RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CACNA1D (Homo sapiens)

Ensembl gene IDs: ENSG00000157388

Ensembl transcript IDs: ENST00000288139.11, ENST00000350061.11, ENST00000422281.7, ENST00000464429.1, ENST00000481085.5, ENST00000481478.1, ENST00000498251.2, ENST00000636138.1, ENST00000636448.1, ENST00000636480.1, ENST00000636570.1, ENST00000636581.2, ENST00000636595.1, ENST00000636627.1, ENST00000636629.1, ENST00000636633.2, ENST00000636723.1, ENST00000636938.1, ENST00000636999.2, ENST00000637078.1, ENST00000637081.1, ENST00000637301.1, ENST00000637424.1, ENST00000637589.2, ENST00000637714.1, ENST00000637844.1, ENST00000638120.1, ENST00000640483.1, ENST00000645528.2

Found 2075 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCCTCCTCACCCATCCTCTGTGAGAGGGCGGGGCCTGCTGTTTCCTaGAGCTGGGGCCGAGCGCATGGTACTCTGCCAGGCTCAACCGCT +
Preference number: 1 (lower is better)
Translates to: ASSPILCERAGPAVS*SWGRAHGTLPGSTA
Trigger: AGCGGTTGAGCCTGGCAGAGTACCATGCGCTCGGCCCCAGCTGCAGGAAACAGCAGGCCCCGCCCTCTCACAGAGGATGGGTGAGGAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
3UTR GCA 90 bp CGGGCTCGTCTGTGTACCAGGAGCTGCGGTGCAGGGACGGCAGGCTaGCGTTCACCTGGTCCAGGGCCTCTGACTGCTCCACTTGGATCA +
Preference number: 1 (lower is better)
Translates to: RARLCTRSCGAGTAG*RSPGPGPLTAPLGS
Trigger: TGATCCAAGTGGAGCAGTCAGAGGCCCTGGACCAGGTGAACGGCAGCCTGCCGTCCCTGCACCGCAGCTCCTGGTACACAGACGAGCCCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR CCA 90 bp TCACCCATCCTCTGTGAGAGGGCGGGGCCTGCTGTTTCCTGCAGCTaGGGCCGAGCGCATGGTACTCTGCCAGGCTCAACCGCTTGGGAC +
Preference number: 1 (lower is better)
Translates to: SPILCERAGPAVSCS*GRAHGTLPGSTAWD
Trigger: GTCCCAAGCGGTTGAGCCTGGCAGAGTACCATGCGCTCGGCCCCAGCTGCAGGAAACAGCAGGCCCCGCCCTCTCACAGAGGATGGGTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
3UTR CCA 90 bp GTTGCTGCATTAGATGCAGAGGCAGGGCCGTGCGATGGGGGAAGATaGGAGACGACGGGACCTCTTCCTGGCTGCTCTGCCGGCGCAGGC +
Preference number: 1 (lower is better)
Translates to: VAALDAEAGPCDGGR*ETTGPLPGCSAGAG
Trigger: GCCTGCGCCGGCAGAGCAGCCAGGAAGAGGTCCCGTCGTCTCCCATCTTCCCCCATCGCACGGCCCTGCCTCTGCATCTAATGCAGCAAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR CCA 90 bp CCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGTACATaGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGC +
Preference number: 1 (lower is better)
Translates to: PAAMPSVGWAWCPGT*EKQTPQQCPSGQWG
Trigger: GCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTACCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
3UTR CCA 90 bp CCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTaGTACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACA +
Preference number: 1 (lower is better)
Translates to: PAPRRHAFSWVGLVP*YMGEADSTAVPIWT
Trigger: TGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTACCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
3UTR GCA 90 bp TTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTaGCCTGGTACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCT +
Preference number: 1 (lower is better)
Translates to: FPLHPAAMPSVGWAW*PGTWEKQTPQQCPS
Trigger: AGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTACCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
3UTR CCA 90 bp AACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTaGTGCCCTGGTACATGGGAGAAGCAGACTCCACAGCAGTGCCCA +
Preference number: 1 (lower is better)
Translates to: NFPLHPAAMPSVGWA*CPGTWEKQTPQQCP
Trigger: TGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTACCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
3UTR CCA 90 bp AGGGCCGTGCGATGGGGGAAGATGGGAGACGACGGGACCTCTTCCTaGCTGCTCTGCCGGCGCAGGCACTCAAAGTTGAAGGAGGATCTC +
Preference number: 1 (lower is better)
Translates to: RAVRWGKMGDDGTSS*LLCRRRHSKLKEDL
Trigger: GAGATCCTCCTTCAACTTTGAGTGCCTGCGCCGGCAGAGCAGCCAGGAAGAGGTCCCGTCGTCTCCCATCTTCCCCCATCGCACGGCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR GCA 90 bp GCTTCCTGGCCTGTCCACTTCTCACTGTATTCTGGACTGGGTCTCTaGAGAGAGCAGGGCCGGACGCTCAGGAGGTCATGGCGGACTGGC +
Preference number: 1 (lower is better)
Translates to: ASWPVHFSLYSGLGL*REQGRTLRRSWRTG
Trigger: GCCAGTCCGCCATGACCTCCTGAGCGTCCGGCCCTGCTCTCTGCAGAGACCCAGTCCAGAATACAGTGAGAAGTGGACAGGCCAGGAAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
3UTR CCA 90 bp TCTCTGCAGAGAGCAGGGCCGGACGCTCAGGAGGTCATGGCGGACTaGCATACAAAAGGAACTCTGTCAGCTCAGCGCCGAGGGGCCTGT +
Preference number: 1 (lower is better)
Translates to: SLQRAGPDAQEVMAD*HTKGTLSAQRRGAC
Trigger: ACAGGCCCCTCGGCGCTGAGCTGACAGAGTTCCTTTTGTATGCCAGTCCGCCATGACCTCCTGAGCGTCCGGCCCTGCTCTCTGCAGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
3UTR TCA 90 bp CTGAGGCCAGAGCCAGTCTGCCCCTCGCTGGGGGCTACAAGGTGGTaGTGCATATCATTTCATCCGCCAGGTCCTCCTCATCCCTCCCAG +
Preference number: 1 (lower is better)
Translates to: LRPEPVCPSLGATRW*CISFHPPGPPHPSQ
Trigger: CTGGGAGGGATGAGGAGGACCTGGCGGATGAAATGATATGCATCACCACCTTGTAGCCCCCAGCGAGGGGCAGACTGGCTCTGGCCTCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR CCA 90 bp ACCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTaGGCCTGGTGCCCTGGTACATGGGAGAAGCAGACTCCACAGCAG +
Preference number: 1 (lower is better)
Translates to: TFNFPLHPAAMPSVG*AWCPGTWEKQTPQQ
Trigger: CTGCTGTGGAGTCTGCTTCTCCCATGTACCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
3UTR CCA 90 bp GCCATGATCTGTTGCTGCATTAGATGCAGAGGCAGGGCCGTGCGATaGGGGAAGATGGGAGACGACGGGACCTCTTCCTGGCTGCTCTGC +
Preference number: 1 (lower is better)
Translates to: AMICCCIRCRGRAVR*GKMGDDGTSSWLLC
Trigger: GCAGAGCAGCCAGGAAGAGGTCCCGTCGTCTCCCATCTTCCCCCATCGCACGGCCCTGCCTCTGCATCTAATGCAGCAACAGATCATGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR GCA 90 bp GGTAGCCTCGGGGCCTCTCAGAGTCGATGTTTCTGCCTGGGTATCTaGTGTAGTAGCCATAGTTTTGCCTGCTCCAGGTGGGCGAGCTGT +
Preference number: 1 (lower is better)
Translates to: GSLGASQSRCFCLGI*CSSHSFACSRWASC
Trigger: ACAGCTCGCCCACCTGGAGCAGGCAAAACTATGGCTACTACAGCAGATACCCAGGCAGAAACATCGACTCTGAGAGGCCCCGAGGCTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR GCA 90 bp CCTTCGGATATCAGGACTGCCTCCACCAAGCTGTCCGCACTCCTCTaGTTGTCGCTGTTTTTGTTCCGGAAGCTGCTGGGGACAGTCAGG +
Preference number: 1 (lower is better)
Translates to: PSDIRTASTKLSALL*LSLFLFRKLLGTVR
Trigger: CCTGACTGTCCCCAGCAGCTTCCGGAACAAAAACAGCGACAAGCAGAGGAGTGCGGACAGCTTGGTGGAGGCAGTCCTGATATCCGAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR CCA 90 bp GGGATGATGGTAGCCTCGGGGCCTCTCAGAGTCGATGTTTCTGCCTaGGTATCTGCTGTAGTAGCCATAGTTTTGCCTGCTCCAGGTGGG +
Preference number: 1 (lower is better)
Translates to: GMMVASGPLRVDVSA*VSAVVAIVLPAPGG
Trigger: CCCACCTGGAGCAGGCAAAACTATGGCTACTACAGCAGATACCCAGGCAGAAACATCGACTCTGAGAGGCCCCGAGGCTACCATCATCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR TCA 90 bp GTCGATGGTGAGGTCACAGGCATCAGCGATTTCGTGTTTTGTTGCTaGCACAAATTTTGGGTCCCTTGCATAGCGTCCCAAGCCTTCGGA +
Preference number: 1 (lower is better)
Translates to: VDGEVTGISDFVFCC*HKFWVPCIASQAFG
Trigger: TCCGAAGGCTTGGGACGCTATGCAAGGGACCCAAAATTTGTGTCAGCAACAAAACACGAAATCGCTGATGCCTGTGACCTCACCATCGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR GCA 90 bp AGGATAAGAATATCCATAATTTCAGAGCTGCCCTGGCACAGTACCTaGCCTGTCGGAGGCTCTCACTGGCAAATGACAGCTCTGTGCAAG +
Preference number: 1 (lower is better)
Translates to: RIRISIISELPWHST*PVGGSHWQMTALCK
Trigger: CTTGCACAGAGCTGTCATTTGCCAGTGAGAGCCTCCGACAGGGCAGGTACTGTGCCAGGGCAGCTCTGAAATTATGGATATTCTTATCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
3UTR CCA 90 bp GAAGGAACCAGGAGGATAAGAATATCCATAATTTCAGAGCTGCCCTaGCACAGTACCTGCCCTGTCGGAGGCTCTCACTGGCAAATGACA +
Preference number: 1 (lower is better)
Translates to: EGTRRIRISIISELP*HSTCPVGGSHWQMT
Trigger: TGTCATTTGCCAGTGAGAGCCTCCGACAGGGCAGGTACTGTGCCAGGGCAGCTCTGAAATTATGGATATTCTTATCCTCCTGGTTCCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
3UTR CCA 90 bp GATCATCGCCTCTATCAGACACTTAGGGTCCTGGTCTGGCAATTTTaGCCTGATGTGATGCCACAAGACCCAACAGAGAGAGACACAGAG +
Preference number: 1 (lower is better)
Translates to: DHRLYQTLRVLVWQF*PDVMPQDPTERDTE
Trigger: CTCTGTGTCTCTCTCTGTTGGGTCTTGTGGCATCACATCAGGCCAAAATTGCCAGACCAGGACCCTAAGTGTCTGATAGAGGCGATGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
3UTR GCA 90 bp AACCGTAACTATGGATACCCAAGGGGCAGAGCAGCCAGCTGGACCTaGTCTGTAATTCACTTACTTACTTACCAGAGGGTGGTTCAAGTC +
Preference number: 1 (lower is better)
Translates to: NRNYGYPRGRAASWT*SVIHLLTYQRVVQV
Trigger: GACTTGAACCACCCTCTGGTAAGTAAGTAAGTGAATTACAGAGCAGGTCCAGCTGGCTGCTCTGCCCCTTGGGTATCCATAGTTACGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
3UTR TCA 90 bp TGGTTTTGGCATGCGGGTGTATGTGTTAGTTTCAATGGGTGTATCTaGGCTTCCTGGCCTGTCCACTTCTCACTGTATTCTGGACTGGGT +
Preference number: 1 (lower is better)
Translates to: WFWHAGVCVSFNGCI*ASWPVHFSLYSGLG
Trigger: ACCCAGTCCAGAATACAGTGAGAAGTGGACAGGCCAGGAAGCTCAGATACACCCATTGAAACTAACACATACACCCGCATGCCAAAACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
3UTR GCA 90 bp GGGAAGAATGATGCCCATTTTCAGACACATGCTCAAGGTTCCCAATaGTGGGCCGCTTTCCATGGGCAGCTTTGGACATATTGGCATTAT +
Preference number: 1 (lower is better)
Translates to: GKNDAHFQTHAQGSQ*WAAFHGQLWTYWHY
Trigger: ATAATGCCAATATGTCCAAAGCTGCCCATGGAAAGCGGCCCAGCATTGGGAACCTTGAGCATGTGTCTGAAAATGGGCATCATTCTTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR CCA 90 bp AGAGAAAACCGTAACTATGGATACCCAAGGGGCAGAGCAGCCAGCTaGACCTGCTCTGTAATTCACTTACTTACTTACCAGAGGGTGGTT +
Preference number: 1 (lower is better)
Translates to: RENRNYGYPRGRAAS*TCSVIHLLTYQRVV
Trigger: AACCACCCTCTGGTAAGTAAGTAAGTGAATTACAGAGCAGGTCCAGCTGGCTGCTCTGCCCCTTGGGTATCCATAGTTACGGTTTTCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
3UTR CCA 90 bp GGTGTCTTGGGCTCAGCATCAGATGTACAGACTCCAACCACCACTTaGAATCAGCTGAGAATTCAAGATCAGACACCCTTATCGACCAAC +
Preference number: 1 (lower is better)
Translates to: GVLGSASDVQTPTTT*NQLRIQDQTPLSTN
Trigger: GTTGGTCGATAAGGGTGTCTGATCTTGAATTCTCAGCTGATTCCAAGTGGTGGTTGGAGTCTGTACATCTGATGCTGAGCCCAAGACACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636938.1
3UTR TCA 90 bp GCTCAGCATCAGATGTACAGACTCCAACCACCACTTGGAATCAGCTaGGAATTCAAGATCAGACACCCTTATCGACCAACATCTTGGGCA +
Preference number: 1 (lower is better)
Translates to: AQHQMYRLQPPLGIS*EFKIRHPYRPTSWA
Trigger: TGCCCAAGATGTTGGTCGATAAGGGTGTCTGATCTTGAATTCTCAGCTGATTCCAAGTGGTGGTTGGAGTCTGTACATCTGATGCTGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636938.1
3UTR CCA 90 bp TTTGGAAAAGATCATCGCCTCTATCAGACACTTAGGGTCCTGGTCTaGCAATTTTGGCCTGATGTGATGCCACAAGACCCAACAGAGAGA +
Preference number: 1 (lower is better)
Translates to: FGKDHRLYQTLRVLV*QFWPDVMPQDPTER
Trigger: TCTCTCTGTTGGGTCTTGTGGCATCACATCAGGCCAAAATTGCCAGACCAGGACCCTAAGTGTCTGATAGAGGCGATGATCTTTTCCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
3UTR CCA 90 bp TTTCCTGTGGACACGTTAAGATGGAACCTGAGGTGTTGCCTGGATTaGTTTTGGCATGCGGGTGTATGTGTTAGTTTCAATGGGTGTATC +
Preference number: 1 (lower is better)
Translates to: FPVDTLRWNLRCCLD*FWHAGVCVSFNGCI
Trigger: GATACACCCATTGAAACTAACACATACACCCGCATGCCAAAACCAATCCAGGCAACACCTCAGGTTCCATCTTAACGTGTCCACAGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
3UTR CCA 90 bp TTTTCAGACACATGCTCAAGGTTCCCAATGCTGGGCCGCTTTCCATaGGCAGCTTTGGACATATTGGCATTATTGAGATTGGCATTTGTT +
Preference number: 1 (lower is better)
Translates to: FSDTCSRFPMLGRFP*AALDILALLRLAFV
Trigger: AACAAATGCCAATCTCAATAATGCCAATATGTCCAAAGCTGCCCATGGAAAGCGGCCCAGCATTGGGAACCTTGAGCATGTGTCTGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR CCA 90 bp GACAGTCAGAAACCGACCATCGGAGTGATATTCTCTTATGTAAACTaGCGTCACATCACAGAAAACCTTATTTATGAGGTCCCATTGCCC +
Preference number: 1 (lower is better)
Translates to: DSQKPTIGVIFSYVN*RHITENLIYEVPLP
Trigger: GGGCAATGGGACCTCATAAATAAGGTTTTCTGTGATGTGACGCCAGTTTACATAAGAGAATATCACTCCGATGGTCGGTTTCTGACTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
3UTR TCA 90 bp ATTCTCTTATGTAAACTGGCGTCACATCACAGAAAACCTTATTTATaGGGTCCCATTGCCCTCGCAATAATCACTGGTAGCTGGGTTCTG +
Preference number: 1 (lower is better)
Translates to: ILLCKLASHHRKPYL*GPIALAIITGSWVL
Trigger: CAGAACCCAGCTACCAGTGATTATTGCGAGGGCAATGGGACCTCATAAATAAGGTTTTCTGTGATGTGACGCCAGTTTACATAAGAGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
3UTR TCA 90 bp TGGTTGCGAGTGCATTATTATTCCAGTTTACAGTTGCCCTTAGCGTaGCAGTCAGAAACCGACCATCGGAGTGATATTCTCTTATGTAAA +
Preference number: 1 (lower is better)
Translates to: WLRVHYYSSLQLPLA*QSETDHRSDILLCK
Trigger: TTTACATAAGAGAATATCACTCCGATGGTCGGTTTCTGACTGTCACGCTAAGGGCAACTGTAAACTGGAATAATAATGCACTCGCAACCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
3UTR GCA 90 bp ACCCATGGTGGATCCAAAGGTACAGTATCAAAATCATGGAACTCTTaGCCAAAGAAAAGACTGCAAATAGTCATCTGGTATATCTTGTGG +
Preference number: 1 (lower is better)
Translates to: THGGSKGTVSKSWNS*PKKRLQIVIWYILW
Trigger: CCACAAGATATACCAGATGACTATTTGCAGTCTTTTCTTTGGGCAAGAGTTCCATGATTTTGATACTGTACCTTTGGATCCACCATGGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
3UTR GCA 90 bp TTACCAGAGGGTGGTTCAAGTCAAACAAACAAAACCAAAGACAGTTaGAACCCATGGTGGATCCAAAGGTACAGTATCAAAATCATGGAA +
Preference number: 1 (lower is better)
Translates to: LPEGGSSQTNKTKDS*NPWWIQRYSIKIME
Trigger: TTCCATGATTTTGATACTGTACCTTTGGATCCACCATGGGTTGCAACTGTCTTTGGTTTTGTTTGTTTGACTTGAACCACCCTCTGGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
3UTR-3UTR CCA 90 bp AGGGACGGCAGGCTGCCGTTCACCTGGTCCAGGGCCTCTGACTGCTCCACTTGGGGCAGGGCCGTGCGATaGGGGAAGATGGGAGACGAC +
Preference number: 2 (lower is better)
Translates to: RDGRLPFTWSRASDCSTWGRAVR*GKMGDD
Trigger: GTCGTCTCCCATCTTCCCCCATCGCACGGCCCTGCC...CCAAGTGGAGCAGTCAGAGGCCCTGGACCAGGTGAACGGCAGCCTGCCGTCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR-3UTR GCA 90 bp GGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTGGGCCTGCTGTTTCCTaGAGCTGGGGCCGAGCGCAT +
Preference number: 2 (lower is better)
Translates to: GEADSTAVPIWTMGQGRSGPAVS*SWGRAH
Trigger: ATGCGCTCGGCCCCAGCTGCAGGAAACAGCAGGCCC...AGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
3UTR-3UTR GCA 90 bp AACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTCAGACTCCACAGCAGTaGCCATCTGGACAATGGGGC +
Preference number: 2 (lower is better)
Translates to: NFPLHPAAMPSVGWAWCPQTPQQ*PSGQWG
Trigger: GCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTG...AGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
3UTR-3UTR GCA 90 bp GAAAGTCCGGTAGGAGATGTCGGGCTCGTCTGTGTACCAGGAGCTGCGGTGCAGGGACCTCTTCCTGGCTaGTCTGCCGGCGCAGGCACT +
Preference number: 2 (lower is better)
Translates to: ESPVGDVGLVCVPGAAVQGPLPG*SAGAGT
Trigger: AGTGCCTGCGCCGGCAGAGCAGCCAGGAAGAGGTCC...CTGCACCGCAGCTCCTGGTACACAGACGAGCCCGACATCTCCTACCGGACTTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR-3UTR CCA 90 bp CCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCAGATGCCCATCTGGACAATaGGGCAGGGCAGGTCTGGCC +
Preference number: 2 (lower is better)
Translates to: PPCLQLGGPGALVHGRSRCPSGQ*GRAGLA
Trigger: GGCCAGACCTGCCCTGCCCCATTGTCCAGATGGGCA...TCTGCTTCTCCCATGTACCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
3UTR-3UTR CCA 90 bp CTCGTCTGTGTACCAGGAGCTGCGGTGCAGGGACGGCAGGCTGCCGTTCACCTGTGCGATGGGGGAAGATaGGAGACGACGGGACCTCTT +
Preference number: 2 (lower is better)
Translates to: LVCVPGAAVQGRQAAVHLCDGGR*ETTGPL
Trigger: AAGAGGTCCCGTCGTCTCCCATCTTCCCCCATCGCA...CAGGTGAACGGCAGCCTGCCGTCCCTGCACCGCAGCTCCTGGTACACAGACGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR-3UTR TCA 90 bp AACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGTTGGGCCCAGTGACTaGTATGCTAGACCGATGGCT +
Preference number: 2 (lower is better)
Translates to: NFPLHPAAMPSVGWAWCPVGPSD*YARPMA
Trigger: AGCCATCGGTCTAGCATATCAGTCACTGGGCCCAAC...AGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
3UTR-3UTR TCA 90 bp CGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCAACACTGGACCTTCTCTaGGGCTCCCGGTCATGCTTG +
Preference number: 2 (lower is better)
Translates to: RRHAFSWVGLVPWYMGEATLDLL*GSRSCL
Trigger: CAAGCATGACCGGGAGCCTCAGAGAAGGTCCAGTGT...TGCTTCTCCCATGTACCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR-3UTR GCA 90 bp CCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGAGCGCATGGTACTCTaGCAGGCTCAACCGCTTGGG +
Preference number: 2 (lower is better)
Translates to: PLTFPCTPPPCLQLGGPGERMVL*QAQPLG
Trigger: CCCAAGCGGTTGAGCCTGGCAGAGTACCATGCGCTC...ACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
3UTR-3UTR CCA 90 bp GCGCCGAGGGGCCTGTCAGTCTTTGGGAGTTCGGGCAAACTAGGGATGCAGGACGAGGAGTGCTTTGCTTaGAAGGGGTCTCCCTGGGGC +
Preference number: 2 (lower is better)
Translates to: APRGLSVFGSSGKLGMQDEECFA*KGSPWG
Trigger: GCCCCAGGGAGACCCCTTCCAAGCAAAGCACTCCTC...GTCCTGCATCCCTAGTTTGCCCGAACTCCCAAAGACTGACAGGCCCCTCGGCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
3UTR-3UTR CCA 90 bp ACCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGAAGGAGGATCTCCGGTaGGATGCTGGGGTGGGAGGT +
Preference number: 2 (lower is better)
Translates to: TFNFPLHPAAMPSVGWAWKEDLR*DAGVGG
Trigger: ACCTCCCACCCCAGCATCCCACCGGAGATCCTCCTT...CCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR-3UTR TCA 90 bp GCGCCGAGGGGCCTGTCAGTCTTTGGGAGTTCGGGCAAACTAGGGATGCAGGACGAAAAAGAACCACCGTaGGCAACGTCCGCGACAGGC +
Preference number: 2 (lower is better)
Translates to: APRGLSVFGSSGKLGMQDEKEPP*ATSATG
Trigger: GCCTGTCGCGGACGTTGCTCACGGTGGTTCTTTTTC...GTCCTGCATCCCTAGTTTGCCCGAACTCCCAAAGACTGACAGGCCCCTCGGCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
3UTR-3UTR GCA 90 bp AGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTGGGAGCGCATGGTACTCTaGCAGGCTCAACCGCTTGGG +
Preference number: 2 (lower is better)
Translates to: RSRLHSSAHLDNGAGQVWERMVL*QAQPLG
Trigger: CCCAAGCGGTTGAGCCTGGCAGAGTACCATGCGCTC...CCAGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
3UTR-3UTR CCA 90 bp ACCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGCCAGGCTCAACCGCTTaGGACCTGTTCCTACCAGGT +
Preference number: 2 (lower is better)
Translates to: TFNFPLHPAAMPSVGWAWPGSTA*DLFLPG
Trigger: ACCTGGTAGGAACAGGTCCCAAGCGGTTGAGCCTGG...CCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
3UTR-3UTR CCA 90 bp CCTGGTACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCCTGGGGCCGAGCGCATaGTACTCTGCCAGGCTCAAC +
Preference number: 2 (lower is better)
Translates to: PGTWEKQTPQQCPSGQWGLGPSA*YSARLN
Trigger: GTTGAGCCTGGCAGAGTACCATGCGCTCGGCCCCAG...GCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTACCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
3UTR-3UTR CCA 90 bp GGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTGCTGTTTCCTGCAGCTaGGGCCGAGCGCATGGTACT +
Preference number: 2 (lower is better)
Translates to: GEADSTAVPIWTMGQGRSAVSCS*GRAHGT
Trigger: AGTACCATGCGCTCGGCCCCAGCTGCAGGAAACAGC...AGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
3UTR-3UTR CCA 90 bp ATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGGCTGTTTCCTGCAGCTaGGGCCGAGCGCATGGTACT +
Preference number: 2 (lower is better)
Translates to: MGEADSTAVPIWTMGQGRAVSCS*GRAHGT
Trigger: AGTACCATGCGCTCGGCCCCAGCTGCAGGAAACAGC...CCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
3UTR-3UTR CCA 90 bp GAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTGGCTGTTTCCTGCAGCTaGGGCCGAGCGCATGGTACT +
Preference number: 2 (lower is better)
Translates to: EKQTPQQCPSGQWGRAGLAVSCS*GRAHGT
Trigger: AGTACCATGCGCTCGGCCCCAGCTGCAGGAAACAGC...CAGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
3UTR CAA 90 bp TCATCACCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTaGGGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCAGACTCCAC +
Preference number: 2 (lower is better)
Translates to: SSPLTFPCTPPPCLQ*GGPGALVHGRSRLH
Trigger: GTGGAGTCTGCTTCTCCCATGTACCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGGTGATGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
3UTR-3UTR TCA 90 bp GTGTATCTGAGCTTCCTGGCCTGTCCACTTCTCACTGTATTCTGGACTGGGTCTCCCTGGCTCCGCAGATaGGCCACGGCCCCGCTTCCA +
Preference number: 2 (lower is better)
Translates to: VYLSFLACPLLTVFWTGSPWLRR*ATAPLP
Trigger: TGGAAGCGGGGCCGTGGCTCATCTGCGGAGCCAGGG...AGACCCAGTCCAGAATACAGTGAGAAGTGGACAGGCCAGGAAGCTCAGATACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
3UTR-3UTR TCA 90 bp CCTGGTACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCCTGGTCCAGGGCCTCTaGCTGCTCCACTTGGATCAG +
Preference number: 2 (lower is better)
Translates to: PGTWEKQTPQQCPSGQWGLVQGL*LLHLDQ
Trigger: CTGATCCAAGTGGAGCAGTCAGAGGCCCTGGACCAG...GCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTACCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR-3UTR GCA 90 bp CGACACTCCAATCCTATAGATCACCACGTTGCTCCTCTGTCCCCAGCACCCCTTGGGCCTGCTGTTTCCTaGAGCTGGGGCCGAGCGCAT +
Preference number: 2 (lower is better)
Translates to: RHSNPIDHHVAPLSPAPLGPAVS*SWGRAH
Trigger: ATGCGCTCGGCCCCAGCTGCAGGAAACAGCAGGCCC...AAGGGGTGCTGGGGACAGAGGAGCAACGTGGTGATCTATAGGATTGGAGTGTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
3UTR-3UTR CCA 90 bp CCTGGTACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCACAGCAGTGCCCATCTaGACAATGGGGCAGGGCAGG +
Preference number: 2 (lower is better)
Translates to: PGTWEKQTPQQCPSGQWGTAVPI*TMGQGR
Trigger: CCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGT...GCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTACCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
3UTR CAA 90 bp CTGCAGCTGGGGCCGAGCGCATGGTACTCTGCCAGGCTCAACCGCTaGGGACCTGTTCCTACCAGGTTTATGGCTTTCTTGAGGCATGAC +
Preference number: 2 (lower is better)
Translates to: LQLGPSAWYSARLNR*GPVPTRFMAFLRHD
Trigger: GTCATGCCTCAAGAAAGCCATAAACCTGGTAGGAACAGGTCCCAAGCGGTTGAGCCTGGCAGAGTACCATGCGCTCGGCCCCAGCTGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
3UTR-3UTR TCA 90 bp CTTAAGCAGCACCACCAGTCCCCAGAGGACAAGAGCAGCTATATCTCATCCACCCTCACCCATCCTCTGTaGGAGGGCGGGGCCTGCTGT +
Preference number: 2 (lower is better)
Translates to: LKQHHQSPEDKSSYISSTLTHPL*EGGACC
Trigger: ACAGCAGGCCCCGCCCTCTCACAGAGGATGGGTGAG...GGTGGATGAGATATAGCTGCTCTTGTCCTCTGGGGACTGGTGGTGCTGCTTAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
3UTR-3UTR TCA 90 bp ACCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGCAGTTGCCCTTAGCGTaGCAGTCAGAAACCGACCAT +
Preference number: 2 (lower is better)
Translates to: TFNFPLHPAAMPSVGWAWQLPLA*QSETDH
Trigger: ATGGTCGGTTTCTGACTGTCACGCTAAGGGCAACTG...CCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
3UTR-3UTR TCA 90 bp TCCTGTGGACACGTTAAGATGGAACCTGAGGTGTTGCCTGGATTGGTTTTGGCACCCTGGCTCCGCAGATaGGCCACGGCCCCGCTTCCA +
Preference number: 2 (lower is better)
Translates to: SCGHVKMEPEVLPGLVLAPWLRR*ATAPLP
Trigger: TGGAAGCGGGGCCGTGGCTCATCTGCGGAGCCAGGG...TGCCAAAACCAATCCAGGCAACACCTCAGGTTCCATCTTAACGTGTCCACAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
3UTR-3UTR TCA 90 bp CGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCAAGCATTCCTCACTACTaGAATACTCCTGCTCCCCCA +
Preference number: 2 (lower is better)
Translates to: RRHAFSWVGLVPWYMGEASIPHY*NTPAPP
Trigger: TGGGGGAGCAGGAGTATTTCAGTAGTGAGGAATGCT...TGCTTCTCCCATGTACCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR-3UTR GCA 90 bp TCATCACCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCAGACTCCACAGCAGTaGCCATCTGGACAATGGGGC +
Preference number: 2 (lower is better)
Translates to: SSPLTFPCTPPPCLQLGGQTPQQ*PSGQWG
Trigger: GCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTG...CCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGGTGATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
3UTR-3UTR GCA 90 bp CCTGGTACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCCCTTTAACTTTCCCCTaGACCCCGCCGCCATGCCTT +
Preference number: 2 (lower is better)
Translates to: PGTWEKQTPQQCPSGQWGPLTFP*TPPPCL
Trigger: AAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGG...GCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTACCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
3UTR-3UTR CCA 90 bp TCATCACCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCAGGCTCAACCGCTTaGGACCTGTTCCTACCAGGT +
Preference number: 2 (lower is better)
Translates to: SSPLTFPCTPPPCLQLGGPGSTA*DLFLPG
Trigger: ACCTGGTAGGAACAGGTCCCAAGCGGTTGAGCCTGG...CCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGGTGATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
3UTR-3UTR CCA 90 bp CCTGGTACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCATGCCTTCAGTTGGGTaGGCCTGGTGCCCTGGTACA +
Preference number: 2 (lower is better)
Translates to: PGTWEKQTPQQCPSGQWGMPSVG*AWCPGT
Trigger: TGTACCAGGGCACCAGGCCCACCCAACTGAAGGCAT...GCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTACCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
3UTR-3UTR CCA 90 bp TCCCTTTCACGAAAAAGAACCACCGTGAGCAACGTCCGCGACAGGCAGCCCTGGTGGAAGGGGTCTCCCTaGGGCCTTGGGTCTGCTTTT +
Preference number: 2 (lower is better)
Translates to: SLSRKRTTVSNVRDRQPWWKGSP*GLGSAF
Trigger: AAAAGCAGACCCAAGGCCCCAGGGAGACCCCTTCCA...CCAGGGCTGCCTGTCGCGGACGTTGCTCACGGTGGTTCTTTTTCGTGAAAGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
3UTR-3UTR CCA 90 bp ACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCACAAGGTTCCCAATGCTaGGCCGCTTTCCATGGGCAG +
Preference number: 2 (lower is better)
Translates to: TWEKQTPQQCPSGQWGRAQGSQC*AAFHGQ
Trigger: CTGCCCATGGAAAGCGGCCCAGCATTGGGAACCTTG...TGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR-3UTR CCA 90 bp CCTGGTACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCTTTGCCTGCTCCAGGTaGGCGAGCTGTCATCCTCGT +
Preference number: 2 (lower is better)
Translates to: PGTWEKQTPQQCPSGQWGFACSR*ASCHPR
Trigger: ACGAGGATGACAGCTCGCCCACCTGGAGCAGGCAAA...GCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTACCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR CAA 90 bp TCGGATATCAGGACTGCCTCCACCAAGCTGTCCGCACTCCTCTGCTaGTCGCTGTTTTTGTTCCGGAAGCTGCTGGGGACAGTCAGGCTG +
Preference number: 2 (lower is better)
Translates to: SDIRTASTKLSALLC*SLFLFRKLLGTVRL
Trigger: CAGCCTGACTGTCCCCAGCAGCTTCCGGAACAAAAACAGCGACAAGCAGAGGAGTGCGGACAGCTTGGTGGAGGCAGTCCTGATATCCGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR-3UTR TCA 90 bp CCTCCTCACCCATCCTCTGTGAGAGGGCGGGGCCTGCTGTTTCCTGCAGCTGGGTGCTTGTGGGAAGAATaGTGCCCATTTTCAGACACA +
Preference number: 2 (lower is better)
Translates to: PPHPSSVRGRGLLFPAAGCLWEE*CPFSDT
Trigger: TGTGTCTGAAAATGGGCATCATTCTTCCCACAAGCA...CCCAGCTGCAGGAAACAGCAGGCCCCGCCCTCTCACAGAGGATGGGTGAGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR-3UTR GCA 90 bp AACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTTATCTCATCCACCTATaGATTTCTGCACCAGCGATG +
Preference number: 2 (lower is better)
Translates to: NFPLHPAAMPSVGWAWCPYLIHL*ISAPAM
Trigger: CATCGCTGGTGCAGAAATGCATAGGTGGATGAGATA...AGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
3UTR-3UTR GCA 90 bp CACCAGTCCCCAGAGGACAAGAGCAGCTATATCTCATCCACCTATGCATTTCTGCCGGTAGGGAGGGGTTaGTGGAGGGGTGGCCCACGA +
Preference number: 2 (lower is better)
Translates to: HQSPEDKSSYISSTYAFLPVGRG*WRGGPR
Trigger: TCGTGGGCCACCCCTCCAGCAACCCCTCCCTACCGG...CAGAAATGCATAGGTGGATGAGATATAGCTGCTCTTGTCCTCTGGGGACTGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR-3UTR CCA 90 bp ACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCATGGTGCCCTGGTACATaGGAGAAGCAGACTCCACAG +
Preference number: 2 (lower is better)
Translates to: TWEKQTPQQCPSGQWGRAWCPGT*EKQTPQ
Trigger: CTGTGGAGTCTGCTTCTCCCATGTACCAGGGCACCA...TGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
3UTR-3UTR CCA 90 bp ATGCATATCATTTCATCCGCCAGGTCCTCCTCATCCCTCCCAGGGTCTGGCTCTTCAGTTGGGTGGGCCTaGTGCCCTGGTACATGGGAG +
Preference number: 2 (lower is better)
Translates to: MHIISSARSSSSLPGSGSSVGWA*CPGTWE
Trigger: CTCCCATGTACCAGGGCACCAGGCCCACCCAACTGA...AGAGCCAGACCCTGGGAGGGATGAGGAGGACCTGGCGGATGAAATGATATGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR-3UTR CCA 90 bp CGGTGCAGGGACGGCAGGCTGCCGTTCACCTGGTCCAGGGCCTCTGACTGCTCCAGGACGCAGTGTATTTaGGGGAAAGGGTTTAAAAAT +
Preference number: 2 (lower is better)
Translates to: RCRDGRLPFTWSRASDCSRTQCI*GKGFKN
Trigger: ATTTTTAAACCCTTTCCCCCAAATACACTGCGTCCT...GGAGCAGTCAGAGGCCCTGGACCAGGTGAACGGCAGCCTGCCGTCCCTGCACCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR-3UTR CCA 90 bp TTCTTAAGCAGCACCACCAGTCCCCAGAGGACAAGAGCAGCTATATCTCATCCAGGCCCACATCCCCGTTaGCTCGGGGACGCACGTTCC +
Preference number: 2 (lower is better)
Translates to: FLSSTTSPQRTRAAISHPGPHPR*LGDARS
Trigger: GGAACGTGCGTCCCCGAGCCAACGGGGATGTGGGCC...TGGATGAGATATAGCTGCTCTTGTCCTCTGGGGACTGGTGGTGCTGCTTAAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR-3UTR TCA 90 bp AACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTCGTACAGTCAGAGTGTaGGTGCATTCTAATGAAAAC +
Preference number: 2 (lower is better)
Translates to: NFPLHPAAMPSVGWAWCPRTVRV*VHSNEN
Trigger: GTTTTCATTAGAATGCACTCACACTCTGACTGTACG...AGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
3UTR-3UTR TCA 90 bp CCTGGTACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCGGCCGGCAACTGCCATaGTCTGTTGCTGCATTAGAT +
Preference number: 2 (lower is better)
Translates to: PGTWEKQTPQQCPSGQWGGRQLP*SVAALD
Trigger: ATCTAATGCAGCAACAGATCATGGCAGTTGCCGGCC...GCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTACCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR-3UTR TCA 90 bp CACCAGTCCCCAGAGGACAAGAGCAGCTATATCTCATCCACCTATGCATTTCTGATAGTCCTGCCGGTGTaGGAGGGGGCCCACATCCCC +
Preference number: 2 (lower is better)
Translates to: HQSPEDKSSYISSTYAFLIVLPV*EGAHIP
Trigger: GGGGATGTGGGCCCCCTCTCACACCGGCAGGACTAT...CAGAAATGCATAGGTGGATGAGATATAGCTGCTCTTGTCCTCTGGGGACTGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR-3UTR GCA 90 bp ACCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGGCAGCCAGCTGGACCTaGTCTGTAATTCACTTACTT +
Preference number: 2 (lower is better)
Translates to: TFNFPLHPAAMPSVGWAWAASWT*SVIHLL
Trigger: AAGTAAGTGAATTACAGAGCAGGTCCAGCTGGCTGC...CCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
3UTR-3UTR GCA 90 bp CCTGGTACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCTATAGATCACCACGTTaGTCCTCTGTCCCCAGCACC +
Preference number: 2 (lower is better)
Translates to: PGTWEKQTPQQCPSGQWGYRSPR*SSVPST
Trigger: GGTGCTGGGGACAGAGGAGCAACGTGGTGATCTATA...GCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTACCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
3UTR-3UTR GCA 90 bp AACCGTAACTATGGATACCCAAGGGGCAGAGCAGCCAGCTGGACCTGCTCTGTAGCTCAAGGTTCCCAATaGTGGGCCGCTTTCCATGGG +
Preference number: 2 (lower is better)
Translates to: NRNYGYPRGRAASWTCSVAQGSQ*WAAFHG
Trigger: CCCATGGAAAGCGGCCCAGCATTGGGAACCTTGAGC...TACAGAGCAGGTCCAGCTGGCTGCTCTGCCCCTTGGGTATCCATAGTTACGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR-3UTR GCA 90 bp GGTGATGCATATCATTTCATCCGCCAGGTCCTCCTCATCCCTCCCAGGGTCTGGAAGCAGGGTGCTGGCTaGACTCTCCATCTCGTCGAT +
Preference number: 2 (lower is better)
Translates to: GDAYHFIRQVLLIPPRVWKQGAG*TLHLVD
Trigger: ATCGACGAGATGGAGAGTGCAGCCAGCACCCTGCTT...CCAGACCCTGGGAGGGATGAGGAGGACCTGGCGGATGAAATGATATGCATCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR-3UTR CCA 90 bp GAAATGGCGCTCCCTGCGGCTGGTATTAGGTTACCATTGGCACCGAAGGAACCACCAGGCTCAACCGCTTaGGACCTGTTCCTACCAGGT +
Preference number: 2 (lower is better)
Translates to: EMALPAAGIRLPLAPKEPPGSTA*DLFLPG
Trigger: ACCTGGTAGGAACAGGTCCCAAGCGGTTGAGCCTGG...TGGTTCCTTCGGTGCCAATGGTAACCTAATACCAGCCGCAGGGAGCGCCATTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
3UTR-3UTR TCA 90 bp GAAAGTCCGGTAGGAGATGTCGGGCTCGTCTGTGTACCAGGAGCTGCGGTGCAGCTGGTAGCTGGGTTCTaGCTTACTTACACACCGTAT +
Preference number: 2 (lower is better)
Translates to: ESPVGDVGLVCVPGAAVQLVAGF*LTYTPY
Trigger: ATACGGTGTGTAAGTAAGTCAGAACCCAGCTACCAG...CTGCACCGCAGCTCCTGGTACACAGACGAGCCCGACATCTCCTACCGGACTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR-3UTR GCA 90 bp CCAAGGGGCAGAGCAGCCAGCTGGACCTGCTCTGTAATTCACTTACTTACTTACGTTGGGTGGGCCTGGTaGCCTGGTACATGGGAGAAG +
Preference number: 2 (lower is better)
Translates to: PRGRAASWTCSVIHLLTYVGWAW*PGTWEK
Trigger: CTTCTCCCATGTACCAGGGCACCAGGCCCACCCAAC...GTAAGTAAGTAAGTGAATTACAGAGCAGGTCCAGCTGGCTGCTCTGCCCCTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
3UTR-3UTR GCA 90 bp CGTATTTCAGAACAGCTAAACAGGAACCAGGACGCAGTGTATTTGGGGGAAAGGTGCACCCCGCCGCCATaGCTTCAGTTGGGTGGGCCT +
Preference number: 2 (lower is better)
Translates to: RISEQLNRNQDAVYLGERCTPPP*LQLGGP
Trigger: AGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCA...CCTTTCCCCCAAATACACTGCGTCCTGGTTCCTGTTTAGCTGTTCTGAAATACG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
3UTR-3UTR GCA 90 bp CCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCAGACCATTTTCAGACACATaGTCAAGGTTCCCAATGCTG +
Preference number: 2 (lower is better)
Translates to: PPCLQLGGPGALVHGRSRPFSDT*SRFPML
Trigger: CAGCATTGGGAACCTTGAGCATGTGTCTGAAAATGG...TCTGCTTCTCCCATGTACCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR-3UTR CCA 90 bp CACCAGTCCCCAGAGGACAAGAGCAGCTATATCTCATCCACCTATGCATTTCTGTGCCCATCTGGACAATaGGGCAGGGCAGGTCTGGCC +
Preference number: 2 (lower is better)
Translates to: HQSPEDKSSYISSTYAFLCPSGQ*GRAGLA
Trigger: GGCCAGACCTGCCCTGCCCCATTGTCCAGATGGGCA...CAGAAATGCATAGGTGGATGAGATATAGCTGCTCTTGTCCTCTGGGGACTGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
3UTR-3UTR CCA 90 bp AACCGTAACTATGGATACCCAAGGGGCAGAGCAGCCAGCTGGACCTGCTCTGTAGTCGGAGGCTCTCACTaGCAAATGACAGCTCTGTGC +
Preference number: 2 (lower is better)
Translates to: NRNYGYPRGRAASWTCSVVGGSH*QMTALC
Trigger: GCACAGAGCTGTCATTTGCCAGTGAGAGCCTCCGAC...TACAGAGCAGGTCCAGCTGGCTGCTCTGCCCCTTGGGTATCCATAGTTACGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
3UTR-3UTR CCA 90 bp GGTGATGCATATCATTTCATCCGCCAGGTCCTCCTCATCCCTCCCAGGGTCTGGCTGGGCCGCTTTCCATaGGCAGCTTTGGACATATTG +
Preference number: 2 (lower is better)
Translates to: GDAYHFIRQVLLIPPRVWLGRFP*AALDIL
Trigger: CAATATGTCCAAAGCTGCCCATGGAAAGCGGCCCAG...CCAGACCCTGGGAGGGATGAGGAGGACCTGGCGGATGAAATGATATGCATCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR-3UTR CCA 90 bp TTCTTAAGCAGCACCACCAGTCCCCAGAGGACAAGAGCAGCTATATCTCATCCAGGTGGGATGCTGGGGTaGGAGGTAGTAGGCGTCTCC +
Preference number: 2 (lower is better)
Translates to: FLSSTTSPQRTRAAISHPGGMLG*EVVGVS
Trigger: GGAGACGCCTACTACCTCCCACCCCAGCATCCCACC...TGGATGAGATATAGCTGCTCTTGTCCTCTGGGGACTGGTGGTGCTGCTTAAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR-3UTR TCA 90 bp CGACACTCCAATCCTATAGATCACCACGTTGCTCCTCTGTCCCCAGCACCCCTTCAGTTGCCCTTAGCGTaGCAGTCAGAAACCGACCAT +
Preference number: 2 (lower is better)
Translates to: RHSNPIDHHVAPLSPAPLQLPLA*QSETDH
Trigger: ATGGTCGGTTTCTGACTGTCACGCTAAGGGCAACTG...AAGGGGTGCTGGGGACAGAGGAGCAACGTGGTGATCTATAGGATTGGAGTGTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
3UTR-3UTR TCA 90 bp TTCTTAAGCAGCACCACCAGTCCCCAGAGGACAAGAGCAGCTATATCTCATCCACACGACCGGGTCGAGTaGCTCGGTGAGTACTTCTGG +
Preference number: 2 (lower is better)
Translates to: FLSSTTSPQRTRAAISHPHDRVE*LGEYFW
Trigger: CCAGAAGTACTCACCGAGTCACTCGACCCGGTCGTG...TGGATGAGATATAGCTGCTCTTGTCCTCTGGGGACTGGTGGTGCTGCTTAAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR-3UTR GCA 90 bp AGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTGGTTTATGAGGTCCCATTaGCCTCGCAATAATCACTGG +
Preference number: 2 (lower is better)
Translates to: RSRLHSSAHLDNGAGQVWFMRSH*PRNNHW
Trigger: CCAGTGATTATTGCGAGGGCAATGGGACCTCATAAA...CCAGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
3UTR-3UTR GCA 90 bp TCCTGTGGACACGTTAAGATGGAACCTGAGGTGTTGCCTGGATTGGTTTTGGCATCTCTGTGGGGCAGCTaGCCCCCTCCTTTGCTCTCT +
Preference number: 2 (lower is better)
Translates to: SCGHVKMEPEVLPGLVLASLWGS*PPPLLS
Trigger: AGAGAGCAAAGGAGGGGGGCAGCTGCCCCACAGAGA...TGCCAAAACCAATCCAGGCAACACCTCAGGTTCCATCTTAACGTGTCCACAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
3UTR-3UTR CCA 90 bp TTCTTAAGCAGCACCACCAGTCCCCAGAGGACAAGAGCAGCTATATCTCATCCAACAGCAGTGCCCATCTaGACAATGGGGCAGGGCAGG +
Preference number: 2 (lower is better)
Translates to: FLSSTTSPQRTRAAISHPTAVPI*TMGQGR
Trigger: CCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGT...TGGATGAGATATAGCTGCTCTTGTCCTCTGGGGACTGGTGGTGCTGCTTAAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
3UTR-3UTR CCA 90 bp AGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTGGCTCGGTGAGTACTTCTaGGCTTTACTTGAATCTAGG +
Preference number: 2 (lower is better)
Translates to: RSRLHSSAHLDNGAGQVWLGEYF*ALLESR
Trigger: CCTAGATTCAAGTAAAGCCCAGAAGTACTCACCGAG...CCAGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR-3UTR TCA 90 bp CCTGGTACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGAAAACCTTATTTATaGGGTCCCATTGCCCTCGCA +
Preference number: 2 (lower is better)
Translates to: PGTWEKQTPQQCPSGQWGRKPYL*GPIALA
Trigger: TGCGAGGGCAATGGGACCTCATAAATAAGGTTTTCT...GCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTACCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
3UTR-3UTR GCA 90 bp ACTGACTTTGGAAAAGATCATCGCCTCTATCAGACACTTAGGGTCCTGGTCTGGGTTGGGTGGGCCTGGTaGCCTGGTACATGGGAGAAG +
Preference number: 2 (lower is better)
Translates to: TDFGKDHRLYQTLRVLVWVGWAW*PGTWEK
Trigger: CTTCTCCCATGTACCAGGGCACCAGGCCCACCCAAC...CCAGACCAGGACCCTAAGTGTCTGATAGAGGCGATGATCTTTTCCAAAGTCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
3UTR-3UTR GCA 90 bp ACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCATTTATGAGGTCCCATTaGCCTCGCAATAATCACTGG +
Preference number: 2 (lower is better)
Translates to: TWEKQTPQQCPSGQWGRAFMRSH*PRNNHW
Trigger: CCAGTGATTATTGCGAGGGCAATGGGACCTCATAAA...TGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
3UTR-3UTR GCA 90 bp ACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCATATCTCATCCACCTATaGATTTCTGCACCAGCGATG +
Preference number: 2 (lower is better)
Translates to: TWEKQTPQQCPSGQWGRAYLIHL*ISAPAM
Trigger: CATCGCTGGTGCAGAAATGCATAGGTGGATGAGATA...TGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
3UTR-3UTR CCA 90 bp ACTGGCGTCACATCACAGAAAACCTTATTTATGAGGTCCCATTGCCCTCGCAATTGCCCATCTGGACAATaGGGCAGGGCAGGTCTGGCC +
Preference number: 2 (lower is better)
Translates to: TGVTSQKTLFMRSHCPRNCPSGQ*GRAGLA
Trigger: GGCCAGACCTGCCCTGCCCCATTGTCCAGATGGGCA...ATTGCGAGGGCAATGGGACCTCATAAATAAGGTTTTCTGTGATGTGACGCCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
3UTR-3UTR CCA 90 bp CGTATTTCAGAACAGCTAAACAGGAACCAGGACGCAGTGTATTTGGGGGAAAGGACAGCAGTGCCCATCTaGACAATGGGGCAGGGCAGG +
Preference number: 2 (lower is better)
Translates to: RISEQLNRNQDAVYLGERTAVPI*TMGQGR
Trigger: CCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGT...CCTTTCCCCCAAATACACTGCGTCCTGGTTCCTGTTTAGCTGTTCTGAAATACG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
3UTR-3UTR CCA 90 bp AACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGTATCTAAGTTTACCTaGTTGCGAGTGCATTATTAT +
Preference number: 2 (lower is better)
Translates to: NFPLHPAAMPSVGWAWCPVSKFT*LRVHYY
Trigger: ATAATAATGCACTCGCAACCAGGTAAACTTAGATAC...AGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
3UTR-3UTR CCA 90 bp GGAGGTCATGGCGGACTGGCATACAAAAGGAACTCTGTCAGCTCAGCGCCGAGGTGCAGGACTTTGGAATaGAGTCAGATACCCACCTTA +
Preference number: 2 (lower is better)
Translates to: GGHGGLAYKRNSVSSAPRCRTLE*SQIPTL
Trigger: TAAGGTGGGTATCTGACTCCATTCCAAAGTCCTGCA...CCTCGGCGCTGAGCTGACAGAGTTCCTTTTGTATGCCAGTCCGCCATGACCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
3UTR-3UTR CCA 90 bp CCTGGTACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCATAGCCATGTATCTCTaGGTCTTCCCGGCAAATAGT +
Preference number: 2 (lower is better)
Translates to: PGTWEKQTPQQCPSGQWGIAMYL*VFPANS
Trigger: ACTATTTGCCGGGAAGACCCAGAGATACATGGCTAT...GCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTACCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR-3UTR CCA 90 bp AGACAGTTGCAACCCATGGTGGATCCAAAGGTACAGTATCAAAATCATGGAACTGACGGGACCTCTTCCTaGCTGCTCTGCCGGCGCAGG +
Preference number: 2 (lower is better)
Translates to: RQLQPMVDPKVQYQNHGTDGTSS*LLCRRR
Trigger: CCTGCGCCGGCAGAGCAGCCAGGAAGAGGTCCCGTC...AGTTCCATGATTTTGATACTGTACCTTTGGATCCACCATGGGTTGCAACTGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR-3UTR TCA 90 bp CCTGGTACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCTTCGTGTTTTGTTGCTaGCACAAATTTTGGGTCCCT +
Preference number: 2 (lower is better)
Translates to: PGTWEKQTPQQCPSGQWGFVFCC*HKFWVP
Trigger: AGGGACCCAAAATTTGTGTCAGCAACAAAACACGAA...GCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTACCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR-3UTR GCA 90 bp TATCCAAAAGTGGGTTTTCATCAGGACGTACAGTCAGAGTGTGAGTGCATTCTATGCACCCCGCCGCCATaGCTTCAGTTGGGTGGGCCT +
Preference number: 2 (lower is better)
Translates to: YPKVGFHQDVQSECECILCTPPP*LQLGGP
Trigger: AGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCA...TAGAATGCACTCACACTCTGACTGTACGTCCTGATGAAAACCCACTTTTGGATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
3UTR-3UTR GCA 90 bp CGACACTCCAATCCTATAGATCACCACGTTGCTCCTCTGTCCCCAGCACCCCTTGCAGCCAGCTGGACCTaGTCTGTAATTCACTTACTT +
Preference number: 2 (lower is better)
Translates to: RHSNPIDHHVAPLSPAPLAASWT*SVIHLL
Trigger: AAGTAAGTGAATTACAGAGCAGGTCCAGCTGGCTGC...AAGGGGTGCTGGGGACAGAGGAGCAACGTGGTGATCTATAGGATTGGAGTGTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
3UTR-3UTR GCA 90 bp TTTCCTGTGGACACGTTAAGATGGAACCTGAGGTGTTGCCTGGATTGGTTTTGGTCCGGAGGAGTGCTTTaGTTGGAAGGGGTCTCCCTG +
Preference number: 2 (lower is better)
Translates to: FPVDTLRWNLRCCLDWFWSGGVL*LEGVSL
Trigger: CAGGGAGACCCCTTCCAAGCAAAGCACTCCTCCGGA...CCAAAACCAATCCAGGCAACACCTCAGGTTCCATCTTAACGTGTCCACAGGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
3UTR-3UTR CCA 90 bp ACTGGCGTCACATCACAGAAAACCTTATTTATGAGGTCCCATTGCCCTCGCAATGCTGTTTCCTGCAGCTaGGGCCGAGCGCATGGTACT +
Preference number: 2 (lower is better)
Translates to: TGVTSQKTLFMRSHCPRNAVSCS*GRAHGT
Trigger: AGTACCATGCGCTCGGCCCCAGCTGCAGGAAACAGC...ATTGCGAGGGCAATGGGACCTCATAAATAAGGTTTTCTGTGATGTGACGCCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
3UTR-3UTR CCA 90 bp GACAGTTGCAACCCATGGTGGATCCAAAGGTACAGTATCAAAATCATGGAACTCTGCCCATCTGGACAATaGGGCAGGGCAGGTCTGGCC +
Preference number: 2 (lower is better)
Translates to: DSCNPWWIQRYSIKIMELCPSGQ*GRAGLA
Trigger: GGCCAGACCTGCCCTGCCCCATTGTCCAGATGGGCA...GAGTTCCATGATTTTGATACTGTACCTTTGGATCCACCATGGGTTGCAACTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
3UTR-3UTR CCA 90 bp AGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTGGATAATCACTGGTAGCTaGGTTCTGACTTACTTACAC +
Preference number: 2 (lower is better)
Translates to: RSRLHSSAHLDNGAGQVWIITGS*VLTYLH
Trigger: GTGTAAGTAAGTCAGAACCCAGCTACCAGTGATTAT...CCAGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
3UTR-3UTR CCA 90 bp TTCTTAAGCAGCACCACCAGTCCCCAGAGGACAAGAGCAGCTATATCTCATCCAGGCAGAGCAGCCAGCTaGACCTGCTCTGTAATTCAC +
Preference number: 2 (lower is better)
Translates to: FLSSTTSPQRTRAAISHPGRAAS*TCSVIH
Trigger: GTGAATTACAGAGCAGGTCCAGCTGGCTGCTCTGCC...TGGATGAGATATAGCTGCTCTTGTCCTCTGGGGACTGGTGGTGCTGCTTAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
3UTR-3UTR CCA 90 bp CAGGACTTTGGAATGGAGTCAGATACCCACCTTAGGCAGGTCTGCTTAATCTTTGAGGAGTGCTTTGCTTaGAAGGGGTCTCCCTGGGGC +
Preference number: 2 (lower is better)
Translates to: QDFGMESDTHLRQVCLIFEECFA*KGSPWG
Trigger: GCCCCAGGGAGACCCCTTCCAAGCAAAGCACTCCTC...AAAGATTAAGCAGACCTGCCTAAGGTGGGTATCTGACTCCATTCCAAAGTCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
3UTR-3UTR CCA 90 bp GGTTCCCTGACTCCCAGTGTCCTTGAAACTAGACCACACTGCTTCCAAAGAGGCAGGTGTTGCCTGGATTaGTTTTGGCATGCGGGTGTA +
Preference number: 2 (lower is better)
Translates to: GSLTPSVLETRPHCFQRGRCCLD*FWHAGV
Trigger: TACACCCGCATGCCAAAACCAATCCAGGCAACACCT...GCCTCTTTGGAAGCAGTGTGGTCTAGTTTCAAGGACACTGGGAGTCAGGGAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000645528.2
3UTR-3UTR TCA 90 bp CCTGGTACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCGGTTTATGGCTTTCTTaGGGCATGACATCTCTTATA +
Preference number: 2 (lower is better)
Translates to: PGTWEKQTPQQCPSGQWGGLWLS*GMTSLI
Trigger: TATAAGAGATGTCATGCCTCAAGAAAGCCATAAACC...GCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTACCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
3UTR-3UTR GCA 90 bp GACAGTTGCAACCCATGGTGGATCCAAAGGTACAGTATCAAAATCATGGAACTCGAGCGCATGGTACTCTaGCAGGCTCAACCGCTTGGG +
Preference number: 2 (lower is better)
Translates to: DSCNPWWIQRYSIKIMELERMVL*QAQPLG
Trigger: CCCAAGCGGTTGAGCCTGGCAGAGTACCATGCGCTC...GAGTTCCATGATTTTGATACTGTACCTTTGGATCCACCATGGGTTGCAACTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
3UTR-3UTR GCA 90 bp TGCAACCCATGGTGGATCCAAAGGTACAGTATCAAAATCATGGAACTCTTGCCCCAGACTCCACAGCAGTaGCCATCTGGACAATGGGGC +
Preference number: 2 (lower is better)
Translates to: CNPWWIQRYSIKIMELLPQTPQQ*PSGQWG
Trigger: GCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTG...GGGCAAGAGTTCCATGATTTTGATACTGTACCTTTGGATCCACCATGGGTTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
3UTR-3UTR GCA 90 bp AGGAACCAGGAGGATAAGAATATCCATAATTTCAGAGCTGCCCTGGCACAGTACCCTTTAACTTTCCCCTaGACCCCGCCGCCATGCCTT +
Preference number: 2 (lower is better)
Translates to: RNQEDKNIHNFRAALAQYPLTFP*TPPPCL
Trigger: AAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGG...GTACTGTGCCAGGGCAGCTCTGAAATTATGGATATTCTTATCCTCCTGGTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
3UTR-3UTR GCA 90 bp CGACACTCCAATCCTATAGATCACCACGTTGCTCCTCTGTCCCCAGCACCCCTTTTTATGAGGTCCCATTaGCCTCGCAATAATCACTGG +
Preference number: 2 (lower is better)
Translates to: RHSNPIDHHVAPLSPAPLFMRSH*PRNNHW
Trigger: CCAGTGATTATTGCGAGGGCAATGGGACCTCATAAA...AAGGGGTGCTGGGGACAGAGGAGCAACGTGGTGATCTATAGGATTGGAGTGTCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
3UTR-3UTR GCA 90 bp CAGACACTTAGGGTCCTGGTCTGGCAATTTTGGCCTGATGTGATGCCACAAGACATTGCAGGGAATCCCTaGCAAGGTAACCTGACAGTC +
Preference number: 2 (lower is better)
Translates to: QTLRVLVWQFWPDVMPQDIAGNP*QGNLTV
Trigger: GACTGTCAGGTTACCTTGGCAGGGATTCCCTGCAAT...GTCTTGTGGCATCACATCAGGCCAAAATTGCCAGACCAGGACCCTAAGTGTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
3UTR-3UTR GCA 90 bp TTTCCTGTGGACACGTTAAGATGGAACCTGAGGTGTTGCCTGGATTGGTTTTGGCACCTTCCGGAGGAGTaGTTTGCTTGGAAGGGGTCT +
Preference number: 2 (lower is better)
Translates to: FPVDTLRWNLRCCLDWFWHLPEE*FAWKGS
Trigger: AGACCCCTTCCAAGCAAAGCACTCCTCCGGAAGGTG...CCAAAACCAATCCAGGCAACACCTCAGGTTCCATCTTAACGTGTCCACAGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
3UTR-3UTR GCA 90 bp GTGTCTTGGGCTCAGCATCAGATGTACAGACTCCAACCACCACTTGGAATCAGCGAAACTAGACCACACTaGTTCCAAAGAGGCATCCCC +
Preference number: 2 (lower is better)
Translates to: VSWAQHQMYRLQPPLGISETRPH*FQRGIP
Trigger: GGGGATGCCTCTTTGGAAGCAGTGTGGTCTAGTTTC...GCTGATTCCAAGTGGTGGTTGGAGTCTGTACATCTGATGCTGAGCCCAAGACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636938.1
3UTR-3UTR GCA 90 bp ACTTACTTACTTACCAGAGGGTGGTTCAAGTCAAACAAACAAAACCAAAGACAGGCAGGGACGGCAGGCTaGCGTTCACCTGGTCCAGGG +
Preference number: 2 (lower is better)
Translates to: TYLLTRGWFKSNKQNQRQAGTAG*RSPGPG
Trigger: CCCTGGACCAGGTGAACGGCAGCCTGCCGTCCCTGC...CTGTCTTTGGTTTTGTTTGTTTGACTTGAACCACCCTCTGGTAAGTAAGTAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR-3UTR CCA 90 bp CCTGGTACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCATAATCACTGGTAGCTaGGTTCTGACTTACTTACAC +
Preference number: 2 (lower is better)
Translates to: PGTWEKQTPQQCPSGQWGIITGS*VLTYLH
Trigger: GTGTAAGTAAGTCAGAACCCAGCTACCAGTGATTAT...GCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTACCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
3UTR-3UTR CCA 90 bp TTTCCTGTGGACACGTTAAGATGGAACCTGAGGTGTTGCCTGGATTGGTTTTGGGGGCCTGTCAGTCTTTaGGAGTTCGGGCAAACTAGG +
Preference number: 2 (lower is better)
Translates to: FPVDTLRWNLRCCLDWFWGPVSL*EFGQTR
Trigger: CCTAGTTTGCCCGAACTCCCAAAGACTGACAGGCCC...CCAAAACCAATCCAGGCAACACCTCAGGTTCCATCTTAACGTGTCCACAGGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
3UTR-3UTR CCA 90 bp GTGTTTCCTGTGGACACGTTAAGATGGAACCTGAGGTGTTGCCTGGATTGGTTTGGGCCTGTCAGTCTTTaGGAGTTCGGGCAAACTAGG +
Preference number: 2 (lower is better)
Translates to: VFPVDTLRWNLRCCLDWFGPVSL*EFGQTR
Trigger: CCTAGTTTGCCCGAACTCCCAAAGACTGACAGGCCC...AAACCAATCCAGGCAACACCTCAGGTTCCATCTTAACGTGTCCACAGGAAACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
3UTR CAA 90 bp CATCAGCGATTTCGTGTTTTGTTGCTGACACAAATTTTGGGTCCCTaGCATAGCGTCCCAAGCCTTCGGATATCAGGACTGCCTCCACCA +
Preference number: 2 (lower is better)
Translates to: HQRFRVLLLTQILGP*HSVPSLRISGLPPP
Trigger: TGGTGGAGGCAGTCCTGATATCCGAAGGCTTGGGACGCTATGCAAGGGACCCAAAATTTGTGTCAGCAACAAAACACGAAATCGCTGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR CAA 90 bp GGTCACAGGCATCAGCGATTTCGTGTTTTGTTGCTGACACAAATTTaGGGTCCCTTGCATAGCGTCCCAAGCCTTCGGATATCAGGACTG +
Preference number: 2 (lower is better)
Translates to: GHRHQRFRVLLLTQI*GPLHSVPSLRISGL
Trigger: CAGTCCTGATATCCGAAGGCTTGGGACGCTATGCAAGGGACCCAAAATTTGTGTCAGCAACAAAACACGAAATCGCTGATGCCTGTGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR-3UTR TCA 90 bp AGGAACCAGGAGGATAAGAATATCCATAATTTCAGAGCTGCCCTGGCACAGTACGTTGGGCCCAGTGACTaGTATGCTAGACCGATGGCT +
Preference number: 2 (lower is better)
Translates to: RNQEDKNIHNFRAALAQYVGPSD*YARPMA
Trigger: AGCCATCGGTCTAGCATATCAGTCACTGGGCCCAAC...GTACTGTGCCAGGGCAGCTCTGAAATTATGGATATTCTTATCCTCCTGGTTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
3UTR-3UTR TCA 90 bp ACTGGCGTCACATCACAGAAAACCTTATTTATGAGGTCCCATTGCCCTCGCAATGTTGGGCCCAGTGACTaGTATGCTAGACCGATGGCT +
Preference number: 2 (lower is better)
Translates to: TGVTSQKTLFMRSHCPRNVGPSD*YARPMA
Trigger: AGCCATCGGTCTAGCATATCAGTCACTGGGCCCAAC...ATTGCGAGGGCAATGGGACCTCATAAATAAGGTTTTCTGTGATGTGACGCCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
3UTR-3UTR TCA 90 bp ATACCCAAGGGGCAGAGCAGCCAGCTGGACCTGCTCTGTAATTCACTTACTTACCTGGTAGCTGGGTTCTaGCTTACTTACACACCGTAT +
Preference number: 2 (lower is better)
Translates to: IPKGQSSQLDLLCNSLTYLVAGF*LTYTPY
Trigger: ATACGGTGTGTAAGTAAGTCAGAACCCAGCTACCAG...GTAAGTAAGTGAATTACAGAGCAGGTCCAGCTGGCTGCTCTGCCCCTTGGGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
3UTR-3UTR TCA 90 bp GGAGGTCATGGCGGACTGGCATACAAAAGGAACTCTGTCAGCTCAGCGCCGAGGTTCCTGCATTTCTTCTaGAATGCTGTTTCAGTAGAA +
Preference number: 2 (lower is better)
Translates to: GGHGGLAYKRNSVSSAPRFLHFF*NAVSVE
Trigger: TTCTACTGAAACAGCATTTCAGAAGAAATGCAGGAA...CCTCGGCGCTGAGCTGACAGAGTTCCTTTTGTATGCCAGTCCGCCATGACCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
3UTR-3UTR TCA 90 bp GACAGTTGCAACCCATGGTGGATCCAAAGGTACAGTATCAAAATCATGGAACTCCCATCTCGTCGATGGTaGGGTCACAGGCATCAGCGA +
Preference number: 2 (lower is better)
Translates to: DSCNPWWIQRYSIKIMELPSRRW*GHRHQR
Trigger: TCGCTGATGCCTGTGACCTCACCATCGACGAGATGG...GAGTTCCATGATTTTGATACTGTACCTTTGGATCCACCATGGGTTGCAACTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR-3UTR GCA 90 bp GTGTCTTGGGCTCAGCATCAGATGTACAGACTCCAACCACCACTTGGAATCAGCTGGAACCTGAGGTGTTaGCTGGATTGGTTTTGGCAT +
Preference number: 2 (lower is better)
Translates to: VSWAQHQMYRLQPPLGISWNLRC*LDWFWH
Trigger: ATGCCAAAACCAATCCAGGCAACACCTCAGGTTCCA...GCTGATTCCAAGTGGTGGTTGGAGTCTGTACATCTGATGCTGAGCCCAAGACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636938.1
3UTR-3UTR GCA 90 bp AGTGGGGAACTACAATTATTAGGACCCATGGATATTGCTGCAGTTCAAATACAAAGGCCAGAGCCAGTCTaGCCCTCGCTGGGGGCTACA +
Preference number: 2 (lower is better)
Translates to: SGELQLLGPMDIAAVQIQRPEPV*PSLGAT
Trigger: TGTAGCCCCCAGCGAGGGGCAGACTGGCTCTGGCCT...TTGTATTTGAACTGCAGCAATATCCATGGGTCCTAATAATTGTAGTTCCCCACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR-3UTR CCA 90 bp TGCAACCCATGGTGGATCCAAAGGTACAGTATCAAAATCATGGAACTCTTGCCCTGGTGCCCTGGTACATaGGAGAAGCAGACTCCACAG +
Preference number: 2 (lower is better)
Translates to: CNPWWIQRYSIKIMELLPWCPGT*EKQTPQ
Trigger: CTGTGGAGTCTGCTTCTCCCATGTACCAGGGCACCA...GGGCAAGAGTTCCATGATTTTGATACTGTACCTTTGGATCCACCATGGGTTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
3UTR-3UTR CCA 90 bp AGACAGTTGCAACCCATGGTGGATCCAAAGGTACAGTATCAAAATCATGGAACTTCAGTTGGGTGGGCCTaGTGCCCTGGTACATGGGAG +
Preference number: 2 (lower is better)
Translates to: RQLQPMVDPKVQYQNHGTSVGWA*CPGTWE
Trigger: CTCCCATGTACCAGGGCACCAGGCCCACCCAACTGA...AGTTCCATGATTTTGATACTGTACCTTTGGATCCACCATGGGTTGCAACTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
3UTR-3UTR CCA 90 bp ATGTCAGGAAAGAGTCATTTACAAACCTTGAAGTGTTTTTGCCTGGATCAGAGTCGCCATGCCTTCAGTTaGGTGGGCCTGGTGCCCTGG +
Preference number: 2 (lower is better)
Translates to: MSGKSHLQTLKCFCLDQSRHAFS*VGLVPW
Trigger: CCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCG...ACTCTGATCCAGGCAAAAACACTTCAAGGTTTGTAAATGACTCTTTCCTGACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
3UTR CAA 90 bp GGGTGTCTTGGGCTCAGCATCAGATGTACAGACTCCAACCACCACTaGGAATCAGCTGAGAATTCAAGATCAGACACCCTTATCGACCAA +
Preference number: 2 (lower is better)
Translates to: GCLGLSIRCTDSNHH*ESAENSRSDTLIDQ
Trigger: TTGGTCGATAAGGGTGTCTGATCTTGAATTCTCAGCTGATTCCAAGTGGTGGTTGGAGTCTGTACATCTGATGCTGAGCCCAAGACACCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636938.1
3UTR CAA 90 bp ACATGCTCAAGGTTCCCAATGCTGGGCCGCTTTCCATGGGCAGCTTaGGACATATTGGCATTATTGAGATTGGCATTTGTTGAGGTGGGA +
Preference number: 2 (lower is better)
Translates to: TCSRFPMLGRFPWAA*DILALLRLAFVEVG
Trigger: TCCCACCTCAACAAATGCCAATCTCAATAATGCCAATATGTCCAAAGCTGCCCATGGAAAGCGGCCCAGCATTGGGAACCTTGAGCATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR-3UTR TCA 90 bp TGTAATTCACTTACTTACTTACCAGAGGGTGGTTCAAGTCAAACAAACAAAACCCTCACCCATCCTCTGTaGGAGGGCGGGGCCTGCTGT +
Preference number: 2 (lower is better)
Translates to: CNSLTYLPEGGSSQTNKTLTHPL*EGGACC
Trigger: ACAGCAGGCCCCGCCCTCTCACAGAGGATGGGTGAG...GGTTTTGTTTGTTTGACTTGAACCACCCTCTGGTAAGTAAGTAAGTGAATTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
3UTR-3UTR TCA 90 bp TGCAACCCATGGTGGATCCAAAGGTACAGTATCAAAATCATGGAACTCTTGCCCAGCAGTGGGGGTCCCTaGAATAGCCATGTATCTCTG +
Preference number: 2 (lower is better)
Translates to: CNPWWIQRYSIKIMELLPSSGGP*NSHVSL
Trigger: CAGAGATACATGGCTATTTCAGGGACCCCCACTGCT...GGGCAAGAGTTCCATGATTTTGATACTGTACCTTTGGATCCACCATGGGTTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR-3UTR GCA 90 bp ATTCAAGATCAGACACCCTTATCGACCAACATCTTGGGCAAAAATCTGCTATTCTCTCTGTGGGGCAGCTaGCCCCCTCCTTTGCTCTCT +
Preference number: 2 (lower is better)
Translates to: IQDQTPLSTNILGKNLLFSLWGS*PPPLLS
Trigger: AGAGAGCAAAGGAGGGGGGCAGCTGCCCCACAGAGA...GAATAGCAGATTTTTGCCCAAGATGTTGGTCGATAAGGGTGTCTGATCTTGAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000636938.1
3UTR-3UTR CCA 90 bp AGACAGTTGCAACCCATGGTGGATCCAAAGGTACAGTATCAAAATCATGGAACTCCAGGCTCAACCGCTTaGGACCTGTTCCTACCAGGT +
Preference number: 2 (lower is better)
Translates to: RQLQPMVDPKVQYQNHGTPGSTA*DLFLPG
Trigger: ACCTGGTAGGAACAGGTCCCAAGCGGTTGAGCCTGG...AGTTCCATGATTTTGATACTGTACCTTTGGATCCACCATGGGTTGCAACTGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
3UTR CAA 90 bp AGGTTCCCAATGCTGGGCCGCTTTCCATGGGCAGCTTTGGACATATaGGCATTATTGAGATTGGCATTTGTTGAGGTGGGAACTTGCTTT +
Preference number: 2 (lower is better)
Translates to: RFPMLGRFPWAALDI*ALLRLAFVEVGTCF
Trigger: AAAGCAAGTTCCCACCTCAACAAATGCCAATCTCAATAATGCCAATATGTCCAAAGCTGCCCATGGAAAGCGGCCCAGCATTGGGAACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR-3UTR GCA 90 bp CCAAGGGGCAGAGCAGCCAGCTGGACCTGCTCTGTAATTCACTTACTTACTTACAAAACCAAAGACAGTTaGAACCCATGGTGGATCCAA +
Preference number: 2 (lower is better)
Translates to: PRGRAASWTCSVIHLLTYKTKDS*NPWWIQ
Trigger: TTGGATCCACCATGGGTTGCAACTGTCTTTGGTTTT...GTAAGTAAGTAAGTGAATTACAGAGCAGGTCCAGCTGGCTGCTCTGCCCCTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
3UTR-3UTR GCA 90 bp ATACCCAAGGGGCAGAGCAGCCAGCTGGACCTGCTCTGTAATTCACTTACTTACATCTATCTTTTTGATTaGAGGGAATCCCTGCCAAGG +
Preference number: 2 (lower is better)
Translates to: IPKGQSSQLDLLCNSLTYIYLFD*RESLPR
Trigger: CCTTGGCAGGGATTCCCTGCAATCAAAAAGATAGAT...GTAAGTAAGTGAATTACAGAGCAGGTCCAGCTGGCTGCTCTGCCCCTTGGGTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
3UTR-3UTR CCA 90 bp AAACCGACCATCGGAGTGATATTCTCTTATGTAAACTGGCGTCACATCACAGAATGGTGCCCTGGTACATaGGAGAAGCAGACTCCACAG +
Preference number: 2 (lower is better)
Translates to: KPTIGVIFSYVNWRHITEWCPGT*EKQTPQ
Trigger: CTGTGGAGTCTGCTTCTCCCATGTACCAGGGCACCA...TTCTGTGATGTGACGCCAGTTTACATAAGAGAATATCACTCCGATGGTCGGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
3UTR-3UTR CCA 90 bp CTTAAGCAGCACCACCAGTCCCCAGAGGACAAGAGCAGCTATATCTCATCCACCAGGACGCAGTGTATTTaGGGGAAAGGGTTTAAAAAT +
Preference number: 2 (lower is better)
Translates to: LKQHHQSPEDKSSYISSTRTQCI*GKGFKN
Trigger: ATTTTTAAACCCTTTCCCCCAAATACACTGCGTCCT...GGTGGATGAGATATAGCTGCTCTTGTCCTCTGGGGACTGGTGGTGCTGCTTAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
3UTR CAA 90 bp GCAGGGAATCCCTGCCAAGGTAACCTGACAGTCGGCCTAATTCTGTaGACAGAAAATGAAGCCTTGACGGTTCTAATTATCCAAAAGTGG +
Preference number: 2 (lower is better)
Translates to: AGNPCQGNLTVGLIL*TENEALTVLIIQKW
Trigger: CCACTTTTGGATAATTAGAACCGTCAAGGCTTCATTTTCTGTCAACAGAATTAGGCCGACTGTCAGGTTACCTTGGCAGGGATTCCCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
3UTR-3UTR TCA 90 bp CCAAGGGGCAGAGCAGCCAGCTGGACCTGCTCTGTAATTCACTTACTTACTTACGGTTTATGGCTTTCTTaGGGCATGACATCTCTTATA +
Preference number: 2 (lower is better)
Translates to: PRGRAASWTCSVIHLLTYGLWLS*GMTSLI
Trigger: TATAAGAGATGTCATGCCTCAAGAAAGCCATAAACC...GTAAGTAAGTAAGTGAATTACAGAGCAGGTCCAGCTGGCTGCTCTGCCCCTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
3UTR-3UTR TCA 90 bp AGACAGTTGCAACCCATGGTGGATCCAAAGGTACAGTATCAAAATCATGGAACTCTGGCAATTTTGGCCTaGTGTGATGCCACAAGACCC +
Preference number: 2 (lower is better)
Translates to: RQLQPMVDPKVQYQNHGTLAILA*CDATRP
Trigger: GGGTCTTGTGGCATCACATCAGGCCAAAATTGCCAG...AGTTCCATGATTTTGATACTGTACCTTTGGATCCACCATGGGTTGCAACTGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
3UTR-3UTR TCA 90 bp GGTTCCCTGACTCCCAGTGTCCTTGAAACTAGACCACACTGCTTCCAAAGAGGCTTCCTGCATTTCTTCTaGAATGCTGTTTCAGTAGAA +
Preference number: 2 (lower is better)
Translates to: GSLTPSVLETRPHCFQRGFLHFF*NAVSVE
Trigger: TTCTACTGAAACAGCATTTCAGAAGAAATGCAGGAA...GCCTCTTTGGAAGCAGTGTGGTCTAGTTTCAAGGACACTGGGAGTCAGGGAACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000645528.2
3UTR-3UTR GCA 90 bp CTTAAGCAGCACCACCAGTCCCCAGAGGACAAGAGCAGCTATATCTCATCCACCCTAAGTTTACCTGGTTaGGAGTGCATTATTATTCCA +
Preference number: 2 (lower is better)
Translates to: LKQHHQSPEDKSSYISSTLSLPG*ECIIIP
Trigger: TGGAATAATAATGCACTCGCAACCAGGTAAACTTAG...GGTGGATGAGATATAGCTGCTCTTGTCCTCTGGGGACTGGTGGTGCTGCTTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
3UTR-3UTR GCA 90 bp CTTAAGCAGCACCACCAGTCCCCAGAGGACAAGAGCAGCTATATCTCATCCACCACCCATGGATATTGCTaGAGTTCAAATACAATACAG +
Preference number: 2 (lower is better)
Translates to: LKQHHQSPEDKSSYISSTTHGYC*SSNTIQ
Trigger: CTGTATTGTATTTGAACTGCAGCAATATCCATGGGT...GGTGGATGAGATATAGCTGCTCTTGTCCTCTGGGGACTGGTGGTGCTGCTTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
3UTR-3UTR GCA 90 bp TTTGGGTGTGGTGGTGTTTCCTGTGGACACGTTAAGATGGAACCTGAGGTGTTGCTTTCTCTGAGTCTCTaGTTGGAAGGGAAAACTGTT +
Preference number: 2 (lower is better)
Translates to: FGCGGVSCGHVKMEPEVLLSLSL*LEGKTV
Trigger: AACAGTTTTCCCTTCCAAGCAGAGACTCAGAGAAAG...CAACACCTCAGGTTCCATCTTAACGTGTCCACAGGAAACACCACCACACCCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000645528.2
3UTR-3UTR GCA 90 bp ATCATGGAACTCTTGCCCAAAGAAAAGACTGCAAATAGTCATCTGGTATATCTTTCTTCCTGGCTGCTCTaGCGGCGCAGGCACTCAAAG +
Preference number: 2 (lower is better)
Translates to: IMELLPKEKTANSHLVYLSSWLL*RRRHSK
Trigger: CTTTGAGTGCCTGCGCCGGCAGAGCAGCCAGGAAGA...AAGATATACCAGATGACTATTTGCAGTCTTTTCTTTGGGCAAGAGTTCCATGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR-3UTR CCA 90 bp ATGTCAGGAAAGAGTCATTTACAAACCTTGAAGTGTTTTTGCCTGGATCAGAGTATGCCTTCAGTTGGGTaGGCCTGGTGCCCTGGTACA +
Preference number: 2 (lower is better)
Translates to: MSGKSHLQTLKCFCLDQSMPSVG*AWCPGT
Trigger: TGTACCAGGGCACCAGGCCCACCCAACTGAAGGCAT...ACTCTGATCCAGGCAAAAACACTTCAAGGTTTGTAAATGACTCTTTCCTGACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
3UTR-3UTR CCA 90 bp TACGTTCAAAGTGCTTTACAATCACTTAGCTATTCCTCACAACAGCCCTGTGAGACGCTCAGGAGGTCATaGCGGACTGGCATACAAAAG +
Preference number: 2 (lower is better)
Translates to: YVQSALQSLSYSSQQPCETLRRS*RTGIQK
Trigger: CTTTTGTATGCCAGTCCGCCATGACCTCCTGAGCGT...CTCACAGGGCTGTTGTGAGGAATAGCTAAGTGATTGTAAAGCACTTTGAACGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000645528.2
3UTR-3UTR CCA 90 bp TGTAATTCACTTACTTACTTACCAGAGGGTGGTTCAAGTCAAACAAACAAAACCTGTTCCGGAAGCTGCTaGGGACAGTCAGGCTGGCTG +
Preference number: 2 (lower is better)
Translates to: CNSLTYLPEGGSSQTNKTCSGSC*GQSGWL
Trigger: CAGCCAGCCTGACTGTCCCCAGCAGCTTCCGGAACA...GGTTTTGTTTGTTTGACTTGAACCACCCTCTGGTAAGTAAGTAAGTGAATTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR-3UTR TCA 90 bp GACAGTTGCAACCCATGGTGGATCCAAAGGTACAGTATCAAAATCATGGAACTCCTGGTAGCTGGGTTCTaGCTTACTTACACACCGTAT +
Preference number: 2 (lower is better)
Translates to: DSCNPWWIQRYSIKIMELLVAGF*LTYTPY
Trigger: ATACGGTGTGTAAGTAAGTCAGAACCCAGCTACCAG...GAGTTCCATGATTTTGATACTGTACCTTTGGATCCACCATGGGTTGCAACTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
3UTR-3UTR TCA 90 bp ACTGACTTTGGAAAAGATCATCGCCTCTATCAGACACTTAGGGTCCTGGTCTGGCGTACAGTCAGAGTGTaGGTGCATTCTAATGAAAAC +
Preference number: 2 (lower is better)
Translates to: TDFGKDHRLYQTLRVLVWRTVRV*VHSNEN
Trigger: GTTTTCATTAGAATGCACTCACACTCTGACTGTACG...CCAGACCAGGACCCTAAGTGTCTGATAGAGGCGATGATCTTTTCCAAAGTCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
3UTR-3UTR TCA 90 bp AGGTTTGGGTGTGGTGGTGTTTCCTGTGGACACGTTAAGATGGAACCTGAGGTGTTCCTGCATTTCTTCTaGAATGCTGTTTCAGTAGAA +
Preference number: 2 (lower is better)
Translates to: RFGCGGVSCGHVKMEPEVFLHFF*NAVSVE
Trigger: TTCTACTGAAACAGCATTTCAGAAGAAATGCAGGAA...CACCTCAGGTTCCATCTTAACGTGTCCACAGGAAACACCACCACACCCAAACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000645528.2
3UTR-3UTR TCA 90 bp TACGTTCAAAGTGCTTTACAATCACTTAGCTATTCCTCACAACAGCCCTGTGAGACAGATGGGGGAAACTaGGGCACAGAGAGGTTAAGT +
Preference number: 2 (lower is better)
Translates to: YVQSALQSLSYSSQQPCETDGGN*GTERLS
Trigger: ACTTAACCTCTCTGTGCCTCAGTTTCCCCCATCTGT...CTCACAGGGCTGTTGTGAGGAATAGCTAAGTGATTGTAAAGCACTTTGAACGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000645528.2
3UTR-3UTR GCA 90 bp ATACCCAAGGGGCAGAGCAGCCAGCTGGACCTGCTCTGTAATTCACTTACTTACCTAAGTTTACCTGGTTaGGAGTGCATTATTATTCCA +
Preference number: 2 (lower is better)
Translates to: IPKGQSSQLDLLCNSLTYLSLPG*ECIIIP
Trigger: TGGAATAATAATGCACTCGCAACCAGGTAAACTTAG...GTAAGTAAGTGAATTACAGAGCAGGTCCAGCTGGCTGCTCTGCCCCTTGGGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
3UTR-3UTR CCA 90 bp ACTTACTTACTTACCAGAGGGTGGTTCAAGTCAAACAAACAAAACCAAAGACAGTGGTGCCCTGGTACATaGGAGAAGCAGACTCCACAG +
Preference number: 2 (lower is better)
Translates to: TYLLTRGWFKSNKQNQRQWCPGT*EKQTPQ
Trigger: CTGTGGAGTCTGCTTCTCCCATGTACCAGGGCACCA...CTGTCTTTGGTTTTGTTTGTTTGACTTGAACCACCCTCTGGTAAGTAAGTAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
3UTR-3UTR CCA 90 bp TTAAGATGTGAAAATGCAACCTGCAGGGTTACCTCTGTTGACATCTTTGTGCATCACTGTATTCTGGACTaGGTCTCTGCAGAGAGCAGG +
Preference number: 2 (lower is better)
Translates to: LRCENATCRVTSVDIFVHHCILD*VSAESR
Trigger: CCTGCTCTCTGCAGAGACCCAGTCCAGAATACAGTG...ATGCACAAAGATGTCAACAGAGGTAACCCTGCAGGTTGCATTTTCACATCTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636938.1
3UTR-3UTR TCA 90 bp ATCATGGAACTCTTGCCCAAAGAAAAGACTGCAAATAGTCATCTGGTATATCTTGTTGGGCCCAGTGACTaGTATGCTAGACCGATGGCT +
Preference number: 2 (lower is better)
Translates to: IMELLPKEKTANSHLVYLVGPSD*YARPMA
Trigger: AGCCATCGGTCTAGCATATCAGTCACTGGGCCCAAC...AAGATATACCAGATGACTATTTGCAGTCTTTTCTTTGGGCAAGAGTTCCATGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
3UTR-3UTR TCA 90 bp ACTTACTTACTTACCAGAGGGTGGTTCAAGTCAAACAAACAAAACCAAAGACAGCAGTTGCCCTTAGCGTaGCAGTCAGAAACCGACCAT +
Preference number: 2 (lower is better)
Translates to: TYLLTRGWFKSNKQNQRQQLPLA*QSETDH
Trigger: ATGGTCGGTTTCTGACTGTCACGCTAAGGGCAACTG...CTGTCTTTGGTTTTGTTTGTTTGACTTGAACCACCCTCTGGTAAGTAAGTAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
3UTR-3UTR TCA 90 bp AGTGGGGAACTACAATTATTAGGACCCATGGATATTGCTGCAGTTCAAATACAAGGTCGAGTGACTCGGTaGGTACTTCTGGGCTTTACT +
Preference number: 2 (lower is better)
Translates to: SGELQLLGPMDIAAVQIQGRVTR*VLLGFT
Trigger: AGTAAAGCCCAGAAGTACTCACCGAGTCACTCGACC...TTGTATTTGAACTGCAGCAATATCCATGGGTCCTAATAATTGTAGTTCCCCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR-3UTR GCA 90 bp AACAAACTAGTGTATCTAAGTTTACCTGGTTGCGAGTGCATTATTATTCCAGTTCAGACTCCACAGCAGTaGCCATCTGGACAATGGGGC +
Preference number: 2 (lower is better)
Translates to: NKLVYLSLPGCECIIIPVQTPQQ*PSGQWG
Trigger: GCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTG...AACTGGAATAATAATGCACTCGCAACCAGGTAAACTTAGATACACTAGTTTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
3UTR-3UTR GCA 90 bp AGGAACCAGGAGGATAAGAATATCCATAATTTCAGAGCTGCCCTGGCACAGTACAAAACCAAAGACAGTTaGAACCCATGGTGGATCCAA +
Preference number: 2 (lower is better)
Translates to: RNQEDKNIHNFRAALAQYKTKDS*NPWWIQ
Trigger: TTGGATCCACCATGGGTTGCAACTGTCTTTGGTTTT...GTACTGTGCCAGGGCAGCTCTGAAATTATGGATATTCTTATCCTCCTGGTTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
3UTR-3UTR GCA 90 bp ACTGGCGTCACATCACAGAAAACCTTATTTATGAGGTCCCATTGCCCTCGCAATTTCTGCCTGGGTATCTaGTGTAGTAGCCATAGTTTT +
Preference number: 2 (lower is better)
Translates to: TGVTSQKTLFMRSHCPRNFCLGI*CSSHSF
Trigger: AAAACTATGGCTACTACAGCAGATACCCAGGCAGAA...ATTGCGAGGGCAATGGGACCTCATAAATAAGGTTTTCTGTGATGTGACGCCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR-3UTR CCA 90 bp ATACCCAAGGGGCAGAGCAGCCAGCTGGACCTGCTCTGTAATTCACTTACTTACCTGCAAATAGTCATCTaGTATATCTTGTGGAAAGAT +
Preference number: 2 (lower is better)
Translates to: IPKGQSSQLDLLCNSLTYLQIVI*YILWKD
Trigger: ATCTTTCCACAAGATATACCAGATGACTATTTGCAG...GTAAGTAAGTGAATTACAGAGCAGGTCCAGCTGGCTGCTCTGCCCCTTGGGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
3UTR-3UTR CCA 90 bp TCTAATTATCCAAAAGTGGGTTTTCATCAGGACGTACAGTCAGAGTGTGAGTGCGACAGTTGCAACCCATaGTGGATCCAAAGGTACAGT +
Preference number: 2 (lower is better)
Translates to: SNYPKVGFHQDVQSECECDSCNP*WIQRYS
Trigger: ACTGTACCTTTGGATCCACCATGGGTTGCAACTGTC...GCACTCACACTCTGACTGTACGTCCTGATGAAAACCCACTTTTGGATAATTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
3UTR-3UTR CCA 90 bp TACGTTCAAAGTGCTTTACAATCACTTAGCTATTCCTCACAACAGCCCTGTGAGCTTCTCACTGTATTCTaGACTGGGTCTCTGCAGAGA +
Preference number: 2 (lower is better)
Translates to: YVQSALQSLSYSSQQPCELLTVF*TGSLQR
Trigger: TCTCTGCAGAGACCCAGTCCAGAATACAGTGAGAAG...CTCACAGGGCTGTTGTGAGGAATAGCTAAGTGATTGTAAAGCACTTTGAACGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000645528.2
3UTR-3UTR CCA 90 bp ATCATGGAACTCTTGCCCAAAGAAAAGACTGCAAATAGTCATCTGGTATATCTTGACAGTCAGGCTGGCTaGTGTGAAAGTCCGGTAGGA +
Preference number: 2 (lower is better)
Translates to: IMELLPKEKTANSHLVYLDSQAG*CESPVG
Trigger: TCCTACCGGACTTTCACACCAGCCAGCCTGACTGTC...AAGATATACCAGATGACTATTTGCAGTCTTTTCTTTGGGCAAGAGTTCCATGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR-3UTR TCA 90 bp TATCCAAAAGTGGGTTTTCATCAGGACGTACAGTCAGAGTGTGAGTGCATTCTAAGAAAACCTTATTTATaGGGTCCCATTGCCCTCGCA +
Preference number: 2 (lower is better)
Translates to: YPKVGFHQDVQSECECILRKPYL*GPIALA
Trigger: TGCGAGGGCAATGGGACCTCATAAATAAGGTTTTCT...TAGAATGCACTCACACTCTGACTGTACGTCCTGATGAAAACCCACTTTTGGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
3UTR-3UTR TCA 90 bp AGGAACCAGGAGGATAAGAATATCCATAATTTCAGAGCTGCCCTGGCACAGTACGTCATTTACAAACCTTaGAGTGTTTTTGCCTGGATC +
Preference number: 2 (lower is better)
Translates to: RNQEDKNIHNFRAALAQYVIYKP*SVFAWI
Trigger: GATCCAGGCAAAAACACTTCAAGGTTTGTAAATGAC...GTACTGTGCCAGGGCAGCTCTGAAATTATGGATATTCTTATCCTCCTGGTTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
3UTR-3UTR TCA 90 bp ACTTACTTACTTACCAGAGGGTGGTTCAAGTCAAACAAACAAAACCAAAGACAGGGGGCTACAAGGTGGTaGTGCATATCATTTCATCCG +
Preference number: 2 (lower is better)
Translates to: TYLLTRGWFKSNKQNQRQGATRW*CISFHP
Trigger: CGGATGAAATGATATGCATCACCACCTTGTAGCCCC...CTGTCTTTGGTTTTGTTTGTTTGACTTGAACCACCCTCTGGTAAGTAAGTAAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR-3UTR GCA 90 bp TGCAACCCATGGTGGATCCAAAGGTACAGTATCAAAATCATGGAACTCTTGCCCTTACCTGGTTGCGAGTaGATTATTATTCCAGTTTAC +
Preference number: 2 (lower is better)
Translates to: CNPWWIQRYSIKIMELLPLPGCE*IIIPVY
Trigger: GTAAACTGGAATAATAATGCACTCGCAACCAGGTAA...GGGCAAGAGTTCCATGATTTTGATACTGTACCTTTGGATCCACCATGGGTTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
3UTR-3UTR GCA 90 bp TGCAACCCATGGTGGATCCAAAGGTACAGTATCAAAATCATGGAACTCTTGCCCAGGACCCATGGATATTaGTGCAGTTCAAATACAATA +
Preference number: 2 (lower is better)
Translates to: CNPWWIQRYSIKIMELLPRTHGY*CSSNTI
Trigger: TATTGTATTTGAACTGCAGCAATATCCATGGGTCCT...GGGCAAGAGTTCCATGATTTTGATACTGTACCTTTGGATCCACCATGGGTTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
3UTR-3UTR CCA 90 bp GACAGTTGCAACCCATGGTGGATCCAAAGGTACAGTATCAAAATCATGGAACTCAGGACGCAGTGTATTTaGGGGAAAGGGTTTAAAAAT +
Preference number: 2 (lower is better)
Translates to: DSCNPWWIQRYSIKIMELRTQCI*GKGFKN
Trigger: ATTTTTAAACCCTTTCCCCCAAATACACTGCGTCCT...GAGTTCCATGATTTTGATACTGTACCTTTGGATCCACCATGGGTTGCAACTGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
3UTR-3UTR TCA 90 bp ACTTACTTACTTACCAGAGGGTGGTTCAAGTCAAACAAACAAAACCAAAGACAGAGAAAACCTTATTTATaGGGTCCCATTGCCCTCGCA +
Preference number: 2 (lower is better)
Translates to: TYLLTRGWFKSNKQNQRQRKPYL*GPIALA
Trigger: TGCGAGGGCAATGGGACCTCATAAATAAGGTTTTCT...CTGTCTTTGGTTTTGTTTGTTTGACTTGAACCACCCTCTGGTAAGTAAGTAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
3UTR-3UTR GCA 90 bp GACAGTTGCAACCCATGGTGGATCCAAAGGTACAGTATCAAAATCATGGAACTCAGGACCCATGGATATTaGTGCAGTTCAAATACAATA +
Preference number: 2 (lower is better)
Translates to: DSCNPWWIQRYSIKIMELRTHGY*CSSNTI
Trigger: TATTGTATTTGAACTGCAGCAATATCCATGGGTCCT...GAGTTCCATGATTTTGATACTGTACCTTTGGATCCACCATGGGTTGCAACTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
3UTR-3UTR GCA 90 bp AACAAACTAGTGTATCTAAGTTTACCTGGTTGCGAGTGCATTATTATTCCAGTTGCCATGATCTGTTGCTaGATTAGATGCAGAGGCAGG +
Preference number: 2 (lower is better)
Translates to: NKLVYLSLPGCECIIIPVAMICC*IRCRGR
Trigger: CCTGCCTCTGCATCTAATGCAGCAACAGATCATGGC...AACTGGAATAATAATGCACTCGCAACCAGGTAAACTTAGATACACTAGTTTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR-3UTR GCA 90 bp ATCATGGAACTCTTGCCCAAAGAAAAGACTGCAAATAGTCATCTGGTATATCTTAAATTTTGGGTCCCTTaGATAGCGTCCCAAGCCTTC +
Preference number: 2 (lower is better)
Translates to: IMELLPKEKTANSHLVYLKFWVP*IASQAF
Trigger: GAAGGCTTGGGACGCTATGCAAGGGACCCAAAATTT...AAGATATACCAGATGACTATTTGCAGTCTTTTCTTTGGGCAAGAGTTCCATGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR-3UTR CCA 90 bp ATCATGGAACTCTTGCCCAAAGAAAAGACTGCAAATAGTCATCTGGTATATCTTGACAGTTGCAACCCATaGTGGATCCAAAGGTACAGT +
Preference number: 2 (lower is better)
Translates to: IMELLPKEKTANSHLVYLDSCNP*WIQRYS
Trigger: ACTGTACCTTTGGATCCACCATGGGTTGCAACTGTC...AAGATATACCAGATGACTATTTGCAGTCTTTTCTTTGGGCAAGAGTTCCATGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
3UTR CAA 90 bp AATCAGCTGAGAATTCAAGATCAGACACCCTTATCGACCAACATCTaGGGCAAAAATCTGCTATTCTTAAGATGTGAAAATGCAACCTGC +
Preference number: 2 (lower is better)
Translates to: NQLRIQDQTPLSTNI*GKNLLFLRCENATC
Trigger: GCAGGTTGCATTTTCACATCTTAAGAATAGCAGATTTTTGCCCAAGATGTTGGTCGATAAGGGTGTCTGATCTTGAATTCTCAGCTGATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636938.1
3UTR-3UTR TCA 90 bp TTGGACCAAAATTGCTACCTATCATCTATCTTTTTGATTGCAGGGAATCCCTGCGGTTTATGGCTTTCTTaGGGCATGACATCTCTTATA +
Preference number: 2 (lower is better)
Translates to: LDQNCYLSSIFLIAGNPCGLWLS*GMTSLI
Trigger: TATAAGAGATGTCATGCCTCAAGAAAGCCATAAACC...GCAGGGATTCCCTGCAATCAAAAAGATAGATGATAGGTAGCAATTTTGGTCCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
3UTR-3UTR GCA 90 bp ATCATGGAACTCTTGCCCAAAGAAAAGACTGCAAATAGTCATCTGGTATATCTTTTTATGAGGTCCCATTaGCCTCGCAATAATCACTGG +
Preference number: 2 (lower is better)
Translates to: IMELLPKEKTANSHLVYLFMRSH*PRNNHW
Trigger: CCAGTGATTATTGCGAGGGCAATGGGACCTCATAAA...AAGATATACCAGATGACTATTTGCAGTCTTTTCTTTGGGCAAGAGTTCCATGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
3UTR-3UTR GCA 90 bp ACTTACTTACTTACCAGAGGGTGGTTCAAGTCAAACAAACAAAACCAAAGACAGAAAACCAAAGACAGTTaGAACCCATGGTGGATCCAA +
Preference number: 2 (lower is better)
Translates to: TYLLTRGWFKSNKQNQRQKTKDS*NPWWIQ
Trigger: TTGGATCCACCATGGGTTGCAACTGTCTTTGGTTTT...CTGTCTTTGGTTTTGTTTGTTTGACTTGAACCACCCTCTGGTAAGTAAGTAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
3UTR CAA 90 bp TCAGAGTGTGAGTGCATTCTAATGAAAACTTCAGCCCTCATTCAATaGCATATAAAAGCCCTCAAAGAGAACATACAGTACAGCAGTTTT +
Preference number: 2 (lower is better)
Translates to: SECECILMKTSALIQ*HIKALKENIQYSSF
Trigger: AAAACTGCTGTACTGTATGTTCTCTTTGAGGGCTTTTATATGCAATTGAATGAGGGCTGAAGTTTTCATTAGAATGCACTCACACTCTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
3UTR-3UTR CCA 90 bp ACTTACTTACTTACCAGAGGGTGGTTCAAGTCAAACAAACAAAACCAAAGACAGCTAATTATCCAAAAGTaGGTTTTCATCAGGACGTAC +
Preference number: 2 (lower is better)
Translates to: TYLLTRGWFKSNKQNQRQLIIQK*VFIRTY
Trigger: GTACGTCCTGATGAAAACCCACTTTTGGATAATTAG...CTGTCTTTGGTTTTGTTTGTTTGACTTGAACCACCCTCTGGTAAGTAAGTAAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
3UTR CCA 72 bp GTAGCACGGTGTCCAGTCCCGGTAGGGAGGGGTTGCTaGAGGGGTGGCCCACGACCGGGTCGAGTGACTCGG +
Preference number: 3 (lower is better)
Translates to: VARCPVPVGRGC*RGGPRPGRVTR
Trigger: CCGAGTCACTCGACCCGGTCGTGGGCCACCCCTCCAGCAACCCCTCCCTACCGGGACTGGACACCGTGCTAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR-3UTR CAA 90 bp AACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTCCGCCATGCCTTCAGTaGGGTGGGCCTGGTGCCCTG +
Preference number: 3 (lower is better)
Translates to: NFPLHPAAMPSVGWAWCPPPCLQ*GGPGAL
Trigger: CAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGG...AGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
3UTR GCA 72 bp GGTGTAGCACGGTGTCCAGTCCCGGTAGGGAGGGGTTaGTGGAGGGGTGGCCCACGACCGGGTCGAGTGACT +
Preference number: 3 (lower is better)
Translates to: GVARCPVPVGRG*WRGGPRPGRVT
Trigger: AGTCACTCGACCCGGTCGTGGGCCACCCCTCCAGCAACCCCTCCCTACCGGGACTGGACACCGTGCTACACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR GCA 72 bp CTGTGTACCAGGAGCTGCGGTGCAGGGACGGCAGGCTaGCGTTCACCTGGTCCAGGGCCTCTGACTGCTCCA +
Preference number: 3 (lower is better)
Translates to: LCTRSCGAGTAG*RSPGPGPLTAP
Trigger: TGGAGCAGTCAGAGGCCCTGGACCAGGTGAACGGCAGCCTGCCGTCCCTGCACCGCAGCTCCTGGTACACAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR GCA 72 bp GAGATGTCGGGCTCGTCTGTGTACCAGGAGCTGCGGTaGAGGGACGGCAGGCTGCCGTTCACCTGGTCCAGG +
Preference number: 3 (lower is better)
Translates to: EMSGSSVYQELR*RDGRLPFTWSR
Trigger: CCTGGACCAGGTGAACGGCAGCCTGCCGTCCCTGCACCGCAGCTCCTGGTACACAGACGAGCCCGACATCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR CCA 72 bp CTCTGTGAGAGGGCGGGGCCTGCTGTTTCCTGCAGCTaGGGCCGAGCGCATGGTACTCTGCCAGGCTCAACC +
Preference number: 3 (lower is better)
Translates to: LCERAGPAVSCS*GRAHGTLPGST
Trigger: GGTTGAGCCTGGCAGAGTACCATGCGCTCGGCCCCAGCTGCAGGAAACAGCAGGCCCCGCCCTCTCACAGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
3UTR CCA 72 bp GAGCTGCGGTGCAGGGACGGCAGGCTGCCGTTCACCTaGTCCAGGGCCTCTGACTGCTCCACTTGGATCAGG +
Preference number: 3 (lower is better)
Translates to: ELRCRDGRLPFT*SRASDCSTWIR
Trigger: CCTGATCCAAGTGGAGCAGTCAGAGGCCCTGGACCAGGTGAACGGCAGCCTGCCGTCCCTGCACCGCAGCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR-3UTR CAA 90 bp ACCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGCCGCCATGCCTTCAGTaGGGTGGGCCTGGTGCCCTG +
Preference number: 3 (lower is better)
Translates to: TFNFPLHPAAMPSVGWAWPPCLQ*GGPGAL
Trigger: CAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGG...CCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
3UTR-3UTR CAA 90 bp CGGTGCAGGGACGGCAGGCTGCCGTTCACCTGGTCCAGGGCCTCTGACTGCTCCCGCAGGCACTCAAAGTaGAAGGAGGATCTCCGGTGG +
Preference number: 3 (lower is better)
Translates to: RCRDGRLPFTWSRASDCSRRHSK*KEDLRW
Trigger: CCACCGGAGATCCTCCTTCAACTTTGAGTGCCTGCG...GGAGCAGTCAGAGGCCCTGGACCAGGTGAACGGCAGCCTGCCGTCCCTGCACCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR GCA 72 bp CACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTaGCCTGGTACATGGGAGAAGCAGACTCCACAGCAG +
Preference number: 3 (lower is better)
Translates to: HPAAMPSVGWAW*PGTWEKQTPQQ
Trigger: CTGCTGTGGAGTCTGCTTCTCCCATGTACCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
3UTR GCA 72 bp GGTAGGAGATGTCGGGCTCGTCTGTGTACCAGGAGCTaGGGTGCAGGGACGGCAGGCTGCCGTTCACCTGGT +
Preference number: 3 (lower is better)
Translates to: GRRCRARLCTRS*GAGTAGCRSPG
Trigger: ACCAGGTGAACGGCAGCCTGCCGTCCCTGCACCGCAGCTCCTGGTACACAGACGAGCCCGACATCTCCTACC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR TCA 72 bp CTTCCTGGCTGCTCTGCCGGCGCAGGCACTCAAAGTTaGAGGAGGATCTCCGGTGGGATGCTGGGGTGGGAG +
Preference number: 3 (lower is better)
Translates to: LPGCSAGAGTQS*RRISGGMLGWE
Trigger: CTCCCACCCCAGCATCCCACCGGAGATCCTCCTTCAACTTTGAGTGCCTGCGCCGGCAGAGCAGCCAGGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR CCA 72 bp TTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTaGGCCTGGTGCCCTGGTACATGGGAGAAGCAGACT +
Preference number: 3 (lower is better)
Translates to: FPLHPAAMPSVG*AWCPGTWEKQT
Trigger: AGTCTGCTTCTCCCATGTACCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
3UTR CCA 72 bp TTAGATGCAGAGGCAGGGCCGTGCGATGGGGGAAGATaGGAGACGACGGGACCTCTTCCTGGCTGCTCTGCC +
Preference number: 3 (lower is better)
Translates to: LDAEAGPCDGGR*ETTGPLPGCSA
Trigger: GGCAGAGCAGCCAGGAAGAGGTCCCGTCGTCTCCCATCTTCCCCCATCGCACGGCCCTGCCTCTGCATCTAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR-3UTR CAA 90 bp GCGCCGAGGGGCCTGTCAGTCTTTGGGAGTTCGGGCAAACTAGGGATGCAGGACGGAGGAGTGCTTTGCTaGGAAGGGGTCTCCCTGGGG +
Preference number: 3 (lower is better)
Translates to: APRGLSVFGSSGKLGMQDGGVLC*EGVSLG
Trigger: CCCCAGGGAGACCCCTTCCAAGCAAAGCACTCCTCC...GTCCTGCATCCCTAGTTTGCCCGAACTCCCAAAGACTGACAGGCCCCTCGGCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
3UTR GCA 72 bp CTGTTTCCTGCAGCTGGGGCCGAGCGCATGGTACTCTaGCAGGCTCAACCGCTTGGGACCTGTTCCTACCAG +
Preference number: 3 (lower is better)
Translates to: LFPAAGAERMVL*QAQPLGTCSYQ
Trigger: CTGGTAGGAACAGGTCCCAAGCGGTTGAGCCTGGCAGAGTACCATGCGCTCGGCCCCAGCTGCAGGAAACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
3UTR GCA 72 bp TGCCCTGGTACATGGGAGAAGCAGACTCCACAGCAGTaGCCATCTGGACAATGGGGCAGGGCAGGTCTGGCC +
Preference number: 3 (lower is better)
Translates to: CPGTWEKQTPQQ*PSGQWGRAGLA
Trigger: GGCCAGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTACCAGGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
3UTR-3UTR CAA 90 bp CTTAAGCAGCACCACCAGTCCCCAGAGGACAAGAGCAGCTATATCTCATCCACCGGGCCCACATCCCCGTaGGCTCGGGGACGCACGTTC +
Preference number: 3 (lower is better)
Translates to: LKQHHQSPEDKSSYISSTGPTSP*ARGRTF
Trigger: GAACGTGCGTCCCCGAGCCAACGGGGATGTGGGCCC...GGTGGATGAGATATAGCTGCTCTTGTCCTCTGGGGACTGGTGGTGCTGCTTAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR GCA 72 bp TCGGGGACGCACGTTCCCATTAAGCAGGGTGCTGGCTaGACTCTCCATCTCGTCGATGGTGAGGTCACAGGC +
Preference number: 3 (lower is better)
Translates to: SGTHVPIKQGAG*TLHLVDGEVTG
Trigger: GCCTGTGACCTCACCATCGACGAGATGGAGAGTGCAGCCAGCACCCTGCTTAATGGGAACGTGCGTCCCCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR CCA 72 bp AGAGCAGGGCCGGACGCTCAGGAGGTCATGGCGGACTaGCATACAAAAGGAACTCTGTCAGCTCAGCGCCGA +
Preference number: 3 (lower is better)
Translates to: RAGPDAQEVMAD*HTKGTLSAQRR
Trigger: TCGGCGCTGAGCTGACAGAGTTCCTTTTGTATGCCAGTCCGCCATGACCTCCTGAGCGTCCGGCCCTGCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
3UTR CCA 72 bp TTCATCCGCCAGGTCCTCCTCATCCCTCCCAGGGTCTaGCTCTTCGTCGCTGTAGCCAGGACCAAAGTCCTG +
Preference number: 3 (lower is better)
Translates to: FIRQVLLIPPRV*LFVAVARTKVL
Trigger: CAGGACTTTGGTCCTGGCTACAGCGACGAAGAGCCAGACCCTGGGAGGGATGAGGAGGACCTGGCGGATGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR-3UTR CAA 90 bp AGCGCCGAGGGGCCTGTCAGTCTTTGGGAGTTCGGGCAAACTAGGGATGCAGGATTCCGGAGGAGTGCTTaGCTTGGAAGGGGTCTCCCT +
Preference number: 3 (lower is better)
Translates to: SAEGPVSLWEFGQTRDAGFRRSA*LGRGLP
Trigger: AGGGAGACCCCTTCCAAGCAAAGCACTCCTCCGGAA...TCCTGCATCCCTAGTTTGCCCGAACTCCCAAAGACTGACAGGCCCCTCGGCGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
3UTR TCA 72 bp GGGGTTGCTGGAGGGGTGGCCCACGACCGGGTCGAGTaGCTCGGTGAGTACTTCTGGGCTTTACTTGAATCT +
Preference number: 3 (lower is better)
Translates to: GVAGGVAHDRVE*LGEYFWALLES
Trigger: AGATTCAAGTAAAGCCCAGAAGTACTCACCGAGTCACTCGACCCGGTCGTGGGCCACCCCTCCAGCAACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR GCA 72 bp TCATCACCTTTAACTTTCCCCTGCACCCCGCCGCCATaGCTTCAGTTGGGTGGGCCTGGTGCCCTGGTACAT +
Preference number: 3 (lower is better)
Translates to: SSPLTFPCTPPP*LQLGGPGALVH
Trigger: ATGTACCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGGTGATGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
3UTR GCA 72 bp CCTGTCCACTTCTCACTGTATTCTGGACTGGGTCTCTaGAGAGAGCAGGGCCGGACGCTCAGGAGGTCATGG +
Preference number: 3 (lower is better)
Translates to: PVHFSLYSGLGL*REQGRTLRRSW
Trigger: CCATGACCTCCTGAGCGTCCGGCCCTGCTCTCTGCAGAGACCCAGTCCAGAATACAGTGAGAAGTGGACAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
3UTR GCA 72 bp AAGATGGGAGACGACGGGACCTCTTCCTGGCTGCTCTaGCGGCGCAGGCACTCAAAGTTGAAGGAGGATCTC +
Preference number: 3 (lower is better)
Translates to: KMGDDGTSSWLL*RRRHSKLKEDL
Trigger: GAGATCCTCCTTCAACTTTGAGTGCCTGCGCCGGCAGAGCAGCCAGGAAGAGGTCCCGTCGTCTCCCATCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR CCA 72 bp CCCTGGCACAGTACCTGCCCTGTCGGAGGCTCTCACTaGCAAATGACAGCTCTGTGCAAGGAGCACTCCCAA +
Preference number: 3 (lower is better)
Translates to: PWHSTCPVGGSH*QMTALCKEHSQ
Trigger: TTGGGAGTGCTCCTTGCACAGAGCTGTCATTTGCCAGTGAGAGCCTCCGACAGGGCAGGTACTGTGCCAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
3UTR CCA 72 bp CTCTGCAGAGAGCAGGGCCGGACGCTCAGGAGGTCATaGCGGACTGGCATACAAAAGGAACTCTGTCAGCTC +
Preference number: 3 (lower is better)
Translates to: LCREQGRTLRRS*RTGIQKELCQL
Trigger: GAGCTGACAGAGTTCCTTTTGTATGCCAGTCCGCCATGACCTCCTGAGCGTCCGGCCCTGCTCTCTGCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
3UTR CCA 72 bp CTGAGCTTCCTGGCCTGTCCACTTCTCACTGTATTCTaGACTGGGTCTCTGCAGAGAGCAGGGCCGGACGCT +
Preference number: 3 (lower is better)
Translates to: LSFLACPLLTVF*TGSLQRAGPDA
Trigger: AGCGTCCGGCCCTGCTCTCTGCAGAGACCCAGTCCAGAATACAGTGAGAAGTGGACAGGCCAGGAAGCTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
3UTR TCA 72 bp GCTTTGTACGTTCCCTTTCACGAAAAAGAACCACCGTaGGCAACGTCCGCGACAGGCAGCCCTGGCTCCGCA +
Preference number: 3 (lower is better)
Translates to: ALYVPFHEKEPP*ATSATGSPGSA
Trigger: TGCGGAGCCAGGGCTGCCTGTCGCGGACGTTGCTCACGGTGGTTCTTTTTCGTGAAAGGGAACGTACAAAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
3UTR TCA 72 bp TGGGCGAGCTGTCATCCTCGTAGCATTCCTCACTACTaGAATACTCCTGCTCCCCCAAGCAGTGGGGGTCCC +
Preference number: 3 (lower is better)
Translates to: WASCHPRSIPHY*NTPAPPSSGGP
Trigger: GGGACCCCCACTGCTTGGGGGAGCAGGAGTATTTCAGTAGTGAGGAATGCTACGAGGATGACAGCTCGCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR TCA 72 bp GAGCCAGTCTGCCCCTCGCTGGGGGCTACAAGGTGGTaGTGCATATCATTTCATCCGCCAGGTCCTCCTCAT +
Preference number: 3 (lower is better)
Translates to: EPVCPSLGATRW*CISFHPPGPPH
Trigger: ATGAGGAGGACCTGGCGGATGAAATGATATGCATCACCACCTTGTAGCCCCCAGCGAGGGGCAGACTGGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR-3UTR CAA 90 bp CCTCCTCACCCATCCTCTGTGAGAGGGCGGGGCCTGCTGTTTCCTGCAGCTGGGGCAGCTTTGGACATATaGGCATTATTGAGATTGGCA +
Preference number: 3 (lower is better)
Translates to: PPHPSSVRGRGLLFPAAGAALDI*ALLRLA
Trigger: TGCCAATCTCAATAATGCCAATATGTCCAAAGCTGC...CCCAGCTGCAGGAAACAGCAGGCCCCGCCCTCTCACAGAGGATGGGTGAGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR-3UTR CAA 90 bp TATTTCAGAACAGCTAAACAGGAACCAGGACGCAGTGTATTTGGGGGAAAGGGTCCGCCATGCCTTCAGTaGGGTGGGCCTGGTGCCCTG +
Preference number: 3 (lower is better)
Translates to: YFRTAKQEPGRSVFGGKGPPCLQ*GGPGAL
Trigger: CAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGG...ACCCTTTCCCCCAAATACACTGCGTCCTGGTTCCTGTTTAGCTGTTCTGAAATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
3UTR-3UTR CAA 90 bp ACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAAGGCAACAATACGATTaGTACAGACCCCGACACTCC +
Preference number: 3 (lower is better)
Translates to: TWEKQTPQQCPSGQWGRARQQYD*YRPRHS
Trigger: GGAGTGTCGGGGTCTGTACAAATCGTATTGTTGCCT...TGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
3UTR-3UTR CAA 90 bp AACCGTAACTATGGATACCCAAGGGGCAGAGCAGCCAGCTGGACCTGCTCTGTATGCTTGTCGCTGTTTTaGTTCCGGAAGCTGCTGGGG +
Preference number: 3 (lower is better)
Translates to: NRNYGYPRGRAASWTCSVCLSLF*FRKLLG
Trigger: CCCCAGCAGCTTCCGGAACAAAAACAGCGACAAGCA...TACAGAGCAGGTCCAGCTGGCTGCTCTGCCCCTTGGGTATCCATAGTTACGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR GCA 72 bp TCCCTGACTCCCAGTGTCCTTGAAACTAGACCACACTaGTTCCAAAGAGGCATCCCCAGACTGGCTCTGAGC +
Preference number: 3 (lower is better)
Translates to: SLTPSVLETRPH*FQRGIPRLALS
Trigger: GCTCAGAGCCAGTCTGGGGATGCCTCTTTGGAAGCAGTGTGGTCTAGTTTCAAGGACACTGGGAGTCAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000645528.2
3UTR GCA 72 bp GGGGCCTCTCAGAGTCGATGTTTCTGCCTGGGTATCTaGTGTAGTAGCCATAGTTTTGCCTGCTCCAGGTGG +
Preference number: 3 (lower is better)
Translates to: GASQSRCFCLGI*CSSHSFACSRW
Trigger: CCACCTGGAGCAGGCAAAACTATGGCTACTACAGCAGATACCCAGGCAGAAACATCGACTCTGAGAGGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR-3UTR CAA 90 bp GGTGATGCATATCATTTCATCCGCCAGGTCCTCCTCATCCCTCCCAGGGTCTGGGTAGTAGGCGTCTCCTaGGAGATCTCCGTGAATCAT +
Preference number: 3 (lower is better)
Translates to: GDAYHFIRQVLLIPPRVWVVGVS*EISVNH
Trigger: ATGATTCACGGAGATCTCCAAGGAGACGCCTACTAC...CCAGACCCTGGGAGGGATGAGGAGGACCTGGCGGATGAAATGATATGCATCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR GCA 72 bp GATGGTAGCCTCGGGGCCTCTCAGAGTCGATGTTTCTaGCTGGGTATCTGCTGTAGTAGCCATAGTTTTGCC +
Preference number: 3 (lower is better)
Translates to: DGSLGASQSRCF*LGICCSSHSFA
Trigger: GGCAAAACTATGGCTACTACAGCAGATACCCAGGCAGAAACATCGACTCTGAGAGGCCCCGAGGCTACCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR CCA 72 bp GTAGCCTCGGGGCCTCTCAGAGTCGATGTTTCTGCCTaGGTATCTGCTGTAGTAGCCATAGTTTTGCCTGCT +
Preference number: 3 (lower is better)
Translates to: VASGPLRVDVSA*VSAVVAIVLPA
Trigger: AGCAGGCAAAACTATGGCTACTACAGCAGATACCCAGGCAGAAACATCGACTCTGAGAGGCCCCGAGGCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR-3UTR CAA 90 bp AGGAACCAGGAGGATAAGAATATCCATAATTTCAGAGCTGCCCTGGCACAGTACGCCAGGCTCAACCGCTaGGGACCTGTTCCTACCAGG +
Preference number: 3 (lower is better)
Translates to: RNQEDKNIHNFRAALAQYARLNR*GPVPTR
Trigger: CCTGGTAGGAACAGGTCCCAAGCGGTTGAGCCTGGC...GTACTGTGCCAGGGCAGCTCTGAAATTATGGATATTCTTATCCTCCTGGTTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
3UTR-3UTR CAA 90 bp CAGGACTTTGGAATGGAGTCAGATACCCACCTTAGGCAGGTCTGCTTAATCTTTGGAGGAGTGCTTTGCTaGGAAGGGGTCTCCCTGGGG +
Preference number: 3 (lower is better)
Translates to: QDFGMESDTHLRQVCLIFGGVLC*EGVSLG
Trigger: CCCCAGGGAGACCCCTTCCAAGCAAAGCACTCCTCC...AAAGATTAAGCAGACCTGCCTAAGGTGGGTATCTGACTCCATTCCAAAGTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
3UTR-3UTR CAA 90 bp TTTGGGTGTGGTGGTGTTTCCTGTGGACACGTTAAGATGGAACCTGAGGTGTTGTTCCGGAGGAGTGCTTaGCTTGGAAGGGGTCTCCCT +
Preference number: 3 (lower is better)
Translates to: FGCGGVSCGHVKMEPEVLFRRSA*LGRGLP
Trigger: AGGGAGACCCCTTCCAAGCAAAGCACTCCTCCGGAA...CAACACCTCAGGTTCCATCTTAACGTGTCCACAGGAAACACCACCACACCCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000645528.2
3UTR-3UTR CAA 90 bp AGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTGGTTTCCATGGGCAGCTTaGGACATATTGGCATTATTG +
Preference number: 3 (lower is better)
Translates to: RSRLHSSAHLDNGAGQVWFPWAA*DILALL
Trigger: CAATAATGCCAATATGTCCAAAGCTGCCCATGGAAA...CCAGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR GCA 72 bp ATATCCATAATTTCAGAGCTGCCCTGGCACAGTACCTaGCCTGTCGGAGGCTCTCACTGGCAAATGACAGCT +
Preference number: 3 (lower is better)
Translates to: ISIISELPWHST*PVGGSHWQMTA
Trigger: AGCTGTCATTTGCCAGTGAGAGCCTCCGACAGGGCAGGTACTGTGCCAGGGCAGCTCTGAAATTATGGATAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
3UTR CCA 72 bp AGGAGGATAAGAATATCCATAATTTCAGAGCTGCCCTaGCACAGTACCTGCCCTGTCGGAGGCTCTCACTGG +
Preference number: 3 (lower is better)
Translates to: RRIRISIISELP*HSTCPVGGSHW
Trigger: CCAGTGAGAGCCTCCGACAGGGCAGGTACTGTGCCAGGGCAGCTCTGAAATTATGGATATTCTTATCCTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
3UTR CCA 72 bp GCCCATTTTCAGACACATGCTCAAGGTTCCCAATGCTaGGCCGCTTTCCATGGGCAGCTTTGGACATATTGG +
Preference number: 3 (lower is better)
Translates to: AHFQTHAQGSQC*AAFHGQLWTYW
Trigger: CCAATATGTCCAAAGCTGCCCATGGAAAGCGGCCCAGCATTGGGAACCTTGAGCATGTGTCTGAAAATGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR-3UTR CAA 90 bp GAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTGAGGTTTATGGCTTTCTaGAGGCATGACATCTCTTAT +
Preference number: 3 (lower is better)
Translates to: EKQTPQQCPSGQWGRAGLRFMAF*RHDISY
Trigger: ATAAGAGATGTCATGCCTCAAGAAAGCCATAAACCT...CAGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
3UTR-3UTR CAA 90 bp ACCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGGTCATCTGGTATATCTaGTGGAAAGATGATAGGTTT +
Preference number: 3 (lower is better)
Translates to: TFNFPLHPAAMPSVGWAWVIWYI*WKDDRF
Trigger: AAACCTATCATCTTTCCACAAGATATACCAGATGAC...CCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
3UTR-3UTR CAA 90 bp GAAATGGCGCTCCCTGCGGCTGGTATTAGGTTACCATTGGCACCGAAGGAACCACAAAACCAAAGACAGTaGCAACCCATGGTGGATCCA +
Preference number: 3 (lower is better)
Translates to: EMALPAAGIRLPLAPKEPQNQRQ*QPMVDP
Trigger: TGGATCCACCATGGGTTGCAACTGTCTTTGGTTTTG...TGGTTCCTTCGGTGCCAATGGTAACCTAATACCAGCCGCAGGGAGCGCCATTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
3UTR-3UTR CAA 90 bp CTTAAGCAGCACCACCAGTCCCCAGAGGACAAGAGCAGCTATATCTCATCCACCGGTATTAGGTTACCATaGGCACCGAAGGAACCAGGA +
Preference number: 3 (lower is better)
Translates to: LKQHHQSPEDKSSYISSTGIRLP*APKEPG
Trigger: TCCTGGTTCCTTCGGTGCCAATGGTAACCTAATACC...GGTGGATGAGATATAGCTGCTCTTGTCCTCTGGGGACTGGTGGTGCTGCTTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
3UTR-3UTR CAA 90 bp GTTAAGCTTTGTACGTTCCCTTTCACGAAAAAGAACCACCGTGAGCAACGTCCGTTCCGGAGGAGTGCTTaGCTTGGAAGGGGTCTCCCT +
Preference number: 3 (lower is better)
Translates to: VKLCTFPFTKKNHREQRPFRRSA*LGRGLP
Trigger: AGGGAGACCCCTTCCAAGCAAAGCACTCCTCCGGAA...CGGACGTTGCTCACGGTGGTTCTTTTTCGTGAAAGGGAACGTACAAAGCTTAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
3UTR-3UTR CAA 90 bp TCATCACCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGAGGTTTATGGCTTTCTaGAGGCATGACATCTCTTAT +
Preference number: 3 (lower is better)
Translates to: SSPLTFPCTPPPCLQLGGRFMAF*RHDISY
Trigger: ATAAGAGATGTCATGCCTCAAGAAAGCCATAAACCT...CCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGGTGATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
3UTR-3UTR CAA 90 bp CCTGGTACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGTTTATGGCTTTCTaGAGGCATGACATCTCTTAT +
Preference number: 3 (lower is better)
Translates to: PGTWEKQTPQQCPSGQWGRFMAF*RHDISY
Trigger: ATAAGAGATGTCATGCCTCAAGAAAGCCATAAACCT...GCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTACCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
3UTR-3UTR CAA 90 bp AGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTGGGTCATCTGGTATATCTaGTGGAAAGATGATAGGTTT +
Preference number: 3 (lower is better)
Translates to: RSRLHSSAHLDNGAGQVWVIWYI*WKDDRF
Trigger: AAACCTATCATCTTTCCACAAGATATACCAGATGAC...CCAGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
3UTR-3UTR CAA 90 bp GAGCTTCCTGGCCTGTCCACTTCTCACTGTATTCTGGACTGGGTCTCTGCAGAGTCTCTGAGTCTCTGCTaGGAAGGGAAAACTGTTAAG +
Preference number: 3 (lower is better)
Translates to: ELPGLSTSHCILDWVSAESLSLC*EGKTVK
Trigger: CTTAACAGTTTTCCCTTCCAAGCAGAGACTCAGAGA...CTCTGCAGAGACCCAGTCCAGAATACAGTGAGAAGTGGACAGGCCAGGAAGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
3UTR TCA 72 bp CACTTAGGGTCCTGGTCTGGCAATTTTGGCCTGATGTaGTGCCACAAGACCCAACAGAGAGAGACACAGAGT +
Preference number: 3 (lower is better)
Translates to: HLGSWSGNFGLM*CHKTQQRETQS
Trigger: ACTCTGTGTCTCTCTCTGTTGGGTCTTGTGGCATCACATCAGGCCAAAATTGCCAGACCAGGACCCTAAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
3UTR GCA 72 bp TATGGATACCCAAGGGGCAGAGCAGCCAGCTGGACCTaGTCTGTAATTCACTTACTTACTTACCAGAGGGTG +
Preference number: 3 (lower is better)
Translates to: YGYPRGRAASWT*SVIHLLTYQRV
Trigger: CACCCTCTGGTAAGTAAGTAAGTGAATTACAGAGCAGGTCCAGCTGGCTGCTCTGCCCCTTGGGTATCCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
3UTR GCA 72 bp GATGCCCATTTTCAGACACATGCTCAAGGTTCCCAATaGTGGGCCGCTTTCCATGGGCAGCTTTGGACATAT +
Preference number: 3 (lower is better)
Translates to: DAHFQTHAQGSQ*WAAFHGQLWTY
Trigger: ATATGTCCAAAGCTGCCCATGGAAAGCGGCCCAGCATTGGGAACCTTGAGCATGTGTCTGAAAATGGGCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR CCA 72 bp GATCATCGCCTCTATCAGACACTTAGGGTCCTGGTCTaGCAATTTTGGCCTGATGTGATGCCACAAGACCCA +
Preference number: 3 (lower is better)
Translates to: DHRLYQTLRVLV*QFWPDVMPQDP
Trigger: TGGGTCTTGTGGCATCACATCAGGCCAAAATTGCCAGACCAGGACCCTAAGTGTCTGATAGAGGCGATGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
3UTR CCA 72 bp CGTAACTATGGATACCCAAGGGGCAGAGCAGCCAGCTaGACCTGCTCTGTAATTCACTTACTTACTTACCAG +
Preference number: 3 (lower is better)
Translates to: RNYGYPRGRAAS*TCSVIHLLTYQ
Trigger: CTGGTAAGTAAGTAAGTGAATTACAGAGCAGGTCCAGCTGGCTGCTCTGCCCCTTGGGTATCCATAGTTACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
3UTR CCA 72 bp AAATGGCGCTCCCTGCGGCTGGTATTAGGTTACCATTaGCACCGAAGGAACCAGGAGGATAAGAATATCCAT +
Preference number: 3 (lower is better)
Translates to: KWRSLRLVLGYH*HRRNQEDKNIH
Trigger: ATGGATATTCTTATCCTCCTGGTTCCTTCGGTGCCAATGGTAACCTAATACCAGCCGCAGGGAGCGCCATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
3UTR CCA 72 bp CTCTATCAGACACTTAGGGTCCTGGTCTGGCAATTTTaGCCTGATGTGATGCCACAAGACCCAACAGAGAGA +
Preference number: 3 (lower is better)
Translates to: LYQTLRVLVWQF*PDVMPQDPTER
Trigger: TCTCTCTGTTGGGTCTTGTGGCATCACATCAGGCCAAAATTGCCAGACCAGGACCCTAAGTGTCTGATAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
3UTR CCA 72 bp TTGGGTGTGGTGGTGTTTCCTGTGGACACGTTAAGATaGAACCTGAGGTGTTGCCTGGATTGGTTTTGGCAT +
Preference number: 3 (lower is better)
Translates to: LGVVVFPVDTLR*NLRCCLDWFWH
Trigger: ATGCCAAAACCAATCCAGGCAACACCTCAGGTTCCATCTTAACGTGTCCACAGGAAACACCACCACACCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000645528.2
3UTR-3UTR CAA 90 bp CGACACTCCAATCCTATAGATCACCACGTTGCTCCTCTGTCCCCAGCACCCCTTTTAAAAATGGATATGTaGGGCCCAGTGACTGATATG +
Preference number: 3 (lower is better)
Translates to: RHSNPIDHHVAPLSPAPLLKMDM*GPVTDM
Trigger: CATATCAGTCACTGGGCCCAACATATCCATTTTTAA...AAGGGGTGCTGGGGACAGAGGAGCAACGTGGTGATCTATAGGATTGGAGTGTCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
3UTR-3UTR CAA 90 bp AACCGTAACTATGGATACCCAAGGGGCAGAGCAGCCAGCTGGACCTGCTCTGTATCTAAGTTTACCTGGTaGCGAGTGCATTATTATTCC +
Preference number: 3 (lower is better)
Translates to: NRNYGYPRGRAASWTCSVSKFTW*RVHYYS
Trigger: GGAATAATAATGCACTCGCAACCAGGTAAACTTAGA...TACAGAGCAGGTCCAGCTGGCTGCTCTGCCCCTTGGGTATCCATAGTTACGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
3UTR TCA 72 bp GAGGTCACAGGCATCAGCGATTTCGTGTTTTGTTGCTaGCACAAATTTTGGGTCCCTTGCATAGCGTCCCAA +
Preference number: 3 (lower is better)
Translates to: EVTGISDFVFCC*HKFWVPCIASQ
Trigger: TTGGGACGCTATGCAAGGGACCCAAAATTTGTGTCAGCAACAAAACACGAAATCGCTGATGCCTGTGACCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR GCA 72 bp TTTCCTGTGGACACGTTAAGATGGAACCTGAGGTGTTaGCTGGATTGGTTTTGGCATGCGGGTGTATGTGTT +
Preference number: 3 (lower is better)
Translates to: FPVDTLRWNLRC*LDWFWHAGVCV
Trigger: AACACATACACCCGCATGCCAAAACCAATCCAGGCAACACCTCAGGTTCCATCTTAACGTGTCCACAGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
3UTR CCA 72 bp ACATGCTCAAGGTTCCCAATGCTGGGCCGCTTTCCATaGGCAGCTTTGGACATATTGGCATTATTGAGATTG +
Preference number: 3 (lower is better)
Translates to: TCSRFPMLGRFP*AALDILALLRL
Trigger: CAATCTCAATAATGCCAATATGTCCAAAGCTGCCCATGGAAAGCGGCCCAGCATTGGGAACCTTGAGCATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR-3UTR CAA 90 bp AACCGTAACTATGGATACCCAAGGGGCAGAGCAGCCAGCTGGACCTGCTCTGTAGACATATTGGCATTATaGAGATTGGCATTTGTTGAG +
Preference number: 3 (lower is better)
Translates to: NRNYGYPRGRAASWTCSVDILAL*RLAFVE
Trigger: CTCAACAAATGCCAATCTCAATAATGCCAATATGTC...TACAGAGCAGGTCCAGCTGGCTGCTCTGCCCCTTGGGTATCCATAGTTACGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR-3UTR CAA 90 bp GACAGTTGCAACCCATGGTGGATCCAAAGGTACAGTATCAAAATCATGGAACTCACTTCTGGGCTTTACTaGAATCTAGGCCGGCAACTG +
Preference number: 3 (lower is better)
Translates to: DSCNPWWIQRYSIKIMELTSGLY*NLGRQL
Trigger: CAGTTGCCGGCCTAGATTCAAGTAAAGCCCAGAAGT...GAGTTCCATGATTTTGATACTGTACCTTTGGATCCACCATGGGTTGCAACTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636448.1
3UTR CCA 72 bp GGCTCAGCATCAGATGTACAGACTCCAACCACCACTTaGAATCAGCTGAGAATTCAAGATCAGACACCCTTA +
Preference number: 3 (lower is better)
Translates to: GSASDVQTPTTT*NQLRIQDQTPL
Trigger: TAAGGGTGTCTGATCTTGAATTCTCAGCTGATTCCAAGTGGTGGTTGGAGTCTGTACATCTGATGCTGAGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636938.1
3UTR TCA 72 bp CAGATGTACAGACTCCAACCACCACTTGGAATCAGCTaGGAATTCAAGATCAGACACCCTTATCGACCAACA +
Preference number: 3 (lower is better)
Translates to: QMYRLQPPLGIS*EFKIRHPYRPT
Trigger: TGTTGGTCGATAAGGGTGTCTGATCTTGAATTCTCAGCTGATTCCAAGTGGTGGTTGGAGTCTGTACATCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636938.1
3UTR CCA 72 bp GACACGTTAAGATGGAACCTGAGGTGTTGCCTGGATTaGTTTTGGCATGCGGGTGTATGTGTTAGTTTCAAT +
Preference number: 3 (lower is better)
Translates to: DTLRWNLRCCLD*FWHAGVCVSFN
Trigger: ATTGAAACTAACACATACACCCGCATGCCAAAACCAATCCAGGCAACACCTCAGGTTCCATCTTAACGTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
3UTR-3UTR CAA 90 bp TTAAGATGTGAAAATGCAACCTGCAGGGTTACCTCTGTTGACATCTTTGTGCATATGGAACCTGAGGTGTaGCCTGGATTGGTTTTGGCA +
Preference number: 3 (lower is better)
Translates to: LRCENATCRVTSVDIFVHMEPEV*PGLVLA
Trigger: TGCCAAAACCAATCCAGGCAACACCTCAGGTTCCAT...ATGCACAAAGATGTCAACAGAGGTAACCCTGCAGGTTGCATTTTCACATCTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636938.1
3UTR TCA 72 bp TGTAAACTGGCGTCACATCACAGAAAACCTTATTTATaGGGTCCCATTGCCCTCGCAATAATCACTGGTAGC +
Preference number: 3 (lower is better)
Translates to: CKLASHHRKPYL*GPIALAIITGS
Trigger: GCTACCAGTGATTATTGCGAGGGCAATGGGACCTCATAAATAAGGTTTTCTGTGATGTGACGCCAGTTTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
3UTR TCA 72 bp GTGCATTATTATTCCAGTTTACAGTTGCCCTTAGCGTaGCAGTCAGAAACCGACCATCGGAGTGATATTCTC +
Preference number: 3 (lower is better)
Translates to: VHYYSSLQLPLA*QSETDHRSDIL
Trigger: GAGAATATCACTCCGATGGTCGGTTTCTGACTGTCACGCTAAGGGCAACTGTAAACTGGAATAATAATGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
3UTR GCA 72 bp TACCTATCATCTATCTTTTTGATTGCAGGGAATCCCTaGCAAGGTAACCTGACAGTCGGCCTAATTCTGTTG +
Preference number: 3 (lower is better)
Translates to: YLSSIFLIAGNP*QGNLTVGLILL
Trigger: CAACAGAATTAGGCCGACTGTCAGGTTACCTTGGCAGGGATTCCCTGCAATCAAAAAGATAGATGATAGGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
3UTR-3UTR CAA 90 bp AGGAACCAGGAGGATAAGAATATCCATAATTTCAGAGCTGCCCTGGCACAGTACTCTAAGTTTACCTGGTaGCGAGTGCATTATTATTCC +
Preference number: 3 (lower is better)
Translates to: RNQEDKNIHNFRAALAQYSKFTW*RVHYYS
Trigger: GGAATAATAATGCACTCGCAACCAGGTAAACTTAGA...GTACTGTGCCAGGGCAGCTCTGAAATTATGGATATTCTTATCCTCCTGGTTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
3UTR-3UTR CAA 90 bp AGTGGGGAACTACAATTATTAGGACCCATGGATATTGCTGCAGTTCAAATACAAAGGCAACAATACGATTaGTACAGACCCCGACACTCC +
Preference number: 3 (lower is better)
Translates to: SGELQLLGPMDIAAVQIQRQQYD*YRPRHS
Trigger: GGAGTGTCGGGGTCTGTACAAATCGTATTGTTGCCT...TTGTATTTGAACTGCAGCAATATCCATGGGTCCTAATAATTGTAGTTCCCCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
3UTR-3UTR CAA 90 bp AATGTTGATCTTAAAACCCAAACTGGCCACTTTGGGTGTCTTGGGCTCAGCATCTTATCGACCAACATCTaGGGCAAAAATCTGCTATTC +
Preference number: 3 (lower is better)
Translates to: NVDLKTQTGHFGCLGLSILSTNI*GKNLLF
Trigger: GAATAGCAGATTTTTGCCCAAGATGTTGGTCGATAA...GATGCTGAGCCCAAGACACCCAAAGTGGCCAGTTTGGGTTTTAAGATCAACATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636938.1
3UTR TCA 72 bp ATGGTGCAGCCTGTAAGAATGCCAGTTTGTAAGTACTaGCTTTGGAAAAGATCATCGCCTCTATCAGACACT +
Preference number: 3 (lower is better)
Translates to: MVQPVRMPVCKY*LWKRSSPLSDT
Trigger: AGTGTCTGATAGAGGCGATGATCTTTTCCAAAGTCAGTACTTACAAACTGGCATTCTTACAGGCTGCACCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
3UTR GCA 72 bp GTGGGTTTTCATCAGGACGTACAGTCAGAGTGTGAGTaGATTCTAATGAAAACTTCAGCCCTCATTCAATTG +
Preference number: 3 (lower is better)
Translates to: VGFHQDVQSECE*ILMKTSALIQL
Trigger: CAATTGAATGAGGGCTGAAGTTTTCATTAGAATGCACTCACACTCTGACTGTACGTCCTGATGAAAACCCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
3UTR-3UTR CAA 90 bp AGGAACCAGGAGGATAAGAATATCCATAATTTCAGAGCTGCCCTGGCACAGTACGTCATCTGGTATATCTaGTGGAAAGATGATAGGTTT +
Preference number: 3 (lower is better)
Translates to: RNQEDKNIHNFRAALAQYVIWYI*WKDDRF
Trigger: AAACCTATCATCTTTCCACAAGATATACCAGATGAC...GTACTGTGCCAGGGCAGCTCTGAAATTATGGATATTCTTATCCTCCTGGTTCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
3UTR-3UTR CAA 90 bp TTGGACCAAAATTGCTACCTATCATCTATCTTTTTGATTGCAGGGAATCCCTGCTTAAAAATGGATATGTaGGGCCCAGTGACTGATATG +
Preference number: 3 (lower is better)
Translates to: LDQNCYLSSIFLIAGNPCLKMDM*GPVTDM
Trigger: CATATCAGTCACTGGGCCCAACATATCCATTTTTAA...GCAGGGATTCCCTGCAATCAAAAAGATAGATGATAGGTAGCAATTTTGGTCCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
3UTR CCA 72 bp TGTTCTTCATATCACCCCCAAAATAATCACACCAAATaGCCAAAGGGCTTTCTTTATCAGTTGGCCTTAATG +
Preference number: 3 (lower is better)
Translates to: CSSYHPQNNHTK*PKGFLYQLALM
Trigger: CATTAAGGCCAACTGATAAAGAAAGCCCTTTGGCCATTTGGTGTGATTATTTTGGGGGTGATATGAAGAACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636627.1
3UTR-3UTR CAA 90 bp AGTGGGGAACTACAATTATTAGGACCCATGGATATTGCTGCAGTTCAAATACAAAGGTTTATGGCTTTCTaGAGGCATGACATCTCTTAT +
Preference number: 3 (lower is better)
Translates to: SGELQLLGPMDIAAVQIQRFMAF*RHDISY
Trigger: ATAAGAGATGTCATGCCTCAAGAAAGCCATAAACCT...TTGTATTTGAACTGCAGCAATATCCATGGGTCCTAATAATTGTAGTTCCCCACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
3UTR CCA 72 bp AACTCTTGCCCAAAGAAAAGACTGCAAATAGTCATCTaGTATATCTTGTGGAAAGATGATAGGTTTATAGTG +
Preference number: 3 (lower is better)
Translates to: NSCPKKRLQIVI*YILWKDDRFIV
Trigger: CACTATAAACCTATCATCTTTCCACAAGATATACCAGATGACTATTTGCAGTCTTTTCTTTGGGCAAGAGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
3UTR GCA 72 bp ATTTTAAACAAACTAGTGTATCTAAGTTTACCTGGTTaGGAGTGCATTATTATTCCAGTTTACAGTTGCCCT +
Preference number: 3 (lower is better)
Translates to: ILNKLVYLSLPG*ECIIIPVYSCP
Trigger: AGGGCAACTGTAAACTGGAATAATAATGCACTCGCAACCAGGTAAACTTAGATACACTAGTTTGTTTAAAAT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR GCA 90 bp CTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGGCAGGGACGGCAGGCTaGCGTTCACCTGGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: LSPAPRRHAFSWVGLVPWAGTAG*RSPGPG
Trigger: CCCTGGACCAGGTGAACGGCAGCCTGCCGTCCCTGC...CCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR GCA 90 bp AACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGCAGGGACGGCAGGCTaGCGTTCACCTGGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: NFPLHPAAMPSVGWAWCPAGTAG*RSPGPG
Trigger: CCCTGGACCAGGTGAACGGCAGCCTGCCGTCCCTGC...AGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR GCA 90 bp TGCAGAGGCAGGGCCGTGCGATGGGGGAAGATGGGAGACGACGGGACCTCTTCCTACCAGGAGCTGCGGTaGAGGGACGGCAGGCTGCCG +
Preference number: 4 (lower is better)
Translates to: CRGRAVRWGKMGDDGTSSYQELR*RDGRLP
Trigger: CGGCAGCCTGCCGTCCCTGCACCGCAGCTCCTGGTA...GGAAGAGGTCCCGTCGTCTCCCATCTTCCCCCATCGCACGGCCCTGCCTCTGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636448.1
CDS-3UTR CCA 90 bp GCAGATGAGCCACGGCCCCGCTTCCACCTTCCGGAGGAGTGCTTTGCTTGGAAGCAGAGGGCCCCGCCTTaGCCGCGCCTCTCCGTCTCC +
Preference number: 4 (lower is better)
Translates to: ADEPRPRFHLPEECFAWKQRAPP*PRLSVS
Trigger: GGAGACGGAGAGGCGCGGCCAAGGCGGGGCCCTCTG...CTTCCAAGCAAAGCACTCCTCCGGAAGGTGGAAGCGGGGCCGTGGCTCATCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000640483.1
CDS-3UTR CCA 90 bp AACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGGTTGCTGGAGGGGTaGCCCACGACCGGGTCGAGT +
Preference number: 4 (lower is better)
Translates to: NFPLHPAAMPSVGWAWCPGLLEG*PTTGSS
Trigger: ACTCGACCCGGTCGTGGGCCACCCCTCCAGCAACCC...AGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CCA 90 bp CCTCCTCACCCATCCTCTGTGAGAGGGCGGGGCCTGCTGTTTCCTGCAGCTGGGGGGTTGCTGGAGGGGTaGCCCACGACCGGGTCGAGT +
Preference number: 4 (lower is better)
Translates to: PPHPSSVRGRGLLFPAAGGLLEG*PTTGSS
Trigger: ACTCGACCCGGTCGTGGGCCACCCCTCCAGCAACCC...CCCAGCTGCAGGAAACAGCAGGCCCCGCCCTCTCACAGAGGATGGGTGAGGAGG
68% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CCA 90 bp TGCAGAGGCAGGGCCGTGCGATGGGGGAAGATGGGAGACGACGGGACCTCTTCCGGGTTGCTGGAGGGGTaGCCCACGACCGGGTCGAGT +
Preference number: 4 (lower is better)
Translates to: CRGRAVRWGKMGDDGTSSGLLEG*PTTGSS
Trigger: ACTCGACCCGGTCGTGGGCCACCCCTCCAGCAACCC...GGAAGAGGTCCCGTCGTCTCCCATCTTCCCCCATCGCACGGCCCTGCCTCTGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636448.1
CDS-3UTR CCA 90 bp AACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGCCCACATCCCCGTTaGCTCGGGGACGCACGTTCC +
Preference number: 4 (lower is better)
Translates to: NFPLHPAAMPSVGWAWCPGPHPR*LGDARS
Trigger: GGAACGTGCGTCCCCGAGCCAACGGGGATGTGGGCC...AGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR GCA 90 bp CCTCCTCACCCATCCTCTGTGAGAGGGCGGGGCCTGCTGTTTCCTGCAGCTGGGTGCACCCCGCCGCCATaGCTTCAGTTGGGTGGGCCT +
Preference number: 4 (lower is better)
Translates to: PPHPSSVRGRGLLFPAAGCTPPP*LQLGGP
Trigger: AGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCA...CCCAGCTGCAGGAAACAGCAGGCCCCGCCCTCTCACAGAGGATGGGTGAGGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CCA 90 bp ACCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCAGGGCACTGTGCTaGGCGTTGAGGCGGGGGCGG +
Preference number: 4 (lower is better)
Translates to: TFNFPLHPAAMPSVGWAWCRALC*ALRRGR
Trigger: CCGCCCCCGCCTCAACGCCCAGCACAGTGCCCTGCA...CCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR CCA 90 bp GGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTCAGAGGGCCCCGCCTTaGCCGCGCCTCTCCGTCTCC +
Preference number: 4 (lower is better)
Translates to: GEADSTAVPIWTMGQGRSQRAPP*PRLSVS
Trigger: GGAGACGGAGAGGCGCGGCCAAGGCGGGGCCCTCTG...AGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288139.11
CDS-3UTR CCA 90 bp GCTCCGCAGATGAGCCACGGCCCCGCTTCCACCTTCCGGAGGAGTGCTTTGCTTAGGAGTGGCTGCGGATaGGGTCCTCTGCGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: APQMSHGPASTFRRSALLRSGCG*GPLRPG
Trigger: CCCTGGCCGCAGAGGACCCCATCCGCAGCCACTCCT...AAGCAAAGCACTCCTCCGGAAGGTGGAAGCGGGGCCGTGGCTCATCTGCGGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR CCA 90 bp CGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCAGGCCCACATCCCCGTTaGCTCGGGGACGCACGTTCC +
Preference number: 4 (lower is better)
Translates to: RRHAFSWVGLVPWYMGEAGPHPR*LGDARS
Trigger: GGAACGTGCGTCCCCGAGCCAACGGGGATGTGGGCC...TGCTTCTCCCATGTACCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR TCA 90 bp CTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGGGCCCCCGTAAGCCATaGTGCCATCGTACATCACAG +
Preference number: 4 (lower is better)
Translates to: LSPAPRRHAFSWVGLVPWGPRKP*CHRTSQ
Trigger: CTGTGATGTACGATGGCATCATGGCTTACGGGGGCC...CCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR TCA 90 bp GAGCTGCGGTGCAGGGACGGCAGGCTGCCGTTCACCTGGTCCAGGGCCTCTGACACACTGGACCTTCTCTaGGGCTCCCGGTCATGCTTG +
Preference number: 4 (lower is better)
Translates to: ELRCRDGRLPFTWSRASDTLDLL*GSRSCL
Trigger: CAAGCATGACCGGGAGCCTCAGAGAAGGTCCAGTGT...GTCAGAGGCCCTGGACCAGGTGAACGGCAGCCTGCCGTCCCTGCACCGCAGCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636448.1
CDS-3UTR TCA 90 bp AGCGCCGAGGGGCCTGTCAGTCTTTGGGAGTTCGGGCAAACTAGGGATGCAGGACCCTGGCTCCGCAGATaGGCCACGGCCCCGCTTCCA +
Preference number: 4 (lower is better)
Translates to: SAEGPVSLWEFGQTRDAGPWLRR*ATAPLP
Trigger: TGGAAGCGGGGCCGTGGCTCATCTGCGGAGCCAGGG...TCCTGCATCCCTAGTTTGCCCGAACTCCCAAAGACTGACAGGCCCCTCGGCGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR GCA 90 bp CCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGTGTGCAGGGCACTGTaGTGGGCGTTGAGGCGGGGG +
Preference number: 4 (lower is better)
Translates to: PLTFPCTPPPCLQLGGPGVCRAL*WALRRG
Trigger: CCCCCGCCTCAACGCCCAGCACAGTGCCCTGCACAC...ACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR GCA 90 bp ACCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTACCAGGAGCTGCGGTaGAGGGACGGCAGGCTGCCG +
Preference number: 4 (lower is better)
Translates to: TFNFPLHPAAMPSVGWAWYQELR*RDGRLP
Trigger: CGGCAGCCTGCCGTCCCTGCACCGCAGCTCCTGGTA...CCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR GCA 90 bp CGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCAAGGCCAGAGCCAGTCTaGCCCTCGCTGGGGGCTACA +
Preference number: 4 (lower is better)
Translates to: RRHAFSWVGLVPWYMGEARPEPV*PSLGAT
Trigger: TGTAGCCCCCAGCGAGGGGCAGACTGGCTCTGGCCT...TGCTTCTCCCATGTACCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR GCA 90 bp CTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGCAGACTCCACAGCAGTaGCCATCTGGACAATGGGGC +
Preference number: 4 (lower is better)
Translates to: LSPAPRRHAFSWVGLVPWQTPQQ*PSGQWG
Trigger: GCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTG...CCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR GCA 90 bp CTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGCCTTTAACTTTCCCCTaGACCCCGCCGCCATGCCTT +
Preference number: 4 (lower is better)
Translates to: LSPAPRRHAFSWVGLVPWPLTFP*TPPPCL
Trigger: AAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGG...CCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CCA 90 bp CTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGTTTGCCTGCTCCAGGTaGGCGAGCTGTCATCCTCGT +
Preference number: 4 (lower is better)
Translates to: LSPAPRRHAFSWVGLVPWFACSR*ASCHPR
Trigger: ACGAGGATGACAGCTCGCCCACCTGGAGCAGGCAAA...CCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CCA 90 bp GGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCAGACTCCACAGCAGTGCCCATGACGGGACCTCTTCCTaGCTGCTCTGCCGGCGCAGG +
Preference number: 4 (lower is better)
Translates to: GGPGALVHGRSRLHSSAHDGTSS*LLCRRR
Trigger: CCTGCGCCGGCAGAGCAGCCAGGAAGAGGTCCCGTC...ATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTACCAGGGCACCAGGCCCACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CCA 90 bp GGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCAGACTCCACAGCAGTGCCCATGGCCCACATCCCCGTTaGCTCGGGGACGCACGTTCC +
Preference number: 4 (lower is better)
Translates to: GGPGALVHGRSRLHSSAHGPHPR*LGDARS
Trigger: GGAACGTGCGTCCCCGAGCCAACGGGGATGTGGGCC...ATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTACCAGGGCACCAGGCCCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR TCA 90 bp CCTCCTCACCCATCCTCTGTGAGAGGGCGGGGCCTGCTGTTTCCTGCAGCTGGGCTGGTCCAGGGCCTCTaGCTGCTCCACTTGGATCAG +
Preference number: 4 (lower is better)
Translates to: PPHPSSVRGRGLLFPAAGLVQGL*LLHLDQ
Trigger: CTGATCCAAGTGGAGCAGTCAGAGGCCCTGGACCAG...CCCAGCTGCAGGAAACAGCAGGCCCCGCCCTCTCACAGAGGATGGGTGAGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR TCA 90 bp CCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCAGACTCACCCATCCTCTGTaGGAGGGCGGGGCCTGCTGT +
Preference number: 4 (lower is better)
Translates to: PPCLQLGGPGALVHGRSRLTHPL*EGGACC
Trigger: ACAGCAGGCCCCGCCCTCTCACAGAGGATGGGTGAG...TCTGCTTCTCCCATGTACCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR TCA 90 bp TCCCTTTCACGAAAAAGAACCACCGTGAGCAACGTCCGCGACAGGCAGCCCTGGCCCTGGCTCCGCAGATaGGCCACGGCCCCGCTTCCA +
Preference number: 4 (lower is better)
Translates to: SLSRKRTTVSNVRDRQPWPWLRR*ATAPLP
Trigger: TGGAAGCGGGGCCGTGGCTCATCTGCGGAGCCAGGG...CCAGGGCTGCCTGTCGCGGACGTTGCTCACGGTGGTTCTTTTTCGTGAAAGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR GCA 90 bp CCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGGACCTCTTCCTGGCTaGTCTGCCGGCGCAGGCACT +
Preference number: 4 (lower is better)
Translates to: PLTFPCTPPPCLQLGGPGGPLPG*SAGAGT
Trigger: AGTGCCTGCGCCGGCAGAGCAGCCAGGAAGAGGTCC...ACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR GCA 90 bp AACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTTCCAGGGCCTCTGACTaGTCCACTTGGATCAGGGGG +
Preference number: 4 (lower is better)
Translates to: NFPLHPAAMPSVGWAWCPSRASD*STWIRG
Trigger: CCCCCTGATCCAAGTGGAGCAGTCAGAGGCCCTGGA...AGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR GCA 90 bp CCTCCTCACCCATCCTCTGTGAGAGGGCGGGGCCTGCTGTTTCCTGCAGCTGGGTCCAGGGCCTCTGACTaGTCCACTTGGATCAGGGGG +
Preference number: 4 (lower is better)
Translates to: PPHPSSVRGRGLLFPAAGSRASD*STWIRG
Trigger: CCCCCTGATCCAAGTGGAGCAGTCAGAGGCCCTGGA...CCCAGCTGCAGGAAACAGCAGGCCCCGCCCTCTCACAGAGGATGGGTGAGGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR GCA 90 bp GGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTGCAGGGACGGCAGGCTaGCGTTCACCTGGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: GEADSTAVPIWTMGQGRSAGTAG*RSPGPG
Trigger: CCCTGGACCAGGTGAACGGCAGCCTGCCGTCCCTGC...AGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR GCA 90 bp CCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCAGAGGGCCTGCTGTTTCCTaGAGCTGGGGCCGAGCGCAT +
Preference number: 4 (lower is better)
Translates to: PPCLQLGGPGALVHGRSRGPAVS*SWGRAH
Trigger: ATGCGCTCGGCCCCAGCTGCAGGAAACAGCAGGCCC...TCTGCTTCTCCCATGTACCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR GCA 90 bp GCTCCGCAGATGAGCCACGGCCCCGCTTCCACCTTCCGGAGGAGTGCTTTGCTTTCTGGACTGGGTCTCTaGAGAGAGCAGGGCCGGACG +
Preference number: 4 (lower is better)
Translates to: APQMSHGPASTFRRSALLSGLGL*REQGRT
Trigger: CGTCCGGCCCTGCTCTCTGCAGAGACCCAGTCCAGA...AAGCAAAGCACTCCTCCGGAAGGTGGAAGCGGGGCCGTGGCTCATCTGCGGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CCA 90 bp AGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTGGAGGAGTGGCTGCGGATaGGGTCCTCTGCGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: RSRLHSSAHLDNGAGQVWRSGCG*GPLRPG
Trigger: CCCTGGCCGCAGAGGACCCCATCCGCAGCCACTCCT...CCAGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CCA 90 bp GAGCTGCGGTGCAGGGACGGCAGGCTGCCGTTCACCTGGTCCAGGGCCTCTGACGTCACAGAGCTTCCCTaGGAGACAGGCCAGCATGAT +
Preference number: 4 (lower is better)
Translates to: ELRCRDGRLPFTWSRASDVTELP*ETGQHD
Trigger: ATCATGCTGGCCTGTCTCCCAGGGAAGCTCTGTGAC...GTCAGAGGCCCTGGACCAGGTGAACGGCAGCCTGCCGTCCCTGCACCGCAGCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636448.1
CDS-3UTR CCA 90 bp CCTCCTCACCCATCCTCTGTGAGAGGGCGGGGCCTGCTGTTTCCTGCAGCTGGGGCAGGGGACGGTGGGTaGTATTGGTCTGCTGAAGGG +
Preference number: 4 (lower is better)
Translates to: PPHPSSVRGRGLLFPAAGAGDGG*YWSAEG
Trigger: CCCTTCAGCAGACCAATACCACCCACCGTCCCCTGC...CCCAGCTGCAGGAAACAGCAGGCCCCGCCCTCTCACAGAGGATGGGTGAGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CCA 90 bp CGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCAGGTGGGATGCTGGGGTaGGAGGTAGTAGGCGTCTCC +
Preference number: 4 (lower is better)
Translates to: RRHAFSWVGLVPWYMGEAGGMLG*EVVGVS
Trigger: GGAGACGCCTACTACCTCCCACCCCAGCATCCCACC...TGCTTCTCCCATGTACCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CCA 90 bp GGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTGACGGGACCTCTTCCTaGCTGCTCTGCCGGCGCAGG +
Preference number: 4 (lower is better)
Translates to: GEADSTAVPIWTMGQGRSDGTSS*LLCRRR
Trigger: CCTGCGCCGGCAGAGCAGCCAGGAAGAGGTCCCGTC...AGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CCA 90 bp ACCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGGGCAGGGCCGTGCGATaGGGGAAGATGGGAGACGAC +
Preference number: 4 (lower is better)
Translates to: TFNFPLHPAAMPSVGWAWGRAVR*GKMGDD
Trigger: GTCGTCTCCCATCTTCCCCCATCGCACGGCCCTGCC...CCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CCA 90 bp GGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTGTAGGGAGGGGTTGCTaGAGGGGTGGCCCACGACCG +
Preference number: 4 (lower is better)
Translates to: GEADSTAVPIWTMGQGRSVGRGC*RGGPRP
Trigger: CGGTCGTGGGCCACCCCTCCAGCAACCCCTCCCTAC...AGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CCA 90 bp CGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCAAGGCTGCCGTTCACCTaGTCCAGGGCCTCTGACTGC +
Preference number: 4 (lower is better)
Translates to: RRHAFSWVGLVPWYMGEARLPFT*SRASDC
Trigger: GCAGTCAGAGGCCCTGGACCAGGTGAACGGCAGCCT...TGCTTCTCCCATGTACCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CCA 90 bp CCTCCTCACCCATCCTCTGTGAGAGGGCGGGGCCTGCTGTTTCCTGCAGCTGGGATCCCTCCCAGGGTCTaGCTCTTCGTCGCTGTAGCC +
Preference number: 4 (lower is better)
Translates to: PPHPSSVRGRGLLFPAAGIPPRV*LFVAVA
Trigger: GGCTACAGCGACGAAGAGCCAGACCCTGGGAGGGAT...CCCAGCTGCAGGAAACAGCAGGCCCCGCCCTCTCACAGAGGATGGGTGAGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CCA 90 bp CGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCATGCCCATCTGGACAATaGGGCAGGGCAGGTCTGGCC +
Preference number: 4 (lower is better)
Translates to: RRHAFSWVGLVPWYMGEACPSGQ*GRAGLA
Trigger: GGCCAGACCTGCCCTGCCCCATTGTCCAGATGGGCA...TGCTTCTCCCATGTACCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CCA 90 bp CCTCCTCACCCATCCTCTGTGAGAGGGCGGGGCCTGCTGTTTCCTGCAGCTGGGACAGCAGTGCCCATCTaGACAATGGGGCAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: PPHPSSVRGRGLLFPAAGTAVPI*TMGQGR
Trigger: CCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGT...CCCAGCTGCAGGAAACAGCAGGCCCCGCCCTCTCACAGAGGATGGGTGAGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CCA 90 bp CCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCAGACGCCATGCCTTCAGTTaGGTGGGCCTGGTGCCCTGG +
Preference number: 4 (lower is better)
Translates to: PPCLQLGGPGALVHGRSRRHAFS*VGLVPW
Trigger: CCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCG...TCTGCTTCTCCCATGTACCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CCA 90 bp ACCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGCGCCATGCCTTCAGTTaGGTGGGCCTGGTGCCCTGG +
Preference number: 4 (lower is better)
Translates to: TFNFPLHPAAMPSVGWAWRHAFS*VGLVPW
Trigger: CCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCG...CCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR TCA 90 bp GGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTATAGTCCTGCCGGTGTaGGAGGGGGCCCACATCCCC +
Preference number: 4 (lower is better)
Translates to: GEADSTAVPIWTMGQGRSIVLPV*EGAHIP
Trigger: GGGGATGTGGGCCCCCTCTCACACCGGCAGGACTAT...AGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR TCA 90 bp ATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGATAGTCCTGCCGGTGTaGGAGGGGGCCCACATCCCC +
Preference number: 4 (lower is better)
Translates to: MGEADSTAVPIWTMGQGRIVLPV*EGAHIP
Trigger: GGGGATGTGGGCCCCCTCTCACACCGGCAGGACTAT...CCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR TCA 90 bp CTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGCAGTTGCCCTTAGCGTaGCAGTCAGAAACCGACCAT +
Preference number: 4 (lower is better)
Translates to: LSPAPRRHAFSWVGLVPWQLPLA*QSETDH
Trigger: ATGGTCGGTTTCTGACTGTCACGCTAAGGGCAACTG...CCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR GCA 90 bp TCATCACCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGGTGTGCAGGGCACTGTaGTGGGCGTTGAGGCGGGGG +
Preference number: 4 (lower is better)
Translates to: SSPLTFPCTPPPCLQLGGVCRAL*WALRRG
Trigger: CCCCCGCCTCAACGCCCAGCACAGTGCCCTGCACAC...CCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGGTGATGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR GCA 90 bp ATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCAGACTCCACCGGTAGGGAGGGGTTaGTGGAGGGGTGGCCCACGA +
Preference number: 4 (lower is better)
Translates to: MPSVGWAWCPGTWEKQTPPVGRG*WRGGPR
Trigger: TCGTGGGCCACCCCTCCAGCAACCCCTCCCTACCGG...TGGAGTCTGCTTCTCCCATGTACCAGGGCACCAGGCCCACCCAACTGAAGGCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR GCA 90 bp ATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCAGACTCCATACCAGGAGCTGCGGTaGAGGGACGGCAGGCTGCCG +
Preference number: 4 (lower is better)
Translates to: MPSVGWAWCPGTWEKQTPYQELR*RDGRLP
Trigger: CGGCAGCCTGCCGTCCCTGCACCGCAGCTCCTGGTA...TGGAGTCTGCTTCTCCCATGTACCAGGGCACCAGGCCCACCCAACTGAAGGCAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR GCA 90 bp GCGCCGAGGGGCCTGTCAGTCTTTGGGAGTTCGGGCAAACTAGGGATGCAGGACTCTGGACTGGGTCTCTaGAGAGAGCAGGGCCGGACG +
Preference number: 4 (lower is better)
Translates to: APRGLSVFGSSGKLGMQDSGLGL*REQGRT
Trigger: CGTCCGGCCCTGCTCTCTGCAGAGACCCAGTCCAGA...GTCCTGCATCCCTAGTTTGCCCGAACTCCCAAAGACTGACAGGCCCCTCGGCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CCA 90 bp CTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGGAGGTGCTCATAGTTTaGGCAGCCTTGGCCTGTCTA +
Preference number: 4 (lower is better)
Translates to: LSPAPRRHAFSWVGLVPWEVLIV*AALACL
Trigger: TAGACAGGCCAAGGCTGCCCAAACTATGAGCACCTC...CCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CCA 90 bp CTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGGGGCAGGTCGGCTGTTaGACGAGTTACCCTGTTTTT +
Preference number: 4 (lower is better)
Translates to: LSPAPRRHAFSWVGLVPWGQVGC*TSYPVF
Trigger: AAAAACAGGGTAACTCGTCCAACAGCCGACCTGCCC...CCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CCA 90 bp CTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGTTCCTCTTCCCCTACTaGCACATCGCAAGGCGGATA +
Preference number: 4 (lower is better)
Translates to: LSPAPRRHAFSWVGLVPWFLFPY*HIARRI
Trigger: TATCCGCCTTGCGATGTGCCAGTAGGGGAAGAGGAA...CCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CCA 90 bp AACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTTGGTTGATGAGCTTGTaGCAGCCTACGCGGATCGGG +
Preference number: 4 (lower is better)
Translates to: NFPLHPAAMPSVGWAWCPWLMSL*QPTRIG
Trigger: CCCGATCCGCGTAGGCTGCCACAAGCTCATCAACCA...AGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CCA 90 bp ATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCAGACTCCAAGGAGTGGCTGCGGATaGGGTCCTCTGCGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: MPSVGWAWCPGTWEKQTPRSGCG*GPLRPG
Trigger: CCCTGGCCGCAGAGGACCCCATCCGCAGCCACTCCT...TGGAGTCTGCTTCTCCCATGTACCAGGGCACCAGGCCCACCCAACTGAAGGCAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CCA 90 bp TACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCGACGGGACCTCTTCCTaGCTGCTCTGCCGGCGCAGG +
Preference number: 4 (lower is better)
Translates to: YMGEADSTAVPIWTMGQGDGTSS*LLCRRR
Trigger: CCTGCGCCGGCAGAGCAGCCAGGAAGAGGTCCCGTC...GCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CCA 90 bp AGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTGGGGCAGGGCCGTGCGATaGGGGAAGATGGGAGACGAC +
Preference number: 4 (lower is better)
Translates to: RSRLHSSAHLDNGAGQVWGRAVR*GKMGDD
Trigger: GTCGTCTCCCATCTTCCCCCATCGCACGGCCCTGCC...CCAGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CCA 90 bp AACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTATGCCTTCAGTTGGGTaGGCCTGGTGCCCTGGTACA +
Preference number: 4 (lower is better)
Translates to: NFPLHPAAMPSVGWAWCPMPSVG*AWCPGT
Trigger: TGTACCAGGGCACCAGGCCCACCCAACTGAAGGCAT...AGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CCA 90 bp GGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTCGCCATGCCTTCAGTTaGGTGGGCCTGGTGCCCTGG +
Preference number: 4 (lower is better)
Translates to: GEADSTAVPIWTMGQGRSRHAFS*VGLVPW
Trigger: CCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCG...AGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CCA 90 bp GCTCCGCAGATGAGCCACGGCCCCGCTTCCACCTTCCGGAGGAGTGCTTTGCTTGAGGAGTGCTTTGCTTaGAAGGGGTCTCCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: APQMSHGPASTFRRSALLEECFA*KGSPWG
Trigger: GCCCCAGGGAGACCCCTTCCAAGCAAAGCACTCCTC...AAGCAAAGCACTCCTCCGGAAGGTGGAAGCGGGGCCGTGGCTCATCTGCGGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR TCA 90 bp GCTCCGCAGATGAGCCACGGCCCCGCTTCCACCTTCCGGAGGAGTGCTTTGCTTGATTTTGAGATGGCTTaGCCCCACCGCCGACACCCA +
Preference number: 4 (lower is better)
Translates to: APQMSHGPASTFRRSALLDFEMA*PHRRHP
Trigger: TGGGTGTCGGCGGTGGGGTCAAGCCATCTCAAAATC...AAGCAAAGCACTCCTCCGGAAGGTGGAAGCGGGGCCGTGGCTCATCTGCGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000640483.1
CDS-3UTR TCA 90 bp CGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCAGCAGGCACTCAAAGTTaGAGGAGGATCTCCGGTGGG +
Preference number: 4 (lower is better)
Translates to: RRHAFSWVGLVPWYMGEAAGTQS*RRISGG
Trigger: CCCACCGGAGATCCTCCTTCAACTTTGAGTGCCTGC...TGCTTCTCCCATGTACCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR TCA 90 bp CCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCAGACTGGTCCAGGGCCTCTaGCTGCTCCACTTGGATCAG +
Preference number: 4 (lower is better)
Translates to: PPCLQLGGPGALVHGRSRLVQGL*LLHLDQ
Trigger: CTGATCCAAGTGGAGCAGTCAGAGGCCCTGGACCAG...TCTGCTTCTCCCATGTACCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR TCA 90 bp AACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTTCAGGCTGGCTGGTGTaGAAGTCCGGTAGGAGATGT +
Preference number: 4 (lower is better)
Translates to: NFPLHPAAMPSVGWAWCPSGWLV*KSGRRC
Trigger: ACATCTCCTACCGGACTTTCACACCAGCCAGCCTGA...AGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR TCA 90 bp ACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAATAGTCCTGCCGGTGTaGGAGGGGGCCCACATCCCC +
Preference number: 4 (lower is better)
Translates to: TWEKQTPQQCPSGQWGRAIVLPV*EGAHIP
Trigger: GGGGATGTGGGCCCCCTCTCACACCGGCAGGACTAT...TGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR TCA 90 bp CCTGGTACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCATAGTCCTGCCGGTGTaGGAGGGGGCCCACATCCCC +
Preference number: 4 (lower is better)
Translates to: PGTWEKQTPQQCPSGQWGIVLPV*EGAHIP
Trigger: GGGGATGTGGGCCCCCTCTCACACCGGCAGGACTAT...GCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTACCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR TCA 90 bp CCTCCTCACCCATCCTCTGTGAGAGGGCGGGGCCTGCTGTTTCCTGCAGCTGGGGTTGGGCCCAGTGACTaGTATGCTAGACCGATGGCT +
Preference number: 4 (lower is better)
Translates to: PPHPSSVRGRGLLFPAAGVGPSD*YARPMA
Trigger: AGCCATCGGTCTAGCATATCAGTCACTGGGCCCAAC...CCCAGCTGCAGGAAACAGCAGGCCCCGCCCTCTCACAGAGGATGGGTGAGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR TCA 90 bp AACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGCTCTCACTGGCAAATaGCAGCTCTGTGCAAGGAGC +
Preference number: 4 (lower is better)
Translates to: NFPLHPAAMPSVGWAWCPALTGK*QLCARS
Trigger: GCTCCTTGCACAGAGCTGTCATTTGCCAGTGAGAGC...AGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR GCA 90 bp CCTTCCGGAGGAGTGCTTTGCTTGGAAGGGGTCTCCCTGGGGCCTTGGGTCTGCCCAGGCCTCACCTGTTaGACACCTGAAGAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: PSGGVLCLEGVSLGPWVCPGLTC*TPEEQQ
Trigger: CTGCTGCTCTTCAGGTGTGCAACAGGTGAGGCCTGG...GCAGACCCAAGGCCCCAGGGAGACCCCTTCCAAGCAAAGCACTCCTCCGGAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR GCA 90 bp CGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCAGCTCAAGGTTCCCAATaGTGGGCCGCTTTCCATGGG +
Preference number: 4 (lower is better)
Translates to: RRHAFSWVGLVPWYMGEAAQGSQ*WAAFHG
Trigger: CCCATGGAAAGCGGCCCAGCATTGGGAACCTTGAGC...TGCTTCTCCCATGTACCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR GCA 90 bp CTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGGCCATGATCTGTTGCTaGATTAGATGCAGAGGCAGG +
Preference number: 4 (lower is better)
Translates to: LSPAPRRHAFSWVGLVPWAMICC*IRCRGR
Trigger: CCTGCCTCTGCATCTAATGCAGCAACAGATCATGGC...CCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR GCA 90 bp CCTGGTACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCCTGTGTACCAGGAGCTaGGGTGCAGGGACGGCAGGC +
Preference number: 4 (lower is better)
Translates to: PGTWEKQTPQQCPSGQWGLCTRS*GAGTAG
Trigger: GCCTGCCGTCCCTGCACCGCAGCTCCTGGTACACAG...GCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTACCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR GCA 90 bp CTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGCTGTCCGCACTCCTCTaGTTGTCGCTGTTTTTGTTC +
Preference number: 4 (lower is better)
Translates to: LSPAPRRHAFSWVGLVPWLSALL*LSLFLF
Trigger: GAACAAAAACAGCGACAAGCAGAGGAGTGCGGACAG...CCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR GCA 90 bp AACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTAAGCAGGGTGCTGGCTaGACTCTCCATCTCGTCGAT +
Preference number: 4 (lower is better)
Translates to: NFPLHPAAMPSVGWAWCPKQGAG*TLHLVD
Trigger: ATCGACGAGATGGAGAGTGCAGCCAGCACCCTGCTT...AGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR GCA 90 bp TACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGCCAGAGCCAGTCTaGCCCTCGCTGGGGGCTACA +
Preference number: 4 (lower is better)
Translates to: YMGEADSTAVPIWTMGQGRPEPV*PSLGAT
Trigger: TGTAGCCCCCAGCGAGGGGCAGACTGGCTCTGGCCT...GCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR GCA 90 bp TCATCACCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGAGGCCAGAGCCAGTCTaGCCCTCGCTGGGGGCTACA +
Preference number: 4 (lower is better)
Translates to: SSPLTFPCTPPPCLQLGGRPEPV*PSLGAT
Trigger: TGTAGCCCCCAGCGAGGGGCAGACTGGCTCTGGCCT...CCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGGTGATGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR GCA 90 bp ACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGGCCTGCTGTTTCCTaGAGCTGGGGCCGAGCGCAT +
Preference number: 4 (lower is better)
Translates to: TWEKQTPQQCPSGQWGRAGPAVS*SWGRAH
Trigger: ATGCGCTCGGCCCCAGCTGCAGGAAACAGCAGGCCC...TGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR GCA 90 bp GCTCCGCAGATGAGCCACGGCCCCGCTTCCACCTTCCGGAGGAGTGCTTTGCTTTCCGGAGGAGTGCTTTaGTTGGAAGGGGTCTCCCTG +
Preference number: 4 (lower is better)
Translates to: APQMSHGPASTFRRSALLSGGVL*LEGVSL
Trigger: CAGGGAGACCCCTTCCAAGCAAAGCACTCCTCCGGA...AAGCAAAGCACTCCTCCGGAAGGTGGAAGCGGGGCCGTGGCTCATCTGCGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR GCA 90 bp GCGCCGAGGGGCCTGTCAGTCTTTGGGAGTTCGGGCAAACTAGGGATGCAGGACTCTCTGTGGGGCAGCTaGCCCCCTCCTTTGCTCTCT +
Preference number: 4 (lower is better)
Translates to: APRGLSVFGSSGKLGMQDSLWGS*PPPLLS
Trigger: AGAGAGCAAAGGAGGGGGGCAGCTGCCCCACAGAGA...GTCCTGCATCCCTAGTTTGCCCGAACTCCCAAAGACTGACAGGCCCCTCGGCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CCA 90 bp ATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGGAGGCGGGGGCGGAATaGGGAAGGGGATCACCAAGA +
Preference number: 4 (lower is better)
Translates to: MGEADSTAVPIWTMGQGREAGAE*GRGSPR
Trigger: TCTTGGTGATCCCCTTCCCCATTCCGCCCCCGCCTC...CCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR CCA 90 bp GCGCCGAGGGGCCTGTCAGTCTTTGGGAGTTCGGGCAAACTAGGGATGCAGGACTTTGCCTCGTTCGCGTaGTCCGCTTGCTGCTGCCGT +
Preference number: 4 (lower is better)
Translates to: APRGLSVFGSSGKLGMQDFASFA*SACCCR
Trigger: ACGGCAGCAGCAAGCGGACCACGCGAACGAGGCAAA...GTCCTGCATCCCTAGTTTGCCCGAACTCCCAAAGACTGACAGGCCCCTCGGCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR CCA 90 bp CCTCCTCACCCATCCTCTGTGAGAGGGCGGGGCCTGCTGTTTCCTGCAGCTGGGGTCACAGAGCTTCCCTaGGAGACAGGCCAGCATGAT +
Preference number: 4 (lower is better)
Translates to: PPHPSSVRGRGLLFPAAGVTELP*ETGQHD
Trigger: ATCATGCTGGCCTGTCTCCCAGGGAAGCTCTGTGAC...CCCAGCTGCAGGAAACAGCAGGCCCCGCCCTCTCACAGAGGATGGGTGAGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CCA 90 bp CTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGCCTGTAGGGCAATTGTaGTGTTCTTCGCAGGGTACT +
Preference number: 4 (lower is better)
Translates to: LSPAPRRHAFSWVGLVPWPVGQL*CSSQGT
Trigger: AGTACCCTGCGAAGAACACCACAATTGCCCTACAGG...CCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CCA 90 bp GAGCTGCGGTGCAGGGACGGCAGGCTGCCGTTCACCTGGTCCAGGGCCTCTGACCCTGTAGGGCAATTGTaGTGTTCTTCGCAGGGTACT +
Preference number: 4 (lower is better)
Translates to: ELRCRDGRLPFTWSRASDPVGQL*CSSQGT
Trigger: AGTACCCTGCGAAGAACACCACAATTGCCCTACAGG...GTCAGAGGCCCTGGACCAGGTGAACGGCAGCCTGCCGTCCCTGCACCGCAGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636448.1
CDS-3UTR CCA 90 bp CCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTAAGGAGGATCTCCGGTaGGATGCTGGGGTGGGAGGT +
Preference number: 4 (lower is better)
Translates to: PLTFPCTPPPCLQLGGPGKEDLR*DAGVGG
Trigger: ACCTCCCACCCCAGCATCCCACCGGAGATCCTCCTT...ACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CCA 90 bp CGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCATGCGATGGGGGAAGATaGGAGACGACGGGACCTCTT +
Preference number: 4 (lower is better)
Translates to: RRHAFSWVGLVPWYMGEACDGGR*ETTGPL
Trigger: AAGAGGTCCCGTCGTCTCCCATCTTCCCCCATCGCA...TGCTTCTCCCATGTACCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CCA 90 bp CCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTTGTTCCGGAAGCTGCTaGGGACAGTCAGGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: PLTFPCTPPPCLQLGGPGCSGSC*GQSGWL
Trigger: CAGCCAGCCTGACTGTCCCCAGCAGCTTCCGGAACA...ACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CCA 90 bp AGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTGGCTGGGGCCGAGCGCATaGTACTCTGCCAGGCTCAAC +
Preference number: 4 (lower is better)
Translates to: RSRLHSSAHLDNGAGQVWLGPSA*YSARLN
Trigger: GTTGAGCCTGGCAGAGTACCATGCGCTCGGCCCCAG...CCAGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CCA 90 bp ACCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGGCTGTTTCCTGCAGCTaGGGCCGAGCGCATGGTACT +
Preference number: 4 (lower is better)
Translates to: TFNFPLHPAAMPSVGWAWAVSCS*GRAHGT
Trigger: AGTACCATGCGCTCGGCCCCAGCTGCAGGAAACAGC...CCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CCA 90 bp ATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTGCCCATCTGGACAATaGGGCAGGGCAGGTCTGGCC +
Preference number: 4 (lower is better)
Translates to: MGEADSTAVPIWTMGQGRCPSGQ*GRAGLA
Trigger: GGCCAGACCTGCCCTGCCCCATTGTCCAGATGGGCA...CCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CCA 90 bp CCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTACAGCAGTGCCCATCTaGACAATGGGGCAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: PLTFPCTPPPCLQLGGPGTAVPI*TMGQGR
Trigger: CCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGT...ACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CCA 90 bp CCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTTCAGTTGGGTGGGCCTaGTGCCCTGGTACATGGGAG +
Preference number: 4 (lower is better)
Translates to: PLTFPCTPPPCLQLGGPGSVGWA*CPGTWE
Trigger: CTCCCATGTACCAGGGCACCAGGCCCACCCAACTGA...ACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CCA 90 bp GGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCAGACTCCACAGCAGTGCCCATTCAGTTGGGTGGGCCTaGTGCCCTGGTACATGGGAG +
Preference number: 4 (lower is better)
Translates to: GGPGALVHGRSRLHSSAHSVGWA*CPGTWE
Trigger: CTCCCATGTACCAGGGCACCAGGCCCACCCAACTGA...ATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTACCAGGGCACCAGGCCCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CCA 90 bp ACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCACGCCATGCCTTCAGTTaGGTGGGCCTGGTGCCCTGG +
Preference number: 4 (lower is better)
Translates to: TWEKQTPQQCPSGQWGRARHAFS*VGLVPW
Trigger: CCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCG...TGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CCA 90 bp CCTCCTCACCCATCCTCTGTGAGAGGGCGGGGCCTGCTGTTTCCTGCAGCTGGGGGCAGAGCAGCCAGCTaGACCTGCTCTGTAATTCAC +
Preference number: 4 (lower is better)
Translates to: PPHPSSVRGRGLLFPAAGGRAAS*TCSVIH
Trigger: GTGAATTACAGAGCAGGTCCAGCTGGCTGCTCTGCC...CCCAGCTGCAGGAAACAGCAGGCCCCGCCCTCTCACAGAGGATGGGTGAGGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR CCA 90 bp CCTTCCGGAGGAGTGCTTTGCTTGGAAGGGGTCTCCCTGGGGCCTTGGGTCTGCTGGAAGGGGTCTCCCTaGGGCCTTGGGTCTGCTTTT +
Preference number: 4 (lower is better)
Translates to: PSGGVLCLEGVSLGPWVCWKGSP*GLGSAF
Trigger: AAAAGCAGACCCAAGGCCCCAGGGAGACCCCTTCCA...GCAGACCCAAGGCCCCAGGGAGACCCCTTCCAAGCAAAGCACTCCTCCGGAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CCA 90 bp TCCACCTTCCGGAGGAGTGCTTTGCTTGGAAGGGGTCTCCCTGGGGCCTTGGGTGAGGAGTGCTTTGCTTaGAAGGGGTCTCCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: STFRRSALLGRGLPGALGEECFA*KGSPWG
Trigger: GCCCCAGGGAGACCCCTTCCAAGCAAAGCACTCCTC...ACCCAAGGCCCCAGGGAGACCCCTTCCAAGCAAAGCACTCCTCCGGAAGGTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
3UTR CAA 72 bp TTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTaGGGTGGGCCTGGTGCCCTGGTACATGGGAGAAGC +
Preference number: 4 (lower is better)
Translates to: LTFPCTPPPCLQ*GGPGALVHGRS
Trigger: GCTTCTCCCATGTACCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
3UTR CAA 72 bp TCTTCCTGGCTGCTCTGCCGGCGCAGGCACTCAAAGTaGAAGGAGGATCTCCGGTGGGATGCTGGGGTGGGA +
Preference number: 4 (lower is better)
Translates to: SSWLLCRRRHSK*KEDLRWDAGVG
Trigger: TCCCACCCCAGCATCCCACCGGAGATCCTCCTTCAACTTTGAGTGCCTGCGCCGGCAGAGCAGCCAGGAAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636448.1
CDS-3UTR TCA 90 bp CCTCCTCACCCATCCTCTGTGAGAGGGCGGGGCCTGCTGTTTCCTGCAGCTGGGTACATCTTCTGCGATTaGATCGGTTCCAGCGACGCC +
Preference number: 4 (lower is better)
Translates to: PPHPSSVRGRGLLFPAAGYIFCD*IGSSDA
Trigger: GGCGTCGCTGGAACCGATTCAATCGCAGAAGATGTA...CCCAGCTGCAGGAAACAGCAGGCCCCGCCCTCTCACAGAGGATGGGTGAGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR TCA 90 bp AACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTTACATCTTCTGCGATTaGATCGGTTCCAGCGACGCC +
Preference number: 4 (lower is better)
Translates to: NFPLHPAAMPSVGWAWCPYIFCD*IGSSDA
Trigger: GGCGTCGCTGGAACCGATTCAATCGCAGAAGATGTA...AGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR TCA 90 bp GCGCCGAGGGGCCTGTCAGTCTTTGGGAGTTCGGGCAAACTAGGGATGCAGGACGGCCCCCGTAAGCCATaGTGCCATCGTACATCACAG +
Preference number: 4 (lower is better)
Translates to: APRGLSVFGSSGKLGMQDGPRKP*CHRTSQ
Trigger: CTGTGATGTACGATGGCATCATGGCTTACGGGGGCC...GTCCTGCATCCCTAGTTTGCCCGAACTCCCAAAGACTGACAGGCCCCTCGGCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR TCA 90 bp GCGCCGAGGGGCCTGTCAGTCTTTGGGAGTTCGGGCAAACTAGGGATGCAGGACGCAGACGATCATTCCTaGAGAGGATGGGCCCCCGTA +
Preference number: 4 (lower is better)
Translates to: APRGLSVFGSSGKLGMQDADDHS*RGWAPV
Trigger: TACGGGGGCCCATCCTCTTCAGGAATGATCGTCTGC...GTCCTGCATCCCTAGTTTGCCCGAACTCCCAAAGACTGACAGGCCCCTCGGCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR TCA 90 bp CCTCCTCACCCATCCTCTGTGAGAGGGCGGGGCCTGCTGTTTCCTGCAGCTGGGTGCTGCCGATTACGATaGGGGAGTCAAACGTGTTCC +
Preference number: 4 (lower is better)
Translates to: PPHPSSVRGRGLLFPAAGCCRLR*GSQTCS
Trigger: GGAACACGTTTGACTCCCTCATCGTAATCGGCAGCA...CCCAGCTGCAGGAAACAGCAGGCCCCGCCCTCTCACAGAGGATGGGTGAGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR TCA 90 bp CGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCACCCGGGGTTGTAATCTaGCTCAGGGTCACAGAGCTT +
Preference number: 4 (lower is better)
Translates to: RRHAFSWVGLVPWYMGEAPGVVI*LRVTEL
Trigger: AAGCTCTGTGACCCTGAGTCAGATTACAACCCCGGG...TGCTTCTCCCATGTACCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR TCA 90 bp CCTTCCGGAGGAGTGCTTTGCTTGGAAGGGGTCTCCCTGGGGCCTTGGGTCTGCCCCGGGGTTGTAATCTaGCTCAGGGTCACAGAGCTT +
Preference number: 4 (lower is better)
Translates to: PSGGVLCLEGVSLGPWVCPGVVI*LRVTEL
Trigger: AAGCTCTGTGACCCTGAGTCAGATTACAACCCCGGG...GCAGACCCAAGGCCCCAGGGAGACCCCTTCCAAGCAAAGCACTCCTCCGGAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR TCA 90 bp CTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGGAGCTGTTCATCTCCTaGGTCGGACCTAATGTAAGT +
Preference number: 4 (lower is better)
Translates to: LSPAPRRHAFSWVGLVPWELFIS*VGPNVS
Trigger: ACTTACATTAGGTCCGACTCAGGAGATGAACAGCTC...CCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR TCA 90 bp AACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTCCTTGGAGATCTCCGTaGATCATAGCAAACGGGCGA +
Preference number: 4 (lower is better)
Translates to: NFPLHPAAMPSVGWAWCPPWRSP*IIANGR
Trigger: TCGCCCGTTTGCTATGATTCACGGAGATCTCCAAGG...AGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR TCA 90 bp GAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTGCACGACCGGGTCGAGTaGCTCGGTGAGTACTTCTGG +
Preference number: 4 (lower is better)
Translates to: EKQTPQQCPSGQWGRAGLHDRVE*LGEYFW
Trigger: CCAGAAGTACTCACCGAGTCACTCGACCCGGTCGTG...CAGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR TCA 90 bp ACCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGCCATCTCGTCGATGGTaGGGTCACAGGCATCAGCGA +
Preference number: 4 (lower is better)
Translates to: TFNFPLHPAAMPSVGWAWPSRRW*GHRHQR
Trigger: TCGCTGATGCCTGTGACCTCACCATCGACGAGATGG...CCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR TCA 90 bp CCTCCTCACCCATCCTCTGTGAGAGGGCGGGGCCTGCTGTTTCCTGCAGCTGGGCTGGCAATTTTGGCCTaGTGTGATGCCACAAGACCC +
Preference number: 4 (lower is better)
Translates to: PPHPSSVRGRGLLFPAAGLAILA*CDATRP
Trigger: GGGTCTTGTGGCATCACATCAGGCCAAAATTGCCAG...CCCAGCTGCAGGAAACAGCAGGCCCCGCCCTCTCACAGAGGATGGGTGAGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR GCA 90 bp AACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTTCCTACAGGTGGGGGTaGAGAGGTGCTCATAGTTTG +
Preference number: 4 (lower is better)
Translates to: NFPLHPAAMPSVGWAWCPSYRWG*RGAHSL
Trigger: CAAACTATGAGCACCTCTGCACCCCCACCTGTAGGA...AGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR GCA 90 bp AACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTAGGATGCCACTAAGTTaGTCAGGGAAGTCCAGTGCC +
Preference number: 4 (lower is better)
Translates to: NFPLHPAAMPSVGWAWCPRMPLS*SGKSSA
Trigger: GGCACTGGACTTCCCTGAGCAACTTAGTGGCATCCT...AGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR GCA 90 bp CCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCAGACCAGGCCTCACCTGTTaGACACCTGAAGAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: PPCLQLGGPGALVHGRSRPGLTC*TPEEQQ
Trigger: CTGCTGCTCTTCAGGTGTGCAACAGGTGAGGCCTGG...TCTGCTTCTCCCATGTACCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR GCA 90 bp CTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGAGTTCTTCATTAGCTTaGTCCAGGTTCCCTTCGGTC +
Preference number: 4 (lower is better)
Translates to: LSPAPRRHAFSWVGLVPWSSSLA*SRFPSV
Trigger: GACCGAAGGGAACCTGGAGCAAGCTAATGAAGAACT...CCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR GCA 90 bp AGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTGGGTTGGGTGGGCCTGGTaGCCTGGTACATGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: RSRLHSSAHLDNGAGQVWVGWAW*PGTWEK
Trigger: CTTCTCCCATGTACCAGGGCACCAGGCCCACCCAAC...CCAGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR GCA 90 bp GAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTGGTTGGGTGGGCCTGGTaGCCTGGTACATGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: EKQTPQQCPSGQWGRAGLVGWAW*PGTWEK
Trigger: CTTCTCCCATGTACCAGGGCACCAGGCCCACCCAAC...CAGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR GCA 90 bp ACCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGCCTTTAACTTTCCCCTaGACCCCGCCGCCATGCCTT +
Preference number: 4 (lower is better)
Translates to: TFNFPLHPAAMPSVGWAWPLTFP*TPPPCL
Trigger: AAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGG...CCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CCA 90 bp ACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGAGGCGGGGGCGGAATaGGGAAGGGGATCACCAAGA +
Preference number: 4 (lower is better)
Translates to: TWEKQTPQQCPSGQWGRAEAGAE*GRGSPR
Trigger: TCTTGGTGATCCCCTTCCCCATTCCGCCCCCGCCTC...TGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR CCA 90 bp ATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTTTGCCTCGTTCGCGTaGTCCGCTTGCTGCTGCCGT +
Preference number: 4 (lower is better)
Translates to: MGEADSTAVPIWTMGQGRFASFA*SACCCR
Trigger: ACGGCAGCAGCAAGCGGACCACGCGAACGAGGCAAA...CCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CCA 90 bp GGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTTTTGCCTCGTTCGCGTaGTCCGCTTGCTGCTGCCGT +
Preference number: 4 (lower is better)
Translates to: GEADSTAVPIWTMGQGRSFASFA*SACCCR
Trigger: ACGGCAGCAGCAAGCGGACCACGCGAACGAGGCAAA...AGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CCA 90 bp AACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGAACGCACATGGAGCTaGGTCCTCTTCAGCTACGAT +
Preference number: 4 (lower is better)
Translates to: NFPLHPAAMPSVGWAWCPERTWS*VLFSYD
Trigger: ATCGTAGCTGAAGAGGACCCAGCTCCATGTGCGTTC...AGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CCA 90 bp AACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTCCATTGGCAGTACACTaGCGTCCATTCCCTGAGAAC +
Preference number: 4 (lower is better)
Translates to: NFPLHPAAMPSVGWAWCPPLAVH*RPFPEN
Trigger: GTTCTCAGGGAATGGACGCCAGTGTACTGCCAATGG...AGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CCA 90 bp CTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGCTCCATTCGAGTCGATaGCTTTATACAGCAACGCAG +
Preference number: 4 (lower is better)
Translates to: LSPAPRRHAFSWVGLVPWLHSSR*LYTATQ
Trigger: CTGCGTTGCTGTATAAAGCCATCGACTCGAATGGAG...CCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CCA 90 bp CCTTCCGGAGGAGTGCTTTGCTTGGAAGGGGTCTCCCTGGGGCCTTGGGTCTGCGTCACAGAGCTTCCCTaGGAGACAGGCCAGCATGAT +
Preference number: 4 (lower is better)
Translates to: PSGGVLCLEGVSLGPWVCVTELP*ETGQHD
Trigger: ATCATGCTGGCCTGTCTCCCAGGGAAGCTCTGTGAC...GCAGACCCAAGGCCCCAGGGAGACCCCTTCCAAGCAAAGCACTCCTCCGGAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CCA 90 bp GAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTGAACCCCAGGGGAGGCTaGATGCGTCGAAGCAGAGTG +
Preference number: 4 (lower is better)
Translates to: EKQTPQQCPSGQWGRAGLNPRGG*MRRSRV
Trigger: CACTCTGCTTCGACGCATCCAGCCTCCCCTGGGGTT...CAGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CCA 90 bp AGCGCCGAGGGGCCTGTCAGTCTTTGGGAGTTCGGGCAAACTAGGGATGCAGGAAACCCCAGGGGAGGCTaGATGCGTCGAAGCAGAGTG +
Preference number: 4 (lower is better)
Translates to: SAEGPVSLWEFGQTRDAGNPRGG*MRRSRV
Trigger: CACTCTGCTTCGACGCATCCAGCCTCCCCTGGGGTT...TCCTGCATCCCTAGTTTGCCCGAACTCCCAAAGACTGACAGGCCCCTCGGCGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CCA 90 bp TACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCGGTGGGATGCTGGGGTaGGAGGTAGTAGGCGTCTCC +
Preference number: 4 (lower is better)
Translates to: YMGEADSTAVPIWTMGQGGGMLG*EVVGVS
Trigger: GGAGACGCCTACTACCTCCCACCCCAGCATCCCACC...GCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CCA 90 bp TACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGCTGCCGTTCACCTaGTCCAGGGCCTCTGACTGC +
Preference number: 4 (lower is better)
Translates to: YMGEADSTAVPIWTMGQGRLPFT*SRASDC
Trigger: GCAGTCAGAGGCCCTGGACCAGGTGAACGGCAGCCT...GCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CCA 90 bp GAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTGCAGTCTGCCCCTCGCTaGGGGCTACAAGGTGGTGAT +
Preference number: 4 (lower is better)
Translates to: EKQTPQQCPSGQWGRAGLQSAPR*GLQGGD
Trigger: ATCACCACCTTGTAGCCCCCAGCGAGGGGCAGACTG...CAGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CCA 90 bp CGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCACGGACCTTTTCACACTaGACCTTCTCTGAGGCTCCC +
Preference number: 4 (lower is better)
Translates to: RRHAFSWVGLVPWYMGEARTFSH*TFSEAP
Trigger: GGGAGCCTCAGAGAAGGTCCAGTGTGAAAAGGTCCG...TGCTTCTCCCATGTACCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422281.7
CDS-3UTR TCA 90 bp GGAGGTCATGGCGGACTGGCATACAAAAGGAACTCTGTCAGCTCAGCGCCGAGGCTGGCGTCCATTCCCTaGGAACGCACATGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: GGHGGLAYKRNSVSSAPRLASIP*ERTWSW
Trigger: CCAGCTCCATGTGCGTTCTCAGGGAATGGACGCCAG...CCTCGGCGCTGAGCTGACAGAGTTCCTTTTGTATGCCAGTCCGCCATGACCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR TCA 90 bp ACCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTCTCGCCTTCACCGCTaGCGTTCTCTGTGTTCACAG +
Preference number: 4 (lower is better)
Translates to: TFNFPLHPAAMPSVGWAWSRLHR*RSLCSQ
Trigger: CTGTGAACACAGAGAACGTCAGCGGTGAAGGCGAGA...CCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR TCA 90 bp GCTCCGCAGATGAGCCACGGCCCCGCTTCCACCTTCCGGAGGAGTGCTTTGCTTTACATCTTCTGCGATTaGATCGGTTCCAGCGACGCC +
Preference number: 4 (lower is better)
Translates to: APQMSHGPASTFRRSALLYIFCD*IGSSDA
Trigger: GGCGTCGCTGGAACCGATTCAATCGCAGAAGATGTA...AAGCAAAGCACTCCTCCGGAAGGTGGAAGCGGGGCCGTGGCTCATCTGCGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR TCA 90 bp ATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCAGACTCCACCAGCCAGTAAAACGTaGCAGACTTCACGGCGGCCC +
Preference number: 4 (lower is better)
Translates to: MPSVGWAWCPGTWEKQTPPASKT*QTSRRP
Trigger: GGGCCGCCGTGAAGTCTGTCACGTTTTACTGGCTGG...TGGAGTCTGCTTCTCCCATGTACCAGGGCACCAGGCCCACCCAACTGAAGGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR TCA 90 bp TCCCTTTCACGAAAAAGAACCACCGTGAGCAACGTCCGCGACAGGCAGCCCTGGCCAGCCAGTAAAACGTaGCAGACTTCACGGCGGCCC +
Preference number: 4 (lower is better)
Translates to: SLSRKRTTVSNVRDRQPWPASKT*QTSRRP
Trigger: GGGCCGCCGTGAAGTCTGTCACGTTTTACTGGCTGG...CCAGGGCTGCCTGTCGCGGACGTTGCTCACGGTGGTTCTTTTTCGTGAAAGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR TCA 90 bp CGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCATCCCCAGGGGAGACATaGTTTCCAGTTCCACCAAGA +
Preference number: 4 (lower is better)
Translates to: RRHAFSWVGLVPWYMGEASPGET*FPVPPR
Trigger: TCTTGGTGGAACTGGAAATCATGTCTCCCCTGGGGA...TGCTTCTCCCATGTACCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR TCA 90 bp GGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTGCAGACGATCATTCCTaGAGAGGATGGGCCCCCGTA +
Preference number: 4 (lower is better)
Translates to: GEADSTAVPIWTMGQGRSADDHS*RGWAPV
Trigger: TACGGGGGCCCATCCTCTTCAGGAATGATCGTCTGC...AGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR TCA 90 bp CGGTGCAGGGACGGCAGGCTGCCGTTCACCTGGTCCAGGGCCTCTGACTGCTCCTGCTTGTGGGAAGAATaGTGCCCATTTTCAGACACA +
Preference number: 4 (lower is better)
Translates to: RCRDGRLPFTWSRASDCSCLWEE*CPFSDT
Trigger: TGTGTCTGAAAATGGGCATCATTCTTCCCACAAGCA...GGAGCAGTCAGAGGCCCTGGACCAGGTGAACGGCAGCCTGCCGTCCCTGCACCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636448.1
CDS-3UTR TCA 90 bp ACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCACTGGTCCAGGGCCTCTaGCTGCTCCACTTGGATCAG +
Preference number: 4 (lower is better)
Translates to: TWEKQTPQQCPSGQWGRALVQGL*LLHLDQ
Trigger: CTGATCCAAGTGGAGCAGTCAGAGGCCCTGGACCAG...TGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR TCA 90 bp CCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCAGAGTTGGGCCCAGTGACTaGTATGCTAGACCGATGGCT +
Preference number: 4 (lower is better)
Translates to: PPCLQLGGPGALVHGRSRVGPSD*YARPMA
Trigger: AGCCATCGGTCTAGCATATCAGTCACTGGGCCCAAC...TCTGCTTCTCCCATGTACCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR TCA 90 bp CCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGTTGGGCCCAGTGACTaGTATGCTAGACCGATGGCT +
Preference number: 4 (lower is better)
Translates to: PLTFPCTPPPCLQLGGPGVGPSD*YARPMA
Trigger: AGCCATCGGTCTAGCATATCAGTCACTGGGCCCAAC...ACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR TCA 90 bp CCTCCTCACCCATCCTCTGTGAGAGGGCGGGGCCTGCTGTTTCCTGCAGCTGGGGAGCTGTTCATCTCCTaGGTCGGACCTTTTCACACT +
Preference number: 4 (lower is better)
Translates to: PPHPSSVRGRGLLFPAAGELFIS*VGPFHT
Trigger: AGTGTGAAAAGGTCCGACTCAGGAGATGAACAGCTC...CCCAGCTGCAGGAAACAGCAGGCCCCGCCCTCTCACAGAGGATGGGTGAGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000422281.7
CDS-3UTR TCA 90 bp AGCGCCGAGGGGCCTGTCAGTCTTTGGGAGTTCGGGCAAACTAGGGATGCAGGAGAAAAAGAACCACCGTaGGCAACGTCCGCGACAGGC +
Preference number: 4 (lower is better)
Translates to: SAEGPVSLWEFGQTRDAGEKEPP*ATSATG
Trigger: GCCTGTCGCGGACGTTGCTCACGGTGGTTCTTTTTC...TCCTGCATCCCTAGTTTGCCCGAACTCCCAAAGACTGACAGGCCCCTCGGCGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR TCA 90 bp GCTCCGCAGATGAGCCACGGCCCCGCTTCCACCTTCCGGAGGAGTGCTTTGCTTAGAACCCAGGTTCCCTaGCTCCCAGTGTCCTTGAAA +
Preference number: 4 (lower is better)
Translates to: APQMSHGPASTFRRSALLRTQVP*LPVSLK
Trigger: TTTCAAGGACACTGGGAGTCAGGGAACCTGGGTTCT...AAGCAAAGCACTCCTCCGGAAGGTGGAAGCGGGGCCGTGGCTCATCTGCGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000645528.2
CDS-3UTR GCA 90 bp GCGCCGAGGGGCCTGTCAGTCTTTGGGAGTTCGGGCAAACTAGGGATGCAGGACCAAAGCCTCCAGATTTaGCGCTTGAGTGGTTCCCGC +
Preference number: 4 (lower is better)
Translates to: APRGLSVFGSSGKLGMQDQSLQI*RLSGSR
Trigger: GCGGGAACCACTCAAGCGGCAAATCTGGAGGCTTTG...GTCCTGCATCCCTAGTTTGCCCGAACTCCCAAAGACTGACAGGCCCCTCGGCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR GCA 90 bp CCTTCCGGAGGAGTGCTTTGCTTGGAAGGGGTCTCCCTGGGGCCTTGGGTCTGCAGGATGCCACTAAGTTaGTCAGGGAAGTCCAGTGCC +
Preference number: 4 (lower is better)
Translates to: PSGGVLCLEGVSLGPWVCRMPLS*SGKSSA
Trigger: GGCACTGGACTTCCCTGAGCAACTTAGTGGCATCCT...GCAGACCCAAGGCCCCAGGGAGACCCCTTCCAAGCAAAGCACTCCTCCGGAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR GCA 90 bp AACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTTTGCCGCCAAACAGCTaGATCCCAAGCAAGGAAAAG +
Preference number: 4 (lower is better)
Translates to: NFPLHPAAMPSVGWAWCPLPPNS*IPSKEK
Trigger: CTTTTCCTTGCTTGGGATGCAGCTGTTTGGCGGCAA...AGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR GCA 90 bp TCCACCTTCCGGAGGAGTGCTTTGCTTGGAAGGGGTCTCCCTGGGGCCTTGGGTACTTTCAGTTGGGTCTaGTTCGCTGAGGGCCACGTC +
Preference number: 4 (lower is better)
Translates to: STFRRSALLGRGLPGALGTFSWV*FAEGHV
Trigger: GACGTGGCCCTCAGCGAAGCAGACCCAACTGAAAGT...ACCCAAGGCCCCAGGGAGACCCCTTCCAAGCAAAGCACTCCTCCGGAAGGTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636938.1
CDS-3UTR GCA 90 bp GGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTACTGAAATACTCCTaGTCCCCCAAGCAGTGGGGG +
Preference number: 4 (lower is better)
Translates to: GGPGALVHGRSRLHSSAHLLKYS*SPKQWG
Trigger: CCCCCACTGCTTGGGGGAGCAGGAGTATTTCAGTAG...ATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTACCAGGGCACCAGGCCCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR GCA 90 bp CGACACTCCAATCCTATAGATCACCACGTTGCTCCTCTGTCCCCAGCACCCCTTGGACCTCTTCCTGGCTaGTCTGCCGGCGCAGGCACT +
Preference number: 4 (lower is better)
Translates to: RHSNPIDHHVAPLSPAPLGPLPG*SAGAGT
Trigger: AGTGCCTGCGCCGGCAGAGCAGCCAGGAAGAGGTCC...AAGGGGTGCTGGGGACAGAGGAGCAACGTGGTGATCTATAGGATTGGAGTGTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR GCA 90 bp GGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCAGACTCCACAGCAGTGCCCATTGTTGCTGCATTAGATaGAGAGGCAGGGCCGTGCGA +
Preference number: 4 (lower is better)
Translates to: GGPGALVHGRSRLHSSAHCCCIR*RGRAVR
Trigger: TCGCACGGCCCTGCCTCTGCATCTAATGCAGCAACA...ATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTACCAGGGCACCAGGCCCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR GCA 90 bp ACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCATCCAGGGCCTCTGACTaGTCCACTTGGATCAGGGGG +
Preference number: 4 (lower is better)
Translates to: TWEKQTPQQCPSGQWGRASRASD*STWIRG
Trigger: CCCCCTGATCCAAGTGGAGCAGTCAGAGGCCCTGGA...TGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR GCA 90 bp CCTGGTACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCGAGCGCATGGTACTCTaGCAGGCTCAACCGCTTGGG +
Preference number: 4 (lower is better)
Translates to: PGTWEKQTPQQCPSGQWGERMVL*QAQPLG
Trigger: CCCAAGCGGTTGAGCCTGGCAGAGTACCATGCGCTC...GCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTACCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR GCA 90 bp GGAGGTCATGGCGGACTGGCATACAAAAGGAACTCTGTCAGCTCAGCGCCGAGGTCTCTGTGGGGCAGCTaGCCCCCTCCTTTGCTCTCT +
Preference number: 4 (lower is better)
Translates to: GGHGGLAYKRNSVSSAPRSLWGS*PPPLLS
Trigger: AGAGAGCAAAGGAGGGGGGCAGCTGCCCCACAGAGA...CCTCGGCGCTGAGCTGACAGAGTTCCTTTTGTATGCCAGTCCGCCATGACCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CCA 90 bp GGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCAGACTCCACAGCAGTGCCCATGAGAGATCCTACAGGTaGGGGTGCAGAGGTGCTCAT +
Preference number: 4 (lower is better)
Translates to: GGPGALVHGRSRLHSSAHERSYR*GCRGAH
Trigger: ATGAGCACCTCTGCACCCCCACCTGTAGGATCTCTC...ATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTACCAGGGCACCAGGCCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CCA 90 bp GCAGATGAGCCACGGCCCCGCTTCCACCTTCCGGAGGAGTGCTTTGCTTGGAAGGAGAGATCCTACAGGTaGGGGTGCAGAGGTGCTCAT +
Preference number: 4 (lower is better)
Translates to: ADEPRPRFHLPEECFAWKERSYR*GCRGAH
Trigger: ATGAGCACCTCTGCACCCCCACCTGTAGGATCTCTC...CTTCCAAGCAAAGCACTCCTCCGGAAGGTGGAAGCGGGGCCGTGGCTCATCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR CCA 90 bp GCTCCGCAGATGAGCCACGGCCCCGCTTCCACCTTCCGGAGGAGTGCTTTGCTTGGGCAGGTCGGCTGTTaGACGAGTTACCCTGTTTTT +
Preference number: 4 (lower is better)
Translates to: APQMSHGPASTFRRSALLGQVGC*TSYPVF
Trigger: AAAAACAGGGTAACTCGTCCAACAGCCGACCTGCCC...AAGCAAAGCACTCCTCCGGAAGGTGGAAGCGGGGCCGTGGCTCATCTGCGGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR CCA 90 bp CGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCAGAACGCACATGGAGCTaGGTCCTCTTCAGCTACGAT +
Preference number: 4 (lower is better)
Translates to: RRHAFSWVGLVPWYMGEAERTWS*VLFSYD
Trigger: ATCGTAGCTGAAGAGGACCCAGCTCCATGTGCGTTC...TGCTTCTCCCATGTACCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CCA 90 bp CCTTCCGGAGGAGTGCTTTGCTTGGAAGGGGTCTCCCTGGGGCCTTGGGTCTGCGAACGCACATGGAGCTaGGTCCTCTTCAGCTACGAT +
Preference number: 4 (lower is better)
Translates to: PSGGVLCLEGVSLGPWVCERTWS*VLFSYD
Trigger: ATCGTAGCTGAAGAGGACCCAGCTCCATGTGCGTTC...GCAGACCCAAGGCCCCAGGGAGACCCCTTCCAAGCAAAGCACTCCTCCGGAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR CCA 90 bp CCTTCCGGAGGAGTGCTTTGCTTGGAAGGGGTCTCCCTGGGGCCTTGGGTCTGCTTCCTCTTCCCCTACTaGCACATCGCAAGGCGGATA +
Preference number: 4 (lower is better)
Translates to: PSGGVLCLEGVSLGPWVCFLFPY*HIARRI
Trigger: TATCCGCCTTGCGATGTGCCAGTAGGGGAAGAGGAA...GCAGACCCAAGGCCCCAGGGAGACCCCTTCCAAGCAAAGCACTCCTCCGGAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR CCA 90 bp GGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTTGGTTGATGAGCTTGTaGCAGCCTACGCGGATCGGG +
Preference number: 4 (lower is better)
Translates to: GEADSTAVPIWTMGQGRSWLMSL*QPTRIG
Trigger: CCCGATCCGCGTAGGCTGCCACAAGCTCATCAACCA...AGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CCA 90 bp AGCGCCGAGGGGCCTGTCAGTCTTTGGGAGTTCGGGCAAACTAGGGATGCAGGATGGTTGATGAGCTTGTaGCAGCCTACGCGGATCGGG +
Preference number: 4 (lower is better)
Translates to: SAEGPVSLWEFGQTRDAGWLMSL*QPTRIG
Trigger: CCCGATCCGCGTAGGCTGCCACAAGCTCATCAACCA...TCCTGCATCCCTAGTTTGCCCGAACTCCCAAAGACTGACAGGCCCCTCGGCGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR CCA 90 bp CTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGCTTCAGGGTTACTTTTaGCTTCATCCGTACAGCGAT +
Preference number: 4 (lower is better)
Translates to: LSPAPRRHAFSWVGLVPWLQGYF*LHPYSD
Trigger: ATCGCTGTACGGATGAAGCCAAAAGTAACCCTGAAG...CCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CCA 90 bp ATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTGCGATGGGGGAAGATaGGAGACGACGGGACCTCTT +
Preference number: 4 (lower is better)
Translates to: MGEADSTAVPIWTMGQGRCDGGR*ETTGPL
Trigger: AAGAGGTCCCGTCGTCTCCCATCTTCCCCCATCGCA...CCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CCA 90 bp CCTGGTACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCCAGTCTGCCCCTCGCTaGGGGCTACAAGGTGGTGAT +
Preference number: 4 (lower is better)
Translates to: PGTWEKQTPQQCPSGQWGQSAPR*GLQGGD
Trigger: ATCACCACCTTGTAGCCCCCAGCGAGGGGCAGACTG...GCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTACCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CCA 90 bp ACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCACAGTCTGCCCCTCGCTaGGGGCTACAAGGTGGTGAT +
Preference number: 4 (lower is better)
Translates to: TWEKQTPQQCPSGQWGRAQSAPR*GLQGGD
Trigger: ATCACCACCTTGTAGCCCCCAGCGAGGGGCAGACTG...TGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CCA 90 bp TACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCGCTGTTTCCTGCAGCTaGGGCCGAGCGCATGGTACT +
Preference number: 4 (lower is better)
Translates to: YMGEADSTAVPIWTMGQGAVSCS*GRAHGT
Trigger: AGTACCATGCGCTCGGCCCCAGCTGCAGGAAACAGC...GCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CCA 90 bp CTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGAGTTGCAACCCATGGTaGATCCAAAGGTACAGTATC +
Preference number: 4 (lower is better)
Translates to: LSPAPRRHAFSWVGLVPWSCNPW*IQRYSI
Trigger: GATACTGTACCTTTGGATCCACCATGGGTTGCAACT...CCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR CCA 90 bp CCTTCCGGAGGAGTGCTTTGCTTGGAAGGGGTCTCCCTGGGGCCTTGGGTCTGCGAGGTTTGGGTGTGGTaGTGTTTCCTGTGGACACGT +
Preference number: 4 (lower is better)
Translates to: PSGGVLCLEGVSLGPWVCEVWVW*CFLWTR
Trigger: ACGTGTCCACAGGAAACACCACCACACCCAAACCTC...GCAGACCCAAGGCCCCAGGGAGACCCCTTCCAAGCAAAGCACTCCTCCGGAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000645528.2
CDS-3UTR TCA 90 bp CCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTTGTCCTCAGCTTGGGTaGTCCAATCCAAGTAGCCCT +
Preference number: 4 (lower is better)
Translates to: PLTFPCTPPPCLQLGGPGCPQLG*SNPSSP
Trigger: AGGGCTACTTGGATTGGATCACCCAAGCTGAGGACA...ACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR TCA 90 bp AGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTGGTCTCGCCTTCACCGCTaGCGTTCTCTGTGTTCACAG +
Preference number: 4 (lower is better)
Translates to: RSRLHSSAHLDNGAGQVWSRLHR*RSLCSQ
Trigger: CTGTGAACACAGAGAACGTCAGCGGTGAAGGCGAGA...CCAGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR TCA 90 bp GCAGATGAGCCACGGCCCCGCTTCCACCTTCCGGAGGAGTGCTTTGCTTGGAAGGCTGAGTTTGGATTTTaGGATGGCTTGACCCCACCG +
Preference number: 4 (lower is better)
Translates to: ADEPRPRFHLPEECFAWKAEFGF*DGLTPP
Trigger: CGGTGGGGTCAAGCCATCTCAAAATCCAAACTCAGC...CTTCCAAGCAAAGCACTCCTCCGGAAGGTGGAAGCGGGGCCGTGGCTCATCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000640483.1
CDS-3UTR TCA 90 bp ATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCAGACTCCAGGCCCCCGTAAGCCATaGTGCCATCGTACATCACAG +
Preference number: 4 (lower is better)
Translates to: MPSVGWAWCPGTWEKQTPGPRKP*CHRTSQ
Trigger: CTGTGATGTACGATGGCATCATGGCTTACGGGGGCC...TGGAGTCTGCTTCTCCCATGTACCAGGGCACCAGGCCCACCCAACTGAAGGCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR TCA 90 bp ACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGCAGACGATCATTCCTaGAGAGGATGGGCCCCCGTA +
Preference number: 4 (lower is better)
Translates to: TWEKQTPQQCPSGQWGRAADDHS*RGWAPV
Trigger: TACGGGGGCCCATCCTCTTCAGGAATGATCGTCTGC...TGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR TCA 90 bp ACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAACACTGGACCTTCTCTaGGGCTCCCGGTCATGCTTG +
Preference number: 4 (lower is better)
Translates to: TWEKQTPQQCPSGQWGRATLDLL*GSRSCL
Trigger: CAAGCATGACCGGGAGCCTCAGAGAAGGTCCAGTGT...TGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR TCA 90 bp ACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGCAGGCACTCAAAGTTaGAGGAGGATCTCCGGTGGG +
Preference number: 4 (lower is better)
Translates to: TWEKQTPQQCPSGQWGRAAGTQS*RRISGG
Trigger: CCCACCGGAGATCCTCCTTCAACTTTGAGTGCCTGC...TGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR TCA 90 bp CTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGTTCGTGTTTTGTTGCTaGCACAAATTTTGGGTCCCT +
Preference number: 4 (lower is better)
Translates to: LSPAPRRHAFSWVGLVPWFVFCC*HKFWVP
Trigger: AGGGACCCAAAATTTGTGTCAGCAACAAAACACGAA...CCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR TCA 90 bp GAGCTGCGGTGCAGGGACGGCAGGCTGCCGTTCACCTGGTCCAGGGCCTCTGACTTCGTGTTTTGTTGCTaGCACAAATTTTGGGTCCCT +
Preference number: 4 (lower is better)
Translates to: ELRCRDGRLPFTWSRASDFVFCC*HKFWVP
Trigger: AGGGACCCAAAATTTGTGTCAGCAACAAAACACGAA...GTCAGAGGCCCTGGACCAGGTGAACGGCAGCCTGCCGTCCCTGCACCGCAGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636448.1
CDS-3UTR TCA 90 bp GGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCAGTTGCCCTTAGCGTaGCAGTCAGAAACCGACCAT +
Preference number: 4 (lower is better)
Translates to: GGPGALVHGRSRLHSSAHQLPLA*QSETDH
Trigger: ATGGTCGGTTTCTGACTGTCACGCTAAGGGCAACTG...ATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTACCAGGGCACCAGGCCCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR GCA 90 bp GAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTGCAAAGCCTCCAGATTTaGCGCTTGAGTGGTTCCCGC +
Preference number: 4 (lower is better)
Translates to: EKQTPQQCPSGQWGRAGLQSLQI*RLSGSR
Trigger: GCGGGAACCACTCAAGCGGCAAATCTGGAGGCTTTG...CAGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR GCA 90 bp GGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCACTCCTACATTCCGTaGCATTGGCAGTACACTGGC +
Preference number: 4 (lower is better)
Translates to: GGPGALVHGRSRLHSSAHHSYIP*HWQYTG
Trigger: GCCAGTGTACTGCCAATGGCACGGAATGTAGGAGTG...ATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTACCAGGGCACCAGGCCCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR GCA 90 bp AACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTCTCAGGGAAGTCCAGTaGCTGGTCACTTTGAAGATT +
Preference number: 4 (lower is better)
Translates to: NFPLHPAAMPSVGWAWCPLREVQ*LVTLKI
Trigger: AATCTTCAAAGTGACCAGGCACTGGACTTCCCTGAG...AGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR GCA 90 bp CCTGGTACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCCCAGGCCTCACCTGTTaGACACCTGAAGAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: PGTWEKQTPQQCPSGQWGPGLTC*TPEEQQ
Trigger: CTGCTGCTCTTCAGGTGTGCAACAGGTGAGGCCTGG...GCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTACCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR GCA 90 bp GGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCAGACTCCACAGCAGTGCCCATTCTGGCCCAATGTCATaGAGTGTCCTTAATCCCGCC +
Preference number: 4 (lower is better)
Translates to: GGPGALVHGRSRLHSSAHSGPMS*SVLNPA
Trigger: GGCGGGATTAAGGACACTGCATGACATTGGGCCAGA...ATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTACCAGGGCACCAGGCCCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR GCA 90 bp TACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCGAAGGCCTTTGGACATaGAGGGGACGGTGGGTGGTA +
Preference number: 4 (lower is better)
Translates to: YMGEADSTAVPIWTMGQGEGLWT*RGRWVV
Trigger: TACCACCCACCGTCCCCTGCATGTCCAAAGGCCTTC...GCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR GCA 90 bp TCATCACCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGGAAGGCCTTTGGACATaGAGGGGACGGTGGGTGGTA +
Preference number: 4 (lower is better)
Translates to: SSPLTFPCTPPPCLQLGGEGLWT*RGRWVV
Trigger: TACCACCCACCGTCCCCTGCATGTCCAAAGGCCTTC...CCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGGTGATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR GCA 90 bp AACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTACACACCGAATTTCCTaGTGGAGGAAACAGCGGTTT +
Preference number: 4 (lower is better)
Translates to: NFPLHPAAMPSVGWAWCPTHRIS*WRKQRF
Trigger: AAACCGCTGTTTCCTCCAGCAGGAAATTCGGTGTGT...AGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR GCA 90 bp GAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTGCTACTGAAATACTCCTaGTCCCCCAAGCAGTGGGGG +
Preference number: 4 (lower is better)
Translates to: EKQTPQQCPSGQWGRAGLLLKYS*SPKQWG
Trigger: CCCCCACTGCTTGGGGGAGCAGGAGTATTTCAGTAG...CAGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR GCA 90 bp CTCGTCTGTGTACCAGGAGCTGCGGTGCAGGGACGGCAGGCTGCCGTTCACCTGACTGCCATGATCTGTTaGTGCATTAGATGCAGAGGC +
Preference number: 4 (lower is better)
Translates to: LVCVPGAAVQGRQAAVHLTAMIC*CIRCRG
Trigger: GCCTCTGCATCTAATGCAGCAACAGATCATGGCAGT...CAGGTGAACGGCAGCCTGCCGTCCCTGCACCGCAGCTCCTGGTACACAGACGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636448.1
CDS-3UTR GCA 90 bp CAGACACTTAGGGTCCTGGTCTGGCAATTTTGGCCTGATGTGATGCCACAAGACCCGGTAGGGAGGGGTTaGTGGAGGGGTGGCCCACGA +
Preference number: 4 (lower is better)
Translates to: QTLRVLVWQFWPDVMPQDPVGRG*WRGGPR
Trigger: TCGTGGGCCACCCCTCCAGCAACCCCTCCCTACCGG...GTCTTGTGGCATCACATCAGGCCAAAATTGCCAGACCAGGACCCTAAGTGTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR GCA 90 bp CCTCCTCACCCATCCTCTGTGAGAGGGCGGGGCCTGCTGTTTCCTGCAGCTGGGAAATTTTGGGTCCCTTaGATAGCGTCCCAAGCCTTC +
Preference number: 4 (lower is better)
Translates to: PPHPSSVRGRGLLFPAAGKFWVP*IASQAF
Trigger: GAAGGCTTGGGACGCTATGCAAGGGACCCAAAATTT...CCCAGCTGCAGGAAACAGCAGGCCCCGCCCTCTCACAGAGGATGGGTGAGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR GCA 90 bp ACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCACCTTTAACTTTCCCCTaGACCCCGCCGCCATGCCTT +
Preference number: 4 (lower is better)
Translates to: TWEKQTPQQCPSGQWGRAPLTFP*TPPPCL
Trigger: AAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGG...TGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR GCA 90 bp GAGCTTCCTGGCCTGTCCACTTCTCACTGTATTCTGGACTGGGTCTCTGCAGAGTCTGGACTGGGTCTCTaGAGAGAGCAGGGCCGGACG +
Preference number: 4 (lower is better)
Translates to: ELPGLSTSHCILDWVSAESGLGL*REQGRT
Trigger: CGTCCGGCCCTGCTCTCTGCAGAGACCCAGTCCAGA...CTCTGCAGAGACCCAGTCCAGAATACAGTGAGAAGTGGACAGGCCAGGAAGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CCA 90 bp GCAGATGAGCCACGGCCCCGCTTCCACCTTCCGGAGGAGTGCTTTGCTTGGAAGGAGGTGCTCATAGTTTaGGCAGCCTTGGCCTGTCTA +
Preference number: 4 (lower is better)
Translates to: ADEPRPRFHLPEECFAWKEVLIV*AALACL
Trigger: TAGACAGGCCAAGGCTGCCCAAACTATGAGCACCTC...CTTCCAAGCAAAGCACTCCTCCGGAAGGTGGAAGCGGGGCCGTGGCTCATCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR CCA 90 bp GCAGATGAGCCACGGCCCCGCTTCCACCTTCCGGAGGAGTGCTTTGCTTGGAAGCCATTGGCAGTACACTaGCGTCCATTCCCTGAGAAC +
Preference number: 4 (lower is better)
Translates to: ADEPRPRFHLPEECFAWKPLAVH*RPFPEN
Trigger: GTTCTCAGGGAATGGACGCCAGTGTACTGCCAATGG...CTTCCAAGCAAAGCACTCCTCCGGAAGGTGGAAGCGGGGCCGTGGCTCATCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR CCA 90 bp CCTTCCGGAGGAGTGCTTTGCTTGGAAGGGGTCTCCCTGGGGCCTTGGGTCTGCTCGCCTGTCAGGATCTaGAACACTGTGAGAAGTGCT +
Preference number: 4 (lower is better)
Translates to: PSGGVLCLEGVSLGPWVCSPVRI*NTVRSA
Trigger: AGCACTTCTCACAGTGTTCCAGATCCTGACAGGCGA...GCAGACCCAAGGCCCCAGGGAGACCCCTTCCAAGCAAAGCACTCCTCCGGAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR CCA 90 bp TACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCTGGTTGATGAGCTTGTaGCAGCCTACGCGGATCGGG +
Preference number: 4 (lower is better)
Translates to: YMGEADSTAVPIWTMGQGWLMSL*QPTRIG
Trigger: CCCGATCCGCGTAGGCTGCCACAAGCTCATCAACCA...GCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CCA 90 bp GGCCTTAGCCACAAACGCCTTCCGACTAACCAGCTTGGTGCCGTAGCTCAGGCATGGTTGATGAGCTTGTaGCAGCCTACGCGGATCGGG +
Preference number: 4 (lower is better)
Translates to: GLSHKRLPTNQLGAVAQAWLMSL*QPTRIG
Trigger: CCCGATCCGCGTAGGCTGCCACAAGCTCATCAACCA...TGCCTGAGCTACGGCACCAAGCTGGTTAGTCGGAAGGCGTTTGTGGCTAAGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR CCA 90 bp AACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTTTGGTGAAGATGTGGTaGTTGATGAGCTTGTGGCAG +
Preference number: 4 (lower is better)
Translates to: NFPLHPAAMPSVGWAWCPLVKMW*LMSLWQ
Trigger: CTGCCACAAGCTCATCAACCACCACATCTTCACCAA...AGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CCA 90 bp ATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGGCCACGAAGACGCACTaGACCACGTGCTTAAGTCCT +
Preference number: 4 (lower is better)
Translates to: MGEADSTAVPIWTMGQGRATKTH*TTCLSP
Trigger: AGGACTTAAGCACGTGGTCCAGTGCGTCTTCGTGGC...CCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CCA 90 bp GAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTGGCCACGAAGACGCACTaGACCACGTGCTTAAGTCCT +
Preference number: 4 (lower is better)
Translates to: EKQTPQQCPSGQWGRAGLATKTH*TTCLSP
Trigger: AGGACTTAAGCACGTGGTCCAGTGCGTCTTCGTGGC...CAGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CCA 90 bp CCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGACGGTGGGTGGTATTaGTCTGCTGAAGGGAATCTC +
Preference number: 4 (lower is better)
Translates to: PLTFPCTPPPCLQLGGPGDGGWY*SAEGNL
Trigger: GAGATTCCCTTCAGCAGACCAATACCACCCACCGTC...ACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CCA 90 bp ACCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGCTGGGCCGCTTTCCATaGGCAGCTTTGGACATATTG +
Preference number: 4 (lower is better)
Translates to: TFNFPLHPAAMPSVGWAWLGRFP*AALDIL
Trigger: CAATATGTCCAAAGCTGCCCATGGAAAGCGGCCCAG...CCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CCA 90 bp CCTGGTACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCCAAGGTTCCCAATGCTaGGCCGCTTTCCATGGGCAG +
Preference number: 4 (lower is better)
Translates to: PGTWEKQTPQQCPSGQWGQGSQC*AAFHGQ
Trigger: CTGCCCATGGAAAGCGGCCCAGCATTGGGAACCTTG...GCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTACCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CCA 90 bp CAGACACTTAGGGTCCTGGTCTGGCAATTTTGGCCTGATGTGATGCCACAAGACGGGTTGCTGGAGGGGTaGCCCACGACCGGGTCGAGT +
Preference number: 4 (lower is better)
Translates to: QTLRVLVWQFWPDVMPQDGLLEG*PTTGSS
Trigger: ACTCGACCCGGTCGTGGGCCACCCCTCCAGCAACCC...GTCTTGTGGCATCACATCAGGCCAAAATTGCCAGACCAGGACCCTAAGTGTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR CCA 90 bp GGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTGACAGTCAGGCTGGCTaGTGTGAAAGTCCGGTAGGA +
Preference number: 4 (lower is better)
Translates to: GEADSTAVPIWTMGQGRSDSQAG*CESPVG
Trigger: TCCTACCGGACTTTCACACCAGCCAGCCTGACTGTC...AGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CCA 90 bp CCAAGGGGCAGAGCAGCCAGCTGGACCTGCTCTGTAATTCACTTACTTACTTACGGCCCACATCCCCGTTaGCTCGGGGACGCACGTTCC +
Preference number: 4 (lower is better)
Translates to: PRGRAASWTCSVIHLLTYGPHPR*LGDARS
Trigger: GGAACGTGCGTCCCCGAGCCAACGGGGATGTGGGCC...GTAAGTAAGTAAGTGAATTACAGAGCAGGTCCAGCTGGCTGCTCTGCCCCTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR CCA 90 bp GGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTTGGTGCCCTGGTACATaGGAGAAGCAGACTCCACAG +
Preference number: 4 (lower is better)
Translates to: GEADSTAVPIWTMGQGRSWCPGT*EKQTPQ
Trigger: CTGTGGAGTCTGCTTCTCCCATGTACCAGGGCACCA...AGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CCA 90 bp AGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTGGTGGTGCCCTGGTACATaGGAGAAGCAGACTCCACAG +
Preference number: 4 (lower is better)
Translates to: RSRLHSSAHLDNGAGQVWWCPGT*EKQTPQ
Trigger: CTGTGGAGTCTGCTTCTCCCATGTACCAGGGCACCA...CCAGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CCA 90 bp CTCGTCTGTGTACCAGGAGCTGCGGTGCAGGGACGGCAGGCTGCCGTTCACCTGGACAGTTGCAACCCATaGTGGATCCAAAGGTACAGT +
Preference number: 4 (lower is better)
Translates to: LVCVPGAAVQGRQAAVHLDSCNP*WIQRYS
Trigger: ACTGTACCTTTGGATCCACCATGGGTTGCAACTGTC...CAGGTGAACGGCAGCCTGCCGTCCCTGCACCGCAGCTCCTGGTACACAGACGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636448.1
CDS-3UTR CCA 90 bp AACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTCTGGTCTGGCAATTTTaGCCTGATGTGATGCCACAA +
Preference number: 4 (lower is better)
Translates to: NFPLHPAAMPSVGWAWCPLVWQF*PDVMPQ
Trigger: TTGTGGCATCACATCAGGCCAAAATTGCCAGACCAG...AGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR CCA 90 bp CGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCACTTAGGGTCCTGGTCTaGCAATTTTGGCCTGATGTG +
Preference number: 4 (lower is better)
Translates to: RRHAFSWVGLVPWYMGEALRVLV*QFWPDV
Trigger: CACATCAGGCCAAAATTGCCAGACCAGGACCCTAAG...TGCTTCTCCCATGTACCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR CCA 90 bp AGCGCCGAGGGGCCTGTCAGTCTTTGGGAGTTCGGGCAAACTAGGGATGCAGGAGGGCCTGTCAGTCTTTaGGAGTTCGGGCAAACTAGG +
Preference number: 4 (lower is better)
Translates to: SAEGPVSLWEFGQTRDAGGPVSL*EFGQTR
Trigger: CCTAGTTTGCCCGAACTCCCAAAGACTGACAGGCCC...TCCTGCATCCCTAGTTTGCCCGAACTCCCAAAGACTGACAGGCCCCTCGGCGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CCA 90 bp CCTTCCGGAGGAGTGCTTTGCTTGGAAGGGGTCTCCCTGGGGCCTTGGGTCTGCGTGGACACGTTAAGATaGAACCTGAGGTGTTGCCTG +
Preference number: 4 (lower is better)
Translates to: PSGGVLCLEGVSLGPWVCVDTLR*NLRCCL
Trigger: CAGGCAACACCTCAGGTTCCATCTTAACGTGTCCAC...GCAGACCCAAGGCCCCAGGGAGACCCCTTCCAAGCAAAGCACTCCTCCGGAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CCA 90 bp CCTTCCGGAGGAGTGCTTTGCTTGGAAGGGGTCTCCCTGGGGCCTTGGGTCTGCCCACTTTGGGTGTCTTaGGCTCAGCATCAGATGTAC +
Preference number: 4 (lower is better)
Translates to: PSGGVLCLEGVSLGPWVCPLWVS*AQHQMY
Trigger: GTACATCTGATGCTGAGCCCAAGACACCCAAAGTGG...GCAGACCCAAGGCCCCAGGGAGACCCCTTCCAAGCAAAGCACTCCTCCGGAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636938.1
CDS-3UTR TCA 90 bp ACTGACTTTGGAAAAGATCATCGCCTCTATCAGACACTTAGGGTCCTGGTCTGGCACTGTGCTGGGCGTTaGGGCGGGGGCGGAATGGGG +
Preference number: 4 (lower is better)
Translates to: TDFGKDHRLYQTLRVLVWHCAGR*GGGGMG
Trigger: CCCCATTCCGCCCCCGCCTCAACGCCCAGCACAGTG...CCAGACCAGGACCCTAAGTGTCTGATAGAGGCGATGATCTTTTCCAAAGTCAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR TCA 90 bp TCATCACCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGTCCAGATTTGCCGCTTaGGTGGTTCCCGCCTTCTGT +
Preference number: 4 (lower is better)
Translates to: SSPLTFPCTPPPCLQLGGSRFAA*VVPAFC
Trigger: ACAGAAGGCGGGAACCACTCAAGCGGCAAATCTGGA...CCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGGTGATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR TCA 90 bp GGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTTGTCCTCAGCTTGGGTaGTCCAATCCAAGTAGCCCT +
Preference number: 4 (lower is better)
Translates to: GEADSTAVPIWTMGQGRSCPQLG*SNPSSP
Trigger: AGGGCTACTTGGATTGGATCACCCAAGCTGAGGACA...AGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR TCA 90 bp TCCCTTTCACGAAAAAGAACCACCGTGAGCAACGTCCGCGACAGGCAGCCCTGGCCAGCATCTCGCAGGTaGACAGAGCCAAGAGGACTT +
Preference number: 4 (lower is better)
Translates to: SLSRKRTTVSNVRDRQPWPASRR*TEPRGL
Trigger: AAGTCCTCTTGGCTCTGTTCACCTGCGAGATGCTGG...CCAGGGCTGCCTGTCGCGGACGTTGCTCACGGTGGTTCTTTTTCGTGAAAGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR TCA 90 bp TCCACCTTCCGGAGGAGTGCTTTGCTTGGAAGGGGTCTCCCTGGGGCCTTGGGTGGATTGAATCCCAAATaGCACCAGAGACACCCCAAC +
Preference number: 4 (lower is better)
Translates to: STFRRSALLGRGLPGALGGLNPK*HQRHPN
Trigger: GTTGGGGTGTCTCTGGTGTCATTTGGGATTCAATCC...ACCCAAGGCCCCAGGGAGACCCCTTCCAAGCAAAGCACTCCTCCGGAAGGTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR TCA 90 bp CCTCCTCACCCATCCTCTGTGAGAGGGCGGGGCCTGCTGTTTCCTGCAGCTGGGCATCCTTGTAGAGGATaGAAAGTCCCCTGCATTCTT +
Preference number: 4 (lower is better)
Translates to: PPHPSSVRGRGLLFPAAGHPCRG*KVPCIL
Trigger: AAGAATGCAGGGGACTTTTCATCCTCTACAAGGATG...CCCAGCTGCAGGAAACAGCAGGCCCCGCCCTCTCACAGAGGATGGGTGAGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR TCA 90 bp CCTTCCGGAGGAGTGCTTTGCTTGGAAGGGGTCTCCCTGGGGCCTTGGGTCTGCTGTCCATGGCATCATTaGACATCTTGGACTGCTCGT +
Preference number: 4 (lower is better)
Translates to: PSGGVLCLEGVSLGPWVCCPWHH*TSWTAR
Trigger: ACGAGCAGTCCAAGATGTTCAATGATGCCATGGACA...GCAGACCCAAGGCCCCAGGGAGACCCCTTCCAAGCAAAGCACTCCTCCGGAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR TCA 90 bp TCATCACCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCCGGGGTTGTAATCTaGCTCAGGGTCACAGAGCTT +
Preference number: 4 (lower is better)
Translates to: SSPLTFPCTPPPCLQLGGPGVVI*LRVTEL
Trigger: AAGCTCTGTGACCCTGAGTCAGATTACAACCCCGGG...CCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGGTGATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR TCA 90 bp GGCCTTAGCCACAAACGCCTTCCGACTAACCAGCTTGGTGCCGTAGCTCAGGCACCCGGGGTTGTAATCTaGCTCAGGGTCACAGAGCTT +
Preference number: 4 (lower is better)
Translates to: GLSHKRLPTNQLGAVAQAPGVVI*LRVTEL
Trigger: AAGCTCTGTGACCCTGAGTCAGATTACAACCCCGGG...TGCCTGAGCTACGGCACCAAGCTGGTTAGTCGGAAGGCGTTTGTGGCTAAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000636938.1
ENST00000638120.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR TCA 90 bp CCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCAGAAGCATTCCTCACTACTaGAATACTCCTGCTCCCCCA +
Preference number: 4 (lower is better)
Translates to: PPCLQLGGPGALVHGRSRSIPHY*NTPAPP
Trigger: TGGGGGAGCAGGAGTATTTCAGTAGTGAGGAATGCT...TCTGCTTCTCCCATGTACCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR TCA 90 bp CCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTAGCATTCCTCACTACTaGAATACTCCTGCTCCCCCA +
Preference number: 4 (lower is better)
Translates to: PLTFPCTPPPCLQLGGPGSIPHY*NTPAPP
Trigger: TGGGGGAGCAGGAGTATTTCAGTAGTGAGGAATGCT...ACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR TCA 90 bp ATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGCCTTGGAGATCTCCGTaGATCATAGCAAACGGGCGA +
Preference number: 4 (lower is better)
Translates to: MGEADSTAVPIWTMGQGRPWRSP*IIANGR
Trigger: TCGCCCGTTTGCTATGATTCACGGAGATCTCCAAGG...CCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR TCA 90 bp CCTGGTACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCTCAGGCTGGCTGGTGTaGAAGTCCGGTAGGAGATGT +
Preference number: 4 (lower is better)
Translates to: PGTWEKQTPQQCPSGQWGSGWLV*KSGRRC
Trigger: ACATCTCCTACCGGACTTTCACACCAGCCAGCCTGA...GCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTACCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR TCA 90 bp CGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCACTGGTAGCTGGGTTCTaGCTTACTTACACACCGTAT +
Preference number: 4 (lower is better)
Translates to: RRHAFSWVGLVPWYMGEALVAGF*LTYTPY
Trigger: ATACGGTGTGTAAGTAAGTCAGAACCCAGCTACCAG...TGCTTCTCCCATGTACCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR TCA 90 bp CCTCCTCACCCATCCTCTGTGAGAGGGCGGGGCCTGCTGTTTCCTGCAGCTGGGAGAAAACCTTATTTATaGGGTCCCATTGCCCTCGCA +
Preference number: 4 (lower is better)
Translates to: PPHPSSVRGRGLLFPAAGRKPYL*GPIALA
Trigger: TGCGAGGGCAATGGGACCTCATAAATAAGGTTTTCT...CCCAGCTGCAGGAAACAGCAGGCCCCGCCCTCTCACAGAGGATGGGTGAGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR TCA 90 bp AGCGCCGAGGGGCCTGTCAGTCTTTGGGAGTTCGGGCAAACTAGGGATGCAGGAAGAACCCAGGTTCCCTaGCTCCCAGTGTCCTTGAAA +
Preference number: 4 (lower is better)
Translates to: SAEGPVSLWEFGQTRDAGRTQVP*LPVSLK
Trigger: TTTCAAGGACACTGGGAGTCAGGGAACCTGGGTTCT...TCCTGCATCCCTAGTTTGCCCGAACTCCCAAAGACTGACAGGCCCCTCGGCGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000645528.2
CDS-3UTR GCA 90 bp CCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCAGAGCATCGATTGCAGCTTaGCAAGACAGGACAGTTTGC +
Preference number: 4 (lower is better)
Translates to: PPCLQLGGPGALVHGRSRASIAA*QDRTVC
Trigger: GCAAACTGTCCTGTCTTGGCAAGCTGCAATCGATGC...TCTGCTTCTCCCATGTACCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR GCA 90 bp GCAGATGAGCCACGGCCCCGCTTCCACCTTCCGGAGGAGTGCTTTGCTTGGAAGTCTAGCAGCATCGATTaGAGCTTGCCAAGACAGGAC +
Preference number: 4 (lower is better)
Translates to: ADEPRPRFHLPEECFAWKSSSID*SLPRQD
Trigger: GTCCTGTCTTGGCAAGCTGCAATCGATGCTGCTAGA...CTTCCAAGCAAAGCACTCCTCCGGAAGGTGGAAGCGGGGCCGTGGCTCATCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR GCA 90 bp GGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTCACTCCTACATTCCGTaGCATTGGCAGTACACTGGC +
Preference number: 4 (lower is better)
Translates to: GEADSTAVPIWTMGQGRSHSYIP*HWQYTG
Trigger: GCCAGTGTACTGCCAATGGCACGGAATGTAGGAGTG...AGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR GCA 90 bp GCTCCGCAGATGAGCCACGGCCCCGCTTCCACCTTCCGGAGGAGTGCTTTGCTTCTCAGGGAAGTCCAGTaGCTGGTCACTTTGAAGATT +
Preference number: 4 (lower is better)
Translates to: APQMSHGPASTFRRSALLLREVQ*LVTLKI
Trigger: AATCTTCAAAGTGACCAGGCACTGGACTTCCCTGAG...AAGCAAAGCACTCCTCCGGAAGGTGGAAGCGGGGCCGTGGCTCATCTGCGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR GCA 90 bp TCATCACCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGACTTTCAGTTGGGTCTaGTTCGCTGAGGGCCACGTC +
Preference number: 4 (lower is better)
Translates to: SSPLTFPCTPPPCLQLGGTFSWV*FAEGHV
Trigger: GACGTGGCCCTCAGCGAAGCAGACCCAACTGAAAGT...CCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGGTGATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR GCA 90 bp GCTCCGCAGATGAGCCACGGCCCCGCTTCCACCTTCCGGAGGAGTGCTTTGCTTAGTTCTTCATTAGCTTaGTCCAGGTTCCCTTCGGTC +
Preference number: 4 (lower is better)
Translates to: APQMSHGPASTFRRSALLSSSLA*SRFPSV
Trigger: GACCGAAGGGAACCTGGAGCAAGCTAATGAAGAACT...AAGCAAAGCACTCCTCCGGAAGGTGGAAGCGGGGCCGTGGCTCATCTGCGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR GCA 90 bp TGCAGAGGCAGGGCCGTGCGATGGGGGAAGATGGGAGACGACGGGACCTCTTCCCCATTTTCAGACACATaGTCAAGGTTCCCAATGCTG +
Preference number: 4 (lower is better)
Translates to: CRGRAVRWGKMGDDGTSSPFSDT*SRFPML
Trigger: CAGCATTGGGAACCTTGAGCATGTGTCTGAAAATGG...GGAAGAGGTCCCGTCGTCTCCCATCTTCCCCCATCGCACGGCCCTGCCTCTGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000636448.1
CDS-3UTR GCA 90 bp ACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCATGTTGCTGCATTAGATaGAGAGGCAGGGCCGTGCGA +
Preference number: 4 (lower is better)
Translates to: TWEKQTPQQCPSGQWGRACCCIR*RGRAVR
Trigger: TCGCACGGCCCTGCCTCTGCATCTAATGCAGCAACA...TGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR GCA 90 bp TACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCTGTTGCTGCATTAGATaGAGAGGCAGGGCCGTGCGA +
Preference number: 4 (lower is better)
Translates to: YMGEADSTAVPIWTMGQGCCCIR*RGRAVR
Trigger: TCGCACGGCCCTGCCTCTGCATCTAATGCAGCAACA...GCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR GCA 90 bp GGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCAGACTCCACAGCAGTGCCCATGCCATGATCTGTTGCTaGATTAGATGCAGAGGCAGG +
Preference number: 4 (lower is better)
Translates to: GGPGALVHGRSRLHSSAHAMICC*IRCRGR
Trigger: CCTGCCTCTGCATCTAATGCAGCAACAGATCATGGC...ATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTACCAGGGCACCAGGCCCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR GCA 90 bp ATACCCAAGGGGCAGAGCAGCCAGCTGGACCTGCTCTGTAATTCACTTACTTACTGCACCCCGCCGCCATaGCTTCAGTTGGGTGGGCCT +
Preference number: 4 (lower is better)
Translates to: IPKGQSSQLDLLCNSLTYCTPPP*LQLGGP
Trigger: AGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCA...GTAAGTAAGTGAATTACAGAGCAGGTCCAGCTGGCTGCTCTGCCCCTTGGGTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR GCA 90 bp CTTAAGCAGCACCACCAGTCCCCAGAGGACAAGAGCAGCTATATCTCATCCACCCCCTGGCACAGTACCTaGCCTGTCGGAGGCTCTCAC +
Preference number: 4 (lower is better)
Translates to: LKQHHQSPEDKSSYISSTPWHST*PVGGSH
Trigger: GTGAGAGCCTCCGACAGGGCAGGTACTGTGCCAGGG...GGTGGATGAGATATAGCTGCTCTTGTCCTCTGGGGACTGGTGGTGCTGCTTAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR GCA 90 bp GGCCTTAGCCACAAACGCCTTCCGACTAACCAGCTTGGTGCCGTAGCTCAGGCACACCTTCCGGAGGAGTaGTTTGCTTGGAAGGGGTCT +
Preference number: 4 (lower is better)
Translates to: GLSHKRLPTNQLGAVAQAHLPEE*FAWKGS
Trigger: AGACCCCTTCCAAGCAAAGCACTCCTCCGGAAGGTG...TGCCTGAGCTACGGCACCAAGCTGGTTAGTCGGAAGGCGTTTGTGGCTAAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR GCA 90 bp CCTTCCGGAGGAGTGCTTTGCTTGGAAGGGGTCTCCCTGGGGCCTTGGGTCTGCTGGAACCTGAGGTGTTaGCTGGATTGGTTTTGGCAT +
Preference number: 4 (lower is better)
Translates to: PSGGVLCLEGVSLGPWVCWNLRC*LDWFWH
Trigger: ATGCCAAAACCAATCCAGGCAACACCTCAGGTTCCA...GCAGACCCAAGGCCCCAGGGAGACCCCTTCCAAGCAAAGCACTCCTCCGGAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CCA 90 bp ACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGAGAGATCCTACAGGTaGGGGTGCAGAGGTGCTCAT +
Preference number: 4 (lower is better)
Translates to: TWEKQTPQQCPSGQWGRAERSYR*GCRGAH
Trigger: ATGAGCACCTCTGCACCCCCACCTGTAGGATCTCTC...TGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CCA 90 bp AGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTGGGGGCAGGTCGGCTGTTaGACGAGTTACCCTGTTTTT +
Preference number: 4 (lower is better)
Translates to: RSRLHSSAHLDNGAGQVWGQVGC*TSYPVF
Trigger: AAAAACAGGGTAACTCGTCCAACAGCCGACCTGCCC...CCAGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CCA 90 bp ACCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGGATTTGCCGCTTGAGTaGTTCCCGCCTTCTGTTTCT +
Preference number: 4 (lower is better)
Translates to: TFNFPLHPAAMPSVGWAWDLPLE*FPPSVS
Trigger: AGAAACAGAAGGCGGGAACCACTCAAGCGGCAAATC...CCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CCA 90 bp GCGCCGAGGGGCCTGTCAGTCTTTGGGAGTTCGGGCAAACTAGGGATGCAGGACGATTTGCCGCTTGAGTaGTTCCCGCCTTCTGTTTCT +
Preference number: 4 (lower is better)
Translates to: APRGLSVFGSSGKLGMQDDLPLE*FPPSVS
Trigger: AGAAACAGAAGGCGGGAACCACTCAAGCGGCAAATC...GTCCTGCATCCCTAGTTTGCCCGAACTCCCAAAGACTGACAGGCCCCTCGGCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR CCA 90 bp GAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTGGAACGCACATGGAGCTaGGTCCTCTTCAGCTACGAT +
Preference number: 4 (lower is better)
Translates to: EKQTPQQCPSGQWGRAGLERTWS*VLFSYD
Trigger: ATCGTAGCTGAAGAGGACCCAGCTCCATGTGCGTTC...CAGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CCA 90 bp TCCACCTTCCGGAGGAGTGCTTTGCTTGGAAGGGGTCTCCCTGGGGCCTTGGGTTACATTCCGTGCCATTaGCAGTACACTGGCGTCCAT +
Preference number: 4 (lower is better)
Translates to: STFRRSALLGRGLPGALGYIPCH*QYTGVH
Trigger: ATGGACGCCAGTGTACTGCCAATGGCACGGAATGTA...ACCCAAGGCCCCAGGGAGACCCCTTCCAAGCAAAGCACTCCTCCGGAAGGTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR CCA 90 bp CACCCCCAAAATAATCACACCAAATGGCCAAAGGGCTTTCTTTATCAGTTGGCCCAGAGGGCCCCGCCTTaGCCGCGCCTCTCCGTCTCC +
Preference number: 4 (lower is better)
Translates to: HPQNNHTKWPKGFLYQLAQRAPP*PRLSVS
Trigger: GGAGACGGAGAGGCGCGGCCAAGGCGGGGCCCTCTG...GGCCAACTGATAAAGAAAGCCCTTTGGCCATTTGGTGTGATTATTTTGGGGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000636627.1
CDS-3UTR CCA 90 bp GGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCAGACTCCACAGCAGTGCCCATTCGCCTGTCAGGATCTaGAACACTGTGAGAAGTGCT +
Preference number: 4 (lower is better)
Translates to: GGPGALVHGRSRLHSSAHSPVRI*NTVRSA
Trigger: AGCACTTCTCACAGTGTTCCAGATCCTGACAGGCGA...ATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTACCAGGGCACCAGGCCCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CCA 90 bp GAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTGTTCCTCTTCCCCTACTaGCACATCGCAAGGCGGATA +
Preference number: 4 (lower is better)
Translates to: EKQTPQQCPSGQWGRAGLFLFPY*HIARRI
Trigger: TATCCGCCTTGCGATGTGCCAGTAGGGGAAGAGGAA...CAGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CCA 90 bp CCTTCCGGAGGAGTGCTTTGCTTGGAAGGGGTCTCCCTGGGGCCTTGGGTCTGCTTGGTGAAGATGTGGTaGTTGATGAGCTTGTGGCAG +
Preference number: 4 (lower is better)
Translates to: PSGGVLCLEGVSLGPWVCLVKMW*LMSLWQ
Trigger: CTGCCACAAGCTCATCAACCACCACATCTTCACCAA...GCAGACCCAAGGCCCCAGGGAGACCCCTTCCAAGCAAAGCACTCCTCCGGAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR CCA 90 bp CCTCCTCACCCATCCTCTGTGAGAGGGCGGGGCCTGCTGTTTCCTGCAGCTGGGTCTTCACAACGGAGATaGCACTGGATTGAATCCCAA +
Preference number: 4 (lower is better)
Translates to: PPHPSSVRGRGLLFPAAGSSQRR*HWIESQ
Trigger: TTGGGATTCAATCCAGTGCCATCTCCGTTGTGAAGA...CCCAGCTGCAGGAAACAGCAGGCCCCGCCCTCTCACAGAGGATGGGTGAGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CCA 90 bp TCATCACCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGGCCACGAAGACGCACTaGACCACGTGCTTAAGTCCT +
Preference number: 4 (lower is better)
Translates to: SSPLTFPCTPPPCLQLGGATKTH*TTCLSP
Trigger: AGGACTTAAGCACGTGGTCCAGTGCGTCTTCGTGGC...CCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGGTGATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CCA 90 bp GCAGATGAGCCACGGCCCCGCTTCCACCTTCCGGAGGAGTGCTTTGCTTGGAAGTTCCCCTTGAACAACTaGACCCCGATACAGGCAAAC +
Preference number: 4 (lower is better)
Translates to: ADEPRPRFHLPEECFAWKFPLNN*TPIQAN
Trigger: GTTTGCCTGTATCGGGGTCCAGTTGTTCAAGGGGAA...CTTCCAAGCAAAGCACTCCTCCGGAAGGTGGAAGCGGGGCCGTGGCTCATCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CCA 90 bp TCCCTTTCACGAAAAAGAACCACCGTGAGCAACGTCCGCGACAGGCAGCCCTGGGTCACAGAGCTTCCCTaGGAGACAGGCCAGCATGAT +
Preference number: 4 (lower is better)
Translates to: SLSRKRTTVSNVRDRQPWVTELP*ETGQHD
Trigger: ATCATGCTGGCCTGTCTCCCAGGGAAGCTCTGTGAC...CCAGGGCTGCCTGTCGCGGACGTTGCTCACGGTGGTTCTTTTTCGTGAAAGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CCA 90 bp GCAGATGAGCCACGGCCCCGCTTCCACCTTCCGGAGGAGTGCTTTGCTTGGAAGCTCATCATCACCAGCTaGAGGGACAACTTGGTCAAG +
Preference number: 4 (lower is better)
Translates to: ADEPRPRFHLPEECFAWKLIITS*RDNLVK
Trigger: CTTGACCAAGTTGTCCCTCCAGCTGGTGATGATGAG...CTTCCAAGCAAAGCACTCCTCCGGAAGGTGGAAGCGGGGCCGTGGCTCATCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CCA 90 bp TACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCGGAATTGAAGGCCTTTaGACATGCAGGGGACGGTGG +
Preference number: 4 (lower is better)
Translates to: YMGEADSTAVPIWTMGQGGIEGL*TCRGRW
Trigger: CCACCGTCCCCTGCATGTCCAAAGGCCTTCAATTCC...GCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CCA 90 bp CTTAAGCAGCACCACCAGTCCCCAGAGGACAAGAGCAGCTATATCTCATCCACCGGTGGGATGCTGGGGTaGGAGGTAGTAGGCGTCTCC +
Preference number: 4 (lower is better)
Translates to: LKQHHQSPEDKSSYISSTGGMLG*EVVGVS
Trigger: GGAGACGCCTACTACCTCCCACCCCAGCATCCCACC...GGTGGATGAGATATAGCTGCTCTTGTCCTCTGGGGACTGGTGGTGCTGCTTAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR CCA 90 bp CACCAGTCCCCAGAGGACAAGAGCAGCTATATCTCATCCACCTATGCATTTCTGGACGGGACCTCTTCCTaGCTGCTCTGCCGGCGCAGG +
Preference number: 4 (lower is better)
Translates to: HQSPEDKSSYISSTYAFLDGTSS*LLCRRR
Trigger: CCTGCGCCGGCAGAGCAGCCAGGAAGAGGTCCCGTC...CAGAAATGCATAGGTGGATGAGATATAGCTGCTCTTGTCCTCTGGGGACTGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR CCA 90 bp ATACCCAAGGGGCAGAGCAGCCAGCTGGACCTGCTCTGTAATTCACTTACTTACGGCAGGGCCGTGCGATaGGGGAAGATGGGAGACGAC +
Preference number: 4 (lower is better)
Translates to: IPKGQSSQLDLLCNSLTYGRAVR*GKMGDD
Trigger: GTCGTCTCCCATCTTCCCCCATCGCACGGCCCTGCC...GTAAGTAAGTGAATTACAGAGCAGGTCCAGCTGGCTGCTCTGCCCCTTGGGTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR CCA 90 bp CAGACACTTAGGGTCCTGGTCTGGCAATTTTGGCCTGATGTGATGCCACAAGACGGCAGGGCCGTGCGATaGGGGAAGATGGGAGACGAC +
Preference number: 4 (lower is better)
Translates to: QTLRVLVWQFWPDVMPQDGRAVR*GKMGDD
Trigger: GTCGTCTCCCATCTTCCCCCATCGCACGGCCCTGCC...GTCTTGTGGCATCACATCAGGCCAAAATTGCCAGACCAGGACCCTAAGTGTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR CCA 90 bp AGGGACGGCAGGCTGCCGTTCACCTGGTCCAGGGCCTCTGACTGCTCCACTTGGCTCGGTGAGTACTTCTaGGCTTTACTTGAATCTAGG +
Preference number: 4 (lower is better)
Translates to: RDGRLPFTWSRASDCSTWLGEYF*ALLESR
Trigger: CCTAGATTCAAGTAAAGCCCAGAAGTACTCACCGAG...CCAAGTGGAGCAGTCAGAGGCCCTGGACCAGGTGAACGGCAGCCTGCCGTCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636448.1
CDS-3UTR CCA 90 bp CAGTCCCCAGAGGACAAGAGCAGCTATATCTCATCCACCTATGCATTTCTGCACGTAGGGAGGGGTTGCTaGAGGGGTGGCCCACGACCG +
Preference number: 4 (lower is better)
Translates to: QSPEDKSSYISSTYAFLHVGRGC*RGGPRP
Trigger: CGGTCGTGGGCCACCCCTCCAGCAACCCCTCCCTAC...GTGCAGAAATGCATAGGTGGATGAGATATAGCTGCTCTTGTCCTCTGGGGACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR CCA 90 bp ATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCAGACTCCAGACAGTCAGGCTGGCTaGTGTGAAAGTCCGGTAGGA +
Preference number: 4 (lower is better)
Translates to: MPSVGWAWCPGTWEKQTPDSQAG*CESPVG
Trigger: TCCTACCGGACTTTCACACCAGCCAGCCTGACTGTC...TGGAGTCTGCTTCTCCCATGTACCAGGGCACCAGGCCCACCCAACTGAAGGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CCA 90 bp AACCGTAACTATGGATACCCAAGGGGCAGAGCAGCCAGCTGGACCTGCTCTGTATGTTCCGGAAGCTGCTaGGGACAGTCAGGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: NRNYGYPRGRAASWTCSVCSGSC*GQSGWL
Trigger: CAGCCAGCCTGACTGTCCCCAGCAGCTTCCGGAACA...TACAGAGCAGGTCCAGCTGGCTGCTCTGCCCCTTGGGTATCCATAGTTACGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR CCA 90 bp CTTAAGCAGCACCACCAGTCCCCAGAGGACAAGAGCAGCTATATCTCATCCACCCTGGGGCCGAGCGCATaGTACTCTGCCAGGCTCAAC +
Preference number: 4 (lower is better)
Translates to: LKQHHQSPEDKSSYISSTLGPSA*YSARLN
Trigger: GTTGAGCCTGGCAGAGTACCATGCGCTCGGCCCCAG...GGTGGATGAGATATAGCTGCTCTTGTCCTCTGGGGACTGGTGGTGCTGCTTAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR CCA 90 bp CTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGAGGACGCAGTGTATTTaGGGGAAAGGGTTTAAAAAT +
Preference number: 4 (lower is better)
Translates to: LSPAPRRHAFSWVGLVPWRTQCI*GKGFKN
Trigger: ATTTTTAAACCCTTTCCCCCAAATACACTGCGTCCT...CCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CCA 90 bp GGAGGTCATGGCGGACTGGCATACAAAAGGAACTCTGTCAGCTCAGCGCCGAGGGGGCCTGTCAGTCTTTaGGAGTTCGGGCAAACTAGG +
Preference number: 4 (lower is better)
Translates to: GGHGGLAYKRNSVSSAPRGPVSL*EFGQTR
Trigger: CCTAGTTTGCCCGAACTCCCAAAGACTGACAGGCCC...CCTCGGCGCTGAGCTGACAGAGTTCCTTTTGTATGCCAGTCCGCCATGACCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CCA 90 bp CCTTCCGGAGGAGTGCTTTGCTTGGAAGGGGTCTCCCTGGGGCCTTGGGTCTGCCTTCTCACTGTATTCTaGACTGGGTCTCTGCAGAGA +
Preference number: 4 (lower is better)
Translates to: PSGGVLCLEGVSLGPWVCLLTVF*TGSLQR
Trigger: TCTCTGCAGAGACCCAGTCCAGAATACAGTGAGAAG...GCAGACCCAAGGCCCCAGGGAGACCCCTTCCAAGCAAAGCACTCCTCCGGAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CCA 90 bp TCCACCTTCCGGAGGAGTGCTTTGCTTGGAAGGGGTCTCCCTGGGGCCTTGGGTAGGTGTTGCCTGGATTaGTTTTGGCATGCGGGTGTA +
Preference number: 4 (lower is better)
Translates to: STFRRSALLGRGLPGALGRCCLD*FWHAGV
Trigger: TACACCCGCATGCCAAAACCAATCCAGGCAACACCT...ACCCAAGGCCCCAGGGAGACCCCTTCCAAGCAAAGCACTCCTCCGGAAGGTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CCA 90 bp AGCGCCGAGGGGCCTGTCAGTCTTTGGGAGTTCGGGCAAACTAGGGATGCAGGACCAAACTGGCCACTTTaGGTGTCTTGGGCTCAGCAT +
Preference number: 4 (lower is better)
Translates to: SAEGPVSLWEFGQTRDAGPNWPL*VSWAQH
Trigger: ATGCTGAGCCCAAGACACCCAAAGTGGCCAGTTTGG...TCCTGCATCCCTAGTTTGCCCGAACTCCCAAAGACTGACAGGCCCCTCGGCGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636938.1
3UTR CAA 72 bp GGTGGGATGCTGGGGTGGGAGGTAGTAGGCGTCTCCTaGGAGATCTCCGTGAATCATAGCAAACGGGCGAGT +
Preference number: 4 (lower is better)
Translates to: GGMLGWEVVGVS*EISVNHSKRAS
Trigger: ACTCGCCCGTTTGCTATGATTCACGGAGATCTCCAAGGAGACGCCTACTACCTCCCACCCCAGCATCCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636448.1
CDS-3UTR TCA 90 bp GGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTTTGGAGCTATTCGGCTaGGAAGTTGGTCCTTCACCA +
Preference number: 4 (lower is better)
Translates to: GEADSTAVPIWTMGQGRSLELFG*EVGPSP
Trigger: TGGTGAAGGACCAACTTCTCAGCCGAATAGCTCCAA...AGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR TCA 90 bp ATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTTGGAGCTATTCGGCTaGGAAGTTGGTCCTTCACCA +
Preference number: 4 (lower is better)
Translates to: MGEADSTAVPIWTMGQGRLELFG*EVGPSP
Trigger: TGGTGAAGGACCAACTTCTCAGCCGAATAGCTCCAA...CCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR TCA 90 bp TCATCACCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGAGGCACGGAGGGCTTTaGCATCAAAGCCTCCAGATT +
Preference number: 4 (lower is better)
Translates to: SSPLTFPCTPPPCLQLGGRHGGL*HQSLQI
Trigger: AATCTGGAGGCTTTGATGTCAAAGCCCTCCGTGCCT...CCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGGTGATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR TCA 90 bp CCTGGTACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGCACGGAGGGCTTTaGCATCAAAGCCTCCAGATT +
Preference number: 4 (lower is better)
Translates to: PGTWEKQTPQQCPSGQWGRHGGL*HQSLQI
Trigger: AATCTGGAGGCTTTGATGTCAAAGCCCTCCGTGCCT...GCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTACCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR TCA 90 bp TCCCTTTCACGAAAAAGAACCACCGTGAGCAACGTCCGCGACAGGCAGCCCTGGAGGCACGGAGGGCTTTaGCATCAAAGCCTCCAGATT +
Preference number: 4 (lower is better)
Translates to: SLSRKRTTVSNVRDRQPWRHGGL*HQSLQI
Trigger: AATCTGGAGGCTTTGATGTCAAAGCCCTCCGTGCCT...CCAGGGCTGCCTGTCGCGGACGTTGCTCACGGTGGTTCTTTTTCGTGAAAGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR TCA 90 bp CTTAAGCAGCACCACCAGTCCCCAGAGGACAAGAGCAGCTATATCTCATCCACCCTGGCGTCCATTCCCTaGGAACGCACATGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: LKQHHQSPEDKSSYISSTLASIP*ERTWSW
Trigger: CCAGCTCCATGTGCGTTCTCAGGGAATGGACGCCAG...GGTGGATGAGATATAGCTGCTCTTGTCCTCTGGGGACTGGTGGTGCTGCTTAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR TCA 90 bp TACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCTGTCCTCAGCTTGGGTaGTCCAATCCAAGTAGCCCT +
Preference number: 4 (lower is better)
Translates to: YMGEADSTAVPIWTMGQGCPQLG*SNPSSP
Trigger: AGGGCTACTTGGATTGGATCACCCAAGCTGAGGACA...GCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR TCA 90 bp GGCCTTAGCCACAAACGCCTTCCGACTAACCAGCTTGGTGCCGTAGCTCAGGCATGTCCTCAGCTTGGGTaGTCCAATCCAAGTAGCCCT +
Preference number: 4 (lower is better)
Translates to: GLSHKRLPTNQLGAVAQACPQLG*SNPSSP
Trigger: AGGGCTACTTGGATTGGATCACCCAAGCTGAGGACA...TGCCTGAGCTACGGCACCAAGCTGGTTAGTCGGAAGGCGTTTGTGGCTAAGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR TCA 90 bp TTTCAAGGCCTTAGCCACAAACGCCTTCCGACTAACCAGCTTGGTGCCGTAGCTCCAGCCAGTAAAACGTaGCAGACTTCACGGCGGCCC +
Preference number: 4 (lower is better)
Translates to: FQGLSHKRLPTNQLGAVAPASKT*QTSRRP
Trigger: GGGCCGCCGTGAAGTCTGTCACGTTTTACTGGCTGG...AGCTACGGCACCAAGCTGGTTAGTCGGAAGGCGTTTGTGGCTAAGGCCTTGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR TCA 90 bp GGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCAGACTCCACAGCAGTGCCCATAGTGCCTGGTCACTTTaGAGATTCTTAAGAGGCGCA +
Preference number: 4 (lower is better)
Translates to: GGPGALVHGRSRLHSSAHSAWSL*RFLRGA
Trigger: TGCGCCTCTTAAGAATCTTCAAAGTGACCAGGCACT...ATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTACCAGGGCACCAGGCCCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR TCA 90 bp GCGCCGAGGGGCCTGTCAGTCTTTGGGAGTTCGGGCAAACTAGGGATGCAGGACAGTGCCTGGTCACTTTaGAGATTCTTAAGAGGCGCA +
Preference number: 4 (lower is better)
Translates to: APRGLSVFGSSGKLGMQDSAWSL*RFLRGA
Trigger: TGCGCCTCTTAAGAATCTTCAAAGTGACCAGGCACT...GTCCTGCATCCCTAGTTTGCCCGAACTCCCAAAGACTGACAGGCCCCTCGGCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR TCA 90 bp GCGCCGAGGGGCCTGTCAGTCTTTGGGAGTTCGGGCAAACTAGGGATGCAGGACGGATCTGGAACACTGTaGGAAGTGCTTGAGGGAAAT +
Preference number: 4 (lower is better)
Translates to: APRGLSVFGSSGKLGMQDGSGTL*EVLEGN
Trigger: ATTTCCCTCAAGCACTTCTCACAGTGTTCCAGATCC...GTCCTGCATCCCTAGTTTGCCCGAACTCCCAAAGACTGACAGGCCCCTCGGCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR TCA 90 bp GAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTGGGATTGAATCCCAAATaGCACCAGAGACACCCCAAC +
Preference number: 4 (lower is better)
Translates to: EKQTPQQCPSGQWGRAGLGLNPK*HQRHPN
Trigger: GTTGGGGTGTCTCTGGTGTCATTTGGGATTCAATCC...CAGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR TCA 90 bp ATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGGATAGAACTTCCCCTTaGACAACTGGACCCCGATAC +
Preference number: 4 (lower is better)
Translates to: MGEADSTAVPIWTMGQGRDRTSP*TTGPRY
Trigger: GTATCGGGGTCCAGTTGTTCAAGGGGAAGTTCTATC...CCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR TCA 90 bp AGCGCCGAGGGGCCTGTCAGTCTTTGGGAGTTCGGGCAAACTAGGGATGCAGGAGATAGAACTTCCCCTTaGACAACTGGACCCCGATAC +
Preference number: 4 (lower is better)
Translates to: SAEGPVSLWEFGQTRDAGDRTSP*TTGPRY
Trigger: GTATCGGGGTCCAGTTGTTCAAGGGGAAGTTCTATC...TCCTGCATCCCTAGTTTGCCCGAACTCCCAAAGACTGACAGGCCCCTCGGCGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR TCA 90 bp GCAGATGAGCCACGGCCCCGCTTCCACCTTCCGGAGGAGTGCTTTGCTTGGAAGTGTCCATGGCATCATTaGACATCTTGGACTGCTCGT +
Preference number: 4 (lower is better)
Translates to: ADEPRPRFHLPEECFAWKCPWHH*TSWTAR
Trigger: ACGAGCAGTCCAAGATGTTCAATGATGCCATGGACA...CTTCCAAGCAAAGCACTCCTCCGGAAGGTGGAAGCGGGGCCGTGGCTCATCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR TCA 90 bp ACCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGGAGATTGGCATTTGTTaGGGTGGGAACTTGCTTTCC +
Preference number: 4 (lower is better)
Translates to: TFNFPLHPAAMPSVGWAWEIGIC*GGNLLS
Trigger: GGAAAGCAAGTTCCCACCTCAACAAATGCCAATCTC...CCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR TCA 90 bp CCTGGTACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGCAGTGGGGGTCCCTaGAATAGCCATGTATCTCTG +
Preference number: 4 (lower is better)
Translates to: PGTWEKQTPQQCPSGQWGSSGGP*NSHVSL
Trigger: CAGAGATACATGGCTATTTCAGGGACCCCCACTGCT...GCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTACCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR TCA 90 bp AACCGTAACTATGGATACCCAAGGGGCAGAGCAGCCAGCTGGACCTGCTCTGTAGCAGGCACTCAAAGTTaGAGGAGGATCTCCGGTGGG +
Preference number: 4 (lower is better)
Translates to: NRNYGYPRGRAASWTCSVAGTQS*RRISGG
Trigger: CCCACCGGAGATCCTCCTTCAACTTTGAGTGCCTGC...TACAGAGCAGGTCCAGCTGGCTGCTCTGCCCCTTGGGTATCCATAGTTACGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR TCA 90 bp TACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCGGCCGGCAACTGCCATaGTCTGTTGCTGCATTAGAT +
Preference number: 4 (lower is better)
Translates to: YMGEADSTAVPIWTMGQGGRQLP*SVAALD
Trigger: ATCTAATGCAGCAACAGATCATGGCAGTTGCCGGCC...GCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR TCA 90 bp TACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCGGTCGAGTGACTCGGTaGGTACTTCTGGGCTTTACT +
Preference number: 4 (lower is better)
Translates to: YMGEADSTAVPIWTMGQGGRVTR*VLLGFT
Trigger: AGTAAAGCCCAGAAGTACTCACCGAGTCACTCGACC...GCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR TCA 90 bp AGAATCCTTGGGGATGATGGTAGCCTCGGGGCCTCTCAGAGTCGATGTTTCTGCCCATCTCGTCGATGGTaGGGTCACAGGCATCAGCGA +
Preference number: 4 (lower is better)
Translates to: RILGDDGSLGASQSRCFCPSRRW*GHRHQR
Trigger: TCGCTGATGCCTGTGACCTCACCATCGACGAGATGG...GCAGAAACATCGACTCTGAGAGGCCCCGAGGCTACCATCATCCCCAAGGATTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636448.1
CDS-3UTR TCA 90 bp GAAAGTCCGGTAGGAGATGTCGGGCTCGTCTGTGTACCAGGAGCTGCGGTGCAGGGGGCTACAAGGTGGTaGTGCATATCATTTCATCCG +
Preference number: 4 (lower is better)
Translates to: ESPVGDVGLVCVPGAAVQGATRW*CISFHP
Trigger: CGGATGAAATGATATGCATCACCACCTTGTAGCCCC...CTGCACCGCAGCTCCTGGTACACAGACGAGCCCGACATCTCCTACCGGACTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636448.1
CDS-3UTR TCA 90 bp CCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTCTGGTAGCTGGGTTCTaGCTTACTTACACACCGTAT +
Preference number: 4 (lower is better)
Translates to: PLTFPCTPPPCLQLGGPGLVAGF*LTYTPY
Trigger: ATACGGTGTGTAAGTAAGTCAGAACCCAGCTACCAG...ACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR TCA 90 bp TCATCACCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCAGTTGCCCTTAGCGTaGCAGTCAGAAACCGACCAT +
Preference number: 4 (lower is better)
Translates to: SSPLTFPCTPPPCLQLGGQLPLA*QSETDH
Trigger: ATGGTCGGTTTCTGACTGTCACGCTAAGGGCAACTG...CCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGGTGATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR TCA 90 bp GGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCAGACTCCACAGCAGTGCCCATGATTTTGAGATGGCTTaGCAGAGACTTCCACAGCAG +
Preference number: 4 (lower is better)
Translates to: GGPGALVHGRSRLHSSAHDFEMA*QRLPQQ
Trigger: CTGCTGTGGAAGTCTCTGTCAAGCCATCTCAAAATC...ATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTACCAGGGCACCAGGCCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350061.11
ENST00000422281.7
CDS-3UTR GCA 90 bp ATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGAAGTCTGGTGCCTCTTaGATAGTTTGCCTCGTTCGC +
Preference number: 4 (lower is better)
Translates to: MGEADSTAVPIWTMGQGRKSGAS*IVCLVR
Trigger: GCGAACGAGGCAAACTATGCAAGAGGCACCAGACTT...CCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR GCA 90 bp ACCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGCTGGAAATCTCCCCGTaGTTTTGCCTTCTCTCTTTC +
Preference number: 4 (lower is better)
Translates to: TFNFPLHPAAMPSVGWAWLEISP*FCLLSF
Trigger: GAAAGAGAGAAGGCAAAAGCACGGGGAGATTTCCAG...CCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR GCA 90 bp GCGCCGAGGGGCCTGTCAGTCTTTGGGAGTTCGGGCAAACTAGGGATGCAGGACCTCAGGGAAGTCCAGTaGCTGGTCACTTTGAAGATT +
Preference number: 4 (lower is better)
Translates to: APRGLSVFGSSGKLGMQDLREVQ*LVTLKI
Trigger: AATCTTCAAAGTGACCAGGCACTGGACTTCCCTGAG...GTCCTGCATCCCTAGTTTGCCCGAACTCCCAAAGACTGACAGGCCCCTCGGCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR GCA 90 bp ATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTTGCCGCCAAACAGCTaGATCCCAAGCAAGGAAAAG +
Preference number: 4 (lower is better)
Translates to: MGEADSTAVPIWTMGQGRLPPNS*IPSKEK
Trigger: CTTTTCCTTGCTTGGGATGCAGCTGTTTGGCGGCAA...CCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR GCA 90 bp GCTCCGCAGATGAGCCACGGCCCCGCTTCCACCTTCCGGAGGAGTGCTTTGCTTTTGAAATCACTGTTTTaGCAGATCCGTTCACGGACC +
Preference number: 4 (lower is better)
Translates to: APQMSHGPASTFRRSALLLKSLF*QIRSRT
Trigger: GGTCCGTGAACGGATCTGGCAAAACAGTGATTTCAA...AAGCAAAGCACTCCTCCGGAAGGTGGAAGCGGGGCCGTGGCTCATCTGCGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR GCA 90 bp GCGCCGAGGGGCCTGTCAGTCTTTGGGAGTTCGGGCAAACTAGGGATGCAGGACAGTTCTTCATTAGCTTaGTCCAGGTTCCCTTCGGTC +
Preference number: 4 (lower is better)
Translates to: APRGLSVFGSSGKLGMQDSSSLA*SRFPSV
Trigger: GACCGAAGGGAACCTGGAGCAAGCTAATGAAGAACT...GTCCTGCATCCCTAGTTTGCCCGAACTCCCAAAGACTGACAGGCCCCTCGGCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR GCA 90 bp TACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCTCTGGCCCAATGTCATaGAGTGTCCTTAATCCCGCC +
Preference number: 4 (lower is better)
Translates to: YMGEADSTAVPIWTMGQGSGPMS*SVLNPA
Trigger: GGCGGGATTAAGGACACTGCATGACATTGGGCCAGA...GCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR GCA 90 bp GAAATGGCGCTCCCTGCGGCTGGTATTAGGTTACCATTGGCACCGAAGGAACCAGCTCAAGGTTCCCAATaGTGGGCCGCTTTCCATGGG +
Preference number: 4 (lower is better)
Translates to: EMALPAAGIRLPLAPKEPAQGSQ*WAAFHG
Trigger: CCCATGGAAAGCGGCCCAGCATTGGGAACCTTGAGC...TGGTTCCTTCGGTGCCAATGGTAACCTAATACCAGCCGCAGGGAGCGCCATTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR GCA 90 bp GGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCAGAGTCGATGTTTCTaGCTGGGTATCTGCTGTAGT +
Preference number: 4 (lower is better)
Translates to: GGPGALVHGRSRLHSSAHQSRCF*LGICCS
Trigger: ACTACAGCAGATACCCAGGCAGAAACATCGACTCTG...ATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTACCAGGGCACCAGGCCCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR GCA 90 bp GAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTGCTGTCCGCACTCCTCTaGTTGTCGCTGTTTTTGTTC +
Preference number: 4 (lower is better)
Translates to: EKQTPQQCPSGQWGRAGLLSALL*LSLFLF
Trigger: GAACAAAAACAGCGACAAGCAGAGGAGTGCGGACAG...CAGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR GCA 90 bp CTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGTTACCTGGTTGCGAGTaGATTATTATTCCAGTTTAC +
Preference number: 4 (lower is better)
Translates to: LSPAPRRHAFSWVGLVPWLPGCE*IIIPVY
Trigger: GTAAACTGGAATAATAATGCACTCGCAACCAGGTAA...CCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR GCA 90 bp CGGTGCAGGGACGGCAGGCTGCCGTTCACCTGGTCCAGGGCCTCTGACTGCTCCAGGACCCATGGATATTaGTGCAGTTCAAATACAATA +
Preference number: 4 (lower is better)
Translates to: RCRDGRLPFTWSRASDCSRTHGY*CSSNTI
Trigger: TATTGTATTTGAACTGCAGCAATATCCATGGGTCCT...GGAGCAGTCAGAGGCCCTGGACCAGGTGAACGGCAGCCTGCCGTCCCTGCACCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636448.1
CDS-3UTR GCA 90 bp CCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCAGCCAGCTGGACCTaGTCTGTAATTCACTTACTT +
Preference number: 4 (lower is better)
Translates to: PLTFPCTPPPCLQLGGPGAASWT*SVIHLL
Trigger: AAGTAAGTGAATTACAGAGCAGGTCCAGCTGGCTGC...ACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR GCA 90 bp CTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGACCTTGAAGTGTTTTTaGCTGGATCAGAGTAAGAAT +
Preference number: 4 (lower is better)
Translates to: LSPAPRRHAFSWVGLVPWTLKCF*LDQSKN
Trigger: ATTCTTACTCTGATCCAGGCAAAAACACTTCAAGGT...CCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR GCA 90 bp GAGCTGCGGTGCAGGGACGGCAGGCTGCCGTTCACCTGGTCCAGGGCCTCTGACGTGCTTAGGCTTAAATaGGATGACTTTCAAAACCAT +
Preference number: 4 (lower is better)
Translates to: ELRCRDGRLPFTWSRASDVLRLK*DDFQNH
Trigger: ATGGTTTTGAAAGTCATCGCATTTAAGCCTAAGCAC...GTCAGAGGCCCTGGACCAGGTGAACGGCAGCCTGCCGTCCCTGCACCGCAGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636448.1
CDS-3UTR CCA 90 bp GTGTCTTGGGCTCAGCATCAGATGTACAGACTCCAACCACCACTTGGAATCAGCGAGGCGGGGGCGGAATaGGGAAGGGGATCACCAAGA +
Preference number: 4 (lower is better)
Translates to: VSWAQHQMYRLQPPLGISEAGAE*GRGSPR
Trigger: TCTTGGTGATCCCCTTCCCCATTCCGCCCCCGCCTC...GCTGATTCCAAGTGGTGGTTGGAGTCTGTACATCTGATGCTGAGCCCAAGACAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636938.1
CDS-3UTR CCA 90 bp TGCAACCCATGGTGGATCCAAAGGTACAGTATCAAAATCATGGAACTCTTGCCCTGCAGGGCACTGTGCTaGGCGTTGAGGCGGGGGCGG +
Preference number: 4 (lower is better)
Translates to: CNPWWIQRYSIKIMELLPCRALC*ALRRGR
Trigger: CCGCCCCCGCCTCAACGCCCAGCACAGTGCCCTGCA...GGGCAAGAGTTCCATGATTTTGATACTGTACCTTTGGATCCACCATGGGTTGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR CCA 90 bp ACCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGACAGGACAGTTTGCTTaGAGCTATTCGGCTGAGAAG +
Preference number: 4 (lower is better)
Translates to: TFNFPLHPAAMPSVGWAWTGQFA*SYSAEK
Trigger: CTTCTCAGCCGAATAGCTCCAAGCAAACTGTCCTGT...CCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CCA 90 bp GCGCCGAGGGGCCTGTCAGTCTTTGGGAGTTCGGGCAAACTAGGGATGCAGGACACAGGACAGTTTGCTTaGAGCTATTCGGCTGAGAAG +
Preference number: 4 (lower is better)
Translates to: APRGLSVFGSSGKLGMQDTGQFA*SYSAEK
Trigger: CTTCTCAGCCGAATAGCTCCAAGCAAACTGTCCTGT...GTCCTGCATCCCTAGTTTGCCCGAACTCCCAAAGACTGACAGGCCCCTCGGCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR CCA 90 bp TACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCGAGGTGCTCATAGTTTaGGCAGCCTTGGCCTGTCTA +
Preference number: 4 (lower is better)
Translates to: YMGEADSTAVPIWTMGQGEVLIV*AALACL
Trigger: TAGACAGGCCAAGGCTGCCCAAACTATGAGCACCTC...GCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CCA 90 bp TCCCTTTCACGAAAAAGAACCACCGTGAGCAACGTCCGCGACAGGCAGCCCTGGGAGGTGCTCATAGTTTaGGCAGCCTTGGCCTGTCTA +
Preference number: 4 (lower is better)
Translates to: SLSRKRTTVSNVRDRQPWEVLIV*AALACL
Trigger: TAGACAGGCCAAGGCTGCCCAAACTATGAGCACCTC...CCAGGGCTGCCTGTCGCGGACGTTGCTCACGGTGGTTCTTTTTCGTGAAAGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR CCA 90 bp CCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGGACAACTTGTAAACTaGGCACTCCTGACACTAGTC +
Preference number: 4 (lower is better)
Translates to: PLTFPCTPPPCLQLGGPGGQLVN*ALLTLV
Trigger: GACTAGTGTCAGGAGTGCCCAGTTTACAAGTTGTCC...ACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CCA 90 bp ATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTACATTCCGTGCCATTaGCAGTACACTGGCGTCCAT +
Preference number: 4 (lower is better)
Translates to: MGEADSTAVPIWTMGQGRYIPCH*QYTGVH
Trigger: ATGGACGCCAGTGTACTGCCAATGGCACGGAATGTA...CCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CCA 90 bp AGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTGGTACATTCCGTGCCATTaGCAGTACACTGGCGTCCAT +
Preference number: 4 (lower is better)
Translates to: RSRLHSSAHLDNGAGQVWYIPCH*QYTGVH
Trigger: ATGGACGCCAGTGTACTGCCAATGGCACGGAATGTA...CCAGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CCA 90 bp ATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCAGACTCCAGTTTGGATTTTGAGATaGCTTGACCCCACCGCCGAC +
Preference number: 4 (lower is better)
Translates to: MPSVGWAWCPGTWEKQTPVWILR*LDPTAD
Trigger: GTCGGCGGTGGGGTCAAGCCATCTCAAAATCCAAAC...TGGAGTCTGCTTCTCCCATGTACCAGGGCACCAGGCCCACCCAACTGAAGGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288139.11
CDS-3UTR CCA 90 bp GCTCCGCAGATGAGCCACGGCCCCGCTTCCACCTTCCGGAGGAGTGCTTTGCTTGAGACGAAATATGCTTaGAGGCCCAAGCTGTACATT +
Preference number: 4 (lower is better)
Translates to: APQMSHGPASTFRRSALLETKYA*RPKLYI
Trigger: AATGTACAGCTTGGGCCTCCAAGCATATTTCGTCTC...AAGCAAAGCACTCCTCCGGAAGGTGGAAGCGGGGCCGTGGCTCATCTGCGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR CCA 90 bp AACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTTCACTGTTGGCTATCTaGTTGACTTCTGGTTTGTTG +
Preference number: 4 (lower is better)
Translates to: NFPLHPAAMPSVGWAWCPSLLAI*LTSGLL
Trigger: CAACAAACCAGAAGTCAACCAGATAGCCAACAGTGA...AGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CCA 90 bp CCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCAGATTGGTGAAGATGTGGTaGTTGATGAGCTTGTGGCAG +
Preference number: 4 (lower is better)
Translates to: PPCLQLGGPGALVHGRSRLVKMW*LMSLWQ
Trigger: CTGCCACAAGCTCATCAACCACCACATCTTCACCAA...TCTGCTTCTCCCATGTACCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CCA 90 bp CACTCTCTGGACTTTCTGGAGACACTAGCATTAAAACCAAAGCACTGGCCAAGGAGGAGTGGCTGCGGATaGGGTCCTCTGCGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: HSLDFLETLALKPKHWPRRSGCG*GPLRPG
Trigger: CCCTGGCCGCAGAGGACCCCATCCGCAGCCACTCCT...CCTTGGCCAGTGCTTTGGTTTTAATGCTAGTGTCTCCAGAAAGTCCAGAGAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636627.1
CDS-3UTR CCA 90 bp TTTCCTGTGGACACGTTAAGATGGAACCTGAGGTGTTGCCTGGATTGGTTTTGGAGGAGTGGCTGCGGATaGGGTCCTCTGCGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: FPVDTLRWNLRCCLDWFWRSGCG*GPLRPG
Trigger: CCCTGGCCGCAGAGGACCCCATCCGCAGCCACTCCT...CCAAAACCAATCCAGGCAACACCTCAGGTTCCATCTTAACGTGTCCACAGGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR CCA 90 bp CCTTCCGGAGGAGTGCTTTGCTTGGAAGGGGTCTCCCTGGGGCCTTGGGTCTGCTCTTCACAACGGAGATaGCACTGGATTGAATCCCAA +
Preference number: 4 (lower is better)
Translates to: PSGGVLCLEGVSLGPWVCSSQRR*HWIESQ
Trigger: TTGGGATTCAATCCAGTGCCATCTCCGTTGTGAAGA...GCAGACCCAAGGCCCCAGGGAGACCCCTTCCAAGCAAAGCACTCCTCCGGAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CCA 90 bp GAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTGTTCCCCTTGAACAACTaGACCCCGATACAGGCAAAC +
Preference number: 4 (lower is better)
Translates to: EKQTPQQCPSGQWGRAGLFPLNN*TPIQAN
Trigger: GTTTGCCTGTATCGGGGTCCAGTTGTTCAAGGGGAA...CAGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CCA 90 bp AGCGCCGAGGGGCCTGTCAGTCTTTGGGAGTTCGGGCAAACTAGGGATGCAGGAACTGGTAGGGGTTTTTaGGGATGTATCTCCGCAAGG +
Preference number: 4 (lower is better)
Translates to: SAEGPVSLWEFGQTRDAGTGRGF*GCISAR
Trigger: CCTTGCGGAGATACATCCCCAAAAACCCCTACCAGT...TCCTGCATCCCTAGTTTGCCCGAACTCCCAAAGACTGACAGGCCCCTCGGCGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CCA 90 bp CCTTCCGGAGGAGTGCTTTGCTTGGAAGGGGTCTCCCTGGGGCCTTGGGTCTGCGCTGGAGGGACAACTTaGTCAAGTAATTTCATGCTG +
Preference number: 4 (lower is better)
Translates to: PSGGVLCLEGVSLGPWVCAGGTT*SSNFML
Trigger: CAGCATGAAATTACTTGACCAAGTTGTCCCTCCAGC...GCAGACCCAAGGCCCCAGGGAGACCCCTTCCAAGCAAAGCACTCCTCCGGAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CCA 90 bp GAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTGCTCATCATCACCAGCTaGAGGGACAACTTGGTCAAG +
Preference number: 4 (lower is better)
Translates to: EKQTPQQCPSGQWGRAGLLIITS*RDNLVK
Trigger: CTTGACCAAGTTGTCCCTCCAGCTGGTGATGATGAG...CAGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CCA 90 bp AGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTGGCTCATCATCACCAGCTaGAGGGACAACTTGGTCAAG +
Preference number: 4 (lower is better)
Translates to: RSRLHSSAHLDNGAGQVWLIITS*RDNLVK
Trigger: CTTGACCAAGTTGTCCCTCCAGCTGGTGATGATGAG...CCAGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CCA 90 bp CGACACTCCAATCCTATAGATCACCACGTTGCTCCTCTGTCCCCAGCACCCCTTCAAGGTTCCCAATGCTaGGCCGCTTTCCATGGGCAG +
Preference number: 4 (lower is better)
Translates to: RHSNPIDHHVAPLSPAPLQGSQC*AAFHGQ
Trigger: CTGCCCATGGAAAGCGGCCCAGCATTGGGAACCTTG...AAGGGGTGCTGGGGACAGAGGAGCAACGTGGTGATCTATAGGATTGGAGTGTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR CCA 90 bp AACCGTAACTATGGATACCCAAGGGGCAGAGCAGCCAGCTGGACCTGCTCTGTATTTGCCTGCTCCAGGTaGGCGAGCTGTCATCCTCGT +
Preference number: 4 (lower is better)
Translates to: NRNYGYPRGRAASWTCSVFACSR*ASCHPR
Trigger: ACGAGGATGACAGCTCGCCCACCTGGAGCAGGCAAA...TACAGAGCAGGTCCAGCTGGCTGCTCTGCCCCTTGGGTATCCATAGTTACGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR CCA 90 bp AGAATCCTTGGGGATGATGGTAGCCTCGGGGCCTCTCAGAGTCGATGTTTCTGCCCAGGCTCAACCGCTTaGGACCTGTTCCTACCAGGT +
Preference number: 4 (lower is better)
Translates to: RILGDDGSLGASQSRCFCPGSTA*DLFLPG
Trigger: ACCTGGTAGGAACAGGTCCCAAGCGGTTGAGCCTGG...GCAGAAACATCGACTCTGAGAGGCCCCGAGGCTACCATCATCCCCAAGGATTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636448.1
CDS-3UTR CCA 90 bp CTTAAGCAGCACCACCAGTCCCCAGAGGACAAGAGCAGCTATATCTCATCCACCGCTGTTTCCTGCAGCTaGGGCCGAGCGCATGGTACT +
Preference number: 4 (lower is better)
Translates to: LKQHHQSPEDKSSYISSTAVSCS*GRAHGT
Trigger: AGTACCATGCGCTCGGCCCCAGCTGCAGGAAACAGC...GGTGGATGAGATATAGCTGCTCTTGTCCTCTGGGGACTGGTGGTGCTGCTTAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR CCA 90 bp ATACCCAAGGGGCAGAGCAGCCAGCTGGACCTGCTCTGTAATTCACTTACTTACTGCCCATCTGGACAATaGGGCAGGGCAGGTCTGGCC +
Preference number: 4 (lower is better)
Translates to: IPKGQSSQLDLLCNSLTYCPSGQ*GRAGLA
Trigger: GGCCAGACCTGCCCTGCCCCATTGTCCAGATGGGCA...GTAAGTAAGTGAATTACAGAGCAGGTCCAGCTGGCTGCTCTGCCCCTTGGGTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR CCA 90 bp CTTAAGCAGCACCACCAGTCCCCAGAGGACAAGAGCAGCTATATCTCATCCACCACAGCAGTGCCCATCTaGACAATGGGGCAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: LKQHHQSPEDKSSYISSTTAVPI*TMGQGR
Trigger: CCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGT...GGTGGATGAGATATAGCTGCTCTTGTCCTCTGGGGACTGGTGGTGCTGCTTAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR CCA 90 bp CGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCAAGTTGCAACCCATGGTaGATCCAAAGGTACAGTATC +
Preference number: 4 (lower is better)
Translates to: RRHAFSWVGLVPWYMGEASCNPW*IQRYSI
Trigger: GATACTGTACCTTTGGATCCACCATGGGTTGCAACT...TGCTTCTCCCATGTACCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR CCA 90 bp CTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGTTACTTACCAGAGGGTaGTTCAAGTCAAACAAACAA +
Preference number: 4 (lower is better)
Translates to: LSPAPRRHAFSWVGLVPWLLTRG*FKSNKQ
Trigger: TTGTTTGTTTGACTTGAACCACCCTCTGGTAAGTAA...CCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR CCA 90 bp TCCACCTTCCGGAGGAGTGCTTTGCTTGGAAGGGGTCTCCCTGGGGCCTTGGGTTCTGTAGGGCAATTGTaGTGTTCTTCGCAGGGTACT +
Preference number: 4 (lower is better)
Translates to: STFRRSALLGRGLPGALGSVGQL*CSSQGT
Trigger: AGTACCCTGCGAAGAACACCACAATTGCCCTACAGA...ACCCAAGGCCCCAGGGAGACCCCTTCCAAGCAAAGCACTCCTCCGGAAGGTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CCA 90 bp AGCCACAAACGCCTTCCGACTAACCAGCTTGGTGCCGTAGCTCAGGCAGAAAATGAGGAGTGCTTTGCTTaGAAGGGGTCTCCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: SHKRLPTNQLGAVAQAENEECFA*KGSPWG
Trigger: GCCCCAGGGAGACCCCTTCCAAGCAAAGCACTCCTC...ATTTTCTGCCTGAGCTACGGCACCAAGCTGGTTAGTCGGAAGGCGTTTGTGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000636938.1
ENST00000638120.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CCA 90 bp GCTCCGCAGATGAGCCACGGCCCCGCTTCCACCTTCCGGAGGAGTGCTTTGCTTTGCAGGACTTTGGAATaGAGTCAGATACCCACCTTA +
Preference number: 4 (lower is better)
Translates to: APQMSHGPASTFRRSALLCRTLE*SQIPTL
Trigger: TAAGGTGGGTATCTGACTCCATTCCAAAGTCCTGCA...AAGCAAAGCACTCCTCCGGAAGGTGGAAGCGGGGCCGTGGCTCATCTGCGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CCA 90 bp GGAGGTCATGGCGGACTGGCATACAAAAGGAACTCTGTCAGCTCAGCGCCGAGGACGCTCAGGAGGTCATaGCGGACTGGCATACAAAAG +
Preference number: 4 (lower is better)
Translates to: GGHGGLAYKRNSVSSAPRTLRRS*RTGIQK
Trigger: CTTTTGTATGCCAGTCCGCCATGACCTCCTGAGCGT...CCTCGGCGCTGAGCTGACAGAGTTCCTTTTGTATGCCAGTCCGCCATGACCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CCA 90 bp AGCGCCGAGGGGCCTGTCAGTCTTTGGGAGTTCGGGCAAACTAGGGATGCAGGAGATGAGGTTTGGGTGTaGTGGTGTTTCCTGTGGACA +
Preference number: 4 (lower is better)
Translates to: SAEGPVSLWEFGQTRDAGDEVWV*WCFLWT
Trigger: TGTCCACAGGAAACACCACCACACCCAAACCTCATC...TCCTGCATCCCTAGTTTGCCCGAACTCCCAAAGACTGACAGGCCCCTCGGCGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000645528.2
3UTR CAA 72 bp ATAGCAAACGGGCGAGTCATCGTCCTCCAAGAATCCTaGGGGATGATGGTAGCCTCGGGGCCTCTCAGAGTC +
Preference number: 4 (lower is better)
Translates to: IANGRVIVLQES*GMMVASGPLRV
Trigger: GACTCTGAGAGGCCCCGAGGCTACCATCATCCCCAAGGATTCTTGGAGGACGATGACTCGCCCGTTTGCTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636448.1
CDS-3UTR TCA 90 bp GCTGTTTCAGTAGAAATAAGCCCACTTGAGACTTTTCCCTTTCAAGGCCTTAGCCACTGTGCTGGGCGTTaGGGCGGGGGCGGAATGGGG +
Preference number: 4 (lower is better)
Translates to: AVSVEISPLETFPFQGLSHCAGR*GGGGMG
Trigger: CCCCATTCCGCCCCCGCCTCAACGCCCAGCACAGTG...GCTAAGGCCTTGAAAGGGAAAAGTCTCAAGTGGGCTTATTTCTACTGAAACAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636938.1
CDS-3UTR TCA 90 bp GGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTCTCTTGGCGTATTGCTaGCGTTTTCTTTGGGAGAGA +
Preference number: 4 (lower is better)
Translates to: GEADSTAVPIWTMGQGRSLLAYC*RFLWER
Trigger: TCTCTCCCAAAGAAAACGTCAGCAATACGCCAAGAG...AGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR TCA 90 bp CTTAAGCAGCACCACCAGTCCCCAGAGGACAAGAGCAGCTATATCTCATCCACCGGCCCCCGTAAGCCATaGTGCCATCGTACATCACAG +
Preference number: 4 (lower is better)
Translates to: LKQHHQSPEDKSSYISSTGPRKP*CHRTSQ
Trigger: CTGTGATGTACGATGGCATCATGGCTTACGGGGGCC...GGTGGATGAGATATAGCTGCTCTTGTCCTCTGGGGACTGGTGGTGCTGCTTAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR TCA 90 bp GGTTCCCTGACTCCCAGTGTCCTTGAAACTAGACCACACTGCTTCCAAAGAGGCGGCCCCCGTAAGCCATaGTGCCATCGTACATCACAG +
Preference number: 4 (lower is better)
Translates to: GSLTPSVLETRPHCFQRGGPRKP*CHRTSQ
Trigger: CTGTGATGTACGATGGCATCATGGCTTACGGGGGCC...GCCTCTTTGGAAGCAGTGTGGTCTAGTTTCAAGGACACTGGGAGTCAGGGAACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636938.1
CDS-3UTR TCA 90 bp GGCCTTAGCCACAAACGCCTTCCGACTAACCAGCTTGGTGCCGTAGCTCAGGCAGGATTGAATCCCAAATaGCACCAGAGACACCCCAAC +
Preference number: 4 (lower is better)
Translates to: GLSHKRLPTNQLGAVAQAGLNPK*HQRHPN
Trigger: GTTGGGGTGTCTCTGGTGTCATTTGGGATTCAATCC...TGCCTGAGCTACGGCACCAAGCTGGTTAGTCGGAAGGCGTTTGTGGCTAAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR TCA 90 bp CCTGGTACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCGATAGAACTTCCCCTTaGACAACTGGACCCCGATAC +
Preference number: 4 (lower is better)
Translates to: PGTWEKQTPQQCPSGQWGDRTSP*TTGPRY
Trigger: GTATCGGGGTCCAGTTGTTCAAGGGGAAGTTCTATC...GCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTACCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR TCA 90 bp TCCACCTTCCGGAGGAGTGCTTTGCTTGGAAGGGGTCTCCCTGGGGCCTTGGGTGGACGTTGTCGAAGTTaGAATCACTGTTTTGCCAGA +
Preference number: 4 (lower is better)
Translates to: STFRRSALLGRGLPGALGGRCRS*NHCFAR
Trigger: TCTGGCAAAACAGTGATTTCAACTTCGACAACGTCC...ACCCAAGGCCCCAGGGAGACCCCTTCCAAGCAAAGCACTCCTCCGGAAGGTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR TCA 90 bp ATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTGTCCATGGCATCATTaGACATCTTGGACTGCTCGT +
Preference number: 4 (lower is better)
Translates to: MGEADSTAVPIWTMGQGRCPWHH*TSWTAR
Trigger: ACGAGCAGTCCAAGATGTTCAATGATGCCATGGACA...CCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR TCA 90 bp GGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTTGCGTCGAAGCAGAGTaGCCACATCAAGGTGTTTTA +
Preference number: 4 (lower is better)
Translates to: GEADSTAVPIWTMGQGRSCVEAE*PHQGVL
Trigger: TAAAACACCTTGATGTGGTCACTCTGCTTCGACGCA...AGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR TCA 90 bp ATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGGTGGTATTGGTCTGCTaGAGGGAATCTCTCCTATCA +
Preference number: 4 (lower is better)
Translates to: MGEADSTAVPIWTMGQGRVVLVC*RESLLS
Trigger: TGATAGGAGAGATTCCCTTCAGCAGACCAATACCAC...CCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR TCA 90 bp CCTCCTCACCCATCCTCTGTGAGAGGGCGGGGCCTGCTGTTTCCTGCAGCTGGGGGTTTATGGCTTTCTTaGGGCATGACATCTCTTATA +
Preference number: 4 (lower is better)
Translates to: PPHPSSVRGRGLLFPAAGGLWLS*GMTSLI
Trigger: TATAAGAGATGTCATGCCTCAAGAAAGCCATAAACC...CCCAGCTGCAGGAAACAGCAGGCCCCGCCCTCTCACAGAGGATGGGTGAGGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR TCA 90 bp CGACACTCCAATCCTATAGATCACCACGTTGCTCCTCTGTCCCCAGCACCCCTTGTTGGGCCCAGTGACTaGTATGCTAGACCGATGGCT +
Preference number: 4 (lower is better)
Translates to: RHSNPIDHHVAPLSPAPLVGPSD*YARPMA
Trigger: AGCCATCGGTCTAGCATATCAGTCACTGGGCCCAAC...AAGGGGTGCTGGGGACAGAGGAGCAACGTGGTGATCTATAGGATTGGAGTGTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR TCA 90 bp GGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTCTGGTAGCTGGGTTCTaGCTTACTTACACACCGTAT +
Preference number: 4 (lower is better)
Translates to: GEADSTAVPIWTMGQGRSLVAGF*LTYTPY
Trigger: ATACGGTGTGTAAGTAAGTCAGAACCCAGCTACCAG...AGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR TCA 90 bp CGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCACTTCTCTCTTTCCTTTaGGAATTCTCCGCTCAATAC +
Preference number: 4 (lower is better)
Translates to: RRHAFSWVGLVPWYMGEALLSFL*EFSAQY
Trigger: GTATTGAGCGGAGAATTCTCAAAGGAAAGAGAGAAG...TGCTTCTCCCATGTACCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350061.11
ENST00000422281.7
CDS-3UTR TCA 90 bp TCCCTTTCACGAAAAAGAACCACCGTGAGCAACGTCCGCGACAGGCAGCCCTGGACAGATGGGGGAAACTaGGGCACAGAGAGGTTAAGT +
Preference number: 4 (lower is better)
Translates to: SLSRKRTTVSNVRDRQPWTDGGN*GTERLS
Trigger: ACTTAACCTCTCTGTGCCTCAGTTTCCCCCATCTGT...CCAGGGCTGCCTGTCGCGGACGTTGCTCACGGTGGTTCTTTTTCGTGAAAGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000645528.2
CDS-3UTR GCA 90 bp TGTACAGACTCCAACCACCACTTGGAATCAGCTGAGAATTCAAGATCAGACACCGTGTGCAGGGCACTGTaGTGGGCGTTGAGGCGGGGG +
Preference number: 4 (lower is better)
Translates to: CTDSNHHLESAENSRSDTVCRAL*WALRRG
Trigger: CCCCCGCCTCAACGCCCAGCACAGTGCCCTGCACAC...GGTGTCTGATCTTGAATTCTCAGCTGATTCCAAGTGGTGGTTGGAGTCTGTACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636938.1
CDS-3UTR GCA 90 bp ACCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGAAAGAGGAAGTCTGGTaGCTCTTGCATAGTTTGCCT +
Preference number: 4 (lower is better)
Translates to: TFNFPLHPAAMPSVGWAWKEEVW*LLHSLP
Trigger: AGGCAAACTATGCAAGAGGCACCAGACTTCCTCTTT...CCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR GCA 90 bp GGCCTTAGCCACAAACGCCTTCCGACTAACCAGCTTGGTGCCGTAGCTCAGGCAGCATCGATTGCAGCTTaGCAAGACAGGACAGTTTGC +
Preference number: 4 (lower is better)
Translates to: GLSHKRLPTNQLGAVAQAASIAA*QDRTVC
Trigger: GCAAACTGTCCTGTCTTGGCAAGCTGCAATCGATGC...TGCCTGAGCTACGGCACCAAGCTGGTTAGTCGGAAGGCGTTTGTGGCTAAGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR GCA 90 bp TCCCTTTCACGAAAAAGAACCACCGTGAGCAACGTCCGCGACAGGCAGCCCTGGTCTAGCAGCATCGATTaGAGCTTGCCAAGACAGGAC +
Preference number: 4 (lower is better)
Translates to: SLSRKRTTVSNVRDRQPWSSSID*SLPRQD
Trigger: GTCCTGTCTTGGCAAGCTGCAATCGATGCTGCTAGA...CCAGGGCTGCCTGTCGCGGACGTTGCTCACGGTGGTTCTTTTTCGTGAAAGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR GCA 90 bp AACCGTAACTATGGATACCCAAGGGGCAGAGCAGCCAGCTGGACCTGCTCTGTACAAAGCCTCCAGATTTaGCGCTTGAGTGGTTCCCGC +
Preference number: 4 (lower is better)
Translates to: NRNYGYPRGRAASWTCSVQSLQI*RLSGSR
Trigger: GCGGGAACCACTCAAGCGGCAAATCTGGAGGCTTTG...TACAGAGCAGGTCCAGCTGGCTGCTCTGCCCCTTGGGTATCCATAGTTACGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR GCA 90 bp GAGCTTCCTGGCCTGTCCACTTCTCACTGTATTCTGGACTGGGTCTCTGCAGAGCAAAGCCTCCAGATTTaGCGCTTGAGTGGTTCCCGC +
Preference number: 4 (lower is better)
Translates to: ELPGLSTSHCILDWVSAEQSLQI*RLSGSR
Trigger: GCGGGAACCACTCAAGCGGCAAATCTGGAGGCTTTG...CTCTGCAGAGACCCAGTCCAGAATACAGTGAGAAGTGGACAGGCCAGGAAGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR GCA 90 bp ATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGCTGGAAATCTCCCCGTaGTTTTGCCTTCTCTCTTTC +
Preference number: 4 (lower is better)
Translates to: MGEADSTAVPIWTMGQGRLEISP*FCLLSF
Trigger: GAAAGAGAGAAGGCAAAAGCACGGGGAGATTTCCAG...CCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR GCA 90 bp GCGCCGAGGGGCCTGTCAGTCTTTGGGAGTTCGGGCAAACTAGGGATGCAGGACGGAAATTGTCAAAGGTaGTCCGCTTGGTTTGCGTTT +
Preference number: 4 (lower is better)
Translates to: APRGLSVFGSSGKLGMQDGNCQR*SAWFAF
Trigger: AAACGCAAACCAAGCGGAGCACCTTTGACAATTTCC...GTCCTGCATCCCTAGTTTGCCCGAACTCCCAAAGACTGACAGGCCCCTCGGCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR GCA 90 bp CCTCCTCACCCATCCTCTGTGAGAGGGCGGGGCCTGCTGTTTCCTGCAGCTGGGGAACACTGTGAGAAGTaGTTGAGGGAAATTGTCAAA +
Preference number: 4 (lower is better)
Translates to: PPHPSSVRGRGLLFPAAGEHCEK*LREIVK
Trigger: TTTGACAATTTCCCTCAAGCACTTCTCACAGTGTTC...CCCAGCTGCAGGAAACAGCAGGCCCCGCCCTCTCACAGAGGATGGGTGAGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR GCA 90 bp CCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTTTGAAATCACTGTTTTaGCAGATCCGTTCACGGACC +
Preference number: 4 (lower is better)
Translates to: PLTFPCTPPPCLQLGGPGLKSLF*QIRSRT
Trigger: GGTCCGTGAACGGATCTGGCAAAACAGTGATTTCAA...ACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR GCA 90 bp CCTGGTACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCTCTCCGCAAGGGACGTaGTTTCAAGGCGTATTCAAC +
Preference number: 4 (lower is better)
Translates to: PGTWEKQTPQQCPSGQWGSPQGT*FQGVFN
Trigger: GTTGAATACGCCTTGAAAGCACGTCCCTTGCGGAGA...GCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTACCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR GCA 90 bp CCTTCCGGAGGAGTGCTTTGCTTGGAAGGGGTCTCCCTGGGGCCTTGGGTCTGCAGACAATGGCAAAGTTaGTCCCACATGTATACTCCT +
Preference number: 4 (lower is better)
Translates to: PSGGVLCLEGVSLGPWVCRQWQS*SHMYTP
Trigger: AGGAGTATACATGTGGGAGCAACTTTGCCATTGTCT...GCAGACCCAAGGCCCCAGGGAGACCCCTTCCAAGCAAAGCACTCCTCCGGAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR GCA 90 bp ATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGAGTTCTTCATTAGCTTaGTCCAGGTTCCCTTCGGTC +
Preference number: 4 (lower is better)
Translates to: MGEADSTAVPIWTMGQGRSSSLA*SRFPSV
Trigger: GACCGAAGGGAACCTGGAGCAAGCTAATGAAGAACT...CCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR GCA 90 bp CCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTCCATTTTCAGACACATaGTCAAGGTTCCCAATGCTG +
Preference number: 4 (lower is better)
Translates to: PLTFPCTPPPCLQLGGPGPFSDT*SRFPML
Trigger: CAGCATTGGGAACCTTGAGCATGTGTCTGAAAATGG...ACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR GCA 90 bp AGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTGGACTGCCATGATCTGTTaGTGCATTAGATGCAGAGGC +
Preference number: 4 (lower is better)
Translates to: RSRLHSSAHLDNGAGQVWTAMIC*CIRCRG
Trigger: GCCTCTGCATCTAATGCAGCAACAGATCATGGCAGT...CCAGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR GCA 90 bp GACTTACTTACACACCGTATTTCAGAACAGCTAAACAGGAACCAGGACGCAGTGGCAGGGACGGCAGGCTaGCGTTCACCTGGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: DLLTHRISEQLNRNQDAVAGTAG*RSPGPG
Trigger: CCCTGGACCAGGTGAACGGCAGCCTGCCGTCCCTGC...CACTGCGTCCTGGTTCCTGTTTAGCTGTTCTGAAATACGGTGTGTAAGTAAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR GCA 90 bp GGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTAAATTTTGGGTCCCTTaGATAGCGTCCCAAGCCTTC +
Preference number: 4 (lower is better)
Translates to: GEADSTAVPIWTMGQGRSKFWVP*IASQAF
Trigger: GAAGGCTTGGGACGCTATGCAAGGGACCCAAAATTT...AGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR GCA 90 bp ACCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTATCTCATCCACCTATaGATTTCTGCACCAGCGATG +
Preference number: 4 (lower is better)
Translates to: TFNFPLHPAAMPSVGWAWYLIHL*ISAPAM
Trigger: CATCGCTGGTGCAGAAATGCATAGGTGGATGAGATA...CCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR GCA 90 bp TACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCATTGCAGGGAATCCCTaGCAAGGTAACCTGACAGTC +
Preference number: 4 (lower is better)
Translates to: YMGEADSTAVPIWTMGQGIAGNP*QGNLTV
Trigger: GACTGTCAGGTTACCTTGGCAGGGATTCCCTGCAAT...GCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR GCA 90 bp CCTTCCGGAGGAGTGCTTTGCTTGGAAGGGGTCTCCCTGGGGCCTTGGGTCTGCCTTTCTCTGAGTCTCTaGTTGGAAGGGAAAACTGTT +
Preference number: 4 (lower is better)
Translates to: PSGGVLCLEGVSLGPWVCLSLSL*LEGKTV
Trigger: AACAGTTTTCCCTTCCAAGCAGAGACTCAGAGAAAG...GCAGACCCAAGGCCCCAGGGAGACCCCTTCCAAGCAAAGCACTCCTCCGGAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR GCA 90 bp GCTCCGCAGATGAGCCACGGCCCCGCTTCCACCTTCCGGAGGAGTGCTTTGCTTCTTTCTCTGAGTCTCTaGTTGGAAGGGAAAACTGTT +
Preference number: 4 (lower is better)
Translates to: APQMSHGPASTFRRSALLLSLSL*LEGKTV
Trigger: AACAGTTTTCCCTTCCAAGCAGAGACTCAGAGAAAG...AAGCAAAGCACTCCTCCGGAAGGTGGAAGCGGGGCCGTGGCTCATCTGCGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR GCA 90 bp TTTCAAGGCCTTAGCCACAAACGCCTTCCGACTAACCAGCTTGGTGCCGTAGCTCAGCAACCCCAAGGCTaGTGGACACAACCAGGTCTC +
Preference number: 4 (lower is better)
Translates to: FQGLSHKRLPTNQLGAVAQQPQG*WTQPGL
Trigger: GAGACCTGGTTGTGTCCAGCAGCCTTGGGGTTGCTG...AGCTACGGCACCAAGCTGGTTAGTCGGAAGGCGTTTGTGGCTAAGGCCTTGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638120.1
CDS-3UTR CCA 90 bp ATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGGGACAACTTGTAAACTaGGCACTCCTGACACTAGTC +
Preference number: 4 (lower is better)
Translates to: MGEADSTAVPIWTMGQGRGQLVN*ALLTLV
Trigger: GACTAGTGTCAGGAGTGCCCAGTTTACAAGTTGTCC...CCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CCA 90 bp CCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCAGAAACAAAATACACCCATaGCCATTCCCATCCTATCGC +
Preference number: 4 (lower is better)
Translates to: PPCLQLGGPGALVHGRSRNKIHP*PFPSYR
Trigger: GCGATAGGATGGGAATGGCCATGGGTGTATTTTGTT...TCTGCTTCTCCCATGTACCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288139.11
CDS-3UTR CCA 90 bp GCGCCGAGGGGCCTGTCAGTCTTTGGGAGTTCGGGCAAACTAGGGATGCAGGACAACAAAATACACCCATaGCCATTCCCATCCTATCGC +
Preference number: 4 (lower is better)
Translates to: APRGLSVFGSSGKLGMQDNKIHP*PFPSYR
Trigger: GCGATAGGATGGGAATGGCCATGGGTGTATTTTGTT...GTCCTGCATCCCTAGTTTGCCCGAACTCCCAAAGACTGACAGGCCCCTCGGCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR CCA 90 bp GCGCCGAGGGGCCTGTCAGTCTTTGGGAGTTCGGGCAAACTAGGGATGCAGGACCTGTGTCAACCAATCTaGCTGATTGTAGTGCTCAGA +
Preference number: 4 (lower is better)
Translates to: APRGLSVFGSSGKLGMQDLCQPI*LIVVLR
Trigger: TCTGAGCACTACAATCAGCCAGATTGGTTGACACAG...GTCCTGCATCCCTAGTTTGCCCGAACTCCCAAAGACTGACAGGCCCCTCGGCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR CCA 90 bp CCTCCTCACCCATCCTCTGTGAGAGGGCGGGGCCTGCTGTTTCCTGCAGCTGGGCCAAGAGGACTTTGTTaGCAATATCTTGAATCTGTG +
Preference number: 4 (lower is better)
Translates to: PPHPSSVRGRGLLFPAAGPRGLC*QYLESV
Trigger: CACAGATTCAAGATATTGCCAACAAAGTCCTCTTGG...CCCAGCTGCAGGAAACAGCAGGCCCCGCCCTCTCACAGAGGATGGGTGAGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CCA 90 bp CCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGAGACGAAATATGCTTaGAGGCCCAAGCTGTACATT +
Preference number: 4 (lower is better)
Translates to: PLTFPCTPPPCLQLGGPGETKYA*RPKLYI
Trigger: AATGTACAGCTTGGGCCTCCAAGCATATTTCGTCTC...ACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CCA 90 bp CCTTCCGGAGGAGTGCTTTGCTTGGAAGGGGTCTCCCTGGGGCCTTGGGTCTGCTCACTGTTGGCTATCTaGTTGACTTCTGGTTTGTTG +
Preference number: 4 (lower is better)
Translates to: PSGGVLCLEGVSLGPWVCSLLAI*LTSGLL
Trigger: CAACAAACCAGAAGTCAACCAGATAGCCAACAGTGA...GCAGACCCAAGGCCCCAGGGAGACCCCTTCCAAGCAAAGCACTCCTCCGGAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR CCA 90 bp GAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTGTTGGTGAAGATGTGGTaGTTGATGAGCTTGTGGCAG +
Preference number: 4 (lower is better)
Translates to: EKQTPQQCPSGQWGRAGLLVKMW*LMSLWQ
Trigger: CTGCCACAAGCTCATCAACCACCACATCTTCACCAA...CAGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CCA 90 bp AGCGCCGAGGGGCCTGTCAGTCTTTGGGAGTTCGGGCAAACTAGGGATGCAGGACAGAAGGCCCCTTTGTaGAGGAAAGCTCCAAAAGTT +
Preference number: 4 (lower is better)
Translates to: SAEGPVSLWEFGQTRDAGQKAPL*RKAPKV
Trigger: AACTTTTGGAGCTTTCCTCCACAAAGGGGCCTTCTG...TCCTGCATCCCTAGTTTGCCCGAACTCCCAAAGACTGACAGGCCCCTCGGCGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CCA 90 bp TCCACCTTCCGGAGGAGTGCTTTGCTTGGAAGGGGTCTCCCTGGGGCCTTGGGTCTTCAGGGTTACTTTTaGCTTCATCCGTACAGCGAT +
Preference number: 4 (lower is better)
Translates to: STFRRSALLGRGLPGALGLQGYF*LHPYSD
Trigger: ATCGCTGTACGGATGAAGCCAAAAGTAACCCTGAAG...ACCCAAGGCCCCAGGGAGACCCCTTCCAAGCAAAGCACTCCTCCGGAAGGTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CCA 90 bp ACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGCGGTGGTTGTAGATTaGGCCGATGTTCTCTCCATT +
Preference number: 4 (lower is better)
Translates to: TWEKQTPQQCPSGQWGRAAVVVD*ADVLSI
Trigger: AATGGAGAGAACATCGGCCCAATCTACAACCACCGC...TGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CCA 90 bp TCATCACCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGGCGGTGGTTGTAGATTaGGCCGATGTTCTCTCCATT +
Preference number: 4 (lower is better)
Translates to: SSPLTFPCTPPPCLQLGGAVVVD*ADVLSI
Trigger: AATGGAGAGAACATCGGCCCAATCTACAACCACCGC...CCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGGTGATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CCA 90 bp GGCCTTAGCCACAAACGCCTTCCGACTAACCAGCTTGGTGCCGTAGCTCAGGCAGCGGTGGTTGTAGATTaGGCCGATGTTCTCTCCATT +
Preference number: 4 (lower is better)
Translates to: GLSHKRLPTNQLGAVAQAAVVVD*ADVLSI
Trigger: AATGGAGAGAACATCGGCCCAATCTACAACCACCGC...TGCCTGAGCTACGGCACCAAGCTGGTTAGTCGGAAGGCGTTTGTGGCTAAGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636938.1
ENST00000638120.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CCA 90 bp CCTGGTACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCACTGGTAGGGGTTTTTaGGGATGTATCTCCGCAAGG +
Preference number: 4 (lower is better)
Translates to: PGTWEKQTPQQCPSGQWGTGRGF*GCISAR
Trigger: CCTTGCGGAGATACATCCCCAAAAACCCCTACCAGT...GCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTACCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CCA 90 bp GGAGGTCATGGCGGACTGGCATACAAAAGGAACTCTGTCAGCTCAGCGCCGAGGACTGGTAGGGGTTTTTaGGGATGTATCTCCGCAAGG +
Preference number: 4 (lower is better)
Translates to: GGHGGLAYKRNSVSSAPRTGRGF*GCISAR
Trigger: CCTTGCGGAGATACATCCCCAAAAACCCCTACCAGT...CCTCGGCGCTGAGCTGACAGAGTTCCTTTTGTATGCCAGTCCGCCATGACCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CCA 90 bp GGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCAGACTCCACAGCAGTGCCCATGCCTGGGGAAACGTCTaGAAGTTATTGTTCCTATTG +
Preference number: 4 (lower is better)
Translates to: GGPGALVHGRSRLHSSAHAWGNV*KLLFLL
Trigger: CAATAGGAACAATAACTTCCAGACGTTTCCCCAGGC...ATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTACCAGGGCACCAGGCCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CCA 90 bp GGCCTTAGCCACAAACGCCTTCCGACTAACCAGCTTGGTGCCGTAGCTCAGGCACTCATCATCACCAGCTaGAGGGACAACTTGGTCAAG +
Preference number: 4 (lower is better)
Translates to: GLSHKRLPTNQLGAVAQALIITS*RDNLVK
Trigger: CTTGACCAAGTTGTCCCTCCAGCTGGTGATGATGAG...TGCCTGAGCTACGGCACCAAGCTGGTTAGTCGGAAGGCGTTTGTGGCTAAGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636938.1
ENST00000638120.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CCA 90 bp CTTAAGCAGCACCACCAGTCCCCAGAGGACAAGAGCAGCTATATCTCATCCACCCAAGGTTCCCAATGCTaGGCCGCTTTCCATGGGCAG +
Preference number: 4 (lower is better)
Translates to: LKQHHQSPEDKSSYISSTQGSQC*AAFHGQ
Trigger: CTGCCCATGGAAAGCGGCCCAGCATTGGGAACCTTG...GGTGGATGAGATATAGCTGCTCTTGTCCTCTGGGGACTGGTGGTGCTGCTTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR CCA 90 bp ACCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGATAGCCATGTATCTCTaGGTCTTCCCGGCAAATAGT +
Preference number: 4 (lower is better)
Translates to: TFNFPLHPAAMPSVGWAWIAMYL*VFPANS
Trigger: ACTATTTGCCGGGAAGACCCAGAGATACATGGCTAT...CCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CCA 90 bp TCATCACCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGGTCGATGTTTCTGCCTaGGTATCTGCTGTAGTAGCC +
Preference number: 4 (lower is better)
Translates to: SSPLTFPCTPPPCLQLGGVDVSA*VSAVVA
Trigger: GGCTACTACAGCAGATACCCAGGCAGAAACATCGAC...CCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGGTGATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CCA 90 bp CCAAGGGGCAGAGCAGCCAGCTGGACCTGCTCTGTAATTCACTTACTTACTTACAAGGAGGATCTCCGGTaGGATGCTGGGGTGGGAGGT +
Preference number: 4 (lower is better)
Translates to: PRGRAASWTCSVIHLLTYKEDLR*DAGVGG
Trigger: ACCTCCCACCCCAGCATCCCACCGGAGATCCTCCTT...GTAAGTAAGTAAGTGAATTACAGAGCAGGTCCAGCTGGCTGCTCTGCCCCTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR CCA 90 bp CACCAGTCCCCAGAGGACAAGAGCAGCTATATCTCATCCACCTATGCATTTCTGAGGCTGCCGTTCACCTaGTCCAGGGCCTCTGACTGC +
Preference number: 4 (lower is better)
Translates to: HQSPEDKSSYISSTYAFLRLPFT*SRASDC
Trigger: GCAGTCAGAGGCCCTGGACCAGGTGAACGGCAGCCT...CAGAAATGCATAGGTGGATGAGATATAGCTGCTCTTGTCCTCTGGGGACTGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR CCA 90 bp ATACCCAAGGGGCAGAGCAGCCAGCTGGACCTGCTCTGTAATTCACTTACTTACCAGTCTGCCCCTCGCTaGGGGCTACAAGGTGGTGAT +
Preference number: 4 (lower is better)
Translates to: IPKGQSSQLDLLCNSLTYQSAPR*GLQGGD
Trigger: ATCACCACCTTGTAGCCCCCAGCGAGGGGCAGACTG...GTAAGTAAGTGAATTACAGAGCAGGTCCAGCTGGCTGCTCTGCCCCTTGGGTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR CCA 90 bp CAGACACTTAGGGTCCTGGTCTGGCAATTTTGGCCTGATGTGATGCCACAAGACGCTGTTTCCTGCAGCTaGGGCCGAGCGCATGGTACT +
Preference number: 4 (lower is better)
Translates to: QTLRVLVWQFWPDVMPQDAVSCS*GRAHGT
Trigger: AGTACCATGCGCTCGGCCCCAGCTGCAGGAAACAGC...GTCTTGTGGCATCACATCAGGCCAAAATTGCCAGACCAGGACCCTAAGTGTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR CCA 90 bp ATACCCAAGGGGCAGAGCAGCCAGCTGGACCTGCTCTGTAATTCACTTACTTACACAGCAGTGCCCATCTaGACAATGGGGCAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: IPKGQSSQLDLLCNSLTYTAVPI*TMGQGR
Trigger: CCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGT...GTAAGTAAGTGAATTACAGAGCAGGTCCAGCTGGCTGCTCTGCCCCTTGGGTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR CCA 90 bp CTTAAGCAGCACCACCAGTCCCCAGAGGACAAGAGCAGCTATATCTCATCCACCATGCCTTCAGTTGGGTaGGCCTGGTGCCCTGGTACA +
Preference number: 4 (lower is better)
Translates to: LKQHHQSPEDKSSYISSTMPSVG*AWCPGT
Trigger: TGTACCAGGGCACCAGGCCCACCCAACTGAAGGCAT...GGTGGATGAGATATAGCTGCTCTTGTCCTCTGGGGACTGGTGGTGCTGCTTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR CCA 90 bp ATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGGACAGTTGCAACCCATaGTGGATCCAAAGGTACAGT +
Preference number: 4 (lower is better)
Translates to: MGEADSTAVPIWTMGQGRDSCNP*WIQRYS
Trigger: ACTGTACCTTTGGATCCACCATGGGTTGCAACTGTC...CCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR CCA 90 bp GAAATGGCGCTCCCTGCGGCTGGTATTAGGTTACCATTGGCACCGAAGGAACCAGTCGGAGGCTCTCACTaGCAAATGACAGCTCTGTGC +
Preference number: 4 (lower is better)
Translates to: EMALPAAGIRLPLAPKEPVGGSH*QMTALC
Trigger: GCACAGAGCTGTCATTTGCCAGTGAGAGCCTCCGAC...TGGTTCCTTCGGTGCCAATGGTAACCTAATACCAGCCGCAGGGAGCGCCATTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR CCA 90 bp CGACACTCCAATCCTATAGATCACCACGTTGCTCCTCTGTCCCCAGCACCCCTTGTCGGAGGCTCTCACTaGCAAATGACAGCTCTGTGC +
Preference number: 4 (lower is better)
Translates to: RHSNPIDHHVAPLSPAPLVGGSH*QMTALC
Trigger: GCACAGAGCTGTCATTTGCCAGTGAGAGCCTCCGAC...AAGGGGTGCTGGGGACAGAGGAGCAACGTGGTGATCTATAGGATTGGAGTGTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR CCA 90 bp GGCCTTAGCCACAAACGCCTTCCGACTAACCAGCTTGGTGCCGTAGCTCAGGCAGAGGTCATGGCGGACTaGCATACAAAAGGAACTCTG +
Preference number: 4 (lower is better)
Translates to: GLSHKRLPTNQLGAVAQAEVMAD*HTKGTL
Trigger: CAGAGTTCCTTTTGTATGCCAGTCCGCCATGACCTC...TGCCTGAGCTACGGCACCAAGCTGGTTAGTCGGAAGGCGTTTGTGGCTAAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR TCA 90 bp CCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTTTCGGATGGGGTTATTaGGTGATAAACAGAAAAGGG +
Preference number: 4 (lower is better)
Translates to: PLTFPCTPPPCLQLGGPGFGWGY*VINRKG
Trigger: CCCTTTTCTGTTTATCACTCAATAACCCCATCCGAA...ACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR TCA 90 bp GCAGATGAGCCACGGCCCCGCTTCCACCTTCCGGAGGAGTGCTTTGCTTGGAAGTTCGGATGGGGTTATTaGGTGATAAACAGAAAAGGG +
Preference number: 4 (lower is better)
Translates to: ADEPRPRFHLPEECFAWKFGWGY*VINRKG
Trigger: CCCTTTTCTGTTTATCACTCAATAACCCCATCCGAA...CTTCCAAGCAAAGCACTCCTCCGGAAGGTGGAAGCGGGGCCGTGGCTCATCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR TCA 90 bp AGCCACAAACGCCTTCCGACTAACCAGCTTGGTGCCGTAGCTCAGGCAGAAAATTCCAGATTTGCCGCTTaGGTGGTTCCCGCCTTCTGT +
Preference number: 4 (lower is better)
Translates to: SHKRLPTNQLGAVAQAENSRFAA*VVPAFC
Trigger: ACAGAAGGCGGGAACCACTCAAGCGGCAAATCTGGA...ATTTTCTGCCTGAGCTACGGCACCAAGCTGGTTAGTCGGAAGGCGTTTGTGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR TCA 90 bp ACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAAGTGCCTGGTCACTTTaGAGATTCTTAAGAGGCGCA +
Preference number: 4 (lower is better)
Translates to: TWEKQTPQQCPSGQWGRASAWSL*RFLRGA
Trigger: TGCGCCTCTTAAGAATCTTCAAAGTGACCAGGCACT...TGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR TCA 90 bp ATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCAGACTCCAAGTGCCTGGTCACTTTaGAGATTCTTAAGAGGCGCA +
Preference number: 4 (lower is better)
Translates to: MPSVGWAWCPGTWEKQTPSAWSL*RFLRGA
Trigger: TGCGCCTCTTAAGAATCTTCAAAGTGACCAGGCACT...TGGAGTCTGCTTCTCCCATGTACCAGGGCACCAGGCCCACCCAACTGAAGGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR TCA 90 bp ACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGATCTGGAACACTGTaGGAAGTGCTTGAGGGAAAT +
Preference number: 4 (lower is better)
Translates to: TWEKQTPQQCPSGQWGRAGSGTL*EVLEGN
Trigger: ATTTCCCTCAAGCACTTCTCACAGTGTTCCAGATCC...TGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR TCA 90 bp GGAGGTCATGGCGGACTGGCATACAAAAGGAACTCTGTCAGCTCAGCGCCGAGGGGATCTGGAACACTGTaGGAAGTGCTTGAGGGAAAT +
Preference number: 4 (lower is better)
Translates to: GGHGGLAYKRNSVSSAPRGSGTL*EVLEGN
Trigger: ATTTCCCTCAAGCACTTCTCACAGTGTTCCAGATCC...CCTCGGCGCTGAGCTGACAGAGTTCCTTTTGTATGCCAGTCCGCCATGACCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR TCA 90 bp GGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCAGACTCCACAGCAGTGCCCATTGTTGGCTATCTGGTTaGCTTCTGGTTTGTTGTTCT +
Preference number: 4 (lower is better)
Translates to: GGPGALVHGRSRLHSSAHCWLSG*LLVCCS
Trigger: AGAACAACAAACCAGAAGTCAACCAGATAGCCAACA...ATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTACCAGGGCACCAGGCCCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR TCA 90 bp ATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGCATCCTTGTAGAGGATaGAAAGTCCCCTGCATTCTT +
Preference number: 4 (lower is better)
Translates to: MGEADSTAVPIWTMGQGRHPCRG*KVPCIL
Trigger: AAGAATGCAGGGGACTTTTCATCCTCTACAAGGATG...CCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR TCA 90 bp AGCGCCGAGGGGCCTGTCAGTCTTTGGGAGTTCGGGCAAACTAGGGATGCAGGACATCCTTGTAGAGGATaGAAAGTCCCCTGCATTCTT +
Preference number: 4 (lower is better)
Translates to: SAEGPVSLWEFGQTRDAGHPCRG*KVPCIL
Trigger: AAGAATGCAGGGGACTTTTCATCCTCTACAAGGATG...TCCTGCATCCCTAGTTTGCCCGAACTCCCAAAGACTGACAGGCCCCTCGGCGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR TCA 90 bp ATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGGGACGTTGTCGAAGTTaGAATCACTGTTTTGCCAGA +
Preference number: 4 (lower is better)
Translates to: MGEADSTAVPIWTMGQGRGRCRS*NHCFAR
Trigger: TCTGGCAAAACAGTGATTTCAACTTCGACAACGTCC...CCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR TCA 90 bp ATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCAGACTCCATGCGTCGAAGCAGAGTaGCCACATCAAGGTGTTTTA +
Preference number: 4 (lower is better)
Translates to: MPSVGWAWCPGTWEKQTPCVEAE*PHQGVL
Trigger: TAAAACACCTTGATGTGGTCACTCTGCTTCGACGCA...TGGAGTCTGCTTCTCCCATGTACCAGGGCACCAGGCCCACCCAACTGAAGGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR TCA 90 bp CGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCAGGGCACCATTTCTTTTaGACACATCATCTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: RRHAFSWVGLVPWYMGEAGHHFF*THHLLL
Trigger: AAGAAGAAGATGATGTGTTCAAAAGAAATGGTGCCC...TGCTTCTCCCATGTACCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR TCA 90 bp ACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGAGATTGGCATTTGTTaGGGTGGGAACTTGCTTTCC +
Preference number: 4 (lower is better)
Translates to: TWEKQTPQQCPSGQWGRAEIGIC*GGNLLS
Trigger: GGAAAGCAAGTTCCCACCTCAACAAATGCCAATCTC...TGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR TCA 90 bp TACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCGAGCTGTTCATCTCCTaGGTCGGACCTAATGTAAGT +
Preference number: 4 (lower is better)
Translates to: YMGEADSTAVPIWTMGQGELFIS*VGPNVS
Trigger: ACTTACATTAGGTCCGACTCAGGAGATGAACAGCTC...GCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR TCA 90 bp CGACACTCCAATCCTATAGATCACCACGTTGCTCCTCTGTCCCCAGCACCCCTTGGTCGAGTGACTCGGTaGGTACTTCTGGGCTTTACT +
Preference number: 4 (lower is better)
Translates to: RHSNPIDHHVAPLSPAPLGRVTR*VLLGFT
Trigger: AGTAAAGCCCAGAAGTACTCACCGAGTCACTCGACC...AAGGGGTGCTGGGGACAGAGGAGCAACGTGGTGATCTATAGGATTGGAGTGTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR TCA 90 bp CACCAGTCCCCAGAGGACAAGAGCAGCTATATCTCATCCACCTATGCATTTCTGCACGACCGGGTCGAGTaGCTCGGTGAGTACTTCTGG +
Preference number: 4 (lower is better)
Translates to: HQSPEDKSSYISSTYAFLHDRVE*LGEYFW
Trigger: CCAGAAGTACTCACCGAGTCACTCGACCCGGTCGTG...CAGAAATGCATAGGTGGATGAGATATAGCTGCTCTTGTCCTCTGGGGACTGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR TCA 90 bp CCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTCGTACAGTCAGAGTGTaGGTGCATTCTAATGAAAAC +
Preference number: 4 (lower is better)
Translates to: PLTFPCTPPPCLQLGGPGRTVRV*VHSNEN
Trigger: GTTTTCATTAGAATGCACTCACACTCTGACTGTACG...ACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR TCA 90 bp ACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGATTTTGAGATGGCTTaGCAGAGACTTCCACAGCAG +
Preference number: 4 (lower is better)
Translates to: TWEKQTPQQCPSGQWGRADFEMA*QRLPQQ
Trigger: CTGCTGTGGAAGTCTCTGTCAAGCCATCTCAAAATC...TGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350061.11
ENST00000422281.7
CDS-3UTR TCA 90 bp AGGTTTGGGTGTGGTGGTGTTTCCTGTGGACACGTTAAGATGGAACCTGAGGTGGAAAAAGAACCACCGTaGGCAACGTCCGCGACAGGC +
Preference number: 4 (lower is better)
Translates to: RFGCGGVSCGHVKMEPEVEKEPP*ATSATG
Trigger: GCCTGTCGCGGACGTTGCTCACGGTGGTTCTTTTTC...CACCTCAGGTTCCATCTTAACGTGTCCACAGGAAACACCACCACACCCAAACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000645528.2
CDS-3UTR GCA 90 bp AGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTGGAAAGAGGAAGTCTGGTaGCTCTTGCATAGTTTGCCT +
Preference number: 4 (lower is better)
Translates to: RSRLHSSAHLDNGAGQVWKEEVW*LLHSLP
Trigger: AGGCAAACTATGCAAGAGGCACCAGACTTCCTCTTT...CCAGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR GCA 90 bp TACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCCTCAGGGAAGTCCAGTaGCTGGTCACTTTGAAGATT +
Preference number: 4 (lower is better)
Translates to: YMGEADSTAVPIWTMGQGLREVQ*LVTLKI
Trigger: AATCTTCAAAGTGACCAGGCACTGGACTTCCCTGAG...GCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR GCA 90 bp CGACACTCCAATCCTATAGATCACCACGTTGCTCCTCTGTCCCCAGCACCCCTTAGGATGCCACTAAGTTaGTCAGGGAAGTCCAGTGCC +
Preference number: 4 (lower is better)
Translates to: RHSNPIDHHVAPLSPAPLRMPLS*SGKSSA
Trigger: GGCACTGGACTTCCCTGAGCAACTTAGTGGCATCCT...AAGGGGTGCTGGGGACAGAGGAGCAACGTGGTGATCTATAGGATTGGAGTGTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR GCA 90 bp GGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTGGAAATTGTCAAAGGTaGTCCGCTTGGTTTGCGTTT +
Preference number: 4 (lower is better)
Translates to: GEADSTAVPIWTMGQGRSGNCQR*SAWFAF
Trigger: AAACGCAAACCAAGCGGAGCACCTTTGACAATTTCC...AGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR GCA 90 bp CGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCAGAACACTGTGAGAAGTaGTTGAGGGAAATTGTCAAA +
Preference number: 4 (lower is better)
Translates to: RRHAFSWVGLVPWYMGEAEHCEK*LREIVK
Trigger: TTTGACAATTTCCCTCAAGCACTTCTCACAGTGTTC...TGCTTCTCCCATGTACCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR GCA 90 bp AGCGCCGAGGGGCCTGTCAGTCTTTGGGAGTTCGGGCAAACTAGGGATGCAGGATTGAAATCACTGTTTTaGCAGATCCGTTCACGGACC +
Preference number: 4 (lower is better)
Translates to: SAEGPVSLWEFGQTRDAGLKSLF*QIRSRT
Trigger: GGTCCGTGAACGGATCTGGCAAAACAGTGATTTCAA...TCCTGCATCCCTAGTTTGCCCGAACTCCCAAAGACTGACAGGCCCCTCGGCGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR GCA 90 bp ATACCCAAGGGGCAGAGCAGCCAGCTGGACCTGCTCTGTAATTCACTTACTTACCCAGGCCTCACCTGTTaGACACCTGAAGAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: IPKGQSSQLDLLCNSLTYPGLTC*TPEEQQ
Trigger: CTGCTGCTCTTCAGGTGTGCAACAGGTGAGGCCTGG...GTAAGTAAGTGAATTACAGAGCAGGTCCAGCTGGCTGCTCTGCCCCTTGGGTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR GCA 90 bp TCATCACCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGAGTTCTTCATTAGCTTaGTCCAGGTTCCCTTCGGTC +
Preference number: 4 (lower is better)
Translates to: SSPLTFPCTPPPCLQLGGSSSLA*SRFPSV
Trigger: GACCGAAGGGAACCTGGAGCAAGCTAATGAAGAACT...CCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGGTGATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR GCA 90 bp AACCGTAACTATGGATACCCAAGGGGCAGAGCAGCCAGCTGGACCTGCTCTGTATCTGGCCCAATGTCATaGAGTGTCCTTAATCCCGCC +
Preference number: 4 (lower is better)
Translates to: NRNYGYPRGRAASWTCSVSGPMS*SVLNPA
Trigger: GGCGGGATTAAGGACACTGCATGACATTGGGCCAGA...TACAGAGCAGGTCCAGCTGGCTGCTCTGCCCCTTGGGTATCCATAGTTACGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR GCA 90 bp ACCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTTCTGCCTGGGTATCTaGTGTAGTAGCCATAGTTTT +
Preference number: 4 (lower is better)
Translates to: TFNFPLHPAAMPSVGWAWFCLGI*CSSHSF
Trigger: AAAACTATGGCTACTACAGCAGATACCCAGGCAGAA...CCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR GCA 90 bp CACCAGTCCCCAGAGGACAAGAGCAGCTATATCTCATCCACCTATGCATTTCTGTCTTCCTGGCTGCTCTaGCGGCGCAGGCACTCAAAG +
Preference number: 4 (lower is better)
Translates to: HQSPEDKSSYISSTYAFLSSWLL*RRRHSK
Trigger: CTTTGAGTGCCTGCGCCGGCAGAGCAGCCAGGAAGA...CAGAAATGCATAGGTGGATGAGATATAGCTGCTCTTGTCCTCTGGGGACTGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR GCA 90 bp AGGAACCAGGAGGATAAGAATATCCATAATTTCAGAGCTGCCCTGGCACAGTACCTGTGTACCAGGAGCTaGGGTGCAGGGACGGCAGGC +
Preference number: 4 (lower is better)
Translates to: RNQEDKNIHNFRAALAQYLCTRS*GAGTAG
Trigger: GCCTGCCGTCCCTGCACCGCAGCTCCTGGTACACAG...GTACTGTGCCAGGGCAGCTCTGAAATTATGGATATTCTTATCCTCCTGGTTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR GCA 90 bp TTCCCAATGCTGGGCCGCTTTCCATGGGCAGCTTTGGACATATTGGCATTATTGGAGCGCATGGTACTCTaGCAGGCTCAACCGCTTGGG +
Preference number: 4 (lower is better)
Translates to: FPMLGRFPWAALDILALLERMVL*QAQPLG
Trigger: CCCAAGCGGTTGAGCCTGGCAGAGTACCATGCGCTC...CAATAATGCCAATATGTCCAAAGCTGCCCATGGAAAGCGGCCCAGCATTGGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636448.1
CDS-3UTR GCA 90 bp GACTTACTTACACACCGTATTTCAGAACAGCTAAACAGGAACCAGGACGCAGTGGGGCCTGCTGTTTCCTaGAGCTGGGGCCGAGCGCAT +
Preference number: 4 (lower is better)
Translates to: DLLTHRISEQLNRNQDAVGPAVS*SWGRAH
Trigger: ATGCGCTCGGCCCCAGCTGCAGGAAACAGCAGGCCC...CACTGCGTCCTGGTTCCTGTTTAGCTGTTCTGAAATACGGTGTGTAAGTAAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR GCA 90 bp TGCAGAGGCAGGGCCGTGCGATGGGGGAAGATGGGAGACGACGGGACCTCTTCCTTACCTGGTTGCGAGTaGATTATTATTCCAGTTTAC +
Preference number: 4 (lower is better)
Translates to: CRGRAVRWGKMGDDGTSSLPGCE*IIIPVY
Trigger: GTAAACTGGAATAATAATGCACTCGCAACCAGGTAA...GGAAGAGGTCCCGTCGTCTCCCATCTTCCCCCATCGCACGGCCCTGCCTCTGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636448.1
CDS-3UTR GCA 90 bp TTTCAAGGCCTTAGCCACAAACGCCTTCCGACTAACCAGCTTGGTGCCGTAGCTCTCTTCAGAGTTGTCTaGTTCGCTGAGGGCCACGTC +
Preference number: 4 (lower is better)
Translates to: FQGLSHKRLPTNQLGAVALFRVV*FAEGHV
Trigger: GACGTGGCCCTCAGCGAAGCAGACAACTCTGAAGAG...AGCTACGGCACCAAGCTGGTTAGTCGGAAGGCGTTTGTGGCTAAGGCCTTGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638120.1
CDS-3UTR CCA 90 bp AGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTGGCAGAAAGAGGAAGTCTaGTGCCTCTTGCATAGTTTG +
Preference number: 4 (lower is better)
Translates to: RSRLHSSAHLDNGAGQVWQKEEV*CLLHSL
Trigger: CAAACTATGCAAGAGGCACCAGACTTCCTCTTTCTG...CCAGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CCA 90 bp TCATCACCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGACAGGACAGTTTGCTTaGAGCTATTCGGCTGAGAAG +
Preference number: 4 (lower is better)
Translates to: SSPLTFPCTPPPCLQLGGTGQFA*SYSAEK
Trigger: CTTCTCAGCCGAATAGCTCCAAGCAAACTGTCCTGT...CCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGGTGATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CCA 90 bp CCTGGTACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCACAGGACAGTTTGCTTaGAGCTATTCGGCTGAGAAG +
Preference number: 4 (lower is better)
Translates to: PGTWEKQTPQQCPSGQWGTGQFA*SYSAEK
Trigger: CTTCTCAGCCGAATAGCTCCAAGCAAACTGTCCTGT...GCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTACCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CCA 90 bp CGACACTCCAATCCTATAGATCACCACGTTGCTCCTCTGTCCCCAGCACCCCTTCCATTGGCAGTACACTaGCGTCCATTCCCTGAGAAC +
Preference number: 4 (lower is better)
Translates to: RHSNPIDHHVAPLSPAPLPLAVH*RPFPEN
Trigger: GTTCTCAGGGAATGGACGCCAGTGTACTGCCAATGG...AAGGGGTGCTGGGGACAGAGGAGCAACGTGGTGATCTATAGGATTGGAGTGTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR CCA 90 bp GAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTGCTGTGTCAACCAATCTaGCTGATTGTAGTGCTCAGA +
Preference number: 4 (lower is better)
Translates to: EKQTPQQCPSGQWGRAGLLCQPI*LIVVLR
Trigger: TCTGAGCACTACAATCAGCCAGATTGGTTGACACAG...CAGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CCA 90 bp GCGCCGAGGGGCCTGTCAGTCTTTGGGAGTTCGGGCAAACTAGGGATGCAGGACGCAACAGCGAAGCGATaGACTTCATGGAGTTTAATA +
Preference number: 4 (lower is better)
Translates to: APRGLSVFGSSGKLGMQDATAKR*TSWSLI
Trigger: TATTAAACTCCATGAAGTCCATCGCTTCGCTGTTGC...GTCCTGCATCCCTAGTTTGCCCGAACTCCCAAAGACTGACAGGCCCCTCGGCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR CCA 90 bp GGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTAGGCTCTCTTTTCTaGCAATCTTTTTCCTCTCCT +
Preference number: 4 (lower is better)
Translates to: GGPGALVHGRSRLHSSAHLGSLF*QSFSSP
Trigger: AGGAGAGGAAAAAGATTGCCAGAAAAGAGAGCCTAG...ATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTACCAGGGCACCAGGCCCACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CCA 90 bp ACCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGCTAGGCTCTCTTTTCTaGCAATCTTTTTCCTCTCCT +
Preference number: 4 (lower is better)
Translates to: TFNFPLHPAAMPSVGWAWLGSLF*QSFSSP
Trigger: AGGAGAGGAAAAAGATTGCCAGAAAAGAGAGCCTAG...CCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CCA 90 bp CCTGGTACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCCAGAAGGCCCCTTTGTaGAGGAAAGCTCCAAAAGTT +
Preference number: 4 (lower is better)
Translates to: PGTWEKQTPQQCPSGQWGQKAPL*RKAPKV
Trigger: AACTTTTGGAGCTTTCCTCCACAAAGGGGCCTTCTG...GCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTACCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CCA 90 bp TTTCAAGGCCTTAGCCACAAACGCCTTCCGACTAACCAGCTTGGTGCCGTAGCTGCCACGAAGACGCACTaGACCACGTGCTTAAGTCCT +
Preference number: 4 (lower is better)
Translates to: FQGLSHKRLPTNQLGAVAATKTH*TTCLSP
Trigger: AGGACTTAAGCACGTGGTCCAGTGCGTCTTCGTGGC...AGCTACGGCACCAAGCTGGTTAGTCGGAAGGCGTTTGTGGCTAAGGCCTTGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CCA 90 bp GCTCCGCAGATGAGCCACGGCCCCGCTTCCACCTTCCGGAGGAGTGCTTTGCTTGGTTGTTATCTCTCATaGCAACTTTCCCAAACATCT +
Preference number: 4 (lower is better)
Translates to: APQMSHGPASTFRRSALLGCYLS*QLSQTS
Trigger: AGATGTTTGGGAAAGTTGCCATGAGAGATAACAACC...AAGCAAAGCACTCCTCCGGAAGGTGGAAGCGGGGCCGTGGCTCATCTGCGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CCA 90 bp GAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTGGCCTGGGGAAACGTCTaGAAGTTATTGTTCCTATTG +
Preference number: 4 (lower is better)
Translates to: EKQTPQQCPSGQWGRAGLAWGNV*KLLFLL
Trigger: CAATAGGAACAATAACTTCCAGACGTTTCCCCAGGC...CAGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CCA 90 bp AGCGCCGAGGGGCCTGTCAGTCTTTGGGAGTTCGGGCAAACTAGGGATGCAGGAGCCTGGGGAAACGTCTaGAAGTTATTGTTCCTATTG +
Preference number: 4 (lower is better)
Translates to: SAEGPVSLWEFGQTRDAGAWGNV*KLLFLL
Trigger: CAATAGGAACAATAACTTCCAGACGTTTCCCCAGGC...TCCTGCATCCCTAGTTTGCCCGAACTCCCAAAGACTGACAGGCCCCTCGGCGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CCA 90 bp AGCCACAAACGCCTTCCGACTAACCAGCTTGGTGCCGTAGCTCAGGCAGAAAATGTCACAGAGCTTCCCTaGGAGACAGGCCAGCATGAT +
Preference number: 4 (lower is better)
Translates to: SHKRLPTNQLGAVAQAENVTELP*ETGQHD
Trigger: ATCATGCTGGCCTGTCTCCCAGGGAAGCTCTGTGAC...ATTTTCTGCCTGAGCTACGGCACCAAGCTGGTTAGTCGGAAGGCGTTTGTGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000636938.1
ENST00000638120.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CCA 90 bp TCCTGTGGACACGTTAAGATGGAACCTGAGGTGTTGCCTGGATTGGTTTTGGCAAACCCCAGGGGAGGCTaGATGCGTCGAAGCAGAGTG +
Preference number: 4 (lower is better)
Translates to: SCGHVKMEPEVLPGLVLANPRGG*MRRSRV
Trigger: CACTCTGCTTCGACGCATCCAGCCTCCCCTGGGGTT...TGCCAAAACCAATCCAGGCAACACCTCAGGTTCCATCTTAACGTGTCCACAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CCA 90 bp CACCAGTCCCCAGAGGACAAGAGCAGCTATATCTCATCCACCTATGCATTTCTGGCAGGGGACGGTGGGTaGTATTGGTCTGCTGAAGGG +
Preference number: 4 (lower is better)
Translates to: HQSPEDKSSYISSTYAFLAGDGG*YWSAEG
Trigger: CCCTTCAGCAGACCAATACCACCCACCGTCCCCTGC...CAGAAATGCATAGGTGGATGAGATATAGCTGCTCTTGTCCTCTGGGGACTGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR CCA 90 bp TTCTTAAGCAGCACCACCAGTCCCCAGAGGACAAGAGCAGCTATATCTCATCCAGCAGGGGACGGTGGGTaGTATTGGTCTGCTGAAGGG +
Preference number: 4 (lower is better)
Translates to: FLSSTTSPQRTRAAISHPAGDGG*YWSAEG
Trigger: CCCTTCAGCAGACCAATACCACCCACCGTCCCCTGC...TGGATGAGATATAGCTGCTCTTGTCCTCTGGGGACTGGTGGTGCTGCTTAAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR CCA 90 bp GGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTTGGCATTTGTTGAGGTaGGAACTTGCTTTCCTATGG +
Preference number: 4 (lower is better)
Translates to: GEADSTAVPIWTMGQGRSWHLLR*ELAFLW
Trigger: CCATAGGAAAGCAAGTTCCCACCTCAACAAATGCCA...AGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CCA 90 bp CGTATTTCAGAACAGCTAAACAGGAACCAGGACGCAGTGTATTTGGGGGAAAGGAGGCTGCCGTTCACCTaGTCCAGGGCCTCTGACTGC +
Preference number: 4 (lower is better)
Translates to: RISEQLNRNQDAVYLGERRLPFT*SRASDC
Trigger: GCAGTCAGAGGCCCTGGACCAGGTGAACGGCAGCCT...CCTTTCCCCCAAATACACTGCGTCCTGGTTCCTGTTTAGCTGTTCTGAAATACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CCA 90 bp CCTCCTCACCCATCCTCTGTGAGAGGGCGGGGCCTGCTGTTTCCTGCAGCTGGGTTACTTACCAGAGGGTaGTTCAAGTCAAACAAACAA +
Preference number: 4 (lower is better)
Translates to: PPHPSSVRGRGLLFPAAGLLTRG*FKSNKQ
Trigger: TTGTTTGTTTGACTTGAACCACCCTCTGGTAAGTAA...CCCAGCTGCAGGAAACAGCAGGCCCCGCCCTCTCACAGAGGATGGGTGAGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR CCA 90 bp CTTAAGCAGCACCACCAGTCCCCAGAGGACAAGAGCAGCTATATCTCATCCACCGGCAGAGCAGCCAGCTaGACCTGCTCTGTAATTCAC +
Preference number: 4 (lower is better)
Translates to: LKQHHQSPEDKSSYISSTGRAAS*TCSVIH
Trigger: GTGAATTACAGAGCAGGTCCAGCTGGCTGCTCTGCC...GGTGGATGAGATATAGCTGCTCTTGTCCTCTGGGGACTGGTGGTGCTGCTTAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR CCA 90 bp AGCGCCGAGGGGCCTGTCAGTCTTTGGGAGTTCGGGCAAACTAGGGATGCAGGATGCAGGACTTTGGAATaGAGTCAGATACCCACCTTA +
Preference number: 4 (lower is better)
Translates to: SAEGPVSLWEFGQTRDAGCRTLE*SQIPTL
Trigger: TAAGGTGGGTATCTGACTCCATTCCAAAGTCCTGCA...TCCTGCATCCCTAGTTTGCCCGAACTCCCAAAGACTGACAGGCCCCTCGGCGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CCA 90 bp GAGCTTCCTGGCCTGTCCACTTCTCACTGTATTCTGGACTGGGTCTCTGCAGAGACGCTCAGGAGGTCATaGCGGACTGGCATACAAAAG +
Preference number: 4 (lower is better)
Translates to: ELPGLSTSHCILDWVSAETLRRS*RTGIQK
Trigger: CTTTTGTATGCCAGTCCGCCATGACCTCCTGAGCGT...CTCTGCAGAGACCCAGTCCAGAATACAGTGAGAAGTGGACAGGCCAGGAAGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR TCA 90 bp CCAAGGGGCAGAGCAGCCAGCTGGACCTGCTCTGTAATTCACTTACTTACTTACTCCAGATTTGCCGCTTaGGTGGTTCCCGCCTTCTGT +
Preference number: 4 (lower is better)
Translates to: PRGRAASWTCSVIHLLTYSRFAA*VVPAFC
Trigger: ACAGAAGGCGGGAACCACTCAAGCGGCAAATCTGGA...GTAAGTAAGTAAGTGAATTACAGAGCAGGTCCAGCTGGCTGCTCTGCCCCTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR TCA 90 bp GTGTATCTGAGCTTCCTGGCCTGTCCACTTCTCACTGTATTCTGGACTGGGTCTCCAGCATCTCGCAGGTaGACAGAGCCAAGAGGACTT +
Preference number: 4 (lower is better)
Translates to: VYLSFLACPLLTVFWTGSPASRR*TEPRGL
Trigger: AAGTCCTCTTGGCTCTGTTCACCTGCGAGATGCTGG...AGACCCAGTCCAGAATACAGTGAGAAGTGGACAGGCCAGGAAGCTCAGATACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR TCA 90 bp TTTCAAGGCCTTAGCCACAAACGCCTTCCGACTAACCAGCTTGGTGCCGTAGCTTCCCCAGGGGAGACATaGTTTCCAGTTCCACCAAGA +
Preference number: 4 (lower is better)
Translates to: FQGLSHKRLPTNQLGAVASPGET*FPVPPR
Trigger: TCTTGGTGGAACTGGAAATCATGTCTCCCCTGGGGA...AGCTACGGCACCAAGCTGGTTAGTCGGAAGGCGTTTGTGGCTAAGGCCTTGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR TCA 90 bp CAGTCCCCAGAGGACAAGAGCAGCTATATCTCATCCACCTATGCATTTCTGCACGCAGACGATCATTCCTaGAGAGGATGGGCCCCCGTA +
Preference number: 4 (lower is better)
Translates to: QSPEDKSSYISSTYAFLHADDHS*RGWAPV
Trigger: TACGGGGGCCCATCCTCTTCAGGAATGATCGTCTGC...GTGCAGAAATGCATAGGTGGATGAGATATAGCTGCTCTTGTCCTCTGGGGACTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR TCA 90 bp CGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCATTTTCTCCTTGTTCCTaGAATGTAACGATGACAAAG +
Preference number: 4 (lower is better)
Translates to: RRHAFSWVGLVPWYMGEAFSPCS*NVTMTK
Trigger: CTTTGTCATCGTTACATTTCAGGAACAAGGAGAAAA...TGCTTCTCCCATGTACCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR TCA 90 bp CCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTAAAGACGGAAAAAGGTaGTGGAGATTCTATTGCTCT +
Preference number: 4 (lower is better)
Translates to: PLTFPCTPPPCLQLGGPGKDGKR*WRFYCS
Trigger: AGAGCAATAGAATCTCCATCACCTTTTTCCGTCTTT...ACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR TCA 90 bp ACCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGAAAGACGGAAAAAGGTaGTGGAGATTCTATTGCTCT +
Preference number: 4 (lower is better)
Translates to: TFNFPLHPAAMPSVGWAWKDGKR*WRFYCS
Trigger: AGAGCAATAGAATCTCCATCACCTTTTTCCGTCTTT...CCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR TCA 90 bp ATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCAGACTCCAAGAAAACCTTATTTATaGGGTCCCATTGCCCTCGCA +
Preference number: 4 (lower is better)
Translates to: MPSVGWAWCPGTWEKQTPRKPYL*GPIALA
Trigger: TGCGAGGGCAATGGGACCTCATAAATAAGGTTTTCT...TGGAGTCTGCTTCTCCCATGTACCAGGGCACCAGGCCCACCCAACTGAAGGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR TCA 90 bp GAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTGCCAGAGGATTTTCGCTaGATAAATGAGAATTGGCTC +
Preference number: 4 (lower is better)
Translates to: EKQTPQQCPSGQWGRAGLPEDFR*INENWL
Trigger: GAGCCAATTCTCATTTATTCAGCGAAAATCCTCTGG...CAGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR TCA 90 bp GGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTTATCATCTATCTTTTTaGTTGCAGGGAATCCCTGCC +
Preference number: 4 (lower is better)
Translates to: GEADSTAVPIWTMGQGRSYHLSF*LQGIPA
Trigger: GGCAGGGATTCCCTGCAATCAAAAAGATAGATGATA...AGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR TCA 90 bp ATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCAGACTCCAGCTGAGTTTGGATTTTaGGATGGCTTGACAGAGACT +
Preference number: 4 (lower is better)
Translates to: MPSVGWAWCPGTWEKQTPAEFGF*DGLTET
Trigger: AGTCTCTGTCAAGCCATCTCAAAATCCAAACTCAGC...TGGAGTCTGCTTCTCCCATGTACCAGGGCACCAGGCCCACCCAACTGAAGGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350061.11
ENST00000422281.7
CDS-3UTR TCA 90 bp ACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGCTGAGTTTGGATTTTaGGATGGCTTGACAGAGACT +
Preference number: 4 (lower is better)
Translates to: TWEKQTPQQCPSGQWGRAAEFGF*DGLTET
Trigger: AGTCTCTGTCAAGCCATCTCAAAATCCAAACTCAGC...TGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350061.11
ENST00000422281.7
CDS-3UTR TCA 90 bp GCTCCGCAGATGAGCCACGGCCCCGCTTCCACCTTCCGGAGGAGTGCTTTGCTTTTCCTGCATTTCTTCTaGAATGCTGTTTCAGTAGAA +
Preference number: 4 (lower is better)
Translates to: APQMSHGPASTFRRSALLFLHFF*NAVSVE
Trigger: TTCTACTGAAACAGCATTTCAGAAGAAATGCAGGAA...AAGCAAAGCACTCCTCCGGAAGGTGGAAGCGGGGCCGTGGCTCATCTGCGGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR TCA 90 bp TCCTGTGGACACGTTAAGATGGAACCTGAGGTGTTGCCTGGATTGGTTTTGGCAGAAAAAGAACCACCGTaGGCAACGTCCGCGACAGGC +
Preference number: 4 (lower is better)
Translates to: SCGHVKMEPEVLPGLVLAEKEPP*ATSATG
Trigger: GCCTGTCGCGGACGTTGCTCACGGTGGTTCTTTTTC...TGCCAAAACCAATCCAGGCAACACCTCAGGTTCCATCTTAACGTGTCCACAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR TCA 90 bp GGTTCCCTGACTCCCAGTGTCCTTGAAACTAGACCACACTGCTTCCAAAGAGGCTCCCCAGACTGGCTCTaGGCACGAATTAAAGACGGA +
Preference number: 4 (lower is better)
Translates to: GSLTPSVLETRPHCFQRGSPDWL*ARIKDG
Trigger: TCCGTCTTTAATTCGTGCTCAGAGCCAGTCTGGGGA...GCCTCTTTGGAAGCAGTGTGGTCTAGTTTCAAGGACACTGGGAGTCAGGGAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000645528.2
CDS-3UTR GCA 90 bp AACCGTAACTATGGATACCCAAGGGGCAGAGCAGCCAGCTGGACCTGCTCTGTAAAGTCTGGTGCCTCTTaGATAGTTTGCCTCGTTCGC +
Preference number: 4 (lower is better)
Translates to: NRNYGYPRGRAASWTCSVKSGAS*IVCLVR
Trigger: GCGAACGAGGCAAACTATGCAAGAGGCACCAGACTT...TACAGAGCAGGTCCAGCTGGCTGCTCTGCCCCTTGGGTATCCATAGTTACGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR GCA 90 bp ACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAAAAGAGGAAGTCTGGTaGCTCTTGCATAGTTTGCCT +
Preference number: 4 (lower is better)
Translates to: TWEKQTPQQCPSGQWGRAKEEVW*LLHSLP
Trigger: AGGCAAACTATGCAAGAGGCACCAGACTTCCTCTTT...TGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR GCA 90 bp AACCGTAACTATGGATACCCAAGGGGCAGAGCAGCCAGCTGGACCTGCTCTGTATCTAGCAGCATCGATTaGAGCTTGCCAAGACAGGAC +
Preference number: 4 (lower is better)
Translates to: NRNYGYPRGRAASWTCSVSSSID*SLPRQD
Trigger: GTCCTGTCTTGGCAAGCTGCAATCGATGCTGCTAGA...TACAGAGCAGGTCCAGCTGGCTGCTCTGCCCCTTGGGTATCCATAGTTACGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR GCA 90 bp CTTAAGCAGCACCACCAGTCCCCAGAGGACAAGAGCAGCTATATCTCATCCACCTCCTACAGGTGGGGGTaGAGAGGTGCTCATAGTTTG +
Preference number: 4 (lower is better)
Translates to: LKQHHQSPEDKSSYISSTSYRWG*RGAHSL
Trigger: CAAACTATGAGCACCTCTGCACCCCCACCTGTAGGA...GGTGGATGAGATATAGCTGCTCTTGTCCTCTGGGGACTGGTGGTGCTGCTTAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR GCA 90 bp AGCCACAAACGCCTTCCGACTAACCAGCTTGGTGCCGTAGCTCAGGCAGAAAATCACTCCTACATTCCGTaGCATTGGCAGTACACTGGC +
Preference number: 4 (lower is better)
Translates to: SHKRLPTNQLGAVAQAENHSYIP*HWQYTG
Trigger: GCCAGTGTACTGCCAATGGCACGGAATGTAGGAGTG...ATTTTCTGCCTGAGCTACGGCACCAAGCTGGTTAGTCGGAAGGCGTTTGTGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR GCA 90 bp TCATCACCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGAAGAGAGACGAAATATaGTTGGAGGCCCAAGCTGTA +
Preference number: 4 (lower is better)
Translates to: SSPLTFPCTPPPCLQLGGKRDEI*LEAQAV
Trigger: TACAGCTTGGGCCTCCAAGCATATTTCGTCTCTCTT...CCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGGTGATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR GCA 90 bp TACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAAGAGAGACGAAATATaGTTGGAGGCCCAAGCTGTA +
Preference number: 4 (lower is better)
Translates to: YMGEADSTAVPIWTMGQGKRDEI*LEAQAV
Trigger: TACAGCTTGGGCCTCCAAGCATATTTCGTCTCTCTT...GCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR GCA 90 bp AACCGTAACTATGGATACCCAAGGGGCAGAGCAGCCAGCTGGACCTGCTCTGTATTGCCGCCAAACAGCTaGATCCCAAGCAAGGAAAAG +
Preference number: 4 (lower is better)
Translates to: NRNYGYPRGRAASWTCSVLPPNS*IPSKEK
Trigger: CTTTTCCTTGCTTGGGATGCAGCTGTTTGGCGGCAA...TACAGAGCAGGTCCAGCTGGCTGCTCTGCCCCTTGGGTATCCATAGTTACGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR GCA 90 bp CCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCCTGGTGTGCTCCGCTTGGTTTaGGTTTCATCAAAATTAAAC +
Preference number: 4 (lower is better)
Translates to: PLTFPCTPPPCLQLGGPGVLRLV*VSSKLN
Trigger: GTTTAATTTTGATGAAACGCAAACCAAGCGGAGCAC...ACCAGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR GCA 90 bp TCCTGTGGACACGTTAAGATGGAACCTGAGGTGTTGCCTGGATTGGTTTTGGCACCAGGCCTCACCTGTTaGACACCTGAAGAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: SCGHVKMEPEVLPGLVLAPGLTC*TPEEQQ
Trigger: CTGCTGCTCTTCAGGTGTGCAACAGGTGAGGCCTGG...TGCCAAAACCAATCCAGGCAACACCTCAGGTTCCATCTTAACGTGTCCACAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR GCA 90 bp AGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTGGAGACAATGGCAAAGTTaGTCCCACATGTATACTCCT +
Preference number: 4 (lower is better)
Translates to: RSRLHSSAHLDNGAGQVWRQWQS*SHMYTP
Trigger: AGGAGTATACATGTGGGAGCAACTTTGCCATTGTCT...CCAGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR GCA 90 bp ATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGGTTGAGGTGGGAACTTaGTTTCCTATGGAATTATGG +
Preference number: 4 (lower is better)
Translates to: MGEADSTAVPIWTMGQGRVEVGT*FPMELW
Trigger: CCATAATTCCATAGGAAAGCAAGTTCCCACCTCAAC...CCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR GCA 90 bp GGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTTTCTGCCTGGGTATCTaGTGTAGTAGCCATAGTTTT +
Preference number: 4 (lower is better)
Translates to: GEADSTAVPIWTMGQGRSFCLGI*CSSHSF
Trigger: AAAACTATGGCTACTACAGCAGATACCCAGGCAGAA...AGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR GCA 90 bp CGACACTCCAATCCTATAGATCACCACGTTGCTCCTCTGTCCCCAGCACCCCTTGCCATGATCTGTTGCTaGATTAGATGCAGAGGCAGG +
Preference number: 4 (lower is better)
Translates to: RHSNPIDHHVAPLSPAPLAMICC*IRCRGR
Trigger: CCTGCCTCTGCATCTAATGCAGCAACAGATCATGGC...AAGGGGTGCTGGGGACAGAGGAGCAACGTGGTGATCTATAGGATTGGAGTGTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR GCA 90 bp CGTATTTCAGAACAGCTAAACAGGAACCAGGACGCAGTGTATTTGGGGGAAAGGGTTGGGTGGGCCTGGTaGCCTGGTACATGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: RISEQLNRNQDAVYLGERVGWAW*PGTWEK
Trigger: CTTCTCCCATGTACCAGGGCACCAGGCCCACCCAAC...CCTTTCCCCCAAATACACTGCGTCCTGGTTCCTGTTTAGCTGTTCTGAAATACG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR GCA 90 bp TCATCACCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGTATCTCATCCACCTATaGATTTCTGCACCAGCGATG +
Preference number: 4 (lower is better)
Translates to: SSPLTFPCTPPPCLQLGGYLIHL*ISAPAM
Trigger: CATCGCTGGTGCAGAAATGCATAGGTGGATGAGATA...CCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGGTGATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR GCA 90 bp GAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTGATCTATCTTTTTGATTaGAGGGAATCCCTGCCAAGG +
Preference number: 4 (lower is better)
Translates to: EKQTPQQCPSGQWGRAGLIYLFD*RESLPR
Trigger: CCTTGGCAGGGATTCCCTGCAATCAAAAAGATAGAT...CAGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR GCA 90 bp GGAGGTCATGGCGGACTGGCATACAAAAGGAACTCTGTCAGCTCAGCGCCGAGGTGTGAAAATGCAACCTaGAGGGTTACCTCTGTTGAC +
Preference number: 4 (lower is better)
Translates to: GGHGGLAYKRNSVSSAPRCENAT*RVTSVD
Trigger: GTCAACAGAGGTAACCCTGCAGGTTGCATTTTCACA...CCTCGGCGCTGAGCTGACAGAGTTCCTTTTGTATGCCAGTCCGCCATGACCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636938.1
CDS-3UTR GCA 90 bp TCCACCTTCCGGAGGAGTGCTTTGCTTGGAAGGGGTCTCCCTGGGGCCTTGGGTCTTCTGCATTACCTCTaGACTATGGCTACTTTGAAT +
Preference number: 4 (lower is better)
Translates to: STFRRSALLGRGLPGALGLLHYL*TMATLN
Trigger: ATTCAAAGTAGCCATAGTGCAGAGGTAATGCAGAAG...ACCCAAGGCCCCAGGGAGACCCCTTCCAAGCAAAGCACTCCTCCGGAAGGTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636938.1
CDS-3UTR CCA 90 bp GTTAAGCTTTGTACGTTCCCTTTCACGAAAAAGAACCACCGTGAGCAACGTCCGTTTGCCTCGTTCGCGTaGTCCGCTTGCTGCTGCCGT +
Preference number: 4 (lower is better)
Translates to: VKLCTFPFTKKNHREQRPFASFA*SACCCR
Trigger: ACGGCAGCAGCAAGCGGACCACGCGAACGAGGCAAA...CGGACGTTGCTCACGGTGGTTCTTTTTCGTGAAAGGGAACGTACAAAGCTTAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR CCA 90 bp GGAGGTCATGGCGGACTGGCATACAAAAGGAACTCTGTCAGCTCAGCGCCGAGGCAGAAAGAGGAAGTCTaGTGCCTCTTGCATAGTTTG +
Preference number: 4 (lower is better)
Translates to: GGHGGLAYKRNSVSSAPRQKEEV*CLLHSL
Trigger: CAAACTATGCAAGAGGCACCAGACTTCCTCTTTCTG...CCTCGGCGCTGAGCTGACAGAGTTCCTTTTGTATGCCAGTCCGCCATGACCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR CCA 90 bp GAGCTTCCTGGCCTGTCCACTTCTCACTGTATTCTGGACTGGGTCTCTGCAGAGGATTTGCCGCTTGAGTaGTTCCCGCCTTCTGTTTCT +
Preference number: 4 (lower is better)
Translates to: ELPGLSTSHCILDWVSAEDLPLE*FPPSVS
Trigger: AGAAACAGAAGGCGGGAACCACTCAAGCGGCAAATC...CTCTGCAGAGACCCAGTCCAGAATACAGTGAGAAGTGGACAGGCCAGGAAGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR CCA 90 bp ATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCAGACTCCACTGTGTCAACCAATCTaGCTGATTGTAGTGCTCAGA +
Preference number: 4 (lower is better)
Translates to: MPSVGWAWCPGTWEKQTPLCQPI*LIVVLR
Trigger: TCTGAGCACTACAATCAGCCAGATTGGTTGACACAG...TGGAGTCTGCTTCTCCCATGTACCAGGGCACCAGGCCCACCCAACTGAAGGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CCA 90 bp ATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCAGACTCCAGAGACGAAATATGCTTaGAGGCCCAAGCTGTACATT +
Preference number: 4 (lower is better)
Translates to: MPSVGWAWCPGTWEKQTPETKYA*RPKLYI
Trigger: AATGTACAGCTTGGGCCTCCAAGCATATTTCGTCTC...TGGAGTCTGCTTCTCCCATGTACCAGGGCACCAGGCCCACCCAACTGAAGGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CCA 90 bp GAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTGCAAAGGTGCTCCGCTTaGTTTGCGTTTCATCAAAAT +
Preference number: 4 (lower is better)
Translates to: EKQTPQQCPSGQWGRAGLQRCSA*FAFHQN
Trigger: ATTTTGATGAAACGCAAACCAAGCGGAGCACCTTTG...CAGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CCA 90 bp GGAGGTCATGGCGGACTGGCATACAAAAGGAACTCTGTCAGCTCAGCGCCGAGGTCTTCACAACGGAGATaGCACTGGATTGAATCCCAA +
Preference number: 4 (lower is better)
Translates to: GGHGGLAYKRNSVSSAPRSSQRR*HWIESQ
Trigger: TTGGGATTCAATCCAGTGCCATCTCCGTTGTGAAGA...CCTCGGCGCTGAGCTGACAGAGTTCCTTTTGTATGCCAGTCCGCCATGACCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CCA 90 bp GAGCTTCCTGGCCTGTCCACTTCTCACTGTATTCTGGACTGGGTCTCTGCAGAGTTCCCCTTGAACAACTaGACCCCGATACAGGCAAAC +
Preference number: 4 (lower is better)
Translates to: ELPGLSTSHCILDWVSAEFPLNN*TPIQAN
Trigger: GTTTGCCTGTATCGGGGTCCAGTTGTTCAAGGGGAA...CTCTGCAGAGACCCAGTCCAGAATACAGTGAGAAGTGGACAGGCCAGGAAGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CCA 90 bp CCTGGTACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCCTTCAGGGTTACTTTTaGCTTCATCCGTACAGCGAT +
Preference number: 4 (lower is better)
Translates to: PGTWEKQTPQQCPSGQWGLQGYF*LHPYSD
Trigger: ATCGCTGTACGGATGAAGCCAAAAGTAACCCTGAAG...GCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTACCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CCA 90 bp ACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGCCTGGGGAAACGTCTaGAAGTTATTGTTCCTATTG +
Preference number: 4 (lower is better)
Translates to: TWEKQTPQQCPSGQWGRAAWGNV*KLLFLL
Trigger: CAATAGGAACAATAACTTCCAGACGTTTCCCCAGGC...TGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CCA 90 bp GGCCTTAGCCACAAACGCCTTCCGACTAACCAGCTTGGTGCCGTAGCTCAGGCAGCCTGGGGAAACGTCTaGAAGTTATTGTTCCTATTG +
Preference number: 4 (lower is better)
Translates to: GLSHKRLPTNQLGAVAQAAWGNV*KLLFLL
Trigger: CAATAGGAACAATAACTTCCAGACGTTTCCCCAGGC...TGCCTGAGCTACGGCACCAAGCTGGTTAGTCGGAAGGCGTTTGTGGCTAAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000636938.1
ENST00000638120.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CCA 90 bp GTTAAGCTTTGTACGTTCCCTTTCACGAAAAAGAACCACCGTGAGCAACGTCCGAACCCCAGGGGAGGCTaGATGCGTCGAAGCAGAGTG +
Preference number: 4 (lower is better)
Translates to: VKLCTFPFTKKNHREQRPNPRGG*MRRSRV
Trigger: CACTCTGCTTCGACGCATCCAGCCTCCCCTGGGGTT...CGGACGTTGCTCACGGTGGTTCTTTTTCGTGAAAGGGAACGTACAAAGCTTAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CCA 90 bp TACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCGCTGGAGGGACAACTTaGTCAAGTAATTTCATGCTG +
Preference number: 4 (lower is better)
Translates to: YMGEADSTAVPIWTMGQGAGGTT*SSNFML
Trigger: CAGCATGAAATTACTTGACCAAGTTGTCCCTCCAGC...GCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CCA 90 bp GGCCTTAGCCACAAACGCCTTCCGACTAACCAGCTTGGTGCCGTAGCTCAGGCAGCTGGAGGGACAACTTaGTCAAGTAATTTCATGCTG +
Preference number: 4 (lower is better)
Translates to: GLSHKRLPTNQLGAVAQAAGGTT*SSNFML
Trigger: CAGCATGAAATTACTTGACCAAGTTGTCCCTCCAGC...TGCCTGAGCTACGGCACCAAGCTGGTTAGTCGGAAGGCGTTTGTGGCTAAGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636938.1
ENST00000638120.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CCA 90 bp ATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCAGACTCCATGGCATTTGTTGAGGTaGGAACTTGCTTTCCTATGG +
Preference number: 4 (lower is better)
Translates to: MPSVGWAWCPGTWEKQTPWHLLR*ELAFLW
Trigger: CCATAGGAAAGCAAGTTCCCACCTCAACAAATGCCA...TGGAGTCTGCTTCTCCCATGTACCAGGGCACCAGGCCCACCCAACTGAAGGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CCA 90 bp CACCAGTCCCCAGAGGACAAGAGCAGCTATATCTCATCCACCTATGCATTTCTGTTTGCCTGCTCCAGGTaGGCGAGCTGTCATCCTCGT +
Preference number: 4 (lower is better)
Translates to: HQSPEDKSSYISSTYAFLFACSR*ASCHPR
Trigger: ACGAGGATGACAGCTCGCCCACCTGGAGCAGGCAAA...CAGAAATGCATAGGTGGATGAGATATAGCTGCTCTTGTCCTCTGGGGACTGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR CCA 90 bp TCATCACCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCTCGGTGAGTACTTCTaGGCTTTACTTGAATCTAGG +
Preference number: 4 (lower is better)
Translates to: SSPLTFPCTPPPCLQLGGLGEYF*ALLESR
Trigger: CCTAGATTCAAGTAAAGCCCAGAAGTACTCACCGAG...CCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGGTGATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CCA 90 bp CAGACACTTAGGGTCCTGGTCTGGCAATTTTGGCCTGATGTGATGCCACAAGACGACAGTCAGGCTGGCTaGTGTGAAAGTCCGGTAGGA +
Preference number: 4 (lower is better)
Translates to: QTLRVLVWQFWPDVMPQDDSQAG*CESPVG
Trigger: TCCTACCGGACTTTCACACCAGCCAGCCTGACTGTC...GTCTTGTGGCATCACATCAGGCCAAAATTGCCAGACCAGGACCCTAAGTGTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR CCA 90 bp CGTATTTCAGAACAGCTAAACAGGAACCAGGACGCAGTGTATTTGGGGGAAAGGTGTTCCGGAAGCTGCTaGGGACAGTCAGGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: RISEQLNRNQDAVYLGERCSGSC*GQSGWL
Trigger: CAGCCAGCCTGACTGTCCCCAGCAGCTTCCGGAACA...CCTTTCCCCCAAATACACTGCGTCCTGGTTCCTGTTTAGCTGTTCTGAAATACG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR CCA 90 bp CAGTCCCCAGAGGACAAGAGCAGCTATATCTCATCCACCTATGCATTTCTGCACCCAGGCTCAACCGCTTaGGACCTGTTCCTACCAGGT +
Preference number: 4 (lower is better)
Translates to: QSPEDKSSYISSTYAFLHPGSTA*DLFLPG
Trigger: ACCTGGTAGGAACAGGTCCCAAGCGGTTGAGCCTGG...GTGCAGAAATGCATAGGTGGATGAGATATAGCTGCTCTTGTCCTCTGGGGACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR CCA 90 bp ATACCCAAGGGGCAGAGCAGCCAGCTGGACCTGCTCTGTAATTCACTTACTTACTGGTGCCCTGGTACATaGGAGAAGCAGACTCCACAG +
Preference number: 4 (lower is better)
Translates to: IPKGQSSQLDLLCNSLTYWCPGT*EKQTPQ
Trigger: CTGTGGAGTCTGCTTCTCCCATGTACCAGGGCACCA...GTAAGTAAGTGAATTACAGAGCAGGTCCAGCTGGCTGCTCTGCCCCTTGGGTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR CCA 90 bp CAGACACTTAGGGTCCTGGTCTGGCAATTTTGGCCTGATGTGATGCCACAAGACATTTCAGAGCTGCCCTaGCACAGTACCTGCCCTGTC +
Preference number: 4 (lower is better)
Translates to: QTLRVLVWQFWPDVMPQDISELP*HSTCPV
Trigger: GACAGGGCAGGTACTGTGCCAGGGCAGCTCTGAAAT...GTCTTGTGGCATCACATCAGGCCAAAATTGCCAGACCAGGACCCTAAGTGTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR CCA 90 bp AACCGTAACTATGGATACCCAAGGGGCAGAGCAGCCAGCTGGACCTGCTCTGTAAGACACTTAGGGTCCTaGTCTGGCAATTTTGGCCTG +
Preference number: 4 (lower is better)
Translates to: NRNYGYPRGRAASWTCSVRHLGS*SGNFGL
Trigger: CAGGCCAAAATTGCCAGACCAGGACCCTAAGTGTCT...TACAGAGCAGGTCCAGCTGGCTGCTCTGCCCCTTGGGTATCCATAGTTACGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR CCA 90 bp GAGCTTCCTGGCCTGTCCACTTCTCACTGTATTCTGGACTGGGTCTCTGCAGAGGTGGACACGTTAAGATaGAACCTGAGGTGTTGCCTG +
Preference number: 4 (lower is better)
Translates to: ELPGLSTSHCILDWVSAEVDTLR*NLRCCL
Trigger: CAGGCAACACCTCAGGTTCCATCTTAACGTGTCCAC...CTCTGCAGAGACCCAGTCCAGAATACAGTGAGAAGTGGACAGGCCAGGAAGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CCA 90 bp CCTTCCGGAGGAGTGCTTTGCTTGGAAGGGGTCTCCCTGGGGCCTTGGGTCTGCTATCGACCAACATCTTaGGCAAAAATCTGCTATTCT +
Preference number: 4 (lower is better)
Translates to: PSGGVLCLEGVSLGPWVCYRPTS*AKICYS
Trigger: AGAATAGCAGATTTTTGCCCAAGATGTTGGTCGATA...GCAGACCCAAGGCCCCAGGGAGACCCCTTCCAAGCAAAGCACTCCTCCGGAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000636938.1
CDS-3UTR TCA 90 bp GAAATGGCGCTCCCTGCGGCTGGTATTAGGTTACCATTGGCACCGAAGGAACCACTCTTGGCGTATTGCTaGCGTTTTCTTTGGGAGAGA +
Preference number: 4 (lower is better)
Translates to: EMALPAAGIRLPLAPKEPLLAYC*RFLWER
Trigger: TCTCTCCCAAAGAAAACGTCAGCAATACGCCAAGAG...TGGTTCCTTCGGTGCCAATGGTAACCTAATACCAGCCGCAGGGAGCGCCATTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR TCA 90 bp TACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCTTCGGATGGGGTTATTaGGTGATAAACAGAAAAGGG +
Preference number: 4 (lower is better)
Translates to: YMGEADSTAVPIWTMGQGFGWGY*VINRKG
Trigger: CCCTTTTCTGTTTATCACTCAATAACCCCATCCGAA...GCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR TCA 90 bp GACTTACTTACACACCGTATTTCAGAACAGCTAAACAGGAACCAGGACGCAGTGCTGGCGTCCATTCCCTaGGAACGCACATGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: DLLTHRISEQLNRNQDAVLASIP*ERTWSW
Trigger: CCAGCTCCATGTGCGTTCTCAGGGAATGGACGCCAG...CACTGCGTCCTGGTTCCTGTTTAGCTGTTCTGAAATACGGTGTGTAAGTAAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR TCA 90 bp CAGGACTTTGGAATGGAGTCAGATACCCACCTTAGGCAGGTCTGCTTAATCTTTCTGGCGTCCATTCCCTaGGAACGCACATGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: QDFGMESDTHLRQVCLIFLASIP*ERTWSW
Trigger: CCAGCTCCATGTGCGTTCTCAGGGAATGGACGCCAG...AAAGATTAAGCAGACCTGCCTAAGGTGGGTATCTGACTCCATTCCAAAGTCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR TCA 90 bp TTCTTAAGCAGCACCACCAGTCCCCAGAGGACAAGAGCAGCTATATCTCATCCATCTCGCCTTCACCGCTaGCGTTCTCTGTGTTCACAG +
Preference number: 4 (lower is better)
Translates to: FLSSTTSPQRTRAAISHPSRLHR*RSLCSQ
Trigger: CTGTGAACACAGAGAACGTCAGCGGTGAAGGCGAGA...TGGATGAGATATAGCTGCTCTTGTCCTCTGGGGACTGGTGGTGCTGCTTAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR TCA 90 bp CACTCTCTGGACTTTCTGGAGACACTAGCATTAAAACCAAAGCACTGGCCAAGGGATTTTGAGATGGCTTaGCCCCACCGCCGACACCCA +
Preference number: 4 (lower is better)
Translates to: HSLDFLETLALKPKHWPRDFEMA*PHRRHP
Trigger: TGGGTGTCGGCGGTGGGGTCAAGCCATCTCAAAATC...CCTTGGCCAGTGCTTTGGTTTTAATGCTAGTGTCTCCAGAAAGTCCAGAGAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000636627.1
CDS-3UTR TCA 90 bp ACTGGCGTCACATCACAGAAAACCTTATTTATGAGGTCCCATTGCCCTCGCAATCCAGCCAGTAAAACGTaGCAGACTTCACGGCGGCCC +
Preference number: 4 (lower is better)
Translates to: TGVTSQKTLFMRSHCPRNPASKT*QTSRRP
Trigger: GGGCCGCCGTGAAGTCTGTCACGTTTTACTGGCTGG...ATTGCGAGGGCAATGGGACCTCATAAATAAGGTTTTCTGTGATGTGACGCCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR TCA 90 bp GTGTATCTGAGCTTCCTGGCCTGTCCACTTCTCACTGTATTCTGGACTGGGTCTTCCCCAGGGGAGACATaGTTTCCAGTTCCACCAAGA +
Preference number: 4 (lower is better)
Translates to: VYLSFLACPLLTVFWTGSSPGET*FPVPPR
Trigger: TCTTGGTGGAACTGGAAATCATGTCTCCCCTGGGGA...AGACCCAGTCCAGAATACAGTGAGAAGTGGACAGGCCAGGAAGCTCAGATACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR TCA 90 bp CACTCTCTGGACTTTCTGGAGACACTAGCATTAAAACCAAAGCACTGGCCAAGGGGCCCCCGTAAGCCATaGTGCCATCGTACATCACAG +
Preference number: 4 (lower is better)
Translates to: HSLDFLETLALKPKHWPRGPRKP*CHRTSQ
Trigger: CTGTGATGTACGATGGCATCATGGCTTACGGGGGCC...CCTTGGCCAGTGCTTTGGTTTTAATGCTAGTGTCTCCAGAAAGTCCAGAGAGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000636627.1
CDS-3UTR TCA 90 bp GTTAAGCTTTGTACGTTCCCTTTCACGAAAAAGAACCACCGTGAGCAACGTCCGGCAGACGATCATTCCTaGAGAGGATGGGCCCCCGTA +
Preference number: 4 (lower is better)
Translates to: VKLCTFPFTKKNHREQRPADDHS*RGWAPV
Trigger: TACGGGGGCCCATCCTCTTCAGGAATGATCGTCTGC...CGGACGTTGCTCACGGTGGTTCTTTTTCGTGAAAGGGAACGTACAAAGCTTAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR TCA 90 bp TCCCTTTCACGAAAAAGAACCACCGTGAGCAACGTCCGCGACAGGCAGCCCTGGTGTTGGCTATCTGGTTaGCTTCTGGTTTGTTGTTCT +
Preference number: 4 (lower is better)
Translates to: SLSRKRTTVSNVRDRQPWCWLSG*LLVCCS
Trigger: AGAACAACAAACCAGAAGTCAACCAGATAGCCAACA...CCAGGGCTGCCTGTCGCGGACGTTGCTCACGGTGGTTCTTTTTCGTGAAAGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR TCA 90 bp TCCACCTTCCGGAGGAGTGCTTTGCTTGGAAGGGGTCTCCCTGGGGCCTTGGGTTTTTCTCCTTGTTCCTaGAATGTAACGATGACAAAG +
Preference number: 4 (lower is better)
Translates to: STFRRSALLGRGLPGALGFSPCS*NVTMTK
Trigger: CTTTGTCATCGTTACATTTCAGGAACAAGGAGAAAA...ACCCAAGGCCCCAGGGAGACCCCTTCCAAGCAAAGCACTCCTCCGGAAGGTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR TCA 90 bp GAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTGAAAGACGGAAAAAGGTaGTGGAGATTCTATTGCTCT +
Preference number: 4 (lower is better)
Translates to: EKQTPQQCPSGQWGRAGLKDGKR*WRFYCS
Trigger: AGAGCAATAGAATCTCCATCACCTTTTTCCGTCTTT...CAGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR TCA 90 bp ATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCAGACTCCAAATTCATCTAAATGGTaGGGCCCCAAAATAGACCAG +
Preference number: 4 (lower is better)
Translates to: MPSVGWAWCPGTWEKQTPNSSKW*GPKIDQ
Trigger: CTGGTCTATTTTGGGGCCTCACCATTTAGATGAATT...TGGAGTCTGCTTCTCCCATGTACCAGGGCACCAGGCCCACCCAACTGAAGGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR TCA 90 bp TCCCTTTCACGAAAAAGAACCACCGTGAGCAACGTCCGCGACAGGCAGCCCTGGAATTCATCTAAATGGTaGGGCCCCAAAATAGACCAG +
Preference number: 4 (lower is better)
Translates to: SLSRKRTTVSNVRDRQPWNSSKW*GPKIDQ
Trigger: CTGGTCTATTTTGGGGCCTCACCATTTAGATGAATT...CCAGGGCTGCCTGTCGCGGACGTTGCTCACGGTGGTTCTTTTTCGTGAAAGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR TCA 90 bp TGCAACCCATGGTGGATCCAAAGGTACAGTATCAAAATCATGGAACTCTTGCCCCACGACCGGGTCGAGTaGCTCGGTGAGTACTTCTGG +
Preference number: 4 (lower is better)
Translates to: CNPWWIQRYSIKIMELLPHDRVE*LGEYFW
Trigger: CCAGAAGTACTCACCGAGTCACTCGACCCGGTCGTG...GGGCAAGAGTTCCATGATTTTGATACTGTACCTTTGGATCCACCATGGGTTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR TCA 90 bp TTCTTAAGCAGCACCACCAGTCCCCAGAGGACAAGAGCAGCTATATCTCATCCATCAGGCTGGCTGGTGTaGAAGTCCGGTAGGAGATGT +
Preference number: 4 (lower is better)
Translates to: FLSSTTSPQRTRAAISHPSGWLV*KSGRRC
Trigger: ACATCTCCTACCGGACTTTCACACCAGCCAGCCTGA...TGGATGAGATATAGCTGCTCTTGTCCTCTGGGGACTGGTGGTGCTGCTTAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR TCA 90 bp CGTATTTCAGAACAGCTAAACAGGAACCAGGACGCAGTGTATTTGGGGGAAAGGCCATCTCGTCGATGGTaGGGTCACAGGCATCAGCGA +
Preference number: 4 (lower is better)
Translates to: RISEQLNRNQDAVYLGERPSRRW*GHRHQR
Trigger: TCGCTGATGCCTGTGACCTCACCATCGACGAGATGG...CCTTTCCCCCAAATACACTGCGTCCTGGTTCCTGTTTAGCTGTTCTGAAATACG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR TCA 90 bp TCTAATTATCCAAAAGTGGGTTTTCATCAGGACGTACAGTCAGAGTGTGAGTGCCTCACCCATCCTCTGTaGGAGGGCGGGGCCTGCTGT +
Preference number: 4 (lower is better)
Translates to: SNYPKVGFHQDVQSECECLTHPL*EGGACC
Trigger: ACAGCAGGCCCCGCCCTCTCACAGAGGATGGGTGAG...GCACTCACACTCTGACTGTACGTCCTGATGAAAACCCACTTTTGGATAATTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR TCA 90 bp AGACAGTTGCAACCCATGGTGGATCCAAAGGTACAGTATCAAAATCATGGAACTCTCACCCATCCTCTGTaGGAGGGCGGGGCCTGCTGT +
Preference number: 4 (lower is better)
Translates to: RQLQPMVDPKVQYQNHGTLTHPL*EGGACC
Trigger: ACAGCAGGCCCCGCCCTCTCACAGAGGATGGGTGAG...AGTTCCATGATTTTGATACTGTACCTTTGGATCCACCATGGGTTGCAACTGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR TCA 90 bp CCTGGTACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCCGTACAGTCAGAGTGTaGGTGCATTCTAATGAAAAC +
Preference number: 4 (lower is better)
Translates to: PGTWEKQTPQQCPSGQWGRTVRV*VHSNEN
Trigger: GTTTTCATTAGAATGCACTCACACTCTGACTGTACG...GCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTACCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR TCA 90 bp TCATCACCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGTATCATCTATCTTTTTaGTTGCAGGGAATCCCTGCC +
Preference number: 4 (lower is better)
Translates to: SSPLTFPCTPPPCLQLGGYHLSF*LQGIPA
Trigger: GGCAGGGATTCCCTGCAATCAAAAAGATAGATGATA...CCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGGTGATGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR TCA 90 bp GAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTGGTCATTTACAAACCTTaGAGTGTTTTTGCCTGGATC +
Preference number: 4 (lower is better)
Translates to: EKQTPQQCPSGQWGRAGLVIYKP*SVFAWI
Trigger: GATCCAGGCAAAAACACTTCAAGGTTTGTAAATGAC...CAGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR TCA 90 bp GAAATGGCGCTCCCTGCGGCTGGTATTAGGTTACCATTGGCACCGAAGGAACCAAATTTTGGCCTGATGTaGTGCCACAAGACCCAACAG +
Preference number: 4 (lower is better)
Translates to: EMALPAAGIRLPLAPKEPNFGLM*CHKTQQ
Trigger: CTGTTGGGTCTTGTGGCATCACATCAGGCCAAAATT...TGGTTCCTTCGGTGCCAATGGTAACCTAATACCAGCCGCAGGGAGCGCCATTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR TCA 90 bp TCATCACCTTTAACTTTCCCCTGCACCCCGCCGCCATGCCTTCAGTTGGGTGGGCTTCTCTCTTTCCTTTaGGAATTCTCCGCTCAATAC +
Preference number: 4 (lower is better)
Translates to: SSPLTFPCTPPPCLQLGGLLSFL*EFSAQY
Trigger: GTATTGAGCGGAGAATTCTCAAAGGAAAGAGAGAAG...CCCACCCAACTGAAGGCATGGCGGCGGGGTGCAGGGGAAAGTTAAAGGTGATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350061.11
ENST00000422281.7
CDS-3UTR TCA 90 bp AGCCACAAACGCCTTCCGACTAACCAGCTTGGTGCCGTAGCTCAGGCAGAAAATAGGTCACGCAGCAAGTaGATGCTGAAACTGGGACTA +
Preference number: 4 (lower is better)
Translates to: SHKRLPTNQLGAVAQAENRSRSK*MLKLGL
Trigger: TAGTCCCAGTTTCAGCATTCACTTGCTGCGTGACCT...ATTTTCTGCCTGAGCTACGGCACCAAGCTGGTTAGTCGGAAGGCGTTTGTGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000645528.2
CDS-3UTR GCA 90 bp GTGTATCTGAGCTTCCTGGCCTGTCCACTTCTCACTGTATTCTGGACTGGGTCTTCCTACAGGTGGGGGTaGAGAGGTGCTCATAGTTTG +
Preference number: 4 (lower is better)
Translates to: VYLSFLACPLLTVFWTGSSYRWG*RGAHSL
Trigger: CAAACTATGAGCACCTCTGCACCCCCACCTGTAGGA...AGACCCAGTCCAGAATACAGTGAGAAGTGGACAGGCCAGGAAGCTCAGATACAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR GCA 90 bp CCAAGGGGCAGAGCAGCCAGCTGGACCTGCTCTGTAATTCACTTACTTACTTACAGGATGCCACTAAGTTaGTCAGGGAAGTCCAGTGCC +
Preference number: 4 (lower is better)
Translates to: PRGRAASWTCSVIHLLTYRMPLS*SGKSSA
Trigger: GGCACTGGACTTCCCTGAGCAACTTAGTGGCATCCT...GTAAGTAAGTAAGTGAATTACAGAGCAGGTCCAGCTGGCTGCTCTGCCCCTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288139.11
ENST00000350061.11
CDS-3UTR GCA 90 bp TTTCAAGGCCTTAGCCACAAACGCCTTCCGACTAACCAGCTTGGTGCCGTAGCTTTGCCGCCAAACAGCTaGATCCCAAGCAAGGAAAAG +
Preference number: 4 (lower is better)
Translates to: FQGLSHKRLPTNQLGAVALPPNS*IPSKEK
Trigger: CTTTTCCTTGCTTGGGATGCAGCTGTTTGGCGGCAA...AGCTACGGCACCAAGCTGGTTAGTCGGAAGGCGTTTGTGGCTAAGGCCTTGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR GCA 90 bp ATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGGTGCTCCGCTTGGTTTaGGTTTCATCAAAATTAAAC +
Preference number: 4 (lower is better)
Translates to: MGEADSTAVPIWTMGQGRVLRLV*VSSKLN
Trigger: GTTTAATTTTGATGAAACGCAAACCAAGCGGAGCAC...CCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR GCA 90 bp AGCGCCGAGGGGCCTGTCAGTCTTTGGGAGTTCGGGCAAACTAGGGATGCAGGAGAACACTGTGAGAAGTaGTTGAGGGAAATTGTCAAA +
Preference number: 4 (lower is better)
Translates to: SAEGPVSLWEFGQTRDAGEHCEK*LREIVK
Trigger: TTTGACAATTTCCCTCAAGCACTTCTCACAGTGTTC...TCCTGCATCCCTAGTTTGCCCGAACTCCCAAAGACTGACAGGCCCCTCGGCGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636938.1
ENST00000640483.1
CDS-3UTR GCA 90 bp AGCCACAAACGCCTTCCGACTAACCAGCTTGGTGCCGTAGCTCAGGCAGAAAATTCTCCGCAAGGGACGTaGTTTCAAGGCGTATTCAAC +
Preference number: 4 (lower is better)
Translates to: SHKRLPTNQLGAVAQAENSPQGT*FQGVFN
Trigger: GTTGAATACGCCTTGAAAGCACGTCCCTTGCGGAGA...ATTTTCTGCCTGAGCTACGGCACCAAGCTGGTTAGTCGGAAGGCGTTTGTGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000636938.1
ENST00000638120.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR GCA 90 bp GGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTCCCCTTAGGCTTAAATaGGATGACTTTCAAAACCAT +
Preference number: 4 (lower is better)
Translates to: GEADSTAVPIWTMGQGRSPLRLK*DDFQNH
Trigger: ATGGTTTTGAAAGTCATCGCATTTAAGCCTAAGGGG...AGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR GCA 90 bp GGCCTTAGCCACAAACGCCTTCCGACTAACCAGCTTGGTGCCGTAGCTCAGGCAAGACAATGGCAAAGTTaGTCCCACATGTATACTCCT +
Preference number: 4 (lower is better)
Translates to: GLSHKRLPTNQLGAVAQARQWQS*SHMYTP
Trigger: AGGAGTATACATGTGGGAGCAACTTTGCCATTGTCT...TGCCTGAGCTACGGCACCAAGCTGGTTAGTCGGAAGGCGTTTGTGGCTAAGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636938.1
ENST00000638120.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR GCA 90 bp ATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCAGACTCCATCAGGCTCGTCATCTTaGAAATCACACGATATAGCA +
Preference number: 4 (lower is better)
Translates to: MPSVGWAWCPGTWEKQTPSGSSS*KSHDIA
Trigger: TGCTATATCGTGTGATTTGCAAGATGACGAGCCTGA...TGGAGTCTGCTTCTCCCATGTACCAGGGCACCAGGCCCACCCAACTGAAGGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR GCA 90 bp CGTATTTCAGAACAGCTAAACAGGAACCAGGACGCAGTGTATTTGGGGGAAAGGGCTCAAGGTTCCCAATaGTGGGCCGCTTTCCATGGG +
Preference number: 4 (lower is better)
Translates to: RISEQLNRNQDAVYLGERAQGSQ*WAAFHG
Trigger: CCCATGGAAAGCGGCCCAGCATTGGGAACCTTGAGC...CCTTTCCCCCAAATACACTGCGTCCTGGTTCCTGTTTAGCTGTTCTGAAATACG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR GCA 90 bp TTCTTAAGCAGCACCACCAGTCCCCAGAGGACAAGAGCAGCTATATCTCATCCACTACTGAAATACTCCTaGTCCCCCAAGCAGTGGGGG +
Preference number: 4 (lower is better)
Translates to: FLSSTTSPQRTRAAISHPLLKYS*SPKQWG
Trigger: CCCCCACTGCTTGGGGGAGCAGGAGTATTTCAGTAG...TGGATGAGATATAGCTGCTCTTGTCCTCTGGGGACTGGTGGTGCTGCTTAAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR GCA 90 bp TACATGGGAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCTTCTGCCTGGGTATCTaGTGTAGTAGCCATAGTTTT +
Preference number: 4 (lower is better)
Translates to: YMGEADSTAVPIWTMGQGFCLGI*CSSHSF
Trigger: AAAACTATGGCTACTACAGCAGATACCCAGGCAGAA...GCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR GCA 90 bp ACTGGCGTCACATCACAGAAAACCTTATTTATGAGGTCCCATTGCCCTCGCAATTCTTCCTGGCTGCTCTaGCGGCGCAGGCACTCAAAG +
Preference number: 4 (lower is better)
Translates to: TGVTSQKTLFMRSHCPRNSSWLL*RRRHSK
Trigger: CTTTGAGTGCCTGCGCCGGCAGAGCAGCCAGGAAGA...ATTGCGAGGGCAATGGGACCTCATAAATAAGGTTTTCTGTGATGTGACGCCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR GCA 90 bp TATTTCAGAACAGCTAAACAGGAACCAGGACGCAGTGTATTTGGGGGAAAGGGTTCCAGGGCCTCTGACTaGTCCACTTGGATCAGGGGG +
Preference number: 4 (lower is better)
Translates to: YFRTAKQEPGRSVFGGKGSRASD*STWIRG
Trigger: CCCCCTGATCCAAGTGGAGCAGTCAGAGGCCCTGGA...ACCCTTTCCCCCAAATACACTGCGTCCTGGTTCCTGTTTAGCTGTTCTGAAATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR GCA 90 bp GTCACATCACAGAAAACCTTATTTATGAGGTCCCATTGCCCTCGCAATAATCACCTGTGTACCAGGAGCTaGGGTGCAGGGACGGCAGGC +
Preference number: 4 (lower is better)
Translates to: VTSQKTLFMRSHCPRNNHLCTRS*GAGTAG
Trigger: GCCTGCCGTCCCTGCACCGCAGCTCCTGGTACACAG...GTGATTATTGCGAGGGCAATGGGACCTCATAAATAAGGTTTTCTGTGATGTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR GCA 90 bp ACTGGCGTCACATCACAGAAAACCTTATTTATGAGGTCCCATTGCCCTCGCAATGAGCGCATGGTACTCTaGCAGGCTCAACCGCTTGGG +
Preference number: 4 (lower is better)
Translates to: TGVTSQKTLFMRSHCPRNERMVL*QAQPLG
Trigger: CCCAAGCGGTTGAGCCTGGCAGAGTACCATGCGCTC...ATTGCGAGGGCAATGGGACCTCATAAATAAGGTTTTCTGTGATGTGACGCCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR GCA 90 bp TGCAACCCATGGTGGATCCAAAGGTACAGTATCAAAATCATGGAACTCTTGCCCGTTGGGTGGGCCTGGTaGCCTGGTACATGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: CNPWWIQRYSIKIMELLPVGWAW*PGTWEK
Trigger: CTTCTCCCATGTACCAGGGCACCAGGCCCACCCAAC...GGGCAAGAGTTCCATGATTTTGATACTGTACCTTTGGATCCACCATGGGTTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR GCA 90 bp AAACCGACCATCGGAGTGATATTCTCTTATGTAAACTGGCGTCACATCACAGAATGCACCCCGCCGCCATaGCTTCAGTTGGGTGGGCCT +
Preference number: 4 (lower is better)
Translates to: KPTIGVIFSYVNWRHITECTPPP*LQLGGP
Trigger: AGGCCCACCCAACTGAAGGCATGGCGGCGGGGTGCA...TTCTGTGATGTGACGCCAGTTTACATAAGAGAATATCACTCCGATGGTCGGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
ENST00000636448.1
CDS-3UTR GCA 90 bp GGTGATGCATATCATTTCATCCGCCAGGTCCTCCTCATCCCTCCCAGGGTCTGGTTTATGAGGTCCCATTaGCCTCGCAATAATCACTGG +
Preference number: 4 (lower is better)
Translates to: GDAYHFIRQVLLIPPRVWFMRSH*PRNNHW
Trigger: CCAGTGATTATTGCGAGGGCAATGGGACCTCATAAA...CCAGACCCTGGGAGGGATGAGGAGGACCTGGCGGATGAAATGATATGCATCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636448.1
CDS-3UTR GCA 90 bp CCGCCATGCCTTCAGTTGGGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCAGAACCCATGGATATTGCTaGAGTTCAAATACAATACAG +
Preference number: 4 (lower is better)
Translates to: PPCLQLGGPGALVHGRSRTHGYC*SSNTIQ
Trigger: CTGTATTGTATTTGAACTGCAGCAATATCCATGGGT...TCTGCTTCTCCCATGTACCAGGGCACCAGGCCCACCCAACTGAAGGCATGGCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR GCA 90 bp GGTGGGCCTGGTGCCCTGGTACATGGGAGAAGCAGACTCCACAGCAGTGCCCATAAATCATGGAACTCTTaGCCAAAGAAAAGACTGCAA +
Preference number: 4 (lower is better)
Translates to: GGPGALVHGRSRLHSSAHKSWNS*PKKRLQ
Trigger: TTGCAGTCTTTTCTTTGGGCAAGAGTTCCATGATTT...ATGGGCACTGCTGTGGAGTCTGCTTCTCCCATGTACCAGGGCACCAGGCCCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000636448.1
CDS-3UTR GCA 90 bp TCCTGTGGACACGTTAAGATGGAACCTGAGGTGTTGCCTGGATTGGTTTTGGCACACCTTCCGGAGGAGTaGTTTGCTTGGAAGGGGTCT +
Preference number: 4 (lower is better)
Translates to: SCGHVKMEPEVLPGLVLAHLPEE*FAWKGS
Trigger: AGACCCCTTCCAAGCAAAGCACTCCTCCGGAAGGTG...TGCCAAAACCAATCCAGGCAACACCTCAGGTTCCATCTTAACGTGTCCACAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636938.1
ENST00000640483.1
ENST00000645528.2
CDS-3UTR CCA 90 bp GACTTACTTACACACCGTATTTCAGAACAGCTAAACAGGAACCAGGACGCAGTGTTTGCCTCGTTCGCGTaGTCCGCTTGCTGCTGCCGT +
Preference number: 4 (lower is better)
Translates to: DLLTHRISEQLNRNQDAVFASFA*SACCCR
Trigger: ACGGCAGCAGCAAGCGGACCACGCGAACGAGGCAAA...CACTGCGTCCTGGTTCCTGTTTAGCTGTTCTGAAATACGGTGTGTAAGTAAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CCA 90 bp GTGTCTTGGGCTCAGCATCAGATGTACAGACTCCAACCACCACTTGGAATCAGCGAACGCACATGGAGCTaGGTCCTCTTCAGCTACGAT +
Preference number: 4 (lower is better)
Translates to: VSWAQHQMYRLQPPLGISERTWS*VLFSYD
Trigger: ATCGTAGCTGAAGAGGACCCAGCTCCATGTGCGTTC...GCTGATTCCAAGTGGTGGTTGGAGTCTGTACATCTGATGCTGAGCCCAAGACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636938.1
CDS-3UTR CCA 90 bp GGTTCCCTGACTCCCAGTGTCCTTGAAACTAGACCACACTGCTTCCAAAGAGGCTACATTCCGTGCCATTaGCAGTACACTGGCGTCCAT +
Preference number: 4 (lower is better)
Translates to: GSLTPSVLETRPHCFQRGYIPCH*QYTGVH
Trigger: ATGGACGCCAGTGTACTGCCAATGGCACGGAATGTA...GCCTCTTTGGAAGCAGTGTGGTCTAGTTTCAAGGACACTGGGAGTCAGGGAACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636938.1
CDS-3UTR CCA 90 bp GAGAAGCAGACTCCACAGCAGTGCCCATCTGGACAATGGGGCAGGGCAGGTCTGCCAAGAGGACTTTGTTaGCAATATCTTGAATCTGTG +
Preference number: 4 (lower is better)
Translates to: EKQTPQQCPSGQWGRAGLPRGLC*QYLESV
Trigger: CACAGATTCAAGATATTGCCAACAAAGTCCTCTTGG...CAGACCTGCCCTGCCCCATTGTCCAGATGGGCACTGCTGTGGAGTCTGCTTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288139.11
ENST00000350061.11
ENST00000422281.7
CDS-3UTR CCA 90 bp AGCGCCGAGGGGCCTGTCAGTCTTTGGGAGTTCGGGCAAACTAGGGATGCAGGACCAAGAGGACTTTGTTaGCAATATCTTGAATCTGTG