTATCAGTTGGCCTTAATGCTCTAAATGATCTGGCGTCCATTCCCTaGGAACGCACATGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: HQMAKGLSLSVGLNALNDLASIP*ERTWSW
Trigger: CCAGCTCCATGTGCGTTCTCAGGGAATGGACGCCAG...ATCATTTAGAGCATTAAGGCCAACTGATAAAGAAAGCCCTTTGGCCATTTGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636627.1
CDS-3UTR TCA 90 bp GCTGTTTCAGTAGAAATAAGCCCACTTGAGACTTTTCCCTTTCAAGGCCTTAGCTCTCGCCTTCACCGCTaGCGTTCTCTGTGTTCACAG +
Preference number: 4 (lower is better)
Translates to: AVSVEISPLETFPFQGLSSRLHR*RSLCSQ
Trigger: CTGTGAACACAGAGAACGTCAGCGGTGAAGGCGAGA...GCTAAGGCCTTGAAAGGGAAAAGTCTCAAGTGGGCTTATTTCTACTGAAACAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR TCA 90 bp CACCCCCAAAATAATCACACCAAATGGCCAAAGGGCTTTCTTTATCAGTTGGCCGCTGAGTTTGGATTTTaGGATGGCTTGACCCCACCG +
Preference number: 4 (lower is better)
Translates to: HPQNNHTKWPKGFLYQLAAEFGF*DGLTPP
Trigger: CGGTGGGGTCAAGCCATCTCAAAATCCAAACTCAGC...GGCCAACTGATAAAGAAAGCCCTTTGGCCATTTGGTGTGATTATTTTGGGGGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000636627.1
CDS-3UTR TCA 90 bp CCTCTCCTTTGTCTGGAATGTTCTTCATATCACCCCCAAAATAATCACACCAAACCAGCCAGTAAAACGTaGCAGACTTCACGGCGGCCC +
Preference number: 4 (lower is better)
Translates to: PLLCLECSSYHPQNNHTKPASKT*QTSRRP
Trigger: GGGCCGCCGTGAAGTCTGTCACGTTTTACTGGCTGG...TTTGGTGTGATTATTTTGGGGGTGATATGAAGAACATTCCAGACAAAGGAGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000636627.1
CDS-3UTR TCA 90 bp GAGCTTCCTGGCCTGTCCACTTCTCACTGTATTCTGGACTGGGTCTCTGCAGAGAGCAATCAAACCGGTTaGAAAGAGAGACGAAATATG +
Preference number: 4 (lower is better)
Translates to: ELPGLSTSHCILDWVSAESNQTG*KERRNM
Trigger: CATATTTCGTCTCTCTTTTCAACCGGTTTGATTGCT...CTCTGCAGAGACCCAGTCCAGAATACAGTGAGAAGTGGACAGGCCAGGAAGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR TCA 90 bp TGCAACCCATGGTGGATCCAAAGGTACAGTATCAAAATCATGGAACTCTTGCCCTCCCCAGGGGAGACATaGTTTCCAGTTCCACCAAGA +
Preference number: 4 (lower is better)
Translates to: CNPWWIQRYSIKIMELLPSPGET*FPVPPR
Trigger: TCTTGGTGGAACTGGAAATCATGTCTCCCCTGGGGA...GGGCAAGAGTTCCATGATTTTGATACTGTACCTTTGGATCCACCATGGGTTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR TCA 90 bp CGTATTTCAGAACAGCTAAACAGGAACCAGGACGCAGTGTATTTGGGGGAAAGGGGATTGAATCCCAAATaGCACCAGAGACACCCCAAC +
Preference number: 4 (lower is better)
Translates to: RISEQLNRNQDAVYLGERGLNPK*HQRHPN
Trigger: GTTGGGGTGTCTCTGGTGTCATTTGGGATTCAATCC...CCTTTCCCCCAAATACACTGCGTCCTGGTTCCTGTTTAGCTGTTCTGAAATACG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR TCA 90 bp GTGTTTCCTGTGGACACGTTAAGATGGAACCTGAGGTGTTGCCTGGATTGGTTTGGATTGAATCCCAAATaGCACCAGAGACACCCCAAC +
Preference number: 4 (lower is better)
Translates to: VFPVDTLRWNLRCCLDWFGLNPK*HQRHPN
Trigger: GTTGGGGTGTCTCTGGTGTCATTTGGGATTCAATCC...AAACCAATCCAGGCAACACCTCAGGTTCCATCTTAACGTGTCCACAGGAAACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR TCA 90 bp CAGACACTTAGGGTCCTGGTCTGGCAATTTTGGCCTGATGTGATGCCACAAGACGGACGTTGTCGAAGTTaGAATCACTGTTTTGCCAGA +
Preference number: 4 (lower is better)
Translates to: QTLRVLVWQFWPDVMPQDGRCRS*NHCFAR
Trigger: TCTGGCAAAACAGTGATTTCAACTTCGACAACGTCC...GTCTTGTGGCATCACATCAGGCCAAAATTGCCAGACCAGGACCCTAAGTGTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR TCA 90 bp AATGTTGATCTTAAAACCCAAACTGGCCACTTTGGGTGTCTTGGGCTCAGCATCTGCTGCCGATTACGATaGGGGAGTCAAACGTGTTCC +
Preference number: 4 (lower is better)
Translates to: NVDLKTQTGHFGCLGLSICCRLR*GSQTCS
Trigger: GGAACACGTTTGACTCCCTCATCGTAATCGGCAGCA...GATGCTGAGCCCAAGACACCCAAAGTGGCCAGTTTGGGTTTTAAGATCAACATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636938.1
CDS-3UTR TCA 90 bp CGACACTCCAATCCTATAGATCACCACGTTGCTCCTCTGTCCCCAGCACCCCTTAAAGACGGAAAAAGGTaGTGGAGATTCTATTGCTCT +
Preference number: 4 (lower is better)
Translates to: RHSNPIDHHVAPLSPAPLKDGKR*WRFYCS
Trigger: AGAGCAATAGAATCTCCATCACCTTTTTCCGTCTTT...AAGGGGTGCTGGGGACAGAGGAGCAACGTGGTGATCTATAGGATTGGAGTGTCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR TCA 90 bp GTTTCAGTAGAAATAAGCCCACTTGAGACTTTTCCCTTTCAAGGCCTTAGCCACCCCGGGGTTGTAATCTaGCTCAGGGTCACAGAGCTT +
Preference number: 4 (lower is better)
Translates to: VSVEISPLETFPFQGLSHPGVVI*LRVTEL
Trigger: AAGCTCTGTGACCCTGAGTCAGATTACAACCCCGGG...GTGGCTAAGGCCTTGAAAGGGAAAAGTCTCAAGTGGGCTTATTTCTACTGAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000636938.1
ENST00000638120.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR TCA 90 bp TTTCAAGGCCTTAGCCACAAACGCCTTCCGACTAACCAGCTTGGTGCCGTAGCTAATTCATCTAAATGGTaGGGCCCCAAAATAGACCAG +
Preference number: 4 (lower is better)
Translates to: FQGLSHKRLPTNQLGAVANSSKW*GPKIDQ
Trigger: CTGGTCTATTTTGGGGCCTCACCATTTAGATGAATT...AGCTACGGCACCAAGCTGGTTAGTCGGAAGGCGTTTGTGGCTAAGGCCTTGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000636938.1
ENST00000638120.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR TCA 90 bp TTTGGGTGTGGTGGTGTTTCCTGTGGACACGTTAAGATGGAACCTGAGGTGTTGTGCGTCGAAGCAGAGTaGCCACATCAAGGTGTTTTA +
Preference number: 4 (lower is better)
Translates to: FGCGGVSCGHVKMEPEVLCVEAE*PHQGVL
Trigger: TAAAACACCTTGATGTGGTCACTCTGCTTCGACGCA...CAACACCTCAGGTTCCATCTTAACGTGTCCACAGGAAACACCACCACACCCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000645528.2
CDS-3UTR TCA 90 bp TCCTGTGGACACGTTAAGATGGAACCTGAGGTGTTGCCTGGATTGGTTTTGGCATGCGTCGAAGCAGAGTaGCCACATCAAGGTGTTTTA +
Preference number: 4 (lower is better)
Translates to: SCGHVKMEPEVLPGLVLACVEAE*PHQGVL
Trigger: TAAAACACCTTGATGTGGTCACTCTGCTTCGACGCA...TGCCAAAACCAATCCAGGCAACACCTCAGGTTCCATCTTAACGTGTCCACAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR TCA 90 bp AGGAACCAGGAGGATAAGAATATCCATAATTTCAGAGCTGCCCTGGCACAGTACAGCAGTGGGGGTCCCTaGAATAGCCATGTATCTCTG +
Preference number: 4 (lower is better)
Translates to: RNQEDKNIHNFRAALAQYSSGGP*NSHVSL
Trigger: CAGAGATACATGGCTATTTCAGGGACCCCCACTGCT...GTACTGTGCCAGGGCAGCTCTGAAATTATGGATATTCTTATCCTCCTGGTTCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR TCA 90 bp AGGAACCAGGAGGATAAGAATATCCATAATTTCAGAGCTGCCCTGGCACAGTACCCTTGGAGATCTCCGTaGATCATAGCAAACGGGCGA +
Preference number: 4 (lower is better)
Translates to: RNQEDKNIHNFRAALAQYPWRSP*IIANGR
Trigger: TCGCCCGTTTGCTATGATTCACGGAGATCTCCAAGG...GTACTGTGCCAGGGCAGCTCTGAAATTATGGATATTCTTATCCTCCTGGTTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR TCA 90 bp GACTTACTTACACACCGTATTTCAGAACAGCTAAACAGGAACCAGGACGCAGTGCCTTGGAGATCTCCGTaGATCATAGCAAACGGGCGA +
Preference number: 4 (lower is better)
Translates to: DLLTHRISEQLNRNQDAVPWRSP*IIANGR
Trigger: TCGCCCGTTTGCTATGATTCACGGAGATCTCCAAGG...CACTGCGTCCTGGTTCCTGTTTAGCTGTTCTGAAATACGGTGTGTAAGTAAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR TCA 90 bp GTCACATCACAGAAAACCTTATTTATGAGGTCCCATTGCCCTCGCAATAATCACGCAGGCACTCAAAGTTaGAGGAGGATCTCCGGTGGG +
Preference number: 4 (lower is better)
Translates to: VTSQKTLFMRSHCPRNNHAGTQS*RRISGG
Trigger: CCCACCGGAGATCCTCCTTCAACTTTGAGTGCCTGC...GTGATTATTGCGAGGGCAATGGGACCTCATAAATAAGGTTTTCTGTGATGTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR GCA 90 bp GTGTTTCCTGTGGACACGTTAAGATGGAACCTGAGGTGTTGCCTGGATTGGTTTTTGCCGCCAAACAGCTaGATCCCAAGCAAGGAAAAG +
Preference number: 4 (lower is better)
Translates to: VFPVDTLRWNLRCCLDWFLPPNS*IPSKEK
Trigger: CTTTTCCTTGCTTGGGATGCAGCTGTTTGGCGGCAA...AAACCAATCCAGGCAACACCTCAGGTTCCATCTTAACGTGTCCACAGGAAACAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR GCA 90 bp CAGACACTTAGGGTCCTGGTCTGGCAATTTTGGCCTGATGTGATGCCACAAGACGGAAATTGTCAAAGGTaGTCCGCTTGGTTTGCGTTT +
Preference number: 4 (lower is better)
Translates to: QTLRVLVWQFWPDVMPQDGNCQR*SAWFAF
Trigger: AAACGCAAACCAAGCGGAGCACCTTTGACAATTTCC...GTCTTGTGGCATCACATCAGGCCAAAATTGCCAGACCAGGACCCTAAGTGTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR GCA 90 bp TCTAATTATCCAAAAGTGGGTTTTCATCAGGACGTACAGTCAGAGTGTGAGTGCCCAGGCCTCACCTGTTaGACACCTGAAGAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: SNYPKVGFHQDVQSECECPGLTC*TPEEQQ
Trigger: CTGCTGCTCTTCAGGTGTGCAACAGGTGAGGCCTGG...GCACTCACACTCTGACTGTACGTCCTGATGAAAACCCACTTTTGGATAATTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR GCA 90 bp AGCCACAAACGCCTTCCGACTAACCAGCTTGGTGCCGTAGCTCAGGCAGAAAATAGACAATGGCAAAGTTaGTCCCACATGTATACTCCT +
Preference number: 4 (lower is better)
Translates to: SHKRLPTNQLGAVAQAENRQWQS*SHMYTP
Trigger: AGGAGTATACATGTGGGAGCAACTTTGCCATTGTCT...ATTTTCTGCCTGAGCTACGGCACCAAGCTGGTTAGTCGGAAGGCGTTTGTGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000636938.1
ENST00000638120.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR GCA 90 bp GTCACATCACAGAAAACCTTATTTATGAGGTCCCATTGCCCTCGCAATAATCACGAAGGCCTTTGGACATaGAGGGGACGGTGGGTGGTA +
Preference number: 4 (lower is better)
Translates to: VTSQKTLFMRSHCPRNNHEGLWT*RGRWVV
Trigger: TACCACCCACCGTCCCCTGCATGTCCAAAGGCCTTC...GTGATTATTGCGAGGGCAATGGGACCTCATAAATAAGGTTTTCTGTGATGTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR GCA 90 bp CAGTCCCCAGAGGACAAGAGCAGCTATATCTCATCCACCTATGCATTTCTGCACCAGAGTCGATGTTTCTaGCTGGGTATCTGCTGTAGT +
Preference number: 4 (lower is better)
Translates to: QSPEDKSSYISSTYAFLHQSRCF*LGICCS
Trigger: ACTACAGCAGATACCCAGGCAGAAACATCGACTCTG...GTGCAGAAATGCATAGGTGGATGAGATATAGCTGCTCTTGTCCTCTGGGGACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR GCA 90 bp TGTAATTCACTTACTTACTTACCAGAGGGTGGTTCAAGTCAAACAAACAAAACCGGACCTCTTCCTGGCTaGTCTGCCGGCGCAGGCACT +
Preference number: 4 (lower is better)
Translates to: CNSLTYLPEGGSSQTNKTGPLPG*SAGAGT
Trigger: AGTGCCTGCGCCGGCAGAGCAGCCAGGAAGAGGTCC...GGTTTTGTTTGTTTGACTTGAACCACCCTCTGGTAAGTAAGTAAGTGAATTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR GCA 90 bp CACCAGTCCCCAGAGGACAAGAGCAGCTATATCTCATCCACCTATGCATTTCTGACTGCCATGATCTGTTaGTGCATTAGATGCAGAGGC +
Preference number: 4 (lower is better)
Translates to: HQSPEDKSSYISSTYAFLTAMIC*CIRCRG
Trigger: GCCTCTGCATCTAATGCAGCAACAGATCATGGCAGT...CAGAAATGCATAGGTGGATGAGATATAGCTGCTCTTGTCCTCTGGGGACTGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR GCA 90 bp AACAAACTAGTGTATCTAAGTTTACCTGGTTGCGAGTGCATTATTATTCCAGTTCCGGTAGGGAGGGGTTaGTGGAGGGGTGGCCCACGA +
Preference number: 4 (lower is better)
Translates to: NKLVYLSLPGCECIIIPVPVGRG*WRGGPR
Trigger: TCGTGGGCCACCCCTCCAGCAACCCCTCCCTACCGG...AACTGGAATAATAATGCACTCGCAACCAGGTAAACTTAGATACACTAGTTTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR GCA 90 bp AACAAACTAGTGTATCTAAGTTTACCTGGTTGCGAGTGCATTATTATTCCAGTTTACCAGGAGCTGCGGTaGAGGGACGGCAGGCTGCCG +
Preference number: 4 (lower is better)
Translates to: NKLVYLSLPGCECIIIPVYQELR*RDGRLP
Trigger: CGGCAGCCTGCCGTCCCTGCACCGCAGCTCCTGGTA...AACTGGAATAATAATGCACTCGCAACCAGGTAAACTTAGATACACTAGTTTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR GCA 90 bp GACAGTTGCAACCCATGGTGGATCCAAAGGTACAGTATCAAAATCATGGAACTCAAGCAGGGTGCTGGCTaGACTCTCCATCTCGTCGAT +
Preference number: 4 (lower is better)
Translates to: DSCNPWWIQRYSIKIMELKQGAG*TLHLVD
Trigger: ATCGACGAGATGGAGAGTGCAGCCAGCACCCTGCTT...GAGTTCCATGATTTTGATACTGTACCTTTGGATCCACCATGGGTTGCAACTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR GCA 90 bp GTGCATTCTAATGAAAACTTCAGCCCTCATTCAATTGCATATAAAAGCCCTCAAAGGCCAGAGCCAGTCTaGCCCTCGCTGGGGGCTACA +
Preference number: 4 (lower is better)
Translates to: VHSNENFSPHSIAYKSPQRPEPV*PSLGAT
Trigger: TGTAGCCCCCAGCGAGGGGCAGACTGGCTCTGGCCT...TTGAGGGCTTTTATATGCAATTGAATGAGGGCTGAAGTTTTCATTAGAATGCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR GCA 90 bp AAACCGACCATCGGAGTGATATTCTCTTATGTAAACTGGCGTCACATCACAGAACAGACTCCACAGCAGTaGCCATCTGGACAATGGGGC +
Preference number: 4 (lower is better)
Translates to: KPTIGVIFSYVNWRHITEQTPQQ*PSGQWG
Trigger: GCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTG...TTCTGTGATGTGACGCCAGTTTACATAAGAGAATATCACTCCGATGGTCGGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR GCA 90 bp GGTGATGCATATCATTTCATCCGCCAGGTCCTCCTCATCCCTCCCAGGGTCTGGACCCATGGATATTGCTaGAGTTCAAATACAATACAG +
Preference number: 4 (lower is better)
Translates to: GDAYHFIRQVLLIPPRVWTHGYC*SSNTIQ
Trigger: CTGTATTGTATTTGAACTGCAGCAATATCCATGGGT...CCAGACCCTGGGAGGGATGAGGAGGACCTGGCGGATGAAATGATATGCATCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636448.1
CDS-3UTR GCA 90 bp CACCAGTCCCCAGAGGACAAGAGCAGCTATATCTCATCCACCTATGCATTTCTGGCAGCCAGCTGGACCTaGTCTGTAATTCACTTACTT +
Preference number: 4 (lower is better)
Translates to: HQSPEDKSSYISSTYAFLAASWT*SVIHLL
Trigger: AAGTAAGTGAATTACAGAGCAGGTCCAGCTGGCTGC...CAGAAATGCATAGGTGGATGAGATATAGCTGCTCTTGTCCTCTGGGGACTGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR GCA 90 bp GACTTACTTACACACCGTATTTCAGAACAGCTAAACAGGAACCAGGACGCAGTGTATAGATCACCACGTTaGTCCTCTGTCCCCAGCACC +
Preference number: 4 (lower is better)
Translates to: DLLTHRISEQLNRNQDAVYRSPR*SSVPST
Trigger: GGTGCTGGGGACAGAGGAGCAACGTGGTGATCTATA...CACTGCGTCCTGGTTCCTGTTTAGCTGTTCTGAAATACGGTGTGTAAGTAAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR GCA 90 bp ACTGACTTTGGAAAAGATCATCGCCTCTATCAGACACTTAGGGTCCTGGTCTGGATTGCAGGGAATCCCTaGCAAGGTAACCTGACAGTC +
Preference number: 4 (lower is better)
Translates to: TDFGKDHRLYQTLRVLVWIAGNP*QGNLTV
Trigger: GACTGTCAGGTTACCTTGGCAGGGATTCCCTGCAAT...CCAGACCAGGACCCTAAGTGTCTGATAGAGGCGATGATCTTTTCCAAAGTCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR GCA 90 bp CTTAAGCAGCACCACCAGTCCCCAGAGGACAAGAGCAGCTATATCTCATCCACCATCTATCTTTTTGATTaGAGGGAATCCCTGCCAAGG +
Preference number: 4 (lower is better)
Translates to: LKQHHQSPEDKSSYISSTIYLFD*RESLPR
Trigger: CCTTGGCAGGGATTCCCTGCAATCAAAAAGATAGAT...GGTGGATGAGATATAGCTGCTCTTGTCCTCTGGGGACTGGTGGTGCTGCTTAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR GCA 90 bp ATGTCAGGAAAGAGTCATTTACAAACCTTGAAGTGTTTTTGCCTGGATCAGAGTCCCTGGCACAGTACCTaGCCTGTCGGAGGCTCTCAC +
Preference number: 4 (lower is better)
Translates to: MSGKSHLQTLKCFCLDQSPWHST*PVGGSH
Trigger: GTGAGAGCCTCCGACAGGGCAGGTACTGTGCCAGGG...ACTCTGATCCAGGCAAAAACACTTCAAGGTTTGTAAATGACTCTTTCCTGACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR CCA 90 bp GACTTACTTACACACCGTATTTCAGAACAGCTAAACAGGAACCAGGACGCAGTGGAGGTGCTCATAGTTTaGGCAGCCTTGGCCTGTCTA +
Preference number: 4 (lower is better)
Translates to: DLLTHRISEQLNRNQDAVEVLIV*AALACL
Trigger: TAGACAGGCCAAGGCTGCCCAAACTATGAGCACCTC...CACTGCGTCCTGGTTCCTGTTTAGCTGTTCTGAAATACGGTGTGTAAGTAAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CCA 90 bp GTTTCAGTAGAAATAAGCCCACTTGAGACTTTTCCCTTTCAAGGCCTTAGCCACGAGAGATCCTACAGGTaGGGGTGCAGAGGTGCTCAT +
Preference number: 4 (lower is better)
Translates to: VSVEISPLETFPFQGLSHERSYR*GCRGAH
Trigger: ATGAGCACCTCTGCACCCCCACCTGTAGGATCTCTC...GTGGCTAAGGCCTTGAAAGGGAAAAGTCTCAAGTGGGCTTATTTCTACTGAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR CCA 90 bp ACTGGCGTCACATCACAGAAAACCTTATTTATGAGGTCCCATTGCCCTCGCAATGGGCAGGTCGGCTGTTaGACGAGTTACCCTGTTTTT +
Preference number: 4 (lower is better)
Translates to: TGVTSQKTLFMRSHCPRNGQVGC*TSYPVF
Trigger: AAAAACAGGGTAACTCGTCCAACAGCCGACCTGCCC...ATTGCGAGGGCAATGGGACCTCATAAATAAGGTTTTCTGTGATGTGACGCCAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CCA 90 bp CAGGACTTTGGAATGGAGTCAGATACCCACCTTAGGCAGGTCTGCTTAATCTTTGGGCAGGTCGGCTGTTaGACGAGTTACCCTGTTTTT +
Preference number: 4 (lower is better)
Translates to: QDFGMESDTHLRQVCLIFGQVGC*TSYPVF
Trigger: AAAAACAGGGTAACTCGTCCAACAGCCGACCTGCCC...AAAGATTAAGCAGACCTGCCTAAGGTGGGTATCTGACTCCATTCCAAAGTCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR CCA 90 bp GACTTACTTACACACCGTATTTCAGAACAGCTAAACAGGAACCAGGACGCAGTGCCATTGGCAGTACACTaGCGTCCATTCCCTGAGAAC +
Preference number: 4 (lower is better)
Translates to: DLLTHRISEQLNRNQDAVPLAVH*RPFPEN
Trigger: GTTCTCAGGGAATGGACGCCAGTGTACTGCCAATGG...CACTGCGTCCTGGTTCCTGTTTAGCTGTTCTGAAATACGGTGTGTAAGTAAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CCA 90 bp CACCCCCAAAATAATCACACCAAATGGCCAAAGGGCTTTCTTTATCAGTTGGCCCCATTGGCAGTACACTaGCGTCCATTCCCTGAGAAC +
Preference number: 4 (lower is better)
Translates to: HPQNNHTKWPKGFLYQLAPLAVH*RPFPEN
Trigger: GTTCTCAGGGAATGGACGCCAGTGTACTGCCAATGG...GGCCAACTGATAAAGAAAGCCCTTTGGCCATTTGGTGTGATTATTTTGGGGGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000636627.1
CDS-3UTR CCA 90 bp GATGTGAAAATGCAACCTGCAGGGTTACCTCTGTTGACATCTTTGTGCATTGCCCCATTGGCAGTACACTaGCGTCCATTCCCTGAGAAC +
Preference number: 4 (lower is better)
Translates to: DVKMQPAGLPLLTSLCIAPLAVH*RPFPEN
Trigger: GTTCTCAGGGAATGGACGCCAGTGTACTGCCAATGG...GGCAATGCACAAAGATGTCAACAGAGGTAACCCTGCAGGTTGCATTTTCACATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636938.1
CDS-3UTR CCA 90 bp GAAATGGCGCTCCCTGCGGCTGGTATTAGGTTACCATTGGCACCGAAGGAACCAAAGCGATGGACTTCATaGAGTTTAATAAGGATGCCA +
Preference number: 4 (lower is better)
Translates to: EMALPAAGIRLPLAPKEPKRWTS*SLIRMP
Trigger: TGGCATCCTTATTAAACTCCATGAAGTCCATCGCTT...TGGTTCCTTCGGTGCCAATGGTAACCTAATACCAGCCGCAGGGAGCGCCATTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR CCA 90 bp TTTCAAGGCCTTAGCCACAAACGCCTTCCGACTAACCAGCTTGGTGCCGTAGCTCAAAGGTGCTCCGCTTaGTTTGCGTTTCATCAAAAT +
Preference number: 4 (lower is better)
Translates to: FQGLSHKRLPTNQLGAVAQRCSA*FAFHQN
Trigger: ATTTTGATGAAACGCAAACCAAGCGGAGCACCTTTG...AGCTACGGCACCAAGCTGGTTAGTCGGAAGGCGTTTGTGGCTAAGGCCTTGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR CCA 90 bp TTTCCTGTGGACACGTTAAGATGGAACCTGAGGTGTTGCCTGGATTGGTTTTGGTCGCCTGTCAGGATCTaGAACACTGTGAGAAGTGCT +
Preference number: 4 (lower is better)
Translates to: FPVDTLRWNLRCCLDWFWSPVRI*NTVRSA
Trigger: AGCACTTCTCACAGTGTTCCAGATCCTGACAGGCGA...CCAAAACCAATCCAGGCAACACCTCAGGTTCCATCTTAACGTGTCCACAGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR CCA 90 bp AGCCACAAACGCCTTCCGACTAACCAGCTTGGTGCCGTAGCTCAGGCAGAAAATCTAGGCTCTCTTTTCTaGCAATCTTTTTCCTCTCCT +
Preference number: 4 (lower is better)
Translates to: SHKRLPTNQLGAVAQAENLGSLF*QSFSSP
Trigger: AGGAGAGGAAAAAGATTGCCAGAAAAGAGAGCCTAG...ATTTTCTGCCTGAGCTACGGCACCAAGCTGGTTAGTCGGAAGGCGTTTGTGGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR CCA 90 bp TTCTTAAGCAGCACCACCAGTCCCCAGAGGACAAGAGCAGCTATATCTCATCCAAGGTTGGTGAAGATGTaGTGGTTGATGAGCTTGTGG +
Preference number: 4 (lower is better)
Translates to: FLSSTTSPQRTRAAISHPRLVKM*WLMSLW
Trigger: CCACAAGCTCATCAACCACCACATCTTCACCAACCT...TGGATGAGATATAGCTGCTCTTGTCCTCTGGGGACTGGTGGTGCTGCTTAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR CCA 90 bp TTTGGGTGTGGTGGTGTTTCCTGTGGACACGTTAAGATGGAACCTGAGGTGTTGAGGTTGGTGAAGATGTaGTGGTTGATGAGCTTGTGG +
Preference number: 4 (lower is better)
Translates to: FGCGGVSCGHVKMEPEVLRLVKM*WLMSLW
Trigger: CCACAAGCTCATCAACCACCACATCTTCACCAACCT...CAACACCTCAGGTTCCATCTTAACGTGTCCACAGGAAACACCACCACACCCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636938.1
CDS-3UTR CCA 90 bp CACCAGTCCCCAGAGGACAAGAGCAGCTATATCTCATCCACCTATGCATTTCTGCAGAAGGCCCCTTTGTaGAGGAAAGCTCCAAAAGTT +
Preference number: 4 (lower is better)
Translates to: HQSPEDKSSYISSTYAFLQKAPL*RKAPKV
Trigger: AACTTTTGGAGCTTTCCTCCACAAAGGGGCCTTCTG...CAGAAATGCATAGGTGGATGAGATATAGCTGCTCTTGTCCTCTGGGGACTGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR CCA 90 bp TCCTGTGGACACGTTAAGATGGAACCTGAGGTGTTGCCTGGATTGGTTTTGGCACTCCATTCGAGTCGATaGCTTTATACAGCAACGCAG +
Preference number: 4 (lower is better)
Translates to: SCGHVKMEPEVLPGLVLALHSSR*LYTATQ
Trigger: CTGCGTTGCTGTATAAAGCCATCGACTCGAATGGAG...TGCCAAAACCAATCCAGGCAACACCTCAGGTTCCATCTTAACGTGTCCACAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CCA 90 bp GTTAAGCTTTGTACGTTCCCTTTCACGAAAAAGAACCACCGTGAGCAACGTCCGGCGGTGGTTGTAGATTaGGCCGATGTTCTCTCCATT +
Preference number: 4 (lower is better)
Translates to: VKLCTFPFTKKNHREQRPAVVVD*ADVLSI
Trigger: AATGGAGAGAACATCGGCCCAATCTACAACCACCGC...CGGACGTTGCTCACGGTGGTTCTTTTTCGTGAAAGGGAACGTACAAAGCTTAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CCA 90 bp CACTCTCTGGACTTTCTGGAGACACTAGCATTAAAACCAAAGCACTGGCCAAGGACTGGTAGGGGTTTTTaGGGATGTATCTCCGCAAGG +
Preference number: 4 (lower is better)
Translates to: HSLDFLETLALKPKHWPRTGRGF*GCISAR
Trigger: CCTTGCGGAGATACATCCCCAAAAACCCCTACCAGT...CCTTGGCCAGTGCTTTGGTTTTAATGCTAGTGTCTCCAGAAAGTCCAGAGAGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000636627.1
CDS-3UTR CCA 90 bp GTTTCAGTAGAAATAAGCCCACTTGAGACTTTTCCCTTTCAAGGCCTTAGCCACGTCACAGAGCTTCCCTaGGAGACAGGCCAGCATGAT +
Preference number: 4 (lower is better)
Translates to: VSVEISPLETFPFQGLSHVTELP*ETGQHD
Trigger: ATCATGCTGGCCTGTCTCCCAGGGAAGCTCTGTGAC...GTGGCTAAGGCCTTGAAAGGGAAAAGTCTCAAGTGGGCTTATTTCTACTGAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000636938.1
ENST00000638120.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CCA 90 bp ATACCCAAGGGGCAGAGCAGCCAGCTGGACCTGCTCTGTAATTCACTTACTTACGCTGGAGGGACAACTTaGTCAAGTAATTTCATGCTG +
Preference number: 4 (lower is better)
Translates to: IPKGQSSQLDLLCNSLTYAGGTT*SSNFML
Trigger: CAGCATGAAATTACTTGACCAAGTTGTCCCTCCAGC...GTAAGTAAGTGAATTACAGAGCAGGTCCAGCTGGCTGCTCTGCCCCTTGGGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR CCA 90 bp CGTATTTCAGAACAGCTAAACAGGAACCAGGACGCAGTGTATTTGGGGGAAAGGCTCATCATCACCAGCTaGAGGGACAACTTGGTCAAG +
Preference number: 4 (lower is better)
Translates to: RISEQLNRNQDAVYLGERLIITS*RDNLVK
Trigger: CTTGACCAAGTTGTCCCTCCAGCTGGTGATGATGAG...CCTTTCCCCCAAATACACTGCGTCCTGGTTCCTGTTTAGCTGTTCTGAAATACG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CCA 90 bp GACTTACTTACACACCGTATTTCAGAACAGCTAAACAGGAACCAGGACGCAGTGGACGGTGGGTGGTATTaGTCTGCTGAAGGGAATCTC +
Preference number: 4 (lower is better)
Translates to: DLLTHRISEQLNRNQDAVDGGWY*SAEGNL
Trigger: GAGATTCCCTTCAGCAGACCAATACCACCCACCGTC...CACTGCGTCCTGGTTCCTGTTTAGCTGTTCTGAAATACGGTGTGTAAGTAAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CCA 90 bp GACAGTTGCAACCCATGGTGGATCCAAAGGTACAGTATCAAAATCATGGAACTCGGAATTGAAGGCCTTTaGACATGCAGGGGACGGTGG +
Preference number: 4 (lower is better)
Translates to: DSCNPWWIQRYSIKIMELGIEGL*TCRGRW
Trigger: CCACCGTCCCCTGCATGTCCAAAGGCCTTCAATTCC...GAGTTCCATGATTTTGATACTGTACCTTTGGATCCACCATGGGTTGCAACTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR CCA 90 bp TACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCGAACTTGCTTTCCTATaGAATTATGGTTATGATGGT +
Preference number: 4 (lower is better)
Translates to: YMGEADSTAVPIWTMGQGELAFL*NYGYDG
Trigger: ACCATCATAACCATAATTCCATAGGAAAGCAAGTTC...GCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CCA 90 bp ACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGAACTTGCTTTCCTATaGAATTATGGTTATGATGGT +
Preference number: 4 (lower is better)
Translates to: TWEKQTPQQCPSGQWGRAELAFL*NYGYDG
Trigger: ACCATCATAACCATAATTCCATAGGAAAGCAAGTTC...TGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CCA 90 bp ACTGGCGTCACATCACAGAAAACCTTATTTATGAGGTCCCATTGCCCTCGCAATCTGGGCCGCTTTCCATaGGCAGCTTTGGACATATTG +
Preference number: 4 (lower is better)
Translates to: TGVTSQKTLFMRSHCPRNLGRFP*AALDIL
Trigger: CAATATGTCCAAAGCTGCCCATGGAAAGCGGCCCAG...ATTGCGAGGGCAATGGGACCTCATAAATAAGGTTTTCTGTGATGTGACGCCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CCA 90 bp AACCGTAACTATGGATACCCAAGGGGCAGAGCAGCCAGCTGGACCTGCTCTGTAAGGACGCAGTGTATTTaGGGGAAAGGGTTTAAAAAT +
Preference number: 4 (lower is better)
Translates to: NRNYGYPRGRAASWTCSVRTQCI*GKGFKN
Trigger: ATTTTTAAACCCTTTCCCCCAAATACACTGCGTCCT...TACAGAGCAGGTCCAGCTGGCTGCTCTGCCCCTTGGGTATCCATAGTTACGGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR CCA 90 bp ATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCAGACTCCAGTATCTAAGTTTACCTaGTTGCGAGTGCATTATTAT +
Preference number: 4 (lower is better)
Translates to: MPSVGWAWCPGTWEKQTPVSKFT*LRVHYY
Trigger: ATAATAATGCACTCGCAACCAGGTAAACTTAGATAC...TGGAGTCTGCTTCTCCCATGTACCAGGGCACCAGGCCCACCCAACTGAAGGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CCA 90 bp TCATCACCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCTGCAAATAGTCATCTaGTATATCTTGTGGAAAGAT +
Preference number: 4 (lower is better)
Translates to: SSPLTFPCTPPPCLQLGGLQIVI*YILWKD
Trigger: ATCTTTCCACAAGATATACCAGATGACTATTTGCAG...CCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGGTGATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR CCA 90 bp CGTATTTCAGAACAGCTAAACAGGAACCAGGACGCAGTGTATTTGGGGGAAAGGCTTAGGGTCCTGGTCTaGCAATTTTGGCCTGATGTG +
Preference number: 4 (lower is better)
Translates to: RISEQLNRNQDAVYLGERLRVLV*QFWPDV
Trigger: CACATCAGGCCAAAATTGCCAGACCAGGACCCTAAG...CCTTTCCCCCAAATACACTGCGTCCTGGTTCCTGTTTAGCTGTTCTGAAATACG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR CCA 90 bp AAGGGAAAACTGTTAAGCTTTGTACGTTCCCTTTCACGAAAAAGAACCACCGTGTGGAAGGGGTCTCCCTaGGGCCTTGGGTCTGCTTTT +
Preference number: 4 (lower is better)
Translates to: KGKLLSFVRSLSRKRTTVWKGSP*GLGSAF
Trigger: AAAAGCAGACCCAAGGCCCCAGGGAGACCCCTTCCA...CACGGTGGTTCTTTTTCGTGAAAGGGAACGTACAAAGCTTAACAGTTTTCCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CCA 90 bp CAGGACTTTGGAATGGAGTCAGATACCCACCTTAGGCAGGTCTGCTTAATCTTTCACTGTATTCTGGACTaGGTCTCTGCAGAGAGCAGG +
Preference number: 4 (lower is better)
Translates to: QDFGMESDTHLRQVCLIFHCILD*VSAESR
Trigger: CCTGCTCTCTGCAGAGACCCAGTCCAGAATACAGTG...AAAGATTAAGCAGACCTGCCTAAGGTGGGTATCTGACTCCATTCCAAAGTCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CCA 90 bp GATGTGAAAATGCAACCTGCAGGGTTACCTCTGTTGACATCTTTGTGCATTGCCGAGGTTTGGGTGTGGTaGTGTTTCCTGTGGACACGT +
Preference number: 4 (lower is better)
Translates to: DVKMQPAGLPLLTSLCIAEVWVW*CFLWTR
Trigger: ACGTGTCCACAGGAAACACCACCACACCCAAACCTC...GGCAATGCACAAAGATGTCAACAGAGGTAACCCTGCAGGTTGCATTTTCACATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636938.1
3UTR CAA 72 bp GGGCTCAGCATCAGATGTACAGACTCCAACCACCACTaGGAATCAGCTGAGAATTCAAGATCAGACACCCTT +
Preference number: 4 (lower is better)
Translates to: GLSIRCTDSNHH*ESAENSRSDTL
Trigger: AAGGGTGTCTGATCTTGAATTCTCAGCTGATTCCAAGTGGTGGTTGGAGTCTGTACATCTGATGCTGAGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636938.1
3UTR CAA 72 bp TTGATCTTAAAACCCAAACTGGCCACTTTGGGTGTCTaGGGCTCAGCATCAGATGTACAGACTCCAACCACC +
Preference number: 4 (lower is better)
Translates to: LILKPKLATLGV*GSASDVQTPTT
Trigger: GGTGGTTGGAGTCTGTACATCTGATGCTGAGCCCAAGACACCCAAAGTGGCCAGTTTGGGTTTTAAGATCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636938.1
3UTR CAA 72 bp ATGCTGGGCCGCTTTCCATGGGCAGCTTTGGACATATaGGCATTATTGAGATTGGCATTTGTTGAGGTGGGA +
Preference number: 4 (lower is better)
Translates to: MLGRFPWAALDI*ALLRLAFVEVG
Trigger: TCCCACCTCAACAAATGCCAATCTCAATAATGCCAATATGTCCAAAGCTGCCCATGGAAAGCGGCCCAGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636448.1
CDS-3UTR TCA 90 bp TTTCCTGTGGACACGTTAAGATGGAACCTGAGGTGTTGCCTGGATTGGTTTTGGCTCTTGGCGTATTGCTaGCGTTTTCTTTGGGAGAGA +
Preference number: 4 (lower is better)
Translates to: FPVDTLRWNLRCCLDWFWLLAYC*RFLWER
Trigger: TCTCTCCCAAAGAAAACGTCAGCAATACGCCAAGAG...CCAAAACCAATCCAGGCAACACCTCAGGTTCCATCTTAACGTGTCCACAGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR TCA 90 bp TATCCAAAAGTGGGTTTTCATCAGGACGTACAGTCAGAGTGTGAGTGCATTCTACCAGCATCTCGCAGGTaGACAGAGCCAAGAGGACTT +
Preference number: 4 (lower is better)
Translates to: YPKVGFHQDVQSECECILPASRR*TEPRGL
Trigger: AAGTCCTCTTGGCTCTGTTCACCTGCGAGATGCTGG...TAGAATGCACTCACACTCTGACTGTACGTCCTGATGAAAACCCACTTTTGGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR TCA 90 bp TGTTCTTCATATCACCCCCAAAATAATCACACCAAATGGCCAAAGGGCTTTCTTGCAGACGATCATTCCTaGAGAGGATGGGCCCCCGTA +
Preference number: 4 (lower is better)
Translates to: CSSYHPQNNHTKWPKGFLADDHS*RGWAPV
Trigger: TACGGGGGCCCATCCTCTTCAGGAATGATCGTCTGC...AAGAAAGCCCTTTGGCCATTTGGTGTGATTATTTTGGGGGTGATATGAAGAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000636627.1
CDS-3UTR TCA 90 bp GTTTCAGTAGAAATAAGCCCACTTGAGACTTTTCCCTTTCAAGGCCTTAGCCACTGCTGCCGATTACGATaGGGGAGTCAAACGTGTTCC +
Preference number: 4 (lower is better)
Translates to: VSVEISPLETFPFQGLSHCCRLR*GSQTCS
Trigger: GGAACACGTTTGACTCCCTCATCGTAATCGGCAGCA...GTGGCTAAGGCCTTGAAAGGGAAAAGTCTCAAGTGGGCTTATTTCTACTGAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000638120.1
CDS-3UTR TCA 90 bp GGTTCCCTGACTCCCAGTGTCCTTGAAACTAGACCACACTGCTTCCAAAGAGGCAAAGACGGAAAAAGGTaGTGGAGATTCTATTGCTCT +
Preference number: 4 (lower is better)
Translates to: GSLTPSVLETRPHCFQRGKDGKR*WRFYCS
Trigger: AGAGCAATAGAATCTCCATCACCTTTTTCCGTCTTT...GCCTCTTTGGAAGCAGTGTGGTCTAGTTTCAAGGACACTGGGAGTCAGGGAACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000645528.2
CDS-3UTR TCA 90 bp AGACAGTTGCAACCCATGGTGGATCCAAAGGTACAGTATCAAAATCATGGAACTCCCGGGGTTGTAATCTaGCTCAGGGTCACAGAGCTT +
Preference number: 4 (lower is better)
Translates to: RQLQPMVDPKVQYQNHGTPGVVI*LRVTEL
Trigger: AAGCTCTGTGACCCTGAGTCAGATTACAACCCCGGG...AGTTCCATGATTTTGATACTGTACCTTTGGATCCACCATGGGTTGCAACTGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR TCA 90 bp AAGGGAAAACTGTTAAGCTTTGTACGTTCCCTTTCACGAAAAAGAACCACCGTGCCCGGGGTTGTAATCTaGCTCAGGGTCACAGAGCTT +
Preference number: 4 (lower is better)
Translates to: KGKLLSFVRSLSRKRTTVPGVVI*LRVTEL
Trigger: AAGCTCTGTGACCCTGAGTCAGATTACAACCCCGGG...CACGGTGGTTCTTTTTCGTGAAAGGGAACGTACAAAGCTTAACAGTTTTCCCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR TCA 90 bp AGGTTTGGGTGTGGTGGTGTTTCCTGTGGACACGTTAAGATGGAACCTGAGGTGAATTCATCTAAATGGTaGGGCCCCAAAATAGACCAG +
Preference number: 4 (lower is better)
Translates to: RFGCGGVSCGHVKMEPEVNSSKW*GPKIDQ
Trigger: CTGGTCTATTTTGGGGCCTCACCATTTAGATGAATT...CACCTCAGGTTCCATCTTAACGTGTCCACAGGAAACACCACCACACCCAAACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000645528.2
CDS-3UTR TCA 90 bp ACTTACTTACTTACCAGAGGGTGGTTCAAGTCAAACAAACAAAACCAAAGACAGCTGGTCCAGGGCCTCTaGCTGCTCCACTTGGATCAG +
Preference number: 4 (lower is better)
Translates to: TYLLTRGWFKSNKQNQRQLVQGL*LLHLDQ
Trigger: CTGATCCAAGTGGAGCAGTCAGAGGCCCTGGACCAG...CTGTCTTTGGTTTTGTTTGTTTGACTTGAACCACCCTCTGGTAAGTAAGTAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR TCA 90 bp TATTTCAGAACAGCTAAACAGGAACCAGGACGCAGTGTATTTGGGGGAAAGGGTGGGGCTACAAGGTGGTaGTGCATATCATTTCATCCG +
Preference number: 4 (lower is better)
Translates to: YFRTAKQEPGRSVFGGKGGATRW*CISFHP
Trigger: CGGATGAAATGATATGCATCACCACCTTGTAGCCCC...ACCCTTTCCCCCAAATACACTGCGTCCTGGTTCCTGTTTAGCTGTTCTGAAATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR TCA 90 bp CTTAAGCAGCACCACCAGTCCCCAGAGGACAAGAGCAGCTATATCTCATCCACCGGTTTATGGCTTTCTTaGGGCATGACATCTCTTATA +
Preference number: 4 (lower is better)
Translates to: LKQHHQSPEDKSSYISSTGLWLS*GMTSLI
Trigger: TATAAGAGATGTCATGCCTCAAGAAAGCCATAAACC...GGTGGATGAGATATAGCTGCTCTTGTCCTCTGGGGACTGGTGGTGCTGCTTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR TCA 90 bp AACAAACTAGTGTATCTAAGTTTACCTGGTTGCGAGTGCATTATTATTCCAGTTCTCACCCATCCTCTGTaGGAGGGCGGGGCCTGCTGT +
Preference number: 4 (lower is better)
Translates to: NKLVYLSLPGCECIIIPVLTHPL*EGGACC
Trigger: ACAGCAGGCCCCGCCCTCTCACAGAGGATGGGTGAG...AACTGGAATAATAATGCACTCGCAACCAGGTAAACTTAGATACACTAGTTTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR TCA 90 bp AGACAGTTGCAACCCATGGTGGATCCAAAGGTACAGTATCAAAATCATGGAACTGCTCTCACTGGCAAATaGCAGCTCTGTGCAAGGAGC +
Preference number: 4 (lower is better)
Translates to: RQLQPMVDPKVQYQNHGTALTGK*QLCARS
Trigger: GCTCCTTGCACAGAGCTGTCATTTGCCAGTGAGAGC...AGTTCCATGATTTTGATACTGTACCTTTGGATCCACCATGGGTTGCAACTGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR TCA 90 bp TTCTTAAGCAGCACCACCAGTCCCCAGAGGACAAGAGCAGCTATATCTCATCCATATTCGATGAGAGGTTaGACCAGGCTTAAAGCAGAC +
Preference number: 4 (lower is better)
Translates to: FLSSTTSPQRTRAAISHPYSMRG*TRLKAD
Trigger: GTCTGCTTTAAGCCTGGTTCAACCTCTCATCGAATA...TGGATGAGATATAGCTGCTCTTGTCCTCTGGGGACTGGTGGTGCTGCTTAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR TCA 90 bp GTGTTTCCTGTGGACACGTTAAGATGGAACCTGAGGTGTTGCCTGGATTGGTTTGATTTTGAGATGGCTTaGCAGAGACTTCCACAGCAG +
Preference number: 4 (lower is better)
Translates to: VFPVDTLRWNLRCCLDWFDFEMA*QRLPQQ
Trigger: CTGCTGTGGAAGTCTCTGTCAAGCCATCTCAAAATC...AAACCAATCCAGGCAACACCTCAGGTTCCATCTTAACGTGTCCACAGGAAACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636938.1
CDS-3UTR TCA 90 bp TTTCAAGGCCTTAGCCACAAACGCCTTCCGACTAACCAGCTTGGTGCCGTAGCTGCACTATGGCTACTTTaGATGTTGATCTTAAAACCC +
Preference number: 4 (lower is better)
Translates to: FQGLSHKRLPTNQLGAVAALWLL*MLILKP
Trigger: GGGTTTTAAGATCAACATTCAAAGTAGCCATAGTGC...AGCTACGGCACCAAGCTGGTTAGTCGGAAGGCGTTTGTGGCTAAGGCCTTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636938.1
CDS-3UTR GCA 90 bp CAGGACTTTGGAATGGAGTCAGATACCCACCTTAGGCAGGTCTGCTTAATCTTTGCATCGATTGCAGCTTaGCAAGACAGGACAGTTTGC +
Preference number: 4 (lower is better)
Translates to: QDFGMESDTHLRQVCLIFASIAA*QDRTVC
Trigger: GCAAACTGTCCTGTCTTGGCAAGCTGCAATCGATGC...AAAGATTAAGCAGACCTGCCTAAGGTGGGTATCTGACTCCATTCCAAAGTCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR GCA 90 bp GCTGTTTCAGTAGAAATAAGCCCACTTGAGACTTTTCCCTTTCAAGGCCTTAGCCACTCCTACATTCCGTaGCATTGGCAGTACACTGGC +
Preference number: 4 (lower is better)
Translates to: AVSVEISPLETFPFQGLSHSYIP*HWQYTG
Trigger: GCCAGTGTACTGCCAATGGCACGGAATGTAGGAGTG...GCTAAGGCCTTGAAAGGGAAAAGTCTCAAGTGGGCTTATTTCTACTGAAACAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR GCA 90 bp ACTGGCGTCACATCACAGAAAACCTTATTTATGAGGTCCCATTGCCCTCGCAATTCTCCGCAAGGGACGTaGTTTCAAGGCGTATTCAAC +
Preference number: 4 (lower is better)
Translates to: TGVTSQKTLFMRSHCPRNSPQGT*FQGVFN
Trigger: GTTGAATACGCCTTGAAAGCACGTCCCTTGCGGAGA...ATTGCGAGGGCAATGGGACCTCATAAATAAGGTTTTCTGTGATGTGACGCCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR GCA 90 bp CACCCCCAAAATAATCACACCAAATGGCCAAAGGGCTTTCTTTATCAGTTGGCCTCTCCGCAAGGGACGTaGTTTCAAGGCGTATTCAAC +
Preference number: 4 (lower is better)
Translates to: HPQNNHTKWPKGFLYQLASPQGT*FQGVFN
Trigger: GTTGAATACGCCTTGAAAGCACGTCCCTTGCGGAGA...GGCCAACTGATAAAGAAAGCCCTTTGGCCATTTGGTGTGATTATTTTGGGGGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636627.1
CDS-3UTR GCA 90 bp CAGGACTTTGGAATGGAGTCAGATACCCACCTTAGGCAGGTCTGCTTAATCTTTTCTCCGCAAGGGACGTaGTTTCAAGGCGTATTCAAC +
Preference number: 4 (lower is better)
Translates to: QDFGMESDTHLRQVCLIFSPQGT*FQGVFN
Trigger: GTTGAATACGCCTTGAAAGCACGTCCCTTGCGGAGA...AAAGATTAAGCAGACCTGCCTAAGGTGGGTATCTGACTCCATTCCAAAGTCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR GCA 90 bp TTTCAAGGCCTTAGCCACAAACGCCTTCCGACTAACCAGCTTGGTGCCGTAGCTCCCCTTAGGCTTAAATaGGATGACTTTCAAAACCAT +
Preference number: 4 (lower is better)
Translates to: FQGLSHKRLPTNQLGAVAPLRLK*DDFQNH
Trigger: ATGGTTTTGAAAGTCATCGCATTTAAGCCTAAGGGG...AGCTACGGCACCAAGCTGGTTAGTCGGAAGGCGTTTGTGGCTAAGGCCTTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000638120.1
CDS-3UTR GCA 90 bp AAACCGACCATCGGAGTGATATTCTCTTATGTAAACTGGCGTCACATCACAGAAACTTTCAGTTGGGTCTaGTTCGCTGAGGGCCACGTC +
Preference number: 4 (lower is better)
Translates to: KPTIGVIFSYVNWRHITETFSWV*FAEGHV
Trigger: GACGTGGCCCTCAGCGAAGCAGACCCAACTGAAAGT...TTCTGTGATGTGACGCCAGTTTACATAAGAGAATATCACTCCGATGGTCGGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR GCA 90 bp CACCAAATGGCCAAAGGGCTTTCTTTATCAGTTGGCCTTAATGCTCTAAATGATCCAGGCCTCACCTGTTaGACACCTGAAGAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: HQMAKGLSLSVGLNALNDPGLTC*TPEEQQ
Trigger: CTGCTGCTCTTCAGGTGTGCAACAGGTGAGGCCTGG...ATCATTTAGAGCATTAAGGCCAACTGATAAAGAAAGCCCTTTGGCCATTTGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636627.1
CDS-3UTR GCA 90 bp CCAAGGGGCAGAGCAGCCAGCTGGACCTGCTCTGTAATTCACTTACTTACTTACAGACAATGGCAAAGTTaGTCCCACATGTATACTCCT +
Preference number: 4 (lower is better)
Translates to: PRGRAASWTCSVIHLLTYRQWQS*SHMYTP
Trigger: AGGAGTATACATGTGGGAGCAACTTTGCCATTGTCT...GTAAGTAAGTAAGTGAATTACAGAGCAGGTCCAGCTGGCTGCTCTGCCCCTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR GCA 90 bp CACTCTCTGGACTTTCTGGAGACACTAGCATTAAAACCAAAGCACTGGCCAAGGAGTTCTTCATTAGCTTaGTCCAGGTTCCCTTCGGTC +
Preference number: 4 (lower is better)
Translates to: HSLDFLETLALKPKHWPRSSSLA*SRFPSV
Trigger: GACCGAAGGGAACCTGGAGCAAGCTAATGAAGAACT...CCTTGGCCAGTGCTTTGGTTTTAATGCTAGTGTCTCCAGAAAGTCCAGAGAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636627.1
CDS-3UTR GCA 90 bp GTGTTTCCTGTGGACACGTTAAGATGGAACCTGAGGTGTTGCCTGGATTGGTTTAGTTCTTCATTAGCTTaGTCCAGGTTCCCTTCGGTC +
Preference number: 4 (lower is better)
Translates to: VFPVDTLRWNLRCCLDWFSSSLA*SRFPSV
Trigger: GACCGAAGGGAACCTGGAGCAAGCTAATGAAGAACT...AAACCAATCCAGGCAACACCTCAGGTTCCATCTTAACGTGTCCACAGGAAACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR GCA 90 bp ACTGACTTTGGAAAAGATCATCGCCTCTATCAGACACTTAGGGTCCTGGTCTGGACACACCGAATTTCCTaGTGGAGGAAACAGCGGTTT +
Preference number: 4 (lower is better)
Translates to: TDFGKDHRLYQTLRVLVWTHRIS*WRKQRF
Trigger: AAACCGCTGTTTCCTCCAGCAGGAAATTCGGTGTGT...CCAGACCAGGACCCTAAGTGTCTGATAGAGGCGATGATCTTTTCCAAAGTCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR GCA 90 bp CGTATTTCAGAACAGCTAAACAGGAACCAGGACGCAGTGTATTTGGGGGAAAGGCAGAGTCGATGTTTCTaGCTGGGTATCTGCTGTAGT +
Preference number: 4 (lower is better)
Translates to: RISEQLNRNQDAVYLGERQSRCF*LGICCS
Trigger: ACTACAGCAGATACCCAGGCAGAAACATCGACTCTG...CCTTTCCCCCAAATACACTGCGTCCTGGTTCCTGTTTAGCTGTTCTGAAATACG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR GCA 90 bp ACTGACTTTGGAAAAGATCATCGCCTCTATCAGACACTTAGGGTCCTGGTCTGGACTGCCATGATCTGTTaGTGCATTAGATGCAGAGGC +
Preference number: 4 (lower is better)
Translates to: TDFGKDHRLYQTLRVLVWTAMIC*CIRCRG
Trigger: GCCTCTGCATCTAATGCAGCAACAGATCATGGCAGT...CCAGACCAGGACCCTAAGTGTCTGATAGAGGCGATGATCTTTTCCAAAGTCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR GCA 90 bp GACTTACTTACACACCGTATTTCAGAACAGCTAAACAGGAACCAGGACGCAGTGCTGTCCGCACTCCTCTaGTTGTCGCTGTTTTTGTTC +
Preference number: 4 (lower is better)
Translates to: DLLTHRISEQLNRNQDAVLSALL*LSLFLF
Trigger: GAACAAAAACAGCGACAAGCAGAGGAGTGCGGACAG...CACTGCGTCCTGGTTCCTGTTTAGCTGTTCTGAAATACGGTGTGTAAGTAAGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR GCA 90 bp AGACAGTTGCAACCCATGGTGGATCCAAAGGTACAGTATCAAAATCATGGAACTAAGCAGGGTGCTGGCTaGACTCTCCATCTCGTCGAT +
Preference number: 4 (lower is better)
Translates to: RQLQPMVDPKVQYQNHGTKQGAG*TLHLVD
Trigger: ATCGACGAGATGGAGAGTGCAGCCAGCACCCTGCTT...AGTTCCATGATTTTGATACTGTACCTTTGGATCCACCATGGGTTGCAACTGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR GCA 90 bp AGAATCCTTGGGGATGATGGTAGCCTCGGGGCCTCTCAGAGTCGATGTTTCTGCCTAAGTTTACCTGGTTaGGAGTGCATTATTATTCCA +
Preference number: 4 (lower is better)
Translates to: RILGDDGSLGASQSRCFCLSLPG*ECIIIP
Trigger: TGGAATAATAATGCACTCGCAACCAGGTAAACTTAG...GCAGAAACATCGACTCTGAGAGGCCCCGAGGCTACCATCATCCCCAAGGATTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636448.1
CDS-3UTR GCA 90 bp GTCACATCACAGAAAACCTTATTTATGAGGTCCCATTGCCCTCGCAATAATCACCTCTTCAGAGTTGTCTaGTTCGCTGAGGGCCACGTC +
Preference number: 4 (lower is better)
Translates to: VTSQKTLFMRSHCPRNNHLFRVV*FAEGHV
Trigger: GACGTGGCCCTCAGCGAAGCAGACAACTCTGAAGAG...GTGATTATTGCGAGGGCAATGGGACCTCATAAATAAGGTTTTCTGTGATGTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422281.7
CDS-3UTR GCA 90 bp TACGTTCAAAGTGCTTTACAATCACTTAGCTATTCCTCACAACAGCCCTGTGAGCACCTTCCGGAGGAGTaGTTTGCTTGGAAGGGGTCT +
Preference number: 4 (lower is better)
Translates to: YVQSALQSLSYSSQQPCEHLPEE*FAWKGS
Trigger: AGACCCCTTCCAAGCAAAGCACTCCTCCGGAAGGTG...CTCACAGGGCTGTTGTGAGGAATAGCTAAGTGATTGTAAAGCACTTTGAACGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000645528.2
CDS-3UTR CCA 90 bp TATTTCAGAACAGCTAAACAGGAACCAGGACGCAGTGTATTTGGGGGAAAGGGTGATTTGCCGCTTGAGTaGTTCCCGCCTTCTGTTTCT +
Preference number: 4 (lower is better)
Translates to: YFRTAKQEPGRSVFGGKGDLPLE*FPPSVS
Trigger: AGAAACAGAAGGCGGGAACCACTCAAGCGGCAAATC...ACCCTTTCCCCCAAATACACTGCGTCCTGGTTCCTGTTTAGCTGTTCTGAAATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CCA 90 bp TTTCAAGGCCTTAGCCACAAACGCCTTCCGACTAACCAGCTTGGTGCCGTAGCTAGTGCTCAGAGGAAATaGTTAAGGTGTTCAGAAACA +
Preference number: 4 (lower is better)
Translates to: FQGLSHKRLPTNQLGAVASAQRK*LRCSET
Trigger: TGTTTCTGAACACCTTAACCATTTCCTCTGAGCACT...AGCTACGGCACCAAGCTGGTTAGTCGGAAGGCGTTTGTGGCTAAGGCCTTGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR CCA 90 bp CCAAGGGGCAGAGCAGCCAGCTGGACCTGCTCTGTAATTCACTTACTTACTTACCAAAGGTGCTCCGCTTaGTTTGCGTTTCATCAAAAT +
Preference number: 4 (lower is better)
Translates to: PRGRAASWTCSVIHLLTYQRCSA*FAFHQN
Trigger: ATTTTGATGAAACGCAAACCAAGCGGAGCACCTTTG...GTAAGTAAGTAAGTGAATTACAGAGCAGGTCCAGCTGGCTGCTCTGCCCCTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR CCA 90 bp ATACCCAAGGGGCAGAGCAGCCAGCTGGACCTGCTCTGTAATTCACTTACTTACCAAAGGTGCTCCGCTTaGTTTGCGTTTCATCAAAAT +
Preference number: 4 (lower is better)
Translates to: IPKGQSSQLDLLCNSLTYQRCSA*FAFHQN
Trigger: ATTTTGATGAAACGCAAACCAAGCGGAGCACCTTTG...GTAAGTAAGTGAATTACAGAGCAGGTCCAGCTGGCTGCTCTGCCCCTTGGGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR CCA 90 bp GTGTATCTGAGCTTCCTGGCCTGTCCACTTCTCACTGTATTCTGGACTGGGTCTCTAGGCTCTCTTTTCTaGCAATCTTTTTCCTCTCCT +
Preference number: 4 (lower is better)
Translates to: VYLSFLACPLLTVFWTGSLGSLF*QSFSSP
Trigger: AGGAGAGGAAAAAGATTGCCAGAAAAGAGAGCCTAG...AGACCCAGTCCAGAATACAGTGAGAAGTGGACAGGCCAGGAAGCTCAGATACAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR CCA 90 bp GTGTTTCCTGTGGACACGTTAAGATGGAACCTGAGGTGTTGCCTGGATTGGTTTTTGGTGAAGATGTGGTaGTTGATGAGCTTGTGGCAG +
Preference number: 4 (lower is better)
Translates to: VFPVDTLRWNLRCCLDWFLVKMW*LMSLWQ
Trigger: CTGCCACAAGCTCATCAACCACCACATCTTCACCAA...AAACCAATCCAGGCAACACCTCAGGTTCCATCTTAACGTGTCCACAGGAAACAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR CCA 90 bp CGTATTTCAGAACAGCTAAACAGGAACCAGGACGCAGTGTATTTGGGGGAAAGGAGGTTGGTGAAGATGTaGTGGTTGATGAGCTTGTGG +
Preference number: 4 (lower is better)
Translates to: RISEQLNRNQDAVYLGERRLVKM*WLMSLW
Trigger: CCACAAGCTCATCAACCACCACATCTTCACCAACCT...CCTTTCCCCCAAATACACTGCGTCCTGGTTCCTGTTTAGCTGTTCTGAAATACG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CCA 90 bp GTGTTTCCTGTGGACACGTTAAGATGGAACCTGAGGTGTTGCCTGGATTGGTTTCAGAAGGCCCCTTTGTaGAGGAAAGCTCCAAAAGTT +
Preference number: 4 (lower is better)
Translates to: VFPVDTLRWNLRCCLDWFQKAPL*RKAPKV
Trigger: AACTTTTGGAGCTTTCCTCCACAAAGGGGCCTTCTG...AAACCAATCCAGGCAACACCTCAGGTTCCATCTTAACGTGTCCACAGGAAACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CCA 90 bp TCCTGTGGACACGTTAAGATGGAACCTGAGGTGTTGCCTGGATTGGTTTTGGCATCTTCACAACGGAGATaGCACTGGATTGAATCCCAA +
Preference number: 4 (lower is better)
Translates to: SCGHVKMEPEVLPGLVLASSQRR*HWIESQ
Trigger: TTGGGATTCAATCCAGTGCCATCTCCGTTGTGAAGA...TGCCAAAACCAATCCAGGCAACACCTCAGGTTCCATCTTAACGTGTCCACAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CCA 90 bp TTTCCTGTGGACACGTTAAGATGGAACCTGAGGTGTTGCCTGGATTGGTTTTGGCTCCATTCGAGTCGATaGCTTTATACAGCAACGCAG +
Preference number: 4 (lower is better)
Translates to: FPVDTLRWNLRCCLDWFWLHSSR*LYTATQ
Trigger: CTGCGTTGCTGTATAAAGCCATCGACTCGAATGGAG...CCAAAACCAATCCAGGCAACACCTCAGGTTCCATCTTAACGTGTCCACAGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CCA 90 bp GACTTACTTACACACCGTATTTCAGAACAGCTAAACAGGAACCAGGACGCAGTGACTGGTAGGGGTTTTTaGGGATGTATCTCCGCAAGG +
Preference number: 4 (lower is better)
Translates to: DLLTHRISEQLNRNQDAVTGRGF*GCISAR
Trigger: CCTTGCGGAGATACATCCCCAAAAACCCCTACCAGT...CACTGCGTCCTGGTTCCTGTTTAGCTGTTCTGAAATACGGTGTGTAAGTAAGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CCA 90 bp GTCACATCACAGAAAACCTTATTTATGAGGTCCCATTGCCCTCGCAATAATCACGTCACAGAGCTTCCCTaGGAGACAGGCCAGCATGAT +
Preference number: 4 (lower is better)
Translates to: VTSQKTLFMRSHCPRNNHVTELP*ETGQHD
Trigger: ATCATGCTGGCCTGTCTCCCAGGGAAGCTCTGTGAC...GTGATTATTGCGAGGGCAATGGGACCTCATAAATAAGGTTTTCTGTGATGTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CCA 90 bp TTCTTAAGCAGCACCACCAGTCCCCAGAGGACAAGAGCAGCTATATCTCATCCAGCTGGAGGGACAACTTaGTCAAGTAATTTCATGCTG +
Preference number: 4 (lower is better)
Translates to: FLSSTTSPQRTRAAISHPAGGTT*SSNFML
Trigger: CAGCATGAAATTACTTGACCAAGTTGTCCCTCCAGC...TGGATGAGATATAGCTGCTCTTGTCCTCTGGGGACTGGTGGTGCTGCTTAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR CCA 90 bp GACTTACTTACACACCGTATTTCAGAACAGCTAAACAGGAACCAGGACGCAGTGCCTGTAGGGCAATTGTaGTGTTCTTCGCAGGGTACT +
Preference number: 4 (lower is better)
Translates to: DLLTHRISEQLNRNQDAVPVGQL*CSSQGT
Trigger: AGTACCCTGCGAAGAACACCACAATTGCCCTACAGG...CACTGCGTCCTGGTTCCTGTTTAGCTGTTCTGAAATACGGTGTGTAAGTAAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CCA 90 bp GACTTACTTACACACCGTATTTCAGAACAGCTAAACAGGAACCAGGACGCAGTGGTCGATGTTTCTGCCTaGGTATCTGCTGTAGTAGCC +
Preference number: 4 (lower is better)
Translates to: DLLTHRISEQLNRNQDAVVDVSA*VSAVVA
Trigger: GGCTACTACAGCAGATACCCAGGCAGAAACATCGAC...CACTGCGTCCTGGTTCCTGTTTAGCTGTTCTGAAATACGGTGTGTAAGTAAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CCA 90 bp TTCTTAAGCAGCACCACCAGTCCCCAGAGGACAAGAGCAGCTATATCTCATCCACTCGGTGAGTACTTCTaGGCTTTACTTGAATCTAGG +
Preference number: 4 (lower is better)
Translates to: FLSSTTSPQRTRAAISHPLGEYF*ALLESR
Trigger: CCTAGATTCAAGTAAAGCCCAGAAGTACTCACCGAG...TGGATGAGATATAGCTGCTCTTGTCCTCTGGGGACTGGTGGTGCTGCTTAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR CCA 90 bp CTTAAGCAGCACCACCAGTCCCCAGAGGACAAGAGCAGCTATATCTCATCCACCATAATCACTGGTAGCTaGGTTCTGACTTACTTACAC +
Preference number: 4 (lower is better)
Translates to: LKQHHQSPEDKSSYISSTIITGS*VLTYLH
Trigger: GTGTAAGTAAGTCAGAACCCAGCTACCAGTGATTAT...GGTGGATGAGATATAGCTGCTCTTGTCCTCTGGGGACTGGTGGTGCTGCTTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR CCA 90 bp TATCCAAAAGTGGGTTTTCATCAGGACGTACAGTCAGAGTGTGAGTGCATTCTAGGCAGAGCAGCCAGCTaGACCTGCTCTGTAATTCAC +
Preference number: 4 (lower is better)
Translates to: YPKVGFHQDVQSECECILGRAAS*TCSVIH
Trigger: GTGAATTACAGAGCAGGTCCAGCTGGCTGCTCTGCC...TAGAATGCACTCACACTCTGACTGTACGTCCTGATGAAAACCCACTTTTGGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR CCA 90 bp CGTATTTCAGAACAGCTAAACAGGAACCAGGACGCAGTGTATTTGGGGGAAAGGGTATTAGGTTACCATTaGCACCGAAGGAACCAGGAG +
Preference number: 4 (lower is better)
Translates to: RISEQLNRNQDAVYLGERVLGYH*HRRNQE
Trigger: CTCCTGGTTCCTTCGGTGCCAATGGTAACCTAATAC...CCTTTCCCCCAAATACACTGCGTCCTGGTTCCTGTTTAGCTGTTCTGAAATACG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR CCA 90 bp GACTTACTTACACACCGTATTTCAGAACAGCTAAACAGGAACCAGGACGCAGTGAGACACTTAGGGTCCTaGTCTGGCAATTTTGGCCTG +
Preference number: 4 (lower is better)
Translates to: DLLTHRISEQLNRNQDAVRHLGS*SGNFGL
Trigger: CAGGCCAAAATTGCCAGACCAGGACCCTAAGTGTCT...CACTGCGTCCTGGTTCCTGTTTAGCTGTTCTGAAATACGGTGTGTAAGTAAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR CCA 90 bp CAGACACTTAGGGTCCTGGTCTGGCAATTTTGGCCTGATGTGATGCCACAAGACGTTTGGATTTTGAGATaGCTTGACAGAGACTTCCAC +
Preference number: 4 (lower is better)
Translates to: QTLRVLVWQFWPDVMPQDVWILR*LDRDFH
Trigger: GTGGAAGTCTCTGTCAAGCCATCTCAAAATCCAAAC...GTCTTGTGGCATCACATCAGGCCAAAATTGCCAGACCAGGACCCTAAGTGTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000350061.11
CDS-3UTR CCA 90 bp GATGTGAAAATGCAACCTGCAGGGTTACCTCTGTTGACATCTTTGTGCATTGCCAGGTGTTGCCTGGATTaGTTTTGGCATGCGGGTGTA +
Preference number: 4 (lower is better)
Translates to: DVKMQPAGLPLLTSLCIARCCLD*FWHAGV
Trigger: TACACCCGCATGCCAAAACCAATCCAGGCAACACCT...GGCAATGCACAAAGATGTCAACAGAGGTAACCCTGCAGGTTGCATTTTCACATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636938.1
CDS-3UTR TCA 90 bp ATCATGGAACTCTTGCCCAAAGAAAAGACTGCAAATAGTCATCTGGTATATCTTCTGGCGTCCATTCCCTaGGAACGCACATGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: IMELLPKEKTANSHLVYLLASIP*ERTWSW
Trigger: CCAGCTCCATGTGCGTTCTCAGGGAATGGACGCCAG...AAGATATACCAGATGACTATTTGCAGTCTTTTCTTTGGGCAAGAGTTCCATGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR TCA 90 bp TCCTGTGGACACGTTAAGATGGAACCTGAGGTGTTGCCTGGATTGGTTTTGGCAGTTAAGGACGAAAAATaGGCCAAGGATGATCAGACT +
Preference number: 4 (lower is better)
Translates to: SCGHVKMEPEVLPGLVLAVKDEK*AKDDQT
Trigger: AGTCTGATCATCCTTGGCTCATTTTTCGTCCTTAAC...TGCCAAAACCAATCCAGGCAACACCTCAGGTTCCATCTTAACGTGTCCACAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR TCA 90 bp CACCAAATGGCCAAAGGGCTTTCTTTATCAGTTGGCCTTAATGCTCTAAATGATTCTCGCCTTCACCGCTaGCGTTCTCTGTGTTCACAG +
Preference number: 4 (lower is better)
Translates to: HQMAKGLSLSVGLNALNDSRLHR*RSLCSQ
Trigger: CTGTGAACACAGAGAACGTCAGCGGTGAAGGCGAGA...ATCATTTAGAGCATTAAGGCCAACTGATAAAGAAAGCCCTTTGGCCATTTGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636627.1
CDS-3UTR TCA 90 bp TTGCAAACACTCTCTGGACTTTCTGGAGACACTAGCATTAAAACCAAAGCACTGTACATCTTCTGCGATTaGATCGGTTCCAGCGACGCC +
Preference number: 4 (lower is better)
Translates to: LQTLSGLSGDTSIKTKALYIFCD*IGSSDA
Trigger: GGCGTCGCTGGAACCGATTCAATCGCAGAAGATGTA...CAGTGCTTTGGTTTTAATGCTAGTGTCTCCAGAAAGTCCAGAGAGTGTTTGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636627.1
CDS-3UTR TCA 90 bp AAGGGAAAACTGTTAAGCTTTGTACGTTCCCTTTCACGAAAAAGAACCACCGTGTACATCTTCTGCGATTaGATCGGTTCCAGCGACGCC +
Preference number: 4 (lower is better)
Translates to: KGKLLSFVRSLSRKRTTVYIFCD*IGSSDA
Trigger: GGCGTCGCTGGAACCGATTCAATCGCAGAAGATGTA...CACGGTGGTTCTTTTTCGTGAAAGGGAACGTACAAAGCTTAACAGTTTTCCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR TCA 90 bp GGTTCCCTGACTCCCAGTGTCCTTGAAACTAGACCACACTGCTTCCAAAGAGGCTTGTTGGCAATATCTTaGATCTGTGTCAACCAATCT +
Preference number: 4 (lower is better)
Translates to: GSLTPSVLETRPHCFQRGLLAIS*ICVNQS
Trigger: AGATTGGTTGACACAGATTCAAGATATTGCCAACAA...GCCTCTTTGGAAGCAGTGTGGTCTAGTTTCAAGGACACTGGGAGTCAGGGAACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636938.1
CDS-3UTR TCA 90 bp TTGGACCAAAATTGCTACCTATCATCTATCTTTTTGATTGCAGGGAATCCCTGCCCAGCATCTCGCAGGTaGACAGAGCCAAGAGGACTT +
Preference number: 4 (lower is better)
Translates to: LDQNCYLSSIFLIAGNPCPASRR*TEPRGL
Trigger: AAGTCCTCTTGGCTCTGTTCACCTGCGAGATGCTGG...GCAGGGATTCCCTGCAATCAAAAAGATAGATGATAGGTAGCAATTTTGGTCCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR TCA 90 bp CCTCTCCTTTGTCTGGAATGTTCTTCATATCACCCCCAAAATAATCACACCAAACCAGCATCTCGCAGGTaGACAGAGCCAAGAGGACTT +
Preference number: 4 (lower is better)
Translates to: PLLCLECSSYHPQNNHTKPASRR*TEPRGL
Trigger: AAGTCCTCTTGGCTCTGTTCACCTGCGAGATGCTGG...TTTGGTGTGATTATTTTGGGGGTGATATGAAGAACATTCCAGACAAAGGAGAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636627.1
CDS-3UTR TCA 90 bp GTGTCTTGGGCTCAGCATCAGATGTACAGACTCCAACCACCACTTGGAATCAGCAGCAATCAAACCGGTTaGAAAGAGAGACGAAATATG +
Preference number: 4 (lower is better)
Translates to: VSWAQHQMYRLQPPLGISSNQTG*KERRNM
Trigger: CATATTTCGTCTCTCTTTTCAACCGGTTTGATTGCT...GCTGATTCCAAGTGGTGGTTGGAGTCTGTACATCTGATGCTGAGCCCAAGACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636938.1
CDS-3UTR TCA 90 bp AAACCGACCATCGGAGTGATATTCTCTTATGTAAACTGGCGTCACATCACAGAATCCCCAGGGGAGACATaGTTTCCAGTTCCACCAAGA +
Preference number: 4 (lower is better)
Translates to: KPTIGVIFSYVNWRHITESPGET*FPVPPR
Trigger: TCTTGGTGGAACTGGAAATCATGTCTCCCCTGGGGA...TTCTGTGATGTGACGCCAGTTTACATAAGAGAATATCACTCCGATGGTCGGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR TCA 90 bp TGCAAACACTCTCTGGACTTTCTGGAGACACTAGCATTAAAACCAAAGCACTGGGGATTGAATCCCAAATaGCACCAGAGACACCCCAAC +
Preference number: 4 (lower is better)
Translates to: CKHSLDFLETLALKPKHWGLNPK*HQRHPN
Trigger: GTTGGGGTGTCTCTGGTGTCATTTGGGATTCAATCC...CCAGTGCTTTGGTTTTAATGCTAGTGTCTCCAGAAAGTCCAGAGAGTGTTTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000636627.1
CDS-3UTR TCA 90 bp GTTAAGCTTTGTACGTTCCCTTTCACGAAAAAGAACCACCGTGAGCAACGTCCGGGACGTTGTCGAAGTTaGAATCACTGTTTTGCCAGA +
Preference number: 4 (lower is better)
Translates to: VKLCTFPFTKKNHREQRPGRCRS*NHCFAR
Trigger: TCTGGCAAAACAGTGATTTCAACTTCGACAACGTCC...CGGACGTTGCTCACGGTGGTTCTTTTTCGTGAAAGGGAACGTACAAAGCTTAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR TCA 90 bp TTTCAAGGCCTTAGCCACAAACGCCTTCCGACTAACCAGCTTGGTGCCGTAGCTTTTTCTCCTTGTTCCTaGAATGTAACGATGACAAAG +
Preference number: 4 (lower is better)
Translates to: FQGLSHKRLPTNQLGAVAFSPCS*NVTMTK
Trigger: CTTTGTCATCGTTACATTTCAGGAACAAGGAGAAAA...AGCTACGGCACCAAGCTGGTTAGTCGGAAGGCGTTTGTGGCTAAGGCCTTGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000636938.1
ENST00000638120.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR TCA 90 bp TGCAACCCATGGTGGATCCAAAGGTACAGTATCAAAATCATGGAACTCTTGCCCTGTCCATGGCATCATTaGACATCTTGGACTGCTCGT +
Preference number: 4 (lower is better)
Translates to: CNPWWIQRYSIKIMELLPCPWHH*TSWTAR
Trigger: ACGAGCAGTCCAAGATGTTCAATGATGCCATGGACA...GGGCAAGAGTTCCATGATTTTGATACTGTACCTTTGGATCCACCATGGGTTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR TCA 90 bp AGGTTTGGGTGTGGTGGTGTTTCCTGTGGACACGTTAAGATGGAACCTGAGGTGAAAGACGGAAAAAGGTaGTGGAGATTCTATTGCTCT +
Preference number: 4 (lower is better)
Translates to: RFGCGGVSCGHVKMEPEVKDGKR*WRFYCS
Trigger: AGAGCAATAGAATCTCCATCACCTTTTTCCGTCTTT...CACCTCAGGTTCCATCTTAACGTGTCCACAGGAAACACCACCACACCCAAACCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000645528.2
CDS-3UTR TCA 90 bp CTTCATATCACCCCCAAAATAATCACACCAAATGGCCAAAGGGCTTTCTTTATCCCCGGGGTTGTAATCTaGCTCAGGGTCACAGAGCTT +
Preference number: 4 (lower is better)
Translates to: LHITPKIITPNGQRAFFIPGVVI*LRVTEL
Trigger: AAGCTCTGTGACCCTGAGTCAGATTACAACCCCGGG...GATAAAGAAAGCCCTTTGGCCATTTGGTGTGATTATTTTGGGGGTGATATGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000636627.1
CDS-3UTR TCA 90 bp ACTGGCGTCACATCACAGAAAACCTTATTTATGAGGTCCCATTGCCCTCGCAATTGCGTCGAAGCAGAGTaGCCACATCAAGGTGTTTTA +
Preference number: 4 (lower is better)
Translates to: TGVTSQKTLFMRSHCPRNCVEAE*PHQGVL
Trigger: TAAAACACCTTGATGTGGTCACTCTGCTTCGACGCA...ATTGCGAGGGCAATGGGACCTCATAAATAAGGTTTTCTGTGATGTGACGCCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR TCA 90 bp CCAAGGGGCAGAGCAGCCAGCTGGACCTGCTCTGTAATTCACTTACTTACTTACGGGCACCATTTCTTTTaGACACATCATCTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: PRGRAASWTCSVIHLLTYGHHFF*THHLLL
Trigger: AAGAAGAAGATGATGTGTTCAAAAGAAATGGTGCCC...GTAAGTAAGTAAGTGAATTACAGAGCAGGTCCAGCTGGCTGCTCTGCCCCTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR TCA 90 bp CGTATTTCAGAACAGCTAAACAGGAACCAGGACGCAGTGTATTTGGGGGAAAGGTGCTTGTGGGAAGAATaGTGCCCATTTTCAGACACA +
Preference number: 4 (lower is better)
Translates to: RISEQLNRNQDAVYLGERCLWEE*CPFSDT
Trigger: TGTGTCTGAAAATGGGCATCATTCTTCCCACAAGCA...CCTTTCCCCCAAATACACTGCGTCCTGGTTCCTGTTTAGCTGTTCTGAAATACG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR TCA 90 bp TATTTCAGAACAGCTAAACAGGAACCAGGACGCAGTGTATTTGGGGGAAAGGGTGAGCTGTTCATCTCCTaGGTCGGACCTAATGTAAGT +
Preference number: 4 (lower is better)
Translates to: YFRTAKQEPGRSVFGGKGELFIS*VGPNVS
Trigger: ACTTACATTAGGTCCGACTCAGGAGATGAACAGCTC...ACCCTTTCCCCCAAATACACTGCGTCCTGGTTCCTGTTTAGCTGTTCTGAAATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR TCA 90 bp GTCACATCACAGAAAACCTTATTTATGAGGTCCCATTGCCCTCGCAATAATCACAGCAGTGGGGGTCCCTaGAATAGCCATGTATCTCTG +
Preference number: 4 (lower is better)
Translates to: VTSQKTLFMRSHCPRNNHSSGGP*NSHVSL
Trigger: CAGAGATACATGGCTATTTCAGGGACCCCCACTGCT...GTGATTATTGCGAGGGCAATGGGACCTCATAAATAAGGTTTTCTGTGATGTGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR TCA 90 bp TTCTTAAGCAGCACCACCAGTCCCCAGAGGACAAGAGCAGCTATATCTCATCCATTCGTGTTTTGTTGCTaGCACAAATTTTGGGTCCCT +
Preference number: 4 (lower is better)
Translates to: FLSSTTSPQRTRAAISHPFVFCC*HKFWVP
Trigger: AGGGACCCAAAATTTGTGTCAGCAACAAAACACGAA...TGGATGAGATATAGCTGCTCTTGTCCTCTGGGGACTGGTGGTGCTGCTTAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR TCA 90 bp TATTTCAGAACAGCTAAACAGGAACCAGGACGCAGTGTATTTGGGGGAAAGGGTCTGGTAGCTGGGTTCTaGCTTACTTACACACCGTAT +
Preference number: 4 (lower is better)
Translates to: YFRTAKQEPGRSVFGGKGLVAGF*LTYTPY
Trigger: ATACGGTGTGTAAGTAAGTCAGAACCCAGCTACCAG...ACCCTTTCCCCCAAATACACTGCGTCCTGGTTCCTGTTTAGCTGTTCTGAAATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR TCA 90 bp TCTAATTATCCAAAAGTGGGTTTTCATCAGGACGTACAGTCAGAGTGTGAGTGCCAGTTGCCCTTAGCGTaGCAGTCAGAAACCGACCAT +
Preference number: 4 (lower is better)
Translates to: SNYPKVGFHQDVQSECECQLPLA*QSETDH
Trigger: ATGGTCGGTTTCTGACTGTCACGCTAAGGGCAACTG...GCACTCACACTCTGACTGTACGTCCTGATGAAAACCCACTTTTGGATAATTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR TCA 90 bp AGCCACAAACGCCTTCCGACTAACCAGCTTGGTGCCGTAGCTCAGGCAGAAAATTTCCTGCATTTCTTCTaGAATGCTGTTTCAGTAGAA +
Preference number: 4 (lower is better)
Translates to: SHKRLPTNQLGAVAQAENFLHFF*NAVSVE
Trigger: TTCTACTGAAACAGCATTTCAGAAGAAATGCAGGAA...ATTTTCTGCCTGAGCTACGGCACCAAGCTGGTTAGTCGGAAGGCGTTTGTGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000636938.1
ENST00000638120.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR TCA 90 bp GTTCTTCATATCACCCCCAAAATAATCACACCAAATGGCCAAAGGGCTTTCTTTGGAAATAGACTGCACTaGCCACCAGCTGGAGGGACA +
Preference number: 4 (lower is better)
Translates to: VLHITPKIITPNGQRAFFGNRLH*PPAGGT
Trigger: TGTCCCTCCAGCTGGTGGTCAGTGCAGTCTATTTCC...AAAGAAAGCCCTTTGGCCATTTGGTGTGATTATTTTGGGGGTGATATGAAGAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636627.1
CDS-3UTR GCA 90 bp GTGTTTCCTGTGGACACGTTAAGATGGAACCTGAGGTGTTGCCTGGATTGGTTTAAAGAGGAAGTCTGGTaGCTCTTGCATAGTTTGCCT +
Preference number: 4 (lower is better)
Translates to: VFPVDTLRWNLRCCLDWFKEEVW*LLHSLP
Trigger: AGGCAAACTATGCAAGAGGCACCAGACTTCCTCTTT...AAACCAATCCAGGCAACACCTCAGGTTCCATCTTAACGTGTCCACAGGAAACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR GCA 90 bp GTCACATCACAGAAAACCTTATTTATGAGGTCCCATTGCCCTCGCAATAATCACTCCTACAGGTGGGGGTaGAGAGGTGCTCATAGTTTG +
Preference number: 4 (lower is better)
Translates to: VTSQKTLFMRSHCPRNNHSYRWG*RGAHSL
Trigger: CAAACTATGAGCACCTCTGCACCCCCACCTGTAGGA...GTGATTATTGCGAGGGCAATGGGACCTCATAAATAAGGTTTTCTGTGATGTGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR GCA 90 bp CAGGACTTTGGAATGGAGTCAGATACCCACCTTAGGCAGGTCTGCTTAATCTTTCTGGAAATCTCCCCGTaGTTTTGCCTTCTCTCTTTC +
Preference number: 4 (lower is better)
Translates to: QDFGMESDTHLRQVCLIFLEISP*FCLLSF
Trigger: GAAAGAGAGAAGGCAAAAGCACGGGGAGATTTCCAG...AAAGATTAAGCAGACCTGCCTAAGGTGGGTATCTGACTCCATTCCAAAGTCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR GCA 90 bp CGTATTTCAGAACAGCTAAACAGGAACCAGGACGCAGTGTATTTGGGGGAAAGGGGAAATTGTCAAAGGTaGTCCGCTTGGTTTGCGTTT +
Preference number: 4 (lower is better)
Translates to: RISEQLNRNQDAVYLGERGNCQR*SAWFAF
Trigger: AAACGCAAACCAAGCGGAGCACCTTTGACAATTTCC...CCTTTCCCCCAAATACACTGCGTCCTGGTTCCTGTTTAGCTGTTCTGAAATACG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR GCA 90 bp TTTCCTGTGGACACGTTAAGATGGAACCTGAGGTGTTGCCTGGATTGGTTTTGGGGAAATTGTCAAAGGTaGTCCGCTTGGTTTGCGTTT +
Preference number: 4 (lower is better)
Translates to: FPVDTLRWNLRCCLDWFWGNCQR*SAWFAF
Trigger: AAACGCAAACCAAGCGGAGCACCTTTGACAATTTCC...CCAAAACCAATCCAGGCAACACCTCAGGTTCCATCTTAACGTGTCCACAGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR GCA 90 bp CGTATTTCAGAACAGCTAAACAGGAACCAGGACGCAGTGTATTTGGGGGAAAGGTTGAAATCACTGTTTTaGCAGATCCGTTCACGGACC +
Preference number: 4 (lower is better)
Translates to: RISEQLNRNQDAVYLGERLKSLF*QIRSRT
Trigger: GGTCCGTGAACGGATCTGGCAAAACAGTGATTTCAA...CCTTTCCCCCAAATACACTGCGTCCTGGTTCCTGTTTAGCTGTTCTGAAATACG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR GCA 90 bp GTGTTTCCTGTGGACACGTTAAGATGGAACCTGAGGTGTTGCCTGGATTGGTTTTTGAAATCACTGTTTTaGCAGATCCGTTCACGGACC +
Preference number: 4 (lower is better)
Translates to: VFPVDTLRWNLRCCLDWFLKSLF*QIRSRT
Trigger: GGTCCGTGAACGGATCTGGCAAAACAGTGATTTCAA...AAACCAATCCAGGCAACACCTCAGGTTCCATCTTAACGTGTCCACAGGAAACAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR GCA 90 bp GTTTCAGTAGAAATAAGCCCACTTGAGACTTTTCCCTTTCAAGGCCTTAGCCACTCTCCGCAAGGGACGTaGTTTCAAGGCGTATTCAAC +
Preference number: 4 (lower is better)
Translates to: VSVEISPLETFPFQGLSHSPQGT*FQGVFN
Trigger: GTTGAATACGCCTTGAAAGCACGTCCCTTGCGGAGA...GTGGCTAAGGCCTTGAAAGGGAAAAGTCTCAAGTGGGCTTATTTCTACTGAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000636938.1
ENST00000638120.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR GCA 90 bp GCTGTTTCAGTAGAAATAAGCCCACTTGAGACTTTTCCCTTTCAAGGCCTTAGCTCTCCGCAAGGGACGTaGTTTCAAGGCGTATTCAAC +
Preference number: 4 (lower is better)
Translates to: AVSVEISPLETFPFQGLSSPQGT*FQGVFN
Trigger: GTTGAATACGCCTTGAAAGCACGTCCCTTGCGGAGA...GCTAAGGCCTTGAAAGGGAAAAGTCTCAAGTGGGCTTATTTCTACTGAAACAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000636938.1
ENST00000638120.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR GCA 90 bp TTCTTAAGCAGCACCACCAGTCCCCAGAGGACAAGAGCAGCTATATCTCATCCAAGACAATGGCAAAGTTaGTCCCACATGTATACTCCT +
Preference number: 4 (lower is better)
Translates to: FLSSTTSPQRTRAAISHPRQWQS*SHMYTP
Trigger: AGGAGTATACATGTGGGAGCAACTTTGCCATTGTCT...TGGATGAGATATAGCTGCTCTTGTCCTCTGGGGACTGGTGGTGCTGCTTAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR GCA 90 bp ACTGGCGTCACATCACAGAAAACCTTATTTATGAGGTCCCATTGCCCTCGCAATAGTTCTTCATTAGCTTaGTCCAGGTTCCCTTCGGTC +
Preference number: 4 (lower is better)
Translates to: TGVTSQKTLFMRSHCPRNSSSLA*SRFPSV
Trigger: GACCGAAGGGAACCTGGAGCAAGCTAATGAAGAACT...ATTGCGAGGGCAATGGGACCTCATAAATAAGGTTTTCTGTGATGTGACGCCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR GCA 90 bp TATTTCAGAACAGCTAAACAGGAACCAGGACGCAGTGTATTTGGGGGAAAGGGTCAGAGTCGATGTTTCTaGCTGGGTATCTGCTGTAGT +
Preference number: 4 (lower is better)
Translates to: YFRTAKQEPGRSVFGGKGQSRCF*LGICCS
Trigger: ACTACAGCAGATACCCAGGCAGAAACATCGACTCTG...ACCCTTTCCCCCAAATACACTGCGTCCTGGTTCCTGTTTAGCTGTTCTGAAATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR GCA 90 bp AGTGGGGAACTACAATTATTAGGACCCATGGATATTGCTGCAGTTCAAATACAACAGACTCCACAGCAGTaGCCATCTGGACAATGGGGC +
Preference number: 4 (lower is better)
Translates to: SGELQLLGPMDIAAVQIQQTPQQ*PSGQWG
Trigger: GCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTG...TTGTATTTGAACTGCAGCAATATCCATGGGTCCTAATAATTGTAGTTCCCCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR GCA 90 bp CGTATTTCAGAACAGCTAAACAGGAACCAGGACGCAGTGTATTTGGGGGAAAGGTTTATGAGGTCCCATTaGCCTCGCAATAATCACTGG +
Preference number: 4 (lower is better)
Translates to: RISEQLNRNQDAVYLGERFMRSH*PRNNHW
Trigger: CCAGTGATTATTGCGAGGGCAATGGGACCTCATAAA...CCTTTCCCCCAAATACACTGCGTCCTGGTTCCTGTTTAGCTGTTCTGAAATACG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR GCA 90 bp ACTGACTTTGGAAAAGATCATCGCCTCTATCAGACACTTAGGGTCCTGGTCTGGTATCTCATCCACCTATaGATTTCTGCACCAGCGATG +
Preference number: 4 (lower is better)
Translates to: TDFGKDHRLYQTLRVLVWYLIHL*ISAPAM
Trigger: CATCGCTGGTGCAGAAATGCATAGGTGGATGAGATA...CCAGACCAGGACCCTAAGTGTCTGATAGAGGCGATGATCTTTTCCAAAGTCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR GCA 90 bp CAGGACTTTGGAATGGAGTCAGATACCCACCTTAGGCAGGTCTGCTTAATCTTTTGGAACCTGAGGTGTTaGCTGGATTGGTTTTGGCAT +
Preference number: 4 (lower is better)
Translates to: QDFGMESDTHLRQVCLIFWNLRC*LDWFWH
Trigger: ATGCCAAAACCAATCCAGGCAACACCTCAGGTTCCA...AAAGATTAAGCAGACCTGCCTAAGGTGGGTATCTGACTCCATTCCAAAGTCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CCA 90 bp TTTCCTGTGGACACGTTAAGATGGAACCTGAGGTGTTGCCTGGATTGGTTTTGGCAGAAAGAGGAAGTCTaGTGCCTCTTGCATAGTTTG +
Preference number: 4 (lower is better)
Translates to: FPVDTLRWNLRCCLDWFWQKEEV*CLLHSL
Trigger: CAAACTATGCAAGAGGCACCAGACTTCCTCTTTCTG...CCAAAACCAATCCAGGCAACACCTCAGGTTCCATCTTAACGTGTCCACAGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR CCA 90 bp CAGGACTTTGGAATGGAGTCAGATACCCACCTTAGGCAGGTCTGCTTAATCTTTGGACAACTTGTAAACTaGGCACTCCTGACACTAGTC +
Preference number: 4 (lower is better)
Translates to: QDFGMESDTHLRQVCLIFGQLVN*ALLTLV
Trigger: GACTAGTGTCAGGAGTGCCCAGTTTACAAGTTGTCC...AAAGATTAAGCAGACCTGCCTAAGGTGGGTATCTGACTCCATTCCAAAGTCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR CCA 90 bp CACTCTCTGGACTTTCTGGAGACACTAGCATTAAAACCAAAGCACTGGCCAAGGAACAAAATACACCCATaGCCATTCCCATCCTATCGC +
Preference number: 4 (lower is better)
Translates to: HSLDFLETLALKPKHWPRNKIHP*PFPSYR
Trigger: GCGATAGGATGGGAATGGCCATGGGTGTATTTTGTT...CCTTGGCCAGTGCTTTGGTTTTAATGCTAGTGTCTCCAGAAAGTCCAGAGAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636627.1
CDS-3UTR CCA 90 bp CACCAAATGGCCAAAGGGCTTTCTTTATCAGTTGGCCTTAATGCTCTAAATGATGCCACGAAGACGCACTaGACCACGTGCTTAAGTCCT +
Preference number: 4 (lower is better)
Translates to: HQMAKGLSLSVGLNALNDATKTH*TTCLSP
Trigger: AGGACTTAAGCACGTGGTCCAGTGCGTCTTCGTGGC...ATCATTTAGAGCATTAAGGCCAACTGATAAAGAAAGCCCTTTGGCCATTTGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636627.1
CDS-3UTR CCA 90 bp TGCAAACACTCTCTGGACTTTCTGGAGACACTAGCATTAAAACCAAAGCACTGGTTCCCCTTGAACAACTaGACCCCGATACAGGCAAAC +
Preference number: 4 (lower is better)
Translates to: CKHSLDFLETLALKPKHWFPLNN*TPIQAN
Trigger: GTTTGCCTGTATCGGGGTCCAGTTGTTCAAGGGGAA...CCAGTGCTTTGGTTTTAATGCTAGTGTCTCCAGAAAGTCCAGAGAGTGTTTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000636627.1
CDS-3UTR CCA 90 bp TATTTCAGAACAGCTAAACAGGAACCAGGACGCAGTGTATTTGGGGGAAAGGGTCTCCATTCGAGTCGATaGCTTTATACAGCAACGCAG +
Preference number: 4 (lower is better)
Translates to: YFRTAKQEPGRSVFGGKGLHSSR*LYTATQ
Trigger: CTGCGTTGCTGTATAAAGCCATCGACTCGAATGGAG...ACCCTTTCCCCCAAATACACTGCGTCCTGGTTCCTGTTTAGCTGTTCTGAAATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CCA 90 bp ATCATGGAACTCTTGCCCAAAGAAAAGACTGCAAATAGTCATCTGGTATATCTTAACCCCAGGGGAGGCTaGATGCGTCGAAGCAGAGTG +
Preference number: 4 (lower is better)
Translates to: IMELLPKEKTANSHLVYLNPRGG*MRRSRV
Trigger: CACTCTGCTTCGACGCATCCAGCCTCCCCTGGGGTT...AAGATATACCAGATGACTATTTGCAGTCTTTTCTTTGGGCAAGAGTTCCATGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR CCA 90 bp AGACAGTTGCAACCCATGGTGGATCCAAAGGTACAGTATCAAAATCATGGAACTCTGGGCCGCTTTCCATaGGCAGCTTTGGACATATTG +
Preference number: 4 (lower is better)
Translates to: RQLQPMVDPKVQYQNHGTLGRFP*AALDIL
Trigger: CAATATGTCCAAAGCTGCCCATGGAAAGCGGCCCAG...AGTTCCATGATTTTGATACTGTACCTTTGGATCCACCATGGGTTGCAACTGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR CCA 90 bp ACTGACTTTGGAAAAGATCATCGCCTCTATCAGACACTTAGGGTCCTGGTCTGGATAGCCATGTATCTCTaGGTCTTCCCGGCAAATAGT +
Preference number: 4 (lower is better)
Translates to: TDFGKDHRLYQTLRVLVWIAMYL*VFPANS
Trigger: ACTATTTGCCGGGAAGACCCAGAGATACATGGCTAT...CCAGACCAGGACCCTAAGTGTCTGATAGAGGCGATGATCTTTTCCAAAGTCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR CCA 90 bp ATGTCAGGAAAGAGTCATTTACAAACCTTGAAGTGTTTTTGCCTGGATCAGAGTTGCGATGGGGGAAGATaGGAGACGACGGGACCTCTT +
Preference number: 4 (lower is better)
Translates to: MSGKSHLQTLKCFCLDQSCDGGR*ETTGPL
Trigger: AAGAGGTCCCGTCGTCTCCCATCTTCCCCCATCGCA...ACTCTGATCCAGGCAAAAACACTTCAAGGTTTGTAAATGACTCTTTCCTGACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR CCA 90 bp ACTTACTTACTTACCAGAGGGTGGTTCAAGTCAAACAAACAAAACCAAAGACAGTGCGATGGGGGAAGATaGGAGACGACGGGACCTCTT +
Preference number: 4 (lower is better)
Translates to: TYLLTRGWFKSNKQNQRQCDGGR*ETTGPL
Trigger: AAGAGGTCCCGTCGTCTCCCATCTTCCCCCATCGCA...CTGTCTTTGGTTTTGTTTGTTTGACTTGAACCACCCTCTGGTAAGTAAGTAAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR CCA 90 bp GACTTACTTACACACCGTATTTCAGAACAGCTAAACAGGAACCAGGACGCAGTGGACAGTTGCAACCCATaGTGGATCCAAAGGTACAGT +
Preference number: 4 (lower is better)
Translates to: DLLTHRISEQLNRNQDAVDSCNP*WIQRYS
Trigger: ACTGTACCTTTGGATCCACCATGGGTTGCAACTGTC...CACTGCGTCCTGGTTCCTGTTTAGCTGTTCTGAAATACGGTGTGTAAGTAAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR CCA 90 bp GTTTCAGTAGAAATAAGCCCACTTGAGACTTTTCCCTTTCAAGGCCTTAGCCACGAGGTCATGGCGGACTaGCATACAAAAGGAACTCTG +
Preference number: 4 (lower is better)
Translates to: VSVEISPLETFPFQGLSHEVMAD*HTKGTL
Trigger: CAGAGTTCCTTTTGTATGCCAGTCCGCCATGACCTC...GTGGCTAAGGCCTTGAAAGGGAAAAGTCTCAAGTGGGCTTATTTCTACTGAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CCA 90 bp AAGGGAAAACTGTTAAGCTTTGTACGTTCCCTTTCACGAAAAAGAACCACCGTGACGCTCAGGAGGTCATaGCGGACTGGCATACAAAAG +
Preference number: 4 (lower is better)
Translates to: KGKLLSFVRSLSRKRTTVTLRRS*RTGIQK
Trigger: CTTTTGTATGCCAGTCCGCCATGACCTCCTGAGCGT...CACGGTGGTTCTTTTTCGTGAAAGGGAACGTACAAAGCTTAACAGTTTTCCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CCA 90 bp AAGGGAAAACTGTTAAGCTTTGTACGTTCCCTTTCACGAAAAAGAACCACCGTGCACTGTATTCTGGACTaGGTCTCTGCAGAGAGCAGG +
Preference number: 4 (lower is better)
Translates to: KGKLLSFVRSLSRKRTTVHCILD*VSAESR
Trigger: CCTGCTCTCTGCAGAGACCCAGTCCAGAATACAGTG...CACGGTGGTTCTTTTTCGTGAAAGGGAACGTACAAAGCTTAACAGTTTTCCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CCA 90 bp CAGGACTTTGGAATGGAGTCAGATACCCACCTTAGGCAGGTCTGCTTAATCTTTTGCCTGGATTGGTTTTaGCATGCGGGTGTATGTGTT +
Preference number: 4 (lower is better)
Translates to: QDFGMESDTHLRQVCLIFCLDWF*HAGVCV
Trigger: AACACATACACCCGCATGCCAAAACCAATCCAGGCA...AAAGATTAAGCAGACCTGCCTAAGGTGGGTATCTGACTCCATTCCAAAGTCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CCA 90 bp GTTTCAGTAGAAATAAGCCCACTTGAGACTTTTCCCTTTCAAGGCCTTAGCCACAGGTGTTGCCTGGATTaGTTTTGGCATGCGGGTGTA +
Preference number: 4 (lower is better)
Translates to: VSVEISPLETFPFQGLSHRCCLD*FWHAGV
Trigger: TACACCCGCATGCCAAAACCAATCCAGGCAACACCT...GTGGCTAAGGCCTTGAAAGGGAAAAGTCTCAAGTGGGCTTATTTCTACTGAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
3UTR CAA 72 bp AGGTTCCCAATGCTGGGCCGCTTTCCATGGGCAGCTTaGGACATATTGGCATTATTGAGATTGGCATTTGTT +
Preference number: 4 (lower is better)
Translates to: RFPMLGRFPWAA*DILALLRLAFV
Trigger: AACAAATGCCAATCTCAATAATGCCAATATGTCCAAAGCTGCCCATGGAAAGCGGCCCAGCATTGGGAACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR CAA 72 bp TTTCGTGTTTTGTTGCTGACACAAATTTTGGGTCCCTaGCATAGCGTCCCAAGCCTTCGGATATCAGGACTG +
Preference number: 4 (lower is better)
Translates to: FRVLLLTQILGP*HSVPSLRISGL
Trigger: CAGTCCTGATATCCGAAGGCTTGGGACGCTATGCAAGGGACCCAAAATTTGTGTCAGCAACAAAACACGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636448.1
CDS-3UTR TCA 90 bp GTGTTTCCTGTGGACACGTTAAGATGGAACCTGAGGTGTTGCCTGGATTGGTTTGTTAAGGACGAAAAATaGGCCAAGGATGATCAGACT +
Preference number: 4 (lower is better)
Translates to: VFPVDTLRWNLRCCLDWFVKDEK*AKDDQT
Trigger: AGTCTGATCATCCTTGGCTCATTTTTCGTCCTTAAC...AAACCAATCCAGGCAACACCTCAGGTTCCATCTTAACGTGTCCACAGGAAACAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR TCA 90 bp GTTCTTCATATCACCCCCAAAATAATCACACCAAATGGCCAAAGGGCTTTCTTTTGTCCTCAGCTTGGGTaGTCCAATCCAAGTAGCCCT +
Preference number: 4 (lower is better)
Translates to: VLHITPKIITPNGQRAFFCPQLG*SNPSSP
Trigger: AGGGCTACTTGGATTGGATCACCCAAGCTGAGGACA...AAAGAAAGCCCTTTGGCCATTTGGTGTGATTATTTTGGGGGTGATATGAAGAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000636627.1
CDS-3UTR TCA 90 bp TGTAATTCACTTACTTACTTACCAGAGGGTGGTTCAAGTCAAACAAACAAAACCGATTTTGAGATGGCTTaGCCCCACCGCCGACACCCA +
Preference number: 4 (lower is better)
Translates to: CNSLTYLPEGGSSQTNKTDFEMA*PHRRHP
Trigger: TGGGTGTCGGCGGTGGGGTCAAGCCATCTCAAAATC...GGTTTTGTTTGTTTGACTTGAACCACCCTCTGGTAAGTAAGTAAGTGAATTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000288139.11
CDS-3UTR TCA 90 bp TTCTTAAGCAGCACCACCAGTCCCCAGAGGACAAGAGCAGCTATATCTCATCCAAGCAATCAAACCGGTTaGAAAGAGAGACGAAATATG +
Preference number: 4 (lower is better)
Translates to: FLSSTTSPQRTRAAISHPSNQTG*KERRNM
Trigger: CATATTTCGTCTCTCTTTTCAACCGGTTTGATTGCT...TGGATGAGATATAGCTGCTCTTGTCCTCTGGGGACTGGTGGTGCTGCTTAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR TCA 90 bp AGACAGTTGCAACCCATGGTGGATCCAAAGGTACAGTATCAAAATCATGGAACTGGATTGAATCCCAAATaGCACCAGAGACACCCCAAC +
Preference number: 4 (lower is better)
Translates to: RQLQPMVDPKVQYQNHGTGLNPK*HQRHPN
Trigger: GTTGGGGTGTCTCTGGTGTCATTTGGGATTCAATCC...AGTTCCATGATTTTGATACTGTACCTTTGGATCCACCATGGGTTGCAACTGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR TCA 90 bp TATCCAAAAGTGGGTTTTCATCAGGACGTACAGTCAGAGTGTGAGTGCATTCTAGATAGAACTTCCCCTTaGACAACTGGACCCCGATAC +
Preference number: 4 (lower is better)
Translates to: YPKVGFHQDVQSECECILDRTSP*TTGPRY
Trigger: GTATCGGGGTCCAGTTGTTCAAGGGGAAGTTCTATC...TAGAATGCACTCACACTCTGACTGTACGTCCTGATGAAAACCCACTTTTGGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR TCA 90 bp TTGCAAACACTCTCTGGACTTTCTGGAGACACTAGCATTAAAACCAAAGCACTGGATAGAACTTCCCCTTaGACAACTGGACCCCGATAC +
Preference number: 4 (lower is better)
Translates to: LQTLSGLSGDTSIKTKALDRTSP*TTGPRY
Trigger: GTATCGGGGTCCAGTTGTTCAAGGGGAAGTTCTATC...CAGTGCTTTGGTTTTAATGCTAGTGTCTCCAGAAAGTCCAGAGAGTGTTTGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000636627.1
CDS-3UTR TCA 90 bp TACGTTCAAAGTGCTTTACAATCACTTAGCTATTCCTCACAACAGCCCTGTGAGGATAGAACTTCCCCTTaGACAACTGGACCCCGATAC +
Preference number: 4 (lower is better)
Translates to: YVQSALQSLSYSSQQPCEDRTSP*TTGPRY
Trigger: GTATCGGGGTCCAGTTGTTCAAGGGGAAGTTCTATC...CTCACAGGGCTGTTGTGAGGAATAGCTAAGTGATTGTAAAGCACTTTGAACGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000645528.2
CDS-3UTR TCA 90 bp GTTTCAGTAGAAATAAGCCCACTTGAGACTTTTCCCTTTCAAGGCCTTAGCCACTGTCCATGGCATCATTaGACATCTTGGACTGCTCGT +
Preference number: 4 (lower is better)
Translates to: VSVEISPLETFPFQGLSHCPWHH*TSWTAR
Trigger: ACGAGCAGTCCAAGATGTTCAATGATGCCATGGACA...GTGGCTAAGGCCTTGAAAGGGAAAAGTCTCAAGTGGGCTTATTTCTACTGAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000636938.1
ENST00000638120.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR TCA 90 bp TTGGACCAAAATTGCTACCTATCATCTATCTTTTTGATTGCAGGGAATCCCTGCTGCTGCCGATTACGATaGGGGAGTCAAACGTGTTCC +
Preference number: 4 (lower is better)
Translates to: LDQNCYLSSIFLIAGNPCCCRLR*GSQTCS
Trigger: GGAACACGTTTGACTCCCTCATCGTAATCGGCAGCA...GCAGGGATTCCCTGCAATCAAAAAGATAGATGATAGGTAGCAATTTTGGTCCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR TCA 90 bp ATGTCAGGAAAGAGTCATTTACAAACCTTGAAGTGTTTTTGCCTGGATCAGAGTCCCGGGGTTGTAATCTaGCTCAGGGTCACAGAGCTT +
Preference number: 4 (lower is better)
Translates to: MSGKSHLQTLKCFCLDQSPGVVI*LRVTEL
Trigger: AAGCTCTGTGACCCTGAGTCAGATTACAACCCCGGG...ACTCTGATCCAGGCAAAAACACTTCAAGGTTTGTAAATGACTCTTTCCTGACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR TCA 90 bp GTTAAGCTTTGTACGTTCCCTTTCACGAAAAAGAACCACCGTGAGCAACGTCCGAATTCATCTAAATGGTaGGGCCCCAAAATAGACCAG +
Preference number: 4 (lower is better)
Translates to: VKLCTFPFTKKNHREQRPNSSKW*GPKIDQ
Trigger: CTGGTCTATTTTGGGGCCTCACCATTTAGATGAATT...CGGACGTTGCTCACGGTGGTTCTTTTTCGTGAAAGGGAACGTACAAAGCTTAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR TCA 90 bp GCTGTTTCAGTAGAAATAAGCCCACTTGAGACTTTTCCCTTTCAAGGCCTTAGCTGCGTCGAAGCAGAGTaGCCACATCAAGGTGTTTTA +
Preference number: 4 (lower is better)
Translates to: AVSVEISPLETFPFQGLSCVEAE*PHQGVL
Trigger: TAAAACACCTTGATGTGGTCACTCTGCTTCGACGCA...GCTAAGGCCTTGAAAGGGAAAAGTCTCAAGTGGGCTTATTTCTACTGAAACAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000636938.1
ENST00000638120.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR TCA 90 bp TCTAATTATCCAAAAGTGGGTTTTCATCAGGACGTACAGTCAGAGTGTGAGTGCAGCATTCCTCACTACTaGAATACTCCTGCTCCCCCA +
Preference number: 4 (lower is better)
Translates to: SNYPKVGFHQDVQSECECSIPHY*NTPAPP
Trigger: TGGGGGAGCAGGAGTATTTCAGTAGTGAGGAATGCT...GCACTCACACTCTGACTGTACGTCCTGATGAAAACCCACTTTTGGATAATTAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR TCA 90 bp GTGTATCTGAGCTTCCTGGCCTGTCCACTTCTCACTGTATTCTGGACTGGGTCTTTCCTGCATTTCTTCTaGAATGCTGTTTCAGTAGAA +
Preference number: 4 (lower is better)
Translates to: VYLSFLACPLLTVFWTGSFLHFF*NAVSVE
Trigger: TTCTACTGAAACAGCATTTCAGAAGAAATGCAGGAA...AGACCCAGTCCAGAATACAGTGAGAAGTGGACAGGCCAGGAAGCTCAGATACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR GCA 90 bp AAACCGACCATCGGAGTGATATTCTCTTATGTAAACTGGCGTCACATCACAGAATCTAGCAGCATCGATTaGAGCTTGCCAAGACAGGAC +
Preference number: 4 (lower is better)
Translates to: KPTIGVIFSYVNWRHITESSSID*SLPRQD
Trigger: GTCCTGTCTTGGCAAGCTGCAATCGATGCTGCTAGA...TTCTGTGATGTGACGCCAGTTTACATAAGAGAATATCACTCCGATGGTCGGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR GCA 90 bp GAATGTTCTTCATATCACCCCCAAAATAATCACACCAAATGGCCAAAGGGCTTTCACTCCTACATTCCGTaGCATTGGCAGTACACTGGC +
Preference number: 4 (lower is better)
Translates to: ECSSYHPQNNHTKWPKGFHSYIP*HWQYTG
Trigger: GCCAGTGTACTGCCAATGGCACGGAATGTAGGAGTG...AAAGCCCTTTGGCCATTTGGTGTGATTATTTTGGGGGTGATATGAAGAACATTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636627.1
CDS-3UTR GCA 90 bp AGGAACCAGGAGGATAAGAATATCCATAATTTCAGAGCTGCCCTGGCACAGTACAAGAGAGACGAAATATaGTTGGAGGCCCAAGCTGTA +
Preference number: 4 (lower is better)
Translates to: RNQEDKNIHNFRAALAQYKRDEI*LEAQAV
Trigger: TACAGCTTGGGCCTCCAAGCATATTTCGTCTCTCTT...GTACTGTGCCAGGGCAGCTCTGAAATTATGGATATTCTTATCCTCCTGGTTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR GCA 90 bp TGCAAACACTCTCTGGACTTTCTGGAGACACTAGCATTAAAACCAAAGCACTGGCTCAGGGAAGTCCAGTaGCTGGTCACTTTGAAGATT +
Preference number: 4 (lower is better)
Translates to: CKHSLDFLETLALKPKHWLREVQ*LVTLKI
Trigger: AATCTTCAAAGTGACCAGGCACTGGACTTCCCTGAG...CCAGTGCTTTGGTTTTAATGCTAGTGTCTCCAGAAAGTCCAGAGAGTGTTTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636627.1
CDS-3UTR GCA 90 bp TATCACCCCCAAAATAATCACACCAAATGGCCAAAGGGCTTTCTTTATCAGTTGAGGATGCCACTAAGTTaGTCAGGGAAGTCCAGTGCC +
Preference number: 4 (lower is better)
Translates to: YHPQNNHTKWPKGFLYQLRMPLS*SGKSSA
Trigger: GGCACTGGACTTCCCTGAGCAACTTAGTGGCATCCT...CAACTGATAAAGAAAGCCCTTTGGCCATTTGGTGTGATTATTTTGGGGGTGATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636627.1
CDS-3UTR GCA 90 bp CACCAGTCCCCAGAGGACAAGAGCAGCTATATCTCATCCACCTATGCATTTCTGGTGCTCCGCTTGGTTTaGGTTTCATCAAAATTAAAC +
Preference number: 4 (lower is better)
Translates to: HQSPEDKSSYISSTYAFLVLRLV*VSSKLN
Trigger: GTTTAATTTTGATGAAACGCAAACCAAGCGGAGCAC...CAGAAATGCATAGGTGGATGAGATATAGCTGCTCTTGTCCTCTGGGGACTGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR GCA 90 bp TTTGGGTGTGGTGGTGTTTCCTGTGGACACGTTAAGATGGAACCTGAGGTGTTGGTGCTCCGCTTGGTTTaGGTTTCATCAAAATTAAAC +
Preference number: 4 (lower is better)
Translates to: FGCGGVSCGHVKMEPEVLVLRLV*VSSKLN
Trigger: GTTTAATTTTGATGAAACGCAAACCAAGCGGAGCAC...CAACACCTCAGGTTCCATCTTAACGTGTCCACAGGAAACACCACCACACCCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636938.1
CDS-3UTR GCA 90 bp CAGTCCCCAGAGGACAAGAGCAGCTATATCTCATCCACCTATGCATTTCTGCACCCCCTTAGGCTTAAATaGGATGACTTTCAAAACCAT +
Preference number: 4 (lower is better)
Translates to: QSPEDKSSYISSTYAFLHPLRLK*DDFQNH
Trigger: ATGGTTTTGAAAGTCATCGCATTTAAGCCTAAGGGG...GTGCAGAAATGCATAGGTGGATGAGATATAGCTGCTCTTGTCCTCTGGGGACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR GCA 90 bp GTTTCAGTAGAAATAAGCCCACTTGAGACTTTTCCCTTTCAAGGCCTTAGCCACAGTTCTTCATTAGCTTaGTCCAGGTTCCCTTCGGTC +
Preference number: 4 (lower is better)
Translates to: VSVEISPLETFPFQGLSHSSSLA*SRFPSV
Trigger: GACCGAAGGGAACCTGGAGCAAGCTAATGAAGAACT...GTGGCTAAGGCCTTGAAAGGGAAAAGTCTCAAGTGGGCTTATTTCTACTGAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000636938.1
ENST00000638120.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR GCA 90 bp AACAAACTAGTGTATCTAAGTTTACCTGGTTGCGAGTGCATTATTATTCCAGTTTCTTCCTGGCTGCTCTaGCGGCGCAGGCACTCAAAG +
Preference number: 4 (lower is better)
Translates to: NKLVYLSLPGCECIIIPVSSWLL*RRRHSK
Trigger: CTTTGAGTGCCTGCGCCGGCAGAGCAGCCAGGAAGA...AACTGGAATAATAATGCACTCGCAACCAGGTAAACTTAGATACACTAGTTTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR GCA 90 bp AGACAGTTGCAACCCATGGTGGATCCAAAGGTACAGTATCAAAATCATGGAACTCTGTCCGCACTCCTCTaGTTGTCGCTGTTTTTGTTC +
Preference number: 4 (lower is better)
Translates to: RQLQPMVDPKVQYQNHGTLSALL*LSLFLF
Trigger: GAACAAAAACAGCGACAAGCAGAGGAGTGCGGACAG...AGTTCCATGATTTTGATACTGTACCTTTGGATCCACCATGGGTTGCAACTGTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR GCA 90 bp AGTGGGGAACTACAATTATTAGGACCCATGGATATTGCTGCAGTTCAAATACAAAAGCAGGGTGCTGGCTaGACTCTCCATCTCGTCGAT +
Preference number: 4 (lower is better)
Translates to: SGELQLLGPMDIAAVQIQKQGAG*TLHLVD
Trigger: ATCGACGAGATGGAGAGTGCAGCCAGCACCCTGCTT...TTGTATTTGAACTGCAGCAATATCCATGGGTCCTAATAATTGTAGTTCCCCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR GCA 90 bp AACAAACTAGTGTATCTAAGTTTACCTGGTTGCGAGTGCATTATTATTCCAGTTGAGCGCATGGTACTCTaGCAGGCTCAACCGCTTGGG +
Preference number: 4 (lower is better)
Translates to: NKLVYLSLPGCECIIIPVERMVL*QAQPLG
Trigger: CCCAAGCGGTTGAGCCTGGCAGAGTACCATGCGCTC...AACTGGAATAATAATGCACTCGCAACCAGGTAAACTTAGATACACTAGTTTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR GCA 90 bp TTTCAAGGCCTTAGCCACAAACGCCTTCCGACTAACCAGCTTGGTGCCGTAGCTGACATCTTTGTGCATTaGCTAGATTTCTTTAAAAGG +
Preference number: 4 (lower is better)
Translates to: FQGLSHKRLPTNQLGAVADIFVH*LDFFKR
Trigger: CCTTTTAAAGAAATCTAGGCAATGCACAAAGATGTC...AGCTACGGCACCAAGCTGGTTAGTCGGAAGGCGTTTGTGGCTAAGGCCTTGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636938.1
CDS-3UTR CCA 90 bp TGTTCTTCATATCACCCCCAAAATAATCACACCAAATGGCCAAAGGGCTTTCTTGAACGCACATGGAGCTaGGTCCTCTTCAGCTACGAT +
Preference number: 4 (lower is better)
Translates to: CSSYHPQNNHTKWPKGFLERTWS*VLFSYD
Trigger: ATCGTAGCTGAAGAGGACCCAGCTCCATGTGCGTTC...AAGAAAGCCCTTTGGCCATTTGGTGTGATTATTTTGGGGGTGATATGAAGAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636627.1
CDS-3UTR CCA 90 bp CACCAAATGGCCAAAGGGCTTTCTTTATCAGTTGGCCTTAATGCTCTAAATGATGTTTGGATTTTGAGATaGCTTGACCCCACCGCCGAC +
Preference number: 4 (lower is better)
Translates to: HQMAKGLSLSVGLNALNDVWILR*LDPTAD
Trigger: GTCGGCGGTGGGGTCAAGCCATCTCAAAATCCAAAC...ATCATTTAGAGCATTAAGGCCAACTGATAAAGAAAGCCCTTTGGCCATTTGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636627.1
CDS-3UTR CCA 90 bp GTCACATCACAGAAAACCTTATTTATGAGGTCCCATTGCCCTCGCAATAATCACTCGCCTGTCAGGATCTaGAACACTGTGAGAAGTGCT +
Preference number: 4 (lower is better)
Translates to: VTSQKTLFMRSHCPRNNHSPVRI*NTVRSA
Trigger: AGCACTTCTCACAGTGTTCCAGATCCTGACAGGCGA...GTGATTATTGCGAGGGCAATGGGACCTCATAAATAAGGTTTTCTGTGATGTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CCA 90 bp ATTCAAGATCAGACACCCTTATCGACCAACATCTTGGGCAAAAATCTGCTATTCTTCCTCTTCCCCTACTaGCACATCGCAAGGCGGATA +
Preference number: 4 (lower is better)
Translates to: IQDQTPLSTNILGKNLLFFLFPY*HIARRI
Trigger: TATCCGCCTTGCGATGTGCCAGTAGGGGAAGAGGAA...GAATAGCAGATTTTTGCCCAAGATGTTGGTCGATAAGGGTGTCTGATCTTGAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636938.1
CDS-3UTR CCA 90 bp GTTTCAGTAGAAATAAGCCCACTTGAGACTTTTCCCTTTCAAGGCCTTAGCCACAGGTTGGTGAAGATGTaGTGGTTGATGAGCTTGTGG +
Preference number: 4 (lower is better)
Translates to: VSVEISPLETFPFQGLSHRLVKM*WLMSLW
Trigger: CCACAAGCTCATCAACCACCACATCTTCACCAACCT...GTGGCTAAGGCCTTGAAAGGGAAAAGTCTCAAGTGGGCTTATTTCTACTGAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR CCA 90 bp GCTGTTTCAGTAGAAATAAGCCCACTTGAGACTTTTCCCTTTCAAGGCCTTAGCCAGAAGGCCCCTTTGTaGAGGAAAGCTCCAAAAGTT +
Preference number: 4 (lower is better)
Translates to: AVSVEISPLETFPFQGLSQKAPL*RKAPKV
Trigger: AACTTTTGGAGCTTTCCTCCACAAAGGGGCCTTCTG...GCTAAGGCCTTGAAAGGGAAAAGTCTCAAGTGGGCTTATTTCTACTGAAACAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CCA 90 bp TGCAACCCATGGTGGATCCAAAGGTACAGTATCAAAATCATGGAACTCTTGCCCTCTTCACAACGGAGATaGCACTGGATTGAATCCCAA +
Preference number: 4 (lower is better)
Translates to: CNPWWIQRYSIKIMELLPSSQRR*HWIESQ
Trigger: TTGGGATTCAATCCAGTGCCATCTCCGTTGTGAAGA...GGGCAAGAGTTCCATGATTTTGATACTGTACCTTTGGATCCACCATGGGTTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR CCA 90 bp CACCCCCAAAATAATCACACCAAATGGCCAAAGGGCTTTCTTTATCAGTTGGCCTCTTCACAACGGAGATaGCACTGGATTGAATCCCAA +
Preference number: 4 (lower is better)
Translates to: HPQNNHTKWPKGFLYQLASSQRR*HWIESQ
Trigger: TTGGGATTCAATCCAGTGCCATCTCCGTTGTGAAGA...GGCCAACTGATAAAGAAAGCCCTTTGGCCATTTGGTGTGATTATTTTGGGGGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636627.1
CDS-3UTR CCA 90 bp AAACCGACCATCGGAGTGATATTCTCTTATGTAAACTGGCGTCACATCACAGAATTCCCCTTGAACAACTaGACCCCGATACAGGCAAAC +
Preference number: 4 (lower is better)
Translates to: KPTIGVIFSYVNWRHITEFPLNN*TPIQAN
Trigger: GTTTGCCTGTATCGGGGTCCAGTTGTTCAAGGGGAA...TTCTGTGATGTGACGCCAGTTTACATAAGAGAATATCACTCCGATGGTCGGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CCA 90 bp TGCAACCCATGGTGGATCCAAAGGTACAGTATCAAAATCATGGAACTCTTGCCCCTTCAGGGTTACTTTTaGCTTCATCCGTACAGCGAT +
Preference number: 4 (lower is better)
Translates to: CNPWWIQRYSIKIMELLPLQGYF*LHPYSD
Trigger: ATCGCTGTACGGATGAAGCCAAAAGTAACCCTGAAG...GGGCAAGAGTTCCATGATTTTGATACTGTACCTTTGGATCCACCATGGGTTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR CCA 90 bp AAGGGAAAACTGTTAAGCTTTGTACGTTCCCTTTCACGAAAAAGAACCACCGTGGCGGTGGTTGTAGATTaGGCCGATGTTCTCTCCATT +
Preference number: 4 (lower is better)
Translates to: KGKLLSFVRSLSRKRTTVAVVVD*ADVLSI
Trigger: AATGGAGAGAACATCGGCCCAATCTACAACCACCGC...CACGGTGGTTCTTTTTCGTGAAAGGGAACGTACAAAGCTTAACAGTTTTCCCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CCA 90 bp TACGTTCAAAGTGCTTTACAATCACTTAGCTATTCCTCACAACAGCCCTGTGAGACTGGTAGGGGTTTTTaGGGATGTATCTCCGCAAGG +
Preference number: 4 (lower is better)
Translates to: YVQSALQSLSYSSQQPCETGRGF*GCISAR
Trigger: CCTTGCGGAGATACATCCCCAAAAACCCCTACCAGT...CTCACAGGGCTGTTGTGAGGAATAGCTAAGTGATTGTAAAGCACTTTGAACGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000645528.2
CDS-3UTR CCA 90 bp ATGTCAGGAAAGAGTCATTTACAAACCTTGAAGTGTTTTTGCCTGGATCAGAGTGTCACAGAGCTTCCCTaGGAGACAGGCCAGCATGAT +
Preference number: 4 (lower is better)
Translates to: MSGKSHLQTLKCFCLDQSVTELP*ETGQHD
Trigger: ATCATGCTGGCCTGTCTCCCAGGGAAGCTCTGTGAC...ACTCTGATCCAGGCAAAAACACTTCAAGGTTTGTAAATGACTCTTTCCTGACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR CCA 90 bp AAGGGAAAACTGTTAAGCTTTGTACGTTCCCTTTCACGAAAAAGAACCACCGTGCTCATCATCACCAGCTaGAGGGACAACTTGGTCAAG +
Preference number: 4 (lower is better)
Translates to: KGKLLSFVRSLSRKRTTVLIITS*RDNLVK
Trigger: CTTGACCAAGTTGTCCCTCCAGCTGGTGATGATGAG...CACGGTGGTTCTTTTTCGTGAAAGGGAACGTACAAAGCTTAACAGTTTTCCCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CCA 90 bp AACAAACTAGTGTATCTAAGTTTACCTGGTTGCGAGTGCATTATTATTCCAGTTAAGGAGGATCTCCGGTaGGATGCTGGGGTGGGAGGT +
Preference number: 4 (lower is better)
Translates to: NKLVYLSLPGCECIIIPVKEDLR*DAGVGG
Trigger: ACCTCCCACCCCAGCATCCCACCGGAGATCCTCCTT...AACTGGAATAATAATGCACTCGCAACCAGGTAAACTTAGATACACTAGTTTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CCA 90 bp AACAAACTAGTGTATCTAAGTTTACCTGGTTGCGAGTGCATTATTATTCCAGTTTCAGTTGGGTGGGCCTaGTGCCCTGGTACATGGGAG +
Preference number: 4 (lower is better)
Translates to: NKLVYLSLPGCECIIIPVSVGWA*CPGTWE
Trigger: CTCCCATGTACCAGGGCACCAGGCCCACCCAACTGA...AACTGGAATAATAATGCACTCGCAACCAGGTAAACTTAGATACACTAGTTTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CCA 90 bp GTGTTTCCTGTGGACACGTTAAGATGGAACCTGAGGTGTTGCCTGGATTGGTTTGTTTGGATTTTGAGATaGCTTGACAGAGACTTCCAC +
Preference number: 4 (lower is better)
Translates to: VFPVDTLRWNLRCCLDWFVWILR*LDRDFH
Trigger: GTGGAAGTCTCTGTCAAGCCATCTCAAAATCCAAAC...AAACCAATCCAGGCAACACCTCAGGTTCCATCTTAACGTGTCCACAGGAAACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636938.1
CDS-3UTR CCA 90 bp GTTTCAGTAGAAATAAGCCCACTTGAGACTTTTCCCTTTCAAGGCCTTAGCCACTCTGTAGGGCAATTGTaGTGTTCTTCGCAGGGTACT +
Preference number: 4 (lower is better)
Translates to: VSVEISPLETFPFQGLSHSVGQL*CSSQGT
Trigger: AGTACCCTGCGAAGAACACCACAATTGCCCTACAGA...GTGGCTAAGGCCTTGAAAGGGAAAAGTCTCAAGTGGGCTTATTTCTACTGAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000636938.1
ENST00000638120.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CCA 90 bp TACGTTCAAAGTGCTTTACAATCACTTAGCTATTCCTCACAACAGCCCTGTGAGGAGGTCATGGCGGACTaGCATACAAAAGGAACTCTG +
Preference number: 4 (lower is better)
Translates to: YVQSALQSLSYSSQQPCEEVMAD*HTKGTL
Trigger: CAGAGTTCCTTTTGTATGCCAGTCCGCCATGACCTC...CTCACAGGGCTGTTGTGAGGAATAGCTAAGTGATTGTAAAGCACTTTGAACGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000645528.2
CDS-3UTR CCA 90 bp GTTTCAGTAGAAATAAGCCCACTTGAGACTTTTCCCTTTCAAGGCCTTAGCCACCTTCTCACTGTATTCTaGACTGGGTCTCTGCAGAGA +
Preference number: 4 (lower is better)
Translates to: VSVEISPLETFPFQGLSHLLTVF*TGSLQR
Trigger: TCTCTGCAGAGACCCAGTCCAGAATACAGTGAGAAG...GTGGCTAAGGCCTTGAAAGGGAAAAGTCTCAAGTGGGCTTATTTCTACTGAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CCA 90 bp GTTTCAGTAGAAATAAGCCCACTTGAGACTTTTCCCTTTCAAGGCCTTAGCCACCTCCATTCGAGTCGATaGCTTTATACAGCAACCCCA +
Preference number: 4 (lower is better)
Translates to: VSVEISPLETFPFQGLSHLHSSR*LYTATP
Trigger: TGGGGTTGCTGTATAAAGCCATCGACTCGAATGGAG...GTGGCTAAGGCCTTGAAAGGGAAAAGTCTCAAGTGGGCTTATTTCTACTGAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638120.1
3UTR CAA 72 bp CCCTGCCAAGGTAACCTGACAGTCGGCCTAATTCTGTaGACAGAAAATGAAGCCTTGACGGTTCTAATTATC +
Preference number: 4 (lower is better)
Translates to: PCQGNLTVGLIL*TENEALTVLII
Trigger: GATAATTAGAACCGTCAAGGCTTCATTTTCTGTCAACAGAATTAGGCCGACTGTCAGGTTACCTTGGCAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR TCA 90 bp ACTTACTTACTTACCAGAGGGTGGTTCAAGTCAAACAAACAAAACCAAAGACAGGCTGAGTTTGGATTTTaGGATGGCTTGACCCCACCG +
Preference number: 4 (lower is better)
Translates to: TYLLTRGWFKSNKQNQRQAEFGF*DGLTPP
Trigger: CGGTGGGGTCAAGCCATCTCAAAATCCAAACTCAGC...CTGTCTTTGGTTTTGTTTGTTTGACTTGAACCACCCTCTGGTAAGTAAGTAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000288139.11
CDS-3UTR TCA 90 bp CAAATGGCCAAAGGGCTTTCTTTATCAGTTGGCCTTAATGCTCTAAATGATACATCCCCAGGGGAGACATaGTTTCCAGTTCCACCAAGA +
Preference number: 4 (lower is better)
Translates to: QMAKGLSLSVGLNALNDTSPGET*FPVPPR
Trigger: TCTTGGTGGAACTGGAAATCATGTCTCCCCTGGGGA...TGTATCATTTAGAGCATTAAGGCCAACTGATAAAGAAAGCCCTTTGGCCATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636627.1
CDS-3UTR TCA 90 bp TATCCAAAAGTGGGTTTTCATCAGGACGTACAGTCAGAGTGTGAGTGCATTCTAGGATCTGGAACACTGTaGGAAGTGCTTGAGGGAAAT +
Preference number: 4 (lower is better)
Translates to: YPKVGFHQDVQSECECILGSGTL*EVLEGN
Trigger: ATTTCCCTCAAGCACTTCTCACAGTGTTCCAGATCC...TAGAATGCACTCACACTCTGACTGTACGTCCTGATGAAAACCCACTTTTGGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR TCA 90 bp AAACCGACCATCGGAGTGATATTCTCTTATGTAAACTGGCGTCACATCACAGAAGGATCTGGAACACTGTaGGAAGTGCTTGAGGGAAAT +
Preference number: 4 (lower is better)
Translates to: KPTIGVIFSYVNWRHITEGSGTL*EVLEGN
Trigger: ATTTCCCTCAAGCACTTCTCACAGTGTTCCAGATCC...TTCTGTGATGTGACGCCAGTTTACATAAGAGAATATCACTCCGATGGTCGGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR TCA 90 bp GTTTCAGTAGAAATAAGCCCACTTGAGACTTTTCCCTTTCAAGGCCTTAGCCACCATCCTTGTAGAGGATaGAAAGTCCCCTGCATTCTT +
Preference number: 4 (lower is better)
Translates to: VSVEISPLETFPFQGLSHHPCRG*KVPCIL
Trigger: AAGAATGCAGGGGACTTTTCATCCTCTACAAGGATG...GTGGCTAAGGCCTTGAAAGGGAAAAGTCTCAAGTGGGCTTATTTCTACTGAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR TCA 90 bp TGCAACCCATGGTGGATCCAAAGGTACAGTATCAAAATCATGGAACTCTTGCCCAATTCATCTAAATGGTaGGGCCCCAAAATAGACCAG +
Preference number: 4 (lower is better)
Translates to: CNPWWIQRYSIKIMELLPNSSKW*GPKIDQ
Trigger: CTGGTCTATTTTGGGGCCTCACCATTTAGATGAATT...GGGCAAGAGTTCCATGATTTTGATACTGTACCTTTGGATCCACCATGGGTTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR TCA 90 bp AAACCGACCATCGGAGTGATATTCTCTTATGTAAACTGGCGTCACATCACAGAATGCGTCGAAGCAGAGTaGCCACATCAAGGTGTTTTA +
Preference number: 4 (lower is better)
Translates to: KPTIGVIFSYVNWRHITECVEAE*PHQGVL
Trigger: TAAAACACCTTGATGTGGTCACTCTGCTTCGACGCA...TTCTGTGATGTGACGCCAGTTTACATAAGAGAATATCACTCCGATGGTCGGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR TCA 90 bp TACGTTCAAAGTGCTTTACAATCACTTAGCTATTCCTCACAACAGCCCTGTGAGTGCGTCGAAGCAGAGTaGCCACATCAAGGTGTTTTA +
Preference number: 4 (lower is better)
Translates to: YVQSALQSLSYSSQQPCECVEAE*PHQGVL
Trigger: TAAAACACCTTGATGTGGTCACTCTGCTTCGACGCA...CTCACAGGGCTGTTGTGAGGAATAGCTAAGTGATTGTAAAGCACTTTGAACGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000645528.2
CDS-3UTR TCA 90 bp TCTAATTATCCAAAAGTGGGTTTTCATCAGGACGTACAGTCAGAGTGTGAGTGCGTGGTATTGGTCTGCTaGAGGGAATCTCTCCTATCA +
Preference number: 4 (lower is better)
Translates to: SNYPKVGFHQDVQSECECVVLVC*RESLLS
Trigger: TGATAGGAGAGATTCCCTTCAGCAGACCAATACCAC...GCACTCACACTCTGACTGTACGTCCTGATGAAAACCCACTTTTGGATAATTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR TCA 90 bp AGACAGTTGCAACCCATGGTGGATCCAAAGGTACAGTATCAAAATCATGGAACTGTGGTATTGGTCTGCTaGAGGGAATCTCTCCTATCA +
Preference number: 4 (lower is better)
Translates to: RQLQPMVDPKVQYQNHGTVVLVC*RESLLS
Trigger: TGATAGGAGAGATTCCCTTCAGCAGACCAATACCAC...AGTTCCATGATTTTGATACTGTACCTTTGGATCCACCATGGGTTGCAACTGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR TCA 90 bp AAACCGACCATCGGAGTGATATTCTCTTATGTAAACTGGCGTCACATCACAGAAGAGATTGGCATTTGTTaGGGTGGGAACTTGCTTTCC +
Preference number: 4 (lower is better)
Translates to: KPTIGVIFSYVNWRHITEEIGIC*GGNLLS
Trigger: GGAAAGCAAGTTCCCACCTCAACAAATGCCAATCTC...TTCTGTGATGTGACGCCAGTTTACATAAGAGAATATCACTCCGATGGTCGGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR TCA 90 bp ACTTACTTACTTACCAGAGGGTGGTTCAAGTCAAACAAACAAAACCAAAGACAGGGTCGAGTGACTCGGTaGGTACTTCTGGGCTTTACT +
Preference number: 4 (lower is better)
Translates to: TYLLTRGWFKSNKQNQRQGRVTR*VLLGFT
Trigger: AGTAAAGCCCAGAAGTACTCACCGAGTCACTCGACC...CTGTCTTTGGTTTTGTTTGTTTGACTTGAACCACCCTCTGGTAAGTAAGTAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR TCA 90 bp TATTTCAGAACAGCTAAACAGGAACCAGGACGCAGTGTATTTGGGGGAAAGGGTTTCGTGTTTTGTTGCTaGCACAAATTTTGGGTCCCT +
Preference number: 4 (lower is better)
Translates to: YFRTAKQEPGRSVFGGKGFVFCC*HKFWVP
Trigger: AGGGACCCAAAATTTGTGTCAGCAACAAAACACGAA...ACCCTTTCCCCCAAATACACTGCGTCCTGGTTCCTGTTTAGCTGTTCTGAAATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR TCA 90 bp CGTATTTCAGAACAGCTAAACAGGAACCAGGACGCAGTGTATTTGGGGGAAAGGGGTTTATGGCTTTCTTaGGGCATGACATCTCTTATA +
Preference number: 4 (lower is better)
Translates to: RISEQLNRNQDAVYLGERGLWLS*GMTSLI
Trigger: TATAAGAGATGTCATGCCTCAAGAAAGCCATAAACC...CCTTTCCCCCAAATACACTGCGTCCTGGTTCCTGTTTAGCTGTTCTGAAATACG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR TCA 90 bp TCTAATTATCCAAAAGTGGGTTTTCATCAGGACGTACAGTCAGAGTGTGAGTGCAATTTTGGCCTGATGTaGTGCCACAAGACCCAACAG +
Preference number: 4 (lower is better)
Translates to: SNYPKVGFHQDVQSECECNFGLM*CHKTQQ
Trigger: CTGTTGGGTCTTGTGGCATCACATCAGGCCAAAATT...GCACTCACACTCTGACTGTACGTCCTGATGAAAACCCACTTTTGGATAATTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR TCA 90 bp GACAGTTGCAACCCATGGTGGATCCAAAGGTACAGTATCAAAATCATGGAACTCTATTCGATGAGAGGTTaGACCAGGCTTAAAGCAGAC +
Preference number: 4 (lower is better)
Translates to: DSCNPWWIQRYSIKIMELYSMRG*TRLKAD
Trigger: GTCTGCTTTAAGCCTGGTTCAACCTCTCATCGAATA...GAGTTCCATGATTTTGATACTGTACCTTTGGATCCACCATGGGTTGCAACTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR TCA 90 bp ATTCAAGATCAGACACCCTTATCGACCAACATCTTGGGCAAAAATCTGCTATTCACAGATGGGGGAAACTaGGGCACAGAGAGGTTAAGT +
Preference number: 4 (lower is better)
Translates to: IQDQTPLSTNILGKNLLFTDGGN*GTERLS
Trigger: ACTTAACCTCTCTGTGCCTCAGTTTCCCCCATCTGT...GAATAGCAGATTTTTGCCCAAGATGTTGGTCGATAAGGGTGTCTGATCTTGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000636938.1
CDS-3UTR TCA 90 bp AATGTTGATCTTAAAACCCAAACTGGCCACTTTGGGTGTCTTGGGCTCAGCATCGCTATTCTTAAGATGTaGAAATGCAACCTGCAGGGT +
Preference number: 4 (lower is better)
Translates to: NVDLKTQTGHFGCLGLSIAILKM*KCNLQG
Trigger: ACCCTGCAGGTTGCATTTTCACATCTTAAGAATAGC...GATGCTGAGCCCAAGACACCCAAAGTGGCCAGTTTGGGTTTTAAGATCAACATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636938.1
CDS-3UTR GCA 90 bp GCTGTTTCAGTAGAAATAAGCCCACTTGAGACTTTTCCCTTTCAAGGCCTTAGCAAAGAGGAAGTCTGGTaGCTCTTGCATAGTTTGCCT +
Preference number: 4 (lower is better)
Translates to: AVSVEISPLETFPFQGLSKEEVW*LLHSLP
Trigger: AGGCAAACTATGCAAGAGGCACCAGACTTCCTCTTT...GCTAAGGCCTTGAAAGGGAAAAGTCTCAAGTGGGCTTATTTCTACTGAAACAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR GCA 90 bp TTGGACCAAAATTGCTACCTATCATCTATCTTTTTGATTGCAGGGAATCCCTGCGCATCGATTGCAGCTTaGCAAGACAGGACAGTTTGC +
Preference number: 4 (lower is better)
Translates to: LDQNCYLSSIFLIAGNPCASIAA*QDRTVC
Trigger: GCAAACTGTCCTGTCTTGGCAAGCTGCAATCGATGC...GCAGGGATTCCCTGCAATCAAAAAGATAGATGATAGGTAGCAATTTTGGTCCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR GCA 90 bp GTTTCAGTAGAAATAAGCCCACTTGAGACTTTTCCCTTTCAAGGCCTTAGCCACAAGAGAGACGAAATATaGTTGGAGGCCCAAGCTGTA +
Preference number: 4 (lower is better)
Translates to: VSVEISPLETFPFQGLSHKRDEI*LEAQAV
Trigger: TACAGCTTGGGCCTCCAAGCATATTTCGTCTCTCTT...GTGGCTAAGGCCTTGAAAGGGAAAAGTCTCAAGTGGGCTTATTTCTACTGAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR GCA 90 bp CACCAAATGGCCAAAGGGCTTTCTTTATCAGTTGGCCTTAATGCTCTAAATGATTTGCCGCCAAACAGCTaGATCCCAAGCAAGGAAAAG +
Preference number: 4 (lower is better)
Translates to: HQMAKGLSLSVGLNALNDLPPNS*IPSKEK
Trigger: CTTTTCCTTGCTTGGGATGCAGCTGTTTGGCGGCAA...ATCATTTAGAGCATTAAGGCCAACTGATAAAGAAAGCCCTTTGGCCATTTGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636627.1
CDS-3UTR GCA 90 bp CACTCTCTGGACTTTCTGGAGACACTAGCATTAAAACCAAAGCACTGGCCAAGGGAACACTGTGAGAAGTaGTTGAGGGAAATTGTCAAA +
Preference number: 4 (lower is better)
Translates to: HSLDFLETLALKPKHWPREHCEK*LREIVK
Trigger: TTTGACAATTTCCCTCAAGCACTTCTCACAGTGTTC...CCTTGGCCAGTGCTTTGGTTTTAATGCTAGTGTCTCCAGAAAGTCCAGAGAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636627.1
CDS-3UTR GCA 90 bp TTTCCTGTGGACACGTTAAGATGGAACCTGAGGTGTTGCCTGGATTGGTTTTGGGAACACTGTGAGAAGTaGTTGAGGGAAATTGTCAAA +
Preference number: 4 (lower is better)
Translates to: FPVDTLRWNLRCCLDWFWEHCEK*LREIVK
Trigger: TTTGACAATTTCCCTCAAGCACTTCTCACAGTGTTC...CCAAAACCAATCCAGGCAACACCTCAGGTTCCATCTTAACGTGTCCACAGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR GCA 90 bp GACAGTTGCAACCCATGGTGGATCCAAAGGTACAGTATCAAAATCATGGAACTCTTGAAATCACTGTTTTaGCAGATCCGTTCACGGACC +
Preference number: 4 (lower is better)
Translates to: DSCNPWWIQRYSIKIMELLKSLF*QIRSRT
Trigger: GGTCCGTGAACGGATCTGGCAAAACAGTGATTTCAA...GAGTTCCATGATTTTGATACTGTACCTTTGGATCCACCATGGGTTGCAACTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR GCA 90 bp TGCAAACACTCTCTGGACTTTCTGGAGACACTAGCATTAAAACCAAAGCACTGGTTGAAATCACTGTTTTaGCAGATCCGTTCACGGACC +
Preference number: 4 (lower is better)
Translates to: CKHSLDFLETLALKPKHWLKSLF*QIRSRT
Trigger: GGTCCGTGAACGGATCTGGCAAAACAGTGATTTCAA...CCAGTGCTTTGGTTTTAATGCTAGTGTCTCCAGAAAGTCCAGAGAGTGTTTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636627.1
CDS-3UTR GCA 90 bp TGCAACCCATGGTGGATCCAAAGGTACAGTATCAAAATCATGGAACTCTTGCCCTCAGGCTCGTCATCTTaGAAATCACACGATATAGCA +
Preference number: 4 (lower is better)
Translates to: CNPWWIQRYSIKIMELLPSGSSS*KSHDIA
Trigger: TGCTATATCGTGTGATTTGCAAGATGACGAGCCTGA...GGGCAAGAGTTCCATGATTTTGATACTGTACCTTTGGATCCACCATGGGTTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR GCA 90 bp ACTGGCGTCACATCACAGAAAACCTTATTTATGAGGTCCCATTGCCCTCGCAATTCAGGCTCGTCATCTTaGAAATCACACGATATAGCA +
Preference number: 4 (lower is better)
Translates to: TGVTSQKTLFMRSHCPRNSGSSS*KSHDIA
Trigger: TGCTATATCGTGTGATTTGCAAGATGACGAGCCTGA...ATTGCGAGGGCAATGGGACCTCATAAATAAGGTTTTCTGTGATGTGACGCCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR GCA 90 bp TATTTCAGAACAGCTAAACAGGAACCAGGACGCAGTGTATTTGGGGGAAAGGGTGTTGAGGTGGGAACTTaGTTTCCTATGGAATTATGG +
Preference number: 4 (lower is better)
Translates to: YFRTAKQEPGRSVFGGKGVEVGT*FPMELW
Trigger: CCATAATTCCATAGGAAAGCAAGTTCCCACCTCAAC...ACCCTTTCCCCCAAATACACTGCGTCCTGGTTCCTGTTTAGCTGTTCTGAAATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR GCA 90 bp TCTAATTATCCAAAAGTGGGTTTTCATCAGGACGTACAGTCAGAGTGTGAGTGCAAATTTTGGGTCCCTTaGATAGCGTCCCAAGCCTTC +
Preference number: 4 (lower is better)
Translates to: SNYPKVGFHQDVQSECECKFWVP*IASQAF
Trigger: GAAGGCTTGGGACGCTATGCAAGGGACCCAAAATTT...GCACTCACACTCTGACTGTACGTCCTGATGAAAACCCACTTTTGGATAATTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR GCA 90 bp GTCACATCACAGAAAACCTTATTTATGAGGTCCCATTGCCCTCGCAATAATCACAAATTTTGGGTCCCTTaGATAGCGTCCCAAGCCTTC +
Preference number: 4 (lower is better)
Translates to: VTSQKTLFMRSHCPRNNHKFWVP*IASQAF
Trigger: GAAGGCTTGGGACGCTATGCAAGGGACCCAAAATTT...GTGATTATTGCGAGGGCAATGGGACCTCATAAATAAGGTTTTCTGTGATGTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR GCA 90 bp TGCAACCCATGGTGGATCCAAAGGTACAGTATCAAAATCATGGAACTCTTGCCCAAAACCAAAGACAGTTaGAACCCATGGTGGATCCAA +
Preference number: 4 (lower is better)
Translates to: CNPWWIQRYSIKIMELLPKTKDS*NPWWIQ
Trigger: TTGGATCCACCATGGGTTGCAACTGTCTTTGGTTTT...GGGCAAGAGTTCCATGATTTTGATACTGTACCTTTGGATCCACCATGGGTTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR GCA 90 bp ATGTCAGGAAAGAGTCATTTACAAACCTTGAAGTGTTTTTGCCTGGATCAGAGTTATAGATCACCACGTTaGTCCTCTGTCCCCAGCACC +
Preference number: 4 (lower is better)
Translates to: MSGKSHLQTLKCFCLDQSYRSPR*SSVPST
Trigger: GGTGCTGGGGACAGAGGAGCAACGTGGTGATCTATA...ACTCTGATCCAGGCAAAAACACTTCAAGGTTTGTAAATGACTCTTTCCTGACAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR GCA 90 bp ATTCAAGATCAGACACCCTTATCGACCAACATCTTGGGCAAAAATCTGCTATTCGAAACTAGACCACACTaGTTCCAAAGAGGCATCCCC +
Preference number: 4 (lower is better)
Translates to: IQDQTPLSTNILGKNLLFETRPH*FQRGIP
Trigger: GGGGATGCCTCTTTGGAAGCAGTGTGGTCTAGTTTC...GAATAGCAGATTTTTGCCCAAGATGTTGGTCGATAAGGGTGTCTGATCTTGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636938.1
CDS-3UTR CCA 90 bp CGTATTTCAGAACAGCTAAACAGGAACCAGGACGCAGTGTATTTGGGGGAAAGGAGTGCTCAGAGGAAATaGTTAAGGTGTTCAGAAACA +
Preference number: 4 (lower is better)
Translates to: RISEQLNRNQDAVYLGERSAQRK*LRCSET
Trigger: TGTTTCTGAACACCTTAACCATTTCCTCTGAGCACT...CCTTTCCCCCAAATACACTGCGTCCTGGTTCCTGTTTAGCTGTTCTGAAATACG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CCA 90 bp GCTGTTTCAGTAGAAATAAGCCCACTTGAGACTTTTCCCTTTCAAGGCCTTAGCCTGTGTCAACCAATCTaGCTGATTGTAGTGCTCAGA +
Preference number: 4 (lower is better)
Translates to: AVSVEISPLETFPFQGLSLCQPI*LIVVLR
Trigger: TCTGAGCACTACAATCAGCCAGATTGGTTGACACAG...GCTAAGGCCTTGAAAGGGAAAAGTCTCAAGTGGGCTTATTTCTACTGAAACAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR CCA 90 bp TGCAAACACTCTCTGGACTTTCTGGAGACACTAGCATTAAAACCAAAGCACTGGGAGACGAAATATGCTTaGAGGCCCAAGCTGTACATT +
Preference number: 4 (lower is better)
Translates to: CKHSLDFLETLALKPKHWETKYA*RPKLYI
Trigger: AATGTACAGCTTGGGCCTCCAAGCATATTTCGTCTC...CCAGTGCTTTGGTTTTAATGCTAGTGTCTCCAGAAAGTCCAGAGAGTGTTTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636627.1
CDS-3UTR CCA 90 bp TTTCCTGTGGACACGTTAAGATGGAACCTGAGGTGTTGCCTGGATTGGTTTTGGAAGCGATGGACTTCATaGAGTTTAATAAGGATGCCA +
Preference number: 4 (lower is better)
Translates to: FPVDTLRWNLRCCLDWFWKRWTS*SLIRMP
Trigger: TGGCATCCTTATTAAACTCCATGAAGTCCATCGCTT...CCAAAACCAATCCAGGCAACACCTCAGGTTCCATCTTAACGTGTCCACAGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR CCA 90 bp GACTTACTTACACACCGTATTTCAGAACAGCTAAACAGGAACCAGGACGCAGTGGCAACAGCGAAGCGATaGACTTCATGGAGTTTAATA +
Preference number: 4 (lower is better)
Translates to: DLLTHRISEQLNRNQDAVATAKR*TSWSLI
Trigger: TATTAAACTCCATGAAGTCCATCGCTTCGCTGTTGC...CACTGCGTCCTGGTTCCTGTTTAGCTGTTCTGAAATACGGTGTGTAAGTAAGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CCA 90 bp TATTTCAGAACAGCTAAACAGGAACCAGGACGCAGTGTATTTGGGGGAAAGGGTGCAACAGCGAAGCGATaGACTTCATGGAGTTTAATA +
Preference number: 4 (lower is better)
Translates to: YFRTAKQEPGRSVFGGKGATAKR*TSWSLI
Trigger: TATTAAACTCCATGAAGTCCATCGCTTCGCTGTTGC...ACCCTTTCCCCCAAATACACTGCGTCCTGGTTCCTGTTTAGCTGTTCTGAAATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CCA 90 bp AATGTTGATCTTAAAACCCAAACTGGCCACTTTGGGTGTCTTGGGCTCAGCATCCAAAGGTGCTCCGCTTaGTTTGCGTTTCATCAAAAT +
Preference number: 4 (lower is better)
Translates to: NVDLKTQTGHFGCLGLSIQRCSA*FAFHQN
Trigger: ATTTTGATGAAACGCAAACCAAGCGGAGCACCTTTG...GATGCTGAGCCCAAGACACCCAAAGTGGCCAGTTTGGGTTTTAAGATCAACATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636938.1
CDS-3UTR CCA 90 bp GTTCTTCATATCACCCCCAAAATAATCACACCAAATGGCCAAAGGGCTTTCTTTTCGCCTGTCAGGATCTaGAACACTGTGAGAAGTGCT +
Preference number: 4 (lower is better)
Translates to: VLHITPKIITPNGQRAFFSPVRI*NTVRSA
Trigger: AGCACTTCTCACAGTGTTCCAGATCCTGACAGGCGA...AAAGAAAGCCCTTTGGCCATTTGGTGTGATTATTTTGGGGGTGATATGAAGAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000636627.1
CDS-3UTR CCA 90 bp CAAATGGCCAAAGGGCTTTCTTTATCAGTTGGCCTTAATGCTCTAAATGATACATTCCTCTTCCCCTACTaGCACATCGCAAGGCGGATA +
Preference number: 4 (lower is better)
Translates to: QMAKGLSLSVGLNALNDTFLFPY*HIARRI
Trigger: TATCCGCCTTGCGATGTGCCAGTAGGGGAAGAGGAA...TGTATCATTTAGAGCATTAAGGCCAACTGATAAAGAAAGCCCTTTGGCCATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636627.1
CDS-3UTR CCA 90 bp GTTCTTCATATCACCCCCAAAATAATCACACCAAATGGCCAAAGGGCTTTCTTTGCGGTGGTTGTAGATTaGGCCGATGTTCTCTCCATT +
Preference number: 4 (lower is better)
Translates to: VLHITPKIITPNGQRAFFAVVVD*ADVLSI
Trigger: AATGGAGAGAACATCGGCCCAATCTACAACCACCGC...AAAGAAAGCCCTTTGGCCATTTGGTGTGATTATTTTGGGGGTGATATGAAGAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636627.1
CDS-3UTR CCA 90 bp GACAGTTGCAACCCATGGTGGATCCAAAGGTACAGTATCAAAATCATGGAACTCGCTGGAGGGACAACTTaGTCAAGTAATTTCATGCTG +
Preference number: 4 (lower is better)
Translates to: DSCNPWWIQRYSIKIMELAGGTT*SSNFML
Trigger: CAGCATGAAATTACTTGACCAAGTTGTCCCTCCAGC...GAGTTCCATGATTTTGATACTGTACCTTTGGATCCACCATGGGTTGCAACTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR CCA 90 bp GCTGTTTCAGTAGAAATAAGCCCACTTGAGACTTTTCCCTTTCAAGGCCTTAGCGCTGGAGGGACAACTTaGTCAAGTAATTTCATGCTG +
Preference number: 4 (lower is better)
Translates to: AVSVEISPLETFPFQGLSAGGTT*SSNFML
Trigger: CAGCATGAAATTACTTGACCAAGTTGTCCCTCCAGC...GCTAAGGCCTTGAAAGGGAAAAGTCTCAAGTGGGCTTATTTCTACTGAAACAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000636938.1
ENST00000638120.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CCA 90 bp TGTAATTCACTTACTTACTTACCAGAGGGTGGTTCAAGTCAAACAAACAAAACCGGAATTGAAGGCCTTTaGACATGCAGGGGACGGTGG +
Preference number: 4 (lower is better)
Translates to: CNSLTYLPEGGSSQTNKTGIEGL*TCRGRW
Trigger: CCACCGTCCCCTGCATGTCCAAAGGCCTTCAATTCC...GGTTTTGTTTGTTTGACTTGAACCACCCTCTGGTAAGTAAGTAAGTGAATTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR CCA 90 bp GTTTCAGTAGAAATAAGCCCACTTGAGACTTTTCCCTTTCAAGGCCTTAGCCACTGCAGGACTTTGGAATaGAGTCAGATACCCACCTTA +
Preference number: 4 (lower is better)
Translates to: VSVEISPLETFPFQGLSHCRTLE*SQIPTL
Trigger: TAAGGTGGGTATCTGACTCCATTCCAAAGTCCTGCA...GTGGCTAAGGCCTTGAAAGGGAAAAGTCTCAAGTGGGCTTATTTCTACTGAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CCA 90 bp AAGGGAAAACTGTTAAGCTTTGTACGTTCCCTTTCACGAAAAAGAACCACCGTGTGCCTGGATTGGTTTTaGCATGCGGGTGTATGTGTT +
Preference number: 4 (lower is better)
Translates to: KGKLLSFVRSLSRKRTTVCLDWF*HAGVCV
Trigger: AACACATACACCCGCATGCCAAAACCAATCCAGGCA...CACGGTGGTTCTTTTTCGTGAAAGGGAACGTACAAAGCTTAACAGTTTTCCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR TCA 90 bp GTGCATTCTAATGAAAACTTCAGCCCTCATTCAATTGCATATAAAAGCCCTCAAAGGCACGGAGGGCTTTaGCATCAAAGCCTCCAGATT +
Preference number: 4 (lower is better)
Translates to: VHSNENFSPHSIAYKSPQRHGGL*HQSLQI
Trigger: AATCTGGAGGCTTTGATGTCAAAGCCCTCCGTGCCT...TTGAGGGCTTTTATATGCAATTGAATGAGGGCTGAAGTTTTCATTAGAATGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR TCA 90 bp TCACTGAAGCCTCTCCTTTGTCTGGAATGTTCTTCATATCACCCCCAAAATAATAGTGCCTGGTCACTTTaGAGATTCTTAAGAGGCGCA +
Preference number: 4 (lower is better)
Translates to: SLKPLLCLECSSYHPQNNSAWSL*RFLRGA
Trigger: TGCGCCTCTTAAGAATCTTCAAAGTGACCAGGCACT...ATTATTTTGGGGGTGATATGAAGAACATTCCAGACAAAGGAGAGGCTTCAGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636627.1
CDS-3UTR TCA 90 bp TATCACCCCCAAAATAATCACACCAAATGGCCAAAGGGCTTTCTTTATCAGTTGGGATCTGGAACACTGTaGGAAGTGCTTGAGGGAAAT +
Preference number: 4 (lower is better)
Translates to: YHPQNNHTKWPKGFLYQLGSGTL*EVLEGN
Trigger: ATTTCCCTCAAGCACTTCTCACAGTGTTCCAGATCC...CAACTGATAAAGAAAGCCCTTTGGCCATTTGGTGTGATTATTTTGGGGGTGATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636627.1
CDS-3UTR TCA 90 bp AAACCGACCATCGGAGTGATATTCTCTTATGTAAACTGGCGTCACATCACAGAACATCCTTGTAGAGGATaGAAAGTCCCCTGCATTCTT +
Preference number: 4 (lower is better)
Translates to: KPTIGVIFSYVNWRHITEHPCRG*KVPCIL
Trigger: AAGAATGCAGGGGACTTTTCATCCTCTACAAGGATG...TTCTGTGATGTGACGCCAGTTTACATAAGAGAATATCACTCCGATGGTCGGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR TCA 90 bp TTTCCTGTGGACACGTTAAGATGGAACCTGAGGTGTTGCCTGGATTGGTTTTGGTTTTCTCCTTGTTCCTaGAATGTAACGATGACAAAG +
Preference number: 4 (lower is better)
Translates to: FPVDTLRWNLRCCLDWFWFSPCS*NVTMTK
Trigger: CTTTGTCATCGTTACATTTCAGGAACAAGGAGAAAA...CCAAAACCAATCCAGGCAACACCTCAGGTTCCATCTTAACGTGTCCACAGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR TCA 90 bp GTTCTTCATATCACCCCCAAAATAATCACACCAAATGGCCAAAGGGCTTTCTTTTGTCCATGGCATCATTaGACATCTTGGACTGCTCGT +
Preference number: 4 (lower is better)
Translates to: VLHITPKIITPNGQRAFFCPWHH*TSWTAR
Trigger: ACGAGCAGTCCAAGATGTTCAATGATGCCATGGACA...AAAGAAAGCCCTTTGGCCATTTGGTGTGATTATTTTGGGGGTGATATGAAGAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000636627.1
CDS-3UTR TCA 90 bp ATTCAAGATCAGACACCCTTATCGACCAACATCTTGGGCAAAAATCTGCTATTCTGTCCATGGCATCATTaGACATCTTGGACTGCTCGT +
Preference number: 4 (lower is better)
Translates to: IQDQTPLSTNILGKNLLFCPWHH*TSWTAR
Trigger: ACGAGCAGTCCAAGATGTTCAATGATGCCATGGACA...GAATAGCAGATTTTTGCCCAAGATGTTGGTCGATAAGGGTGTCTGATCTTGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636938.1
CDS-3UTR TCA 90 bp GACAGTTGCAACCCATGGTGGATCCAAAGGTACAGTATCAAAATCATGGAACTCAATTCATCTAAATGGTaGGGCCCCAAAATAGACCAG +
Preference number: 4 (lower is better)
Translates to: DSCNPWWIQRYSIKIMELNSSKW*GPKIDQ
Trigger: CTGGTCTATTTTGGGGCCTCACCATTTAGATGAATT...GAGTTCCATGATTTTGATACTGTACCTTTGGATCCACCATGGGTTGCAACTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR TCA 90 bp CTTCATATCACCCCCAAAATAATCACACCAAATGGCCAAAGGGCTTTCTTTATCTGCGTCGAAGCAGAGTaGCCACATCAAGGTGTTTTA +
Preference number: 4 (lower is better)
Translates to: LHITPKIITPNGQRAFFICVEAE*PHQGVL
Trigger: TAAAACACCTTGATGTGGTCACTCTGCTTCGACGCA...GATAAAGAAAGCCCTTTGGCCATTTGGTGTGATTATTTTGGGGGTGATATGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000636627.1
CDS-3UTR TCA 90 bp GTCACATCACAGAAAACCTTATTTATGAGGTCCCATTGCCCTCGCAATAATCACTGCTTGTGGGAAGAATaGTGCCCATTTTCAGACACA +
Preference number: 4 (lower is better)
Translates to: VTSQKTLFMRSHCPRNNHCLWEE*CPFSDT
Trigger: TGTGTCTGAAAATGGGCATCATTCTTCCCACAAGCA...GTGATTATTGCGAGGGCAATGGGACCTCATAAATAAGGTTTTCTGTGATGTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR TCA 90 bp AACAAACTAGTGTATCTAAGTTTACCTGGTTGCGAGTGCATTATTATTCCAGTTTCAGGCTGGCTGGTGTaGAAGTCCGGTAGGAGATGT +
Preference number: 4 (lower is better)
Translates to: NKLVYLSLPGCECIIIPVSGWLV*KSGRRC
Trigger: ACATCTCCTACCGGACTTTCACACCAGCCAGCCTGA...AACTGGAATAATAATGCACTCGCAACCAGGTAAACTTAGATACACTAGTTTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR TCA 90 bp TTGCAAACACTCTCTGGACTTTCTGGAGACACTAGCATTAAAACCAAAGCACTGGTTTTGGTTTTTCACTaGAGCCTCTCCTTTGTCTGG +
Preference number: 4 (lower is better)
Translates to: LQTLSGLSGDTSIKTKALVLVFH*SLSFVW
Trigger: CCAGACAAAGGAGAGGCTTCAGTGAAAAACCAAAAC...CAGTGCTTTGGTTTTAATGCTAGTGTCTCCAGAAAGTCCAGAGAGTGTTTGCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000636627.1
CDS-3UTR GCA 90 bp AGTGGGGAACTACAATTATTAGGACCCATGGATATTGCTGCAGTTCAAATACAATCTAGCAGCATCGATTaGAGCTTGCCAAGACAGGAC +
Preference number: 4 (lower is better)
Translates to: SGELQLLGPMDIAAVQIQSSSID*SLPRQD
Trigger: GTCCTGTCTTGGCAAGCTGCAATCGATGCTGCTAGA...TTGTATTTGAACTGCAGCAATATCCATGGGTCCTAATAATTGTAGTTCCCCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR GCA 90 bp TGTAATTCACTTACTTACTTACCAGAGGGTGGTTCAAGTCAAACAAACAAAACCCACTCCTACATTCCGTaGCATTGGCAGTACACTGGC +
Preference number: 4 (lower is better)
Translates to: CNSLTYLPEGGSSQTNKTHSYIP*HWQYTG
Trigger: GCCAGTGTACTGCCAATGGCACGGAATGTAGGAGTG...GGTTTTGTTTGTTTGACTTGAACCACCCTCTGGTAAGTAAGTAAGTGAATTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR GCA 90 bp CACCAAATGGCCAAAGGGCTTTCTTTATCAGTTGGCCTTAATGCTCTAAATGATCTGGAAATCTCCCCGTaGTTTTGCCTTCTCTCTTTC +
Preference number: 4 (lower is better)
Translates to: HQMAKGLSLSVGLNALNDLEISP*FCLLSF
Trigger: GAAAGAGAGAAGGCAAAAGCACGGGGAGATTTCCAG...ATCATTTAGAGCATTAAGGCCAACTGATAAAGAAAGCCCTTTGGCCATTTGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636627.1
CDS-3UTR GCA 90 bp AAGGGAAAACTGTTAAGCTTTGTACGTTCCCTTTCACGAAAAAGAACCACCGTGAAGAGAGACGAAATATaGTTGGAGGCCCAAGCTGTA +
Preference number: 4 (lower is better)
Translates to: KGKLLSFVRSLSRKRTTVKRDEI*LEAQAV
Trigger: TACAGCTTGGGCCTCCAAGCATATTTCGTCTCTCTT...CACGGTGGTTCTTTTTCGTGAAAGGGAACGTACAAAGCTTAACAGTTTTCCCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR GCA 90 bp TTGGACCAAAATTGCTACCTATCATCTATCTTTTTGATTGCAGGGAATCCCTGCCTCAGGGAAGTCCAGTaGCTGGTCACTTTGAAGATT +
Preference number: 4 (lower is better)
Translates to: LDQNCYLSSIFLIAGNPCLREVQ*LVTLKI
Trigger: AATCTTCAAAGTGACCAGGCACTGGACTTCCCTGAG...GCAGGGATTCCCTGCAATCAAAAAGATAGATGATAGGTAGCAATTTTGGTCCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR GCA 90 bp AGTGGGGAACTACAATTATTAGGACCCATGGATATTGCTGCAGTTCAAATACAATCTCCGCAAGGGACGTaGTTTCAAGGCGTATTCAAC +
Preference number: 4 (lower is better)
Translates to: SGELQLLGPMDIAAVQIQSPQGT*FQGVFN
Trigger: GTTGAATACGCCTTGAAAGCACGTCCCTTGCGGAGA...TTGTATTTGAACTGCAGCAATATCCATGGGTCCTAATAATTGTAGTTCCCCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR GCA 90 bp GTCACATCACAGAAAACCTTATTTATGAGGTCCCATTGCCCTCGCAATAATCACCCATTTTCAGACACATaGTCAAGGTTCCCAATGCTG +
Preference number: 4 (lower is better)
Translates to: VTSQKTLFMRSHCPRNNHPFSDT*SRFPML
Trigger: CAGCATTGGGAACCTTGAGCATGTGTCTGAAAATGG...GTGATTATTGCGAGGGCAATGGGACCTCATAAATAAGGTTTTCTGTGATGTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR GCA 90 bp AAACCGACCATCGGAGTGATATTCTCTTATGTAAACTGGCGTCACATCACAGAATTTATGAGGTCCCATTaGCCTCGCAATAATCACTGG +
Preference number: 4 (lower is better)
Translates to: KPTIGVIFSYVNWRHITEFMRSH*PRNNHW
Trigger: CCAGTGATTATTGCGAGGGCAATGGGACCTCATAAA...TTCTGTGATGTGACGCCAGTTTACATAAGAGAATATCACTCCGATGGTCGGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR GCA 90 bp GTTAAGCTTTGTACGTTCCCTTTCACGAAAAAGAACCACCGTGAGCAACGTCCGGTGCTTAGGCTTAAATaGGATGACTTTCAAAACCAT +
Preference number: 4 (lower is better)
Translates to: VKLCTFPFTKKNHREQRPVLRLK*DDFQNH
Trigger: ATGGTTTTGAAAGTCATCGCATTTAAGCCTAAGCAC...CGGACGTTGCTCACGGTGGTTCTTTTTCGTGAAAGGGAACGTACAAAGCTTAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000640483.1
ENST00000645528.2
CDS-3UTR GCA 90 bp GTTTCAGTAGAAATAAGCCCACTTGAGACTTTTCCCTTTCAAGGCCTTAGCCACCTTTCTCTGAGTCTCTaGTTGGAAGGGAAAACTGTT +
Preference number: 4 (lower is better)
Translates to: VSVEISPLETFPFQGLSHLSLSL*LEGKTV
Trigger: AACAGTTTTCCCTTCCAAGCAGAGACTCAGAGAAAG...GTGGCTAAGGCCTTGAAAGGGAAAAGTCTCAAGTGGGCTTATTTCTACTGAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CCA 90 bp AACAAACTAGTGTATCTAAGTTTACCTGGTTGCGAGTGCATTATTATTCCAGTTGAGAGATCCTACAGGTaGGGGTGCAGAGGTGCTCAT +
Preference number: 4 (lower is better)
Translates to: NKLVYLSLPGCECIIIPVERSYR*GCRGAH
Trigger: ATGAGCACCTCTGCACCCCCACCTGTAGGATCTCTC...AACTGGAATAATAATGCACTCGCAACCAGGTAAACTTAGATACACTAGTTTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CCA 90 bp ATGTCAGGAAAGAGTCATTTACAAACCTTGAAGTGTTTTTGCCTGGATCAGAGTTACATTCCGTGCCATTaGCAGTACACTGGCGTCCAT +
Preference number: 4 (lower is better)
Translates to: MSGKSHLQTLKCFCLDQSYIPCH*QYTGVH
Trigger: ATGGACGCCAGTGTACTGCCAATGGCACGGAATGTA...ACTCTGATCCAGGCAAAAACACTTCAAGGTTTGTAAATGACTCTTTCCTGACAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR CCA 90 bp CAAATGGCCAAAGGGCTTTCTTTATCAGTTGGCCTTAATGCTCTAAATGATACATACATTCCGTGCCATTaGCAGTACACTGGCGTCCAT +
Preference number: 4 (lower is better)
Translates to: QMAKGLSLSVGLNALNDTYIPCH*QYTGVH
Trigger: ATGGACGCCAGTGTACTGCCAATGGCACGGAATGTA...TGTATCATTTAGAGCATTAAGGCCAACTGATAAAGAAAGCCCTTTGGCCATTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636627.1
CDS-3UTR CCA 90 bp TACGTTCAAAGTGCTTTACAATCACTTAGCTATTCCTCACAACAGCCCTGTGAGGAGACGAAATATGCTTaGAGGCCCAAGCTGTACATT +
Preference number: 4 (lower is better)
Translates to: YVQSALQSLSYSSQQPCEETKYA*RPKLYI
Trigger: AATGTACAGCTTGGGCCTCCAAGCATATTTCGTCTC...CTCACAGGGCTGTTGTGAGGAATAGCTAAGTGATTGTAAAGCACTTTGAACGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636938.1
CDS-3UTR CCA 90 bp TATTTCAGAACAGCTAAACAGGAACCAGGACGCAGTGTATTTGGGGGAAAGGGTAAGCGATGGACTTCATaGAGTTTAATAAGGATGCCA +
Preference number: 4 (lower is better)
Translates to: YFRTAKQEPGRSVFGGKGKRWTS*SLIRMP
Trigger: TGGCATCCTTATTAAACTCCATGAAGTCCATCGCTT...ACCCTTTCCCCCAAATACACTGCGTCCTGGTTCCTGTTTAGCTGTTCTGAAATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CCA 90 bp GAATGTTCTTCATATCACCCCCAAAATAATCACACCAAATGGCCAAAGGGCTTTTTGGTGAAGATGTGGTaGTTGATGAGCTTGTGGCAG +
Preference number: 4 (lower is better)
Translates to: ECSSYHPQNNHTKWPKGFLVKMW*LMSLWQ
Trigger: CTGCCACAAGCTCATCAACCACCACATCTTCACCAA...AAAGCCCTTTGGCCATTTGGTGTGATTATTTTGGGGGTGATATGAAGAACATTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000636627.1
CDS-3UTR CCA 90 bp GAATGTTCTTCATATCACCCCCAAAATAATCACACCAAATGGCCAAAGGGCTTTAGGTTGGTGAAGATGTaGTGGTTGATGAGCTTGTGG +
Preference number: 4 (lower is better)
Translates to: ECSSYHPQNNHTKWPKGFRLVKM*WLMSLW
Trigger: CCACAAGCTCATCAACCACCACATCTTCACCAACCT...AAAGCCCTTTGGCCATTTGGTGTGATTATTTTGGGGGTGATATGAAGAACATTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636627.1
CDS-3UTR CCA 90 bp CACCAAATGGCCAAAGGGCTTTCTTTATCAGTTGGCCTTAATGCTCTAAATGATCAGAAGGCCCCTTTGTaGAGGAAAGCTCCAAAAGTT +
Preference number: 4 (lower is better)
Translates to: HQMAKGLSLSVGLNALNDQKAPL*RKAPKV
Trigger: AACTTTTGGAGCTTTCCTCCACAAAGGGGCCTTCTG...ATCATTTAGAGCATTAAGGCCAACTGATAAAGAAAGCCCTTTGGCCATTTGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636627.1
CDS-3UTR CCA 90 bp TACGTTCAAAGTGCTTTACAATCACTTAGCTATTCCTCACAACAGCCCTGTGAGCTTCAGGGTTACTTTTaGCTTCATCCGTACAGCGAT +
Preference number: 4 (lower is better)
Translates to: YVQSALQSLSYSSQQPCELQGYF*LHPYSD
Trigger: ATCGCTGTACGGATGAAGCCAAAAGTAACCCTGAAG...CTCACAGGGCTGTTGTGAGGAATAGCTAAGTGATTGTAAAGCACTTTGAACGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000645528.2
CDS-3UTR CCA 90 bp CCTCTCCTTTGTCTGGAATGTTCTTCATATCACCCCCAAAATAATCACACCAAACTCCATTCGAGTCGATaGCTTTATACAGCAACGCAG +
Preference number: 4 (lower is better)
Translates to: PLLCLECSSYHPQNNHTKLHSSR*LYTATQ
Trigger: CTGCGTTGCTGTATAAAGCCATCGACTCGAATGGAG...TTTGGTGTGATTATTTTGGGGGTGATATGAAGAACATTCCAGACAAAGGAGAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636627.1
CDS-3UTR CCA 90 bp CCCCAAAATAATCACACCAAATGGCCAAAGGGCTTTCTTTATCAGTTGGCCTTAGCTGGAGGGACAACTTaGTCAAGTAATTTCATGCTG +
Preference number: 4 (lower is better)
Translates to: PQNNHTKWPKGFLYQLALAGGTT*SSNFML
Trigger: CAGCATGAAATTACTTGACCAAGTTGTCCCTCCAGC...TAAGGCCAACTGATAAAGAAAGCCCTTTGGCCATTTGGTGTGATTATTTTGGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636627.1
CDS-3UTR CCA 90 bp AAGGGAAAACTGTTAAGCTTTGTACGTTCCCTTTCACGAAAAAGAACCACCGTGGCTGGAGGGACAACTTaGTCAAGTAATTTCATGCTG +
Preference number: 4 (lower is better)
Translates to: KGKLLSFVRSLSRKRTTVAGGTT*SSNFML
Trigger: CAGCATGAAATTACTTGACCAAGTTGTCCCTCCAGC...CACGGTGGTTCTTTTTCGTGAAAGGGAACGTACAAAGCTTAACAGTTTTCCCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CCA 90 bp AGACAGTTGCAACCCATGGTGGATCCAAAGGTACAGTATCAAAATCATGGAACTTGGCATTTGTTGAGGTaGGAACTTGCTTTCCTATGG +
Preference number: 4 (lower is better)
Translates to: RQLQPMVDPKVQYQNHGTWHLLR*ELAFLW
Trigger: CCATAGGAAAGCAAGTTCCCACCTCAACAAATGCCA...AGTTCCATGATTTTGATACTGTACCTTTGGATCCACCATGGGTTGCAACTGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR CCA 90 bp AAACCGACCATCGGAGTGATATTCTCTTATGTAAACTGGCGTCACATCACAGAAATAGCCATGTATCTCTaGGTCTTCCCGGCAAATAGT +
Preference number: 4 (lower is better)
Translates to: KPTIGVIFSYVNWRHITEIAMYL*VFPANS
Trigger: ACTATTTGCCGGGAAGACCCAGAGATACATGGCTAT...TTCTGTGATGTGACGCCAGTTTACATAAGAGAATATCACTCCGATGGTCGGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR TCA 90 bp ACTGGCGTCACATCACAGAAAACCTTATTTATGAGGTCCCATTGCCCTCGCAATTTGTTGGCAATATCTTaGATCTGTGTCAACCAATCT +
Preference number: 4 (lower is better)
Translates to: TGVTSQKTLFMRSHCPRNLLAIS*ICVNQS
Trigger: AGATTGGTTGACACAGATTCAAGATATTGCCAACAA...ATTGCGAGGGCAATGGGACCTCATAAATAAGGTTTTCTGTGATGTGACGCCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR TCA 90 bp CACCCCCAAAATAATCACACCAAATGGCCAAAGGGCTTTCTTTATCAGTTGGCCTTGTTGGCAATATCTTaGATCTGTGTCAACCAATCT +
Preference number: 4 (lower is better)
Translates to: HPQNNHTKWPKGFLYQLALLAIS*ICVNQS
Trigger: AGATTGGTTGACACAGATTCAAGATATTGCCAACAA...GGCCAACTGATAAAGAAAGCCCTTTGGCCATTTGGTGTGATTATTTTGGGGGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636627.1
CDS-3UTR TCA 90 bp TGTTCTTCATATCACCCCCAAAATAATCACACCAAATGGCCAAAGGGCTTTCTTCATCCTTGTAGAGGATaGAAAGTCCCCTGCATTCTT +
Preference number: 4 (lower is better)
Translates to: CSSYHPQNNHTKWPKGFLHPCRG*KVPCIL
Trigger: AAGAATGCAGGGGACTTTTCATCCTCTACAAGGATG...AAGAAAGCCCTTTGGCCATTTGGTGTGATTATTTTGGGGGTGATATGAAGAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000636627.1
CDS-3UTR TCA 90 bp CTTCATATCACCCCCAAAATAATCACACCAAATGGCCAAAGGGCTTTCTTTATCGGACGTTGTCGAAGTTaGAATCACTGTTTTGCCAGA +
Preference number: 4 (lower is better)
Translates to: LHITPKIITPNGQRAFFIGRCRS*NHCFAR
Trigger: TCTGGCAAAACAGTGATTTCAACTTCGACAACGTCC...GATAAAGAAAGCCCTTTGGCCATTTGGTGTGATTATTTTGGGGGTGATATGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000636627.1
CDS-3UTR TCA 90 bp ACTGGCGTCACATCACAGAAAACCTTATTTATGAGGTCCCATTGCCCTCGCAATTTTTCTCCTTGTTCCTaGAATGTAACGATGACAAAG +
Preference number: 4 (lower is better)
Translates to: TGVTSQKTLFMRSHCPRNFSPCS*NVTMTK
Trigger: CTTTGTCATCGTTACATTTCAGGAACAAGGAGAAAA...ATTGCGAGGGCAATGGGACCTCATAAATAAGGTTTTCTGTGATGTGACGCCAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR TCA 90 bp ACTTACTTACTTACCAGAGGGTGGTTCAAGTCAAACAAACAAAACCAAAGACAGTGTCCATGGCATCATTaGACATCTTGGACTGCTCGT +
Preference number: 4 (lower is better)
Translates to: TYLLTRGWFKSNKQNQRQCPWHH*TSWTAR
Trigger: ACGAGCAGTCCAAGATGTTCAATGATGCCATGGACA...CTGTCTTTGGTTTTGTTTGTTTGACTTGAACCACCCTCTGGTAAGTAAGTAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR TCA 90 bp GCTGTTTCAGTAGAAATAAGCCCACTTGAGACTTTTCCCTTTCAAGGCCTTAGCAAAGACGGAAAAAGGTaGTGGAGATTCTATTGCTCT +
Preference number: 4 (lower is better)
Translates to: AVSVEISPLETFPFQGLSKDGKR*WRFYCS
Trigger: AGAGCAATAGAATCTCCATCACCTTTTTCCGTCTTT...GCTAAGGCCTTGAAAGGGAAAAGTCTCAAGTGGGCTTATTTCTACTGAAACAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000636938.1
ENST00000638120.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR TCA 90 bp GTTTCAGTAGAAATAAGCCCACTTGAGACTTTTCCCTTTCAAGGCCTTAGCCACAAAGACGGAAAAAGGTaGTGGAGATTCTATTGCTCT +
Preference number: 4 (lower is better)
Translates to: VSVEISPLETFPFQGLSHKDGKR*WRFYCS
Trigger: AGAGCAATAGAATCTCCATCACCTTTTTCCGTCTTT...GTGGCTAAGGCCTTGAAAGGGAAAAGTCTCAAGTGGGCTTATTTCTACTGAAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000636938.1
ENST00000638120.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR TCA 90 bp AAACCGACCATCGGAGTGATATTCTCTTATGTAAACTGGCGTCACATCACAGAAAATTCATCTAAATGGTaGGGCCCCAAAATAGACCAG +
Preference number: 4 (lower is better)
Translates to: KPTIGVIFSYVNWRHITENSSKW*GPKIDQ
Trigger: CTGGTCTATTTTGGGGCCTCACCATTTAGATGAATT...TTCTGTGATGTGACGCCAGTTTACATAAGAGAATATCACTCCGATGGTCGGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR TCA 90 bp ATGTCAGGAAAGAGTCATTTACAAACCTTGAAGTGTTTTTGCCTGGATCAGAGTGAGATTGGCATTTGTTaGGGTGGGAACTTGCTTTCC +
Preference number: 4 (lower is better)
Translates to: MSGKSHLQTLKCFCLDQSEIGIC*GGNLLS
Trigger: GGAAAGCAAGTTCCCACCTCAACAAATGCCAATCTC...ACTCTGATCCAGGCAAAAACACTTCAAGGTTTGTAAATGACTCTTTCCTGACAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR TCA 90 bp TTGGACCAAAATTGCTACCTATCATCTATCTTTTTGATTGCAGGGAATCCCTGCTGCTTGTGGGAAGAATaGTGCCCATTTTCAGACACA +
Preference number: 4 (lower is better)
Translates to: LDQNCYLSSIFLIAGNPCCLWEE*CPFSDT
Trigger: TGTGTCTGAAAATGGGCATCATTCTTCCCACAAGCA...GCAGGGATTCCCTGCAATCAAAAAGATAGATGATAGGTAGCAATTTTGGTCCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR TCA 90 bp AACAAACTAGTGTATCTAAGTTTACCTGGTTGCGAGTGCATTATTATTCCAGTTAGCAGTGGGGGTCCCTaGAATAGCCATGTATCTCTG +
Preference number: 4 (lower is better)
Translates to: NKLVYLSLPGCECIIIPVSSGGP*NSHVSL
Trigger: CAGAGATACATGGCTATTTCAGGGACCCCCACTGCT...AACTGGAATAATAATGCACTCGCAACCAGGTAAACTTAGATACACTAGTTTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR TCA 90 bp AACAAACTAGTGTATCTAAGTTTACCTGGTTGCGAGTGCATTATTATTCCAGTTGGCCGGCAACTGCCATaGTCTGTTGCTGCATTAGAT +
Preference number: 4 (lower is better)
Translates to: NKLVYLSLPGCECIIIPVGRQLP*SVAALD
Trigger: ATCTAATGCAGCAACAGATCATGGCAGTTGCCGGCC...AACTGGAATAATAATGCACTCGCAACCAGGTAAACTTAGATACACTAGTTTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR TCA 90 bp TTAAGATGTGAAAATGCAACCTGCAGGGTTACCTCTGTTGACATCTTTGTGCATCCACTTGGAATCAGCTaGGAATTCAAGATCAGACAC +
Preference number: 4 (lower is better)
Translates to: LRCENATCRVTSVDIFVHPLGIS*EFKIRH
Trigger: GTGTCTGATCTTGAATTCTCAGCTGATTCCAAGTGG...ATGCACAAAGATGTCAACAGAGGTAACCCTGCAGGTTGCATTTTCACATCTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636938.1
CDS-3UTR GCA 90 bp TGTAATTCACTTACTTACTTACCAGAGGGTGGTTCAAGTCAAACAAACAAAACCGCATCGATTGCAGCTTaGCAAGACAGGACAGTTTGC +
Preference number: 4 (lower is better)
Translates to: CNSLTYLPEGGSSQTNKTASIAA*QDRTVC
Trigger: GCAAACTGTCCTGTCTTGGCAAGCTGCAATCGATGC...GGTTTTGTTTGTTTGACTTGAACCACCCTCTGGTAAGTAAGTAAGTGAATTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR GCA 90 bp ACTTACTTACTTACCAGAGGGTGGTTCAAGTCAAACAAACAAAACCAAAGACAGCTGGAAATCTCCCCGTaGTTTTGCCTTCTCTCTTTC +
Preference number: 4 (lower is better)
Translates to: TYLLTRGWFKSNKQNQRQLEISP*FCLLSF
Trigger: GAAAGAGAGAAGGCAAAAGCACGGGGAGATTTCCAG...CTGTCTTTGGTTTTGTTTGTTTGACTTGAACCACCCTCTGGTAAGTAAGTAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR GCA 90 bp AATGTTCTTCATATCACCCCCAAAATAATCACACCAAATGGCCAAAGGGCTTTCAAGAGAGACGAAATATaGTTGGAGGCCCAAGCTGTA +
Preference number: 4 (lower is better)
Translates to: NVLHITPKIITPNGQRAFKRDEI*LEAQAV
Trigger: TACAGCTTGGGCCTCCAAGCATATTTCGTCTCTCTT...GAAAGCCCTTTGGCCATTTGGTGTGATTATTTTGGGGGTGATATGAAGAACATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636627.1
CDS-3UTR GCA 90 bp TGCAAACACTCTCTGGACTTTCTGGAGACACTAGCATTAAAACCAAAGCACTGGGTGCTCCGCTTGGTTTaGGTTTCATCAAAATTAAAC +
Preference number: 4 (lower is better)
Translates to: CKHSLDFLETLALKPKHWVLRLV*VSSKLN
Trigger: GTTTAATTTTGATGAAACGCAAACCAAGCGGAGCAC...CCAGTGCTTTGGTTTTAATGCTAGTGTCTCCAGAAAGTCCAGAGAGTGTTTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636627.1
CDS-3UTR GCA 90 bp CACCAAATGGCCAAAGGGCTTTCTTTATCAGTTGGCCTTAATGCTCTAAATGATGGAAATTGTCAAAGGTaGTCCGCTTGGTTTGCGTTT +
Preference number: 4 (lower is better)
Translates to: HQMAKGLSLSVGLNALNDGNCQR*SAWFAF
Trigger: AAACGCAAACCAAGCGGAGCACCTTTGACAATTTCC...ATCATTTAGAGCATTAAGGCCAACTGATAAAGAAAGCCCTTTGGCCATTTGGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636627.1
CDS-3UTR GCA 90 bp TATCCAAAAGTGGGTTTTCATCAGGACGTACAGTCAGAGTGTGAGTGCATTCTATCAGGCTCGTCATCTTaGAAATCACACGATATAGCA +
Preference number: 4 (lower is better)
Translates to: YPKVGFHQDVQSECECILSGSSS*KSHDIA
Trigger: TGCTATATCGTGTGATTTGCAAGATGACGAGCCTGA...TAGAATGCACTCACACTCTGACTGTACGTCCTGATGAAAACCCACTTTTGGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR GCA 90 bp ACTTACTTACTTACCAGAGGGTGGTTCAAGTCAAACAAACAAAACCAAAGACAGACACACCGAATTTCCTaGTGGAGGAAACAGCGGTTT +
Preference number: 4 (lower is better)
Translates to: TYLLTRGWFKSNKQNQRQTHRIS*WRKQRF
Trigger: AAACCGCTGTTTCCTCCAGCAGGAAATTCGGTGTGT...CTGTCTTTGGTTTTGTTTGTTTGACTTGAACCACCCTCTGGTAAGTAAGTAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR GCA 90 bp TATCCAAAAGTGGGTTTTCATCAGGACGTACAGTCAGAGTGTGAGTGCATTCTAGTTGAGGTGGGAACTTaGTTTCCTATGGAATTATGG +
Preference number: 4 (lower is better)
Translates to: YPKVGFHQDVQSECECILVEVGT*FPMELW
Trigger: CCATAATTCCATAGGAAAGCAAGTTCCCACCTCAAC...TAGAATGCACTCACACTCTGACTGTACGTCCTGATGAAAACCCACTTTTGGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR GCA 90 bp ACTGGCGTCACATCACAGAAAACCTTATTTATGAGGTCCCATTGCCCTCGCAATACCCATGGATATTGCTaGAGTTCAAATACAATACAG +
Preference number: 4 (lower is better)
Translates to: TGVTSQKTLFMRSHCPRNTHGYC*SSNTIQ
Trigger: CTGTATTGTATTTGAACTGCAGCAATATCCATGGGT...ATTGCGAGGGCAATGGGACCTCATAAATAAGGTTTTCTGTGATGTGACGCCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR GCA 90 bp TGCAAACACTCTCTGGACTTTCTGGAGACACTAGCATTAAAACCAAAGCACTGGCAAAAAGAAAATCCCTaGTCCAGCCATGTGAGTTTT +
Preference number: 4 (lower is better)
Translates to: CKHSLDFLETLALKPKHWQKENP*SSHVSF
Trigger: AAAACTCACATGGCTGGAGCAGGGATTTTCTTTTTG...CCAGTGCTTTGGTTTTAATGCTAGTGTCTCCAGAAAGTCCAGAGAGTGTTTGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000636627.1
CDS-3UTR CCA 90 bp TTAAGATGTGAAAATGCAACCTGCAGGGTTACCTCTGTTGACATCTTTGTGCATAACAAAATACACCCATaGCCATTCCCATCCTATCGC +
Preference number: 4 (lower is better)
Translates to: LRCENATCRVTSVDIFVHNKIHP*PFPSYR
Trigger: GCGATAGGATGGGAATGGCCATGGGTGTATTTTGTT...ATGCACAAAGATGTCAACAGAGGTAACCCTGCAGGTTGCATTTTCACATCTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636938.1
CDS-3UTR CCA 90 bp AATGTTCTTCATATCACCCCCAAAATAATCACACCAAATGGCCAAAGGGCTTTCCTGTGTCAACCAATCTaGCTGATTGTAGTGCTCAGA +
Preference number: 4 (lower is better)
Translates to: NVLHITPKIITPNGQRAFLCQPI*LIVVLR
Trigger: TCTGAGCACTACAATCAGCCAGATTGGTTGACACAG...GAAAGCCCTTTGGCCATTTGGTGTGATTATTTTGGGGGTGATATGAAGAACATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636627.1
CDS-3UTR CCA 90 bp AAGGGAAAACTGTTAAGCTTTGTACGTTCCCTTTCACGAAAAAGAACCACCGTGTCACTGTTGGCTATCTaGTTGACTTCTGGTTTGTTG +
Preference number: 4 (lower is better)
Translates to: KGKLLSFVRSLSRKRTTVSLLAI*LTSGLL
Trigger: CAACAAACCAGAAGTCAACCAGATAGCCAACAGTGA...CACGGTGGTTCTTTTTCGTGAAAGGGAACGTACAAAGCTTAACAGTTTTCCCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR CCA 90 bp ACTTACTTACTTACCAGAGGGTGGTTCAAGTCAAACAAACAAAACCAAAGACAGCTCCATTCGAGTCGATaGCTTTATACAGCAACGCAG +
Preference number: 4 (lower is better)
Translates to: TYLLTRGWFKSNKQNQRQLHSSR*LYTATQ
Trigger: CTGCGTTGCTGTATAAAGCCATCGACTCGAATGGAG...CTGTCTTTGGTTTTGTTTGTTTGACTTGAACCACCCTCTGGTAAGTAAGTAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR CCA 90 bp GACAGTTGCAACCCATGGTGGATCCAAAGGTACAGTATCAAAATCATGGAACTCGGTTGTTATCTCTCATaGCAACTTTCCCAAACATCT +
Preference number: 4 (lower is better)
Translates to: DSCNPWWIQRYSIKIMELGCYLS*QLSQTS
Trigger: AGATGTTTGGGAAAGTTGCCATGAGAGATAACAACC...GAGTTCCATGATTTTGATACTGTACCTTTGGATCCACCATGGGTTGCAACTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR CCA 90 bp TGCAAACACTCTCTGGACTTTCTGGAGACACTAGCATTAAAACCAAAGCACTGGGGTTGTTATCTCTCATaGCAACTTTCCCAAACATCT +
Preference number: 4 (lower is better)
Translates to: CKHSLDFLETLALKPKHWGCYLS*QLSQTS
Trigger: AGATGTTTGGGAAAGTTGCCATGAGAGATAACAACC...CCAGTGCTTTGGTTTTAATGCTAGTGTCTCCAGAAAGTCCAGAGAGTGTTTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636627.1
CDS-3UTR CCA 90 bp GCTGTTTCAGTAGAAATAAGCCCACTTGAGACTTTTCCCTTTCAAGGCCTTAGCGGTTGTTATCTCTCATaGCAACTTTCCCAAACATCT +
Preference number: 4 (lower is better)
Translates to: AVSVEISPLETFPFQGLSGCYLS*QLSQTS
Trigger: AGATGTTTGGGAAAGTTGCCATGAGAGATAACAACC...GCTAAGGCCTTGAAAGGGAAAAGTCTCAAGTGGGCTTATTTCTACTGAAACAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000636938.1
ENST00000638120.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CCA 90 bp CCTCTCCTTTGTCTGGAATGTTCTTCATATCACCCCCAAAATAATCACACCAAAGCCTGGGGAAACGTCTaGAAGTTATTGTTCCTATTG +
Preference number: 4 (lower is better)
Translates to: PLLCLECSSYHPQNNHTKAWGNV*KLLFLL
Trigger: CAATAGGAACAATAACTTCCAGACGTTTCCCCAGGC...TTTGGTGTGATTATTTTGGGGGTGATATGAAGAACATTCCAGACAAAGGAGAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000636627.1
CDS-3UTR CCA 90 bp GTGCATTCTAATGAAAACTTCAGCCCTCATTCAATTGCATATAAAAGCCCTCAACTCATCATCACCAGCTaGAGGGACAACTTGGTCAAG +
Preference number: 4 (lower is better)
Translates to: VHSNENFSPHSIAYKSPQLIITS*RDNLVK
Trigger: CTTGACCAAGTTGTCCCTCCAGCTGGTGATGATGAG...TTGAGGGCTTTTATATGCAATTGAATGAGGGCTGAAGTTTTCATTAGAATGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR CCA 90 bp GTGCATTCTAATGAAAACTTCAGCCCTCATTCAATTGCATATAAAAGCCCTCAACCTGTAGGGCAATTGTaGTGTTCTTCGCAGGGTACT +
Preference number: 4 (lower is better)
Translates to: VHSNENFSPHSIAYKSPQPVGQL*CSSQGT
Trigger: AGTACCCTGCGAAGAACACCACAATTGCCCTACAGG...TTGAGGGCTTTTATATGCAATTGAATGAGGGCTGAAGTTTTCATTAGAATGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR CCA 90 bp AACAAACTAGTGTATCTAAGTTTACCTGGTTGCGAGTGCATTATTATTCCAGTTCTGGGCCGCTTTCCATaGGCAGCTTTGGACATATTG +
Preference number: 4 (lower is better)
Translates to: NKLVYLSLPGCECIIIPVLGRFP*AALDIL
Trigger: CAATATGTCCAAAGCTGCCCATGGAAAGCGGCCCAG...AACTGGAATAATAATGCACTCGCAACCAGGTAAACTTAGATACACTAGTTTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CCA 90 bp TTGGACCAAAATTGCTACCTATCATCTATCTTTTTGATTGCAGGGAATCCCTGCATAGCCATGTATCTCTaGGTCTTCCCGGCAAATAGT +
Preference number: 4 (lower is better)
Translates to: LDQNCYLSSIFLIAGNPCIAMYL*VFPANS
Trigger: ACTATTTGCCGGGAAGACCCAGAGATACATGGCTAT...GCAGGGATTCCCTGCAATCAAAAAGATAGATGATAGGTAGCAATTTTGGTCCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR CCA 90 bp TATTTCAGAACAGCTAAACAGGAACCAGGACGCAGTGTATTTGGGGGAAAGGGTCTAATTATCCAAAAGTaGGTTTTCATCAGGACGTAC +
Preference number: 4 (lower is better)
Translates to: YFRTAKQEPGRSVFGGKGLIIQK*VFIRTY
Trigger: GTACGTCCTGATGAAAACCCACTTTTGGATAATTAG...ACCCTTTCCCCCAAATACACTGCGTCCTGGTTCCTGTTTAGCTGTTCTGAAATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR CCA 90 bp CACTCTCTGGACTTTCTGGAGACACTAGCATTAAAACCAAAGCACTGGCCAAGGAATAATCACACCAAATaGCCAAAGGGCTTTCTTTAT +
Preference number: 4 (lower is better)
Translates to: HSLDFLETLALKPKHWPRNNHTK*PKGFLY
Trigger: ATAAAGAAAGCCCTTTGGCCATTTGGTGTGATTATT...CCTTGGCCAGTGCTTTGGTTTTAATGCTAGTGTCTCCAGAAAGTCCAGAGAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636627.1
CDS-3UTR CCA 90 bp CCCCAAAATAATCACACCAAATGGCCAAAGGGCTTTCTTTATCAGTTGGCCTTAAGCCTCTCCTTTGTCTaGAATGTTCTTCATATCACC +
Preference number: 4 (lower is better)
Translates to: PQNNHTKWPKGFLYQLALSLSFV*NVLHIT
Trigger: GGTGATATGAAGAACATTCCAGACAAAGGAGAGGCT...TAAGGCCAACTGATAAAGAAAGCCCTTTGGCCATTTGGTGTGATTATTTTGGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636627.1
CDS-3UTR CCA 90 bp TTTCCTGTGGACACGTTAAGATGGAACCTGAGGTGTTGCCTGGATTGGTTTTGGAATTTTCCTTCTCAATaGGTAAGTATGGTACAGAAC +
Preference number: 4 (lower is better)
Translates to: FPVDTLRWNLRCCLDWFWNFPSQ*VSMVQN
Trigger: GTTCTGTACCATACTTACCCATTGAGAAGGAAAATT...CCAAAACCAATCCAGGCAACACCTCAGGTTCCATCTTAACGTGTCCACAGGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636938.1
CDS-3UTR TCA 90 bp TGTAATTCACTTACTTACTTACCAGAGGGTGGTTCAAGTCAAACAAACAAAACCCTCTTGGCGTATTGCTaGCGTTTTCTTTGGGAGAGA +
Preference number: 4 (lower is better)
Translates to: CNSLTYLPEGGSSQTNKTLLAYC*RFLWER
Trigger: TCTCTCCCAAAGAAAACGTCAGCAATACGCCAAGAG...GGTTTTGTTTGTTTGACTTGAACCACCCTCTGGTAAGTAAGTAAGTGAATTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR TCA 90 bp GAATGTTCTTCATATCACCCCCAAAATAATCACACCAAATGGCCAAAGGGCTTTGTTAAGGACGAAAAATaGGCCAAGGATGATCAGACT +
Preference number: 4 (lower is better)
Translates to: ECSSYHPQNNHTKWPKGFVKDEK*AKDDQT
Trigger: AGTCTGATCATCCTTGGCTCATTTTTCGTCCTTAAC...AAAGCCCTTTGGCCATTTGGTGTGATTATTTTGGGGGTGATATGAAGAACATTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000636627.1
CDS-3UTR TCA 90 bp TTGCAAACACTCTCTGGACTTTCTGGAGACACTAGCATTAAAACCAAAGCACTGAGCAATCAAACCGGTTaGAAAGAGAGACGAAATATG +
Preference number: 4 (lower is better)
Translates to: LQTLSGLSGDTSIKTKALSNQTG*KERRNM
Trigger: CATATTTCGTCTCTCTTTTCAACCGGTTTGATTGCT...CAGTGCTTTGGTTTTAATGCTAGTGTCTCCAGAAAGTCCAGAGAGTGTTTGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636627.1
CDS-3UTR TCA 90 bp TGTTCTTCATATCACCCCCAAAATAATCACACCAAATGGCCAAAGGGCTTTCTTTGTTGGCTATCTGGTTaGCTTCTGGTTTGTTGTTCT +
Preference number: 4 (lower is better)
Translates to: CSSYHPQNNHTKWPKGFLCWLSG*LLVCCS
Trigger: AGAACAACAAACCAGAAGTCAACCAGATAGCCAACA...AAGAAAGCCCTTTGGCCATTTGGTGTGATTATTTTGGGGGTGATATGAAGAACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636627.1
CDS-3UTR TCA 90 bp ATTCAAGATCAGACACCCTTATCGACCAACATCTTGGGCAAAAATCTGCTATTCTGTTGGCTATCTGGTTaGCTTCTGGTTTGTTGTTCT +
Preference number: 4 (lower is better)
Translates to: IQDQTPLSTNILGKNLLFCWLSG*LLVCCS
Trigger: AGAACAACAAACCAGAAGTCAACCAGATAGCCAACA...GAATAGCAGATTTTTGCCCAAGATGTTGGTCGATAAGGGTGTCTGATCTTGAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636938.1
CDS-3UTR TCA 90 bp GTTCTTCATATCACCCCCAAAATAATCACACCAAATGGCCAAAGGGCTTTCTTTAATTCATCTAAATGGTaGGGCCCCAAAATAGACCAG +
Preference number: 4 (lower is better)
Translates to: VLHITPKIITPNGQRAFFNSSKW*GPKIDQ
Trigger: CTGGTCTATTTTGGGGCCTCACCATTTAGATGAATT...AAAGAAAGCCCTTTGGCCATTTGGTGTGATTATTTTGGGGGTGATATGAAGAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000636627.1
CDS-3UTR TCA 90 bp AACAAACTAGTGTATCTAAGTTTACCTGGTTGCGAGTGCATTATTATTCCAGTTGGGGCTACAAGGTGGTaGTGCATATCATTTCATCCG +
Preference number: 4 (lower is better)
Translates to: NKLVYLSLPGCECIIIPVGATRW*CISFHP
Trigger: CGGATGAAATGATATGCATCACCACCTTGTAGCCCC...AACTGGAATAATAATGCACTCGCAACCAGGTAAACTTAGATACACTAGTTTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR TCA 90 bp TTGGACCAAAATTGCTACCTATCATCTATCTTTTTGATTGCAGGGAATCCCTGCCCAGAGGATTTTCGCTaGATAAATGAGAATTGGCTC +
Preference number: 4 (lower is better)
Translates to: LDQNCYLSSIFLIAGNPCPEDFR*INENWL
Trigger: GAGCCAATTCTCATTTATTCAGCGAAAATCCTCTGG...GCAGGGATTCCCTGCAATCAAAAAGATAGATGATAGGTAGCAATTTTGGTCCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR TCA 90 bp AAACCGACCATCGGAGTGATATTCTCTTATGTAAACTGGCGTCACATCACAGAATCTGTTGACAGAAAATaGAGCCTTGACGGTTCTAAT +
Preference number: 4 (lower is better)
Translates to: KPTIGVIFSYVNWRHITESVDRK*SLDGSN
Trigger: ATTAGAACCGTCAAGGCTTCATTTTCTGTCAACAGA...TTCTGTGATGTGACGCCAGTTTACATAAGAGAATATCACTCCGATGGTCGGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR GCA 90 bp AAGGGAAAACTGTTAAGCTTTGTACGTTCCCTTTCACGAAAAAGAACCACCGTGGTGCTCCGCTTGGTTTaGGTTTCATCAAAATTAAAC +
Preference number: 4 (lower is better)
Translates to: KGKLLSFVRSLSRKRTTVVLRLV*VSSKLN
Trigger: GTTTAATTTTGATGAAACGCAAACCAAGCGGAGCAC...CACGGTGGTTCTTTTTCGTGAAAGGGAACGTACAAAGCTTAACAGTTTTCCCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR GCA 90 bp TCACTGAAGCCTCTCCTTTGTCTGGAATGTTCTTCATATCACCCCCAAAATAATAGACAATGGCAAAGTTaGTCCCACATGTATACTCCT +
Preference number: 4 (lower is better)
Translates to: SLKPLLCLECSSYHPQNNRQWQS*SHMYTP
Trigger: AGGAGTATACATGTGGGAGCAACTTTGCCATTGTCT...ATTATTTTGGGGGTGATATGAAGAACATTCCAGACAAAGGAGAGGCTTCAGTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636627.1
CDS-3UTR GCA 90 bp ATTCAAGATCAGACACCCTTATCGACCAACATCTTGGGCAAAAATCTGCTATTCAGACAATGGCAAAGTTaGTCCCACATGTATACTCCT +
Preference number: 4 (lower is better)
Translates to: IQDQTPLSTNILGKNLLFRQWQS*SHMYTP
Trigger: AGGAGTATACATGTGGGAGCAACTTTGCCATTGTCT...GAATAGCAGATTTTTGCCCAAGATGTTGGTCGATAAGGGTGTCTGATCTTGAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636938.1
CDS-3UTR GCA 90 bp ATGTCAGGAAAGAGTCATTTACAAACCTTGAAGTGTTTTTGCCTGGATCAGAGTCCATTTTCAGACACATaGTCAAGGTTCCCAATGCTG +
Preference number: 4 (lower is better)
Translates to: MSGKSHLQTLKCFCLDQSPFSDT*SRFPML
Trigger: CAGCATTGGGAACCTTGAGCATGTGTCTGAAAATGG...ACTCTGATCCAGGCAAAAACACTTCAAGGTTTGTAAATGACTCTTTCCTGACAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR GCA 90 bp GACAGTTGCAACCCATGGTGGATCCAAAGGTACAGTATCAAAATCATGGAACTCTTACCTGGTTGCGAGTaGATTATTATTCCAGTTTAC +
Preference number: 4 (lower is better)
Translates to: DSCNPWWIQRYSIKIMELLPGCE*IIIPVY
Trigger: GTAAACTGGAATAATAATGCACTCGCAACCAGGTAA...GAGTTCCATGATTTTGATACTGTACCTTTGGATCCACCATGGGTTGCAACTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR GCA 90 bp GTTTCAGTAGAAATAAGCCCACTTGAGACTTTTCCCTTTCAAGGCCTTAGCCACGTGCTTAGGCTTAAATaGGATGACTTTCAAAACCAT +
Preference number: 4 (lower is better)
Translates to: VSVEISPLETFPFQGLSHVLRLK*DDFQNH
Trigger: ATGGTTTTGAAAGTCATCGCATTTAAGCCTAAGCAC...GTGGCTAAGGCCTTGAAAGGGAAAAGTCTCAAGTGGGCTTATTTCTACTGAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CCA 90 bp AACAAACTAGTGTATCTAAGTTTACCTGGTTGCGAGTGCATTATTATTCCAGTTGATTTGCCGCTTGAGTaGTTCCCGCCTTCTGTTTCT +
Preference number: 4 (lower is better)
Translates to: NKLVYLSLPGCECIIIPVDLPLE*FPPSVS
Trigger: AGAAACAGAAGGCGGGAACCACTCAAGCGGCAAATC...AACTGGAATAATAATGCACTCGCAACCAGGTAAACTTAGATACACTAGTTTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CCA 90 bp AAGGGAAAACTGTTAAGCTTTGTACGTTCCCTTTCACGAAAAAGAACCACCGTGAGTGCTCAGAGGAAATaGTTAAGGTGTTCAGAAACA +
Preference number: 4 (lower is better)
Translates to: KGKLLSFVRSLSRKRTTVSAQRK*LRCSET
Trigger: TGTTTCTGAACACCTTAACCATTTCCTCTGAGCACT...CACGGTGGTTCTTTTTCGTGAAAGGGAACGTACAAAGCTTAACAGTTTTCCCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR CCA 90 bp AGTGGGGAACTACAATTATTAGGACCCATGGATATTGCTGCAGTTCAAATACAACTGTGTCAACCAATCTaGCTGATTGTAGTGCTCAGA +
Preference number: 4 (lower is better)
Translates to: SGELQLLGPMDIAAVQIQLCQPI*LIVVLR
Trigger: TCTGAGCACTACAATCAGCCAGATTGGTTGACACAG...TTGTATTTGAACTGCAGCAATATCCATGGGTCCTAATAATTGTAGTTCCCCACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR CCA 90 bp CCCCAAAATAATCACACCAAATGGCCAAAGGGCTTTCTTTATCAGTTGGCCTTAAAGCGATGGACTTCATaGAGTTTAATAAGGATGCCA +
Preference number: 4 (lower is better)
Translates to: PQNNHTKWPKGFLYQLALKRWTS*SLIRMP
Trigger: TGGCATCCTTATTAAACTCCATGAAGTCCATCGCTT...TAAGGCCAACTGATAAAGAAAGCCCTTTGGCCATTTGGTGTGATTATTTTGGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636627.1
CDS-3UTR CCA 90 bp CTTCATATCACCCCCAAAATAATCACACCAAATGGCCAAAGGGCTTTCTTTATCGCAACAGCGAAGCGATaGACTTCATGGAGTTTAATA +
Preference number: 4 (lower is better)
Translates to: LHITPKIITPNGQRAFFIATAKR*TSWSLI
Trigger: TATTAAACTCCATGAAGTCCATCGCTTCGCTGTTGC...GATAAAGAAAGCCCTTTGGCCATTTGGTGTGATTATTTTGGGGGTGATATGAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636627.1
CDS-3UTR CCA 90 bp TATCACCCCCAAAATAATCACACCAAATGGCCAAAGGGCTTTCTTTATCAGTTGCAAAGGTGCTCCGCTTaGTTTGCGTTTCATCAAAAT +
Preference number: 4 (lower is better)
Translates to: YHPQNNHTKWPKGFLYQLQRCSA*FAFHQN
Trigger: ATTTTGATGAAACGCAAACCAAGCGGAGCACCTTTG...CAACTGATAAAGAAAGCCCTTTGGCCATTTGGTGTGATTATTTTGGGGGTGATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000636627.1
CDS-3UTR CCA 90 bp CTTCATATCACCCCCAAAATAATCACACCAAATGGCCAAAGGGCTTTCTTTATCCTAGGCTCTCTTTTCTaGCAATCTTTTTCCTCTCCT +
Preference number: 4 (lower is better)
Translates to: LHITPKIITPNGQRAFFILGSLF*QSFSSP
Trigger: AGGAGAGGAAAAAGATTGCCAGAAAAGAGAGCCTAG...GATAAAGAAAGCCCTTTGGCCATTTGGTGTGATTATTTTGGGGGTGATATGAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000636627.1
CDS-3UTR CCA 90 bp AATGTTCTTCATATCACCCCCAAAATAATCACACCAAATGGCCAAAGGGCTTTCTCACTGTTGGCTATCTaGTTGACTTCTGGTTTGTTG +
Preference number: 4 (lower is better)
Translates to: NVLHITPKIITPNGQRAFSLLAI*LTSGLL
Trigger: CAACAAACCAGAAGTCAACCAGATAGCCAACAGTGA...GAAAGCCCTTTGGCCATTTGGTGTGATTATTTTGGGGGTGATATGAAGAACATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636627.1
CDS-3UTR CCA 90 bp ATCATGGAACTCTTGCCCAAAGAAAAGACTGCAAATAGTCATCTGGTATATCTTAGGTTGGTGAAGATGTaGTGGTTGATGAGCTTGTGG +
Preference number: 4 (lower is better)
Translates to: IMELLPKEKTANSHLVYLRLVKM*WLMSLW
Trigger: CCACAAGCTCATCAACCACCACATCTTCACCAACCT...AAGATATACCAGATGACTATTTGCAGTCTTTTCTTTGGGCAAGAGTTCCATGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR CCA 90 bp AACAAACTAGTGTATCTAAGTTTACCTGGTTGCGAGTGCATTATTATTCCAGTTTTCCCCTTGAACAACTaGACCCCGATACAGGCAAAC +
Preference number: 4 (lower is better)
Translates to: NKLVYLSLPGCECIIIPVFPLNN*TPIQAN
Trigger: GTTTGCCTGTATCGGGGTCCAGTTGTTCAAGGGGAA...AACTGGAATAATAATGCACTCGCAACCAGGTAAACTTAGATACACTAGTTTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CCA 90 bp CAAATGGCCAAAGGGCTTTCTTTATCAGTTGGCCTTAATGCTCTAAATGATACACTTCAGGGTTACTTTTaGCTTCATCCGTACAGCGAT +
Preference number: 4 (lower is better)
Translates to: QMAKGLSLSVGLNALNDTLQGYF*LHPYSD
Trigger: ATCGCTGTACGGATGAAGCCAAAAGTAACCCTGAAG...TGTATCATTTAGAGCATTAAGGCCAACTGATAAAGAAAGCCCTTTGGCCATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636627.1
CDS-3UTR CCA 90 bp AACAAACTAGTGTATCTAAGTTTACCTGGTTGCGAGTGCATTATTATTCCAGTTGTCGATGTTTCTGCCTaGGTATCTGCTGTAGTAGCC +
Preference number: 4 (lower is better)
Translates to: NKLVYLSLPGCECIIIPVVDVSA*VSAVVA
Trigger: GGCTACTACAGCAGATACCCAGGCAGAAACATCGAC...AACTGGAATAATAATGCACTCGCAACCAGGTAAACTTAGATACACTAGTTTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CCA 90 bp ATGTCAGGAAAGAGTCATTTACAAACCTTGAAGTGTTTTTGCCTGGATCAGAGTCTCGGTGAGTACTTCTaGGCTTTACTTGAATCTAGG +
Preference number: 4 (lower is better)
Translates to: MSGKSHLQTLKCFCLDQSLGEYF*ALLESR
Trigger: CCTAGATTCAAGTAAAGCCCAGAAGTACTCACCGAG...ACTCTGATCCAGGCAAAAACACTTCAAGGTTTGTAAATGACTCTTTCCTGACAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR CCA 90 bp GACTTACTTACACACCGTATTTCAGAACAGCTAAACAGGAACCAGGACGCAGTGGTATCTAAGTTTACCTaGTTGCGAGTGCATTATTAT +
Preference number: 4 (lower is better)
Translates to: DLLTHRISEQLNRNQDAVVSKFT*LRVHYY
Trigger: ATAATAATGCACTCGCAACCAGGTAAACTTAGATAC...CACTGCGTCCTGGTTCCTGTTTAGCTGTTCTGAAATACGGTGTGTAAGTAAGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CCA 90 bp GTGCATTCTAATGAAAACTTCAGCCCTCATTCAATTGCATATAAAAGCCCTCAACTGGTCTGGCAATTTTaGCCTGATGTGATGCCACAA +
Preference number: 4 (lower is better)
Translates to: VHSNENFSPHSIAYKSPQLVWQF*PDVMPQ
Trigger: TTGTGGCATCACATCAGGCCAAAATTGCCAGACCAG...TTGAGGGCTTTTATATGCAATTGAATGAGGGCTGAAGTTTTCATTAGAATGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR CCA 90 bp ATTCAAGATCAGACACCCTTATCGACCAACATCTTGGGCAAAAATCTGCTATTCACTCCAACCACCACTTaGAATCAGCTGAGAATTCAA +
Preference number: 4 (lower is better)
Translates to: IQDQTPLSTNILGKNLLFTPTTT*NQLRIQ
Trigger: TTGAATTCTCAGCTGATTCCAAGTGGTGGTTGGAGT...GAATAGCAGATTTTTGCCCAAGATGTTGGTCGATAAGGGTGTCTGATCTTGAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636938.1
CDS-3UTR TCA 90 bp GAATGTTCTTCATATCACCCCCAAAATAATCACACCAAATGGCCAAAGGGCTTTAAAGACGGAAAAAGGTaGTGGAGATTCTATTGCTCT +
Preference number: 4 (lower is better)
Translates to: ECSSYHPQNNHTKWPKGFKDGKR*WRFYCS
Trigger: AGAGCAATAGAATCTCCATCACCTTTTTCCGTCTTT...AAAGCCCTTTGGCCATTTGGTGTGATTATTTTGGGGGTGATATGAAGAACATTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000636627.1
CDS-3UTR TCA 90 bp ATCATGGAACTCTTGCCCAAAGAAAAGACTGCAAATAGTCATCTGGTATATCTTAGAAAACCTTATTTATaGGGTCCCATTGCCCTCGCA +
Preference number: 4 (lower is better)
Translates to: IMELLPKEKTANSHLVYLRKPYL*GPIALA
Trigger: TGCGAGGGCAATGGGACCTCATAAATAAGGTTTTCT...AAGATATACCAGATGACTATTTGCAGTCTTTTCTTTGGGCAAGAGTTCCATGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR GCA 90 bp TTGGACCAAAATTGCTACCTATCATCTATCTTTTTGATTGCAGGGAATCCCTGCGAACACTGTGAGAAGTaGTTGAGGGAAATTGTCAAA +
Preference number: 4 (lower is better)
Translates to: LDQNCYLSSIFLIAGNPCEHCEK*LREIVK
Trigger: TTTGACAATTTCCCTCAAGCACTTCTCACAGTGTTC...GCAGGGATTCCCTGCAATCAAAAAGATAGATGATAGGTAGCAATTTTGGTCCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR GCA 90 bp AAACCGACCATCGGAGTGATATTCTCTTATGTAAACTGGCGTCACATCACAGAATTACCTGGTTGCGAGTaGATTATTATTCCAGTTTAC +
Preference number: 4 (lower is better)
Translates to: KPTIGVIFSYVNWRHITELPGCE*IIIPVY
Trigger: GTAAACTGGAATAATAATGCACTCGCAACCAGGTAA...TTCTGTGATGTGACGCCAGTTTACATAAGAGAATATCACTCCGATGGTCGGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR GCA 90 bp TATCCAAAAGTGGGTTTTCATCAGGACGTACAGTCAGAGTGTGAGTGCATTCTACAGTCAGAGTGTGAGTaGATTCTAATGAAAACTTCA +
Preference number: 4 (lower is better)
Translates to: YPKVGFHQDVQSECECILQSECE*ILMKTS
Trigger: TGAAGTTTTCATTAGAATGCACTCACACTCTGACTG...TAGAATGCACTCACACTCTGACTGTACGTCCTGATGAAAACCCACTTTTGGATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR GCA 90 bp AAACCGACCATCGGAGTGATATTCTCTTATGTAAACTGGCGTCACATCACAGAAACCTTGAAGTGTTTTTaGCTGGATCAGAGTAAGAAT +
Preference number: 4 (lower is better)
Translates to: KPTIGVIFSYVNWRHITETLKCF*LDQSKN
Trigger: ATTCTTACTCTGATCCAGGCAAAAACACTTCAAGGT...TTCTGTGATGTGACGCCAGTTTACATAAGAGAATATCACTCCGATGGTCGGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR CCA 90 bp GTGCATTCTAATGAAAACTTCAGCCCTCATTCAATTGCATATAAAAGCCCTCAACAGAAAGAGGAAGTCTaGTGCCTCTTGCATAGTTTG +
Preference number: 4 (lower is better)
Translates to: VHSNENFSPHSIAYKSPQQKEEV*CLLHSL
Trigger: CAAACTATGCAAGAGGCACCAGACTTCCTCTTTCTG...TTGAGGGCTTTTATATGCAATTGAATGAGGGCTGAAGTTTTCATTAGAATGCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR CCA 90 bp TTGGACCAAAATTGCTACCTATCATCTATCTTTTTGATTGCAGGGAATCCCTGCAGTGCTCAGAGGAAATaGTTAAGGTGTTCAGAAACA +
Preference number: 4 (lower is better)
Translates to: LDQNCYLSSIFLIAGNPCSAQRK*LRCSET
Trigger: TGTTTCTGAACACCTTAACCATTTCCTCTGAGCACT...GCAGGGATTCCCTGCAATCAAAAAGATAGATGATAGGTAGCAATTTTGGTCCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR CCA 90 bp ATTCAAGATCAGACACCCTTATCGACCAACATCTTGGGCAAAAATCTGCTATTCCCAAGAGGACTTTGTTaGCAATATCTTGAATCTGTG +
Preference number: 4 (lower is better)
Translates to: IQDQTPLSTNILGKNLLFPRGLC*QYLESV
Trigger: CACAGATTCAAGATATTGCCAACAAAGTCCTCTTGG...GAATAGCAGATTTTTGCCCAAGATGTTGGTCGATAAGGGTGTCTGATCTTGAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636938.1
CDS-3UTR CCA 90 bp TGTAATTCACTTACTTACTTACCAGAGGGTGGTTCAAGTCAAACAAACAAAACCTCTTCACAACGGAGATaGCACTGGATTGAATCCCAA +
Preference number: 4 (lower is better)
Translates to: CNSLTYLPEGGSSQTNKTSSQRR*HWIESQ
Trigger: TTGGGATTCAATCCAGTGCCATCTCCGTTGTGAAGA...GGTTTTGTTTGTTTGACTTGAACCACCCTCTGGTAAGTAAGTAAGTGAATTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR CCA 90 bp ATCATGGAACTCTTGCCCAAAGAAAAGACTGCAAATAGTCATCTGGTATATCTTTGGCATTTGTTGAGGTaGGAACTTGCTTTCCTATGG +
Preference number: 4 (lower is better)
Translates to: IMELLPKEKTANSHLVYLWHLLR*ELAFLW
Trigger: CCATAGGAAAGCAAGTTCCCACCTCAACAAATGCCA...AAGATATACCAGATGACTATTTGCAGTCTTTTCTTTGGGCAAGAGTTCCATGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR TCA 90 bp TGTAATTCACTTACTTACTTACCAGAGGGTGGTTCAAGTCAAACAAACAAAACCTGTTGGCTATCTGGTTaGCTTCTGGTTTGTTGTTCT +
Preference number: 4 (lower is better)
Translates to: CNSLTYLPEGGSSQTNKTCWLSG*LLVCCS
Trigger: AGAACAACAAACCAGAAGTCAACCAGATAGCCAACA...GGTTTTGTTTGTTTGACTTGAACCACCCTCTGGTAAGTAAGTAAGTGAATTACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR TCA 90 bp TATCACCCCCAAAATAATCACACCAAATGGCCAAAGGGCTTTCTTTATCAGTTGTTTTCTCCTTGTTCCTaGAATGTAACGATGACAAAG +
Preference number: 4 (lower is better)
Translates to: YHPQNNHTKWPKGFLYQLFSPCS*NVTMTK
Trigger: CTTTGTCATCGTTACATTTCAGGAACAAGGAGAAAA...CAACTGATAAAGAAAGCCCTTTGGCCATTTGGTGTGATTATTTTGGGGGTGATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000636627.1
CDS-3UTR TCA 90 bp ATTCAAGATCAGACACCCTTATCGACCAACATCTTGGGCAAAAATCTGCTATTCTTTTCTCCTTGTTCCTaGAATGTAACGATGACAAAG +
Preference number: 4 (lower is better)
Translates to: IQDQTPLSTNILGKNLLFFSPCS*NVTMTK
Trigger: CTTTGTCATCGTTACATTTCAGGAACAAGGAGAAAA...GAATAGCAGATTTTTGCCCAAGATGTTGGTCGATAAGGGTGTCTGATCTTGAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636938.1
CDS-3UTR TCA 90 bp ACTTACTTACTTACCAGAGGGTGGTTCAAGTCAAACAAACAAAACCAAAGACAGGGGCACCATTTCTTTTaGACACATCATCTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: TYLLTRGWFKSNKQNQRQGHHFF*THHLLL
Trigger: AAGAAGAAGATGATGTGTTCAAAAGAAATGGTGCCC...CTGTCTTTGGTTTTGTTTGTTTGACTTGAACCACCCTCTGGTAAGTAAGTAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR GCA 90 bp AGTGGGGAACTACAATTATTAGGACCCATGGATATTGCTGCAGTTCAAATACAACCCCTTAGGCTTAAATaGGATGACTTTCAAAACCAT +
Preference number: 4 (lower is better)
Translates to: SGELQLLGPMDIAAVQIQPLRLK*DDFQNH
Trigger: ATGGTTTTGAAAGTCATCGCATTTAAGCCTAAGGGG...TTGTATTTGAACTGCAGCAATATCCATGGGTCCTAATAATTGTAGTTCCCCACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR GCA 90 bp GTGCATTCTAATGAAAACTTCAGCCCTCATTCAATTGCATATAAAAGCCCTCAATTCTGCCTGGGTATCTaGTGTAGTAGCCATAGTTTT +
Preference number: 4 (lower is better)
Translates to: VHSNENFSPHSIAYKSPQFCLGI*CSSHSF
Trigger: AAAACTATGGCTACTACAGCAGATACCCAGGCAGAA...TTGAGGGCTTTTATATGCAATTGAATGAGGGCTGAAGTTTTCATTAGAATGCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR GCA 90 bp TATCACCCCCAAAATAATCACACCAAATGGCCAAAGGGCTTTCTTTATCAGTTGGTGCTTAGGCTTAAATaGGATGACTTTCAAAACCAT +
Preference number: 4 (lower is better)
Translates to: YHPQNNHTKWPKGFLYQLVLRLK*DDFQNH
Trigger: ATGGTTTTGAAAGTCATCGCATTTAAGCCTAAGCAC...CAACTGATAAAGAAAGCCCTTTGGCCATTTGGTGTGATTATTTTGGGGGTGATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000636627.1
CDS-3UTR CCA 90 bp AACAAACTAGTGTATCTAAGTTTACCTGGTTGCGAGTGCATTATTATTCCAGTTCAGAAAGAGGAAGTCTaGTGCCTCTTGCATAGTTTG +
Preference number: 4 (lower is better)
Translates to: NKLVYLSLPGCECIIIPVQKEEV*CLLHSL
Trigger: CAAACTATGCAAGAGGCACCAGACTTCCTCTTTCTG...AACTGGAATAATAATGCACTCGCAACCAGGTAAACTTAGATACACTAGTTTGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CCA 90 bp CAAATGGCCAAAGGGCTTTCTTTATCAGTTGGCCTTAATGCTCTAAATGATACAAGTGCTCAGAGGAAATaGTTAAGGTGTTCAGAAACA +
Preference number: 4 (lower is better)
Translates to: QMAKGLSLSVGLNALNDTSAQRK*LRCSET
Trigger: TGTTTCTGAACACCTTAACCATTTCCTCTGAGCACT...TGTATCATTTAGAGCATTAAGGCCAACTGATAAAGAAAGCCCTTTGGCCATTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636627.1
CDS-3UTR CCA 90 bp AGTGGGGAACTACAATTATTAGGACCCATGGATATTGCTGCAGTTCAAATACAACCAAGAGGACTTTGTTaGCAATATCTTGAATCTGTG +
Preference number: 4 (lower is better)
Translates to: SGELQLLGPMDIAAVQIQPRGLC*QYLESV
Trigger: CACAGATTCAAGATATTGCCAACAAAGTCCTCTTGG...TTGTATTTGAACTGCAGCAATATCCATGGGTCCTAATAATTGTAGTTCCCCACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR CCA 90 bp CAAATGGCCAAAGGGCTTTCTTTATCAGTTGGCCTTAATGCTCTAAATGATACACCAAGAGGACTTTGTTaGCAATATCTTGAATCTGTG +
Preference number: 4 (lower is better)
Translates to: QMAKGLSLSVGLNALNDTPRGLC*QYLESV
Trigger: CACAGATTCAAGATATTGCCAACAAAGTCCTCTTGG...TGTATCATTTAGAGCATTAAGGCCAACTGATAAAGAAAGCCCTTTGGCCATTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636627.1
CDS-3UTR CCA 90 bp AACAAACTAGTGTATCTAAGTTTACCTGGTTGCGAGTGCATTATTATTCCAGTTGAGACGAAATATGCTTaGAGGCCCAAGCTGTACATT +
Preference number: 4 (lower is better)
Translates to: NKLVYLSLPGCECIIIPVETKYA*RPKLYI
Trigger: AATGTACAGCTTGGGCCTCCAAGCATATTTCGTCTC...AACTGGAATAATAATGCACTCGCAACCAGGTAAACTTAGATACACTAGTTTGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CCA 90 bp AGTGGGGAACTACAATTATTAGGACCCATGGATATTGCTGCAGTTCAAATACAAAGGACGCAGTGTATTTaGGGGAAAGGGTTTAAAAAT +
Preference number: 4 (lower is better)
Translates to: SGELQLLGPMDIAAVQIQRTQCI*GKGFKN
Trigger: ATTTTTAAACCCTTTCCCCCAAATACACTGCGTCCT...TTGTATTTGAACTGCAGCAATATCCATGGGTCCTAATAATTGTAGTTCCCCACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR CCA 90 bp ACTTACTTACTTACCAGAGGGTGGTTCAAGTCAAACAAACAAAACCAAAGACAGATAATCACTGGTAGCTaGGTTCTGACTTACTTACAC +
Preference number: 4 (lower is better)
Translates to: TYLLTRGWFKSNKQNQRQIITGS*VLTYLH
Trigger: GTGTAAGTAAGTCAGAACCCAGCTACCAGTGATTAT...CTGTCTTTGGTTTTGTTTGTTTGACTTGAACCACCCTCTGGTAAGTAAGTAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR CCA 90 bp TATCCAAAAGTGGGTTTTCATCAGGACGTACAGTCAGAGTGTGAGTGCATTCTAGTATCTAAGTTTACCTaGTTGCGAGTGCATTATTAT +
Preference number: 4 (lower is better)
Translates to: YPKVGFHQDVQSECECILVSKFT*LRVHYY
Trigger: ATAATAATGCACTCGCAACCAGGTAAACTTAGATAC...TAGAATGCACTCACACTCTGACTGTACGTCCTGATGAAAACCCACTTTTGGATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR TCA 90 bp AACAAACTAGTGTATCTAAGTTTACCTGGTTGCGAGTGCATTATTATTCCAGTTGTTAAGGACGAAAAATaGGCCAAGGATGATCAGACT +
Preference number: 4 (lower is better)
Translates to: NKLVYLSLPGCECIIIPVVKDEK*AKDDQT
Trigger: AGTCTGATCATCCTTGGCTCATTTTTCGTCCTTAAC...AACTGGAATAATAATGCACTCGCAACCAGGTAAACTTAGATACACTAGTTTGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000288139.11
CDS-3UTR TCA 90 bp AGTGGGGAACTACAATTATTAGGACCCATGGATATTGCTGCAGTTCAAATACAATTGTTGGCAATATCTTaGATCTGTGTCAACCAATCT +
Preference number: 4 (lower is better)
Translates to: SGELQLLGPMDIAAVQIQLLAIS*ICVNQS
Trigger: AGATTGGTTGACACAGATTCAAGATATTGCCAACAA...TTGTATTTGAACTGCAGCAATATCCATGGGTCCTAATAATTGTAGTTCCCCACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR TCA 90 bp ATCATGGAACTCTTGCCCAAAGAAAAGACTGCAAATAGTCATCTGGTATATCTTAGCAATCAAACCGGTTaGAAAGAGAGACGAAATATG +
Preference number: 4 (lower is better)
Translates to: IMELLPKEKTANSHLVYLSNQTG*KERRNM
Trigger: CATATTTCGTCTCTCTTTTCAACCGGTTTGATTGCT...AAGATATACCAGATGACTATTTGCAGTCTTTTCTTTGGGCAAGAGTTCCATGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR TCA 90 bp AACAAACTAGTGTATCTAAGTTTACCTGGTTGCGAGTGCATTATTATTCCAGTTTGTTGGCTATCTGGTTaGCTTCTGGTTTGTTGTTCT +
Preference number: 4 (lower is better)
Translates to: NKLVYLSLPGCECIIIPVCWLSG*LLVCCS
Trigger: AGAACAACAAACCAGAAGTCAACCAGATAGCCAACA...AACTGGAATAATAATGCACTCGCAACCAGGTAAACTTAGATACACTAGTTTGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR GCA 90 bp AACAAACTAGTGTATCTAAGTTTACCTGGTTGCGAGTGCATTATTATTCCAGTTAGACAATGGCAAAGTTaGTCCCACATGTATACTCCT +
Preference number: 4 (lower is better)
Translates to: NKLVYLSLPGCECIIIPVRQWQS*SHMYTP
Trigger: AGGAGTATACATGTGGGAGCAACTTTGCCATTGTCT...AACTGGAATAATAATGCACTCGCAACCAGGTAAACTTAGATACACTAGTTTGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR GCA 90 bp AACAAACTAGTGTATCTAAGTTTACCTGGTTGCGAGTGCATTATTATTCCAGTTGTTGAGGTGGGAACTTaGTTTCCTATGGAATTATGG +
Preference number: 4 (lower is better)
Translates to: NKLVYLSLPGCECIIIPVVEVGT*FPMELW
Trigger: CCATAATTCCATAGGAAAGCAAGTTCCCACCTCAAC...AACTGGAATAATAATGCACTCGCAACCAGGTAAACTTAGATACACTAGTTTGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CCA 90 bp GTGCATTCTAATGAAAACTTCAGCCCTCATTCAATTGCATATAAAAGCCCTCAAAGTGCTCAGAGGAAATaGTTAAGGTGTTCAGAAACA +
Preference number: 4 (lower is better)
Translates to: VHSNENFSPHSIAYKSPQSAQRK*LRCSET
Trigger: TGTTTCTGAACACCTTAACCATTTCCTCTGAGCACT...TTGAGGGCTTTTATATGCAATTGAATGAGGGCTGAAGTTTTCATTAGAATGCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR CCA 90 bp TTGGACCAAAATTGCTACCTATCATCTATCTTTTTGATTGCAGGGAATCCCTGCGAACTTGCTTTCCTATaGAATTATGGTTATGATGGT +
Preference number: 4 (lower is better)
Translates to: LDQNCYLSSIFLIAGNPCELAFL*NYGYDG
Trigger: ACCATCATAACCATAATTCCATAGGAAAGCAAGTTC...GCAGGGATTCCCTGCAATCAAAAAGATAGATGATAGGTAGCAATTTTGGTCCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR CCA 90 bp ATCATGGAACTCTTGCCCAAAGAAAAGACTGCAAATAGTCATCTGGTATATCTTATAATCACTGGTAGCTaGGTTCTGACTTACTTACAC +
Preference number: 4 (lower is better)
Translates to: IMELLPKEKTANSHLVYLIITGS*VLTYLH
Trigger: GTGTAAGTAAGTCAGAACCCAGCTACCAGTGATTAT...AAGATATACCAGATGACTATTTGCAGTCTTTTCTTTGGGCAAGAGTTCCATGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
3UTR CAA 72 bp GAGTGCATTCTAATGAAAACTTCAGCCCTCATTCAATaGCATATAAAAGCCCTCAAAGAGAACATACAGTAC +
Preference number: 4 (lower is better)
Translates to: ECILMKTSALIQ*HIKALKENIQY
Trigger: GTACTGTATGTTCTCTTTGAGGGCTTTTATATGCAATTGAATGAGGGCTGAAGTTTTCATTAGAATGCACTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR GCA 90 bp TGTAATTCACTTACTTACTTACCAGAGGGTGGTTCAAGTCAAACAAACAAAACCAGGACCCATGGATATTaGTGCAGTTCAAATACAATA +
Preference number: 4 (lower is better)
Translates to: CNSLTYLPEGGSSQTNKTRTHGY*CSSNTI
Trigger: TATTGTATTTGAACTGCAGCAATATCCATGGGTCCT...GGTTTTGTTTGTTTGACTTGAACCACCCTCTGGTAAGTAAGTAAGTGAATTACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR GCA 90 bp TGTAATTCACTTACTTACTTACCAGAGGGTGGTTCAAGTCAAACAAACAAAACCAAATCATGGAACTCTTaGCCAAAGAAAAGACTGCAA +
Preference number: 4 (lower is better)
Translates to: CNSLTYLPEGGSSQTNKTKSWNS*PKKRLQ
Trigger: TTGCAGTCTTTTCTTTGGGCAAGAGTTCCATGATTT...GGTTTTGTTTGTTTGACTTGAACCACCCTCTGGTAAGTAAGTAAGTGAATTACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR CCA 90 bp AACAAACTAGTGTATCTAAGTTTACCTGGTTGCGAGTGCATTATTATTCCAGTTGGTTGTTATCTCTCATaGCAACTTTCCCAAACATCT +
Preference number: 4 (lower is better)
Translates to: NKLVYLSLPGCECIIIPVGCYLS*QLSQTS
Trigger: AGATGTTTGGGAAAGTTGCCATGAGAGATAACAACC...AACTGGAATAATAATGCACTCGCAACCAGGTAAACTTAGATACACTAGTTTGTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR GCA 90 bp AACAAACTAGTGTATCTAAGTTTACCTGGTTGCGAGTGCATTATTATTCCAGTTCAGTCAGAGTGTGAGTaGATTCTAATGAAAACTTCA +
Preference number: 4 (lower is better)
Translates to: NKLVYLSLPGCECIIIPVQSECE*ILMKTS
Trigger: TGAAGTTTTCATTAGAATGCACTCACACTCTGACTG...AACTGGAATAATAATGCACTCGCAACCAGGTAAACTTAGATACACTAGTTTGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
3UTR CAA 72 bp AGAATTCAAGATCAGACACCCTTATCGACCAACATCTaGGGCAAAAATCTGCTATTCTTAAGATGTGAAAAT +
Preference number: 4 (lower is better)
Translates to: RIQDQTPLSTNI*GKNLLFLRCEN
Trigger: ATTTTCACATCTTAAGAATAGCAGATTTTTGCCCAAGATGTTGGTCGATAAGGGTGTCTGATCTTGAATTCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636938.1
3UTR CAA 72 bp AATTTTAAACAAACTAGTGTATCTAAGTTTACCTGGTaGCGAGTGCATTATTATTCCAGTTTACAGTTGCCC +
Preference number: 4 (lower is better)
Translates to: NFKQTSVSKFTW*RVHYYSSLQLP
Trigger: GGGCAACTGTAAACTGGAATAATAATGCACTCGCAACCAGGTAAACTTAGATACACTAGTTTGTTTAAAATT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CAA 90 bp CTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGGCCAGGCTCAACCGCTaGGGACCTGTTCCTACCAGG +
Preference number: 5 (lower is better)
Translates to: LSPAPRRHAFSWVGLVPWARLNR*GPVPTR
Trigger: CCTGGTAGGAACAGGTCCCAAGCGGTTGAGCCTGGC...CCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CAA 90 bp TCATCACCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCAGAGGGCCCCGCCTaGGCCGCGCCTCTCCGTCTC +
Preference number: 5 (lower is better)
Translates to: SSPLTFPCTPPPCLQLGGPEGPA*AAPLRL
Trigger: GAGACGGAGAGGCGCGGCCAAGGCGGGGCCCTCTGG...CCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGGTGATGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000288139.11
CDS-3UTR CAA 90 bp ACCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGGGGCCCACATCCCCGTaGGCTCGGGGACGCACGTTC +
Preference number: 5 (lower is better)
Translates to: TFNFPLHPAAMPSVGWAWGPTSP*ARGRTF
Trigger: GAACGTGCGTCCCCGAGCCAACGGGGATGTGGGCCC...CCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS TCA 90 bp TGGCTGGTGGCCCCAAGGTTGGGCATGCTCTCTGGGCTGGGGGACTaGCAGCCAGCTGGCAGATCAAAGAGCTGGCCCGGGAAGGAGGAG +
Preference number: 5 (lower is better)
Translates to: WLVAPRLGMLSGLGD*QPAGRSKSWPGKEE
Trigger: CTCCTCCTTCCCGGGCCAGCTCTTTGATCTGCCAGCTGGCTGTCAGTCCCCCAGCCCAGAGAGCATGCCCAACCTTGGGGCCACCAGCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636633.2
CDS-3UTR CAA 90 bp AACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGCCAGGCTCAACCGCTaGGGACCTGTTCCTACCAGG +
Preference number: 5 (lower is better)
Translates to: NFPLHPAAMPSVGWAWCPARLNR*GPVPTR
Trigger: CCTGGTAGGAACAGGTCCCAAGCGGTTGAGCCTGGC...AGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS GCA 90 bp GGGAAGGAGGAGGGTAGCAAAGGCAGCTGCCGGAAGGACTCAGGATaGTCATCCACAGGGCCAGCGGCTGTGGCCGAGCTCCTCAGAAGC +
Preference number: 5 (lower is better)
Translates to: GKEEGSKGSCRKDSG*SSTGPAAVAELLRS
Trigger: GCTTCTGAGGAGCTCGGCCACAGCCGCTGGCCCTGTGGATGAGCATCCTGAGTCCTTCCGGCAGCTGCCTTTGCTACCCTCCTCCTTCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636633.2
CDS-3UTR CAA 90 bp CTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGAGAGGTGCTCATAGTTaGGGCAGCCTTGGCCTGTCT +
Preference number: 5 (lower is better)
Translates to: LSPAPRRHAFSWVGLVPWRGAHS*GSLGLS
Trigger: AGACAGGCCAAGGCTGCCCAAACTATGAGCACCTCT...CCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CAA 90 bp GAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTGCCGCCATGCCTTCAGTaGGGTGGGCCTGGTGCCCTG +
Preference number: 5 (lower is better)
Translates to: EKQTPQQCPSGQWGRAGLPPCLQ*GGPGAL
Trigger: CAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGG...CAGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS TCA 90 bp ACCTTCTCAGGGGCAGGGCCTCGGTCACCGTCCTGGCCTGGGTCCTaGAGTCAGCTACCAGACCTGAGCCAGACCAGTCTCGAAAGCCGT +
Preference number: 5 (lower is better)
Translates to: TFSGAGPRSPSWPGS*SQLPDLSQTSLESR
Trigger: ACGGCTTTCGAGACTGGTCTGGCTCAGGTCTGGTAGCTGACTTCAGGACCCAGGCCAGGACGGTGACCGAGGCCCTGCCCCTGAGAAGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636595.1
CDS GCA 90 bp GGCACAACCATGTGCCAGGCAGCAGGTTACACACTGGGAACGTGGTaGTCCAGAGGGGCACGGTCTCACATTCGCGGATCTCCCCTGGGG +
Preference number: 5 (lower is better)
Translates to: GTTMCQAAGYTLGTW*SRGARSHIRGSPLG
Trigger: CCCCAGGGGAGATCCGCGAATGTGAGACCGTGCCCCTCTGGAGCACCACGTTCCCAGTGTGTAACCTGCTGCCTGGCACATGGTTGTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636633.2
CDS-3UTR CAA 90 bp CTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGCTACATCTTCTGCGATaGAATCGGTTCCAGCGACGC +
Preference number: 5 (lower is better)
Translates to: LSPAPRRHAFSWVGLVPWLHLLR*NRFQRR
Trigger: GCGTCGCTGGAACCGATTCAATCGCAGAAGATGTAG...CCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CAA 90 bp AACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTCGCAGGCACTCAAAGTaGAAGGAGGATCTCCGGTGG +
Preference number: 5 (lower is better)
Translates to: NFPLHPAAMPSVGWAWCPRRHSK*KEDLRW
Trigger: CCACCGGAGATCCTCCTTCAACTTTGAGTGCCTGCG...AGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS GCA 90 bp TCGCTTCATGCTAAGGAGCAGAGCTGGCTGGCATGCTGCTCTGTCTaGGCCCCAAGAGCCAGAGCTCATCACCTTCTCAGGGGCAGGGCC +
Preference number: 5 (lower is better)
Translates to: SLHAKEQSWLACCSV*APRARAHHLLRGRA
Trigger: GGCCCTGCCCCTGAGAAGGTGATGAGCTCTGGCTCTTGGGGCGCAGACAGAGCAGCATGCCAGCCAGCTCTGCTCCTTAGCATGAAGCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636595.1
CDS GCA 90 bp AGATCAAAGAGCTGGCCCGGGAAGGAGGAGGGTAGCAAAGGCAGCTaGCGGAAGGACTCAGGATGCTCATCCACAGGGCCAGCGGCTGTG +
Preference number: 5 (lower is better)
Translates to: RSKSWPGKEEGSKGS*RKDSGCSSTGPAAV
Trigger: CACAGCCGCTGGCCCTGTGGATGAGCATCCTGAGTCCTTCCGGCAGCTGCCTTTGCTACCCTCCTCCTTCCCGGGCCAGCTCTTTGATCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636633.2
CDS-3UTR CAA 90 bp AGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTGGGTTCGCGTGGTCCGCTaGCTGCTGCCGTTGATGCTG +
Preference number: 5 (lower is better)
Translates to: RSRLHSSAHLDNGAGQVWVRVVR*LLPLML
Trigger: CAGCATCAACGGCAGCAGCAAGCGGACCACGCGAAC...CCAGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CAA 90 bp CCTTCCGGAGGAGTGCTTTGCTTGGAAGGGGTCTCCCTGGGGCCTTGGGTCTGCTGGTGGTTGATGAGCTaGTGGCAGCCTACGCGGATC +
Preference number: 5 (lower is better)
Translates to: PSGGVLCLEGVSLGPWVCWWLMS*WQPTRI
Trigger: GATCCGCGTAGGCTGCCACAAGCTCATCAACCACCA...GCAGACCCAAGGCCCCAGGGAGACCCCTTCCAAGCAAAGCACTCCTCCGGAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR CAA 90 bp GAGCTGCGGTGCAGGGACGGCAGGCTGCCGTTCACCTGGTCCAGGGCCTCTGACATGGCAACTAATCTCTaGCACGCTACCCTGTGTGGA +
Preference number: 5 (lower is better)
Translates to: ELRCRDGRLPFTWSRASDMATNL*HATLCG
Trigger: TCCACACAGGGTAGCGTGCAAGAGATTAGTTGCCAT...GTCAGAGGCCCTGGACCAGGTGAACGGCAGCCTGCCGTCCCTGCACCGCAGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636448.1
CDS-3UTR CAA 90 bp CCTCCTCACCCATCCTCTGTGAGAGGGCGGGGCCTGCTGTTTCCTGCAGCTGGGGTCCTCCAAGAATCCTaGGGGATGATGGTAGCCTCG +
Preference number: 5 (lower is better)
Translates to: PPHPSSVRGRGLLFPAAGVLQES*GMMVAS
Trigger: CGAGGCTACCATCATCCCCAAGGATTCTTGGAGGAC...CCCAGCTGCAGGAAACAGCAGGCCCCGCCCTCTCACAGAGGATGGGTGAGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CAA 90 bp CGACACTCCAATCCTATAGATCACCACGTTGCTCCTCTGTCCCCAGCACCCCTTGGGCCCACATCCCCGTaGGCTCGGGGACGCACGTTC +
Preference number: 5 (lower is better)
Translates to: RHSNPIDHHVAPLSPAPLGPTSP*ARGRTF
Trigger: GAACGTGCGTCCCCGAGCCAACGGGGATGTGGGCCC...AAGGGGTGCTGGGGACAGAGGAGCAACGTGGTGATCTATAGGATTGGAGTGTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR CAA 90 bp GCTCCGCAGATGAGCCACGGCCCCGCTTCCACCTTCCGGAGGAGTGCTTTGCTTTTCCGGAGGAGTGCTTaGCTTGGAAGGGGTCTCCCT +
Preference number: 5 (lower is better)
Translates to: APQMSHGPASTFRRSALLFRRSA*LGRGLP
Trigger: AGGGAGACCCCTTCCAAGCAAAGCACTCCTCCGGAA...AAGCAAAGCACTCCTCCGGAAGGTGGAAGCGGGGCCGTGGCTCATCTGCGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS TCA 90 bp ACGGGACCTCTTCCTGGCTGCTCTGCCGGCGCAGGCACTCAAAGTTaGAGGAGGATCTCCGGTGGGCTGGGAAAGCAAAGGGCATCACAC +
Preference number: 5 (lower is better)
Translates to: TGPLPGCSAGAGTQS*RRISGGLGKQRASH
Trigger: GTGTGATGCCCTTTGCTTTCCCAGCCCACCGGAGATCCTCCTTCAACTTTGAGTGCCTGCGCCGGCAGAGCAGCCAGGAAGAGGTCCCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636581.2
CDS-3UTR CAA 90 bp GGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCAGACTCCACAGCAGTGCCCATTGCCTCTTGCATAGTTaGCCTCGTTCGCGTGGTCCG +
Preference number: 5 (lower is better)
Translates to: GGPGALVHGRSRLHSSAHCLLHS*PRSRGP
Trigger: CGGACCACGCGAACGAGGCAAACTATGCAAGAGGCA...ATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTACCAGGGCACCAGGCCCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CAA 90 bp AACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGAAGTCTGGTGCCTCTaGCATAGTTTGCCTCGTTCG +
Preference number: 5 (lower is better)
Translates to: NFPLHPAAMPSVGWAWCPEVWCL*HSLPRS
Trigger: CGAACGAGGCAAACTATGCAAGAGGCACCAGACTTC...AGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CAA 90 bp CCTCCTCACCCATCCTCTGTGAGAGGGCGGGGCCTGCTGTTTCCTGCAGCTGGGCCAAGACAGGACAGTTaGCTTGGAGCTATTCGGCTG +
Preference number: 5 (lower is better)
Translates to: PPHPSSVRGRGLLFPAAGPRQDS*LGAIRL
Trigger: CAGCCGAATAGCTCCAAGCAAACTGTCCTGTCTTGG...CCCAGCTGCAGGAAACAGCAGGCCCCGCCCTCTCACAGAGGATGGGTGAGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CAA 90 bp GCTCCGCAGATGAGCCACGGCCCCGCTTCCACCTTCCGGAGGAGTGCTTTGCTTAGAGGTGCTCATAGTTaGGGCAGCCTTGGCCTGTCT +
Preference number: 5 (lower is better)
Translates to: APQMSHGPASTFRRSALLRGAHS*GSLGLS
Trigger: AGACAGGCCAAGGCTGCCCAAACTATGAGCACCTCT...AAGCAAAGCACTCCTCCGGAAGGTGGAAGCGGGGCCGTGGCTCATCTGCGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR CAA 90 bp TCCTGTGGACACGTTAAGATGGAACCTGAGGTGTTGCCTGGATTGGTTTTGGCACCAGAGGGCCCCGCCTaGGCCGCGCCTCTCCGTCTC +
Preference number: 5 (lower is better)
Translates to: SCGHVKMEPEVLPGLVLAPEGPA*AAPLRL
Trigger: GAGACGGAGAGGCGCGGCCAAGGCGGGGCCCTCTGG...TGCCAAAACCAATCCAGGCAACACCTCAGGTTCCATCTTAACGTGTCCACAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000640483.1
CDS-3UTR CAA 90 bp CTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGAAGACAAGGATGAGGTaGGTGAAGATGTGGTGGTTG +
Preference number: 5 (lower is better)
Translates to: LSPAPRRHAFSWVGLVPWKTRMR*VKMWWL
Trigger: CAACCACCACATCTTCACCAACCTCATCCTTGTCTT...CCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CAA 90 bp CCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTAGTCCTTTTGCTCTGTaGATGGCCCTGAGGGGACGC +
Preference number: 5 (lower is better)
Translates to: PLTFPCTPPPCLQLGGPGSPFAL*MALRGR
Trigger: GCGTCCCCTCAGGGCCATCAACAGAGCAAAAGGACT...ACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CAA 90 bp GCAGATGAGCCACGGCCCCGCTTCCACCTTCCGGAGGAGTGCTTTGCTTGGAAGAGTCCTTTTGCTCTGTaGATGGCCCTGAGGGGACGC +
Preference number: 5 (lower is better)
Translates to: ADEPRPRFHLPEECFAWKSPFAL*MALRGR
Trigger: GCGTCCCCTCAGGGCCATCAACAGAGCAAAAGGACT...CTTCCAAGCAAAGCACTCCTCCGGAAGGTGGAAGCGGGGCCGTGGCTCATCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CAA 90 bp GGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCGCAGGCACTCAAAGTaGAAGGAGGATCTCCGGTGG +
Preference number: 5 (lower is better)
Translates to: GGPGALVHGRSRLHSSAHRRHSK*KEDLRW
Trigger: CCACCGGAGATCCTCCTTCAACTTTGAGTGCCTGCG...ATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTACCAGGGCACCAGGCCCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CAA 90 bp GGCCTTAGCCACAAACGCCTTCCGACTAACCAGCTTGGTGCCGTAGCTCAGGCAGGAGGAGTGCTTTGCTaGGAAGGGGTCTCCCTGGGG +
Preference number: 5 (lower is better)
Translates to: GLSHKRLPTNQLGAVAQAGGVLC*EGVSLG
Trigger: CCCCAGGGAGACCCCTTCCAAGCAAAGCACTCCTCC...TGCCTGAGCTACGGCACCAAGCTGGTTAGTCGGAAGGCGTTTGTGGCTAAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000636938.1
ENST00000638120.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CAA 90 bp TCCCTTTCACGAAAAAGAACCACCGTGAGCAACGTCCGCGACAGGCAGCCCTGGGGAGGAGTGCTTTGCTaGGAAGGGGTCTCCCTGGGG +
Preference number: 5 (lower is better)
Translates to: SLSRKRTTVSNVRDRQPWGGVLC*EGVSLG
Trigger: CCCCAGGGAGACCCCTTCCAAGCAAAGCACTCCTCC...CCAGGGCTGCCTGTCGCGGACGTTGCTCACGGTGGTTCTTTTTCGTGAAAGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS GCA 90 bp GTTCTCTGCCGGGACACCGTCTTTCAGAGTCAGGGTGGCCCCGGATaGTCAGCAACGAGCCCAGGAAGAAGCATGCGGTTTGTCCAAGAG +
Preference number: 5 (lower is better)
Translates to: VLCRDTVFQSQGGPG*SATSPGRSMRFVQE
Trigger: CTCTTGGACAAACCGCATGCTTCTTCCTGGGCTCGTTGCTGAGCATCCGGGGCCACCCTGACTCTGAAAGACGGTGTCCCGGCAGAGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636581.2
CDS-3UTR CAA 90 bp ATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTGCCTCTTGCATAGTTaGCCTCGTTCGCGTGGTCCG +
Preference number: 5 (lower is better)
Translates to: MGEADSTAVPIWTMGQGRCLLHS*PRSRGP
Trigger: CGGACCACGCGAACGAGGCAAACTATGCAAGAGGCA...CCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CAA 90 bp AGCGCCGAGGGGCCTGTCAGTCTTTGGGAGTTCGGGCAAACTAGGGATGCAGGATGCCTCTTGCATAGTTaGCCTCGTTCGCGTGGTCCG +
Preference number: 5 (lower is better)
Translates to: SAEGPVSLWEFGQTRDAGCLLHS*PRSRGP
Trigger: CGGACCACGCGAACGAGGCAAACTATGCAAGAGGCA...TCCTGCATCCCTAGTTTGCCCGAACTCCCAAAGACTGACAGGCCCCTCGGCGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR CAA 90 bp CCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCAGAATAGTTTGGGCAGCCTaGGCCTGTCTAGCAGCATCG +
Preference number: 5 (lower is better)
Translates to: PPCLQLGGPGALVHGRSRIVWAA*ACLAAS
Trigger: CGATGCTGCTAGACAGGCCAAGGCTGCCCAAACTAT...TCTGCTTCTCCCATGTACCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CAA 90 bp GCAGATGAGCCACGGCCCCGCTTCCACCTTCCGGAGGAGTGCTTTGCTTGGAAGAGAGGTGCTCATAGTTaGGGCAGCCTTGGCCTGTCT +
Preference number: 5 (lower is better)
Translates to: ADEPRPRFHLPEECFAWKRGAHS*GSLGLS
Trigger: AGACAGGCCAAGGCTGCCCAAACTATGAGCACCTCT...CTTCCAAGCAAAGCACTCCTCCGGAAGGTGGAAGCGGGGCCGTGGCTCATCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR CAA 90 bp ACCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGCTACATTCCGTGCCATaGGCAGTACACTGGCGTCCA +
Preference number: 5 (lower is better)
Translates to: TFNFPLHPAAMPSVGWAWLHSVP*AVHWRP
Trigger: TGGACGCCAGTGTACTGCCAATGGCACGGAATGTAG...CCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CAA 90 bp GCAGATGAGCCACGGCCCCGCTTCCACCTTCCGGAGGAGTGCTTTGCTTGGAAGCTACATTCCGTGCCATaGGCAGTACACTGGCGTCCA +
Preference number: 5 (lower is better)
Translates to: ADEPRPRFHLPEECFAWKLHSVP*AVHWRP
Trigger: TGGACGCCAGTGTACTGCCAATGGCACGGAATGTAG...CTTCCAAGCAAAGCACTCCTCCGGAAGGTGGAAGCGGGGCCGTGGCTCATCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR CAA 90 bp AGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTGGTGGTGGTTGATGAGCTaGTGGCAGCCTACGCGGATC +
Preference number: 5 (lower is better)
Translates to: RSRLHSSAHLDNGAGQVWWWLMS*WQPTRI
Trigger: GATCCGCGTAGGCTGCCACAAGCTCATCAACCACCA...CCAGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CAA 90 bp CCTTCCGGAGGAGTGCTTTGCTTGGAAGGGGTCTCCCTGGGGCCTTGGGTCTGCGTGAAGATGTGGTGGTaGATGAGCTTGTGGCAGCCT +
Preference number: 5 (lower is better)
Translates to: PSGGVLCLEGVSLGPWVCVKMWW*MSLWQP
Trigger: AGGCTGCCACAAGCTCATCAACCACCACATCTTCAC...GCAGACCCAAGGCCCCAGGGAGACCCCTTCCAAGCAAAGCACTCCTCCGGAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR CAA 90 bp CGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCACTGCAGAAGGCCCCTTaGTGGAGGAAAGCTCCAAAA +
Preference number: 5 (lower is better)
Translates to: RRHAFSWVGLVPWYMGEALQKAP*WRKAPK
Trigger: TTTTGGAGCTTTCCTCCACAAAGGGGCCTTCTGCAG...TGCTTCTCCCATGTACCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CAA 90 bp CCTTCCGGAGGAGTGCTTTGCTTGGAAGGGGTCTCCCTGGGGCCTTGGGTCTGCCTGCAGAAGGCCCCTTaGTGGAGGAAAGCTCCAAAA +
Preference number: 5 (lower is better)
Translates to: PSGGVLCLEGVSLGPWVCLQKAP*WRKAPK
Trigger: TTTTGGAGCTTTCCTCCACAAAGGGGCCTTCTGCAG...GCAGACCCAAGGCCCCAGGGAGACCCCTTCCAAGCAAAGCACTCCTCCGGAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CAA 90 bp GGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTAGTCCTTTTGCTCTGTaGATGGCCCTGAGGGGACGC +
Preference number: 5 (lower is better)
Translates to: GEADSTAVPIWTMGQGRSSPFAL*MALRGR
Trigger: GCGTCCCCTCAGGGCCATCAACAGAGCAAAAGGACT...AGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CAA 90 bp GCAGATGAGCCACGGCCCCGCTTCCACCTTCCGGAGGAGTGCTTTGCTTGGAAGCGCGGTGGTTGTAGATaGGGCCGATGTTCTCTCCAT +
Preference number: 5 (lower is better)
Translates to: ADEPRPRFHLPEECFAWKRGGCR*GRCSLH
Trigger: ATGGAGAGAACATCGGCCCAATCTACAACCACCGCG...CTTCCAAGCAAAGCACTCCTCCGGAAGGTGGAAGCGGGGCCGTGGCTCATCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CAA 90 bp AACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTAGGTTCCCTTCGGTCTaGATCTTAAGAGCCGTTCGA +
Preference number: 5 (lower is better)
Translates to: NFPLHPAAMPSVGWAWCPRFPSV*ILRAVR
Trigger: TCGAACGGCTCTTAAGATCAAGACCGAAGGGAACCT...AGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CAA 90 bp CTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGCTTTCCCACCAGTCCTaGTTCTTTCCGTTTCTTGAA +
Preference number: 5 (lower is better)
Translates to: LSPAPRRHAFSWVGLVPWLSHQS*FFPFLE
Trigger: TTCAAGAAACGGAAAGAACAAGGACTGGTGGGAAAG...CCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CAA 90 bp CCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGTAGTAGCCATAGTTTaGCCTGCTCCAGGTGGGCGA +
Preference number: 5 (lower is better)
Translates to: PLTFPCTPPPCLQLGGPGVVAIV*PAPGGR
Trigger: TCGCCCACCTGGAGCAGGCAAAACTATGGCTACTAC...ACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CAA 90 bp TCCACCTTCCGGAGGAGTGCTTTGCTTGGAAGGGGTCTCCCTGGGGCCTTGGGTGAGGTGTTGCCTGGATaGGTTTTGGCATGCGGGTGT +
Preference number: 5 (lower is better)
Translates to: STFRRSALLGRGLPGALGEVLPG*VLACGC
Trigger: ACACCCGCATGCCAAAACCAATCCAGGCAACACCTC...ACCCAAGGCCCCAGGGAGACCCCTTCCAAGCAAAGCACTCCTCCGGAAGGTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS TCA 90 bp GGACTGGGCCAGGCCATTCATCTTCAGGATACAAGCGCCAGGCTTTaGGACTCCAGCCAAAGAACCCTGCCTGGCAGAGCCTGTTCCCCA +
Preference number: 5 (lower is better)
Translates to: GLGQAIHLQDTSARL*DSSQRTLPGRACSP
Trigger: TGGGGAACAGGCTCTGCCAGGCAGGGTTCTTTGGCTGGAGTCTCAAAGCCTGGCGCTTGTATCCTGAAGATGAATGGCCTGGCCCAGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636629.1
CDS GCA 90 bp AGAAGCCCTGGCGCTGCATACTGTGGGGAGCGCACAGCACTTCAGTaGAAGAACACAAGTCCTGCCAGAACCCCACGACACTTCCCACTG +
Preference number: 5 (lower is better)
Translates to: RSPGAAYCGERTALQ*KNTSPARTPRHFPL
Trigger: CAGTGGGAAGTGTCGTGGGGTTCTGGCAGGACTTGTGTTCTTGCACTGAAGTGCTGTGCGCTCCCCACAGTATGCAGCGCCAGGGCTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636581.2
CDS GCA 90 bp GGCTGGGAAAGCAAAGGGCATCACACAGCTGTGAAGCAAGTTCTCTaGCGGGACACCGTCTTTCAGAGTCAGGGTGGCCCCGGATGCTCA +
Preference number: 5 (lower is better)
Translates to: GWESKGHHTAVKQVL*RDTVFQSQGGPGCS
Trigger: TGAGCATCCGGGGCCACCCTGACTCTGAAAGACGGTGTCCCGGCAGAGAACTTGCTTCACAGCTGTGTGATGCCCTTTGCTTTCCCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636581.2
CDS GCA 90 bp TTCAGGATACAAGCGCCAGGCTTTGAGACTCCAGCCAAAGAACCCTaGCTGGCAGAGCCTGTTCCCCATCACAGGCAGGCTGCACTCAGC +
Preference number: 5 (lower is better)
Translates to: FRIQAPGFETPAKEP*LAEPVPHHRQAALS
Trigger: GCTGAGTGCAGCCTGCCTGTGATGGGGAACAGGCTCTGCCAGGCAGGGTTCTTTGGCTGGAGTCTCAAAGCCTGGCGCTTGTATCCTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636629.1
CDS CCA 90 bp CCCTGGGGGCCACTGACCACAACTTGCAGAGGCTGGAAGGAGGAATaGTTGCTGGTCCAAAGGCTACAGAGCAGCTGGCTTTTAGGCCAG +
Preference number: 5 (lower is better)
Translates to: PWGPLTTTCRGWKEE*LLVQRLQSSWLLGQ
Trigger: CTGGCCTAAAAGCCAGCTGCTCTGTAGCCTTTGGACCAGCAACCATTCCTCCTTCCAGCCTCTGCAAGTTGTGGTCAGTGGCCCCCAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637589.2
CDS-3UTR CAA 90 bp AGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTGGATAGTTTGGGCAGCCTaGGCCTGTCTAGCAGCATCG +
Preference number: 5 (lower is better)
Translates to: RSRLHSSAHLDNGAGQVWIVWAA*ACLAAS
Trigger: CGATGCTGCTAGACAGGCCAAGGCTGCCCAAACTAT...CCAGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CAA 90 bp ATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGAGAGGTGCTCATAGTTaGGGCAGCCTTGGCCTGTCT +
Preference number: 5 (lower is better)
Translates to: MGEADSTAVPIWTMGQGRRGAHS*GSLGLS
Trigger: AGACAGGCCAAGGCTGCCCAAACTATGAGCACCTCT...CCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CAA 90 bp AACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTTTGCTGACGTTTTCTTaGGGAGAGAGATCCTACAGG +
Preference number: 5 (lower is better)
Translates to: NFPLHPAAMPSVGWAWCPLLTFS*GERSYR
Trigger: CCTGTAGGATCTCTCTCCCAAAGAAAACGTCAGCAA...AGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CAA 90 bp GGCCTTAGCCACAAACGCCTTCCGACTAACCAGCTTGGTGCCGTAGCTCAGGCACGGGCAGGTCGGCTGTaGGACGAGTTACCCTGTTTT +
Preference number: 5 (lower is better)
Translates to: GLSHKRLPTNQLGAVAQARAGRL*DELPCF
Trigger: AAAACAGGGTAACTCGTCCAACAGCCGACCTGCCCG...TGCCTGAGCTACGGCACCAAGCTGGTTAGTCGGAAGGCGTTTGTGGCTAAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR CAA 90 bp TCCCTTTCACGAAAAAGAACCACCGTGAGCAACGTCCGCGACAGGCAGCCCTGGCGGGCAGGTCGGCTGTaGGACGAGTTACCCTGTTTT +
Preference number: 5 (lower is better)
Translates to: SLSRKRTTVSNVRDRQPWRAGRL*DELPCF
Trigger: AAAACAGGGTAACTCGTCCAACAGCCGACCTGCCCG...CCAGGGCTGCCTGTCGCGGACGTTGCTCACGGTGGTTCTTTTTCGTGAAAGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR CAA 90 bp GGAGGTCATGGCGGACTGGCATACAAAAGGAACTCTGTCAGCTCAGCGCCGAGGCTCCAGATTTGCCGCTaGAGTGGTTCCCGCCTTCTG +
Preference number: 5 (lower is better)
Translates to: GGHGGLAYKRNSVSSAPRLQICR*SGSRLL
Trigger: CAGAAGGCGGGAACCACTCAAGCGGCAAATCTGGAG...CCTCGGCGCTGAGCTGACAGAGTTCCTTTTGTATGCCAGTCCGCCATGACCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR CAA 90 bp CGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCACAGTGCCTGGTCACTTaGAAGATTCTTAAGAGGCGC +
Preference number: 5 (lower is better)
Translates to: RRHAFSWVGLVPWYMGEAQCLVT*KILKRR
Trigger: GCGCCTCTTAAGAATCTTCAAAGTGACCAGGCACTG...TGCTTCTCCCATGTACCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CAA 90 bp GCTCCGCAGATGAGCCACGGCCCCGCTTCCACCTTCCGGAGGAGTGCTTTGCTTCAGTGCCTGGTCACTTaGAAGATTCTTAAGAGGCGC +
Preference number: 5 (lower is better)
Translates to: APQMSHGPASTFRRSALLQCLVT*KILKRR
Trigger: GCGCCTCTTAAGAATCTTCAAAGTGACCAGGCACTG...AAGCAAAGCACTCCTCCGGAAGGTGGAAGCGGGGCCGTGGCTCATCTGCGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR CAA 90 bp CTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGGGTGCTCCGCTTGGTTaGCGTTTCATCAAAATTAAA +
Preference number: 5 (lower is better)
Translates to: LSPAPRRHAFSWVGLVPWGAPLG*RFIKIK
Trigger: TTTAATTTTGATGAAACGCAAACCAAGCGGAGCACC...CCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CAA 90 bp GGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCCTACGCGGATCGGGTaGGTCTTGCTAAGAATGAAG +
Preference number: 5 (lower is better)
Translates to: GGPGALVHGRSRLHSSAHPTRIG*VLLRMK
Trigger: CTTCATTCTTAGCAAGACCAACCCGATCCGCGTAGG...ATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTACCAGGGCACCAGGCCCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CAA 90 bp AACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTTCTTCAGGGTTACTTTaGGCTTCATCCGTACAGCGA +
Preference number: 5 (lower is better)
Translates to: NFPLHPAAMPSVGWAWCPSSGLL*ASSVQR
Trigger: TCGCTGTACGGATGAAGCCAAAAGTAACCCTGAAGA...AGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CAA 90 bp GGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTCGCGGTGGTTGTAGATaGGGCCGATGTTCTCTCCAT +
Preference number: 5 (lower is better)
Translates to: GEADSTAVPIWTMGQGRSRGGCR*GRCSLH
Trigger: ATGGAGAGAACATCGGCCCAATCTACAACCACCGCG...AGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CAA 90 bp GCTCCGCAGATGAGCCACGGCCCCGCTTCCACCTTCCGGAGGAGTGCTTTGCTTAGGTTCCCTTCGGTCTaGATCTTAAGAGCCGTTCGA +
Preference number: 5 (lower is better)
Translates to: APQMSHGPASTFRRSALLRFPSV*ILRAVR
Trigger: TCGAACGGCTCTTAAGATCAAGACCGAAGGGAACCT...AAGCAAAGCACTCCTCCGGAAGGTGGAAGCGGGGCCGTGGCTCATCTGCGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CAA 90 bp ATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCAGACTCCACCGCCTGTAGGGCAATaGTGGTGTTCTTCGCAGGGT +
Preference number: 5 (lower is better)
Translates to: MPSVGWAWCPGTWEKQTPPPVGQ*WCSSQG
Trigger: ACCCTGCGAAGAACACCACAATTGCCCTACAGGCGG...TGGAGTCTGCTTCTCCCATGTACCAGGGCACCAGGCCCACCCAACTGAAGGCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CAA 90 bp ATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTTGCTCTCTTCAGAGTaGTCTGCTTCGCTGAGGGCC +
Preference number: 5 (lower is better)
Translates to: MGEADSTAVPIWTMGQGRLLSSE*SASLRA
Trigger: GGCCCTCAGCGAAGCAGACAACTCTGAAGAGAGCAA...CCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422281.7
CDS TCA 90 bp GAGGATCTCCGGTGGGCTGGGAAAGCAAAGGGCATCACACAGCTGTaGAGCAAGTTCTCTGCCGGGACACCGTCTTTCAGAGTCAGGGTG +
Preference number: 5 (lower is better)
Translates to: EDLRWAGKAKGITQL*SKFSAGTPSFRVRV
Trigger: CACCCTGACTCTGAAAGACGGTGTCCCGGCAGAGAACTTGCTTCACAGCTGTGTGATGCCCTTTGCTTTCCCAGCCCACCGGAGATCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636581.2
CDS GCA 90 bp AAGGCAGCCCATAGGGCAACTGATCCGAGTCAGAAGCCCTGGCGCTaGATACTGTGGGGAGCGCACAGCACTTCAGTGCAAGAACACAAG +
Preference number: 5 (lower is better)
Translates to: KAAHRATDPSQKPWR*ILWGAHSTSVQEHK
Trigger: CTTGTGTTCTTGCACTGAAGTGCTGTGCGCTCCCCACAGTATGCAGCGCCAGGGCTTCTGACTCGGATCAGTTGCCCTATGGGCTGCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636581.2
CDS-3UTR CAA 90 bp GGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCAGACTCCACAGCAGTGCCCATAGCATCGATTGCAGCTaGCCAAGACAGGACAGTTTG +
Preference number: 5 (lower is better)
Translates to: GGPGALVHGRSRLHSSAHSIDCS*PRQDSL
Trigger: CAAACTGTCCTGTCTTGGCAAGCTGCAATCGATGCT...ATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTACCAGGGCACCAGGCCCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CAA 90 bp ATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCAGACTCCATCAAAGCCTCCAGATTaGCCGCTTGAGTGGTTCCCG +
Preference number: 5 (lower is better)
Translates to: MPSVGWAWCPGTWEKQTPSKPPD*PLEWFP
Trigger: CGGGAACCACTCAAGCGGCAAATCTGGAGGCTTTGA...TGGAGTCTGCTTCTCCCATGTACCAGGGCACCAGGCCCACCCAACTGAAGGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CAA 90 bp GGCCTTAGCCACAAACGCCTTCCGACTAACCAGCTTGGTGCCGTAGCTCAGGCATCAAAGCCTCCAGATTaGCCGCTTGAGTGGTTCCCG +
Preference number: 5 (lower is better)
Translates to: GLSHKRLPTNQLGAVAQASKPPD*PLEWFP
Trigger: CGGGAACCACTCAAGCGGCAAATCTGGAGGCTTTGA...TGCCTGAGCTACGGCACCAAGCTGGTTAGTCGGAAGGCGTTTGTGGCTAAGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR CAA 90 bp TCATCACCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCTACATTCCGTGCCATaGGCAGTACACTGGCGTCCA +
Preference number: 5 (lower is better)
Translates to: SSPLTFPCTPPPCLQLGGLHSVP*AVHWRP
Trigger: TGGACGCCAGTGTACTGCCAATGGCACGGAATGTAG...CCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGGTGATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CAA 90 bp CGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCAAGAGACGAAATATGCTaGGAGGCCCAAGCTGTACAT +
Preference number: 5 (lower is better)
Translates to: RRHAFSWVGLVPWYMGEARDEIC*EAQAVH
Trigger: ATGTACAGCTTGGGCCTCCAAGCATATTTCGTCTCT...TGCTTCTCCCATGTACCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CAA 90 bp GGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCAGTGCCTGGTCACTTaGAAGATTCTTAAGAGGCGC +
Preference number: 5 (lower is better)
Translates to: GGPGALVHGRSRLHSSAHQCLVT*KILKRR
Trigger: GCGCCTCTTAAGAATCTTCAAAGTGACCAGGCACTG...ATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTACCAGGGCACCAGGCCCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CAA 90 bp GCAGATGAGCCACGGCCCCGCTTCCACCTTCCGGAGGAGTGCTTTGCTTGGAAGCGGATCGGGTTGGTCTaGCTAAGAATGAAGAAAGCG +
Preference number: 5 (lower is better)
Translates to: ADEPRPRFHLPEECFAWKRIGLV*LRMKKA
Trigger: CGCTTTCTTCATTCTTAGCAAGACCAACCCGATCCG...CTTCCAAGCAAAGCACTCCTCCGGAAGGTGGAAGCGGGGCCGTGGCTCATCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR CAA 90 bp GGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTCCTACGCGGATCGGGTaGGTCTTGCTAAGAATGAAG +
Preference number: 5 (lower is better)
Translates to: GEADSTAVPIWTMGQGRSPTRIG*VLLRMK
Trigger: CTTCATTCTTAGCAAGACCAACCCGATCCGCGTAGG...AGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CAA 90 bp ATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGCTGCAGAAGGCCCCTTaGTGGAGGAAAGCTCCAAAA +
Preference number: 5 (lower is better)
Translates to: MGEADSTAVPIWTMGQGRLQKAP*WRKAPK
Trigger: TTTTGGAGCTTTCCTCCACAAAGGGGCCTTCTGCAG...CCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CAA 90 bp ATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCAGACTCCACGCGGTGGTTGTAGATaGGGCCGATGTTCTCTCCAT +
Preference number: 5 (lower is better)
Translates to: MPSVGWAWCPGTWEKQTPRGGCR*GRCSLH
Trigger: ATGGAGAGAACATCGGCCCAATCTACAACCACCGCG...TGGAGTCTGCTTCTCCCATGTACCAGGGCACCAGGCCCACCCAACTGAAGGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CAA 90 bp CCTGGTACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCCGCGGTGGTTGTAGATaGGGCCGATGTTCTCTCCAT +
Preference number: 5 (lower is better)
Translates to: PGTWEKQTPQQCPSGQWGRGGCR*GRCSLH
Trigger: ATGGAGAGAACATCGGCCCAATCTACAACCACCGCG...GCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTACCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CAA 90 bp GGCCTTAGCCACAAACGCCTTCCGACTAACCAGCTTGGTGCCGTAGCTCAGGCACGCGGTGGTTGTAGATaGGGCCGATGTTCTCTCCAT +
Preference number: 5 (lower is better)
Translates to: GLSHKRLPTNQLGAVAQARGGCR*GRCSLH
Trigger: ATGGAGAGAACATCGGCCCAATCTACAACCACCGCG...TGCCTGAGCTACGGCACCAAGCTGGTTAGTCGGAAGGCGTTTGTGGCTAAGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636938.1
ENST00000638120.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CAA 90 bp CGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCAATGTCCATGGCATCATaGAACATCTTGGACTGCTCG +
Preference number: 5 (lower is better)
Translates to: RRHAFSWVGLVPWYMGEAMSMAS*NILDCS
Trigger: CGAGCAGTCCAAGATGTTCAATGATGCCATGGACAT...TGCTTCTCCCATGTACCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CAA 90 bp CCTTCCGGAGGAGTGCTTTGCTTGGAAGGGGTCTCCCTGGGGCCTTGGGTCTGCATGTCCATGGCATCATaGAACATCTTGGACTGCTCG +
Preference number: 5 (lower is better)
Translates to: PSGGVLCLEGVSLGPWVCMSMAS*NILDCS
Trigger: CGAGCAGTCCAAGATGTTCAATGATGCCATGGACAT...GCAGACCCAAGGCCCCAGGGAGACCCCTTCCAAGCAAAGCACTCCTCCGGAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CAA 90 bp CCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTATGGCAACTAATCTCTaGCACGCTACCCTGTGTGGA +
Preference number: 5 (lower is better)
Translates to: PLTFPCTPPPCLQLGGPGMATNL*HATLCG
Trigger: TCCACACAGGGTAGCGTGCAAGAGATTAGTTGCCAT...ACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CAA 90 bp ATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCAGACTCCAGTAGTAGCCATAGTTTaGCCTGCTCCAGGTGGGCGA +
Preference number: 5 (lower is better)
Translates to: MPSVGWAWCPGTWEKQTPVVAIV*PAPGGR
Trigger: TCGCCCACCTGGAGCAGGCAAAACTATGGCTACTAC...TGGAGTCTGCTTCTCCCATGTACCAGGGCACCAGGCCCACCCAACTGAAGGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CAA 90 bp ACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGTCCTCCAAGAATCCTaGGGGATGATGGTAGCCTCG +
Preference number: 5 (lower is better)
Translates to: TWEKQTPQQCPSGQWGRAVLQES*GMMVAS
Trigger: CGAGGCTACCATCATCCCCAAGGATTCTTGGAGGAC...TGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CAA 90 bp CGGTGCAGGGACGGCAGGCTGCCGTTCACCTGGTCCAGGGCCTCTGACTGCTCCCAGCGATTTCGTGTTTaGTTGCTGACACAAATTTTG +
Preference number: 5 (lower is better)
Translates to: RCRDGRLPFTWSRASDCSQRFRV*LLTQIL
Trigger: CAAAATTTGTGTCAGCAACAAAACACGAAATCGCTG...GGAGCAGTCAGAGGCCCTGGACCAGGTGAACGGCAGCCTGCCGTCCCTGCACCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636448.1
CDS-3UTR CAA 90 bp AGCGCCGAGGGGCCTGTCAGTCTTTGGGAGTTCGGGCAAACTAGGGATGCAGGAGCATCTGTAGGGCAATaGTGGTGTTCTTCGCAGGGT +
Preference number: 5 (lower is better)
Translates to: SAEGPVSLWEFGQTRDAGASVGQ*WCSSQG
Trigger: ACCCTGCGAAGAACACCACAATTGCCCTACAGATGC...TCCTGCATCCCTAGTTTGCCCGAACTCCCAAAGACTGACAGGCCCCTCGGCGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CAA 90 bp AGCCACAAACGCCTTCCGACTAACCAGCTTGGTGCCGTAGCTCAGGCAGAAAATGGAGGAGTGCTTTGCTaGGAAGGGGTCTCCCTGGGG +
Preference number: 5 (lower is better)
Translates to: SHKRLPTNQLGAVAQAENGGVLC*EGVSLG
Trigger: CCCCAGGGAGACCCCTTCCAAGCAAAGCACTCCTCC...ATTTTCTGCCTGAGCTACGGCACCAAGCTGGTTAGTCGGAAGGCGTTTGTGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000636938.1
ENST00000638120.1
ENST00000640483.1
ENST00000645528.2
CDS GCA 90 bp CTAGGAGACACGCAGAGTTGCCTCACACGTGGCAGCAGGAGAAGGTaGAACACGGATCCGACTGCTTACCCACTAAGGACACCAAGAACC +
Preference number: 5 (lower is better)
Translates to: LGDTQSCLTRGSRRR*NTDPTAYPLRTPRT
Trigger: GGTTCTTGGTGTCCTTAGTGGGTAAGCAGTCGGATCCGTGTTGCACCTTCTCCTGCTGCCACGTGTGAGGCAACTCTGCGTGTCTCCTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464429.1
CDS GCA 90 bp TACAGCCACCTGGGCTCTTCGACTGCCTCCATTCTTAGACTAGGCTaGCTCCCTCCACCCACAACCCATCCCACTGCCCACTTGATGTTA +
Preference number: 5 (lower is better)
Translates to: YSHLGSSTASILRLG*LPPPTTHPTAHLML
Trigger: TAACATCAAGTGGGCAGTGGGATGGGTTGTGGGTGGAGGGAGGCAGCCTAGTCTAAGAATGGAGGCAGTCGAAGAGCCCAGGTGGCTGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636595.1
CDS GCA 90 bp GCTGTGCCAGCTACGGGTAACCCCTTCAGCAACAAAAGCTCACGTTaGTTCTCGCTTCATGCTAAGGAGCAGAGCTGGCTGGCATGCTGC +
Preference number: 5 (lower is better)
Translates to: AVPATGNPFSNKSSR*FSLHAKEQSWLACC
Trigger: GCAGCATGCCAGCCAGCTCTGCTCCTTAGCATGAAGCGAGAAGCAACGTGAGCTTTTGTTGCTGAAGGGGTTACCCGTAGCTGGCACAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636595.1
CDS GCA 90 bp CCTAAGACACAGCCAGCAGCCTCCTCCCAGAAACCTCCTACCCCTTaGAGGGGCCTCTGTCGAGAGCACACCTATCGTTTACAAGGCATT +
Preference number: 5 (lower is better)
Translates to: PKTQPAASSQKPPTP*RGLCREHTYRLQGI
Trigger: AATGCCTTGTAAACGATAGGTGTGCTCTCGACAGAGGCCCCTGCAAGGGGTAGGAGGTTTCTGGGAGGAGGCTGCTGGCTGTGTCTTAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636581.2
CDS-3UTR CAA 90 bp ATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCAGACTCCAGAAGTCTGGTGCCTCTaGCATAGTTTGCCTCGTTCG +
Preference number: 5 (lower is better)
Translates to: MPSVGWAWCPGTWEKQTPEVWCL*HSLPRS
Trigger: CGAACGAGGCAAACTATGCAAGAGGCACCAGACTTC...TGGAGTCTGCTTCTCCCATGTACCAGGGCACCAGGCCCACCCAACTGAAGGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CAA 90 bp GAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTGCGGATCGGGTTGGTCTaGCTAAGAATGAAGAAAGCG +
Preference number: 5 (lower is better)
Translates to: EKQTPQQCPSGQWGRAGLRIGLV*LRMKKA
Trigger: CGCTTTCTTCATTCTTAGCAAGACCAACCCGATCCG...CAGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CAA 90 bp GGAGGTCATGGCGGACTGGCATACAAAAGGAACTCTGTCAGCTCAGCGCCGAGGCCTACGCGGATCGGGTaGGTCTTGCTAAGAATGAAG +
Preference number: 5 (lower is better)
Translates to: GGHGGLAYKRNSVSSAPRPTRIG*VLLRMK
Trigger: CTTCATTCTTAGCAAGACCAACCCGATCCGCGTAGG...CCTCGGCGCTGAGCTGACAGAGTTCCTTTTGTATGCCAGTCCGCCATGACCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR CAA 90 bp CCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCAGAAAGACAAGGATGAGGTaGGTGAAGATGTGGTGGTTG +
Preference number: 5 (lower is better)
Translates to: PPCLQLGGPGALVHGRSRKTRMR*VKMWWL
Trigger: CAACCACCACATCTTCACCAACCTCATCCTTGTCTT...TCTGCTTCTCCCATGTACCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CAA 90 bp GCGCCGAGGGGCCTGTCAGTCTTTGGGAGTTCGGGCAAACTAGGGATGCAGGACTCTTCAGGGTTACTTTaGGCTTCATCCGTACAGCGA +
Preference number: 5 (lower is better)
Translates to: APRGLSVFGSSGKLGMQDSSGLL*ASSVQR
Trigger: TCGCTGTACGGATGAAGCCAAAAGTAACCCTGAAGA...GTCCTGCATCCCTAGTTTGCCCGAACTCCCAAAGACTGACAGGCCCCTCGGCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CAA 90 bp TCCACCTTCCGGAGGAGTGCTTTGCTTGGAAGGGGTCTCCCTGGGGCCTTGGGTATGTCCATGGCATCATaGAACATCTTGGACTGCTCG +
Preference number: 5 (lower is better)
Translates to: STFRRSALLGRGLPGALGMSMAS*NILDCS
Trigger: CGAGCAGTCCAAGATGTTCAATGATGCCATGGACAT...ACCCAAGGCCCCAGGGAGACCCCTTCCAAGCAAAGCACTCCTCCGGAAGGTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CAA 90 bp AGCGCCGAGGGGCCTGTCAGTCTTTGGGAGTTCGGGCAAACTAGGGATGCAGGAATGGCAACTAATCTCTaGCACGCTACCCTGTGTGGA +
Preference number: 5 (lower is better)
Translates to: SAEGPVSLWEFGQTRDAGMATNL*HATLCG
Trigger: TCCACACAGGGTAGCGTGCAAGAGATTAGTTGCCAT...TCCTGCATCCCTAGTTTGCCCGAACTCCCAAAGACTGACAGGCCCCTCGGCGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CAA 90 bp GCTCCGCAGATGAGCCACGGCCCCGCTTCCACCTTCCGGAGGAGTGCTTTGCTTCTTTCCCACCAGTCCTaGTTCTTTCCGTTTCTTGAA +
Preference number: 5 (lower is better)
Translates to: APQMSHGPASTFRRSALLLSHQS*FFPFLE
Trigger: TTCAAGAAACGGAAAGAACAAGGACTGGTGGGAAAG...AAGCAAAGCACTCCTCCGGAAGGTGGAAGCGGGGCCGTGGCTCATCTGCGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CAA 90 bp CGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCACTTCTTCTTCTCGTTTaGTTTCCTCAGGCTCGTCAT +
Preference number: 5 (lower is better)
Translates to: RRHAFSWVGLVPWYMGEALLLLV*FPQARH
Trigger: ATGACGAGCCTGAGGAAACAAAACGAGAAGAAGAAG...TGCTTCTCCCATGTACCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CAA 90 bp GAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTGCACTTGCAGGTGGAATaGAAGGCCTTTGGACATGCA +
Preference number: 5 (lower is better)
Translates to: EKQTPQQCPSGQWGRAGLHLQVE*KAFGHA
Trigger: TGCATGTCCAAAGGCCTTCAATTCCACCTGCAAGTG...CAGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CAA 90 bp GGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCAGACTCCACAGCAGTGCCCATGTTTCTCAGTATCACTaGCAGGTGGAATTGAAGGCC +
Preference number: 5 (lower is better)
Translates to: GGPGALVHGRSRLHSSAHVSQYH*QVELKA
Trigger: GGCCTTCAATTCCACCTGCAAGTGATACTGAGAAAC...ATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTACCAGGGCACCAGGCCCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CAA 90 bp GAAATGGCGCTCCCTGCGGCTGGTATTAGGTTACCATTGGCACCGAAGGAACCACGCAGGCACTCAAAGTaGAAGGAGGATCTCCGGTGG +
Preference number: 5 (lower is better)
Translates to: EMALPAAGIRLPLAPKEPRRHSK*KEDLRW
Trigger: CCACCGGAGATCCTCCTTCAACTTTGAGTGCCTGCG...TGGTTCCTTCGGTGCCAATGGTAACCTAATACCAGCCGCAGGGAGCGCCATTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR CAA 90 bp GTGTATCTGAGCTTCCTGGCCTGTCCACTTCTCACTGTATTCTGGACTGGGTCTGGAGGAGTGCTTTGCTaGGAAGGGGTCTCCCTGGGG +
Preference number: 5 (lower is better)
Translates to: VYLSFLACPLLTVFWTGSGGVLC*EGVSLG
Trigger: CCCCAGGGAGACCCCTTCCAAGCAAAGCACTCCTCC...AGACCCAGTCCAGAATACAGTGAGAAGTGGACAGGCCAGGAAGCTCAGATACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS TCA 90 bp GTGCCCGGCCCAAGGATGCTAGAATGCTGGTGTGGTGGCACTGGGTaGACAGATCCTGCACCTTTAAAACACCAGCTGGAGGGACAACTT +
Preference number: 5 (lower is better)
Translates to: VPGPRMLECWCGGTG*TDPAPLKHQLEGQL
Trigger: AAGTTGTCCCTCCAGCTGGTGTTTTAAAGGTGCAGGATCTGTTCACCCAGTGCCACCACACCAGCATTCTAGCATCCTTGGGCCGGGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636595.1
CDS TCA 90 bp AGCAGCCTGGTGAGGTTAGGACCAAATGTGATGGAGATAAGTCCATaGGTGCTGCCAAACCAGGAACTGAGCGGGGTGTGGGGACATGGG +
Preference number: 5 (lower is better)
Translates to: SSLVRLGPNVMEISP*VLPNQELSGVWGHG
Trigger: CCCATGTCCCCACACCCCGCTCAGTTCCTGGTTTGGCAGCACTCATGGACTTATCTCCATCACATTTGGTCCTAACCTCACCAGGCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637081.1
CDS GCA 90 bp ATACTGTGGGGAGCGCACAGCACTTCAGTGCAAGAACACAAGTCCTaGCAGAACCCCACGACACTTCCCACTGTCACCTTCCAGATACCC +
Preference number: 5 (lower is better)
Translates to: ILWGAHSTSVQEHKS*QNPTTLPTVTFQIP
Trigger: GGGTATCTGGAAGGTGACAGTGGGAAGTGTCGTGGGGTTCTGGCAGGACTTGTGTTCTTGCACTGAAGTGCTGTGCGCTCCCCACAGTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636581.2
CDS-3UTR CAA 90 bp TCATCACCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGAGCATCGATTGCAGCTaGCCAAGACAGGACAGTTTG +
Preference number: 5 (lower is better)
Translates to: SSPLTFPCTPPPCLQLGGSIDCS*PRQDSL
Trigger: CAAACTGTCCTGTCTTGGCAAGCTGCAATCGATGCT...CCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGGTGATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CAA 90 bp TCCCTTTCACGAAAAAGAACCACCGTGAGCAACGTCCGCGACAGGCAGCCCTGGAGCATCGATTGCAGCTaGCCAAGACAGGACAGTTTG +
Preference number: 5 (lower is better)
Translates to: SLSRKRTTVSNVRDRQPWSIDCS*PRQDSL
Trigger: CAAACTGTCCTGTCTTGGCAAGCTGCAATCGATGCT...CCAGGGCTGCCTGTCGCGGACGTTGCTCACGGTGGTTCTTTTTCGTGAAAGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR CAA 90 bp AACCGTAACTATGGATACCCAAGGGGCAGAGCAGCCAGCTGGACCTGCTCTGTAATAGTTTGGGCAGCCTaGGCCTGTCTAGCAGCATCG +
Preference number: 5 (lower is better)
Translates to: NRNYGYPRGRAASWTCSVIVWAA*ACLAAS
Trigger: CGATGCTGCTAGACAGGCCAAGGCTGCCCAAACTAT...TACAGAGCAGGTCCAGCTGGCTGCTCTGCCCCTTGGGTATCCATAGTTACGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR CAA 90 bp CGACACTCCAATCCTATAGATCACCACGTTGCTCCTCTGTCCCCAGCACCCCTTAGAGGTGCTCATAGTTaGGGCAGCCTTGGCCTGTCT +
Preference number: 5 (lower is better)
Translates to: RHSNPIDHHVAPLSPAPLRGAHS*GSLGLS
Trigger: AGACAGGCCAAGGCTGCCCAAACTATGAGCACCTCT...AAGGGGTGCTGGGGACAGAGGAGCAACGTGGTGATCTATAGGATTGGAGTGTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR CAA 90 bp TATCACCCCCAAAATAATCACACCAAATGGCCAAAGGGCTTTCTTTATCAGTTGCCAGAGGGCCCCGCCTaGGCCGCGCCTCTCCGTCTC +
Preference number: 5 (lower is better)
Translates to: YHPQNNHTKWPKGFLYQLPEGPA*AAPLRL
Trigger: GAGACGGAGAGGCGCGGCCAAGGCGGGGCCCTCTGG...CAACTGATAAAGAAAGCCCTTTGGCCATTTGGTGTGATTATTTTGGGGGTGATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000636627.1
CDS-3UTR CAA 90 bp CCTTCCGGAGGAGTGCTTTGCTTGGAAGGGGTCTCCCTGGGGCCTTGGGTCTGCGGTGCTCCGCTTGGTTaGCGTTTCATCAAAATTAAA +
Preference number: 5 (lower is better)
Translates to: PSGGVLCLEGVSLGPWVCGAPLG*RFIKIK
Trigger: TTTAATTTTGATGAAACGCAAACCAAGCGGAGCACC...GCAGACCCAAGGCCCCAGGGAGACCCCTTCCAAGCAAAGCACTCCTCCGGAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR CAA 90 bp ACCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGCACTGTGAGAAGTGCTaGAGGGAAATTGTCAAAGGT +
Preference number: 5 (lower is better)
Translates to: TFNFPLHPAAMPSVGWAWHCEKC*REIVKG
Trigger: ACCTTTGACAATTTCCCTCAAGCACTTCTCACAGTG...CCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CAA 90 bp TCCACCTTCCGGAGGAGTGCTTTGCTTGGAAGGGGTCTCCCTGGGGCCTTGGGTACCTTGTTGTCACTGTaGGCTATCTGGTTGACTTCT +
Preference number: 5 (lower is better)
Translates to: STFRRSALLGRGLPGALGTLLSL*AIWLTS
Trigger: AGAAGTCAACCAGATAGCCAACAGTGACAACAAGGT...ACCCAAGGCCCCAGGGAGACCCCTTCCAAGCAAAGCACTCCTCCGGAAGGTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR CAA 90 bp CCTTCCGGAGGAGTGCTTTGCTTGGAAGGGGTCTCCCTGGGGCCTTGGGTCTGCGGAAAGCTCCAAAAGTaGTCATCTTCAACAGGATCT +
Preference number: 5 (lower is better)
Translates to: PSGGVLCLEGVSLGPWVCGKLQK*SSSTGS
Trigger: AGATCCTGTTGAAGATGACAACTTTTGGAGCTTTCC...GCAGACCCAAGGCCCCAGGGAGACCCCTTCCAAGCAAAGCACTCCTCCGGAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR CAA 90 bp GAGCTTCCTGGCCTGTCCACTTCTCACTGTATTCTGGACTGGGTCTCTGCAGAGCGCGGTGGTTGTAGATaGGGCCGATGTTCTCTCCAT +
Preference number: 5 (lower is better)
Translates to: ELPGLSTSHCILDWVSAERGGCR*GRCSLH
Trigger: ATGGAGAGAACATCGGCCCAATCTACAACCACCGCG...CTCTGCAGAGACCCAGTCCAGAATACAGTGAGAAGTGGACAGGCCAGGAAGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CAA 90 bp GCTCCGCAGATGAGCCACGGCCCCGCTTCCACCTTCCGGAGGAGTGCTTTGCTTACAGCCACAAACAGATaGATGATCAGAAATGCACAG +
Preference number: 5 (lower is better)
Translates to: APQMSHGPASTFRRSALLTATNR*MIRNAQ
Trigger: CTGTGCATTTCTGATCATCAATCTGTTTGTGGCTGT...AAGCAAAGCACTCCTCCGGAAGGTGGAAGCGGGGCCGTGGCTCATCTGCGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CAA 90 bp ACCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGCTTTCCCACCAGTCCTaGTTCTTTCCGTTTCTTGAA +
Preference number: 5 (lower is better)
Translates to: TFNFPLHPAAMPSVGWAWLSHQS*FFPFLE
Trigger: TTCAAGAAACGGAAAGAACAAGGACTGGTGGGAAAG...CCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CAA 90 bp CCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTCTTTCCCACCAGTCCTaGTTCTTTCCGTTTCTTGAA +
Preference number: 5 (lower is better)
Translates to: PLTFPCTPPPCLQLGGPGLSHQS*FFPFLE
Trigger: TTCAAGAAACGGAAAGAACAAGGACTGGTGGGAAAG...ACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CAA 90 bp GGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTCTCAGGCTCGTCATCTaGCAAATCACACGATATAGC +
Preference number: 5 (lower is better)
Translates to: GEADSTAVPIWTMGQGRSLRLVI*QITRYS
Trigger: GCTATATCGTGTGATTTGCAAGATGACGAGCCTGAG...AGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CAA 90 bp ACCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGCTTCTTCTTCTCGTTTaGTTTCCTCAGGCTCGTCAT +
Preference number: 5 (lower is better)
Translates to: TFNFPLHPAAMPSVGWAWLLLLV*FPQARH
Trigger: ATGACGAGCCTGAGGAAACAAAACGAGAAGAAGAAG...CCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CAA 90 bp ATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCAGACTCCACACTTGCAGGTGGAATaGAAGGCCTTTGGACATGCA +
Preference number: 5 (lower is better)
Translates to: MPSVGWAWCPGTWEKQTPHLQVE*KAFGHA
Trigger: TGCATGTCCAAAGGCCTTCAATTCCACCTGCAAGTG...TGGAGTCTGCTTCTCCCATGTACCAGGGCACCAGGCCCACCCAACTGAAGGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CAA 90 bp GGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTGTTTCTCAGTATCACTaGCAGGTGGAATTGAAGGCC +
Preference number: 5 (lower is better)
Translates to: GEADSTAVPIWTMGQGRSVSQYH*QVELKA
Trigger: GGCCTTCAATTCCACCTGCAAGTGATACTGAGAAAC...AGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CAA 90 bp ACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGTAGTAGGCGTCTCCTaGGAGATCTCCGTGAATCAT +
Preference number: 5 (lower is better)
Translates to: TWEKQTPQQCPSGQWGRAVVGVS*EISVNH
Trigger: ATGATTCACGGAGATCTCCAAGGAGACGCCTACTAC...TGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CAA 90 bp TACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCGTAGTAGGCGTCTCCTaGGAGATCTCCGTGAATCAT +
Preference number: 5 (lower is better)
Translates to: YMGEADSTAVPIWTMGQGVVGVS*EISVNH
Trigger: ATGATTCACGGAGATCTCCAAGGAGACGCCTACTAC...GCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CAA 90 bp ACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAACTTCTGGGCTTTACTaGAATCTAGGCCGGCAACTG +
Preference number: 5 (lower is better)
Translates to: TWEKQTPQQCPSGQWGRATSGLY*NLGRQL
Trigger: CAGTTGCCGGCCTAGATTCAAGTAAAGCCCAGAAGT...TGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CAA 90 bp CCTGGTACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCCAAATTTTGGGTCCCTaGCATAGCGTCCCAAGCCTT +
Preference number: 5 (lower is better)
Translates to: PGTWEKQTPQQCPSGQWGQILGP*HSVPSL
Trigger: AAGGCTTGGGACGCTATGCAAGGGACCCAAAATTTG...GCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTACCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CAA 90 bp GAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTGTTGCTGACACAAATTTaGGGTCCCTTGCATAGCGTC +
Preference number: 5 (lower is better)
Translates to: EKQTPQQCPSGQWGRAGLLLTQI*GPLHSV
Trigger: GACGCTATGCAAGGGACCCAAAATTTGTGTCAGCAA...CAGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CAA 90 bp ACTGGCGTCACATCACAGAAAACCTTATTTATGAGGTCCCATTGCCCTCGCAATCCGCCATGCCTTCAGTaGGGTGGGCCTGGTGCCCTG +
Preference number: 5 (lower is better)
Translates to: TGVTSQKTLFMRSHCPRNPPCLQ*GGPGAL
Trigger: CAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGG...ATTGCGAGGGCAATGGGACCTCATAAATAAGGTTTTCTGTGATGTGACGCCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CAA 90 bp GGAGGTCATGGCGGACTGGCATACAAAAGGAACTCTGTCAGCTCAGCGCCGAGGTTGCCTGGATTGGTTTaGGCATGCGGGTGTATGTGT +
Preference number: 5 (lower is better)
Translates to: GGHGGLAYKRNSVSSAPRLPGLV*ACGCMC
Trigger: ACACATACACCCGCATGCCAAAACCAATCCAGGCAA...CCTCGGCGCTGAGCTGACAGAGTTCCTTTTGTATGCCAGTCCGCCATGACCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CAA 90 bp TCCCTTTCACGAAAAAGAACCACCGTGAGCAACGTCCGCGACAGGCAGCCCTGGATGGAACCTGAGGTGTaGCCTGGATTGGTTTTGGCA +
Preference number: 5 (lower is better)
Translates to: SLSRKRTTVSNVRDRQPWMEPEV*PGLVLA
Trigger: TGCCAAAACCAATCCAGGCAACACCTCAGGTTCCAT...CCAGGGCTGCCTGTCGCGGACGTTGCTCACGGTGGTTCTTTTTCGTGAAAGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS TCA 90 bp ACACTAGTCGAAGTGGTCGCAACACTCGAAAGGCACGGAGGGCTTTaGCATCAAAGCCTCCAGATTTGCCGCTTGAGTGGTTCCCGCCTT +
Preference number: 5 (lower is better)
Translates to: TLVEVVATLERHGGL*HQSLQICRLSGSRL
Trigger: AAGGCGGGAACCACTCAAGCGGCAAATCTGGAGGCTTTGATGTCAAAGCCCTCCGTGCCTTTCGAGTGTTGCGACCACTTCGACTAGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636570.1
ENST00000636938.1
ENST00000637424.1
ENST00000640483.1
CDS TCA 90 bp GCTGCACTCAGCCTAGGCTGGCCCTGCACACAGTCGTCTCGCTGGTaGCAAGTTCTGGTTAACCCTTTAGCAGGATTCAGTCTATACCCA +
Preference number: 5 (lower is better)
Translates to: AALSLGWPCTQSSRW*QVLVNPLAGFSLYP
Trigger: TGGGTATAGACTGAATCCTGCTAAAGGGTTAACCAGAACTTGTCACCAGCGAGACGACTGTGTGCAGGGCCAGCCTAGGCTGAGTGCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636629.1
CDS GCA 90 bp GGTGCTCATAGTTTGGGCAGCCTTGGCCTGTCTAGCAGCATCGATTaGAGCTTGCCAAGACAGGACAGTTTGCTTGGAGCTATTCGGCTG +
Preference number: 5 (lower is better)
Translates to: GAHSLGSLGLSSSID*SLPRQDSLLGAIRL
Trigger: CAGCCGAATAGCTCCAAGCAAACTGTCCTGTCTTGGCAAGCTGCAATCGATGCTGCTAGACAGGCCAAGGCTGCCCAAACTATGAGCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636480.1
ENST00000636570.1
ENST00000636938.1
ENST00000637424.1
ENST00000640483.1
CDS GCA 90 bp GTATTGCTGACGTTTTCTTTGGGAGAGAGATCCTACAGGTGGGGGTaGAGAGGTGCTCATAGTTTGGGCAGCCTTGGCCTGTCTAGCAGC +
Preference number: 5 (lower is better)
Translates to: VLLTFSLGERSYRWG*RGAHSLGSLGLSSS
Trigger: GCTGCTAGACAGGCCAAGGCTGCCCAAACTATGAGCACCTCTGCACCCCCACCTGTAGGATCTCTCTCCCAAAGAAAACGTCAGCAATAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636480.1
ENST00000636570.1
ENST00000636938.1
ENST00000637424.1
ENST00000640483.1
CDS GCA 90 bp ACCCCCACTTCCAAGGAACACTGCCTGGTTACTAGTGCTAGGATCTaGCAGGCCAAGAGCTTATGCCCCTGTCTCAGTGACAGTCTTCAG +
Preference number: 5 (lower is better)
Translates to: TPTSKEHCLVTSARI*QAKSLCPCLSDSLQ
Trigger: CTGAAGACTGTCACTGAGACAGGGGCATAAGCTCTTGGCCTGGCAGATCCTAGCACTAGTAACCAGGCAGTGTTCCTTGGAAGTGGGGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636999.2
CDS GCA 90 bp CTTTCCCAAACATCTGAAAGACAGCACCTGCACACGTGGAGAATCTaGAAGGAGCCTGCCAGCAGAGATCTACAGCCACCTGGGCTCTTC +
Preference number: 5 (lower is better)
Translates to: LSQTSERQHLHTWRI*KEPASRDLQPPGLF
Trigger: GAAGAGCCCAGGTGGCTGTAGATCTCTGCTGGCAGGCTCCTTGCAGATTCTCCACGTGTGCAGGTGCTGTCTTTCAGATGTTTGGGAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636595.1
CDS-3UTR CAA 90 bp CCAAGGGGCAGAGCAGCCAGCTGGACCTGCTCTGTAATTCACTTACTTACTTACCTCCAGATTTGCCGCTaGAGTGGTTCCCGCCTTCTG +
Preference number: 5 (lower is better)
Translates to: PRGRAASWTCSVIHLLTYLQICR*SGSRLL
Trigger: CAGAAGGCGGGAACCACTCAAGCGGCAAATCTGGAG...GTAAGTAAGTAAGTGAATTACAGAGCAGGTCCAGCTGGCTGCTCTGCCCCTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR CAA 90 bp CAGACACTTAGGGTCCTGGTCTGGCAATTTTGGCCTGATGTGATGCCACAAGACCTCCAGATTTGCCGCTaGAGTGGTTCCCGCCTTCTG +
Preference number: 5 (lower is better)
Translates to: QTLRVLVWQFWPDVMPQDLQICR*SGSRLL
Trigger: CAGAAGGCGGGAACCACTCAAGCGGCAAATCTGGAG...GTCTTGTGGCATCACATCAGGCCAAAATTGCCAGACCAGGACCCTAAGTGTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR CAA 90 bp GAGCTTCCTGGCCTGTCCACTTCTCACTGTATTCTGGACTGGGTCTCTGCAGAGAAGGCACGGAGGGCTTaGACATCAAAGCCTCCAGAT +
Preference number: 5 (lower is better)
Translates to: ELPGLSTSHCILDWVSAEKARRA*TSKPPD
Trigger: ATCTGGAGGCTTTGATGTCAAAGCCCTCCGTGCCTT...CTCTGCAGAGACCCAGTCCAGAATACAGTGAGAAGTGGACAGGCCAGGAAGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR CAA 90 bp TACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGAGACGAAATATGCTaGGAGGCCCAAGCTGTACAT +
Preference number: 5 (lower is better)
Translates to: YMGEADSTAVPIWTMGQGRDEIC*EAQAVH
Trigger: ATGTACAGCTTGGGCCTCCAAGCATATTTCGTCTCT...GCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CAA 90 bp GAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTGTCAAAGGTGCTCCGCTaGGTTTGCGTTTCATCAAAA +
Preference number: 5 (lower is better)
Translates to: EKQTPQQCPSGQWGRAGLSKVLR*VCVSSK
Trigger: TTTTGATGAAACGCAAACCAAGCGGAGCACCTTTGA...CAGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CAA 90 bp AGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTGGCACTGTGAGAAGTGCTaGAGGGAAATTGTCAAAGGT +
Preference number: 5 (lower is better)
Translates to: RSRLHSSAHLDNGAGQVWHCEKC*REIVKG
Trigger: ACCTTTGACAATTTCCCTCAAGCACTTCTCACAGTG...CCAGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CAA 90 bp GGCCTTAGCCACAAACGCCTTCCGACTAACCAGCTTGGTGCCGTAGCTCAGGCAAAGACAAGGATGAGGTaGGTGAAGATGTGGTGGTTG +
Preference number: 5 (lower is better)
Translates to: GLSHKRLPTNQLGAVAQAKTRMR*VKMWWL
Trigger: CAACCACCACATCTTCACCAACCTCATCCTTGTCTT...TGCCTGAGCTACGGCACCAAGCTGGTTAGTCGGAAGGCGTTTGTGGCTAAGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR CAA 90 bp GTGTATCTGAGCTTCCTGGCCTGTCCACTTCTCACTGTATTCTGGACTGGGTCTAGTCCTTTTGCTCTGTaGATGGCCCTGAGGGGACGC +
Preference number: 5 (lower is better)
Translates to: VYLSFLACPLLTVFWTGSSPFAL*MALRGR
Trigger: GCGTCCCCTCAGGGCCATCAACAGAGCAAAAGGACT...AGACCCAGTCCAGAATACAGTGAGAAGTGGACAGGCCAGGAAGCTCAGATACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CAA 90 bp AGCCACAAACGCCTTCCGACTAACCAGCTTGGTGCCGTAGCTCAGGCAGAAAATCGCGGTGGTTGTAGATaGGGCCGATGTTCTCTCCAT +
Preference number: 5 (lower is better)
Translates to: SHKRLPTNQLGAVAQAENRGGCR*GRCSLH
Trigger: ATGGAGAGAACATCGGCCCAATCTACAACCACCGCG...ATTTTCTGCCTGAGCTACGGCACCAAGCTGGTTAGTCGGAAGGCGTTTGTGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000636938.1
ENST00000638120.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CAA 90 bp TCATCACCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCTCAGGCTCGTCATCTaGCAAATCACACGATATAGC +
Preference number: 5 (lower is better)
Translates to: SSPLTFPCTPPPCLQLGGLRLVI*QITRYS
Trigger: GCTATATCGTGTGATTTGCAAGATGACGAGCCTGAG...CCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGGTGATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CAA 90 bp TCATCACCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGGTTTCTCAGTATCACTaGCAGGTGGAATTGAAGGCC +
Preference number: 5 (lower is better)
Translates to: SSPLTFPCTPPPCLQLGGVSQYH*QVELKA
Trigger: GGCCTTCAATTCCACCTGCAAGTGATACTGAGAAAC...CCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGGTGATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CAA 90 bp TACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCTTGCTGACACAAATTTaGGGTCCCTTGCATAGCGTC +
Preference number: 5 (lower is better)
Translates to: YMGEADSTAVPIWTMGQGLLTQI*GPLHSV
Trigger: GACGCTATGCAAGGGACCCAAAATTTGTGTCAGCAA...GCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CAA 90 bp TACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCCAAAACCAAAGACAGTaGCAACCCATGGTGGATCCA +
Preference number: 5 (lower is better)
Translates to: YMGEADSTAVPIWTMGQGQNQRQ*QPMVDP
Trigger: TGGATCCACCATGGGTTGCAACTGTCTTTGGTTTTG...GCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR CAA 90 bp TTTCAAGGCCTTAGCCACAAACGCCTTCCGACTAACCAGCTTGGTGCCGTAGCTGAGGTGTTGCCTGGATaGGTTTTGGCATGCGGGTGT +
Preference number: 5 (lower is better)
Translates to: FQGLSHKRLPTNQLGAVAEVLPG*VLACGC
Trigger: ACACCCGCATGCCAAAACCAATCCAGGCAACACCTC...AGCTACGGCACCAAGCTGGTTAGTCGGAAGGCGTTTGTGGCTAAGGCCTTGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS TCA 90 bp TCTAGGCCCTGGGGATGGGCTGCATTCTCCAGACTCTTCTGTGGATaGTTAACTGCCCAAACTGGAGTCCTGCCCTGCTATTTCCAGATG +
Preference number: 5 (lower is better)
Translates to: SRPWGWAAFSRLFCG*LTAQTGVLPCYFQM
Trigger: CATCTGGAAATAGCAGGGCAGGACTCCAGTTTGGGCAGTTAATCATCCACAGAAGAGTCTGGAGAATGCAGCCCATCCCCAGGGCCTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636633.2
CDS GCA 90 bp TATTCGGCTGAGAAGTTGGTCCTTCACCAGAAAGAGGAAGTCTGGTaGCTCTTGCATAGTTTGCCTCGTTCGCGTGGTCCGCTTGCTGCT +
Preference number: 5 (lower is better)
Translates to: YSAEKLVLHQKEEVW*LLHSLPRSRGPLAA
Trigger: AGCAGCAAGCGGACCACGCGAACGAGGCAAACTATGCAAGAGGCACCAGACTTCCTCTTTCTGGTGAAGGACCAACTTCTCAGCCGAATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636480.1
ENST00000636570.1
ENST00000636938.1
ENST00000640483.1
CDS GCA 90 bp CTGGGGATGGGCTGCATTCTCCAGACTCTTCTGTGGATGATTAACTaGCCAAACTGGAGTCCTGCCCTGCTATTTCCAGATGGCCAGTGT +
Preference number: 5 (lower is better)
Translates to: LGMGCILQTLLWMIN*PNWSPALLFPDGQC
Trigger: ACACTGGCCATCTGGAAATAGCAGGGCAGGACTCCAGTTTGGGCAGTTAATCATCCACAGAAGAGTCTGGAGAATGCAGCCCATCCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636633.2
CDS GCA 90 bp CATGCAGTGTCCTTAATCCCGCGCTGTAGCAGTGGAGATAAGAGATaGATGTCTCTAGTCGGGACTGGGCCAGGCCATTCATCTTCAGGA +
Preference number: 5 (lower is better)
Translates to: HAVSLIPRCSSGDKR*MSLVGTGPGHSSSG
Trigger: TCCTGAAGATGAATGGCCTGGCCCAGTCCCGACTAGAGACATGCATCTCTTATCTCCACTGCTACAGCGCGGGATTAAGGACACTGCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636629.1
CDS-3UTR CAA 90 bp TCCTGTGGACACGTTAAGATGGAACCTGAGGTGTTGCCTGGATTGGTTTTGGCACTCCAGATTTGCCGCTaGAGTGGTTCCCGCCTTCTG +
Preference number: 5 (lower is better)
Translates to: SCGHVKMEPEVLPGLVLALQICR*SGSRLL
Trigger: CAGAAGGCGGGAACCACTCAAGCGGCAAATCTGGAG...TGCCAAAACCAATCCAGGCAACACCTCAGGTTCCATCTTAACGTGTCCACAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR CAA 90 bp AGCCACAAACGCCTTCCGACTAACCAGCTTGGTGCCGTAGCTCAGGCAGAAAATAAGGCACGGAGGGCTTaGACATCAAAGCCTCCAGAT +
Preference number: 5 (lower is better)
Translates to: SHKRLPTNQLGAVAQAENKARRA*TSKPPD
Trigger: ATCTGGAGGCTTTGATGTCAAAGCCCTCCGTGCCTT...ATTTTCTGCCTGAGCTACGGCACCAAGCTGGTTAGTCGGAAGGCGTTTGTGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR CAA 90 bp CCTGGTACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCATGCTAGTATTTCGTTaGCCTTCCTCTCCTCCTTCT +
Preference number: 5 (lower is better)
Translates to: PGTWEKQTPQQCPSGQWGMLVFR*PSSPPS
Trigger: AGAAGGAGGAGAGGAAGGCAAACGAAATACTAGCAT...GCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTACCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CAA 90 bp GCTCCGCAGATGAGCCACGGCCCCGCTTCCACCTTCCGGAGGAGTGCTTTGCTTAAGCAATCAAACCGGTaGAAAAGAGAGACGAAATAT +
Preference number: 5 (lower is better)
Translates to: APQMSHGPASTFRRSALLKQSNR*KRETKY
Trigger: ATATTTCGTCTCTCTTTTCAACCGGTTTGATTGCTT...AAGCAAAGCACTCCTCCGGAAGGTGGAAGCGGGGCCGTGGCTCATCTGCGGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR CAA 90 bp TACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCACCTTGTTGTCACTGTaGGCTATCTGGTTGACTTCT +
Preference number: 5 (lower is better)
Translates to: YMGEADSTAVPIWTMGQGTLLSL*AIWLTS
Trigger: AGAAGTCAACCAGATAGCCAACAGTGACAACAAGGT...GCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CAA 90 bp GGAGGTCATGGCGGACTGGCATACAAAAGGAACTCTGTCAGCTCAGCGCCGAGGACCTTGTTGTCACTGTaGGCTATCTGGTTGACTTCT +
Preference number: 5 (lower is better)
Translates to: GGHGGLAYKRNSVSSAPRTLLSL*AIWLTS
Trigger: AGAAGTCAACCAGATAGCCAACAGTGACAACAAGGT...CCTCGGCGCTGAGCTGACAGAGTTCCTTTTGTATGCCAGTCCGCCATGACCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR CAA 90 bp CCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCAGATCATCAATTGTAACCTaGTTGTCACTGTTGGCTATC +
Preference number: 5 (lower is better)
Translates to: PPCLQLGGPGALVHGRSRSSIVT*LSLLAI
Trigger: GATAGCCAACAGTGACAACAAGGTTACAATTGATGA...TCTGCTTCTCCCATGTACCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CAA 90 bp ACCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTCATCAATTGTAACCTaGTTGTCACTGTTGGCTATC +
Preference number: 5 (lower is better)
Translates to: TFNFPLHPAAMPSVGWAWSSIVT*LSLLAI
Trigger: GATAGCCAACAGTGACAACAAGGTTACAATTGATGA...CCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CAA 90 bp TTCTTAAGCAGCACCACCAGTCCCCAGAGGACAAGAGCAGCTATATCTCATCCAAGTCCTTTTGCTCTGTaGATGGCCCTGAGGGGACGC +
Preference number: 5 (lower is better)
Translates to: FLSSTTSPQRTRAAISHPSPFAL*MALRGR
Trigger: GCGTCCCCTCAGGGCCATCAACAGAGCAAAAGGACT...TGGATGAGATATAGCTGCTCTTGTCCTCTGGGGACTGGTGGTGCTGCTTAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR CAA 90 bp CCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCAGATTCCTATTGATCTGGTaGTTATCTCTCATGGCAACT +
Preference number: 5 (lower is better)
Translates to: PPCLQLGGPGALVHGRSRFLLIW*LSLMAT
Trigger: AGTTGCCATGAGAGATAACAACCAGATCAATAGGAA...TCTGCTTCTCCCATGTACCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CAA 90 bp TCCACCTTCCGGAGGAGTGCTTTGCTTGGAAGGGGTCTCCCTGGGGCCTTGGGTTTCCTATTGATCTGGTaGTTATCTCTCATGGCAACT +
Preference number: 5 (lower is better)
Translates to: STFRRSALLGRGLPGALGFLLIW*LSLMAT
Trigger: AGTTGCCATGAGAGATAACAACCAGATCAATAGGAA...ACCCAAGGCCCCAGGGAGACCCCTTCCAAGCAAAGCACTCCTCCGGAAGGTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CAA 90 bp GAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTGACAGCCACAAACAGATaGATGATCAGAAATGCACAG +
Preference number: 5 (lower is better)
Translates to: EKQTPQQCPSGQWGRAGLTATNR*MIRNAQ
Trigger: CTGTGCATTTCTGATCATCAATCTGTTTGTGGCTGT...CAGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CAA 90 bp GGCCTTAGCCACAAACGCCTTCCGACTAACCAGCTTGGTGCCGTAGCTCAGGCAGTTTTATCCTTCCCTTaGCCTCAGGGTCATATTCTG +
Preference number: 5 (lower is better)
Translates to: GLSHKRLPTNQLGAVAQAVLSFP*PQGHIL
Trigger: CAGAATATGACCCTGAGGCAAAGGGAAGGATAAAAC...TGCCTGAGCTACGGCACCAAGCTGGTTAGTCGGAAGGCGTTTGTGGCTAAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000636938.1
ENST00000638120.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CAA 90 bp GAAATGGCGCTCCCTGCGGCTGGTATTAGGTTACCATTGGCACCGAAGGAACCAATGGCAACTAATCTCTaGCACGCTACCCTGTGTGGA +
Preference number: 5 (lower is better)
Translates to: EMALPAAGIRLPLAPKEPMATNL*HATLCG
Trigger: TCCACACAGGGTAGCGTGCAAGAGATTAGTTGCCAT...TGGTTCCTTCGGTGCCAATGGTAACCTAATACCAGCCGCAGGGAGCGCCATTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR CAA 90 bp GAAAGTCCGGTAGGAGATGTCGGGCTCGTCTGTGTACCAGGAGCTGCGGTGCAGTTTCCATGGGCAGCTTaGGACATATTGGCATTATTG +
Preference number: 5 (lower is better)
Translates to: ESPVGDVGLVCVPGAAVQFPWAA*DILALL
Trigger: CAATAATGCCAATATGTCCAAAGCTGCCCATGGAAA...CTGCACCGCAGCTCCTGGTACACAGACGAGCCCGACATCTCCTACCGGACTTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636448.1
CDS-3UTR CAA 90 bp GAAATGGCGCTCCCTGCGGCTGGTATTAGGTTACCATTGGCACCGAAGGAACCAGTAGTAGGCGTCTCCTaGGAGATCTCCGTGAATCAT +
Preference number: 5 (lower is better)
Translates to: EMALPAAGIRLPLAPKEPVVGVS*EISVNH
Trigger: ATGATTCACGGAGATCTCCAAGGAGACGCCTACTAC...TGGTTCCTTCGGTGCCAATGGTAACCTAATACCAGCCGCAGGGAGCGCCATTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR CAA 90 bp AACCGTAACTATGGATACCCAAGGGGCAGAGCAGCCAGCTGGACCTGCTCTGTAGTAGTAGGCGTCTCCTaGGAGATCTCCGTGAATCAT +
Preference number: 5 (lower is better)
Translates to: NRNYGYPRGRAASWTCSVVVGVS*EISVNH
Trigger: ATGATTCACGGAGATCTCCAAGGAGACGCCTACTAC...TACAGAGCAGGTCCAGCTGGCTGCTCTGCCCCTTGGGTATCCATAGTTACGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR CAA 90 bp ATGCATATCATTTCATCCGCCAGGTCCTCCTCATCCCTCCCAGGGTCTGGCTCTACTTCTGGGCTTTACTaGAATCTAGGCCGGCAACTG +
Preference number: 5 (lower is better)
Translates to: MHIISSARSSSSLPGSGSTSGLY*NLGRQL
Trigger: CAGTTGCCGGCCTAGATTCAAGTAAAGCCCAGAAGT...AGAGCCAGACCCTGGGAGGGATGAGGAGGACCTGGCGGATGAAATGATATGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636448.1
CDS-3UTR CAA 90 bp TGCAACCCATGGTGGATCCAAAGGTACAGTATCAAAATCATGGAACTCTTGCCCGCCAGGCTCAACCGCTaGGGACCTGTTCCTACCAGG +
Preference number: 5 (lower is better)
Translates to: CNPWWIQRYSIKIMELLPARLNR*GPVPTR
Trigger: CCTGGTAGGAACAGGTCCCAAGCGGTTGAGCCTGGC...GGGCAAGAGTTCCATGATTTTGATACTGTACCTTTGGATCCACCATGGGTTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR CAA 90 bp AAACCGACCATCGGAGTGATATTCTCTTATGTAAACTGGCGTCACATCACAGAACCGCCATGCCTTCAGTaGGGTGGGCCTGGTGCCCTG +
Preference number: 5 (lower is better)
Translates to: KPTIGVIFSYVNWRHITEPPCLQ*GGPGAL
Trigger: CAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGG...TTCTGTGATGTGACGCCAGTTTACATAAGAGAATATCACTCCGATGGTCGGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CAA 90 bp CCTGGTACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCGTCGGCCTAATTCTGTaGACAGAAAATGAAGCCTTG +
Preference number: 5 (lower is better)
Translates to: PGTWEKQTPQQCPSGQWGVGLIL*TENEAL
Trigger: CAAGGCTTCATTTTCTGTCAACAGAATTAGGCCGAC...GCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTACCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR CAA 90 bp AACCGTAACTATGGATACCCAAGGGGCAGAGCAGCCAGCTGGACCTGCTCTGTAGGTATTAGGTTACCATaGGCACCGAAGGAACCAGGA +
Preference number: 5 (lower is better)
Translates to: NRNYGYPRGRAASWTCSVGIRLP*APKEPG
Trigger: TCCTGGTTCCTTCGGTGCCAATGGTAACCTAATACC...TACAGAGCAGGTCCAGCTGGCTGCTCTGCCCCTTGGGTATCCATAGTTACGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR CAA 90 bp TTTCAAGGCCTTAGCCACAAACGCCTTCCGACTAACCAGCTTGGTGCCGTAGCTGCATCTGTAGGGCAATaGTGGTGTTCTTCGCAGGGT +
Preference number: 5 (lower is better)
Translates to: FQGLSHKRLPTNQLGAVAASVGQ*WCSSQG
Trigger: ACCCTGCGAAGAACACCACAATTGCCCTACAGATGC...AGCTACGGCACCAAGCTGGTTAGTCGGAAGGCGTTTGTGGCTAAGGCCTTGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636938.1
ENST00000638120.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CAA 90 bp TCCCTTTCACGAAAAAGAACCACCGTGAGCAACGTCCGCGACAGGCAGCCCTGGTCTCTGAGTCTCTGCTaGGAAGGGAAAACTGTTAAG +
Preference number: 5 (lower is better)
Translates to: SLSRKRTTVSNVRDRQPWSLSLC*EGKTVK
Trigger: CTTAACAGTTTTCCCTTCCAAGCAGAGACTCAGAGA...CCAGGGCTGCCTGTCGCGGACGTTGCTCACGGTGGTTCTTTTTCGTGAAAGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CAA 90 bp CCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTCACCGAATTTCCTGTTaGAACACATCATCTTCTTCT +
Preference number: 5 (lower is better)
Translates to: PLTFPCTPPPCLQLGGPGHRISC*NTSSSS
Trigger: AGAAGAAGATGATGTGTTCAAACAGGAAATTCGGTG...ACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636448.1
CDS GCA 90 bp TTGCCTCACACGTGGCAGCAGGAGAAGGTGCAACACGGATCCGACTaGTTACCCACTAAGGACACCAAGAACCAGGTTAAGGACGAAAAA +
Preference number: 5 (lower is better)
Translates to: LPHTWQQEKVQHGSD*LPTKDTKNQVKDEK
Trigger: TTTTTCGTCCTTAACCTGGTTCTTGGTGTCCTTAGTGGGTAAGCAGTCGGATCCGTGTTGCACCTTCTCCTGCTGCCACGTGTGAGGCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464429.1
CDS GCA 90 bp CACTTTGGACGTGTAAATGTGCCCCATGGCTCTCCCACGGCTGCTTaGTACCAAATCTTCAGTGTGCTGTGTCTCTTGGGGGTAAAGCTT +
Preference number: 5 (lower is better)
Translates to: HFGRVNVPHGSPTAA*YQIFSVLCLLGVKL
Trigger: AAGCTTTACCCCCAAGAGACACAGCACACTGAAGATTTGGTAGCAAGCAGCCGTGGGAGAGCCATGGGGCACATTTACACGTCCAAAGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637589.2
CDS-3UTR CAA 90 bp CAGACACTTAGGGTCCTGGTCTGGCAATTTTGGCCTGATGTGATGCCACAAGACCCAAGACAGGACAGTTaGCTTGGAGCTATTCGGCTG +
Preference number: 5 (lower is better)
Translates to: QTLRVLVWQFWPDVMPQDPRQDS*LGAIRL
Trigger: CAGCCGAATAGCTCCAAGCAAACTGTCCTGTCTTGG...GTCTTGTGGCATCACATCAGGCCAAAATTGCCAGACCAGGACCCTAAGTGTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR CAA 90 bp GCGCCGAGGGGCCTGTCAGTCTTTGGGAGTTCGGGCAAACTAGGGATGCAGGACTTTGTTGGCAATATCTaGAATCTGTGTCAACCAATC +
Preference number: 5 (lower is better)
Translates to: APRGLSVFGSSGKLGMQDFVGNI*NLCQPI
Trigger: GATTGGTTGACACAGATTCAAGATATTGCCAACAAA...GTCCTGCATCCCTAGTTTGCCCGAACTCCCAAAGACTGACAGGCCCCTCGGCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR CAA 90 bp GAGCTTCCTGGCCTGTCCACTTCTCACTGTATTCTGGACTGGGTCTCTGCAGAGAGAGACGAAATATGCTaGGAGGCCCAAGCTGTACAT +
Preference number: 5 (lower is better)
Translates to: ELPGLSTSHCILDWVSAERDEIC*EAQAVH
Trigger: ATGTACAGCTTGGGCCTCCAAGCATATTTCGTCTCT...CTCTGCAGAGACCCAGTCCAGAATACAGTGAGAAGTGGACAGGCCAGGAAGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR CAA 90 bp CTTAAGCAGCACCACCAGTCCCCAGAGGACAAGAGCAGCTATATCTCATCCACCCGGATCGGGTTGGTCTaGCTAAGAATGAAGAAAGCG +
Preference number: 5 (lower is better)
Translates to: LKQHHQSPEDKSSYISSTRIGLV*LRMKKA
Trigger: CGCTTTCTTCATTCTTAGCAAGACCAACCCGATCCG...GGTGGATGAGATATAGCTGCTCTTGTCCTCTGGGGACTGGTGGTGCTGCTTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR CAA 90 bp ACTGACTTTGGAAAAGATCATCGCCTCTATCAGACACTTAGGGTCCTGGTCTGGTGGTGGTTGATGAGCTaGTGGCAGCCTACGCGGATC +
Preference number: 5 (lower is better)
Translates to: TDFGKDHRLYQTLRVLVWWWLMS*WQPTRI
Trigger: GATCCGCGTAGGCTGCCACAAGCTCATCAACCACCA...CCAGACCAGGACCCTAAGTGTCTGATAGAGGCGATGATCTTTTCCAAAGTCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR CAA 90 bp AACCGTAACTATGGATACCCAAGGGGCAGAGCAGCCAGCTGGACCTGCTCTGTAAAGACAAGGATGAGGTaGGTGAAGATGTGGTGGTTG +
Preference number: 5 (lower is better)
Translates to: NRNYGYPRGRAASWTCSVKTRMR*VKMWWL
Trigger: CAACCACCACATCTTCACCAACCTCATCCTTGTCTT...TACAGAGCAGGTCCAGCTGGCTGCTCTGCCCCTTGGGTATCCATAGTTACGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR CAA 90 bp GTGTATCTGAGCTTCCTGGCCTGTCCACTTCTCACTGTATTCTGGACTGGGTCTCTGCAGAAGGCCCCTTaGTGGAGGAAAGCTCCAAAA +
Preference number: 5 (lower is better)
Translates to: VYLSFLACPLLTVFWTGSLQKAP*WRKAPK
Trigger: TTTTGGAGCTTTCCTCCACAAAGGGGCCTTCTGCAG...AGACCCAGTCCAGAATACAGTGAGAAGTGGACAGGCCAGGAAGCTCAGATACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CAA 90 bp GAGCTTCCTGGCCTGTCCACTTCTCACTGTATTCTGGACTGGGTCTCTGCAGAGTCTTCAGGGTTACTTTaGGCTTCATCCGTACAGCGA +
Preference number: 5 (lower is better)
Translates to: ELPGLSTSHCILDWVSAESSGLL*ASSVQR
Trigger: TCGCTGTACGGATGAAGCCAAAAGTAACCCTGAAGA...CTCTGCAGAGACCCAGTCCAGAATACAGTGAGAAGTGGACAGGCCAGGAAGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CAA 90 bp GAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTGTTCCTATTGATCTGGTaGTTATCTCTCATGGCAACT +
Preference number: 5 (lower is better)
Translates to: EKQTPQQCPSGQWGRAGLFLLIW*LSLMAT
Trigger: AGTTGCCATGAGAGATAACAACCAGATCAATAGGAA...CAGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CAA 90 bp CTTAAGCAGCACCACCAGTCCCCAGAGGACAAGAGCAGCTATATCTCATCCACCAGGTTCCCTTCGGTCTaGATCTTAAGAGCCGTTCGA +
Preference number: 5 (lower is better)
Translates to: LKQHHQSPEDKSSYISSTRFPSV*ILRAVR
Trigger: TCGAACGGCTCTTAAGATCAAGACCGAAGGGAACCT...GGTGGATGAGATATAGCTGCTCTTGTCCTCTGGGGACTGGTGGTGCTGCTTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR CAA 90 bp AGCCACAAACGCCTTCCGACTAACCAGCTTGGTGCCGTAGCTCAGGCAGAAAATAGGTTCCCTTCGGTCTaGATCTTAAGAGCCGTTCGA +
Preference number: 5 (lower is better)
Translates to: SHKRLPTNQLGAVAQAENRFPSV*ILRAVR
Trigger: TCGAACGGCTCTTAAGATCAAGACCGAAGGGAACCT...ATTTTCTGCCTGAGCTACGGCACCAAGCTGGTTAGTCGGAAGGCGTTTGTGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000636938.1
ENST00000638120.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CAA 90 bp TTTCAAGGCCTTAGCCACAAACGCCTTCCGACTAACCAGCTTGGTGCCGTAGCTAGGTTCCCTTCGGTCTaGATCTTAAGAGCCGTTCGA +
Preference number: 5 (lower is better)
Translates to: FQGLSHKRLPTNQLGAVARFPSV*ILRAVR
Trigger: TCGAACGGCTCTTAAGATCAAGACCGAAGGGAACCT...AGCTACGGCACCAAGCTGGTTAGTCGGAAGGCGTTTGTGGCTAAGGCCTTGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636938.1
ENST00000638120.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CAA 90 bp CGTATTTCAGAACAGCTAAACAGGAACCAGGACGCAGTGTATTTGGGGGAAAGGCCGCCTGTAGGGCAATaGTGGTGTTCTTCGCAGGGT +
Preference number: 5 (lower is better)
Translates to: RISEQLNRNQDAVYLGERPPVGQ*WCSSQG
Trigger: ACCCTGCGAAGAACACCACAATTGCCCTACAGGCGG...CCTTTCCCCCAAATACACTGCGTCCTGGTTCCTGTTTAGCTGTTCTGAAATACG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CAA 90 bp ACCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGGACATATTGGCATTATaGAGATTGGCATTTGTTGAG +
Preference number: 5 (lower is better)
Translates to: TFNFPLHPAAMPSVGWAWDILAL*RLAFVE
Trigger: CTCAACAAATGCCAATCTCAATAATGCCAATATGTC...CCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CAA 90 bp ATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCAGACTCCATTTCCATGGGCAGCTTaGGACATATTGGCATTATTG +
Preference number: 5 (lower is better)
Translates to: MPSVGWAWCPGTWEKQTPFPWAA*DILALL
Trigger: CAATAATGCCAATATGTCCAAAGCTGCCCATGGAAA...TGGAGTCTGCTTCTCCCATGTACCAGGGCACCAGGCCCACCCAACTGAAGGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CAA 90 bp TTCTTAAGCAGCACCACCAGTCCCCAGAGGACAAGAGCAGCTATATCTCATCCATGCTTGTCGCTGTTTTaGTTCCGGAAGCTGCTGGGG +
Preference number: 5 (lower is better)
Translates to: FLSSTTSPQRTRAAISHPCLSLF*FRKLLG
Trigger: CCCCAGCAGCTTCCGGAACAAAAACAGCGACAAGCA...TGGATGAGATATAGCTGCTCTTGTCCTCTGGGGACTGGTGGTGCTGCTTAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR CAA 90 bp GAAATGGCGCTCCCTGCGGCTGGTATTAGGTTACCATTGGCACCGAAGGAACCATTGCTGACACAAATTTaGGGTCCCTTGCATAGCGTC +
Preference number: 5 (lower is better)
Translates to: EMALPAAGIRLPLAPKEPLLTQI*GPLHSV
Trigger: GACGCTATGCAAGGGACCCAAAATTTGTGTCAGCAA...TGGTTCCTTCGGTGCCAATGGTAACCTAATACCAGCCGCAGGGAGCGCCATTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR CAA 90 bp ATGCATATCATTTCATCCGCCAGGTCCTCCTCATCCCTCCCAGGGTCTGGCTCTTTGCTGACACAAATTTaGGGTCCCTTGCATAGCGTC +
Preference number: 5 (lower is better)
Translates to: MHIISSARSSSSLPGSGSLLTQI*GPLHSV
Trigger: GACGCTATGCAAGGGACCCAAAATTTGTGTCAGCAA...AGAGCCAGACCCTGGGAGGGATGAGGAGGACCTGGCGGATGAAATGATATGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636448.1
CDS-3UTR CAA 90 bp AGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTGGCGATTTCGTGTTTTGTaGCTGACACAAATTTTGGGT +
Preference number: 5 (lower is better)
Translates to: RSRLHSSAHLDNGAGQVWRFRVL*LTQILG
Trigger: ACCCAAAATTTGTGTCAGCAACAAAACACGAAATCG...CCAGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CAA 90 bp ACTTACTTACTTACCAGAGGGTGGTTCAAGTCAAACAAACAAAACCAAAGACAGGGGCCCACATCCCCGTaGGCTCGGGGACGCACGTTC +
Preference number: 5 (lower is better)
Translates to: TYLLTRGWFKSNKQNQRQGPTSP*ARGRTF
Trigger: GAACGTGCGTCCCCGAGCCAACGGGGATGTGGGCCC...CTGTCTTTGGTTTTGTTTGTTTGACTTGAACCACCCTCTGGTAAGTAAGTAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR CAA 90 bp ATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTAAGTTTACCTGGTaGCGAGTGCATTATTATTCC +
Preference number: 5 (lower is better)
Translates to: MGEADSTAVPIWTMGQGRSKFTW*RVHYYS
Trigger: GGAATAATAATGCACTCGCAACCAGGTAAACTTAGA...CCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CAA 90 bp AGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTGGTCAGCCCTCATTCAATaGCATATAAAAGCCCTCAAA +
Preference number: 5 (lower is better)
Translates to: RSRLHSSAHLDNGAGQVWSALIQ*HIKALK
Trigger: TTTGAGGGCTTTTATATGCAATTGAATGAGGGCTGA...CCAGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR CAA 90 bp AGCCACAAACGCCTTCCGACTAACCAGCTTGGTGCCGTAGCTCAGGCAGAAAATTTGCCTGGATTGGTTTaGGCATGCGGGTGTATGTGT +
Preference number: 5 (lower is better)
Translates to: SHKRLPTNQLGAVAQAENLPGLV*ACGCMC
Trigger: ACACATACACCCGCATGCCAAAACCAATCCAGGCAA...ATTTTCTGCCTGAGCTACGGCACCAAGCTGGTTAGTCGGAAGGCGTTTGTGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CAA 90 bp TCCTGTGGACACGTTAAGATGGAACCTGAGGTGTTGCCTGGATTGGTTTTGGCAGAGGTGTTGCCTGGATaGGTTTTGGCATGCGGGTGT +
Preference number: 5 (lower is better)
Translates to: SCGHVKMEPEVLPGLVLAEVLPG*VLACGC
Trigger: ACACCCGCATGCCAAAACCAATCCAGGCAACACCTC...TGCCAAAACCAATCCAGGCAACACCTCAGGTTCCATCTTAACGTGTCCACAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS TCA 90 bp GAGAGCACACCTATCGTTTACAAGGCATTTCTATGGCTCCTATCTTaGCCGCTGCTTTTCTCGGATCACAGGGCCTCCTTTCTCAGCCCT +
Preference number: 5 (lower is better)
Translates to: ESTPIVYKAFLWLLS*PLLFSDHRASFLSP
Trigger: AGGGCTGAGAAAGGAGGCCCTGTGATCCGAGAAAAGCAGCGGTCAAGATAGGAGCCATAGAAATGCCTTGTAAACGATAGGTGTGCTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636581.2
CDS GCA 90 bp CAATCCAAAAGCAACACACTGAGAGGACATCAGAGTCCAAACACATaGAGAGAAGCTGTCAGGGAGCAGCTAGGAGACACGCAGAGTTGC +
Preference number: 5 (lower is better)
Translates to: QSKSNTLRGHQSPNT*REAVREQLGDTQSC
Trigger: GCAACTCTGCGTGTCTCCTAGCTGCTCCCTGACAGCTTCTCTGCATGTGTTTGGACTCTGATGTCCTCTCAGTGTGTTGCTTTTGGATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464429.1
CDS GCA 90 bp AAACCACTTTGGACGTGTAAATGTGCCCCATGGCTCTCCCACGGCTaGTTGCTACCAAATCTTCAGTGTGCTGTGTCTCTTGGGGGTAAA +
Preference number: 5 (lower is better)
Translates to: KPLWTCKCAPWLSHG*LLPNLQCAVSLGGK
Trigger: TTTACCCCCAAGAGACACAGCACACTGAAGATTTGGTAGCAAGCAGCCGTGGGAGAGCCATGGGGCACATTTACACGTCCAAAGTGGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637589.2
CDS-3UTR CAA 90 bp AGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTGGTATACATGTAATTTTTaGCTGCAAAGGAGAACTGGC +
Preference number: 5 (lower is better)
Translates to: RSRLHSSAHLDNGAGQVWYTCNF*LQRRTG
Trigger: GCCAGTTCTCCTTTGCAGCAAAAAATTACATGTATA...CCAGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR CAA 90 bp TATCCAAAAGTGGGTTTTCATCAGGACGTACAGTCAGAGTGTGAGTGCATTCTAGTTCGCGTGGTCCGCTaGCTGCTGCCGTTGATGCTG +
Preference number: 5 (lower is better)
Translates to: YPKVGFHQDVQSECECILVRVVR*LLPLML
Trigger: CAGCATCAACGGCAGCAGCAAGCGGACCACGCGAAC...TAGAATGCACTCACACTCTGACTGTACGTCCTGATGAAAACCCACTTTTGGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR CAA 90 bp TTCTTAAGCAGCACCACCAGTCCCCAGAGGACAAGAGCAGCTATATCTCATCCAGAAGTCTGGTGCCTCTaGCATAGTTTGCCTCGTTCG +
Preference number: 5 (lower is better)
Translates to: FLSSTTSPQRTRAAISHPEVWCL*HSLPRS
Trigger: CGAACGAGGCAAACTATGCAAGAGGCACCAGACTTC...TGGATGAGATATAGCTGCTCTTGTCCTCTGGGGACTGGTGGTGCTGCTTAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR CAA 90 bp TTTCAAGGCCTTAGCCACAAACGCCTTCCGACTAACCAGCTTGGTGCCGTAGCTTTGCTGACGTTTTCTTaGGGAGAGAGATCCTACAGG +
Preference number: 5 (lower is better)
Translates to: FQGLSHKRLPTNQLGAVALLTFS*GERSYR
Trigger: CCTGTAGGATCTCTCTCCCAAAGAAAACGTCAGCAA...AGCTACGGCACCAAGCTGGTTAGTCGGAAGGCGTTTGTGGCTAAGGCCTTGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR CAA 90 bp TGCAACCCATGGTGGATCCAAAGGTACAGTATCAAAATCATGGAACTCTTGCCCCGGGCAGGTCGGCTGTaGGACGAGTTACCCTGTTTT +
Preference number: 5 (lower is better)
Translates to: CNPWWIQRYSIKIMELLPRAGRL*DELPCF
Trigger: AAAACAGGGTAACTCGTCCAACAGCCGACCTGCCCG...GGGCAAGAGTTCCATGATTTTGATACTGTACCTTTGGATCCACCATGGGTTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR CAA 90 bp ACTGGCGTCACATCACAGAAAACCTTATTTATGAGGTCCCATTGCCCTCGCAATCTCCAGATTTGCCGCTaGAGTGGTTCCCGCCTTCTG +
Preference number: 5 (lower is better)
Translates to: TGVTSQKTLFMRSHCPRNLQICR*SGSRLL
Trigger: CAGAAGGCGGGAACCACTCAAGCGGCAAATCTGGAG...ATTGCGAGGGCAATGGGACCTCATAAATAAGGTTTTCTGTGATGTGACGCCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CAA 90 bp CACTCTCTGGACTTTCTGGAGACACTAGCATTAAAACCAAAGCACTGGCCAAGGCTACATTCCGTGCCATaGGCAGTACACTGGCGTCCA +
Preference number: 5 (lower is better)
Translates to: HSLDFLETLALKPKHWPRLHSVP*AVHWRP
Trigger: TGGACGCCAGTGTACTGCCAATGGCACGGAATGTAG...CCTTGGCCAGTGCTTTGGTTTTAATGCTAGTGTCTCCAGAAAGTCCAGAGAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636627.1
CDS-3UTR CAA 90 bp GTGTTTCCTGTGGACACGTTAAGATGGAACCTGAGGTGTTGCCTGGATTGGTTTCTACATTCCGTGCCATaGGCAGTACACTGGCGTCCA +
Preference number: 5 (lower is better)
Translates to: VFPVDTLRWNLRCCLDWFLHSVP*AVHWRP
Trigger: TGGACGCCAGTGTACTGCCAATGGCACGGAATGTAG...AAACCAATCCAGGCAACACCTCAGGTTCCATCTTAACGTGTCCACAGGAAACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR CAA 90 bp GGTTCCCTGACTCCCAGTGTCCTTGAAACTAGACCACACTGCTTCCAAAGAGGCAGAGACGAAATATGCTaGGAGGCCCAAGCTGTACAT +
Preference number: 5 (lower is better)
Translates to: GSLTPSVLETRPHCFQRGRDEIC*EAQAVH
Trigger: ATGTACAGCTTGGGCCTCCAAGCATATTTCGTCTCT...GCCTCTTTGGAAGCAGTGTGGTCTAGTTTCAAGGACACTGGGAGTCAGGGAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636938.1
CDS-3UTR CAA 90 bp GAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTGAAGCAATCAAACCGGTaGAAAAGAGAGACGAAATAT +
Preference number: 5 (lower is better)
Translates to: EKQTPQQCPSGQWGRAGLKQSNR*KRETKY
Trigger: ATATTTCGTCTCTCTTTTCAACCGGTTTGATTGCTT...CAGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CAA 90 bp ATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGAAGCAATCAAACCGGTaGAAAAGAGAGACGAAATAT +
Preference number: 5 (lower is better)
Translates to: MGEADSTAVPIWTMGQGRKQSNR*KRETKY
Trigger: ATATTTCGTCTCTCTTTTCAACCGGTTTGATTGCTT...CCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CAA 90 bp TCCCTTTCACGAAAAAGAACCACCGTGAGCAACGTCCGCGACAGGCAGCCCTGGTCATCAATTGTAACCTaGTTGTCACTGTTGGCTATC +
Preference number: 5 (lower is better)
Translates to: SLSRKRTTVSNVRDRQPWSSIVT*LSLLAI
Trigger: GATAGCCAACAGTGACAACAAGGTTACAATTGATGA...CCAGGGCTGCCTGTCGCGGACGTTGCTCACGGTGGTTCTTTTTCGTGAAAGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR CAA 90 bp CAGTCCCCAGAGGACAAGAGCAGCTATATCTCATCCACCTATGCATTTCTGCACGTGAAGATGTGGTGGTaGATGAGCTTGTGGCAGCCT +
Preference number: 5 (lower is better)
Translates to: QSPEDKSSYISSTYAFLHVKMWW*MSLWQP
Trigger: AGGCTGCCACAAGCTCATCAACCACCACATCTTCAC...GTGCAGAAATGCATAGGTGGATGAGATATAGCTGCTCTTGTCCTCTGGGGACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR CAA 90 bp CACCAGTCCCCAGAGGACAAGAGCAGCTATATCTCATCCACCTATGCATTTCTGGTGAAGATGTGGTGGTaGATGAGCTTGTGGCAGCCT +
Preference number: 5 (lower is better)
Translates to: HQSPEDKSSYISSTYAFLVKMWW*MSLWQP
Trigger: AGGCTGCCACAAGCTCATCAACCACCACATCTTCAC...CAGAAATGCATAGGTGGATGAGATATAGCTGCTCTTGTCCTCTGGGGACTGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR CAA 90 bp AGCCACAAACGCCTTCCGACTAACCAGCTTGGTGCCGTAGCTCAGGCAGAAAATATGTCCATGGCATCATaGAACATCTTGGACTGCTCG +
Preference number: 5 (lower is better)
Translates to: SHKRLPTNQLGAVAQAENMSMAS*NILDCS
Trigger: CGAGCAGTCCAAGATGTTCAATGATGCCATGGACAT...ATTTTCTGCCTGAGCTACGGCACCAAGCTGGTTAGTCGGAAGGCGTTTGTGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000636938.1
ENST00000638120.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CAA 90 bp TACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCTTCCTATTGATCTGGTaGTTATCTCTCATGGCAACT +
Preference number: 5 (lower is better)
Translates to: YMGEADSTAVPIWTMGQGFLLIW*LSLMAT
Trigger: AGTTGCCATGAGAGATAACAACCAGATCAATAGGAA...GCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CAA 90 bp TACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAACGTCTGGAAGTTATaGTTCCTATTGATCTGGTTG +
Preference number: 5 (lower is better)
Translates to: YMGEADSTAVPIWTMGQGNVWKL*FLLIWL
Trigger: CAACCAGATCAATAGGAACAATAACTTCCAGACGTT...GCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CAA 90 bp ATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCAGACTCCAAACGTCTGGAAGTTATaGTTCCTATTGATCTGGTTG +
Preference number: 5 (lower is better)
Translates to: MPSVGWAWCPGTWEKQTPNVWKL*FLLIWL
Trigger: CAACCAGATCAATAGGAACAATAACTTCCAGACGTT...TGGAGTCTGCTTCTCCCATGTACCAGGGCACCAGGCCCACCCAACTGAAGGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CAA 90 bp CCAAGGGGCAGAGCAGCCAGCTGGACCTGCTCTGTAATTCACTTACTTACTTACAGGTTCCCTTCGGTCTaGATCTTAAGAGCCGTTCGA +
Preference number: 5 (lower is better)
Translates to: PRGRAASWTCSVIHLLTYRFPSV*ILRAVR
Trigger: TCGAACGGCTCTTAAGATCAAGACCGAAGGGAACCT...GTAAGTAAGTAAGTGAATTACAGAGCAGGTCCAGCTGGCTGCTCTGCCCCTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR CAA 90 bp GACTTACTTACACACCGTATTTCAGAACAGCTAAACAGGAACCAGGACGCAGTGCCGCCTGTAGGGCAATaGTGGTGTTCTTCGCAGGGT +
Preference number: 5 (lower is better)
Translates to: DLLTHRISEQLNRNQDAVPPVGQ*WCSSQG
Trigger: ACCCTGCGAAGAACACCACAATTGCCCTACAGGCGG...CACTGCGTCCTGGTTCCTGTTTAGCTGTTCTGAAATACGGTGTGTAAGTAAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CAA 90 bp TATTTCAGAACAGCTAAACAGGAACCAGGACGCAGTGTATTTGGGGGAAAGGGTCCGCCTGTAGGGCAATaGTGGTGTTCTTCGCAGGGT +
Preference number: 5 (lower is better)
Translates to: YFRTAKQEPGRSVFGGKGPPVGQ*WCSSQG
Trigger: ACCCTGCGAAGAACACCACAATTGCCCTACAGGCGG...ACCCTTTCCCCCAAATACACTGCGTCCTGGTTCCTGTTTAGCTGTTCTGAAATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CAA 90 bp CTTAAGCAGCACCACCAGTCCCCAGAGGACAAGAGCAGCTATATCTCATCCACCCTCAGGCTCGTCATCTaGCAAATCACACGATATAGC +
Preference number: 5 (lower is better)
Translates to: LKQHHQSPEDKSSYISSTLRLVI*QITRYS
Trigger: GCTATATCGTGTGATTTGCAAGATGACGAGCCTGAG...GGTGGATGAGATATAGCTGCTCTTGTCCTCTGGGGACTGGTGGTGCTGCTTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR CAA 90 bp ATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGGACATATTGGCATTATaGAGATTGGCATTTGTTGAG +
Preference number: 5 (lower is better)
Translates to: MGEADSTAVPIWTMGQGRDILAL*RLAFVE
Trigger: CTCAACAAATGCCAATCTCAATAATGCCAATATGTC...CCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CAA 90 bp GGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTGACATATTGGCATTATaGAGATTGGCATTTGTTGAG +
Preference number: 5 (lower is better)
Translates to: GEADSTAVPIWTMGQGRSDILAL*RLAFVE
Trigger: CTCAACAAATGCCAATCTCAATAATGCCAATATGTC...AGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CAA 90 bp CCTGGTACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCCAGCGATTTCGTGTTTaGTTGCTGACACAAATTTTG +
Preference number: 5 (lower is better)
Translates to: PGTWEKQTPQQCPSGQWGQRFRV*LLTQIL
Trigger: CAAAATTTGTGTCAGCAACAAAACACGAAATCGCTG...GCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTACCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CAA 90 bp ACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCATTAAAAATGGATATGTaGGGCCCAGTGACTGATATG +
Preference number: 5 (lower is better)
Translates to: TWEKQTPQQCPSGQWGRALKMDM*GPVTDM
Trigger: CATATCAGTCACTGGGCCCAACATATCCATTTTTAA...TGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CAA 90 bp ATACCCAAGGGGCAGAGCAGCCAGCTGGACCTGCTCTGTAATTCACTTACTTACAGGCAACAATACGATTaGTACAGACCCCGACACTCC +
Preference number: 5 (lower is better)
Translates to: IPKGQSSQLDLLCNSLTYRQQYD*YRPRHS
Trigger: GGAGTGTCGGGGTCTGTACAAATCGTATTGTTGCCT...GTAAGTAAGTGAATTACAGAGCAGGTCCAGCTGGCTGCTCTGCCCCTTGGGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR CAA 90 bp AGGTTTGGGTGTGGTGGTGTTTCCTGTGGACACGTTAAGATGGAACCTGAGGTGTTGCCTGGATTGGTTTaGGCATGCGGGTGTATGTGT +
Preference number: 5 (lower is better)
Translates to: RFGCGGVSCGHVKMEPEVLPGLV*ACGCMC
Trigger: ACACATACACCCGCATGCCAAAACCAATCCAGGCAA...CACCTCAGGTTCCATCTTAACGTGTCCACAGGAAACACCACCACACCCAAACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000645528.2
CDS-3UTR CAA 90 bp AATGTTGATCTTAAAACCCAAACTGGCCACTTTGGGTGTCTTGGGCTCAGCATCCCCAAACTGGCCACTTaGGGTGTCTTGGGCTCAGCA +
Preference number: 5 (lower is better)
Translates to: NVDLKTQTGHFGCLGLSIPKLAT*GVLGSA
Trigger: TGCTGAGCCCAAGACACCCAAAGTGGCCAGTTTGGG...GATGCTGAGCCCAAGACACCCAAAGTGGCCAGTTTGGGTTTTAAGATCAACATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636938.1
CDS-3UTR CAA 90 bp AGCGCCGAGGGGCCTGTCAGTCTTTGGGAGTTCGGGCAAACTAGGGATGCAGGATGCACTATGGCTACTTaGAATGTTGATCTTAAAACC +
Preference number: 5 (lower is better)
Translates to: SAEGPVSLWEFGQTRDAGCTMAT*NVDLKT
Trigger: GGTTTTAAGATCAACATTCAAAGTAGCCATAGTGCA...TCCTGCATCCCTAGTTTGCCCGAACTCCCAAAGACTGACAGGCCCCTCGGCGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636938.1
CDS TCA 90 bp ATTGCAGCTTGCCAAGACAGGACAGTTTGCTTGGAGCTATTCGGCTaGGAAGTTGGTCCTTCACCAGAAAGAGGAAGTCTGGTGCCTCTT +
Preference number: 5 (lower is better)
Translates to: IAACQDRTVCLELFG*EVGPSPERGSLVPL
Trigger: AAGAGGCACCAGACTTCCTCTTTCTGGTGAAGGACCAACTTCTCAGCCGAATAGCTCCAAGCAAACTGTCCTGTCTTGGCAAGCTGCAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636480.1
ENST00000636570.1
ENST00000636938.1
ENST00000637424.1
ENST00000640483.1
CDS GCA 90 bp CACCTATCGTTTACAAGGCATTTCTATGGCTCCTATCTTGACCGCTaGTTTTCTCGGATCACAGGGCCTCCTTTCTCAGCCCTGGCAAAA +
Preference number: 5 (lower is better)
Translates to: HLSFTRHFYGSYLDR*FSRITGPPFSALAK
Trigger: TTTTGCCAGGGCTGAGAAAGGAGGCCCTGTGATCCGAGAAAAGCAGCGGTCAAGATAGGAGCCATAGAAATGCCTTGTAAACGATAGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636581.2
CDS-3UTR CAA 90 bp GGCCTTAGCCACAAACGCCTTCCGACTAACCAGCTTGGTGCCGTAGCTCAGGCATATACATGTAATTTTTaGCTGCAAAGGAGAACTGGC +
Preference number: 5 (lower is better)
Translates to: GLSHKRLPTNQLGAVAQAYTCNF*LQRRTG
Trigger: GCCAGTTCTCCTTTGCAGCAAAAAATTACATGTATA...TGCCTGAGCTACGGCACCAAGCTGGTTAGTCGGAAGGCGTTTGTGGCTAAGGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636938.1
CDS-3UTR CAA 90 bp GCTGTTTCAGTAGAAATAAGCCCACTTGAGACTTTTCCCTTTCAAGGCCTTAGCTGCCTCTTGCATAGTTaGCCTCGTTCGCGTGGTCCG +
Preference number: 5 (lower is better)
Translates to: AVSVEISPLETFPFQGLSCLLHS*PRSRGP
Trigger: CGGACCACGCGAACGAGGCAAACTATGCAAGAGGCA...GCTAAGGCCTTGAAAGGGAAAAGTCTCAAGTGGGCTTATTTCTACTGAAACAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR CAA 90 bp GTGTTTCCTGTGGACACGTTAAGATGGAACCTGAGGTGTTGCCTGGATTGGTTTCCAAGACAGGACAGTTaGCTTGGAGCTATTCGGCTG +
Preference number: 5 (lower is better)
Translates to: VFPVDTLRWNLRCCLDWFPRQDS*LGAIRL
Trigger: CAGCCGAATAGCTCCAAGCAAACTGTCCTGTCTTGG...AAACCAATCCAGGCAACACCTCAGGTTCCATCTTAACGTGTCCACAGGAAACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR CAA 90 bp TGTACAGACTCCAACCACCACTTGGAATCAGCTGAGAATTCAAGATCAGACACCATAGTTTGGGCAGCCTaGGCCTGTCTAGCAGCATCG +
Preference number: 5 (lower is better)
Translates to: CTDSNHHLESAENSRSDTIVWAA*ACLAAS
Trigger: CGATGCTGCTAGACAGGCCAAGGCTGCCCAAACTAT...GGTGTCTGATCTTGAATTCTCAGCTGATTCCAAGTGGTGGTTGGAGTCTGTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636938.1
CDS-3UTR CAA 90 bp CAGGACTTTGGAATGGAGTCAGATACCCACCTTAGGCAGGTCTGCTTAATCTTTATAGTTTGGGCAGCCTaGGCCTGTCTAGCAGCATCG +
Preference number: 5 (lower is better)
Translates to: QDFGMESDTHLRQVCLIFIVWAA*ACLAAS
Trigger: CGATGCTGCTAGACAGGCCAAGGCTGCCCAAACTAT...AAAGATTAAGCAGACCTGCCTAAGGTGGGTATCTGACTCCATTCCAAAGTCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR CAA 90 bp GACAGTTGCAACCCATGGTGGATCCAAAGGTACAGTATCAAAATCATGGAACTCCGGGCAGGTCGGCTGTaGGACGAGTTACCCTGTTTT +
Preference number: 5 (lower is better)
Translates to: DSCNPWWIQRYSIKIMELRAGRL*DELPCF
Trigger: AAAACAGGGTAACTCGTCCAACAGCCGACCTGCCCG...GAGTTCCATGATTTTGATACTGTACCTTTGGATCCACCATGGGTTGCAACTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR CAA 90 bp TTTCCTGTGGACACGTTAAGATGGAACCTGAGGTGTTGCCTGGATTGGTTTTGGCTACATCTTCTGCGATaGAATCGGTTCCAGCGACGC +
Preference number: 5 (lower is better)
Translates to: FPVDTLRWNLRCCLDWFWLHLLR*NRFQRR
Trigger: GCGTCGCTGGAACCGATTCAATCGCAGAAGATGTAG...CCAAAACCAATCCAGGCAACACCTCAGGTTCCATCTTAACGTGTCCACAGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR CAA 90 bp GTTAAGCTTTGTACGTTCCCTTTCACGAAAAAGAACCACCGTGAGCAACGTCCGCTACATCTTCTGCGATaGAATCGGTTCCAGCGACGC +
Preference number: 5 (lower is better)
Translates to: VKLCTFPFTKKNHREQRPLHLLR*NRFQRR
Trigger: GCGTCGCTGGAACCGATTCAATCGCAGAAGATGTAG...CGGACGTTGCTCACGGTGGTTCTTTTTCGTGAAAGGGAACGTACAAAGCTTAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR CAA 90 bp GGAGGTCATGGCGGACTGGCATACAAAAGGAACTCTGTCAGCTCAGCGCCGAGGTTTGTTGGCAATATCTaGAATCTGTGTCAACCAATC +
Preference number: 5 (lower is better)
Translates to: GGHGGLAYKRNSVSSAPRFVGNI*NLCQPI
Trigger: GATTGGTTGACACAGATTCAAGATATTGCCAACAAA...CCTCGGCGCTGAGCTGACAGAGTTCCTTTTGTATGCCAGTCCGCCATGACCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR CAA 90 bp TTTCAAGGCCTTAGCCACAAACGCCTTCCGACTAACCAGCTTGGTGCCGTAGCTCACTGTGAGAAGTGCTaGAGGGAAATTGTCAAAGGT +
Preference number: 5 (lower is better)
Translates to: FQGLSHKRLPTNQLGAVAHCEKC*REIVKG
Trigger: ACCTTTGACAATTTCCCTCAAGCACTTCTCACAGTG...AGCTACGGCACCAAGCTGGTTAGTCGGAAGGCGTTTGTGGCTAAGGCCTTGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR CAA 90 bp AGCCACAAACGCCTTCCGACTAACCAGCTTGGTGCCGTAGCTCAGGCAGAAAATCACTGTGAGAAGTGCTaGAGGGAAATTGTCAAAGGT +
Preference number: 5 (lower is better)
Translates to: SHKRLPTNQLGAVAQAENHCEKC*REIVKG
Trigger: ACCTTTGACAATTTCCCTCAAGCACTTCTCACAGTG...ATTTTCTGCCTGAGCTACGGCACCAAGCTGGTTAGTCGGAAGGCGTTTGTGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR CAA 90 bp AACCGTAACTATGGATACCCAAGGGGCAGAGCAGCCAGCTGGACCTGCTCTGTATCAATTGTAACCTTGTaGTCACTGTTGGCTATCTGG +
Preference number: 5 (lower is better)
Translates to: NRNYGYPRGRAASWTCSVSIVTL*SLLAIW
Trigger: CCAGATAGCCAACAGTGACAACAAGGTTACAATTGA...TACAGAGCAGGTCCAGCTGGCTGCTCTGCCCCTTGGGTATCCATAGTTACGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR CAA 90 bp TGCAAACACTCTCTGGACTTTCTGGAGACACTAGCATTAAAACCAAAGCACTGGTGGTGGTTGATGAGCTaGTGGCAGCCTACGCGGATC +
Preference number: 5 (lower is better)
Translates to: CKHSLDFLETLALKPKHWWWLMS*WQPTRI
Trigger: GATCCGCGTAGGCTGCCACAAGCTCATCAACCACCA...CCAGTGCTTTGGTTTTAATGCTAGTGTCTCCAGAAAGTCCAGAGAGTGTTTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636627.1
CDS-3UTR CAA 90 bp TGCAAACACTCTCTGGACTTTCTGGAGACACTAGCATTAAAACCAAAGCACTGGAGTCCTTTTGCTCTGTaGATGGCCCTGAGGGGACGC +
Preference number: 5 (lower is better)
Translates to: CKHSLDFLETLALKPKHWSPFAL*MALRGR
Trigger: GCGTCCCCTCAGGGCCATCAACAGAGCAAAAGGACT...CCAGTGCTTTGGTTTTAATGCTAGTGTCTCCAGAAAGTCCAGAGAGTGTTTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000636627.1
CDS-3UTR CAA 90 bp GAAATGGCGCTCCCTGCGGCTGGTATTAGGTTACCATTGGCACCGAAGGAACCAACAGCCACAAACAGATaGATGATCAGAAATGCACAG +
Preference number: 5 (lower is better)
Translates to: EMALPAAGIRLPLAPKEPTATNR*MIRNAQ
Trigger: CTGTGCATTTCTGATCATCAATCTGTTTGTGGCTGT...TGGTTCCTTCGGTGCCAATGGTAACCTAATACCAGCCGCAGGGAGCGCCATTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR CAA 90 bp TTTCAAGGCCTTAGCCACAAACGCCTTCCGACTAACCAGCTTGGTGCCGTAGCTGTTTTATCCTTCCCTTaGCCTCAGGGTCATATTCTG +
Preference number: 5 (lower is better)
Translates to: FQGLSHKRLPTNQLGAVAVLSFP*PQGHIL
Trigger: CAGAATATGACCCTGAGGCAAAGGGAAGGATAAAAC...AGCTACGGCACCAAGCTGGTTAGTCGGAAGGCGTTTGTGGCTAAGGCCTTGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000636938.1
ENST00000638120.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CAA 90 bp AGCCACAAACGCCTTCCGACTAACCAGCTTGGTGCCGTAGCTCAGGCAGAAAATCTTTCCCACCAGTCCTaGTTCTTTCCGTTTCTTGAA +
Preference number: 5 (lower is better)
Translates to: SHKRLPTNQLGAVAQAENLSHQS*FFPFLE
Trigger: TTCAAGAAACGGAAAGAACAAGGACTGGTGGGAAAG...ATTTTCTGCCTGAGCTACGGCACCAAGCTGGTTAGTCGGAAGGCGTTTGTGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000636938.1
ENST00000638120.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CAA 90 bp TTTCAAGGCCTTAGCCACAAACGCCTTCCGACTAACCAGCTTGGTGCCGTAGCTCTTTCCCACCAGTCCTaGTTCTTTCCGTTTCTTGAA +
Preference number: 5 (lower is better)
Translates to: FQGLSHKRLPTNQLGAVALSHQS*FFPFLE
Trigger: TTCAAGAAACGGAAAGAACAAGGACTGGTGGGAAAG...AGCTACGGCACCAAGCTGGTTAGTCGGAAGGCGTTTGTGGCTAAGGCCTTGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636938.1
ENST00000638120.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CAA 90 bp GACTTACTTACACACCGTATTTCAGAACAGCTAAACAGGAACCAGGACGCAGTGGTAGTAGCCATAGTTTaGCCTGCTCCAGGTGGGCGA +
Preference number: 5 (lower is better)
Translates to: DLLTHRISEQLNRNQDAVVVAIV*PAPGGR
Trigger: TCGCCCACCTGGAGCAGGCAAAACTATGGCTACTAC...CACTGCGTCCTGGTTCCTGTTTAGCTGTTCTGAAATACGGTGTGTAAGTAAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CAA 90 bp TGCAACCCATGGTGGATCCAAAGGTACAGTATCAAAATCATGGAACTCTTGCCCGTAGTAGCCATAGTTTaGCCTGCTCCAGGTGGGCGA +
Preference number: 5 (lower is better)
Translates to: CNPWWIQRYSIKIMELLPVVAIV*PAPGGR
Trigger: TCGCCCACCTGGAGCAGGCAAAACTATGGCTACTAC...GGGCAAGAGTTCCATGATTTTGATACTGTACCTTTGGATCCACCATGGGTTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR CAA 90 bp AGGAACCAGGAGGATAAGAATATCCATAATTTCAGAGCTGCCCTGGCACAGTACTGCTTGTCGCTGTTTTaGTTCCGGAAGCTGCTGGGG +
Preference number: 5 (lower is better)
Translates to: RNQEDKNIHNFRAALAQYCLSLF*FRKLLG
Trigger: CCCCAGCAGCTTCCGGAACAAAAACAGCGACAAGCA...GTACTGTGCCAGGGCAGCTCTGAAATTATGGATATTCTTATCCTCCTGGTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR CAA 90 bp GACTTACTTACACACCGTATTTCAGAACAGCTAAACAGGAACCAGGACGCAGTGTGCTTGTCGCTGTTTTaGTTCCGGAAGCTGCTGGGG +
Preference number: 5 (lower is better)
Translates to: DLLTHRISEQLNRNQDAVCLSLF*FRKLLG
Trigger: CCCCAGCAGCTTCCGGAACAAAAACAGCGACAAGCA...CACTGCGTCCTGGTTCCTGTTTAGCTGTTCTGAAATACGGTGTGTAAGTAAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CAA 90 bp AACAAACTAGTGTATCTAAGTTTACCTGGTTGCGAGTGCATTATTATTCCAGTTGGGCCCACATCCCCGTaGGCTCGGGGACGCACGTTC +
Preference number: 5 (lower is better)
Translates to: NKLVYLSLPGCECIIIPVGPTSP*ARGRTF
Trigger: GAACGTGCGTCCCCGAGCCAACGGGGATGTGGGCCC...AACTGGAATAATAATGCACTCGCAACCAGGTAAACTTAGATACACTAGTTTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CAA 90 bp ATCATGGAACTCTTGCCCAAAGAAAAGACTGCAAATAGTCATCTGGTATATCTTCCGCCATGCCTTCAGTaGGGTGGGCCTGGTGCCCTG +
Preference number: 5 (lower is better)
Translates to: IMELLPKEKTANSHLVYLPPCLQ*GGPGAL
Trigger: CAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGG...AAGATATACCAGATGACTATTTGCAGTCTTTTCTTTGGGCAAGAGTTCCATGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR CAA 90 bp TACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCGTCATCTGGTATATCTaGTGGAAAGATGATAGGTTT +
Preference number: 5 (lower is better)
Translates to: YMGEADSTAVPIWTMGQGVIWYI*WKDDRF
Trigger: AAACCTATCATCTTTCCACAAGATATACCAGATGAC...GCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR CAA 90 bp TCATCACCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGGTCATCTGGTATATCTaGTGGAAAGATGATAGGTTT +
Preference number: 5 (lower is better)
Translates to: SSPLTFPCTPPPCLQLGGVIWYI*WKDDRF
Trigger: AAACCTATCATCTTTCCACAAGATATACCAGATGAC...CCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGGTGATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR CAA 90 bp GCTGTTTCAGTAGAAATAAGCCCACTTGAGACTTTTCCCTTTCAAGGCCTTAGCTTCCGGAGGAGTGCTTaGCTTGGAAGGGGTCTCCCT +
Preference number: 5 (lower is better)
Translates to: AVSVEISPLETFPFQGLSFRRSA*LGRGLP
Trigger: AGGGAGACCCCTTCCAAGCAAAGCACTCCTCCGGAA...GCTAAGGCCTTGAAAGGGAAAAGTCTCAAGTGGGCTTATTTCTACTGAAACAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CAA 90 bp TTTCAAGGCCTTAGCCACAAACGCCTTCCGACTAACCAGCTTGGTGCCGTAGCTTCTCTGAGTCTCTGCTaGGAAGGGAAAACTGTTAAG +
Preference number: 5 (lower is better)
Translates to: FQGLSHKRLPTNQLGAVASLSLC*EGKTVK
Trigger: CTTAACAGTTTTCCCTTCCAAGCAGAGACTCAGAGA...AGCTACGGCACCAAGCTGGTTAGTCGGAAGGCGTTTGTGGCTAAGGCCTTGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CAA 90 bp TCCTGTGGACACGTTAAGATGGAACCTGAGGTGTTGCCTGGATTGGTTTTGGCAATGGAACCTGAGGTGTaGCCTGGATTGGTTTTGGCA +
Preference number: 5 (lower is better)
Translates to: SCGHVKMEPEVLPGLVLAMEPEV*PGLVLA
Trigger: TGCCAAAACCAATCCAGGCAACACCTCAGGTTCCAT...TGCCAAAACCAATCCAGGCAACACCTCAGGTTCCATCTTAACGTGTCCACAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CAA 90 bp GTGTATCTGAGCTTCCTGGCCTGTCCACTTCTCACTGTATTCTGGACTGGGTCTGACTCCAACCACCACTaGGAATCAGCTGAGAATTCA +
Preference number: 5 (lower is better)
Translates to: VYLSFLACPLLTVFWTGSDSNHH*ESAENS
Trigger: TGAATTCTCAGCTGATTCCAAGTGGTGGTTGGAGTC...AGACCCAGTCCAGAATACAGTGAGAAGTGGACAGGCCAGGAAGCTCAGATACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636938.1
CDS-3UTR CAA 90 bp GTGTTTCCTGTGGACACGTTAAGATGGAACCTGAGGTGTTGCCTGGATTGGTTTGCCACTTTGGGTGTCTaGGGCTCAGCATCAGATGTA +
Preference number: 5 (lower is better)
Translates to: VFPVDTLRWNLRCCLDWFATLGV*GSASDV
Trigger: TACATCTGATGCTGAGCCCAAGACACCCAAAGTGGC...AAACCAATCCAGGCAACACCTCAGGTTCCATCTTAACGTGTCCACAGGAAACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636938.1
CDS GCA 90 bp TATTCGGCTGAGAAGTTGGTCCTTCACCAGAAAGAGGAAGTCTGGTaGCTCTTGCATAGTTTGCCTCTCCAAAAGCCAGAGAGAAGTACC +
Preference number: 5 (lower is better)
Translates to: YSAEKLVLHQKEEVW*LLHSLPLQKPERST
Trigger: GGTACTTCTCTCTGGCTTTTGGAGAGGCAAACTATGCAAGAGGCACCAGACTTCCTCTTTCTGGTGAAGGACCAACTTCTCAGCCGAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637424.1
CDS CCA 90 bp TTGCCAAGACAGGACAGTTTGCTTGGAGCTATTCGGCTGAGAAGTTaGTCCTTCACCAGAAAGAGGAAGTCTGGTGCCTCTTGCATAGTT +
Preference number: 5 (lower is better)
Translates to: LPRQDSLLGAIRLRS*SFTRKRKSGASCIV
Trigger: AACTATGCAAGAGGCACCAGACTTCCTCTTTCTGGTGAAGGACCAACTTCTCAGCCGAATAGCTCCAAGCAAACTGTCCTGTCTTGGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636480.1
ENST00000636570.1
ENST00000636938.1
ENST00000637424.1
ENST00000640483.1
CDS-3UTR CAA 90 bp AAACCGACCATCGGAGTGATATTCTCTTATGTAAACTGGCGTCACATCACAGAATGCCTCTTGCATAGTTaGCCTCGTTCGCGTGGTCCG +
Preference number: 5 (lower is better)
Translates to: KPTIGVIFSYVNWRHITECLLHS*PRSRGP
Trigger: CGGACCACGCGAACGAGGCAAACTATGCAAGAGGCA...TTCTGTGATGTGACGCCAGTTTACATAAGAGAATATCACTCCGATGGTCGGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CAA 90 bp GATGTGAAAATGCAACCTGCAGGGTTACCTCTGTTGACATCTTTGTGCATTGCCGAAGTCTGGTGCCTCTaGCATAGTTTGCCTCGTTCG +
Preference number: 5 (lower is better)
Translates to: DVKMQPAGLPLLTSLCIAEVWCL*HSLPRS
Trigger: CGAACGAGGCAAACTATGCAAGAGGCACCAGACTTC...GGCAATGCACAAAGATGTCAACAGAGGTAACCCTGCAGGTTGCATTTTCACATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636938.1
CDS-3UTR CAA 90 bp CAGGACTTTGGAATGGAGTCAGATACCCACCTTAGGCAGGTCTGCTTAATCTTTGAAGTCTGGTGCCTCTaGCATAGTTTGCCTCGTTCG +
Preference number: 5 (lower is better)
Translates to: QDFGMESDTHLRQVCLIFEVWCL*HSLPRS
Trigger: CGAACGAGGCAAACTATGCAAGAGGCACCAGACTTC...AAAGATTAAGCAGACCTGCCTAAGGTGGGTATCTGACTCCATTCCAAAGTCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR CAA 90 bp CAGGACTTTGGAATGGAGTCAGATACCCACCTTAGGCAGGTCTGCTTAATCTTTCCAAGACAGGACAGTTaGCTTGGAGCTATTCGGCTG +
Preference number: 5 (lower is better)
Translates to: QDFGMESDTHLRQVCLIFPRQDS*LGAIRL
Trigger: CAGCCGAATAGCTCCAAGCAAACTGTCCTGTCTTGG...AAAGATTAAGCAGACCTGCCTAAGGTGGGTATCTGACTCCATTCCAAAGTCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR CAA 90 bp TCCTGTGGACACGTTAAGATGGAACCTGAGGTGTTGCCTGGATTGGTTTTGGCATTGCTGACGTTTTCTTaGGGAGAGAGATCCTACAGG +
Preference number: 5 (lower is better)
Translates to: SCGHVKMEPEVLPGLVLALLTFS*GERSYR
Trigger: CCTGTAGGATCTCTCTCCCAAAGAAAACGTCAGCAA...TGCCAAAACCAATCCAGGCAACACCTCAGGTTCCATCTTAACGTGTCCACAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR CAA 90 bp ACTGGCGTCACATCACAGAAAACCTTATTTATGAGGTCCCATTGCCCTCGCAATAAGGCACGGAGGGCTTaGACATCAAAGCCTCCAGAT +
Preference number: 5 (lower is better)
Translates to: TGVTSQKTLFMRSHCPRNKARRA*TSKPPD
Trigger: ATCTGGAGGCTTTGATGTCAAAGCCCTCCGTGCCTT...ATTGCGAGGGCAATGGGACCTCATAAATAAGGTTTTCTGTGATGTGACGCCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CAA 90 bp TATTTCAGAACAGCTAAACAGGAACCAGGACGCAGTGTATTTGGGGGAAAGGGTCTACATCTTCTGCGATaGAATCGGTTCCAGCGACGC +
Preference number: 5 (lower is better)
Translates to: YFRTAKQEPGRSVFGGKGLHLLR*NRFQRR
Trigger: GCGTCGCTGGAACCGATTCAATCGCAGAAGATGTAG...ACCCTTTCCCCCAAATACACTGCGTCCTGGTTCCTGTTTAGCTGTTCTGAAATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CAA 90 bp CAGTCCCCAGAGGACAAGAGCAGCTATATCTCATCCACCTATGCATTTCTGCACAGAGACGAAATATGCTaGGAGGCCCAAGCTGTACAT +
Preference number: 5 (lower is better)
Translates to: QSPEDKSSYISSTYAFLHRDEIC*EAQAVH
Trigger: ATGTACAGCTTGGGCCTCCAAGCATATTTCGTCTCT...GTGCAGAAATGCATAGGTGGATGAGATATAGCTGCTCTTGTCCTCTGGGGACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR CAA 90 bp CAGACACTTAGGGTCCTGGTCTGGCAATTTTGGCCTGATGTGATGCCACAAGACTCAAAGGTGCTCCGCTaGGTTTGCGTTTCATCAAAA +
Preference number: 5 (lower is better)
Translates to: QTLRVLVWQFWPDVMPQDSKVLR*VCVSSK
Trigger: TTTTGATGAAACGCAAACCAAGCGGAGCACCTTTGA...GTCTTGTGGCATCACATCAGGCCAAAATTGCCAGACCAGGACCCTAAGTGTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR CAA 90 bp ATACCCAAGGGGCAGAGCAGCCAGCTGGACCTGCTCTGTAATTCACTTACTTACCACTGTGAGAAGTGCTaGAGGGAAATTGTCAAAGGT +
Preference number: 5 (lower is better)
Translates to: IPKGQSSQLDLLCNSLTYHCEKC*REIVKG
Trigger: ACCTTTGACAATTTCCCTCAAGCACTTCTCACAGTG...GTAAGTAAGTGAATTACAGAGCAGGTCCAGCTGGCTGCTCTGCCCCTTGGGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR CAA 90 bp AACCGTAACTATGGATACCCAAGGGGCAGAGCAGCCAGCTGGACCTGCTCTGTATCATCAATTGTAACCTaGTTGTCACTGTTGGCTATC +
Preference number: 5 (lower is better)
Translates to: NRNYGYPRGRAASWTCSVSSIVT*LSLLAI
Trigger: GATAGCCAACAGTGACAACAAGGTTACAATTGATGA...TACAGAGCAGGTCCAGCTGGCTGCTCTGCCCCTTGGGTATCCATAGTTACGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR CAA 90 bp GATGTGAAAATGCAACCTGCAGGGTTACCTCTGTTGACATCTTTGTGCATTGCCCCTACGCGGATCGGGTaGGTCTTGCTAAGAATGAAG +
Preference number: 5 (lower is better)
Translates to: DVKMQPAGLPLLTSLCIAPTRIG*VLLRMK
Trigger: CTTCATTCTTAGCAAGACCAACCCGATCCGCGTAGG...GGCAATGCACAAAGATGTCAACAGAGGTAACCCTGCAGGTTGCATTTTCACATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636938.1
CDS-3UTR CAA 90 bp AAGGGAAAACTGTTAAGCTTTGTACGTTCCCTTTCACGAAAAAGAACCACCGTGTGGTGGTTGATGAGCTaGTGGCAGCCTACGCGGATC +
Preference number: 5 (lower is better)
Translates to: KGKLLSFVRSLSRKRTTVWWLMS*WQPTRI
Trigger: GATCCGCGTAGGCTGCCACAAGCTCATCAACCACCA...CACGGTGGTTCTTTTTCGTGAAAGGGAACGTACAAAGCTTAACAGTTTTCCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR CAA 90 bp TATTTCAGAACAGCTAAACAGGAACCAGGACGCAGTGTATTTGGGGGAAAGGGTGTGAAGATGTGGTGGTaGATGAGCTTGTGGCAGCCT +
Preference number: 5 (lower is better)
Translates to: YFRTAKQEPGRSVFGGKGVKMWW*MSLWQP
Trigger: AGGCTGCCACAAGCTCATCAACCACCACATCTTCAC...ACCCTTTCCCCCAAATACACTGCGTCCTGGTTCCTGTTTAGCTGTTCTGAAATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CAA 90 bp TCCTGTGGACACGTTAAGATGGAACCTGAGGTGTTGCCTGGATTGGTTTTGGCAAAGACAAGGATGAGGTaGGTGAAGATGTGGTGGTTG +
Preference number: 5 (lower is better)
Translates to: SCGHVKMEPEVLPGLVLAKTRMR*VKMWWL
Trigger: CAACCACCACATCTTCACCAACCTCATCCTTGTCTT...TGCCAAAACCAATCCAGGCAACACCTCAGGTTCCATCTTAACGTGTCCACAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR CAA 90 bp AAGGGAAAACTGTTAAGCTTTGTACGTTCCCTTTCACGAAAAAGAACCACCGTGAGTCCTTTTGCTCTGTaGATGGCCCTGAGGGGACGC +
Preference number: 5 (lower is better)
Translates to: KGKLLSFVRSLSRKRTTVSPFAL*MALRGR
Trigger: GCGTCCCCTCAGGGCCATCAACAGAGCAAAAGGACT...CACGGTGGTTCTTTTTCGTGAAAGGGAACGTACAAAGCTTAACAGTTTTCCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CAA 90 bp AGCCACAAACGCCTTCCGACTAACCAGCTTGGTGCCGTAGCTCAGGCAGAAAATACAGCCACAAACAGATaGATGATCAGAAATGCACAG +
Preference number: 5 (lower is better)
Translates to: SHKRLPTNQLGAVAQAENTATNR*MIRNAQ
Trigger: CTGTGCATTTCTGATCATCAATCTGTTTGTGGCTGT...ATTTTCTGCCTGAGCTACGGCACCAAGCTGGTTAGTCGGAAGGCGTTTGTGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000636938.1
ENST00000638120.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CAA 90 bp TTTCCTGTGGACACGTTAAGATGGAACCTGAGGTGTTGCCTGGATTGGTTTTGGATGGCAACTAATCTCTaGCACGCTACCCTGTGTGGA +
Preference number: 5 (lower is better)
Translates to: FPVDTLRWNLRCCLDWFWMATNL*HATLCG
Trigger: TCCACACAGGGTAGCGTGCAAGAGATTAGTTGCCAT...CCAAAACCAATCCAGGCAACACCTCAGGTTCCATCTTAACGTGTCCACAGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CAA 90 bp CACTCTCTGGACTTTCTGGAGACACTAGCATTAAAACCAAAGCACTGGCCAAGGAGGTTCCCTTCGGTCTaGATCTTAAGAGCCGTTCGA +
Preference number: 5 (lower is better)
Translates to: HSLDFLETLALKPKHWPRRFPSV*ILRAVR
Trigger: TCGAACGGCTCTTAAGATCAAGACCGAAGGGAACCT...CCTTGGCCAGTGCTTTGGTTTTAATGCTAGTGTCTCCAGAAAGTCCAGAGAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636627.1
CDS-3UTR CAA 90 bp GTGTTTCCTGTGGACACGTTAAGATGGAACCTGAGGTGTTGCCTGGATTGGTTTAGGTTCCCTTCGGTCTaGATCTTAAGAGCCGTTCGA +
Preference number: 5 (lower is better)
Translates to: VFPVDTLRWNLRCCLDWFRFPSV*ILRAVR
Trigger: TCGAACGGCTCTTAAGATCAAGACCGAAGGGAACCT...AAACCAATCCAGGCAACACCTCAGGTTCCATCTTAACGTGTCCACAGGAAACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CAA 90 bp CAGTCCCCAGAGGACAAGAGCAGCTATATCTCATCCACCTATGCATTTCTGCACCTCAGGCTCGTCATCTaGCAAATCACACGATATAGC +
Preference number: 5 (lower is better)
Translates to: QSPEDKSSYISSTYAFLHLRLVI*QITRYS
Trigger: GCTATATCGTGTGATTTGCAAGATGACGAGCCTGAG...GTGCAGAAATGCATAGGTGGATGAGATATAGCTGCTCTTGTCCTCTGGGGACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR CAA 90 bp CCAAGGGGCAGAGCAGCCAGCTGGACCTGCTCTGTAATTCACTTACTTACTTACCTTCTTCTTCTCGTTTaGTTTCCTCAGGCTCGTCAT +
Preference number: 5 (lower is better)
Translates to: PRGRAASWTCSVIHLLTYLLLLV*FPQARH
Trigger: ATGACGAGCCTGAGGAAACAAAACGAGAAGAAGAAG...GTAAGTAAGTAAGTGAATTACAGAGCAGGTCCAGCTGGCTGCTCTGCCCCTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR CAA 90 bp CGTATTTCAGAACAGCTAAACAGGAACCAGGACGCAGTGTATTTGGGGGAAAGGACTTCTGGGCTTTACTaGAATCTAGGCCGGCAACTG +
Preference number: 5 (lower is better)
Translates to: RISEQLNRNQDAVYLGERTSGLY*NLGRQL
Trigger: CAGTTGCCGGCCTAGATTCAAGTAAAGCCCAGAAGT...CCTTTCCCCCAAATACACTGCGTCCTGGTTCCTGTTTAGCTGTTCTGAAATACG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CAA 90 bp ACTGACTTTGGAAAAGATCATCGCCTCTATCAGACACTTAGGGTCCTGGTCTGGACTTCTGGGCTTTACTaGAATCTAGGCCGGCAACTG +
Preference number: 5 (lower is better)
Translates to: TDFGKDHRLYQTLRVLVWTSGLY*NLGRQL
Trigger: CAGTTGCCGGCCTAGATTCAAGTAAAGCCCAGAAGT...CCAGACCAGGACCCTAAGTGTCTGATAGAGGCGATGATCTTTTCCAAAGTCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR CAA 90 bp GTTTCAGTAGAAATAAGCCCACTTGAGACTTTTCCCTTTCAAGGCCTTAGCCACTTGCTCTCTTCAGAGTaGTCTGCTTCGCTGAGGGCC +
Preference number: 5 (lower is better)
Translates to: VSVEISPLETFPFQGLSHLLSSE*SASLRA
Trigger: GGCCCTCAGCGAAGCAGACAACTCTGAAGAGAGCAA...GTGGCTAAGGCCTTGAAAGGGAAAAGTCTCAAGTGGGCTTATTTCTACTGAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638120.1
CDS-3UTR CAA 90 bp CAGGACTTTGGAATGGAGTCAGATACCCACCTTAGGCAGGTCTGCTTAATCTTTGCATCTGTAGGGCAATaGTGGTGTTCTTCGCAGGGT +
Preference number: 5 (lower is better)
Translates to: QDFGMESDTHLRQVCLIFASVGQ*WCSSQG
Trigger: ACCCTGCGAAGAACACCACAATTGCCCTACAGATGC...AAAGATTAAGCAGACCTGCCTAAGGTGGGTATCTGACTCCATTCCAAAGTCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CAA 90 bp GTGTTTCCTGTGGACACGTTAAGATGGAACCTGAGGTGTTGCCTGGATTGGTTTATGGAACCTGAGGTGTaGCCTGGATTGGTTTTGGCA +
Preference number: 5 (lower is better)
Translates to: VFPVDTLRWNLRCCLDWFMEPEV*PGLVLA
Trigger: TGCCAAAACCAATCCAGGCAACACCTCAGGTTCCAT...AAACCAATCCAGGCAACACCTCAGGTTCCATCTTAACGTGTCCACAGGAAACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CAA 90 bp CGTATTTCAGAACAGCTAAACAGGAACCAGGACGCAGTGTATTTGGGGGAAAGGTTGCTGACGTTTTCTTaGGGAGAGAGATCCTACAGG +
Preference number: 5 (lower is better)
Translates to: RISEQLNRNQDAVYLGERLLTFS*GERSYR
Trigger: CCTGTAGGATCTCTCTCCCAAAGAAAACGTCAGCAA...CCTTTCCCCCAAATACACTGCGTCCTGGTTCCTGTTTAGCTGTTCTGAAATACG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CAA 90 bp AAACCGACCATCGGAGTGATATTCTCTTATGTAAACTGGCGTCACATCACAGAATCAAAGCCTCCAGATTaGCCGCTTGAGTGGTTCCCG +
Preference number: 5 (lower is better)
Translates to: KPTIGVIFSYVNWRHITESKPPD*PLEWFP
Trigger: CGGGAACCACTCAAGCGGCAAATCTGGAGGCTTTGA...TTCTGTGATGTGACGCCAGTTTACATAAGAGAATATCACTCCGATGGTCGGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CAA 90 bp TACGTTCAAAGTGCTTTACAATCACTTAGCTATTCCTCACAACAGCCCTGTGAGTCAAAGCCTCCAGATTaGCCGCTTGAGTGGTTCCCG +
Preference number: 5 (lower is better)
Translates to: YVQSALQSLSYSSQQPCESKPPD*PLEWFP
Trigger: CGGGAACCACTCAAGCGGCAAATCTGGAGGCTTTGA...CTCACAGGGCTGTTGTGAGGAATAGCTAAGTGATTGTAAAGCACTTTGAACGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636938.1
CDS-3UTR CAA 90 bp TTCTTAAGCAGCACCACCAGTCCCCAGAGGACAAGAGCAGCTATATCTCATCCAATGCTAGTATTTCGTTaGCCTTCCTCTCCTCCTTCT +
Preference number: 5 (lower is better)
Translates to: FLSSTTSPQRTRAAISHPMLVFR*PSSPPS
Trigger: AGAAGGAGGAGAGGAAGGCAAACGAAATACTAGCAT...TGGATGAGATATAGCTGCTCTTGTCCTCTGGGGACTGGTGGTGCTGCTTAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR CAA 90 bp CGACACTCCAATCCTATAGATCACCACGTTGCTCCTCTGTCCCCAGCACCCCTTAAGCAATCAAACCGGTaGAAAAGAGAGACGAAATAT +
Preference number: 5 (lower is better)
Translates to: RHSNPIDHHVAPLSPAPLKQSNR*KRETKY
Trigger: ATATTTCGTCTCTCTTTTCAACCGGTTTGATTGCTT...AAGGGGTGCTGGGGACAGAGGAGCAACGTGGTGATCTATAGGATTGGAGTGTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR CAA 90 bp CACCAGTCCCCAGAGGACAAGAGCAGCTATATCTCATCCACCTATGCATTTCTGACCTTGTTGTCACTGTaGGCTATCTGGTTGACTTCT +
Preference number: 5 (lower is better)
Translates to: HQSPEDKSSYISSTYAFLTLLSL*AIWLTS
Trigger: AGAAGTCAACCAGATAGCCAACAGTGACAACAAGGT...CAGAAATGCATAGGTGGATGAGATATAGCTGCTCTTGTCCTCTGGGGACTGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR CAA 90 bp TGTACAGACTCCAACCACCACTTGGAATCAGCTGAGAATTCAAGATCAGACACCCGGATCGGGTTGGTCTaGCTAAGAATGAAGAAAGCG +
Preference number: 5 (lower is better)
Translates to: CTDSNHHLESAENSRSDTRIGLV*LRMKKA
Trigger: CGCTTTCTTCATTCTTAGCAAGACCAACCCGATCCG...GGTGTCTGATCTTGAATTCTCAGCTGATTCCAAGTGGTGGTTGGAGTCTGTACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636938.1
CDS-3UTR CAA 90 bp TGCAAACACTCTCTGGACTTTCTGGAGACACTAGCATTAAAACCAAAGCACTGGCTGCAGAAGGCCCCTTaGTGGAGGAAAGCTCCAAAA +
Preference number: 5 (lower is better)
Translates to: CKHSLDFLETLALKPKHWLQKAP*WRKAPK
Trigger: TTTTGGAGCTTTCCTCCACAAAGGGGCCTTCTGCAG...CCAGTGCTTTGGTTTTAATGCTAGTGTCTCCAGAAAGTCCAGAGAGTGTTTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636627.1
CDS-3UTR CAA 90 bp GCTGTTTCAGTAGAAATAAGCCCACTTGAGACTTTTCCCTTTCAAGGCCTTAGCCTGCAGAAGGCCCCTTaGTGGAGGAAAGCTCCAAAA +
Preference number: 5 (lower is better)
Translates to: AVSVEISPLETFPFQGLSLQKAP*WRKAPK
Trigger: TTTTGGAGCTTTCCTCCACAAAGGGGCCTTCTGCAG...GCTAAGGCCTTGAAAGGGAAAAGTCTCAAGTGGGCTTATTTCTACTGAAACAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CAA 90 bp ACTGACTTTGGAAAAGATCATCGCCTCTATCAGACACTTAGGGTCCTGGTCTGGATGTCCATGGCATCATaGAACATCTTGGACTGCTCG +
Preference number: 5 (lower is better)
Translates to: TDFGKDHRLYQTLRVLVWMSMAS*NILDCS
Trigger: CGAGCAGTCCAAGATGTTCAATGATGCCATGGACAT...CCAGACCAGGACCCTAAGTGTCTGATAGAGGCGATGATCTTTTCCAAAGTCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR CAA 90 bp AGCCACAAACGCCTTCCGACTAACCAGCTTGGTGCCGTAGCTCAGGCAGAAAATTTCCTATTGATCTGGTaGTTATCTCTCATGGCAACT +
Preference number: 5 (lower is better)
Translates to: SHKRLPTNQLGAVAQAENFLLIW*LSLMAT
Trigger: AGTTGCCATGAGAGATAACAACCAGATCAATAGGAA...ATTTTCTGCCTGAGCTACGGCACCAAGCTGGTTAGTCGGAAGGCGTTTGTGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000636938.1
ENST00000638120.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CAA 90 bp TTTCAAGGCCTTAGCCACAAACGCCTTCCGACTAACCAGCTTGGTGCCGTAGCTTTCCTATTGATCTGGTaGTTATCTCTCATGGCAACT +
Preference number: 5 (lower is better)
Translates to: FQGLSHKRLPTNQLGAVAFLLIW*LSLMAT
Trigger: AGTTGCCATGAGAGATAACAACCAGATCAATAGGAA...AGCTACGGCACCAAGCTGGTTAGTCGGAAGGCGTTTGTGGCTAAGGCCTTGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636938.1
ENST00000638120.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CAA 90 bp TTTCAAGGCCTTAGCCACAAACGCCTTCCGACTAACCAGCTTGGTGCCGTAGCTAACGTCTGGAAGTTATaGTTCCTATTGATCTGGTTG +
Preference number: 5 (lower is better)
Translates to: FQGLSHKRLPTNQLGAVANVWKL*FLLIWL
Trigger: CAACCAGATCAATAGGAACAATAACTTCCAGACGTT...AGCTACGGCACCAAGCTGGTTAGTCGGAAGGCGTTTGTGGCTAAGGCCTTGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636938.1
ENST00000638120.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CAA 90 bp GTGTCTTGGGCTCAGCATCAGATGTACAGACTCCAACCACCACTTGGAATCAGCACAGCCACAAACAGATaGATGATCAGAAATGCACAG +
Preference number: 5 (lower is better)
Translates to: VSWAQHQMYRLQPPLGISTATNR*MIRNAQ
Trigger: CTGTGCATTTCTGATCATCAATCTGTTTGTGGCTGT...GCTGATTCCAAGTGGTGGTTGGAGTCTGTACATCTGATGCTGAGCCCAAGACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636938.1
CDS-3UTR CAA 90 bp TTCTTAAGCAGCACCACCAGTCCCCAGAGGACAAGAGCAGCTATATCTCATCCAGTTTTATCCTTCCCTTaGCCTCAGGGTCATATTCTG +
Preference number: 5 (lower is better)
Translates to: FLSSTTSPQRTRAAISHPVLSFP*PQGHIL
Trigger: CAGAATATGACCCTGAGGCAAAGGGAAGGATAAAAC...TGGATGAGATATAGCTGCTCTTGTCCTCTGGGGACTGGTGGTGCTGCTTAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR CAA 90 bp ACTGGCGTCACATCACAGAAAACCTTATTTATGAGGTCCCATTGCCCTCGCAATATGGCAACTAATCTCTaGCACGCTACCCTGTGTGGA +
Preference number: 5 (lower is better)
Translates to: TGVTSQKTLFMRSHCPRNMATNL*HATLCG
Trigger: TCCACACAGGGTAGCGTGCAAGAGATTAGTTGCCAT...ATTGCGAGGGCAATGGGACCTCATAAATAAGGTTTTCTGTGATGTGACGCCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CAA 90 bp GATGTGAAAATGCAACCTGCAGGGTTACCTCTGTTGACATCTTTGTGCATTGCCATGGCAACTAATCTCTaGCACGCTACCCTGTGTGGA +
Preference number: 5 (lower is better)
Translates to: DVKMQPAGLPLLTSLCIAMATNL*HATLCG
Trigger: TCCACACAGGGTAGCGTGCAAGAGATTAGTTGCCAT...GGCAATGCACAAAGATGTCAACAGAGGTAACCCTGCAGGTTGCATTTTCACATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636938.1
CDS-3UTR CAA 90 bp CAGACACTTAGGGTCCTGGTCTGGCAATTTTGGCCTGATGTGATGCCACAAGACGCAGCTTTGGACATATaGGCATTATTGAGATTGGCA +
Preference number: 5 (lower is better)
Translates to: QTLRVLVWQFWPDVMPQDAALDI*ALLRLA
Trigger: TGCCAATCTCAATAATGCCAATATGTCCAAAGCTGC...GTCTTGTGGCATCACATCAGGCCAAAATTGCCAGACCAGGACCCTAAGTGTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR CAA 90 bp TCTAATTATCCAAAAGTGGGTTTTCATCAGGACGTACAGTCAGAGTGTGAGTGCGTCCTCCAAGAATCCTaGGGGATGATGGTAGCCTCG +
Preference number: 5 (lower is better)
Translates to: SNYPKVGFHQDVQSECECVLQES*GMMVAS
Trigger: CGAGGCTACCATCATCCCCAAGGATTCTTGGAGGAC...GCACTCACACTCTGACTGTACGTCCTGATGAAAACCCACTTTTGGATAATTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR CAA 90 bp ACTGGCGTCACATCACAGAAAACCTTATTTATGAGGTCCCATTGCCCTCGCAATCAAATTTTGGGTCCCTaGCATAGCGTCCCAAGCCTT +
Preference number: 5 (lower is better)
Translates to: TGVTSQKTLFMRSHCPRNQILGP*HSVPSL
Trigger: AAGGCTTGGGACGCTATGCAAGGGACCCAAAATTTG...ATTGCGAGGGCAATGGGACCTCATAAATAAGGTTTTCTGTGATGTGACGCCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CAA 90 bp TGCAACCCATGGTGGATCCAAAGGTACAGTATCAAAATCATGGAACTCTTGCCCCAAATTTTGGGTCCCTaGCATAGCGTCCCAAGCCTT +
Preference number: 5 (lower is better)
Translates to: CNPWWIQRYSIKIMELLPQILGP*HSVPSL
Trigger: AAGGCTTGGGACGCTATGCAAGGGACCCAAAATTTG...GGGCAAGAGTTCCATGATTTTGATACTGTACCTTTGGATCCACCATGGGTTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS TCA 90 bp ATGCTTGGAGGCCCAAGCTGTACATTTTTACCAGCATCTCGCAGGTaGACAGAGCCAAGAGGACTTTGTTGGCAATATCTTGAATCTGTG +
Preference number: 5 (lower is better)
Translates to: MLGGPSCTFLPASRR*TEPRGLCWQYLESV
Trigger: CACAGATTCAAGATATTGCCAACAAAGTCCTCTTGGCTCTGTTCACCTGCGAGATGCTGGTAAAAATGTACAGCTTGGGCCTCCAAGCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000481478.1
ENST00000636570.1
ENST00000636627.1
ENST00000636938.1
ENST00000637424.1
ENST00000640483.1
CDS TCA 90 bp AAAACCAAAGCACTGGCCAAGGACTACTTAGGAAATAGACTGCACTaGCCACCAGCTGGAGGGACAACTTGGTCAAGTAATTTCATGCTG +
Preference number: 5 (lower is better)
Translates to: KTKALAKDYLGNRLH*PPAGGTTWSSNFML
Trigger: CAGCATGAAATTACTTGACCAAGTTGTCCCTCCAGCTGGTGGTCAGTGCAGTCTATTTCCTAAGTAGTCCTTGGCCAGTGCTTTGGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636627.1
CDS TCA 90 bp ATGTTGATCATGAGCCCTCAGAGTCACCCTTATTTTAAAATGTGCTaGCGGTGGCATCCATTGACATGGATCCTGAAGCTTGATGGGCTG +
Preference number: 5 (lower is better)
Translates to: MLIMSPQSHPYFKMC*RWHPLTWILKLDGL
Trigger: CAGCCCATCAAGCTTCAGGATCCATGTCAATGGATGCCACCGTCAGCACATTTTAAAATAAGGGTGACTCTGAGGGCTCATGATCAACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637589.2
CDS GCA 90 bp AGGCTGGAGATGACAATCTATGGGATGGGGAACAATTTAGATGATTaGAACCAATCCTTAGCACGTCCTGTGGAGCGCAGTGAAAACCAA +
Preference number: 5 (lower is better)
Translates to: RLEMTIYGMGNNLDD*NQSLARPVERSENQ
Trigger: TTGGTTTTCACTGCGCTCCACAGGACGTGCTAAGGATTGGTTGCAATCATCTAAATTGTTCCCCATCCCATAGATTGTCATCTCCAGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637081.1
CDS GCA 90 bp TGCGTGCGCAGGCAGGACCATGCAAAGGACTACCCAAAACGTTTTTaGAAAGAATACAAACGCAGGCTGAATTCAATCATTTCTCAGCCA +
Preference number: 5 (lower is better)
Translates to: CVRRQDHAKDYPKRF*KEYKRRLNSIISQP
Trigger: TGGCTGAGAAATGATTGAATTCAGCCTGCGTTTGTATTCTTTGCAAAAACGTTTTGGGTAGTCCTTTGCATGGTCCTGCCTGCGCACGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637081.1
CDS-3UTR CAA 90 bp AAACCGACCATCGGAGTGATATTCTCTTATGTAAACTGGCGTCACATCACAGAACCAAGACAGGACAGTTaGCTTGGAGCTATTCGGCTG +
Preference number: 5 (lower is better)
Translates to: KPTIGVIFSYVNWRHITEPRQDS*LGAIRL
Trigger: CAGCCGAATAGCTCCAAGCAAACTGTCCTGTCTTGG...TTCTGTGATGTGACGCCAGTTTACATAAGAGAATATCACTCCGATGGTCGGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CAA 90 bp TTGGACCAAAATTGCTACCTATCATCTATCTTTTTGATTGCAGGGAATCCCTGCCTACATTCCGTGCCATaGGCAGTACACTGGCGTCCA +
Preference number: 5 (lower is better)
Translates to: LDQNCYLSSIFLIAGNPCLHSVP*AVHWRP
Trigger: TGGACGCCAGTGTACTGCCAATGGCACGGAATGTAG...GCAGGGATTCCCTGCAATCAAAAAGATAGATGATAGGTAGCAATTTTGGTCCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR CAA 90 bp GTGTTTCCTGTGGACACGTTAAGATGGAACCTGAGGTGTTGCCTGGATTGGTTTATGCTAGTATTTCGTTaGCCTTCCTCTCCTCCTTCT +
Preference number: 5 (lower is better)
Translates to: VFPVDTLRWNLRCCLDWFMLVFR*PSSPPS
Trigger: AGAAGGAGGAGAGGAAGGCAAACGAAATACTAGCAT...AAACCAATCCAGGCAACACCTCAGGTTCCATCTTAACGTGTCCACAGGAAACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR CAA 90 bp GTTAAGCTTTGTACGTTCCCTTTCACGAAAAAGAACCACCGTGAGCAACGTCCGTCAAAGGTGCTCCGCTaGGTTTGCGTTTCATCAAAA +
Preference number: 5 (lower is better)
Translates to: VKLCTFPFTKKNHREQRPSKVLR*VCVSSK
Trigger: TTTTGATGAAACGCAAACCAAGCGGAGCACCTTTGA...CGGACGTTGCTCACGGTGGTTCTTTTTCGTGAAAGGGAACGTACAAAGCTTAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR CAA 90 bp TGCAAACACTCTCTGGACTTTCTGGAGACACTAGCATTAAAACCAAAGCACTGGCGGATCGGGTTGGTCTaGCTAAGAATGAAGAAAGCG +
Preference number: 5 (lower is better)
Translates to: CKHSLDFLETLALKPKHWRIGLV*LRMKKA
Trigger: CGCTTTCTTCATTCTTAGCAAGACCAACCCGATCCG...CCAGTGCTTTGGTTTTAATGCTAGTGTCTCCAGAAAGTCCAGAGAGTGTTTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636627.1
CDS-3UTR CAA 90 bp TCTAATTATCCAAAAGTGGGTTTTCATCAGGACGTACAGTCAGAGTGTGAGTGCCCTACGCGGATCGGGTaGGTCTTGCTAAGAATGAAG +
Preference number: 5 (lower is better)
Translates to: SNYPKVGFHQDVQSECECPTRIG*VLLRMK
Trigger: CTTCATTCTTAGCAAGACCAACCCGATCCGCGTAGG...GCACTCACACTCTGACTGTACGTCCTGATGAAAACCCACTTTTGGATAATTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR CAA 90 bp TTGCAAACACTCTCTGGACTTTCTGGAGACACTAGCATTAAAACCAAAGCACTGGTGAAGATGTGGTGGTaGATGAGCTTGTGGCAGCCT +
Preference number: 5 (lower is better)
Translates to: LQTLSGLSGDTSIKTKALVKMWW*MSLWQP
Trigger: AGGCTGCCACAAGCTCATCAACCACCACATCTTCAC...CAGTGCTTTGGTTTTAATGCTAGTGTCTCCAGAAAGTCCAGAGAGTGTTTGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636627.1
CDS-3UTR CAA 90 bp CCTCTCCTTTGTCTGGAATGTTCTTCATATCACCCCCAAAATAATCACACCAAACGCGGTGGTTGTAGATaGGGCCGATGTTCTCTCCAT +
Preference number: 5 (lower is better)
Translates to: PLLCLECSSYHPQNNHTKRGGCR*GRCSLH
Trigger: ATGGAGAGAACATCGGCCCAATCTACAACCACCGCG...TTTGGTGTGATTATTTTGGGGGTGATATGAAGAACATTCCAGACAAAGGAGAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636627.1
CDS-3UTR CAA 90 bp CACCAGTCCCCAGAGGACAAGAGCAGCTATATCTCATCCACCTATGCATTTCTGACAGCCACAAACAGATaGATGATCAGAAATGCACAG +
Preference number: 5 (lower is better)
Translates to: HQSPEDKSSYISSTYAFLTATNR*MIRNAQ
Trigger: CTGTGCATTTCTGATCATCAATCTGTTTGTGGCTGT...CAGAAATGCATAGGTGGATGAGATATAGCTGCTCTTGTCCTCTGGGGACTGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR CAA 90 bp TTCTTAAGCAGCACCACCAGTCCCCAGAGGACAAGAGCAGCTATATCTCATCCAACAGCCACAAACAGATaGATGATCAGAAATGCACAG +
Preference number: 5 (lower is better)
Translates to: FLSSTTSPQRTRAAISHPTATNR*MIRNAQ
Trigger: CTGTGCATTTCTGATCATCAATCTGTTTGTGGCTGT...TGGATGAGATATAGCTGCTCTTGTCCTCTGGGGACTGGTGGTGCTGCTTAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR CAA 90 bp GTTAAGCTTTGTACGTTCCCTTTCACGAAAAAGAACCACCGTGAGCAACGTCCGGTTTTATCCTTCCCTTaGCCTCAGGGTCATATTCTG +
Preference number: 5 (lower is better)
Translates to: VKLCTFPFTKKNHREQRPVLSFP*PQGHIL
Trigger: CAGAATATGACCCTGAGGCAAAGGGAAGGATAAAAC...CGGACGTTGCTCACGGTGGTTCTTTTTCGTGAAAGGGAACGTACAAAGCTTAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CAA 90 bp GTTTCAGTAGAAATAAGCCCACTTGAGACTTTTCCCTTTCAAGGCCTTAGCCACATGGCAACTAATCTCTaGCACGCTACCCTGTGTGGA +
Preference number: 5 (lower is better)
Translates to: VSVEISPLETFPFQGLSHMATNL*HATLCG
Trigger: TCCACACAGGGTAGCGTGCAAGAGATTAGTTGCCAT...GTGGCTAAGGCCTTGAAAGGGAAAAGTCTCAAGTGGGCTTATTTCTACTGAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000636938.1
ENST00000638120.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CAA 90 bp TTCCCAATGCTGGGCCGCTTTCCATGGGCAGCTTTGGACATATTGGCATTATTGGCAGCTTTGGACATATaGGCATTATTGAGATTGGCA +
Preference number: 5 (lower is better)
Translates to: FPMLGRFPWAALDILALLAALDI*ALLRLA
Trigger: TGCCAATCTCAATAATGCCAATATGTCCAAAGCTGC...CAATAATGCCAATATGTCCAAAGCTGCCCATGGAAAGCGGCCCAGCATTGGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636448.1
CDS-3UTR CAA 90 bp AGTGGGGAACTACAATTATTAGGACCCATGGATATTGCTGCAGTTCAAATACAACGCAGGCACTCAAAGTaGAAGGAGGATCTCCGGTGG +
Preference number: 5 (lower is better)
Translates to: SGELQLLGPMDIAAVQIQRRHSK*KEDLRW
Trigger: CCACCGGAGATCCTCCTTCAACTTTGAGTGCCTGCG...TTGTATTTGAACTGCAGCAATATCCATGGGTCCTAATAATTGTAGTTCCCCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR CAA 90 bp CAGACACTTAGGGTCCTGGTCTGGCAATTTTGGCCTGATGTGATGCCACAAGACAGGTTTATGGCTTTCTaGAGGCATGACATCTCTTAT +
Preference number: 5 (lower is better)
Translates to: QTLRVLVWQFWPDVMPQDRFMAF*RHDISY
Trigger: ATAAGAGATGTCATGCCTCAAGAAAGCCATAAACCT...GTCTTGTGGCATCACATCAGGCCAAAATTGCCAGACCAGGACCCTAAGTGTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR CAA 90 bp AACAAACTAGTGTATCTAAGTTTACCTGGTTGCGAGTGCATTATTATTCCAGTTGCCAGGCTCAACCGCTaGGGACCTGTTCCTACCAGG +
Preference number: 5 (lower is better)
Translates to: NKLVYLSLPGCECIIIPVARLNR*GPVPTR
Trigger: CCTGGTAGGAACAGGTCCCAAGCGGTTGAGCCTGGC...AACTGGAATAATAATGCACTCGCAACCAGGTAAACTTAGATACACTAGTTTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CAA 90 bp CAGACACTTAGGGTCCTGGTCTGGCAATTTTGGCCTGATGTGATGCCACAAGACTCTAAGTTTACCTGGTaGCGAGTGCATTATTATTCC +
Preference number: 5 (lower is better)
Translates to: QTLRVLVWQFWPDVMPQDSKFTW*RVHYYS
Trigger: GGAATAATAATGCACTCGCAACCAGGTAAACTTAGA...GTCTTGTGGCATCACATCAGGCCAAAATTGCCAGACCAGGACCCTAAGTGTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR CAA 90 bp TATTTCAGAACAGCTAAACAGGAACCAGGACGCAGTGTATTTGGGGGAAAGGGTCAAAACCAAAGACAGTaGCAACCCATGGTGGATCCA +
Preference number: 5 (lower is better)
Translates to: YFRTAKQEPGRSVFGGKGQNQRQ*QPMVDP
Trigger: TGGATCCACCATGGGTTGCAACTGTCTTTGGTTTTG...ACCCTTTCCCCCAAATACACTGCGTCCTGGTTCCTGTTTAGCTGTTCTGAAATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR CAA 90 bp AAGGGAAAACTGTTAAGCTTTGTACGTTCCCTTTCACGAAAAAGAACCACCGTGGCATCTGTAGGGCAATaGTGGTGTTCTTCGCAGGGT +
Preference number: 5 (lower is better)
Translates to: KGKLLSFVRSLSRKRTTVASVGQ*WCSSQG
Trigger: ACCCTGCGAAGAACACCACAATTGCCCTACAGATGC...CACGGTGGTTCTTTTTCGTGAAAGGGAACGTACAAAGCTTAACAGTTTTCCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CAA 90 bp TTTCCTGTGGACACGTTAAGATGGAACCTGAGGTGTTGCCTGGATTGGTTTTGGTCTCTGAGTCTCTGCTaGGAAGGGAAAACTGTTAAG +
Preference number: 5 (lower is better)
Translates to: FPVDTLRWNLRCCLDWFWSLSLC*EGKTVK
Trigger: CTTAACAGTTTTCCCTTCCAAGCAGAGACTCAGAGA...CCAAAACCAATCCAGGCAACACCTCAGGTTCCATCTTAACGTGTCCACAGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CAA 90 bp TACGTTCAAAGTGCTTTACAATCACTTAGCTATTCCTCACAACAGCCCTGTGAGAGCATCGATTGCAGCTaGCCAAGACAGGACAGTTTG +
Preference number: 5 (lower is better)
Translates to: YVQSALQSLSYSSQQPCESIDCS*PRQDSL
Trigger: CAAACTGTCCTGTCTTGGCAAGCTGCAATCGATGCT...CTCACAGGGCTGTTGTGAGGAATAGCTAAGTGATTGTAAAGCACTTTGAACGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636938.1
CDS-3UTR CAA 90 bp TGCAACCCATGGTGGATCCAAAGGTACAGTATCAAAATCATGGAACTCTTGCCCATGCTAGTATTTCGTTaGCCTTCCTCTCCTCCTTCT +
Preference number: 5 (lower is better)
Translates to: CNPWWIQRYSIKIMELLPMLVFR*PSSPPS
Trigger: AGAAGGAGGAGAGGAAGGCAAACGAAATACTAGCAT...GGGCAAGAGTTCCATGATTTTGATACTGTACCTTTGGATCCACCATGGGTTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR CAA 90 bp CCCCAAAATAATCACACCAAATGGCCAAAGGGCTTTCTTTATCAGTTGGCCTTACAGTGCCTGGTCACTTaGAAGATTCTTAAGAGGCGC +
Preference number: 5 (lower is better)
Translates to: PQNNHTKWPKGFLYQLALQCLVT*KILKRR
Trigger: GCGCCTCTTAAGAATCTTCAAAGTGACCAGGCACTG...TAAGGCCAACTGATAAAGAAAGCCCTTTGGCCATTTGGTGTGATTATTTTGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636627.1
CDS-3UTR CAA 90 bp ACTGGCGTCACATCACAGAAAACCTTATTTATGAGGTCCCATTGCCCTCGCAATTCAAAGGTGCTCCGCTaGGTTTGCGTTTCATCAAAA +
Preference number: 5 (lower is better)
Translates to: TGVTSQKTLFMRSHCPRNSKVLR*VCVSSK
Trigger: TTTTGATGAAACGCAAACCAAGCGGAGCACCTTTGA...ATTGCGAGGGCAATGGGACCTCATAAATAAGGTTTTCTGTGATGTGACGCCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CAA 90 bp ACTGGCGTCACATCACAGAAAACCTTATTTATGAGGTCCCATTGCCCTCGCAATCTGTTGGCTATCTGGTaGACTTCTGGTTTGTTGTTC +
Preference number: 5 (lower is better)
Translates to: TGVTSQKTLFMRSHCPRNLLAIW*TSGLLF
Trigger: GAACAACAAACCAGAAGTCAACCAGATAGCCAACAG...ATTGCGAGGGCAATGGGACCTCATAAATAAGGTTTTCTGTGATGTGACGCCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CAA 90 bp TGTACAGACTCCAACCACCACTTGGAATCAGCTGAGAATTCAAGATCAGACACCCTGTTGGCTATCTGGTaGACTTCTGGTTTGTTGTTC +
Preference number: 5 (lower is better)
Translates to: CTDSNHHLESAENSRSDTLLAIW*TSGLLF
Trigger: GAACAACAAACCAGAAGTCAACCAGATAGCCAACAG...GGTGTCTGATCTTGAATTCTCAGCTGATTCCAAGTGGTGGTTGGAGTCTGTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636938.1
CDS-3UTR CAA 90 bp CTTCATATCACCCCCAAAATAATCACACCAAATGGCCAAAGGGCTTTCTTTATCCCTACGCGGATCGGGTaGGTCTTGCTAAGAATGAAG +
Preference number: 5 (lower is better)
Translates to: LHITPKIITPNGQRAFFIPTRIG*VLLRMK
Trigger: CTTCATTCTTAGCAAGACCAACCCGATCCGCGTAGG...GATAAAGAAAGCCCTTTGGCCATTTGGTGTGATTATTTTGGGGGTGATATGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636627.1
CDS-3UTR CAA 90 bp CGTATTTCAGAACAGCTAAACAGGAACCAGGACGCAGTGTATTTGGGGGAAAGGGGAAAGCTCCAAAAGTaGTCATCTTCAACAGGATCT +
Preference number: 5 (lower is better)
Translates to: RISEQLNRNQDAVYLGERGKLQK*SSSTGS
Trigger: AGATCCTGTTGAAGATGACAACTTTTGGAGCTTTCC...CCTTTCCCCCAAATACACTGCGTCCTGGTTCCTGTTTAGCTGTTCTGAAATACG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CAA 90 bp GCTGTTTCAGTAGAAATAAGCCCACTTGAGACTTTTCCCTTTCAAGGCCTTAGCATGTCCATGGCATCATaGAACATCTTGGACTGCTCG +
Preference number: 5 (lower is better)
Translates to: AVSVEISPLETFPFQGLSMSMAS*NILDCS
Trigger: CGAGCAGTCCAAGATGTTCAATGATGCCATGGACAT...GCTAAGGCCTTGAAAGGGAAAAGTCTCAAGTGGGCTTATTTCTACTGAAACAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000636938.1
ENST00000638120.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CAA 90 bp TTCTTAAGCAGCACCACCAGTCCCCAGAGGACAAGAGCAGCTATATCTCATCCAAACGTCTGGAAGTTATaGTTCCTATTGATCTGGTTG +
Preference number: 5 (lower is better)
Translates to: FLSSTTSPQRTRAAISHPNVWKL*FLLIWL
Trigger: CAACCAGATCAATAGGAACAATAACTTCCAGACGTT...TGGATGAGATATAGCTGCTCTTGTCCTCTGGGGACTGGTGGTGCTGCTTAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR CAA 90 bp TCCTGTGGACACGTTAAGATGGAACCTGAGGTGTTGCCTGGATTGGTTTTGGCAAACGTCTGGAAGTTATaGTTCCTATTGATCTGGTTG +
Preference number: 5 (lower is better)
Translates to: SCGHVKMEPEVLPGLVLANVWKL*FLLIWL
Trigger: CAACCAGATCAATAGGAACAATAACTTCCAGACGTT...TGCCAAAACCAATCCAGGCAACACCTCAGGTTCCATCTTAACGTGTCCACAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CAA 90 bp TATTTCAGAACAGCTAAACAGGAACCAGGACGCAGTGTATTTGGGGGAAAGGGTGTTTTATCCTTCCCTTaGCCTCAGGGTCATATTCTG +
Preference number: 5 (lower is better)
Translates to: YFRTAKQEPGRSVFGGKGVLSFP*PQGHIL
Trigger: CAGAATATGACCCTGAGGCAAAGGGAAGGATAAAAC...ACCCTTTCCCCCAAATACACTGCGTCCTGGTTCCTGTTTAGCTGTTCTGAAATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CAA 90 bp TATTTCAGAACAGCTAAACAGGAACCAGGACGCAGTGTATTTGGGGGAAAGGGTCTTCTTCTTCTCGTTTaGTTTCCTCAGGCTCGTCAT +
Preference number: 5 (lower is better)
Translates to: YFRTAKQEPGRSVFGGKGLLLLV*FPQARH
Trigger: ATGACGAGCCTGAGGAAACAAAACGAGAAGAAGAAG...ACCCTTTCCCCCAAATACACTGCGTCCTGGTTCCTGTTTAGCTGTTCTGAAATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CAA 90 bp CGTATTTCAGAACAGCTAAACAGGAACCAGGACGCAGTGTATTTGGGGGAAAGGGCAGCTTTGGACATATaGGCATTATTGAGATTGGCA +
Preference number: 5 (lower is better)
Translates to: RISEQLNRNQDAVYLGERAALDI*ALLRLA
Trigger: TGCCAATCTCAATAATGCCAATATGTCCAAAGCTGC...CCTTTCCCCCAAATACACTGCGTCCTGGTTCCTGTTTAGCTGTTCTGAAATACG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CAA 90 bp CGTATTTCAGAACAGCTAAACAGGAACCAGGACGCAGTGTATTTGGGGGAAAGGTTTCCATGGGCAGCTTaGGACATATTGGCATTATTG +
Preference number: 5 (lower is better)
Translates to: RISEQLNRNQDAVYLGERFPWAA*DILALL
Trigger: CAATAATGCCAATATGTCCAAAGCTGCCCATGGAAA...CCTTTCCCCCAAATACACTGCGTCCTGGTTCCTGTTTAGCTGTTCTGAAATACG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CAA 90 bp ACTTACTTACTTACCAGAGGGTGGTTCAAGTCAAACAAACAAAACCAAAGACAGTGCTTGTCGCTGTTTTaGTTCCGGAAGCTGCTGGGG +
Preference number: 5 (lower is better)
Translates to: TYLLTRGWFKSNKQNQRQCLSLF*FRKLLG
Trigger: CCCCAGCAGCTTCCGGAACAAAAACAGCGACAAGCA...CTGTCTTTGGTTTTGTTTGTTTGACTTGAACCACCCTCTGGTAAGTAAGTAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR CAA 90 bp TATCCAAAAGTGGGTTTTCATCAGGACGTACAGTCAGAGTGTGAGTGCATTCTACAAATTTTGGGTCCCTaGCATAGCGTCCCAAGCCTT +
Preference number: 5 (lower is better)
Translates to: YPKVGFHQDVQSECECILQILGP*HSVPSL
Trigger: AAGGCTTGGGACGCTATGCAAGGGACCCAAAATTTG...TAGAATGCACTCACACTCTGACTGTACGTCCTGATGAAAACCCACTTTTGGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR CAA 90 bp CAGTCCCCAGAGGACAAGAGCAGCTATATCTCATCCACCTATGCATTTCTGCACCGATTTCGTGTTTTGTaGCTGACACAAATTTTGGGT +
Preference number: 5 (lower is better)
Translates to: QSPEDKSSYISSTYAFLHRFRVL*LTQILG
Trigger: ACCCAAAATTTGTGTCAGCAACAAAACACGAAATCG...GTGCAGAAATGCATAGGTGGATGAGATATAGCTGCTCTTGTCCTCTGGGGACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR CAA 90 bp AGGAACCAGGAGGATAAGAATATCCATAATTTCAGAGCTGCCCTGGCACAGTACGTCGGCCTAATTCTGTaGACAGAAAATGAAGCCTTG +
Preference number: 5 (lower is better)
Translates to: RNQEDKNIHNFRAALAQYVGLIL*TENEAL
Trigger: CAAGGCTTCATTTTCTGTCAACAGAATTAGGCCGAC...GTACTGTGCCAGGGCAGCTCTGAAATTATGGATATTCTTATCCTCCTGGTTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS TCA 90 bp TGCCACCACCCTAAAACAGAATTGCTTCAGAATATTCTGAAAGACTaGGAGGTGAAAGGAATGGAGGCTGCAGGAAAAGCTCAAGCACAT +
Preference number: 5 (lower is better)
Translates to: CHHPKTELLQNILKD*EVKGMEAAGKAQAH
Trigger: ATGTGCTTGAGCTTTTCCTGCAGCCTCCATTCCTTTCACCTCTCAGTCTTTCAGAATATTCTGAAGCAATTCTGTTTTAGGGTGGTGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636595.1
CDS GCA 90 bp AGACAAATGTCAGTGACAGCCATCCATGGGTTAGGGACAGTATGTTaGTGGGTCATTTCATCATTCAAGGAACAAACAGGCATCAAAGAG +
Preference number: 5 (lower is better)
Translates to: RQMSVTAIHGLGTVC*WVISSFKEQTGIKE
Trigger: CTCTTTGATGCCTGTTTGTTCCTTGAATGATGAAATGACCCAGCAACATACTGTCCCTAACCCATGGATGGCTGTCACTGACATTTGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637081.1
CDS-3UTR CAA 90 bp AACAAACTAGTGTATCTAAGTTTACCTGGTTGCGAGTGCATTATTATTCCAGTTCGGGCAGGTCGGCTGTaGGACGAGTTACCCTGTTTT +
Preference number: 5 (lower is better)
Translates to: NKLVYLSLPGCECIIIPVRAGRL*DELPCF
Trigger: AAAACAGGGTAACTCGTCCAACAGCCGACCTGCCCG...AACTGGAATAATAATGCACTCGCAACCAGGTAAACTTAGATACACTAGTTTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CAA 90 bp TGTAATTCACTTACTTACTTACCAGAGGGTGGTTCAAGTCAAACAAACAAAACCTCAAAGCCTCCAGATTaGCCGCTTGAGTGGTTCCCG +
Preference number: 5 (lower is better)
Translates to: CNSLTYLPEGGSSQTNKTSKPPD*PLEWFP
Trigger: CGGGAACCACTCAAGCGGCAAATCTGGAGGCTTTGA...GGTTTTGTTTGTTTGACTTGAACCACCCTCTGGTAAGTAAGTAAGTGAATTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR CAA 90 bp CAAATGGCCAAAGGGCTTTCTTTATCAGTTGGCCTTAATGCTCTAAATGATACACTACATCTTCTGCGATaGAATCGGTTCCAGCGACGC +
Preference number: 5 (lower is better)
Translates to: QMAKGLSLSVGLNALNDTLHLLR*NRFQRR
Trigger: GCGTCGCTGGAACCGATTCAATCGCAGAAGATGTAG...TGTATCATTTAGAGCATTAAGGCCAACTGATAAAGAAAGCCCTTTGGCCATTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636627.1
CDS-3UTR CAA 90 bp CAGTCCCCAGAGGACAAGAGCAGCTATATCTCATCCACCTATGCATTTCTGCACTTTGTTGGCAATATCTaGAATCTGTGTCAACCAATC +
Preference number: 5 (lower is better)
Translates to: QSPEDKSSYISSTYAFLHFVGNI*NLCQPI
Trigger: GATTGGTTGACACAGATTCAAGATATTGCCAACAAA...GTGCAGAAATGCATAGGTGGATGAGATATAGCTGCTCTTGTCCTCTGGGGACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR CAA 90 bp TCCTGTGGACACGTTAAGATGGAACCTGAGGTGTTGCCTGGATTGGTTTTGGCAAAGCAATCAAACCGGTaGAAAAGAGAGACGAAATAT +
Preference number: 5 (lower is better)
Translates to: SCGHVKMEPEVLPGLVLAKQSNR*KRETKY
Trigger: ATATTTCGTCTCTCTTTTCAACCGGTTTGATTGCTT...TGCCAAAACCAATCCAGGCAACACCTCAGGTTCCATCTTAACGTGTCCACAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR CAA 90 bp ATTCAAGATCAGACACCCTTATCGACCAACATCTTGGGCAAAAATCTGCTATTCCAGTGCCTGGTCACTTaGAAGATTCTTAAGAGGCGC +
Preference number: 5 (lower is better)
Translates to: IQDQTPLSTNILGKNLLFQCLVT*KILKRR
Trigger: GCGCCTCTTAAGAATCTTCAAAGTGACCAGGCACTG...GAATAGCAGATTTTTGCCCAAGATGTTGGTCGATAAGGGTGTCTGATCTTGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636938.1
CDS-3UTR CAA 90 bp GATGTGAAAATGCAACCTGCAGGGTTACCTCTGTTGACATCTTTGTGCATTGCCGGTGCTCCGCTTGGTTaGCGTTTCATCAAAATTAAA +
Preference number: 5 (lower is better)
Translates to: DVKMQPAGLPLLTSLCIAGAPLG*RFIKIK
Trigger: TTTAATTTTGATGAAACGCAAACCAAGCGGAGCACC...GGCAATGCACAAAGATGTCAACAGAGGTAACCCTGCAGGTTGCATTTTCACATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636938.1
CDS-3UTR CAA 90 bp GTTTCAGTAGAAATAAGCCCACTTGAGACTTTTCCCTTTCAAGGCCTTAGCCACCTGTTGGCTATCTGGTaGACTTCTGGTTTGTTGTTC +
Preference number: 5 (lower is better)
Translates to: VSVEISPLETFPFQGLSHLLAIW*TSGLLF
Trigger: GAACAACAAACCAGAAGTCAACCAGATAGCCAACAG...GTGGCTAAGGCCTTGAAAGGGAAAAGTCTCAAGTGGGCTTATTTCTACTGAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR CAA 90 bp GTGTTTCCTGTGGACACGTTAAGATGGAACCTGAGGTGTTGCCTGGATTGGTTTTCATCAATTGTAACCTaGTTGTCACTGTTGGCTATC +
Preference number: 5 (lower is better)
Translates to: VFPVDTLRWNLRCCLDWFSSIVT*LSLLAI
Trigger: GATAGCCAACAGTGACAACAAGGTTACAATTGATGA...AAACCAATCCAGGCAACACCTCAGGTTCCATCTTAACGTGTCCACAGGAAACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR CAA 90 bp AACAAACTAGTGTATCTAAGTTTACCTGGTTGCGAGTGCATTATTATTCCAGTTTGGTGGTTGATGAGCTaGTGGCAGCCTACGCGGATC +
Preference number: 5 (lower is better)
Translates to: NKLVYLSLPGCECIIIPVWWLMS*WQPTRI
Trigger: GATCCGCGTAGGCTGCCACAAGCTCATCAACCACCA...AACTGGAATAATAATGCACTCGCAACCAGGTAAACTTAGATACACTAGTTTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CAA 90 bp GTCACATCACAGAAAACCTTATTTATGAGGTCCCATTGCCCTCGCAATAATCACATGTCCATGGCATCATaGAACATCTTGGACTGCTCG +
Preference number: 5 (lower is better)
Translates to: VTSQKTLFMRSHCPRNNHMSMAS*NILDCS
Trigger: CGAGCAGTCCAAGATGTTCAATGATGCCATGGACAT...GTGATTATTGCGAGGGCAATGGGACCTCATAAATAAGGTTTTCTGTGATGTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CAA 90 bp GACAGTTGCAACCCATGGTGGATCCAAAGGTACAGTATCAAAATCATGGAACTCGTTTTATCCTTCCCTTaGCCTCAGGGTCATATTCTG +
Preference number: 5 (lower is better)
Translates to: DSCNPWWIQRYSIKIMELVLSFP*PQGHIL
Trigger: CAGAATATGACCCTGAGGCAAAGGGAAGGATAAAAC...GAGTTCCATGATTTTGATACTGTACCTTTGGATCCACCATGGGTTGCAACTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR CAA 90 bp TCACTGAAGCCTCTCCTTTGTCTGGAATGTTCTTCATATCACCCCCAAAATAATATGGCAACTAATCTCTaGCACGCTACCCTGTGTGGA +
Preference number: 5 (lower is better)
Translates to: SLKPLLCLECSSYHPQNNMATNL*HATLCG
Trigger: TCCACACAGGGTAGCGTGCAAGAGATTAGTTGCCAT...ATTATTTTGGGGGTGATATGAAGAACATTCCAGACAAAGGAGAGGCTTCAGTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636627.1
CDS-3UTR CAA 90 bp ACTGACTTTGGAAAAGATCATCGCCTCTATCAGACACTTAGGGTCCTGGTCTGGAGGTTTATGGCTTTCTaGAGGCATGACATCTCTTAT +
Preference number: 5 (lower is better)
Translates to: TDFGKDHRLYQTLRVLVWRFMAF*RHDISY
Trigger: ATAAGAGATGTCATGCCTCAAGAAAGCCATAAACCT...CCAGACCAGGACCCTAAGTGTCTGATAGAGGCGATGATCTTTTCCAAAGTCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR CAA 90 bp CGTATTTCAGAACAGCTAAACAGGAACCAGGACGCAGTGTATTTGGGGGAAAGGTCTAAGTTTACCTGGTaGCGAGTGCATTATTATTCC +
Preference number: 5 (lower is better)
Translates to: RISEQLNRNQDAVYLGERSKFTW*RVHYYS
Trigger: GGAATAATAATGCACTCGCAACCAGGTAAACTTAGA...CCTTTCCCCCAAATACACTGCGTCCTGGTTCCTGTTTAGCTGTTCTGAAATACG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS GCA 90 bp TCCTATGGAATTATGGTTATGATGGTTATGACACACCGAATTTCCTaGTGGAGGAAACAGCGGTTTCTCAGTATCACTTGCAGGTGGAAT +
Preference number: 5 (lower is better)
Translates to: SYGIMVMMVMTHRIS*WRKQRFLSITCRWN
Trigger: ATTCCACCTGCAAGTGATACTGAGAAACCGCTGTTTCCTCCAGCAGGAAATTCGGTGTGTCATAACCATCATAACCATAATTCCATAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000481478.1
ENST00000636570.1
ENST00000636629.1
ENST00000636999.2
ENST00000637424.1
CDS GCA 90 bp TCCATATACCATTTCTTGGTTTGTAATTCTGAACAGCTCATTTTCTaGACTGTAGTGACAGCTCCAACCAACCTCATAGTTGAGCTGGGC +
Preference number: 5 (lower is better)
Translates to: SIYHFLVCNSEQLIF*TVVTAPTNLIVELG
Trigger: GCCCAGCTCAACTATGAGGTTGGTTGGAGCTGTCACTACAGTGCAGAAAATGAGCTGTTCAGAATTACAAACCAAGAAATGGTATATGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637589.2
CDS-3UTR CAA 90 bp ATCATGGAACTCTTGCCCAAAGAAAAGACTGCAAATAGTCATCTGGTATATCTTAAGGCACGGAGGGCTTaGACATCAAAGCCTCCAGAT +
Preference number: 5 (lower is better)
Translates to: IMELLPKEKTANSHLVYLKARRA*TSKPPD
Trigger: ATCTGGAGGCTTTGATGTCAAAGCCCTCCGTGCCTT...AAGATATACCAGATGACTATTTGCAGTCTTTTCTTTGGGCAAGAGTTCCATGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR CAA 90 bp CCCCAAAATAATCACACCAAATGGCCAAAGGGCTTTCTTTATCAGTTGGCCTTAATGCTAGTATTTCGTTaGCCTTCCTCTCCTCCTTCT +
Preference number: 5 (lower is better)
Translates to: PQNNHTKWPKGFLYQLALMLVFR*PSSPPS
Trigger: AGAAGGAGGAGAGGAAGGCAAACGAAATACTAGCAT...TAAGGCCAACTGATAAAGAAAGCCCTTTGGCCATTTGGTGTGATTATTTTGGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636627.1
CDS-3UTR CAA 90 bp GAATGTTCTTCATATCACCCCCAAAATAATCACACCAAATGGCCAAAGGGCTTTAGAGACGAAATATGCTaGGAGGCCCAAGCTGTACAT +
Preference number: 5 (lower is better)
Translates to: ECSSYHPQNNHTKWPKGFRDEIC*EAQAVH
Trigger: ATGTACAGCTTGGGCCTCCAAGCATATTTCGTCTCT...AAAGCCCTTTGGCCATTTGGTGTGATTATTTTGGGGGTGATATGAAGAACATTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636627.1
CDS-3UTR CAA 90 bp ATGTCAGGAAAGAGTCATTTACAAACCTTGAAGTGTTTTTGCCTGGATCAGAGTCAGTGCCTGGTCACTTaGAAGATTCTTAAGAGGCGC +
Preference number: 5 (lower is better)
Translates to: MSGKSHLQTLKCFCLDQSQCLVT*KILKRR
Trigger: GCGCCTCTTAAGAATCTTCAAAGTGACCAGGCACTG...ACTCTGATCCAGGCAAAAACACTTCAAGGTTTGTAAATGACTCTTTCCTGACAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR CAA 90 bp AAGGGAAAACTGTTAAGCTTTGTACGTTCCCTTTCACGAAAAAGAACCACCGTGTCAAAGGTGCTCCGCTaGGTTTGCGTTTCATCAAAA +
Preference number: 5 (lower is better)
Translates to: KGKLLSFVRSLSRKRTTVSKVLR*VCVSSK
Trigger: TTTTGATGAAACGCAAACCAAGCGGAGCACCTTTGA...CACGGTGGTTCTTTTTCGTGAAAGGGAACGTACAAAGCTTAACAGTTTTCCCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR CAA 90 bp AAACCGACCATCGGAGTGATATTCTCTTATGTAAACTGGCGTCACATCACAGAACTGTTGGCTATCTGGTaGACTTCTGGTTTGTTGTTC +
Preference number: 5 (lower is better)
Translates to: KPTIGVIFSYVNWRHITELLAIW*TSGLLF
Trigger: GAACAACAAACCAGAAGTCAACCAGATAGCCAACAG...TTCTGTGATGTGACGCCAGTTTACATAAGAGAATATCACTCCGATGGTCGGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CAA 90 bp GCTGTTTCAGTAGAAATAAGCCCACTTGAGACTTTTCCCTTTCAAGGCCTTAGCTCAATTGTAACCTTGTaGTCACTGTTGGCTATCTGG +
Preference number: 5 (lower is better)
Translates to: AVSVEISPLETFPFQGLSSIVTL*SLLAIW
Trigger: CCAGATAGCCAACAGTGACAACAAGGTTACAATTGA...GCTAAGGCCTTGAAAGGGAAAAGTCTCAAGTGGGCTTATTTCTACTGAAACAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR CAA 90 bp GTTTCAGTAGAAATAAGCCCACTTGAGACTTTTCCCTTTCAAGGCCTTAGCCACTCAATTGTAACCTTGTaGTCACTGTTGGCTATCTGG +
Preference number: 5 (lower is better)
Translates to: VSVEISPLETFPFQGLSHSIVTL*SLLAIW
Trigger: CCAGATAGCCAACAGTGACAACAAGGTTACAATTGA...GTGGCTAAGGCCTTGAAAGGGAAAAGTCTCAAGTGGGCTTATTTCTACTGAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR CAA 90 bp CACCCCCAAAATAATCACACCAAATGGCCAAAGGGCTTTCTTTATCAGTTGGCCTCATCAATTGTAACCTaGTTGTCACTGTTGGCTATC +
Preference number: 5 (lower is better)
Translates to: HPQNNHTKWPKGFLYQLASSIVT*LSLLAI
Trigger: GATAGCCAACAGTGACAACAAGGTTACAATTGATGA...GGCCAACTGATAAAGAAAGCCCTTTGGCCATTTGGTGTGATTATTTTGGGGGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636627.1
CDS-3UTR CAA 90 bp AGTGGGGAACTACAATTATTAGGACCCATGGATATTGCTGCAGTTCAAATACAACGGATCGGGTTGGTCTaGCTAAGAATGAAGAAAGCG +
Preference number: 5 (lower is better)
Translates to: SGELQLLGPMDIAAVQIQRIGLV*LRMKKA
Trigger: CGCTTTCTTCATTCTTAGCAAGACCAACCCGATCCG...TTGTATTTGAACTGCAGCAATATCCATGGGTCCTAATAATTGTAGTTCCCCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR CAA 90 bp CACCAAATGGCCAAAGGGCTTTCTTTATCAGTTGGCCTTAATGCTCTAAATGATAAGACAAGGATGAGGTaGGTGAAGATGTGGTGGTTG +
Preference number: 5 (lower is better)
Translates to: HQMAKGLSLSVGLNALNDKTRMR*VKMWWL
Trigger: CAACCACCACATCTTCACCAACCTCATCCTTGTCTT...ATCATTTAGAGCATTAAGGCCAACTGATAAAGAAAGCCCTTTGGCCATTTGGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636627.1
CDS-3UTR CAA 90 bp GCTGTTTCAGTAGAAATAAGCCCACTTGAGACTTTTCCCTTTCAAGGCCTTAGCGGAAAGCTCCAAAAGTaGTCATCTTCAACAGGATCT +
Preference number: 5 (lower is better)
Translates to: AVSVEISPLETFPFQGLSGKLQK*SSSTGS
Trigger: AGATCCTGTTGAAGATGACAACTTTTGGAGCTTTCC...GCTAAGGCCTTGAAAGGGAAAAGTCTCAAGTGGGCTTATTTCTACTGAAACAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR CAA 90 bp ATCATGGAACTCTTGCCCAAAGAAAAGACTGCAAATAGTCATCTGGTATATCTTCTGCAGAAGGCCCCTTaGTGGAGGAAAGCTCCAAAA +
Preference number: 5 (lower is better)
Translates to: IMELLPKEKTANSHLVYLLQKAP*WRKAPK
Trigger: TTTTGGAGCTTTCCTCCACAAAGGGGCCTTCTGCAG...AAGATATACCAGATGACTATTTGCAGTCTTTTCTTTGGGCAAGAGTTCCATGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR CAA 90 bp GTTCTTCATATCACCCCCAAAATAATCACACCAAATGGCCAAAGGGCTTTCTTTTCTTCAGGGTTACTTTaGGCTTCATCCGTACAGCGA +
Preference number: 5 (lower is better)
Translates to: VLHITPKIITPNGQRAFFSSGLL*ASSVQR
Trigger: TCGCTGTACGGATGAAGCCAAAAGTAACCCTGAAGA...AAAGAAAGCCCTTTGGCCATTTGGTGTGATTATTTTGGGGGTGATATGAAGAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000636627.1
CDS-3UTR CAA 90 bp TCACTGAAGCCTCTCCTTTGTCTGGAATGTTCTTCATATCACCCCCAAAATAATATGTCCATGGCATCATaGAACATCTTGGACTGCTCG +
Preference number: 5 (lower is better)
Translates to: SLKPLLCLECSSYHPQNNMSMAS*NILDCS
Trigger: CGAGCAGTCCAAGATGTTCAATGATGCCATGGACAT...ATTATTTTGGGGGTGATATGAAGAACATTCCAGACAAAGGAGAGGCTTCAGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636627.1
CDS-3UTR CAA 90 bp TATTTCAGAACAGCTAAACAGGAACCAGGACGCAGTGTATTTGGGGGAAAGGGTAACGTCTGGAAGTTATaGTTCCTATTGATCTGGTTG +
Preference number: 5 (lower is better)
Translates to: YFRTAKQEPGRSVFGGKGNVWKL*FLLIWL
Trigger: CAACCAGATCAATAGGAACAATAACTTCCAGACGTT...ACCCTTTCCCCCAAATACACTGCGTCCTGGTTCCTGTTTAGCTGTTCTGAAATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CAA 90 bp CAGGACTTTGGAATGGAGTCAGATACCCACCTTAGGCAGGTCTGCTTAATCTTTAACGTCTGGAAGTTATaGTTCCTATTGATCTGGTTG +
Preference number: 5 (lower is better)
Translates to: QDFGMESDTHLRQVCLIFNVWKL*FLLIWL
Trigger: CAACCAGATCAATAGGAACAATAACTTCCAGACGTT...AAAGATTAAGCAGACCTGCCTAAGGTGGGTATCTGACTCCATTCCAAAGTCCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CAA 90 bp AAGGGAAAACTGTTAAGCTTTGTACGTTCCCTTTCACGAAAAAGAACCACCGTGCTTTCCCACCAGTCCTaGTTCTTTCCGTTTCTTGAA +
Preference number: 5 (lower is better)
Translates to: KGKLLSFVRSLSRKRTTVLSHQS*FFPFLE
Trigger: TTCAAGAAACGGAAAGAACAAGGACTGGTGGGAAAG...CACGGTGGTTCTTTTTCGTGAAAGGGAACGTACAAAGCTTAACAGTTTTCCCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CAA 90 bp TATTTCAGAACAGCTAAACAGGAACCAGGACGCAGTGTATTTGGGGGAAAGGGTAGGGCACCATTTCTTTaGAACACATCATCTTCTTCT +
Preference number: 5 (lower is better)
Translates to: YFRTAKQEPGRSVFGGKGRAPFL*NTSSSS
Trigger: AGAAGAAGATGATGTGTTCAAAAGAAATGGTGCCCT...ACCCTTTCCCCCAAATACACTGCGTCCTGGTTCCTGTTTAGCTGTTCTGAAATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CAA 90 bp ACTGGCGTCACATCACAGAAAACCTTATTTATGAGGTCCCATTGCCCTCGCAATTTAAAAATGGATATGTaGGGCCCAGTGACTGATATG +
Preference number: 5 (lower is better)
Translates to: TGVTSQKTLFMRSHCPRNLKMDM*GPVTDM
Trigger: CATATCAGTCACTGGGCCCAACATATCCATTTTTAA...ATTGCGAGGGCAATGGGACCTCATAAATAAGGTTTTCTGTGATGTGACGCCAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CAA 90 bp TATTTCAGAACAGCTAAACAGGAACCAGGACGCAGTGTATTTGGGGGAAAGGGTTTAAAAATGGATATGTaGGGCCCAGTGACTGATATG +
Preference number: 5 (lower is better)
Translates to: YFRTAKQEPGRSVFGGKGLKMDM*GPVTDM
Trigger: CATATCAGTCACTGGGCCCAACATATCCATTTTTAA...ACCCTTTCCCCCAAATACACTGCGTCCTGGTTCCTGTTTAGCTGTTCTGAAATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CAA 90 bp TATTTCAGAACAGCTAAACAGGAACCAGGACGCAGTGTATTTGGGGGAAAGGGTTCTAAGTTTACCTGGTaGCGAGTGCATTATTATTCC +
Preference number: 5 (lower is better)
Translates to: YFRTAKQEPGRSVFGGKGSKFTW*RVHYYS
Trigger: GGAATAATAATGCACTCGCAACCAGGTAAACTTAGA...ACCCTTTCCCCCAAATACACTGCGTCCTGGTTCCTGTTTAGCTGTTCTGAAATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CAA 90 bp ACTTACTTACTTACCAGAGGGTGGTTCAAGTCAAACAAACAAAACCAAAGACAGAGGCAACAATACGATTaGTACAGACCCCGACACTCC +
Preference number: 5 (lower is better)
Translates to: TYLLTRGWFKSNKQNQRQRQQYD*YRPRHS
Trigger: GGAGTGTCGGGGTCTGTACAAATCGTATTGTTGCCT...CTGTCTTTGGTTTTGTTTGTTTGACTTGAACCACCCTCTGGTAAGTAAGTAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR CAA 90 bp TATTTCAGAACAGCTAAACAGGAACCAGGACGCAGTGTATTTGGGGGAAAGGGTTCAGCCCTCATTCAATaGCATATAAAAGCCCTCAAA +
Preference number: 5 (lower is better)
Translates to: YFRTAKQEPGRSVFGGKGSALIQ*HIKALK
Trigger: TTTGAGGGCTTTTATATGCAATTGAATGAGGGCTGA...ACCCTTTCCCCCAAATACACTGCGTCCTGGTTCCTGTTTAGCTGTTCTGAAATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR CAA 90 bp ATGTCAGGAAAGAGTCATTTACAAACCTTGAAGTGTTTTTGCCTGGATCAGAGTGGTATTAGGTTACCATaGGCACCGAAGGAACCAGGA +
Preference number: 5 (lower is better)
Translates to: MSGKSHLQTLKCFCLDQSGIRLP*APKEPG
Trigger: TCCTGGTTCCTTCGGTGCCAATGGTAACCTAATACC...ACTCTGATCCAGGCAAAAACACTTCAAGGTTTGTAAATGACTCTTTCCTGACAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR CAA 90 bp TGCAACCCATGGTGGATCCAAAGGTACAGTATCAAAATCATGGAACTCTTGCCCTATACATGTAATTTTTaGCTGCAAAGGAGAACTGGC +
Preference number: 5 (lower is better)
Translates to: CNPWWIQRYSIKIMELLPYTCNF*LQRRTG
Trigger: GCCAGTTCTCCTTTGCAGCAAAAAATTACATGTATA...GGGCAAGAGTTCCATGATTTTGATACTGTACCTTTGGATCCACCATGGGTTGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR CAA 90 bp ATGTCAGGAAAGAGTCATTTACAAACCTTGAAGTGTTTTTGCCTGGATCAGAGTTTGCTGACGTTTTCTTaGGGAGAGAGATCCTACAGG +
Preference number: 5 (lower is better)
Translates to: MSGKSHLQTLKCFCLDQSLLTFS*GERSYR
Trigger: CCTGTAGGATCTCTCTCCCAAAGAAAACGTCAGCAA...ACTCTGATCCAGGCAAAAACACTTCAAGGTTTGTAAATGACTCTTTCCTGACAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR CAA 90 bp AACAAACTAGTGTATCTAAGTTTACCTGGTTGCGAGTGCATTATTATTCCAGTTAAGGCACGGAGGGCTTaGACATCAAAGCCTCCAGAT +
Preference number: 5 (lower is better)
Translates to: NKLVYLSLPGCECIIIPVKARRA*TSKPPD
Trigger: ATCTGGAGGCTTTGATGTCAAAGCCCTCCGTGCCTT...AACTGGAATAATAATGCACTCGCAACCAGGTAAACTTAGATACACTAGTTTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CAA 90 bp TTAAGATGTGAAAATGCAACCTGCAGGGTTACCTCTGTTGACATCTTTGTGCATATGCTAGTATTTCGTTaGCCTTCCTCTCCTCCTTCT +
Preference number: 5 (lower is better)
Translates to: LRCENATCRVTSVDIFVHMLVFR*PSSPPS
Trigger: AGAAGGAGGAGAGGAAGGCAAACGAAATACTAGCAT...ATGCACAAAGATGTCAACAGAGGTAACCCTGCAGGTTGCATTTTCACATCTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636938.1
CDS-3UTR CAA 90 bp AGGAACCAGGAGGATAAGAATATCCATAATTTCAGAGCTGCCCTGGCACAGTACTTTGTTGGCAATATCTaGAATCTGTGTCAACCAATC +
Preference number: 5 (lower is better)
Translates to: RNQEDKNIHNFRAALAQYFVGNI*NLCQPI
Trigger: GATTGGTTGACACAGATTCAAGATATTGCCAACAAA...GTACTGTGCCAGGGCAGCTCTGAAATTATGGATATTCTTATCCTCCTGGTTCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR CAA 90 bp AAACCGACCATCGGAGTGATATTCTCTTATGTAAACTGGCGTCACATCACAGAAGGTGCTCCGCTTGGTTaGCGTTTCATCAAAATTAAA +
Preference number: 5 (lower is better)
Translates to: KPTIGVIFSYVNWRHITEGAPLG*RFIKIK
Trigger: TTTAATTTTGATGAAACGCAAACCAAGCGGAGCACC...TTCTGTGATGTGACGCCAGTTTACATAAGAGAATATCACTCCGATGGTCGGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CAA 90 bp AATGTTCTTCATATCACCCCCAAAATAATCACACCAAATGGCCAAAGGGCTTTCTCAAAGGTGCTCCGCTaGGTTTGCGTTTCATCAAAA +
Preference number: 5 (lower is better)
Translates to: NVLHITPKIITPNGQRAFSKVLR*VCVSSK
Trigger: TTTTGATGAAACGCAAACCAAGCGGAGCACCTTTGA...GAAAGCCCTTTGGCCATTTGGTGTGATTATTTTGGGGGTGATATGAAGAACATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636627.1
CDS-3UTR CAA 90 bp GAATGTTCTTCATATCACCCCCAAAATAATCACACCAAATGGCCAAAGGGCTTTCTGTTGGCTATCTGGTaGACTTCTGGTTTGTTGTTC +
Preference number: 5 (lower is better)
Translates to: ECSSYHPQNNHTKWPKGFLLAIW*TSGLLF
Trigger: GAACAACAAACCAGAAGTCAACCAGATAGCCAACAG...AAAGCCCTTTGGCCATTTGGTGTGATTATTTTGGGGGTGATATGAAGAACATTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636627.1
CDS-3UTR CAA 90 bp GTTCTTCATATCACCCCCAAAATAATCACACCAAATGGCCAAAGGGCTTTCTTTACCTTGTTGTCACTGTaGGCTATCTGGTTGACTTCT +
Preference number: 5 (lower is better)
Translates to: VLHITPKIITPNGQRAFFTLLSL*AIWLTS
Trigger: AGAAGTCAACCAGATAGCCAACAGTGACAACAAGGT...AAAGAAAGCCCTTTGGCCATTTGGTGTGATTATTTTGGGGGTGATATGAAGAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636627.1
CDS-3UTR CAA 90 bp AAACCGACCATCGGAGTGATATTCTCTTATGTAAACTGGCGTCACATCACAGAATCAATTGTAACCTTGTaGTCACTGTTGGCTATCTGG +
Preference number: 5 (lower is better)
Translates to: KPTIGVIFSYVNWRHITESIVTL*SLLAIW
Trigger: CCAGATAGCCAACAGTGACAACAAGGTTACAATTGA...TTCTGTGATGTGACGCCAGTTTACATAAGAGAATATCACTCCGATGGTCGGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CAA 90 bp ATGTCAGGAAAGAGTCATTTACAAACCTTGAAGTGTTTTTGCCTGGATCAGAGTTCTTCAGGGTTACTTTaGGCTTCATCCGTACAGCGA +
Preference number: 5 (lower is better)
Translates to: MSGKSHLQTLKCFCLDQSSSGLL*ASSVQR
Trigger: TCGCTGTACGGATGAAGCCAAAAGTAACCCTGAAGA...ACTCTGATCCAGGCAAAAACACTTCAAGGTTTGTAAATGACTCTTTCCTGACAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR CAA 90 bp GTTTCAGTAGAAATAAGCCCACTTGAGACTTTTCCCTTTCAAGGCCTTAGCCACTTCCTATTGATCTGGTaGTTATCTCTCATGGCAACT +
Preference number: 5 (lower is better)
Translates to: VSVEISPLETFPFQGLSHFLLIW*LSLMAT
Trigger: AGTTGCCATGAGAGATAACAACCAGATCAATAGGAA...GTGGCTAAGGCCTTGAAAGGGAAAAGTCTCAAGTGGGCTTATTTCTACTGAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000636938.1
ENST00000638120.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CAA 90 bp GCTGTTTCAGTAGAAATAAGCCCACTTGAGACTTTTCCCTTTCAAGGCCTTAGCAACGTCTGGAAGTTATaGTTCCTATTGATCTGGTTG +
Preference number: 5 (lower is better)
Translates to: AVSVEISPLETFPFQGLSNVWKL*FLLIWL
Trigger: CAACCAGATCAATAGGAACAATAACTTCCAGACGTT...GCTAAGGCCTTGAAAGGGAAAAGTCTCAAGTGGGCTTATTTCTACTGAAACAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000636938.1
ENST00000638120.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CAA 90 bp TTGCAAACACTCTCTGGACTTTCTGGAGACACTAGCATTAAAACCAAAGCACTGACAGCCACAAACAGATaGATGATCAGAAATGCACAG +
Preference number: 5 (lower is better)
Translates to: LQTLSGLSGDTSIKTKALTATNR*MIRNAQ
Trigger: CTGTGCATTTCTGATCATCAATCTGTTTGTGGCTGT...CAGTGCTTTGGTTTTAATGCTAGTGTCTCCAGAAAGTCCAGAGAGTGTTTGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636627.1
CDS-3UTR CAA 90 bp AAGGGAAAACTGTTAAGCTTTGTACGTTCCCTTTCACGAAAAAGAACCACCGTGACAGCCACAAACAGATaGATGATCAGAAATGCACAG +
Preference number: 5 (lower is better)
Translates to: KGKLLSFVRSLSRKRTTVTATNR*MIRNAQ
Trigger: CTGTGCATTTCTGATCATCAATCTGTTTGTGGCTGT...CACGGTGGTTCTTTTTCGTGAAAGGGAACGTACAAAGCTTAACAGTTTTCCCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CAA 90 bp TTGGACCAAAATTGCTACCTATCATCTATCTTTTTGATTGCAGGGAATCCCTGCGTTTTATCCTTCCCTTaGCCTCAGGGTCATATTCTG +
Preference number: 5 (lower is better)
Translates to: LDQNCYLSSIFLIAGNPCVLSFP*PQGHIL
Trigger: CAGAATATGACCCTGAGGCAAAGGGAAGGATAAAAC...GCAGGGATTCCCTGCAATCAAAAAGATAGATGATAGGTAGCAATTTTGGTCCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR CAA 90 bp GAATGTTCTTCATATCACCCCCAAAATAATCACACCAAATGGCCAAAGGGCTTTGTTTTATCCTTCCCTTaGCCTCAGGGTCATATTCTG +
Preference number: 5 (lower is better)
Translates to: ECSSYHPQNNHTKWPKGFVLSFP*PQGHIL
Trigger: CAGAATATGACCCTGAGGCAAAGGGAAGGATAAAAC...AAAGCCCTTTGGCCATTTGGTGTGATTATTTTGGGGGTGATATGAAGAACATTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000636627.1
CDS-3UTR CAA 90 bp ACTGGCGTCACATCACAGAAAACCTTATTTATGAGGTCCCATTGCCCTCGCAATGACATATTGGCATTATaGAGATTGGCATTTGTTGAG +
Preference number: 5 (lower is better)
Translates to: TGVTSQKTLFMRSHCPRNDILAL*RLAFVE
Trigger: CTCAACAAATGCCAATCTCAATAATGCCAATATGTC...ATTGCGAGGGCAATGGGACCTCATAAATAAGGTTTTCTGTGATGTGACGCCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CAA 90 bp AGTGGGGAACTACAATTATTAGGACCCATGGATATTGCTGCAGTTCAAATACAACAAAACCAAAGACAGTaGCAACCCATGGTGGATCCA +
Preference number: 5 (lower is better)
Translates to: SGELQLLGPMDIAAVQIQQNQRQ*QPMVDP
Trigger: TGGATCCACCATGGGTTGCAACTGTCTTTGGTTTTG...TTGTATTTGAACTGCAGCAATATCCATGGGTCCTAATAATTGTAGTTCCCCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR CAA 90 bp GTTTCAGTAGAAATAAGCCCACTTGAGACTTTTCCCTTTCAAGGCCTTAGCCACTTATCGACCAACATCTaGGGCAAAAATCTGCTATTC +
Preference number: 5 (lower is better)
Translates to: VSVEISPLETFPFQGLSHLSTNI*GKNLLF
Trigger: GAATAGCAGATTTTTGCCCAAGATGTTGGTCGATAA...GTGGCTAAGGCCTTGAAAGGGAAAAGTCTCAAGTGGGCTTATTTCTACTGAAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636938.1
CDS GCA 90 bp AACAACGTAGGGGAATACAGTTGGCAAGAGATAACTCTGATTCCATaGCACCACCCTAAAACAGAATTGCTTCAGAATATTCTGAAAGAC +
Preference number: 5 (lower is better)
Translates to: NNVGEYSWQEITLIP*HHPKTELLQNILKD
Trigger: GTCTTTCAGAATATTCTGAAGCAATTCTGTTTTAGGGTGGTGGCATGGAATCAGAGTTATCTCTTGCCAACTGTATTCCCCTACGTTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636595.1
CDS-3UTR CAA 90 bp GAATGTTCTTCATATCACCCCCAAAATAATCACACCAAATGGCCAAAGGGCTTTGGTGCTCCGCTTGGTTaGCGTTTCATCAAAATTAAA +
Preference number: 5 (lower is better)
Translates to: ECSSYHPQNNHTKWPKGFGAPLG*RFIKIK
Trigger: TTTAATTTTGATGAAACGCAAACCAAGCGGAGCACC...AAAGCCCTTTGGCCATTTGGTGTGATTATTTTGGGGGTGATATGAAGAACATTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000636627.1
CDS-3UTR CAA 90 bp CAAATGGCCAAAGGGCTTTCTTTATCAGTTGGCCTTAATGCTCTAAATGATACACACTGTGAGAAGTGCTaGAGGGAAATTGTCAAAGGT +
Preference number: 5 (lower is better)
Translates to: QMAKGLSLSVGLNALNDTHCEKC*REIVKG
Trigger: ACCTTTGACAATTTCCCTCAAGCACTTCTCACAGTG...TGTATCATTTAGAGCATTAAGGCCAACTGATAAAGAAAGCCCTTTGGCCATTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636627.1
CDS-3UTR CAA 90 bp AATGTTCTTCATATCACCCCCAAAATAATCACACCAAATGGCCAAAGGGCTTTCTCAATTGTAACCTTGTaGTCACTGTTGGCTATCTGG +
Preference number: 5 (lower is better)
Translates to: NVLHITPKIITPNGQRAFSIVTL*SLLAIW
Trigger: CCAGATAGCCAACAGTGACAACAAGGTTACAATTGA...GAAAGCCCTTTGGCCATTTGGTGTGATTATTTTGGGGGTGATATGAAGAACATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636627.1
CDS-3UTR CAA 90 bp CTTCATATCACCCCCAAAATAATCACACCAAATGGCCAAAGGGCTTTCTTTATCGGAAAGCTCCAAAAGTaGTCATCTTCAACAGGATCT +
Preference number: 5 (lower is better)
Translates to: LHITPKIITPNGQRAFFIGKLQK*SSSTGS
Trigger: AGATCCTGTTGAAGATGACAACTTTTGGAGCTTTCC...GATAAAGAAAGCCCTTTGGCCATTTGGTGTGATTATTTTGGGGGTGATATGAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000636627.1
CDS-3UTR CAA 90 bp TGTAATTCACTTACTTACTTACCAGAGGGTGGTTCAAGTCAAACAAACAAAACCTCTTCAGGGTTACTTTaGGCTTCATCCGTACAGCGA +
Preference number: 5 (lower is better)
Translates to: CNSLTYLPEGGSSQTNKTSSGLL*ASSVQR
Trigger: TCGCTGTACGGATGAAGCCAAAAGTAACCCTGAAGA...GGTTTTGTTTGTTTGACTTGAACCACCCTCTGGTAAGTAAGTAAGTGAATTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR CAA 90 bp GTCACATCACAGAAAACCTTATTTATGAGGTCCCATTGCCCTCGCAATAATCACTTCCTATTGATCTGGTaGTTATCTCTCATGGCAACT +
Preference number: 5 (lower is better)
Translates to: VTSQKTLFMRSHCPRNNHFLLIW*LSLMAT
Trigger: AGTTGCCATGAGAGATAACAACCAGATCAATAGGAA...GTGATTATTGCGAGGGCAATGGGACCTCATAAATAAGGTTTTCTGTGATGTGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CAA 90 bp AACAAACTAGTGTATCTAAGTTTACCTGGTTGCGAGTGCATTATTATTCCAGTTAGGTTCCCTTCGGTCTaGATCTTAAGAGCCGTTCGA +
Preference number: 5 (lower is better)
Translates to: NKLVYLSLPGCECIIIPVRFPSV*ILRAVR
Trigger: TCGAACGGCTCTTAAGATCAAGACCGAAGGGAACCT...AACTGGAATAATAATGCACTCGCAACCAGGTAAACTTAGATACACTAGTTTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CAA 90 bp AGACAGTTGCAACCCATGGTGGATCCAAAGGTACAGTATCAAAATCATGGAACTCGATTTCGTGTTTTGTaGCTGACACAAATTTTGGGT +
Preference number: 5 (lower is better)
Translates to: RQLQPMVDPKVQYQNHGTRFRVL*LTQILG
Trigger: ACCCAAAATTTGTGTCAGCAACAAAACACGAAATCG...AGTTCCATGATTTTGATACTGTACCTTTGGATCCACCATGGGTTGCAACTGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR CAA 90 bp GTCACATCACAGAAAACCTTATTTATGAGGTCCCATTGCCCTCGCAATAATCACAGGTTTATGGCTTTCTaGAGGCATGACATCTCTTAT +
Preference number: 5 (lower is better)
Translates to: VTSQKTLFMRSHCPRNNHRFMAF*RHDISY
Trigger: ATAAGAGATGTCATGCCTCAAGAAAGCCATAAACCT...GTGATTATTGCGAGGGCAATGGGACCTCATAAATAAGGTTTTCTGTGATGTGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CAA 90 bp AATGTTCTTCATATCACCCCCAAAATAATCACACCAAATGGCCAAAGGGCTTTCACTGAAGCCTCTCCTTaGTCTGGAATGTTCTTCATA +
Preference number: 5 (lower is better)
Translates to: NVLHITPKIITPNGQRAFTEASP*SGMFFI
Trigger: TATGAAGAACATTCCAGACAAAGGAGAGGCTTCAGT...GAAAGCCCTTTGGCCATTTGGTGTGATTATTTTGGGGGTGATATGAAGAACATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636627.1
CDS TCA 90 bp ATGGGCAGCTTTGGACATATTGGCATTATTGAGATTGGCATTTGTTaGGGTGGGAACTTGCTTTCCTATGGAATTATGGTTATGATGGTT +
Preference number: 5 (lower is better)
Translates to: MGSFGHIGIIEIGIC*GGNLLSYGIMVMMV
Trigger: AACCATCATAACCATAATTCCATAGGAAAGCAAGTTCCCACCTCAACAAATGCCAATCTCAATAATGCCAATATGTCCAAAGCTGCCCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000481478.1
ENST00000636448.1
ENST00000636570.1
ENST00000636629.1
ENST00000636633.2
ENST00000636999.2
ENST00000637424.1
CDS GCA 90 bp GCTTCAGAATATTCTGAAAGACTGAGAGGTGAAAGGAATGGAGGCTaGAGGAAAAGCTCAAGCACATTGTTACAATTTTTCCAAAGCATT +
Preference number: 5 (lower is better)
Translates to: ASEYSERLRGERNGG*RKSSSTLLQFFQSI
Trigger: AATGCTTTGGAAAAATTGTAACAATGTGCTTGAGCTTTTCCTGCAGCCTCCATTCCTTTCACCTCTCAGTCTTTCAGAATATTCTGAAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636595.1
CDS GCA 90 bp AAGGTGGAGAGGCCAAAAACAAGCACACATTCTTTAGAAGTGCTTTaGTTTAAGGACTTCACCGTATATATGCTTATATATACTTGCCGC +
Preference number: 5 (lower is better)
Translates to: KVERPKTSTHSLEVL*FKDFTVYMLIYTCR
Trigger: GCGGCAAGTATATATAAGCATATATACGGTGAAGTCCTTAAAGCAAAGCACTTCTAAAGAATGTGTGCTTGTTTTTGGCCTCTCCACCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637081.1
CDS-3UTR CAA 90 bp ACTTACTTACTTACCAGAGGGTGGTTCAAGTCAAACAAACAAAACCAAAGACAGGGTGCTCCGCTTGGTTaGCGTTTCATCAAAATTAAA +
Preference number: 5 (lower is better)
Translates to: TYLLTRGWFKSNKQNQRQGAPLG*RFIKIK
Trigger: TTTAATTTTGATGAAACGCAAACCAAGCGGAGCACC...CTGTCTTTGGTTTTGTTTGTTTGACTTGAACCACCCTCTGGTAAGTAAGTAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR CAA 90 bp TGTTCTTCATATCACCCCCAAAATAATCACACCAAATGGCCAAAGGGCTTTCTTTTCCTATTGATCTGGTaGTTATCTCTCATGGCAACT +
Preference number: 5 (lower is better)
Translates to: CSSYHPQNNHTKWPKGFLFLLIW*LSLMAT
Trigger: AGTTGCCATGAGAGATAACAACCAGATCAATAGGAA...AAGAAAGCCCTTTGGCCATTTGGTGTGATTATTTTGGGGGTGATATGAAGAACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000636627.1
CDS-3UTR CAA 90 bp GAATGTTCTTCATATCACCCCCAAAATAATCACACCAAATGGCCAAAGGGCTTTAACGTCTGGAAGTTATaGTTCCTATTGATCTGGTTG +
Preference number: 5 (lower is better)
Translates to: ECSSYHPQNNHTKWPKGFNVWKL*FLLIWL
Trigger: CAACCAGATCAATAGGAACAATAACTTCCAGACGTT...AAAGCCCTTTGGCCATTTGGTGTGATTATTTTGGGGGTGATATGAAGAACATTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636627.1
CDS-3UTR CAA 90 bp TTGGACCAAAATTGCTACCTATCATCTATCTTTTTGATTGCAGGGAATCCCTGCAGGGCACCATTTCTTTaGAACACATCATCTTCTTCT +
Preference number: 5 (lower is better)
Translates to: LDQNCYLSSIFLIAGNPCRAPFL*NTSSSS
Trigger: AGAAGAAGATGATGTGTTCAAAAGAAATGGTGCCCT...GCAGGGATTCCCTGCAATCAAAAAGATAGATGATAGGTAGCAATTTTGGTCCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR CAA 90 bp ACTTACTTACTTACCAGAGGGTGGTTCAAGTCAAACAAACAAAACCAAAGACAGGCAGCTTTGGACATATaGGCATTATTGAGATTGGCA +
Preference number: 5 (lower is better)
Translates to: TYLLTRGWFKSNKQNQRQAALDI*ALLRLA
Trigger: TGCCAATCTCAATAATGCCAATATGTCCAAAGCTGC...CTGTCTTTGGTTTTGTTTGTTTGACTTGAACCACCCTCTGGTAAGTAAGTAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS TCA 90 bp CAAAGGACTACCCAAAACGTTTTTGCAAAGAATACAAACGCAGGCTaGATTCAATCATTTCTCAGCCAGATCATTCATTCTGGAAGACTA +
Preference number: 5 (lower is better)
Translates to: QRTTQNVFAKNTNAG*IQSFLSQIIHSGRL
Trigger: TAGTCTTCCAGAATGAATGATCTGGCTGAGAAATGATTGAATTCAGCCTGCGTTTGTATTCTTTGCAAAAACGTTTTGGGTAGTCCTTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637081.1
CDS-3UTR CAA 90 bp TGTTCTTCATATCACCCCCAAAATAATCACACCAAATGGCCAAAGGGCTTTCTTTTTGTTGGCAATATCTaGAATCTGTGTCAACCAATC +
Preference number: 5 (lower is better)
Translates to: CSSYHPQNNHTKWPKGFLFVGNI*NLCQPI
Trigger: GATTGGTTGACACAGATTCAAGATATTGCCAACAAA...AAGAAAGCCCTTTGGCCATTTGGTGTGATTATTTTGGGGGTGATATGAAGAACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000636627.1
CDS-3UTR CAA 90 bp AATGTTCTTCATATCACCCCCAAAATAATCACACCAAATGGCCAAAGGGCTTTCAAGCAATCAAACCGGTaGAAAAGAGAGACGAAATAT +
Preference number: 5 (lower is better)
Translates to: NVLHITPKIITPNGQRAFKQSNR*KRETKY
Trigger: ATATTTCGTCTCTCTTTTCAACCGGTTTGATTGCTT...GAAAGCCCTTTGGCCATTTGGTGTGATTATTTTGGGGGTGATATGAAGAACATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000636627.1
CDS-3UTR CAA 90 bp AACAAACTAGTGTATCTAAGTTTACCTGGTTGCGAGTGCATTATTATTCCAGTTCTGTTGGCTATCTGGTaGACTTCTGGTTTGTTGTTC +
Preference number: 5 (lower is better)
Translates to: NKLVYLSLPGCECIIIPVLLAIW*TSGLLF
Trigger: GAACAACAAACCAGAAGTCAACCAGATAGCCAACAG...AACTGGAATAATAATGCACTCGCAACCAGGTAAACTTAGATACACTAGTTTGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CAA 90 bp ATCATGGAACTCTTGCCCAAAGAAAAGACTGCAAATAGTCATCTGGTATATCTTGGAAAGCTCCAAAAGTaGTCATCTTCAACAGGATCT +
Preference number: 5 (lower is better)
Translates to: IMELLPKEKTANSHLVYLGKLQK*SSSTGS
Trigger: AGATCCTGTTGAAGATGACAACTTTTGGAGCTTTCC...AAGATATACCAGATGACTATTTGCAGTCTTTTCTTTGGGCAAGAGTTCCATGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR CAA 90 bp GTGCATTCTAATGAAAACTTCAGCCCTCATTCAATTGCATATAAAAGCCCTCAAGGAAAGCTCCAAAAGTaGTCATCTTCAACAGGATCT +
Preference number: 5 (lower is better)
Translates to: VHSNENFSPHSIAYKSPQGKLQK*SSSTGS
Trigger: AGATCCTGTTGAAGATGACAACTTTTGGAGCTTTCC...TTGAGGGCTTTTATATGCAATTGAATGAGGGCTGAAGTTTTCATTAGAATGCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR CAA 90 bp AACAAACTAGTGTATCTAAGTTTACCTGGTTGCGAGTGCATTATTATTCCAGTTCTTTCCCACCAGTCCTaGTTCTTTCCGTTTCTTGAA +
Preference number: 5 (lower is better)
Translates to: NKLVYLSLPGCECIIIPVLSHQS*FFPFLE
Trigger: TTCAAGAAACGGAAAGAACAAGGACTGGTGGGAAAG...AACTGGAATAATAATGCACTCGCAACCAGGTAAACTTAGATACACTAGTTTGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CAA 90 bp ATGTCAGGAAAGAGTCATTTACAAACCTTGAAGTGTTTTTGCCTGGATCAGAGTTTAAAAATGGATATGTaGGGCCCAGTGACTGATATG +
Preference number: 5 (lower is better)
Translates to: MSGKSHLQTLKCFCLDQSLKMDM*GPVTDM
Trigger: CATATCAGTCACTGGGCCCAACATATCCATTTTTAA...ACTCTGATCCAGGCAAAAACACTTCAAGGTTTGTAAATGACTCTTTCCTGACAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR CAA 90 bp TTGGACCAAAATTGCTACCTATCATCTATCTTTTTGATTGCAGGGAATCCCTGCAGTCATTTACAAACCTaGAAGTGTTTTTGCCTGGAT +
Preference number: 5 (lower is better)
Translates to: LDQNCYLSSIFLIAGNPCSHLQT*KCFCLD
Trigger: ATCCAGGCAAAAACACTTCAAGGTTTGTAAATGACT...GCAGGGATTCCCTGCAATCAAAAAGATAGATGATAGGTAGCAATTTTGGTCCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR CAA 90 bp AACAAACTAGTGTATCTAAGTTTACCTGGTTGCGAGTGCATTATTATTCCAGTTTCAATTGTAACCTTGTaGTCACTGTTGGCTATCTGG +
Preference number: 5 (lower is better)
Translates to: NKLVYLSLPGCECIIIPVSIVTL*SLLAIW
Trigger: CCAGATAGCCAACAGTGACAACAAGGTTACAATTGA...AACTGGAATAATAATGCACTCGCAACCAGGTAAACTTAGATACACTAGTTTGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CAA 90 bp GTGCATTCTAATGAAAACTTCAGCCCTCATTCAATTGCATATAAAAGCCCTCAACAGCGATTTCGTGTTTaGTTGCTGACACAAATTTTG +
Preference number: 5 (lower is better)
Translates to: VHSNENFSPHSIAYKSPQQRFRV*LLTQIL
Trigger: CAAAATTTGTGTCAGCAACAAAACACGAAATCGCTG...TTGAGGGCTTTTATATGCAATTGAATGAGGGCTGAAGTTTTCATTAGAATGCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR CAA 90 bp ATCATGGAACTCTTGCCCAAAGAAAAGACTGCAAATAGTCATCTGGTATATCTTAGGTTTATGGCTTTCTaGAGGCATGACATCTCTTAT +
Preference number: 5 (lower is better)
Translates to: IMELLPKEKTANSHLVYLRFMAF*RHDISY
Trigger: ATAAGAGATGTCATGCCTCAAGAAAGCCATAAACCT...AAGATATACCAGATGACTATTTGCAGTCTTTTCTTTGGGCAAGAGTTCCATGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR CAA 90 bp ATGTCAGGAAAGAGTCATTTACAAACCTTGAAGTGTTTTTGCCTGGATCAGAGTGTCATCTGGTATATCTaGTGGAAAGATGATAGGTTT +
Preference number: 5 (lower is better)
Translates to: MSGKSHLQTLKCFCLDQSVIWYI*WKDDRF
Trigger: AAACCTATCATCTTTCCACAAGATATACCAGATGAC...ACTCTGATCCAGGCAAAAACACTTCAAGGTTTGTAAATGACTCTTTCCTGACAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR CAA 90 bp AACAAACTAGTGTATCTAAGTTTACCTGGTTGCGAGTGCATTATTATTCCAGTTAGGGCACCATTTCTTTaGAACACATCATCTTCTTCT +
Preference number: 5 (lower is better)
Translates to: NKLVYLSLPGCECIIIPVRAPFL*NTSSSS
Trigger: AGAAGAAGATGATGTGTTCAAAAGAAATGGTGCCCT...AACTGGAATAATAATGCACTCGCAACCAGGTAAACTTAGATACACTAGTTTGTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CAA 90 bp AACAAACTAGTGTATCTAAGTTTACCTGGTTGCGAGTGCATTATTATTCCAGTTCGATTTCGTGTTTTGTaGCTGACACAAATTTTGGGT +
Preference number: 5 (lower is better)
Translates to: NKLVYLSLPGCECIIIPVRFRVL*LTQILG
Trigger: ACCCAAAATTTGTGTCAGCAACAAAACACGAAATCG...AACTGGAATAATAATGCACTCGCAACCAGGTAAACTTAGATACACTAGTTTGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CAA 90 bp ATCATGGAACTCTTGCCCAAAGAAAAGACTGCAAATAGTCATCTGGTATATCTTAGTCATTTACAAACCTaGAAGTGTTTTTGCCTGGAT +
Preference number: 5 (lower is better)
Translates to: IMELLPKEKTANSHLVYLSHLQT*KCFCLD
Trigger: ATCCAGGCAAAAACACTTCAAGGTTTGTAAATGACT...AAGATATACCAGATGACTATTTGCAGTCTTTTCTTTGGGCAAGAGTTCCATGAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR CAA 90 bp AACAAACTAGTGTATCTAAGTTTACCTGGTTGCGAGTGCATTATTATTCCAGTTTTTGTTGGCAATATCTaGAATCTGTGTCAACCAATC +
Preference number: 5 (lower is better)
Translates to: NKLVYLSLPGCECIIIPVFVGNI*NLCQPI
Trigger: GATTGGTTGACACAGATTCAAGATATTGCCAACAAA...AACTGGAATAATAATGCACTCGCAACCAGGTAAACTTAGATACACTAGTTTGTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS TCA 72 bp GGGGCAGGGCCTCGGTCACCGTCCTGGCCTGGGTCCTaGAGTCAGCTACCAGACCTGAGCCAGACCAGTCTC +
Preference number: 6 (lower is better)
Translates to: GAGPRSPSWPGS*SQLPDLSQTSL
Trigger: GAGACTGGTCTGGCTCAGGTCTGGTAGCTGACTTCAGGACCCAGGCCAGGACGGTGACCGAGGCCCTGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636595.1
CDS TCA 72 bp GCCCCAAGGTTGGGCATGCTCTCTGGGCTGGGGGACTaGCAGCCAGCTGGCAGATCAAAGAGCTGGCCCGGG +
Preference number: 6 (lower is better)
Translates to: APRLGMLSGLGD*QPAGRSKSWPG
Trigger: CCCGGGCCAGCTCTTTGATCTGCCAGCTGGCTGTCAGTCCCCCAGCCCAGAGAGCATGCCCAACCTTGGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636633.2
CDS TCA 72 bp CGTCCTGGCCTGGGTCCTGAAGTCAGCTACCAGACCTaGGCCAGACCAGTCTCGAAAGCCGTGGCGGCAGCG +
Preference number: 6 (lower is better)
Translates to: RPGLGPEVSYQT*ARPVSKAVAAA
Trigger: CGCTGCCGCCACGGCTTTCGAGACTGGTCTGGCTCAGGTCTGGTAGCTGACTTCAGGACCCAGGCCAGGACG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636595.1
CDS CCA 72 bp CTTCTCAGGGGCAGGGCCTCGGTCACCGTCCTGGCCTaGGTCCTGAAGTCAGCTACCAGACCTGAGCCAGAC +
Preference number: 6 (lower is better)
Translates to: LLRGRASVTVLA*VLKSATRPEPD
Trigger: GTCTGGCTCAGGTCTGGTAGCTGACTTCAGGACCCAGGCCAGGACGGTGACCGAGGCCCTGCCCCTGAGAAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636595.1
CDS CCA 72 bp GGGCTGGCTGGTGGCCCCAAGGTTGGGCATGCTCTCTaGGCTGGGGGACTGACAGCCAGCTGGCAGATCAAA +
Preference number: 6 (lower is better)
Translates to: GLAGGPKVGHAL*AGGLTASWQIK
Trigger: TTTGATCTGCCAGCTGGCTGTCAGTCCCCCAGCCCAGAGAGCATGCCCAACCTTGGGGCCACCAGCCAGCCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636633.2
CDS CCA 72 bp CACAGGGCACCAGGCCCGGGAGATCAGTCTGAATTCTaGGGCCCTAAGACACAGCCAGCAGCCTCCTCCCAG +
Preference number: 6 (lower is better)
Translates to: HRAPGPGDQSEF*GPKTQPAASSQ
Trigger: CTGGGAGGAGGCTGCTGGCTGTGTCTTAGGGCCCCAGAATTCAGACTGATCTCCCGGGCCTGGTGCCCTGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636581.2
CDS CCA 72 bp AGGACTCAGGATGCTCATCCACAGGGCCAGCGGCTGTaGCCGAGCTCCTCAGAAGCAGGCAGTGAGGGGAAG +
Preference number: 6 (lower is better)
Translates to: RTQDAHPQGQRL*PSSSEAGSEGK
Trigger: CTTCCCCTCACTGCCTGCTTCTGAGGAGCTCGGCCACAGCCGCTGGCCCTGTGGATGAGCATCCTGAGTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636633.2
CDS CCA 72 bp GGCTGGTGGCCCCAAGGTTGGGCATGCTCTCTGGGCTaGGGGACTGACAGCCAGCTGGCAGATCAAAGAGCT +
Preference number: 6 (lower is better)
Translates to: GWWPQGWACSLG*GTDSQLADQRA
Trigger: AGCTCTTTGATCTGCCAGCTGGCTGTCAGTCCCCCAGCCCAGAGAGCATGCCCAACCTTGGGGCCACCAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636633.2
CDS TCA 72 bp GTTCCAGCGACGCCAGCGTCGGCTGAGTTTGGATTTTaGGATGGCTTGACCCCACCGCCGACACCCAGAGGG +
Preference number: 6 (lower is better)
Translates to: VPATPASAEFGF*DGLTPPPTPRG
Trigger: CCCTCTGGGTGTCGGCGGTGGGGTCAAGCCATCTCAAAATCCAAACTCAGCCGACGCTGGCGTCGCTGGAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000481478.1
ENST00000636627.1
ENST00000640483.1
CDS CAA 90 bp GACGGGACCTCTTCCTGGCTGCTCTGCCGGCGCAGGCACTCAAAGTaGAAGGAGGATCTCCGGTGGGCTGGGAAAGCAAAGGGCATCACA +
Preference number: 6 (lower is better)
Translates to: DGTSSWLLCRRRHSK*KEDLRWAGKAKGIT
Trigger: TGTGATGCCCTTTGCTTTCCCAGCCCACCGGAGATCCTCCTTCAACTTTGAGTGCCTGCGCCGGCAGAGCAGCCAGGAAGAGGTCCCGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636581.2
CDS GCA 72 bp GCTAAGGAGCAGAGCTGGCTGGCATGCTGCTCTGTCTaGGCCCCAAGAGCCAGAGCTCATCACCTTCTCAGG +
Preference number: 6 (lower is better)
Translates to: AKEQSWLACCSV*APRARAHHLLR
Trigger: CCTGAGAAGGTGATGAGCTCTGGCTCTTGGGGCGCAGACAGAGCAGCATGCCAGCCAGCTCTGCTCCTTAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636595.1
CDS GCA 72 bp CGGGACACCGTCTTTCAGAGTCAGGGTGGCCCCGGATaGTCAGCAACGAGCCCAGGAAGAAGCATGCGGTTT +
Preference number: 6 (lower is better)
Translates to: RDTVFQSQGGPG*SATSPGRSMRF
Trigger: AAACCGCATGCTTCTTCCTGGGCTCGTTGCTGAGCATCCGGGGCCACCCTGACTCTGAAAGACGGTGTCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636581.2
CDS GCA 72 bp CAAGCGCCAGGCTTTGAGACTCCAGCCAAAGAACCCTaGCTGGCAGAGCCTGTTCCCCATCACAGGCAGGCT +
Preference number: 6 (lower is better)
Translates to: QAPGFETPAKEP*LAEPVPHHRQA
Trigger: AGCCTGCCTGTGATGGGGAACAGGCTCTGCCAGGCAGGGTTCTTTGGCTGGAGTCTCAAAGCCTGGCGCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636629.1
CDS GCA 72 bp GGGACTGTTGCTGCATTAGATGCAGAGGCAGGGCCGTaGGATGGGGGAAGATGGGAGACGACGGGACCTCTT +
Preference number: 6 (lower is better)
Translates to: GTVAALDAEAGP*DGGRWETTGPL
Trigger: AAGAGGTCCCGTCGTCTCCCATCTTCCCCCATCGCACGGCCCTGCCTCTGCATCTAATGCAGCAACAGTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636629.1
CDS CCA 72 bp GGAGCAGCTAGGAGACACGCAGAGTTGCCTCACACGTaGCAGCAGGAGAAGGTGCAACACGGATCCGACTGC +
Preference number: 6 (lower is better)
Translates to: GAARRHAELPHT*QQEKVQHGSDC
Trigger: GCAGTCGGATCCGTGTTGCACCTTCTCCTGCTGCCACGTGTGAGGCAACTCTGCGTGTCTCCTAGCTGCTCC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464429.1
CDS CCA 72 bp CCTGGGTCCTGGCTTTGCTCCTTCCTGATTCAGCGGTaGGGAGGAAGGCTTCCCCAAAAGCCAATCCAGGGC +
Preference number: 6 (lower is better)
Translates to: PGSWLCSFLIQR*GGRLPQKPIQG
Trigger: GCCCTGGATTGGCTTTTGGGGAAGCCTTCCTCCCCACCGCTGAATCAGGAAGGAGCAAAGCCAGGACCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636999.2
CDS CCA 72 bp GCAGCCCATAGGGCAACTGATCCGAGTCAGAAGCCCTaGCGCTGCATACTGTGGGGAGCGCACAGCACTTCA +
Preference number: 6 (lower is better)
Translates to: AAHRATDPSQKP*RCILWGAHSTS
Trigger: TGAAGTGCTGTGCGCTCCCCACAGTATGCAGCGCCAGGGCTTCTGACTCGGATCAGTTGCCCTATGGGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636581.2
CDS CCA 72 bp AGTTCTCTGCCGGGACACCGTCTTTCAGAGTCAGGGTaGCCCCGGATGCTCAGCAACGAGCCCAGGAAGAAG +
Preference number: 6 (lower is better)
Translates to: SSLPGHRLSESG*PRMLSNEPRKK
Trigger: CTTCTTCCTGGGCTCGTTGCTGAGCATCCGGGGCCACCCTGACTCTGAAAGACGGTGTCCCGGCAGAGAACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636581.2
CDS CCA 72 bp GGGCCCTGGGGGCCACTGACCACAACTTGCAGAGGCTaGAAGGAGGAATGGTTGCTGGTCCAAAGGCTACAG +
Preference number: 6 (lower is better)
Translates to: GPWGPLTTTCRG*KEEWLLVQRLQ
Trigger: CTGTAGCCTTTGGACCAGCAACCATTCCTCCTTCCAGCCTCTGCAAGTTGTGGTCAGTGGCCCCCAGGGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637589.2
CDS CCA 72 bp ACCATGTGCCAGGCAGCAGGTTACACACTGGGAACGTaGTGCTCCAGAGGGGCACGGTCTCACATTCGCGGA +
Preference number: 6 (lower is better)
Translates to: TMCQAAGYTLGT*CSRGARSHIRG
Trigger: TCCGCGAATGTGAGACCGTGCCCCTCTGGAGCACCACGTTCCCAGTGTGTAACCTGCTGCCTGGCACATGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636633.2
CDS CCA 72 bp TTGCTCCAAGTTGGGGTGACTTATACCCAGCTGGGCTaGCTGGTGGCCCCAAGGTTGGGCATGCTCTCTGGG +
Preference number: 6 (lower is better)
Translates to: LLQVGVTYTQLG*LVAPRLGMLSG
Trigger: CCCAGAGAGCATGCCCAACCTTGGGGCCACCAGCCAGCCCAGCTGGGTATAAGTCACCCCAACTTGGAGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636633.2
CDS CAA 90 bp GCTGGGGAGCAAGCTGTCGGCTGTCACTCGAGTGTGCTCTTCCAGTaGCTCCAAGTTGGGGTGACTTATACCCAGCTGGGCTGGCTGGTG +
Preference number: 6 (lower is better)
Translates to: AGEQAVGCHSSVLFQ*LQVGVTYTQLGWLV
Trigger: CACCAGCCAGCCCAGCTGGGTATAAGTCACCCCAACTTGGAGCAACTGGAAGAGCACACTCGAGTGACAGCCGACAGCTTGCTCCCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636633.2
CDS CAA 90 bp GGGACTGGGCCAGGCCATTCATCTTCAGGATACAAGCGCCAGGCTTaGAGACTCCAGCCAAAGAACCCTGCCTGGCAGAGCCTGTTCCCC +
Preference number: 6 (lower is better)
Translates to: GTGPGHSSSGYKRQA*RLQPKNPAWQSLFP
Trigger: GGGGAACAGGCTCTGCCAGGCAGGGTTCTTTGGCTGGAGTCTCAAAGCCTGGCGCTTGTATCCTGAAGATGAATGGCCTGGCCCAGTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636629.1
CDS GCA 72 bp CTCCGTTCGGGCCAACCCAGCCACTCCTACATTCCGTaGCATTGGCAGTACACTGGCGTCCATTCCCTGAGA +
Preference number: 6 (lower is better)
Translates to: LRSGQPSHSYIP*HWQYTGVHSLR
Trigger: TCTCAGGGAATGGACGCCAGTGTACTGCCAATGGCACGGAATGTAGGAGTGGCTGGGTTGGCCCGAACGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000481085.5
ENST00000636570.1
ENST00000636627.1
ENST00000636938.1
ENST00000637424.1
ENST00000640483.1
CDS GCA 72 bp GAAGCTGTCAGGGAGCAGCTAGGAGACACGCAGAGTTaGCTCACACGTGGCAGCAGGAGAAGGTGCAACACG +
Preference number: 6 (lower is better)
Translates to: EAVREQLGDTQS*LTRGSRRRCNT
Trigger: CGTGTTGCACCTTCTCCTGCTGCCACGTGTGAGGCAACTCTGCGTGTCTCCTAGCTGCTCCCTGACAGCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464429.1
CDS GCA 72 bp CAGCCAGCAGCCTCCTCCCAGAAACCTCCTACCCCTTaGAGGGGCCTCTGTCGAGAGCACACCTATCGTTTA +
Preference number: 6 (lower is better)
Translates to: QPAASSQKPPTP*RGLCREHTYRL
Trigger: TAAACGATAGGTGTGCTCTCGACAGAGGCCCCTGCAAGGGGTAGGAGGTTTCTGGGAGGAGGCTGCTGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636581.2
CDS GCA 72 bp GGCGCTGCATACTGTGGGGAGCGCACAGCACTTCAGTaGAAGAACACAAGTCCTGCCAGAACCCCACGACAC +
Preference number: 6 (lower is better)
Translates to: GAAYCGERTALQ*KNTSPARTPRH
Trigger: GTGTCGTGGGGTTCTGGCAGGACTTGTGTTCTTGCACTGAAGTGCTGTGCGCTCCCCACAGTATGCAGCGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636581.2
CDS GCA 72 bp ATGTGCCAGGCAGCAGGTTACACACTGGGAACGTGGTaGTCCAGAGGGGCACGGTCTCACATTCGCGGATCT +
Preference number: 6 (lower is better)
Translates to: MCQAAGYTLGTW*SRGARSHIRGS
Trigger: AGATCCGCGAATGTGAGACCGTGCCCCTCTGGAGCACCACGTTCCCAGTGTGTAACCTGCTGCCTGGCACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636633.2
CDS CCA 72 bp GCTACCAGACCTGAGCCAGACCAGTCTCGAAAGCCGTaGCGGCAGCGACGCTATAAAAGTTCGCTGGTCACG +
Preference number: 6 (lower is better)
Translates to: ATRPEPDQSRKP*RQRRYKSSLVT
Trigger: CGTGACCAGCGAACTTTTATAGCGTCGCTGCCGCCACGGCTTTCGAGACTGGTCTGGCTCAGGTCTGGTAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636595.1
CDS CCA 72 bp GTTGCTTCTCGCTTCATGCTAAGGAGCAGAGCTGGCTaGCATGCTGCTCTGTCTGCGCCCCAAGAGCCAGAG +
Preference number: 6 (lower is better)
Translates to: VASRFMLRSRAG*HAALSAPQEPE
Trigger: CTCTGGCTCTTGGGGCGCAGACAGAGCAGCATGCCAGCCAGCTCTGCTCCTTAGCATGAAGCGAGAAGCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636595.1
CDS CAA 72 bp TCTTCCTGGCTGCTCTGCCGGCGCAGGCACTCAAAGTaGAAGGAGGATCTCCGGTGGGCTGGGAAAGCAAAG +
Preference number: 6 (lower is better)
Translates to: SSWLLCRRRHSK*KEDLRWAGKAK
Trigger: CTTTGCTTTCCCAGCCCACCGGAGATCCTCCTTCAACTTTGAGTGCCTGCGCCGGCAGAGCAGCCAGGAAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636581.2
CDS CAA 90 bp ATGCCTCCGTTCGGGCCAACCCAGCCACTCCTACATTCCGTGCCATaGGCAGTACACTGGCGTCCATTCCCTGAGAACGCACATGGAGCT +
Preference number: 6 (lower is better)
Translates to: MPPFGPTQPLLHSVP*AVHWRPFPENAHGA
Trigger: AGCTCCATGTGCGTTCTCAGGGAATGGACGCCAGTGTACTGCCAATGGCACGGAATGTAGGAGTGGCTGGGTTGGCCCGAACGGAGGCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636570.1
ENST00000636627.1
ENST00000636938.1
ENST00000637424.1
ENST00000640483.1
CDS CAA 90 bp GCGGCCAGGGCAGCGCTGCTCAGCATGATGAAGACAAGGATGAGGTaGGTGAAGATGTGGTGGTTGATGAGCTTGTGGCAGCCTACGCGG +
Preference number: 6 (lower is better)
Translates to: AARAALLSMMKTRMR*VKMWWLMSLWQPTR
Trigger: CCGCGTAGGCTGCCACAAGCTCATCAACCACCACATCTTCACCAACCTCATCCTTGTCTTCATCATGCTGAGCAGCGCTGCCCTGGCCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000481478.1
ENST00000636138.1
ENST00000636570.1
ENST00000636627.1
ENST00000636938.1
ENST00000637078.1
ENST00000637424.1
ENST00000637714.1
ENST00000640483.1
CDS GCA 72 bp ACAGCACCTGCACACGTGGAGAATCTGCAAGGAGCCTaGCAGCAGAGATCTACAGCCACCTGGGCTCTTCGA +
Preference number: 6 (lower is better)
Translates to: TAPAHVENLQGA*QQRSTATWALR
Trigger: TCGAAGAGCCCAGGTGGCTGTAGATCTCTGCTGGCAGGCTCCTTGCAGATTCTCCACGTGTGCAGGTGCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636595.1
CDS CCA 72 bp GGGGATAAGCCTCTCAGAGGAGCCGTGAGGATGATGTaGGAGGAAGCAGGTAAAGCACTCAGCCACCTGGCT +
Preference number: 6 (lower is better)
Translates to: GDKPLRGAVRMM*EEAGKALSHLA
Trigger: AGCCAGGTGGCTGAGTGCTTTACCTGCTTCCTCCCACATCATCCTCACGGCTCCTCTGAGAGGCTTATCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637589.2
CDS CCA 72 bp GCCAGGCAACATCAAACCCCAGTGATGATGCTGGGGTaGTCCAGACACACAGGGAAGCGTGAGACAGGCTCA +
Preference number: 6 (lower is better)
Translates to: ARQHQTPVMMLG*SRHTGKRETGS
Trigger: TGAGCCTGTCTCACGCTTCCCTGTGTGTCTGGACCACCCCAGCATCATCACTGGGGTTTGATGTTGCCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636633.2
CDS CAA 72 bp GGTGGGGGTGCAGAGGTGCTCATAGTTTGGGCAGCCTaGGCCTGTCTAGCAGCATCGATTGCAGCTTGCCAA +
Preference number: 6 (lower is better)
Translates to: GGGAEVLIVWAA*ACLAASIAACQ
Trigger: TTGGCAAGCTGCAATCGATGCTGCTAGACAGGCCAAGGCTGCCCAAACTATGAGCACCTCTGCACCCCCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636480.1
ENST00000636570.1
ENST00000636938.1
ENST00000637424.1
ENST00000640483.1
CDS CAA 72 bp TTCGGGCCAACCCAGCCACTCCTACATTCCGTGCCATaGGCAGTACACTGGCGTCCATTCCCTGAGAACGCA +
Preference number: 6 (lower is better)
Translates to: FGPTQPLLHSVP*AVHWRPFPENA
Trigger: TGCGTTCTCAGGGAATGGACGCCAGTGTACTGCCAATGGCACGGAATGTAGGAGTGGCTGGGTTGGCCCGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000481085.5
ENST00000636570.1
ENST00000636627.1
ENST00000636938.1
ENST00000637424.1
ENST00000640483.1
CDS CAA 72 bp AGAAGCTGTCAGGGAGCAGCTAGGAGACACGCAGAGTaGCCTCACACGTGGCAGCAGGAGAAGGTGCAACAC +
Preference number: 6 (lower is better)
Translates to: RSCQGAARRHAE*PHTWQQEKVQH
Trigger: GTGTTGCACCTTCTCCTGCTGCCACGTGTGAGGCAACTCTGCGTGTCTCCTAGCTGCTCCCTGACAGCTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464429.1
CDS CAA 90 bp GATCCTACAGGTGGGGGTGCAGAGGTGCTCATAGTTTGGGCAGCCTaGGCCTGTCTAGCAGCATCGATTGCAGCTTGCCAAGACAGGACA +
Preference number: 6 (lower is better)
Translates to: DPTGGGAEVLIVWAA*ACLAASIAACQDRT
Trigger: TGTCCTGTCTTGGCAAGCTGCAATCGATGCTGCTAGACAGGCCAAGGCTGCCCAAACTATGAGCACCTCTGCACCCCCACCTGTAGGATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636480.1
ENST00000636570.1
ENST00000636938.1
ENST00000637424.1
ENST00000640483.1
CDS TCA 72 bp TTCCGTGCCATTGGCAGTACACTGGCGTCCATTCCCTaGGAACGCACATGGAGCTGGGTCCTCTTCAGCTAC +
Preference number: 6 (lower is better)
Translates to: FRAIGSTLASIP*ERTWSWVLFSY
Trigger: GTAGCTGAAGAGGACCCAGCTCCATGTGCGTTCTCAGGGAATGGACGCCAGTGTACTGCCAATGGCACGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636570.1
ENST00000636627.1
ENST00000636938.1
ENST00000637424.1
ENST00000640483.1
CDS TCA 72 bp GTTCCAGCGACGCCAGCGTCGGCTGAGTTTGGATTTTaGGATGGCTTGACAGAGACTTCCACAGCAGCCTCG +
Preference number: 6 (lower is better)
Translates to: VPATPASAEFGF*DGLTETSTAAS
Trigger: CGAGGCTGCTGTGGAAGTCTCTGTCAAGCCATCTCAAAATCCAAACTCAGCCGACGCTGGCGTCGCTGGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000350061.11
ENST00000422281.7
ENST00000481085.5
ENST00000636570.1
ENST00000636938.1
ENST00000637424.1
CDS TCA 72 bp CGGTGGGCTGGGAAAGCAAAGGGCATCACACAGCTGTaGAGCAAGTTCTCTGCCGGGACACCGTCTTTCAGA +
Preference number: 6 (lower is better)
Translates to: RWAGKAKGITQL*SKFSAGTPSFR
Trigger: TCTGAAAGACGGTGTCCCGGCAGAGAACTTGCTTCACAGCTGTGTGATGCCCTTTGCTTTCCCAGCCCACCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636581.2
CDS GCA 72 bp ACGCAGAGTTGCCTCACACGTGGCAGCAGGAGAAGGTaGAACACGGATCCGACTGCTTACCCACTAAGGACA +
Preference number: 6 (lower is better)
Translates to: TQSCLTRGSRRR*NTDPTAYPLRT
Trigger: TGTCCTTAGTGGGTAAGCAGTCGGATCCGTGTTGCACCTTCTCCTGCTGCCACGTGTGAGGCAACTCTGCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464429.1
CDS GCA 72 bp GGAGCGCACAGCACTTCAGTGCAAGAACACAAGTCCTaGCAGAACCCCACGACACTTCCCACTGTCACCTTC +
Preference number: 6 (lower is better)
Translates to: GAHSTSVQEHKS*QNPTTLPTVTF
Trigger: GAAGGTGACAGTGGGAAGTGTCGTGGGGTTCTGGCAGGACTTGTGTTCTTGCACTGAAGTGCTGTGCGCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636581.2
CDS CCA 72 bp GATCCTACAGGTGGGGGTGCAGAGGTGCTCATAGTTTaGGCAGCCTTGGCCTGTCTAGCAGCATCGATTGCA +
Preference number: 6 (lower is better)
Translates to: DPTGGGAEVLIV*AALACLAASIA
Trigger: TGCAATCGATGCTGCTAGACAGGCCAAGGCTGCCCAAACTATGAGCACCTCTGCACCCCCACCTGTAGGATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636480.1
ENST00000636570.1
ENST00000636938.1
ENST00000637424.1
ENST00000640483.1
CDS CCA 72 bp ATGAGGTTGGTGAAGATGTGGTGGTTGATGAGCTTGTaGCAGCCTACGCGGATCCTGGCACATCGCAAGGCG +
Preference number: 6 (lower is better)
Translates to: MRLVKMWWLMSL*QPTRILAHRKA
Trigger: CGCCTTGCGATGTGCCAGGATCCGCGTAGGCTGCCACAAGCTCATCAACCACCACATCTTCACCAACCTCAT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636138.1
CDS CCA 72 bp GAAAGCCGTGGCGGCAGCGACGCTATAAAAGTTCGCTaGTCACGAAACACACCAAAGGCTCATCACGTGCCC +
Preference number: 6 (lower is better)
Translates to: ESRGGSDAIKVR*SRNTPKAHHVP
Trigger: GGGCACGTGATGAGCCTTTGGTGTGTTTCGTGACCAGCGAACTTTTATAGCGTCGCTGCCGCCACGGCTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636595.1
CDS CCA 72 bp ACTGATCCGAGTCAGAAGCCCTGGCGCTGCATACTGTaGGGAGCGCACAGCACTTCAGTGCAAGAACACAAG +
Preference number: 6 (lower is better)
Translates to: TDPSQKPWRCIL*GAHSTSVQEHK
Trigger: CTTGTGTTCTTGCACTGAAGTGCTGTGCGCTCCCCACAGTATGCAGCGCCAGGGCTTCTGACTCGGATCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636581.2
CDS CAA 72 bp ACGCACTGGACCACGTGCTTAAGTCCTTTTGCTCTGTaGATGGCCCTGAGGGGACGCAGGACCCTTAAGACC +
Preference number: 6 (lower is better)
Translates to: THWTTCLSPFAL*MALRGRRTLKT
Trigger: GGTCTTAAGGGTCCTGCGTCCCCTCAGGGCCATCAACAGAGCAAAAGGACTTAAGCACGTGGTCCAGTGCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000481478.1
ENST00000636138.1
ENST00000636570.1
ENST00000636627.1
ENST00000636938.1
ENST00000637424.1
ENST00000637714.1
ENST00000640483.1
ENST00000645528.2
CDS CAA 72 bp CCTCACATGCTGGGGTGGGAGGTAGTAGGCGTCTCCTaGGAGATCTCCGTGAATCATAGCAAACGGGCGAGT +
Preference number: 6 (lower is better)
Translates to: PHMLGWEVVGVS*EISVNHSKRAS
Trigger: ACTCGCCCGTTTGCTATGATTCACGGAGATCTCCAAGGAGACGCCTACTACCTCCCACCCCAGCATGTGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637844.1
CDS CAA 72 bp CAAGCTGTCGGCTGTCACTCGAGTGTGCTCTTCCAGTaGCTCCAAGTTGGGGTGACTTATACCCAGCTGGGC +
Preference number: 6 (lower is better)
Translates to: QAVGCHSSVLFQ*LQVGVTYTQLG
Trigger: GCCCAGCTGGGTATAAGTCACCCCAACTTGGAGCAACTGGAAGAGCACACTCGAGTGACAGCCGACAGCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636633.2
CDS CAA 72 bp CCAGGCCATTCATCTTCAGGATACAAGCGCCAGGCTTaGAGACTCCAGCCAAAGAACCCTGCCTGGCAGAGC +
Preference number: 6 (lower is better)
Translates to: PGHSSSGYKRQA*RLQPKNPAWQS
Trigger: GCTCTGCCAGGCAGGGTTCTTTGGCTGGAGTCTCAAAGCCTGGCGCTTGTATCCTGAAGATGAATGGCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636629.1
CDS CAA 90 bp GACACTAGTCGAAGTGGTCGCAACACTCGAAAGGCACGGAGGGCTTaGACATCAAAGCCTCCAGATTTGCCGCTTGAGTGGTTCCCGCCT +
Preference number: 6 (lower is better)
Translates to: DTSRSGRNTRKARRA*TSKPPDLPLEWFPP
Trigger: AGGCGGGAACCACTCAAGCGGCAAATCTGGAGGCTTTGATGTCAAAGCCCTCCGTGCCTTTCGAGTGTTGCGACCACTTCGACTAGTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636570.1
ENST00000636938.1
ENST00000637424.1
ENST00000640483.1
CDS TCA 72 bp GATCTGCCAGGCCAAGAGCTTATGCCCCTGTCTCAGTaGCAGTCTTCAGTAGGCTCGCCTACAAGAGCCCTA +
Preference number: 6 (lower is better)
Translates to: DLPGQELMPLSQ*QSSVGSPTRAL
Trigger: TAGGGCTCTTGTAGGCGAGCCTACTGAAGACTGTCACTGAGACAGGGGCATAAGCTCTTGGCCTGGCAGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636999.2
CDS GCA 72 bp TGGTCCTTCACCAGAAAGAGGAAGTCTGGTGCCTCTTaGATAGTTTGCCTCGTTCGCGTGGTCCGCTTGCTG +
Preference number: 6 (lower is better)
Translates to: WSFTRKRKSGAS*IVCLVRVVRLL
Trigger: CAGCAAGCGGACCACGCGAACGAGGCAAACTATGCAAGAGGCACCAGACTTCCTCTTTCTGGTGAAGGACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636480.1
ENST00000636570.1
ENST00000636938.1
ENST00000640483.1
CDS GCA 72 bp GCAGCCTTGGCCTGTCTAGCAGCATCGATTGCAGCTTaGCAAGACAGGACAGTTTGCTTGGAGCTATTCGGC +
Preference number: 6 (lower is better)
Translates to: AALACLAASIAA*QDRTVCLELFG
Trigger: GCCGAATAGCTCCAAGCAAACTGTCCTGTCTTGGCAAGCTGCAATCGATGCTGCTAGACAGGCCAAGGCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636480.1
ENST00000636570.1
ENST00000636938.1
ENST00000637424.1
ENST00000640483.1
CDS GCA 72 bp ACGTTTTCTTTGGGAGAGAGATCCTACAGGTGGGGGTaGAGAGGTGCTCATAGTTTGGGCAGCCTTGGCCTG +
Preference number: 6 (lower is better)
Translates to: TFSLGERSYRWG*RGAHSLGSLGL
Trigger: CAGGCCAAGGCTGCCCAAACTATGAGCACCTCTGCACCCCCACCTGTAGGATCTCTCTCCCAAAGAAAACGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636480.1
ENST00000636570.1
ENST00000636938.1
ENST00000637424.1
ENST00000640483.1
CDS CAA 72 bp GGCAGCCTTGGCCTGTCTAGCAGCATCGATTGCAGCTaGCCAAGACAGGACAGTTTGCTTGGAGCTATTCGG +
Preference number: 6 (lower is better)
Translates to: GSLGLSSSIDCS*PRQDSLLGAIR
Trigger: CCGAATAGCTCCAAGCAAACTGTCCTGTCTTGGCAAGCTGCAATCGATGCTGCTAGACAGGCCAAGGCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636480.1
ENST00000636570.1
ENST00000636938.1
ENST00000637424.1
ENST00000640483.1
CDS CAA 72 bp CGAAGTGGTCGCAACACTCGAAAGGCACGGAGGGCTTaGACATCAAAGCCTCCAGATTTGCCGCTTGAGTGG +
Preference number: 6 (lower is better)
Translates to: RSGRNTRKARRA*TSKPPDLPLEW
Trigger: CCACTCAAGCGGCAAATCTGGAGGCTTTGATGTCAAAGCCCTCCGTGCCTTTCGAGTGTTGCGACCACTTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636570.1
ENST00000636938.1
ENST00000637424.1
ENST00000640483.1
CDS CAA 90 bp AAAATCTGGCCTCACATGCTGGGGTGGGAGGTAGTAGGCGTCTCCTaGGAGATCTCCGTGAATCATAGCAAACGGGCGAGTCATCGTCCT +
Preference number: 6 (lower is better)
Translates to: KIWPHMLGWEVVGVS*EISVNHSKRASHRP
Trigger: AGGACGATGACTCGCCCGTTTGCTATGATTCACGGAGATCTCCAAGGAGACGCCTACTACCTCCCACCCCAGCATGTGAGGCCAGATTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637844.1
CDS TCA 72 bp CTGACGGTGGCATCCATTGACATGGATCCTGAAGCTTaGTGGGCTGGGGGACATGGAGAACCATCATCCTTC +
Preference number: 6 (lower is better)
Translates to: LTVASIDMDPEA*WAGGHGEPSSF
Trigger: GAAGGATGATGGTTCTCCATGTCCCCCAGCCCATCAAGCTTCAGGATCCATGTCAATGGATGCCACCGTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637589.2
CDS GCA 72 bp GAGAAGTTGGTCCTTCACCAGAAAGAGGAAGTCTGGTaGCTCTTGCATAGTTTGCCTCGTTCGCGTGGTCCG +
Preference number: 6 (lower is better)
Translates to: EKLVLHQKEEVW*LLHSLPRSRGP
Trigger: CGGACCACGCGAACGAGGCAAACTATGCAAGAGGCACCAGACTTCCTCTTTCTGGTGAAGGACCAACTTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636480.1
ENST00000636570.1
ENST00000636938.1
ENST00000640483.1
CDS GCA 72 bp AGTTTGGGCAGCCTTGGCCTGTCTAGCAGCATCGATTaGAGCTTGCCAAGACAGGACAGTTTGCTTGGAGCT +
Preference number: 6 (lower is better)
Translates to: SLGSLGLSSSID*SLPRQDSLLGA
Trigger: AGCTCCAAGCAAACTGTCCTGTCTTGGCAAGCTGCAATCGATGCTGCTAGACAGGCCAAGGCTGCCCAAACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636480.1
ENST00000636570.1
ENST00000636938.1
ENST00000637424.1
ENST00000640483.1
CDS GCA 72 bp ACGTGGCAGCAGGAGAAGGTGCAACACGGATCCGACTaGTTACCCACTAAGGACACCAAGAACCAGGTTAAG +
Preference number: 6 (lower is better)
Translates to: TWQQEKVQHGSD*LPTKDTKNQVK
Trigger: CTTAACCTGGTTCTTGGTGTCCTTAGTGGGTAAGCAGTCGGATCCGTGTTGCACCTTCTCCTGCTGCCACGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464429.1
CDS GCA 72 bp TCCAAGGAACACTGCCTGGTTACTAGTGCTAGGATCTaGCAGGCCAAGAGCTTATGCCCCTGTCTCAGTGAC +
Preference number: 6 (lower is better)
Translates to: SKEHCLVTSARI*QAKSLCPCLSD
Trigger: GTCACTGAGACAGGGGCATAAGCTCTTGGCCTGGCAGATCCTAGCACTAGTAACCAGGCAGTGTTCCTTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636999.2
CDS GCA 72 bp GCTACGGGTAACCCCTTCAGCAACAAAAGCTCACGTTaGTTCTCGCTTCATGCTAAGGAGCAGAGCTGGCTG +
Preference number: 6 (lower is better)
Translates to: ATGNPFSNKSSR*FSLHAKEQSWL
Trigger: CAGCCAGCTCTGCTCCTTAGCATGAAGCGAGAAGCAACGTGAGCTTTTGTTGCTGAAGGGGTTACCCGTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636595.1
CDS GCA 72 bp TCCTTAATCCCGCGCTGTAGCAGTGGAGATAAGAGATaGATGTCTCTAGTCGGGACTGGGCCAGGCCATTCA +
Preference number: 6 (lower is better)
Translates to: SLIPRCSSGDKR*MSLVGTGPGHS
Trigger: TGAATGGCCTGGCCCAGTCCCGACTAGAGACATGCATCTCTTATCTCCACTGCTACAGCGCGGGATTAAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636629.1
CDS CCA 72 bp ACATCAGGTGATAGGAAAGGCGAAGAGTGTTTCGGGTaGAGGGAGCACCATGTGCATAGGAGCAGGGTGACA +
Preference number: 6 (lower is better)
Translates to: TSGDRKGEECFG*REHHVHRSRVT
Trigger: TGTCACCCTGCTCCTATGCACATGGTGCTCCCTCCACCCGAAACACTCTTCGCCTTTCCTATCACCTGATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636633.2
CDS CCA 72 bp GTTATGACACACCGAATTTCCTGCGATTTCCTGAGCTaGGGAGCAAGCTGTCGGCTGTCACTCGAGTGTGCT +
Preference number: 6 (lower is better)
Translates to: VMTHRISCDFLS*GASCRLSLECA
Trigger: AGCACACTCGAGTGACAGCCGACAGCTTGCTCCCCAGCTCAGGAAATCGCAGGAAATTCGGTGTGTCATAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636633.2
CDS CAA 72 bp TTGGTCCTTCACCAGAAAGAGGAAGTCTGGTGCCTCTaGCATAGTTTGCCTCGTTCGCGTGGTCCGCTTGCT +
Preference number: 6 (lower is better)
Translates to: LVLHQKEEVWCL*HSLPRSRGPLA
Trigger: AGCAAGCGGACCACGCGAACGAGGCAAACTATGCAAGAGGCACCAGACTTCCTCTTTCTGGTGAAGGACCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636480.1
ENST00000636570.1
ENST00000636938.1
ENST00000640483.1
CDS CAA 90 bp ACACCGAATTTCCTGCTGGAGGAAACAGCGGTTTCTCAGTATCACTaGCAGGTGGAATTGAAGGCCTTTGGACATGCAGGGGACGGTGGG +
Preference number: 6 (lower is better)
Translates to: TPNFLLEETAVSQYH*QVELKAFGHAGDGG
Trigger: CCCACCGTCCCCTGCATGTCCAAAGGCCTTCAATTCCACCTGCAAGTGATACTGAGAAACCGCTGTTTCCTCCAGCAGGAAATTCGGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000481478.1
ENST00000636570.1
ENST00000636629.1
ENST00000636999.2
ENST00000637424.1
CDS TCA 72 bp CCAAGGATGCTAGAATGCTGGTGTGGTGGCACTGGGTaGACAGATCCTGCACCTTTAAAACACCAGCTGGAG +
Preference number: 6 (lower is better)
Translates to: PRMLECWCGGTG*TDPAPLKHQLE
Trigger: CTCCAGCTGGTGTTTTAAAGGTGCAGGATCTGTTCACCCAGTGCCACCACACCAGCATTCTAGCATCCTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636595.1
CDS TCA 72 bp TGTCACCTTCCAGATACCCTAAGTGTCCCCAGCAGCTaGCATATCTTGCTGGGGCTCCTGTGTTTACACCTG +
Preference number: 6 (lower is better)
Translates to: CHLPDTLSVPSS*HILLGLLCLHL
Trigger: CAGGTGTAAACACAGGAGCCCCAGCAAGATATGTCAGCTGCTGGGGACACTTAGGGTATCTGGAAGGTGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636581.2
CDS TCA 72 bp GTGAGGTTAGGACCAAATGTGATGGAGATAAGTCCATaGGTGCTGCCAAACCAGGAACTGAGCGGGGTGTGG +
Preference number: 6 (lower is better)
Translates to: VRLGPNVMEISP*VLPNQELSGVW
Trigger: CCACACCCCGCTCAGTTCCTGGTTTGGCAGCACTCATGGACTTATCTCCATCACATTTGGTCCTAACCTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637081.1
CDS TCA 72 bp TCGGGTGGAGGGAGCACCATGTGCATAGGAGCAGGGTaGCAGCATAGATACCGAGGGAATGAAAATAACGTG +
Preference number: 6 (lower is better)
Translates to: SGGGSTMCIGAG*QHRYRGNENNV
Trigger: CACGTTATTTTCATTCCCTCGGTATCTATGCTGTCACCCTGCTCCTATGCACATGGTGCTCCCTCCACCCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636633.2
CDS GCA 72 bp CACGATATAGCACGCCGGATTTCTGGCCCAATGTCATaGAGTGTCCTTAATCCCGCCTGTAGGGCAATTGTG +
Preference number: 6 (lower is better)
Translates to: HDIARRISGPMS*SVLNPACRAIV
Trigger: CACAATTGCCCTACAGGCGGGATTAAGGACACTGCATGACATTGGGCCAGAAATCCGGCGTGCTATATCGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000481478.1
ENST00000636448.1
ENST00000636570.1
ENST00000636633.2
ENST00000637424.1
ENST00000637589.2
CDS GCA 72 bp AACCTCCTTTGCAAAACCCCCACTTCCAAGGAACACTaGCTGGTTACTAGTGCTAGGATCTGCCAGGCCAAG +
Preference number: 6 (lower is better)
Translates to: NLLCKTPTSKEH*LVTSARICQAK
Trigger: CTTGGCCTGGCAGATCCTAGCACTAGTAACCAGGCAGTGTTCCTTGGAAGTGGGGGTTTTGCAAAGGAGGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636999.2
CDS GCA 72 bp TGGACGTGTAAATGTGCCCCATGGCTCTCCCACGGCTaGTTGCTACCAAATCTTCAGTGTGCTGTGTCTCTT +
Preference number: 6 (lower is better)
Translates to: WTCKCAPWLSHG*LLPNLQCAVSL
Trigger: AAGAGACACAGCACACTGAAGATTTGGTAGCAAGCAGCCGTGGGAGAGCCATGGGGCACATTTACACGTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637589.2
CDS CCA 72 bp GCTGAGAAGTTGGTCCTTCACCAGAAAGAGGAAGTCTaGTGCCTCTTGCATAGTTTGCCTCGTTCGCGTGGT +
Preference number: 6 (lower is better)
Translates to: AEKLVLHQKEEV*CLLHSLPRSRG
Trigger: ACCACGCGAACGAGGCAAACTATGCAAGAGGCACCAGACTTCCTCTTTCTGGTGAAGGACCAACTTCTCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636480.1
ENST00000636570.1
ENST00000636938.1
ENST00000640483.1
CDS CCA 72 bp TTGCTGACGTTTTCTTTGGGAGAGAGATCCTACAGGTaGGGGTGCAGAGGTGCTCATAGTTTGGGCAGCCTT +
Preference number: 6 (lower is better)
Translates to: LLTFSLGERSYR*GCRGAHSLGSL
Trigger: AAGGCTGCCCAAACTATGAGCACCTCTGCACCCCCACCTGTAGGATCTCTCTCCCAAAGAAAACGTCAGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636480.1
ENST00000636570.1
ENST00000636938.1
ENST00000637424.1
ENST00000640483.1
CDS CCA 72 bp ATGAGGTTGGTGAAGATGTGGTGGTTGATGAGCTTGTaGCAGCCTACGCGGATCGGGTTGGTCTTGCTAAGA +
Preference number: 6 (lower is better)
Translates to: MRLVKMWWLMSL*QPTRIGLVLLR
Trigger: TCTTAGCAAGACCAACCCGATCCGCGTAGGCTGCCACAAGCTCATCAACCACCACATCTTCACCAACCTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000481478.1
ENST00000636570.1
ENST00000636627.1
ENST00000636938.1
ENST00000637078.1
ENST00000637424.1
ENST00000637714.1
ENST00000640483.1
CDS CCA 72 bp TGTAGATTGGGCCGATGTTCTCTCCATTCGAGTCGATaGCTTTATACAGCAACGCAGGCCAGCCCTCAAACG +
Preference number: 6 (lower is better)
Translates to: CRLGRCSLHSSR*LYTATQASPQT
Trigger: CGTTTGAGGGCTGGCCTGCGTTGCTGTATAAAGCCATCGACTCGAATGGAGAGAACATCGGCCCAATCTACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000481478.1
ENST00000636570.1
ENST00000636627.1
ENST00000636723.1
ENST00000636938.1
ENST00000637424.1
ENST00000640483.1
ENST00000645528.2
CDS CCA 72 bp GAATTGAAGGCCTTTGGACATGCAGGGGACGGTGGGTaGTATTGGTCTGCTGAAGGGAATCTCTCCTATCAC +
Preference number: 6 (lower is better)
Translates to: ELKAFGHAGDGG*YWSAEGNLSYH
Trigger: GTGATAGGAGAGATTCCCTTCAGCAGACCAATACCACCCACCGTCCCCTGCATGTCCAAAGGCCTTCAATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000481478.1
ENST00000636570.1
ENST00000636629.1
ENST00000636999.2
ENST00000637424.1
CDS CCA 72 bp TCCTTTGCAAAACCCCCACTTCCAAGGAACACTGCCTaGTTACTAGTGCTAGGATCTGCCAGGCCAAGAGCT +
Preference number: 6 (lower is better)
Translates to: SFAKPPLPRNTA*LLVLGSARPRA
Trigger: AGCTCTTGGCCTGGCAGATCCTAGCACTAGTAACCAGGCAGTGTTCCTTGGAAGTGGGGGTTTTGCAAAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636999.2
CDS CAA 72 bp GCAGCGCTGCTCAGCATGATGAAGACAAGGATGAGGTaGGTGAAGATGTGGTGGTTGATGAGCTTGTGGCAG +
Preference number: 6 (lower is better)
Translates to: AALLSMMKTRMR*VKMWWLMSLWQ
Trigger: CTGCCACAAGCTCATCAACCACCACATCTTCACCAACCTCATCCTTGTCTTCATCATGCTGAGCAGCGCTGC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000481478.1
ENST00000636138.1
ENST00000636570.1
ENST00000636627.1
ENST00000636938.1
ENST00000637078.1
ENST00000637424.1
ENST00000637714.1
ENST00000640483.1
CDS CAA 72 bp AGCCACCTGGCTCAGGCTGTCTTAAGTGCTGGGCACTaGATGTTGATCATGAGCCCTCAGAGTCACCCTTAT +
Preference number: 6 (lower is better)
Translates to: SHLAQAVLSAGH*MLIMSPQSHPY
Trigger: ATAAGGGTGACTCTGAGGGCTCATGATCAACATCAAGTGCCCAGCACTTAAGACAGCCTGAGCCAGGTGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637589.2
CDS CAA 90 bp GGCCTGTCTAGCAGCATCGATTGCAGCTTGCCAAGACAGGACAGTTaGCTTGGAGCTATTCGGCTGAGAAGTTGGTCCTTCACCAGAAAG +
Preference number: 6 (lower is better)
Translates to: GLSSSIDCSLPRQDS*LGAIRLRSWSFTRK
Trigger: CTTTCTGGTGAAGGACCAACTTCTCAGCCGAATAGCTCCAAGCAAACTGTCCTGTCTTGGCAAGCTGCAATCGATGCTGCTAGACAGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636480.1
ENST00000636570.1
ENST00000636938.1
ENST00000637424.1
ENST00000640483.1
CDS CAA 90 bp CATAGTTTGGGCAGCCTTGGCCTGTCTAGCAGCATCGATTGCAGCTaGCCAAGACAGGACAGTTTGCTTGGAGCTATTCGGCTGAGAAGT +
Preference number: 6 (lower is better)
Translates to: HSLGSLGLSSSIDCS*PRQDSLLGAIRLRS
Trigger: ACTTCTCAGCCGAATAGCTCCAAGCAAACTGTCCTGTCTTGGCAAGCTGCAATCGATGCTGCTAGACAGGCCAAGGCTGCCCAAACTATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636480.1
ENST00000636570.1
ENST00000636938.1
ENST00000637424.1
ENST00000640483.1
CDS CAA 90 bp CGAGAGCACACCTATCGTTTACAAGGCATTTCTATGGCTCCTATCTaGACCGCTGCTTTTCTCGGATCACAGGGCCTCCTTTCTCAGCCC +
Preference number: 6 (lower is better)
Translates to: REHTYRLQGISMAPI*TAAFLGSQGLLSQP
Trigger: GGGCTGAGAAAGGAGGCCCTGTGATCCGAGAAAAGCAGCGGTCAAGATAGGAGCCATAGAAATGCCTTGTAAACGATAGGTGTGCTCTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636581.2
CDS CAA 90 bp TCTCCCACGGCTGCTTGCTACCAAATCTTCAGTGTGCTGTGTCTCTaGGGGGTAAAGCTTGTGACCACTTTAGTACTCCGTCCCATGTGT +
Preference number: 6 (lower is better)
Translates to: SPTAACYQIFSVLCL*GVKLVTTLVLRPMC
Trigger: ACACATGGGACGGAGTACTAAAGTGGTCACAAGCTTTACCCCCAAGAGACACAGCACACTGAAGATTTGGTAGCAAGCAGCCGTGGGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637589.2
CDS CCA 72 bp CAGGACAGTTTGCTTGGAGCTATTCGGCTGAGAAGTTaGTCCTTCACCAGAAAGAGGAAGTCTGGTGCCTCT +
Preference number: 6 (lower is better)
Translates to: QDSLLGAIRLRS*SFTRKRKSGAS
Trigger: AGAGGCACCAGACTTCCTCTTTCTGGTGAAGGACCAACTTCTCAGCCGAATAGCTCCAAGCAAACTGTCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636480.1
ENST00000636570.1
ENST00000636938.1
ENST00000637424.1
ENST00000640483.1
CDS CCA 72 bp CATCGATTGCAGCTTGCCAAGACAGGACAGTTTGCTTaGAGCTATTCGGCTGAGAAGTTGGTCCTTCACCAG +
Preference number: 6 (lower is better)
Translates to: HRLQLAKTGQFA*SYSAEKLVLHQ
Trigger: CTGGTGAAGGACCAACTTCTCAGCCGAATAGCTCCAAGCAAACTGTCCTGTCTTGGCAAGCTGCAATCGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636480.1
ENST00000636570.1
ENST00000636938.1
ENST00000637424.1
ENST00000640483.1
CDS CCA 72 bp TGTAGATTGGGCCGATGTTCTCTCCATTCGAGTCGATaGCTTTATACAGCAACCCCAAGGCTGCTGGACACA +
Preference number: 6 (lower is better)
Translates to: CRLGRCSLHSSR*LYTATPRLLDT
Trigger: TGTGTCCAGCAGCCTTGGGGTTGCTGTATAAAGCCATCGACTCGAATGGAGAGAACATCGGCCCAATCTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638120.1
CDS CCA 72 bp CATGGTAAACCACTTTGGACGTGTAAATGTGCCCCATaGCTCTCCCACGGCTGCTTGCTACCAAATCTTCAG +
Preference number: 6 (lower is better)
Translates to: HGKPLWTCKCAP*LSHGCLLPNLQ
Trigger: CTGAAGATTTGGTAGCAAGCAGCCGTGGGAGAGCCATGGGGCACATTTACACGTCCAAAGTGGTTTACCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637589.2
CDS CAA 72 bp AGCAGCATCGATTGCAGCTTGCCAAGACAGGACAGTTaGCTTGGAGCTATTCGGCTGAGAAGTTGGTCCTTC +
Preference number: 6 (lower is better)
Translates to: SSIDCSLPRQDS*LGAIRLRSWSF
Trigger: GAAGGACCAACTTCTCAGCCGAATAGCTCCAAGCAAACTGTCCTGTCTTGGCAAGCTGCAATCGATGCTGCT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636480.1
ENST00000636570.1
ENST00000636938.1
ENST00000637424.1
ENST00000640483.1
CDS CAA 72 bp TTCCTGCTGGAGGAAACAGCGGTTTCTCAGTATCACTaGCAGGTGGAATTGAAGGCCTTTGGACATGCAGGG +
Preference number: 6 (lower is better)
Translates to: FLLEETAVSQYH*QVELKAFGHAG
Trigger: CCCTGCATGTCCAAAGGCCTTCAATTCCACCTGCAAGTGATACTGAGAAACCGCTGTTTCCTCCAGCAGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000481478.1
ENST00000636570.1
ENST00000636629.1
ENST00000636999.2
ENST00000637424.1
CDS TCA 72 bp TGCCAAGACAGGACAGTTTGCTTGGAGCTATTCGGCTaGGAAGTTGGTCCTTCACCAGAAAGAGGAAGTCTG +
Preference number: 6 (lower is better)
Translates to: CQDRTVCLELFG*EVGPSPERGSL
Trigger: CAGACTTCCTCTTTCTGGTGAAGGACCAACTTCTCAGCCGAATAGCTCCAAGCAAACTGTCCTGTCTTGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636480.1
ENST00000636570.1
ENST00000636938.1
ENST00000637424.1
ENST00000640483.1
CDS TCA 72 bp GCACTGGCCAAGGACTACTTAGGAAATAGACTGCACTaGCCACCAGCTGGAGGGACAACTTGGTCAAGTAAT +
Preference number: 6 (lower is better)
Translates to: ALAKDYLGNRLH*PPAGGTTWSSN
Trigger: ATTACTTGACCAAGTTGTCCCTCCAGCTGGTGGTCAGTGCAGTCTATTTCCTAAGTAGTCCTTGGCCAGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636627.1
CDS TCA 72 bp TTGCAACCAATCCTTAGCACGTCCTGTGGAGCGCAGTaGAAACCAAAGGTGGAGAGGCCAAAAACAAGCACA +
Preference number: 6 (lower is better)
Translates to: LQPILSTSCGAQ*KPKVERPKTST
Trigger: TGTGCTTGTTTTTGGCCTCTCCACCTTTGGTTTTCACTGCGCTCCACAGGACGTGCTAAGGATTGGTTGCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637081.1
CDS TCA 72 bp TCTGGGCTTTACTTGAATCTAGGCCGGCAACTGCCATaGTCTGAGGAAAGAGGGGACTGTTGCTGCATTAGA +
Preference number: 6 (lower is better)
Translates to: SGLYLNLGRQLP*SEERGDCCCIR
Trigger: TCTAATGCAGCAACAGTCCCCTCTTTCCTCAGATCATGGCAGTTGCCGGCCTAGATTCAAGTAAAGCCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636629.1
CDS GCA 72 bp GAGAAGTTGGTCCTTCACCAGAAAGAGGAAGTCTGGTaGCTCTTGCATAGTTTGCCTCTCCAAAAGCCAGAG +
Preference number: 6 (lower is better)
Translates to: EKLVLHQKEEVW*LLHSLPLQKPE
Trigger: CTCTGGCTTTTGGAGAGGCAAACTATGCAAGAGGCACCAGACTTCCTCTTTCTGGTGAAGGACCAACTTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637424.1
CDS GCA 72 bp TTTACAAGGCATTTCTATGGCTCCTATCTTGACCGCTaGTTTTCTCGGATCACAGGGCCTCCTTTCTCAGCC +
Preference number: 6 (lower is better)
Translates to: FTRHFYGSYLDR*FSRITGPPFSA
Trigger: GGCTGAGAAAGGAGGCCCTGTGATCCGAGAAAAGCAGCGGTCAAGATAGGAGCCATAGAAATGCCTTGTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636581.2
CDS GCA 72 bp GGCTGCATTCTCCAGACTCTTCTGTGGATGATTAACTaGCCAAACTGGAGTCCTGCCCTGCTATTTCCAGAT +
Preference number: 6 (lower is better)
Translates to: GCILQTLLWMIN*PNWSPALLFPD
Trigger: ATCTGGAAATAGCAGGGCAGGACTCCAGTTTGGGCAGTTAATCATCCACAGAAGAGTCTGGAGAATGCAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636633.2
CDS CCA 72 bp CTATCTACAAAGAGTCCTCCCCTGTCCCTTTTAGACTaGACTTCCGTGTGCCTTAGTAGCCACTGGCCAAAA +
Preference number: 6 (lower is better)
Translates to: LSTKSPPLSLLD*TSVCLSSHWPK
Trigger: TTTTGGCCAGTGGCTACTAAGGCACACGGAAGTCCAGTCTAAAAGGGACAGGGGAGGACTCTTTGTAGATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498251.2
CDS CCA 72 bp GCTGAGAAGTTGGTCCTTCACCAGAAAGAGGAAGTCTaGTGCCTCTTGCATAGTTTGCCTCTCCAAAAGCCA +
Preference number: 6 (lower is better)
Translates to: AEKLVLHQKEEV*CLLHSLPLQKP
Trigger: TGGCTTTTGGAGAGGCAAACTATGCAAGAGGCACCAGACTTCCTCTTTCTGGTGAAGGACCAACTTCTCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637424.1
CDS CAA 90 bp AACACTCGAAAGGCACGGAGGGCTTTGACATCAAAGCCTCCAGATTaGCCGCTTGAGTGGTTCCCGCCTTCTGTTTCTTTGGTTAATTGT +
Preference number: 6 (lower is better)
Translates to: NTRKARRALTSKPPD*PLEWFPPSVSLVNC
Trigger: ACAATTAACCAAAGAAACAGAAGGCGGGAACCACTCAAGCGGCAAATCTGGAGGCTTTGATGTCAAAGCCCTCCGTGCCTTTCGAGTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636570.1
ENST00000636938.1
ENST00000637424.1
ENST00000640483.1
CDS TCA 72 bp CCTATCGTTTACAAGGCATTTCTATGGCTCCTATCTTaGCCGCTGCTTTTCTCGGATCACAGGGCCTCCTTT +
Preference number: 6 (lower is better)
Translates to: PIVYKAFLWLLS*PLLFSDHRASF
Trigger: AAAGGAGGCCCTGTGATCCGAGAAAAGCAGCGGTCAAGATAGGAGCCATAGAAATGCCTTGTAAACGATAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636581.2
CDS GCA 72 bp TGGTCCTTCACCAGAAAGAGGAAGTCTGGTGCCTCTTaGATAGTTTGCCTCTCCAAAAGCCAGAGAGAAGTA +
Preference number: 6 (lower is better)
Translates to: WSFTRKRKSGAS*IVCLSKSQREV
Trigger: TACTTCTCTCTGGCTTTTGGAGAGGCAAACTATGCAAGAGGCACCAGACTTCCTCTTTCTGGTGAAGGACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637424.1
CDS CAA 72 bp TTGGTCCTTCACCAGAAAGAGGAAGTCTGGTGCCTCTaGCATAGTTTGCCTCTCCAAAAGCCAGAGAGAAGT +
Preference number: 6 (lower is better)
Translates to: LVLHQKEEVWCL*HSLPLQKPERS
Trigger: ACTTCTCTCTGGCTTTTGGAGAGGCAAACTATGCAAGAGGCACCAGACTTCCTCTTTCTGGTGAAGGACCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637424.1
CDS CAA 72 bp ACCTATCGTTTACAAGGCATTTCTATGGCTCCTATCTaGACCGCTGCTTTTCTCGGATCACAGGGCCTCCTT +
Preference number: 6 (lower is better)
Translates to: TYRLQGISMAPI*TAAFLGSQGLL
Trigger: AAGGAGGCCCTGTGATCCGAGAAAAGCAGCGGTCAAGATAGGAGCCATAGAAATGCCTTGTAAACGATAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636581.2
CDS CAA 72 bp GCTGCTTGCTACCAAATCTTCAGTGTGCTGTGTCTCTaGGGGGTAAAGCTTGTGACCACTTTAGTACTCCGT +
Preference number: 6 (lower is better)
Translates to: AACYQIFSVLCL*GVKLVTTLVLR
Trigger: ACGGAGTACTAAAGTGGTCACAAGCTTTACCCCCAAGAGACACAGCACACTGAAGATTTGGTAGCAAGCAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637589.2
CDS CAA 90 bp AAAGCACTCAGCCACCTGGCTCAGGCTGTCTTAAGTGCTGGGCACTaGATGTTGATCATGAGCCCTCAGAGTCACCCTTATTTTAAAATG +
Preference number: 6 (lower is better)
Translates to: KALSHLAQAVLSAGH*MLIMSPQSHPYFKM
Trigger: CATTTTAAAATAAGGGTGACTCTGAGGGCTCATGATCAACATCAAGTGCCCAGCACTTAAGACAGCCTGAGCCAGGTGGCTGAGTGCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637589.2
CDS CAA 90 bp GTGCGTGCGCAGGCAGGACCATGCAAAGGACTACCCAAAACGTTTTaGCAAAGAATACAAACGCAGGCTGAATTCAATCATTTCTCAGCC +
Preference number: 6 (lower is better)
Translates to: VRAQAGPCKGLPKTF*QRIQTQAEFNHFSA
Trigger: GGCTGAGAAATGATTGAATTCAGCCTGCGTTTGTATTCTTTGCAAAAACGTTTTGGGTAGTCCTTTGCATGGTCCTGCCTGCGCACGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637081.1
CDS CAA 90 bp ATGCTGGGCCGCTTTCCATGGGCAGCTTTGGACATATTGGCATTATaGAGATTGGCATTTGTTGAGGTGGGAACTTGCTTTCCTATGGAA +
Preference number: 6 (lower is better)
Translates to: MLGRFPWAALDILAL*RLAFVEVGTCFPME
Trigger: TTCCATAGGAAAGCAAGTTCCCACCTCAACAAATGCCAATCTCAATAATGCCAATATGTCCAAAGCTGCCCATGGAAAGCGGCCCAGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000481478.1
ENST00000636448.1
ENST00000636570.1
ENST00000636629.1
ENST00000636633.2
ENST00000636999.2
ENST00000637424.1
CDS TCA 72 bp GGCCCAAGCTGTACATTTTTACCAGCATCTCGCAGGTaGACAGAGCCAAGAGGACTTTGTTGGCAATATCTT +
Preference number: 6 (lower is better)
Translates to: GPSCTFLPASRR*TEPRGLCWQYL
Trigger: AAGATATTGCCAACAAAGTCCTCTTGGCTCTGTTCACCTGCGAGATGCTGGTAAAAATGTACAGCTTGGGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000481478.1
ENST00000636570.1
ENST00000636627.1
ENST00000636938.1
ENST00000637424.1
ENST00000640483.1
CDS TCA 72 bp GGAGATGACAATCTATGGGATGGGGAACAATTTAGATaGTTGCAACCAATCCTTAGCACGTCCTGTGGAGCG +
Preference number: 6 (lower is better)
Translates to: GDDNLWDGEQFR*LQPILSTSCGA
Trigger: CGCTCCACAGGACGTGCTAAGGATTGGTTGCAATCATCTAAATTGTTCCCCATCCCATAGATTGTCATCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637081.1
CDS GCA 72 bp TCTTCTTCTCGTTTTGTTTCCTCAGGCTCGTCATCTTaGAAATCACACGATATAGCACGCCGGATTTCTGGC +
Preference number: 6 (lower is better)
Translates to: SSSRFVSSGSSS*KSHDIARRISG
Trigger: GCCAGAAATCCGGCGTGCTATATCGTGTGATTTGCAAGATGACGAGCCTGAGGAAACAAAACGAGAAGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000481478.1
ENST00000636448.1
ENST00000636570.1
ENST00000636629.1
ENST00000636633.2
ENST00000636999.2
ENST00000637424.1
CDS CCA 72 bp GCTTTGACATCAAAGCCTCCAGATTTGCCGCTTGAGTaGTTCCCGCCTTCTGTTTCTTTGGTTAATTGTTCC +
Preference number: 6 (lower is better)
Translates to: ALTSKPPDLPLE*FPPSVSLVNCS
Trigger: GGAACAATTAACCAAAGAAACAGAAGGCGGGAACCACTCAAGCGGCAAATCTGGAGGCTTTGATGTCAAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636570.1
ENST00000636938.1
ENST00000637424.1
ENST00000640483.1
CDS CAA 72 bp GCTGGTGGGCATGCTAGCATGATCTTTAGCCCTGCGTaGCCGAAAGCAGCAAAACTTCTTTTTCTTCTTATC +
Preference number: 6 (lower is better)
Translates to: AGGHASMIFSPA*PKAAKLLFLLI
Trigger: GATAAGAAGAAAAAGAAGTTTTGCTGCTTTCGGCAACGCAGGGCTAAAGATCATGCTAGCATGCCCACCAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000481085.5
ENST00000637301.1
CDS CAA 72 bp CTGGCTCAGGCTGTCTTAAGTGCTGGGCACTTGATGTaGATCATGAGCCCTCAGAGTCACCCTTATTTTAAA +
Preference number: 6 (lower is better)
Translates to: LAQAVLSAGHLM*IMSPQSHPYFK
Trigger: TTTAAAATAAGGGTGACTCTGAGGGCTCATGATCAACATCAAGTGCCCAGCACTTAAGACAGCCTGAGCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637589.2
CDS TCA 72 bp TCACCAATCGCATCACTCGGAAAAGACGGAAAAAGGTaGTGGAGATTCTATTGCTCTCTTCAGAGTTCCCAG +
Preference number: 6 (lower is better)
Translates to: SPIASLGKDGKR*WRFYCSLQSSQ
Trigger: CTGGGAACTCTGAAGAGAGCAATAGAATCTCCATCACCTTTTTCCGTCTTTTCCGAGTGATGCGATTGGTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000481478.1
ENST00000636448.1
ENST00000636627.1
ENST00000636938.1
ENST00000645528.2
CDS TCA 72 bp ATGAGCCCTCAGAGTCACCCTTATTTTAAAATGTGCTaGCGGTGGCATCCATTGACATGGATCCTGAAGCTT +
Preference number: 6 (lower is better)
Translates to: MSPQSHPYFKMC*RWHPLTWILKL
Trigger: AAGCTTCAGGATCCATGTCAATGGATGCCACCGTCAGCACATTTTAAAATAAGGGTGACTCTGAGGGCTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637589.2
CDS GCA 72 bp ATGACAATCTATGGGATGGGGAACAATTTAGATGATTaGAACCAATCCTTAGCACGTCCTGTGGAGCGCAGT +
Preference number: 6 (lower is better)
Translates to: MTIYGMGNNLDD*NQSLARPVERS
Trigger: ACTGCGCTCCACAGGACGTGCTAAGGATTGGTTGCAATCATCTAAATTGTTCCCCATCCCATAGATTGTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637081.1
CDS CAA 72 bp TTCTTCTTCTCGTTTTGTTTCCTCAGGCTCGTCATCTaGCAAATCACACGATATAGCACGCCGGATTTCTGG +
Preference number: 6 (lower is better)
Translates to: FFFSFCFLRLVI*QITRYSTPDFW
Trigger: CCAGAAATCCGGCGTGCTATATCGTGTGATTTGCAAGATGACGAGCCTGAGGAAACAAAACGAGAAGAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000481478.1
ENST00000636448.1
ENST00000636570.1
ENST00000636629.1
ENST00000636633.2
ENST00000636999.2
ENST00000637424.1
CDS CAA 90 bp GAGACAAATGTCAGTGACAGCCATCCATGGGTTAGGGACAGTATGTaGCTGGGTCATTTCATCATTCAAGGAACAAACAGGCATCAAAGA +
Preference number: 6 (lower is better)
Translates to: ETNVSDSHPWVRDSM*LGHFIIQGTNRHQR
Trigger: TCTTTGATGCCTGTTTGTTCCTTGAATGATGAAATGACCCAGCAACATACTGTCCCTAACCCATGGATGGCTGTCACTGACATTTGTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637081.1
CDS TCA 72 bp TCACCAATCGCATCACTCGGAAAAGACGGAAAAAGGTaGTGGAGATTCTATTGCTCTCTTCAGAGTTGTCTG +
Preference number: 6 (lower is better)
Translates to: SPIASLGKDGKR*WRFYCSLQSCL
Trigger: CAGACAACTCTGAAGAGAGCAATAGAATCTCCATCACCTTTTTCCGTCTTTTCCGAGTGATGCGATTGGTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000422281.7
ENST00000636570.1
ENST00000637424.1
ENST00000638120.1
CDS GCA 72 bp ATTTTCTTTATCACAGCCCGAAGTTCTTCATTAGCTTaGTCCAGGTTCCCTTCGGTCTTGATCTTAAGAGCC +
Preference number: 6 (lower is better)
Translates to: IFFITARSSSLA*SRFPSVLILRA
Trigger: GGCTCTTAAGATCAAGACCGAAGGGAACCTGGAGCAAGCTAATGAAGAACTTCGGGCTGTGATAAAGAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000481478.1
ENST00000636448.1
ENST00000636570.1
ENST00000636595.1
ENST00000636627.1
ENST00000636633.2
ENST00000636938.1
ENST00000637424.1
ENST00000638120.1
ENST00000640483.1
ENST00000645528.2
CDS CCA 72 bp CAATCAAACCGGTTGAAAAGAGAGACGAAATATGCTTaGAGGCCCAAGCTGTACATTTTTACCAGCATCTCG +
Preference number: 6 (lower is better)
Translates to: QSNRLKRETKYA*RPKLYIFTSIS
Trigger: CGAGATGCTGGTAAAAATGTACAGCTTGGGCCTCCAAGCATATTTCGTCTCTCTTTTCAACCGGTTTGATTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000481478.1
ENST00000636570.1
ENST00000636627.1
ENST00000636938.1
ENST00000637424.1
ENST00000640483.1
CDS CCA 72 bp CTTTTAGACTGGACTTCCGTGTGCCTTAGTAGCCACTaGCCAAAAATTCTCTGTTGGCCAAGATATGGAATT +
Preference number: 6 (lower is better)
Translates to: LLDWTSVCLSSH*PKILCWPRYGI
Trigger: AATTCCATATCTTGGCCAACAGAGAATTTTTGGCCAGTGGCTACTAAGGCACACGGAAGTCCAGTCTAAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000498251.2
CDS CCA 72 bp TTCAAGGGCAAGTCTCAGAACAGTAGAGATGGTAGGTaGCTGTTGGCATTTGGAGCAAATCTTCAGACTTTT +
Preference number: 6 (lower is better)
Translates to: FKGKSQNSRDGR*LLAFGANLQTF
Trigger: AAAAGTCTGAAGATTTGCTCCAAATGCCAACAGCCACCTACCATCTCTACTGTTCTGAGACTTGCCCTTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637424.1
CDS CCA 72 bp TTTCTCAGCCAGATCATTCATTCTGGAAGACTATGTTaGCAAGTCACAGAGCCAAGTGTGACTGACCAAGAT +
Preference number: 6 (lower is better)
Translates to: FLSQIIHSGRLC*QVTEPSVTDQD
Trigger: ATCTTGGTCAGTCACACTTGGCTCTGTGACTTGCCAACATAGTCTTCCAGAATGAATGATCTGGCTGAGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637081.1
CDS CAA 72 bp GCAATCAAACCGGTTGAAAAGAGAGACGAAATATGCTaGGAGGCCCAAGCTGTACATTTTTACCAGCATCTC +
Preference number: 6 (lower is better)
Translates to: AIKPVEKRDEIC*EAQAVHFYQHL
Trigger: GAGATGCTGGTAAAAATGTACAGCTTGGGCCTCCAAGCATATTTCGTCTCTCTTTTCAACCGGTTTGATTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000481478.1
ENST00000636570.1
ENST00000636627.1
ENST00000636938.1
ENST00000637424.1
ENST00000640483.1
CDS CAA 72 bp GGCAAGTCTCAGAACAGTAGAGATGGTAGGTGGCTGTaGGCATTTGGAGCAAATCTTCAGACTTTTAAAGCA +
Preference number: 6 (lower is better)
Translates to: GKSQNSRDGRWL*AFGANLQTFKA
Trigger: TGCTTTAAAAGTCTGAAGATTTGCTCCAAATGCCAACAGCCACCTACCATCTCTACTGTTCTGAGACTTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637424.1
CDS TCA 72 bp CAAATCCCGATGTCTCAAGATAGAGACCTAGAAAGGTaGCATACATGCTCAGAAGGAGAGGAAGGTTTAGAA +
Preference number: 6 (lower is better)
Translates to: QIPMSQDRDLER*HTCSEGEEGLE
Trigger: TTCTAAACCTTCCTCTCCTTCTGAGCATGTATGTCACCTTTCTAGGTCTCTATCTTGAGACATCGGGATTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637589.2
CDS CCA 72 bp GTGTGCCTTAGTAGCCACTGGCCAAAAATTCTCTGTTaGCCAAGATATGGAATTAACTCACTATTGCAGTAC +
Preference number: 6 (lower is better)
Translates to: VCLSSHWPKILC*PRYGINSLLQY
Trigger: GTACTGCAATAGTGAGTTAATTCCATATCTTGGCCAACAGAGAATTTTTGGCCAGTGGCTACTAAGGCACAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000498251.2
CDS CCA 72 bp TTGCTTTGTTCAGAAACAACCTCCAACGTGTATGGTTaGGGAATCAGAACTCTGCTGATGACTTTAAAGGTG +
Preference number: 6 (lower is better)
Translates to: LLCSETTSNVYG*GIRTLLMTLKV
Trigger: CACCTTTAAAGTCATCAGCAGAGTTCTGATTCCCCAACCATACACGTTGGAGGTTGTTTCTGAACAAAGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637589.2
CDS CAA 72 bp AATTTTCTTTATCACAGCCCGAAGTTCTTCATTAGCTaGCTCCAGGTTCCCTTCGGTCTTGATCTTAAGAGC +
Preference number: 6 (lower is better)
Translates to: NFLYHSPKFFIS*LQVPFGLDLKS
Trigger: GCTCTTAAGATCAAGACCGAAGGGAACCTGGAGCAAGCTAATGAAGAACTTCGGGCTGTGATAAAGAAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000481478.1
ENST00000636448.1
ENST00000636570.1
ENST00000636595.1
ENST00000636627.1
ENST00000636633.2
ENST00000636938.1
ENST00000637424.1
ENST00000638120.1
ENST00000640483.1
ENST00000645528.2
CDS CAA 72 bp CATCTGTATTTAAAGAAACAACGTAGGGGAATACAGTaGGCAAGAGATAACTCTGATTCCATGCCACCACCC +
Preference number: 6 (lower is better)
Translates to: HLYLKKQRRGIQ*ARDNSDSMPPP
Trigger: GGGTGGTGGCATGGAATCAGAGTTATCTCTTGCCAACTGTATTCCCCTACGTTGTTTCTTTAAATACAGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636595.1
CDS TCA 72 bp TCACCAATCGCATCACTCGGAAAAGACGGAAAAAGGTaGTGGAGATTCTATTGCTCTCTTCAGAGTTATTCA +
Preference number: 6 (lower is better)
Translates to: SPIASLGKDGKR*WRFYCSLQSYS
Trigger: TGAATAACTCTGAAGAGAGCAATAGAATCTCCATCACCTTTTTCCGTCTTTTCCGAGTGATGCGATTGGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000640483.1
CDS GCA 72 bp AGGCAGGACCATGCAAAGGACTACCCAAAACGTTTTTaGAAAGAATACAAACGCAGGCTGAATTCAATCATT +
Preference number: 6 (lower is better)
Translates to: RQDHAKDYPKRF*KEYKRRLNSII
Trigger: AATGATTGAATTCAGCCTGCGTTTGTATTCTTTGCAAAAACGTTTTGGGTAGTCCTTTGCATGGTCCTGCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637081.1
CDS CAA 72 bp TTTGCTTTGTTCAGAAACAACCTCCAACGTGTATGGTaGGGGAATCAGAACTCTGCTGATGACTTTAAAGGT +
Preference number: 6 (lower is better)
Translates to: FALFRNNLQRVW*GNQNSADDFKG
Trigger: ACCTTTAAAGTCATCAGCAGAGTTCTGATTCCCCAACCATACACGTTGGAGGTTGTTTCTGAACAAAGCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637589.2
CDS CAA 90 bp AAGCCTCCAGATTTGCCGCTTGAGTGGTTCCCGCCTTCTGTTTCTTaGGTTAATTGTTCCAAAATTACACTAAACAATCCTACTATTACT +
Preference number: 6 (lower is better)
Translates to: KPPDLPLEWFPPSVS*VNCSKITLNNPTIT
Trigger: AGTAATAGTAGGATTGTTTAGTGTAATTTTGGAACAATTAACCAAAGAAACAGAAGGCGGGAACCACTCAAGCGGCAAATCTGGAGGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636570.1
ENST00000636938.1
ENST00000637424.1
ENST00000640483.1
CDS GCA 72 bp TGCGTTTCATCAAAATTAAACTTGCCGCCAAACAGCTaGATCCCAAGCAAGGAAAAGATGATAATGAAGAGA +
Preference number: 6 (lower is better)
Translates to: CVSSKLNLPPNS*IPSKEKMIMKR
Trigger: TCTCTTCATTATCATCTTTTCCTTGCTTGGGATGCAGCTGTTTGGCGGCAAGTTTAATTTTGATGAAACGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000481478.1
ENST00000636570.1
ENST00000636627.1
ENST00000636938.1
ENST00000637424.1
ENST00000640483.1
CDS GCA 72 bp TGTGTTTACACCTGTTTTAAAGGGAGGGACTTTACCTaGACTGATCAGCTTGACCAGGTAATAAGCAAATTA +
Preference number: 6 (lower is better)
Translates to: CVYTCFKGRDFT*TDQLDQVISKL
Trigger: TAATTTGCTTATTACCTGGTCAAGCTGATCAGTGCAGGTAAAGTCCCTCCCTTTAAAACAGGTGTAAACACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636581.2
CDS GCA 72 bp CATTTCTTGGTTTGTAATTCTGAACAGCTCATTTTCTaGACTGTAGTGACAGCTCCAACCAACCTCATAGTT +
Preference number: 6 (lower is better)
Translates to: HFLVCNSEQLIF*TVVTAPTNLIV
Trigger: AACTATGAGGTTGGTTGGAGCTGTCACTACAGTGCAGAAAATGAGCTGTTCAGAATTACAAACCAAGAAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637589.2
CDS CCA 72 bp GATTGGCATTTGTTGAGGTGGGAACTTGCTTTCCTATaGAATTATGGTTATGATGGTTATGACACACCGAAT +
Preference number: 6 (lower is better)
Translates to: DWHLLRWELAFL*NYGYDGYDTPN
Trigger: ATTCGGTGTGTCATAACCATCATAACCATAATTCCATAGGAAAGCAAGTTCCCACCTCAACAAATGCCAATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000481478.1
ENST00000636448.1
ENST00000636570.1
ENST00000636629.1
ENST00000636633.2
ENST00000636999.2
ENST00000637424.1
CDS CCA 72 bp ATTTTTGCTTTGTTCAGAAACAACCTCCAACGTGTATaGTTGGGGAATCAGAACTCTGCTGATGACTTTAAA +
Preference number: 6 (lower is better)
Translates to: IFALFRNNLQRV*LGNQNSADDFK
Trigger: TTTAAAGTCATCAGCAGAGTTCTGATTCCCCAACCATACACGTTGGAGGTTGTTTCTGAACAAAGCAAAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637589.2
CDS CAA 72 bp CCCTATTCTCCACCAATAAGCTCCATATACCATTTCTaGGTTTGTAATTCTGAACAGCTCATTTTCTGCACT +
Preference number: 6 (lower is better)
Translates to: PYSPPISSIYHF*VCNSEQLIFCT
Trigger: AGTGCAGAAAATGAGCTGTTCAGAATTACAAACCAAGAAATGGTATATGGAGCTTATTGGTGGAGAATAGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637589.2
CDS TCA 72 bp AAAAATCCGTATGTGAATTTAGAACTAACTCAGGTTTaGTCTTTACCAGCTAGGGTTTTCTCATGGTACCTG +
Preference number: 6 (lower is better)
Translates to: KNPYVNLELTQV*SLPARVFSWYL
Trigger: CAGGTACCATGAGAAAACCCTAGCTGGTAAAGATCAAACCTGAGTTAGTTCTAAATTCACATACGGATTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636633.2
CDS CAA 90 bp TGGCCAAAAATTCTCTGTTGGCCAAGATATGGAATTAACTCACTATaGCAGTACAGTTTTATTCTGAATATGGTGACAAATCATGCCGAT +
Preference number: 6 (lower is better)
Translates to: WPKILCWPRYGINSL*QYSFILNMVTNHAD
Trigger: ATCGGCATGATTTGTCACCATATTCAGAATAAAACTGTACTGCAATAGTGAGTTAATTCCATATCTTGGCCAACAGAGAATTTTTGGCCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000498251.2