RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CACNA1B (Homo sapiens)

Ensembl gene IDs: ENSG00000148408

Ensembl transcript IDs: ENST00000277549.9, ENST00000277551.6, ENST00000371355.8, ENST00000371357.5, ENST00000371363.5, ENST00000371372.6, ENST00000413253.1

Found 1970 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCATCCCCTCCGTCCCGAGGTCTCGGCGCACTTTCAGGTGGGCCCTaGTTCTCTGTGCCGCACGGCCACGTGAAGGGTGCTCCCCACAGG +
Preference number: 1 (lower is better)
Translates to: PSPPSRGLGALSGGP*FSVPHGHVKGAPHR
Trigger: CCTGTGGGGAGCACCCTTCACGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTCGGGACGGAGGGGATGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR TCA 90 bp CTTGGTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGCCACCCGAGCTaGGTCCCAGGGTGCAGTGGTAACCGTTGGGCACGCGGCGGAGAG +
Preference number: 1 (lower is better)
Translates to: LGQGGGSCAVLGHPS*VPGCSGNRWARGGE
Trigger: CTCTCCGCCGCGTGCCCAACGGTTACCACTGCACCCTGGGACTCAGCTCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGACCAAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
3UTR TCA 90 bp ATCCCGAGGCCTCGCCTCACACCACAGTGCCCAGGAGCCTGGGTGTaGGGGCCTGGCGGTCAGGCACTTGGTCAAGAGCAGCAGAGCCAG +
Preference number: 1 (lower is better)
Translates to: IPRPRLTPQCPGAWV*GPGGQALGQEQQSQ
Trigger: CTGGCTCTGCTGCTCTTGACCAAGTGCCTGACCGCCAGGCCCTCACACCCAGGCTCCTGGGCACTGTGGTGTGAGGCGAGGCCTCGGGAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR TCA 90 bp CCGGCCTCAGTGGCAGGAGCCGTGTCCTCCCTCGGTCACTTGCTCTaGGTTTCATTCCAGCTGGGGCTTCCTCCCTCCTGCCCTGACGGC +
Preference number: 1 (lower is better)
Translates to: PASVAGAVSSLGHLL*VSFQLGLPPSCPDG
Trigger: GCCGTCAGGGCAGGAGGGAGGAAGCCCCAGCTGGAATGAAACTCAGAGCAAGTGACCGAGGGAGGACACGGCTCCTGCCACTGAGGCCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR GCA 90 bp TTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGTGAAGGGTaGTCCCCACAGGACGCAGAGCTCCTCACAACGGCTCCAAGCACC +
Preference number: 1 (lower is better)
Translates to: FRWALLLCAARPREG*SPQDAELLTTAPST
Trigger: GGTGCTTGGAGCCGTTGTGAGGAGCTCTGCGTCCTGTGGGGAGCACCCTTCACGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR GCA 90 bp AGACCTCACTTGACTGCCTGCTCCCTGTGTCTGGCGCCAGGACAGTaGTGGGCATCAGGTGCCCGGCCTCAGTGGCAGGAGCCGTGTCCT +
Preference number: 1 (lower is better)
Translates to: RPHLTACSLCLAPGQ*WASGARPQWQEPCP
Trigger: AGGACACGGCTCCTGCCACTGAGGCCGGGCACCTGATGCCCAGCACTGTCCTGGCGCCAGACACAGGGAGCAGGCAGTCAAGTGAGGTCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR GCA 90 bp CAGCTAGCACCAGTGGTCTTGGTCAGGGTGGTGGTAGCTGTGCCGTaGTCGGCCACCCGAGCTGAGTCCCAGGGTGCAGTGGTAACCGTT +
Preference number: 1 (lower is better)
Translates to: QLAPVVLVRVVVAVP*SATRAESQGAVVTV
Trigger: AACGGTTACCACTGCACCCTGGGACTCAGCTCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGACCAAGACCACTGGTGCTAGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
3UTR GCA 90 bp ACAGGAGCCTCACCAAGGTGGGCAAGGCCTCCCCCGAGGGCCGGCTaGCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTG +
Preference number: 1 (lower is better)
Translates to: TGASPRWARPPPRAG*PVWMIKLIHWNTRL
Trigger: CAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTCGGGGGAGGCCTTGCCCACCTTGGTGAGGCTCCTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR TCA 90 bp TGCTACCTGGCTGCCATCGCGAGTACTTTTCACAGCATCCTGCGGTaGTGGATCCCGAGGCCTCGCCTCACACCACAGTGCCCAGGAGCC +
Preference number: 1 (lower is better)
Translates to: CYLAAIASTFHSILR*WIPRPRLTPQCPGA
Trigger: GGCTCCTGGGCACTGTGGTGTGAGGCGAGGCCTCGGGATCCATCACCGCAGGATGCTGTGAAAAGTACTCGCGATGGCAGCCAGGTAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR GCA 90 bp GGGCTTGCTACCTGGCTGCCATCGCGAGTACTTTTCACAGCATCCTaGGGTGATGGATCCCGAGGCCTCGCCTCACACCACAGTGCCCAG +
Preference number: 1 (lower is better)
Translates to: GLATWLPSRVLFTAS*GDGSRGLASHHSAQ
Trigger: CTGGGCACTGTGGTGTGAGGCGAGGCCTCGGGATCCATCACCGCAGGATGCTGTGAAAAGTACTCGCGATGGCAGCCAGGTAGCAAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR TCA 90 bp GACGCAGAGCTCCTCACAACGGCTCCAAGCACCCATGCTGGATGCTaGGTCCCAGGACACGGGATTTGGACTCCTGGGTCCTTCTCAGCC +
Preference number: 1 (lower is better)
Translates to: DAELLTTAPSTHAGC*VPGHGIWTPGSFSA
Trigger: GGCTGAGAAGGACCCAGGAGTCCAAATCCCGTGTCCTGGGACTCAGCATCCAGCATGGGTGCTTGGAGCCGTTGTGAGGAGCTCTGCGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR CCA 90 bp CCTGGGTCCTTCTCAGCCACACACAGCAGCCTGCGGTTTAGGGTCTaGTGTGTGGTACGAGACCCAGGAAGGCAGGACAGGAAGGGGACA +
Preference number: 1 (lower is better)
Translates to: PGSFSATHSSLRFRV*CVVRDPGRQDRKGT
Trigger: TGTCCCCTTCCTGTCCTGCCTTCCTGGGTCTCGTACCACACACCAGACCCTAAACCGCAGGCTGCTGTGTGTGGCTGAGAAGGACCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR CCA 90 bp CCCACAGGACGCAGAGCTCCTCACAACGGCTCCAAGCACCCATGCTaGATGCTGAGTCCCAGGACACGGGATTTGGACTCCTGGGTCCTT +
Preference number: 1 (lower is better)
Translates to: PTGRRAPHNGSKHPC*MLSPRTRDLDSWVL
Trigger: AAGGACCCAGGAGTCCAAATCCCGTGTCCTGGGACTCAGCATCCAGCATGGGTGCTTGGAGCCGTTGTGAGGAGCTCTGCGTCCTGTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR GCA 90 bp ACGGGATTTGGACTCCTGGGTCCTTCTCAGCCACACACAGCAGCCTaGGGTTTAGGGTCTGGTGTGTGGTACGAGACCCAGGAAGGCAGG +
Preference number: 1 (lower is better)
Translates to: TGFGLLGPSQPHTAA*GLGSGVWYETQEGR
Trigger: CCTGCCTTCCTGGGTCTCGTACCACACACCAGACCCTAAACCGCAGGCTGCTGTGTGTGGCTGAGAAGGACCCAGGAGTCCAAATCCCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR TCA 90 bp CACTCGTGGGAGGAGGACAGCAAATGGCTGCCTTGTTTGCCACCATaGCATCCAGTGCTCTCCACTGGCAAGGGCTTGCTACCTGGCTGC +
Preference number: 1 (lower is better)
Translates to: HSWEEDSKWLPCLPP*HPVLSTGKGLLPGC
Trigger: GCAGCCAGGTAGCAAGCCCTTGCCAGTGGAGAGCACTGGATGTCATGGTGGCAAACAAGGCAGCCATTTGCTGTCCTCCTCCCACGAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR TCA 90 bp ATAAAACTCATCCACTGGAACACACGCCTGCTGCATGCAGGCGTCTaGGCGGTCACGGTGCAGCTAGCACCAGTGGTCTTGGTCAGGGTG +
Preference number: 1 (lower is better)
Translates to: IKLIHWNTRLLHAGV*AVTVQLAPVVLVRV
Trigger: CACCCTGACCAAGACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACGCCTGCATGCAGCAGGCGTGTGTTCCAGTGGATGAGTTTTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
3UTR CCA 90 bp GCCACCATGACATCCAGTGCTCTCCACTGGCAAGGGCTTGCTACCTaGCTGCCATCGCGAGTACTTTTCACAGCATCCTGCGGTGATGGA +
Preference number: 1 (lower is better)
Translates to: ATMTSSALHWQGLAT*LPSRVLFTASCGDG
Trigger: TCCATCACCGCAGGATGCTGTGAAAAGTACTCGCGATGGCAGCCAGGTAGCAAGCCCTTGCCAGTGGAGAGCACTGGATGTCATGGTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR GCA 90 bp CGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGCATaGAGGCGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTCTT +
Preference number: 1 (lower is better)
Translates to: RVDDKTHPLEHTPAA*RRLSGHGAASTSGL
Trigger: AAGACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACGCCTGCATGCAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
3UTR GCA 90 bp TATGCAGAACAGACTGAAAATGCCTCACACAAGCACGTGGTCAGCTaGCCTGTGGCTTCCTTGGAAACCCCTTCCACTCGTGGGAGGAGG +
Preference number: 1 (lower is better)
Translates to: YAEQTENASHKHVVS*PVASLETPSTRGRR
Trigger: CCTCCTCCCACGAGTGGAAGGGGTTTCCAAGGAAGCCACAGGGCAGCTGACCACGTGCTTGTGTGAGGCATTTTCAGTCTGTTCTGCATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR CCA 90 bp AACAGACTGAAAATGCCTCACACAAGCACGTGGTCAGCTGCCCTGTaGCTTCCTTGGAAACCCCTTCCACTCGTGGGAGGAGGACAGCAA +
Preference number: 1 (lower is better)
Translates to: NRLKMPHTSTWSAAL*LPWKPLPLVGGGQQ
Trigger: TTGCTGTCCTCCTCCCACGAGTGGAAGGGGTTTCCAAGGAAGCCACAGGGCAGCTGACCACGTGCTTGTGTGAGGCATTTTCAGTCTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR GCA 90 bp AGTGGATTCTCGACCCAACACTGCCTGGGGAAATGGCTGTGGTTCTaGATGGAATGGACACATTCGACACCCAAGATAACATGGGCTGGG +
Preference number: 1 (lower is better)
Translates to: SGFSTQHCLGKWLWF*MEWTHSTPKITWAG
Trigger: CCCAGCCCATGTTATCTTGGGTGTCGAATGTGTCCATTCCATGCAGAACCACAGCCATTTCCCCAGGCAGTGTTGGGTCGAGAATCCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR CCA 90 bp GAGAATCATATGCAGAACAGACTGAAAATGCCTCACACAAGCACGTaGTCAGCTGCCCTGTGGCTTCCTTGGAAACCCCTTCCACTCGTG +
Preference number: 1 (lower is better)
Translates to: ENHMQNRLKMPHTST*SAALWLPWKPLPLV
Trigger: CACGAGTGGAAGGGGTTTCCAAGGAAGCCACAGGGCAGCTGACCACGTGCTTGTGTGAGGCATTTTCAGTCTGTTCTGCATATGATTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR TCA 90 bp TCACATACCACAGAGTGTGCCCTGAGAATCATATGCAGAACAGACTaGAAATGCCTCACACAAGCACGTGGTCAGCTGCCCTGTGGCTTC +
Preference number: 1 (lower is better)
Translates to: SHTTECALRIICRTD*KCLTQARGQLPCGF
Trigger: GAAGCCACAGGGCAGCTGACCACGTGCTTGTGTGAGGCATTTTCAGTCTGTTCTGCATATGATTCTCAGGGCACACTCTGTGGTATGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR CCA 90 bp AGGCTGTGTGGGTTTAGAAAAGTGGATTCTCGACCCAACACTGCCTaGGGAAATGGCTGTGGTTCTGCATGGAATGGACACATTCGACAC +
Preference number: 1 (lower is better)
Translates to: RLCGFRKVDSRPNTA*GNGCGSAWNGHIRH
Trigger: GTGTCGAATGTGTCCATTCCATGCAGAACCACAGCCATTTCCCCAGGCAGTGTTGGGTCGAGAATCCACTTTTCTAAACCCACACAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR GCA 90 bp GGAATTTCAGAACACGGAGGACACACCACCATCAACTGCTCTAAATaGTCCCTTTCTTCACCAAACAAGGGACCTCCCAGCATCTTGTGC +
Preference number: 1 (lower is better)
Translates to: GISEHGGHTTINCSK*SLSSPNKGPPSILC
Trigger: GCACAAGATGCTGGGAGGTCCCTTGTTTGGTGAAGAAAGGGAGCATTTAGAGCAGTTGATGGTGGTGTGTCCTCCGTGTTCTGAAATTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR GCA 90 bp AGATCATCTGGAATTTCAGAACACGGAGGACACACCACCATCAACTaGTCTAAATGCTCCCTTTCTTCACCAAACAAGGGACCTCCCAGC +
Preference number: 1 (lower is better)
Translates to: RSSGISEHGGHTTIN*SKCSLSSPNKGPPS
Trigger: GCTGGGAGGTCCCTTGTTTGGTGAAGAAAGGGAGCATTTAGAGCAGTTGATGGTGGTGTGTCCTCCGTGTTCTGAAATTCCAGATGATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR CCA 90 bp TGTCTTCCTCCTTCCTACCAGCCTTTGCCTCTCTTCTGCTGTATGTaGAAGGAAACCTATTTCACATACCACAGAGTGTGCCCTGAGAAT +
Preference number: 1 (lower is better)
Translates to: CLPPSYQPLPLFCCM*KETYFTYHRVCPEN
Trigger: ATTCTCAGGGCACACTCTGTGGTATGTGAAATAGGTTTCCTTCCACATACAGCAGAAGAGAGGCAAAGGCTGGTAGGAAGGAGGAAGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR TCA 90 bp CTGTATGTGGAAGGAAACCTATTTCACATACCACAGAGTGTGCCCTaGGAATCATATGCAGAACAGACTGAAAATGCCTCACACAAGCAC +
Preference number: 1 (lower is better)
Translates to: LYVEGNLFHIPQSVP*ESYAEQTENASHKH
Trigger: GTGCTTGTGTGAGGCATTTTCAGTCTGTTCTGCATATGATTCTCAGGGCACACTCTGTGGTATGTGAAATAGGTTTCCTTCCACATACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR GCA 90 bp AACAAGAGACAAAACGTCAGTGTCAAAATACACATCCTTCTACTTTaGAACAGGAGCACAGTGATCACATGCACAGTCCGAGATTCCTGG +
Preference number: 1 (lower is better)
Translates to: NKRQNVSVKIHILLL*NRSTVITCTVRDSW
Trigger: CCAGGAATCTCGGACTGTGCATGTGATCACTGTGCTCCTGTTGCAAAGTAGAAGGATGTGTATTTTGACACTGACGTTTTGTCTCTTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR TCA 90 bp ACACACACACACACACACACACACACACATCACACACAATTTCTTTaGGGAGAATCATGGGGTAGAAGCCAAGAATCCAACACAGATCAT +
Preference number: 1 (lower is better)
Translates to: THTHTHTHTHHTQFL*GESWGRSQESNTDH
Trigger: ATGATCTGTGTTGGATTCTTGGCTTCTACCCCATGATTCTCCTCAAAGAAATTGTGTGTGATGTGTGTGTGTGTGTGTGTGTGTGTGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR GCA 90 bp GTATATATGTTACATGCACACATAACTTGTTCAAACTACAGCCACTaGTTGACTGGTTCCAGATGCAGACAACTGGGTGATGCACTTCAA +
Preference number: 1 (lower is better)
Translates to: VYMLHAHITCSNYSH*LTGSRCRQLGDALQ
Trigger: TTGAAGTGCATCACCCAGTTGTCTGCATCTGGAACCAGTCAAGCAGTGGCTGTAGTTTGAACAAGTTATGTGTGCATGTAACATATATAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR TCA 90 bp TCAGTGTCAAAATACACATCCTTCTACTTTGCAACAGGAGCACAGTaGTCACATGCACAGTCCGAGATTCCTGGTTTATTCTATTGGAAT +
Preference number: 1 (lower is better)
Translates to: SVSKYTSFYFATGAQ*SHAQSEIPGLFYWN
Trigger: ATTCCAATAGAATAAACCAGGAATCTCGGACTGTGCATGTGATCACTGTGCTCCTGTTGCAAAGTAGAAGGATGTGTATTTTGACACTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR GCA 90 bp CACAGGAGCCTCACCAAGGTGGGCAAGGCCTCCCCCGAGGGCCGGCTGCCCCGTACTGGAACACACGCCTaGTGCATGCAGGCGTCTGAG +
Preference number: 2 (lower is better)
Translates to: HRSLTKVGKASPEGRLPRTGTHA*CMQASE
Trigger: CTCAGACGCCTGCATGCAGCAGGCGTGTGTTCCAGT...ACGGGGCAGCCGGCCCTCGGGGGAGGCCTTGCCCACCTTGGTGAGGCTCCTGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR GCA 90 bp CCCCTCCGTCCCGAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCCCCCGAGGGCCGGCTaGCCCGTGTGGATGATAAAA +
Preference number: 2 (lower is better)
Translates to: PLRPEVSAHFQVGPASLCPPRAG*PVWMIK
Trigger: TTTTATCATCCACACGGGGCAGCCGGCCCTCGGGGG...GCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTCGGGACGGAGGGG
67% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR GCA 90 bp TGGCGCCAGGACAGTGCTGGGCATCAGGTGCCCGGCCTCAGTGGCAGGAGCCGTCTGACACTGGCGGGCTaGACAAGCCACGACTGTGTC +
Preference number: 2 (lower is better)
Translates to: WRQDSAGHQVPGLSGRSRLTLAG*TSHDCV
Trigger: GACACAGTCGTGGCTTGTGCAGCCCGCCAGTGTCAG...ACGGCTCCTGCCACTGAGGCCGGGCACCTGATGCCCAGCACTGTCCTGGCGCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR GCA 90 bp GCCCGGCCTCAGTGGCAGGAGCCGTGTCCTCCCTCGGTCACTTGCTCTGAGTTTCGGCCACGTGAAGGGTaGTCCCCACAGGACGCAGAG +
Preference number: 2 (lower is better)
Translates to: ARPQWQEPCPPSVTCSEFRPREG*SPQDAE
Trigger: CTCTGCGTCCTGTGGGGAGCACCCTTCACGTGGCCG...AAACTCAGAGCAAGTGACCGAGGGAGGACACGGCTCCTGCCACTGAGGCCGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR CCA 90 bp TTGGTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGCCACCCGAGCTGAGTCCCAGTGCAGTGGTAACCGTTaGGCACGCGGCGGAGAGGGT +
Preference number: 2 (lower is better)
Translates to: LVRVVVAVPCSATRAESQCSGNR*ARGGEG
Trigger: ACCCTCTCCGCCGCGTGCCCAACGGTTACCACTGCA...CTGGGACTCAGCTCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGACCAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
3UTR-3UTR TCA 90 bp GTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCCCTTCCACTCGTGGGAGGAGGCACAGCATCCTGCGGTaGTGGATCCCGAGGCCTCGC +
Preference number: 2 (lower is better)
Translates to: VVSCPVASLETPSTRGRRHSILR*WIPRPR
Trigger: GCGAGGCCTCGGGATCCATCACCGCAGGATGCTGTG...CCTCCTCCCACGAGTGGAAGGGGTTTCCAAGGAAGCCACAGGGCAGCTGACCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR GCA 90 bp TGGCGCCAGGACAGTGCTGGGCATCAGGTGCCCGGCCTCAGTGGCAGGAGCCGTCACCATGACATCCAGTaGTCTCCACTGGCAAGGGCT +
Preference number: 2 (lower is better)
Translates to: WRQDSAGHQVPGLSGRSRHHDIQ*SPLARA
Trigger: AGCCCTTGCCAGTGGAGAGCACTGGATGTCATGGTG...ACGGCTCCTGCCACTGAGGCCGGGCACCTGATGCCCAGCACTGTCCTGGCGCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR CCA 90 bp TGGCGCCAGGACAGTGCTGGGCATCAGGTGCCCGGCCTCAGTGGCAGGAGCCGTTTAGGGTCTGGTGTGTaGTACGAGACCCAGGAAGGC +
Preference number: 2 (lower is better)
Translates to: WRQDSAGHQVPGLSGRSRLGSGV*YETQEG
Trigger: GCCTTCCTGGGTCTCGTACCACACACCAGACCCTAA...ACGGCTCCTGCCACTGAGGCCGGGCACCTGATGCCCAGCACTGTCCTGGCGCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR GCA 90 bp GCTTGCCTGAGTGAGCATTCGCTGACACTGGCGGGCTGCACAAGCCACGACTGTCGGCCACGTGAAGGGTaGTCCCCACAGGACGCAGAG +
Preference number: 2 (lower is better)
Translates to: ACLSEHSLTLAGCTSHDCRPREG*SPQDAE
Trigger: CTCTGCGTCCTGTGGGGAGCACCCTTCACGTGGCCG...ACAGTCGTGGCTTGTGCAGCCCGCCAGTGTCAGCGAATGCTCACTCAGGCAAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR CCA 90 bp GTGCAGCTAGCACCAGTGGTCTTGGTCAGGGTGGTGGTAGCTGTGCCGTGCTCGTGCAGTGGTAACCGTTaGGCACGCGGCGGAGAGGGT +
Preference number: 2 (lower is better)
Translates to: VQLAPVVLVRVVVAVPCSCSGNR*ARGGEG
Trigger: ACCCTCTCCGCCGCGTGCCCAACGGTTACCACTGCA...CGAGCACGGCACAGCTACCACCACCCTGACCAAGACCACTGGTGCTAGCTGCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
3UTR-3UTR CCA 90 bp CCCCTCCGTCCCGAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGGGATTTGGACTCCTaGGTCCTTCTCAGCCACACA +
Preference number: 2 (lower is better)
Translates to: PLRPEVSAHFQVGPASLCRDLDS*VLLSHT
Trigger: TGTGTGGCTGAGAAGGACCCAGGAGTCCAAATCCCG...GCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTCGGGACGGAGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR CCA 90 bp CCCCTCCGTCCCGAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCTCCAAGCACCCATGCTaGATGCTGAGTCCCAGGACA +
Preference number: 2 (lower is better)
Translates to: PLRPEVSAHFQVGPASLCSKHPC*MLSPRT
Trigger: TGTCCTGGGACTCAGCATCCAGCATGGGTGCTTGGA...GCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTCGGGACGGAGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR TCA 90 bp CCACGTGAAGGGTGCTCCCCACAGGACGCAGAGCTCCTCACAACGGCTCCAAGCACCCATGCTGGATGCTaGGTCCCAGGACACGGGATT +
Preference number: 2 (lower is better)
Translates to: PREGCSPQDAELLTTAPSTHAGC*VPGHGI
Trigger: AATCCCGTGTCCTGGGACTCAGCATCCAGCATGGGT...GCTTGGAGCCGTTGTGAGGAGCTCTGCGTCCTGTGGGGAGCACCCTTCACGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR TCA 90 bp CTCGTGGGAGGAGGACAGCAAATGGCTGCCTTGTTTGCCACCATGACATCCAGTCCAGGAGCCTGGGTGTaGGGGCCTGGCGGTCAGGCA +
Preference number: 2 (lower is better)
Translates to: LVGGGQQMAALFATMTSSPGAWV*GPGGQA
Trigger: TGCCTGACCGCCAGGCCCTCACACCCAGGCTCCTGG...ACTGGATGTCATGGTGGCAAACAAGGCAGCCATTTGCTGTCCTCCTCCCACGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR GCA 90 bp GCTTGCCTGAGTGAGCATTCGCTGACACTGGCGGGCTGCACAAGCCACGACTGTCCCCCGAGGGCCGGCTaGCCCGTGTGGATGATAAAA +
Preference number: 2 (lower is better)
Translates to: ACLSEHSLTLAGCTSHDCPPRAG*PVWMIK
Trigger: TTTTATCATCCACACGGGGCAGCCGGCCCTCGGGGG...ACAGTCGTGGCTTGTGCAGCCCGCCAGTGTCAGCGAATGCTCACTCAGGCAAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR CCA 90 bp GCCCGGCCTCAGTGGCAGGAGCCGTGTCCTCCCTCGGTCACTTGCTCTGAGTTTGCCCTGTGGCTTCCTTaGAAACCCCTTCCACTCGTG +
Preference number: 2 (lower is better)
Translates to: ARPQWQEPCPPSVTCSEFALWLP*KPLPLV
Trigger: CACGAGTGGAAGGGGTTTCCAAGGAAGCCACAGGGC...AAACTCAGAGCAAGTGACCGAGGGAGGACACGGCTCCTGCCACTGAGGCCGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR CAA 90 bp GGCTCCAAGCACCCATGCTGGATGCTGAGTCCCAGGACACGGGATTaGGACTCCTGGGTCCTTCTCAGCCACACACAGCAGCCTGCGGTT +
Preference number: 2 (lower is better)
Translates to: GSKHPCWMLSPRTRD*DSWVLLSHTQQPAV
Trigger: AACCGCAGGCTGCTGTGTGTGGCTGAGAAGGACCCAGGAGTCCAAATCCCGTGTCCTGGGACTCAGCATCCAGCATGGGTGCTTGGAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR TCA 90 bp GTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCCCTTCCACTCGTGGGAGGAGGCAGAGCTTGCCTGAGTaGGCATTCGCTGACACTGGC +
Preference number: 2 (lower is better)
Translates to: VVSCPVASLETPSTRGRRQSLPE*AFADTG
Trigger: GCCAGTGTCAGCGAATGCTCACTCAGGCAAGCTCTG...CCTCCTCCCACGAGTGGAAGGGGTTTCCAAGGAAGCCACAGGGCAGCTGACCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR TCA 90 bp CGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGCATGCAGGCGTCTCGGCCACCCGAGCTaGGTCCCAGGGTGCAGTGGT +
Preference number: 2 (lower is better)
Translates to: RVDDKTHPLEHTPAACRRLGHPS*VPGCSG
Trigger: ACCACTGCACCCTGGGACTCAGCTCGGGTGGCCGAG...ACGCCTGCATGCAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
3UTR-3UTR TCA 90 bp GCTAGGCTGTGTGGGTTTAGAAAAGTGGATTCTCGACCCAACACTGCCTGGGGATGCCGCACGGCCACGTaGAGGGTGCTCCCCACAGGA +
Preference number: 2 (lower is better)
Translates to: ARLCGFRKVDSRPNTAWGCRTAT*RVLPTG
Trigger: TCCTGTGGGGAGCACCCTTCACGTGGCCGTGCGGCA...TCCCCAGGCAGTGTTGGGTCGAGAATCCACTTTTCTAAACCCACACAGCCTAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR TCA 90 bp GAAAATGCCTCACACAAGCACGTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCCGGTTCCTGTGGGGCTaGCGGTGTCCAGGGAGGACA +
Preference number: 2 (lower is better)
Translates to: ENASHKHVVSCPVASLETRFLWG*RCPGRT
Trigger: TGTCCTCCCTGGACACCGTCAGCCCCACAGGAACCG...GGTTTCCAAGGAAGCCACAGGGCAGCTGACCACGTGCTTGTGTGAGGCATTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR GCA 90 bp GTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCCCTTCCACTCGTGGGAGGAGGCACCATGACATCCAGTaGTCTCCACTGGCAAGGGCT +
Preference number: 2 (lower is better)
Translates to: VVSCPVASLETPSTRGRRHHDIQ*SPLARA
Trigger: AGCCCTTGCCAGTGGAGAGCACTGGATGTCATGGTG...CCTCCTCCCACGAGTGGAAGGGGTTTCCAAGGAAGCCACAGGGCAGCTGACCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR GCA 90 bp GCTAGGCTGTGTGGGTTTAGAAAAGTGGATTCTCGACCCAACACTGCCTGGGGACTGGCGCCAGGACAGTaGTGGGCATCAGGTGCCCGG +
Preference number: 2 (lower is better)
Translates to: ARLCGFRKVDSRPNTAWGLAPGQ*WASGAR
Trigger: CCGGGCACCTGATGCCCAGCACTGTCCTGGCGCCAG...TCCCCAGGCAGTGTTGGGTCGAGAATCCACTTTTCTAAACCCACACAGCCTAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR CCA 90 bp TCTTCACCAAACAAGGGACCTCCCAGCATCTTGTGCACCTTGGACAGTGTCCTGGGAGCCTCACCAAGGTaGGCAAGGCCTCCCCCGAGG +
Preference number: 2 (lower is better)
Translates to: SSPNKGPPSILCTLDSVLGASPR*ARPPPR
Trigger: CCTCGGGGGAGGCCTTGCCCACCTTGGTGAGGCTCC...CAGGACACTGTCCAAGGTGCACAAGATGCTGGGAGGTCCCTTGTTTGGTGAAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR CCA 90 bp TCCAGGGAGGACAGAGCTTGCCTGAGTGAGCATTCGCTGACACTGGCGGGCTGCCGGGATTTGGACTCCTaGGTCCTTCTCAGCCACACA +
Preference number: 2 (lower is better)
Translates to: SREDRACLSEHSLTLAGCRDLDS*VLLSHT
Trigger: TGTGTGGCTGAGAAGGACCCAGGAGTCCAAATCCCG...GCAGCCCGCCAGTGTCAGCGAATGCTCACTCAGGCAAGCTCTGTCCTCCCTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR GCA 90 bp GGATTCTCGACCCAACACTGCCTGGGGAAATGGCTGTGGTTCTGCATGGAATGGCACACGCCTGCTGCATaGAGGCGTCTGAGCGGTCAC +
Preference number: 2 (lower is better)
Translates to: GFSTQHCLGKWLWFCMEWHTPAA*RRLSGH
Trigger: GTGACCGCTCAGACGCCTGCATGCAGCAGGCGTGTG...CCATTCCATGCAGAACCACAGCCATTTCCCCAGGCAGTGTTGGGTCGAGAATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR GCA 90 bp GAAAATGCCTCACACAAGCACGTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCCACACGCCTGCTGCATaGAGGCGTCTGAGCGGTCAC +
Preference number: 2 (lower is better)
Translates to: ENASHKHVVSCPVASLETHTPAA*RRLSGH
Trigger: GTGACCGCTCAGACGCCTGCATGCAGCAGGCGTGTG...GGTTTCCAAGGAAGCCACAGGGCAGCTGACCACGTGCTTGTGTGAGGCATTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR GCA 90 bp CTCGTGGGAGGAGGACAGCAAATGGCTGCCTTGTTTGCCACCATGACATCCAGTCTTTCAGGTGGGCCCTaGTTCTCTGTGCCGCACGGC +
Preference number: 2 (lower is better)
Translates to: LVGGGQQMAALFATMTSSLSGGP*FSVPHG
Trigger: GCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAG...ACTGGATGTCATGGTGGCAAACAAGGCAGCCATTTGCTGTCCTCCTCCCACGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR CCA 90 bp GCTTGCCTGAGTGAGCATTCGCTGACACTGGCGGGCTGCACAAGCCACGACTGTCTGCGGTTTAGGGTCTaGTGTGTGGTACGAGACCCA +
Preference number: 2 (lower is better)
Translates to: ACLSEHSLTLAGCTSHDCLRFRV*CVVRDP
Trigger: TGGGTCTCGTACCACACACCAGACCCTAAACCGCAG...ACAGTCGTGGCTTGTGCAGCCCGCCAGTGTCAGCGAATGCTCACTCAGGCAAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR CCA 90 bp AGACTGAAAATGCCTCACACAAGCACGTGGTCAGCTGCCCTGTGGCTTCCTTGGCGGCGCACTTTCAGGTaGGCCCTGCTTCTCTGTGCC +
Preference number: 2 (lower is better)
Translates to: RLKMPHTSTWSAALWLPWRRTFR*ALLLCA
Trigger: GGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCG...CCAAGGAAGCCACAGGGCAGCTGACCACGTGCTTGTGTGAGGCATTTTCAGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR CCA 90 bp GGATTCTCGACCCAACACTGCCTGGGGAAATGGCTGTGGTTCTGCATGGAATGGCGGCGCACTTTCAGGTaGGCCCTGCTTCTCTGTGCC +
Preference number: 2 (lower is better)
Translates to: GFSTQHCLGKWLWFCMEWRRTFR*ALLLCA
Trigger: GGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCG...CCATTCCATGCAGAACCACAGCCATTTCCCCAGGCAGTGTTGGGTCGAGAATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR CCA 90 bp GGATTCTCGACCCAACACTGCCTGGGGAAATGGCTGTGGTTCTGCATGGAATGGCTGGGTGTGAGGGCCTaGCGGTCAGGCACTTGGTCA +
Preference number: 2 (lower is better)
Translates to: GFSTQHCLGKWLWFCMEWLGVRA*RSGTWS
Trigger: TGACCAAGTGCCTGACCGCCAGGCCCTCACACCCAG...CCATTCCATGCAGAACCACAGCCATTTCCCCAGGCAGTGTTGGGTCGAGAATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR CCA 90 bp GCTAGGCTGTGTGGGTTTAGAAAAGTGGATTCTCGACCCAACACTGCCTGGGGACCTGCTCCCTGTGTCTaGCGCCAGGACAGTGCTGGG +
Preference number: 2 (lower is better)
Translates to: ARLCGFRKVDSRPNTAWGPAPCV*RQDSAG
Trigger: CCCAGCACTGTCCTGGCGCCAGACACAGGGAGCAGG...TCCCCAGGCAGTGTTGGGTCGAGAATCCACTTTTCTAAACCCACACAGCCTAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR GCA 90 bp GCTAGGCTGTGTGGGTTTAGAAAAGTGGATTCTCGACCCAACACTGCCTGGGGACACACGCCTGCTGCATaGAGGCGTCTGAGCGGTCAC +
Preference number: 2 (lower is better)
Translates to: ARLCGFRKVDSRPNTAWGHTPAA*RRLSGH
Trigger: GTGACCGCTCAGACGCCTGCATGCAGCAGGCGTGTG...TCCCCAGGCAGTGTTGGGTCGAGAATCCACTTTTCTAAACCCACACAGCCTAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR GCA 90 bp CTCGTGGGAGGAGGACAGCAAATGGCTGCCTTGTTTGCCACCATGACATCCAGTCTGACACTGGCGGGCTaGACAAGCCACGACTGTGTC +
Preference number: 2 (lower is better)
Translates to: LVGGGQQMAALFATMTSSLTLAG*TSHDCV
Trigger: GACACAGTCGTGGCTTGTGCAGCCCGCCAGTGTCAG...ACTGGATGTCATGGTGGCAAACAAGGCAGCCATTTGCTGTCCTCCTCCCACGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR CCA 90 bp TCTTCACCAAACAAGGGACCTCCCAGCATCTTGTGCACCTTGGACAGTGTCCTGCCGTCTACGTCCACCTaGACCGGACAGGGCTGCACA +
Preference number: 2 (lower is better)
Translates to: SSPNKGPPSILCTLDSVLPSTST*TGQGCT
Trigger: TGTGCAGCCCTGTCCGGTCCAGGTGGACGTAGACGG...CAGGACACTGTCCAAGGTGCACAAGATGCTGGGAGGTCCCTTGTTTGGTGAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR CCA 90 bp TGGCGCCAGGACAGTGCTGGGCATCAGGTGCCCGGCCTCAGTGGCAGGAGCCGTCTCTTCTGCTGTATGTaGAAGGAAACCTATTTCACA +
Preference number: 2 (lower is better)
Translates to: WRQDSAGHQVPGLSGRSRLFCCM*KETYFT
Trigger: TGTGAAATAGGTTTCCTTCCACATACAGCAGAAGAG...ACGGCTCCTGCCACTGAGGCCGGGCACCTGATGCCCAGCACTGTCCTGGCGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR GCA 90 bp AGACTGAAAATGCCTCACACAAGCACGTGGTCAGCTGCCCTGTGGCTTCCTTGGACTGGAACACACGCCTaGTGCATGCAGGCGTCTGAG +
Preference number: 2 (lower is better)
Translates to: RLKMPHTSTWSAALWLPWTGTHA*CMQASE
Trigger: CTCAGACGCCTGCATGCAGCAGGCGTGTGTTCCAGT...CCAAGGAAGCCACAGGGCAGCTGACCACGTGCTTGTGTGAGGCATTTTCAGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR GCA 90 bp GCCCGGCCTCAGTGGCAGGAGCCGTGTCCTCCCTCGGTCACTTGCTCTGAGTTTACATACCACAGAGTGTaGCCTGAGAATCATATGCAG +
Preference number: 2 (lower is better)
Translates to: ARPQWQEPCPPSVTCSEFTYHRV*PENHMQ
Trigger: CTGCATATGATTCTCAGGGCACACTCTGTGGTATGT...AAACTCAGAGCAAGTGACCGAGGGAGGACACGGCTCCTGCCACTGAGGCCGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR CCA 90 bp GAAAATGCCTCACACAAGCACGTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCTGGCGGTCAGGCACTTaGTCAAGAGCAGCAGAGCCA +
Preference number: 2 (lower is better)
Translates to: ENASHKHVVSCPVASLETWRSGT*SRAAEP
Trigger: TGGCTCTGCTGCTCTTGACCAAGTGCCTGACCGCCA...GGTTTCCAAGGAAGCCACAGGGCAGCTGACCACGTGCTTGTGTGAGGCATTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR TCA 90 bp TCTTCACCAAACAAGGGACCTCCCAGCATCTTGTGCACCTTGGACAGTGTCCTGACCCATGCTGGATGCTaGGTCCCAGGACACGGGATT +
Preference number: 2 (lower is better)
Translates to: SSPNKGPPSILCTLDSVLTHAGC*VPGHGI
Trigger: AATCCCGTGTCCTGGGACTCAGCATCCAGCATGGGT...CAGGACACTGTCCAAGGTGCACAAGATGCTGGGAGGTCCCTTGTTTGGTGAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR TCA 90 bp TCATGGGGTAGAAGCCAAGAATCCAACACAGATCATCTGGAATTTCAGAACACGCCAGGAGCCTGGGTGTaGGGGCCTGGCGGTCAGGCA +
Preference number: 2 (lower is better)
Translates to: SWGRSQESNTDHLEFQNTPGAWV*GPGGQA
Trigger: TGCCTGACCGCCAGGCCCTCACACCCAGGCTCCTGG...CGTGTTCTGAAATTCCAGATGATCTGTGTTGGATTCTTGGCTTCTACCCCATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR TCA 90 bp GGGGTAGAAGCCAAGAATCCAACACAGATCATCTGGAATTTCAGAACACGGAGGCACAGCATCCTGCGGTaGTGGATCCCGAGGCCTCGC +
Preference number: 2 (lower is better)
Translates to: GVEAKNPTQIIWNFRTRRHSILR*WIPRPR
Trigger: GCGAGGCCTCGGGATCCATCACCGCAGGATGCTGTG...CCTCCGTGTTCTGAAATTCCAGATGATCTGTGTTGGATTCTTGGCTTCTACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR GCA 90 bp GGATTCTCGACCCAACACTGCCTGGGGAAATGGCTGTGGTTCTGCATGGAATGGAAGCACGTGGTCAGCTaGCCTGTGGCTTCCTTGGAA +
Preference number: 2 (lower is better)
Translates to: GFSTQHCLGKWLWFCMEWKHVVS*PVASLE
Trigger: TTCCAAGGAAGCCACAGGGCAGCTGACCACGTGCTT...CCATTCCATGCAGAACCACAGCCATTTCCCCAGGCAGTGTTGGGTCGAGAATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR GCA 90 bp GGATTCTCGACCCAACACTGCCTGGGGAAATGGCTGTGGTTCTGCATGGAATGGCCTCCCAGCATCTTGTaGACCTTGGACAGTGTCCTG +
Preference number: 2 (lower is better)
Translates to: GFSTQHCLGKWLWFCMEWPPSIL*TLDSVL
Trigger: CAGGACACTGTCCAAGGTGCACAAGATGCTGGGAGG...CCATTCCATGCAGAACCACAGCCATTTCCCCAGGCAGTGTTGGGTCGAGAATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR CCA 90 bp AGACTGAAAATGCCTCACACAAGCACGTGGTCAGCTGCCCTGTGGCTTCCTTGGGCCGGCTGCCCCGTGTaGATGATAAAACTCATCCAC +
Preference number: 2 (lower is better)
Translates to: RLKMPHTSTWSAALWLPWAGCPV*MIKLIH
Trigger: GTGGATGAGTTTTATCATCCACACGGGGCAGCCGGC...CCAAGGAAGCCACAGGGCAGCTGACCACGTGCTTGTGTGAGGCATTTTCAGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR CCA 90 bp GAAAATGCCTCACACAAGCACGTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCTCCAAGCACCCATGCTaGATGCTGAGTCCCAGGACA +
Preference number: 2 (lower is better)
Translates to: ENASHKHVVSCPVASLETSKHPC*MLSPRT
Trigger: TGTCCTGGGACTCAGCATCCAGCATGGGTGCTTGGA...GGTTTCCAAGGAAGCCACAGGGCAGCTGACCACGTGCTTGTGTGAGGCATTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR CCA 90 bp AGACTGAAAATGCCTCACACAAGCACGTGGTCAGCTGCCCTGTGGCTTCCTTGGTCCAAGCACCCATGCTaGATGCTGAGTCCCAGGACA +
Preference number: 2 (lower is better)
Translates to: RLKMPHTSTWSAALWLPWSKHPC*MLSPRT
Trigger: TGTCCTGGGACTCAGCATCCAGCATGGGTGCTTGGA...CCAAGGAAGCCACAGGGCAGCTGACCACGTGCTTGTGTGAGGCATTTTCAGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR CCA 90 bp TCTTCACCAAACAAGGGACCTCCCAGCATCTTGTGCACCTTGGACAGTGTCCTGTGGCGGTCAGGCACTTaGTCAAGAGCAGCAGAGCCA +
Preference number: 2 (lower is better)
Translates to: SSPNKGPPSILCTLDSVLWRSGT*SRAAEP
Trigger: TGGCTCTGCTGCTCTTGACCAAGTGCCTGACCGCCA...CAGGACACTGTCCAAGGTGCACAAGATGCTGGGAGGTCCCTTGTTTGGTGAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR CCA 90 bp GCTAGGCTGTGTGGGTTTAGAAAAGTGGATTCTCGACCCAACACTGCCTGGGGAGCCCTGTGGCTTCCTTaGAAACCCCTTCCACTCGTG +
Preference number: 2 (lower is better)
Translates to: ARLCGFRKVDSRPNTAWGALWLP*KPLPLV
Trigger: CACGAGTGGAAGGGGTTTCCAAGGAAGCCACAGGGC...TCCCCAGGCAGTGTTGGGTCGAGAATCCACTTTTCTAAACCCACACAGCCTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR CCA 90 bp ACACACACACACACACACACATCACACACAATTTCTTTGAGGAGAATCATGGGGGGTGCCCGGCCTCAGTaGCAGGAGCCGTGTCCTCCC +
Preference number: 2 (lower is better)
Translates to: THTHTHTSHTISLRRIMGGARPQ*QEPCPP
Trigger: GGGAGGACACGGCTCCTGCCACTGAGGCCGGGCACC...CCCCATGATTCTCCTCAAAGAAATTGTGTGTGATGTGTGTGTGTGTGTGTGTGT
56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR GCA 90 bp AGGGAGTCTCCTCGCATAAGCCACAAAGACACGTGGCAAAAAGCTGACATCTTTCCCCCGAGGGCCGGCTaGCCCGTGTGGATGATAAAA +
Preference number: 2 (lower is better)
Translates to: RESPRISHKDTWQKADIFPPRAG*PVWMIK
Trigger: TTTTATCATCCACACGGGGCAGCCGGCCCTCGGGGG...AAAGATGTCAGCTTTTTGCCACGTGTCTTTGTGGCTTATGCGAGGAGACTCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR GCA 90 bp GGATTCTCGACCCAACACTGCCTGGGGAAATGGCTGTGGTTCTGCATGGAATGGGGCTTGCTACCTGGCTaGCATCGCGAGTACTTTTCA +
Preference number: 2 (lower is better)
Translates to: GFSTQHCLGKWLWFCMEWGLLPG*HREYFS
Trigger: TGAAAAGTACTCGCGATGGCAGCCAGGTAGCAAGCC...CCATTCCATGCAGAACCACAGCCATTTCCCCAGGCAGTGTTGGGTCGAGAATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR GCA 90 bp TCTTCACCAAACAAGGGACCTCCCAGCATCTTGTGCACCTTGGACAGTGTCCTGAAGCACGTGGTCAGCTaGCCTGTGGCTTCCTTGGAA +
Preference number: 2 (lower is better)
Translates to: SSPNKGPPSILCTLDSVLKHVVS*PVASLE
Trigger: TTCCAAGGAAGCCACAGGGCAGCTGACCACGTGCTT...CAGGACACTGTCCAAGGTGCACAAGATGCTGGGAGGTCCCTTGTTTGGTGAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR GCA 90 bp GCTAGGCTGTGTGGGTTTAGAAAAGTGGATTCTCGACCCAACACTGCCTGGGGAAAGCACGTGGTCAGCTaGCCTGTGGCTTCCTTGGAA +
Preference number: 2 (lower is better)
Translates to: ARLCGFRKVDSRPNTAWGKHVVS*PVASLE
Trigger: TTCCAAGGAAGCCACAGGGCAGCTGACCACGTGCTT...TCCCCAGGCAGTGTTGGGTCGAGAATCCACTTTTCTAAACCCACACAGCCTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR CCA 90 bp GCTAGGCTGTGTGGGTTTAGAAAAGTGGATTCTCGACCCAACACTGCCTGGGGACTGCGGTTTAGGGTCTaGTGTGTGGTACGAGACCCA +
Preference number: 2 (lower is better)
Translates to: ARLCGFRKVDSRPNTAWGLRFRV*CVVRDP
Trigger: TGGGTCTCGTACCACACACCAGACCCTAAACCGCAG...TCCCCAGGCAGTGTTGGGTCGAGAATCCACTTTTCTAAACCCACACAGCCTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR CCA 90 bp GCTAGGCTGTGTGGGTTTAGAAAAGTGGATTCTCGACCCAACACTGCCTGGGGACCAGGACACGGGATTTaGACTCCTGGGTCCTTCTCA +
Preference number: 2 (lower is better)
Translates to: ARLCGFRKVDSRPNTAWGPGHGI*TPGSFS
Trigger: TGAGAAGGACCCAGGAGTCCAAATCCCGTGTCCTGG...TCCCCAGGCAGTGTTGGGTCGAGAATCCACTTTTCTAAACCCACACAGCCTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR CCA 90 bp GCTAGGCTGTGTGGGTTTAGAAAAGTGGATTCTCGACCCAACACTGCCTGGGGAACACCCAAGATAACATaGGCTGGGGGCTGGGGAACA +
Preference number: 2 (lower is better)
Translates to: ARLCGFRKVDSRPNTAWGTPKIT*AGGWGT
Trigger: TGTTCCCCAGCCCCCAGCCCATGTTATCTTGGGTGT...TCCCCAGGCAGTGTTGGGTCGAGAATCCACTTTTCTAAACCCACACAGCCTAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR TCA 90 bp TCATGGGGTAGAAGCCAAGAATCCAACACAGATCATCTGGAATTTCAGAACACGCGGTTCCTGTGGGGCTaGCGGTGTCCAGGGAGGACA +
Preference number: 2 (lower is better)
Translates to: SWGRSQESNTDHLEFQNTRFLWG*RCPGRT
Trigger: TGTCCTCCCTGGACACCGTCAGCCCCACAGGAACCG...CGTGTTCTGAAATTCCAGATGATCTGTGTTGGATTCTTGGCTTCTACCCCATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR TCA 90 bp AGGGAGTCTCCTCGCATAAGCCACAAAGACACGTGGCAAAAAGCTGACATCTTTACCCATGCTGGATGCTaGGTCCCAGGACACGGGATT +
Preference number: 2 (lower is better)
Translates to: RESPRISHKDTWQKADIFTHAGC*VPGHGI
Trigger: AATCCCGTGTCCTGGGACTCAGCATCCAGCATGGGT...AAAGATGTCAGCTTTTTGCCACGTGTCTTTGTGGCTTATGCGAGGAGACTCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR TCA 90 bp GCTAGGCTGTGTGGGTTTAGAAAAGTGGATTCTCGACCCAACACTGCCTGGGGAATGACATCCACACACTaGACACACCTGTACAGGCAC +
Preference number: 2 (lower is better)
Translates to: ARLCGFRKVDSRPNTAWGMTSTH*THLYRH
Trigger: GTGCCTGTACAGGTGTGTTCAGTGTGTGGATGTCAT...TCCCCAGGCAGTGTTGGGTCGAGAATCCACTTTTCTAAACCCACACAGCCTAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR GCA 90 bp TCTTCACCAAACAAGGGACCTCCCAGCATCTTGTGCACCTTGGACAGTGTCCTGAGGACAGCAAATGGCTaGCTTGTTTGCCACCATGAC +
Preference number: 2 (lower is better)
Translates to: SSPNKGPPSILCTLDSVLRTANG*LVCHHD
Trigger: GTCATGGTGGCAAACAAGGCAGCCATTTGCTGTCCT...CAGGACACTGTCCAAGGTGCACAAGATGCTGGGAGGTCCCTTGTTTGGTGAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR GCA 90 bp GCTAGGCTGTGTGGGTTTAGAAAAGTGGATTCTCGACCCAACACTGCCTGGGGAAGGACAGCAAATGGCTaGCTTGTTTGCCACCATGAC +
Preference number: 2 (lower is better)
Translates to: ARLCGFRKVDSRPNTAWGRTANG*LVCHHD
Trigger: GTCATGGTGGCAAACAAGGCAGCCATTTGCTGTCCT...TCCCCAGGCAGTGTTGGGTCGAGAATCCACTTTTCTAAACCCACACAGCCTAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR TCA 90 bp TCACATGCACAGTCCGAGATTCCTGGTTTATTCTATTGGAATAAAATACTCTGTCCAGGAGCCTGGGTGTaGGGGCCTGGCGGTCAGGCA +
Preference number: 2 (lower is better)
Translates to: SHAQSEIPGLFYWNKILCPGAWV*GPGGQA
Trigger: TGCCTGACCGCCAGGCCCTCACACCCAGGCTCCTGG...ACAGAGTATTTTATTCCAATAGAATAAACCAGGAATCTCGGACTGTGCATGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR GCA 90 bp GGGGTAGAAGCCAAGAATCCAACACAGATCATCTGGAATTTCAGAACACGGAGGAAGCACGTGGTCAGCTaGCCTGTGGCTTCCTTGGAA +
Preference number: 2 (lower is better)
Translates to: GVEAKNPTQIIWNFRTRRKHVVS*PVASLE
Trigger: TTCCAAGGAAGCCACAGGGCAGCTGACCACGTGCTT...CCTCCGTGTTCTGAAATTCCAGATGATCTGTGTTGGATTCTTGGCTTCTACCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR GCA 90 bp CAGCAAACTAGTCAATCACAGAATTTCTTTTTAAGTAGGTCCCAGTTGTGTTGCGGGCTTCCTCCCTCCTaGCCTGACGGCCCCACATCC +
Preference number: 2 (lower is better)
Translates to: QQTSQSQNFFLSRSQLCCGLPPS*PDGPTS
Trigger: GGATGTGGGGCCGTCAGGGCAGGAGGGAGGAAGCCC...GCAACACAACTGGGACCTACTTAAAAAGAAATTCTGTGATTGACTAGTTTGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR GCA 90 bp CAGCAAACTAGTCAATCACAGAATTTCTTTTTAAGTAGGTCCCAGTTGTGTTGCCTGGCGCCAGGACAGTaGTGGGCATCAGGTGCCCGG +
Preference number: 2 (lower is better)
Translates to: QQTSQSQNFFLSRSQLCCLAPGQ*WASGAR
Trigger: CCGGGCACCTGATGCCCAGCACTGTCCTGGCGCCAG...GCAACACAACTGGGACCTACTTAAAAAGAAATTCTGTGATTGACTAGTTTGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR GCA 90 bp TCATGGGGTAGAAGCCAAGAATCCAACACAGATCATCTGGAATTTCAGAACACGCCTCACTTGACTGCCTaGTCCCTGTGTCTGGCGCCA +
Preference number: 2 (lower is better)
Translates to: SWGRSQESNTDHLEFQNTPHLTA*SLCLAP
Trigger: TGGCGCCAGACACAGGGAGCAGGCAGTCAAGTGAGG...CGTGTTCTGAAATTCCAGATGATCTGTGTTGGATTCTTGGCTTCTACCCCATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR CCA 90 bp GGGGTAGAAGCCAAGAATCCAACACAGATCATCTGGAATTTCAGAACACGGAGGTTAGGGTCTGGTGTGTaGTACGAGACCCAGGAAGGC +
Preference number: 2 (lower is better)
Translates to: GVEAKNPTQIIWNFRTRRLGSGV*YETQEG
Trigger: GCCTTCCTGGGTCTCGTACCACACACCAGACCCTAA...CCTCCGTGTTCTGAAATTCCAGATGATCTGTGTTGGATTCTTGGCTTCTACCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR CCA 90 bp GGGGTAGAAGCCAAGAATCCAACACAGATCATCTGGAATTTCAGAACACGGAGGTGGTCAGCTGCCCTGTaGCTTCCTTGGAAACCCCTT +
Preference number: 2 (lower is better)
Translates to: GVEAKNPTQIIWNFRTRRWSAAL*LPWKPL
Trigger: AAGGGGTTTCCAAGGAAGCCACAGGGCAGCTGACCA...CCTCCGTGTTCTGAAATTCCAGATGATCTGTGTTGGATTCTTGGCTTCTACCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR TCA 90 bp GCTAGGCTGTGTGGGTTTAGAAAAGTGGATTCTCGACCCAACACTGCCTGGGGACACGTGGCAAAAAGCTaGCATCTTTCTTTCACAGGT +
Preference number: 2 (lower is better)
Translates to: ARLCGFRKVDSRPNTAWGHVAKS*HLSFTG
Trigger: ACCTGTGAAAGAAAGATGTCAGCTTTTTGCCACGTG...TCCCCAGGCAGTGTTGGGTCGAGAATCCACTTTTCTAAACCCACACAGCCTAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR GCA 90 bp CAGCAAACTAGTCAATCACAGAATTTCTTTTTAAGTAGGTCCCAGTTGTGTTGCCGGCCACGTGAAGGGTaGTCCCCACAGGACGCAGAG +
Preference number: 2 (lower is better)
Translates to: QQTSQSQNFFLSRSQLCCRPREG*SPQDAE
Trigger: CTCTGCGTCCTGTGGGGAGCACCCTTCACGTGGCCG...GCAACACAACTGGGACCTACTTAAAAAGAAATTCTGTGATTGACTAGTTTGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR GCA 90 bp GCTAGGCTGTGTGGGTTTAGAAAAGTGGATTCTCGACCCAACACTGCCTGGGGAACATACCACAGAGTGTaGCCTGAGAATCATATGCAG +
Preference number: 2 (lower is better)
Translates to: ARLCGFRKVDSRPNTAWGTYHRV*PENHMQ
Trigger: CTGCATATGATTCTCAGGGCACACTCTGTGGTATGT...TCCCCAGGCAGTGTTGGGTCGAGAATCCACTTTTCTAAACCCACACAGCCTAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR GCA 90 bp TCACATGCACAGTCCGAGATTCCTGGTTTATTCTATTGGAATAAAATACTCTGTCTGGCGCCAGGACAGTaGTGGGCATCAGGTGCCCGG +
Preference number: 2 (lower is better)
Translates to: SHAQSEIPGLFYWNKILCLAPGQ*WASGAR
Trigger: CCGGGCACCTGATGCCCAGCACTGTCCTGGCGCCAG...ACAGAGTATTTTATTCCAATAGAATAAACCAGGAATCTCGGACTGTGCATGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR CCA 90 bp GAAAATGCCTCACACAAGCACGTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCAGCCACAAAGACACGTaGCAAAAAGCTGACATCTTT +
Preference number: 2 (lower is better)
Translates to: ENASHKHVVSCPVASLETSHKDT*QKADIF
Trigger: AAAGATGTCAGCTTTTTGCCACGTGTCTTTGTGGCT...GGTTTCCAAGGAAGCCACAGGGCAGCTGACCACGTGCTTGTGTGAGGCATTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR TCA 90 bp TCTTCACCAAACAAGGGACCTCCCAGCATCTTGTGCACCTTGGACAGTGTCCTGATATGCAGAACAGACTaGAAATGCCTCACACAAGCA +
Preference number: 2 (lower is better)
Translates to: SSPNKGPPSILCTLDSVLICRTD*KCLTQA
Trigger: TGCTTGTGTGAGGCATTTTCAGTCTGTTCTGCATAT...CAGGACACTGTCCAAGGTGCACAAGATGCTGGGAGGTCCCTTGTTTGGTGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR GCA 90 bp ACACACACACACACACACACATCACACACAATTTCTTTGAGGAGAATCATGGGGCTTTTCACAGCATCCTaGGGTGATGGATCCCGAGGC +
Preference number: 2 (lower is better)
Translates to: THTHTHTSHTISLRRIMGLFTAS*GDGSRG
Trigger: GCCTCGGGATCCATCACCGCAGGATGCTGTGAAAAG...CCCCATGATTCTCCTCAAAGAAATTGTGTGTGATGTGTGTGTGTGTGTGTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR GCA 90 bp CAGCAAACTAGTCAATCACAGAATTTCTTTTTAAGTAGGTCCCAGTTGTGTTGCCCACTGGCAAGGGCTTaGTACCTGGCTGCCATCGCG +
Preference number: 2 (lower is better)
Translates to: QQTSQSQNFFLSRSQLCCPLARA*YLAAIA
Trigger: CGCGATGGCAGCCAGGTAGCAAGCCCTTGCCAGTGG...GCAACACAACTGGGACCTACTTAAAAAGAAATTCTGTGATTGACTAGTTTGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR CCA 90 bp ACACACACACACACACACACATCACACACAATTTCTTTGAGGAGAATCATGGGGTCCAAGCACCCATGCTaGATGCTGAGTCCCAGGACA +
Preference number: 2 (lower is better)
Translates to: THTHTHTSHTISLRRIMGSKHPC*MLSPRT
Trigger: TGTCCTGGGACTCAGCATCCAGCATGGGTGCTTGGA...CCCCATGATTCTCCTCAAAGAAATTGTGTGTGATGTGTGTGTGTGTGTGTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR CCA 90 bp CAGCAAACTAGTCAATCACAGAATTTCTTTTTAAGTAGGTCCCAGTTGTGTTGCCCGTCTACGTCCACCTaGACCGGACAGGGCTGCACA +
Preference number: 2 (lower is better)
Translates to: QQTSQSQNFFLSRSQLCCPSTST*TGQGCT
Trigger: TGTGCAGCCCTGTCCGGTCCAGGTGGACGTAGACGG...GCAACACAACTGGGACCTACTTAAAAAGAAATTCTGTGATTGACTAGTTTGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR TCA 90 bp CAGCAAACTAGTCAATCACAGAATTTCTTTTTAAGTAGGTCCCAGTTGTGTTGCGGGTCAGACCTCACTTaGCTGCCTGCTCCCTGTGTC +
Preference number: 2 (lower is better)
Translates to: QQTSQSQNFFLSRSQLCCGSDLT*LPAPCV
Trigger: GACACAGGGAGCAGGCAGTCAAGTGAGGTCTGACCC...GCAACACAACTGGGACCTACTTAAAAAGAAATTCTGTGATTGACTAGTTTGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR GCA 90 bp CAGCAAACTAGTCAATCACAGAATTTCTTTTTAAGTAGGTCCCAGTTGTGTTGCCCTCACTTGACTGCCTaGTCCCTGTGTCTGGCGCCA +
Preference number: 2 (lower is better)
Translates to: QQTSQSQNFFLSRSQLCCPHLTA*SLCLAP
Trigger: TGGCGCCAGACACAGGGAGCAGGCAGTCAAGTGAGG...GCAACACAACTGGGACCTACTTAAAAAGAAATTCTGTGATTGACTAGTTTGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR GCA 90 bp GCTAGGCTGTGTGGGTTTAGAAAAGTGGATTCTCGACCCAACACTGCCTGGGGAATCAACTGCTCTAAATaGTCCCTTTCTTCACCAAAC +
Preference number: 2 (lower is better)
Translates to: ARLCGFRKVDSRPNTAWGINCSK*SLSSPN
Trigger: GTTTGGTGAAGAAAGGGAGCATTTAGAGCAGTTGAT...TCCCCAGGCAGTGTTGGGTCGAGAATCCACTTTTCTAAACCCACACAGCCTAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR GCA 90 bp GCTAGGCTGTGTGGGTTTAGAAAAGTGGATTCTCGACCCAACACTGCCTGGGGAAGTTTCAGAGTGTTGTaGCTTCAGGTAAGGAAATTC +
Preference number: 2 (lower is better)
Translates to: ARLCGFRKVDSRPNTAWGSFRVL*LQVRKF
Trigger: GAATTTCCTTACCTGAAGGCACAACACTCTGAAACT...TCCCCAGGCAGTGTTGGGTCGAGAATCCACTTTTCTAAACCCACACAGCCTAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR GCA 90 bp ACACACACACACACACACACATCACACACAATTTCTTTGAGGAGAATCATGGGGAATGGCTGCCTTGTTTaGCACCATGACATCCAGTGC +
Preference number: 2 (lower is better)
Translates to: THTHTHTSHTISLRRIMGNGCLV*HHDIQC
Trigger: GCACTGGATGTCATGGTGGCAAACAAGGCAGCCATT...CCCCATGATTCTCCTCAAAGAAATTGTGTGTGATGTGTGTGTGTGTGTGTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR GCA 90 bp CAGCAAACTAGTCAATCACAGAATTTCTTTTTAAGTAGGTCCCAGTTGTGTTGCCAGACCTCACTTGACTaGCTGCTCCCTGTGTCTGGC +
Preference number: 2 (lower is better)
Translates to: QQTSQSQNFFLSRSQLCCQTSLD*LLPVSG
Trigger: GCCAGACACAGGGAGCAGGCAGTCAAGTGAGGTCTG...GCAACACAACTGGGACCTACTTAAAAAGAAATTCTGTGATTGACTAGTTTGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR GCA 90 bp GGATTCTCGACCCAACACTGCCTGGGGAAATGGCTGTGGTTCTGCATGGAATGGAAATGTGTCTTTTGTTaGATAGCCCTATGGGTTAAT +
Preference number: 2 (lower is better)
Translates to: GFSTQHCLGKWLWFCMEWKCVFC*IALWVN
Trigger: ATTAACCCATAGGGCTATGCAACAAAAGACACATTT...CCATTCCATGCAGAACCACAGCCATTTCCCCAGGCAGTGTTGGGTCGAGAATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR CCA 90 bp CAGCAAACTAGTCAATCACAGAATTTCTTTTTAAGTAGGTCCCAGTTGTGTTGCGCCGGCTGCCCCGTGTaGATGATAAAACTCATCCAC +
Preference number: 2 (lower is better)
Translates to: QQTSQSQNFFLSRSQLCCAGCPV*MIKLIH
Trigger: GTGGATGAGTTTTATCATCCACACGGGGCAGCCGGC...GCAACACAACTGGGACCTACTTAAAAAGAAATTCTGTGATTGACTAGTTTGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR CCA 90 bp CAGCAAACTAGTCAATCACAGAATTTCTTTTTAAGTAGGTCCCAGTTGTGTTGCTTAGGGTCTGGTGTGTaGTACGAGACCCAGGAAGGC +
Preference number: 2 (lower is better)
Translates to: QQTSQSQNFFLSRSQLCCLGSGV*YETQEG
Trigger: GCCTTCCTGGGTCTCGTACCACACACCAGACCCTAA...GCAACACAACTGGGACCTACTTAAAAAGAAATTCTGTGATTGACTAGTTTGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR CCA 90 bp CAGCAAACTAGTCAATCACAGAATTTCTTTTTAAGTAGGTCCCAGTTGTGTTGCCTGCGGTTTAGGGTCTaGTGTGTGGTACGAGACCCA +
Preference number: 2 (lower is better)
Translates to: QQTSQSQNFFLSRSQLCCLRFRV*CVVRDP
Trigger: TGGGTCTCGTACCACACACCAGACCCTAAACCGCAG...GCAACACAACTGGGACCTACTTAAAAAGAAATTCTGTGATTGACTAGTTTGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR CCA 90 bp CAGCAAACTAGTCAATCACAGAATTTCTTTTTAAGTAGGTCCCAGTTGTGTTGCCGGGATTTGGACTCCTaGGTCCTTCTCAGCCACACA +
Preference number: 2 (lower is better)
Translates to: QQTSQSQNFFLSRSQLCCRDLDS*VLLSHT
Trigger: TGTGTGGCTGAGAAGGACCCAGGAGTCCAAATCCCG...GCAACACAACTGGGACCTACTTAAAAAGAAATTCTGTGATTGACTAGTTTGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR CAA 90 bp GAACAAGAGACAAAACGTCAGTGTCAAAATACACATCCTTCTACTTaGCAACAGGAGCACAGTGATCACATGCACAGTCCGAGATTCCTG +
Preference number: 2 (lower is better)
Translates to: EQETKRQCQNTHPST*QQEHSDHMHSPRFL
Trigger: CAGGAATCTCGGACTGTGCATGTGATCACTGTGCTCCTGTTGCAAAGTAGAAGGATGTGTATTTTGACACTGACGTTTTGTCTCTTGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR TCA 90 bp TCACATGCACAGTCCGAGATTCCTGGTTTATTCTATTGGAATAAAATACTCTGTCTCGGTCACTTGCTCTaGGTTTCATTCCAGCTGGGG +
Preference number: 2 (lower is better)
Translates to: SHAQSEIPGLFYWNKILCLGHLL*VSFQLG
Trigger: CCCCAGCTGGAATGAAACTCAGAGCAAGTGACCGAG...ACAGAGTATTTTATTCCAATAGAATAAACCAGGAATCTCGGACTGTGCATGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR GCA 90 bp CAGCAAACTAGTCAATCACAGAATTTCTTTTTAAGTAGGTCCCAGTTGTGTTGCGGCTTGCTACCTGGCTaGCATCGCGAGTACTTTTCA +
Preference number: 2 (lower is better)
Translates to: QQTSQSQNFFLSRSQLCCGLLPG*HREYFS
Trigger: TGAAAAGTACTCGCGATGGCAGCCAGGTAGCAAGCC...GCAACACAACTGGGACCTACTTAAAAAGAAATTCTGTGATTGACTAGTTTGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR GCA 90 bp ACACACACACACACACACACATCACACACAATTTCTTTGAGGAGAATCATGGGGCACACCACCATCAACTaGTCTAAATGCTCCCTTTCT +
Preference number: 2 (lower is better)
Translates to: THTHTHTSHTISLRRIMGHTTIN*SKCSLS
Trigger: AGAAAGGGAGCATTTAGAGCAGTTGATGGTGGTGTG...CCCCATGATTCTCCTCAAAGAAATTGTGTGTGATGTGTGTGTGTGTGTGTGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR GCA 90 bp CAGCAAACTAGTCAATCACAGAATTTCTTTTTAAGTAGGTCCCAGTTGTGTTGCCACCTGTACAGGCACTaGATCTCCTGTGACACAGAC +
Preference number: 2 (lower is better)
Translates to: QQTSQSQNFFLSRSQLCCHLYRH*ISCDTD
Trigger: GTCTGTGTCACAGGAGATGCAGTGCCTGTACAGGTG...GCAACACAACTGGGACCTACTTAAAAAGAAATTCTGTGATTGACTAGTTTGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR CCA 90 bp TCACATGCACAGTCCGAGATTCCTGGTTTATTCTATTGGAATAAAATACTCTGTCCAGGACACGGGATTTaGACTCCTGGGTCCTTCTCA +
Preference number: 2 (lower is better)
Translates to: SHAQSEIPGLFYWNKILCPGHGI*TPGSFS
Trigger: TGAGAAGGACCCAGGAGTCCAAATCCCGTGTCCTGG...ACAGAGTATTTTATTCCAATAGAATAAACCAGGAATCTCGGACTGTGCATGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR CCA 90 bp TCACATGCACAGTCCGAGATTCCTGGTTTATTCTATTGGAATAAAATACTCTGTTGGTCAGCTGCCCTGTaGCTTCCTTGGAAACCCCTT +
Preference number: 2 (lower is better)
Translates to: SHAQSEIPGLFYWNKILCWSAAL*LPWKPL
Trigger: AAGGGGTTTCCAAGGAAGCCACAGGGCAGCTGACCA...ACAGAGTATTTTATTCCAATAGAATAAACCAGGAATCTCGGACTGTGCATGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR TCA 90 bp TCACATGCACAGTCCGAGATTCCTGGTTTATTCTATTGGAATAAAATACTCTGTCCTTGTTTGCCACCATaGCATCCAGTGCTCTCCACT +
Preference number: 2 (lower is better)
Translates to: SHAQSEIPGLFYWNKILCPCLPP*HPVLST
Trigger: AGTGGAGAGCACTGGATGTCATGGTGGCAAACAAGG...ACAGAGTATTTTATTCCAATAGAATAAACCAGGAATCTCGGACTGTGCATGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR GCA 90 bp CAGCAAACTAGTCAATCACAGAATTTCTTTTTAAGTAGGTCCCAGTTGTGTTGCAATGGCTGCCTTGTTTaGCACCATGACATCCAGTGC +
Preference number: 2 (lower is better)
Translates to: QQTSQSQNFFLSRSQLCCNGCLV*HHDIQC
Trigger: GCACTGGATGTCATGGTGGCAAACAAGGCAGCCATT...GCAACACAACTGGGACCTACTTAAAAAGAAATTCTGTGATTGACTAGTTTGCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR GCA 90 bp CAGCAAACTAGTCAATCACAGAATTTCTTTTTAAGTAGGTCCCAGTTGTGTTGCAGGACAGCAAATGGCTaGCTTGTTTGCCACCATGAC +
Preference number: 2 (lower is better)
Translates to: QQTSQSQNFFLSRSQLCCRTANG*LVCHHD
Trigger: GTCATGGTGGCAAACAAGGCAGCCATTTGCTGTCCT...GCAACACAACTGGGACCTACTTAAAAAGAAATTCTGTGATTGACTAGTTTGCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR GCA 90 bp TCACATGCACAGTCCGAGATTCCTGGTTTATTCTATTGGAATAAAATACTCTGTCACCTGTACAGGCACTaGATCTCCTGTGACACAGAC +
Preference number: 2 (lower is better)
Translates to: SHAQSEIPGLFYWNKILCHLYRH*ISCDTD
Trigger: GTCTGTGTCACAGGAGATGCAGTGCCTGTACAGGTG...ACAGAGTATTTTATTCCAATAGAATAAACCAGGAATCTCGGACTGTGCATGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR CCA 90 bp TCATGGGGTAGAAGCCAAGAATCCAACACAGATCATCTGGAATTTCAGAACACGAGCCACAAAGACACGTaGCAAAAAGCTGACATCTTT +
Preference number: 2 (lower is better)
Translates to: SWGRSQESNTDHLEFQNTSHKDT*QKADIF
Trigger: AAAGATGTCAGCTTTTTGCCACGTGTCTTTGTGGCT...CGTGTTCTGAAATTCCAGATGATCTGTGTTGGATTCTTGGCTTCTACCCCATGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR GCA 90 bp CAGCAAACTAGTCAATCACAGAATTTCTTTTTAAGTAGGTCCCAGTTGTGTTGCAAATGGCTGTGGTTCTaGATGGAATGGACACATTCG +
Preference number: 2 (lower is better)
Translates to: QQTSQSQNFFLSRSQLCCKWLWF*MEWTHS
Trigger: CGAATGTGTCCATTCCATGCAGAACCACAGCCATTT...GCAACACAACTGGGACCTACTTAAAAAGAAATTCTGTGATTGACTAGTTTGCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR GCA 90 bp TCACATGCACAGTCCGAGATTCCTGGTTTATTCTATTGGAATAAAATACTCTGTCACACCACCATCAACTaGTCTAAATGCTCCCTTTCT +
Preference number: 2 (lower is better)
Translates to: SHAQSEIPGLFYWNKILCHTTIN*SKCSLS
Trigger: AGAAAGGGAGCATTTAGAGCAGTTGATGGTGGTGTG...ACAGAGTATTTTATTCCAATAGAATAAACCAGGAATCTCGGACTGTGCATGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR CCA 90 bp CAGCAAACTAGTCAATCACAGAATTTCTTTTTAAGTAGGTCCCAGTTGTGTTGCTGTTGCATAGCCCTATaGGTTAATGACATCCACACA +
Preference number: 2 (lower is better)
Translates to: QQTSQSQNFFLSRSQLCCCCIAL*VNDIHT
Trigger: TGTGTGGATGTCATTAACCCATAGGGCTATGCAACA...GCAACACAACTGGGACCTACTTAAAAAGAAATTCTGTGATTGACTAGTTTGCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR TCA 90 bp TCACATGCACAGTCCGAGATTCCTGGTTTATTCTATTGGAATAAAATACTCTGTATATGCAGAACAGACTaGAAATGCCTCACACAAGCA +
Preference number: 2 (lower is better)
Translates to: SHAQSEIPGLFYWNKILCICRTD*KCLTQA
Trigger: TGCTTGTGTGAGGCATTTTCAGTCTGTTCTGCATAT...ACAGAGTATTTTATTCCAATAGAATAAACCAGGAATCTCGGACTGTGCATGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR GCA 90 bp CAGCAAACTAGTCAATCACAGAATTTCTTTTTAAGTAGGTCCCAGTTGTGTTGCATCAACTGCTCTAAATaGTCCCTTTCTTCACCAAAC +
Preference number: 2 (lower is better)
Translates to: QQTSQSQNFFLSRSQLCCINCSK*SLSSPN
Trigger: GTTTGGTGAAGAAAGGGAGCATTTAGAGCAGTTGAT...GCAACACAACTGGGACCTACTTAAAAAGAAATTCTGTGATTGACTAGTTTGCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR CCA 90 bp CAGCAAACTAGTCAATCACAGAATTTCTTTTTAAGTAGGTCCCAGTTGTGTTGCGATGCACTTCAAATTTaGCAGCTCACTATGAGATTC +
Preference number: 2 (lower is better)
Translates to: QQTSQSQNFFLSRSQLCCDALQI*QLTMRF
Trigger: GAATCTCATAGTGAGCTGCCAAATTTGAAGTGCATC...GCAACACAACTGGGACCTACTTAAAAAGAAATTCTGTGATTGACTAGTTTGCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR GCA 90 bp TCACATGCACAGTCCGAGATTCCTGGTTTATTCTATTGGAATAAAATACTCTGTAAATGTGTCTTTTGTTaGATAGCCCTATGGGTTAAT +
Preference number: 2 (lower is better)
Translates to: SHAQSEIPGLFYWNKILCKCVFC*IALWVN
Trigger: ATTAACCCATAGGGCTATGCAACAAAAGACACATTT...ACAGAGTATTTTATTCCAATAGAATAAACCAGGAATCTCGGACTGTGCATGTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR CAA 90 bp TGGCGCCAGGACAGTGCTGGGCATCAGGTGCCCGGCCTCAGTGGCAGGAGCCGTTCCACTGGCAAGGGCTaGCTACCTGGCTGCCATCGC +
Preference number: 3 (lower is better)
Translates to: WRQDSAGHQVPGLSGRSRSTGKG*LPGCHR
Trigger: GCGATGGCAGCCAGGTAGCAAGCCCTTGCCAGTGGA...ACGGCTCCTGCCACTGAGGCCGGGCACCTGATGCCCAGCACTGTCCTGGCGCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR TCA 72 bp GGTGGTGGTAGCTGTGCCGTGCTCGGCCACCCGAGCTaGGTCCCAGGGTGCAGTGGTAACCGTTGGGCACGC +
Preference number: 3 (lower is better)
Translates to: GGGSCAVLGHPS*VPGCSGNRWAR
Trigger: GCGTGCCCAACGGTTACCACTGCACCCTGGGACTCAGCTCGGGTGGCCGAGCACGGCACAGCTACCACCACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
3UTR GCA 72 bp CCGTCCCGAGGTCTCGGCGCACTTTCAGGTGGGCCCTaGTTCTCTGTGCCGCACGGCCACGTGAAGGGTGCT +
Preference number: 3 (lower is better)
Translates to: PSRGLGALSGGP*FSVPHGHVKGA
Trigger: AGCACCCTTCACGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTCGGGACGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR CAA 90 bp TGGCGCCAGGACAGTGCTGGGCATCAGGTGCCCGGCCTCAGTGGCAGGAGCCGTCCCAGGACACGGGATTaGGACTCCTGGGTCCTTCTC +
Preference number: 3 (lower is better)
Translates to: WRQDSAGHQVPGLSGRSRPRTRD*DSWVLL
Trigger: GAGAAGGACCCAGGAGTCCAAATCCCGTGTCCTGGG...ACGGCTCCTGCCACTGAGGCCGGGCACCTGATGCCCAGCACTGTCCTGGCGCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR TCA 72 bp CCTCGCCTCACACCACAGTGCCCAGGAGCCTGGGTGTaGGGGCCTGGCGGTCAGGCACTTGGTCAAGAGCAG +
Preference number: 3 (lower is better)
Translates to: PRLTPQCPGAWV*GPGGQALGQEQ
Trigger: CTGCTCTTGACCAAGTGCCTGACCGCCAGGCCCTCACACCCAGGCTCCTGGGCACTGTGGTGTGAGGCGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR GCA 72 bp CCAGTGGTCTTGGTCAGGGTGGTGGTAGCTGTGCCGTaGTCGGCCACCCGAGCTGAGTCCCAGGGTGCAGTG +
Preference number: 3 (lower is better)
Translates to: PVVLVRVVVAVP*SATRAESQGAV
Trigger: CACTGCACCCTGGGACTCAGCTCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGACCAAGACCACTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
3UTR GCA 72 bp GCCCTGCTTCTCTGTGCCGCACGGCCACGTGAAGGGTaGTCCCCACAGGACGCAGAGCTCCTCACAACGGCT +
Preference number: 3 (lower is better)
Translates to: ALLLCAARPREG*SPQDAELLTTA
Trigger: AGCCGTTGTGAGGAGCTCTGCGTCCTGTGGGGAGCACCCTTCACGTGGCCGTGCGGCACAGAGAAGCAGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR GCA 72 bp TTGACTGCCTGCTCCCTGTGTCTGGCGCCAGGACAGTaGTGGGCATCAGGTGCCCGGCCTCAGTGGCAGGAG +
Preference number: 3 (lower is better)
Translates to: LTACSLCLAPGQ*WASGARPQWQE
Trigger: CTCCTGCCACTGAGGCCGGGCACCTGATGCCCAGCACTGTCCTGGCGCCAGACACAGGGAGCAGGCAGTCAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR CCA 72 bp ATCCCCTCCGTCCCGAGGTCTCGGCGCACTTTCAGGTaGGCCCTGCTTCTCTGTGCCGCACGGCCACGTGAA +
Preference number: 3 (lower is better)
Translates to: IPSVPRSRRTFR*ALLLCAARPRE
Trigger: TTCACGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTCGGGACGGAGGGGAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR CCA 72 bp CCAGGACAGTGCTGGGCATCAGGTGCCCGGCCTCAGTaGCAGGAGCCGTGTCCTCCCTCGGTCACTTGCTCT +
Preference number: 3 (lower is better)
Translates to: PGQCWASGARPQ*QEPCPPSVTCS
Trigger: AGAGCAAGTGACCGAGGGAGGACACGGCTCCTGCCACTGAGGCCGGGCACCTGATGCCCAGCACTGTCCTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR GCA 72 bp GCTTGCCTGAGTGAGCATTCGCTGACACTGGCGGGCTaGACAAGCCACGACTGTGTCCCCCTCCCCATCCCC +
Preference number: 3 (lower is better)
Translates to: ACLSEHSLTLAG*TSHDCVPLPIP
Trigger: GGGGATGGGGAGGGGGACACAGTCGTGGCTTGTGCAGCCCGCCAGTGTCAGCGAATGCTCACTCAGGCAAGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR TCA 72 bp GTGGCAGGAGCCGTGTCCTCCCTCGGTCACTTGCTCTaGGTTTCATTCCAGCTGGGGCTTCCTCCCTCCTGC +
Preference number: 3 (lower is better)
Translates to: VAGAVSSLGHLL*VSFQLGLPPSC
Trigger: GCAGGAGGGAGGAAGCCCCAGCTGGAATGAAACTCAGAGCAAGTGACCGAGGGAGGACACGGCTCCTGCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR GCA 72 bp TCACCAAGGTGGGCAAGGCCTCCCCCGAGGGCCGGCTaGCCCGTGTGGATGATAAAACTCATCCACTGGAAC +
Preference number: 3 (lower is better)
Translates to: SPRWARPPPRAG*PVWMIKLIHWN
Trigger: GTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTCGGGGGAGGCCTTGCCCACCTTGGTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR CAA 90 bp GCTTGCCTGAGTGAGCATTCGCTGACACTGGCGGGCTGCACAAGCCACGACTGTCCCAGGACACGGGATTaGGACTCCTGGGTCCTTCTC +
Preference number: 3 (lower is better)
Translates to: ACLSEHSLTLAGCTSHDCPRTRD*DSWVLL
Trigger: GAGAAGGACCCAGGAGTCCAAATCCCGTGTCCTGGG...ACAGTCGTGGCTTGTGCAGCCCGCCAGTGTCAGCGAATGCTCACTCAGGCAAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR TCA 72 bp CTCCTCACAACGGCTCCAAGCACCCATGCTGGATGCTaGGTCCCAGGACACGGGATTTGGACTCCTGGGTCC +
Preference number: 3 (lower is better)
Translates to: LLTTAPSTHAGC*VPGHGIWTPGS
Trigger: GGACCCAGGAGTCCAAATCCCGTGTCCTGGGACTCAGCATCCAGCATGGGTGCTTGGAGCCGTTGTGAGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR TCA 72 bp GCTGCCATCGCGAGTACTTTTCACAGCATCCTGCGGTaGTGGATCCCGAGGCCTCGCCTCACACCACAGTGC +
Preference number: 3 (lower is better)
Translates to: AAIASTFHSILR*WIPRPRLTPQC
Trigger: GCACTGTGGTGTGAGGCGAGGCCTCGGGATCCATCACCGCAGGATGCTGTGAAAAGTACTCGCGATGGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR GCA 72 bp ACCTGGCTGCCATCGCGAGTACTTTTCACAGCATCCTaGGGTGATGGATCCCGAGGCCTCGCCTCACACCAC +
Preference number: 3 (lower is better)
Translates to: TWLPSRVLFTAS*GDGSRGLASHH
Trigger: GTGGTGTGAGGCGAGGCCTCGGGATCCATCACCGCAGGATGCTGTGAAAAGTACTCGCGATGGCAGCCAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR CCA 72 bp CCACACACAGCAGCCTGCGGTTTAGGGTCTGGTGTGTaGTACGAGACCCAGGAAGGCAGGACAGGAAGGGGA +
Preference number: 3 (lower is better)
Translates to: PHTAACGLGSGV*YETQEGRTGRG
Trigger: TCCCCTTCCTGTCCTGCCTTCCTGGGTCTCGTACCACACACCAGACCCTAAACCGCAGGCTGCTGTGTGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR CCA 72 bp CGCAGAGCTCCTCACAACGGCTCCAAGCACCCATGCTaGATGCTGAGTCCCAGGACACGGGATTTGGACTCC +
Preference number: 3 (lower is better)
Translates to: RRAPHNGSKHPC*MLSPRTRDLDS
Trigger: GGAGTCCAAATCCCGTGTCCTGGGACTCAGCATCCAGCATGGGTGCTTGGAGCCGTTGTGAGGAGCTCTGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR GCA 72 bp CCAGTGCTCTCCACTGGCAAGGGCTTGCTACCTGGCTaGCATCGCGAGTACTTTTCACAGCATCCTGCGGTG +
Preference number: 3 (lower is better)
Translates to: PVLSTGKGLLPG*HREYFSQHPAV
Trigger: CACCGCAGGATGCTGTGAAAAGTACTCGCGATGGCAGCCAGGTAGCAAGCCCTTGCCAGTGGAGAGCACTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR CCA 72 bp TTCTCAGCCACACACAGCAGCCTGCGGTTTAGGGTCTaGTGTGTGGTACGAGACCCAGGAAGGCAGGACAGG +
Preference number: 3 (lower is better)
Translates to: FSATHSSLRFRV*CVVRDPGRQDR
Trigger: CCTGTCCTGCCTTCCTGGGTCTCGTACCACACACCAGACCCTAAACCGCAGGCTGCTGTGTGTGGCTGAGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR CCA 72 bp TGGATGCTGAGTCCCAGGACACGGGATTTGGACTCCTaGGTCCTTCTCAGCCACACACAGCAGCCTGCGGTT +
Preference number: 3 (lower is better)
Translates to: WMLSPRTRDLDS*VLLSHTQQPAV
Trigger: AACCGCAGGCTGCTGTGTGTGGCTGAGAAGGACCCAGGAGTCCAAATCCCGTGTCCTGGGACTCAGCATCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR CCA 72 bp CACACAAGCACGTGGTCAGCTGCCCTGTGGCTTCCTTaGAAACCCCTTCCACTCGTGGGAGGAGGACAGCAA +
Preference number: 3 (lower is better)
Translates to: HTSTWSAALWLP*KPLPLVGGGQQ
Trigger: TTGCTGTCCTCCTCCCACGAGTGGAAGGGGTTTCCAAGGAAGCCACAGGGCAGCTGACCACGTGCTTGTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR CAA 90 bp CTCGTGGGAGGAGGACAGCAAATGGCTGCCTTGTTTGCCACCATGACATCCAGTCCCAGGACACGGGATTaGGACTCCTGGGTCCTTCTC +
Preference number: 3 (lower is better)
Translates to: LVGGGQQMAALFATMTSSPRTRD*DSWVLL
Trigger: GAGAAGGACCCAGGAGTCCAAATCCCGTGTCCTGGG...ACTGGATGTCATGGTGGCAAACAAGGCAGCCATTTGCTGTCCTCCTCCCACGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR GCA 72 bp GATAAAACTCATCCACTGGAACACACGCCTGCTGCATaGAGGCGTCTGAGCGGTCACGGTGCAGCTAGCACC +
Preference number: 3 (lower is better)
Translates to: DKTHPLEHTPAA*RRLSGHGAAST
Trigger: GGTGCTAGCTGCACCGTGACCGCTCAGACGCCTGCATGCAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
3UTR GCA 72 bp GCAAATGGCTGCCTTGTTTGCCACCATGACATCCAGTaGTCTCCACTGGCAAGGGCTTGCTACCTGGCTGCC +
Preference number: 3 (lower is better)
Translates to: ANGCLVCHHDIQ*SPLARACYLAA
Trigger: GGCAGCCAGGTAGCAAGCCCTTGCCAGTGGAGAGCACTGGATGTCATGGTGGCAAACAAGGCAGCCATTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR GCA 72 bp CACCATGACATCCAGTGCTCTCCACTGGCAAGGGCTTaGTACCTGGCTGCCATCGCGAGTACTTTTCACAGC +
Preference number: 3 (lower is better)
Translates to: HHDIQCSPLARA*YLAAIASTFHS
Trigger: GCTGTGAAAAGTACTCGCGATGGCAGCCAGGTAGCAAGCCCTTGCCAGTGGAGAGCACTGGATGTCATGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR GCA 72 bp ACTCGTGGGAGGAGGACAGCAAATGGCTGCCTTGTTTaGCACCATGACATCCAGTGCTCTCCACTGGCAAGG +
Preference number: 3 (lower is better)
Translates to: TRGRRTANGCLV*HHDIQCSPLAR
Trigger: CCTTGCCAGTGGAGAGCACTGGATGTCATGGTGGCAAACAAGGCAGCCATTTGCTGTCCTCCTCCCACGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR CCA 72 bp AAAATGCCTCACACAAGCACGTGGTCAGCTGCCCTGTaGCTTCCTTGGAAACCCCTTCCACTCGTGGGAGGA +
Preference number: 3 (lower is better)
Translates to: KMPHTSTWSAAL*LPWKPLPLVGG
Trigger: TCCTCCCACGAGTGGAAGGGGTTTCCAAGGAAGCCACAGGGCAGCTGACCACGTGCTTGTGTGAGGCATTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR CAA 90 bp GCTAGGCTGTGTGGGTTTAGAAAAGTGGATTCTCGACCCAACACTGCCTGGGGAGGACCTCCCAGCATCTaGTGCACCTTGGACAGTGTC +
Preference number: 3 (lower is better)
Translates to: ARLCGFRKVDSRPNTAWGGPPSI*CTLDSV
Trigger: GACACTGTCCAAGGTGCACAAGATGCTGGGAGGTCC...TCCCCAGGCAGTGTTGGGTCGAGAATCCACTTTTCTAAACCCACACAGCCTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR TCA 72 bp GAGGAGGACAGCAAATGGCTGCCTTGTTTGCCACCATaGCATCCAGTGCTCTCCACTGGCAAGGGCTTGCTA +
Preference number: 3 (lower is better)
Translates to: EEDSKWLPCLPP*HPVLSTGKGLL
Trigger: TAGCAAGCCCTTGCCAGTGGAGAGCACTGGATGTCATGGTGGCAAACAAGGCAGCCATTTGCTGTCCTCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR GCA 72 bp CAGACTGAAAATGCCTCACACAAGCACGTGGTCAGCTaGCCTGTGGCTTCCTTGGAAACCCCTTCCACTCGT +
Preference number: 3 (lower is better)
Translates to: QTENASHKHVVS*PVASLETPSTR
Trigger: ACGAGTGGAAGGGGTTTCCAAGGAAGCCACAGGGCAGCTGACCACGTGCTTGTGTGAGGCATTTTCAGTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR CCA 72 bp CACTGCCTGGGGAAATGGCTGTGGTTCTGCATGGAATaGACACATTCGACACCCAAGATAACATGGGCTGGG +
Preference number: 3 (lower is better)
Translates to: HCLGKWLWFCME*THSTPKITWAG
Trigger: CCCAGCCCATGTTATCTTGGGTGTCGAATGTGTCCATTCCATGCAGAACCACAGCCATTTCCCCAGGCAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR CAA 90 bp GCTAGGCTGTGTGGGTTTAGAAAAGTGGATTCTCGACCCAACACTGCCTGGGGACAGCAAATGGCTGCCTaGTTTGCCACCATGACATCC +
Preference number: 3 (lower is better)
Translates to: ARLCGFRKVDSRPNTAWGQQMAA*FATMTS
Trigger: GGATGTCATGGTGGCAAACAAGGCAGCCATTTGCTG...TCCCCAGGCAGTGTTGGGTCGAGAATCCACTTTTCTAAACCCACACAGCCTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR GCA 72 bp GAACACGGAGGACACACCACCATCAACTGCTCTAAATaGTCCCTTTCTTCACCAAACAAGGGACCTCCCAGC +
Preference number: 3 (lower is better)
Translates to: EHGGHTTINCSK*SLSSPNKGPPS
Trigger: GCTGGGAGGTCCCTTGTTTGGTGAAGAAAGGGAGCATTTAGAGCAGTTGATGGTGGTGTGTCCTCCGTGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR CAA 90 bp ACACACACACACACACACACATCACACACAATTTCTTTGAGGAGAATCATGGGGGGGGTCAGACCTCACTaGACTGCCTGCTCCCTGTGT +
Preference number: 3 (lower is better)
Translates to: THTHTHTSHTISLRRIMGGVRPH*TACSLC
Trigger: ACACAGGGAGCAGGCAGTCAAGTGAGGTCTGACCCC...CCCCATGATTCTCCTCAAAGAAATTGTGTGTGATGTGTGTGTGTGTGTGTGTGT
51% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR TCA 72 bp ACAGAGTGTGCCCTGAGAATCATATGCAGAACAGACTaGAAATGCCTCACACAAGCACGTGGTCAGCTGCCC +
Preference number: 3 (lower is better)
Translates to: TECALRIICRTD*KCLTQARGQLP
Trigger: GGGCAGCTGACCACGTGCTTGTGTGAGGCATTTTCAGTCTGTTCTGCATATGATTCTCAGGGCACACTCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR TCA 72 bp ACACTGAACACACCTGTACAGGCACTGCATCTCCTGTaGCACAGACACACACACACACACACACACACACAC +
Preference number: 3 (lower is better)
Translates to: TLNTPVQALHLL*HRHTHTHTHTH
Trigger: GTGTGTGTGTGTGTGTGTGTGTGTGTGTCTGTGTCACAGGAGATGCAGTGCCTGTACAGGTGTGTTCAGTGT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR GCA 72 bp CTTTCTTCACCAAACAAGGGACCTCCCAGCATCTTGTaGACCTTGGACAGTGTCCTGAGCATGGTCTTTCTC +
Preference number: 3 (lower is better)
Translates to: LSSPNKGPPSIL*TLDSVLSMVFL
Trigger: GAGAAAGACCATGCTCAGGACACTGTCCAAGGTGCACAAGATGCTGGGAGGTCCCTTGTTTGGTGAAGAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR GCA 72 bp TCGACCCAACACTGCCTGGGGAAATGGCTGTGGTTCTaGATGGAATGGACACATTCGACACCCAAGATAACA +
Preference number: 3 (lower is better)
Translates to: STQHCLGKWLWF*MEWTHSTPKIT
Trigger: TGTTATCTTGGGTGTCGAATGTGTCCATTCCATGCAGAACCACAGCCATTTCCCCAGGCAGTGTTGGGTCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR CCA 72 bp GGGTTTAGAAAAGTGGATTCTCGACCCAACACTGCCTaGGGAAATGGCTGTGGTTCTGCATGGAATGGACAC +
Preference number: 3 (lower is better)
Translates to: GFRKVDSRPNTA*GNGCGSAWNGH
Trigger: GTGTCCATTCCATGCAGAACCACAGCCATTTCCCCAGGCAGTGTTGGGTCGAGAATCCACTTTTCTAAACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR CAA 90 bp TCATGGGGTAGAAGCCAAGAATCCAACACAGATCATCTGGAATTTCAGAACACGTGCCCTGTGGCTTCCTaGGAAACCCCTTCCACTCGT +
Preference number: 3 (lower is better)
Translates to: SWGRSQESNTDHLEFQNTCPVAS*ETPSTR
Trigger: ACGAGTGGAAGGGGTTTCCAAGGAAGCCACAGGGCA...CGTGTTCTGAAATTCCAGATGATCTGTGTTGGATTCTTGGCTTCTACCCCATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR CAA 90 bp GGGGTAGAAGCCAAGAATCCAACACAGATCATCTGGAATTTCAGAACACGGAGGCCTTCCTACCAGCCTTaGCCTCTCTTCTGCTGTATG +
Preference number: 3 (lower is better)
Translates to: GVEAKNPTQIIWNFRTRRPSYQP*PLFCCM
Trigger: CATACAGCAGAAGAGAGGCAAAGGCTGGTAGGAAGG...CCTCCGTGTTCTGAAATTCCAGATGATCTGTGTTGGATTCTTGGCTTCTACCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR CAA 90 bp ACACACACACACACACACACATCACACACAATTTCTTTGAGGAGAATCATGGGGGGACCTCCCAGCATCTaGTGCACCTTGGACAGTGTC +
Preference number: 3 (lower is better)
Translates to: THTHTHTSHTISLRRIMGGPPSI*CTLDSV
Trigger: GACACTGTCCAAGGTGCACAAGATGCTGGGAGGTCC...CCCCATGATTCTCCTCAAAGAAATTGTGTGTGATGTGTGTGTGTGTGTGTGTGT
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR CAA 90 bp CAGCAAACTAGTCAATCACAGAATTTCTTTTTAAGTAGGTCCCAGTTGTGTTGCTCCACTGGCAAGGGCTaGCTACCTGGCTGCCATCGC +
Preference number: 3 (lower is better)
Translates to: QQTSQSQNFFLSRSQLCCSTGKG*LPGCHR
Trigger: GCGATGGCAGCCAGGTAGCAAGCCCTTGCCAGTGGA...GCAACACAACTGGGACCTACTTAAAAAGAAATTCTGTGATTGACTAGTTTGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR CAA 90 bp TCATGGGGTAGAAGCCAAGAATCCAACACAGATCATCTGGAATTTCAGAACACGCAGCAAATGGCTGCCTaGTTTGCCACCATGACATCC +
Preference number: 3 (lower is better)
Translates to: SWGRSQESNTDHLEFQNTQQMAA*FATMTS
Trigger: GGATGTCATGGTGGCAAACAAGGCAGCCATTTGCTG...CGTGTTCTGAAATTCCAGATGATCTGTGTTGGATTCTTGGCTTCTACCCCATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR CAA 90 bp ACACACACACACACACACACATCACACACAATTTCTTTGAGGAGAATCATGGGGCCTTCCTACCAGCCTTaGCCTCTCTTCTGCTGTATG +
Preference number: 3 (lower is better)
Translates to: THTHTHTSHTISLRRIMGPSYQP*PLFCCM
Trigger: CATACAGCAGAAGAGAGGCAAAGGCTGGTAGGAAGG...CCCCATGATTCTCCTCAAAGAAATTGTGTGTGATGTGTGTGTGTGTGTGTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR CAA 90 bp ACACACACACACACACACACATCACACACAATTTCTTTGAGGAGAATCATGGGGAGCATCTTGTGCACCTaGGACAGTGTCCTGAGCATG +
Preference number: 3 (lower is better)
Translates to: THTHTHTSHTISLRRIMGSILCT*DSVLSM
Trigger: CATGCTCAGGACACTGTCCAAGGTGCACAAGATGCT...CCCCATGATTCTCCTCAAAGAAATTGTGTGTGATGTGTGTGTGTGTGTGTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR GCA 72 bp GGAATTTCAGAACACGGAGGACACACCACCATCAACTaGTCTAAATGCTCCCTTTCTTCACCAAACAAGGGA +
Preference number: 3 (lower is better)
Translates to: GISEHGGHTTIN*SKCSLSSPNKG
Trigger: TCCCTTGTTTGGTGAAGAAAGGGAGCATTTAGAGCAGTTGATGGTGGTGTGTCCTCCGTGTTCTGAAATTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR GCA 72 bp TGTTCAAACTACAGCCACTGCTTGACTGGTTCCAGATaGAGACAACTGGGTGATGCACTTCAAATTTGGCAG +
Preference number: 3 (lower is better)
Translates to: CSNYSHCLTGSR*RQLGDALQIWQ
Trigger: CTGCCAAATTTGAAGTGCATCACCCAGTTGTCTGCATCTGGAACCAGTCAAGCAGTGGCTGTAGTTTGAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR CCA 72 bp CATGGGGTAGAAGCCAAGAATCCAACACAGATCATCTaGAATTTCAGAACACGGAGGACACACCACCATCAA +
Preference number: 3 (lower is better)
Translates to: HGVEAKNPTQII*NFRTRRTHHHQ
Trigger: TTGATGGTGGTGTGTCCTCCGTGTTCTGAAATTCCAGATGATCTGTGTTGGATTCTTGGCTTCTACCCCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR TCA 72 bp CACACACACACACACACACATCACACACAATTTCTTTaGGGAGAATCATGGGGTAGAAGCCAAGAATCCAAC +
Preference number: 3 (lower is better)
Translates to: HTHTHTHHTQFL*GESWGRSQESN
Trigger: GTTGGATTCTTGGCTTCTACCCCATGATTCTCCTCAAAGAAATTGTGTGTGATGTGTGTGTGTGTGTGTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR TCA 72 bp AACTGGGTGATGCACTTCAAATTTGGCAGCTCACTATaGGATTCAGGGGACATATATGATAGCCGGAGAAGA +
Preference number: 3 (lower is better)
Translates to: NWVMHFKFGSSL*DSGDIYDSRRR
Trigger: TCTTCTCCGGCTATCATATATGTCCCCTGAATCTCATAGTGAGCTGCCAAATTTGAAGTGCATCACCCAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR GCA 72 bp TTACATGCACACATAACTTGTTCAAACTACAGCCACTaGTTGACTGGTTCCAGATGCAGACAACTGGGTGAT +
Preference number: 3 (lower is better)
Translates to: LHAHITCSNYSH*LTGSRCRQLGD
Trigger: ATCACCCAGTTGTCTGCATCTGGAACCAGTCAAGCAGTGGCTGTAGTTTGAACAAGTTATGTGTGCATGTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR CAA 90 bp TCACATGCACAGTCCGAGATTCCTGGTTTATTCTATTGGAATAAAATACTCTGTCCTTCCTACCAGCCTTaGCCTCTCTTCTGCTGTATG +
Preference number: 3 (lower is better)
Translates to: SHAQSEIPGLFYWNKILCPSYQP*PLFCCM
Trigger: CATACAGCAGAAGAGAGGCAAAGGCTGGTAGGAAGG...ACAGAGTATTTTATTCCAATAGAATAAACCAGGAATCTCGGACTGTGCATGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR TCA 72 bp AAATACACATCCTTCTACTTTGCAACAGGAGCACAGTaGTCACATGCACAGTCCGAGATTCCTGGTTTATTC +
Preference number: 3 (lower is better)
Translates to: KYTSFYFATGAQ*SHAQSEIPGLF
Trigger: GAATAAACCAGGAATCTCGGACTGTGCATGTGATCACTGTGCTCCTGTTGCAAAGTAGAAGGATGTGTATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR CAA 90 bp TCACATGCACAGTCCGAGATTCCTGGTTTATTCTATTGGAATAAAATACTCTGTGACCAGGCAGCGGTCTaGTGTGTTTTACTTCTATTA +
Preference number: 3 (lower is better)
Translates to: SHAQSEIPGLFYWNKILCDQAAV*CVLLLL
Trigger: TAATAGAAGTAAAACACACAAGACCGCTGCCTGGTC...ACAGAGTATTTTATTCCAATAGAATAAACCAGGAATCTCGGACTGTGCATGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR CAA 90 bp CAGCAAACTAGTCAATCACAGAATTTCTTTTTAAGTAGGTCCCAGTTGTGTTGCACATGCACACATAACTaGTTCAAACTACAGCCACTG +
Preference number: 3 (lower is better)
Translates to: QQTSQSQNFFLSRSQLCCTCTHN*FKLQPL
Trigger: CAGTGGCTGTAGTTTGAACAAGTTATGTGTGCATGT...GCAACACAACTGGGACCTACTTAAAAAGAAATTCTGTGATTGACTAGTTTGCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp CACAGGAGCCTCACCAAGGTGGGCAAGGCCTCCCCCGAGGGCCGGCTGCCCCGTCCTCAGGTCGGGCTTTaGCTCCCACGGGCCCCCGCG +
Preference number: 4 (lower is better)
Translates to: HRSLTKVGKASPEGRLPRPQVGL*LPRAPA
Trigger: CGCGGGGGCCCGTGGGAGGCAAAGCCCGACCTGAGG...ACGGGGCAGCCGGCCCTCGGGGGAGGCCTTGCCCACCTTGGTGAGGCTCCTGTG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp CACAGGAGCCTCACCAAGGTGGGCAAGGCCTCCCCCGAGGGCCGGCTGCCCCGTGGTGCCGGTGGTGCCTaGGCGGAGGGTCGACGCCCT +
Preference number: 4 (lower is better)
Translates to: HRSLTKVGKASPEGRLPRGAGGA*AEGRRP
Trigger: AGGGCGTCGACCCTCCGCGCAGGCACCACCGGCACC...ACGGGGCAGCCGGCCCTCGGGGGAGGCCTTGCCCACCTTGGTGAGGCTCCTGTG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CACAGGAGCCTCACCAAGGTGGGCAAGGCCTCCCCCGAGGGCCGGCTGCCCCGTCGCCTGGCTAGGGGGTaGGCGGTCCGGGGTGGTGCT +
Preference number: 4 (lower is better)
Translates to: HRSLTKVGKASPEGRLPRRLARG*AVRGGA
Trigger: AGCACCACCCCGGACCGCCCACCCCCTAGCCAGGCG...ACGGGGCAGCCGGCCCTCGGGGGAGGCCTTGCCCACCTTGGTGAGGCTCCTGTG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp CACAGGAGCCTCACCAAGGTGGGCAAGGCCTCCCCCGAGGGCCGGCTGCCCCGTCGGAAAGCCCACGGCTaGGCCGGCCTGGGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: HRSLTKVGKASPEGRLPRRKAHG*AGLGRR
Trigger: CCTTCTCCCCAGGCCGGCTCAGCCGTGGGCTTTCCG...ACGGGGCAGCCGGCCCTCGGGGGAGGCCTTGCCCACCTTGGTGAGGCTCCTGTG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CACAGGAGCCTCACCAAGGTGGGCAAGGCCTCCCCCGAGGGCCGGCTGCCCCGTCTCGCACAGCCGGGCTaGGGCCTCCTTGCCACAGGG +
Preference number: 4 (lower is better)
Translates to: HRSLTKVGKASPEGRLPRLAQPG*GLLATG
Trigger: CCCTGTGGCAAGGAGGCCCCAGCCCGGCTGTGCGAG...ACGGGGCAGCCGGCCCTCGGGGGAGGCCTTGCCCACCTTGGTGAGGCTCCTGTG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CACAGGAGCCTCACCAAGGTGGGCAAGGCCTCCCCCGAGGGCCGGCTGCCCCGTGAGGCCGCTCGACCCTaGCTCTCCAGCCCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: HRSLTKVGKASPEGRLPREAARP*LSSPGW
Trigger: CCAGCCTGGGCTGGAGAGCCAGGGTCGAGCGGCCTC...ACGGGGCAGCCGGCCCTCGGGGGAGGCCTTGCCCACCTTGGTGAGGCTCCTGTG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CACAGGAGCCTCACCAAGGTGGGCAAGGCCTCCCCCGAGGGCCGGCTGCCCCGTTGGTGCGACGACGCCTaGCTAGGGGGTGGGCGGTCC +
Preference number: 4 (lower is better)
Translates to: HRSLTKVGKASPEGRLPRWCDDA*LGGGRS
Trigger: GGACCGCCCACCCCCTAGCCAGGCGTCGTCGCACCA...ACGGGGCAGCCGGCCCTCGGGGGAGGCCTTGCCCACCTTGGTGAGGCTCCTGTG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp CACAGGAGCCTCACCAAGGTGGGCAAGGCCTCCCCCGAGGGCCGGCTGCCCCGTCTGTCTTCCCGCTCTTaGGGCTGGCGCGGGCGAAGG +
Preference number: 4 (lower is better)
Translates to: HRSLTKVGKASPEGRLPRLSSRS*GWRGRR
Trigger: CCTTCGCCCGCGCCAGCCTCAAGAGCGGGAAGACAG...ACGGGGCAGCCGGCCCTCGGGGGAGGCCTTGCCCACCTTGGTGAGGCTCCTGTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp CACAGGAGCCTCACCAAGGTGGGCAAGGCCTCCCCCGAGGGCCGGCTGCCCCGTGCAGGGAGGCTGGTCTaGGCCCCGGCGAAGTGGATG +
Preference number: 4 (lower is better)
Translates to: HRSLTKVGKASPEGRLPRAGRLV*APAKWM
Trigger: CATCCACTTCGCCGGGGCTCAGACCAGCCTCCCTGC...ACGGGGCAGCCGGCCCTCGGGGGAGGCCTTGCCCACCTTGGTGAGGCTCCTGTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp CACAGGAGCCTCACCAAGGTGGGCAAGGCCTCCCCCGAGGGCCGGCTGCCCCGTTTGCTCGGATCCTGGTaGCGGTGCGCGCGGTGGCGT +
Preference number: 4 (lower is better)
Translates to: HRSLTKVGKASPEGRLPRLLGSW*RCARWR
Trigger: ACGCCACCGCGCGCACCGGCACCAGGATCCGAGCAA...ACGGGGCAGCCGGCCCTCGGGGGAGGCCTTGCCCACCTTGGTGAGGCTCCTGTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CACAGGAGCCTCACCAAGGTGGGCAAGGCCTCCCCCGAGGGCCGGCTGCCCCGTATGTCGGGCCGCAGGTaGCGCGTAGTGGCGAAGCGC +
Preference number: 4 (lower is better)
Translates to: HRSLTKVGKASPEGRLPRMSGRR*RVVAKR
Trigger: GCGCTTCGCCACTACGCGCCACCTGCGGCCCGACAT...ACGGGGCAGCCGGCCCTCGGGGGAGGCCTTGCCCACCTTGGTGAGGCTCCTGTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp TGGCGCCAGGACAGTGCTGGGCATCAGGTGCCCGGCCTCAGTGGCAGGAGCCGTCGCCTGGCTAGGGGGTaGGCGGTCCGGGGTGGTGCT +
Preference number: 4 (lower is better)
Translates to: WRQDSAGHQVPGLSGRSRRLARG*AVRGGA
Trigger: AGCACCACCCCGGACCGCCCACCCCCTAGCCAGGCG...ACGGCTCCTGCCACTGAGGCCGGGCACCTGATGCCCAGCACTGTCCTGGCGCCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp CACAGGAGCCTCACCAAGGTGGGCAAGGCCTCCCCCGAGGGCCGGCTGCCCCGTGGGCCCGCAGCACACTaGTCCCAAAGGAGCTTCCCG +
Preference number: 4 (lower is better)
Translates to: HRSLTKVGKASPEGRLPRGPAAH*SQRSFP
Trigger: CGGGAAGCTCCTTTGGGATCAGTGTGCTGCGGGCCC...ACGGGGCAGCCGGCCCTCGGGGGAGGCCTTGCCCACCTTGGTGAGGCTCCTGTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp CACAGGAGCCTCACCAAGGTGGGCAAGGCCTCCCCCGAGGGCCGGCTGCCCCGTCCTGGCGGAGCAGCTTaGTCAGCCGCGCAGCTCGAA +
Preference number: 4 (lower is better)
Translates to: HRSLTKVGKASPEGRLPRPGGAA*SAAQLE
Trigger: TTCGAGCTGCGCGGCTGATCAAGCTGCTCCGCCAGG...ACGGGGCAGCCGGCCCTCGGGGGAGGCCTTGCCCACCTTGGTGAGGCTCCTGTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp CACAGGAGCCTCACCAAGGTGGGCAAGGCCTCCCCCGAGGGCCGGCTGCCCCGTCCCCCGTGGCGCTCCTaGACAGCAGCATCAGGGCTT +
Preference number: 4 (lower is better)
Translates to: HRSLTKVGKASPEGRLPRPPWRS*TAASGL
Trigger: AAGCCCTGATGCTGCTGTTCAGGAGCGCCACGGGGG...ACGGGGCAGCCGGCCCTCGGGGGAGGCCTTGCCCACCTTGGTGAGGCTCCTGTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp TGGCGCCAGGACAGTGCTGGGCATCAGGTGCCCGGCCTCAGTGGCAGGAGCCGTCGGAAAGCCCACGGCTaGGCCGGCCTGGGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: WRQDSAGHQVPGLSGRSRRKAHG*AGLGRR
Trigger: CCTTCTCCCCAGGCCGGCTCAGCCGTGGGCTTTCCG...ACGGCTCCTGCCACTGAGGCCGGGCACCTGATGCCCAGCACTGTCCTGGCGCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CACAGGAGCCTCACCAAGGTGGGCAAGGCCTCCCCCGAGGGCCGGCTGCCCCGTGGGATCTCTGTGGAGTaGCCACGCTCCAGGGGTGGC +
Preference number: 4 (lower is better)
Translates to: HRSLTKVGKASPEGRLPRGISVE*PRSRGG
Trigger: GCCACCCCTGGAGCGTGGCCACTCCACAGAGATCCC...ACGGGGCAGCCGGCCCTCGGGGGAGGCCTTGCCCACCTTGGTGAGGCTCCTGTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp TGGCGCCAGGACAGTGCTGGGCATCAGGTGCCCGGCCTCAGTGGCAGGAGCCGTGAGGCCGCTCGACCCTaGCTCTCCAGCCCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: WRQDSAGHQVPGLSGRSREAARP*LSSPGW
Trigger: CCAGCCTGGGCTGGAGAGCCAGGGTCGAGCGGCCTC...ACGGCTCCTGCCACTGAGGCCGGGCACCTGATGCCCAGCACTGTCCTGGCGCCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGCGCCTGGCTAGGGGGTaGGCGGTCCGGGGTGGTGCT +
Preference number: 4 (lower is better)
Translates to: EVSAHFQVGPASLCRTATRLARG*AVRGGA
Trigger: AGCACCACCCCGGACCGCCCACCCCCTAGCCAGGCG...CGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CACAGGAGCCTCACCAAGGTGGGCAAGGCCTCCCCCGAGGGCCGGCTGCCCCGTAGGAGCGGCCCGAGTTaGTGGCCACAGCCTCCTCGA +
Preference number: 4 (lower is better)
Translates to: HRSLTKVGKASPEGRLPRRSGPS*WPQPPR
Trigger: TCGAGGAGGCTGTGGCCACCAACTCGGGCCGCTCCT...ACGGGGCAGCCGGCCCTCGGGGGAGGCCTTGCCCACCTTGGTGAGGCTCCTGTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CACAGGAGCCTCACCAAGGTGGGCAAGGCCTCCCCCGAGGGCCGGCTGCCCCGTCCTGCTCCCTGTGTCTaGCGCCAGGACAGTGCTGGG +
Preference number: 4 (lower is better)
Translates to: HRSLTKVGKASPEGRLPRPAPCV*RQDSAG
Trigger: CCCAGCACTGTCCTGGCGCCAGACACAGGGAGCAGG...ACGGGGCAGCCGGCCCTCGGGGGAGGCCTTGCCCACCTTGGTGAGGCTCCTGTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp CACAGGAGCCTCACCAAGGTGGGCAAGGCCTCCCCCGAGGGCCGGCTGCCCCGTTCTCGCTCGATCTGCTaGTGCCGGCGCAGCTTCAGG +
Preference number: 4 (lower is better)
Translates to: HRSLTKVGKASPEGRLPRSRSIC*CRRSFR
Trigger: CCTGAAGCTGCGCCGGCAGCAGCAGATCGAGCGAGA...ACGGGGCAGCCGGCCCTCGGGGGAGGCCTTGCCCACCTTGGTGAGGCTCCTGTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp CACAGGAGCCTCACCAAGGTGGGCAAGGCCTCCCCCGAGGGCCGGCTGCCCCGTGGTCCGGGGTGGTGCTaGAAAGATGAGTCCCACGGG +
Preference number: 4 (lower is better)
Translates to: HRSLTKVGKASPEGRLPRGPGWC*KDESHG
Trigger: CCCGTGGGACTCATCTTTGCAGCACCACCCCGGACC...ACGGGGCAGCCGGCCCTCGGGGGAGGCCTTGCCCACCTTGGTGAGGCTCCTGTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp CACAGGAGCCTCACCAAGGTGGGCAAGGCCTCCCCCGAGGGCCGGCTGCCCCGTCCCCCGAGGGCCGGCTaGCCCGTGTGGATGATAAAA +
Preference number: 4 (lower is better)
Translates to: HRSLTKVGKASPEGRLPRPPRAG*PVWMIK
Trigger: TTTTATCATCCACACGGGGCAGCCGGCCCTCGGGGG...ACGGGGCAGCCGGCCCTCGGGGGAGGCCTTGCCCACCTTGGTGAGGCTCCTGTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CACAGGAGCCTCACCAAGGTGGGCAAGGCCTCCCCCGAGGGCCGGCTGCCCCGTGACACAGGACCCATCTaGGAGAGGCCTCCAGGAGCC +
Preference number: 4 (lower is better)
Translates to: HRSLTKVGKASPEGRLPRDTGPI*ERPPGA
Trigger: GGCTCCTGGAGGCCTCTCCCAGATGGGTCCTGTGTC...ACGGGGCAGCCGGCCCTCGGGGGAGGCCTTGCCCACCTTGGTGAGGCTCCTGTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CACAGGAGCCTCACCAAGGTGGGCAAGGCCTCCCCCGAGGGCCGGCTGCCCCGTGGTGGCCTGGCCTCATaGGGTGCATCCTGGGTCCTT +
Preference number: 4 (lower is better)
Translates to: HRSLTKVGKASPEGRLPRGGLAS*GASWVL
Trigger: AAGGACCCAGGATGCACCCCATGAGGCCAGGCCACC...ACGGGGCAGCCGGCCCTCGGGGGAGGCCTTGCCCACCTTGGTGAGGCTCCTGTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGGAGGCCGCTCGACCCTaGCTCTCCAGCCCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: EVSAHFQVGPASLCRTATEAARP*LSSPGW
Trigger: CCAGCCTGGGCTGGAGAGCCAGGGTCGAGCGGCCTC...CGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGGTCCCACGGGGCCGCTaGGCCAGCGTGGAGATGGAG +
Preference number: 4 (lower is better)
Translates to: EVSAHFQVGPASLCRTATVPRGR*ASVEME
Trigger: CTCCATCTCCACGCTGGCCCAGCGGCCCCGTGGGAC...CGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp TCGGCCACCCGAGCTGAGTCCCAGGGTGCAGTGGTAACCGTTGGGCACGCGGCGTGGCAGCGGTGGTGGTaGTGGTGCGACGACGCCTGG +
Preference number: 4 (lower is better)
Translates to: SATRAESQGAVVTVGHAAWQRWW*WCDDAW
Trigger: CCAGGCGTCGTCGCACCACCACCACCACCGCTGCCA...CGCCGCGTGCCCAACGGTTACCACTGCACCCTGGGACTCAGCTCGGGTGGCCGA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp ACCCGAGCTGAGTCCCAGGGTGCAGTGGTAACCGTTGGGCACGCGGCGGAGAGGCGGTGGCAGCGGTGGTaGTGGTGGTGCGACGACGCC +
Preference number: 4 (lower is better)
Translates to: TRAESQGAVVTVGHAAERRWQRW*WWCDDA
Trigger: GGCGTCGTCGCACCACCACCACCACCGCTGCCACCG...CCTCTCCGCCGCGTGCCCAACGGTTACCACTGCACCCTGGGACTCAGCTCGGGT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp GCACCAGTGGTCTTGGTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGCCACCCGAGAGCCGGCCTGTGGGTaGGGTCCCGGCTCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: APVVLVRVVVAVPCSATREPACG*GPGSWP
Trigger: TGGCCAGGAGCCGGGACCCCACCCACAGGCCGGCTC...TCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGACCAAGACCACTGGTGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp CACAGGAGCCTCACCAAGGTGGGCAAGGCCTCCCCCGAGGGCCGGCTGCCCCGTTCCTCAGGCAGGGCGTaGACAGAGGCCTCACTGTCC +
Preference number: 4 (lower is better)
Translates to: HRSLTKVGKASPEGRLPRSSGRA*TEASLS
Trigger: GGACAGTGAGGCCTCTGTCCACGCCCTGCCTGAGGA...ACGGGGCAGCCGGCCCTCGGGGGAGGCCTTGCCCACCTTGGTGAGGCTCCTGTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp TGGCGCCAGGACAGTGCTGGGCATCAGGTGCCCGGCCTCAGTGGCAGGAGCCGTGGGCCCGCAGCACACTaGTCCCAAAGGAGCTTCCCG +
Preference number: 4 (lower is better)
Translates to: WRQDSAGHQVPGLSGRSRGPAAH*SQRSFP
Trigger: CGGGAAGCTCCTTTGGGATCAGTGTGCTGCGGGCCC...ACGGCTCCTGCCACTGAGGCCGGGCACCTGATGCCCAGCACTGTCCTGGCGCCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp TGGCGCCAGGACAGTGCTGGGCATCAGGTGCCCGGCCTCAGTGGCAGGAGCCGTCCCCCGTGGCGCTCCTaGACAGCAGCATCAGGGCTT +
Preference number: 4 (lower is better)
Translates to: WRQDSAGHQVPGLSGRSRPPWRS*TAASGL
Trigger: AAGCCCTGATGCTGCTGTTCAGGAGCGCCACGGGGG...ACGGCTCCTGCCACTGAGGCCGGGCACCTGATGCCCAGCACTGTCCTGGCGCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp TGGCGCCAGGACAGTGCTGGGCATCAGGTGCCCGGCCTCAGTGGCAGGAGCCGTACGTTGGGTGGCTGCTaGGGGAGGGCTTGGGCTTCG +
Preference number: 4 (lower is better)
Translates to: WRQDSAGHQVPGLSGRSRTLGGC*GRAWAS
Trigger: CGAAGCCCAAGCCCTCCCTCAGCAGCCACCCAACGT...ACGGCTCCTGCCACTGAGGCCGGGCACCTGATGCCCAGCACTGTCCTGGCGCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp CACAGGAGCCTCACCAAGGTGGGCAAGGCCTCCCCCGAGGGCCGGCTGCCCCGTCAGCCTCCTCGAAAGTaGGAGTGTCCTCAGGCAGGG +
Preference number: 4 (lower is better)
Translates to: HRSLTKVGKASPEGRLPRQPPRK*ECPQAG
Trigger: CCCTGCCTGAGGACACTCTCACTTTCGAGGAGGCTG...ACGGGGCAGCCGGCCCTCGGGGGAGGCCTTGCCCACCTTGGTGAGGCTCCTGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGGCAGGGAGGCTGGTCTaGGCCCCGGCGAAGTGGATG +
Preference number: 4 (lower is better)
Translates to: EVSAHFQVGPASLCRTATAGRLV*APAKWM
Trigger: CATCCACTTCGCCGGGGCTCAGACCAGCCTCCCTGC...CGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp AGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGTCGGAAAGCCCACGGCTaGGCCGGCCTGGGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: RSRRTFRWALLLCAARPRRKAHG*AGLGRR
Trigger: CCTTCTCCCCAGGCCGGCTCAGCCGTGGGCTTTCCG...ACGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGTGCCGCACGGCCACGTaGAGGGTGCTCCCCACAGGA +
Preference number: 4 (lower is better)
Translates to: EVSAHFQVGPASLCRTATCRTAT*RVLPTG
Trigger: TCCTGTGGGGAGCACCCTTCACGTGGCCGTGCGGCA...CGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GCCCGGCCTCAGTGGCAGGAGCCGTGTCCTCCCTCGGTCACTTGCTCTGAGTTTAGCTGGCTGGCCCGCTaGTCCCACACCGAGCGCGCC +
Preference number: 4 (lower is better)
Translates to: ARPQWQEPCPPSVTCSEFSWLAR*SHTERA
Trigger: GGCGCGCTCGGTGTGGGAGCAGCGGGCCAGCCAGCT...AAACTCAGAGCAAGTGACCGAGGGAGGACACGGCTCCTGCCACTGAGGCCGGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp CCACGTGAAGGGTGCTCCCCACAGGACGCAGAGCTCCTCACAACGGCTCCAAGCCCTCAGGTCGGGCTTTaGCTCCCACGGGCCCCCGCG +
Preference number: 4 (lower is better)
Translates to: PREGCSPQDAELLTTAPSPQVGL*LPRAPA
Trigger: CGCGGGGGCCCGTGGGAGGCAAAGCCCGACCTGAGG...GCTTGGAGCCGTTGTGAGGAGCTCTGCGTCCTGTGGGGAGCACCCTTCACGTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp CCACGTGAAGGGTGCTCCCCACAGGACGCAGAGCTCCTCACAACGGCTCCAAGCTCGCGGTGCCGGTGGTaGCTGCGCGGAGGGTCGACG +
Preference number: 4 (lower is better)
Translates to: PREGCSPQDAELLTTAPSSRCRW*LRGGST
Trigger: CGTCGACCCTCCGCGCAGGCACCACCGGCACCGCGA...GCTTGGAGCCGTTGTGAGGAGCTCTGCGTCCTGTGGGGAGCACCCTTCACGTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp TCGGCCACCCGAGCTGAGTCCCAGGGTGCAGTGGTAACCGTTGGGCACGCGGCGTTGTCCTTGTCGCGGTaGCGGTGGTGCCTGCGCGGA +
Preference number: 4 (lower is better)
Translates to: SATRAESQGAVVTVGHAALSLSR*RWCLRG
Trigger: TCCGCGCAGGCACCACCGGCACCGCGACAAGGACAA...CGCCGCGTGCCCAACGGTTACCACTGCACCCTGGGACTCAGCTCGGGTGGCCGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR GCA 90 bp ACGCCTGCTGCATGCAGGCGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTCGCCTTCGGGGCCTCTaGTCGGTCCTGGTCCCCCGC +
Preference number: 4 (lower is better)
Translates to: TPAACRRLSGHGAASTSGRLRGL*SVLVPR
Trigger: GCGGGGGACCAGGACCGAGCAGAGGCCCCGAAGGCG...ACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACGCCTGCATGCAGCAGGCGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR GCA 90 bp GAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGTTGCTCGGATCCTGGTaGCGGTGCGCGCGGTGGCGT +
Preference number: 4 (lower is better)
Translates to: EVSAHFQVGPASLCRTATLLGSW*RCARWR
Trigger: ACGCCACCGCGCGCACCGGCACCAGGATCCGAGCAA...CGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp CCCCTCCGTCCCGAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCCGGCGCACTCCTTaGTCGGATCCTGGTGCCGGT +
Preference number: 4 (lower is better)
Translates to: PLRPEVSAHFQVGPASLCRRRTP*SDPGAG
Trigger: ACCGGCACCAGGATCCGAGCAAGGAGTGCGCCGGCG...GCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTCGGGACGGAGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp ACCCGAGCTGAGTCCCAGGGTGCAGTGGTAACCGTTGGGCACGCGGCGGAGAGGCGGTGGTGGTGGTGGTaGGACGACGCCTGGCTAGGG +
Preference number: 4 (lower is better)
Translates to: TRAESQGAVVTVGHAAERRWWWW*DDAWLG
Trigger: CCCTAGCCAGGCGTCGTCGCACCACCACCACCACCG...CCTCTCCGCCGCGTGCCCAACGGTTACCACTGCACCCTGGGACTCAGCTCGGGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR GCA 90 bp ACCCGAGCTGAGTCCCAGGGTGCAGTGGTAACCGTTGGGCACGCGGCGGAGAGGGAGGAGGATGAGGGCTaGCTCCGCTCCTGGGACCGG +
Preference number: 4 (lower is better)
Translates to: TRAESQGAVVTVGHAAEREEDEG*LRSWDR
Trigger: CCGGTCCCAGGAGCGGAGGCAGCCCTCATCCTCCTC...CCTCTCCGCCGCGTGCCCAACGGTTACCACTGCACCCTGGGACTCAGCTCGGGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR GCA 90 bp CACAGGAGCCTCACCAAGGTGGGCAAGGCCTCCCCCGAGGGCCGGCTGCCCCGTCCTCACTTGACTGCCTaGTCCCTGTGTCTGGCGCCA +
Preference number: 4 (lower is better)
Translates to: HRSLTKVGKASPEGRLPRPHLTA*SLCLAP
Trigger: TGGCGCCAGACACAGGGAGCAGGCAGTCAAGTGAGG...ACGGGGCAGCCGGCCCTCGGGGGAGGCCTTGCCCACCTTGGTGAGGCTCCTGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GCTGAGTCCCAGGGTGCAGTGGTAACCGTTGGGCACGCGGCGGAGAGGGTGAGACTCGCACAGCCGGGCTaGGGCCTCCTTGCCACAGGG +
Preference number: 4 (lower is better)
Translates to: AESQGAVVTVGHAAERVRLAQPG*GLLATG
Trigger: CCCTGTGGCAAGGAGGCCCCAGCCCGGCTGTGCGAG...TCTCACCCTCTCCGCCGCGTGCCCAACGGTTACCACTGCACCCTGGGACTCAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp TTGGTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGCCACCCGAGCTGAGTCCCAGGCAGCCGTAGCTGGCTaGCCCGCTGCTCCCACACCG +
Preference number: 4 (lower is better)
Translates to: LVRVVVAVPCSATRAESQAAVAG*PAAPTP
Trigger: CGGTGTGGGAGCAGCGGGCCAGCCAGCTACGGCTGC...CTGGGACTCAGCTCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGACCAA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp GCACCAGTGGTCTTGGTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGCCACCCGATTGTCGCGGTGCCGGTaGTGCCTGCGCGGAGGGTCG +
Preference number: 4 (lower is better)
Translates to: APVVLVRVVVAVPCSATRLSRCR*CLRGGS
Trigger: CGACCCTCCGCGCAGGCACCACCGGCACCGCGACAA...TCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGACCAAGACCACTGGTGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp AGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGTTTGTCGCGGTGCCGGTaGTGCCTGCGCGGAGGGTCG +
Preference number: 4 (lower is better)
Translates to: RSRRTFRWALLLCAARPRLSRCR*CLRGGS
Trigger: CGACCCTCCGCGCAGGCACCACCGGCACCGCGACAA...ACGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGCCACCCGAGCTGAGTCCCAGGGTTCCTTGCTCGGATCCTaGTGCCGGTGCGCGCGGTGG +
Preference number: 4 (lower is better)
Translates to: VRVVVAVPCSATRAESQGSLLGS*CRCARW
Trigger: CCACCGCGCGCACCGGCACCAGGATCCGAGCAAGGA...ACCCTGGGACTCAGCTCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp GAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGTCCTTGCTCGGATCCTaGTGCCGGTGCGCGCGGTGG +
Preference number: 4 (lower is better)
Translates to: EVSAHFQVGPASLCRTATSLLGS*CRCARW
Trigger: CCACCGCGCGCACCGGCACCAGGATCCGAGCAAGGA...CGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp TGGCGCCAGGACAGTGCTGGGCATCAGGTGCCCGGCCTCAGTGGCAGGAGCCGTCACTGGGAACGACCGTaGCTTCCCCAAGAGGGCCCG +
Preference number: 4 (lower is better)
Translates to: WRQDSAGHQVPGLSGRSRHWERP*LPQEGP
Trigger: CGGGCCCTCTTGGGGAAGCCACGGTCGTTCCCAGTG...ACGGCTCCTGCCACTGAGGCCGGGCACCTGATGCCCAGCACTGTCCTGGCGCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CACAGGAGCCTCACCAAGGTGGGCAAGGCCTCCCCCGAGGGCCGGCTGCCCCGTGGTCCACGTTACCACTaGGAACGACCGTGGCTTCCC +
Preference number: 4 (lower is better)
Translates to: HRSLTKVGKASPEGRLPRGPRYH*ERPWLP
Trigger: GGGAAGCCACGGTCGTTCCCAGTGGTAACGTGGACC...ACGGGGCAGCCGGCCCTCGGGGGAGGCCTTGCCCACCTTGGTGAGGCTCCTGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CACAGGAGCCTCACCAAGGTGGGCAAGGCCTCCCCCGAGGGCCGGCTGCCCCGTGAACATGGAGCTGTATaGGACGATAGGCCGGGGGCC +
Preference number: 4 (lower is better)
Translates to: HRSLTKVGKASPEGRLPREHGAV*DDRPGA
Trigger: GGCCCCCGGCCTATCGTCCCATACAGCTCCATGTTC...ACGGGGCAGCCGGCCCTCGGGGGAGGCCTTGCCCACCTTGGTGAGGCTCCTGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp TGGCGCCAGGACAGTGCTGGGCATCAGGTGCCCGGCCTCAGTGGCAGGAGCCGTCGAGTCTGTGCGCACTaGGTCCTCAGCAGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: WRQDSAGHQVPGLSGRSRRVCAH*VLSSQG
Trigger: GCCCTGGCTGCTGAGGACCCAGTGCGCACAGACTCG...ACGGCTCCTGCCACTGAGGCCGGGCACCTGATGCCCAGCACTGTCCTGGCGCCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CACAGGAGCCTCACCAAGGTGGGCAAGGCCTCCCCCGAGGGCCGGCTGCCCCGTGTGGCCTTCAGAGGGTaGAACAGGGACACAGGACCC +
Preference number: 4 (lower is better)
Translates to: HRSLTKVGKASPEGRLPRVAFRG*NRDTGP
Trigger: GGGTCCTGTGTCCCTGTTCCACCCTCTGAAGGCCAC...ACGGGGCAGCCGGCCCTCGGGGGAGGCCTTGCCCACCTTGGTGAGGCTCCTGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp TGGCGCCAGGACAGTGCTGGGCATCAGGTGCCCGGCCTCAGTGGCAGGAGCCGTGCTCCAGGGGTGGCCTaGCCTCATGGGGTGCATCCT +
Preference number: 4 (lower is better)
Translates to: WRQDSAGHQVPGLSGRSRAPGVA*PHGVHP
Trigger: AGGATGCACCCCATGAGGCCAGGCCACCCCTGGAGC...ACGGCTCCTGCCACTGAGGCCGGGCACCTGATGCCCAGCACTGTCCTGGCGCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GCACCAGTGGTCTTGGTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGCCACCCGAGCCACGCTCCAGGGGTaGCCTGGCCTCATGGGGTGC +
Preference number: 4 (lower is better)
Translates to: APVVLVRVVVAVPCSATRATLQG*PGLMGC
Trigger: GCACCCCATGAGGCCAGGCCACCCCTGGAGCGTGGC...TCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGACCAAGACCACTGGTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp GTCTTGGTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGCCACCCGAGCTGAGTCCGAGGCCGCTCGACCCTaGCTCTCCAGCCCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: VLVRVVVAVPCSATRAESEAARP*LSSPGW
Trigger: CCAGCCTGGGCTGGAGAGCCAGGGTCGAGCGGCCTC...GGACTCAGCTCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGACCAAGAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp TGGCGCCAGGACAGTGCTGGGCATCAGGTGCCCGGCCTCAGTGGCAGGAGCCGTGCCGCTGGGCCAGCGTaGAGATGGAGCGCTTCATGG +
Preference number: 4 (lower is better)
Translates to: WRQDSAGHQVPGLSGRSRAAGPA*RWSASW
Trigger: CCATGAAGCGCTCCATCTCCACGCTGGCCCAGCGGC...ACGGCTCCTGCCACTGAGGCCGGGCACCTGATGCCCAGCACTGTCCTGGCGCCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GCTGAGTCCCAGGGTGCAGTGGTAACCGTTGGGCACGCGGCGGAGAGGGTGAGAGTCCCACGGGGCCGCTaGGCCAGCGTGGAGATGGAG +
Preference number: 4 (lower is better)
Translates to: AESQGAVVTVGHAAERVRVPRGR*ASVEME
Trigger: CTCCATCTCCACGCTGGCCCAGCGGCCCCGTGGGAC...TCTCACCCTCTCCGCCGCGTGCCCAACGGTTACCACTGCACCCTGGGACTCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp GCACCAGTGGTCTTGGTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGCCACCCGATGGTGCGACGACGCCTaGCTAGGGGGTGGGCGGTCC +
Preference number: 4 (lower is better)
Translates to: APVVLVRVVVAVPCSATRWCDDA*LGGGRS
Trigger: GGACCGCCCACCCCCTAGCCAGGCGTCGTCGCACCA...TCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGACCAAGACCACTGGTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR TCA 90 bp CACAGGAGCCTCACCAAGGTGGGCAAGGCCTCCCCCGAGGGCCGGCTGCCCCGTACTCCAGGTACCCGTTaGGCTCTCGCTCGATCTGCT +
Preference number: 4 (lower is better)
Translates to: HRSLTKVGKASPEGRLPRTPGTR*ALARSA
Trigger: AGCAGATCGAGCGAGAGCTCAACGGGTACCTGGAGT...ACGGGGCAGCCGGCCCTCGGGGGAGGCCTTGCCCACCTTGGTGAGGCTCCTGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp AGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGTCTGTCTTCCCGCTCTTaGGGCTGGCGCGGGCGAAGG +
Preference number: 4 (lower is better)
Translates to: RSRRTFRWALLLCAARPRLSSRS*GWRGRR
Trigger: CCTTCGCCCGCGCCAGCCTCAAGAGCGGGAAGACAG...ACGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp CCCCTCCGTCCCGAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCGGGCCCGCAGCACACTaGTCCCAAAGGAGCTTCCCG +
Preference number: 4 (lower is better)
Translates to: PLRPEVSAHFQVGPASLCGPAAH*SQRSFP
Trigger: CGGGAAGCTCCTTTGGGATCAGTGTGCTGCGGGCCC...GCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTCGGGACGGAGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp CACAGGAGCCTCACCAAGGTGGGCAAGGCCTCCCCCGAGGGCCGGCTGCCCCGTGACTGCCCATGCGAGTaGCGTTCCGCTGATTGTCTG +
Preference number: 4 (lower is better)
Translates to: HRSLTKVGKASPEGRLPRDCPCE*RSADCL
Trigger: CAGACAATCAGCGGAACGTCACTCGCATGGGCAGTC...ACGGGGCAGCCGGCCCTCGGGGGAGGCCTTGCCCACCTTGGTGAGGCTCCTGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGCCACCCGAGCTGAGTCCCAGGGTTTCGGGTCTGGGGGCTaGCTGCCCATGCGAGTGACG +
Preference number: 4 (lower is better)
Translates to: VRVVVAVPCSATRAESQGFGSGG*LPMRVT
Trigger: CGTCACTCGCATGGGCAGTCAGCCCCCAGACCCGAA...ACCCTGGGACTCAGCTCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR TCA 90 bp CCCCTCCGTCCCGAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCCCCCGTGGCGCTCCTaGACAGCAGCATCAGGGCTT +
Preference number: 4 (lower is better)
Translates to: PLRPEVSAHFQVGPASLCPPWRS*TAASGL
Trigger: AAGCCCTGATGCTGCTGTTCAGGAGCGCCACGGGGG...GCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTCGGGACGGAGGGG
68% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGCCACCCGAGCTGAGTCCCAGGGTCAGCTGGGGCCAGCTTaGTCTCCAGTGCCGTCCGGA +
Preference number: 4 (lower is better)
Translates to: VRVVVAVPCSATRAESQGQLGPA*SPVPSG
Trigger: TCCGGACGGCACTGGAGATCAAGCTGGCCCCAGCTG...ACCCTGGGACTCAGCTCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR TCA 90 bp GTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGCCACCCGAGCTGAGTCCCAGGGTCACAGCCAGTGCTCCTaGCCGCCCCACAGGGATCTC +
Preference number: 4 (lower is better)
Translates to: VRVVVAVPCSATRAESQGHSQCS*PPHRDL
Trigger: GAGATCCCTGTGGGGCGGTCAGGAGCACTGGCTGTG...ACCCTGGGACTCAGCTCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR TCA 90 bp CCCCTCCGTCCCGAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCACGTTGGGTGGCTGCTaGGGGAGGGCTTGGGCTTCG +
Preference number: 4 (lower is better)
Translates to: PLRPEVSAHFQVGPASLCTLGGC*GRAWAS
Trigger: CGAAGCCCAAGCCCTCCCTCAGCAGCCACCCAACGT...GCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTCGGGACGGAGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp AGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGTACGCGGCGGAGAGGGTaGGACTGGGAGGTCAGGGAG +
Preference number: 4 (lower is better)
Translates to: RSRRTFRWALLLCAARPRTRRRG*DWEVRE
Trigger: CTCCCTGACCTCCCAGTCTCACCCTCTCCGCCGCGT...ACGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp TTGGTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGCCACCCGAGCTGAGTCCCAGCTCGGCCACCCGAGCTaGGTCCCAGGGTGCAGTGGT +
Preference number: 4 (lower is better)
Translates to: LVRVVVAVPCSATRAESQLGHPS*VPGCSG
Trigger: ACCACTGCACCCTGGGACTCAGCTCGGGTGGCCGAG...CTGGGACTCAGCTCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGACCAA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR TCA 90 bp AGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGTCTCGGCCACCCGAGCTaGGTCCCAGGGTGCAGTGGT +
Preference number: 4 (lower is better)
Translates to: RSRRTFRWALLLCAARPRLGHPS*VPGCSG
Trigger: ACCACTGCACCCTGGGACTCAGCTCGGGTGGCCGAG...ACGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GCCCGGCCTCAGTGGCAGGAGCCGTGTCCTCCCTCGGTCACTTGCTCTGAGTTTCCAGGAGCCTGGGTGTaGGGGCCTGGCGGTCAGGCA +
Preference number: 4 (lower is better)
Translates to: ARPQWQEPCPPSVTCSEFPGAWV*GPGGQA
Trigger: TGCCTGACCGCCAGGCCCTCACACCCAGGCTCCTGG...AAACTCAGAGCAAGTGACCGAGGGAGGACACGGCTCCTGCCACTGAGGCCGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp CCCCTCCGTCCCGAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCACAGCATCCTGCGGTaGTGGATCCCGAGGCCTCGC +
Preference number: 4 (lower is better)
Translates to: PLRPEVSAHFQVGPASLCHSILR*WIPRPR
Trigger: GCGAGGCCTCGGGATCCATCACCGCAGGATGCTGTG...GCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTCGGGACGGAGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCCCTTCCACTCGTGGGAGGAGGAGCTGGCTGGCCCGCTaGTCCCACACCGAGCGCGCC +
Preference number: 4 (lower is better)
Translates to: VVSCPVASLETPSTRGRRSWLAR*SHTERA
Trigger: GGCGCGCTCGGTGTGGGAGCAGCGGGCCAGCCAGCT...CCTCCTCCCACGAGTGGAAGGGGTTTCCAAGGAAGCCACAGGGCAGCTGACCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GCTGTGCCGTGCTCGGCCACCCGAGCTGAGTCCCAGGGTGCAGTGGTAACCGTTCTGGCCCGCAGGTTCTaGAGCCGTAGCTGGCTGGCC +
Preference number: 4 (lower is better)
Translates to: AVPCSATRAESQGAVVTVLARRF*SRSWLA
Trigger: GGCCAGCCAGCTACGGCTGCAGAACCTGCGGGCCAG...AACGGTTACCACTGCACCCTGGGACTCAGCTCGGGTGGCCGAGCACGGCACAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR GCA 90 bp AGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGTCTGGCCCGCAGGTTCTaGAGCCGTAGCTGGCTGGCC +
Preference number: 4 (lower is better)
Translates to: RSRRTFRWALLLCAARPRLARRF*SRSWLA
Trigger: GGCCAGCCAGCTACGGCTGCAGAACCTGCGGGCCAG...ACGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GCGGTCACGGTGCAGCTAGCACCAGTGGTCTTGGTCAGGGTGGTGGTAGCTGTGGGTGCCGGTGGTGCCTaGGCGGAGGGTCGACGCCCT +
Preference number: 4 (lower is better)
Translates to: AVTVQLAPVVLVRVVVAVGAGGA*AEGRRP
Trigger: AGGGCGTCGACCCTCCGCGCAGGCACCACCGGCACC...CACAGCTACCACCACCCTGACCAAGACCACTGGTGCTAGCTGCACCGTGACCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR GCA 90 bp CGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTCTTGGTCAGGGTGGTGGTTCGCGGTGCCGGTGGTaGCTGCGCGGAGGGTCGACG +
Preference number: 4 (lower is better)
Translates to: RLSGHGAASTSGLGQGGGSRCRW*LRGGST
Trigger: CGTCGACCCTCCGCGCAGGCACCACCGGCACCGCGA...ACCACCACCCTGACCAAGACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR GCA 90 bp CCTGCTGCATGCAGGCGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTCTTCGCCTTCGGGGCCTCTaGTCGGTCCTGGTCCCCCGC +
Preference number: 4 (lower is better)
Translates to: PAACRRLSGHGAASTSGLRLRGL*SVLVPR
Trigger: GCGGGGGACCAGGACCGAGCAGAGGCCCCGAAGGCG...AAGACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACGCCTGCATGCAGCAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR GCA 90 bp TCGGCCACCCGAGCTGAGTCCCAGGGTGCAGTGGTAACCGTTGGGCACGCGGCGCACACGCCTGCTGCATaGAGGCGTCTGAGCGGTCAC +
Preference number: 4 (lower is better)
Translates to: SATRAESQGAVVTVGHAAHTPAA*RRLSGH
Trigger: GTGACCGCTCAGACGCCTGCATGCAGCAGGCGTGTG...CGCCGCGTGCCCAACGGTTACCACTGCACCCTGGGACTCAGCTCGGGTGGCCGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR GCA 90 bp AGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGTCTGGCGCCAGGACAGTaGTGGGCATCAGGTGCCCGG +
Preference number: 4 (lower is better)
Translates to: RSRRTFRWALLLCAARPRLAPGQ*WASGAR
Trigger: CCGGGCACCTGATGCCCAGCACTGTCCTGGCGCCAG...ACGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp ACCCGAGCTGAGTCCCAGGGTGCAGTGGTAACCGTTGGGCACGCGGCGGAGAGGACACCGAGCGCGCCTTaGCCGAGTTCTGCTGCCTGG +
Preference number: 4 (lower is better)
Translates to: TRAESQGAVVTVGHAAERTPSAP*PSSAAW
Trigger: CCAGGCAGCAGAACTCGGCCAAGGCGCGCTCGGTGT...CCTCTCCGCCGCGTGCCCAACGGTTACCACTGCACCCTGGGACTCAGCTCGGGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp CCACGTGAAGGGTGCTCCCCACAGGACGCAGAGCTCCTCACAACGGCTCCAAGCGCAGCCGTAGCTGGCTaGCCCGCTGCTCCCACACCG +
Preference number: 4 (lower is better)
Translates to: PREGCSPQDAELLTTAPSAAVAG*PAAPTP
Trigger: CGGTGTGGGAGCAGCGGGCCAGCCAGCTACGGCTGC...GCTTGGAGCCGTTGTGAGGAGCTCTGCGTCCTGTGGGGAGCACCCTTCACGTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GCTGAGTCCCAGGGTGCAGTGGTAACCGTTGGGCACGCGGCGGAGAGGGTGAGAATGTCGGGCCGCAGGTaGCGCGTAGTGGCGAAGCGC +
Preference number: 4 (lower is better)
Translates to: AESQGAVVTVGHAAERVRMSGRR*RVVAKR
Trigger: GCGCTTCGCCACTACGCGCCACCTGCGGCCCGACAT...TCTCACCCTCTCCGCCGCGTGCCCAACGGTTACCACTGCACCCTGGGACTCAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp GCACCAGTGGTCTTGGTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGCCACCCGATCCTTGCTCGGATCCTaGTGCCGGTGCGCGCGGTGG +
Preference number: 4 (lower is better)
Translates to: APVVLVRVVVAVPCSATRSLLGS*CRCARW
Trigger: CCACCGCGCGCACCGGCACCAGGATCCGAGCAAGGA...TCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGACCAAGACCACTGGTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp CGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTCTTGGTCAGGGTGGTGGTCGCCTGGCTAGGGGGTaGGCGGTCCGGGGTGGTGCT +
Preference number: 4 (lower is better)
Translates to: RLSGHGAASTSGLGQGGGRLARG*AVRGGA
Trigger: AGCACCACCCCGGACCGCCCACCCCCTAGCCAGGCG...ACCACCACCCTGACCAAGACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp ACGCCTGCTGCATGCAGGCGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTTGGTGCGACGACGCCTaGCTAGGGGGTGGGCGGTCC +
Preference number: 4 (lower is better)
Translates to: TPAACRRLSGHGAASTSGWCDDA*LGGGRS
Trigger: GGACCGCCCACCCCCTAGCCAGGCGTCGTCGCACCA...ACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACGCCTGCATGCAGCAGGCGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp TCGGCCACCCGAGCTGAGTCCCAGGGTGCAGTGGTAACCGTTGGGCACGCGGCGGTTGGCGACGTTGGGTaGCTGCTGAGGGAGGGCTTG +
Preference number: 4 (lower is better)
Translates to: SATRAESQGAVVTVGHAAVGDVG*LLREGL
Trigger: CAAGCCCTCCCTCAGCAGCCACCCAACGTCGCCAAC...CGCCGCGTGCCCAACGGTTACCACTGCACCCTGGGACTCAGCTCGGGTGGCCGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp TGGCGCCAGGACAGTGCTGGGCATCAGGTGCCCGGCCTCAGTGGCAGGAGCCGTAGCTGTTGGCGACGTTaGGTGGCTGCTGAGGGAGGG +
Preference number: 4 (lower is better)
Translates to: WRQDSAGHQVPGLSGRSRSCWRR*VAAEGG
Trigger: CCCTCCCTCAGCAGCCACCCAACGTCGCCAACAGCT...ACGGCTCCTGCCACTGAGGCCGGGCACCTGATGCCCAGCACTGTCCTGGCGCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CCTGCTGCATGCAGGCGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTCTTGAGCCGGCCTGTGGGTaGGGTCCCGGCTCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: PAACRRLSGHGAASTSGLEPACG*GPGSWP
Trigger: TGGCCAGGAGCCGGGACCCCACCCACAGGCCGGCTC...AAGACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACGCCTGCATGCAGCAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp TTGGTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGCCACCCGAGCTGAGTCCCAGGGAGCCTCACCAAGGTaGGCAAGGCCTCCCCCGAGG +
Preference number: 4 (lower is better)
Translates to: LVRVVVAVPCSATRAESQGASPR*ARPPPR
Trigger: CCTCGGGGGAGGCCTTGCCCACCTTGGTGAGGCTCC...CTGGGACTCAGCTCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGACCAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp AGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGTGGAACCACTGCCCTGTaGGTGGGGTCCCGGCTCCTG +
Preference number: 4 (lower is better)
Translates to: RSRRTFRWALLLCAARPRGTTAL*VGSRLL
Trigger: CAGGAGCCGGGACCCCACCCACAGGGCAGTGGTTCC...ACGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp TGGCGCCAGGACAGTGCTGGGCATCAGGTGCCCGGCCTCAGTGGCAGGAGCCGTCTGGGTGTGAGGGCCTaGCGGTCAGGCACTTGGTCA +
Preference number: 4 (lower is better)
Translates to: WRQDSAGHQVPGLSGRSRLGVRA*RSGTWS
Trigger: TGACCAAGTGCCTGACCGCCAGGCCCTCACACCCAG...ACGGCTCCTGCCACTGAGGCCGGGCACCTGATGCCCAGCACTGTCCTGGCGCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CACAGGAGCCTCACCAAGGTGGGCAAGGCCTCCCCCGAGGGCCGGCTGCCCCGTTCCAGTGCTCTCCACTaGCAAGGGCTTGCTACCTGG +
Preference number: 4 (lower is better)
Translates to: HRSLTKVGKASPEGRLPRSSALH*QGLATW
Trigger: CCAGGTAGCAAGCCCTTGCCAGTGGAGAGCACTGGA...ACGGGGCAGCCGGCCCTCGGGGGAGGCCTTGCCCACCTTGGTGAGGCTCCTGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GCACCAGTGGTCTTGGTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGCCACCCGACCCCCGTGGCGCTCCTaGACAGCAGCATCAGGGCTT +
Preference number: 4 (lower is better)
Translates to: APVVLVRVVVAVPCSATRPPWRS*TAASGL
Trigger: AAGCCCTGATGCTGCTGTTCAGGAGCGCCACGGGGG...TCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGACCAAGACCACTGGTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR TCA 90 bp GCTGTGCCGTGCTCGGCCACCCGAGCTGAGTCCCAGGGTGCAGTGGTAACCGTTCAGCTGGGGCCAGCTTaGTCTCCAGTGCCGTCCGGA +
Preference number: 4 (lower is better)
Translates to: AVPCSATRAESQGAVVTVQLGPA*SPVPSG
Trigger: TCCGGACGGCACTGGAGATCAAGCTGGCCCCAGCTG...AACGGTTACCACTGCACCCTGGGACTCAGCTCGGGTGGCCGAGCACGGCACAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR TCA 90 bp CCACGTGAAGGGTGCTCCCCACAGGACGCAGAGCTCCTCACAACGGCTCCAAGCTGGGGCTGGCATCTGTaGCGGGCTGAGTCTCGGCCG +
Preference number: 4 (lower is better)
Translates to: PREGCSPQDAELLTTAPSWGWHL*RAESRP
Trigger: CGGCCGAGACTCAGCCCGTCACAGATGCCAGCCCCA...GCTTGGAGCCGTTGTGAGGAGCTCTGCGTCCTGTGGGGAGCACCCTTCACGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GCCCGGCCTCAGTGGCAGGAGCCGTGTCCTCCCTCGGTCACTTGCTCTGAGTTTGCAGGGAGGCTGGTCTaGGCCCCGGCGAAGTGGATG +
Preference number: 4 (lower is better)
Translates to: ARPQWQEPCPPSVTCSEFAGRLV*APAKWM
Trigger: CATCCACTTCGCCGGGGCTCAGACCAGCCTCCCTGC...AAACTCAGAGCAAGTGACCGAGGGAGGACACGGCTCCTGCCACTGAGGCCGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp TTGGTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGCCACCCGAGCTGAGTCCCAGGGGCTGGGGCCTCCTTaGCACAGGGGAAGTCACCCA +
Preference number: 4 (lower is better)
Translates to: LVRVVVAVPCSATRAESQGLGPP*HRGSHP
Trigger: TGGGTGACTTCCCCTGTGGCAAGGAGGCCCCAGCCC...CTGGGACTCAGCTCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGACCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR GCA 90 bp AGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGTGGGCTGGGGCCTCCTTaGCACAGGGGAAGTCACCCA +
Preference number: 4 (lower is better)
Translates to: RSRRTFRWALLLCAARPRGLGPP*HRGSHP
Trigger: TGGGTGACTTCCCCTGTGGCAAGGAGGCCCCAGCCC...ACGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp ACCCGAGCTGAGTCCCAGGGTGCAGTGGTAACCGTTGGGCACGCGGCGGAGAGGCGCTCGATCTGCTGCTaGCGGCGCAGCTTCAGGAAG +
Preference number: 4 (lower is better)
Translates to: TRAESQGAVVTVGHAAERRSICC*RRSFRK
Trigger: CTTCCTGAAGCTGCGCCGGCAGCAGCAGATCGAGCG...CCTCTCCGCCGCGTGCCCAACGGTTACCACTGCACCCTGGGACTCAGCTCGGGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR GCA 90 bp TCGGCCACCCGAGCTGAGTCCCAGGGTGCAGTGGTAACCGTTGGGCACGCGGCGTTGGCCGAGTTCTGCTaGCTGGCGGCGATGGAGATG +
Preference number: 4 (lower is better)
Translates to: SATRAESQGAVVTVGHAALAEFC*LAAMEM
Trigger: CATCTCCATCGCCGCCAGGCAGCAGAACTCGGCCAA...CGCCGCGTGCCCAACGGTTACCACTGCACCCTGGGACTCAGCTCGGGTGGCCGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR GCA 90 bp GCTGAGTCCCAGGGTGCAGTGGTAACCGTTGGGCACGCGGCGGAGAGGGTGAGAGCCTTGGCCGAGTTCTaGTGCCTGGCGGCGATGGAG +
Preference number: 4 (lower is better)
Translates to: AESQGAVVTVGHAAERVRALAEF*CLAAME
Trigger: CTCCATCGCCGCCAGGCAGCAGAACTCGGCCAAGGC...TCTCACCCTCTCCGCCGCGTGCCCAACGGTTACCACTGCACCCTGGGACTCAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR GCA 90 bp GTCTTGGTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGCCACCCGAGCTGAGTCCGCCTTGGCCGAGTTCTaGTGCCTGGCGGCGATGGAG +
Preference number: 4 (lower is better)
Translates to: VLVRVVVAVPCSATRAESALAEF*CLAAME
Trigger: CTCCATCGCCGCCAGGCAGCAGAACTCGGCCAAGGC...GGACTCAGCTCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGACCAAGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR GCA 90 bp CCCGAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGAGCTGGCTGGCCCGCTaGTCCCACACCGAGCGCGCC +
Preference number: 4 (lower is better)
Translates to: PEGRLPRVDDKTHPLEHTSWLAR*SHTERA
Trigger: GGCGCGCTCGGTGTGGGAGCAGCGGGCCAGCCAGCT...CGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp CGGTTTAGGGTCTGGTGTGTGGTACGAGACCCAGGAAGGCAGGACAGGAAGGGGGGTGCCGGTGGTGCCTaGGCGGAGGGTCGACGCCCT +
Preference number: 4 (lower is better)
Translates to: RFRVWCVVRDPGRQDRKGGAGGA*AEGRRP
Trigger: AGGGCGTCGACCCTCCGCGCAGGCACCACCGGCACC...CCCCTTCCTGTCCTGCCTTCCTGGGTCTCGTACCACACACCAGACCCTAAACCG
67% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp CGGTTTAGGGTCTGGTGTGTGGTACGAGACCCAGGAAGGCAGGACAGGAAGGGGTCGCGGTGCCGGTGGTaGCTGCGCGGAGGGTCGACG +
Preference number: 4 (lower is better)
Translates to: RFRVWCVVRDPGRQDRKGSRCRW*LRGGST
Trigger: CGTCGACCCTCCGCGCAGGCACCACCGGCACCGCGA...CCCCTTCCTGTCCTGCCTTCCTGGGTCTCGTACCACACACCAGACCCTAAACCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp CCCGAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGTCGCGGTGCCGGTGGTaGCTGCGCGGAGGGTCGACG +
Preference number: 4 (lower is better)
Translates to: PEGRLPRVDDKTHPLEHTSRCRW*LRGGST
Trigger: CGTCGACCCTCCGCGCAGGCACCACCGGCACCGCGA...CGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GTCTTGGTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGCCACCCGAGCTGAGTCCTTGTCCTTGTCGCGGTaGCGGTGGTGCCTGCGCGGA +
Preference number: 4 (lower is better)
Translates to: VLVRVVVAVPCSATRAESLSLSR*RWCLRG
Trigger: TCCGCGCAGGCACCACCGGCACCGCGACAAGGACAA...GGACTCAGCTCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGACCAAGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR GCA 90 bp GAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGGGTCCGGGGTGGTGCTaGAAAGATGAGTCCCACGGG +
Preference number: 4 (lower is better)
Translates to: EVSAHFQVGPASLCRTATGPGWC*KDESHG
Trigger: CCCGTGGGACTCATCTTTGCAGCACCACCCCGGACC...CGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp ACGCCTGCTGCATGCAGGCGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTGAGGAGGATGAGGGCTaGCTCCGCTCCTGGGACCGG +
Preference number: 4 (lower is better)
Translates to: TPAACRRLSGHGAASTSGEEDEG*LRSWDR
Trigger: CCGGTCCCAGGAGCGGAGGCAGCCCTCATCCTCCTC...ACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACGCCTGCATGCAGCAGGCGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR GCA 90 bp TTGGTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGCCACCCGAGCTGAGTCCCAGGTGGTAGCTGTGCCGTaGTCGGCCACCCGAGCTGAG +
Preference number: 4 (lower is better)
Translates to: LVRVVVAVPCSATRAESQVVAVP*SATRAE
Trigger: CTCAGCTCGGGTGGCCGAGCACGGCACAGCTACCAC...CTGGGACTCAGCTCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGACCAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR GCA 90 bp ACCCGAGCTGAGTCCCAGGGTGCAGTGGTAACCGTTGGGCACGCGGCGGAGAGGCCCCCGAGGGCCGGCTaGCCCGTGTGGATGATAAAA +
Preference number: 4 (lower is better)
Translates to: TRAESQGAVVTVGHAAERPPRAG*PVWMIK
Trigger: TTTTATCATCCACACGGGGCAGCCGGCCCTCGGGGG...CCTCTCCGCCGCGTGCCCAACGGTTACCACTGCACCCTGGGACTCAGCTCGGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR GCA 90 bp GAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGCTTTCAGGTGGGCCCTaGTTCTCTGTGCCGCACGGC +
Preference number: 4 (lower is better)
Translates to: EVSAHFQVGPASLCRTATLSGGP*FSVPHG
Trigger: GCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAG...CGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp CACAGGAGCCTCACCAAGGTGGGCAAGGCCTCCCCCGAGGGCCGGCTGCCCCGTAAGCACGTGGTCAGCTaGCCTGTGGCTTCCTTGGAA +
Preference number: 4 (lower is better)
Translates to: HRSLTKVGKASPEGRLPRKHVVS*PVASLE
Trigger: TTCCAAGGAAGCCACAGGGCAGCTGACCACGTGCTT...ACGGGGCAGCCGGCCCTCGGGGGAGGCCTTGCCCACCTTGGTGAGGCTCCTGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CACAGGAGCCTCACCAAGGTGGGCAAGGCCTCCCCCGAGGGCCGGCTGCCCCGTCCGCATCTGTGCTGTTaGGGAAACAGGCCTTGTGGA +
Preference number: 4 (lower is better)
Translates to: HRSLTKVGKASPEGRLPRPHLCC*GNRPCG
Trigger: TCCACAAGGCCTGTTTCCCCAACAGCACAGATGCGG...ACGGGGCAGCCGGCCCTCGGGGGAGGCCTTGCCCACCTTGGTGAGGCTCCTGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp TCCAGGGAGGACAGAGCTTGCCTGAGTGAGCATTCGCTGACACTGGCGGGCTGCCTCGCACAGCCGGGCTaGGGCCTCCTTGCCACAGGG +
Preference number: 4 (lower is better)
Translates to: SREDRACLSEHSLTLAGCLAQPG*GLLATG
Trigger: CCCTGTGGCAAGGAGGCCCCAGCCCGGCTGTGCGAG...GCAGCCCGCCAGTGTCAGCGAATGCTCACTCAGGCAAGCTCTGTCCTCCCTGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CACAGGAGCCTCACCAAGGTGGGCAAGGCCTCCCCCGAGGGCCGGCTGCCCCGTACCGGAAGTAGCTTCTaGGCCCCAGGCCATACATCT +
Preference number: 4 (lower is better)
Translates to: HRSLTKVGKASPEGRLPRTGSSF*APGHTS
Trigger: AGATGTATGGCCTGGGGCCCAGAAGCTACTTCCGGT...ACGGGGCAGCCGGCCCTCGGGGGAGGCCTTGCCCACCTTGGTGAGGCTCCTGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGGCTGCCTGGCGGCGATaGAGATGTTCGCGGCAGACA +
Preference number: 4 (lower is better)
Translates to: EVSAHFQVGPASLCRTATAAWRR*RCSRQT
Trigger: TGTCTGCCGCGAACATCTCCATCGCCGCCAGGCAGC...CGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GCTGAGTCCCAGGGTGCAGTGGTAACCGTTGGGCACGCGGCGGAGAGGGTGAGAACACCGAGCGCGCCTTaGCCGAGTTCTGCTGCCTGG +
Preference number: 4 (lower is better)
Translates to: AESQGAVVTVGHAAERVRTPSAP*PSSAAW
Trigger: CCAGGCAGCAGAACTCGGCCAAGGCGCGCTCGGTGT...TCTCACCCTCTCCGCCGCGTGCCCAACGGTTACCACTGCACCCTGGGACTCAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp GTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCCCTTCCACTCGTGGGAGGAGGTTGTCGCGGTGCCGGTaGTGCCTGCGCGGAGGGTCG +
Preference number: 4 (lower is better)
Translates to: VVSCPVASLETPSTRGRRLSRCR*CLRGGS
Trigger: CGACCCTCCGCGCAGGCACCACCGGCACCGCGACAA...CCTCCTCCCACGAGTGGAAGGGGTTTCCAAGGAAGCCACAGGGCAGCTGACCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GCACCAGTGGTCTTGGTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGCCACCCGACACTGGGAACGACCGTaGCTTCCCCAAGAGGGCCCG +
Preference number: 4 (lower is better)
Translates to: APVVLVRVVVAVPCSATRHWERP*LPQEGP
Trigger: CGGGCCCTCTTGGGGAAGCCACGGTCGTTCCCAGTG...TCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGACCAAGACCACTGGTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp GCTGAGTCCCAGGGTGCAGTGGTAACCGTTGGGCACGCGGCGGAGAGGGTGAGACGAGTCTGTGCGCACTaGGTCCTCAGCAGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: AESQGAVVTVGHAAERVRRVCAH*VLSSQG
Trigger: GCCCTGGCTGCTGAGGACCCAGTGCGCACAGACTCG...TCTCACCCTCTCCGCCGCGTGCCCAACGGTTACCACTGCACCCTGGGACTCAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp TCGGCCACCCGAGCTGAGTCCCAGGGTGCAGTGGTAACCGTTGGGCACGCGGCGACAGCAGGATGCGGATaGTGTAGCCCTGGCGGAGCA +
Preference number: 4 (lower is better)
Translates to: SATRAESQGAVVTVGHAATAGCG*CSPGGA
Trigger: TGCTCCGCCAGGGCTACACCATCCGCATCCTGCTGT...CGCCGCGTGCCCAACGGTTACCACTGCACCCTGGGACTCAGCTCGGGTGGCCGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp GAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGGACACAGGACCCATCTaGGAGAGGCCTCCAGGAGCC +
Preference number: 4 (lower is better)
Translates to: EVSAHFQVGPASLCRTATDTGPI*ERPPGA
Trigger: GGCTCCTGGAGGCCTCTCCCAGATGGGTCCTGTGTC...CGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GCTGAGTCCCAGGGTGCAGTGGTAACCGTTGGGCACGCGGCGGAGAGGGTGAGAGCTCCAGGGGTGGCCTaGCCTCATGGGGTGCATCCT +
Preference number: 4 (lower is better)
Translates to: AESQGAVVTVGHAAERVRAPGVA*PHGVHP
Trigger: AGGATGCACCCCATGAGGCCAGGCCACCCCTGGAGC...TCTCACCCTCTCCGCCGCGTGCCCAACGGTTACCACTGCACCCTGGGACTCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp GCTGCATGCAGGCGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTCTTGGTGCCACGCTCCAGGGGTaGCCTGGCCTCATGGGGTGC +
Preference number: 4 (lower is better)
Translates to: AACRRLSGHGAASTSGLGATLQG*PGLMGC
Trigger: GCACCCCATGAGGCCAGGCCACCCCTGGAGCGTGGC...ACCAAGACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACGCCTGCATGCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp AGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGTGGGATCTCTGTGGAGTaGCCACGCTCCAGGGGTGGC +
Preference number: 4 (lower is better)
Translates to: RSRRTFRWALLLCAARPRGISVE*PRSRGG
Trigger: GCCACCCCTGGAGCGTGGCCACTCCACAGAGATCCC...ACGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GTGCAGCTAGCACCAGTGGTCTTGGTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGTCCCACGGGGCCGCTaGGCCAGCGTGGAGATGGAG +
Preference number: 4 (lower is better)
Translates to: VQLAPVVLVRVVVAVPCSVPRGR*ASVEME
Trigger: CTCCATCTCCACGCTGGCCCAGCGGCCCCGTGGGAC...CGAGCACGGCACAGCTACCACCACCCTGACCAAGACCACTGGTGCTAGCTGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp ACCCGAGCTGAGTCCCAGGGTGCAGTGGTAACCGTTGGGCACGCGGCGGAGAGGGTGGGCGGTCCGGGGTaGTGCTGCAAAGATGAGTCC +
Preference number: 4 (lower is better)
Translates to: TRAESQGAVVTVGHAAERVGGPG*CCKDES
Trigger: GGACTCATCTTTGCAGCACCACCCCGGACCGCCCAC...CCTCTCCGCCGCGTGCCCAACGGTTACCACTGCACCCTGGGACTCAGCTCGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp CCCCTCCGTCCCGAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCGTGGGCGGTCCGGGGTaGTGCTGCAAAGATGAGTCC +
Preference number: 4 (lower is better)
Translates to: PLRPEVSAHFQVGPASLCVGGPG*CCKDES
Trigger: GGACTCATCTTTGCAGCACCACCCCGGACCGCCCAC...GCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTCGGGACGGAGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CGGTTTAGGGTCTGGTGTGTGGTACGAGACCCAGGAAGGCAGGACAGGAAGGGGCGCCTGGCTAGGGGGTaGGCGGTCCGGGGTGGTGCT +
Preference number: 4 (lower is better)
Translates to: RFRVWCVVRDPGRQDRKGRLARG*AVRGGA
Trigger: AGCACCACCCCGGACCGCCCACCCCCTAGCCAGGCG...CCCCTTCCTGTCCTGCCTTCCTGGGTCTCGTACCACACACCAGACCCTAAACCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp ACCCGAGCTGAGTCCCAGGGTGCAGTGGTAACCGTTGGGCACGCGGCGGAGAGGGTTGGCGACGTTGGGTaGCTGCTGAGGGAGGGCTTG +
Preference number: 4 (lower is better)
Translates to: TRAESQGAVVTVGHAAERVGDVG*LLREGL
Trigger: CAAGCCCTCCCTCAGCAGCCACCCAACGTCGCCAAC...CCTCTCCGCCGCGTGCCCAACGGTTACCACTGCACCCTGGGACTCAGCTCGGGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp CCCCTCCGTCCCGAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCGTTGGCGACGTTGGGTaGCTGCTGAGGGAGGGCTTG +
Preference number: 4 (lower is better)
Translates to: PLRPEVSAHFQVGPASLCVGDVG*LLREGL
Trigger: CAAGCCCTCCCTCAGCAGCCACCCAACGTCGCCAAC...GCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTCGGGACGGAGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CCCCTCCGTCCCGAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCTCCTGGCCAGCTGTTaGCGACGTTGGGTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: PLRPEVSAHFQVGPASLCLLASC*RRWVAA
Trigger: AGCAGCCACCCAACGTCGCCAACAGCTGGCCAGGAG...GCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTCGGGACGGAGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp ACCCGAGCTGAGTCCCAGGGTGCAGTGGTAACCGTTGGGCACGCGGCGGAGAGGTCCTCAGGCAGGGCGTaGACAGAGGCCTCACTGTCC +
Preference number: 4 (lower is better)
Translates to: TRAESQGAVVTVGHAAERSSGRA*TEASLS
Trigger: GGACAGTGAGGCCTCTGTCCACGCCCTGCCTGAGGA...CCTCTCCGCCGCGTGCCCAACGGTTACCACTGCACCCTGGGACTCAGCTCGGGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp CCCCTCCGTCCCGAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCAGCGGCCCGAGTTGGTaGCCACAGCCTCCTCGAAAG +
Preference number: 4 (lower is better)
Translates to: PLRPEVSAHFQVGPASLCSGPSW*PQPPRK
Trigger: CTTTCGAGGAGGCTGTGGCCACCAACTCGGGCCGCT...GCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTCGGGACGGAGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GTCTTGGTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGCCACCCGAGCTGAGTCCAGGAGCGGCCCGAGTTaGTGGCCACAGCCTCCTCGA +
Preference number: 4 (lower is better)
Translates to: VLVRVVVAVPCSATRAESRSGPS*WPQPPR
Trigger: TCGAGGAGGCTGTGGCCACCAACTCGGGCCGCTCCT...GGACTCAGCTCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGACCAAGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp AGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGTAGGAGCGGCCCGAGTTaGTGGCCACAGCCTCCTCGA +
Preference number: 4 (lower is better)
Translates to: RSRRTFRWALLLCAARPRRSGPS*WPQPPR
Trigger: TCGAGGAGGCTGTGGCCACCAACTCGGGCCGCTCCT...ACGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp TCGGCCACCCGAGCTGAGTCCCAGGGTGCAGTGGTAACCGTTGGGCACGCGGCGACACGTAGGAAGTCCTaGAGGAGCGGCCCGAGTTGG +
Preference number: 4 (lower is better)
Translates to: SATRAESQGAVVTVGHAATRRKS*RSGPSW
Trigger: CCAACTCGGGCCGCTCCTCCAGGACTTCCTACGTGT...CGCCGCGTGCCCAACGGTTACCACTGCACCCTGGGACTCAGCTCGGGTGGCCGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp GTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGCCACCCGAGCTGAGTCCCAGGGTTGCAGTGGTAACCGTTaGGCACGCGGCGGAGAGGGT +
Preference number: 4 (lower is better)
Translates to: VRVVVAVPCSATRAESQGCSGNR*ARGGEG
Trigger: ACCCTCTCCGCCGCGTGCCCAACGGTTACCACTGCA...ACCCTGGGACTCAGCTCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp CCCCTCCGTCCCGAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCTGCAGTGGTAACCGTTaGGCACGCGGCGGAGAGGGT +
Preference number: 4 (lower is better)
Translates to: PLRPEVSAHFQVGPASLCCSGNR*ARGGEG
Trigger: ACCCTCTCCGCCGCGTGCCCAACGGTTACCACTGCA...GCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTCGGGACGGAGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCCCTTCCACTCGTGGGAGGAGGGGAGTCAGGGGCGTCTaGGGGAGCTGCCTCCGCCCA +
Preference number: 4 (lower is better)
Translates to: VVSCPVASLETPSTRGRRGVRGV*GSCLRP
Trigger: TGGGCGGAGGCAGCTCCCCCAGACGCCCCTGACTCC...CCTCCTCCCACGAGTGGAAGGGGTTTCCAAGGAAGCCACAGGGCAGCTGACCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGCCCCGGCGAAGTGGATaGGTGAGGAGTTGGCCGTCT +
Preference number: 4 (lower is better)
Translates to: EVSAHFQVGPASLCRTATPRRSG*VRSWPS
Trigger: AGACGGCCAACTCCTCACCCATCCACTTCGCCGGGG...CGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGAGAAGGCAGGGAGGCTaGTCTGAGCCCCGGCGAAGT +
Preference number: 4 (lower is better)
Translates to: EVSAHFQVGPASLCRTATRRQGG*SEPRRS
Trigger: ACTTCGCCGGGGCTCAGACCAGCCTCCCTGCCTTCT...CGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CACAGGAGCCTCACCAAGGTGGGCAAGGCCTCCCCCGAGGGCCGGCTGCCCCGTTTAGGGTCTGGTGTGTaGTACGAGACCCAGGAAGGC +
Preference number: 4 (lower is better)
Translates to: HRSLTKVGKASPEGRLPRLGSGV*YETQEG
Trigger: GCCTTCCTGGGTCTCGTACCACACACCAGACCCTAA...ACGGGGCAGCCGGCCCTCGGGGGAGGCCTTGCCCACCTTGGTGAGGCTCCTGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CCCCTCCGTCCCGAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGGCGCACTTTCAGGTaGGCCCTGCTTCTCTGTGCC +
Preference number: 4 (lower is better)
Translates to: PLRPEVSAHFQVGPASLCRRTFR*ALLLCA
Trigger: GGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCG...GCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTCGGGACGGAGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CCCCTCCGTCCCGAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCCGTCTACGTCCACCTaGACCGGACAGGGCTGCACA +
Preference number: 4 (lower is better)
Translates to: PLRPEVSAHFQVGPASLCPSTST*TGQGCT
Trigger: TGTGCAGCCCTGTCCGGTCCAGGTGGACGTAGACGG...GCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTCGGGACGGAGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp TCCAGGGAGGACAGAGCTTGCCTGAGTGAGCATTCGCTGACACTGGCGGGCTGCGGTGCCCGGCCTCAGTaGCAGGAGCCGTGTCCTCCC +
Preference number: 4 (lower is better)
Translates to: SREDRACLSEHSLTLAGCGARPQ*QEPCPP
Trigger: GGGAGGACACGGCTCCTGCCACTGAGGCCGGGCACC...GCAGCCCGCCAGTGTCAGCGAATGCTCACTCAGGCAAGCTCTGTCCTCCCTGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GCTGCATGCAGGCGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTCTTGGTCTGTCTTCCCGCTCTTaGGGCTGGCGCGGGCGAAGG +
Preference number: 4 (lower is better)
Translates to: AACRRLSGHGAASTSGLGLSSRS*GWRGRR
Trigger: CCTTCGCCCGCGCCAGCCTCAAGAGCGGGAAGACAG...ACCAAGACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACGCCTGCATGCAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR TCA 90 bp TCCAGGGAGGACAGAGCTTGCCTGAGTGAGCATTCGCTGACACTGGCGGGCTGCCTGTCTTCCCGCTCTTaGGGCTGGCGCGGGCGAAGG +
Preference number: 4 (lower is better)
Translates to: SREDRACLSEHSLTLAGCLSSRS*GWRGRR
Trigger: CCTTCGCCCGCGCCAGCCTCAAGAGCGGGAAGACAG...GCAGCCCGCCAGTGTCAGCGAATGCTCACTCAGGCAAGCTCTGTCCTCCCTGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp TTGGTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGCCACCCGAGCTGAGTCCCAGAGGAGCTTCCCGGCTTaGTGGCCGCCCAGACCACTT +
Preference number: 4 (lower is better)
Translates to: LVRVVVAVPCSATRAESQRSFPA*WPPRPL
Trigger: AAGTGGTCTGGGCGGCCATCAAGCCGGGAAGCTCCT...CTGGGACTCAGCTCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGACCAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR TCA 90 bp CCCCTCCGTCCCGAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCGGATCTGGAAGACAGTaGGGATGGCGGCAGGGAAGG +
Preference number: 4 (lower is better)
Translates to: PLRPEVSAHFQVGPASLCGSGRQ*GWRQGR
Trigger: CCTTCCCTGCCGCCATCCTCACTGTCTTCCAGATCC...GCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTCGGGACGGAGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GTCTTGGTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGCCACCCGAGCTGAGTCCTTCTCCACAGCCTCGTaGGCAGGCTGCGCCTTGTGC +
Preference number: 4 (lower is better)
Translates to: VLVRVVVAVPCSATRAESFSTAS*AGCALC
Trigger: GCACAAGGCGCAGCCTGCTCACGAGGCTGTGGAGAA...GGACTCAGCTCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGACCAAGAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR TCA 90 bp TCGGCCACCCGAGCTGAGTCCCAGGGTGCAGTGGTAACCGTTGGGCACGCGGCGCGAGTGACGTTCCGCTaGTTGTCTGCATCCTCTGGC +
Preference number: 4 (lower is better)
Translates to: SATRAESQGAVVTVGHAARVTFR*LSASSG
Trigger: GCCAGAGGATGCAGACAATCAGCGGAACGTCACTCG...CGCCGCGTGCCCAACGGTTACCACTGCACCCTGGGACTCAGCTCGGGTGGCCGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR TCA 90 bp GCCCGGCCTCAGTGGCAGGAGCCGTGTCCTCCCTCGGTCACTTGCTCTGAGTTTTTCGGGTCTGGGGGCTaGCTGCCCATGCGAGTGACG +
Preference number: 4 (lower is better)
Translates to: ARPQWQEPCPPSVTCSEFFGSGG*LPMRVT
Trigger: CGTCACTCGCATGGGCAGTCAGCCCCCAGACCCGAA...AAACTCAGAGCAAGTGACCGAGGGAGGACACGGCTCCTGCCACTGAGGCCGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GTGCAGCTAGCACCAGTGGTCTTGGTCAGGGTGGTGGTAGCTGTGCCGTGCTCGCCAGTGCCGTCCGGATaGGGGCCATCAGCGTGGACG +
Preference number: 4 (lower is better)
Translates to: VQLAPVVLVRVVVAVPCSPVPSG*GPSAWT
Trigger: CGTCCACGCTGATGGCCCTCATCCGGACGGCACTGG...CGAGCACGGCACAGCTACCACCACCCTGACCAAGACCACTGGTGCTAGCTGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR TCA 90 bp GCCCGGCCTCAGTGGCAGGAGCCGTGTCCTCCCTCGGTCACTTGCTCTGAGTTTCAGCTGGGGCCAGCTTaGTCTCCAGTGCCGTCCGGA +
Preference number: 4 (lower is better)
Translates to: ARPQWQEPCPPSVTCSEFQLGPA*SPVPSG
Trigger: TCCGGACGGCACTGGAGATCAAGCTGGCCCCAGCTG...AAACTCAGAGCAAGTGACCGAGGGAGGACACGGCTCCTGCCACTGAGGCCGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp CCTGCTGCATGCAGGCGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTCTTTGGGGCTGGCATCTGTaGCGGGCTGAGTCTCGGCCG +
Preference number: 4 (lower is better)
Translates to: PAACRRLSGHGAASTSGLWGWHL*RAESRP
Trigger: CGGCCGAGACTCAGCCCGTCACAGATGCCAGCCCCA...AAGACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACGCCTGCATGCAGCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR TCA 90 bp GCGGTCACGGTGCAGCTAGCACCAGTGGTCTTGGTCAGGGTGGTGGTAGCTGTGTGGGGCTGGCATCTGTaGCGGGCTGAGTCTCGGCCG +
Preference number: 4 (lower is better)
Translates to: AVTVQLAPVVLVRVVVAVWGWHL*RAESRP
Trigger: CGGCCGAGACTCAGCCCGTCACAGATGCCAGCCCCA...CACAGCTACCACCACCCTGACCAAGACCACTGGTGCTAGCTGCACCGTGACCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR TCA 90 bp GAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGCAGCCTCCTCGAAAGTaGGAGTGTCCTCAGGCAGGG +
Preference number: 4 (lower is better)
Translates to: EVSAHFQVGPASLCRTATQPPRK*ECPQAG
Trigger: CCCTGCCTGAGGACACTCTCACTTTCGAGGAGGCTG...CGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GTGCAGCTAGCACCAGTGGTCTTGGTCAGGGTGGTGGTAGCTGTGCCGTGCTCGACGCGGCGGAGAGGGTaGGACTGGGAGGTCAGGGAG +
Preference number: 4 (lower is better)
Translates to: VQLAPVVLVRVVVAVPCSTRRRG*DWEVRE
Trigger: CTCCCTGACCTCCCAGTCTCACCCTCTCCGCCGCGT...CGAGCACGGCACAGCTACCACCACCCTGACCAAGACCACTGGTGCTAGCTGCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR TCA 90 bp GCTGCATGCAGGCGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTCTTGGTCTCGGCCACCCGAGCTaGGTCCCAGGGTGCAGTGGT +
Preference number: 4 (lower is better)
Translates to: AACRRLSGHGAASTSGLGLGHPS*VPGCSG
Trigger: ACCACTGCACCCTGGGACTCAGCTCGGGTGGCCGAG...ACCAAGACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACGCCTGCATGCAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR TCA 90 bp GCACCAGTGGTCTTGGTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGCCACCCGACTGCATGCAGGCGTCTaGGCGGTCACGGTGCAGCTA +
Preference number: 4 (lower is better)
Translates to: APVVLVRVVVAVPCSATRLHAGV*AVTVQL
Trigger: TAGCTGCACCGTGACCGCTCAGACGCCTGCATGCAG...TCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGACCAAGACCACTGGTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR TCA 90 bp CGGTTTAGGGTCTGGTGTGTGGTACGAGACCCAGGAAGGCAGGACAGGAAGGGGCGGAAAGCCCACGGCTaGGCCGGCCTGGGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: RFRVWCVVRDPGRQDRKGRKAHG*AGLGRR
Trigger: CCTTCTCCCCAGGCCGGCTCAGCCGTGGGCTTTCCG...CCCCTTCCTGTCCTGCCTTCCTGGGTCTCGTACCACACACCAGACCCTAAACCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GCCCGGCCTCAGTGGCAGGAGCCGTGTCCTCCCTCGGTCACTTGCTCTGAGTTTCGGTTCCTGTGGGGCTaGCGGTGTCCAGGGAGGACA +
Preference number: 4 (lower is better)
Translates to: ARPQWQEPCPPSVTCSEFRFLWG*RCPGRT
Trigger: TGTCCTCCCTGGACACCGTCAGCCCCACAGGAACCG...AAACTCAGAGCAAGTGACCGAGGGAGGACACGGCTCCTGCCACTGAGGCCGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GCTGAGTCCCAGGGTGCAGTGGTAACCGTTGGGCACGCGGCGGAGAGGGTGAGATCTCGCTCGATCTGCTaGTGCCGGCGCAGCTTCAGG +
Preference number: 4 (lower is better)
Translates to: AESQGAVVTVGHAAERVRSRSIC*CRRSFR
Trigger: CCTGAAGCTGCGCCGGCAGCAGCAGATCGAGCGAGA...TCTCACCCTCTCCGCCGCGTGCCCAACGGTTACCACTGCACCCTGGGACTCAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR GCA 90 bp AGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGTTCTCGCTCGATCTGCTaGTGCCGGCGCAGCTTCAGG +
Preference number: 4 (lower is better)
Translates to: RSRRTFRWALLLCAARPRSRSIC*CRRSFR
Trigger: CCTGAAGCTGCGCCGGCAGCAGCAGATCGAGCGAGA...ACGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GTCTTGGTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGCCACCCGAGCTGAGTCCAGCTCTCGCTCGATCTaGTGCTGCCGGCGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: VLVRVVVAVPCSATRAESSSRSI*CCRRSF
Trigger: GAAGCTGCGCCGGCAGCAGCAGATCGAGCGAGAGCT...GGACTCAGCTCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGACCAAGAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR GCA 90 bp GCTGTGCCGTGCTCGGCCACCCGAGCTGAGTCCCAGGGTGCAGTGGTAACCGTTAGCTCTCGCTCGATCTaGTGCTGCCGGCGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: AVPCSATRAESQGAVVTVSSRSI*CCRRSF
Trigger: GAAGCTGCGCCGGCAGCAGCAGATCGAGCGAGAGCT...AACGGTTACCACTGCACCCTGGGACTCAGCTCGGGTGGCCGAGCACGGCACAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR GCA 90 bp GAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGTTGGCCGAGTTCTGCTaGCTGGCGGCGATGGAGATG +
Preference number: 4 (lower is better)
Translates to: EVSAHFQVGPASLCRTATLAEFC*LAAMEM
Trigger: CATCTCCATCGCCGCCAGGCAGCAGAACTCGGCCAA...CGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp CCACGTGAAGGGTGCTCCCCACAGGACGCAGAGCTCCTCACAACGGCTCCAAGCGCCTTGGCCGAGTTCTaGTGCCTGGCGGCGATGGAG +
Preference number: 4 (lower is better)
Translates to: PREGCSPQDAELLTTAPSALAEF*CLAAME
Trigger: CTCCATCGCCGCCAGGCAGCAGAACTCGGCCAAGGC...GCTTGGAGCCGTTGTGAGGAGCTCTGCGTCCTGTGGGGAGCACCCTTCACGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGAGCTGGCTGGCCCGCTaGTCCCACACCGAGCGCGCC +
Preference number: 4 (lower is better)
Translates to: AGCPVWMIKLIHWNTRLLSWLAR*SHTERA
Trigger: GGCGCGCTCGGTGTGGGAGCAGCGGGCCAGCCAGCT...CAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTAGCTGGCTGGCCCGCTaGTCCCACACCGAGCGCGCC +
Preference number: 4 (lower is better)
Translates to: EGRLPRVDDKTHPLEHTPSWLAR*SHTERA
Trigger: GGCGCGCTCGGTGTGGGAGCAGCGGGCCAGCCAGCT...AGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGCCTCAGGTCGGGCTTTaGCTCCCACGGGCCCCCGCG +
Preference number: 4 (lower is better)
Translates to: AGCPVWMIKLIHWNTRLLPQVGL*LPRAPA
Trigger: CGCGGGGGCCCGTGGGAGGCAAAGCCCGACCTGAGG...CAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTTCGCGGTGCCGGTGGTaGCTGCGCGGAGGGTCGACG +
Preference number: 4 (lower is better)
Translates to: EGRLPRVDDKTHPLEHTPSRCRW*LRGGST
Trigger: CGTCGACCCTCCGCGCAGGCACCACCGGCACCGCGA...AGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTCGCCTTCGGGGCCTCTaGTCGGTCCTGGTCCCCCGC +
Preference number: 4 (lower is better)
Translates to: EGRLPRVDDKTHPLEHTPRLRGL*SVLVPR
Trigger: GCGGGGGACCAGGACCGAGCAGAGGCCCCGAAGGCG...AGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp CGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTCTTGGTCAGGGTGGTGGTTTGCTCGGATCCTGGTaGCGGTGCGCGCGGTGGCGT +
Preference number: 4 (lower is better)
Translates to: RLSGHGAASTSGLGQGGGLLGSW*RCARWR
Trigger: ACGCCACCGCGCGCACCGGCACCAGGATCCGAGCAA...ACCACCACCCTGACCAAGACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR GCA 90 bp CCTGCTGCATGCAGGCGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTCTTTTGCTCGGATCCTGGTaGCGGTGCGCGCGGTGGCGT +
Preference number: 4 (lower is better)
Translates to: PAACRRLSGHGAASTSGLLLGSW*RCARWR
Trigger: ACGCCACCGCGCGCACCGGCACCAGGATCCGAGCAA...AAGACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACGCCTGCATGCAGCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR GCA 90 bp GTGCAGCTAGCACCAGTGGTCTTGGTCAGGGTGGTGGTAGCTGTGCCGTGCTCGCGCCGGCGCACTCCTTaGTCGGATCCTGGTGCCGGT +
Preference number: 4 (lower is better)
Translates to: VQLAPVVLVRVVVAVPCSRRRTP*SDPGAG
Trigger: ACCGGCACCAGGATCCGAGCAAGGAGTGCGCCGGCG...CGAGCACGGCACAGCTACCACCACCCTGACCAAGACCACTGGTGCTAGCTGCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR GCA 90 bp TTGGTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGCCACCCGAGCTGAGTCCCAGTCCTGGGCGAGTCTGTaGGCACTGGGTCCTCAGCAG +
Preference number: 4 (lower is better)
Translates to: LVRVVVAVPCSATRAESQSWASL*ALGPQQ
Trigger: CTGCTGAGGACCCAGTGCGCACAGACTCGCCCAGGA...CTGGGACTCAGCTCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGACCAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR GCA 90 bp TGGCGCCAGGACAGTGCTGGGCATCAGGTGCCCGGCCTCAGTGGCAGGAGCCGTAGATGGACAGCTCCATaGGGTACCCAGGGCTTGGAC +
Preference number: 4 (lower is better)
Translates to: WRQDSAGHQVPGLSGRSRRWTAP*GTQGLD
Trigger: GTCCAAGCCCTGGGTACCGCATGGAGCTGTCCATCT...ACGGCTCCTGCCACTGAGGCCGGGCACCTGATGCCCAGCACTGTCCTGGCGCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp CCCCTCCGTCCCGAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCAGGCCTCCAGGAGCCTaGTGCATCTGGTCTCTGGTG +
Preference number: 4 (lower is better)
Translates to: PLRPEVSAHFQVGPASLCRPPGA*CIWSLV
Trigger: CACCAGAGACCAGATGCAGCAGGCTCCTGGAGGCCT...GCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTCGGGACGGAGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGCCACCCGAGCTGAGTCCCAGGGTACAGCCGGCTGTGTCTaGTCCAGGGTGGCCTTCAGA +
Preference number: 4 (lower is better)
Translates to: VRVVVAVPCSATRAESQGTAGCV*SRVAFR
Trigger: TCTGAAGGCCACCCTGGAGCAGACACAGCCGGCTGT...ACCCTGGGACTCAGCTCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR GCA 90 bp GCTGAGTCCCAGGGTGCAGTGGTAACCGTTGGGCACGCGGCGGAGAGGGTGAGAGGCGGTCCGGGGTGGTaGTGCAAAGATGAGTCCCAC +
Preference number: 4 (lower is better)
Translates to: AESQGAVVTVGHAAERVRGGPGW*CKDESH
Trigger: GTGGGACTCATCTTTGCAGCACCACCCCGGACCGCC...TCTCACCCTCTCCGCCGCGTGCCCAACGGTTACCACTGCACCCTGGGACTCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR GCA 90 bp GCGGTCACGGTGCAGCTAGCACCAGTGGTCTTGGTCAGGGTGGTGGTAGCTGTGCGGTGGTGGTGGTGGTaGGACGACGCCTGGCTAGGG +
Preference number: 4 (lower is better)
Translates to: AVTVQLAPVVLVRVVVAVRWWWW*DDAWLG
Trigger: CCCTAGCCAGGCGTCGTCGCACCACCACCACCACCG...CACAGCTACCACCACCCTGACCAAGACCACTGGTGCTAGCTGCACCGTGACCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR GCA 90 bp GCCCGGCCTCAGTGGCAGGAGCCGTGTCCTCCCTCGGTCACTTGCTCTGAGTTTTCTGCTTCCTGTCCCTaGGGCGGTGGCAGCGGTGGT +
Preference number: 4 (lower is better)
Translates to: ARPQWQEPCPPSVTCSEFSASCP*GGGSGG
Trigger: ACCACCGCTGCCACCGCCGCAGGGACAGGAAGCAGA...AAACTCAGAGCAAGTGACCGAGGGAGGACACGGCTCCTGCCACTGAGGCCGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGCCGGCCCCACAGCACTaGTTGGTGCGCCATCCATAT +
Preference number: 4 (lower is better)
Translates to: EVSAHFQVGPASLCRTATPAPQH*LVRHPY
Trigger: ATATGGATGGCGCACCAAGCAGTGCTGTGGGGCCGG...CGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCCCTTCCACTCGTGGGAGGAGGGAGGAGGATGAGGGCTaGCTCCGCTCCTGGGACCGG +
Preference number: 4 (lower is better)
Translates to: VVSCPVASLETPSTRGRREEDEG*LRSWDR
Trigger: CCGGTCCCAGGAGCGGAGGCAGCCCTCATCCTCCTC...CCTCCTCCCACGAGTGGAAGGGGTTTCCAAGGAAGCCACAGGGCAGCTGACCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp ACCCGAGCTGAGTCCCAGGGTGCAGTGGTAACCGTTGGGCACGCGGCGGAGAGGCTGAGGGGGTCTCTCTaGAGCAGGGCGTTGTGTTCG +
Preference number: 4 (lower is better)
Translates to: TRAESQGAVVTVGHAAERLRGSL*SRALCS
Trigger: CGAACACAACGCCCTGCTGCAGAGAGACCCCCTCAG...CCTCTCCGCCGCGTGCCCAACGGTTACCACTGCACCCTGGGACTCAGCTCGGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR GCA 90 bp GTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGCCACCCGAGCTGAGTCCCAGGGTCTGAGGGGGTCTCTCTaGAGCAGGGCGTTGTGTTCG +
Preference number: 4 (lower is better)
Translates to: VRVVVAVPCSATRAESQGLRGSL*SRALCS
Trigger: CGAACACAACGCCCTGCTGCAGAGAGACCCCCTCAG...ACCCTGGGACTCAGCTCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR GCA 90 bp CCCCTCCGTCCCGAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCTGAGGGGGTCTCTCTaGAGCAGGGCGTTGTGTTCG +
Preference number: 4 (lower is better)
Translates to: PLRPEVSAHFQVGPASLCLRGSL*SRALCS
Trigger: CGAACACAACGCCCTGCTGCAGAGAGACCCCCTCAG...GCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTCGGGACGGAGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp TGGCGCCAGGACAGTGCTGGGCATCAGGTGCCCGGCCTCAGTGGCAGGAGCCGTACTGGAACACACGCCTaGTGCATGCAGGCGTCTGAG +
Preference number: 4 (lower is better)
Translates to: WRQDSAGHQVPGLSGRSRTGTHA*CMQASE
Trigger: CTCAGACGCCTGCATGCAGCAGGCGTGTGTTCCAGT...ACGGCTCCTGCCACTGAGGCCGGGCACCTGATGCCCAGCACTGTCCTGGCGCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp CCCCTCCGTCCCGAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCTGACACTGGCGGGCTaGACAAGCCACGACTGTGTC +
Preference number: 4 (lower is better)
Translates to: PLRPEVSAHFQVGPASLCLTLAG*TSHDCV
Trigger: GACACAGTCGTGGCTTGTGCAGCCCGCCAGTGTCAG...GCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTCGGGACGGAGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp AGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGTCCACTGGCAAGGGCTTaGTACCTGGCTGCCATCGCG +
Preference number: 4 (lower is better)
Translates to: RSRRTFRWALLLCAARPRPLARA*YLAAIA
Trigger: CGCGATGGCAGCCAGGTAGCAAGCCCTTGCCAGTGG...ACGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCCCTTCCACTCGTGGGAGGAGGGGGCTTCCTCCCTCCTaGCCTGACGGCCCCACATCC +
Preference number: 4 (lower is better)
Translates to: VVSCPVASLETPSTRGRRGLPPS*PDGPTS
Trigger: GGATGTGGGGCCGTCAGGGCAGGAGGGAGGAAGCCC...CCTCCTCCCACGAGTGGAAGGGGTTTCCAAGGAAGCCACAGGGCAGCTGACCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp CCCCTCCGTCCCGAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCCTCACTTGACTGCCTaGTCCCTGTGTCTGGCGCCA +
Preference number: 4 (lower is better)
Translates to: PLRPEVSAHFQVGPASLCPHLTA*SLCLAP
Trigger: TGGCGCCAGACACAGGGAGCAGGCAGTCAAGTGAGG...GCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTCGGGACGGAGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGCCACCCGAGCTGAGTCCCAGGGTGCCAAAGTTGGGTCCTaGCCAGTACTCCCGGCACTC +
Preference number: 4 (lower is better)
Translates to: VRVVVAVPCSATRAESQGAKVGS*PVLPAL
Trigger: GAGTGCCGGGAGTACTGGCCAGGACCCAACTTTGGC...ACCCTGGGACTCAGCTCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp CCCCTCCGTCCCGAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCCCTCTCTCGCTCCTTaGCAAACTCCCCCGAGAGCA +
Preference number: 4 (lower is better)
Translates to: PLRPEVSAHFQVGPASLCPSLAP*QTPPRA
Trigger: TGCTCTCGGGGGAGTTTGCCAAGGAGCGAGAGAGGG...GCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTCGGGACGGAGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CACAGGAGCCTCACCAAGGTGGGCAAGGCCTCCCCCGAGGGCCGGCTGCCCCGTTTCTGCTCTTCTTGGTaGCCGCTCTCTTCAGCACGT +
Preference number: 4 (lower is better)
Translates to: HRSLTKVGKASPEGRLPRFCSSW*PLSSAR
Trigger: ACGTGCTGAAGAGAGCGGCCACCAAGAAGAGCAGAA...ACGGGGCAGCCGGCCCTCGGGGGAGGCCTTGCCCACCTTGGTGAGGCTCCTGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CCACGTGAAGGGTGCTCCCCACAGGACGCAGAGCTCCTCACAACGGCTCCAAGCACACCGAGCGCGCCTTaGCCGAGTTCTGCTGCCTGG +
Preference number: 4 (lower is better)
Translates to: PREGCSPQDAELLTTAPSTPSAP*PSSAAW
Trigger: CCAGGCAGCAGAACTCGGCCAAGGCGCGCTCGGTGT...GCTTGGAGCCGTTGTGAGGAGCTCTGCGTCCTGTGGGGAGCACCCTTCACGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GCCCGGCCTCAGTGGCAGGAGCCGTGTCCTCCCTCGGTCACTTGCTCTGAGTTTACACCGAGCGCGCCTTaGCCGAGTTCTGCTGCCTGG +
Preference number: 4 (lower is better)
Translates to: ARPQWQEPCPPSVTCSEFTPSAP*PSSAAW
Trigger: CCAGGCAGCAGAACTCGGCCAAGGCGCGCTCGGTGT...AAACTCAGAGCAAGTGACCGAGGGAGGACACGGCTCCTGCCACTGAGGCCGGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CCCGAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGGCAGCCGTAGCTGGCTaGCCCGCTGCTCCCACACCG +
Preference number: 4 (lower is better)
Translates to: PEGRLPRVDDKTHPLEHTAAVAG*PAAPTP
Trigger: CGGTGTGGGAGCAGCGGGCCAGCCAGCTACGGCTGC...CGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTCGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GCTTGCCTGAGTGAGCATTCGCTGACACTGGCGGGCTGCACAAGCCACGACTGTGCAGCCGTAGCTGGCTaGCCCGCTGCTCCCACACCG +
Preference number: 4 (lower is better)
Translates to: ACLSEHSLTLAGCTSHDCAAVAG*PAAPTP
Trigger: CGGTGTGGGAGCAGCGGGCCAGCCAGCTACGGCTGC...ACAGTCGTGGCTTGTGCAGCCCGCCAGTGTCAGCGAATGCTCACTCAGGCAAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CCACGTGAAGGGTGCTCCCCACAGGACGCAGAGCTCCTCACAACGGCTCCAAGCTTCTGCAGCCGTAGCTaGCTGGCCCGCTGCTCCCAC +
Preference number: 4 (lower is better)
Translates to: PREGCSPQDAELLTTAPSFCSRS*LARCSH
Trigger: GTGGGAGCAGCGGGCCAGCCAGCTACGGCTGCAGAA...GCTTGGAGCCGTTGTGAGGAGCTCTGCGTCCTGTGGGGAGCACCCTTCACGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GCTGCATGCAGGCGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTCTTGGTATGTCGGGCCGCAGGTaGCGCGTAGTGGCGAAGCGC +
Preference number: 4 (lower is better)
Translates to: AACRRLSGHGAASTSGLGMSGRR*RVVAKR
Trigger: GCGCTTCGCCACTACGCGCCACCTGCGGCCCGACAT...ACCAAGACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACGCCTGCATGCAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp TCCAGGGAGGACAGAGCTTGCCTGAGTGAGCATTCGCTGACACTGGCGGGCTGCATGTCGGGCCGCAGGTaGCGCGTAGTGGCGAAGCGC +
Preference number: 4 (lower is better)
Translates to: SREDRACLSEHSLTLAGCMSGRR*RVVAKR
Trigger: GCGCTTCGCCACTACGCGCCACCTGCGGCCCGACAT...GCAGCCCGCCAGTGTCAGCGAATGCTCACTCAGGCAAGCTCTGTCCTCCCTGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CGGTTTAGGGTCTGGTGTGTGGTACGAGACCCAGGAAGGCAGGACAGGAAGGGGTTGTCGCGGTGCCGGTaGTGCCTGCGCGGAGGGTCG +
Preference number: 4 (lower is better)
Translates to: RFRVWCVVRDPGRQDRKGLSRCR*CLRGGS
Trigger: CGACCCTCCGCGCAGGCACCACCGGCACCGCGACAA...CCCCTTCCTGTCCTGCCTTCCTGGGTCTCGTACCACACACCAGACCCTAAACCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp TTGGTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGCCACCCGAGCTGAGTCCCAGCTCCAGGTCACAGTGTaGCTCCCGGGGCTGGTGGTT +
Preference number: 4 (lower is better)
Translates to: LVRVVVAVPCSATRAESQLQVTV*LPGLVV
Trigger: AACCACCAGCCCCGGGAGCCACACTGTGACCTGGAG...CTGGGACTCAGCTCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGACCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp CACAGGAGCCTCACCAAGGTGGGCAAGGCCTCCCCCGAGGGCCGGCTGCCCCGTCCTGCTCCTCATAGGTaGCATCCACGGAGTGTTTCA +
Preference number: 4 (lower is better)
Translates to: HRSLTKVGKASPEGRLPRPAPHR*HPRSVS
Trigger: TGAAACACTCCGTGGATGCCACCTATGAGGAGCAGG...ACGGGGCAGCCGGCCCTCGGGGGAGGCCTTGCCCACCTTGGTGAGGCTCCTGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CCCCTCCGTCCCGAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCGTGGCCTTCAGAGGGTaGAACAGGGACACAGGACCC +
Preference number: 4 (lower is better)
Translates to: PLRPEVSAHFQVGPASLCVAFRG*NRDTGP
Trigger: GGGTCCTGTGTCCCTGTTCCACCCTCTGAAGGCCAC...GCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTCGGGACGGAGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp TGGCGCCAGGACAGTGCTGGGCATCAGGTGCCCGGCCTCAGTGGCAGGAGCCGTGTGTCTGCTCCAGGGTaGCCTTCAGAGGGTGGAACA +
Preference number: 4 (lower is better)
Translates to: WRQDSAGHQVPGLSGRSRVSAPG*PSEGGT
Trigger: TGTTCCACCCTCTGAAGGCCACCCTGGAGCAGACAC...ACGGCTCCTGCCACTGAGGCCGGGCACCTGATGCCCAGCACTGTCCTGGCGCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CCCGAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGGCCACGCTCCAGGGGTaGCCTGGCCTCATGGGGTGC +
Preference number: 4 (lower is better)
Translates to: PEGRLPRVDDKTHPLEHTATLQG*PGLMGC
Trigger: GCACCCCATGAGGCCAGGCCACCCCTGGAGCGTGGC...CGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTCGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GCCCGGCCTCAGTGGCAGGAGCCGTGTCCTCCCTCGGTCACTTGCTCTGAGTTTGCCGCTGGGCCAGCGTaGAGATGGAGCGCTTCATGG +
Preference number: 4 (lower is better)
Translates to: ARPQWQEPCPPSVTCSEFAAGPA*RWSASW
Trigger: CCATGAAGCGCTCCATCTCCACGCTGGCCCAGCGGC...AAACTCAGAGCAAGTGACCGAGGGAGGACACGGCTCCTGCCACTGAGGCCGGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GCTGAGTCCCAGGGTGCAGTGGTAACCGTTGGGCACGCGGCGGAGAGGGTGAGAGTGGGCGGTCCGGGGTaGTGCTGCAAAGATGAGTCC +
Preference number: 4 (lower is better)
Translates to: AESQGAVVTVGHAAERVRVGGPG*CCKDES
Trigger: GGACTCATCTTTGCAGCACCACCCCGGACCGCCCAC...TCTCACCCTCTCCGCCGCGTGCCCAACGGTTACCACTGCACCCTGGGACTCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp ACGCCTGCTGCATGCAGGCGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTCAGCGGTGGTGGTGGTaGTGCGACGACGCCTGGCTA +
Preference number: 4 (lower is better)
Translates to: TPAACRRLSGHGAASTSGQRWWW*CDDAWL
Trigger: TAGCCAGGCGTCGTCGCACCACCACCACCACCGCTG...ACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACGCCTGCATGCAGCAGGCGT
66% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp GCTGAGTCCCAGGGTGCAGTGGTAACCGTTGGGCACGCGGCGGAGAGGGTGAGAAGCTGTTGGCGACGTTaGGTGGCTGCTGAGGGAGGG +
Preference number: 4 (lower is better)
Translates to: AESQGAVVTVGHAAERVRSCWRR*VAAEGG
Trigger: CCCTCCCTCAGCAGCCACCCAACGTCGCCAACAGCT...TCTCACCCTCTCCGCCGCGTGCCCAACGGTTACCACTGCACCCTGGGACTCAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp GCACCAGTGGTCTTGGTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGCCACCCGAAGCGGCCCGAGTTGGTaGCCACAGCCTCCTCGAAAG +
Preference number: 4 (lower is better)
Translates to: APVVLVRVVVAVPCSATRSGPSW*PQPPRK
Trigger: CTTTCGAGGAGGCTGTGGCCACCAACTCGGGCCGCT...TCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGACCAAGACCACTGGTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp AGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGTAGCGGCCCGAGTTGGTaGCCACAGCCTCCTCGAAAG +
Preference number: 4 (lower is better)
Translates to: RSRRTFRWALLLCAARPRSGPSW*PQPPRK
Trigger: CTTTCGAGGAGGCTGTGGCCACCAACTCGGGCCGCT...ACGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CCACGTGAAGGGTGCTCCCCACAGGACGCAGAGCTCCTCACAACGGCTCCAAGCAGGAGCGGCCCGAGTTaGTGGCCACAGCCTCCTCGA +
Preference number: 4 (lower is better)
Translates to: PREGCSPQDAELLTTAPSRSGPS*WPQPPR
Trigger: TCGAGGAGGCTGTGGCCACCAACTCGGGCCGCTCCT...GCTTGGAGCCGTTGTGAGGAGCTCTGCGTCCTGTGGGGAGCACCCTTCACGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CCCGAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGGGAGTCAGGGGCGTCTaGGGGAGCTGCCTCCGCCCA +
Preference number: 4 (lower is better)
Translates to: PEGRLPRVDDKTHPLEHTGVRGV*GSCLRP
Trigger: TGGGCGGAGGCAGCTCCCCCAGACGCCCCTGACTCC...CGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTCGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp AGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGTCTGGGTGTGAGGGCCTaGCGGTCAGGCACTTGGTCA +
Preference number: 4 (lower is better)
Translates to: RSRRTFRWALLLCAARPRLGVRA*RSGTWS
Trigger: TGACCAAGTGCCTGACCGCCAGGCCCTCACACCCAG...ACGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GCTTGCCTGAGTGAGCATTCGCTGACACTGGCGGGCTGCACAAGCCACGACTGTGGTGCCCGGCCTCAGTaGCAGGAGCCGTGTCCTCCC +
Preference number: 4 (lower is better)
Translates to: ACLSEHSLTLAGCTSHDCGARPQ*QEPCPP
Trigger: GGGAGGACACGGCTCCTGCCACTGAGGCCGGGCACC...ACAGTCGTGGCTTGTGCAGCCCGCCAGTGTCAGCGAATGCTCACTCAGGCAAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp ACCCGAGCTGAGTCCCAGGGTGCAGTGGTAACCGTTGGGCACGCGGCGGAGAGGTGGCAAGGATCCCTGTaGGGACGACCACGAAGTCCA +
Preference number: 4 (lower is better)
Translates to: TRAESQGAVVTVGHAAERWQGSL*GRPRSP
Trigger: TGGACTTCGTGGTCGTCCTCACAGGGATCCTTGCCA...CCTCTCCGCCGCGTGCCCAACGGTTACCACTGCACCCTGGGACTCAGCTCGGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR TCA 90 bp CCCCTCCGTCCCGAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCTGGCAAGGATCCCTGTaGGGACGACCACGAAGTCCA +
Preference number: 4 (lower is better)
Translates to: PLRPEVSAHFQVGPASLCWQGSL*GRPRSP
Trigger: TGGACTTCGTGGTCGTCCTCACAGGGATCCTTGCCA...GCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTCGGGACGGAGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp CCCGAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCTGTCTTCCCGCTCTTaGGGCTGGCGCGGGCGAAGG +
Preference number: 4 (lower is better)
Translates to: PEGRLPRVDDKTHPLEHTLSSRS*GWRGRR
Trigger: CCTTCGCCCGCGCCAGCCTCAAGAGCGGGAAGACAG...CGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GTGCAGCTAGCACCAGTGGTCTTGGTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGGGCCCGCAGCACACTaGTCCCAAAGGAGCTTCCCG +
Preference number: 4 (lower is better)
Translates to: VQLAPVVLVRVVVAVPCSGPAAH*SQRSFP
Trigger: CGGGAAGCTCCTTTGGGATCAGTGTGCTGCGGGCCC...CGAGCACGGCACAGCTACCACCACCCTGACCAAGACCACTGGTGCTAGCTGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR TCA 90 bp GCTGAGTCCCAGGGTGCAGTGGTAACCGTTGGGCACGCGGCGGAGAGGGTGAGAGGATCTGGAAGACAGTaGGGATGGCGGCAGGGAAGG +
Preference number: 4 (lower is better)
Translates to: AESQGAVVTVGHAAERVRGSGRQ*GWRQGR
Trigger: CCTTCCCTGCCGCCATCCTCACTGTCTTCCAGATCC...TCTCACCCTCTCCGCCGCGTGCCCAACGGTTACCACTGCACCCTGGGACTCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR TCA 90 bp CACAGGAGCCTCACCAAGGTGGGCAAGGCCTCCCCCGAGGGCCGGCTGCCCCGTTGCGATTCGATCCCGTaGTACATCACTGCATTCCAG +
Preference number: 4 (lower is better)
Translates to: HRSLTKVGKASPEGRLPRCDSIP*YITAFQ
Trigger: CTGGAATGCAGTGATGTATCACGGGATCGAATCGCA...ACGGGGCAGCCGGCCCTCGGGGGAGGCCTTGCCCACCTTGGTGAGGCTCCTGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GCCCGGCCTCAGTGGCAGGAGCCGTGTCCTCCCTCGGTCACTTGCTCTGAGTTTTTCTCCACAGCCTCGTaGGCAGGCTGCGCCTTGTGC +
Preference number: 4 (lower is better)
Translates to: ARPQWQEPCPPSVTCSEFFSTAS*AGCALC
Trigger: GCACAAGGCGCAGCCTGCTCACGAGGCTGTGGAGAA...AAACTCAGAGCAAGTGACCGAGGGAGGACACGGCTCCTGCCACTGAGGCCGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGCCACCCGAGCTGAGTCCCAGGGTCGAGTGACGTTCCGCTaGTTGTCTGCATCCTCTGGC +
Preference number: 4 (lower is better)
Translates to: VRVVVAVPCSATRAESQGRVTFR*LSASSG
Trigger: GCCAGAGGATGCAGACAATCAGCGGAACGTCACTCG...ACCCTGGGACTCAGCTCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR TCA 90 bp GAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGGACTGCCCATGCGAGTaGCGTTCCGCTGATTGTCTG +
Preference number: 4 (lower is better)
Translates to: EVSAHFQVGPASLCRTATDCPCE*RSADCL
Trigger: CAGACAATCAGCGGAACGTCACTCGCATGGGCAGTC...CGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GCTGCATGCAGGCGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTCTTGGTTTCGGGTCTGGGGGCTaGCTGCCCATGCGAGTGACG +
Preference number: 4 (lower is better)
Translates to: AACRRLSGHGAASTSGLGFGSGG*LPMRVT
Trigger: CGTCACTCGCATGGGCAGTCAGCCCCCAGACCCGAA...ACCAAGACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACGCCTGCATGCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR TCA 90 bp CACAGGAGCCTCACCAAGGTGGGCAAGGCCTCCCCCGAGGGCCGGCTGCCCCGTTTTCCCTTTGGATCCTaGGAAAGCAAACGCCACCAG +
Preference number: 4 (lower is better)
Translates to: HRSLTKVGKASPEGRLPRFPFGS*ESKRHQ
Trigger: CTGGTGGCGTTTGCTTTCTCAGGATCCAAAGGGAAA...ACGGGGCAGCCGGCCCTCGGGGGAGGCCTTGCCCACCTTGGTGAGGCTCCTGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp TGGCGCCAGGACAGTGCTGGGCATCAGGTGCCCGGCCTCAGTGGCAGGAGCCGTGCACCCCAAAGGCGATaGTCTTCAGCACGCATTCCA +
Preference number: 4 (lower is better)
Translates to: WRQDSAGHQVPGLSGRSRAPQRR*SSARIP
Trigger: TGGAATGCGTGCTGAAGATCATCGCCTTTGGGGTGC...ACGGCTCCTGCCACTGAGGCCGGGCACCTGATGCCCAGCACTGTCCTGGCGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp CCTGCTGCATGCAGGCGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTCTTCCTGGCGGAGCAGCTTaGTCAGCCGCGCAGCTCGAA +
Preference number: 4 (lower is better)
Translates to: PAACRRLSGHGAASTSGLPGGAA*SAAQLE
Trigger: TTCGAGCTGCGCGGCTGATCAAGCTGCTCCGCCAGG...AAGACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACGCCTGCATGCAGCAGG
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR TCA 90 bp TCCAGGGAGGACAGAGCTTGCCTGAGTGAGCATTCGCTGACACTGGCGGGCTGCCCTGGCGGAGCAGCTTaGTCAGCCGCGCAGCTCGAA +
Preference number: 4 (lower is better)
Translates to: SREDRACLSEHSLTLAGCPGGAA*SAAQLE
Trigger: TTCGAGCTGCGCGGCTGATCAAGCTGCTCCGCCAGG...GCAGCCCGCCAGTGTCAGCGAATGCTCACTCAGGCAAGCTCTGTCCTCCCTGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp TGGCGCCAGGACAGTGCTGGGCATCAGGTGCCCGGCCTCAGTGGCAGGAGCCGTAACTCCGCGTCACACTaGTGCTGCTTTGTCCCAGCT +
Preference number: 4 (lower is better)
Translates to: WRQDSAGHQVPGLSGRSRNSASH*CCFVPA
Trigger: AGCTGGGACAAAGCAGCATCAGTGTGACGCGGAGTT...ACGGCTCCTGCCACTGAGGCCGGGCACCTGATGCCCAGCACTGTCCTGGCGCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GCGGTCACGGTGCAGCTAGCACCAGTGGTCTTGGTCAGGGTGGTGGTAGCTGTGACGTTGGGTGGCTGCTaGGGGAGGGCTTGGGCTTCG +
Preference number: 4 (lower is better)
Translates to: AVTVQLAPVVLVRVVVAVTLGGC*GRAWAS
Trigger: CGAAGCCCAAGCCCTCCCTCAGCAGCCACCCAACGT...CACAGCTACCACCACCCTGACCAAGACCACTGGTGCTAGCTGCACCGTGACCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR TCA 90 bp GCTGAGTCCCAGGGTGCAGTGGTAACCGTTGGGCACGCGGCGGAGAGGGTGAGACAGCCTCCTCGAAAGTaGGAGTGTCCTCAGGCAGGG +
Preference number: 4 (lower is better)
Translates to: AESQGAVVTVGHAAERVRQPPRK*ECPQAG
Trigger: CCCTGCCTGAGGACACTCTCACTTTCGAGGAGGCTG...TCTCACCCTCTCCGCCGCGTGCCCAACGGTTACCACTGCACCCTGGGACTCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR TCA 90 bp CGGTTTAGGGTCTGGTGTGTGGTACGAGACCCAGGAAGGCAGGACAGGAAGGGGCTCGGCCACCCGAGCTaGGTCCCAGGGTGCAGTGGT +
Preference number: 4 (lower is better)
Translates to: RFRVWCVVRDPGRQDRKGLGHPS*VPGCSG
Trigger: ACCACTGCACCCTGGGACTCAGCTCGGGTGGCCGAG...CCCCTTCCTGTCCTGCCTTCCTGGGTCTCGTACCACACACCAGACCCTAAACCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GCTTGCCTGAGTGAGCATTCGCTGACACTGGCGGGCTGCACAAGCCACGACTGTCTCGGCCACCCGAGCTaGGTCCCAGGGTGCAGTGGT +
Preference number: 4 (lower is better)
Translates to: ACLSEHSLTLAGCTSHDCLGHPS*VPGCSG
Trigger: ACCACTGCACCCTGGGACTCAGCTCGGGTGGCCGAG...ACAGTCGTGGCTTGTGCAGCCCGCCAGTGTCAGCGAATGCTCACTCAGGCAAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GCCCGGCCTCAGTGGCAGGAGCCGTGTCCTCCCTCGGTCACTTGCTCTGAGTTTCTGCATGCAGGCGTCTaGGCGGTCACGGTGCAGCTA +
Preference number: 4 (lower is better)
Translates to: ARPQWQEPCPPSVTCSEFLHAGV*AVTVQL
Trigger: TAGCTGCACCGTGACCGCTCAGACGCCTGCATGCAG...AAACTCAGAGCAAGTGACCGAGGGAGGACACGGCTCCTGCCACTGAGGCCGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp TGGCGCCAGGACAGTGCTGGGCATCAGGTGCCCGGCCTCAGTGGCAGGAGCCGTGCTAGCACCAGATGTTaGCAGCAAGGGGCTCCCATT +
Preference number: 4 (lower is better)
Translates to: WRQDSAGHQVPGLSGRSRASTRC*QQGAPI
Trigger: AATGGGAGCCCCTTGCTGTCAACATCTGGTGCTAGC...ACGGCTCCTGCCACTGAGGCCGGGCACCTGATGCCCAGCACTGTCCTGGCGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp TGGCGCCAGGACAGTGCTGGGCATCAGGTGCCCGGCCTCAGTGGCAGGAGCCGTCTCGGTCACTTGCTCTaGGTTTCATTCCAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: WRQDSAGHQVPGLSGRSRLGHLL*VSFQLG
Trigger: CCCCAGCTGGAATGAAACTCAGAGCAAGTGACCGAG...ACGGCTCCTGCCACTGAGGCCGGGCACCTGATGCCCAGCACTGTCCTGGCGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp AGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGTGGGTCAGACCTCACTTaGCTGCCTGCTCCCTGTGTC +
Preference number: 4 (lower is better)
Translates to: RSRRTFRWALLLCAARPRGSDLT*LPAPCV
Trigger: GACACAGGGAGCAGGCAGTCAAGTGAGGTCTGACCC...ACGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GCGGTCACGGTGCAGCTAGCACCAGTGGTCTTGGTCAGGGTGGTGGTAGCTGTGGGGCTGGGGCCTCCTTaGCACAGGGGAAGTCACCCA +
Preference number: 4 (lower is better)
Translates to: AVTVQLAPVVLVRVVVAVGLGPP*HRGSHP
Trigger: TGGGTGACTTCCCCTGTGGCAAGGAGGCCCCAGCCC...CACAGCTACCACCACCCTGACCAAGACCACTGGTGCTAGCTGCACCGTGACCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR GCA 90 bp CCACGTGAAGGGTGCTCCCCACAGGACGCAGAGCTCCTCACAACGGCTCCAAGCTCTCGCTCGATCTGCTaGTGCCGGCGCAGCTTCAGG +
Preference number: 4 (lower is better)
Translates to: PREGCSPQDAELLTTAPSSRSIC*CRRSFR
Trigger: CCTGAAGCTGCGCCGGCAGCAGCAGATCGAGCGAGA...GCTTGGAGCCGTTGTGAGGAGCTCTGCGTCCTGTGGGGAGCACCCTTCACGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGAGGGGACTTCTCCTCTaGATTCCTGTCCTCCTCGGC +
Preference number: 4 (lower is better)
Translates to: EVSAHFQVGPASLCRTATRGLLL*IPVLLG
Trigger: GCCGAGGAGGACAGGAATGCAGAGGAGAAGTCCCCT...CGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GCTTGCCTGAGTGAGCATTCGCTGACACTGGCGGGCTGCACAAGCCACGACTGTTTGCTCGGATCCTGGTaGCGGTGCGCGCGGTGGCGT +
Preference number: 4 (lower is better)
Translates to: ACLSEHSLTLAGCTSHDCLLGSW*RCARWR
Trigger: ACGCCACCGCGCGCACCGGCACCAGGATCCGAGCAA...ACAGTCGTGGCTTGTGCAGCCCGCCAGTGTCAGCGAATGCTCACTCAGGCAAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp ACCCGAGCTGAGTCCCAGGGTGCAGTGGTAACCGTTGGGCACGCGGCGGAGAGGGTGCTGGGCAGTGTGTaGATGGGACCCACAGTCACA +
Preference number: 4 (lower is better)
Translates to: TRAESQGAVVTVGHAAERVLGSV*MGPTVT
Trigger: TGTGACTGTGGGTCCCATGCACACACTGCCCAGCAC...CCTCTCCGCCGCGTGCCCAACGGTTACCACTGCACCCTGGGACTCAGCTCGGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR GCA 90 bp GAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGGTGCTGGGCAGTGTGTaGATGGGACCCACAGTCACA +
Preference number: 4 (lower is better)
Translates to: EVSAHFQVGPASLCRTATVLGSV*MGPTVT
Trigger: TGTGACTGTGGGTCCCATGCACACACTGCCCAGCAC...CGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGCCTTCTGGAGACAGGTaGTGGGCAGTGTGTGCATGG +
Preference number: 4 (lower is better)
Translates to: EVSAHFQVGPASLCRTATPSGDR*WAVCAW
Trigger: CCATGCACACACTGCCCAGCACCTGTCTCCAGAAGG...CGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp ACCCGAGCTGAGTCCCAGGGTGCAGTGGTAACCGTTGGGCACGCGGCGGAGAGGCAGCTTGATCTCCAGTaGCGTCCGGATGAGGGCCAT +
Preference number: 4 (lower is better)
Translates to: TRAESQGAVVTVGHAAERQLDLQ*RPDEGH
Trigger: ATGGCCCTCATCCGGACGGCACTGGAGATCAAGCTG...CCTCTCCGCCGCGTGCCCAACGGTTACCACTGCACCCTGGGACTCAGCTCGGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR GCA 90 bp GCTGTGCCGTGCTCGGCCACCCGAGCTGAGTCCCAGGGTGCAGTGGTAACCGTTAGGCCTCCAGGAGCCTaGTGCATCTGGTCTCTGGTG +
Preference number: 4 (lower is better)
Translates to: AVPCSATRAESQGAVVTVRPPGA*CIWSLV
Trigger: CACCAGAGACCAGATGCAGCAGGCTCCTGGAGGCCT...AACGGTTACCACTGCACCCTGGGACTCAGCTCGGGTGGCCGAGCACGGCACAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR GCA 90 bp GTCTTGGTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGCCACCCGAGCTGAGTCCACAGCCGGCTGTGTCTaGTCCAGGGTGGCCTTCAGA +
Preference number: 4 (lower is better)
Translates to: VLVRVVVAVPCSATRAESTAGCV*SRVAFR
Trigger: TCTGAAGGCCACCCTGGAGCAGACACAGCCGGCTGT...GGACTCAGCTCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGACCAAGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR GCA 90 bp CCACGTGAAGGGTGCTCCCCACAGGACGCAGAGCTCCTCACAACGGCTCCAAGCGGCGGTCCGGGGTGGTaGTGCAAAGATGAGTCCCAC +
Preference number: 4 (lower is better)
Translates to: PREGCSPQDAELLTTAPSGGPGW*CKDESH
Trigger: GTGGGACTCATCTTTGCAGCACCACCCCGGACCGCC...GCTTGGAGCCGTTGTGAGGAGCTCTGCGTCCTGTGGGGAGCACCCTTCACGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GCTTGCCTGAGTGAGCATTCGCTGACACTGGCGGGCTGCACAAGCCACGACTGTCGGTGGTGGTGGTGGTaGGACGACGCCTGGCTAGGG +
Preference number: 4 (lower is better)
Translates to: ACLSEHSLTLAGCTSHDCRWWWW*DDAWLG
Trigger: CCCTAGCCAGGCGTCGTCGCACCACCACCACCACCG...ACAGTCGTGGCTTGTGCAGCCCGCCAGTGTCAGCGAATGCTCACTCAGGCAAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp CGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTCTTGGTCAGGGTGGTGGTTCTGCTTCCTGTCCCTaGGGCGGTGGCAGCGGTGGT +
Preference number: 4 (lower is better)
Translates to: RLSGHGAASTSGLGQGGGSASCP*GGGSGG
Trigger: ACCACCGCTGCCACCGCCGCAGGGACAGGAAGCAGA...ACCACCACCCTGACCAAGACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR GCA 90 bp TCGGCCACCCGAGCTGAGTCCCAGGGTGCAGTGGTAACCGTTGGGCACGCGGCGCACAGCACTGCTTGGTaGGCCATCCATATCGGCAGA +
Preference number: 4 (lower is better)
Translates to: SATRAESQGAVVTVGHAAHSTAW*AIHIGR
Trigger: TCTGCCGATATGGATGGCGCACCAAGCAGTGCTGTG...CGCCGCGTGCCCAACGGTTACCACTGCACCCTGGGACTCAGCTCGGGTGGCCGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR GCA 90 bp TTGGTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGCCACCCGAGCTGAGTCCCAGCCGGCCCCACAGCACTaGTTGGTGCGCCATCCATAT +
Preference number: 4 (lower is better)
Translates to: LVRVVVAVPCSATRAESQPAPQH*LVRHPY
Trigger: ATATGGATGGCGCACCAAGCAGTGCTGTGGGGCCGG...CTGGGACTCAGCTCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGACCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR GCA 90 bp GCGGTCACGGTGCAGCTAGCACCAGTGGTCTTGGTCAGGGTGGTGGTAGCTGTGGTGGTAGCTGTGCCGTaGTCGGCCACCCGAGCTGAG +
Preference number: 4 (lower is better)
Translates to: AVTVQLAPVVLVRVVVAVVVAVP*SATRAE
Trigger: CTCAGCTCGGGTGGCCGAGCACGGCACAGCTACCAC...CACAGCTACCACCACCCTGACCAAGACCACTGGTGCTAGCTGCACCGTGACCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR GCA 90 bp ACGCCTGCTGCATGCAGGCGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTCACACGCCTGCTGCATaGAGGCGTCTGAGCGGTCAC +
Preference number: 4 (lower is better)
Translates to: TPAACRRLSGHGAASTSGHTPAA*RRLSGH
Trigger: GTGACCGCTCAGACGCCTGCATGCAGCAGGCGTGTG...ACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACGCCTGCATGCAGCAGGCGT
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR GCA 90 bp GCCCGGCCTCAGTGGCAGGAGCCGTGTCCTCCCTCGGTCACTTGCTCTGAGTTTTGGACCGGACAGGGCTaGACAGGGAGTCTCCTCGCA +
Preference number: 4 (lower is better)
Translates to: ARPQWQEPCPPSVTCSEFWTGQG*TGSLLA
Trigger: TGCGAGGAGACTCCCTGTGCAGCCCTGTCCGGTCCA...AAACTCAGAGCAAGTGACCGAGGGAGGACACGGCTCCTGCCACTGAGGCCGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GCCCGGCCTCAGTGGCAGGAGCCGTGTCCTCCCTCGGTCACTTGCTCTGAGTTTCCACTGGCAAGGGCTTaGTACCTGGCTGCCATCGCG +
Preference number: 4 (lower is better)
Translates to: ARPQWQEPCPPSVTCSEFPLARA*YLAAIA
Trigger: CGCGATGGCAGCCAGGTAGCAAGCCCTTGCCAGTGG...AAACTCAGAGCAAGTGACCGAGGGAGGACACGGCTCCTGCCACTGAGGCCGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp CGGTTTAGGGTCTGGTGTGTGGTACGAGACCCAGGAAGGCAGGACAGGAAGGGGGGGCTTCCTCCCTCCTaGCCTGACGGCCCCACATCC +
Preference number: 4 (lower is better)
Translates to: RFRVWCVVRDPGRQDRKGGLPPS*PDGPTS
Trigger: GGATGTGGGGCCGTCAGGGCAGGAGGGAGGAAGCCC...CCCCTTCCTGTCCTGCCTTCCTGGGTCTCGTACCACACACCAGACCCTAAACCG
64% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGCTCGCACAGCCGGGCTaGGGCCTCCTTGCCACAGGG +
Preference number: 4 (lower is better)
Translates to: AGCPVWMIKLIHWNTRLLLAQPG*GLLATG
Trigger: CCCTGTGGCAAGGAGGCCCCAGCCCGGCTGTGCGAG...CAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp TTGGTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGCCACCCGAGCTGAGTCCCAGGCCAAAGTTGGGTCCTaGCCAGTACTCCCGGCACTC +
Preference number: 4 (lower is better)
Translates to: LVRVVVAVPCSATRAESQAKVGS*PVLPAL
Trigger: GAGTGCCGGGAGTACTGGCCAGGACCCAACTTTGGC...CTGGGACTCAGCTCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGACCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp ACGCCTGCTGCATGCAGGCGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTGCTGCCTGGCGGCGATaGAGATGTTCGCGGCAGACA +
Preference number: 4 (lower is better)
Translates to: TPAACRRLSGHGAASTSGAAWRR*RCSRQT
Trigger: TGTCTGCCGCGAACATCTCCATCGCCGCCAGGCAGC...ACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACGCCTGCATGCAGCAGGCGT
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp TTGGTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGCCACCCGAGCTGAGTCCCAGCCGAGTTCTGCTGCCTaGCGGCGATGGAGATGTTCG +
Preference number: 4 (lower is better)
Translates to: LVRVVVAVPCSATRAESQPSSAA*RRWRCS
Trigger: CGAACATCTCCATCGCCGCCAGGCAGCAGAACTCGG...CTGGGACTCAGCTCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGACCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp GAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCAGCCGTAGCTGGCTaGCCCGCTGCTCCCACACCG +
Preference number: 4 (lower is better)
Translates to: EGRLPRVDDKTHPLEHTPAAVAG*PAAPTP
Trigger: CGGTGTGGGAGCAGCGGGCCAGCCAGCTACGGCTGC...AGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GCTGCATGCAGGCGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTCTTGGTTTCTGCAGCCGTAGCTaGCTGGCCCGCTGCTCCCAC +
Preference number: 4 (lower is better)
Translates to: AACRRLSGHGAASTSGLGFCSRS*LARCSH
Trigger: GTGGGAGCAGCGGGCCAGCCAGCTACGGCTGCAGAA...ACCAAGACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACGCCTGCATGCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp CGGTTTAGGGTCTGGTGTGTGGTACGAGACCCAGGAAGGCAGGACAGGAAGGGGATGTCGGGCCGCAGGTaGCGCGTAGTGGCGAAGCGC +
Preference number: 4 (lower is better)
Translates to: RFRVWCVVRDPGRQDRKGMSGRR*RVVAKR
Trigger: GCGCTTCGCCACTACGCGCCACCTGCGGCCCGACAT...CCCCTTCCTGTCCTGCCTTCCTGGGTCTCGTACCACACACCAGACCCTAAACCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp ACCCGAGCTGAGTCCCAGGGTGCAGTGGTAACCGTTGGGCACGCGGCGGAGAGGTCTGGAGACAGGTGCTaGGCAGTGTGTGCATGGGAC +
Preference number: 4 (lower is better)
Translates to: TRAESQGAVVTVGHAAERSGDRC*AVCAWD
Trigger: GTCCCATGCACACACTGCCCAGCACCTGTCTCCAGA...CCTCTCCGCCGCGTGCCCAACGGTTACCACTGCACCCTGGGACTCAGCTCGGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp GCGGTCACGGTGCAGCTAGCACCAGTGGTCTTGGTCAGGGTGGTGGTAGCTGTGCACTGGGAACGACCGTaGCTTCCCCAAGAGGGCCCG +
Preference number: 4 (lower is better)
Translates to: AVTVQLAPVVLVRVVVAVHWERP*LPQEGP
Trigger: CGGGCCCTCTTGGGGAAGCCACGGTCGTTCCCAGTG...CACAGCTACCACCACCCTGACCAAGACCACTGGTGCTAGCTGCACCGTGACCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp TTGGTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGCCACCCGAGCTGAGTCCCAGGAACATGGAGCTGTATaGGACGATAGGCCGGGGGCC +
Preference number: 4 (lower is better)
Translates to: LVRVVVAVPCSATRAESQEHGAV*DDRPGA
Trigger: GGCCCCCGGCCTATCGTCCCATACAGCTCCATGTTC...CTGGGACTCAGCTCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGACCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp TCGGCCACCCGAGCTGAGTCCCAGGGTGCAGTGGTAACCGTTGGGCACGCGGCGGGCGGAGCAGGTTGGTaGGGCTTAAACAGAACATGG +
Preference number: 4 (lower is better)
Translates to: SATRAESQGAVVTVGHAAGGAGW*GLNRTW
Trigger: CCATGTTCTGTTTAAGCCCCACCAACCTGCTCCGCC...CGCCGCGTGCCCAACGGTTACCACTGCACCCTGGGACTCAGCTCGGGTGGCCGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp GCGGTCACGGTGCAGCTAGCACCAGTGGTCTTGGTCAGGGTGGTGGTAGCTGTGCGAGTCTGTGCGCACTaGGTCCTCAGCAGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: AVTVQLAPVVLVRVVVAVRVCAH*VLSSQG
Trigger: GCCCTGGCTGCTGAGGACCCAGTGCGCACAGACTCG...CACAGCTACCACCACCCTGACCAAGACCACTGGTGCTAGCTGCACCGTGACCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp TCCAGGGAGGACAGAGCTTGCCTGAGTGAGCATTCGCTGACACTGGCGGGCTGCCGAGTCTGTGCGCACTaGGTCCTCAGCAGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: SREDRACLSEHSLTLAGCRVCAH*VLSSQG
Trigger: GCCCTGGCTGCTGAGGACCCAGTGCGCACAGACTCG...GCAGCCCGCCAGTGTCAGCGAATGCTCACTCAGGCAAGCTCTGTCCTCCCTGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp ACCCGAGCTGAGTCCCAGGGTGCAGTGGTAACCGTTGGGCACGCGGCGGAGAGGAGTGTTTCAGCACCATaGGCCAGCCTTCTCCCGTGG +
Preference number: 4 (lower is better)
Translates to: TRAESQGAVVTVGHAAERSVSAP*ASLLPW
Trigger: CCACGGGAGAAGGCTGGCCCATGGTGCTGAAACACT...CCTCTCCGCCGCGTGCCCAACGGTTACCACTGCACCCTGGGACTCAGCTCGGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp CACAGGAGCCTCACCAAGGTGGGCAAGGCCTCCCCCGAGGGCCGGCTGCCCCGTCAGTCATGTCCTCGTTaGAGATGGGCATGTTCATGC +
Preference number: 4 (lower is better)
Translates to: HRSLTKVGKASPEGRLPRQSCPR*RWACSC
Trigger: GCATGAACATGCCCATCTCCAACGAGGACATGACTG...ACGGGGCAGCCGGCCCTCGGGGGAGGCCTTGCCCACCTTGGTGAGGCTCCTGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CACAGGAGCCTCACCAAGGTGGGCAAGGCCTCCCCCGAGGGCCGGCTGCCCCGTATCTCATCAGGCTTATaGGGTGGTACCAGCAAGTCC +
Preference number: 4 (lower is better)
Translates to: HRSLTKVGKASPEGRLPRISSGL*GGTSKS
Trigger: GGACTTGCTGGTACCACCCCATAAGCCTGATGAGAT...ACGGGGCAGCCGGCCCTCGGGGGAGGCCTTGCCCACCTTGGTGAGGCTCCTGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp ACGCCTGCTGCATGCAGGCGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTGACACAGGACCCATCTaGGAGAGGCCTCCAGGAGCC +
Preference number: 4 (lower is better)
Translates to: TPAACRRLSGHGAASTSGDTGPI*ERPPGA
Trigger: GGCTCCTGGAGGCCTCTCCCAGATGGGTCCTGTGTC...ACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACGCCTGCATGCAGCAGGCGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp GCACCAGTGGTCTTGGTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGCCACCCGAGTGGCCTTCAGAGGGTaGAACAGGGACACAGGACCC +
Preference number: 4 (lower is better)
Translates to: APVVLVRVVVAVPCSATRVAFRG*NRDTGP
Trigger: GGGTCCTGTGTCCCTGTTCCACCCTCTGAAGGCCAC...TCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGACCAAGACCACTGGTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp CCACGTGAAGGGTGCTCCCCACAGGACGCAGAGCTCCTCACAACGGCTCCAAGCGGTGGCCTGGCCTCATaGGGTGCATCCTGGGTCCTT +
Preference number: 4 (lower is better)
Translates to: PREGCSPQDAELLTTAPSGGLAS*GASWVL
Trigger: AAGGACCCAGGATGCACCCCATGAGGCCAGGCCACC...GCTTGGAGCCGTTGTGAGGAGCTCTGCGTCCTGTGGGGAGCACCCTTCACGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTCTTGGTCAGGGTGGTGGTGCTCCAGGGGTGGCCTaGCCTCATGGGGTGCATCCT +
Preference number: 4 (lower is better)
Translates to: RLSGHGAASTSGLGQGGGAPGVA*PHGVHP
Trigger: AGGATGCACCCCATGAGGCCAGGCCACCCCTGGAGC...ACCACCACCCTGACCAAGACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp CCTGCTGCATGCAGGCGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTCTTGGGATCTCTGTGGAGTaGCCACGCTCCAGGGGTGGC +
Preference number: 4 (lower is better)
Translates to: PAACRRLSGHGAASTSGLGISVE*PRSRGG
Trigger: GCCACCCCTGGAGCGTGGCCACTCCACAGAGATCCC...AAGACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACGCCTGCATGCAGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp GTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCCCTTCCACTCGTGGGAGGAGGGGGATCTCTGTGGAGTaGCCACGCTCCAGGGGTGGC +
Preference number: 4 (lower is better)
Translates to: VVSCPVASLETPSTRGRRGISVE*PRSRGG
Trigger: GCCACCCCTGGAGCGTGGCCACTCCACAGAGATCCC...CCTCCTCCCACGAGTGGAAGGGGTTTCCAAGGAAGCCACAGGGCAGCTGACCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTCTTGGTCAGGGTGGTGGTGCCGCTGGGCCAGCGTaGAGATGGAGCGCTTCATGG +
Preference number: 4 (lower is better)
Translates to: RLSGHGAASTSGLGQGGGAAGPA*RWSASW
Trigger: CCATGAAGCGCTCCATCTCCACGCTGGCCCAGCGGC...ACCACCACCCTGACCAAGACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp GCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGTGGTGCGACGACGCCTaGCTAGGGGGTGGGCGGTCC +
Preference number: 4 (lower is better)
Translates to: AGCPVWMIKLIHWNTRLLWCDDA*LGGGRS
Trigger: GGACCGCCCACCCCCTAGCCAGGCGTCGTCGCACCA...CAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CCCGAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGTGGCAGCGGTGGTGGTaGTGGTGCGACGACGCCTGG +
Preference number: 4 (lower is better)
Translates to: PEGRLPRVDDKTHPLEHTWQRWW*WCDDAW
Trigger: CCAGGCGTCGTCGCACCACCACCACCACCGCTGCCA...CGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTCGGTGGCAGCGGTGGTaGTGGTGGTGCGACGACGCC +
Preference number: 4 (lower is better)
Translates to: EGRLPRVDDKTHPLEHTPRWQRW*WWCDDA
Trigger: GGCGTCGTCGCACCACCACCACCACCGCTGCCACCG...AGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CCTGCTGCATGCAGGCGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTCTTAGGAGCGGCCCGAGTTaGTGGCCACAGCCTCCTCGA +
Preference number: 4 (lower is better)
Translates to: PAACRRLSGHGAASTSGLRSGPS*WPQPPR
Trigger: TCGAGGAGGCTGTGGCCACCAACTCGGGCCGCTCCT...AAGACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACGCCTGCATGCAGCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp CCACGTGAAGGGTGCTCCCCACAGGACGCAGAGCTCCTCACAACGGCTCCAAGCTGCAGTGGTAACCGTTaGGCACGCGGCGGAGAGGGT +
Preference number: 4 (lower is better)
Translates to: PREGCSPQDAELLTTAPSCSGNR*ARGGEG
Trigger: ACCCTCTCCGCCGCGTGCCCAACGGTTACCACTGCA...GCTTGGAGCCGTTGTGAGGAGCTCTGCGTCCTGTGGGGAGCACCCTTCACGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGGAGTCAGGGGCGTCTaGGGGAGCTGCCTCCGCCCA +
Preference number: 4 (lower is better)
Translates to: EGRLPRVDDKTHPLEHTPGVRGV*GSCLRP
Trigger: TGGGCGGAGGCAGCTCCCCCAGACGCCCCTGACTCC...AGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GCCCGGCCTCAGTGGCAGGAGCCGTGTCCTCCCTCGGTCACTTGCTCTGAGTTTAGAAGGCAGGGAGGCTaGTCTGAGCCCCGGCGAAGT +
Preference number: 4 (lower is better)
Translates to: ARPQWQEPCPPSVTCSEFRRQGG*SEPRRS
Trigger: ACTTCGCCGGGGCTCAGACCAGCCTCCCTGCCTTCT...AAACTCAGAGCAAGTGACCGAGGGAGGACACGGCTCCTGCCACTGAGGCCGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp TGGCGCCAGGACAGTGCTGGGCATCAGGTGCCCGGCCTCAGTGGCAGGAGCCGTACACCCAAGATAACATaGGCTGGGGGCTGGGGAACA +
Preference number: 4 (lower is better)
Translates to: WRQDSAGHQVPGLSGRSRTPKIT*AGGWGT
Trigger: TGTTCCCCAGCCCCCAGCCCATGTTATCTTGGGTGT...ACGGCTCCTGCCACTGAGGCCGGGCACCTGATGCCCAGCACTGTCCTGGCGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR CAA 72 bp TCTCTCCTGAGCGTGGCCATGGGGGTCAGACCTCACTaGACTGCCTGCTCCCTGTGTCTGGCGCCAGGACAG +
Preference number: 4 (lower is better)
Translates to: SLLSVAMGVRPH*TACSLCLAPGQ
Trigger: CTGTCCTGGCGCCAGACACAGGGAGCAGGCAGTCAAGTGAGGTCTGACCCCCATGGCCACGCTCAGGAGAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp CGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTCTTGGTCAGGGTGGTGGTAGGAGCTTCCCGGCTTaGTGGCCGCCCAGACCACTT +
Preference number: 4 (lower is better)
Translates to: RLSGHGAASTSGLGQGGGRSFPA*WPPRPL
Trigger: AAGTGGTCTGGGCGGCCATCAAGCCGGGAAGCTCCT...ACCACCACCCTGACCAAGACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR TCA 90 bp AGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGTCGAGTGACGTTCCGCTaGTTGTCTGCATCCTCTGGC +
Preference number: 4 (lower is better)
Translates to: RSRRTFRWALLLCAARPRRVTFR*LSASSG
Trigger: GCCAGAGGATGCAGACAATCAGCGGAACGTCACTCG...ACGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGCCACCCGAGCTGAGTCCCAGGGTGCACCCCAAAGGCGATaGTCTTCAGCACGCATTCCA +
Preference number: 4 (lower is better)
Translates to: VRVVVAVPCSATRAESQGAPQRR*SSARIP
Trigger: TGGAATGCGTGCTGAAGATCATCGCCTTTGGGGTGC...ACCCTGGGACTCAGCTCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR TCA 90 bp CACAGGAGCCTCACCAAGGTGGGCAAGGCCTCCCCCGAGGGCCGGCTGCCCCGTCATTCCAGGCATCTCTaGAATAGTTCAGCACCCCAA +
Preference number: 4 (lower is better)
Translates to: HRSLTKVGKASPEGRLPRHSRHL*NSSAPQ
Trigger: TTGGGGTGCTGAACTATTTCAGAGATGCCTGGAATG...ACGGGGCAGCCGGCCCTCGGGGGAGGCCTTGCCCACCTTGGTGAGGCTCCTGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp TCGGCCACCCGAGCTGAGTCCCAGGGTGCAGTGGTAACCGTTGGGCACGCGGCGAGAACAGCATGGCAATaGGCAGACACACGTAGGGCA +
Preference number: 4 (lower is better)
Translates to: SATRAESQGAVVTVGHAARTAWQ*ADTRRA
Trigger: TGCCCTACGTGTGTCTGCTCATTGCCATGCTGTTCT...CGCCGCGTGCCCAACGGTTACCACTGCACCCTGGGACTCAGCTCGGGTGGCCGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR TCA 90 bp GCTTGCCTGAGTGAGCATTCGCTGACACTGGCGGGCTGCACAAGCCACGACTGTCCCCCGTGGCGCTCCTaGACAGCAGCATCAGGGCTT +
Preference number: 4 (lower is better)
Translates to: ACLSEHSLTLAGCTSHDCPPWRS*TAASGL
Trigger: AAGCCCTGATGCTGCTGTTCAGGAGCGCCACGGGGG...ACAGTCGTGGCTTGTGCAGCCCGCCAGTGTCAGCGAATGCTCACTCAGGCAAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp CCCCTCCGTCCCGAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCACATGTCATTGTAACTaGTGCGCCCACACGCAGCCG +
Preference number: 4 (lower is better)
Translates to: PLRPEVSAHFQVGPASLCTCHCN*CAHTQP
Trigger: CGGCTGCGTGTGGGCGCATCAGTTACAATGACATGT...GCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTCGGGACGGAGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGCCAGTGCCGTCCGGATaGGGGCCATCAGCGTGGACG +
Preference number: 4 (lower is better)
Translates to: AGCPVWMIKLIHWNTRLLPVPSG*GPSAWT
Trigger: CGTCCACGCTGATGGCCCTCATCCGGACGGCACTGG...CAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp CCCGAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCACAGCCAGTGCTCCTaGCCGCCCCACAGGGATCTC +
Preference number: 4 (lower is better)
Translates to: PEGRLPRVDDKTHPLEHTHSQCS*PPHRDL
Trigger: GAGATCCCTGTGGGGCGGTCAGGAGCACTGGCTGTG...CGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp CGGTTTAGGGTCTGGTGTGTGGTACGAGACCCAGGAAGGCAGGACAGGAAGGGGCACAGCCAGTGCTCCTaGCCGCCCCACAGGGATCTC +
Preference number: 4 (lower is better)
Translates to: RFRVWCVVRDPGRQDRKGHSQCS*PPHRDL
Trigger: GAGATCCCTGTGGGGCGGTCAGGAGCACTGGCTGTG...CCCCTTCCTGTCCTGCCTTCCTGGGTCTCGTACCACACACCAGACCCTAAACCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGTGGGGCTGGCATCTGTaGCGGGCTGAGTCTCGGCCG +
Preference number: 4 (lower is better)
Translates to: AGCPVWMIKLIHWNTRLLWGWHL*RAESRP
Trigger: CGGCCGAGACTCAGCCCGTCACAGATGCCAGCCCCA...CAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp CCCGAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGACGTTGGGTGGCTGCTaGGGGAGGGCTTGGGCTTCG +
Preference number: 4 (lower is better)
Translates to: PEGRLPRVDDKTHPLEHTTLGGC*GRAWAS
Trigger: CGAAGCCCAAGCCCTCCCTCAGCAGCCACCCAACGT...CGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp CCTGCTGCATGCAGGCGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTCTTCTGCATGCAGGCGTCTaGGCGGTCACGGTGCAGCTA +
Preference number: 4 (lower is better)
Translates to: PAACRRLSGHGAASTSGLLHAGV*AVTVQL
Trigger: TAGCTGCACCGTGACCGCTCAGACGCCTGCATGCAG...AAGACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACGCCTGCATGCAGCAGG
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR TCA 90 bp CCCCTCCGTCCCGAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCGCTAGCACCAGATGTTaGCAGCAAGGGGCTCCCATT +
Preference number: 4 (lower is better)
Translates to: PLRPEVSAHFQVGPASLCASTRC*QQGAPI
Trigger: AATGGGAGCCCCTTGCTGTCAACATCTGGTGCTAGC...GCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTCGGGACGGAGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCCCTTCCACTCGTGGGAGGAGGTGGCCGTCTTGTAGGTaGTGCTGGGGCGGGGAGTCA +
Preference number: 4 (lower is better)
Translates to: VVSCPVASLETPSTRGRRWPSCR*CWGGES
Trigger: TGACTCCCCGCCCCAGCATCACCTACAAGACGGCCA...CCTCCTCCCACGAGTGGAAGGGGTTTCCAAGGAAGCCACAGGGCAGCTGACCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GCTTGCCTGAGTGAGCATTCGCTGACACTGGCGGGCTGCACAAGCCACGACTGTCGGTTCCTGTGGGGCTaGCGGTGTCCAGGGAGGACA +
Preference number: 4 (lower is better)
Translates to: ACLSEHSLTLAGCTSHDCRFLWG*RCPGRT
Trigger: TGTCCTCCCTGGACACCGTCAGCCCCACAGGAACCG...ACAGTCGTGGCTTGTGCAGCCCGCCAGTGTCAGCGAATGCTCACTCAGGCAAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp CCCGAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCACAGCATCCTGCGGTaGTGGATCCCGAGGCCTCGC +
Preference number: 4 (lower is better)
Translates to: PEGRLPRVDDKTHPLEHTHSILR*WIPRPR
Trigger: GCGAGGCCTCGGGATCCATCACCGCAGGATGCTGTG...CGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp CCCCTCCGTCCCGAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCGCAACAGGAGCACAGTaGTCACATGCACAGTCCGAG +
Preference number: 4 (lower is better)
Translates to: PLRPEVSAHFQVGPASLCATGAQ*SHAQSE
Trigger: CTCGGACTGTGCATGTGATCACTGTGCTCCTGTTGC...GCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTCGGGACGGAGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGGCCAGTTCCAGGTGTTaGCGGCCGCATCGTTTGTAT +
Preference number: 4 (lower is better)
Translates to: EVSAHFQVGPASLCRTATASSRC*RPHRLY
Trigger: ATACAAACGATGCGGCCGGCAACACCTGGAACTGGC...CGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCCCTTCCACTCGTGGGAGGAGGCGCTCGATCTGCTGCTaGCGGCGCAGCTTCAGGAAG +
Preference number: 4 (lower is better)
Translates to: VVSCPVASLETPSTRGRRRSICC*RRSFRK
Trigger: CTTCCTGAAGCTGCGCCGGCAGCAGCAGATCGAGCG...CCTCCTCCCACGAGTGGAAGGGGTTTCCAAGGAAGCCACAGGGCAGCTGACCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GTCTTGGTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGCCACCCGAGCTGAGTCCAGGGGACTTCTCCTCTaGATTCCTGTCCTCCTCGGC +
Preference number: 4 (lower is better)
Translates to: VLVRVVVAVPCSATRAESRGLLL*IPVLLG
Trigger: GCCGAGGAGGACAGGAATGCAGAGGAGAAGTCCCCT...GGACTCAGCTCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGACCAAGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR GCA 90 bp GCTGAGTCCCAGGGTGCAGTGGTAACCGTTGGGCACGCGGCGGAGAGGGTGAGAAGGGGACTTCTCCTCTaGATTCCTGTCCTCCTCGGC +
Preference number: 4 (lower is better)
Translates to: AESQGAVVTVGHAAERVRRGLLL*IPVLLG
Trigger: GCCGAGGAGGACAGGAATGCAGAGGAGAAGTCCCCT...TCTCACCCTCTCCGCCGCGTGCCCAACGGTTACCACTGCACCCTGGGACTCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR GCA 90 bp TGGCGCCAGGACAGTGCTGGGCATCAGGTGCCCGGCCTCAGTGGCAGGAGCCGTGGATCAGGTCATTTCTaGTCTTCTTGGTGGCCGCTC +
Preference number: 4 (lower is better)
Translates to: WRQDSAGHQVPGLSGRSRGSGHF*SSWWPL
Trigger: GAGCGGCCACCAAGAAGAGCAGAAATGACCTGATCC...ACGGCTCCTGCCACTGAGGCCGGGCACCTGATGCCCAGCACTGTCCTGGCGCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGCTGGCCCGCAGGTTCTaGAGCCGTAGCTGGCTGGCC +
Preference number: 4 (lower is better)
Translates to: AGCPVWMIKLIHWNTRLLLARRF*SRSWLA
Trigger: GGCCAGCCAGCTACGGCTGCAGAACCTGCGGGCCAG...CAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GAAAATGCCTCACACAAGCACGTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCCCTCAGGTCGGGCTTTaGCTCCCACGGGCCCCCGCG +
Preference number: 4 (lower is better)
Translates to: ENASHKHVVSCPVASLETPQVGL*LPRAPA
Trigger: CGCGGGGGCCCGTGGGAGGCAAAGCCCGACCTGAGG...GGTTTCCAAGGAAGCCACAGGGCAGCTGACCACGTGCTTGTGTGAGGCATTTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GCTTGCCTGAGTGAGCATTCGCTGACACTGGCGGGCTGCACAAGCCACGACTGTTTGTCCTTGTCGCGGTaGCGGTGGTGCCTGCGCGGA +
Preference number: 4 (lower is better)
Translates to: ACLSEHSLTLAGCTSHDCLSLSR*RWCLRG
Trigger: TCCGCGCAGGCACCACCGGCACCGCGACAAGGACAA...ACAGTCGTGGCTTGTGCAGCCCGCCAGTGTCAGCGAATGCTCACTCAGGCAAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp CCCGAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGTTGTCCTTGTCGCGGTaGCGGTGGTGCCTGCGCGGA +
Preference number: 4 (lower is better)
Translates to: PEGRLPRVDDKTHPLEHTLSLSR*RWCLRG
Trigger: TCCGCGCAGGCACCACCGGCACCGCGACAAGGACAA...CGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp CTCGTGGGAGGAGGACAGCAAATGGCTGCCTTGTTTGCCACCATGACATCCAGTCGCCTTCGGGGCCTCTaGTCGGTCCTGGTCCCCCGC +
Preference number: 4 (lower is better)
Translates to: LVGGGQQMAALFATMTSSRLRGL*SVLVPR
Trigger: GCGGGGGACCAGGACCGAGCAGAGGCCCCGAAGGCG...ACTGGATGTCATGGTGGCAAACAAGGCAGCCATTTGCTGTCCTCCTCCCACGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGTTGCTCGGATCCTGGTaGCGGTGCGCGCGGTGGCGT +
Preference number: 4 (lower is better)
Translates to: AGCPVWMIKLIHWNTRLLLLGSW*RCARWR
Trigger: ACGCCACCGCGCGCACCGGCACCAGGATCCGAGCAA...CAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp TTGGTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGCCACCCGAGCTGAGTCCCAGAGATGGACAGCTCCATaGGGTACCCAGGGCTTGGAC +
Preference number: 4 (lower is better)
Translates to: LVRVVVAVPCSATRAESQRWTAP*GTQGLD
Trigger: GTCCAAGCCCTGGGTACCGCATGGAGCTGTCCATCT...CTGGGACTCAGCTCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGACCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR GCA 90 bp GCACCAGTGGTCTTGGTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGCCACCCGATCGGTGGCATTGGCCTaGTCATCACAGGCCTGGTTG +
Preference number: 4 (lower is better)
Translates to: APVVLVRVVVAVPCSATRSVALA*SSQAWL
Trigger: CAACCAGGCCTGTGATGAGCAGGCCAATGCCACCGA...TCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGACCAAGACCACTGGTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR GCA 90 bp GCCCGGCCTCAGTGGCAGGAGCCGTGTCCTCCCTCGGTCACTTGCTCTGAGTTTAGGCCTCCAGGAGCCTaGTGCATCTGGTCTCTGGTG +
Preference number: 4 (lower is better)
Translates to: ARPQWQEPCPPSVTCSEFRPPGA*CIWSLV
Trigger: CACCAGAGACCAGATGCAGCAGGCTCCTGGAGGCCT...AAACTCAGAGCAAGTGACCGAGGGAGGACACGGCTCCTGCCACTGAGGCCGGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp CCACGTGAAGGGTGCTCCCCACAGGACGCAGAGCTCCTCACAACGGCTCCAAGCACAGCCGGCTGTGTCTaGTCCAGGGTGGCCTTCAGA +
Preference number: 4 (lower is better)
Translates to: PREGCSPQDAELLTTAPSTAGCV*SRVAFR
Trigger: TCTGAAGGCCACCCTGGAGCAGACACAGCCGGCTGT...GCTTGGAGCCGTTGTGAGGAGCTCTGCGTCCTGTGGGGAGCACCCTTCACGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCCCTTCCACTCGTGGGAGGAGGGGTCCGGGGTGGTGCTaGAAAGATGAGTCCCACGGG +
Preference number: 4 (lower is better)
Translates to: VVSCPVASLETPSTRGRRGPGWC*KDESHG
Trigger: CCCGTGGGACTCATCTTTGCAGCACCACCCCGGACC...CCTCCTCCCACGAGTGGAAGGGGTTTCCAAGGAAGCCACAGGGCAGCTGACCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp CGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTCTTGGTCAGGGTGGTGGTGGCGGTCCGGGGTGGTaGTGCAAAGATGAGTCCCAC +
Preference number: 4 (lower is better)
Translates to: RLSGHGAASTSGLGQGGGGGPGW*CKDESH
Trigger: GTGGGACTCATCTTTGCAGCACCACCCCGGACCGCC...ACCACCACCCTGACCAAGACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR GCA 90 bp GTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCCCTTCCACTCGTGGGAGGAGGGGCGGTCCGGGGTGGTaGTGCAAAGATGAGTCCCAC +
Preference number: 4 (lower is better)
Translates to: VVSCPVASLETPSTRGRRGGPGW*CKDESH
Trigger: GTGGGACTCATCTTTGCAGCACCACCCCGGACCGCC...CCTCCTCCCACGAGTGGAAGGGGTTTCCAAGGAAGCCACAGGGCAGCTGACCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp TCCAGGGAGGACAGAGCTTGCCTGAGTGAGCATTCGCTGACACTGGCGGGCTGCGGCGGTCCGGGGTGGTaGTGCAAAGATGAGTCCCAC +
Preference number: 4 (lower is better)
Translates to: SREDRACLSEHSLTLAGCGGPGW*CKDESH
Trigger: GTGGGACTCATCTTTGCAGCACCACCCCGGACCGCC...GCAGCCCGCCAGTGTCAGCGAATGCTCACTCAGGCAAGCTCTGTCCTCCCTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp CGGTTTAGGGTCTGGTGTGTGGTACGAGACCCAGGAAGGCAGGACAGGAAGGGGTCTGCTTCCTGTCCCTaGGGCGGTGGCAGCGGTGGT +
Preference number: 4 (lower is better)
Translates to: RFRVWCVVRDPGRQDRKGSASCP*GGGSGG
Trigger: ACCACCGCTGCCACCGCCGCAGGGACAGGAAGCAGA...CCCCTTCCTGTCCTGCCTTCCTGGGTCTCGTACCACACACCAGACCCTAAACCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp CCCCTCCGTCCCGAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCACAGCACTGCTTGGTaGGCCATCCATATCGGCAGA +
Preference number: 4 (lower is better)
Translates to: PLRPEVSAHFQVGPASLCHSTAW*AIHIGR
Trigger: TCTGCCGATATGGATGGCGCACCAAGCAGTGCTGTG...GCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTCGGGACGGAGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp CCCGAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGGTGGTAGCTGTGCCGTaGTCGGCCACCCGAGCTGAG +
Preference number: 4 (lower is better)
Translates to: PEGRLPRVDDKTHPLEHTVVAVP*SATRAE
Trigger: CTCAGCTCGGGTGGCCGAGCACGGCACAGCTACCAC...CGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp TCCAGGGAGGACAGAGCTTGCCTGAGTGAGCATTCGCTGACACTGGCGGGCTGCCTTTCAGGTGGGCCCTaGTTCTCTGTGCCGCACGGC +
Preference number: 4 (lower is better)
Translates to: SREDRACLSEHSLTLAGCLSGGP*FSVPHG
Trigger: GCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAG...GCAGCCCGCCAGTGTCAGCGAATGCTCACTCAGGCAAGCTCTGTCCTCCCTGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp TCCAGGGAGGACAGAGCTTGCCTGAGTGAGCATTCGCTGACACTGGCGGGCTGCCCACTGGCAAGGGCTTaGTACCTGGCTGCCATCGCG +
Preference number: 4 (lower is better)
Translates to: SREDRACLSEHSLTLAGCPLARA*YLAAIA
Trigger: CGCGATGGCAGCCAGGTAGCAAGCCCTTGCCAGTGG...GCAGCCCGCCAGTGTCAGCGAATGCTCACTCAGGCAAGCTCTGTCCTCCCTGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp CCCCTCCGTCCCGAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCAAGCACGTGGTCAGCTaGCCTGTGGCTTCCTTGGAA +
Preference number: 4 (lower is better)
Translates to: PLRPEVSAHFQVGPASLCKHVVS*PVASLE
Trigger: TTCCAAGGAAGCCACAGGGCAGCTGACCACGTGCTT...GCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTCGGGACGGAGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGGGCTTCCTCCCTCCTaGCCTGACGGCCCCACATCC +
Preference number: 4 (lower is better)
Translates to: EGRLPRVDDKTHPLEHTPGLPPS*PDGPTS
Trigger: GGATGTGGGGCCGTCAGGGCAGGAGGGAGGAAGCCC...AGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTCTGGCGCCAGGACAGTaGTGGGCATCAGGTGCCCGG +
Preference number: 4 (lower is better)
Translates to: EGRLPRVDDKTHPLEHTPLAPGQ*WASGAR
Trigger: CCGGGCACCTGATGCCCAGCACTGTCCTGGCGCCAG...AGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp AGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGTCAGACCTCACTTGACTaGCTGCTCCCTGTGTCTGGC +
Preference number: 4 (lower is better)
Translates to: RSRRTFRWALLLCAARPRQTSLD*LLPVSG
Trigger: GCCAGACACAGGGAGCAGGCAGTCAAGTGAGGTCTG...ACGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp CCCCTCCGTCCCGAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCCTCCCAGCATCTTGTaGACCTTGGACAGTGTCCTG +
Preference number: 4 (lower is better)
Translates to: PLRPEVSAHFQVGPASLCPPSIL*TLDSVL
Trigger: CAGGACACTGTCCAAGGTGCACAAGATGCTGGGAGG...GCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTCGGGACGGAGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CCCCTCCGTCCCGAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCCGCATCTGTGCTGTTaGGGAAACAGGCCTTGTGGA +
Preference number: 4 (lower is better)
Translates to: PLRPEVSAHFQVGPASLCPHLCC*GNRPCG
Trigger: TCCACAAGGCCTGTTTCCCCAACAGCACAGATGCGG...GCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTCGGGACGGAGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CACAGGAGCCTCACCAAGGTGGGCAAGGCCTCCCCCGAGGGCCGGCTGCCCCGTTGTCGAAGTTGGTTGTaGGAGTCTCATCCTGGAAGT +
Preference number: 4 (lower is better)
Translates to: HRSLTKVGKASPEGRLPRCRSWL*ESHPGS
Trigger: ACTTCCAGGATGAGACTCCCACAACCAACTTCGACA...ACGGGGCAGCCGGCCCTCGGGGGAGGCCTTGCCCACCTTGGTGAGGCTCCTGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGCCACCCGAGCTGAGTCCCAGGGTTCTCCCGTCAGGATCTaGAAGACAGTGAGGATGGCG +
Preference number: 4 (lower is better)
Translates to: VRVVVAVPCSATRAESQGSPVRI*KTVRMA
Trigger: CGCCATCCTCACTGTCTTCCAGATCCTGACGGGAGA...ACCCTGGGACTCAGCTCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp CACAGGAGCCTCACCAAGGTGGGCAAGGCCTCCCCCGAGGGCCGGCTGCCCCGTCTTCAGCCACTTCTTTaGCCTTTTGCAGAGCAAGCT +
Preference number: 4 (lower is better)
Translates to: HRSLTKVGKASPEGRLPRLQPLL*PFAEQA
Trigger: AGCTTGCTCTGCAAAAGGCCAAAGAAGTGGCTGAAG...ACGGGGCAGCCGGCCCTCGGGGGAGGCCTTGCCCACCTTGGTGAGGCTCCTGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp TCCAGGGAGGACAGAGCTTGCCTGAGTGAGCATTCGCTGACACTGGCGGGCTGCGCTGCCTGGCGGCGATaGAGATGTTCGCGGCAGACA +
Preference number: 4 (lower is better)
Translates to: SREDRACLSEHSLTLAGCAAWRR*RCSRQT
Trigger: TGTCTGCCGCGAACATCTCCATCGCCGCCAGGCAGC...GCAGCCCGCCAGTGTCAGCGAATGCTCACTCAGGCAAGCTCTGTCCTCCCTGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CCACGTGAAGGGTGCTCCCCACAGGACGCAGAGCTCCTCACAACGGCTCCAAGCCCGAGTTCTGCTGCCTaGCGGCGATGGAGATGTTCG +
Preference number: 4 (lower is better)
Translates to: PREGCSPQDAELLTTAPSPSSAA*RRWRCS
Trigger: CGAACATCTCCATCGCCGCCAGGCAGCAGAACTCGG...GCTTGGAGCCGTTGTGAGGAGCTCTGCGTCCTGTGGGGAGCACCCTTCACGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CGGTTTAGGGTCTGGTGTGTGGTACGAGACCCAGGAAGGCAGGACAGGAAGGGGTTCTGCAGCCGTAGCTaGCTGGCCCGCTGCTCCCAC +
Preference number: 4 (lower is better)
Translates to: RFRVWCVVRDPGRQDRKGFCSRS*LARCSH
Trigger: GTGGGAGCAGCGGGCCAGCCAGCTACGGCTGCAGAA...CCCCTTCCTGTCCTGCCTTCCTGGGTCTCGTACCACACACCAGACCCTAAACCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTATGTCGGGCCGCAGGTaGCGCGTAGTGGCGAAGCGC +
Preference number: 4 (lower is better)
Translates to: EGRLPRVDDKTHPLEHTPMSGRR*RVVAKR
Trigger: GCGCTTCGCCACTACGCGCCACCTGCGGCCCGACAT...AGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GCTGCATGCAGGCGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTCTTGGTCTCCAGGTCACAGTGTaGCTCCCGGGGCTGGTGGTT +
Preference number: 4 (lower is better)
Translates to: AACRRLSGHGAASTSGLGLQVTV*LPGLVV
Trigger: AACCACCAGCCCCGGGAGCCACACTGTGACCTGGAG...ACCAAGACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACGCCTGCATGCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp GTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGCCACCCGAGCTGAGTCCCAGGGTCAGTCACAGTCCCACTaGTCTCCAGGTCACAGTGTG +
Preference number: 4 (lower is better)
Translates to: VRVVVAVPCSATRAESQGQSQSH*SPGHSV
Trigger: CACACTGTGACCTGGAGACCAGTGGGACTGTGACTG...ACCCTGGGACTCAGCTCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp GAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGCAGTCACAGTCCCACTaGTCTCCAGGTCACAGTGTG +
Preference number: 4 (lower is better)
Translates to: EVSAHFQVGPASLCRTATQSQSH*SPGHSV
Trigger: CACACTGTGACCTGGAGACCAGTGGGACTGTGACTG...CGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp ACCCGAGCTGAGTCCCAGGGTGCAGTGGTAACCGTTGGGCACGCGGCGGAGAGGGGCGGAGCAGGTTGGTaGGGCTTAAACAGAACATGG +
Preference number: 4 (lower is better)
Translates to: TRAESQGAVVTVGHAAERGGAGW*GLNRTW
Trigger: CCATGTTCTGTTTAAGCCCCACCAACCTGCTCCGCC...CCTCTCCGCCGCGTGCCCAACGGTTACCACTGCACCCTGGGACTCAGCTCGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp GAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGGGCGGAGCAGGTTGGTaGGGCTTAAACAGAACATGG +
Preference number: 4 (lower is better)
Translates to: EVSAHFQVGPASLCRTATGGAGW*GLNRTW
Trigger: CCATGTTCTGTTTAAGCCCCACCAACCTGCTCCGCC...CGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GCTTGCCTGAGTGAGCATTCGCTGACACTGGCGGGCTGCACAAGCCACGACTGTCGAGTCTGTGCGCACTaGGTCCTCAGCAGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: ACLSEHSLTLAGCTSHDCRVCAH*VLSSQG
Trigger: GCCCTGGCTGCTGAGGACCCAGTGCGCACAGACTCG...ACAGTCGTGGCTTGTGCAGCCCGCCAGTGTCAGCGAATGCTCACTCAGGCAAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GCTGTGCCGTGCTCGGCCACCCGAGCTGAGTCCCAGGGTGCAGTGGTAACCGTTTCAGAGCGTTGTTCCTaGGCGAGTCTGTGCGCACTG +
Preference number: 4 (lower is better)
Translates to: AVPCSATRAESQGAVVTVSERCS*ASLCAL
Trigger: CAGTGCGCACAGACTCGCCCAGGAACAACGCTCTGA...AACGGTTACCACTGCACCCTGGGACTCAGCTCGGGTGGCCGAGCACGGCACAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp GTCTTGGTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGCCACCCGAGCTGAGTCCAGTGTTTCAGCACCATaGGCCAGCCTTCTCCCGTGG +
Preference number: 4 (lower is better)
Translates to: VLVRVVVAVPCSATRAESSVSAP*ASLLPW
Trigger: CCACGGGAGAAGGCTGGCCCATGGTGCTGAAACACT...GGACTCAGCTCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGACCAAGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp GAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGAACGACTGCCGGTTTTaGGGCATGTACCGTGTCAGG +
Preference number: 4 (lower is better)
Translates to: EVSAHFQVGPASLCRTATNDCRF*GMYRVR
Trigger: CCTGACACGGTACATGCCCCAAAACCGGCAGTCGTT...CGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp TGGCGCCAGGACAGTGCTGGGCATCAGGTGCCCGGCCTCAGTGGCAGGAGCCGTGTCCGGAAGTTGTTGTaGCGGTTGATGCTGGTGTCA +
Preference number: 4 (lower is better)
Translates to: WRQDSAGHQVPGLSGRSRVRKLL*RLMLVS
Trigger: TGACACCAGCATCAACCGCCACAACAACTTCCGGAC...ACGGCTCCTGCCACTGAGGCCGGGCACCTGATGCCCAGCACTGTCCTGGCGCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GTCTTGGTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGCCACCCGAGCTGAGTCCTGCTCATCACAGGCCTaGTTGCTCAGGCAGGACAGC +
Preference number: 4 (lower is better)
Translates to: VLVRVVVAVPCSATRAESCSSQA*LLRQDS
Trigger: GCTGTCCTGCCTGAGCAACCAGGCCTGTGATGAGCA...GGACTCAGCTCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGACCAAGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp GCACCAGTGGTCTTGGTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGCCACCCGACACACTCGGTGGCATTaGCCTGCTCATCACAGGCCT +
Preference number: 4 (lower is better)
Translates to: APVVLVRVVVAVPCSATRHTRWH*PAHHRP
Trigger: AGGCCTGTGATGAGCAGGCCAATGCCACCGAGTGTG...TCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGACCAAGACCACTGGTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp TTGGTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGCCACCCGAGCTGAGTCCCAGCACACTCGGTGGCATTaGCCTGCTCATCACAGGCCT +
Preference number: 4 (lower is better)
Translates to: LVRVVVAVPCSATRAESQHTRWH*PAHHRP
Trigger: AGGCCTGTGATGAGCAGGCCAATGCCACCGAGTGTG...CTGGGACTCAGCTCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGACCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp AGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGTCACACTCGGTGGCATTaGCCTGCTCATCACAGGCCT +
Preference number: 4 (lower is better)
Translates to: RSRRTFRWALLLCAARPRHTRWH*PAHHRP
Trigger: AGGCCTGTGATGAGCAGGCCAATGCCACCGAGTGTG...ACGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp TTGGTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGCCACCCGAGCTGAGTCCCAGCTGCTTTGTCCCAGCTaGGGCCAGCTTGATCTCCAG +
Preference number: 4 (lower is better)
Translates to: LVRVVVAVPCSATRAESQLLCPS*GQLDLQ
Trigger: CTGGAGATCAAGCTGGCCCCAGCTGGGACAAAGCAG...CTGGGACTCAGCTCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGACCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp GCTTGCCTGAGTGAGCATTCGCTGACACTGGCGGGCTGCACAAGCCACGACTGTGCTCCAGGGGTGGCCTaGCCTCATGGGGTGCATCCT +
Preference number: 4 (lower is better)
Translates to: ACLSEHSLTLAGCTSHDCAPGVA*PHGVHP
Trigger: AGGATGCACCCCATGAGGCCAGGCCACCCCTGGAGC...ACAGTCGTGGCTTGTGCAGCCCGCCAGTGTCAGCGAATGCTCACTCAGGCAAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CCCGAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCAGCGGTGGTGGTGGTaGTGCGACGACGCCTGGCTA +
Preference number: 4 (lower is better)
Translates to: PEGRLPRVDDKTHPLEHTQRWWW*CDDAWL
Trigger: TAGCCAGGCGTCGTCGCACCACCACCACCACCGCTG...CGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGTGGCAGCGGTGGTGGTaGTGGTGCGACGACGCCTGG +
Preference number: 4 (lower is better)
Translates to: AGCPVWMIKLIHWNTRLLWQRWW*WCDDAW
Trigger: CCAGGCGTCGTCGCACCACCACCACCACCGCTGCCA...CAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTTGGCAGCGGTGGTGGTaGTGGTGCGACGACGCCTGG +
Preference number: 4 (lower is better)
Translates to: EGRLPRVDDKTHPLEHTPWQRWW*WCDDAW
Trigger: CCAGGCGTCGTCGCACCACCACCACCACCGCTGCCA...AGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTCTTGGTCAGGGTGGTGGTCTCCTGGCCAGCTGTTaGCGACGTTGGGTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: RLSGHGAASTSGLGQGGGLLASC*RRWVAA
Trigger: AGCAGCCACCCAACGTCGCCAACAGCTGGCCAGGAG...ACCACCACCCTGACCAAGACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp CCTGCTGCATGCAGGCGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTCTTAGCGGCCCGAGTTGGTaGCCACAGCCTCCTCGAAAG +
Preference number: 4 (lower is better)
Translates to: PAACRRLSGHGAASTSGLSGPSW*PQPPRK
Trigger: CTTTCGAGGAGGCTGTGGCCACCAACTCGGGCCGCT...AAGACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACGCCTGCATGCAGCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp CCCGAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGAGGAGCGGCCCGAGTTaGTGGCCACAGCCTCCTCGA +
Preference number: 4 (lower is better)
Translates to: PEGRLPRVDDKTHPLEHTRSGPS*WPQPPR
Trigger: TCGAGGAGGCTGTGGCCACCAACTCGGGCCGCTCCT...CGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGGAGCCTCACCAAGGTaGGCAAGGCCTCCCCCGAGG +
Preference number: 4 (lower is better)
Translates to: EGRLPRVDDKTHPLEHTPGASPR*ARPPPR
Trigger: CCTCGGGGGAGGCCTTGCCCACCTTGGTGAGGCTCC...AGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGGGAGCCTCACCAAGGTaGGCAAGGCCTCCCCCGAGG +
Preference number: 4 (lower is better)
Translates to: AGCPVWMIKLIHWNTRLLGASPR*ARPPPR
Trigger: CCTCGGGGGAGGCCTTGCCCACCTTGGTGAGGCTCC...CAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGGAACCACTGCCCTGTaGGTGGGGTCCCGGCTCCTG +
Preference number: 4 (lower is better)
Translates to: EGRLPRVDDKTHPLEHTPGTTAL*VGSRLL
Trigger: CAGGAGCCGGGACCCCACCCACAGGGCAGTGGTTCC...AGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCCCTTCCACTCGTGGGAGGAGGCCCCGGCGAAGTGGATaGGTGAGGAGTTGGCCGTCT +
Preference number: 4 (lower is better)
Translates to: VVSCPVASLETPSTRGRRPRRSG*VRSWPS
Trigger: AGACGGCCAACTCCTCACCCATCCACTTCGCCGGGG...CCTCCTCCCACGAGTGGAAGGGGTTTCCAAGGAAGCCACAGGGCAGCTGACCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CCCCTCCGTCCCGAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCTTAGGGTCTGGTGTGTaGTACGAGACCCAGGAAGGC +
Preference number: 4 (lower is better)
Translates to: PLRPEVSAHFQVGPASLCLGSGV*YETQEG
Trigger: GCCTTCCTGGGTCTCGTACCACACACCAGACCCTAA...GCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTCGGGACGGAGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp TCCAGGGAGGACAGAGCTTGCCTGAGTGAGCATTCGCTGACACTGGCGGGCTGCCGGCGCACTTTCAGGTaGGCCCTGCTTCTCTGTGCC +
Preference number: 4 (lower is better)
Translates to: SREDRACLSEHSLTLAGCRRTFR*ALLLCA
Trigger: GGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCG...GCAGCCCGCCAGTGTCAGCGAATGCTCACTCAGGCAAGCTCTGTCCTCCCTGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCCCTTCCACTCGTGGGAGGAGGCCGTCTACGTCCACCTaGACCGGACAGGGCTGCACA +
Preference number: 4 (lower is better)
Translates to: VVSCPVASLETPSTRGRRPSTST*TGQGCT
Trigger: TGTGCAGCCCTGTCCGGTCCAGGTGGACGTAGACGG...CCTCCTCCCACGAGTGGAAGGGGTTTCCAAGGAAGCCACAGGGCAGCTGACCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp AGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGTTGGCGGTCAGGCACTTaGTCAAGAGCAGCAGAGCCA +
Preference number: 4 (lower is better)
Translates to: RSRRTFRWALLLCAARPRWRSGT*SRAAEP
Trigger: TGGCTCTGCTGCTCTTGACCAAGTGCCTGACCGCCA...ACGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp TCCAGGGAGGACAGAGCTTGCCTGAGTGAGCATTCGCTGACACTGGCGGGCTGCCTGGGTGTGAGGGCCTaGCGGTCAGGCACTTGGTCA +
Preference number: 4 (lower is better)
Translates to: SREDRACLSEHSLTLAGCLGVRA*RSGTWS
Trigger: TGACCAAGTGCCTGACCGCCAGGCCCTCACACCCAG...GCAGCCCGCCAGTGTCAGCGAATGCTCACTCAGGCAAGCTCTGTCCTCCCTGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp AGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGTTCCAGTGCTCTCCACTaGCAAGGGCTTGCTACCTGG +
Preference number: 4 (lower is better)
Translates to: RSRRTFRWALLLCAARPRSSALH*QGLATW
Trigger: CCAGGTAGCAAGCCCTTGCCAGTGGAGAGCACTGGA...ACGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp AGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGTCCTCACACAAGCACGTaGTCAGCTGCCCTGTGGCTT +
Preference number: 4 (lower is better)
Translates to: RSRRTFRWALLLCAARPRPHTST*SAALWL
Trigger: AAGCCACAGGGCAGCTGACCACGTGCTTGTGTGAGG...ACGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CGGTTTAGGGTCTGGTGTGTGGTACGAGACCCAGGAAGGCAGGACAGGAAGGGGCCTGCTCCCTGTGTCTaGCGCCAGGACAGTGCTGGG +
Preference number: 4 (lower is better)
Translates to: RFRVWCVVRDPGRQDRKGPAPCV*RQDSAG
Trigger: CCCAGCACTGTCCTGGCGCCAGACACAGGGAGCAGG...CCCCTTCCTGTCCTGCCTTCCTGGGTCTCGTACCACACACCAGACCCTAAACCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp ACGCCTGCTGCATGCAGGCGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTACTCCAGGTACCCGTTaGGCTCTCGCTCGATCTGCT +
Preference number: 4 (lower is better)
Translates to: TPAACRRLSGHGAASTSGTPGTR*ALARSA
Trigger: AGCAGATCGAGCGAGAGCTCAACGGGTACCTGGAGT...ACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACGCCTGCATGCAGCAGGCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR TCA 90 bp GCCCGGCCTCAGTGGCAGGAGCCGTGTCCTCCCTCGGTCACTTGCTCTGAGTTTACTCCAGGTACCCGTTaGGCTCTCGCTCGATCTGCT +
Preference number: 4 (lower is better)
Translates to: ARPQWQEPCPPSVTCSEFTPGTR*ALARSA
Trigger: AGCAGATCGAGCGAGAGCTCAACGGGTACCTGGAGT...AAACTCAGAGCAAGTGACCGAGGGAGGACACGGCTCCTGCCACTGAGGCCGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp CGGTTTAGGGTCTGGTGTGTGGTACGAGACCCAGGAAGGCAGGACAGGAAGGGGAGGAGCTTCCCGGCTTaGTGGCCGCCCAGACCACTT +
Preference number: 4 (lower is better)
Translates to: RFRVWCVVRDPGRQDRKGRSFPA*WPPRPL
Trigger: AAGTGGTCTGGGCGGCCATCAAGCCGGGAAGCTCCT...CCCCTTCCTGTCCTGCCTTCCTGGGTCTCGTACCACACACCAGACCCTAAACCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GCTGAGTCCCAGGGTGCAGTGGTAACCGTTGGGCACGCGGCGGAGAGGGTGAGAAGAACATGCCTTTGCTaGCGCCGCCTTGCGATTCGA +
Preference number: 4 (lower is better)
Translates to: AESQGAVVTVGHAAERVRRTCLC*RRLAIR
Trigger: TCGAATCGCAAGGCGGCGTCAGCAAAGGCATGTTCT...TCTCACCCTCTCCGCCGCGTGCCCAACGGTTACCACTGCACCCTGGGACTCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR TCA 90 bp AGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGTAGAACATGCCTTTGCTaGCGCCGCCTTGCGATTCGA +
Preference number: 4 (lower is better)
Translates to: RSRRTFRWALLLCAARPRRTCLC*RRLAIR
Trigger: TCGAATCGCAAGGCGGCGTCAGCAAAGGCATGTTCT...ACGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GCTTGCCTGAGTGAGCATTCGCTGACACTGGCGGGCTGCACAAGCCACGACTGTTTCTCCACAGCCTCGTaGGCAGGCTGCGCCTTGTGC +
Preference number: 4 (lower is better)
Translates to: ACLSEHSLTLAGCTSHDCFSTAS*AGCALC
Trigger: GCACAAGGCGCAGCCTGCTCACGAGGCTGTGGAGAA...ACAGTCGTGGCTTGTGCAGCCCGCCAGTGTCAGCGAATGCTCACTCAGGCAAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp ACGCCTGCTGCATGCAGGCGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTGACTGCCCATGCGAGTaGCGTTCCGCTGATTGTCTG +
Preference number: 4 (lower is better)
Translates to: TPAACRRLSGHGAASTSGDCPCE*RSADCL
Trigger: CAGACAATCAGCGGAACGTCACTCGCATGGGCAGTC...ACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACGCCTGCATGCAGCAGGCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR TCA 90 bp AGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGTGCACCCCAAAGGCGATaGTCTTCAGCACGCATTCCA +
Preference number: 4 (lower is better)
Translates to: RSRRTFRWALLLCAARPRAPQRR*SSARIP
Trigger: TGGAATGCGTGCTGAAGATCATCGCCTTTGGGGTGC...ACGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTCCTGGCGGAGCAGCTTaGTCAGCCGCGCAGCTCGAA +
Preference number: 4 (lower is better)
Translates to: EGRLPRVDDKTHPLEHTPPGGAA*SAAQLE
Trigger: TTCGAGCTGCGCGGCTGATCAAGCTGCTCCGCCAGG...AGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp CCCCTCCGTCCCGAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCCATCAGCGTGGACGTaGAGTGAACAGTCATGTCCT +
Preference number: 4 (lower is better)
Translates to: PLRPEVSAHFQVGPASLCPSAWT*SEQSCP
Trigger: AGGACATGACTGTTCACTTCACGTCCACGCTGATGG...GCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTCGGGACGGAGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GCTGAGTCCCAGGGTGCAGTGGTAACCGTTGGGCACGCGGCGGAGAGGGTGAGAAACTCCGCGTCACACTaGTGCTGCTTTGTCCCAGCT +
Preference number: 4 (lower is better)
Translates to: AESQGAVVTVGHAAERVRNSASH*CCFVPA
Trigger: AGCTGGGACAAAGCAGCATCAGTGTGACGCGGAGTT...TCTCACCCTCTCCGCCGCGTGCCCAACGGTTACCACTGCACCCTGGGACTCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR TCA 90 bp CACAGGAGCCTCACCAAGGTGGGCAAGGCCTCCCCCGAGGGCCGGCTGCCCCGTAGGAGACAGACTCTTTaGTGCCACTCTCTTGGTTTT +
Preference number: 4 (lower is better)
Translates to: HRSLTKVGKASPEGRLPRRRQTL*CHSLGF
Trigger: AAAACCAAGAGAGTGGCATCAAAGAGTCTGTCTCCT...ACGGGGCAGCCGGCCCTCGGGGGAGGCCTTGCCCACCTTGGTGAGGCTCCTGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp ACCCGAGCTGAGTCCCAGGGTGCAGTGGTAACCGTTGGGCACGCGGCGGAGAGGGTTATGCTCTGCATCTaGACGTCCACAGCCAGTGCT +
Preference number: 4 (lower is better)
Translates to: TRAESQGAVVTVGHAAERVMLCI*TSTASA
Trigger: AGCACTGGCTGTGGACGTTCAGATGCAGAGCATAAC...CCTCTCCGCCGCGTGCCCAACGGTTACCACTGCACCCTGGGACTCAGCTCGGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR TCA 90 bp GAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTCACAGCATCCTGCGGTaGTGGATCCCGAGGCCTCGC +
Preference number: 4 (lower is better)
Translates to: EGRLPRVDDKTHPLEHTPHSILR*WIPRPR
Trigger: GCGAGGCCTCGGGATCCATCACCGCAGGATGCTGTG...AGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp CCCGAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCGCTCGATCTGCTGCTaGCGGCGCAGCTTCAGGAAG +
Preference number: 4 (lower is better)
Translates to: PEGRLPRVDDKTHPLEHTRSICC*RRSFRK
Trigger: CTTCCTGAAGCTGCGCCGGCAGCAGCAGATCGAGCG...CGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GCTTGCCTGAGTGAGCATTCGCTGACACTGGCGGGCTGCACAAGCCACGACTGTTCTCGCTCGATCTGCTaGTGCCGGCGCAGCTTCAGG +
Preference number: 4 (lower is better)
Translates to: ACLSEHSLTLAGCTSHDCSRSIC*CRRSFR
Trigger: CCTGAAGCTGCGCCGGCAGCAGCAGATCGAGCGAGA...ACAGTCGTGGCTTGTGCAGCCCGCCAGTGTCAGCGAATGCTCACTCAGGCAAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGGGATCAGGTCATTTCTaGTCTTCTTGGTGGCCGCTC +
Preference number: 4 (lower is better)
Translates to: EVSAHFQVGPASLCRTATGSGHF*SSWWPL
Trigger: GAGCGGCCACCAAGAAGAGCAGAAATGACCTGATCC...CGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp CCCCTCCGTCCCGAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCGGATCAGGTCATTTCTaGTCTTCTTGGTGGCCGCTC +
Preference number: 4 (lower is better)
Translates to: PLRPEVSAHFQVGPASLCGSGHF*SSWWPL
Trigger: GAGCGGCCACCAAGAAGAGCAGAAATGACCTGATCC...GCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTCGGGACGGAGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp CGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTCTTGGTCAGGGTGGTGGTTTGGCCGAGTTCTGCTaGCTGGCGGCGATGGAGATG +
Preference number: 4 (lower is better)
Translates to: RLSGHGAASTSGLGQGGGLAEFC*LAAMEM
Trigger: CATCTCCATCGCCGCCAGGCAGCAGAACTCGGCCAA...ACCACCACCCTGACCAAGACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR GCA 90 bp GTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCCCTTCCACTCGTGGGAGGAGGTTGGCCGAGTTCTGCTaGCTGGCGGCGATGGAGATG +
Preference number: 4 (lower is better)
Translates to: VVSCPVASLETPSTRGRRLAEFC*LAAMEM
Trigger: CATCTCCATCGCCGCCAGGCAGCAGAACTCGGCCAA...CCTCCTCCCACGAGTGGAAGGGGTTTCCAAGGAAGCCACAGGGCAGCTGACCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp TCTTCACCAAACAAGGGACCTCCCAGCATCTTGTGCACCTTGGACAGTGTCCTGGGTGCCGGTGGTGCCTaGGCGGAGGGTCGACGCCCT +
Preference number: 4 (lower is better)
Translates to: SSPNKGPPSILCTLDSVLGAGGA*AEGRRP
Trigger: AGGGCGTCGACCCTCCGCGCAGGCACCACCGGCACC...CAGGACACTGTCCAAGGTGCACAAGATGCTGGGAGGTCCCTTGTTTGGTGAAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp CCCGAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGTCCTGGGCGAGTCTGTaGGCACTGGGTCCTCAGCAG +
Preference number: 4 (lower is better)
Translates to: PEGRLPRVDDKTHPLEHTSWASL*ALGPQQ
Trigger: CTGCTGAGGACCCAGTGCGCACAGACTCGCCCAGGA...CGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp ACGCCTGCTGCATGCAGGCGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTTCGGTGGCATTGGCCTaGTCATCACAGGCCTGGTTG +
Preference number: 4 (lower is better)
Translates to: TPAACRRLSGHGAASTSGSVALA*SSQAWL
Trigger: CAACCAGGCCTGTGATGAGCAGGCCAATGCCACCGA...ACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACGCCTGCATGCAGCAGGCGT
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR GCA 90 bp TCGGCCACCCGAGCTGAGTCCCAGGGTGCAGTGGTAACCGTTGGGCACGCGGCGAGATGGGCATGTTCATaGGAACCAGGCGCTTGTAAG +
Preference number: 4 (lower is better)
Translates to: SATRAESQGAVVTVGHAARWACS*EPGACK
Trigger: CTTACAAGCGCCTGGTTCGCATGAACATGCCCATCT...CGCCGCGTGCCCAACGGTTACCACTGCACCCTGGGACTCAGCTCGGGTGGCCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR GCA 90 bp TGGCGCCAGGACAGTGCTGGGCATCAGGTGCCCGGCCTCAGTGGCAGGAGCCGTAGATGGGCATGTTCATaGGAACCAGGCGCTTGTAAG +
Preference number: 4 (lower is better)
Translates to: WRQDSAGHQVPGLSGRSRRWACS*EPGACK
Trigger: CTTACAAGCGCCTGGTTCGCATGAACATGCCCATCT...ACGGCTCCTGCCACTGAGGCCGGGCACCTGATGCCCAGCACTGTCCTGGCGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GTGCAGCTAGCACCAGTGGTCTTGGTCAGGGTGGTGGTAGCTGTGCCGTGCTCGAGGCCTCCAGGAGCCTaGTGCATCTGGTCTCTGGTG +
Preference number: 4 (lower is better)
Translates to: VQLAPVVLVRVVVAVPCSRPPGA*CIWSLV
Trigger: CACCAGAGACCAGATGCAGCAGGCTCCTGGAGGCCT...CGAGCACGGCACAGCTACCACCACCCTGACCAAGACCACTGGTGCTAGCTGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR GCA 90 bp CCCGAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGGGTCCGGGGTGGTGCTaGAAAGATGAGTCCCACGGG +
Preference number: 4 (lower is better)
Translates to: PEGRLPRVDDKTHPLEHTGPGWC*KDESHG
Trigger: CCCGTGGGACTCATCTTTGCAGCACCACCCCGGACC...CGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GCCCGGCCTCAGTGGCAGGAGCCGTGTCCTCCCTCGGTCACTTGCTCTGAGTTTACTGGAACACACGCCTaGTGCATGCAGGCGTCTGAG +
Preference number: 4 (lower is better)
Translates to: ARPQWQEPCPPSVTCSEFTGTHA*CMQASE
Trigger: CTCAGACGCCTGCATGCAGCAGGCGTGTGTTCCAGT...AAACTCAGAGCAAGTGACCGAGGGAGGACACGGCTCCTGCCACTGAGGCCGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp AGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGTCACCATGACATCCAGTaGTCTCCACTGGCAAGGGCT +
Preference number: 4 (lower is better)
Translates to: RSRRTFRWALLLCAARPRHHDIQ*SPLARA
Trigger: AGCCCTTGCCAGTGGAGAGCACTGGATGTCATGGTG...ACGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp AGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGTAAGCACGTGGTCAGCTaGCCTGTGGCTTCCTTGGAA +
Preference number: 4 (lower is better)
Translates to: RSRRTFRWALLLCAARPRKHVVS*PVASLE
Trigger: TTCCAAGGAAGCCACAGGGCAGCTGACCACGTGCTT...ACGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCCCTTCCACTCGTGGGAGGAGGCCTCACTTGACTGCCTaGTCCCTGTGTCTGGCGCCA +
Preference number: 4 (lower is better)
Translates to: VVSCPVASLETPSTRGRRPHLTA*SLCLAP
Trigger: TGGCGCCAGACACAGGGAGCAGGCAGTCAAGTGAGG...CCTCCTCCCACGAGTGGAAGGGGTTTCCAAGGAAGCCACAGGGCAGCTGACCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GCCCGGCCTCAGTGGCAGGAGCCGTGTCCTCCCTCGGTCACTTGCTCTGAGTTTCAGACCTCACTTGACTaGCTGCTCCCTGTGTCTGGC +
Preference number: 4 (lower is better)
Translates to: ARPQWQEPCPPSVTCSEFQTSLD*LLPVSG
Trigger: GCCAGACACAGGGAGCAGGCAGTCAAGTGAGGTCTG...AAACTCAGAGCAAGTGACCGAGGGAGGACACGGCTCCTGCCACTGAGGCCGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp TGGCGCCAGGACAGTGCTGGGCATCAGGTGCCCGGCCTCAGTGGCAGGAGCCGTAGCACAGTGATCACATaGACAGTCCGAGATTCCTGG +
Preference number: 4 (lower is better)
Translates to: WRQDSAGHQVPGLSGRSRSTVIT*TVRDSW
Trigger: CCAGGAATCTCGGACTGTGCATGTGATCACTGTGCT...ACGGCTCCTGCCACTGAGGCCGGGCACCTGATGCCCAGCACTGTCCTGGCGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp TTGGTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGCCACCCGAGCTGAGTCCCAGCCGCATCTGTGCTGTTaGGGAAACAGGCCTTGTGGA +
Preference number: 4 (lower is better)
Translates to: LVRVVVAVPCSATRAESQPHLCC*GNRPCG
Trigger: TCCACAAGGCCTGTTTCCCCAACAGCACAGATGCGG...CTGGGACTCAGCTCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGACCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp AGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGTCCGCATCTGTGCTGTTaGGGAAACAGGCCTTGTGGA +
Preference number: 4 (lower is better)
Translates to: RSRRTFRWALLLCAARPRPHLCC*GNRPCG
Trigger: TCCACAAGGCCTGTTTCCCCAACAGCACAGATGCGG...ACGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTCTTGGTCAGGGTGGTGGTCCCTCTCTCGCTCCTTaGCAAACTCCCCCGAGAGCA +
Preference number: 4 (lower is better)
Translates to: RLSGHGAASTSGLGQGGGPSLAP*QTPPRA
Trigger: TGCTCTCGGGGGAGTTTGCCAAGGAGCGAGAGAGGG...ACCACCACCCTGACCAAGACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp CCTGCTGCATGCAGGCGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTCTTCCCTCTCTCGCTCCTTaGCAAACTCCCCCGAGAGCA +
Preference number: 4 (lower is better)
Translates to: PAACRRLSGHGAASTSGLPSLAP*QTPPRA
Trigger: TGCTCTCGGGGGAGTTTGCCAAGGAGCGAGAGAGGG...AAGACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACGCCTGCATGCAGCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp TCGGCCACCCGAGCTGAGTCCCAGGGTGCAGTGGTAACCGTTGGGCACGCGGCGCATTTCTGCTCTTCTTaGTGGCCGCTCTCTTCAGCA +
Preference number: 4 (lower is better)
Translates to: SATRAESQGAVVTVGHAAHFCSS*WPLSSA
Trigger: TGCTGAAGAGAGCGGCCACCAAGAAGAGCAGAAATG...CGCCGCGTGCCCAACGGTTACCACTGCACCCTGGGACTCAGCTCGGGTGGCCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp ACCCGAGCTGAGTCCCAGGGTGCAGTGGTAACCGTTGGGCACGCGGCGGAGAGGGTGGGAGTCTCATCCTaGAAGTTGAACTGTCCCCCA +
Preference number: 4 (lower is better)
Translates to: TRAESQGAVVTVGHAAERVGVSS*KLNCPP
Trigger: TGGGGGACAGTTCAACTTCCAGGATGAGACTCCCAC...CCTCTCCGCCGCGTGCCCAACGGTTACCACTGCACCCTGGGACTCAGCTCGGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp CCCCTCCGTCCCGAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCGTGGGAGTCTCATCCTaGAAGTTGAACTGTCCCCCA +
Preference number: 4 (lower is better)
Translates to: PLRPEVSAHFQVGPASLCVGVSS*KLNCPP
Trigger: TGGGGGACAGTTCAACTTCCAGGATGAGACTCCCAC...GCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTCGGGACGGAGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CGGTTTAGGGTCTGGTGTGTGGTACGAGACCCAGGAAGGCAGGACAGGAAGGGGGCTGCCTGGCGGCGATaGAGATGTTCGCGGCAGACA +
Preference number: 4 (lower is better)
Translates to: RFRVWCVVRDPGRQDRKGAAWRR*RCSRQT
Trigger: TGTCTGCCGCGAACATCTCCATCGCCGCCAGGCAGC...CCCCTTCCTGTCCTGCCTTCCTGGGTCTCGTACCACACACCAGACCCTAAACCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GCGGTCACGGTGCAGCTAGCACCAGTGGTCTTGGTCAGGGTGGTGGTAGCTGTGCCGAGTTCTGCTGCCTaGCGGCGATGGAGATGTTCG +
Preference number: 4 (lower is better)
Translates to: AVTVQLAPVVLVRVVVAVPSSAA*RRWRCS
Trigger: CGAACATCTCCATCGCCGCCAGGCAGCAGAACTCGG...CACAGCTACCACCACCCTGACCAAGACCACTGGTGCTAGCTGCACCGTGACCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp GCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGTTCTGCAGCCGTAGCTaGCTGGCCCGCTGCTCCCAC +
Preference number: 4 (lower is better)
Translates to: AGCPVWMIKLIHWNTRLLFCSRS*LARCSH
Trigger: GTGGGAGCAGCGGGCCAGCCAGCTACGGCTGCAGAA...CAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGCATGCAGGCTTGTCGCGGTGCCGGTaGTGCCTGCGCGGAGGGTCG +
Preference number: 4 (lower is better)
Translates to: PVWMIKLIHWNTRLLHAGLSRCR*CLRGGS
Trigger: CGACCCTCCGCGCAGGCACCACCGGCACCGCGACAA...GCCTGCATGCAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GCTGAGTCCCAGGGTGCAGTGGTAACCGTTGGGCACGCGGCGGAGAGGGTGAGACAGTCACAGTCCCACTaGTCTCCAGGTCACAGTGTG +
Preference number: 4 (lower is better)
Translates to: AESQGAVVTVGHAAERVRQSQSH*SPGHSV
Trigger: CACACTGTGACCTGGAGACCAGTGGGACTGTGACTG...TCTCACCCTCTCCGCCGCGTGCCCAACGGTTACCACTGCACCCTGGGACTCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp TGGCGCCAGGACAGTGCTGGGCATCAGGTGCCCGGCCTCAGTGGCAGGAGCCGTCCCTCTCCAGCTCCTTaGATTCATCTGTGCAGTAGA +
Preference number: 4 (lower is better)
Translates to: WRQDSAGHQVPGLSGRSRPSPAP*IHLCSR
Trigger: TCTACTGCACAGATGAATCCAAGGAGCTGGAGAGGG...ACGGCTCCTGCCACTGAGGCCGGGCACCTGATGCCCAGCACTGTCCTGGCGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GCCCGGCCTCAGTGGCAGGAGCCGTGTCCTCCCTCGGTCACTTGCTCTGAGTTTAGTGTTTCAGCACCATaGGCCAGCCTTCTCCCGTGG +
Preference number: 4 (lower is better)
Translates to: ARPQWQEPCPPSVTCSEFSVSAP*ASLLPW
Trigger: CCACGGGAGAAGGCTGGCCCATGGTGCTGAAACACT...AAACTCAGAGCAAGTGACCGAGGGAGGACACGGCTCCTGCCACTGAGGCCGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTCTTGGTCAGGGTGGTGGTGCGGTACCCAGGGCTTaGACCCTGCTCCTCATAGGT +
Preference number: 4 (lower is better)
Translates to: RLSGHGAASTSGLGQGGGAVPRA*TLLLIG
Trigger: ACCTATGAGGAGCAGGGTCCAAGCCCTGGGTACCGC...ACCACCACCCTGACCAAGACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp GCACCAGTGGTCTTGGTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGCCACCCGAAACGACTGCCGGTTTTaGGGCATGTACCGTGTCAGG +
Preference number: 4 (lower is better)
Translates to: APVVLVRVVVAVPCSATRNDCRF*GMYRVR
Trigger: CCTGACACGGTACATGCCCCAAAACCGGCAGTCGTT...TCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGACCAAGACCACTGGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp AGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGTAACGACTGCCGGTTTTaGGGCATGTACCGTGTCAGG +
Preference number: 4 (lower is better)
Translates to: RSRRTFRWALLLCAARPRNDCRF*GMYRVR
Trigger: CCTGACACGGTACATGCCCCAAAACCGGCAGTCGTT...ACGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp TCGGCCACCCGAGCTGAGTCCCAGGGTGCAGTGGTAACCGTTGGGCACGCGGCGGTCCACGTCTTATACTaGAACGACTGCCGGTTTTGG +
Preference number: 4 (lower is better)
Translates to: SATRAESQGAVVTVGHAAVHVLY*NDCRFW
Trigger: CCAAAACCGGCAGTCGTTCCAGTATAAGACGTGGAC...CGCCGCGTGCCCAACGGTTACCACTGCACCCTGGGACTCAGCTCGGGTGGCCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp GTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGCCACCCGAGCTGAGTCCCAGGGTGTCCGGAAGTTGTTGTaGCGGTTGATGCTGGTGTCA +
Preference number: 4 (lower is better)
Translates to: VRVVVAVPCSATRAESQGVRKLL*RLMLVS
Trigger: TGACACCAGCATCAACCGCCACAACAACTTCCGGAC...ACCCTGGGACTCAGCTCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp GCTGTGCCGTGCTCGGCCACCCGAGCTGAGTCCCAGGGTGCAGTGGTAACCGTTCACTTCCACACTCGGTaGCATTGGCCTGCTCATCAC +
Preference number: 4 (lower is better)
Translates to: AVPCSATRAESQGAVVTVHFHTR*HWPAHH
Trigger: GTGATGAGCAGGCCAATGCCACCGAGTGTGGAAGTG...AACGGTTACCACTGCACCCTGGGACTCAGCTCGGGTGGCCGAGCACGGCACAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp GAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGGGAGCCTGCTGCATCTaGTCTCTGGTGGTTTTGTTC +
Preference number: 4 (lower is better)
Translates to: EVSAHFQVGPASLCRTATGACCI*SLVVLF
Trigger: GAACAAAACCACCAGAGACCAGATGCAGCAGGCTCC...CGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GGATTCTCGACCCAACACTGCCTGGGGAAATGGCTGTGGTTCTGCATGGAATGGGAGGCCGCTCGACCCTaGCTCTCCAGCCCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: GFSTQHCLGKWLWFCMEWEAARP*LSSPGW
Trigger: CCAGCCTGGGCTGGAGAGCCAGGGTCGAGCGGCCTC...CCATTCCATGCAGAACCACAGCCATTTCCCCAGGCAGTGTTGGGTCGAGAATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GAAAATGCCTCACACAAGCACGTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCGTCCCACGGGGCCGCTaGGCCAGCGTGGAGATGGAG +
Preference number: 4 (lower is better)
Translates to: ENASHKHVVSCPVASLETVPRGR*ASVEME
Trigger: CTCCATCTCCACGCTGGCCCAGCGGCCCCGTGGGAC...GGTTTCCAAGGAAGCCACAGGGCAGCTGACCACGTGCTTGTGTGAGGCATTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGCATGCAGGCTGGTGCGACGACGCCTaGCTAGGGGGTGGGCGGTCC +
Preference number: 4 (lower is better)
Translates to: PVWMIKLIHWNTRLLHAGWCDDA*LGGGRS
Trigger: GGACCGCCCACCCCCTAGCCAGGCGTCGTCGCACCA...GCCTGCATGCAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CTCGTGGGAGGAGGACAGCAAATGGCTGCCTTGTTTGCCACCATGACATCCAGTTGGTGCGACGACGCCTaGCTAGGGGGTGGGCGGTCC +
Preference number: 4 (lower is better)
Translates to: LVGGGQQMAALFATMTSSWCDDA*LGGGRS
Trigger: GGACCGCCCACCCCCTAGCCAGGCGTCGTCGCACCA...ACTGGATGTCATGGTGGCAAACAAGGCAGCCATTTGCTGTCCTCCTCCCACGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTCAGCGGTGGTGGTGGTaGTGCGACGACGCCTGGCTA +
Preference number: 4 (lower is better)
Translates to: EGRLPRVDDKTHPLEHTPQRWWW*CDDAWL
Trigger: TAGCCAGGCGTCGTCGCACCACCACCACCACCGCTG...AGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GAAAATGCCTCACACAAGCACGTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCCGGTGGCAGCGGTGGTaGTGGTGGTGCGACGACGCC +
Preference number: 4 (lower is better)
Translates to: ENASHKHVVSCPVASLETRWQRW*WWCDDA
Trigger: GGCGTCGTCGCACCACCACCACCACCGCTGCCACCG...GGTTTCCAAGGAAGCCACAGGGCAGCTGACCACGTGCTTGTGTGAGGCATTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CCCGAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGGTTGGCGACGTTGGGTaGCTGCTGAGGGAGGGCTTG +
Preference number: 4 (lower is better)
Translates to: PEGRLPRVDDKTHPLEHTVGDVG*LLREGL
Trigger: CAAGCCCTCCCTCAGCAGCCACCCAACGTCGCCAAC...CGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CGGTTTAGGGTCTGGTGTGTGGTACGAGACCCAGGAAGGCAGGACAGGAAGGGGCTCCTGGCCAGCTGTTaGCGACGTTGGGTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: RFRVWCVVRDPGRQDRKGLLASC*RRWVAA
Trigger: AGCAGCCACCCAACGTCGCCAACAGCTGGCCAGGAG...CCCCTTCCTGTCCTGCCTTCCTGGGTCTCGTACCACACACCAGACCCTAAACCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GCTTGCCTGAGTGAGCATTCGCTGACACTGGCGGGCTGCACAAGCCACGACTGTTCCTCAGGCAGGGCGTaGACAGAGGCCTCACTGTCC +
Preference number: 4 (lower is better)
Translates to: ACLSEHSLTLAGCTSHDCSSGRA*TEASLS
Trigger: GGACAGTGAGGCCTCTGTCCACGCCCTGCCTGAGGA...ACAGTCGTGGCTTGTGCAGCCCGCCAGTGTCAGCGAATGCTCACTCAGGCAAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp TTGGTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGCCACCCGAGCTGAGTCCCAGGCCGGCTGCCCCGTGTaGATGATAAAACTCATCCAC +
Preference number: 4 (lower is better)
Translates to: LVRVVVAVPCSATRAESQAGCPV*MIKLIH
Trigger: GTGGATGAGTTTTATCATCCACACGGGGCAGCCGGC...CTGGGACTCAGCTCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGACCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp TGGCGCCAGGACAGTGCTGGGCATCAGGTGCCCGGCCTCAGTGGCAGGAGCCGTCATATACTCGAATGGTaGCCACTCGGTGATGCGCTT +
Preference number: 4 (lower is better)
Translates to: WRQDSAGHQVPGLSGRSRHILEW*PLGDAL
Trigger: AAGCGCATCACCGAGTGGCCACCATTCGAGTATATG...ACGGCTCCTGCCACTGAGGCCGGGCACCTGATGCCCAGCACTGTCCTGGCGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371355.8
CDS-3UTR CCA 90 bp GGATTCTCGACCCAACACTGCCTGGGGAAATGGCTGTGGTTCTGCATGGAATGGGGAGTCAGGGGCGTCTaGGGGAGCTGCCTCCGCCCA +
Preference number: 4 (lower is better)
Translates to: GFSTQHCLGKWLWFCMEWGVRGV*GSCLRP
Trigger: TGGGCGGAGGCAGCTCCCCCAGACGCCCCTGACTCC...CCATTCCATGCAGAACCACAGCCATTTCCCCAGGCAGTGTTGGGTCGAGAATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GCTTGCCTGAGTGAGCATTCGCTGACACTGGCGGGCTGCACAAGCCACGACTGTCCGTCTACGTCCACCTaGACCGGACAGGGCTGCACA +
Preference number: 4 (lower is better)
Translates to: ACLSEHSLTLAGCTSHDCPSTST*TGQGCT
Trigger: TGTGCAGCCCTGTCCGGTCCAGGTGGACGTAGACGG...ACAGTCGTGGCTTGTGCAGCCCGCCAGTGTCAGCGAATGCTCACTCAGGCAAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GCCCGGCCTCAGTGGCAGGAGCCGTGTCCTCCCTCGGTCACTTGCTCTGAGTTTTGGCGGTCAGGCACTTaGTCAAGAGCAGCAGAGCCA +
Preference number: 4 (lower is better)
Translates to: ARPQWQEPCPPSVTCSEFWRSGT*SRAAEP
Trigger: TGGCTCTGCTGCTCTTGACCAAGTGCCTGACCGCCA...AAACTCAGAGCAAGTGACCGAGGGAGGACACGGCTCCTGCCACTGAGGCCGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CCACGTGAAGGGTGCTCCCCACAGGACGCAGAGCTCCTCACAACGGCTCCAAGCGCCCTGTGGCTTCCTTaGAAACCCCTTCCACTCGTG +
Preference number: 4 (lower is better)
Translates to: PREGCSPQDAELLTTAPSALWLP*KPLPLV
Trigger: CACGAGTGGAAGGGGTTTCCAAGGAAGCCACAGGGC...GCTTGGAGCCGTTGTGAGGAGCTCTGCGTCCTGTGGGGAGCACCCTTCACGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CTCGTGGGAGGAGGACAGCAAATGGCTGCCTTGTTTGCCACCATGACATCCAGTGGTGCCCGGCCTCAGTaGCAGGAGCCGTGTCCTCCC +
Preference number: 4 (lower is better)
Translates to: LVGGGQQMAALFATMTSSGARPQ*QEPCPP
Trigger: GGGAGGACACGGCTCCTGCCACTGAGGCCGGGCACC...ACTGGATGTCATGGTGGCAAACAAGGCAGCCATTTGCTGTCCTCCTCCCACGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GGATTCTCGACCCAACACTGCCTGGGGAAATGGCTGTGGTTCTGCATGGAATGGGGTGCCCGGCCTCAGTaGCAGGAGCCGTGTCCTCCC +
Preference number: 4 (lower is better)
Translates to: GFSTQHCLGKWLWFCMEWGARPQ*QEPCPP
Trigger: GGGAGGACACGGCTCCTGCCACTGAGGCCGGGCACC...CCATTCCATGCAGAACCACAGCCATTTCCCCAGGCAGTGTTGGGTCGAGAATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp AGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGTACACCCAAGATAACATaGGCTGGGGGCTGGGGAACA +
Preference number: 4 (lower is better)
Translates to: RSRRTFRWALLLCAARPRTPKIT*AGGWGT
Trigger: TGTTCCCCAGCCCCCAGCCCATGTTATCTTGGGTGT...ACGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp TCCAGGGAGGACAGAGCTTGCCTGAGTGAGCATTCGCTGACACTGGCGGGCTGCACTCCAGGTACCCGTTaGGCTCTCGCTCGATCTGCT +
Preference number: 4 (lower is better)
Translates to: SREDRACLSEHSLTLAGCTPGTR*ALARSA
Trigger: AGCAGATCGAGCGAGAGCTCAACGGGTACCTGGAGT...GCAGCCCGCCAGTGTCAGCGAATGCTCACTCAGGCAAGCTCTGTCCTCCCTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp CGGTTTAGGGTCTGGTGTGTGGTACGAGACCCAGGAAGGCAGGACAGGAAGGGGGGATCTGGAAGACAGTaGGGATGGCGGCAGGGAAGG +
Preference number: 4 (lower is better)
Translates to: RFRVWCVVRDPGRQDRKGGSGRQ*GWRQGR
Trigger: CCTTCCCTGCCGCCATCCTCACTGTCTTCCAGATCC...CCCCTTCCTGTCCTGCCTTCCTGGGTCTCGTACCACACACCAGACCCTAAACCG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp ACGCCTGCTGCATGCAGGCGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTAGAACATGCCTTTGCTaGCGCCGCCTTGCGATTCGA +
Preference number: 4 (lower is better)
Translates to: TPAACRRLSGHGAASTSGRTCLC*RRLAIR
Trigger: TCGAATCGCAAGGCGGCGTCAGCAAAGGCATGTTCT...ACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACGCCTGCATGCAGCAGGCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR TCA 90 bp GAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTTTCTCCACAGCCTCGTaGGCAGGCTGCGCCTTGTGC +
Preference number: 4 (lower is better)
Translates to: EGRLPRVDDKTHPLEHTPFSTAS*AGCALC
Trigger: GCACAAGGCGCAGCCTGCTCACGAGGCTGTGGAGAA...AGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp TCCAGGGAGGACAGAGCTTGCCTGAGTGAGCATTCGCTGACACTGGCGGGCTGCCGAGTGACGTTCCGCTaGTTGTCTGCATCCTCTGGC +
Preference number: 4 (lower is better)
Translates to: SREDRACLSEHSLTLAGCRVTFR*LSASSG
Trigger: GCCAGAGGATGCAGACAATCAGCGGAACGTCACTCG...GCAGCCCGCCAGTGTCAGCGAATGCTCACTCAGGCAAGCTCTGTCCTCCCTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp TCCAGGGAGGACAGAGCTTGCCTGAGTGAGCATTCGCTGACACTGGCGGGCTGCGACTGCCCATGCGAGTaGCGTTCCGCTGATTGTCTG +
Preference number: 4 (lower is better)
Translates to: SREDRACLSEHSLTLAGCDCPCE*RSADCL
Trigger: CAGACAATCAGCGGAACGTCACTCGCATGGGCAGTC...GCAGCCCGCCAGTGTCAGCGAATGCTCACTCAGGCAAGCTCTGTCCTCCCTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GCTGTGCCGTGCTCGGCCACCCGAGCTGAGTCCCAGGGTGCAGTGGTAACCGTTAGAACAGCATGGCAATaGGCAGACACACGTAGGGCA +
Preference number: 4 (lower is better)
Translates to: AVPCSATRAESQGAVVTVRTAWQ*ADTRRA
Trigger: TGCCCTACGTGTGTCTGCTCATTGCCATGCTGTTCT...AACGGTTACCACTGCACCCTGGGACTCAGCTCGGGTGGCCGAGCACGGCACAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR TCA 90 bp AGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGTAGAACAGCATGGCAATaGGCAGACACACGTAGGGCA +
Preference number: 4 (lower is better)
Translates to: RSRRTFRWALLLCAARPRRTAWQ*ADTRRA
Trigger: TGCCCTACGTGTGTCTGCTCATTGCCATGCTGTTCT...ACGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp TGGCGCCAGGACAGTGCTGGGCATCAGGTGCCCGGCCTCAGTGGCAGGAGCCGTAGGAGCACAGGAAGATaGAGGAGACGAAGTAGAAGT +
Preference number: 4 (lower is better)
Translates to: WRQDSAGHQVPGLSGRSRRSTGR*RRRSRS
Trigger: ACTTCTACTTCGTCTCCTTCATCTTCCTGTGCTCCT...ACGGCTCCTGCCACTGAGGCCGGGCACCTGATGCCCAGCACTGTCCTGGCGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp TTGGTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGCCACCCGAGCTGAGTCCCAGCCATCAGCGTGGACGTaGAGTGAACAGTCATGTCCT +
Preference number: 4 (lower is better)
Translates to: LVRVVVAVPCSATRAESQPSAWT*SEQSCP
Trigger: AGGACATGACTGTTCACTTCACGTCCACGCTGATGG...CTGGGACTCAGCTCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGACCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR TCA 90 bp CCCGAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCAGCCTCCTCGAAAGTaGGAGTGTCCTCAGGCAGGG +
Preference number: 4 (lower is better)
Translates to: PEGRLPRVDDKTHPLEHTQPPRK*ECPQAG
Trigger: CCCTGCCTGAGGACACTCTCACTTTCGAGGAGGCTG...CGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp CCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGCATGCAGGCACGCGGCGGAGAGGGTaGGACTGGGAGGTCAGGGAG +
Preference number: 4 (lower is better)
Translates to: PVWMIKLIHWNTRLLHAGTRRRG*DWEVRE
Trigger: CTCCCTGACCTCCCAGTCTCACCCTCTCCGCCGCGT...GCCTGCATGCAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GAAAATGCCTCACACAAGCACGTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCCTCGGCCACCCGAGCTaGGTCCCAGGGTGCAGTGGT +
Preference number: 4 (lower is better)
Translates to: ENASHKHVVSCPVASLETLGHPS*VPGCSG
Trigger: ACCACTGCACCCTGGGACTCAGCTCGGGTGGCCGAG...GGTTTCCAAGGAAGCCACAGGGCAGCTGACCACGTGCTTGTGTGAGGCATTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GCCCGGCCTCAGTGGCAGGAGCCGTGTCCTCCCTCGGTCACTTGCTCTGAGTTTGCTAGCACCAGATGTTaGCAGCAAGGGGCTCCCATT +
Preference number: 4 (lower is better)
Translates to: ARPQWQEPCPPSVTCSEFASTRC*QQGAPI
Trigger: AATGGGAGCCCCTTGCTGTCAACATCTGGTGCTAGC...AAACTCAGAGCAAGTGACCGAGGGAGGACACGGCTCCTGCCACTGAGGCCGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTTGGCCGTCTTGTAGGTaGTGCTGGGGCGGGGAGTCA +
Preference number: 4 (lower is better)
Translates to: EGRLPRVDDKTHPLEHTPWPSCR*CWGGES
Trigger: TGACTCCCCGCCCCAGCATCACCTACAAGACGGCCA...AGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCCCTTCCACTCGTGGGAGGAGGACCCATGCTGGATGCTaGGTCCCAGGACACGGGATT +
Preference number: 4 (lower is better)
Translates to: VVSCPVASLETPSTRGRRTHAGC*VPGHGI
Trigger: AATCCCGTGTCCTGGGACTCAGCATCCAGCATGGGT...CCTCCTCCCACGAGTGGAAGGGGTTTCCAAGGAAGCCACAGGGCAGCTGACCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp CCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGCATGCAGGCTGCCGCACGGCCACGTaGAGGGTGCTCCCCACAGGA +
Preference number: 4 (lower is better)
Translates to: PVWMIKLIHWNTRLLHAGCRTAT*RVLPTG
Trigger: TCCTGTGGGGAGCACCCTTCACGTGGCCGTGCGGCA...GCCTGCATGCAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp CTCGTGGGAGGAGGACAGCAAATGGCTGCCTTGTTTGCCACCATGACATCCAGTTGCCGCACGGCCACGTaGAGGGTGCTCCCCACAGGA +
Preference number: 4 (lower is better)
Translates to: LVGGGQQMAALFATMTSSCRTAT*RVLPTG
Trigger: TCCTGTGGGGAGCACCCTTCACGTGGCCGTGCGGCA...ACTGGATGTCATGGTGGCAAACAAGGCAGCCATTTGCTGTCCTCCTCCCACGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GCTAGGCTGTGTGGGTTTAGAAAAGTGGATTCTCGACCCAACACTGCCTGGGGACCAGGAGCCTGGGTGTaGGGGCCTGGCGGTCAGGCA +
Preference number: 4 (lower is better)
Translates to: ARLCGFRKVDSRPNTAWGPGAWV*GPGGQA
Trigger: TGCCTGACCGCCAGGCCCTCACACCCAGGCTCCTGG...TCCCCAGGCAGTGTTGGGTCGAGAATCCACTTTTCTAAACCCACACAGCCTAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp TCTTCACCAAACAAGGGACCTCCCAGCATCTTGTGCACCTTGGACAGTGTCCTGCCAGGAGCCTGGGTGTaGGGGCCTGGCGGTCAGGCA +
Preference number: 4 (lower is better)
Translates to: SSPNKGPPSILCTLDSVLPGAWV*GPGGQA
Trigger: TGCCTGACCGCCAGGCCCTCACACCCAGGCTCCTGG...CAGGACACTGTCCAAGGTGCACAAGATGCTGGGAGGTCCCTTGTTTGGTGAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCCCTTCCACTCGTGGGAGGAGGTGGTCACAATCATGCTaGACCCCGAGACCAGGCAGC +
Preference number: 4 (lower is better)
Translates to: VVSCPVASLETPSTRGRRWSQSC*TPRPGS
Trigger: GCTGCCTGGTCTCGGGGTTCAGCATGATTGTGACCA...CCTCCTCCCACGAGTGGAAGGGGTTTCCAAGGAAGCCACAGGGCAGCTGACCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp AGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGTGGATCAGGTCATTTCTaGTCTTCTTGGTGGCCGCTC +
Preference number: 4 (lower is better)
Translates to: RSRRTFRWALLLCAARPRGSGHF*SSWWPL
Trigger: GAGCGGCCACCAAGAAGAGCAGAAATGACCTGATCC...ACGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp CCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGCATGCAGGCCGCCGGCGCACTCCTTaGTCGGATCCTGGTGCCGGT +
Preference number: 4 (lower is better)
Translates to: PVWMIKLIHWNTRLLHAGRRRTP*SDPGAG
Trigger: ACCGGCACCAGGATCCGAGCAAGGAGTGCGCCGGCG...GCCTGCATGCAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GGATTCTCGACCCAACACTGCCTGGGGAAATGGCTGTGGTTCTGCATGGAATGGCGCCGGCGCACTCCTTaGTCGGATCCTGGTGCCGGT +
Preference number: 4 (lower is better)
Translates to: GFSTQHCLGKWLWFCMEWRRRTP*SDPGAG
Trigger: ACCGGCACCAGGATCCGAGCAAGGAGTGCGCCGGCG...CCATTCCATGCAGAACCACAGCCATTTCCCCAGGCAGTGTTGGGTCGAGAATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp CCTGCTGCATGCAGGCGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTCTTGTGCTGGGCAGTGTGTaGATGGGACCCACAGTCACA +
Preference number: 4 (lower is better)
Translates to: PAACRRLSGHGAASTSGLVLGSV*MGPTVT
Trigger: TGTGACTGTGGGTCCCATGCACACACTGCCCAGCAC...AAGACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACGCCTGCATGCAGCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR GCA 90 bp TCCAGGGAGGACAGAGCTTGCCTGAGTGAGCATTCGCTGACACTGGCGGGCTGCCCTTCTGGAGACAGGTaGTGGGCAGTGTGTGCATGG +
Preference number: 4 (lower is better)
Translates to: SREDRACLSEHSLTLAGCPSGDR*WAVCAW
Trigger: CCATGCACACACTGCCCAGCACCTGTCTCCAGAAGG...GCAGCCCGCCAGTGTCAGCGAATGCTCACTCAGGCAAGCTCTGTCCTCCCTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp AGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGTGTTCCGCTGATTGTCTaGATCCTCTGGCTGTTCCTC +
Preference number: 4 (lower is better)
Translates to: RSRRTFRWALLLCAARPRVPLIV*ILWLFL
Trigger: GAGGAACAGCCAGAGGATGCAGACAATCAGCGGAAC...ACGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GCGGTCACGGTGCAGCTAGCACCAGTGGTCTTGGTCAGGGTGGTGGTAGCTGTGAGATGGACAGCTCCATaGGGTACCCAGGGCTTGGAC +
Preference number: 4 (lower is better)
Translates to: AVTVQLAPVVLVRVVVAVRWTAP*GTQGLD
Trigger: GTCCAAGCCCTGGGTACCGCATGGAGCTGTCCATCT...CACAGCTACCACCACCCTGACCAAGACCACTGGTGCTAGCTGCACCGTGACCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR GCA 90 bp CGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTCTTGGTCAGGGTGGTGGTCAGCTTGATCTCCAGTaGCGTCCGGATGAGGGCCAT +
Preference number: 4 (lower is better)
Translates to: RLSGHGAASTSGLGQGGGQLDLQ*RPDEGH
Trigger: ATGGCCCTCATCCGGACGGCACTGGAGATCAAGCTG...ACCACCACCCTGACCAAGACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR GCA 90 bp GTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCCCTTCCACTCGTGGGAGGAGGCAGCTTGATCTCCAGTaGCGTCCGGATGAGGGCCAT +
Preference number: 4 (lower is better)
Translates to: VVSCPVASLETPSTRGRRQLDLQ*RPDEGH
Trigger: ATGGCCCTCATCCGGACGGCACTGGAGATCAAGCTG...CCTCCTCCCACGAGTGGAAGGGGTTTCCAAGGAAGCCACAGGGCAGCTGACCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp CCCGAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGAGGCCTCCAGGAGCCTaGTGCATCTGGTCTCTGGTG +
Preference number: 4 (lower is better)
Translates to: PEGRLPRVDDKTHPLEHTRPPGA*CIWSLV
Trigger: CACCAGAGACCAGATGCAGCAGGCTCCTGGAGGCCT...CGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp CGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTCTTGGTCAGGGTGGTGGTGGCCCCTCCGGGTTATaGTCTGCATCTGAACGTCCA +
Preference number: 4 (lower is better)
Translates to: RLSGHGAASTSGLGQGGGGPSGL*SASERP
Trigger: TGGACGTTCAGATGCAGAGCATAACCCGGAGGGGCC...ACCACCACCCTGACCAAGACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR GCA 90 bp GCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGGGTCCGGGGTGGTGCTaGAAAGATGAGTCCCACGGG +
Preference number: 4 (lower is better)
Translates to: AGCPVWMIKLIHWNTRLLGPGWC*KDESHG
Trigger: CCCGTGGGACTCATCTTTGCAGCACCACCCCGGACC...CAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGGGCGGTCCGGGGTGGTaGTGCAAAGATGAGTCCCAC +
Preference number: 4 (lower is better)
Translates to: AGCPVWMIKLIHWNTRLLGGPGW*CKDESH
Trigger: GTGGGACTCATCTTTGCAGCACCACCCCGGACCGCC...CAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp CTCGTGGGAGGAGGACAGCAAATGGCTGCCTTGTTTGCCACCATGACATCCAGTCGGTGGTGGTGGTGGTaGGACGACGCCTGGCTAGGG +
Preference number: 4 (lower is better)
Translates to: LVGGGQQMAALFATMTSSRWWWW*DDAWLG
Trigger: CCCTAGCCAGGCGTCGTCGCACCACCACCACCACCG...ACTGGATGTCATGGTGGCAAACAAGGCAGCCATTTGCTGTCCTCCTCCCACGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GAAAATGCCTCACACAAGCACGTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCCGGTGGTGGTGGTGGTaGGACGACGCCTGGCTAGGG +
Preference number: 4 (lower is better)
Translates to: ENASHKHVVSCPVASLETRWWWW*DDAWLG
Trigger: CCCTAGCCAGGCGTCGTCGCACCACCACCACCACCG...GGTTTCCAAGGAAGCCACAGGGCAGCTGACCACGTGCTTGTGTGAGGCATTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp CCCGAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCGGCCCCACAGCACTaGTTGGTGCGCCATCCATAT +
Preference number: 4 (lower is better)
Translates to: PEGRLPRVDDKTHPLEHTPAPQH*LVRHPY
Trigger: ATATGGATGGCGCACCAAGCAGTGCTGTGGGGCCGG...CGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp CGGTTTAGGGTCTGGTGTGTGGTACGAGACCCAGGAAGGCAGGACAGGAAGGGGCCGGCCCCACAGCACTaGTTGGTGCGCCATCCATAT +
Preference number: 4 (lower is better)
Translates to: RFRVWCVVRDPGRQDRKGPAPQH*LVRHPY
Trigger: ATATGGATGGCGCACCAAGCAGTGCTGTGGGGCCGG...CCCCTTCCTGTCCTGCCTTCCTGGGTCTCGTACCACACACCAGACCCTAAACCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GAAAATGCCTCACACAAGCACGTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCGAGGAGGATGAGGGCTaGCTCCGCTCCTGGGACCGG +
Preference number: 4 (lower is better)
Translates to: ENASHKHVVSCPVASLETEEDEG*LRSWDR
Trigger: CCGGTCCCAGGAGCGGAGGCAGCCCTCATCCTCCTC...GGTTTCCAAGGAAGCCACAGGGCAGCTGACCACGTGCTTGTGTGAGGCATTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp CGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTCTTGGTCAGGGTGGTGGTACTGGAACACACGCCTaGTGCATGCAGGCGTCTGAG +
Preference number: 4 (lower is better)
Translates to: RLSGHGAASTSGLGQGGGTGTHA*CMQASE
Trigger: CTCAGACGCCTGCATGCAGCAGGCGTGTGTTCCAGT...ACCACCACCCTGACCAAGACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR GCA 90 bp TCCAGGGAGGACAGAGCTTGCCTGAGTGAGCATTCGCTGACACTGGCGGGCTGCACTGGAACACACGCCTaGTGCATGCAGGCGTCTGAG +
Preference number: 4 (lower is better)
Translates to: SREDRACLSEHSLTLAGCTGTHA*CMQASE
Trigger: CTCAGACGCCTGCATGCAGCAGGCGTGTGTTCCAGT...GCAGCCCGCCAGTGTCAGCGAATGCTCACTCAGGCAAGCTCTGTCCTCCCTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGCCCCCGAGGGCCGGCTaGCCCGTGTGGATGATAAAA +
Preference number: 4 (lower is better)
Translates to: AGCPVWMIKLIHWNTRLLPPRAG*PVWMIK
Trigger: TTTTATCATCCACACGGGGCAGCCGGCCCTCGGGGG...CAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp CCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGCATGCAGGCCTGGCGCCAGGACAGTaGTGGGCATCAGGTGCCCGG +
Preference number: 4 (lower is better)
Translates to: PVWMIKLIHWNTRLLHAGLAPGQ*WASGAR
Trigger: CCGGGCACCTGATGCCCAGCACTGTCCTGGCGCCAG...GCCTGCATGCAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp TCCAGGGAGGACAGAGCTTGCCTGAGTGAGCATTCGCTGACACTGGCGGGCTGCCAGACCTCACTTGACTaGCTGCTCCCTGTGTCTGGC +
Preference number: 4 (lower is better)
Translates to: SREDRACLSEHSLTLAGCQTSLD*LLPVSG
Trigger: GCCAGACACAGGGAGCAGGCAGTCAAGTGAGGTCTG...GCAGCCCGCCAGTGTCAGCGAATGCTCACTCAGGCAAGCTCTGTCCTCCCTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCCCTTCCACTCGTGGGAGGAGGCAGACCTCACTTGACTaGCTGCTCCCTGTGTCTGGC +
Preference number: 4 (lower is better)
Translates to: VVSCPVASLETPSTRGRRQTSLD*LLPVSG
Trigger: GCCAGACACAGGGAGCAGGCAGTCAAGTGAGGTCTG...CCTCCTCCCACGAGTGGAAGGGGTTTCCAAGGAAGCCACAGGGCAGCTGACCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CACAGGAGCCTCACCAAGGTGGGCAAGGCCTCCCCCGAGGGCCGGCTGCCCCGTGGAACACCGTCAAGATaGCAAACAGGATATTGTCAA +
Preference number: 4 (lower is better)
Translates to: HRSLTKVGKASPEGRLPRGTPSR*QTGYCQ
Trigger: TTGACAATATCCTGTTTGCCATCTTGACGGTGTTCC...ACGGGGCAGCCGGCCCTCGGGGGAGGCCTTGCCCACCTTGGTGAGGCTCCTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CGGTTTAGGGTCTGGTGTGTGGTACGAGACCCAGGAAGGCAGGACAGGAAGGGGCCCTCTCTCGCTCCTTaGCAAACTCCCCCGAGAGCA +
Preference number: 4 (lower is better)
Translates to: RFRVWCVVRDPGRQDRKGPSLAP*QTPPRA
Trigger: TGCTCTCGGGGGAGTTTGCCAAGGAGCGAGAGAGGG...CCCCTTCCTGTCCTGCCTTCCTGGGTCTCGTACCACACACCAGACCCTAAACCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp AGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGTTTCTGCTCTTCTTGGTaGCCGCTCTCTTCAGCACGT +
Preference number: 4 (lower is better)
Translates to: RSRRTFRWALLLCAARPRFCSSW*PLSSAR
Trigger: ACGTGCTGAAGAGAGCGGCCACCAAGAAGAGCAGAA...ACGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GCTGTGCCGTGCTCGGCCACCCGAGCTGAGTCCCAGGGTGCAGTGGTAACCGTTTCTCCCTCCTCTGCGTaGATCAGGTCATTTCTGCTC +
Preference number: 4 (lower is better)
Translates to: AVPCSATRAESQGAVVTVSPSSA*IRSFLL
Trigger: GAGCAGAAATGACCTGATCCACGCAGAGGAGGGAGA...AACGGTTACCACTGCACCCTGGGACTCAGCTCGGGTGGCCGAGCACGGCACAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp TGGCGCCAGGACAGTGCTGGGCATCAGGTGCCCGGCCTCAGTGGCAGGAGCCGTTGTCGAAGTTGGTTGTaGGAGTCTCATCCTGGAAGT +
Preference number: 4 (lower is better)
Translates to: WRQDSAGHQVPGLSGRSRCRSWL*ESHPGS
Trigger: ACTTCCAGGATGAGACTCCCACAACCAACTTCGACA...ACGGCTCCTGCCACTGAGGCCGGGCACCTGATGCCCAGCACTGTCCTGGCGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CCCCTCCGTCCCGAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCGGAAGGTGTCGAAGTTaGTTGTGGGAGTCTCATCCT +
Preference number: 4 (lower is better)
Translates to: PLRPEVSAHFQVGPASLCGRCRS*LWESHP
Trigger: AGGATGAGACTCCCACAACCAACTTCGACACCTTCC...GCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTCGGGACGGAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp ACGCCTGCTGCATGCAGGCGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTTCTCCCGTCAGGATCTaGAAGACAGTGAGGATGGCG +
Preference number: 4 (lower is better)
Translates to: TPAACRRLSGHGAASTSGSPVRI*KTVRMA
Trigger: CGCCATCCTCACTGTCTTCCAGATCCTGACGGGAGA...ACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACGCCTGCATGCAGCAGGCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp CCACGTGAAGGGTGCTCCCCACAGGACGCAGAGCTCCTCACAACGGCTCCAAGCTCTCCCGTCAGGATCTaGAAGACAGTGAGGATGGCG +
Preference number: 4 (lower is better)
Translates to: PREGCSPQDAELLTTAPSSPVRI*KTVRMA
Trigger: CGCCATCCTCACTGTCTTCCAGATCCTGACGGGAGA...GCTTGGAGCCGTTGTGAGGAGCTCTGCGTCCTGTGGGGAGCACCCTTCACGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp TGGCGCCAGGACAGTGCTGGGCATCAGGTGCCCGGCCTCAGTGGCAGGAGCCGTGAGCAAGCTTCTGATTaGCTGCTTCTTCCATCTCCT +
Preference number: 4 (lower is better)
Translates to: WRQDSAGHQVPGLSGRSREQASD*LLLPSP
Trigger: AGGAGATGGAAGAAGCAGCCAATCAGAAGCTTGCTC...ACGGCTCCTGCCACTGAGGCCGGGCACCTGATGCCCAGCACTGTCCTGGCGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGCCTGGCGGCGATaGAGATGTTCGCGGCAGACA +
Preference number: 4 (lower is better)
Translates to: EGRLPRVDDKTHPLEHTPAAWRR*RCSRQT
Trigger: TGTCTGCCGCGAACATCTCCATCGCCGCCAGGCAGC...AGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp AGACTGAAAATGCCTCACACAAGCACGTGGTCAGCTGCCCTGTGGCTTCCTTGGTCCTTGCTCGGATCCTaGTGCCGGTGCGCGCGGTGG +
Preference number: 4 (lower is better)
Translates to: RLKMPHTSTWSAALWLPWSLLGS*CRCARW
Trigger: CCACCGCGCGCACCGGCACCAGGATCCGAGCAAGGA...CCAAGGAAGCCACAGGGCAGCTGACCACGTGCTTGTGTGAGGCATTTTCAGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGCTCCAGGTCACAGTGTaGCTCCCGGGGCTGGTGGTT +
Preference number: 4 (lower is better)
Translates to: AGCPVWMIKLIHWNTRLLLQVTV*LPGLVV
Trigger: AACCACCAGCCCCGGGAGCCACACTGTGACCTGGAG...CAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GCTGCATGCAGGCGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTCTTGGTTGGGCAGTGTGTGCATaGGACCCACAGTCACAGTCC +
Preference number: 4 (lower is better)
Translates to: AACRRLSGHGAASTSGLGWAVCA*DPQSQS
Trigger: GGACTGTGACTGTGGGTCCCATGCACACACTGCCCA...ACCAAGACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACGCCTGCATGCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp TCCAGGGAGGACAGAGCTTGCCTGAGTGAGCATTCGCTGACACTGGCGGGCTGCTGGGCAGTGTGTGCATaGGACCCACAGTCACAGTCC +
Preference number: 4 (lower is better)
Translates to: SREDRACLSEHSLTLAGCWAVCA*DPQSQS
Trigger: GGACTGTGACTGTGGGTCCCATGCACACACTGCCCA...GCAGCCCGCCAGTGTCAGCGAATGCTCACTCAGGCAAGCTCTGTCCTCCCTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCCCTTCCACTCGTGGGAGGAGGTCTGGAGACAGGTGCTaGGCAGTGTGTGCATGGGAC +
Preference number: 4 (lower is better)
Translates to: VVSCPVASLETPSTRGRRSGDRC*AVCAWD
Trigger: GTCCCATGCACACACTGCCCAGCACCTGTCTCCAGA...CCTCCTCCCACGAGTGGAAGGGGTTTCCAAGGAAGCCACAGGGCAGCTGACCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp TCCAGGGAGGACAGAGCTTGCCTGAGTGAGCATTCGCTGACACTGGCGGGCTGCTCTGGAGACAGGTGCTaGGCAGTGTGTGCATGGGAC +
Preference number: 4 (lower is better)
Translates to: SREDRACLSEHSLTLAGCSGDRC*AVCAWD
Trigger: GTCCCATGCACACACTGCCCAGCACCTGTCTCCAGA...GCAGCCCGCCAGTGTCAGCGAATGCTCACTCAGGCAAGCTCTGTCCTCCCTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp TCCAGGGAGGACAGAGCTTGCCTGAGTGAGCATTCGCTGACACTGGCGGGCTGCAATAGTGTTCGGGTCTaGGGGCTGACTGCCCATGCG +
Preference number: 4 (lower is better)
Translates to: SREDRACLSEHSLTLAGCNSVRV*GLTAHA
Trigger: CGCATGGGCAGTCAGCCCCCAGACCCGAACACTATT...GCAGCCCGCCAGTGTCAGCGAATGCTCACTCAGGCAAGCTCTGTCCTCCCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GCTTGCCTGAGTGAGCATTCGCTGACACTGGCGGGCTGCACAAGCCACGACTGTGGTCCACGTTACCACTaGGAACGACCGTGGCTTCCC +
Preference number: 4 (lower is better)
Translates to: ACLSEHSLTLAGCTSHDCGPRYH*ERPWLP
Trigger: GGGAAGCCACGGTCGTTCCCAGTGGTAACGTGGACC...ACAGTCGTGGCTTGTGCAGCCCGCCAGTGTCAGCGAATGCTCACTCAGGCAAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCCCTTCCACTCGTGGGAGGAGGAGTGTTTCAGCACCATaGGCCAGCCTTCTCCCGTGG +
Preference number: 4 (lower is better)
Translates to: VVSCPVASLETPSTRGRRSVSAP*ASLLPW
Trigger: CCACGGGAGAAGGCTGGCCCATGGTGCTGAAACACT...CCTCCTCCCACGAGTGGAAGGGGTTTCCAAGGAAGCCACAGGGCAGCTGACCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCCCTTCCACTCGTGGGAGGAGGCACACTCGGTGGCATTaGCCTGCTCATCACAGGCCT +
Preference number: 4 (lower is better)
Translates to: VVSCPVASLETPSTRGRRHTRWH*PAHHRP
Trigger: AGGCCTGTGATGAGCAGGCCAATGCCACCGAGTGTG...CCTCCTCCCACGAGTGGAAGGGGTTTCCAAGGAAGCCACAGGGCAGCTGACCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CCACGTGAAGGGTGCTCCCCACAGGACGCAGAGCTCCTCACAACGGCTCCAAGCCACTTCCACACTCGGTaGCATTGGCCTGCTCATCAC +
Preference number: 4 (lower is better)
Translates to: PREGCSPQDAELLTTAPSHFHTR*HWPAHH
Trigger: GTGATGAGCAGGCCAATGCCACCGAGTGTGGAAGTG...GCTTGGAGCCGTTGTGAGGAGCTCTGCGTCCTGTGGGGAGCACCCTTCACGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGCCACCCGAGCTGAGTCCCAGGGTTGTCCTCGTTGGAGATaGGCATGTTCATGCGAACCA +
Preference number: 4 (lower is better)
Translates to: VRVVVAVPCSATRAESQGCPRWR*ACSCEP
Trigger: TGGTTCGCATGAACATGCCCATCTCCAACGAGGACA...ACCCTGGGACTCAGCTCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp GTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCCCTTCCACTCGTGGGAGGAGGCTGCTTTGTCCCAGCTaGGGCCAGCTTGATCTCCAG +
Preference number: 4 (lower is better)
Translates to: VVSCPVASLETPSTRGRRLLCPS*GQLDLQ
Trigger: CTGGAGATCAAGCTGGCCCCAGCTGGGACAAAGCAG...CCTCCTCCCACGAGTGGAAGGGGTTTCCAAGGAAGCCACAGGGCAGCTGACCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp ACCCGAGCTGAGTCCCAGGGTGCAGTGGTAACCGTTGGGCACGCGGCGGAGAGGATCTCATCAGGCTTATaGGGTGGTACCAGCAAGTCC +
Preference number: 4 (lower is better)
Translates to: TRAESQGAVVTVGHAAERISSGL*GGTSKS
Trigger: GGACTTGCTGGTACCACCCCATAAGCCTGATGAGAT...CCTCTCCGCCGCGTGCCCAACGGTTACCACTGCACCCTGGGACTCAGCTCGGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp GCACCAGTGGTCTTGGTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGCCACCCGAGGAGCCTGCTGCATCTaGTCTCTGGTGGTTTTGTTC +
Preference number: 4 (lower is better)
Translates to: APVVLVRVVVAVPCSATRGACCI*SLVVLF
Trigger: GAACAAAACCACCAGAGACCAGATGCAGCAGGCTCC...TCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGACCAAGACCACTGGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp GAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGACACAGGACCCATCTaGGAGAGGCCTCCAGGAGCC +
Preference number: 4 (lower is better)
Translates to: EGRLPRVDDKTHPLEHTPDTGPI*ERPPGA
Trigger: GGCTCCTGGAGGCCTCTCCCAGATGGGTCCTGTGTC...AGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGGACACAGGACCCATCTaGGAGAGGCCTCCAGGAGCC +
Preference number: 4 (lower is better)
Translates to: AGCPVWMIKLIHWNTRLLDTGPI*ERPPGA
Trigger: GGCTCCTGGAGGCCTCTCCCAGATGGGTCCTGTGTC...CAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CCTGCTGCATGCAGGCGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTCTTGTGTCTGCTCCAGGGTaGCCTTCAGAGGGTGGAACA +
Preference number: 4 (lower is better)
Translates to: PAACRRLSGHGAASTSGLVSAPG*PSEGGT
Trigger: TGTTCCACCCTCTGAAGGCCACCCTGGAGCAGACAC...AAGACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACGCCTGCATGCAGCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp GAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGTTGATGCCACTCTCTTaGTTTTGTATGGCCCCGCCA +
Preference number: 4 (lower is better)
Translates to: EVSAHFQVGPASLCRTATLMPLS*FCMAPP
Trigger: TGGCGGGGCCATACAAAACCAAGAGAGTGGCATCAA...CGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGGGTGGCCTGGCCTCATaGGGTGCATCCTGGGTCCTT +
Preference number: 4 (lower is better)
Translates to: AGCPVWMIKLIHWNTRLLGGLAS*GASWVL
Trigger: AAGGACCCAGGATGCACCCCATGAGGCCAGGCCACC...CAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp TCTTCACCAAACAAGGGACCTCCCAGCATCTTGTGCACCTTGGACAGTGTCCTGGAGGCCGCTCGACCCTaGCTCTCCAGCCCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: SSPNKGPPSILCTLDSVLEAARP*LSSPGW
Trigger: CCAGCCTGGGCTGGAGAGCCAGGGTCGAGCGGCCTC...CAGGACACTGTCCAAGGTGCACAAGATGCTGGGAGGTCCCTTGTTTGGTGAAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGTGGGCGGTCCGGGGTaGTGCTGCAAAGATGAGTCC +
Preference number: 4 (lower is better)
Translates to: EGRLPRVDDKTHPLEHTPVGGPG*CCKDES
Trigger: GGACTCATCTTTGCAGCACCACCCCGGACCGCCCAC...AGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp AGACTGAAAATGCCTCACACAAGCACGTGGTCAGCTGCCCTGTGGCTTCCTTGGTGGCAGCGGTGGTGGTaGTGGTGCGACGACGCCTGG +
Preference number: 4 (lower is better)
Translates to: RLKMPHTSTWSAALWLPWWQRWW*WCDDAW
Trigger: CCAGGCGTCGTCGCACCACCACCACCACCGCTGCCA...CCAAGGAAGCCACAGGGCAGCTGACCACGTGCTTGTGTGAGGCATTTTCAGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGTTGGCGACGTTGGGTaGCTGCTGAGGGAGGGCTTG +
Preference number: 4 (lower is better)
Translates to: EGRLPRVDDKTHPLEHTPVGDVG*LLREGL
Trigger: CAAGCCCTCCCTCAGCAGCCACCCAACGTCGCCAAC...AGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CCCGAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGACACGTAGGAAGTCCTaGAGGAGCGGCCCGAGTTGG +
Preference number: 4 (lower is better)
Translates to: PEGRLPRVDDKTHPLEHTTRRKS*RSGPSW
Trigger: CCAACTCGGGCCGCTCCTCCAGGACTTCCTACGTGT...CGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTTGCAGTGGTAACCGTTaGGCACGCGGCGGAGAGGGT +
Preference number: 4 (lower is better)
Translates to: EGRLPRVDDKTHPLEHTPCSGNR*ARGGEG
Trigger: ACCCTCTCCGCCGCGTGCCCAACGGTTACCACTGCA...AGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GAAAATGCCTCACACAAGCACGTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCGGAGCCTCACCAAGGTaGGCAAGGCCTCCCCCGAGG +
Preference number: 4 (lower is better)
Translates to: ENASHKHVVSCPVASLETGASPR*ARPPPR
Trigger: CCTCGGGGGAGGCCTTGCCCACCTTGGTGAGGCTCC...GGTTTCCAAGGAAGCCACAGGGCAGCTGACCACGTGCTTGTGTGAGGCATTTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGCCCCGGCGAAGTGGATaGGTGAGGAGTTGGCCGTCT +
Preference number: 4 (lower is better)
Translates to: AGCPVWMIKLIHWNTRLLPRRSG*VRSWPS
Trigger: AGACGGCCAACTCCTCACCCATCCACTTCGCCGGGG...CAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CTCGTGGGAGGAGGACAGCAAATGGCTGCCTTGTTTGCCACCATGACATCCAGTACGGCTGAGCCGGCCTaGGGAGAAGGCAGGGAGGCT +
Preference number: 4 (lower is better)
Translates to: LVGGGQQMAALFATMTSSTAEPA*GEGREA
Trigger: AGCCTCCCTGCCTTCTCCCCAGGCCGGCTCAGCCGT...ACTGGATGTCATGGTGGCAAACAAGGCAGCCATTTGCTGTCCTCCTCCCACGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GCCCGGCCTCAGTGGCAGGAGCCGTGTCCTCCCTCGGTCACTTGCTCTGAGTTTCCAGGACACGGGATTTaGACTCCTGGGTCCTTCTCA +
Preference number: 4 (lower is better)
Translates to: ARPQWQEPCPPSVTCSEFPGHGI*TPGSFS
Trigger: TGAGAAGGACCCAGGAGTCCAAATCCCGTGTCCTGG...AAACTCAGAGCAAGTGACCGAGGGAGGACACGGCTCCTGCCACTGAGGCCGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCCCTTCCACTCGTGGGAGGAGGGCCCTGTGGCTTCCTTaGAAACCCCTTCCACTCGTG +
Preference number: 4 (lower is better)
Translates to: VVSCPVASLETPSTRGRRALWLP*KPLPLV
Trigger: CACGAGTGGAAGGGGTTTCCAAGGAAGCCACAGGGC...CCTCCTCCCACGAGTGGAAGGGGTTTCCAAGGAAGCCACAGGGCAGCTGACCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CCACGTGAAGGGTGCTCCCCACAGGACGCAGAGCTCCTCACAACGGCTCCAAGCACACCCAAGATAACATaGGCTGGGGGCTGGGGAACA +
Preference number: 4 (lower is better)
Translates to: PREGCSPQDAELLTTAPSTPKIT*AGGWGT
Trigger: TGTTCCCCAGCCCCCAGCCCATGTTATCTTGGGTGT...GCTTGGAGCCGTTGTGAGGAGCTCTGCGTCCTGTGGGGAGCACCCTTCACGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGCAGCCACTGCTTGACTaGTTCCAGATGCAGACAACT +
Preference number: 4 (lower is better)
Translates to: EVSAHFQVGPASLCRTATQPLLD*FQMQTT
Trigger: AGTTGTCTGCATCTGGAACCAGTCAAGCAGTGGCTG...CGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp CCCGAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGTGGCAAGGATCCCTGTaGGGACGACCACGAAGTCCA +
Preference number: 4 (lower is better)
Translates to: PEGRLPRVDDKTHPLEHTWQGSL*GRPRSP
Trigger: TGGACTTCGTGGTCGTCCTCACAGGGATCCTTGCCA...CGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp CCCGAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGACTCCAGGTACCCGTTaGGCTCTCGCTCGATCTGCT +
Preference number: 4 (lower is better)
Translates to: PEGRLPRVDDKTHPLEHTTPGTR*ALARSA
Trigger: AGCAGATCGAGCGAGAGCTCAACGGGTACCTGGAGT...CGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp CGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGCATGCAGGCGTCTGTCTTCCCGCTCTTaGGGCTGGCGCGGGCGAAGG +
Preference number: 4 (lower is better)
Translates to: RVDDKTHPLEHTPAACRRLSSRS*GWRGRR
Trigger: CCTTCGCCCGCGCCAGCCTCAAGAGCGGGAAGACAG...ACGCCTGCATGCAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GCGGTCACGGTGCAGCTAGCACCAGTGGTCTTGGTCAGGGTGGTGGTAGCTGTGCTTCCTCCGGAAGTATaGCGAGCTCTCTGTCTTCCC +
Preference number: 4 (lower is better)
Translates to: AVTVQLAPVVLVRVVVAVLPPEV*RALCLP
Trigger: GGGAAGACAGAGAGCTCGTCATACTTCCGGAGGAAG...CACAGCTACCACCACCCTGACCAAGACCACTGGTGCTAGCTGCACCGTGACCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR TCA 90 bp CGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTCTTGGTCAGGGTGGTGGTCTTCCTCCGGAAGTATaGCGAGCTCTCTGTCTTCCC +
Preference number: 4 (lower is better)
Translates to: RLSGHGAASTSGLGQGGGLPPEV*RALCLP
Trigger: GGGAAGACAGAGAGCTCGTCATACTTCCGGAGGAAG...ACCACCACCCTGACCAAGACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR TCA 90 bp GCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGGGATCTGGAAGACAGTaGGGATGGCGGCAGGGAAGG +
Preference number: 4 (lower is better)
Translates to: AGCPVWMIKLIHWNTRLLGSGRQ*GWRQGR
Trigger: CCTTCCCTGCCGCCATCCTCACTGTCTTCCAGATCC...CAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GCTTGCCTGAGTGAGCATTCGCTGACACTGGCGGGCTGCACAAGCCACGACTGTCGAGTGACGTTCCGCTaGTTGTCTGCATCCTCTGGC +
Preference number: 4 (lower is better)
Translates to: ACLSEHSLTLAGCTSHDCRVTFR*LSASSG
Trigger: GCCAGAGGATGCAGACAATCAGCGGAACGTCACTCG...ACAGTCGTGGCTTGTGCAGCCCGCCAGTGTCAGCGAATGCTCACTCAGGCAAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GGATTCTCGACCCAACACTGCCTGGGGAAATGGCTGTGGTTCTGCATGGAATGGTTCGGGTCTGGGGGCTaGCTGCCCATGCGAGTGACG +
Preference number: 4 (lower is better)
Translates to: GFSTQHCLGKWLWFCMEWFGSGG*LPMRVT
Trigger: CGTCACTCGCATGGGCAGTCAGCCCCCAGACCCGAA...CCATTCCATGCAGAACCACAGCCATTTCCCCAGGCAGTGTTGGGTCGAGAATCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GAAAATGCCTCACACAAGCACGTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCTTCGGGTCTGGGGGCTaGCTGCCCATGCGAGTGACG +
Preference number: 4 (lower is better)
Translates to: ENASHKHVVSCPVASLETFGSGG*LPMRVT
Trigger: CGTCACTCGCATGGGCAGTCAGCCCCCAGACCCGAA...GGTTTCCAAGGAAGCCACAGGGCAGCTGACCACGTGCTTGTGTGAGGCATTTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GCGGTCACGGTGCAGCTAGCACCAGTGGTCTTGGTCAGGGTGGTGGTAGCTGTGACATGTCATTGTAACTaGTGCGCCCACACGCAGCCG +
Preference number: 4 (lower is better)
Translates to: AVTVQLAPVVLVRVVVAVTCHCN*CAHTQP
Trigger: CGGCTGCGTGTGGGCGCATCAGTTACAATGACATGT...CACAGCTACCACCACCCTGACCAAGACCACTGGTGCTAGCTGCACCGTGACCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR TCA 90 bp TCTTCACCAAACAAGGGACCTCCCAGCATCTTGTGCACCTTGGACAGTGTCCTGCCAGTGCCGTCCGGATaGGGGCCATCAGCGTGGACG +
Preference number: 4 (lower is better)
Translates to: SSPNKGPPSILCTLDSVLPVPSG*GPSAWT
Trigger: CGTCCACGCTGATGGCCCTCATCCGGACGGCACTGG...CAGGACACTGTCCAAGGTGCACAAGATGCTGGGAGGTCCCTTGTTTGGTGAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp CCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGCATGCAGGCCAGCTGGGGCCAGCTTaGTCTCCAGTGCCGTCCGGA +
Preference number: 4 (lower is better)
Translates to: PVWMIKLIHWNTRLLHAGQLGPA*SPVPSG
Trigger: TCCGGACGGCACTGGAGATCAAGCTGGCCCCAGCTG...GCCTGCATGCAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp AGACTGAAAATGCCTCACACAAGCACGTGGTCAGCTGCCCTGTGGCTTCCTTGGCAGCTGGGGCCAGCTTaGTCTCCAGTGCCGTCCGGA +
Preference number: 4 (lower is better)
Translates to: RLKMPHTSTWSAALWLPWQLGPA*SPVPSG
Trigger: TCCGGACGGCACTGGAGATCAAGCTGGCCCCAGCTG...CCAAGGAAGCCACAGGGCAGCTGACCACGTGCTTGTGTGAGGCATTTTCAGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GCTGCATGCAGGCGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTCTTGGTAACTCCGCGTCACACTaGTGCTGCTTTGTCCCAGCT +
Preference number: 4 (lower is better)
Translates to: AACRRLSGHGAASTSGLGNSASH*CCFVPA
Trigger: AGCTGGGACAAAGCAGCATCAGTGTGACGCGGAGTT...ACCAAGACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACGCCTGCATGCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR TCA 90 bp CCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGCATGCAGGCCACAGCCAGTGCTCCTaGCCGCCCCACAGGGATCTC +
Preference number: 4 (lower is better)
Translates to: PVWMIKLIHWNTRLLHAGHSQCS*PPHRDL
Trigger: GAGATCCCTGTGGGGCGGTCAGGAGCACTGGCTGTG...GCCTGCATGCAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GCCCGGCCTCAGTGGCAGGAGCCGTGTCCTCCCTCGGTCACTTGCTCTGAGTTTGTTATGCTCTGCATCTaGACGTCCACAGCCAGTGCT +
Preference number: 4 (lower is better)
Translates to: ARPQWQEPCPPSVTCSEFVMLCI*TSTASA
Trigger: AGCACTGGCTGTGGACGTTCAGATGCAGAGCATAAC...AAACTCAGAGCAAGTGACCGAGGGAGGACACGGCTCCTGCCACTGAGGCCGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GAAAATGCCTCACACAAGCACGTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCACGTTGGGTGGCTGCTaGGGGAGGGCTTGGGCTTCG +
Preference number: 4 (lower is better)
Translates to: ENASHKHVVSCPVASLETTLGGC*GRAWAS
Trigger: CGAAGCCCAAGCCCTCCCTCAGCAGCCACCCAACGT...GGTTTCCAAGGAAGCCACAGGGCAGCTGACCACGTGCTTGTGTGAGGCATTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTCAGCCTCCTCGAAAGTaGGAGTGTCCTCAGGCAGGG +
Preference number: 4 (lower is better)
Translates to: EGRLPRVDDKTHPLEHTPQPPRK*ECPQAG
Trigger: CCCTGCCTGAGGACACTCTCACTTTCGAGGAGGCTG...AGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp CGGTTTAGGGTCTGGTGTGTGGTACGAGACCCAGGAAGGCAGGACAGGAAGGGGCAGAGCTTGCCTGAGTaGGCATTCGCTGACACTGGC +
Preference number: 4 (lower is better)
Translates to: RFRVWCVVRDPGRQDRKGQSLPE*AFADTG
Trigger: GCCAGTGTCAGCGAATGCTCACTCAGGCAAGCTCTG...CCCCTTCCTGTCCTGCCTTCCTGGGTCTCGTACCACACACCAGACCCTAAACCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GGATTCTCGACCCAACACTGCCTGGGGAAATGGCTGTGGTTCTGCATGGAATGGCGGTTCCTGTGGGGCTaGCGGTGTCCAGGGAGGACA +
Preference number: 4 (lower is better)
Translates to: GFSTQHCLGKWLWFCMEWRFLWG*RCPGRT
Trigger: TGTCCTCCCTGGACACCGTCAGCCCCACAGGAACCG...CCATTCCATGCAGAACCACAGCCATTTCCCCAGGCAGTGTTGGGTCGAGAATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp TGGCGCCAGGACAGTGCTGGGCATCAGGTGCCCGGCCTCAGTGGCAGGAGCCGTCACGTGGCAAAAAGCTaGCATCTTTCTTTCACAGGT +
Preference number: 4 (lower is better)
Translates to: WRQDSAGHQVPGLSGRSRHVAKS*HLSFTG
Trigger: ACCTGTGAAAGAAAGATGTCAGCTTTTTGCCACGTG...ACGGCTCCTGCCACTGAGGCCGGGCACCTGATGCCCAGCACTGTCCTGGCGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCCCTTCCACTCGTGGGAGGAGGCTCGGTCACTTGCTCTaGGTTTCATTCCAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: VVSCPVASLETPSTRGRRLGHLL*VSFQLG
Trigger: CCCCAGCTGGAATGAAACTCAGAGCAAGTGACCGAG...CCTCCTCCCACGAGTGGAAGGGGTTTCCAAGGAAGCCACAGGGCAGCTGACCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GCCCGGCCTCAGTGGCAGGAGCCGTGTCCTCCCTCGGTCACTTGCTCTGAGTTTAGGCCTTGTGGAACTTaGCCATGTAGAACTCCAGGC +
Preference number: 4 (lower is better)
Translates to: ARPQWQEPCPPSVTCSEFRPCGT*PCRTPG
Trigger: GCCTGGAGTTCTACATGGGCAAGTTCCACAAGGCCT...AAACTCAGAGCAAGTGACCGAGGGAGGACACGGCTCCTGCCACTGAGGCCGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp CCTGCTGCATGCAGGCGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTCTTGCCAGTTCCAGGTGTTaGCGGCCGCATCGTTTGTAT +
Preference number: 4 (lower is better)
Translates to: PAACRRLSGHGAASTSGLASSRC*RPHRLY
Trigger: ATACAAACGATGCGGCCGGCAACACCTGGAACTGGC...AAGACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACGCCTGCATGCAGCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR GCA 90 bp CCCGAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGAGGGGACTTCTCCTCTaGATTCCTGTCCTCCTCGGC +
Preference number: 4 (lower is better)
Translates to: PEGRLPRVDDKTHPLEHTRGLLL*IPVLLG
Trigger: GCCGAGGAGGACAGGAATGCAGAGGAGAAGTCCCCT...CGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GAAAATGCCTCACACAAGCACGTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCGCCTTGGCCGAGTTCTaGTGCCTGGCGGCGATGGAG +
Preference number: 4 (lower is better)
Translates to: ENASHKHVVSCPVASLETALAEF*CLAAME
Trigger: CTCCATCGCCGCCAGGCAGCAGAACTCGGCCAAGGC...GGTTTCCAAGGAAGCCACAGGGCAGCTGACCACGTGCTTGTGTGAGGCATTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp CGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGCATGCAGGCGTCTGGCCCGCAGGTTCTaGAGCCGTAGCTGGCTGGCC +
Preference number: 4 (lower is better)
Translates to: RVDDKTHPLEHTPAACRRLARRF*SRSWLA
Trigger: GGCCAGCCAGCTACGGCTGCAGAACCTGCGGGCCAG...ACGCCTGCATGCAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp CGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGCATGCAGGCGTCGCCGGCGCACTCCTTaGTCGGATCCTGGTGCCGGT +
Preference number: 4 (lower is better)
Translates to: RVDDKTHPLEHTPAACRRRRRTP*SDPGAG
Trigger: ACCGGCACCAGGATCCGAGCAAGGAGTGCGCCGGCG...ACGCCTGCATGCAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GCTTGCCTGAGTGAGCATTCGCTGACACTGGCGGGCTGCACAAGCCACGACTGTGTGCTGGGCAGTGTGTaGATGGGACCCACAGTCACA +
Preference number: 4 (lower is better)
Translates to: ACLSEHSLTLAGCTSHDCVLGSV*MGPTVT
Trigger: TGTGACTGTGGGTCCCATGCACACACTGCCCAGCAC...ACAGTCGTGGCTTGTGCAGCCCGCCAGTGTCAGCGAATGCTCACTCAGGCAAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp ACGCCTGCTGCATGCAGGCGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTGTTCCGCTGATTGTCTaGATCCTCTGGCTGTTCCTC +
Preference number: 4 (lower is better)
Translates to: TPAACRRLSGHGAASTSGVPLIV*ILWLFL
Trigger: GAGGAACAGCCAGAGGATGCAGACAATCAGCGGAAC...ACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACGCCTGCATGCAGCAGGCGT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR GCA 90 bp CCCCTCCGTCCCGAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCTTCCCTTTGAAGAGCTaGACCGCAATGACGGCAAAT +
Preference number: 4 (lower is better)
Translates to: PLRPEVSAHFQVGPASLCFPLKS*TAMTAN
Trigger: ATTTGCCGTCATTGCGGTGCAGCTCTTCAAAGGGAA...GCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTCGGGACGGAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GCTGCATGCAGGCGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTCTTGGTCCAAATACTGACCCCTaGAGTCCCTCTCCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: AACRRLSGHGAASTSGLGPNTDP*SPSPAP
Trigger: AGGAGCTGGAGAGGGACTGCAGGGGTCAGTATTTGG...ACCAAGACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACGCCTGCATGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR GCA 90 bp CCTGCTGCATGCAGGCGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTCTTCCAAATACTGACCCCTaGAGTCCCTCTCCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: PAACRRLSGHGAASTSGLPNTDP*SPSPAP
Trigger: AGGAGCTGGAGAGGGACTGCAGGGGTCAGTATTTGG...AAGACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACGCCTGCATGCAGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR GCA 90 bp CACAGGAGCCTCACCAAGGTGGGCAAGGCCTCCCCCGAGGGCCGGCTGCCCCGTCTCGTACTCATAGGGTaGATCATAGAACTTCATCAT +
Preference number: 4 (lower is better)
Translates to: HRSLTKVGKASPEGRLPRLVLIG*IIELHH
Trigger: ATGATGAAGTTCTATGATGCACCCTATGAGTACGAG...ACGGGGCAGCCGGCCCTCGGGGGAGGCCTTGCCCACCTTGGTGAGGCTCCTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTAGGCCTCCAGGAGCCTaGTGCATCTGGTCTCTGGTG +
Preference number: 4 (lower is better)
Translates to: EGRLPRVDDKTHPLEHTPRPPGA*CIWSLV
Trigger: CACCAGAGACCAGATGCAGCAGGCTCCTGGAGGCCT...AGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GCTAGGCTGTGTGGGTTTAGAAAAGTGGATTCTCGACCCAACACTGCCTGGGGACGGTGGTGGTGGTGGTaGGACGACGCCTGGCTAGGG +
Preference number: 4 (lower is better)
Translates to: ARLCGFRKVDSRPNTAWGRWWWW*DDAWLG
Trigger: CCCTAGCCAGGCGTCGTCGCACCACCACCACCACCG...TCCCCAGGCAGTGTTGGGTCGAGAATCCACTTTTCTAAACCCACACAGCCTAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp AGACTGAAAATGCCTCACACAAGCACGTGGTCAGCTGCCCTGTGGCTTCCTTGGTCTGCTTCCTGTCCCTaGGGCGGTGGCAGCGGTGGT +
Preference number: 4 (lower is better)
Translates to: RLKMPHTSTWSAALWLPWSASCP*GGGSGG
Trigger: ACCACCGCTGCCACCGCCGCAGGGACAGGAAGCAGA...CCAAGGAAGCCACAGGGCAGCTGACCACGTGCTTGTGTGAGGCATTTTCAGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCCCTTCCACTCGTGGGAGGAGGCACAGCACTGCTTGGTaGGCCATCCATATCGGCAGA +
Preference number: 4 (lower is better)
Translates to: VVSCPVASLETPSTRGRRHSTAW*AIHIGR
Trigger: TCTGCCGATATGGATGGCGCACCAAGCAGTGCTGTG...CCTCCTCCCACGAGTGGAAGGGGTTTCCAAGGA