RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CACNA1B (Homo sapiens)

Ensembl gene IDs: ENSG00000148408

Ensembl transcript IDs: ENST00000277549.9, ENST00000277551.6, ENST00000371355.8, ENST00000371357.5, ENST00000371363.5, ENST00000371372.6, ENST00000413253.1

Found 1970 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCATCCCCTCCGTCCCGAGGTCTCGGCGCACTTTCAGGTGGGCCCTaGTTCTCTGTGCCGCACGGCCACGTGAAGGGTGCTCCCCACAGG +
Preference number: 1 (lower is better)
Translates to: PSPPSRGLGALSGGP*FSVPHGHVKGAPHR
Trigger: CCTGTGGGGAGCACCCTTCACGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTCGGGACGGAGGGGATGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR TCA 90 bp CTTGGTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGCCACCCGAGCTaGGTCCCAGGGTGCAGTGGTAACCGTTGGGCACGCGGCGGAGAG +
Preference number: 1 (lower is better)
Translates to: LGQGGGSCAVLGHPS*VPGCSGNRWARGGE
Trigger: CTCTCCGCCGCGTGCCCAACGGTTACCACTGCACCCTGGGACTCAGCTCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGACCAAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
3UTR TCA 90 bp ATCCCGAGGCCTCGCCTCACACCACAGTGCCCAGGAGCCTGGGTGTaGGGGCCTGGCGGTCAGGCACTTGGTCAAGAGCAGCAGAGCCAG +
Preference number: 1 (lower is better)
Translates to: IPRPRLTPQCPGAWV*GPGGQALGQEQQSQ
Trigger: CTGGCTCTGCTGCTCTTGACCAAGTGCCTGACCGCCAGGCCCTCACACCCAGGCTCCTGGGCACTGTGGTGTGAGGCGAGGCCTCGGGAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR TCA 90 bp CCGGCCTCAGTGGCAGGAGCCGTGTCCTCCCTCGGTCACTTGCTCTaGGTTTCATTCCAGCTGGGGCTTCCTCCCTCCTGCCCTGACGGC +
Preference number: 1 (lower is better)
Translates to: PASVAGAVSSLGHLL*VSFQLGLPPSCPDG
Trigger: GCCGTCAGGGCAGGAGGGAGGAAGCCCCAGCTGGAATGAAACTCAGAGCAAGTGACCGAGGGAGGACACGGCTCCTGCCACTGAGGCCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR GCA 90 bp TTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGTGAAGGGTaGTCCCCACAGGACGCAGAGCTCCTCACAACGGCTCCAAGCACC +
Preference number: 1 (lower is better)
Translates to: FRWALLLCAARPREG*SPQDAELLTTAPST
Trigger: GGTGCTTGGAGCCGTTGTGAGGAGCTCTGCGTCCTGTGGGGAGCACCCTTCACGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR GCA 90 bp AGACCTCACTTGACTGCCTGCTCCCTGTGTCTGGCGCCAGGACAGTaGTGGGCATCAGGTGCCCGGCCTCAGTGGCAGGAGCCGTGTCCT +
Preference number: 1 (lower is better)
Translates to: RPHLTACSLCLAPGQ*WASGARPQWQEPCP
Trigger: AGGACACGGCTCCTGCCACTGAGGCCGGGCACCTGATGCCCAGCACTGTCCTGGCGCCAGACACAGGGAGCAGGCAGTCAAGTGAGGTCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR GCA 90 bp CAGCTAGCACCAGTGGTCTTGGTCAGGGTGGTGGTAGCTGTGCCGTaGTCGGCCACCCGAGCTGAGTCCCAGGGTGCAGTGGTAACCGTT +
Preference number: 1 (lower is better)
Translates to: QLAPVVLVRVVVAVP*SATRAESQGAVVTV
Trigger: AACGGTTACCACTGCACCCTGGGACTCAGCTCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGACCAAGACCACTGGTGCTAGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
3UTR GCA 90 bp ACAGGAGCCTCACCAAGGTGGGCAAGGCCTCCCCCGAGGGCCGGCTaGCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTG +
Preference number: 1 (lower is better)
Translates to: TGASPRWARPPPRAG*PVWMIKLIHWNTRL
Trigger: CAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTCGGGGGAGGCCTTGCCCACCTTGGTGAGGCTCCTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR TCA 90 bp TGCTACCTGGCTGCCATCGCGAGTACTTTTCACAGCATCCTGCGGTaGTGGATCCCGAGGCCTCGCCTCACACCACAGTGCCCAGGAGCC +
Preference number: 1 (lower is better)
Translates to: CYLAAIASTFHSILR*WIPRPRLTPQCPGA
Trigger: GGCTCCTGGGCACTGTGGTGTGAGGCGAGGCCTCGGGATCCATCACCGCAGGATGCTGTGAAAAGTACTCGCGATGGCAGCCAGGTAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR GCA 90 bp GGGCTTGCTACCTGGCTGCCATCGCGAGTACTTTTCACAGCATCCTaGGGTGATGGATCCCGAGGCCTCGCCTCACACCACAGTGCCCAG +
Preference number: 1 (lower is better)
Translates to: GLATWLPSRVLFTAS*GDGSRGLASHHSAQ
Trigger: CTGGGCACTGTGGTGTGAGGCGAGGCCTCGGGATCCATCACCGCAGGATGCTGTGAAAAGTACTCGCGATGGCAGCCAGGTAGCAAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR TCA 90 bp GACGCAGAGCTCCTCACAACGGCTCCAAGCACCCATGCTGGATGCTaGGTCCCAGGACACGGGATTTGGACTCCTGGGTCCTTCTCAGCC +
Preference number: 1 (lower is better)
Translates to: DAELLTTAPSTHAGC*VPGHGIWTPGSFSA
Trigger: GGCTGAGAAGGACCCAGGAGTCCAAATCCCGTGTCCTGGGACTCAGCATCCAGCATGGGTGCTTGGAGCCGTTGTGAGGAGCTCTGCGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR CCA 90 bp CCTGGGTCCTTCTCAGCCACACACAGCAGCCTGCGGTTTAGGGTCTaGTGTGTGGTACGAGACCCAGGAAGGCAGGACAGGAAGGGGACA +
Preference number: 1 (lower is better)
Translates to: PGSFSATHSSLRFRV*CVVRDPGRQDRKGT
Trigger: TGTCCCCTTCCTGTCCTGCCTTCCTGGGTCTCGTACCACACACCAGACCCTAAACCGCAGGCTGCTGTGTGTGGCTGAGAAGGACCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR CCA 90 bp CCCACAGGACGCAGAGCTCCTCACAACGGCTCCAAGCACCCATGCTaGATGCTGAGTCCCAGGACACGGGATTTGGACTCCTGGGTCCTT +
Preference number: 1 (lower is better)
Translates to: PTGRRAPHNGSKHPC*MLSPRTRDLDSWVL
Trigger: AAGGACCCAGGAGTCCAAATCCCGTGTCCTGGGACTCAGCATCCAGCATGGGTGCTTGGAGCCGTTGTGAGGAGCTCTGCGTCCTGTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR GCA 90 bp ACGGGATTTGGACTCCTGGGTCCTTCTCAGCCACACACAGCAGCCTaGGGTTTAGGGTCTGGTGTGTGGTACGAGACCCAGGAAGGCAGG +
Preference number: 1 (lower is better)
Translates to: TGFGLLGPSQPHTAA*GLGSGVWYETQEGR
Trigger: CCTGCCTTCCTGGGTCTCGTACCACACACCAGACCCTAAACCGCAGGCTGCTGTGTGTGGCTGAGAAGGACCCAGGAGTCCAAATCCCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR TCA 90 bp CACTCGTGGGAGGAGGACAGCAAATGGCTGCCTTGTTTGCCACCATaGCATCCAGTGCTCTCCACTGGCAAGGGCTTGCTACCTGGCTGC +
Preference number: 1 (lower is better)
Translates to: HSWEEDSKWLPCLPP*HPVLSTGKGLLPGC
Trigger: GCAGCCAGGTAGCAAGCCCTTGCCAGTGGAGAGCACTGGATGTCATGGTGGCAAACAAGGCAGCCATTTGCTGTCCTCCTCCCACGAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR TCA 90 bp ATAAAACTCATCCACTGGAACACACGCCTGCTGCATGCAGGCGTCTaGGCGGTCACGGTGCAGCTAGCACCAGTGGTCTTGGTCAGGGTG +
Preference number: 1 (lower is better)
Translates to: IKLIHWNTRLLHAGV*AVTVQLAPVVLVRV
Trigger: CACCCTGACCAAGACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACGCCTGCATGCAGCAGGCGTGTGTTCCAGTGGATGAGTTTTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
3UTR CCA 90 bp GCCACCATGACATCCAGTGCTCTCCACTGGCAAGGGCTTGCTACCTaGCTGCCATCGCGAGTACTTTTCACAGCATCCTGCGGTGATGGA +
Preference number: 1 (lower is better)
Translates to: ATMTSSALHWQGLAT*LPSRVLFTASCGDG
Trigger: TCCATCACCGCAGGATGCTGTGAAAAGTACTCGCGATGGCAGCCAGGTAGCAAGCCCTTGCCAGTGGAGAGCACTGGATGTCATGGTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR GCA 90 bp CGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGCATaGAGGCGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTCTT +
Preference number: 1 (lower is better)
Translates to: RVDDKTHPLEHTPAA*RRLSGHGAASTSGL
Trigger: AAGACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACGCCTGCATGCAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
3UTR GCA 90 bp TATGCAGAACAGACTGAAAATGCCTCACACAAGCACGTGGTCAGCTaGCCTGTGGCTTCCTTGGAAACCCCTTCCACTCGTGGGAGGAGG +
Preference number: 1 (lower is better)
Translates to: YAEQTENASHKHVVS*PVASLETPSTRGRR
Trigger: CCTCCTCCCACGAGTGGAAGGGGTTTCCAAGGAAGCCACAGGGCAGCTGACCACGTGCTTGTGTGAGGCATTTTCAGTCTGTTCTGCATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR CCA 90 bp AACAGACTGAAAATGCCTCACACAAGCACGTGGTCAGCTGCCCTGTaGCTTCCTTGGAAACCCCTTCCACTCGTGGGAGGAGGACAGCAA +
Preference number: 1 (lower is better)
Translates to: NRLKMPHTSTWSAAL*LPWKPLPLVGGGQQ
Trigger: TTGCTGTCCTCCTCCCACGAGTGGAAGGGGTTTCCAAGGAAGCCACAGGGCAGCTGACCACGTGCTTGTGTGAGGCATTTTCAGTCTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR GCA 90 bp AGTGGATTCTCGACCCAACACTGCCTGGGGAAATGGCTGTGGTTCTaGATGGAATGGACACATTCGACACCCAAGATAACATGGGCTGGG +
Preference number: 1 (lower is better)
Translates to: SGFSTQHCLGKWLWF*MEWTHSTPKITWAG
Trigger: CCCAGCCCATGTTATCTTGGGTGTCGAATGTGTCCATTCCATGCAGAACCACAGCCATTTCCCCAGGCAGTGTTGGGTCGAGAATCCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR CCA 90 bp GAGAATCATATGCAGAACAGACTGAAAATGCCTCACACAAGCACGTaGTCAGCTGCCCTGTGGCTTCCTTGGAAACCCCTTCCACTCGTG +
Preference number: 1 (lower is better)
Translates to: ENHMQNRLKMPHTST*SAALWLPWKPLPLV
Trigger: CACGAGTGGAAGGGGTTTCCAAGGAAGCCACAGGGCAGCTGACCACGTGCTTGTGTGAGGCATTTTCAGTCTGTTCTGCATATGATTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR TCA 90 bp TCACATACCACAGAGTGTGCCCTGAGAATCATATGCAGAACAGACTaGAAATGCCTCACACAAGCACGTGGTCAGCTGCCCTGTGGCTTC +
Preference number: 1 (lower is better)
Translates to: SHTTECALRIICRTD*KCLTQARGQLPCGF
Trigger: GAAGCCACAGGGCAGCTGACCACGTGCTTGTGTGAGGCATTTTCAGTCTGTTCTGCATATGATTCTCAGGGCACACTCTGTGGTATGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR CCA 90 bp AGGCTGTGTGGGTTTAGAAAAGTGGATTCTCGACCCAACACTGCCTaGGGAAATGGCTGTGGTTCTGCATGGAATGGACACATTCGACAC +
Preference number: 1 (lower is better)
Translates to: RLCGFRKVDSRPNTA*GNGCGSAWNGHIRH
Trigger: GTGTCGAATGTGTCCATTCCATGCAGAACCACAGCCATTTCCCCAGGCAGTGTTGGGTCGAGAATCCACTTTTCTAAACCCACACAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR GCA 90 bp GGAATTTCAGAACACGGAGGACACACCACCATCAACTGCTCTAAATaGTCCCTTTCTTCACCAAACAAGGGACCTCCCAGCATCTTGTGC +
Preference number: 1 (lower is better)
Translates to: GISEHGGHTTINCSK*SLSSPNKGPPSILC
Trigger: GCACAAGATGCTGGGAGGTCCCTTGTTTGGTGAAGAAAGGGAGCATTTAGAGCAGTTGATGGTGGTGTGTCCTCCGTGTTCTGAAATTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR GCA 90 bp AGATCATCTGGAATTTCAGAACACGGAGGACACACCACCATCAACTaGTCTAAATGCTCCCTTTCTTCACCAAACAAGGGACCTCCCAGC +
Preference number: 1 (lower is better)
Translates to: RSSGISEHGGHTTIN*SKCSLSSPNKGPPS
Trigger: GCTGGGAGGTCCCTTGTTTGGTGAAGAAAGGGAGCATTTAGAGCAGTTGATGGTGGTGTGTCCTCCGTGTTCTGAAATTCCAGATGATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR CCA 90 bp TGTCTTCCTCCTTCCTACCAGCCTTTGCCTCTCTTCTGCTGTATGTaGAAGGAAACCTATTTCACATACCACAGAGTGTGCCCTGAGAAT +
Preference number: 1 (lower is better)
Translates to: CLPPSYQPLPLFCCM*KETYFTYHRVCPEN
Trigger: ATTCTCAGGGCACACTCTGTGGTATGTGAAATAGGTTTCCTTCCACATACAGCAGAAGAGAGGCAAAGGCTGGTAGGAAGGAGGAAGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR TCA 90 bp CTGTATGTGGAAGGAAACCTATTTCACATACCACAGAGTGTGCCCTaGGAATCATATGCAGAACAGACTGAAAATGCCTCACACAAGCAC +
Preference number: 1 (lower is better)
Translates to: LYVEGNLFHIPQSVP*ESYAEQTENASHKH
Trigger: GTGCTTGTGTGAGGCATTTTCAGTCTGTTCTGCATATGATTCTCAGGGCACACTCTGTGGTATGTGAAATAGGTTTCCTTCCACATACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR GCA 90 bp AACAAGAGACAAAACGTCAGTGTCAAAATACACATCCTTCTACTTTaGAACAGGAGCACAGTGATCACATGCACAGTCCGAGATTCCTGG +
Preference number: 1 (lower is better)
Translates to: NKRQNVSVKIHILLL*NRSTVITCTVRDSW
Trigger: CCAGGAATCTCGGACTGTGCATGTGATCACTGTGCTCCTGTTGCAAAGTAGAAGGATGTGTATTTTGACACTGACGTTTTGTCTCTTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR TCA 90 bp ACACACACACACACACACACACACACACATCACACACAATTTCTTTaGGGAGAATCATGGGGTAGAAGCCAAGAATCCAACACAGATCAT +
Preference number: 1 (lower is better)
Translates to: THTHTHTHTHHTQFL*GESWGRSQESNTDH
Trigger: ATGATCTGTGTTGGATTCTTGGCTTCTACCCCATGATTCTCCTCAAAGAAATTGTGTGTGATGTGTGTGTGTGTGTGTGTGTGTGTGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR GCA 90 bp GTATATATGTTACATGCACACATAACTTGTTCAAACTACAGCCACTaGTTGACTGGTTCCAGATGCAGACAACTGGGTGATGCACTTCAA +
Preference number: 1 (lower is better)
Translates to: VYMLHAHITCSNYSH*LTGSRCRQLGDALQ
Trigger: TTGAAGTGCATCACCCAGTTGTCTGCATCTGGAACCAGTCAAGCAGTGGCTGTAGTTTGAACAAGTTATGTGTGCATGTAACATATATAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR TCA 90 bp TCAGTGTCAAAATACACATCCTTCTACTTTGCAACAGGAGCACAGTaGTCACATGCACAGTCCGAGATTCCTGGTTTATTCTATTGGAAT +
Preference number: 1 (lower is better)
Translates to: SVSKYTSFYFATGAQ*SHAQSEIPGLFYWN
Trigger: ATTCCAATAGAATAAACCAGGAATCTCGGACTGTGCATGTGATCACTGTGCTCCTGTTGCAAAGTAGAAGGATGTGTATTTTGACACTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR GCA 90 bp CACAGGAGCCTCACCAAGGTGGGCAAGGCCTCCCCCGAGGGCCGGCTGCCCCGTACTGGAACACACGCCTaGTGCATGCAGGCGTCTGAG +
Preference number: 2 (lower is better)
Translates to: HRSLTKVGKASPEGRLPRTGTHA*CMQASE
Trigger: CTCAGACGCCTGCATGCAGCAGGCGTGTGTTCCAGT...ACGGGGCAGCCGGCCCTCGGGGGAGGCCTTGCCCACCTTGGTGAGGCTCCTGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR GCA 90 bp CCCCTCCGTCCCGAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCCCCCGAGGGCCGGCTaGCCCGTGTGGATGATAAAA +
Preference number: 2 (lower is better)
Translates to: PLRPEVSAHFQVGPASLCPPRAG*PVWMIK
Trigger: TTTTATCATCCACACGGGGCAGCCGGCCCTCGGGGG...GCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTCGGGACGGAGGGG
67% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR GCA 90 bp TGGCGCCAGGACAGTGCTGGGCATCAGGTGCCCGGCCTCAGTGGCAGGAGCCGTCTGACACTGGCGGGCTaGACAAGCCACGACTGTGTC +
Preference number: 2 (lower is better)
Translates to: WRQDSAGHQVPGLSGRSRLTLAG*TSHDCV
Trigger: GACACAGTCGTGGCTTGTGCAGCCCGCCAGTGTCAG...ACGGCTCCTGCCACTGAGGCCGGGCACCTGATGCCCAGCACTGTCCTGGCGCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR GCA 90 bp GCCCGGCCTCAGTGGCAGGAGCCGTGTCCTCCCTCGGTCACTTGCTCTGAGTTTCGGCCACGTGAAGGGTaGTCCCCACAGGACGCAGAG +
Preference number: 2 (lower is better)
Translates to: ARPQWQEPCPPSVTCSEFRPREG*SPQDAE
Trigger: CTCTGCGTCCTGTGGGGAGCACCCTTCACGTGGCCG...AAACTCAGAGCAAGTGACCGAGGGAGGACACGGCTCCTGCCACTGAGGCCGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR CCA 90 bp TTGGTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGCCACCCGAGCTGAGTCCCAGTGCAGTGGTAACCGTTaGGCACGCGGCGGAGAGGGT +
Preference number: 2 (lower is better)
Translates to: LVRVVVAVPCSATRAESQCSGNR*ARGGEG
Trigger: ACCCTCTCCGCCGCGTGCCCAACGGTTACCACTGCA...CTGGGACTCAGCTCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGACCAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
3UTR-3UTR TCA 90 bp GTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCCCTTCCACTCGTGGGAGGAGGCACAGCATCCTGCGGTaGTGGATCCCGAGGCCTCGC +
Preference number: 2 (lower is better)
Translates to: VVSCPVASLETPSTRGRRHSILR*WIPRPR
Trigger: GCGAGGCCTCGGGATCCATCACCGCAGGATGCTGTG...CCTCCTCCCACGAGTGGAAGGGGTTTCCAAGGAAGCCACAGGGCAGCTGACCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR GCA 90 bp TGGCGCCAGGACAGTGCTGGGCATCAGGTGCCCGGCCTCAGTGGCAGGAGCCGTCACCATGACATCCAGTaGTCTCCACTGGCAAGGGCT +
Preference number: 2 (lower is better)
Translates to: WRQDSAGHQVPGLSGRSRHHDIQ*SPLARA
Trigger: AGCCCTTGCCAGTGGAGAGCACTGGATGTCATGGTG...ACGGCTCCTGCCACTGAGGCCGGGCACCTGATGCCCAGCACTGTCCTGGCGCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR CCA 90 bp TGGCGCCAGGACAGTGCTGGGCATCAGGTGCCCGGCCTCAGTGGCAGGAGCCGTTTAGGGTCTGGTGTGTaGTACGAGACCCAGGAAGGC +
Preference number: 2 (lower is better)
Translates to: WRQDSAGHQVPGLSGRSRLGSGV*YETQEG
Trigger: GCCTTCCTGGGTCTCGTACCACACACCAGACCCTAA...ACGGCTCCTGCCACTGAGGCCGGGCACCTGATGCCCAGCACTGTCCTGGCGCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR GCA 90 bp GCTTGCCTGAGTGAGCATTCGCTGACACTGGCGGGCTGCACAAGCCACGACTGTCGGCCACGTGAAGGGTaGTCCCCACAGGACGCAGAG +
Preference number: 2 (lower is better)
Translates to: ACLSEHSLTLAGCTSHDCRPREG*SPQDAE
Trigger: CTCTGCGTCCTGTGGGGAGCACCCTTCACGTGGCCG...ACAGTCGTGGCTTGTGCAGCCCGCCAGTGTCAGCGAATGCTCACTCAGGCAAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR CCA 90 bp GTGCAGCTAGCACCAGTGGTCTTGGTCAGGGTGGTGGTAGCTGTGCCGTGCTCGTGCAGTGGTAACCGTTaGGCACGCGGCGGAGAGGGT +
Preference number: 2 (lower is better)
Translates to: VQLAPVVLVRVVVAVPCSCSGNR*ARGGEG
Trigger: ACCCTCTCCGCCGCGTGCCCAACGGTTACCACTGCA...CGAGCACGGCACAGCTACCACCACCCTGACCAAGACCACTGGTGCTAGCTGCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
3UTR-3UTR CCA 90 bp CCCCTCCGTCCCGAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGGGATTTGGACTCCTaGGTCCTTCTCAGCCACACA +
Preference number: 2 (lower is better)
Translates to: PLRPEVSAHFQVGPASLCRDLDS*VLLSHT
Trigger: TGTGTGGCTGAGAAGGACCCAGGAGTCCAAATCCCG...GCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTCGGGACGGAGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR CCA 90 bp CCCCTCCGTCCCGAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCTCCAAGCACCCATGCTaGATGCTGAGTCCCAGGACA +
Preference number: 2 (lower is better)
Translates to: PLRPEVSAHFQVGPASLCSKHPC*MLSPRT
Trigger: TGTCCTGGGACTCAGCATCCAGCATGGGTGCTTGGA...GCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTCGGGACGGAGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR TCA 90 bp CCACGTGAAGGGTGCTCCCCACAGGACGCAGAGCTCCTCACAACGGCTCCAAGCACCCATGCTGGATGCTaGGTCCCAGGACACGGGATT +
Preference number: 2 (lower is better)
Translates to: PREGCSPQDAELLTTAPSTHAGC*VPGHGI
Trigger: AATCCCGTGTCCTGGGACTCAGCATCCAGCATGGGT...GCTTGGAGCCGTTGTGAGGAGCTCTGCGTCCTGTGGGGAGCACCCTTCACGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR TCA 90 bp CTCGTGGGAGGAGGACAGCAAATGGCTGCCTTGTTTGCCACCATGACATCCAGTCCAGGAGCCTGGGTGTaGGGGCCTGGCGGTCAGGCA +
Preference number: 2 (lower is better)
Translates to: LVGGGQQMAALFATMTSSPGAWV*GPGGQA
Trigger: TGCCTGACCGCCAGGCCCTCACACCCAGGCTCCTGG...ACTGGATGTCATGGTGGCAAACAAGGCAGCCATTTGCTGTCCTCCTCCCACGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR GCA 90 bp GCTTGCCTGAGTGAGCATTCGCTGACACTGGCGGGCTGCACAAGCCACGACTGTCCCCCGAGGGCCGGCTaGCCCGTGTGGATGATAAAA +
Preference number: 2 (lower is better)
Translates to: ACLSEHSLTLAGCTSHDCPPRAG*PVWMIK
Trigger: TTTTATCATCCACACGGGGCAGCCGGCCCTCGGGGG...ACAGTCGTGGCTTGTGCAGCCCGCCAGTGTCAGCGAATGCTCACTCAGGCAAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR CCA 90 bp GCCCGGCCTCAGTGGCAGGAGCCGTGTCCTCCCTCGGTCACTTGCTCTGAGTTTGCCCTGTGGCTTCCTTaGAAACCCCTTCCACTCGTG +
Preference number: 2 (lower is better)
Translates to: ARPQWQEPCPPSVTCSEFALWLP*KPLPLV
Trigger: CACGAGTGGAAGGGGTTTCCAAGGAAGCCACAGGGC...AAACTCAGAGCAAGTGACCGAGGGAGGACACGGCTCCTGCCACTGAGGCCGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR CAA 90 bp GGCTCCAAGCACCCATGCTGGATGCTGAGTCCCAGGACACGGGATTaGGACTCCTGGGTCCTTCTCAGCCACACACAGCAGCCTGCGGTT +
Preference number: 2 (lower is better)
Translates to: GSKHPCWMLSPRTRD*DSWVLLSHTQQPAV
Trigger: AACCGCAGGCTGCTGTGTGTGGCTGAGAAGGACCCAGGAGTCCAAATCCCGTGTCCTGGGACTCAGCATCCAGCATGGGTGCTTGGAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR TCA 90 bp GTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCCCTTCCACTCGTGGGAGGAGGCAGAGCTTGCCTGAGTaGGCATTCGCTGACACTGGC +
Preference number: 2 (lower is better)
Translates to: VVSCPVASLETPSTRGRRQSLPE*AFADTG
Trigger: GCCAGTGTCAGCGAATGCTCACTCAGGCAAGCTCTG...CCTCCTCCCACGAGTGGAAGGGGTTTCCAAGGAAGCCACAGGGCAGCTGACCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR TCA 90 bp CGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGCATGCAGGCGTCTCGGCCACCCGAGCTaGGTCCCAGGGTGCAGTGGT +
Preference number: 2 (lower is better)
Translates to: RVDDKTHPLEHTPAACRRLGHPS*VPGCSG
Trigger: ACCACTGCACCCTGGGACTCAGCTCGGGTGGCCGAG...ACGCCTGCATGCAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
3UTR-3UTR TCA 90 bp GCTAGGCTGTGTGGGTTTAGAAAAGTGGATTCTCGACCCAACACTGCCTGGGGATGCCGCACGGCCACGTaGAGGGTGCTCCCCACAGGA +
Preference number: 2 (lower is better)
Translates to: ARLCGFRKVDSRPNTAWGCRTAT*RVLPTG
Trigger: TCCTGTGGGGAGCACCCTTCACGTGGCCGTGCGGCA...TCCCCAGGCAGTGTTGGGTCGAGAATCCACTTTTCTAAACCCACACAGCCTAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR TCA 90 bp GAAAATGCCTCACACAAGCACGTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCCGGTTCCTGTGGGGCTaGCGGTGTCCAGGGAGGACA +
Preference number: 2 (lower is better)
Translates to: ENASHKHVVSCPVASLETRFLWG*RCPGRT
Trigger: TGTCCTCCCTGGACACCGTCAGCCCCACAGGAACCG...GGTTTCCAAGGAAGCCACAGGGCAGCTGACCACGTGCTTGTGTGAGGCATTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR GCA 90 bp GTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCCCTTCCACTCGTGGGAGGAGGCACCATGACATCCAGTaGTCTCCACTGGCAAGGGCT +
Preference number: 2 (lower is better)
Translates to: VVSCPVASLETPSTRGRRHHDIQ*SPLARA
Trigger: AGCCCTTGCCAGTGGAGAGCACTGGATGTCATGGTG...CCTCCTCCCACGAGTGGAAGGGGTTTCCAAGGAAGCCACAGGGCAGCTGACCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR GCA 90 bp GCTAGGCTGTGTGGGTTTAGAAAAGTGGATTCTCGACCCAACACTGCCTGGGGACTGGCGCCAGGACAGTaGTGGGCATCAGGTGCCCGG +
Preference number: 2 (lower is better)
Translates to: ARLCGFRKVDSRPNTAWGLAPGQ*WASGAR
Trigger: CCGGGCACCTGATGCCCAGCACTGTCCTGGCGCCAG...TCCCCAGGCAGTGTTGGGTCGAGAATCCACTTTTCTAAACCCACACAGCCTAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR CCA 90 bp TCTTCACCAAACAAGGGACCTCCCAGCATCTTGTGCACCTTGGACAGTGTCCTGGGAGCCTCACCAAGGTaGGCAAGGCCTCCCCCGAGG +
Preference number: 2 (lower is better)
Translates to: SSPNKGPPSILCTLDSVLGASPR*ARPPPR
Trigger: CCTCGGGGGAGGCCTTGCCCACCTTGGTGAGGCTCC...CAGGACACTGTCCAAGGTGCACAAGATGCTGGGAGGTCCCTTGTTTGGTGAAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR CCA 90 bp TCCAGGGAGGACAGAGCTTGCCTGAGTGAGCATTCGCTGACACTGGCGGGCTGCCGGGATTTGGACTCCTaGGTCCTTCTCAGCCACACA +
Preference number: 2 (lower is better)
Translates to: SREDRACLSEHSLTLAGCRDLDS*VLLSHT
Trigger: TGTGTGGCTGAGAAGGACCCAGGAGTCCAAATCCCG...GCAGCCCGCCAGTGTCAGCGAATGCTCACTCAGGCAAGCTCTGTCCTCCCTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR GCA 90 bp GGATTCTCGACCCAACACTGCCTGGGGAAATGGCTGTGGTTCTGCATGGAATGGCACACGCCTGCTGCATaGAGGCGTCTGAGCGGTCAC +
Preference number: 2 (lower is better)
Translates to: GFSTQHCLGKWLWFCMEWHTPAA*RRLSGH
Trigger: GTGACCGCTCAGACGCCTGCATGCAGCAGGCGTGTG...CCATTCCATGCAGAACCACAGCCATTTCCCCAGGCAGTGTTGGGTCGAGAATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR GCA 90 bp GAAAATGCCTCACACAAGCACGTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCCACACGCCTGCTGCATaGAGGCGTCTGAGCGGTCAC +
Preference number: 2 (lower is better)
Translates to: ENASHKHVVSCPVASLETHTPAA*RRLSGH
Trigger: GTGACCGCTCAGACGCCTGCATGCAGCAGGCGTGTG...GGTTTCCAAGGAAGCCACAGGGCAGCTGACCACGTGCTTGTGTGAGGCATTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR GCA 90 bp CTCGTGGGAGGAGGACAGCAAATGGCTGCCTTGTTTGCCACCATGACATCCAGTCTTTCAGGTGGGCCCTaGTTCTCTGTGCCGCACGGC +
Preference number: 2 (lower is better)
Translates to: LVGGGQQMAALFATMTSSLSGGP*FSVPHG
Trigger: GCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAG...ACTGGATGTCATGGTGGCAAACAAGGCAGCCATTTGCTGTCCTCCTCCCACGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR CCA 90 bp GCTTGCCTGAGTGAGCATTCGCTGACACTGGCGGGCTGCACAAGCCACGACTGTCTGCGGTTTAGGGTCTaGTGTGTGGTACGAGACCCA +
Preference number: 2 (lower is better)
Translates to: ACLSEHSLTLAGCTSHDCLRFRV*CVVRDP
Trigger: TGGGTCTCGTACCACACACCAGACCCTAAACCGCAG...ACAGTCGTGGCTTGTGCAGCCCGCCAGTGTCAGCGAATGCTCACTCAGGCAAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR CCA 90 bp AGACTGAAAATGCCTCACACAAGCACGTGGTCAGCTGCCCTGTGGCTTCCTTGGCGGCGCACTTTCAGGTaGGCCCTGCTTCTCTGTGCC +
Preference number: 2 (lower is better)
Translates to: RLKMPHTSTWSAALWLPWRRTFR*ALLLCA
Trigger: GGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCG...CCAAGGAAGCCACAGGGCAGCTGACCACGTGCTTGTGTGAGGCATTTTCAGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR CCA 90 bp GGATTCTCGACCCAACACTGCCTGGGGAAATGGCTGTGGTTCTGCATGGAATGGCGGCGCACTTTCAGGTaGGCCCTGCTTCTCTGTGCC +
Preference number: 2 (lower is better)
Translates to: GFSTQHCLGKWLWFCMEWRRTFR*ALLLCA
Trigger: GGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCG...CCATTCCATGCAGAACCACAGCCATTTCCCCAGGCAGTGTTGGGTCGAGAATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR CCA 90 bp GGATTCTCGACCCAACACTGCCTGGGGAAATGGCTGTGGTTCTGCATGGAATGGCTGGGTGTGAGGGCCTaGCGGTCAGGCACTTGGTCA +
Preference number: 2 (lower is better)
Translates to: GFSTQHCLGKWLWFCMEWLGVRA*RSGTWS
Trigger: TGACCAAGTGCCTGACCGCCAGGCCCTCACACCCAG...CCATTCCATGCAGAACCACAGCCATTTCCCCAGGCAGTGTTGGGTCGAGAATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR CCA 90 bp GCTAGGCTGTGTGGGTTTAGAAAAGTGGATTCTCGACCCAACACTGCCTGGGGACCTGCTCCCTGTGTCTaGCGCCAGGACAGTGCTGGG +
Preference number: 2 (lower is better)
Translates to: ARLCGFRKVDSRPNTAWGPAPCV*RQDSAG
Trigger: CCCAGCACTGTCCTGGCGCCAGACACAGGGAGCAGG...TCCCCAGGCAGTGTTGGGTCGAGAATCCACTTTTCTAAACCCACACAGCCTAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR GCA 90 bp GCTAGGCTGTGTGGGTTTAGAAAAGTGGATTCTCGACCCAACACTGCCTGGGGACACACGCCTGCTGCATaGAGGCGTCTGAGCGGTCAC +
Preference number: 2 (lower is better)
Translates to: ARLCGFRKVDSRPNTAWGHTPAA*RRLSGH
Trigger: GTGACCGCTCAGACGCCTGCATGCAGCAGGCGTGTG...TCCCCAGGCAGTGTTGGGTCGAGAATCCACTTTTCTAAACCCACACAGCCTAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR GCA 90 bp CTCGTGGGAGGAGGACAGCAAATGGCTGCCTTGTTTGCCACCATGACATCCAGTCTGACACTGGCGGGCTaGACAAGCCACGACTGTGTC +
Preference number: 2 (lower is better)
Translates to: LVGGGQQMAALFATMTSSLTLAG*TSHDCV
Trigger: GACACAGTCGTGGCTTGTGCAGCCCGCCAGTGTCAG...ACTGGATGTCATGGTGGCAAACAAGGCAGCCATTTGCTGTCCTCCTCCCACGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR CCA 90 bp TCTTCACCAAACAAGGGACCTCCCAGCATCTTGTGCACCTTGGACAGTGTCCTGCCGTCTACGTCCACCTaGACCGGACAGGGCTGCACA +
Preference number: 2 (lower is better)
Translates to: SSPNKGPPSILCTLDSVLPSTST*TGQGCT
Trigger: TGTGCAGCCCTGTCCGGTCCAGGTGGACGTAGACGG...CAGGACACTGTCCAAGGTGCACAAGATGCTGGGAGGTCCCTTGTTTGGTGAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR CCA 90 bp TGGCGCCAGGACAGTGCTGGGCATCAGGTGCCCGGCCTCAGTGGCAGGAGCCGTCTCTTCTGCTGTATGTaGAAGGAAACCTATTTCACA +
Preference number: 2 (lower is better)
Translates to: WRQDSAGHQVPGLSGRSRLFCCM*KETYFT
Trigger: TGTGAAATAGGTTTCCTTCCACATACAGCAGAAGAG...ACGGCTCCTGCCACTGAGGCCGGGCACCTGATGCCCAGCACTGTCCTGGCGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR GCA 90 bp AGACTGAAAATGCCTCACACAAGCACGTGGTCAGCTGCCCTGTGGCTTCCTTGGACTGGAACACACGCCTaGTGCATGCAGGCGTCTGAG +
Preference number: 2 (lower is better)
Translates to: RLKMPHTSTWSAALWLPWTGTHA*CMQASE
Trigger: CTCAGACGCCTGCATGCAGCAGGCGTGTGTTCCAGT...CCAAGGAAGCCACAGGGCAGCTGACCACGTGCTTGTGTGAGGCATTTTCAGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR GCA 90 bp GCCCGGCCTCAGTGGCAGGAGCCGTGTCCTCCCTCGGTCACTTGCTCTGAGTTTACATACCACAGAGTGTaGCCTGAGAATCATATGCAG +
Preference number: 2 (lower is better)
Translates to: ARPQWQEPCPPSVTCSEFTYHRV*PENHMQ
Trigger: CTGCATATGATTCTCAGGGCACACTCTGTGGTATGT...AAACTCAGAGCAAGTGACCGAGGGAGGACACGGCTCCTGCCACTGAGGCCGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR CCA 90 bp GAAAATGCCTCACACAAGCACGTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCTGGCGGTCAGGCACTTaGTCAAGAGCAGCAGAGCCA +
Preference number: 2 (lower is better)
Translates to: ENASHKHVVSCPVASLETWRSGT*SRAAEP
Trigger: TGGCTCTGCTGCTCTTGACCAAGTGCCTGACCGCCA...GGTTTCCAAGGAAGCCACAGGGCAGCTGACCACGTGCTTGTGTGAGGCATTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR TCA 90 bp TCTTCACCAAACAAGGGACCTCCCAGCATCTTGTGCACCTTGGACAGTGTCCTGACCCATGCTGGATGCTaGGTCCCAGGACACGGGATT +
Preference number: 2 (lower is better)
Translates to: SSPNKGPPSILCTLDSVLTHAGC*VPGHGI
Trigger: AATCCCGTGTCCTGGGACTCAGCATCCAGCATGGGT...CAGGACACTGTCCAAGGTGCACAAGATGCTGGGAGGTCCCTTGTTTGGTGAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR TCA 90 bp TCATGGGGTAGAAGCCAAGAATCCAACACAGATCATCTGGAATTTCAGAACACGCCAGGAGCCTGGGTGTaGGGGCCTGGCGGTCAGGCA +
Preference number: 2 (lower is better)
Translates to: SWGRSQESNTDHLEFQNTPGAWV*GPGGQA
Trigger: TGCCTGACCGCCAGGCCCTCACACCCAGGCTCCTGG...CGTGTTCTGAAATTCCAGATGATCTGTGTTGGATTCTTGGCTTCTACCCCATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR TCA 90 bp GGGGTAGAAGCCAAGAATCCAACACAGATCATCTGGAATTTCAGAACACGGAGGCACAGCATCCTGCGGTaGTGGATCCCGAGGCCTCGC +
Preference number: 2 (lower is better)
Translates to: GVEAKNPTQIIWNFRTRRHSILR*WIPRPR
Trigger: GCGAGGCCTCGGGATCCATCACCGCAGGATGCTGTG...CCTCCGTGTTCTGAAATTCCAGATGATCTGTGTTGGATTCTTGGCTTCTACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR GCA 90 bp GGATTCTCGACCCAACACTGCCTGGGGAAATGGCTGTGGTTCTGCATGGAATGGAAGCACGTGGTCAGCTaGCCTGTGGCTTCCTTGGAA +
Preference number: 2 (lower is better)
Translates to: GFSTQHCLGKWLWFCMEWKHVVS*PVASLE
Trigger: TTCCAAGGAAGCCACAGGGCAGCTGACCACGTGCTT...CCATTCCATGCAGAACCACAGCCATTTCCCCAGGCAGTGTTGGGTCGAGAATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR GCA 90 bp GGATTCTCGACCCAACACTGCCTGGGGAAATGGCTGTGGTTCTGCATGGAATGGCCTCCCAGCATCTTGTaGACCTTGGACAGTGTCCTG +
Preference number: 2 (lower is better)
Translates to: GFSTQHCLGKWLWFCMEWPPSIL*TLDSVL
Trigger: CAGGACACTGTCCAAGGTGCACAAGATGCTGGGAGG...CCATTCCATGCAGAACCACAGCCATTTCCCCAGGCAGTGTTGGGTCGAGAATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR CCA 90 bp AGACTGAAAATGCCTCACACAAGCACGTGGTCAGCTGCCCTGTGGCTTCCTTGGGCCGGCTGCCCCGTGTaGATGATAAAACTCATCCAC +
Preference number: 2 (lower is better)
Translates to: RLKMPHTSTWSAALWLPWAGCPV*MIKLIH
Trigger: GTGGATGAGTTTTATCATCCACACGGGGCAGCCGGC...CCAAGGAAGCCACAGGGCAGCTGACCACGTGCTTGTGTGAGGCATTTTCAGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR CCA 90 bp GAAAATGCCTCACACAAGCACGTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCTCCAAGCACCCATGCTaGATGCTGAGTCCCAGGACA +
Preference number: 2 (lower is better)
Translates to: ENASHKHVVSCPVASLETSKHPC*MLSPRT
Trigger: TGTCCTGGGACTCAGCATCCAGCATGGGTGCTTGGA...GGTTTCCAAGGAAGCCACAGGGCAGCTGACCACGTGCTTGTGTGAGGCATTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR CCA 90 bp AGACTGAAAATGCCTCACACAAGCACGTGGTCAGCTGCCCTGTGGCTTCCTTGGTCCAAGCACCCATGCTaGATGCTGAGTCCCAGGACA +
Preference number: 2 (lower is better)
Translates to: RLKMPHTSTWSAALWLPWSKHPC*MLSPRT
Trigger: TGTCCTGGGACTCAGCATCCAGCATGGGTGCTTGGA...CCAAGGAAGCCACAGGGCAGCTGACCACGTGCTTGTGTGAGGCATTTTCAGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR CCA 90 bp TCTTCACCAAACAAGGGACCTCCCAGCATCTTGTGCACCTTGGACAGTGTCCTGTGGCGGTCAGGCACTTaGTCAAGAGCAGCAGAGCCA +
Preference number: 2 (lower is better)
Translates to: SSPNKGPPSILCTLDSVLWRSGT*SRAAEP
Trigger: TGGCTCTGCTGCTCTTGACCAAGTGCCTGACCGCCA...CAGGACACTGTCCAAGGTGCACAAGATGCTGGGAGGTCCCTTGTTTGGTGAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR CCA 90 bp GCTAGGCTGTGTGGGTTTAGAAAAGTGGATTCTCGACCCAACACTGCCTGGGGAGCCCTGTGGCTTCCTTaGAAACCCCTTCCACTCGTG +
Preference number: 2 (lower is better)
Translates to: ARLCGFRKVDSRPNTAWGALWLP*KPLPLV
Trigger: CACGAGTGGAAGGGGTTTCCAAGGAAGCCACAGGGC...TCCCCAGGCAGTGTTGGGTCGAGAATCCACTTTTCTAAACCCACACAGCCTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR CCA 90 bp ACACACACACACACACACACATCACACACAATTTCTTTGAGGAGAATCATGGGGGGTGCCCGGCCTCAGTaGCAGGAGCCGTGTCCTCCC +
Preference number: 2 (lower is better)
Translates to: THTHTHTSHTISLRRIMGGARPQ*QEPCPP
Trigger: GGGAGGACACGGCTCCTGCCACTGAGGCCGGGCACC...CCCCATGATTCTCCTCAAAGAAATTGTGTGTGATGTGTGTGTGTGTGTGTGTGT
56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR GCA 90 bp AGGGAGTCTCCTCGCATAAGCCACAAAGACACGTGGCAAAAAGCTGACATCTTTCCCCCGAGGGCCGGCTaGCCCGTGTGGATGATAAAA +
Preference number: 2 (lower is better)
Translates to: RESPRISHKDTWQKADIFPPRAG*PVWMIK
Trigger: TTTTATCATCCACACGGGGCAGCCGGCCCTCGGGGG...AAAGATGTCAGCTTTTTGCCACGTGTCTTTGTGGCTTATGCGAGGAGACTCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR GCA 90 bp GGATTCTCGACCCAACACTGCCTGGGGAAATGGCTGTGGTTCTGCATGGAATGGGGCTTGCTACCTGGCTaGCATCGCGAGTACTTTTCA +
Preference number: 2 (lower is better)
Translates to: GFSTQHCLGKWLWFCMEWGLLPG*HREYFS
Trigger: TGAAAAGTACTCGCGATGGCAGCCAGGTAGCAAGCC...CCATTCCATGCAGAACCACAGCCATTTCCCCAGGCAGTGTTGGGTCGAGAATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR GCA 90 bp TCTTCACCAAACAAGGGACCTCCCAGCATCTTGTGCACCTTGGACAGTGTCCTGAAGCACGTGGTCAGCTaGCCTGTGGCTTCCTTGGAA +
Preference number: 2 (lower is better)
Translates to: SSPNKGPPSILCTLDSVLKHVVS*PVASLE
Trigger: TTCCAAGGAAGCCACAGGGCAGCTGACCACGTGCTT...CAGGACACTGTCCAAGGTGCACAAGATGCTGGGAGGTCCCTTGTTTGGTGAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR GCA 90 bp GCTAGGCTGTGTGGGTTTAGAAAAGTGGATTCTCGACCCAACACTGCCTGGGGAAAGCACGTGGTCAGCTaGCCTGTGGCTTCCTTGGAA +
Preference number: 2 (lower is better)
Translates to: ARLCGFRKVDSRPNTAWGKHVVS*PVASLE
Trigger: TTCCAAGGAAGCCACAGGGCAGCTGACCACGTGCTT...TCCCCAGGCAGTGTTGGGTCGAGAATCCACTTTTCTAAACCCACACAGCCTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR CCA 90 bp GCTAGGCTGTGTGGGTTTAGAAAAGTGGATTCTCGACCCAACACTGCCTGGGGACTGCGGTTTAGGGTCTaGTGTGTGGTACGAGACCCA +
Preference number: 2 (lower is better)
Translates to: ARLCGFRKVDSRPNTAWGLRFRV*CVVRDP
Trigger: TGGGTCTCGTACCACACACCAGACCCTAAACCGCAG...TCCCCAGGCAGTGTTGGGTCGAGAATCCACTTTTCTAAACCCACACAGCCTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR CCA 90 bp GCTAGGCTGTGTGGGTTTAGAAAAGTGGATTCTCGACCCAACACTGCCTGGGGACCAGGACACGGGATTTaGACTCCTGGGTCCTTCTCA +
Preference number: 2 (lower is better)
Translates to: ARLCGFRKVDSRPNTAWGPGHGI*TPGSFS
Trigger: TGAGAAGGACCCAGGAGTCCAAATCCCGTGTCCTGG...TCCCCAGGCAGTGTTGGGTCGAGAATCCACTTTTCTAAACCCACACAGCCTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR CCA 90 bp GCTAGGCTGTGTGGGTTTAGAAAAGTGGATTCTCGACCCAACACTGCCTGGGGAACACCCAAGATAACATaGGCTGGGGGCTGGGGAACA +
Preference number: 2 (lower is better)
Translates to: ARLCGFRKVDSRPNTAWGTPKIT*AGGWGT
Trigger: TGTTCCCCAGCCCCCAGCCCATGTTATCTTGGGTGT...TCCCCAGGCAGTGTTGGGTCGAGAATCCACTTTTCTAAACCCACACAGCCTAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR TCA 90 bp TCATGGGGTAGAAGCCAAGAATCCAACACAGATCATCTGGAATTTCAGAACACGCGGTTCCTGTGGGGCTaGCGGTGTCCAGGGAGGACA +
Preference number: 2 (lower is better)
Translates to: SWGRSQESNTDHLEFQNTRFLWG*RCPGRT
Trigger: TGTCCTCCCTGGACACCGTCAGCCCCACAGGAACCG...CGTGTTCTGAAATTCCAGATGATCTGTGTTGGATTCTTGGCTTCTACCCCATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR TCA 90 bp AGGGAGTCTCCTCGCATAAGCCACAAAGACACGTGGCAAAAAGCTGACATCTTTACCCATGCTGGATGCTaGGTCCCAGGACACGGGATT +
Preference number: 2 (lower is better)
Translates to: RESPRISHKDTWQKADIFTHAGC*VPGHGI
Trigger: AATCCCGTGTCCTGGGACTCAGCATCCAGCATGGGT...AAAGATGTCAGCTTTTTGCCACGTGTCTTTGTGGCTTATGCGAGGAGACTCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR TCA 90 bp GCTAGGCTGTGTGGGTTTAGAAAAGTGGATTCTCGACCCAACACTGCCTGGGGAATGACATCCACACACTaGACACACCTGTACAGGCAC +
Preference number: 2 (lower is better)
Translates to: ARLCGFRKVDSRPNTAWGMTSTH*THLYRH
Trigger: GTGCCTGTACAGGTGTGTTCAGTGTGTGGATGTCAT...TCCCCAGGCAGTGTTGGGTCGAGAATCCACTTTTCTAAACCCACACAGCCTAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR GCA 90 bp TCTTCACCAAACAAGGGACCTCCCAGCATCTTGTGCACCTTGGACAGTGTCCTGAGGACAGCAAATGGCTaGCTTGTTTGCCACCATGAC +
Preference number: 2 (lower is better)
Translates to: SSPNKGPPSILCTLDSVLRTANG*LVCHHD
Trigger: GTCATGGTGGCAAACAAGGCAGCCATTTGCTGTCCT...CAGGACACTGTCCAAGGTGCACAAGATGCTGGGAGGTCCCTTGTTTGGTGAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR GCA 90 bp GCTAGGCTGTGTGGGTTTAGAAAAGTGGATTCTCGACCCAACACTGCCTGGGGAAGGACAGCAAATGGCTaGCTTGTTTGCCACCATGAC +
Preference number: 2 (lower is better)
Translates to: ARLCGFRKVDSRPNTAWGRTANG*LVCHHD
Trigger: GTCATGGTGGCAAACAAGGCAGCCATTTGCTGTCCT...TCCCCAGGCAGTGTTGGGTCGAGAATCCACTTTTCTAAACCCACACAGCCTAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR TCA 90 bp TCACATGCACAGTCCGAGATTCCTGGTTTATTCTATTGGAATAAAATACTCTGTCCAGGAGCCTGGGTGTaGGGGCCTGGCGGTCAGGCA +
Preference number: 2 (lower is better)
Translates to: SHAQSEIPGLFYWNKILCPGAWV*GPGGQA
Trigger: TGCCTGACCGCCAGGCCCTCACACCCAGGCTCCTGG...ACAGAGTATTTTATTCCAATAGAATAAACCAGGAATCTCGGACTGTGCATGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR GCA 90 bp GGGGTAGAAGCCAAGAATCCAACACAGATCATCTGGAATTTCAGAACACGGAGGAAGCACGTGGTCAGCTaGCCTGTGGCTTCCTTGGAA +
Preference number: 2 (lower is better)
Translates to: GVEAKNPTQIIWNFRTRRKHVVS*PVASLE
Trigger: TTCCAAGGAAGCCACAGGGCAGCTGACCACGTGCTT...CCTCCGTGTTCTGAAATTCCAGATGATCTGTGTTGGATTCTTGGCTTCTACCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR GCA 90 bp CAGCAAACTAGTCAATCACAGAATTTCTTTTTAAGTAGGTCCCAGTTGTGTTGCGGGCTTCCTCCCTCCTaGCCTGACGGCCCCACATCC +
Preference number: 2 (lower is better)
Translates to: QQTSQSQNFFLSRSQLCCGLPPS*PDGPTS
Trigger: GGATGTGGGGCCGTCAGGGCAGGAGGGAGGAAGCCC...GCAACACAACTGGGACCTACTTAAAAAGAAATTCTGTGATTGACTAGTTTGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR GCA 90 bp CAGCAAACTAGTCAATCACAGAATTTCTTTTTAAGTAGGTCCCAGTTGTGTTGCCTGGCGCCAGGACAGTaGTGGGCATCAGGTGCCCGG +
Preference number: 2 (lower is better)
Translates to: QQTSQSQNFFLSRSQLCCLAPGQ*WASGAR
Trigger: CCGGGCACCTGATGCCCAGCACTGTCCTGGCGCCAG...GCAACACAACTGGGACCTACTTAAAAAGAAATTCTGTGATTGACTAGTTTGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR GCA 90 bp TCATGGGGTAGAAGCCAAGAATCCAACACAGATCATCTGGAATTTCAGAACACGCCTCACTTGACTGCCTaGTCCCTGTGTCTGGCGCCA +
Preference number: 2 (lower is better)
Translates to: SWGRSQESNTDHLEFQNTPHLTA*SLCLAP
Trigger: TGGCGCCAGACACAGGGAGCAGGCAGTCAAGTGAGG...CGTGTTCTGAAATTCCAGATGATCTGTGTTGGATTCTTGGCTTCTACCCCATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR CCA 90 bp GGGGTAGAAGCCAAGAATCCAACACAGATCATCTGGAATTTCAGAACACGGAGGTTAGGGTCTGGTGTGTaGTACGAGACCCAGGAAGGC +
Preference number: 2 (lower is better)
Translates to: GVEAKNPTQIIWNFRTRRLGSGV*YETQEG
Trigger: GCCTTCCTGGGTCTCGTACCACACACCAGACCCTAA...CCTCCGTGTTCTGAAATTCCAGATGATCTGTGTTGGATTCTTGGCTTCTACCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR CCA 90 bp GGGGTAGAAGCCAAGAATCCAACACAGATCATCTGGAATTTCAGAACACGGAGGTGGTCAGCTGCCCTGTaGCTTCCTTGGAAACCCCTT +
Preference number: 2 (lower is better)
Translates to: GVEAKNPTQIIWNFRTRRWSAAL*LPWKPL
Trigger: AAGGGGTTTCCAAGGAAGCCACAGGGCAGCTGACCA...CCTCCGTGTTCTGAAATTCCAGATGATCTGTGTTGGATTCTTGGCTTCTACCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR TCA 90 bp GCTAGGCTGTGTGGGTTTAGAAAAGTGGATTCTCGACCCAACACTGCCTGGGGACACGTGGCAAAAAGCTaGCATCTTTCTTTCACAGGT +
Preference number: 2 (lower is better)
Translates to: ARLCGFRKVDSRPNTAWGHVAKS*HLSFTG
Trigger: ACCTGTGAAAGAAAGATGTCAGCTTTTTGCCACGTG...TCCCCAGGCAGTGTTGGGTCGAGAATCCACTTTTCTAAACCCACACAGCCTAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR GCA 90 bp CAGCAAACTAGTCAATCACAGAATTTCTTTTTAAGTAGGTCCCAGTTGTGTTGCCGGCCACGTGAAGGGTaGTCCCCACAGGACGCAGAG +
Preference number: 2 (lower is better)
Translates to: QQTSQSQNFFLSRSQLCCRPREG*SPQDAE
Trigger: CTCTGCGTCCTGTGGGGAGCACCCTTCACGTGGCCG...GCAACACAACTGGGACCTACTTAAAAAGAAATTCTGTGATTGACTAGTTTGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR GCA 90 bp GCTAGGCTGTGTGGGTTTAGAAAAGTGGATTCTCGACCCAACACTGCCTGGGGAACATACCACAGAGTGTaGCCTGAGAATCATATGCAG +
Preference number: 2 (lower is better)
Translates to: ARLCGFRKVDSRPNTAWGTYHRV*PENHMQ
Trigger: CTGCATATGATTCTCAGGGCACACTCTGTGGTATGT...TCCCCAGGCAGTGTTGGGTCGAGAATCCACTTTTCTAAACCCACACAGCCTAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR GCA 90 bp TCACATGCACAGTCCGAGATTCCTGGTTTATTCTATTGGAATAAAATACTCTGTCTGGCGCCAGGACAGTaGTGGGCATCAGGTGCCCGG +
Preference number: 2 (lower is better)
Translates to: SHAQSEIPGLFYWNKILCLAPGQ*WASGAR
Trigger: CCGGGCACCTGATGCCCAGCACTGTCCTGGCGCCAG...ACAGAGTATTTTATTCCAATAGAATAAACCAGGAATCTCGGACTGTGCATGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR CCA 90 bp GAAAATGCCTCACACAAGCACGTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCAGCCACAAAGACACGTaGCAAAAAGCTGACATCTTT +
Preference number: 2 (lower is better)
Translates to: ENASHKHVVSCPVASLETSHKDT*QKADIF
Trigger: AAAGATGTCAGCTTTTTGCCACGTGTCTTTGTGGCT...GGTTTCCAAGGAAGCCACAGGGCAGCTGACCACGTGCTTGTGTGAGGCATTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR TCA 90 bp TCTTCACCAAACAAGGGACCTCCCAGCATCTTGTGCACCTTGGACAGTGTCCTGATATGCAGAACAGACTaGAAATGCCTCACACAAGCA +
Preference number: 2 (lower is better)
Translates to: SSPNKGPPSILCTLDSVLICRTD*KCLTQA
Trigger: TGCTTGTGTGAGGCATTTTCAGTCTGTTCTGCATAT...CAGGACACTGTCCAAGGTGCACAAGATGCTGGGAGGTCCCTTGTTTGGTGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR GCA 90 bp ACACACACACACACACACACATCACACACAATTTCTTTGAGGAGAATCATGGGGCTTTTCACAGCATCCTaGGGTGATGGATCCCGAGGC +
Preference number: 2 (lower is better)
Translates to: THTHTHTSHTISLRRIMGLFTAS*GDGSRG
Trigger: GCCTCGGGATCCATCACCGCAGGATGCTGTGAAAAG...CCCCATGATTCTCCTCAAAGAAATTGTGTGTGATGTGTGTGTGTGTGTGTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR GCA 90 bp CAGCAAACTAGTCAATCACAGAATTTCTTTTTAAGTAGGTCCCAGTTGTGTTGCCCACTGGCAAGGGCTTaGTACCTGGCTGCCATCGCG +
Preference number: 2 (lower is better)
Translates to: QQTSQSQNFFLSRSQLCCPLARA*YLAAIA
Trigger: CGCGATGGCAGCCAGGTAGCAAGCCCTTGCCAGTGG...GCAACACAACTGGGACCTACTTAAAAAGAAATTCTGTGATTGACTAGTTTGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR CCA 90 bp ACACACACACACACACACACATCACACACAATTTCTTTGAGGAGAATCATGGGGTCCAAGCACCCATGCTaGATGCTGAGTCCCAGGACA +
Preference number: 2 (lower is better)
Translates to: THTHTHTSHTISLRRIMGSKHPC*MLSPRT
Trigger: TGTCCTGGGACTCAGCATCCAGCATGGGTGCTTGGA...CCCCATGATTCTCCTCAAAGAAATTGTGTGTGATGTGTGTGTGTGTGTGTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR CCA 90 bp CAGCAAACTAGTCAATCACAGAATTTCTTTTTAAGTAGGTCCCAGTTGTGTTGCCCGTCTACGTCCACCTaGACCGGACAGGGCTGCACA +
Preference number: 2 (lower is better)
Translates to: QQTSQSQNFFLSRSQLCCPSTST*TGQGCT
Trigger: TGTGCAGCCCTGTCCGGTCCAGGTGGACGTAGACGG...GCAACACAACTGGGACCTACTTAAAAAGAAATTCTGTGATTGACTAGTTTGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR TCA 90 bp CAGCAAACTAGTCAATCACAGAATTTCTTTTTAAGTAGGTCCCAGTTGTGTTGCGGGTCAGACCTCACTTaGCTGCCTGCTCCCTGTGTC +
Preference number: 2 (lower is better)
Translates to: QQTSQSQNFFLSRSQLCCGSDLT*LPAPCV
Trigger: GACACAGGGAGCAGGCAGTCAAGTGAGGTCTGACCC...GCAACACAACTGGGACCTACTTAAAAAGAAATTCTGTGATTGACTAGTTTGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR GCA 90 bp CAGCAAACTAGTCAATCACAGAATTTCTTTTTAAGTAGGTCCCAGTTGTGTTGCCCTCACTTGACTGCCTaGTCCCTGTGTCTGGCGCCA +
Preference number: 2 (lower is better)
Translates to: QQTSQSQNFFLSRSQLCCPHLTA*SLCLAP
Trigger: TGGCGCCAGACACAGGGAGCAGGCAGTCAAGTGAGG...GCAACACAACTGGGACCTACTTAAAAAGAAATTCTGTGATTGACTAGTTTGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR GCA 90 bp GCTAGGCTGTGTGGGTTTAGAAAAGTGGATTCTCGACCCAACACTGCCTGGGGAATCAACTGCTCTAAATaGTCCCTTTCTTCACCAAAC +
Preference number: 2 (lower is better)
Translates to: ARLCGFRKVDSRPNTAWGINCSK*SLSSPN
Trigger: GTTTGGTGAAGAAAGGGAGCATTTAGAGCAGTTGAT...TCCCCAGGCAGTGTTGGGTCGAGAATCCACTTTTCTAAACCCACACAGCCTAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR GCA 90 bp GCTAGGCTGTGTGGGTTTAGAAAAGTGGATTCTCGACCCAACACTGCCTGGGGAAGTTTCAGAGTGTTGTaGCTTCAGGTAAGGAAATTC +
Preference number: 2 (lower is better)
Translates to: ARLCGFRKVDSRPNTAWGSFRVL*LQVRKF
Trigger: GAATTTCCTTACCTGAAGGCACAACACTCTGAAACT...TCCCCAGGCAGTGTTGGGTCGAGAATCCACTTTTCTAAACCCACACAGCCTAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR GCA 90 bp ACACACACACACACACACACATCACACACAATTTCTTTGAGGAGAATCATGGGGAATGGCTGCCTTGTTTaGCACCATGACATCCAGTGC +
Preference number: 2 (lower is better)
Translates to: THTHTHTSHTISLRRIMGNGCLV*HHDIQC
Trigger: GCACTGGATGTCATGGTGGCAAACAAGGCAGCCATT...CCCCATGATTCTCCTCAAAGAAATTGTGTGTGATGTGTGTGTGTGTGTGTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR GCA 90 bp CAGCAAACTAGTCAATCACAGAATTTCTTTTTAAGTAGGTCCCAGTTGTGTTGCCAGACCTCACTTGACTaGCTGCTCCCTGTGTCTGGC +
Preference number: 2 (lower is better)
Translates to: QQTSQSQNFFLSRSQLCCQTSLD*LLPVSG
Trigger: GCCAGACACAGGGAGCAGGCAGTCAAGTGAGGTCTG...GCAACACAACTGGGACCTACTTAAAAAGAAATTCTGTGATTGACTAGTTTGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR GCA 90 bp GGATTCTCGACCCAACACTGCCTGGGGAAATGGCTGTGGTTCTGCATGGAATGGAAATGTGTCTTTTGTTaGATAGCCCTATGGGTTAAT +
Preference number: 2 (lower is better)
Translates to: GFSTQHCLGKWLWFCMEWKCVFC*IALWVN
Trigger: ATTAACCCATAGGGCTATGCAACAAAAGACACATTT...CCATTCCATGCAGAACCACAGCCATTTCCCCAGGCAGTGTTGGGTCGAGAATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR CCA 90 bp CAGCAAACTAGTCAATCACAGAATTTCTTTTTAAGTAGGTCCCAGTTGTGTTGCGCCGGCTGCCCCGTGTaGATGATAAAACTCATCCAC +
Preference number: 2 (lower is better)
Translates to: QQTSQSQNFFLSRSQLCCAGCPV*MIKLIH
Trigger: GTGGATGAGTTTTATCATCCACACGGGGCAGCCGGC...GCAACACAACTGGGACCTACTTAAAAAGAAATTCTGTGATTGACTAGTTTGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR CCA 90 bp CAGCAAACTAGTCAATCACAGAATTTCTTTTTAAGTAGGTCCCAGTTGTGTTGCTTAGGGTCTGGTGTGTaGTACGAGACCCAGGAAGGC +
Preference number: 2 (lower is better)
Translates to: QQTSQSQNFFLSRSQLCCLGSGV*YETQEG
Trigger: GCCTTCCTGGGTCTCGTACCACACACCAGACCCTAA...GCAACACAACTGGGACCTACTTAAAAAGAAATTCTGTGATTGACTAGTTTGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR CCA 90 bp CAGCAAACTAGTCAATCACAGAATTTCTTTTTAAGTAGGTCCCAGTTGTGTTGCCTGCGGTTTAGGGTCTaGTGTGTGGTACGAGACCCA +
Preference number: 2 (lower is better)
Translates to: QQTSQSQNFFLSRSQLCCLRFRV*CVVRDP
Trigger: TGGGTCTCGTACCACACACCAGACCCTAAACCGCAG...GCAACACAACTGGGACCTACTTAAAAAGAAATTCTGTGATTGACTAGTTTGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR CCA 90 bp CAGCAAACTAGTCAATCACAGAATTTCTTTTTAAGTAGGTCCCAGTTGTGTTGCCGGGATTTGGACTCCTaGGTCCTTCTCAGCCACACA +
Preference number: 2 (lower is better)
Translates to: QQTSQSQNFFLSRSQLCCRDLDS*VLLSHT
Trigger: TGTGTGGCTGAGAAGGACCCAGGAGTCCAAATCCCG...GCAACACAACTGGGACCTACTTAAAAAGAAATTCTGTGATTGACTAGTTTGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR CAA 90 bp GAACAAGAGACAAAACGTCAGTGTCAAAATACACATCCTTCTACTTaGCAACAGGAGCACAGTGATCACATGCACAGTCCGAGATTCCTG +
Preference number: 2 (lower is better)
Translates to: EQETKRQCQNTHPST*QQEHSDHMHSPRFL
Trigger: CAGGAATCTCGGACTGTGCATGTGATCACTGTGCTCCTGTTGCAAAGTAGAAGGATGTGTATTTTGACACTGACGTTTTGTCTCTTGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR TCA 90 bp TCACATGCACAGTCCGAGATTCCTGGTTTATTCTATTGGAATAAAATACTCTGTCTCGGTCACTTGCTCTaGGTTTCATTCCAGCTGGGG +
Preference number: 2 (lower is better)
Translates to: SHAQSEIPGLFYWNKILCLGHLL*VSFQLG
Trigger: CCCCAGCTGGAATGAAACTCAGAGCAAGTGACCGAG...ACAGAGTATTTTATTCCAATAGAATAAACCAGGAATCTCGGACTGTGCATGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR GCA 90 bp CAGCAAACTAGTCAATCACAGAATTTCTTTTTAAGTAGGTCCCAGTTGTGTTGCGGCTTGCTACCTGGCTaGCATCGCGAGTACTTTTCA +
Preference number: 2 (lower is better)
Translates to: QQTSQSQNFFLSRSQLCCGLLPG*HREYFS
Trigger: TGAAAAGTACTCGCGATGGCAGCCAGGTAGCAAGCC...GCAACACAACTGGGACCTACTTAAAAAGAAATTCTGTGATTGACTAGTTTGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR GCA 90 bp ACACACACACACACACACACATCACACACAATTTCTTTGAGGAGAATCATGGGGCACACCACCATCAACTaGTCTAAATGCTCCCTTTCT +
Preference number: 2 (lower is better)
Translates to: THTHTHTSHTISLRRIMGHTTIN*SKCSLS
Trigger: AGAAAGGGAGCATTTAGAGCAGTTGATGGTGGTGTG...CCCCATGATTCTCCTCAAAGAAATTGTGTGTGATGTGTGTGTGTGTGTGTGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR GCA 90 bp CAGCAAACTAGTCAATCACAGAATTTCTTTTTAAGTAGGTCCCAGTTGTGTTGCCACCTGTACAGGCACTaGATCTCCTGTGACACAGAC +
Preference number: 2 (lower is better)
Translates to: QQTSQSQNFFLSRSQLCCHLYRH*ISCDTD
Trigger: GTCTGTGTCACAGGAGATGCAGTGCCTGTACAGGTG...GCAACACAACTGGGACCTACTTAAAAAGAAATTCTGTGATTGACTAGTTTGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR CCA 90 bp TCACATGCACAGTCCGAGATTCCTGGTTTATTCTATTGGAATAAAATACTCTGTCCAGGACACGGGATTTaGACTCCTGGGTCCTTCTCA +
Preference number: 2 (lower is better)
Translates to: SHAQSEIPGLFYWNKILCPGHGI*TPGSFS
Trigger: TGAGAAGGACCCAGGAGTCCAAATCCCGTGTCCTGG...ACAGAGTATTTTATTCCAATAGAATAAACCAGGAATCTCGGACTGTGCATGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR CCA 90 bp TCACATGCACAGTCCGAGATTCCTGGTTTATTCTATTGGAATAAAATACTCTGTTGGTCAGCTGCCCTGTaGCTTCCTTGGAAACCCCTT +
Preference number: 2 (lower is better)
Translates to: SHAQSEIPGLFYWNKILCWSAAL*LPWKPL
Trigger: AAGGGGTTTCCAAGGAAGCCACAGGGCAGCTGACCA...ACAGAGTATTTTATTCCAATAGAATAAACCAGGAATCTCGGACTGTGCATGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR TCA 90 bp TCACATGCACAGTCCGAGATTCCTGGTTTATTCTATTGGAATAAAATACTCTGTCCTTGTTTGCCACCATaGCATCCAGTGCTCTCCACT +
Preference number: 2 (lower is better)
Translates to: SHAQSEIPGLFYWNKILCPCLPP*HPVLST
Trigger: AGTGGAGAGCACTGGATGTCATGGTGGCAAACAAGG...ACAGAGTATTTTATTCCAATAGAATAAACCAGGAATCTCGGACTGTGCATGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR GCA 90 bp CAGCAAACTAGTCAATCACAGAATTTCTTTTTAAGTAGGTCCCAGTTGTGTTGCAATGGCTGCCTTGTTTaGCACCATGACATCCAGTGC +
Preference number: 2 (lower is better)
Translates to: QQTSQSQNFFLSRSQLCCNGCLV*HHDIQC
Trigger: GCACTGGATGTCATGGTGGCAAACAAGGCAGCCATT...GCAACACAACTGGGACCTACTTAAAAAGAAATTCTGTGATTGACTAGTTTGCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR GCA 90 bp CAGCAAACTAGTCAATCACAGAATTTCTTTTTAAGTAGGTCCCAGTTGTGTTGCAGGACAGCAAATGGCTaGCTTGTTTGCCACCATGAC +
Preference number: 2 (lower is better)
Translates to: QQTSQSQNFFLSRSQLCCRTANG*LVCHHD
Trigger: GTCATGGTGGCAAACAAGGCAGCCATTTGCTGTCCT...GCAACACAACTGGGACCTACTTAAAAAGAAATTCTGTGATTGACTAGTTTGCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR GCA 90 bp TCACATGCACAGTCCGAGATTCCTGGTTTATTCTATTGGAATAAAATACTCTGTCACCTGTACAGGCACTaGATCTCCTGTGACACAGAC +
Preference number: 2 (lower is better)
Translates to: SHAQSEIPGLFYWNKILCHLYRH*ISCDTD
Trigger: GTCTGTGTCACAGGAGATGCAGTGCCTGTACAGGTG...ACAGAGTATTTTATTCCAATAGAATAAACCAGGAATCTCGGACTGTGCATGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR CCA 90 bp TCATGGGGTAGAAGCCAAGAATCCAACACAGATCATCTGGAATTTCAGAACACGAGCCACAAAGACACGTaGCAAAAAGCTGACATCTTT +
Preference number: 2 (lower is better)
Translates to: SWGRSQESNTDHLEFQNTSHKDT*QKADIF
Trigger: AAAGATGTCAGCTTTTTGCCACGTGTCTTTGTGGCT...CGTGTTCTGAAATTCCAGATGATCTGTGTTGGATTCTTGGCTTCTACCCCATGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR GCA 90 bp CAGCAAACTAGTCAATCACAGAATTTCTTTTTAAGTAGGTCCCAGTTGTGTTGCAAATGGCTGTGGTTCTaGATGGAATGGACACATTCG +
Preference number: 2 (lower is better)
Translates to: QQTSQSQNFFLSRSQLCCKWLWF*MEWTHS
Trigger: CGAATGTGTCCATTCCATGCAGAACCACAGCCATTT...GCAACACAACTGGGACCTACTTAAAAAGAAATTCTGTGATTGACTAGTTTGCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR GCA 90 bp TCACATGCACAGTCCGAGATTCCTGGTTTATTCTATTGGAATAAAATACTCTGTCACACCACCATCAACTaGTCTAAATGCTCCCTTTCT +
Preference number: 2 (lower is better)
Translates to: SHAQSEIPGLFYWNKILCHTTIN*SKCSLS
Trigger: AGAAAGGGAGCATTTAGAGCAGTTGATGGTGGTGTG...ACAGAGTATTTTATTCCAATAGAATAAACCAGGAATCTCGGACTGTGCATGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR CCA 90 bp CAGCAAACTAGTCAATCACAGAATTTCTTTTTAAGTAGGTCCCAGTTGTGTTGCTGTTGCATAGCCCTATaGGTTAATGACATCCACACA +
Preference number: 2 (lower is better)
Translates to: QQTSQSQNFFLSRSQLCCCCIAL*VNDIHT
Trigger: TGTGTGGATGTCATTAACCCATAGGGCTATGCAACA...GCAACACAACTGGGACCTACTTAAAAAGAAATTCTGTGATTGACTAGTTTGCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR TCA 90 bp TCACATGCACAGTCCGAGATTCCTGGTTTATTCTATTGGAATAAAATACTCTGTATATGCAGAACAGACTaGAAATGCCTCACACAAGCA +
Preference number: 2 (lower is better)
Translates to: SHAQSEIPGLFYWNKILCICRTD*KCLTQA
Trigger: TGCTTGTGTGAGGCATTTTCAGTCTGTTCTGCATAT...ACAGAGTATTTTATTCCAATAGAATAAACCAGGAATCTCGGACTGTGCATGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR GCA 90 bp CAGCAAACTAGTCAATCACAGAATTTCTTTTTAAGTAGGTCCCAGTTGTGTTGCATCAACTGCTCTAAATaGTCCCTTTCTTCACCAAAC +
Preference number: 2 (lower is better)
Translates to: QQTSQSQNFFLSRSQLCCINCSK*SLSSPN
Trigger: GTTTGGTGAAGAAAGGGAGCATTTAGAGCAGTTGAT...GCAACACAACTGGGACCTACTTAAAAAGAAATTCTGTGATTGACTAGTTTGCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR CCA 90 bp CAGCAAACTAGTCAATCACAGAATTTCTTTTTAAGTAGGTCCCAGTTGTGTTGCGATGCACTTCAAATTTaGCAGCTCACTATGAGATTC +
Preference number: 2 (lower is better)
Translates to: QQTSQSQNFFLSRSQLCCDALQI*QLTMRF
Trigger: GAATCTCATAGTGAGCTGCCAAATTTGAAGTGCATC...GCAACACAACTGGGACCTACTTAAAAAGAAATTCTGTGATTGACTAGTTTGCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR GCA 90 bp TCACATGCACAGTCCGAGATTCCTGGTTTATTCTATTGGAATAAAATACTCTGTAAATGTGTCTTTTGTTaGATAGCCCTATGGGTTAAT +
Preference number: 2 (lower is better)
Translates to: SHAQSEIPGLFYWNKILCKCVFC*IALWVN
Trigger: ATTAACCCATAGGGCTATGCAACAAAAGACACATTT...ACAGAGTATTTTATTCCAATAGAATAAACCAGGAATCTCGGACTGTGCATGTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR CAA 90 bp TGGCGCCAGGACAGTGCTGGGCATCAGGTGCCCGGCCTCAGTGGCAGGAGCCGTTCCACTGGCAAGGGCTaGCTACCTGGCTGCCATCGC +
Preference number: 3 (lower is better)
Translates to: WRQDSAGHQVPGLSGRSRSTGKG*LPGCHR
Trigger: GCGATGGCAGCCAGGTAGCAAGCCCTTGCCAGTGGA...ACGGCTCCTGCCACTGAGGCCGGGCACCTGATGCCCAGCACTGTCCTGGCGCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR TCA 72 bp GGTGGTGGTAGCTGTGCCGTGCTCGGCCACCCGAGCTaGGTCCCAGGGTGCAGTGGTAACCGTTGGGCACGC +
Preference number: 3 (lower is better)
Translates to: GGGSCAVLGHPS*VPGCSGNRWAR
Trigger: GCGTGCCCAACGGTTACCACTGCACCCTGGGACTCAGCTCGGGTGGCCGAGCACGGCACAGCTACCACCACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
3UTR GCA 72 bp CCGTCCCGAGGTCTCGGCGCACTTTCAGGTGGGCCCTaGTTCTCTGTGCCGCACGGCCACGTGAAGGGTGCT +
Preference number: 3 (lower is better)
Translates to: PSRGLGALSGGP*FSVPHGHVKGA
Trigger: AGCACCCTTCACGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTCGGGACGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR CAA 90 bp TGGCGCCAGGACAGTGCTGGGCATCAGGTGCCCGGCCTCAGTGGCAGGAGCCGTCCCAGGACACGGGATTaGGACTCCTGGGTCCTTCTC +
Preference number: 3 (lower is better)
Translates to: WRQDSAGHQVPGLSGRSRPRTRD*DSWVLL
Trigger: GAGAAGGACCCAGGAGTCCAAATCCCGTGTCCTGGG...ACGGCTCCTGCCACTGAGGCCGGGCACCTGATGCCCAGCACTGTCCTGGCGCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR TCA 72 bp CCTCGCCTCACACCACAGTGCCCAGGAGCCTGGGTGTaGGGGCCTGGCGGTCAGGCACTTGGTCAAGAGCAG +
Preference number: 3 (lower is better)
Translates to: PRLTPQCPGAWV*GPGGQALGQEQ
Trigger: CTGCTCTTGACCAAGTGCCTGACCGCCAGGCCCTCACACCCAGGCTCCTGGGCACTGTGGTGTGAGGCGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR GCA 72 bp CCAGTGGTCTTGGTCAGGGTGGTGGTAGCTGTGCCGTaGTCGGCCACCCGAGCTGAGTCCCAGGGTGCAGTG +
Preference number: 3 (lower is better)
Translates to: PVVLVRVVVAVP*SATRAESQGAV
Trigger: CACTGCACCCTGGGACTCAGCTCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGACCAAGACCACTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
3UTR GCA 72 bp GCCCTGCTTCTCTGTGCCGCACGGCCACGTGAAGGGTaGTCCCCACAGGACGCAGAGCTCCTCACAACGGCT +
Preference number: 3 (lower is better)
Translates to: ALLLCAARPREG*SPQDAELLTTA
Trigger: AGCCGTTGTGAGGAGCTCTGCGTCCTGTGGGGAGCACCCTTCACGTGGCCGTGCGGCACAGAGAAGCAGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR GCA 72 bp TTGACTGCCTGCTCCCTGTGTCTGGCGCCAGGACAGTaGTGGGCATCAGGTGCCCGGCCTCAGTGGCAGGAG +
Preference number: 3 (lower is better)
Translates to: LTACSLCLAPGQ*WASGARPQWQE
Trigger: CTCCTGCCACTGAGGCCGGGCACCTGATGCCCAGCACTGTCCTGGCGCCAGACACAGGGAGCAGGCAGTCAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR CCA 72 bp ATCCCCTCCGTCCCGAGGTCTCGGCGCACTTTCAGGTaGGCCCTGCTTCTCTGTGCCGCACGGCCACGTGAA +
Preference number: 3 (lower is better)
Translates to: IPSVPRSRRTFR*ALLLCAARPRE
Trigger: TTCACGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTCGGGACGGAGGGGAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR CCA 72 bp CCAGGACAGTGCTGGGCATCAGGTGCCCGGCCTCAGTaGCAGGAGCCGTGTCCTCCCTCGGTCACTTGCTCT +
Preference number: 3 (lower is better)
Translates to: PGQCWASGARPQ*QEPCPPSVTCS
Trigger: AGAGCAAGTGACCGAGGGAGGACACGGCTCCTGCCACTGAGGCCGGGCACCTGATGCCCAGCACTGTCCTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR GCA 72 bp GCTTGCCTGAGTGAGCATTCGCTGACACTGGCGGGCTaGACAAGCCACGACTGTGTCCCCCTCCCCATCCCC +
Preference number: 3 (lower is better)
Translates to: ACLSEHSLTLAG*TSHDCVPLPIP
Trigger: GGGGATGGGGAGGGGGACACAGTCGTGGCTTGTGCAGCCCGCCAGTGTCAGCGAATGCTCACTCAGGCAAGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR TCA 72 bp GTGGCAGGAGCCGTGTCCTCCCTCGGTCACTTGCTCTaGGTTTCATTCCAGCTGGGGCTTCCTCCCTCCTGC +
Preference number: 3 (lower is better)
Translates to: VAGAVSSLGHLL*VSFQLGLPPSC
Trigger: GCAGGAGGGAGGAAGCCCCAGCTGGAATGAAACTCAGAGCAAGTGACCGAGGGAGGACACGGCTCCTGCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR GCA 72 bp TCACCAAGGTGGGCAAGGCCTCCCCCGAGGGCCGGCTaGCCCGTGTGGATGATAAAACTCATCCACTGGAAC +
Preference number: 3 (lower is better)
Translates to: SPRWARPPPRAG*PVWMIKLIHWN
Trigger: GTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTCGGGGGAGGCCTTGCCCACCTTGGTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR CAA 90 bp GCTTGCCTGAGTGAGCATTCGCTGACACTGGCGGGCTGCACAAGCCACGACTGTCCCAGGACACGGGATTaGGACTCCTGGGTCCTTCTC +
Preference number: 3 (lower is better)
Translates to: ACLSEHSLTLAGCTSHDCPRTRD*DSWVLL
Trigger: GAGAAGGACCCAGGAGTCCAAATCCCGTGTCCTGGG...ACAGTCGTGGCTTGTGCAGCCCGCCAGTGTCAGCGAATGCTCACTCAGGCAAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR TCA 72 bp CTCCTCACAACGGCTCCAAGCACCCATGCTGGATGCTaGGTCCCAGGACACGGGATTTGGACTCCTGGGTCC +
Preference number: 3 (lower is better)
Translates to: LLTTAPSTHAGC*VPGHGIWTPGS
Trigger: GGACCCAGGAGTCCAAATCCCGTGTCCTGGGACTCAGCATCCAGCATGGGTGCTTGGAGCCGTTGTGAGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR TCA 72 bp GCTGCCATCGCGAGTACTTTTCACAGCATCCTGCGGTaGTGGATCCCGAGGCCTCGCCTCACACCACAGTGC +
Preference number: 3 (lower is better)
Translates to: AAIASTFHSILR*WIPRPRLTPQC
Trigger: GCACTGTGGTGTGAGGCGAGGCCTCGGGATCCATCACCGCAGGATGCTGTGAAAAGTACTCGCGATGGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR GCA 72 bp ACCTGGCTGCCATCGCGAGTACTTTTCACAGCATCCTaGGGTGATGGATCCCGAGGCCTCGCCTCACACCAC +
Preference number: 3 (lower is better)
Translates to: TWLPSRVLFTAS*GDGSRGLASHH
Trigger: GTGGTGTGAGGCGAGGCCTCGGGATCCATCACCGCAGGATGCTGTGAAAAGTACTCGCGATGGCAGCCAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR CCA 72 bp CCACACACAGCAGCCTGCGGTTTAGGGTCTGGTGTGTaGTACGAGACCCAGGAAGGCAGGACAGGAAGGGGA +
Preference number: 3 (lower is better)
Translates to: PHTAACGLGSGV*YETQEGRTGRG
Trigger: TCCCCTTCCTGTCCTGCCTTCCTGGGTCTCGTACCACACACCAGACCCTAAACCGCAGGCTGCTGTGTGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR CCA 72 bp CGCAGAGCTCCTCACAACGGCTCCAAGCACCCATGCTaGATGCTGAGTCCCAGGACACGGGATTTGGACTCC +
Preference number: 3 (lower is better)
Translates to: RRAPHNGSKHPC*MLSPRTRDLDS
Trigger: GGAGTCCAAATCCCGTGTCCTGGGACTCAGCATCCAGCATGGGTGCTTGGAGCCGTTGTGAGGAGCTCTGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR GCA 72 bp CCAGTGCTCTCCACTGGCAAGGGCTTGCTACCTGGCTaGCATCGCGAGTACTTTTCACAGCATCCTGCGGTG +
Preference number: 3 (lower is better)
Translates to: PVLSTGKGLLPG*HREYFSQHPAV
Trigger: CACCGCAGGATGCTGTGAAAAGTACTCGCGATGGCAGCCAGGTAGCAAGCCCTTGCCAGTGGAGAGCACTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR CCA 72 bp TTCTCAGCCACACACAGCAGCCTGCGGTTTAGGGTCTaGTGTGTGGTACGAGACCCAGGAAGGCAGGACAGG +
Preference number: 3 (lower is better)
Translates to: FSATHSSLRFRV*CVVRDPGRQDR
Trigger: CCTGTCCTGCCTTCCTGGGTCTCGTACCACACACCAGACCCTAAACCGCAGGCTGCTGTGTGTGGCTGAGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR CCA 72 bp TGGATGCTGAGTCCCAGGACACGGGATTTGGACTCCTaGGTCCTTCTCAGCCACACACAGCAGCCTGCGGTT +
Preference number: 3 (lower is better)
Translates to: WMLSPRTRDLDS*VLLSHTQQPAV
Trigger: AACCGCAGGCTGCTGTGTGTGGCTGAGAAGGACCCAGGAGTCCAAATCCCGTGTCCTGGGACTCAGCATCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR CCA 72 bp CACACAAGCACGTGGTCAGCTGCCCTGTGGCTTCCTTaGAAACCCCTTCCACTCGTGGGAGGAGGACAGCAA +
Preference number: 3 (lower is better)
Translates to: HTSTWSAALWLP*KPLPLVGGGQQ
Trigger: TTGCTGTCCTCCTCCCACGAGTGGAAGGGGTTTCCAAGGAAGCCACAGGGCAGCTGACCACGTGCTTGTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR CAA 90 bp CTCGTGGGAGGAGGACAGCAAATGGCTGCCTTGTTTGCCACCATGACATCCAGTCCCAGGACACGGGATTaGGACTCCTGGGTCCTTCTC +
Preference number: 3 (lower is better)
Translates to: LVGGGQQMAALFATMTSSPRTRD*DSWVLL
Trigger: GAGAAGGACCCAGGAGTCCAAATCCCGTGTCCTGGG...ACTGGATGTCATGGTGGCAAACAAGGCAGCCATTTGCTGTCCTCCTCCCACGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR GCA 72 bp GATAAAACTCATCCACTGGAACACACGCCTGCTGCATaGAGGCGTCTGAGCGGTCACGGTGCAGCTAGCACC +
Preference number: 3 (lower is better)
Translates to: DKTHPLEHTPAA*RRLSGHGAAST
Trigger: GGTGCTAGCTGCACCGTGACCGCTCAGACGCCTGCATGCAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
3UTR GCA 72 bp GCAAATGGCTGCCTTGTTTGCCACCATGACATCCAGTaGTCTCCACTGGCAAGGGCTTGCTACCTGGCTGCC +
Preference number: 3 (lower is better)
Translates to: ANGCLVCHHDIQ*SPLARACYLAA
Trigger: GGCAGCCAGGTAGCAAGCCCTTGCCAGTGGAGAGCACTGGATGTCATGGTGGCAAACAAGGCAGCCATTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR GCA 72 bp CACCATGACATCCAGTGCTCTCCACTGGCAAGGGCTTaGTACCTGGCTGCCATCGCGAGTACTTTTCACAGC +
Preference number: 3 (lower is better)
Translates to: HHDIQCSPLARA*YLAAIASTFHS
Trigger: GCTGTGAAAAGTACTCGCGATGGCAGCCAGGTAGCAAGCCCTTGCCAGTGGAGAGCACTGGATGTCATGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR GCA 72 bp ACTCGTGGGAGGAGGACAGCAAATGGCTGCCTTGTTTaGCACCATGACATCCAGTGCTCTCCACTGGCAAGG +
Preference number: 3 (lower is better)
Translates to: TRGRRTANGCLV*HHDIQCSPLAR
Trigger: CCTTGCCAGTGGAGAGCACTGGATGTCATGGTGGCAAACAAGGCAGCCATTTGCTGTCCTCCTCCCACGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR CCA 72 bp AAAATGCCTCACACAAGCACGTGGTCAGCTGCCCTGTaGCTTCCTTGGAAACCCCTTCCACTCGTGGGAGGA +
Preference number: 3 (lower is better)
Translates to: KMPHTSTWSAAL*LPWKPLPLVGG
Trigger: TCCTCCCACGAGTGGAAGGGGTTTCCAAGGAAGCCACAGGGCAGCTGACCACGTGCTTGTGTGAGGCATTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR CAA 90 bp GCTAGGCTGTGTGGGTTTAGAAAAGTGGATTCTCGACCCAACACTGCCTGGGGAGGACCTCCCAGCATCTaGTGCACCTTGGACAGTGTC +
Preference number: 3 (lower is better)
Translates to: ARLCGFRKVDSRPNTAWGGPPSI*CTLDSV
Trigger: GACACTGTCCAAGGTGCACAAGATGCTGGGAGGTCC...TCCCCAGGCAGTGTTGGGTCGAGAATCCACTTTTCTAAACCCACACAGCCTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR TCA 72 bp GAGGAGGACAGCAAATGGCTGCCTTGTTTGCCACCATaGCATCCAGTGCTCTCCACTGGCAAGGGCTTGCTA +
Preference number: 3 (lower is better)
Translates to: EEDSKWLPCLPP*HPVLSTGKGLL
Trigger: TAGCAAGCCCTTGCCAGTGGAGAGCACTGGATGTCATGGTGGCAAACAAGGCAGCCATTTGCTGTCCTCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR GCA 72 bp CAGACTGAAAATGCCTCACACAAGCACGTGGTCAGCTaGCCTGTGGCTTCCTTGGAAACCCCTTCCACTCGT +
Preference number: 3 (lower is better)
Translates to: QTENASHKHVVS*PVASLETPSTR
Trigger: ACGAGTGGAAGGGGTTTCCAAGGAAGCCACAGGGCAGCTGACCACGTGCTTGTGTGAGGCATTTTCAGTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR CCA 72 bp CACTGCCTGGGGAAATGGCTGTGGTTCTGCATGGAATaGACACATTCGACACCCAAGATAACATGGGCTGGG +
Preference number: 3 (lower is better)
Translates to: HCLGKWLWFCME*THSTPKITWAG
Trigger: CCCAGCCCATGTTATCTTGGGTGTCGAATGTGTCCATTCCATGCAGAACCACAGCCATTTCCCCAGGCAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR CAA 90 bp GCTAGGCTGTGTGGGTTTAGAAAAGTGGATTCTCGACCCAACACTGCCTGGGGACAGCAAATGGCTGCCTaGTTTGCCACCATGACATCC +
Preference number: 3 (lower is better)
Translates to: ARLCGFRKVDSRPNTAWGQQMAA*FATMTS
Trigger: GGATGTCATGGTGGCAAACAAGGCAGCCATTTGCTG...TCCCCAGGCAGTGTTGGGTCGAGAATCCACTTTTCTAAACCCACACAGCCTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR GCA 72 bp GAACACGGAGGACACACCACCATCAACTGCTCTAAATaGTCCCTTTCTTCACCAAACAAGGGACCTCCCAGC +
Preference number: 3 (lower is better)
Translates to: EHGGHTTINCSK*SLSSPNKGPPS
Trigger: GCTGGGAGGTCCCTTGTTTGGTGAAGAAAGGGAGCATTTAGAGCAGTTGATGGTGGTGTGTCCTCCGTGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR CAA 90 bp ACACACACACACACACACACATCACACACAATTTCTTTGAGGAGAATCATGGGGGGGGTCAGACCTCACTaGACTGCCTGCTCCCTGTGT +
Preference number: 3 (lower is better)
Translates to: THTHTHTSHTISLRRIMGGVRPH*TACSLC
Trigger: ACACAGGGAGCAGGCAGTCAAGTGAGGTCTGACCCC...CCCCATGATTCTCCTCAAAGAAATTGTGTGTGATGTGTGTGTGTGTGTGTGTGT
51% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR TCA 72 bp ACAGAGTGTGCCCTGAGAATCATATGCAGAACAGACTaGAAATGCCTCACACAAGCACGTGGTCAGCTGCCC +
Preference number: 3 (lower is better)
Translates to: TECALRIICRTD*KCLTQARGQLP
Trigger: GGGCAGCTGACCACGTGCTTGTGTGAGGCATTTTCAGTCTGTTCTGCATATGATTCTCAGGGCACACTCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR TCA 72 bp ACACTGAACACACCTGTACAGGCACTGCATCTCCTGTaGCACAGACACACACACACACACACACACACACAC +
Preference number: 3 (lower is better)
Translates to: TLNTPVQALHLL*HRHTHTHTHTH
Trigger: GTGTGTGTGTGTGTGTGTGTGTGTGTGTCTGTGTCACAGGAGATGCAGTGCCTGTACAGGTGTGTTCAGTGT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR GCA 72 bp CTTTCTTCACCAAACAAGGGACCTCCCAGCATCTTGTaGACCTTGGACAGTGTCCTGAGCATGGTCTTTCTC +
Preference number: 3 (lower is better)
Translates to: LSSPNKGPPSIL*TLDSVLSMVFL
Trigger: GAGAAAGACCATGCTCAGGACACTGTCCAAGGTGCACAAGATGCTGGGAGGTCCCTTGTTTGGTGAAGAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR GCA 72 bp TCGACCCAACACTGCCTGGGGAAATGGCTGTGGTTCTaGATGGAATGGACACATTCGACACCCAAGATAACA +
Preference number: 3 (lower is better)
Translates to: STQHCLGKWLWF*MEWTHSTPKIT
Trigger: TGTTATCTTGGGTGTCGAATGTGTCCATTCCATGCAGAACCACAGCCATTTCCCCAGGCAGTGTTGGGTCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR CCA 72 bp GGGTTTAGAAAAGTGGATTCTCGACCCAACACTGCCTaGGGAAATGGCTGTGGTTCTGCATGGAATGGACAC +
Preference number: 3 (lower is better)
Translates to: GFRKVDSRPNTA*GNGCGSAWNGH
Trigger: GTGTCCATTCCATGCAGAACCACAGCCATTTCCCCAGGCAGTGTTGGGTCGAGAATCCACTTTTCTAAACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR CAA 90 bp TCATGGGGTAGAAGCCAAGAATCCAACACAGATCATCTGGAATTTCAGAACACGTGCCCTGTGGCTTCCTaGGAAACCCCTTCCACTCGT +
Preference number: 3 (lower is better)
Translates to: SWGRSQESNTDHLEFQNTCPVAS*ETPSTR
Trigger: ACGAGTGGAAGGGGTTTCCAAGGAAGCCACAGGGCA...CGTGTTCTGAAATTCCAGATGATCTGTGTTGGATTCTTGGCTTCTACCCCATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR CAA 90 bp GGGGTAGAAGCCAAGAATCCAACACAGATCATCTGGAATTTCAGAACACGGAGGCCTTCCTACCAGCCTTaGCCTCTCTTCTGCTGTATG +
Preference number: 3 (lower is better)
Translates to: GVEAKNPTQIIWNFRTRRPSYQP*PLFCCM
Trigger: CATACAGCAGAAGAGAGGCAAAGGCTGGTAGGAAGG...CCTCCGTGTTCTGAAATTCCAGATGATCTGTGTTGGATTCTTGGCTTCTACCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR CAA 90 bp ACACACACACACACACACACATCACACACAATTTCTTTGAGGAGAATCATGGGGGGACCTCCCAGCATCTaGTGCACCTTGGACAGTGTC +
Preference number: 3 (lower is better)
Translates to: THTHTHTSHTISLRRIMGGPPSI*CTLDSV
Trigger: GACACTGTCCAAGGTGCACAAGATGCTGGGAGGTCC...CCCCATGATTCTCCTCAAAGAAATTGTGTGTGATGTGTGTGTGTGTGTGTGTGT
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR CAA 90 bp CAGCAAACTAGTCAATCACAGAATTTCTTTTTAAGTAGGTCCCAGTTGTGTTGCTCCACTGGCAAGGGCTaGCTACCTGGCTGCCATCGC +
Preference number: 3 (lower is better)
Translates to: QQTSQSQNFFLSRSQLCCSTGKG*LPGCHR
Trigger: GCGATGGCAGCCAGGTAGCAAGCCCTTGCCAGTGGA...GCAACACAACTGGGACCTACTTAAAAAGAAATTCTGTGATTGACTAGTTTGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR CAA 90 bp TCATGGGGTAGAAGCCAAGAATCCAACACAGATCATCTGGAATTTCAGAACACGCAGCAAATGGCTGCCTaGTTTGCCACCATGACATCC +
Preference number: 3 (lower is better)
Translates to: SWGRSQESNTDHLEFQNTQQMAA*FATMTS
Trigger: GGATGTCATGGTGGCAAACAAGGCAGCCATTTGCTG...CGTGTTCTGAAATTCCAGATGATCTGTGTTGGATTCTTGGCTTCTACCCCATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR CAA 90 bp ACACACACACACACACACACATCACACACAATTTCTTTGAGGAGAATCATGGGGCCTTCCTACCAGCCTTaGCCTCTCTTCTGCTGTATG +
Preference number: 3 (lower is better)
Translates to: THTHTHTSHTISLRRIMGPSYQP*PLFCCM
Trigger: CATACAGCAGAAGAGAGGCAAAGGCTGGTAGGAAGG...CCCCATGATTCTCCTCAAAGAAATTGTGTGTGATGTGTGTGTGTGTGTGTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR CAA 90 bp ACACACACACACACACACACATCACACACAATTTCTTTGAGGAGAATCATGGGGAGCATCTTGTGCACCTaGGACAGTGTCCTGAGCATG +
Preference number: 3 (lower is better)
Translates to: THTHTHTSHTISLRRIMGSILCT*DSVLSM
Trigger: CATGCTCAGGACACTGTCCAAGGTGCACAAGATGCT...CCCCATGATTCTCCTCAAAGAAATTGTGTGTGATGTGTGTGTGTGTGTGTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR GCA 72 bp GGAATTTCAGAACACGGAGGACACACCACCATCAACTaGTCTAAATGCTCCCTTTCTTCACCAAACAAGGGA +
Preference number: 3 (lower is better)
Translates to: GISEHGGHTTIN*SKCSLSSPNKG
Trigger: TCCCTTGTTTGGTGAAGAAAGGGAGCATTTAGAGCAGTTGATGGTGGTGTGTCCTCCGTGTTCTGAAATTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR GCA 72 bp TGTTCAAACTACAGCCACTGCTTGACTGGTTCCAGATaGAGACAACTGGGTGATGCACTTCAAATTTGGCAG +
Preference number: 3 (lower is better)
Translates to: CSNYSHCLTGSR*RQLGDALQIWQ
Trigger: CTGCCAAATTTGAAGTGCATCACCCAGTTGTCTGCATCTGGAACCAGTCAAGCAGTGGCTGTAGTTTGAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR CCA 72 bp CATGGGGTAGAAGCCAAGAATCCAACACAGATCATCTaGAATTTCAGAACACGGAGGACACACCACCATCAA +
Preference number: 3 (lower is better)
Translates to: HGVEAKNPTQII*NFRTRRTHHHQ
Trigger: TTGATGGTGGTGTGTCCTCCGTGTTCTGAAATTCCAGATGATCTGTGTTGGATTCTTGGCTTCTACCCCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR TCA 72 bp CACACACACACACACACACATCACACACAATTTCTTTaGGGAGAATCATGGGGTAGAAGCCAAGAATCCAAC +
Preference number: 3 (lower is better)
Translates to: HTHTHTHHTQFL*GESWGRSQESN
Trigger: GTTGGATTCTTGGCTTCTACCCCATGATTCTCCTCAAAGAAATTGTGTGTGATGTGTGTGTGTGTGTGTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR TCA 72 bp AACTGGGTGATGCACTTCAAATTTGGCAGCTCACTATaGGATTCAGGGGACATATATGATAGCCGGAGAAGA +
Preference number: 3 (lower is better)
Translates to: NWVMHFKFGSSL*DSGDIYDSRRR
Trigger: TCTTCTCCGGCTATCATATATGTCCCCTGAATCTCATAGTGAGCTGCCAAATTTGAAGTGCATCACCCAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR GCA 72 bp TTACATGCACACATAACTTGTTCAAACTACAGCCACTaGTTGACTGGTTCCAGATGCAGACAACTGGGTGAT +
Preference number: 3 (lower is better)
Translates to: LHAHITCSNYSH*LTGSRCRQLGD
Trigger: ATCACCCAGTTGTCTGCATCTGGAACCAGTCAAGCAGTGGCTGTAGTTTGAACAAGTTATGTGTGCATGTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR CAA 90 bp TCACATGCACAGTCCGAGATTCCTGGTTTATTCTATTGGAATAAAATACTCTGTCCTTCCTACCAGCCTTaGCCTCTCTTCTGCTGTATG +
Preference number: 3 (lower is better)
Translates to: SHAQSEIPGLFYWNKILCPSYQP*PLFCCM
Trigger: CATACAGCAGAAGAGAGGCAAAGGCTGGTAGGAAGG...ACAGAGTATTTTATTCCAATAGAATAAACCAGGAATCTCGGACTGTGCATGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR TCA 72 bp AAATACACATCCTTCTACTTTGCAACAGGAGCACAGTaGTCACATGCACAGTCCGAGATTCCTGGTTTATTC +
Preference number: 3 (lower is better)
Translates to: KYTSFYFATGAQ*SHAQSEIPGLF
Trigger: GAATAAACCAGGAATCTCGGACTGTGCATGTGATCACTGTGCTCCTGTTGCAAAGTAGAAGGATGTGTATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR CAA 90 bp TCACATGCACAGTCCGAGATTCCTGGTTTATTCTATTGGAATAAAATACTCTGTGACCAGGCAGCGGTCTaGTGTGTTTTACTTCTATTA +
Preference number: 3 (lower is better)
Translates to: SHAQSEIPGLFYWNKILCDQAAV*CVLLLL
Trigger: TAATAGAAGTAAAACACACAAGACCGCTGCCTGGTC...ACAGAGTATTTTATTCCAATAGAATAAACCAGGAATCTCGGACTGTGCATGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR-3UTR CAA 90 bp CAGCAAACTAGTCAATCACAGAATTTCTTTTTAAGTAGGTCCCAGTTGTGTTGCACATGCACACATAACTaGTTCAAACTACAGCCACTG +
Preference number: 3 (lower is better)
Translates to: QQTSQSQNFFLSRSQLCCTCTHN*FKLQPL
Trigger: CAGTGGCTGTAGTTTGAACAAGTTATGTGTGCATGT...GCAACACAACTGGGACCTACTTAAAAAGAAATTCTGTGATTGACTAGTTTGCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp CACAGGAGCCTCACCAAGGTGGGCAAGGCCTCCCCCGAGGGCCGGCTGCCCCGTCCTCAGGTCGGGCTTTaGCTCCCACGGGCCCCCGCG +
Preference number: 4 (lower is better)
Translates to: HRSLTKVGKASPEGRLPRPQVGL*LPRAPA
Trigger: CGCGGGGGCCCGTGGGAGGCAAAGCCCGACCTGAGG...ACGGGGCAGCCGGCCCTCGGGGGAGGCCTTGCCCACCTTGGTGAGGCTCCTGTG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp CACAGGAGCCTCACCAAGGTGGGCAAGGCCTCCCCCGAGGGCCGGCTGCCCCGTGGTGCCGGTGGTGCCTaGGCGGAGGGTCGACGCCCT +
Preference number: 4 (lower is better)
Translates to: HRSLTKVGKASPEGRLPRGAGGA*AEGRRP
Trigger: AGGGCGTCGACCCTCCGCGCAGGCACCACCGGCACC...ACGGGGCAGCCGGCCCTCGGGGGAGGCCTTGCCCACCTTGGTGAGGCTCCTGTG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CACAGGAGCCTCACCAAGGTGGGCAAGGCCTCCCCCGAGGGCCGGCTGCCCCGTCGCCTGGCTAGGGGGTaGGCGGTCCGGGGTGGTGCT +
Preference number: 4 (lower is better)
Translates to: HRSLTKVGKASPEGRLPRRLARG*AVRGGA
Trigger: AGCACCACCCCGGACCGCCCACCCCCTAGCCAGGCG...ACGGGGCAGCCGGCCCTCGGGGGAGGCCTTGCCCACCTTGGTGAGGCTCCTGTG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp CACAGGAGCCTCACCAAGGTGGGCAAGGCCTCCCCCGAGGGCCGGCTGCCCCGTCGGAAAGCCCACGGCTaGGCCGGCCTGGGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: HRSLTKVGKASPEGRLPRRKAHG*AGLGRR
Trigger: CCTTCTCCCCAGGCCGGCTCAGCCGTGGGCTTTCCG...ACGGGGCAGCCGGCCCTCGGGGGAGGCCTTGCCCACCTTGGTGAGGCTCCTGTG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CACAGGAGCCTCACCAAGGTGGGCAAGGCCTCCCCCGAGGGCCGGCTGCCCCGTCTCGCACAGCCGGGCTaGGGCCTCCTTGCCACAGGG +
Preference number: 4 (lower is better)
Translates to: HRSLTKVGKASPEGRLPRLAQPG*GLLATG
Trigger: CCCTGTGGCAAGGAGGCCCCAGCCCGGCTGTGCGAG...ACGGGGCAGCCGGCCCTCGGGGGAGGCCTTGCCCACCTTGGTGAGGCTCCTGTG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CACAGGAGCCTCACCAAGGTGGGCAAGGCCTCCCCCGAGGGCCGGCTGCCCCGTGAGGCCGCTCGACCCTaGCTCTCCAGCCCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: HRSLTKVGKASPEGRLPREAARP*LSSPGW
Trigger: CCAGCCTGGGCTGGAGAGCCAGGGTCGAGCGGCCTC...ACGGGGCAGCCGGCCCTCGGGGGAGGCCTTGCCCACCTTGGTGAGGCTCCTGTG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CACAGGAGCCTCACCAAGGTGGGCAAGGCCTCCCCCGAGGGCCGGCTGCCCCGTTGGTGCGACGACGCCTaGCTAGGGGGTGGGCGGTCC +
Preference number: 4 (lower is better)
Translates to: HRSLTKVGKASPEGRLPRWCDDA*LGGGRS
Trigger: GGACCGCCCACCCCCTAGCCAGGCGTCGTCGCACCA...ACGGGGCAGCCGGCCCTCGGGGGAGGCCTTGCCCACCTTGGTGAGGCTCCTGTG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp CACAGGAGCCTCACCAAGGTGGGCAAGGCCTCCCCCGAGGGCCGGCTGCCCCGTCTGTCTTCCCGCTCTTaGGGCTGGCGCGGGCGAAGG +
Preference number: 4 (lower is better)
Translates to: HRSLTKVGKASPEGRLPRLSSRS*GWRGRR
Trigger: CCTTCGCCCGCGCCAGCCTCAAGAGCGGGAAGACAG...ACGGGGCAGCCGGCCCTCGGGGGAGGCCTTGCCCACCTTGGTGAGGCTCCTGTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp CACAGGAGCCTCACCAAGGTGGGCAAGGCCTCCCCCGAGGGCCGGCTGCCCCGTGCAGGGAGGCTGGTCTaGGCCCCGGCGAAGTGGATG +
Preference number: 4 (lower is better)
Translates to: HRSLTKVGKASPEGRLPRAGRLV*APAKWM
Trigger: CATCCACTTCGCCGGGGCTCAGACCAGCCTCCCTGC...ACGGGGCAGCCGGCCCTCGGGGGAGGCCTTGCCCACCTTGGTGAGGCTCCTGTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp CACAGGAGCCTCACCAAGGTGGGCAAGGCCTCCCCCGAGGGCCGGCTGCCCCGTTTGCTCGGATCCTGGTaGCGGTGCGCGCGGTGGCGT +
Preference number: 4 (lower is better)
Translates to: HRSLTKVGKASPEGRLPRLLGSW*RCARWR
Trigger: ACGCCACCGCGCGCACCGGCACCAGGATCCGAGCAA...ACGGGGCAGCCGGCCCTCGGGGGAGGCCTTGCCCACCTTGGTGAGGCTCCTGTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CACAGGAGCCTCACCAAGGTGGGCAAGGCCTCCCCCGAGGGCCGGCTGCCCCGTATGTCGGGCCGCAGGTaGCGCGTAGTGGCGAAGCGC +
Preference number: 4 (lower is better)
Translates to: HRSLTKVGKASPEGRLPRMSGRR*RVVAKR
Trigger: GCGCTTCGCCACTACGCGCCACCTGCGGCCCGACAT...ACGGGGCAGCCGGCCCTCGGGGGAGGCCTTGCCCACCTTGGTGAGGCTCCTGTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp TGGCGCCAGGACAGTGCTGGGCATCAGGTGCCCGGCCTCAGTGGCAGGAGCCGTCGCCTGGCTAGGGGGTaGGCGGTCCGGGGTGGTGCT +
Preference number: 4 (lower is better)
Translates to: WRQDSAGHQVPGLSGRSRRLARG*AVRGGA
Trigger: AGCACCACCCCGGACCGCCCACCCCCTAGCCAGGCG...ACGGCTCCTGCCACTGAGGCCGGGCACCTGATGCCCAGCACTGTCCTGGCGCCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp CACAGGAGCCTCACCAAGGTGGGCAAGGCCTCCCCCGAGGGCCGGCTGCCCCGTGGGCCCGCAGCACACTaGTCCCAAAGGAGCTTCCCG +
Preference number: 4 (lower is better)
Translates to: HRSLTKVGKASPEGRLPRGPAAH*SQRSFP
Trigger: CGGGAAGCTCCTTTGGGATCAGTGTGCTGCGGGCCC...ACGGGGCAGCCGGCCCTCGGGGGAGGCCTTGCCCACCTTGGTGAGGCTCCTGTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp CACAGGAGCCTCACCAAGGTGGGCAAGGCCTCCCCCGAGGGCCGGCTGCCCCGTCCTGGCGGAGCAGCTTaGTCAGCCGCGCAGCTCGAA +
Preference number: 4 (lower is better)
Translates to: HRSLTKVGKASPEGRLPRPGGAA*SAAQLE
Trigger: TTCGAGCTGCGCGGCTGATCAAGCTGCTCCGCCAGG...ACGGGGCAGCCGGCCCTCGGGGGAGGCCTTGCCCACCTTGGTGAGGCTCCTGTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp CACAGGAGCCTCACCAAGGTGGGCAAGGCCTCCCCCGAGGGCCGGCTGCCCCGTCCCCCGTGGCGCTCCTaGACAGCAGCATCAGGGCTT +
Preference number: 4 (lower is better)
Translates to: HRSLTKVGKASPEGRLPRPPWRS*TAASGL
Trigger: AAGCCCTGATGCTGCTGTTCAGGAGCGCCACGGGGG...ACGGGGCAGCCGGCCCTCGGGGGAGGCCTTGCCCACCTTGGTGAGGCTCCTGTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp TGGCGCCAGGACAGTGCTGGGCATCAGGTGCCCGGCCTCAGTGGCAGGAGCCGTCGGAAAGCCCACGGCTaGGCCGGCCTGGGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: WRQDSAGHQVPGLSGRSRRKAHG*AGLGRR
Trigger: CCTTCTCCCCAGGCCGGCTCAGCCGTGGGCTTTCCG...ACGGCTCCTGCCACTGAGGCCGGGCACCTGATGCCCAGCACTGTCCTGGCGCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CACAGGAGCCTCACCAAGGTGGGCAAGGCCTCCCCCGAGGGCCGGCTGCCCCGTGGGATCTCTGTGGAGTaGCCACGCTCCAGGGGTGGC +
Preference number: 4 (lower is better)
Translates to: HRSLTKVGKASPEGRLPRGISVE*PRSRGG
Trigger: GCCACCCCTGGAGCGTGGCCACTCCACAGAGATCCC...ACGGGGCAGCCGGCCCTCGGGGGAGGCCTTGCCCACCTTGGTGAGGCTCCTGTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp TGGCGCCAGGACAGTGCTGGGCATCAGGTGCCCGGCCTCAGTGGCAGGAGCCGTGAGGCCGCTCGACCCTaGCTCTCCAGCCCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: WRQDSAGHQVPGLSGRSREAARP*LSSPGW
Trigger: CCAGCCTGGGCTGGAGAGCCAGGGTCGAGCGGCCTC...ACGGCTCCTGCCACTGAGGCCGGGCACCTGATGCCCAGCACTGTCCTGGCGCCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGCGCCTGGCTAGGGGGTaGGCGGTCCGGGGTGGTGCT +
Preference number: 4 (lower is better)
Translates to: EVSAHFQVGPASLCRTATRLARG*AVRGGA
Trigger: AGCACCACCCCGGACCGCCCACCCCCTAGCCAGGCG...CGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CACAGGAGCCTCACCAAGGTGGGCAAGGCCTCCCCCGAGGGCCGGCTGCCCCGTAGGAGCGGCCCGAGTTaGTGGCCACAGCCTCCTCGA +
Preference number: 4 (lower is better)
Translates to: HRSLTKVGKASPEGRLPRRSGPS*WPQPPR
Trigger: TCGAGGAGGCTGTGGCCACCAACTCGGGCCGCTCCT...ACGGGGCAGCCGGCCCTCGGGGGAGGCCTTGCCCACCTTGGTGAGGCTCCTGTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CACAGGAGCCTCACCAAGGTGGGCAAGGCCTCCCCCGAGGGCCGGCTGCCCCGTCCTGCTCCCTGTGTCTaGCGCCAGGACAGTGCTGGG +
Preference number: 4 (lower is better)
Translates to: HRSLTKVGKASPEGRLPRPAPCV*RQDSAG
Trigger: CCCAGCACTGTCCTGGCGCCAGACACAGGGAGCAGG...ACGGGGCAGCCGGCCCTCGGGGGAGGCCTTGCCCACCTTGGTGAGGCTCCTGTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp CACAGGAGCCTCACCAAGGTGGGCAAGGCCTCCCCCGAGGGCCGGCTGCCCCGTTCTCGCTCGATCTGCTaGTGCCGGCGCAGCTTCAGG +
Preference number: 4 (lower is better)
Translates to: HRSLTKVGKASPEGRLPRSRSIC*CRRSFR
Trigger: CCTGAAGCTGCGCCGGCAGCAGCAGATCGAGCGAGA...ACGGGGCAGCCGGCCCTCGGGGGAGGCCTTGCCCACCTTGGTGAGGCTCCTGTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp CACAGGAGCCTCACCAAGGTGGGCAAGGCCTCCCCCGAGGGCCGGCTGCCCCGTGGTCCGGGGTGGTGCTaGAAAGATGAGTCCCACGGG +
Preference number: 4 (lower is better)
Translates to: HRSLTKVGKASPEGRLPRGPGWC*KDESHG
Trigger: CCCGTGGGACTCATCTTTGCAGCACCACCCCGGACC...ACGGGGCAGCCGGCCCTCGGGGGAGGCCTTGCCCACCTTGGTGAGGCTCCTGTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp CACAGGAGCCTCACCAAGGTGGGCAAGGCCTCCCCCGAGGGCCGGCTGCCCCGTCCCCCGAGGGCCGGCTaGCCCGTGTGGATGATAAAA +
Preference number: 4 (lower is better)
Translates to: HRSLTKVGKASPEGRLPRPPRAG*PVWMIK
Trigger: TTTTATCATCCACACGGGGCAGCCGGCCCTCGGGGG...ACGGGGCAGCCGGCCCTCGGGGGAGGCCTTGCCCACCTTGGTGAGGCTCCTGTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CACAGGAGCCTCACCAAGGTGGGCAAGGCCTCCCCCGAGGGCCGGCTGCCCCGTGACACAGGACCCATCTaGGAGAGGCCTCCAGGAGCC +
Preference number: 4 (lower is better)
Translates to: HRSLTKVGKASPEGRLPRDTGPI*ERPPGA
Trigger: GGCTCCTGGAGGCCTCTCCCAGATGGGTCCTGTGTC...ACGGGGCAGCCGGCCCTCGGGGGAGGCCTTGCCCACCTTGGTGAGGCTCCTGTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CACAGGAGCCTCACCAAGGTGGGCAAGGCCTCCCCCGAGGGCCGGCTGCCCCGTGGTGGCCTGGCCTCATaGGGTGCATCCTGGGTCCTT +
Preference number: 4 (lower is better)
Translates to: HRSLTKVGKASPEGRLPRGGLAS*GASWVL
Trigger: AAGGACCCAGGATGCACCCCATGAGGCCAGGCCACC...ACGGGGCAGCCGGCCCTCGGGGGAGGCCTTGCCCACCTTGGTGAGGCTCCTGTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGGAGGCCGCTCGACCCTaGCTCTCCAGCCCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: EVSAHFQVGPASLCRTATEAARP*LSSPGW
Trigger: CCAGCCTGGGCTGGAGAGCCAGGGTCGAGCGGCCTC...CGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGGTCCCACGGGGCCGCTaGGCCAGCGTGGAGATGGAG +
Preference number: 4 (lower is better)
Translates to: EVSAHFQVGPASLCRTATVPRGR*ASVEME
Trigger: CTCCATCTCCACGCTGGCCCAGCGGCCCCGTGGGAC...CGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp TCGGCCACCCGAGCTGAGTCCCAGGGTGCAGTGGTAACCGTTGGGCACGCGGCGTGGCAGCGGTGGTGGTaGTGGTGCGACGACGCCTGG +
Preference number: 4 (lower is better)
Translates to: SATRAESQGAVVTVGHAAWQRWW*WCDDAW
Trigger: CCAGGCGTCGTCGCACCACCACCACCACCGCTGCCA...CGCCGCGTGCCCAACGGTTACCACTGCACCCTGGGACTCAGCTCGGGTGGCCGA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp ACCCGAGCTGAGTCCCAGGGTGCAGTGGTAACCGTTGGGCACGCGGCGGAGAGGCGGTGGCAGCGGTGGTaGTGGTGGTGCGACGACGCC +
Preference number: 4 (lower is better)
Translates to: TRAESQGAVVTVGHAAERRWQRW*WWCDDA
Trigger: GGCGTCGTCGCACCACCACCACCACCGCTGCCACCG...CCTCTCCGCCGCGTGCCCAACGGTTACCACTGCACCCTGGGACTCAGCTCGGGT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp GCACCAGTGGTCTTGGTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGCCACCCGAGAGCCGGCCTGTGGGTaGGGTCCCGGCTCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: APVVLVRVVVAVPCSATREPACG*GPGSWP
Trigger: TGGCCAGGAGCCGGGACCCCACCCACAGGCCGGCTC...TCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGACCAAGACCACTGGTGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp CACAGGAGCCTCACCAAGGTGGGCAAGGCCTCCCCCGAGGGCCGGCTGCCCCGTTCCTCAGGCAGGGCGTaGACAGAGGCCTCACTGTCC +
Preference number: 4 (lower is better)
Translates to: HRSLTKVGKASPEGRLPRSSGRA*TEASLS
Trigger: GGACAGTGAGGCCTCTGTCCACGCCCTGCCTGAGGA...ACGGGGCAGCCGGCCCTCGGGGGAGGCCTTGCCCACCTTGGTGAGGCTCCTGTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp TGGCGCCAGGACAGTGCTGGGCATCAGGTGCCCGGCCTCAGTGGCAGGAGCCGTGGGCCCGCAGCACACTaGTCCCAAAGGAGCTTCCCG +
Preference number: 4 (lower is better)
Translates to: WRQDSAGHQVPGLSGRSRGPAAH*SQRSFP
Trigger: CGGGAAGCTCCTTTGGGATCAGTGTGCTGCGGGCCC...ACGGCTCCTGCCACTGAGGCCGGGCACCTGATGCCCAGCACTGTCCTGGCGCCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp TGGCGCCAGGACAGTGCTGGGCATCAGGTGCCCGGCCTCAGTGGCAGGAGCCGTCCCCCGTGGCGCTCCTaGACAGCAGCATCAGGGCTT +
Preference number: 4 (lower is better)
Translates to: WRQDSAGHQVPGLSGRSRPPWRS*TAASGL
Trigger: AAGCCCTGATGCTGCTGTTCAGGAGCGCCACGGGGG...ACGGCTCCTGCCACTGAGGCCGGGCACCTGATGCCCAGCACTGTCCTGGCGCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp TGGCGCCAGGACAGTGCTGGGCATCAGGTGCCCGGCCTCAGTGGCAGGAGCCGTACGTTGGGTGGCTGCTaGGGGAGGGCTTGGGCTTCG +
Preference number: 4 (lower is better)
Translates to: WRQDSAGHQVPGLSGRSRTLGGC*GRAWAS
Trigger: CGAAGCCCAAGCCCTCCCTCAGCAGCCACCCAACGT...ACGGCTCCTGCCACTGAGGCCGGGCACCTGATGCCCAGCACTGTCCTGGCGCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp CACAGGAGCCTCACCAAGGTGGGCAAGGCCTCCCCCGAGGGCCGGCTGCCCCGTCAGCCTCCTCGAAAGTaGGAGTGTCCTCAGGCAGGG +
Preference number: 4 (lower is better)
Translates to: HRSLTKVGKASPEGRLPRQPPRK*ECPQAG
Trigger: CCCTGCCTGAGGACACTCTCACTTTCGAGGAGGCTG...ACGGGGCAGCCGGCCCTCGGGGGAGGCCTTGCCCACCTTGGTGAGGCTCCTGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGGCAGGGAGGCTGGTCTaGGCCCCGGCGAAGTGGATG +
Preference number: 4 (lower is better)
Translates to: EVSAHFQVGPASLCRTATAGRLV*APAKWM
Trigger: CATCCACTTCGCCGGGGCTCAGACCAGCCTCCCTGC...CGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp AGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGTCGGAAAGCCCACGGCTaGGCCGGCCTGGGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: RSRRTFRWALLLCAARPRRKAHG*AGLGRR
Trigger: CCTTCTCCCCAGGCCGGCTCAGCCGTGGGCTTTCCG...ACGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGTGCCGCACGGCCACGTaGAGGGTGCTCCCCACAGGA +
Preference number: 4 (lower is better)
Translates to: EVSAHFQVGPASLCRTATCRTAT*RVLPTG
Trigger: TCCTGTGGGGAGCACCCTTCACGTGGCCGTGCGGCA...CGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GCCCGGCCTCAGTGGCAGGAGCCGTGTCCTCCCTCGGTCACTTGCTCTGAGTTTAGCTGGCTGGCCCGCTaGTCCCACACCGAGCGCGCC +
Preference number: 4 (lower is better)
Translates to: ARPQWQEPCPPSVTCSEFSWLAR*SHTERA
Trigger: GGCGCGCTCGGTGTGGGAGCAGCGGGCCAGCCAGCT...AAACTCAGAGCAAGTGACCGAGGGAGGACACGGCTCCTGCCACTGAGGCCGGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp CCACGTGAAGGGTGCTCCCCACAGGACGCAGAGCTCCTCACAACGGCTCCAAGCCCTCAGGTCGGGCTTTaGCTCCCACGGGCCCCCGCG +
Preference number: 4 (lower is better)
Translates to: PREGCSPQDAELLTTAPSPQVGL*LPRAPA
Trigger: CGCGGGGGCCCGTGGGAGGCAAAGCCCGACCTGAGG...GCTTGGAGCCGTTGTGAGGAGCTCTGCGTCCTGTGGGGAGCACCCTTCACGTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp CCACGTGAAGGGTGCTCCCCACAGGACGCAGAGCTCCTCACAACGGCTCCAAGCTCGCGGTGCCGGTGGTaGCTGCGCGGAGGGTCGACG +
Preference number: 4 (lower is better)
Translates to: PREGCSPQDAELLTTAPSSRCRW*LRGGST
Trigger: CGTCGACCCTCCGCGCAGGCACCACCGGCACCGCGA...GCTTGGAGCCGTTGTGAGGAGCTCTGCGTCCTGTGGGGAGCACCCTTCACGTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp TCGGCCACCCGAGCTGAGTCCCAGGGTGCAGTGGTAACCGTTGGGCACGCGGCGTTGTCCTTGTCGCGGTaGCGGTGGTGCCTGCGCGGA +
Preference number: 4 (lower is better)
Translates to: SATRAESQGAVVTVGHAALSLSR*RWCLRG
Trigger: TCCGCGCAGGCACCACCGGCACCGCGACAAGGACAA...CGCCGCGTGCCCAACGGTTACCACTGCACCCTGGGACTCAGCTCGGGTGGCCGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR GCA 90 bp ACGCCTGCTGCATGCAGGCGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTCGCCTTCGGGGCCTCTaGTCGGTCCTGGTCCCCCGC +
Preference number: 4 (lower is better)
Translates to: TPAACRRLSGHGAASTSGRLRGL*SVLVPR
Trigger: GCGGGGGACCAGGACCGAGCAGAGGCCCCGAAGGCG...ACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACGCCTGCATGCAGCAGGCGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR GCA 90 bp GAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGTTGCTCGGATCCTGGTaGCGGTGCGCGCGGTGGCGT +
Preference number: 4 (lower is better)
Translates to: EVSAHFQVGPASLCRTATLLGSW*RCARWR
Trigger: ACGCCACCGCGCGCACCGGCACCAGGATCCGAGCAA...CGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp CCCCTCCGTCCCGAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCCGGCGCACTCCTTaGTCGGATCCTGGTGCCGGT +
Preference number: 4 (lower is better)
Translates to: PLRPEVSAHFQVGPASLCRRRTP*SDPGAG
Trigger: ACCGGCACCAGGATCCGAGCAAGGAGTGCGCCGGCG...GCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTCGGGACGGAGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp ACCCGAGCTGAGTCCCAGGGTGCAGTGGTAACCGTTGGGCACGCGGCGGAGAGGCGGTGGTGGTGGTGGTaGGACGACGCCTGGCTAGGG +
Preference number: 4 (lower is better)
Translates to: TRAESQGAVVTVGHAAERRWWWW*DDAWLG
Trigger: CCCTAGCCAGGCGTCGTCGCACCACCACCACCACCG...CCTCTCCGCCGCGTGCCCAACGGTTACCACTGCACCCTGGGACTCAGCTCGGGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR GCA 90 bp ACCCGAGCTGAGTCCCAGGGTGCAGTGGTAACCGTTGGGCACGCGGCGGAGAGGGAGGAGGATGAGGGCTaGCTCCGCTCCTGGGACCGG +
Preference number: 4 (lower is better)
Translates to: TRAESQGAVVTVGHAAEREEDEG*LRSWDR
Trigger: CCGGTCCCAGGAGCGGAGGCAGCCCTCATCCTCCTC...CCTCTCCGCCGCGTGCCCAACGGTTACCACTGCACCCTGGGACTCAGCTCGGGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR GCA 90 bp CACAGGAGCCTCACCAAGGTGGGCAAGGCCTCCCCCGAGGGCCGGCTGCCCCGTCCTCACTTGACTGCCTaGTCCCTGTGTCTGGCGCCA +
Preference number: 4 (lower is better)
Translates to: HRSLTKVGKASPEGRLPRPHLTA*SLCLAP
Trigger: TGGCGCCAGACACAGGGAGCAGGCAGTCAAGTGAGG...ACGGGGCAGCCGGCCCTCGGGGGAGGCCTTGCCCACCTTGGTGAGGCTCCTGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GCTGAGTCCCAGGGTGCAGTGGTAACCGTTGGGCACGCGGCGGAGAGGGTGAGACTCGCACAGCCGGGCTaGGGCCTCCTTGCCACAGGG +
Preference number: 4 (lower is better)
Translates to: AESQGAVVTVGHAAERVRLAQPG*GLLATG
Trigger: CCCTGTGGCAAGGAGGCCCCAGCCCGGCTGTGCGAG...TCTCACCCTCTCCGCCGCGTGCCCAACGGTTACCACTGCACCCTGGGACTCAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp TTGGTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGCCACCCGAGCTGAGTCCCAGGCAGCCGTAGCTGGCTaGCCCGCTGCTCCCACACCG +
Preference number: 4 (lower is better)
Translates to: LVRVVVAVPCSATRAESQAAVAG*PAAPTP
Trigger: CGGTGTGGGAGCAGCGGGCCAGCCAGCTACGGCTGC...CTGGGACTCAGCTCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGACCAA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp GCACCAGTGGTCTTGGTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGCCACCCGATTGTCGCGGTGCCGGTaGTGCCTGCGCGGAGGGTCG +
Preference number: 4 (lower is better)
Translates to: APVVLVRVVVAVPCSATRLSRCR*CLRGGS
Trigger: CGACCCTCCGCGCAGGCACCACCGGCACCGCGACAA...TCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGACCAAGACCACTGGTGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp AGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGTTTGTCGCGGTGCCGGTaGTGCCTGCGCGGAGGGTCG +
Preference number: 4 (lower is better)
Translates to: RSRRTFRWALLLCAARPRLSRCR*CLRGGS
Trigger: CGACCCTCCGCGCAGGCACCACCGGCACCGCGACAA...ACGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGCCACCCGAGCTGAGTCCCAGGGTTCCTTGCTCGGATCCTaGTGCCGGTGCGCGCGGTGG +
Preference number: 4 (lower is better)
Translates to: VRVVVAVPCSATRAESQGSLLGS*CRCARW
Trigger: CCACCGCGCGCACCGGCACCAGGATCCGAGCAAGGA...ACCCTGGGACTCAGCTCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp GAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGTCCTTGCTCGGATCCTaGTGCCGGTGCGCGCGGTGG +
Preference number: 4 (lower is better)
Translates to: EVSAHFQVGPASLCRTATSLLGS*CRCARW
Trigger: CCACCGCGCGCACCGGCACCAGGATCCGAGCAAGGA...CGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp TGGCGCCAGGACAGTGCTGGGCATCAGGTGCCCGGCCTCAGTGGCAGGAGCCGTCACTGGGAACGACCGTaGCTTCCCCAAGAGGGCCCG +
Preference number: 4 (lower is better)
Translates to: WRQDSAGHQVPGLSGRSRHWERP*LPQEGP
Trigger: CGGGCCCTCTTGGGGAAGCCACGGTCGTTCCCAGTG...ACGGCTCCTGCCACTGAGGCCGGGCACCTGATGCCCAGCACTGTCCTGGCGCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CACAGGAGCCTCACCAAGGTGGGCAAGGCCTCCCCCGAGGGCCGGCTGCCCCGTGGTCCACGTTACCACTaGGAACGACCGTGGCTTCCC +
Preference number: 4 (lower is better)
Translates to: HRSLTKVGKASPEGRLPRGPRYH*ERPWLP
Trigger: GGGAAGCCACGGTCGTTCCCAGTGGTAACGTGGACC...ACGGGGCAGCCGGCCCTCGGGGGAGGCCTTGCCCACCTTGGTGAGGCTCCTGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CACAGGAGCCTCACCAAGGTGGGCAAGGCCTCCCCCGAGGGCCGGCTGCCCCGTGAACATGGAGCTGTATaGGACGATAGGCCGGGGGCC +
Preference number: 4 (lower is better)
Translates to: HRSLTKVGKASPEGRLPREHGAV*DDRPGA
Trigger: GGCCCCCGGCCTATCGTCCCATACAGCTCCATGTTC...ACGGGGCAGCCGGCCCTCGGGGGAGGCCTTGCCCACCTTGGTGAGGCTCCTGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp TGGCGCCAGGACAGTGCTGGGCATCAGGTGCCCGGCCTCAGTGGCAGGAGCCGTCGAGTCTGTGCGCACTaGGTCCTCAGCAGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: WRQDSAGHQVPGLSGRSRRVCAH*VLSSQG
Trigger: GCCCTGGCTGCTGAGGACCCAGTGCGCACAGACTCG...ACGGCTCCTGCCACTGAGGCCGGGCACCTGATGCCCAGCACTGTCCTGGCGCCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CACAGGAGCCTCACCAAGGTGGGCAAGGCCTCCCCCGAGGGCCGGCTGCCCCGTGTGGCCTTCAGAGGGTaGAACAGGGACACAGGACCC +
Preference number: 4 (lower is better)
Translates to: HRSLTKVGKASPEGRLPRVAFRG*NRDTGP
Trigger: GGGTCCTGTGTCCCTGTTCCACCCTCTGAAGGCCAC...ACGGGGCAGCCGGCCCTCGGGGGAGGCCTTGCCCACCTTGGTGAGGCTCCTGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp TGGCGCCAGGACAGTGCTGGGCATCAGGTGCCCGGCCTCAGTGGCAGGAGCCGTGCTCCAGGGGTGGCCTaGCCTCATGGGGTGCATCCT +
Preference number: 4 (lower is better)
Translates to: WRQDSAGHQVPGLSGRSRAPGVA*PHGVHP
Trigger: AGGATGCACCCCATGAGGCCAGGCCACCCCTGGAGC...ACGGCTCCTGCCACTGAGGCCGGGCACCTGATGCCCAGCACTGTCCTGGCGCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GCACCAGTGGTCTTGGTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGCCACCCGAGCCACGCTCCAGGGGTaGCCTGGCCTCATGGGGTGC +
Preference number: 4 (lower is better)
Translates to: APVVLVRVVVAVPCSATRATLQG*PGLMGC
Trigger: GCACCCCATGAGGCCAGGCCACCCCTGGAGCGTGGC...TCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGACCAAGACCACTGGTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp GTCTTGGTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGCCACCCGAGCTGAGTCCGAGGCCGCTCGACCCTaGCTCTCCAGCCCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: VLVRVVVAVPCSATRAESEAARP*LSSPGW
Trigger: CCAGCCTGGGCTGGAGAGCCAGGGTCGAGCGGCCTC...GGACTCAGCTCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGACCAAGAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp TGGCGCCAGGACAGTGCTGGGCATCAGGTGCCCGGCCTCAGTGGCAGGAGCCGTGCCGCTGGGCCAGCGTaGAGATGGAGCGCTTCATGG +
Preference number: 4 (lower is better)
Translates to: WRQDSAGHQVPGLSGRSRAAGPA*RWSASW
Trigger: CCATGAAGCGCTCCATCTCCACGCTGGCCCAGCGGC...ACGGCTCCTGCCACTGAGGCCGGGCACCTGATGCCCAGCACTGTCCTGGCGCCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GCTGAGTCCCAGGGTGCAGTGGTAACCGTTGGGCACGCGGCGGAGAGGGTGAGAGTCCCACGGGGCCGCTaGGCCAGCGTGGAGATGGAG +
Preference number: 4 (lower is better)
Translates to: AESQGAVVTVGHAAERVRVPRGR*ASVEME
Trigger: CTCCATCTCCACGCTGGCCCAGCGGCCCCGTGGGAC...TCTCACCCTCTCCGCCGCGTGCCCAACGGTTACCACTGCACCCTGGGACTCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp GCACCAGTGGTCTTGGTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGCCACCCGATGGTGCGACGACGCCTaGCTAGGGGGTGGGCGGTCC +
Preference number: 4 (lower is better)
Translates to: APVVLVRVVVAVPCSATRWCDDA*LGGGRS
Trigger: GGACCGCCCACCCCCTAGCCAGGCGTCGTCGCACCA...TCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGACCAAGACCACTGGTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR TCA 90 bp CACAGGAGCCTCACCAAGGTGGGCAAGGCCTCCCCCGAGGGCCGGCTGCCCCGTACTCCAGGTACCCGTTaGGCTCTCGCTCGATCTGCT +
Preference number: 4 (lower is better)
Translates to: HRSLTKVGKASPEGRLPRTPGTR*ALARSA
Trigger: AGCAGATCGAGCGAGAGCTCAACGGGTACCTGGAGT...ACGGGGCAGCCGGCCCTCGGGGGAGGCCTTGCCCACCTTGGTGAGGCTCCTGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp AGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGTCTGTCTTCCCGCTCTTaGGGCTGGCGCGGGCGAAGG +
Preference number: 4 (lower is better)
Translates to: RSRRTFRWALLLCAARPRLSSRS*GWRGRR
Trigger: CCTTCGCCCGCGCCAGCCTCAAGAGCGGGAAGACAG...ACGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp CCCCTCCGTCCCGAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCGGGCCCGCAGCACACTaGTCCCAAAGGAGCTTCCCG +
Preference number: 4 (lower is better)
Translates to: PLRPEVSAHFQVGPASLCGPAAH*SQRSFP
Trigger: CGGGAAGCTCCTTTGGGATCAGTGTGCTGCGGGCCC...GCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTCGGGACGGAGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp CACAGGAGCCTCACCAAGGTGGGCAAGGCCTCCCCCGAGGGCCGGCTGCCCCGTGACTGCCCATGCGAGTaGCGTTCCGCTGATTGTCTG +
Preference number: 4 (lower is better)
Translates to: HRSLTKVGKASPEGRLPRDCPCE*RSADCL
Trigger: CAGACAATCAGCGGAACGTCACTCGCATGGGCAGTC...ACGGGGCAGCCGGCCCTCGGGGGAGGCCTTGCCCACCTTGGTGAGGCTCCTGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGCCACCCGAGCTGAGTCCCAGGGTTTCGGGTCTGGGGGCTaGCTGCCCATGCGAGTGACG +
Preference number: 4 (lower is better)
Translates to: VRVVVAVPCSATRAESQGFGSGG*LPMRVT
Trigger: CGTCACTCGCATGGGCAGTCAGCCCCCAGACCCGAA...ACCCTGGGACTCAGCTCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR TCA 90 bp CCCCTCCGTCCCGAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCCCCCGTGGCGCTCCTaGACAGCAGCATCAGGGCTT +
Preference number: 4 (lower is better)
Translates to: PLRPEVSAHFQVGPASLCPPWRS*TAASGL
Trigger: AAGCCCTGATGCTGCTGTTCAGGAGCGCCACGGGGG...GCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTCGGGACGGAGGGG
68% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGCCACCCGAGCTGAGTCCCAGGGTCAGCTGGGGCCAGCTTaGTCTCCAGTGCCGTCCGGA +
Preference number: 4 (lower is better)
Translates to: VRVVVAVPCSATRAESQGQLGPA*SPVPSG
Trigger: TCCGGACGGCACTGGAGATCAAGCTGGCCCCAGCTG...ACCCTGGGACTCAGCTCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR TCA 90 bp GTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGCCACCCGAGCTGAGTCCCAGGGTCACAGCCAGTGCTCCTaGCCGCCCCACAGGGATCTC +
Preference number: 4 (lower is better)
Translates to: VRVVVAVPCSATRAESQGHSQCS*PPHRDL
Trigger: GAGATCCCTGTGGGGCGGTCAGGAGCACTGGCTGTG...ACCCTGGGACTCAGCTCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR TCA 90 bp CCCCTCCGTCCCGAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCACGTTGGGTGGCTGCTaGGGGAGGGCTTGGGCTTCG +
Preference number: 4 (lower is better)
Translates to: PLRPEVSAHFQVGPASLCTLGGC*GRAWAS
Trigger: CGAAGCCCAAGCCCTCCCTCAGCAGCCACCCAACGT...GCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTCGGGACGGAGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp AGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGTACGCGGCGGAGAGGGTaGGACTGGGAGGTCAGGGAG +
Preference number: 4 (lower is better)
Translates to: RSRRTFRWALLLCAARPRTRRRG*DWEVRE
Trigger: CTCCCTGACCTCCCAGTCTCACCCTCTCCGCCGCGT...ACGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp TTGGTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGCCACCCGAGCTGAGTCCCAGCTCGGCCACCCGAGCTaGGTCCCAGGGTGCAGTGGT +
Preference number: 4 (lower is better)
Translates to: LVRVVVAVPCSATRAESQLGHPS*VPGCSG
Trigger: ACCACTGCACCCTGGGACTCAGCTCGGGTGGCCGAG...CTGGGACTCAGCTCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGACCAA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR TCA 90 bp AGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGTCTCGGCCACCCGAGCTaGGTCCCAGGGTGCAGTGGT +
Preference number: 4 (lower is better)
Translates to: RSRRTFRWALLLCAARPRLGHPS*VPGCSG
Trigger: ACCACTGCACCCTGGGACTCAGCTCGGGTGGCCGAG...ACGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GCCCGGCCTCAGTGGCAGGAGCCGTGTCCTCCCTCGGTCACTTGCTCTGAGTTTCCAGGAGCCTGGGTGTaGGGGCCTGGCGGTCAGGCA +
Preference number: 4 (lower is better)
Translates to: ARPQWQEPCPPSVTCSEFPGAWV*GPGGQA
Trigger: TGCCTGACCGCCAGGCCCTCACACCCAGGCTCCTGG...AAACTCAGAGCAAGTGACCGAGGGAGGACACGGCTCCTGCCACTGAGGCCGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp CCCCTCCGTCCCGAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCACAGCATCCTGCGGTaGTGGATCCCGAGGCCTCGC +
Preference number: 4 (lower is better)
Translates to: PLRPEVSAHFQVGPASLCHSILR*WIPRPR
Trigger: GCGAGGCCTCGGGATCCATCACCGCAGGATGCTGTG...GCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTCGGGACGGAGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCCCTTCCACTCGTGGGAGGAGGAGCTGGCTGGCCCGCTaGTCCCACACCGAGCGCGCC +
Preference number: 4 (lower is better)
Translates to: VVSCPVASLETPSTRGRRSWLAR*SHTERA
Trigger: GGCGCGCTCGGTGTGGGAGCAGCGGGCCAGCCAGCT...CCTCCTCCCACGAGTGGAAGGGGTTTCCAAGGAAGCCACAGGGCAGCTGACCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GCTGTGCCGTGCTCGGCCACCCGAGCTGAGTCCCAGGGTGCAGTGGTAACCGTTCTGGCCCGCAGGTTCTaGAGCCGTAGCTGGCTGGCC +
Preference number: 4 (lower is better)
Translates to: AVPCSATRAESQGAVVTVLARRF*SRSWLA
Trigger: GGCCAGCCAGCTACGGCTGCAGAACCTGCGGGCCAG...AACGGTTACCACTGCACCCTGGGACTCAGCTCGGGTGGCCGAGCACGGCACAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR GCA 90 bp AGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGTCTGGCCCGCAGGTTCTaGAGCCGTAGCTGGCTGGCC +
Preference number: 4 (lower is better)
Translates to: RSRRTFRWALLLCAARPRLARRF*SRSWLA
Trigger: GGCCAGCCAGCTACGGCTGCAGAACCTGCGGGCCAG...ACGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GCGGTCACGGTGCAGCTAGCACCAGTGGTCTTGGTCAGGGTGGTGGTAGCTGTGGGTGCCGGTGGTGCCTaGGCGGAGGGTCGACGCCCT +
Preference number: 4 (lower is better)
Translates to: AVTVQLAPVVLVRVVVAVGAGGA*AEGRRP
Trigger: AGGGCGTCGACCCTCCGCGCAGGCACCACCGGCACC...CACAGCTACCACCACCCTGACCAAGACCACTGGTGCTAGCTGCACCGTGACCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR GCA 90 bp CGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTCTTGGTCAGGGTGGTGGTTCGCGGTGCCGGTGGTaGCTGCGCGGAGGGTCGACG +
Preference number: 4 (lower is better)
Translates to: RLSGHGAASTSGLGQGGGSRCRW*LRGGST
Trigger: CGTCGACCCTCCGCGCAGGCACCACCGGCACCGCGA...ACCACCACCCTGACCAAGACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR GCA 90 bp CCTGCTGCATGCAGGCGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTCTTCGCCTTCGGGGCCTCTaGTCGGTCCTGGTCCCCCGC +
Preference number: 4 (lower is better)
Translates to: PAACRRLSGHGAASTSGLRLRGL*SVLVPR
Trigger: GCGGGGGACCAGGACCGAGCAGAGGCCCCGAAGGCG...AAGACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACGCCTGCATGCAGCAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR GCA 90 bp TCGGCCACCCGAGCTGAGTCCCAGGGTGCAGTGGTAACCGTTGGGCACGCGGCGCACACGCCTGCTGCATaGAGGCGTCTGAGCGGTCAC +
Preference number: 4 (lower is better)
Translates to: SATRAESQGAVVTVGHAAHTPAA*RRLSGH
Trigger: GTGACCGCTCAGACGCCTGCATGCAGCAGGCGTGTG...CGCCGCGTGCCCAACGGTTACCACTGCACCCTGGGACTCAGCTCGGGTGGCCGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR GCA 90 bp AGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGTCTGGCGCCAGGACAGTaGTGGGCATCAGGTGCCCGG +
Preference number: 4 (lower is better)
Translates to: RSRRTFRWALLLCAARPRLAPGQ*WASGAR
Trigger: CCGGGCACCTGATGCCCAGCACTGTCCTGGCGCCAG...ACGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp ACCCGAGCTGAGTCCCAGGGTGCAGTGGTAACCGTTGGGCACGCGGCGGAGAGGACACCGAGCGCGCCTTaGCCGAGTTCTGCTGCCTGG +
Preference number: 4 (lower is better)
Translates to: TRAESQGAVVTVGHAAERTPSAP*PSSAAW
Trigger: CCAGGCAGCAGAACTCGGCCAAGGCGCGCTCGGTGT...CCTCTCCGCCGCGTGCCCAACGGTTACCACTGCACCCTGGGACTCAGCTCGGGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp CCACGTGAAGGGTGCTCCCCACAGGACGCAGAGCTCCTCACAACGGCTCCAAGCGCAGCCGTAGCTGGCTaGCCCGCTGCTCCCACACCG +
Preference number: 4 (lower is better)
Translates to: PREGCSPQDAELLTTAPSAAVAG*PAAPTP
Trigger: CGGTGTGGGAGCAGCGGGCCAGCCAGCTACGGCTGC...GCTTGGAGCCGTTGTGAGGAGCTCTGCGTCCTGTGGGGAGCACCCTTCACGTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GCTGAGTCCCAGGGTGCAGTGGTAACCGTTGGGCACGCGGCGGAGAGGGTGAGAATGTCGGGCCGCAGGTaGCGCGTAGTGGCGAAGCGC +
Preference number: 4 (lower is better)
Translates to: AESQGAVVTVGHAAERVRMSGRR*RVVAKR
Trigger: GCGCTTCGCCACTACGCGCCACCTGCGGCCCGACAT...TCTCACCCTCTCCGCCGCGTGCCCAACGGTTACCACTGCACCCTGGGACTCAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp GCACCAGTGGTCTTGGTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGCCACCCGATCCTTGCTCGGATCCTaGTGCCGGTGCGCGCGGTGG +
Preference number: 4 (lower is better)
Translates to: APVVLVRVVVAVPCSATRSLLGS*CRCARW
Trigger: CCACCGCGCGCACCGGCACCAGGATCCGAGCAAGGA...TCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGACCAAGACCACTGGTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp CGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTCTTGGTCAGGGTGGTGGTCGCCTGGCTAGGGGGTaGGCGGTCCGGGGTGGTGCT +
Preference number: 4 (lower is better)
Translates to: RLSGHGAASTSGLGQGGGRLARG*AVRGGA
Trigger: AGCACCACCCCGGACCGCCCACCCCCTAGCCAGGCG...ACCACCACCCTGACCAAGACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp ACGCCTGCTGCATGCAGGCGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTTGGTGCGACGACGCCTaGCTAGGGGGTGGGCGGTCC +
Preference number: 4 (lower is better)
Translates to: TPAACRRLSGHGAASTSGWCDDA*LGGGRS
Trigger: GGACCGCCCACCCCCTAGCCAGGCGTCGTCGCACCA...ACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACGCCTGCATGCAGCAGGCGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp TCGGCCACCCGAGCTGAGTCCCAGGGTGCAGTGGTAACCGTTGGGCACGCGGCGGTTGGCGACGTTGGGTaGCTGCTGAGGGAGGGCTTG +
Preference number: 4 (lower is better)
Translates to: SATRAESQGAVVTVGHAAVGDVG*LLREGL
Trigger: CAAGCCCTCCCTCAGCAGCCACCCAACGTCGCCAAC...CGCCGCGTGCCCAACGGTTACCACTGCACCCTGGGACTCAGCTCGGGTGGCCGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp TGGCGCCAGGACAGTGCTGGGCATCAGGTGCCCGGCCTCAGTGGCAGGAGCCGTAGCTGTTGGCGACGTTaGGTGGCTGCTGAGGGAGGG +
Preference number: 4 (lower is better)
Translates to: WRQDSAGHQVPGLSGRSRSCWRR*VAAEGG
Trigger: CCCTCCCTCAGCAGCCACCCAACGTCGCCAACAGCT...ACGGCTCCTGCCACTGAGGCCGGGCACCTGATGCCCAGCACTGTCCTGGCGCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CCTGCTGCATGCAGGCGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTCTTGAGCCGGCCTGTGGGTaGGGTCCCGGCTCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: PAACRRLSGHGAASTSGLEPACG*GPGSWP
Trigger: TGGCCAGGAGCCGGGACCCCACCCACAGGCCGGCTC...AAGACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACGCCTGCATGCAGCAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp TTGGTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGCCACCCGAGCTGAGTCCCAGGGAGCCTCACCAAGGTaGGCAAGGCCTCCCCCGAGG +
Preference number: 4 (lower is better)
Translates to: LVRVVVAVPCSATRAESQGASPR*ARPPPR
Trigger: CCTCGGGGGAGGCCTTGCCCACCTTGGTGAGGCTCC...CTGGGACTCAGCTCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGACCAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp AGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGTGGAACCACTGCCCTGTaGGTGGGGTCCCGGCTCCTG +
Preference number: 4 (lower is better)
Translates to: RSRRTFRWALLLCAARPRGTTAL*VGSRLL
Trigger: CAGGAGCCGGGACCCCACCCACAGGGCAGTGGTTCC...ACGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp TGGCGCCAGGACAGTGCTGGGCATCAGGTGCCCGGCCTCAGTGGCAGGAGCCGTCTGGGTGTGAGGGCCTaGCGGTCAGGCACTTGGTCA +
Preference number: 4 (lower is better)
Translates to: WRQDSAGHQVPGLSGRSRLGVRA*RSGTWS
Trigger: TGACCAAGTGCCTGACCGCCAGGCCCTCACACCCAG...ACGGCTCCTGCCACTGAGGCCGGGCACCTGATGCCCAGCACTGTCCTGGCGCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CACAGGAGCCTCACCAAGGTGGGCAAGGCCTCCCCCGAGGGCCGGCTGCCCCGTTCCAGTGCTCTCCACTaGCAAGGGCTTGCTACCTGG +
Preference number: 4 (lower is better)
Translates to: HRSLTKVGKASPEGRLPRSSALH*QGLATW
Trigger: CCAGGTAGCAAGCCCTTGCCAGTGGAGAGCACTGGA...ACGGGGCAGCCGGCCCTCGGGGGAGGCCTTGCCCACCTTGGTGAGGCTCCTGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GCACCAGTGGTCTTGGTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGCCACCCGACCCCCGTGGCGCTCCTaGACAGCAGCATCAGGGCTT +
Preference number: 4 (lower is better)
Translates to: APVVLVRVVVAVPCSATRPPWRS*TAASGL
Trigger: AAGCCCTGATGCTGCTGTTCAGGAGCGCCACGGGGG...TCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGACCAAGACCACTGGTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR TCA 90 bp GCTGTGCCGTGCTCGGCCACCCGAGCTGAGTCCCAGGGTGCAGTGGTAACCGTTCAGCTGGGGCCAGCTTaGTCTCCAGTGCCGTCCGGA +
Preference number: 4 (lower is better)
Translates to: AVPCSATRAESQGAVVTVQLGPA*SPVPSG
Trigger: TCCGGACGGCACTGGAGATCAAGCTGGCCCCAGCTG...AACGGTTACCACTGCACCCTGGGACTCAGCTCGGGTGGCCGAGCACGGCACAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR TCA 90 bp CCACGTGAAGGGTGCTCCCCACAGGACGCAGAGCTCCTCACAACGGCTCCAAGCTGGGGCTGGCATCTGTaGCGGGCTGAGTCTCGGCCG +
Preference number: 4 (lower is better)
Translates to: PREGCSPQDAELLTTAPSWGWHL*RAESRP
Trigger: CGGCCGAGACTCAGCCCGTCACAGATGCCAGCCCCA...GCTTGGAGCCGTTGTGAGGAGCTCTGCGTCCTGTGGGGAGCACCCTTCACGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GCCCGGCCTCAGTGGCAGGAGCCGTGTCCTCCCTCGGTCACTTGCTCTGAGTTTGCAGGGAGGCTGGTCTaGGCCCCGGCGAAGTGGATG +
Preference number: 4 (lower is better)
Translates to: ARPQWQEPCPPSVTCSEFAGRLV*APAKWM
Trigger: CATCCACTTCGCCGGGGCTCAGACCAGCCTCCCTGC...AAACTCAGAGCAAGTGACCGAGGGAGGACACGGCTCCTGCCACTGAGGCCGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp TTGGTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGCCACCCGAGCTGAGTCCCAGGGGCTGGGGCCTCCTTaGCACAGGGGAAGTCACCCA +
Preference number: 4 (lower is better)
Translates to: LVRVVVAVPCSATRAESQGLGPP*HRGSHP
Trigger: TGGGTGACTTCCCCTGTGGCAAGGAGGCCCCAGCCC...CTGGGACTCAGCTCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGACCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR GCA 90 bp AGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGTGGGCTGGGGCCTCCTTaGCACAGGGGAAGTCACCCA +
Preference number: 4 (lower is better)
Translates to: RSRRTFRWALLLCAARPRGLGPP*HRGSHP
Trigger: TGGGTGACTTCCCCTGTGGCAAGGAGGCCCCAGCCC...ACGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp ACCCGAGCTGAGTCCCAGGGTGCAGTGGTAACCGTTGGGCACGCGGCGGAGAGGCGCTCGATCTGCTGCTaGCGGCGCAGCTTCAGGAAG +
Preference number: 4 (lower is better)
Translates to: TRAESQGAVVTVGHAAERRSICC*RRSFRK
Trigger: CTTCCTGAAGCTGCGCCGGCAGCAGCAGATCGAGCG...CCTCTCCGCCGCGTGCCCAACGGTTACCACTGCACCCTGGGACTCAGCTCGGGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR GCA 90 bp TCGGCCACCCGAGCTGAGTCCCAGGGTGCAGTGGTAACCGTTGGGCACGCGGCGTTGGCCGAGTTCTGCTaGCTGGCGGCGATGGAGATG +
Preference number: 4 (lower is better)
Translates to: SATRAESQGAVVTVGHAALAEFC*LAAMEM
Trigger: CATCTCCATCGCCGCCAGGCAGCAGAACTCGGCCAA...CGCCGCGTGCCCAACGGTTACCACTGCACCCTGGGACTCAGCTCGGGTGGCCGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR GCA 90 bp GCTGAGTCCCAGGGTGCAGTGGTAACCGTTGGGCACGCGGCGGAGAGGGTGAGAGCCTTGGCCGAGTTCTaGTGCCTGGCGGCGATGGAG +
Preference number: 4 (lower is better)
Translates to: AESQGAVVTVGHAAERVRALAEF*CLAAME
Trigger: CTCCATCGCCGCCAGGCAGCAGAACTCGGCCAAGGC...TCTCACCCTCTCCGCCGCGTGCCCAACGGTTACCACTGCACCCTGGGACTCAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR GCA 90 bp GTCTTGGTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGCCACCCGAGCTGAGTCCGCCTTGGCCGAGTTCTaGTGCCTGGCGGCGATGGAG +
Preference number: 4 (lower is better)
Translates to: VLVRVVVAVPCSATRAESALAEF*CLAAME
Trigger: CTCCATCGCCGCCAGGCAGCAGAACTCGGCCAAGGC...GGACTCAGCTCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGACCAAGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR GCA 90 bp CCCGAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGAGCTGGCTGGCCCGCTaGTCCCACACCGAGCGCGCC +
Preference number: 4 (lower is better)
Translates to: PEGRLPRVDDKTHPLEHTSWLAR*SHTERA
Trigger: GGCGCGCTCGGTGTGGGAGCAGCGGGCCAGCCAGCT...CGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp CGGTTTAGGGTCTGGTGTGTGGTACGAGACCCAGGAAGGCAGGACAGGAAGGGGGGTGCCGGTGGTGCCTaGGCGGAGGGTCGACGCCCT +
Preference number: 4 (lower is better)
Translates to: RFRVWCVVRDPGRQDRKGGAGGA*AEGRRP
Trigger: AGGGCGTCGACCCTCCGCGCAGGCACCACCGGCACC...CCCCTTCCTGTCCTGCCTTCCTGGGTCTCGTACCACACACCAGACCCTAAACCG
67% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp CGGTTTAGGGTCTGGTGTGTGGTACGAGACCCAGGAAGGCAGGACAGGAAGGGGTCGCGGTGCCGGTGGTaGCTGCGCGGAGGGTCGACG +
Preference number: 4 (lower is better)
Translates to: RFRVWCVVRDPGRQDRKGSRCRW*LRGGST
Trigger: CGTCGACCCTCCGCGCAGGCACCACCGGCACCGCGA...CCCCTTCCTGTCCTGCCTTCCTGGGTCTCGTACCACACACCAGACCCTAAACCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp CCCGAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGTCGCGGTGCCGGTGGTaGCTGCGCGGAGGGTCGACG +
Preference number: 4 (lower is better)
Translates to: PEGRLPRVDDKTHPLEHTSRCRW*LRGGST
Trigger: CGTCGACCCTCCGCGCAGGCACCACCGGCACCGCGA...CGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GTCTTGGTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGCCACCCGAGCTGAGTCCTTGTCCTTGTCGCGGTaGCGGTGGTGCCTGCGCGGA +
Preference number: 4 (lower is better)
Translates to: VLVRVVVAVPCSATRAESLSLSR*RWCLRG
Trigger: TCCGCGCAGGCACCACCGGCACCGCGACAAGGACAA...GGACTCAGCTCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGACCAAGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR GCA 90 bp GAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGGGTCCGGGGTGGTGCTaGAAAGATGAGTCCCACGGG +
Preference number: 4 (lower is better)
Translates to: EVSAHFQVGPASLCRTATGPGWC*KDESHG
Trigger: CCCGTGGGACTCATCTTTGCAGCACCACCCCGGACC...CGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp ACGCCTGCTGCATGCAGGCGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTGAGGAGGATGAGGGCTaGCTCCGCTCCTGGGACCGG +
Preference number: 4 (lower is better)
Translates to: TPAACRRLSGHGAASTSGEEDEG*LRSWDR
Trigger: CCGGTCCCAGGAGCGGAGGCAGCCCTCATCCTCCTC...ACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACGCCTGCATGCAGCAGGCGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR GCA 90 bp TTGGTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGCCACCCGAGCTGAGTCCCAGGTGGTAGCTGTGCCGTaGTCGGCCACCCGAGCTGAG +
Preference number: 4 (lower is better)
Translates to: LVRVVVAVPCSATRAESQVVAVP*SATRAE
Trigger: CTCAGCTCGGGTGGCCGAGCACGGCACAGCTACCAC...CTGGGACTCAGCTCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGACCAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR GCA 90 bp ACCCGAGCTGAGTCCCAGGGTGCAGTGGTAACCGTTGGGCACGCGGCGGAGAGGCCCCCGAGGGCCGGCTaGCCCGTGTGGATGATAAAA +
Preference number: 4 (lower is better)
Translates to: TRAESQGAVVTVGHAAERPPRAG*PVWMIK
Trigger: TTTTATCATCCACACGGGGCAGCCGGCCCTCGGGGG...CCTCTCCGCCGCGTGCCCAACGGTTACCACTGCACCCTGGGACTCAGCTCGGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR GCA 90 bp GAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGCTTTCAGGTGGGCCCTaGTTCTCTGTGCCGCACGGC +
Preference number: 4 (lower is better)
Translates to: EVSAHFQVGPASLCRTATLSGGP*FSVPHG
Trigger: GCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAG...CGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp CACAGGAGCCTCACCAAGGTGGGCAAGGCCTCCCCCGAGGGCCGGCTGCCCCGTAAGCACGTGGTCAGCTaGCCTGTGGCTTCCTTGGAA +
Preference number: 4 (lower is better)
Translates to: HRSLTKVGKASPEGRLPRKHVVS*PVASLE
Trigger: TTCCAAGGAAGCCACAGGGCAGCTGACCACGTGCTT...ACGGGGCAGCCGGCCCTCGGGGGAGGCCTTGCCCACCTTGGTGAGGCTCCTGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CACAGGAGCCTCACCAAGGTGGGCAAGGCCTCCCCCGAGGGCCGGCTGCCCCGTCCGCATCTGTGCTGTTaGGGAAACAGGCCTTGTGGA +
Preference number: 4 (lower is better)
Translates to: HRSLTKVGKASPEGRLPRPHLCC*GNRPCG
Trigger: TCCACAAGGCCTGTTTCCCCAACAGCACAGATGCGG...ACGGGGCAGCCGGCCCTCGGGGGAGGCCTTGCCCACCTTGGTGAGGCTCCTGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp TCCAGGGAGGACAGAGCTTGCCTGAGTGAGCATTCGCTGACACTGGCGGGCTGCCTCGCACAGCCGGGCTaGGGCCTCCTTGCCACAGGG +
Preference number: 4 (lower is better)
Translates to: SREDRACLSEHSLTLAGCLAQPG*GLLATG
Trigger: CCCTGTGGCAAGGAGGCCCCAGCCCGGCTGTGCGAG...GCAGCCCGCCAGTGTCAGCGAATGCTCACTCAGGCAAGCTCTGTCCTCCCTGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CACAGGAGCCTCACCAAGGTGGGCAAGGCCTCCCCCGAGGGCCGGCTGCCCCGTACCGGAAGTAGCTTCTaGGCCCCAGGCCATACATCT +
Preference number: 4 (lower is better)
Translates to: HRSLTKVGKASPEGRLPRTGSSF*APGHTS
Trigger: AGATGTATGGCCTGGGGCCCAGAAGCTACTTCCGGT...ACGGGGCAGCCGGCCCTCGGGGGAGGCCTTGCCCACCTTGGTGAGGCTCCTGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGGCTGCCTGGCGGCGATaGAGATGTTCGCGGCAGACA +
Preference number: 4 (lower is better)
Translates to: EVSAHFQVGPASLCRTATAAWRR*RCSRQT
Trigger: TGTCTGCCGCGAACATCTCCATCGCCGCCAGGCAGC...CGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GCTGAGTCCCAGGGTGCAGTGGTAACCGTTGGGCACGCGGCGGAGAGGGTGAGAACACCGAGCGCGCCTTaGCCGAGTTCTGCTGCCTGG +
Preference number: 4 (lower is better)
Translates to: AESQGAVVTVGHAAERVRTPSAP*PSSAAW
Trigger: CCAGGCAGCAGAACTCGGCCAAGGCGCGCTCGGTGT...TCTCACCCTCTCCGCCGCGTGCCCAACGGTTACCACTGCACCCTGGGACTCAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp GTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCCCTTCCACTCGTGGGAGGAGGTTGTCGCGGTGCCGGTaGTGCCTGCGCGGAGGGTCG +
Preference number: 4 (lower is better)
Translates to: VVSCPVASLETPSTRGRRLSRCR*CLRGGS
Trigger: CGACCCTCCGCGCAGGCACCACCGGCACCGCGACAA...CCTCCTCCCACGAGTGGAAGGGGTTTCCAAGGAAGCCACAGGGCAGCTGACCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GCACCAGTGGTCTTGGTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGCCACCCGACACTGGGAACGACCGTaGCTTCCCCAAGAGGGCCCG +
Preference number: 4 (lower is better)
Translates to: APVVLVRVVVAVPCSATRHWERP*LPQEGP
Trigger: CGGGCCCTCTTGGGGAAGCCACGGTCGTTCCCAGTG...TCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGACCAAGACCACTGGTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp GCTGAGTCCCAGGGTGCAGTGGTAACCGTTGGGCACGCGGCGGAGAGGGTGAGACGAGTCTGTGCGCACTaGGTCCTCAGCAGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: AESQGAVVTVGHAAERVRRVCAH*VLSSQG
Trigger: GCCCTGGCTGCTGAGGACCCAGTGCGCACAGACTCG...TCTCACCCTCTCCGCCGCGTGCCCAACGGTTACCACTGCACCCTGGGACTCAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp TCGGCCACCCGAGCTGAGTCCCAGGGTGCAGTGGTAACCGTTGGGCACGCGGCGACAGCAGGATGCGGATaGTGTAGCCCTGGCGGAGCA +
Preference number: 4 (lower is better)
Translates to: SATRAESQGAVVTVGHAATAGCG*CSPGGA
Trigger: TGCTCCGCCAGGGCTACACCATCCGCATCCTGCTGT...CGCCGCGTGCCCAACGGTTACCACTGCACCCTGGGACTCAGCTCGGGTGGCCGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp GAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGGACACAGGACCCATCTaGGAGAGGCCTCCAGGAGCC +
Preference number: 4 (lower is better)
Translates to: EVSAHFQVGPASLCRTATDTGPI*ERPPGA
Trigger: GGCTCCTGGAGGCCTCTCCCAGATGGGTCCTGTGTC...CGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GCTGAGTCCCAGGGTGCAGTGGTAACCGTTGGGCACGCGGCGGAGAGGGTGAGAGCTCCAGGGGTGGCCTaGCCTCATGGGGTGCATCCT +
Preference number: 4 (lower is better)
Translates to: AESQGAVVTVGHAAERVRAPGVA*PHGVHP
Trigger: AGGATGCACCCCATGAGGCCAGGCCACCCCTGGAGC...TCTCACCCTCTCCGCCGCGTGCCCAACGGTTACCACTGCACCCTGGGACTCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp GCTGCATGCAGGCGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTCTTGGTGCCACGCTCCAGGGGTaGCCTGGCCTCATGGGGTGC +
Preference number: 4 (lower is better)
Translates to: AACRRLSGHGAASTSGLGATLQG*PGLMGC
Trigger: GCACCCCATGAGGCCAGGCCACCCCTGGAGCGTGGC...ACCAAGACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACGCCTGCATGCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp AGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGTGGGATCTCTGTGGAGTaGCCACGCTCCAGGGGTGGC +
Preference number: 4 (lower is better)
Translates to: RSRRTFRWALLLCAARPRGISVE*PRSRGG
Trigger: GCCACCCCTGGAGCGTGGCCACTCCACAGAGATCCC...ACGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GTGCAGCTAGCACCAGTGGTCTTGGTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGTCCCACGGGGCCGCTaGGCCAGCGTGGAGATGGAG +
Preference number: 4 (lower is better)
Translates to: VQLAPVVLVRVVVAVPCSVPRGR*ASVEME
Trigger: CTCCATCTCCACGCTGGCCCAGCGGCCCCGTGGGAC...CGAGCACGGCACAGCTACCACCACCCTGACCAAGACCACTGGTGCTAGCTGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp ACCCGAGCTGAGTCCCAGGGTGCAGTGGTAACCGTTGGGCACGCGGCGGAGAGGGTGGGCGGTCCGGGGTaGTGCTGCAAAGATGAGTCC +
Preference number: 4 (lower is better)
Translates to: TRAESQGAVVTVGHAAERVGGPG*CCKDES
Trigger: GGACTCATCTTTGCAGCACCACCCCGGACCGCCCAC...CCTCTCCGCCGCGTGCCCAACGGTTACCACTGCACCCTGGGACTCAGCTCGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp CCCCTCCGTCCCGAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCGTGGGCGGTCCGGGGTaGTGCTGCAAAGATGAGTCC +
Preference number: 4 (lower is better)
Translates to: PLRPEVSAHFQVGPASLCVGGPG*CCKDES
Trigger: GGACTCATCTTTGCAGCACCACCCCGGACCGCCCAC...GCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTCGGGACGGAGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CGGTTTAGGGTCTGGTGTGTGGTACGAGACCCAGGAAGGCAGGACAGGAAGGGGCGCCTGGCTAGGGGGTaGGCGGTCCGGGGTGGTGCT +
Preference number: 4 (lower is better)
Translates to: RFRVWCVVRDPGRQDRKGRLARG*AVRGGA
Trigger: AGCACCACCCCGGACCGCCCACCCCCTAGCCAGGCG...CCCCTTCCTGTCCTGCCTTCCTGGGTCTCGTACCACACACCAGACCCTAAACCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp ACCCGAGCTGAGTCCCAGGGTGCAGTGGTAACCGTTGGGCACGCGGCGGAGAGGGTTGGCGACGTTGGGTaGCTGCTGAGGGAGGGCTTG +
Preference number: 4 (lower is better)
Translates to: TRAESQGAVVTVGHAAERVGDVG*LLREGL
Trigger: CAAGCCCTCCCTCAGCAGCCACCCAACGTCGCCAAC...CCTCTCCGCCGCGTGCCCAACGGTTACCACTGCACCCTGGGACTCAGCTCGGGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp CCCCTCCGTCCCGAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCGTTGGCGACGTTGGGTaGCTGCTGAGGGAGGGCTTG +
Preference number: 4 (lower is better)
Translates to: PLRPEVSAHFQVGPASLCVGDVG*LLREGL
Trigger: CAAGCCCTCCCTCAGCAGCCACCCAACGTCGCCAAC...GCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTCGGGACGGAGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CCCCTCCGTCCCGAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCTCCTGGCCAGCTGTTaGCGACGTTGGGTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: PLRPEVSAHFQVGPASLCLLASC*RRWVAA
Trigger: AGCAGCCACCCAACGTCGCCAACAGCTGGCCAGGAG...GCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTCGGGACGGAGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp ACCCGAGCTGAGTCCCAGGGTGCAGTGGTAACCGTTGGGCACGCGGCGGAGAGGTCCTCAGGCAGGGCGTaGACAGAGGCCTCACTGTCC +
Preference number: 4 (lower is better)
Translates to: TRAESQGAVVTVGHAAERSSGRA*TEASLS
Trigger: GGACAGTGAGGCCTCTGTCCACGCCCTGCCTGAGGA...CCTCTCCGCCGCGTGCCCAACGGTTACCACTGCACCCTGGGACTCAGCTCGGGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp CCCCTCCGTCCCGAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCAGCGGCCCGAGTTGGTaGCCACAGCCTCCTCGAAAG +
Preference number: 4 (lower is better)
Translates to: PLRPEVSAHFQVGPASLCSGPSW*PQPPRK
Trigger: CTTTCGAGGAGGCTGTGGCCACCAACTCGGGCCGCT...GCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTCGGGACGGAGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GTCTTGGTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGCCACCCGAGCTGAGTCCAGGAGCGGCCCGAGTTaGTGGCCACAGCCTCCTCGA +
Preference number: 4 (lower is better)
Translates to: VLVRVVVAVPCSATRAESRSGPS*WPQPPR
Trigger: TCGAGGAGGCTGTGGCCACCAACTCGGGCCGCTCCT...GGACTCAGCTCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGACCAAGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp AGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGTAGGAGCGGCCCGAGTTaGTGGCCACAGCCTCCTCGA +
Preference number: 4 (lower is better)
Translates to: RSRRTFRWALLLCAARPRRSGPS*WPQPPR
Trigger: TCGAGGAGGCTGTGGCCACCAACTCGGGCCGCTCCT...ACGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp TCGGCCACCCGAGCTGAGTCCCAGGGTGCAGTGGTAACCGTTGGGCACGCGGCGACACGTAGGAAGTCCTaGAGGAGCGGCCCGAGTTGG +
Preference number: 4 (lower is better)
Translates to: SATRAESQGAVVTVGHAATRRKS*RSGPSW
Trigger: CCAACTCGGGCCGCTCCTCCAGGACTTCCTACGTGT...CGCCGCGTGCCCAACGGTTACCACTGCACCCTGGGACTCAGCTCGGGTGGCCGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp GTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGCCACCCGAGCTGAGTCCCAGGGTTGCAGTGGTAACCGTTaGGCACGCGGCGGAGAGGGT +
Preference number: 4 (lower is better)
Translates to: VRVVVAVPCSATRAESQGCSGNR*ARGGEG
Trigger: ACCCTCTCCGCCGCGTGCCCAACGGTTACCACTGCA...ACCCTGGGACTCAGCTCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp CCCCTCCGTCCCGAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCTGCAGTGGTAACCGTTaGGCACGCGGCGGAGAGGGT +
Preference number: 4 (lower is better)
Translates to: PLRPEVSAHFQVGPASLCCSGNR*ARGGEG
Trigger: ACCCTCTCCGCCGCGTGCCCAACGGTTACCACTGCA...GCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTCGGGACGGAGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCCCTTCCACTCGTGGGAGGAGGGGAGTCAGGGGCGTCTaGGGGAGCTGCCTCCGCCCA +
Preference number: 4 (lower is better)
Translates to: VVSCPVASLETPSTRGRRGVRGV*GSCLRP
Trigger: TGGGCGGAGGCAGCTCCCCCAGACGCCCCTGACTCC...CCTCCTCCCACGAGTGGAAGGGGTTTCCAAGGAAGCCACAGGGCAGCTGACCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGCCCCGGCGAAGTGGATaGGTGAGGAGTTGGCCGTCT +
Preference number: 4 (lower is better)
Translates to: EVSAHFQVGPASLCRTATPRRSG*VRSWPS
Trigger: AGACGGCCAACTCCTCACCCATCCACTTCGCCGGGG...CGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGAGAAGGCAGGGAGGCTaGTCTGAGCCCCGGCGAAGT +
Preference number: 4 (lower is better)
Translates to: EVSAHFQVGPASLCRTATRRQGG*SEPRRS
Trigger: ACTTCGCCGGGGCTCAGACCAGCCTCCCTGCCTTCT...CGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CACAGGAGCCTCACCAAGGTGGGCAAGGCCTCCCCCGAGGGCCGGCTGCCCCGTTTAGGGTCTGGTGTGTaGTACGAGACCCAGGAAGGC +
Preference number: 4 (lower is better)
Translates to: HRSLTKVGKASPEGRLPRLGSGV*YETQEG
Trigger: GCCTTCCTGGGTCTCGTACCACACACCAGACCCTAA...ACGGGGCAGCCGGCCCTCGGGGGAGGCCTTGCCCACCTTGGTGAGGCTCCTGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CCCCTCCGTCCCGAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGGCGCACTTTCAGGTaGGCCCTGCTTCTCTGTGCC +
Preference number: 4 (lower is better)
Translates to: PLRPEVSAHFQVGPASLCRRTFR*ALLLCA
Trigger: GGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCG...GCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTCGGGACGGAGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CCCCTCCGTCCCGAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCCGTCTACGTCCACCTaGACCGGACAGGGCTGCACA +
Preference number: 4 (lower is better)
Translates to: PLRPEVSAHFQVGPASLCPSTST*TGQGCT
Trigger: TGTGCAGCCCTGTCCGGTCCAGGTGGACGTAGACGG...GCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTCGGGACGGAGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp TCCAGGGAGGACAGAGCTTGCCTGAGTGAGCATTCGCTGACACTGGCGGGCTGCGGTGCCCGGCCTCAGTaGCAGGAGCCGTGTCCTCCC +
Preference number: 4 (lower is better)
Translates to: SREDRACLSEHSLTLAGCGARPQ*QEPCPP
Trigger: GGGAGGACACGGCTCCTGCCACTGAGGCCGGGCACC...GCAGCCCGCCAGTGTCAGCGAATGCTCACTCAGGCAAGCTCTGTCCTCCCTGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GCTGCATGCAGGCGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTCTTGGTCTGTCTTCCCGCTCTTaGGGCTGGCGCGGGCGAAGG +
Preference number: 4 (lower is better)
Translates to: AACRRLSGHGAASTSGLGLSSRS*GWRGRR
Trigger: CCTTCGCCCGCGCCAGCCTCAAGAGCGGGAAGACAG...ACCAAGACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACGCCTGCATGCAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR TCA 90 bp TCCAGGGAGGACAGAGCTTGCCTGAGTGAGCATTCGCTGACACTGGCGGGCTGCCTGTCTTCCCGCTCTTaGGGCTGGCGCGGGCGAAGG +
Preference number: 4 (lower is better)
Translates to: SREDRACLSEHSLTLAGCLSSRS*GWRGRR
Trigger: CCTTCGCCCGCGCCAGCCTCAAGAGCGGGAAGACAG...GCAGCCCGCCAGTGTCAGCGAATGCTCACTCAGGCAAGCTCTGTCCTCCCTGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp TTGGTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGCCACCCGAGCTGAGTCCCAGAGGAGCTTCCCGGCTTaGTGGCCGCCCAGACCACTT +
Preference number: 4 (lower is better)
Translates to: LVRVVVAVPCSATRAESQRSFPA*WPPRPL
Trigger: AAGTGGTCTGGGCGGCCATCAAGCCGGGAAGCTCCT...CTGGGACTCAGCTCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGACCAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR TCA 90 bp CCCCTCCGTCCCGAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCGGATCTGGAAGACAGTaGGGATGGCGGCAGGGAAGG +
Preference number: 4 (lower is better)
Translates to: PLRPEVSAHFQVGPASLCGSGRQ*GWRQGR
Trigger: CCTTCCCTGCCGCCATCCTCACTGTCTTCCAGATCC...GCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTCGGGACGGAGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GTCTTGGTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGCCACCCGAGCTGAGTCCTTCTCCACAGCCTCGTaGGCAGGCTGCGCCTTGTGC +
Preference number: 4 (lower is better)
Translates to: VLVRVVVAVPCSATRAESFSTAS*AGCALC
Trigger: GCACAAGGCGCAGCCTGCTCACGAGGCTGTGGAGAA...GGACTCAGCTCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGACCAAGAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR TCA 90 bp TCGGCCACCCGAGCTGAGTCCCAGGGTGCAGTGGTAACCGTTGGGCACGCGGCGCGAGTGACGTTCCGCTaGTTGTCTGCATCCTCTGGC +
Preference number: 4 (lower is better)
Translates to: SATRAESQGAVVTVGHAARVTFR*LSASSG
Trigger: GCCAGAGGATGCAGACAATCAGCGGAACGTCACTCG...CGCCGCGTGCCCAACGGTTACCACTGCACCCTGGGACTCAGCTCGGGTGGCCGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR TCA 90 bp GCCCGGCCTCAGTGGCAGGAGCCGTGTCCTCCCTCGGTCACTTGCTCTGAGTTTTTCGGGTCTGGGGGCTaGCTGCCCATGCGAGTGACG +
Preference number: 4 (lower is better)
Translates to: ARPQWQEPCPPSVTCSEFFGSGG*LPMRVT
Trigger: CGTCACTCGCATGGGCAGTCAGCCCCCAGACCCGAA...AAACTCAGAGCAAGTGACCGAGGGAGGACACGGCTCCTGCCACTGAGGCCGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GTGCAGCTAGCACCAGTGGTCTTGGTCAGGGTGGTGGTAGCTGTGCCGTGCTCGCCAGTGCCGTCCGGATaGGGGCCATCAGCGTGGACG +
Preference number: 4 (lower is better)
Translates to: VQLAPVVLVRVVVAVPCSPVPSG*GPSAWT
Trigger: CGTCCACGCTGATGGCCCTCATCCGGACGGCACTGG...CGAGCACGGCACAGCTACCACCACCCTGACCAAGACCACTGGTGCTAGCTGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR TCA 90 bp GCCCGGCCTCAGTGGCAGGAGCCGTGTCCTCCCTCGGTCACTTGCTCTGAGTTTCAGCTGGGGCCAGCTTaGTCTCCAGTGCCGTCCGGA +
Preference number: 4 (lower is better)
Translates to: ARPQWQEPCPPSVTCSEFQLGPA*SPVPSG
Trigger: TCCGGACGGCACTGGAGATCAAGCTGGCCCCAGCTG...AAACTCAGAGCAAGTGACCGAGGGAGGACACGGCTCCTGCCACTGAGGCCGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp CCTGCTGCATGCAGGCGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTCTTTGGGGCTGGCATCTGTaGCGGGCTGAGTCTCGGCCG +
Preference number: 4 (lower is better)
Translates to: PAACRRLSGHGAASTSGLWGWHL*RAESRP
Trigger: CGGCCGAGACTCAGCCCGTCACAGATGCCAGCCCCA...AAGACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACGCCTGCATGCAGCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR TCA 90 bp GCGGTCACGGTGCAGCTAGCACCAGTGGTCTTGGTCAGGGTGGTGGTAGCTGTGTGGGGCTGGCATCTGTaGCGGGCTGAGTCTCGGCCG +
Preference number: 4 (lower is better)
Translates to: AVTVQLAPVVLVRVVVAVWGWHL*RAESRP
Trigger: CGGCCGAGACTCAGCCCGTCACAGATGCCAGCCCCA...CACAGCTACCACCACCCTGACCAAGACCACTGGTGCTAGCTGCACCGTGACCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR TCA 90 bp GAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGCAGCCTCCTCGAAAGTaGGAGTGTCCTCAGGCAGGG +
Preference number: 4 (lower is better)
Translates to: EVSAHFQVGPASLCRTATQPPRK*ECPQAG
Trigger: CCCTGCCTGAGGACACTCTCACTTTCGAGGAGGCTG...CGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GTGCAGCTAGCACCAGTGGTCTTGGTCAGGGTGGTGGTAGCTGTGCCGTGCTCGACGCGGCGGAGAGGGTaGGACTGGGAGGTCAGGGAG +
Preference number: 4 (lower is better)
Translates to: VQLAPVVLVRVVVAVPCSTRRRG*DWEVRE
Trigger: CTCCCTGACCTCCCAGTCTCACCCTCTCCGCCGCGT...CGAGCACGGCACAGCTACCACCACCCTGACCAAGACCACTGGTGCTAGCTGCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR TCA 90 bp GCTGCATGCAGGCGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTCTTGGTCTCGGCCACCCGAGCTaGGTCCCAGGGTGCAGTGGT +
Preference number: 4 (lower is better)
Translates to: AACRRLSGHGAASTSGLGLGHPS*VPGCSG
Trigger: ACCACTGCACCCTGGGACTCAGCTCGGGTGGCCGAG...ACCAAGACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACGCCTGCATGCAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR TCA 90 bp GCACCAGTGGTCTTGGTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGCCACCCGACTGCATGCAGGCGTCTaGGCGGTCACGGTGCAGCTA +
Preference number: 4 (lower is better)
Translates to: APVVLVRVVVAVPCSATRLHAGV*AVTVQL
Trigger: TAGCTGCACCGTGACCGCTCAGACGCCTGCATGCAG...TCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGACCAAGACCACTGGTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR TCA 90 bp CGGTTTAGGGTCTGGTGTGTGGTACGAGACCCAGGAAGGCAGGACAGGAAGGGGCGGAAAGCCCACGGCTaGGCCGGCCTGGGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: RFRVWCVVRDPGRQDRKGRKAHG*AGLGRR
Trigger: CCTTCTCCCCAGGCCGGCTCAGCCGTGGGCTTTCCG...CCCCTTCCTGTCCTGCCTTCCTGGGTCTCGTACCACACACCAGACCCTAAACCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GCCCGGCCTCAGTGGCAGGAGCCGTGTCCTCCCTCGGTCACTTGCTCTGAGTTTCGGTTCCTGTGGGGCTaGCGGTGTCCAGGGAGGACA +
Preference number: 4 (lower is better)
Translates to: ARPQWQEPCPPSVTCSEFRFLWG*RCPGRT
Trigger: TGTCCTCCCTGGACACCGTCAGCCCCACAGGAACCG...AAACTCAGAGCAAGTGACCGAGGGAGGACACGGCTCCTGCCACTGAGGCCGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GCTGAGTCCCAGGGTGCAGTGGTAACCGTTGGGCACGCGGCGGAGAGGGTGAGATCTCGCTCGATCTGCTaGTGCCGGCGCAGCTTCAGG +
Preference number: 4 (lower is better)
Translates to: AESQGAVVTVGHAAERVRSRSIC*CRRSFR
Trigger: CCTGAAGCTGCGCCGGCAGCAGCAGATCGAGCGAGA...TCTCACCCTCTCCGCCGCGTGCCCAACGGTTACCACTGCACCCTGGGACTCAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR GCA 90 bp AGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGTTCTCGCTCGATCTGCTaGTGCCGGCGCAGCTTCAGG +
Preference number: 4 (lower is better)
Translates to: RSRRTFRWALLLCAARPRSRSIC*CRRSFR
Trigger: CCTGAAGCTGCGCCGGCAGCAGCAGATCGAGCGAGA...ACGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GTCTTGGTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGCCACCCGAGCTGAGTCCAGCTCTCGCTCGATCTaGTGCTGCCGGCGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: VLVRVVVAVPCSATRAESSSRSI*CCRRSF
Trigger: GAAGCTGCGCCGGCAGCAGCAGATCGAGCGAGAGCT...GGACTCAGCTCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGACCAAGAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR GCA 90 bp GCTGTGCCGTGCTCGGCCACCCGAGCTGAGTCCCAGGGTGCAGTGGTAACCGTTAGCTCTCGCTCGATCTaGTGCTGCCGGCGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: AVPCSATRAESQGAVVTVSSRSI*CCRRSF
Trigger: GAAGCTGCGCCGGCAGCAGCAGATCGAGCGAGAGCT...AACGGTTACCACTGCACCCTGGGACTCAGCTCGGGTGGCCGAGCACGGCACAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR GCA 90 bp GAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGTTGGCCGAGTTCTGCTaGCTGGCGGCGATGGAGATG +
Preference number: 4 (lower is better)
Translates to: EVSAHFQVGPASLCRTATLAEFC*LAAMEM
Trigger: CATCTCCATCGCCGCCAGGCAGCAGAACTCGGCCAA...CGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp CCACGTGAAGGGTGCTCCCCACAGGACGCAGAGCTCCTCACAACGGCTCCAAGCGCCTTGGCCGAGTTCTaGTGCCTGGCGGCGATGGAG +
Preference number: 4 (lower is better)
Translates to: PREGCSPQDAELLTTAPSALAEF*CLAAME
Trigger: CTCCATCGCCGCCAGGCAGCAGAACTCGGCCAAGGC...GCTTGGAGCCGTTGTGAGGAGCTCTGCGTCCTGTGGGGAGCACCCTTCACGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGAGCTGGCTGGCCCGCTaGTCCCACACCGAGCGCGCC +
Preference number: 4 (lower is better)
Translates to: AGCPVWMIKLIHWNTRLLSWLAR*SHTERA
Trigger: GGCGCGCTCGGTGTGGGAGCAGCGGGCCAGCCAGCT...CAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTAGCTGGCTGGCCCGCTaGTCCCACACCGAGCGCGCC +
Preference number: 4 (lower is better)
Translates to: EGRLPRVDDKTHPLEHTPSWLAR*SHTERA
Trigger: GGCGCGCTCGGTGTGGGAGCAGCGGGCCAGCCAGCT...AGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGCCTCAGGTCGGGCTTTaGCTCCCACGGGCCCCCGCG +
Preference number: 4 (lower is better)
Translates to: AGCPVWMIKLIHWNTRLLPQVGL*LPRAPA
Trigger: CGCGGGGGCCCGTGGGAGGCAAAGCCCGACCTGAGG...CAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTTCGCGGTGCCGGTGGTaGCTGCGCGGAGGGTCGACG +
Preference number: 4 (lower is better)
Translates to: EGRLPRVDDKTHPLEHTPSRCRW*LRGGST
Trigger: CGTCGACCCTCCGCGCAGGCACCACCGGCACCGCGA...AGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTCGCCTTCGGGGCCTCTaGTCGGTCCTGGTCCCCCGC +
Preference number: 4 (lower is better)
Translates to: EGRLPRVDDKTHPLEHTPRLRGL*SVLVPR
Trigger: GCGGGGGACCAGGACCGAGCAGAGGCCCCGAAGGCG...AGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp CGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTCTTGGTCAGGGTGGTGGTTTGCTCGGATCCTGGTaGCGGTGCGCGCGGTGGCGT +
Preference number: 4 (lower is better)
Translates to: RLSGHGAASTSGLGQGGGLLGSW*RCARWR
Trigger: ACGCCACCGCGCGCACCGGCACCAGGATCCGAGCAA...ACCACCACCCTGACCAAGACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR GCA 90 bp CCTGCTGCATGCAGGCGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTCTTTTGCTCGGATCCTGGTaGCGGTGCGCGCGGTGGCGT +
Preference number: 4 (lower is better)
Translates to: PAACRRLSGHGAASTSGLLLGSW*RCARWR
Trigger: ACGCCACCGCGCGCACCGGCACCAGGATCCGAGCAA...AAGACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACGCCTGCATGCAGCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR GCA 90 bp GTGCAGCTAGCACCAGTGGTCTTGGTCAGGGTGGTGGTAGCTGTGCCGTGCTCGCGCCGGCGCACTCCTTaGTCGGATCCTGGTGCCGGT +
Preference number: 4 (lower is better)
Translates to: VQLAPVVLVRVVVAVPCSRRRTP*SDPGAG
Trigger: ACCGGCACCAGGATCCGAGCAAGGAGTGCGCCGGCG...CGAGCACGGCACAGCTACCACCACCCTGACCAAGACCACTGGTGCTAGCTGCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR GCA 90 bp TTGGTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGCCACCCGAGCTGAGTCCCAGTCCTGGGCGAGTCTGTaGGCACTGGGTCCTCAGCAG +
Preference number: 4 (lower is better)
Translates to: LVRVVVAVPCSATRAESQSWASL*ALGPQQ
Trigger: CTGCTGAGGACCCAGTGCGCACAGACTCGCCCAGGA...CTGGGACTCAGCTCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGACCAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR GCA 90 bp TGGCGCCAGGACAGTGCTGGGCATCAGGTGCCCGGCCTCAGTGGCAGGAGCCGTAGATGGACAGCTCCATaGGGTACCCAGGGCTTGGAC +
Preference number: 4 (lower is better)
Translates to: WRQDSAGHQVPGLSGRSRRWTAP*GTQGLD
Trigger: GTCCAAGCCCTGGGTACCGCATGGAGCTGTCCATCT...ACGGCTCCTGCCACTGAGGCCGGGCACCTGATGCCCAGCACTGTCCTGGCGCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp CCCCTCCGTCCCGAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCAGGCCTCCAGGAGCCTaGTGCATCTGGTCTCTGGTG +
Preference number: 4 (lower is better)
Translates to: PLRPEVSAHFQVGPASLCRPPGA*CIWSLV
Trigger: CACCAGAGACCAGATGCAGCAGGCTCCTGGAGGCCT...GCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTCGGGACGGAGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGCCACCCGAGCTGAGTCCCAGGGTACAGCCGGCTGTGTCTaGTCCAGGGTGGCCTTCAGA +
Preference number: 4 (lower is better)
Translates to: VRVVVAVPCSATRAESQGTAGCV*SRVAFR
Trigger: TCTGAAGGCCACCCTGGAGCAGACACAGCCGGCTGT...ACCCTGGGACTCAGCTCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR GCA 90 bp GCTGAGTCCCAGGGTGCAGTGGTAACCGTTGGGCACGCGGCGGAGAGGGTGAGAGGCGGTCCGGGGTGGTaGTGCAAAGATGAGTCCCAC +
Preference number: 4 (lower is better)
Translates to: AESQGAVVTVGHAAERVRGGPGW*CKDESH
Trigger: GTGGGACTCATCTTTGCAGCACCACCCCGGACCGCC...TCTCACCCTCTCCGCCGCGTGCCCAACGGTTACCACTGCACCCTGGGACTCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR GCA 90 bp GCGGTCACGGTGCAGCTAGCACCAGTGGTCTTGGTCAGGGTGGTGGTAGCTGTGCGGTGGTGGTGGTGGTaGGACGACGCCTGGCTAGGG +
Preference number: 4 (lower is better)
Translates to: AVTVQLAPVVLVRVVVAVRWWWW*DDAWLG
Trigger: CCCTAGCCAGGCGTCGTCGCACCACCACCACCACCG...CACAGCTACCACCACCCTGACCAAGACCACTGGTGCTAGCTGCACCGTGACCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR GCA 90 bp GCCCGGCCTCAGTGGCAGGAGCCGTGTCCTCCCTCGGTCACTTGCTCTGAGTTTTCTGCTTCCTGTCCCTaGGGCGGTGGCAGCGGTGGT +
Preference number: 4 (lower is better)
Translates to: ARPQWQEPCPPSVTCSEFSASCP*GGGSGG
Trigger: ACCACCGCTGCCACCGCCGCAGGGACAGGAAGCAGA...AAACTCAGAGCAAGTGACCGAGGGAGGACACGGCTCCTGCCACTGAGGCCGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGCCGGCCCCACAGCACTaGTTGGTGCGCCATCCATAT +
Preference number: 4 (lower is better)
Translates to: EVSAHFQVGPASLCRTATPAPQH*LVRHPY
Trigger: ATATGGATGGCGCACCAAGCAGTGCTGTGGGGCCGG...CGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCCCTTCCACTCGTGGGAGGAGGGAGGAGGATGAGGGCTaGCTCCGCTCCTGGGACCGG +
Preference number: 4 (lower is better)
Translates to: VVSCPVASLETPSTRGRREEDEG*LRSWDR
Trigger: CCGGTCCCAGGAGCGGAGGCAGCCCTCATCCTCCTC...CCTCCTCCCACGAGTGGAAGGGGTTTCCAAGGAAGCCACAGGGCAGCTGACCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp ACCCGAGCTGAGTCCCAGGGTGCAGTGGTAACCGTTGGGCACGCGGCGGAGAGGCTGAGGGGGTCTCTCTaGAGCAGGGCGTTGTGTTCG +
Preference number: 4 (lower is better)
Translates to: TRAESQGAVVTVGHAAERLRGSL*SRALCS
Trigger: CGAACACAACGCCCTGCTGCAGAGAGACCCCCTCAG...CCTCTCCGCCGCGTGCCCAACGGTTACCACTGCACCCTGGGACTCAGCTCGGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR GCA 90 bp GTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGCCACCCGAGCTGAGTCCCAGGGTCTGAGGGGGTCTCTCTaGAGCAGGGCGTTGTGTTCG +
Preference number: 4 (lower is better)
Translates to: VRVVVAVPCSATRAESQGLRGSL*SRALCS
Trigger: CGAACACAACGCCCTGCTGCAGAGAGACCCCCTCAG...ACCCTGGGACTCAGCTCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR GCA 90 bp CCCCTCCGTCCCGAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCTGAGGGGGTCTCTCTaGAGCAGGGCGTTGTGTTCG +
Preference number: 4 (lower is better)
Translates to: PLRPEVSAHFQVGPASLCLRGSL*SRALCS
Trigger: CGAACACAACGCCCTGCTGCAGAGAGACCCCCTCAG...GCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTCGGGACGGAGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp TGGCGCCAGGACAGTGCTGGGCATCAGGTGCCCGGCCTCAGTGGCAGGAGCCGTACTGGAACACACGCCTaGTGCATGCAGGCGTCTGAG +
Preference number: 4 (lower is better)
Translates to: WRQDSAGHQVPGLSGRSRTGTHA*CMQASE
Trigger: CTCAGACGCCTGCATGCAGCAGGCGTGTGTTCCAGT...ACGGCTCCTGCCACTGAGGCCGGGCACCTGATGCCCAGCACTGTCCTGGCGCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp CCCCTCCGTCCCGAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCTGACACTGGCGGGCTaGACAAGCCACGACTGTGTC +
Preference number: 4 (lower is better)
Translates to: PLRPEVSAHFQVGPASLCLTLAG*TSHDCV
Trigger: GACACAGTCGTGGCTTGTGCAGCCCGCCAGTGTCAG...GCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTCGGGACGGAGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp AGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGTCCACTGGCAAGGGCTTaGTACCTGGCTGCCATCGCG +
Preference number: 4 (lower is better)
Translates to: RSRRTFRWALLLCAARPRPLARA*YLAAIA
Trigger: CGCGATGGCAGCCAGGTAGCAAGCCCTTGCCAGTGG...ACGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCCCTTCCACTCGTGGGAGGAGGGGGCTTCCTCCCTCCTaGCCTGACGGCCCCACATCC +
Preference number: 4 (lower is better)
Translates to: VVSCPVASLETPSTRGRRGLPPS*PDGPTS
Trigger: GGATGTGGGGCCGTCAGGGCAGGAGGGAGGAAGCCC...CCTCCTCCCACGAGTGGAAGGGGTTTCCAAGGAAGCCACAGGGCAGCTGACCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp CCCCTCCGTCCCGAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCCTCACTTGACTGCCTaGTCCCTGTGTCTGGCGCCA +
Preference number: 4 (lower is better)
Translates to: PLRPEVSAHFQVGPASLCPHLTA*SLCLAP
Trigger: TGGCGCCAGACACAGGGAGCAGGCAGTCAAGTGAGG...GCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTCGGGACGGAGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGCCACCCGAGCTGAGTCCCAGGGTGCCAAAGTTGGGTCCTaGCCAGTACTCCCGGCACTC +
Preference number: 4 (lower is better)
Translates to: VRVVVAVPCSATRAESQGAKVGS*PVLPAL
Trigger: GAGTGCCGGGAGTACTGGCCAGGACCCAACTTTGGC...ACCCTGGGACTCAGCTCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp CCCCTCCGTCCCGAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCCCTCTCTCGCTCCTTaGCAAACTCCCCCGAGAGCA +
Preference number: 4 (lower is better)
Translates to: PLRPEVSAHFQVGPASLCPSLAP*QTPPRA
Trigger: TGCTCTCGGGGGAGTTTGCCAAGGAGCGAGAGAGGG...GCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTCGGGACGGAGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CACAGGAGCCTCACCAAGGTGGGCAAGGCCTCCCCCGAGGGCCGGCTGCCCCGTTTCTGCTCTTCTTGGTaGCCGCTCTCTTCAGCACGT +
Preference number: 4 (lower is better)
Translates to: HRSLTKVGKASPEGRLPRFCSSW*PLSSAR
Trigger: ACGTGCTGAAGAGAGCGGCCACCAAGAAGAGCAGAA...ACGGGGCAGCCGGCCCTCGGGGGAGGCCTTGCCCACCTTGGTGAGGCTCCTGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CCACGTGAAGGGTGCTCCCCACAGGACGCAGAGCTCCTCACAACGGCTCCAAGCACACCGAGCGCGCCTTaGCCGAGTTCTGCTGCCTGG +
Preference number: 4 (lower is better)
Translates to: PREGCSPQDAELLTTAPSTPSAP*PSSAAW
Trigger: CCAGGCAGCAGAACTCGGCCAAGGCGCGCTCGGTGT...GCTTGGAGCCGTTGTGAGGAGCTCTGCGTCCTGTGGGGAGCACCCTTCACGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GCCCGGCCTCAGTGGCAGGAGCCGTGTCCTCCCTCGGTCACTTGCTCTGAGTTTACACCGAGCGCGCCTTaGCCGAGTTCTGCTGCCTGG +
Preference number: 4 (lower is better)
Translates to: ARPQWQEPCPPSVTCSEFTPSAP*PSSAAW
Trigger: CCAGGCAGCAGAACTCGGCCAAGGCGCGCTCGGTGT...AAACTCAGAGCAAGTGACCGAGGGAGGACACGGCTCCTGCCACTGAGGCCGGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CCCGAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGGCAGCCGTAGCTGGCTaGCCCGCTGCTCCCACACCG +
Preference number: 4 (lower is better)
Translates to: PEGRLPRVDDKTHPLEHTAAVAG*PAAPTP
Trigger: CGGTGTGGGAGCAGCGGGCCAGCCAGCTACGGCTGC...CGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTCGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GCTTGCCTGAGTGAGCATTCGCTGACACTGGCGGGCTGCACAAGCCACGACTGTGCAGCCGTAGCTGGCTaGCCCGCTGCTCCCACACCG +
Preference number: 4 (lower is better)
Translates to: ACLSEHSLTLAGCTSHDCAAVAG*PAAPTP
Trigger: CGGTGTGGGAGCAGCGGGCCAGCCAGCTACGGCTGC...ACAGTCGTGGCTTGTGCAGCCCGCCAGTGTCAGCGAATGCTCACTCAGGCAAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CCACGTGAAGGGTGCTCCCCACAGGACGCAGAGCTCCTCACAACGGCTCCAAGCTTCTGCAGCCGTAGCTaGCTGGCCCGCTGCTCCCAC +
Preference number: 4 (lower is better)
Translates to: PREGCSPQDAELLTTAPSFCSRS*LARCSH
Trigger: GTGGGAGCAGCGGGCCAGCCAGCTACGGCTGCAGAA...GCTTGGAGCCGTTGTGAGGAGCTCTGCGTCCTGTGGGGAGCACCCTTCACGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GCTGCATGCAGGCGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTCTTGGTATGTCGGGCCGCAGGTaGCGCGTAGTGGCGAAGCGC +
Preference number: 4 (lower is better)
Translates to: AACRRLSGHGAASTSGLGMSGRR*RVVAKR
Trigger: GCGCTTCGCCACTACGCGCCACCTGCGGCCCGACAT...ACCAAGACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACGCCTGCATGCAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp TCCAGGGAGGACAGAGCTTGCCTGAGTGAGCATTCGCTGACACTGGCGGGCTGCATGTCGGGCCGCAGGTaGCGCGTAGTGGCGAAGCGC +
Preference number: 4 (lower is better)
Translates to: SREDRACLSEHSLTLAGCMSGRR*RVVAKR
Trigger: GCGCTTCGCCACTACGCGCCACCTGCGGCCCGACAT...GCAGCCCGCCAGTGTCAGCGAATGCTCACTCAGGCAAGCTCTGTCCTCCCTGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CGGTTTAGGGTCTGGTGTGTGGTACGAGACCCAGGAAGGCAGGACAGGAAGGGGTTGTCGCGGTGCCGGTaGTGCCTGCGCGGAGGGTCG +
Preference number: 4 (lower is better)
Translates to: RFRVWCVVRDPGRQDRKGLSRCR*CLRGGS
Trigger: CGACCCTCCGCGCAGGCACCACCGGCACCGCGACAA...CCCCTTCCTGTCCTGCCTTCCTGGGTCTCGTACCACACACCAGACCCTAAACCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp TTGGTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGCCACCCGAGCTGAGTCCCAGCTCCAGGTCACAGTGTaGCTCCCGGGGCTGGTGGTT +
Preference number: 4 (lower is better)
Translates to: LVRVVVAVPCSATRAESQLQVTV*LPGLVV
Trigger: AACCACCAGCCCCGGGAGCCACACTGTGACCTGGAG...CTGGGACTCAGCTCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGACCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp CACAGGAGCCTCACCAAGGTGGGCAAGGCCTCCCCCGAGGGCCGGCTGCCCCGTCCTGCTCCTCATAGGTaGCATCCACGGAGTGTTTCA +
Preference number: 4 (lower is better)
Translates to: HRSLTKVGKASPEGRLPRPAPHR*HPRSVS
Trigger: TGAAACACTCCGTGGATGCCACCTATGAGGAGCAGG...ACGGGGCAGCCGGCCCTCGGGGGAGGCCTTGCCCACCTTGGTGAGGCTCCTGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CCCCTCCGTCCCGAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCGTGGCCTTCAGAGGGTaGAACAGGGACACAGGACCC +
Preference number: 4 (lower is better)
Translates to: PLRPEVSAHFQVGPASLCVAFRG*NRDTGP
Trigger: GGGTCCTGTGTCCCTGTTCCACCCTCTGAAGGCCAC...GCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTCGGGACGGAGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp TGGCGCCAGGACAGTGCTGGGCATCAGGTGCCCGGCCTCAGTGGCAGGAGCCGTGTGTCTGCTCCAGGGTaGCCTTCAGAGGGTGGAACA +
Preference number: 4 (lower is better)
Translates to: WRQDSAGHQVPGLSGRSRVSAPG*PSEGGT
Trigger: TGTTCCACCCTCTGAAGGCCACCCTGGAGCAGACAC...ACGGCTCCTGCCACTGAGGCCGGGCACCTGATGCCCAGCACTGTCCTGGCGCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CCCGAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGGCCACGCTCCAGGGGTaGCCTGGCCTCATGGGGTGC +
Preference number: 4 (lower is better)
Translates to: PEGRLPRVDDKTHPLEHTATLQG*PGLMGC
Trigger: GCACCCCATGAGGCCAGGCCACCCCTGGAGCGTGGC...CGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTCGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GCCCGGCCTCAGTGGCAGGAGCCGTGTCCTCCCTCGGTCACTTGCTCTGAGTTTGCCGCTGGGCCAGCGTaGAGATGGAGCGCTTCATGG +
Preference number: 4 (lower is better)
Translates to: ARPQWQEPCPPSVTCSEFAAGPA*RWSASW
Trigger: CCATGAAGCGCTCCATCTCCACGCTGGCCCAGCGGC...AAACTCAGAGCAAGTGACCGAGGGAGGACACGGCTCCTGCCACTGAGGCCGGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GCTGAGTCCCAGGGTGCAGTGGTAACCGTTGGGCACGCGGCGGAGAGGGTGAGAGTGGGCGGTCCGGGGTaGTGCTGCAAAGATGAGTCC +
Preference number: 4 (lower is better)
Translates to: AESQGAVVTVGHAAERVRVGGPG*CCKDES
Trigger: GGACTCATCTTTGCAGCACCACCCCGGACCGCCCAC...TCTCACCCTCTCCGCCGCGTGCCCAACGGTTACCACTGCACCCTGGGACTCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp ACGCCTGCTGCATGCAGGCGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTCAGCGGTGGTGGTGGTaGTGCGACGACGCCTGGCTA +
Preference number: 4 (lower is better)
Translates to: TPAACRRLSGHGAASTSGQRWWW*CDDAWL
Trigger: TAGCCAGGCGTCGTCGCACCACCACCACCACCGCTG...ACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACGCCTGCATGCAGCAGGCGT
66% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp GCTGAGTCCCAGGGTGCAGTGGTAACCGTTGGGCACGCGGCGGAGAGGGTGAGAAGCTGTTGGCGACGTTaGGTGGCTGCTGAGGGAGGG +
Preference number: 4 (lower is better)
Translates to: AESQGAVVTVGHAAERVRSCWRR*VAAEGG
Trigger: CCCTCCCTCAGCAGCCACCCAACGTCGCCAACAGCT...TCTCACCCTCTCCGCCGCGTGCCCAACGGTTACCACTGCACCCTGGGACTCAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp GCACCAGTGGTCTTGGTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGCCACCCGAAGCGGCCCGAGTTGGTaGCCACAGCCTCCTCGAAAG +
Preference number: 4 (lower is better)
Translates to: APVVLVRVVVAVPCSATRSGPSW*PQPPRK
Trigger: CTTTCGAGGAGGCTGTGGCCACCAACTCGGGCCGCT...TCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGACCAAGACCACTGGTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp AGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGTAGCGGCCCGAGTTGGTaGCCACAGCCTCCTCGAAAG +
Preference number: 4 (lower is better)
Translates to: RSRRTFRWALLLCAARPRSGPSW*PQPPRK
Trigger: CTTTCGAGGAGGCTGTGGCCACCAACTCGGGCCGCT...ACGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CCACGTGAAGGGTGCTCCCCACAGGACGCAGAGCTCCTCACAACGGCTCCAAGCAGGAGCGGCCCGAGTTaGTGGCCACAGCCTCCTCGA +
Preference number: 4 (lower is better)
Translates to: PREGCSPQDAELLTTAPSRSGPS*WPQPPR
Trigger: TCGAGGAGGCTGTGGCCACCAACTCGGGCCGCTCCT...GCTTGGAGCCGTTGTGAGGAGCTCTGCGTCCTGTGGGGAGCACCCTTCACGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CCCGAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGGGAGTCAGGGGCGTCTaGGGGAGCTGCCTCCGCCCA +
Preference number: 4 (lower is better)
Translates to: PEGRLPRVDDKTHPLEHTGVRGV*GSCLRP
Trigger: TGGGCGGAGGCAGCTCCCCCAGACGCCCCTGACTCC...CGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTCGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp AGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGTCTGGGTGTGAGGGCCTaGCGGTCAGGCACTTGGTCA +
Preference number: 4 (lower is better)
Translates to: RSRRTFRWALLLCAARPRLGVRA*RSGTWS
Trigger: TGACCAAGTGCCTGACCGCCAGGCCCTCACACCCAG...ACGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GCTTGCCTGAGTGAGCATTCGCTGACACTGGCGGGCTGCACAAGCCACGACTGTGGTGCCCGGCCTCAGTaGCAGGAGCCGTGTCCTCCC +
Preference number: 4 (lower is better)
Translates to: ACLSEHSLTLAGCTSHDCGARPQ*QEPCPP
Trigger: GGGAGGACACGGCTCCTGCCACTGAGGCCGGGCACC...ACAGTCGTGGCTTGTGCAGCCCGCCAGTGTCAGCGAATGCTCACTCAGGCAAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp ACCCGAGCTGAGTCCCAGGGTGCAGTGGTAACCGTTGGGCACGCGGCGGAGAGGTGGCAAGGATCCCTGTaGGGACGACCACGAAGTCCA +
Preference number: 4 (lower is better)
Translates to: TRAESQGAVVTVGHAAERWQGSL*GRPRSP
Trigger: TGGACTTCGTGGTCGTCCTCACAGGGATCCTTGCCA...CCTCTCCGCCGCGTGCCCAACGGTTACCACTGCACCCTGGGACTCAGCTCGGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR TCA 90 bp CCCCTCCGTCCCGAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCTGGCAAGGATCCCTGTaGGGACGACCACGAAGTCCA +
Preference number: 4 (lower is better)
Translates to: PLRPEVSAHFQVGPASLCWQGSL*GRPRSP
Trigger: TGGACTTCGTGGTCGTCCTCACAGGGATCCTTGCCA...GCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTCGGGACGGAGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp CCCGAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCTGTCTTCCCGCTCTTaGGGCTGGCGCGGGCGAAGG +
Preference number: 4 (lower is better)
Translates to: PEGRLPRVDDKTHPLEHTLSSRS*GWRGRR
Trigger: CCTTCGCCCGCGCCAGCCTCAAGAGCGGGAAGACAG...CGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GTGCAGCTAGCACCAGTGGTCTTGGTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGGGCCCGCAGCACACTaGTCCCAAAGGAGCTTCCCG +
Preference number: 4 (lower is better)
Translates to: VQLAPVVLVRVVVAVPCSGPAAH*SQRSFP
Trigger: CGGGAAGCTCCTTTGGGATCAGTGTGCTGCGGGCCC...CGAGCACGGCACAGCTACCACCACCCTGACCAAGACCACTGGTGCTAGCTGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR TCA 90 bp GCTGAGTCCCAGGGTGCAGTGGTAACCGTTGGGCACGCGGCGGAGAGGGTGAGAGGATCTGGAAGACAGTaGGGATGGCGGCAGGGAAGG +
Preference number: 4 (lower is better)
Translates to: AESQGAVVTVGHAAERVRGSGRQ*GWRQGR
Trigger: CCTTCCCTGCCGCCATCCTCACTGTCTTCCAGATCC...TCTCACCCTCTCCGCCGCGTGCCCAACGGTTACCACTGCACCCTGGGACTCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR TCA 90 bp CACAGGAGCCTCACCAAGGTGGGCAAGGCCTCCCCCGAGGGCCGGCTGCCCCGTTGCGATTCGATCCCGTaGTACATCACTGCATTCCAG +
Preference number: 4 (lower is better)
Translates to: HRSLTKVGKASPEGRLPRCDSIP*YITAFQ
Trigger: CTGGAATGCAGTGATGTATCACGGGATCGAATCGCA...ACGGGGCAGCCGGCCCTCGGGGGAGGCCTTGCCCACCTTGGTGAGGCTCCTGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GCCCGGCCTCAGTGGCAGGAGCCGTGTCCTCCCTCGGTCACTTGCTCTGAGTTTTTCTCCACAGCCTCGTaGGCAGGCTGCGCCTTGTGC +
Preference number: 4 (lower is better)
Translates to: ARPQWQEPCPPSVTCSEFFSTAS*AGCALC
Trigger: GCACAAGGCGCAGCCTGCTCACGAGGCTGTGGAGAA...AAACTCAGAGCAAGTGACCGAGGGAGGACACGGCTCCTGCCACTGAGGCCGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGCCACCCGAGCTGAGTCCCAGGGTCGAGTGACGTTCCGCTaGTTGTCTGCATCCTCTGGC +
Preference number: 4 (lower is better)
Translates to: VRVVVAVPCSATRAESQGRVTFR*LSASSG
Trigger: GCCAGAGGATGCAGACAATCAGCGGAACGTCACTCG...ACCCTGGGACTCAGCTCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR TCA 90 bp GAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGGACTGCCCATGCGAGTaGCGTTCCGCTGATTGTCTG +
Preference number: 4 (lower is better)
Translates to: EVSAHFQVGPASLCRTATDCPCE*RSADCL
Trigger: CAGACAATCAGCGGAACGTCACTCGCATGGGCAGTC...CGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GCTGCATGCAGGCGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTCTTGGTTTCGGGTCTGGGGGCTaGCTGCCCATGCGAGTGACG +
Preference number: 4 (lower is better)
Translates to: AACRRLSGHGAASTSGLGFGSGG*LPMRVT
Trigger: CGTCACTCGCATGGGCAGTCAGCCCCCAGACCCGAA...ACCAAGACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACGCCTGCATGCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR TCA 90 bp CACAGGAGCCTCACCAAGGTGGGCAAGGCCTCCCCCGAGGGCCGGCTGCCCCGTTTTCCCTTTGGATCCTaGGAAAGCAAACGCCACCAG +
Preference number: 4 (lower is better)
Translates to: HRSLTKVGKASPEGRLPRFPFGS*ESKRHQ
Trigger: CTGGTGGCGTTTGCTTTCTCAGGATCCAAAGGGAAA...ACGGGGCAGCCGGCCCTCGGGGGAGGCCTTGCCCACCTTGGTGAGGCTCCTGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp TGGCGCCAGGACAGTGCTGGGCATCAGGTGCCCGGCCTCAGTGGCAGGAGCCGTGCACCCCAAAGGCGATaGTCTTCAGCACGCATTCCA +
Preference number: 4 (lower is better)
Translates to: WRQDSAGHQVPGLSGRSRAPQRR*SSARIP
Trigger: TGGAATGCGTGCTGAAGATCATCGCCTTTGGGGTGC...ACGGCTCCTGCCACTGAGGCCGGGCACCTGATGCCCAGCACTGTCCTGGCGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp CCTGCTGCATGCAGGCGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTCTTCCTGGCGGAGCAGCTTaGTCAGCCGCGCAGCTCGAA +
Preference number: 4 (lower is better)
Translates to: PAACRRLSGHGAASTSGLPGGAA*SAAQLE
Trigger: TTCGAGCTGCGCGGCTGATCAAGCTGCTCCGCCAGG...AAGACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACGCCTGCATGCAGCAGG
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR TCA 90 bp TCCAGGGAGGACAGAGCTTGCCTGAGTGAGCATTCGCTGACACTGGCGGGCTGCCCTGGCGGAGCAGCTTaGTCAGCCGCGCAGCTCGAA +
Preference number: 4 (lower is better)
Translates to: SREDRACLSEHSLTLAGCPGGAA*SAAQLE
Trigger: TTCGAGCTGCGCGGCTGATCAAGCTGCTCCGCCAGG...GCAGCCCGCCAGTGTCAGCGAATGCTCACTCAGGCAAGCTCTGTCCTCCCTGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp TGGCGCCAGGACAGTGCTGGGCATCAGGTGCCCGGCCTCAGTGGCAGGAGCCGTAACTCCGCGTCACACTaGTGCTGCTTTGTCCCAGCT +
Preference number: 4 (lower is better)
Translates to: WRQDSAGHQVPGLSGRSRNSASH*CCFVPA
Trigger: AGCTGGGACAAAGCAGCATCAGTGTGACGCGGAGTT...ACGGCTCCTGCCACTGAGGCCGGGCACCTGATGCCCAGCACTGTCCTGGCGCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GCGGTCACGGTGCAGCTAGCACCAGTGGTCTTGGTCAGGGTGGTGGTAGCTGTGACGTTGGGTGGCTGCTaGGGGAGGGCTTGGGCTTCG +
Preference number: 4 (lower is better)
Translates to: AVTVQLAPVVLVRVVVAVTLGGC*GRAWAS
Trigger: CGAAGCCCAAGCCCTCCCTCAGCAGCCACCCAACGT...CACAGCTACCACCACCCTGACCAAGACCACTGGTGCTAGCTGCACCGTGACCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR TCA 90 bp GCTGAGTCCCAGGGTGCAGTGGTAACCGTTGGGCACGCGGCGGAGAGGGTGAGACAGCCTCCTCGAAAGTaGGAGTGTCCTCAGGCAGGG +
Preference number: 4 (lower is better)
Translates to: AESQGAVVTVGHAAERVRQPPRK*ECPQAG
Trigger: CCCTGCCTGAGGACACTCTCACTTTCGAGGAGGCTG...TCTCACCCTCTCCGCCGCGTGCCCAACGGTTACCACTGCACCCTGGGACTCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR TCA 90 bp CGGTTTAGGGTCTGGTGTGTGGTACGAGACCCAGGAAGGCAGGACAGGAAGGGGCTCGGCCACCCGAGCTaGGTCCCAGGGTGCAGTGGT +
Preference number: 4 (lower is better)
Translates to: RFRVWCVVRDPGRQDRKGLGHPS*VPGCSG
Trigger: ACCACTGCACCCTGGGACTCAGCTCGGGTGGCCGAG...CCCCTTCCTGTCCTGCCTTCCTGGGTCTCGTACCACACACCAGACCCTAAACCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GCTTGCCTGAGTGAGCATTCGCTGACACTGGCGGGCTGCACAAGCCACGACTGTCTCGGCCACCCGAGCTaGGTCCCAGGGTGCAGTGGT +
Preference number: 4 (lower is better)
Translates to: ACLSEHSLTLAGCTSHDCLGHPS*VPGCSG
Trigger: ACCACTGCACCCTGGGACTCAGCTCGGGTGGCCGAG...ACAGTCGTGGCTTGTGCAGCCCGCCAGTGTCAGCGAATGCTCACTCAGGCAAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GCCCGGCCTCAGTGGCAGGAGCCGTGTCCTCCCTCGGTCACTTGCTCTGAGTTTCTGCATGCAGGCGTCTaGGCGGTCACGGTGCAGCTA +
Preference number: 4 (lower is better)
Translates to: ARPQWQEPCPPSVTCSEFLHAGV*AVTVQL
Trigger: TAGCTGCACCGTGACCGCTCAGACGCCTGCATGCAG...AAACTCAGAGCAAGTGACCGAGGGAGGACACGGCTCCTGCCACTGAGGCCGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp TGGCGCCAGGACAGTGCTGGGCATCAGGTGCCCGGCCTCAGTGGCAGGAGCCGTGCTAGCACCAGATGTTaGCAGCAAGGGGCTCCCATT +
Preference number: 4 (lower is better)
Translates to: WRQDSAGHQVPGLSGRSRASTRC*QQGAPI
Trigger: AATGGGAGCCCCTTGCTGTCAACATCTGGTGCTAGC...ACGGCTCCTGCCACTGAGGCCGGGCACCTGATGCCCAGCACTGTCCTGGCGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp TGGCGCCAGGACAGTGCTGGGCATCAGGTGCCCGGCCTCAGTGGCAGGAGCCGTCTCGGTCACTTGCTCTaGGTTTCATTCCAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: WRQDSAGHQVPGLSGRSRLGHLL*VSFQLG
Trigger: CCCCAGCTGGAATGAAACTCAGAGCAAGTGACCGAG...ACGGCTCCTGCCACTGAGGCCGGGCACCTGATGCCCAGCACTGTCCTGGCGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp AGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGTGGGTCAGACCTCACTTaGCTGCCTGCTCCCTGTGTC +
Preference number: 4 (lower is better)
Translates to: RSRRTFRWALLLCAARPRGSDLT*LPAPCV
Trigger: GACACAGGGAGCAGGCAGTCAAGTGAGGTCTGACCC...ACGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GCGGTCACGGTGCAGCTAGCACCAGTGGTCTTGGTCAGGGTGGTGGTAGCTGTGGGGCTGGGGCCTCCTTaGCACAGGGGAAGTCACCCA +
Preference number: 4 (lower is better)
Translates to: AVTVQLAPVVLVRVVVAVGLGPP*HRGSHP
Trigger: TGGGTGACTTCCCCTGTGGCAAGGAGGCCCCAGCCC...CACAGCTACCACCACCCTGACCAAGACCACTGGTGCTAGCTGCACCGTGACCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR GCA 90 bp CCACGTGAAGGGTGCTCCCCACAGGACGCAGAGCTCCTCACAACGGCTCCAAGCTCTCGCTCGATCTGCTaGTGCCGGCGCAGCTTCAGG +
Preference number: 4 (lower is better)
Translates to: PREGCSPQDAELLTTAPSSRSIC*CRRSFR
Trigger: CCTGAAGCTGCGCCGGCAGCAGCAGATCGAGCGAGA...GCTTGGAGCCGTTGTGAGGAGCTCTGCGTCCTGTGGGGAGCACCCTTCACGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGAGGGGACTTCTCCTCTaGATTCCTGTCCTCCTCGGC +
Preference number: 4 (lower is better)
Translates to: EVSAHFQVGPASLCRTATRGLLL*IPVLLG
Trigger: GCCGAGGAGGACAGGAATGCAGAGGAGAAGTCCCCT...CGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GCTTGCCTGAGTGAGCATTCGCTGACACTGGCGGGCTGCACAAGCCACGACTGTTTGCTCGGATCCTGGTaGCGGTGCGCGCGGTGGCGT +
Preference number: 4 (lower is better)
Translates to: ACLSEHSLTLAGCTSHDCLLGSW*RCARWR
Trigger: ACGCCACCGCGCGCACCGGCACCAGGATCCGAGCAA...ACAGTCGTGGCTTGTGCAGCCCGCCAGTGTCAGCGAATGCTCACTCAGGCAAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp ACCCGAGCTGAGTCCCAGGGTGCAGTGGTAACCGTTGGGCACGCGGCGGAGAGGGTGCTGGGCAGTGTGTaGATGGGACCCACAGTCACA +
Preference number: 4 (lower is better)
Translates to: TRAESQGAVVTVGHAAERVLGSV*MGPTVT
Trigger: TGTGACTGTGGGTCCCATGCACACACTGCCCAGCAC...CCTCTCCGCCGCGTGCCCAACGGTTACCACTGCACCCTGGGACTCAGCTCGGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR GCA 90 bp GAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGGTGCTGGGCAGTGTGTaGATGGGACCCACAGTCACA +
Preference number: 4 (lower is better)
Translates to: EVSAHFQVGPASLCRTATVLGSV*MGPTVT
Trigger: TGTGACTGTGGGTCCCATGCACACACTGCCCAGCAC...CGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGCCTTCTGGAGACAGGTaGTGGGCAGTGTGTGCATGG +
Preference number: 4 (lower is better)
Translates to: EVSAHFQVGPASLCRTATPSGDR*WAVCAW
Trigger: CCATGCACACACTGCCCAGCACCTGTCTCCAGAAGG...CGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp ACCCGAGCTGAGTCCCAGGGTGCAGTGGTAACCGTTGGGCACGCGGCGGAGAGGCAGCTTGATCTCCAGTaGCGTCCGGATGAGGGCCAT +
Preference number: 4 (lower is better)
Translates to: TRAESQGAVVTVGHAAERQLDLQ*RPDEGH
Trigger: ATGGCCCTCATCCGGACGGCACTGGAGATCAAGCTG...CCTCTCCGCCGCGTGCCCAACGGTTACCACTGCACCCTGGGACTCAGCTCGGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR GCA 90 bp GCTGTGCCGTGCTCGGCCACCCGAGCTGAGTCCCAGGGTGCAGTGGTAACCGTTAGGCCTCCAGGAGCCTaGTGCATCTGGTCTCTGGTG +
Preference number: 4 (lower is better)
Translates to: AVPCSATRAESQGAVVTVRPPGA*CIWSLV
Trigger: CACCAGAGACCAGATGCAGCAGGCTCCTGGAGGCCT...AACGGTTACCACTGCACCCTGGGACTCAGCTCGGGTGGCCGAGCACGGCACAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR GCA 90 bp GTCTTGGTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGCCACCCGAGCTGAGTCCACAGCCGGCTGTGTCTaGTCCAGGGTGGCCTTCAGA +
Preference number: 4 (lower is better)
Translates to: VLVRVVVAVPCSATRAESTAGCV*SRVAFR
Trigger: TCTGAAGGCCACCCTGGAGCAGACACAGCCGGCTGT...GGACTCAGCTCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGACCAAGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR GCA 90 bp CCACGTGAAGGGTGCTCCCCACAGGACGCAGAGCTCCTCACAACGGCTCCAAGCGGCGGTCCGGGGTGGTaGTGCAAAGATGAGTCCCAC +
Preference number: 4 (lower is better)
Translates to: PREGCSPQDAELLTTAPSGGPGW*CKDESH
Trigger: GTGGGACTCATCTTTGCAGCACCACCCCGGACCGCC...GCTTGGAGCCGTTGTGAGGAGCTCTGCGTCCTGTGGGGAGCACCCTTCACGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GCTTGCCTGAGTGAGCATTCGCTGACACTGGCGGGCTGCACAAGCCACGACTGTCGGTGGTGGTGGTGGTaGGACGACGCCTGGCTAGGG +
Preference number: 4 (lower is better)
Translates to: ACLSEHSLTLAGCTSHDCRWWWW*DDAWLG
Trigger: CCCTAGCCAGGCGTCGTCGCACCACCACCACCACCG...ACAGTCGTGGCTTGTGCAGCCCGCCAGTGTCAGCGAATGCTCACTCAGGCAAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp CGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTCTTGGTCAGGGTGGTGGTTCTGCTTCCTGTCCCTaGGGCGGTGGCAGCGGTGGT +
Preference number: 4 (lower is better)
Translates to: RLSGHGAASTSGLGQGGGSASCP*GGGSGG
Trigger: ACCACCGCTGCCACCGCCGCAGGGACAGGAAGCAGA...ACCACCACCCTGACCAAGACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR GCA 90 bp TCGGCCACCCGAGCTGAGTCCCAGGGTGCAGTGGTAACCGTTGGGCACGCGGCGCACAGCACTGCTTGGTaGGCCATCCATATCGGCAGA +
Preference number: 4 (lower is better)
Translates to: SATRAESQGAVVTVGHAAHSTAW*AIHIGR
Trigger: TCTGCCGATATGGATGGCGCACCAAGCAGTGCTGTG...CGCCGCGTGCCCAACGGTTACCACTGCACCCTGGGACTCAGCTCGGGTGGCCGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR GCA 90 bp TTGGTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGCCACCCGAGCTGAGTCCCAGCCGGCCCCACAGCACTaGTTGGTGCGCCATCCATAT +
Preference number: 4 (lower is better)
Translates to: LVRVVVAVPCSATRAESQPAPQH*LVRHPY
Trigger: ATATGGATGGCGCACCAAGCAGTGCTGTGGGGCCGG...CTGGGACTCAGCTCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGACCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR GCA 90 bp GCGGTCACGGTGCAGCTAGCACCAGTGGTCTTGGTCAGGGTGGTGGTAGCTGTGGTGGTAGCTGTGCCGTaGTCGGCCACCCGAGCTGAG +
Preference number: 4 (lower is better)
Translates to: AVTVQLAPVVLVRVVVAVVVAVP*SATRAE
Trigger: CTCAGCTCGGGTGGCCGAGCACGGCACAGCTACCAC...CACAGCTACCACCACCCTGACCAAGACCACTGGTGCTAGCTGCACCGTGACCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR GCA 90 bp ACGCCTGCTGCATGCAGGCGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTCACACGCCTGCTGCATaGAGGCGTCTGAGCGGTCAC +
Preference number: 4 (lower is better)
Translates to: TPAACRRLSGHGAASTSGHTPAA*RRLSGH
Trigger: GTGACCGCTCAGACGCCTGCATGCAGCAGGCGTGTG...ACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACGCCTGCATGCAGCAGGCGT
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR GCA 90 bp GCCCGGCCTCAGTGGCAGGAGCCGTGTCCTCCCTCGGTCACTTGCTCTGAGTTTTGGACCGGACAGGGCTaGACAGGGAGTCTCCTCGCA +
Preference number: 4 (lower is better)
Translates to: ARPQWQEPCPPSVTCSEFWTGQG*TGSLLA
Trigger: TGCGAGGAGACTCCCTGTGCAGCCCTGTCCGGTCCA...AAACTCAGAGCAAGTGACCGAGGGAGGACACGGCTCCTGCCACTGAGGCCGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GCCCGGCCTCAGTGGCAGGAGCCGTGTCCTCCCTCGGTCACTTGCTCTGAGTTTCCACTGGCAAGGGCTTaGTACCTGGCTGCCATCGCG +
Preference number: 4 (lower is better)
Translates to: ARPQWQEPCPPSVTCSEFPLARA*YLAAIA
Trigger: CGCGATGGCAGCCAGGTAGCAAGCCCTTGCCAGTGG...AAACTCAGAGCAAGTGACCGAGGGAGGACACGGCTCCTGCCACTGAGGCCGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp CGGTTTAGGGTCTGGTGTGTGGTACGAGACCCAGGAAGGCAGGACAGGAAGGGGGGGCTTCCTCCCTCCTaGCCTGACGGCCCCACATCC +
Preference number: 4 (lower is better)
Translates to: RFRVWCVVRDPGRQDRKGGLPPS*PDGPTS
Trigger: GGATGTGGGGCCGTCAGGGCAGGAGGGAGGAAGCCC...CCCCTTCCTGTCCTGCCTTCCTGGGTCTCGTACCACACACCAGACCCTAAACCG
64% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGCTCGCACAGCCGGGCTaGGGCCTCCTTGCCACAGGG +
Preference number: 4 (lower is better)
Translates to: AGCPVWMIKLIHWNTRLLLAQPG*GLLATG
Trigger: CCCTGTGGCAAGGAGGCCCCAGCCCGGCTGTGCGAG...CAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp TTGGTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGCCACCCGAGCTGAGTCCCAGGCCAAAGTTGGGTCCTaGCCAGTACTCCCGGCACTC +
Preference number: 4 (lower is better)
Translates to: LVRVVVAVPCSATRAESQAKVGS*PVLPAL
Trigger: GAGTGCCGGGAGTACTGGCCAGGACCCAACTTTGGC...CTGGGACTCAGCTCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGACCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp ACGCCTGCTGCATGCAGGCGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTGCTGCCTGGCGGCGATaGAGATGTTCGCGGCAGACA +
Preference number: 4 (lower is better)
Translates to: TPAACRRLSGHGAASTSGAAWRR*RCSRQT
Trigger: TGTCTGCCGCGAACATCTCCATCGCCGCCAGGCAGC...ACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACGCCTGCATGCAGCAGGCGT
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp TTGGTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGCCACCCGAGCTGAGTCCCAGCCGAGTTCTGCTGCCTaGCGGCGATGGAGATGTTCG +
Preference number: 4 (lower is better)
Translates to: LVRVVVAVPCSATRAESQPSSAA*RRWRCS
Trigger: CGAACATCTCCATCGCCGCCAGGCAGCAGAACTCGG...CTGGGACTCAGCTCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGACCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp GAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCAGCCGTAGCTGGCTaGCCCGCTGCTCCCACACCG +
Preference number: 4 (lower is better)
Translates to: EGRLPRVDDKTHPLEHTPAAVAG*PAAPTP
Trigger: CGGTGTGGGAGCAGCGGGCCAGCCAGCTACGGCTGC...AGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GCTGCATGCAGGCGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTCTTGGTTTCTGCAGCCGTAGCTaGCTGGCCCGCTGCTCCCAC +
Preference number: 4 (lower is better)
Translates to: AACRRLSGHGAASTSGLGFCSRS*LARCSH
Trigger: GTGGGAGCAGCGGGCCAGCCAGCTACGGCTGCAGAA...ACCAAGACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACGCCTGCATGCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp CGGTTTAGGGTCTGGTGTGTGGTACGAGACCCAGGAAGGCAGGACAGGAAGGGGATGTCGGGCCGCAGGTaGCGCGTAGTGGCGAAGCGC +
Preference number: 4 (lower is better)
Translates to: RFRVWCVVRDPGRQDRKGMSGRR*RVVAKR
Trigger: GCGCTTCGCCACTACGCGCCACCTGCGGCCCGACAT...CCCCTTCCTGTCCTGCCTTCCTGGGTCTCGTACCACACACCAGACCCTAAACCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp ACCCGAGCTGAGTCCCAGGGTGCAGTGGTAACCGTTGGGCACGCGGCGGAGAGGTCTGGAGACAGGTGCTaGGCAGTGTGTGCATGGGAC +
Preference number: 4 (lower is better)
Translates to: TRAESQGAVVTVGHAAERSGDRC*AVCAWD
Trigger: GTCCCATGCACACACTGCCCAGCACCTGTCTCCAGA...CCTCTCCGCCGCGTGCCCAACGGTTACCACTGCACCCTGGGACTCAGCTCGGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp GCGGTCACGGTGCAGCTAGCACCAGTGGTCTTGGTCAGGGTGGTGGTAGCTGTGCACTGGGAACGACCGTaGCTTCCCCAAGAGGGCCCG +
Preference number: 4 (lower is better)
Translates to: AVTVQLAPVVLVRVVVAVHWERP*LPQEGP
Trigger: CGGGCCCTCTTGGGGAAGCCACGGTCGTTCCCAGTG...CACAGCTACCACCACCCTGACCAAGACCACTGGTGCTAGCTGCACCGTGACCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp TTGGTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGCCACCCGAGCTGAGTCCCAGGAACATGGAGCTGTATaGGACGATAGGCCGGGGGCC +
Preference number: 4 (lower is better)
Translates to: LVRVVVAVPCSATRAESQEHGAV*DDRPGA
Trigger: GGCCCCCGGCCTATCGTCCCATACAGCTCCATGTTC...CTGGGACTCAGCTCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGACCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp TCGGCCACCCGAGCTGAGTCCCAGGGTGCAGTGGTAACCGTTGGGCACGCGGCGGGCGGAGCAGGTTGGTaGGGCTTAAACAGAACATGG +
Preference number: 4 (lower is better)
Translates to: SATRAESQGAVVTVGHAAGGAGW*GLNRTW
Trigger: CCATGTTCTGTTTAAGCCCCACCAACCTGCTCCGCC...CGCCGCGTGCCCAACGGTTACCACTGCACCCTGGGACTCAGCTCGGGTGGCCGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp GCGGTCACGGTGCAGCTAGCACCAGTGGTCTTGGTCAGGGTGGTGGTAGCTGTGCGAGTCTGTGCGCACTaGGTCCTCAGCAGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: AVTVQLAPVVLVRVVVAVRVCAH*VLSSQG
Trigger: GCCCTGGCTGCTGAGGACCCAGTGCGCACAGACTCG...CACAGCTACCACCACCCTGACCAAGACCACTGGTGCTAGCTGCACCGTGACCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp TCCAGGGAGGACAGAGCTTGCCTGAGTGAGCATTCGCTGACACTGGCGGGCTGCCGAGTCTGTGCGCACTaGGTCCTCAGCAGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: SREDRACLSEHSLTLAGCRVCAH*VLSSQG
Trigger: GCCCTGGCTGCTGAGGACCCAGTGCGCACAGACTCG...GCAGCCCGCCAGTGTCAGCGAATGCTCACTCAGGCAAGCTCTGTCCTCCCTGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp ACCCGAGCTGAGTCCCAGGGTGCAGTGGTAACCGTTGGGCACGCGGCGGAGAGGAGTGTTTCAGCACCATaGGCCAGCCTTCTCCCGTGG +
Preference number: 4 (lower is better)
Translates to: TRAESQGAVVTVGHAAERSVSAP*ASLLPW
Trigger: CCACGGGAGAAGGCTGGCCCATGGTGCTGAAACACT...CCTCTCCGCCGCGTGCCCAACGGTTACCACTGCACCCTGGGACTCAGCTCGGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp CACAGGAGCCTCACCAAGGTGGGCAAGGCCTCCCCCGAGGGCCGGCTGCCCCGTCAGTCATGTCCTCGTTaGAGATGGGCATGTTCATGC +
Preference number: 4 (lower is better)
Translates to: HRSLTKVGKASPEGRLPRQSCPR*RWACSC
Trigger: GCATGAACATGCCCATCTCCAACGAGGACATGACTG...ACGGGGCAGCCGGCCCTCGGGGGAGGCCTTGCCCACCTTGGTGAGGCTCCTGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CACAGGAGCCTCACCAAGGTGGGCAAGGCCTCCCCCGAGGGCCGGCTGCCCCGTATCTCATCAGGCTTATaGGGTGGTACCAGCAAGTCC +
Preference number: 4 (lower is better)
Translates to: HRSLTKVGKASPEGRLPRISSGL*GGTSKS
Trigger: GGACTTGCTGGTACCACCCCATAAGCCTGATGAGAT...ACGGGGCAGCCGGCCCTCGGGGGAGGCCTTGCCCACCTTGGTGAGGCTCCTGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp ACGCCTGCTGCATGCAGGCGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTGACACAGGACCCATCTaGGAGAGGCCTCCAGGAGCC +
Preference number: 4 (lower is better)
Translates to: TPAACRRLSGHGAASTSGDTGPI*ERPPGA
Trigger: GGCTCCTGGAGGCCTCTCCCAGATGGGTCCTGTGTC...ACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACGCCTGCATGCAGCAGGCGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp GCACCAGTGGTCTTGGTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGCCACCCGAGTGGCCTTCAGAGGGTaGAACAGGGACACAGGACCC +
Preference number: 4 (lower is better)
Translates to: APVVLVRVVVAVPCSATRVAFRG*NRDTGP
Trigger: GGGTCCTGTGTCCCTGTTCCACCCTCTGAAGGCCAC...TCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGACCAAGACCACTGGTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp CCACGTGAAGGGTGCTCCCCACAGGACGCAGAGCTCCTCACAACGGCTCCAAGCGGTGGCCTGGCCTCATaGGGTGCATCCTGGGTCCTT +
Preference number: 4 (lower is better)
Translates to: PREGCSPQDAELLTTAPSGGLAS*GASWVL
Trigger: AAGGACCCAGGATGCACCCCATGAGGCCAGGCCACC...GCTTGGAGCCGTTGTGAGGAGCTCTGCGTCCTGTGGGGAGCACCCTTCACGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTCTTGGTCAGGGTGGTGGTGCTCCAGGGGTGGCCTaGCCTCATGGGGTGCATCCT +
Preference number: 4 (lower is better)
Translates to: RLSGHGAASTSGLGQGGGAPGVA*PHGVHP
Trigger: AGGATGCACCCCATGAGGCCAGGCCACCCCTGGAGC...ACCACCACCCTGACCAAGACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp CCTGCTGCATGCAGGCGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTCTTGGGATCTCTGTGGAGTaGCCACGCTCCAGGGGTGGC +
Preference number: 4 (lower is better)
Translates to: PAACRRLSGHGAASTSGLGISVE*PRSRGG
Trigger: GCCACCCCTGGAGCGTGGCCACTCCACAGAGATCCC...AAGACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACGCCTGCATGCAGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp GTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCCCTTCCACTCGTGGGAGGAGGGGGATCTCTGTGGAGTaGCCACGCTCCAGGGGTGGC +
Preference number: 4 (lower is better)
Translates to: VVSCPVASLETPSTRGRRGISVE*PRSRGG
Trigger: GCCACCCCTGGAGCGTGGCCACTCCACAGAGATCCC...CCTCCTCCCACGAGTGGAAGGGGTTTCCAAGGAAGCCACAGGGCAGCTGACCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTCTTGGTCAGGGTGGTGGTGCCGCTGGGCCAGCGTaGAGATGGAGCGCTTCATGG +
Preference number: 4 (lower is better)
Translates to: RLSGHGAASTSGLGQGGGAAGPA*RWSASW
Trigger: CCATGAAGCGCTCCATCTCCACGCTGGCCCAGCGGC...ACCACCACCCTGACCAAGACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp GCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGTGGTGCGACGACGCCTaGCTAGGGGGTGGGCGGTCC +
Preference number: 4 (lower is better)
Translates to: AGCPVWMIKLIHWNTRLLWCDDA*LGGGRS
Trigger: GGACCGCCCACCCCCTAGCCAGGCGTCGTCGCACCA...CAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CCCGAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGTGGCAGCGGTGGTGGTaGTGGTGCGACGACGCCTGG +
Preference number: 4 (lower is better)
Translates to: PEGRLPRVDDKTHPLEHTWQRWW*WCDDAW
Trigger: CCAGGCGTCGTCGCACCACCACCACCACCGCTGCCA...CGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTCGGTGGCAGCGGTGGTaGTGGTGGTGCGACGACGCC +
Preference number: 4 (lower is better)
Translates to: EGRLPRVDDKTHPLEHTPRWQRW*WWCDDA
Trigger: GGCGTCGTCGCACCACCACCACCACCGCTGCCACCG...AGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CCTGCTGCATGCAGGCGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTCTTAGGAGCGGCCCGAGTTaGTGGCCACAGCCTCCTCGA +
Preference number: 4 (lower is better)
Translates to: PAACRRLSGHGAASTSGLRSGPS*WPQPPR
Trigger: TCGAGGAGGCTGTGGCCACCAACTCGGGCCGCTCCT...AAGACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACGCCTGCATGCAGCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp CCACGTGAAGGGTGCTCCCCACAGGACGCAGAGCTCCTCACAACGGCTCCAAGCTGCAGTGGTAACCGTTaGGCACGCGGCGGAGAGGGT +
Preference number: 4 (lower is better)
Translates to: PREGCSPQDAELLTTAPSCSGNR*ARGGEG
Trigger: ACCCTCTCCGCCGCGTGCCCAACGGTTACCACTGCA...GCTTGGAGCCGTTGTGAGGAGCTCTGCGTCCTGTGGGGAGCACCCTTCACGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGGAGTCAGGGGCGTCTaGGGGAGCTGCCTCCGCCCA +
Preference number: 4 (lower is better)
Translates to: EGRLPRVDDKTHPLEHTPGVRGV*GSCLRP
Trigger: TGGGCGGAGGCAGCTCCCCCAGACGCCCCTGACTCC...AGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GCCCGGCCTCAGTGGCAGGAGCCGTGTCCTCCCTCGGTCACTTGCTCTGAGTTTAGAAGGCAGGGAGGCTaGTCTGAGCCCCGGCGAAGT +
Preference number: 4 (lower is better)
Translates to: ARPQWQEPCPPSVTCSEFRRQGG*SEPRRS
Trigger: ACTTCGCCGGGGCTCAGACCAGCCTCCCTGCCTTCT...AAACTCAGAGCAAGTGACCGAGGGAGGACACGGCTCCTGCCACTGAGGCCGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp TGGCGCCAGGACAGTGCTGGGCATCAGGTGCCCGGCCTCAGTGGCAGGAGCCGTACACCCAAGATAACATaGGCTGGGGGCTGGGGAACA +
Preference number: 4 (lower is better)
Translates to: WRQDSAGHQVPGLSGRSRTPKIT*AGGWGT
Trigger: TGTTCCCCAGCCCCCAGCCCATGTTATCTTGGGTGT...ACGGCTCCTGCCACTGAGGCCGGGCACCTGATGCCCAGCACTGTCCTGGCGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR CAA 72 bp TCTCTCCTGAGCGTGGCCATGGGGGTCAGACCTCACTaGACTGCCTGCTCCCTGTGTCTGGCGCCAGGACAG +
Preference number: 4 (lower is better)
Translates to: SLLSVAMGVRPH*TACSLCLAPGQ
Trigger: CTGTCCTGGCGCCAGACACAGGGAGCAGGCAGTCAAGTGAGGTCTGACCCCCATGGCCACGCTCAGGAGAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp CGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTCTTGGTCAGGGTGGTGGTAGGAGCTTCCCGGCTTaGTGGCCGCCCAGACCACTT +
Preference number: 4 (lower is better)
Translates to: RLSGHGAASTSGLGQGGGRSFPA*WPPRPL
Trigger: AAGTGGTCTGGGCGGCCATCAAGCCGGGAAGCTCCT...ACCACCACCCTGACCAAGACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR TCA 90 bp AGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGTCGAGTGACGTTCCGCTaGTTGTCTGCATCCTCTGGC +
Preference number: 4 (lower is better)
Translates to: RSRRTFRWALLLCAARPRRVTFR*LSASSG
Trigger: GCCAGAGGATGCAGACAATCAGCGGAACGTCACTCG...ACGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGCCACCCGAGCTGAGTCCCAGGGTGCACCCCAAAGGCGATaGTCTTCAGCACGCATTCCA +
Preference number: 4 (lower is better)
Translates to: VRVVVAVPCSATRAESQGAPQRR*SSARIP
Trigger: TGGAATGCGTGCTGAAGATCATCGCCTTTGGGGTGC...ACCCTGGGACTCAGCTCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR TCA 90 bp CACAGGAGCCTCACCAAGGTGGGCAAGGCCTCCCCCGAGGGCCGGCTGCCCCGTCATTCCAGGCATCTCTaGAATAGTTCAGCACCCCAA +
Preference number: 4 (lower is better)
Translates to: HRSLTKVGKASPEGRLPRHSRHL*NSSAPQ
Trigger: TTGGGGTGCTGAACTATTTCAGAGATGCCTGGAATG...ACGGGGCAGCCGGCCCTCGGGGGAGGCCTTGCCCACCTTGGTGAGGCTCCTGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp TCGGCCACCCGAGCTGAGTCCCAGGGTGCAGTGGTAACCGTTGGGCACGCGGCGAGAACAGCATGGCAATaGGCAGACACACGTAGGGCA +
Preference number: 4 (lower is better)
Translates to: SATRAESQGAVVTVGHAARTAWQ*ADTRRA
Trigger: TGCCCTACGTGTGTCTGCTCATTGCCATGCTGTTCT...CGCCGCGTGCCCAACGGTTACCACTGCACCCTGGGACTCAGCTCGGGTGGCCGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR TCA 90 bp GCTTGCCTGAGTGAGCATTCGCTGACACTGGCGGGCTGCACAAGCCACGACTGTCCCCCGTGGCGCTCCTaGACAGCAGCATCAGGGCTT +
Preference number: 4 (lower is better)
Translates to: ACLSEHSLTLAGCTSHDCPPWRS*TAASGL
Trigger: AAGCCCTGATGCTGCTGTTCAGGAGCGCCACGGGGG...ACAGTCGTGGCTTGTGCAGCCCGCCAGTGTCAGCGAATGCTCACTCAGGCAAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp CCCCTCCGTCCCGAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCACATGTCATTGTAACTaGTGCGCCCACACGCAGCCG +
Preference number: 4 (lower is better)
Translates to: PLRPEVSAHFQVGPASLCTCHCN*CAHTQP
Trigger: CGGCTGCGTGTGGGCGCATCAGTTACAATGACATGT...GCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTCGGGACGGAGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGCCAGTGCCGTCCGGATaGGGGCCATCAGCGTGGACG +
Preference number: 4 (lower is better)
Translates to: AGCPVWMIKLIHWNTRLLPVPSG*GPSAWT
Trigger: CGTCCACGCTGATGGCCCTCATCCGGACGGCACTGG...CAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp CCCGAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCACAGCCAGTGCTCCTaGCCGCCCCACAGGGATCTC +
Preference number: 4 (lower is better)
Translates to: PEGRLPRVDDKTHPLEHTHSQCS*PPHRDL
Trigger: GAGATCCCTGTGGGGCGGTCAGGAGCACTGGCTGTG...CGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp CGGTTTAGGGTCTGGTGTGTGGTACGAGACCCAGGAAGGCAGGACAGGAAGGGGCACAGCCAGTGCTCCTaGCCGCCCCACAGGGATCTC +
Preference number: 4 (lower is better)
Translates to: RFRVWCVVRDPGRQDRKGHSQCS*PPHRDL
Trigger: GAGATCCCTGTGGGGCGGTCAGGAGCACTGGCTGTG...CCCCTTCCTGTCCTGCCTTCCTGGGTCTCGTACCACACACCAGACCCTAAACCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGTGGGGCTGGCATCTGTaGCGGGCTGAGTCTCGGCCG +
Preference number: 4 (lower is better)
Translates to: AGCPVWMIKLIHWNTRLLWGWHL*RAESRP
Trigger: CGGCCGAGACTCAGCCCGTCACAGATGCCAGCCCCA...CAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp CCCGAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGACGTTGGGTGGCTGCTaGGGGAGGGCTTGGGCTTCG +
Preference number: 4 (lower is better)
Translates to: PEGRLPRVDDKTHPLEHTTLGGC*GRAWAS
Trigger: CGAAGCCCAAGCCCTCCCTCAGCAGCCACCCAACGT...CGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp CCTGCTGCATGCAGGCGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTCTTCTGCATGCAGGCGTCTaGGCGGTCACGGTGCAGCTA +
Preference number: 4 (lower is better)
Translates to: PAACRRLSGHGAASTSGLLHAGV*AVTVQL
Trigger: TAGCTGCACCGTGACCGCTCAGACGCCTGCATGCAG...AAGACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACGCCTGCATGCAGCAGG
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR TCA 90 bp CCCCTCCGTCCCGAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCGCTAGCACCAGATGTTaGCAGCAAGGGGCTCCCATT +
Preference number: 4 (lower is better)
Translates to: PLRPEVSAHFQVGPASLCASTRC*QQGAPI
Trigger: AATGGGAGCCCCTTGCTGTCAACATCTGGTGCTAGC...GCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTCGGGACGGAGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCCCTTCCACTCGTGGGAGGAGGTGGCCGTCTTGTAGGTaGTGCTGGGGCGGGGAGTCA +
Preference number: 4 (lower is better)
Translates to: VVSCPVASLETPSTRGRRWPSCR*CWGGES
Trigger: TGACTCCCCGCCCCAGCATCACCTACAAGACGGCCA...CCTCCTCCCACGAGTGGAAGGGGTTTCCAAGGAAGCCACAGGGCAGCTGACCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GCTTGCCTGAGTGAGCATTCGCTGACACTGGCGGGCTGCACAAGCCACGACTGTCGGTTCCTGTGGGGCTaGCGGTGTCCAGGGAGGACA +
Preference number: 4 (lower is better)
Translates to: ACLSEHSLTLAGCTSHDCRFLWG*RCPGRT
Trigger: TGTCCTCCCTGGACACCGTCAGCCCCACAGGAACCG...ACAGTCGTGGCTTGTGCAGCCCGCCAGTGTCAGCGAATGCTCACTCAGGCAAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp CCCGAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCACAGCATCCTGCGGTaGTGGATCCCGAGGCCTCGC +
Preference number: 4 (lower is better)
Translates to: PEGRLPRVDDKTHPLEHTHSILR*WIPRPR
Trigger: GCGAGGCCTCGGGATCCATCACCGCAGGATGCTGTG...CGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp CCCCTCCGTCCCGAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCGCAACAGGAGCACAGTaGTCACATGCACAGTCCGAG +
Preference number: 4 (lower is better)
Translates to: PLRPEVSAHFQVGPASLCATGAQ*SHAQSE
Trigger: CTCGGACTGTGCATGTGATCACTGTGCTCCTGTTGC...GCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTCGGGACGGAGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGGCCAGTTCCAGGTGTTaGCGGCCGCATCGTTTGTAT +
Preference number: 4 (lower is better)
Translates to: EVSAHFQVGPASLCRTATASSRC*RPHRLY
Trigger: ATACAAACGATGCGGCCGGCAACACCTGGAACTGGC...CGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCCCTTCCACTCGTGGGAGGAGGCGCTCGATCTGCTGCTaGCGGCGCAGCTTCAGGAAG +
Preference number: 4 (lower is better)
Translates to: VVSCPVASLETPSTRGRRRSICC*RRSFRK
Trigger: CTTCCTGAAGCTGCGCCGGCAGCAGCAGATCGAGCG...CCTCCTCCCACGAGTGGAAGGGGTTTCCAAGGAAGCCACAGGGCAGCTGACCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GTCTTGGTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGCCACCCGAGCTGAGTCCAGGGGACTTCTCCTCTaGATTCCTGTCCTCCTCGGC +
Preference number: 4 (lower is better)
Translates to: VLVRVVVAVPCSATRAESRGLLL*IPVLLG
Trigger: GCCGAGGAGGACAGGAATGCAGAGGAGAAGTCCCCT...GGACTCAGCTCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGACCAAGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR GCA 90 bp GCTGAGTCCCAGGGTGCAGTGGTAACCGTTGGGCACGCGGCGGAGAGGGTGAGAAGGGGACTTCTCCTCTaGATTCCTGTCCTCCTCGGC +
Preference number: 4 (lower is better)
Translates to: AESQGAVVTVGHAAERVRRGLLL*IPVLLG
Trigger: GCCGAGGAGGACAGGAATGCAGAGGAGAAGTCCCCT...TCTCACCCTCTCCGCCGCGTGCCCAACGGTTACCACTGCACCCTGGGACTCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR GCA 90 bp TGGCGCCAGGACAGTGCTGGGCATCAGGTGCCCGGCCTCAGTGGCAGGAGCCGTGGATCAGGTCATTTCTaGTCTTCTTGGTGGCCGCTC +
Preference number: 4 (lower is better)
Translates to: WRQDSAGHQVPGLSGRSRGSGHF*SSWWPL
Trigger: GAGCGGCCACCAAGAAGAGCAGAAATGACCTGATCC...ACGGCTCCTGCCACTGAGGCCGGGCACCTGATGCCCAGCACTGTCCTGGCGCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGCTGGCCCGCAGGTTCTaGAGCCGTAGCTGGCTGGCC +
Preference number: 4 (lower is better)
Translates to: AGCPVWMIKLIHWNTRLLLARRF*SRSWLA
Trigger: GGCCAGCCAGCTACGGCTGCAGAACCTGCGGGCCAG...CAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GAAAATGCCTCACACAAGCACGTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCCCTCAGGTCGGGCTTTaGCTCCCACGGGCCCCCGCG +
Preference number: 4 (lower is better)
Translates to: ENASHKHVVSCPVASLETPQVGL*LPRAPA
Trigger: CGCGGGGGCCCGTGGGAGGCAAAGCCCGACCTGAGG...GGTTTCCAAGGAAGCCACAGGGCAGCTGACCACGTGCTTGTGTGAGGCATTTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GCTTGCCTGAGTGAGCATTCGCTGACACTGGCGGGCTGCACAAGCCACGACTGTTTGTCCTTGTCGCGGTaGCGGTGGTGCCTGCGCGGA +
Preference number: 4 (lower is better)
Translates to: ACLSEHSLTLAGCTSHDCLSLSR*RWCLRG
Trigger: TCCGCGCAGGCACCACCGGCACCGCGACAAGGACAA...ACAGTCGTGGCTTGTGCAGCCCGCCAGTGTCAGCGAATGCTCACTCAGGCAAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp CCCGAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGTTGTCCTTGTCGCGGTaGCGGTGGTGCCTGCGCGGA +
Preference number: 4 (lower is better)
Translates to: PEGRLPRVDDKTHPLEHTLSLSR*RWCLRG
Trigger: TCCGCGCAGGCACCACCGGCACCGCGACAAGGACAA...CGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp CTCGTGGGAGGAGGACAGCAAATGGCTGCCTTGTTTGCCACCATGACATCCAGTCGCCTTCGGGGCCTCTaGTCGGTCCTGGTCCCCCGC +
Preference number: 4 (lower is better)
Translates to: LVGGGQQMAALFATMTSSRLRGL*SVLVPR
Trigger: GCGGGGGACCAGGACCGAGCAGAGGCCCCGAAGGCG...ACTGGATGTCATGGTGGCAAACAAGGCAGCCATTTGCTGTCCTCCTCCCACGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGTTGCTCGGATCCTGGTaGCGGTGCGCGCGGTGGCGT +
Preference number: 4 (lower is better)
Translates to: AGCPVWMIKLIHWNTRLLLLGSW*RCARWR
Trigger: ACGCCACCGCGCGCACCGGCACCAGGATCCGAGCAA...CAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp TTGGTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGCCACCCGAGCTGAGTCCCAGAGATGGACAGCTCCATaGGGTACCCAGGGCTTGGAC +
Preference number: 4 (lower is better)
Translates to: LVRVVVAVPCSATRAESQRWTAP*GTQGLD
Trigger: GTCCAAGCCCTGGGTACCGCATGGAGCTGTCCATCT...CTGGGACTCAGCTCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGACCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR GCA 90 bp GCACCAGTGGTCTTGGTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGCCACCCGATCGGTGGCATTGGCCTaGTCATCACAGGCCTGGTTG +
Preference number: 4 (lower is better)
Translates to: APVVLVRVVVAVPCSATRSVALA*SSQAWL
Trigger: CAACCAGGCCTGTGATGAGCAGGCCAATGCCACCGA...TCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGACCAAGACCACTGGTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR GCA 90 bp GCCCGGCCTCAGTGGCAGGAGCCGTGTCCTCCCTCGGTCACTTGCTCTGAGTTTAGGCCTCCAGGAGCCTaGTGCATCTGGTCTCTGGTG +
Preference number: 4 (lower is better)
Translates to: ARPQWQEPCPPSVTCSEFRPPGA*CIWSLV
Trigger: CACCAGAGACCAGATGCAGCAGGCTCCTGGAGGCCT...AAACTCAGAGCAAGTGACCGAGGGAGGACACGGCTCCTGCCACTGAGGCCGGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp CCACGTGAAGGGTGCTCCCCACAGGACGCAGAGCTCCTCACAACGGCTCCAAGCACAGCCGGCTGTGTCTaGTCCAGGGTGGCCTTCAGA +
Preference number: 4 (lower is better)
Translates to: PREGCSPQDAELLTTAPSTAGCV*SRVAFR
Trigger: TCTGAAGGCCACCCTGGAGCAGACACAGCCGGCTGT...GCTTGGAGCCGTTGTGAGGAGCTCTGCGTCCTGTGGGGAGCACCCTTCACGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCCCTTCCACTCGTGGGAGGAGGGGTCCGGGGTGGTGCTaGAAAGATGAGTCCCACGGG +
Preference number: 4 (lower is better)
Translates to: VVSCPVASLETPSTRGRRGPGWC*KDESHG
Trigger: CCCGTGGGACTCATCTTTGCAGCACCACCCCGGACC...CCTCCTCCCACGAGTGGAAGGGGTTTCCAAGGAAGCCACAGGGCAGCTGACCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp CGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTCTTGGTCAGGGTGGTGGTGGCGGTCCGGGGTGGTaGTGCAAAGATGAGTCCCAC +
Preference number: 4 (lower is better)
Translates to: RLSGHGAASTSGLGQGGGGGPGW*CKDESH
Trigger: GTGGGACTCATCTTTGCAGCACCACCCCGGACCGCC...ACCACCACCCTGACCAAGACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR GCA 90 bp GTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCCCTTCCACTCGTGGGAGGAGGGGCGGTCCGGGGTGGTaGTGCAAAGATGAGTCCCAC +
Preference number: 4 (lower is better)
Translates to: VVSCPVASLETPSTRGRRGGPGW*CKDESH
Trigger: GTGGGACTCATCTTTGCAGCACCACCCCGGACCGCC...CCTCCTCCCACGAGTGGAAGGGGTTTCCAAGGAAGCCACAGGGCAGCTGACCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp TCCAGGGAGGACAGAGCTTGCCTGAGTGAGCATTCGCTGACACTGGCGGGCTGCGGCGGTCCGGGGTGGTaGTGCAAAGATGAGTCCCAC +
Preference number: 4 (lower is better)
Translates to: SREDRACLSEHSLTLAGCGGPGW*CKDESH
Trigger: GTGGGACTCATCTTTGCAGCACCACCCCGGACCGCC...GCAGCCCGCCAGTGTCAGCGAATGCTCACTCAGGCAAGCTCTGTCCTCCCTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp CGGTTTAGGGTCTGGTGTGTGGTACGAGACCCAGGAAGGCAGGACAGGAAGGGGTCTGCTTCCTGTCCCTaGGGCGGTGGCAGCGGTGGT +
Preference number: 4 (lower is better)
Translates to: RFRVWCVVRDPGRQDRKGSASCP*GGGSGG
Trigger: ACCACCGCTGCCACCGCCGCAGGGACAGGAAGCAGA...CCCCTTCCTGTCCTGCCTTCCTGGGTCTCGTACCACACACCAGACCCTAAACCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp CCCCTCCGTCCCGAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCACAGCACTGCTTGGTaGGCCATCCATATCGGCAGA +
Preference number: 4 (lower is better)
Translates to: PLRPEVSAHFQVGPASLCHSTAW*AIHIGR
Trigger: TCTGCCGATATGGATGGCGCACCAAGCAGTGCTGTG...GCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTCGGGACGGAGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp CCCGAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGGTGGTAGCTGTGCCGTaGTCGGCCACCCGAGCTGAG +
Preference number: 4 (lower is better)
Translates to: PEGRLPRVDDKTHPLEHTVVAVP*SATRAE
Trigger: CTCAGCTCGGGTGGCCGAGCACGGCACAGCTACCAC...CGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp TCCAGGGAGGACAGAGCTTGCCTGAGTGAGCATTCGCTGACACTGGCGGGCTGCCTTTCAGGTGGGCCCTaGTTCTCTGTGCCGCACGGC +
Preference number: 4 (lower is better)
Translates to: SREDRACLSEHSLTLAGCLSGGP*FSVPHG
Trigger: GCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAG...GCAGCCCGCCAGTGTCAGCGAATGCTCACTCAGGCAAGCTCTGTCCTCCCTGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp TCCAGGGAGGACAGAGCTTGCCTGAGTGAGCATTCGCTGACACTGGCGGGCTGCCCACTGGCAAGGGCTTaGTACCTGGCTGCCATCGCG +
Preference number: 4 (lower is better)
Translates to: SREDRACLSEHSLTLAGCPLARA*YLAAIA
Trigger: CGCGATGGCAGCCAGGTAGCAAGCCCTTGCCAGTGG...GCAGCCCGCCAGTGTCAGCGAATGCTCACTCAGGCAAGCTCTGTCCTCCCTGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp CCCCTCCGTCCCGAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCAAGCACGTGGTCAGCTaGCCTGTGGCTTCCTTGGAA +
Preference number: 4 (lower is better)
Translates to: PLRPEVSAHFQVGPASLCKHVVS*PVASLE
Trigger: TTCCAAGGAAGCCACAGGGCAGCTGACCACGTGCTT...GCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTCGGGACGGAGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGGGCTTCCTCCCTCCTaGCCTGACGGCCCCACATCC +
Preference number: 4 (lower is better)
Translates to: EGRLPRVDDKTHPLEHTPGLPPS*PDGPTS
Trigger: GGATGTGGGGCCGTCAGGGCAGGAGGGAGGAAGCCC...AGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTCTGGCGCCAGGACAGTaGTGGGCATCAGGTGCCCGG +
Preference number: 4 (lower is better)
Translates to: EGRLPRVDDKTHPLEHTPLAPGQ*WASGAR
Trigger: CCGGGCACCTGATGCCCAGCACTGTCCTGGCGCCAG...AGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp AGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGTCAGACCTCACTTGACTaGCTGCTCCCTGTGTCTGGC +
Preference number: 4 (lower is better)
Translates to: RSRRTFRWALLLCAARPRQTSLD*LLPVSG
Trigger: GCCAGACACAGGGAGCAGGCAGTCAAGTGAGGTCTG...ACGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp CCCCTCCGTCCCGAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCCTCCCAGCATCTTGTaGACCTTGGACAGTGTCCTG +
Preference number: 4 (lower is better)
Translates to: PLRPEVSAHFQVGPASLCPPSIL*TLDSVL
Trigger: CAGGACACTGTCCAAGGTGCACAAGATGCTGGGAGG...GCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTCGGGACGGAGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CCCCTCCGTCCCGAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCCGCATCTGTGCTGTTaGGGAAACAGGCCTTGTGGA +
Preference number: 4 (lower is better)
Translates to: PLRPEVSAHFQVGPASLCPHLCC*GNRPCG
Trigger: TCCACAAGGCCTGTTTCCCCAACAGCACAGATGCGG...GCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTCGGGACGGAGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CACAGGAGCCTCACCAAGGTGGGCAAGGCCTCCCCCGAGGGCCGGCTGCCCCGTTGTCGAAGTTGGTTGTaGGAGTCTCATCCTGGAAGT +
Preference number: 4 (lower is better)
Translates to: HRSLTKVGKASPEGRLPRCRSWL*ESHPGS
Trigger: ACTTCCAGGATGAGACTCCCACAACCAACTTCGACA...ACGGGGCAGCCGGCCCTCGGGGGAGGCCTTGCCCACCTTGGTGAGGCTCCTGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGCCACCCGAGCTGAGTCCCAGGGTTCTCCCGTCAGGATCTaGAAGACAGTGAGGATGGCG +
Preference number: 4 (lower is better)
Translates to: VRVVVAVPCSATRAESQGSPVRI*KTVRMA
Trigger: CGCCATCCTCACTGTCTTCCAGATCCTGACGGGAGA...ACCCTGGGACTCAGCTCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp CACAGGAGCCTCACCAAGGTGGGCAAGGCCTCCCCCGAGGGCCGGCTGCCCCGTCTTCAGCCACTTCTTTaGCCTTTTGCAGAGCAAGCT +
Preference number: 4 (lower is better)
Translates to: HRSLTKVGKASPEGRLPRLQPLL*PFAEQA
Trigger: AGCTTGCTCTGCAAAAGGCCAAAGAAGTGGCTGAAG...ACGGGGCAGCCGGCCCTCGGGGGAGGCCTTGCCCACCTTGGTGAGGCTCCTGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp TCCAGGGAGGACAGAGCTTGCCTGAGTGAGCATTCGCTGACACTGGCGGGCTGCGCTGCCTGGCGGCGATaGAGATGTTCGCGGCAGACA +
Preference number: 4 (lower is better)
Translates to: SREDRACLSEHSLTLAGCAAWRR*RCSRQT
Trigger: TGTCTGCCGCGAACATCTCCATCGCCGCCAGGCAGC...GCAGCCCGCCAGTGTCAGCGAATGCTCACTCAGGCAAGCTCTGTCCTCCCTGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CCACGTGAAGGGTGCTCCCCACAGGACGCAGAGCTCCTCACAACGGCTCCAAGCCCGAGTTCTGCTGCCTaGCGGCGATGGAGATGTTCG +
Preference number: 4 (lower is better)
Translates to: PREGCSPQDAELLTTAPSPSSAA*RRWRCS
Trigger: CGAACATCTCCATCGCCGCCAGGCAGCAGAACTCGG...GCTTGGAGCCGTTGTGAGGAGCTCTGCGTCCTGTGGGGAGCACCCTTCACGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CGGTTTAGGGTCTGGTGTGTGGTACGAGACCCAGGAAGGCAGGACAGGAAGGGGTTCTGCAGCCGTAGCTaGCTGGCCCGCTGCTCCCAC +
Preference number: 4 (lower is better)
Translates to: RFRVWCVVRDPGRQDRKGFCSRS*LARCSH
Trigger: GTGGGAGCAGCGGGCCAGCCAGCTACGGCTGCAGAA...CCCCTTCCTGTCCTGCCTTCCTGGGTCTCGTACCACACACCAGACCCTAAACCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTATGTCGGGCCGCAGGTaGCGCGTAGTGGCGAAGCGC +
Preference number: 4 (lower is better)
Translates to: EGRLPRVDDKTHPLEHTPMSGRR*RVVAKR
Trigger: GCGCTTCGCCACTACGCGCCACCTGCGGCCCGACAT...AGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GCTGCATGCAGGCGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTCTTGGTCTCCAGGTCACAGTGTaGCTCCCGGGGCTGGTGGTT +
Preference number: 4 (lower is better)
Translates to: AACRRLSGHGAASTSGLGLQVTV*LPGLVV
Trigger: AACCACCAGCCCCGGGAGCCACACTGTGACCTGGAG...ACCAAGACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACGCCTGCATGCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp GTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGCCACCCGAGCTGAGTCCCAGGGTCAGTCACAGTCCCACTaGTCTCCAGGTCACAGTGTG +
Preference number: 4 (lower is better)
Translates to: VRVVVAVPCSATRAESQGQSQSH*SPGHSV
Trigger: CACACTGTGACCTGGAGACCAGTGGGACTGTGACTG...ACCCTGGGACTCAGCTCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp GAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGCAGTCACAGTCCCACTaGTCTCCAGGTCACAGTGTG +
Preference number: 4 (lower is better)
Translates to: EVSAHFQVGPASLCRTATQSQSH*SPGHSV
Trigger: CACACTGTGACCTGGAGACCAGTGGGACTGTGACTG...CGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp ACCCGAGCTGAGTCCCAGGGTGCAGTGGTAACCGTTGGGCACGCGGCGGAGAGGGGCGGAGCAGGTTGGTaGGGCTTAAACAGAACATGG +
Preference number: 4 (lower is better)
Translates to: TRAESQGAVVTVGHAAERGGAGW*GLNRTW
Trigger: CCATGTTCTGTTTAAGCCCCACCAACCTGCTCCGCC...CCTCTCCGCCGCGTGCCCAACGGTTACCACTGCACCCTGGGACTCAGCTCGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp GAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGGGCGGAGCAGGTTGGTaGGGCTTAAACAGAACATGG +
Preference number: 4 (lower is better)
Translates to: EVSAHFQVGPASLCRTATGGAGW*GLNRTW
Trigger: CCATGTTCTGTTTAAGCCCCACCAACCTGCTCCGCC...CGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GCTTGCCTGAGTGAGCATTCGCTGACACTGGCGGGCTGCACAAGCCACGACTGTCGAGTCTGTGCGCACTaGGTCCTCAGCAGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: ACLSEHSLTLAGCTSHDCRVCAH*VLSSQG
Trigger: GCCCTGGCTGCTGAGGACCCAGTGCGCACAGACTCG...ACAGTCGTGGCTTGTGCAGCCCGCCAGTGTCAGCGAATGCTCACTCAGGCAAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GCTGTGCCGTGCTCGGCCACCCGAGCTGAGTCCCAGGGTGCAGTGGTAACCGTTTCAGAGCGTTGTTCCTaGGCGAGTCTGTGCGCACTG +
Preference number: 4 (lower is better)
Translates to: AVPCSATRAESQGAVVTVSERCS*ASLCAL
Trigger: CAGTGCGCACAGACTCGCCCAGGAACAACGCTCTGA...AACGGTTACCACTGCACCCTGGGACTCAGCTCGGGTGGCCGAGCACGGCACAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp GTCTTGGTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGCCACCCGAGCTGAGTCCAGTGTTTCAGCACCATaGGCCAGCCTTCTCCCGTGG +
Preference number: 4 (lower is better)
Translates to: VLVRVVVAVPCSATRAESSVSAP*ASLLPW
Trigger: CCACGGGAGAAGGCTGGCCCATGGTGCTGAAACACT...GGACTCAGCTCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGACCAAGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp GAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGAACGACTGCCGGTTTTaGGGCATGTACCGTGTCAGG +
Preference number: 4 (lower is better)
Translates to: EVSAHFQVGPASLCRTATNDCRF*GMYRVR
Trigger: CCTGACACGGTACATGCCCCAAAACCGGCAGTCGTT...CGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp TGGCGCCAGGACAGTGCTGGGCATCAGGTGCCCGGCCTCAGTGGCAGGAGCCGTGTCCGGAAGTTGTTGTaGCGGTTGATGCTGGTGTCA +
Preference number: 4 (lower is better)
Translates to: WRQDSAGHQVPGLSGRSRVRKLL*RLMLVS
Trigger: TGACACCAGCATCAACCGCCACAACAACTTCCGGAC...ACGGCTCCTGCCACTGAGGCCGGGCACCTGATGCCCAGCACTGTCCTGGCGCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GTCTTGGTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGCCACCCGAGCTGAGTCCTGCTCATCACAGGCCTaGTTGCTCAGGCAGGACAGC +
Preference number: 4 (lower is better)
Translates to: VLVRVVVAVPCSATRAESCSSQA*LLRQDS
Trigger: GCTGTCCTGCCTGAGCAACCAGGCCTGTGATGAGCA...GGACTCAGCTCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGACCAAGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp GCACCAGTGGTCTTGGTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGCCACCCGACACACTCGGTGGCATTaGCCTGCTCATCACAGGCCT +
Preference number: 4 (lower is better)
Translates to: APVVLVRVVVAVPCSATRHTRWH*PAHHRP
Trigger: AGGCCTGTGATGAGCAGGCCAATGCCACCGAGTGTG...TCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGACCAAGACCACTGGTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp TTGGTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGCCACCCGAGCTGAGTCCCAGCACACTCGGTGGCATTaGCCTGCTCATCACAGGCCT +
Preference number: 4 (lower is better)
Translates to: LVRVVVAVPCSATRAESQHTRWH*PAHHRP
Trigger: AGGCCTGTGATGAGCAGGCCAATGCCACCGAGTGTG...CTGGGACTCAGCTCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGACCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp AGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGTCACACTCGGTGGCATTaGCCTGCTCATCACAGGCCT +
Preference number: 4 (lower is better)
Translates to: RSRRTFRWALLLCAARPRHTRWH*PAHHRP
Trigger: AGGCCTGTGATGAGCAGGCCAATGCCACCGAGTGTG...ACGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp TTGGTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGCCACCCGAGCTGAGTCCCAGCTGCTTTGTCCCAGCTaGGGCCAGCTTGATCTCCAG +
Preference number: 4 (lower is better)
Translates to: LVRVVVAVPCSATRAESQLLCPS*GQLDLQ
Trigger: CTGGAGATCAAGCTGGCCCCAGCTGGGACAAAGCAG...CTGGGACTCAGCTCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGACCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp GCTTGCCTGAGTGAGCATTCGCTGACACTGGCGGGCTGCACAAGCCACGACTGTGCTCCAGGGGTGGCCTaGCCTCATGGGGTGCATCCT +
Preference number: 4 (lower is better)
Translates to: ACLSEHSLTLAGCTSHDCAPGVA*PHGVHP
Trigger: AGGATGCACCCCATGAGGCCAGGCCACCCCTGGAGC...ACAGTCGTGGCTTGTGCAGCCCGCCAGTGTCAGCGAATGCTCACTCAGGCAAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CCCGAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCAGCGGTGGTGGTGGTaGTGCGACGACGCCTGGCTA +
Preference number: 4 (lower is better)
Translates to: PEGRLPRVDDKTHPLEHTQRWWW*CDDAWL
Trigger: TAGCCAGGCGTCGTCGCACCACCACCACCACCGCTG...CGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGTGGCAGCGGTGGTGGTaGTGGTGCGACGACGCCTGG +
Preference number: 4 (lower is better)
Translates to: AGCPVWMIKLIHWNTRLLWQRWW*WCDDAW
Trigger: CCAGGCGTCGTCGCACCACCACCACCACCGCTGCCA...CAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTTGGCAGCGGTGGTGGTaGTGGTGCGACGACGCCTGG +
Preference number: 4 (lower is better)
Translates to: EGRLPRVDDKTHPLEHTPWQRWW*WCDDAW
Trigger: CCAGGCGTCGTCGCACCACCACCACCACCGCTGCCA...AGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTCTTGGTCAGGGTGGTGGTCTCCTGGCCAGCTGTTaGCGACGTTGGGTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: RLSGHGAASTSGLGQGGGLLASC*RRWVAA
Trigger: AGCAGCCACCCAACGTCGCCAACAGCTGGCCAGGAG...ACCACCACCCTGACCAAGACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp CCTGCTGCATGCAGGCGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTCTTAGCGGCCCGAGTTGGTaGCCACAGCCTCCTCGAAAG +
Preference number: 4 (lower is better)
Translates to: PAACRRLSGHGAASTSGLSGPSW*PQPPRK
Trigger: CTTTCGAGGAGGCTGTGGCCACCAACTCGGGCCGCT...AAGACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACGCCTGCATGCAGCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp CCCGAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGAGGAGCGGCCCGAGTTaGTGGCCACAGCCTCCTCGA +
Preference number: 4 (lower is better)
Translates to: PEGRLPRVDDKTHPLEHTRSGPS*WPQPPR
Trigger: TCGAGGAGGCTGTGGCCACCAACTCGGGCCGCTCCT...CGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGGAGCCTCACCAAGGTaGGCAAGGCCTCCCCCGAGG +
Preference number: 4 (lower is better)
Translates to: EGRLPRVDDKTHPLEHTPGASPR*ARPPPR
Trigger: CCTCGGGGGAGGCCTTGCCCACCTTGGTGAGGCTCC...AGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGGGAGCCTCACCAAGGTaGGCAAGGCCTCCCCCGAGG +
Preference number: 4 (lower is better)
Translates to: AGCPVWMIKLIHWNTRLLGASPR*ARPPPR
Trigger: CCTCGGGGGAGGCCTTGCCCACCTTGGTGAGGCTCC...CAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGGAACCACTGCCCTGTaGGTGGGGTCCCGGCTCCTG +
Preference number: 4 (lower is better)
Translates to: EGRLPRVDDKTHPLEHTPGTTAL*VGSRLL
Trigger: CAGGAGCCGGGACCCCACCCACAGGGCAGTGGTTCC...AGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCCCTTCCACTCGTGGGAGGAGGCCCCGGCGAAGTGGATaGGTGAGGAGTTGGCCGTCT +
Preference number: 4 (lower is better)
Translates to: VVSCPVASLETPSTRGRRPRRSG*VRSWPS
Trigger: AGACGGCCAACTCCTCACCCATCCACTTCGCCGGGG...CCTCCTCCCACGAGTGGAAGGGGTTTCCAAGGAAGCCACAGGGCAGCTGACCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CCCCTCCGTCCCGAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCTTAGGGTCTGGTGTGTaGTACGAGACCCAGGAAGGC +
Preference number: 4 (lower is better)
Translates to: PLRPEVSAHFQVGPASLCLGSGV*YETQEG
Trigger: GCCTTCCTGGGTCTCGTACCACACACCAGACCCTAA...GCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTCGGGACGGAGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp TCCAGGGAGGACAGAGCTTGCCTGAGTGAGCATTCGCTGACACTGGCGGGCTGCCGGCGCACTTTCAGGTaGGCCCTGCTTCTCTGTGCC +
Preference number: 4 (lower is better)
Translates to: SREDRACLSEHSLTLAGCRRTFR*ALLLCA
Trigger: GGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCG...GCAGCCCGCCAGTGTCAGCGAATGCTCACTCAGGCAAGCTCTGTCCTCCCTGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCCCTTCCACTCGTGGGAGGAGGCCGTCTACGTCCACCTaGACCGGACAGGGCTGCACA +
Preference number: 4 (lower is better)
Translates to: VVSCPVASLETPSTRGRRPSTST*TGQGCT
Trigger: TGTGCAGCCCTGTCCGGTCCAGGTGGACGTAGACGG...CCTCCTCCCACGAGTGGAAGGGGTTTCCAAGGAAGCCACAGGGCAGCTGACCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp AGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGTTGGCGGTCAGGCACTTaGTCAAGAGCAGCAGAGCCA +
Preference number: 4 (lower is better)
Translates to: RSRRTFRWALLLCAARPRWRSGT*SRAAEP
Trigger: TGGCTCTGCTGCTCTTGACCAAGTGCCTGACCGCCA...ACGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp TCCAGGGAGGACAGAGCTTGCCTGAGTGAGCATTCGCTGACACTGGCGGGCTGCCTGGGTGTGAGGGCCTaGCGGTCAGGCACTTGGTCA +
Preference number: 4 (lower is better)
Translates to: SREDRACLSEHSLTLAGCLGVRA*RSGTWS
Trigger: TGACCAAGTGCCTGACCGCCAGGCCCTCACACCCAG...GCAGCCCGCCAGTGTCAGCGAATGCTCACTCAGGCAAGCTCTGTCCTCCCTGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp AGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGTTCCAGTGCTCTCCACTaGCAAGGGCTTGCTACCTGG +
Preference number: 4 (lower is better)
Translates to: RSRRTFRWALLLCAARPRSSALH*QGLATW
Trigger: CCAGGTAGCAAGCCCTTGCCAGTGGAGAGCACTGGA...ACGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp AGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGTCCTCACACAAGCACGTaGTCAGCTGCCCTGTGGCTT +
Preference number: 4 (lower is better)
Translates to: RSRRTFRWALLLCAARPRPHTST*SAALWL
Trigger: AAGCCACAGGGCAGCTGACCACGTGCTTGTGTGAGG...ACGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CGGTTTAGGGTCTGGTGTGTGGTACGAGACCCAGGAAGGCAGGACAGGAAGGGGCCTGCTCCCTGTGTCTaGCGCCAGGACAGTGCTGGG +
Preference number: 4 (lower is better)
Translates to: RFRVWCVVRDPGRQDRKGPAPCV*RQDSAG
Trigger: CCCAGCACTGTCCTGGCGCCAGACACAGGGAGCAGG...CCCCTTCCTGTCCTGCCTTCCTGGGTCTCGTACCACACACCAGACCCTAAACCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp ACGCCTGCTGCATGCAGGCGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTACTCCAGGTACCCGTTaGGCTCTCGCTCGATCTGCT +
Preference number: 4 (lower is better)
Translates to: TPAACRRLSGHGAASTSGTPGTR*ALARSA
Trigger: AGCAGATCGAGCGAGAGCTCAACGGGTACCTGGAGT...ACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACGCCTGCATGCAGCAGGCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR TCA 90 bp GCCCGGCCTCAGTGGCAGGAGCCGTGTCCTCCCTCGGTCACTTGCTCTGAGTTTACTCCAGGTACCCGTTaGGCTCTCGCTCGATCTGCT +
Preference number: 4 (lower is better)
Translates to: ARPQWQEPCPPSVTCSEFTPGTR*ALARSA
Trigger: AGCAGATCGAGCGAGAGCTCAACGGGTACCTGGAGT...AAACTCAGAGCAAGTGACCGAGGGAGGACACGGCTCCTGCCACTGAGGCCGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp CGGTTTAGGGTCTGGTGTGTGGTACGAGACCCAGGAAGGCAGGACAGGAAGGGGAGGAGCTTCCCGGCTTaGTGGCCGCCCAGACCACTT +
Preference number: 4 (lower is better)
Translates to: RFRVWCVVRDPGRQDRKGRSFPA*WPPRPL
Trigger: AAGTGGTCTGGGCGGCCATCAAGCCGGGAAGCTCCT...CCCCTTCCTGTCCTGCCTTCCTGGGTCTCGTACCACACACCAGACCCTAAACCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GCTGAGTCCCAGGGTGCAGTGGTAACCGTTGGGCACGCGGCGGAGAGGGTGAGAAGAACATGCCTTTGCTaGCGCCGCCTTGCGATTCGA +
Preference number: 4 (lower is better)
Translates to: AESQGAVVTVGHAAERVRRTCLC*RRLAIR
Trigger: TCGAATCGCAAGGCGGCGTCAGCAAAGGCATGTTCT...TCTCACCCTCTCCGCCGCGTGCCCAACGGTTACCACTGCACCCTGGGACTCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR TCA 90 bp AGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGTAGAACATGCCTTTGCTaGCGCCGCCTTGCGATTCGA +
Preference number: 4 (lower is better)
Translates to: RSRRTFRWALLLCAARPRRTCLC*RRLAIR
Trigger: TCGAATCGCAAGGCGGCGTCAGCAAAGGCATGTTCT...ACGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GCTTGCCTGAGTGAGCATTCGCTGACACTGGCGGGCTGCACAAGCCACGACTGTTTCTCCACAGCCTCGTaGGCAGGCTGCGCCTTGTGC +
Preference number: 4 (lower is better)
Translates to: ACLSEHSLTLAGCTSHDCFSTAS*AGCALC
Trigger: GCACAAGGCGCAGCCTGCTCACGAGGCTGTGGAGAA...ACAGTCGTGGCTTGTGCAGCCCGCCAGTGTCAGCGAATGCTCACTCAGGCAAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp ACGCCTGCTGCATGCAGGCGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTGACTGCCCATGCGAGTaGCGTTCCGCTGATTGTCTG +
Preference number: 4 (lower is better)
Translates to: TPAACRRLSGHGAASTSGDCPCE*RSADCL
Trigger: CAGACAATCAGCGGAACGTCACTCGCATGGGCAGTC...ACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACGCCTGCATGCAGCAGGCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR TCA 90 bp AGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGTGCACCCCAAAGGCGATaGTCTTCAGCACGCATTCCA +
Preference number: 4 (lower is better)
Translates to: RSRRTFRWALLLCAARPRAPQRR*SSARIP
Trigger: TGGAATGCGTGCTGAAGATCATCGCCTTTGGGGTGC...ACGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTCCTGGCGGAGCAGCTTaGTCAGCCGCGCAGCTCGAA +
Preference number: 4 (lower is better)
Translates to: EGRLPRVDDKTHPLEHTPPGGAA*SAAQLE
Trigger: TTCGAGCTGCGCGGCTGATCAAGCTGCTCCGCCAGG...AGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp CCCCTCCGTCCCGAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCCATCAGCGTGGACGTaGAGTGAACAGTCATGTCCT +
Preference number: 4 (lower is better)
Translates to: PLRPEVSAHFQVGPASLCPSAWT*SEQSCP
Trigger: AGGACATGACTGTTCACTTCACGTCCACGCTGATGG...GCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTCGGGACGGAGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GCTGAGTCCCAGGGTGCAGTGGTAACCGTTGGGCACGCGGCGGAGAGGGTGAGAAACTCCGCGTCACACTaGTGCTGCTTTGTCCCAGCT +
Preference number: 4 (lower is better)
Translates to: AESQGAVVTVGHAAERVRNSASH*CCFVPA
Trigger: AGCTGGGACAAAGCAGCATCAGTGTGACGCGGAGTT...TCTCACCCTCTCCGCCGCGTGCCCAACGGTTACCACTGCACCCTGGGACTCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR TCA 90 bp CACAGGAGCCTCACCAAGGTGGGCAAGGCCTCCCCCGAGGGCCGGCTGCCCCGTAGGAGACAGACTCTTTaGTGCCACTCTCTTGGTTTT +
Preference number: 4 (lower is better)
Translates to: HRSLTKVGKASPEGRLPRRRQTL*CHSLGF
Trigger: AAAACCAAGAGAGTGGCATCAAAGAGTCTGTCTCCT...ACGGGGCAGCCGGCCCTCGGGGGAGGCCTTGCCCACCTTGGTGAGGCTCCTGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp ACCCGAGCTGAGTCCCAGGGTGCAGTGGTAACCGTTGGGCACGCGGCGGAGAGGGTTATGCTCTGCATCTaGACGTCCACAGCCAGTGCT +
Preference number: 4 (lower is better)
Translates to: TRAESQGAVVTVGHAAERVMLCI*TSTASA
Trigger: AGCACTGGCTGTGGACGTTCAGATGCAGAGCATAAC...CCTCTCCGCCGCGTGCCCAACGGTTACCACTGCACCCTGGGACTCAGCTCGGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR TCA 90 bp GAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTCACAGCATCCTGCGGTaGTGGATCCCGAGGCCTCGC +
Preference number: 4 (lower is better)
Translates to: EGRLPRVDDKTHPLEHTPHSILR*WIPRPR
Trigger: GCGAGGCCTCGGGATCCATCACCGCAGGATGCTGTG...AGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp CCCGAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCGCTCGATCTGCTGCTaGCGGCGCAGCTTCAGGAAG +
Preference number: 4 (lower is better)
Translates to: PEGRLPRVDDKTHPLEHTRSICC*RRSFRK
Trigger: CTTCCTGAAGCTGCGCCGGCAGCAGCAGATCGAGCG...CGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GCTTGCCTGAGTGAGCATTCGCTGACACTGGCGGGCTGCACAAGCCACGACTGTTCTCGCTCGATCTGCTaGTGCCGGCGCAGCTTCAGG +
Preference number: 4 (lower is better)
Translates to: ACLSEHSLTLAGCTSHDCSRSIC*CRRSFR
Trigger: CCTGAAGCTGCGCCGGCAGCAGCAGATCGAGCGAGA...ACAGTCGTGGCTTGTGCAGCCCGCCAGTGTCAGCGAATGCTCACTCAGGCAAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGGGATCAGGTCATTTCTaGTCTTCTTGGTGGCCGCTC +
Preference number: 4 (lower is better)
Translates to: EVSAHFQVGPASLCRTATGSGHF*SSWWPL
Trigger: GAGCGGCCACCAAGAAGAGCAGAAATGACCTGATCC...CGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp CCCCTCCGTCCCGAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCGGATCAGGTCATTTCTaGTCTTCTTGGTGGCCGCTC +
Preference number: 4 (lower is better)
Translates to: PLRPEVSAHFQVGPASLCGSGHF*SSWWPL
Trigger: GAGCGGCCACCAAGAAGAGCAGAAATGACCTGATCC...GCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTCGGGACGGAGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp CGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTCTTGGTCAGGGTGGTGGTTTGGCCGAGTTCTGCTaGCTGGCGGCGATGGAGATG +
Preference number: 4 (lower is better)
Translates to: RLSGHGAASTSGLGQGGGLAEFC*LAAMEM
Trigger: CATCTCCATCGCCGCCAGGCAGCAGAACTCGGCCAA...ACCACCACCCTGACCAAGACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR GCA 90 bp GTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCCCTTCCACTCGTGGGAGGAGGTTGGCCGAGTTCTGCTaGCTGGCGGCGATGGAGATG +
Preference number: 4 (lower is better)
Translates to: VVSCPVASLETPSTRGRRLAEFC*LAAMEM
Trigger: CATCTCCATCGCCGCCAGGCAGCAGAACTCGGCCAA...CCTCCTCCCACGAGTGGAAGGGGTTTCCAAGGAAGCCACAGGGCAGCTGACCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp TCTTCACCAAACAAGGGACCTCCCAGCATCTTGTGCACCTTGGACAGTGTCCTGGGTGCCGGTGGTGCCTaGGCGGAGGGTCGACGCCCT +
Preference number: 4 (lower is better)
Translates to: SSPNKGPPSILCTLDSVLGAGGA*AEGRRP
Trigger: AGGGCGTCGACCCTCCGCGCAGGCACCACCGGCACC...CAGGACACTGTCCAAGGTGCACAAGATGCTGGGAGGTCCCTTGTTTGGTGAAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp CCCGAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGTCCTGGGCGAGTCTGTaGGCACTGGGTCCTCAGCAG +
Preference number: 4 (lower is better)
Translates to: PEGRLPRVDDKTHPLEHTSWASL*ALGPQQ
Trigger: CTGCTGAGGACCCAGTGCGCACAGACTCGCCCAGGA...CGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp ACGCCTGCTGCATGCAGGCGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTTCGGTGGCATTGGCCTaGTCATCACAGGCCTGGTTG +
Preference number: 4 (lower is better)
Translates to: TPAACRRLSGHGAASTSGSVALA*SSQAWL
Trigger: CAACCAGGCCTGTGATGAGCAGGCCAATGCCACCGA...ACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACGCCTGCATGCAGCAGGCGT
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR GCA 90 bp TCGGCCACCCGAGCTGAGTCCCAGGGTGCAGTGGTAACCGTTGGGCACGCGGCGAGATGGGCATGTTCATaGGAACCAGGCGCTTGTAAG +
Preference number: 4 (lower is better)
Translates to: SATRAESQGAVVTVGHAARWACS*EPGACK
Trigger: CTTACAAGCGCCTGGTTCGCATGAACATGCCCATCT...CGCCGCGTGCCCAACGGTTACCACTGCACCCTGGGACTCAGCTCGGGTGGCCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR GCA 90 bp TGGCGCCAGGACAGTGCTGGGCATCAGGTGCCCGGCCTCAGTGGCAGGAGCCGTAGATGGGCATGTTCATaGGAACCAGGCGCTTGTAAG +
Preference number: 4 (lower is better)
Translates to: WRQDSAGHQVPGLSGRSRRWACS*EPGACK
Trigger: CTTACAAGCGCCTGGTTCGCATGAACATGCCCATCT...ACGGCTCCTGCCACTGAGGCCGGGCACCTGATGCCCAGCACTGTCCTGGCGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GTGCAGCTAGCACCAGTGGTCTTGGTCAGGGTGGTGGTAGCTGTGCCGTGCTCGAGGCCTCCAGGAGCCTaGTGCATCTGGTCTCTGGTG +
Preference number: 4 (lower is better)
Translates to: VQLAPVVLVRVVVAVPCSRPPGA*CIWSLV
Trigger: CACCAGAGACCAGATGCAGCAGGCTCCTGGAGGCCT...CGAGCACGGCACAGCTACCACCACCCTGACCAAGACCACTGGTGCTAGCTGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR GCA 90 bp CCCGAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGGGTCCGGGGTGGTGCTaGAAAGATGAGTCCCACGGG +
Preference number: 4 (lower is better)
Translates to: PEGRLPRVDDKTHPLEHTGPGWC*KDESHG
Trigger: CCCGTGGGACTCATCTTTGCAGCACCACCCCGGACC...CGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GCCCGGCCTCAGTGGCAGGAGCCGTGTCCTCCCTCGGTCACTTGCTCTGAGTTTACTGGAACACACGCCTaGTGCATGCAGGCGTCTGAG +
Preference number: 4 (lower is better)
Translates to: ARPQWQEPCPPSVTCSEFTGTHA*CMQASE
Trigger: CTCAGACGCCTGCATGCAGCAGGCGTGTGTTCCAGT...AAACTCAGAGCAAGTGACCGAGGGAGGACACGGCTCCTGCCACTGAGGCCGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp AGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGTCACCATGACATCCAGTaGTCTCCACTGGCAAGGGCT +
Preference number: 4 (lower is better)
Translates to: RSRRTFRWALLLCAARPRHHDIQ*SPLARA
Trigger: AGCCCTTGCCAGTGGAGAGCACTGGATGTCATGGTG...ACGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp AGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGTAAGCACGTGGTCAGCTaGCCTGTGGCTTCCTTGGAA +
Preference number: 4 (lower is better)
Translates to: RSRRTFRWALLLCAARPRKHVVS*PVASLE
Trigger: TTCCAAGGAAGCCACAGGGCAGCTGACCACGTGCTT...ACGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCCCTTCCACTCGTGGGAGGAGGCCTCACTTGACTGCCTaGTCCCTGTGTCTGGCGCCA +
Preference number: 4 (lower is better)
Translates to: VVSCPVASLETPSTRGRRPHLTA*SLCLAP
Trigger: TGGCGCCAGACACAGGGAGCAGGCAGTCAAGTGAGG...CCTCCTCCCACGAGTGGAAGGGGTTTCCAAGGAAGCCACAGGGCAGCTGACCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GCCCGGCCTCAGTGGCAGGAGCCGTGTCCTCCCTCGGTCACTTGCTCTGAGTTTCAGACCTCACTTGACTaGCTGCTCCCTGTGTCTGGC +
Preference number: 4 (lower is better)
Translates to: ARPQWQEPCPPSVTCSEFQTSLD*LLPVSG
Trigger: GCCAGACACAGGGAGCAGGCAGTCAAGTGAGGTCTG...AAACTCAGAGCAAGTGACCGAGGGAGGACACGGCTCCTGCCACTGAGGCCGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp TGGCGCCAGGACAGTGCTGGGCATCAGGTGCCCGGCCTCAGTGGCAGGAGCCGTAGCACAGTGATCACATaGACAGTCCGAGATTCCTGG +
Preference number: 4 (lower is better)
Translates to: WRQDSAGHQVPGLSGRSRSTVIT*TVRDSW
Trigger: CCAGGAATCTCGGACTGTGCATGTGATCACTGTGCT...ACGGCTCCTGCCACTGAGGCCGGGCACCTGATGCCCAGCACTGTCCTGGCGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp TTGGTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGCCACCCGAGCTGAGTCCCAGCCGCATCTGTGCTGTTaGGGAAACAGGCCTTGTGGA +
Preference number: 4 (lower is better)
Translates to: LVRVVVAVPCSATRAESQPHLCC*GNRPCG
Trigger: TCCACAAGGCCTGTTTCCCCAACAGCACAGATGCGG...CTGGGACTCAGCTCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGACCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp AGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGTCCGCATCTGTGCTGTTaGGGAAACAGGCCTTGTGGA +
Preference number: 4 (lower is better)
Translates to: RSRRTFRWALLLCAARPRPHLCC*GNRPCG
Trigger: TCCACAAGGCCTGTTTCCCCAACAGCACAGATGCGG...ACGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTCTTGGTCAGGGTGGTGGTCCCTCTCTCGCTCCTTaGCAAACTCCCCCGAGAGCA +
Preference number: 4 (lower is better)
Translates to: RLSGHGAASTSGLGQGGGPSLAP*QTPPRA
Trigger: TGCTCTCGGGGGAGTTTGCCAAGGAGCGAGAGAGGG...ACCACCACCCTGACCAAGACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp CCTGCTGCATGCAGGCGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTCTTCCCTCTCTCGCTCCTTaGCAAACTCCCCCGAGAGCA +
Preference number: 4 (lower is better)
Translates to: PAACRRLSGHGAASTSGLPSLAP*QTPPRA
Trigger: TGCTCTCGGGGGAGTTTGCCAAGGAGCGAGAGAGGG...AAGACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACGCCTGCATGCAGCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp TCGGCCACCCGAGCTGAGTCCCAGGGTGCAGTGGTAACCGTTGGGCACGCGGCGCATTTCTGCTCTTCTTaGTGGCCGCTCTCTTCAGCA +
Preference number: 4 (lower is better)
Translates to: SATRAESQGAVVTVGHAAHFCSS*WPLSSA
Trigger: TGCTGAAGAGAGCGGCCACCAAGAAGAGCAGAAATG...CGCCGCGTGCCCAACGGTTACCACTGCACCCTGGGACTCAGCTCGGGTGGCCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp ACCCGAGCTGAGTCCCAGGGTGCAGTGGTAACCGTTGGGCACGCGGCGGAGAGGGTGGGAGTCTCATCCTaGAAGTTGAACTGTCCCCCA +
Preference number: 4 (lower is better)
Translates to: TRAESQGAVVTVGHAAERVGVSS*KLNCPP
Trigger: TGGGGGACAGTTCAACTTCCAGGATGAGACTCCCAC...CCTCTCCGCCGCGTGCCCAACGGTTACCACTGCACCCTGGGACTCAGCTCGGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp CCCCTCCGTCCCGAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCGTGGGAGTCTCATCCTaGAAGTTGAACTGTCCCCCA +
Preference number: 4 (lower is better)
Translates to: PLRPEVSAHFQVGPASLCVGVSS*KLNCPP
Trigger: TGGGGGACAGTTCAACTTCCAGGATGAGACTCCCAC...GCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTCGGGACGGAGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CGGTTTAGGGTCTGGTGTGTGGTACGAGACCCAGGAAGGCAGGACAGGAAGGGGGCTGCCTGGCGGCGATaGAGATGTTCGCGGCAGACA +
Preference number: 4 (lower is better)
Translates to: RFRVWCVVRDPGRQDRKGAAWRR*RCSRQT
Trigger: TGTCTGCCGCGAACATCTCCATCGCCGCCAGGCAGC...CCCCTTCCTGTCCTGCCTTCCTGGGTCTCGTACCACACACCAGACCCTAAACCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GCGGTCACGGTGCAGCTAGCACCAGTGGTCTTGGTCAGGGTGGTGGTAGCTGTGCCGAGTTCTGCTGCCTaGCGGCGATGGAGATGTTCG +
Preference number: 4 (lower is better)
Translates to: AVTVQLAPVVLVRVVVAVPSSAA*RRWRCS
Trigger: CGAACATCTCCATCGCCGCCAGGCAGCAGAACTCGG...CACAGCTACCACCACCCTGACCAAGACCACTGGTGCTAGCTGCACCGTGACCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp GCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGTTCTGCAGCCGTAGCTaGCTGGCCCGCTGCTCCCAC +
Preference number: 4 (lower is better)
Translates to: AGCPVWMIKLIHWNTRLLFCSRS*LARCSH
Trigger: GTGGGAGCAGCGGGCCAGCCAGCTACGGCTGCAGAA...CAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGCATGCAGGCTTGTCGCGGTGCCGGTaGTGCCTGCGCGGAGGGTCG +
Preference number: 4 (lower is better)
Translates to: PVWMIKLIHWNTRLLHAGLSRCR*CLRGGS
Trigger: CGACCCTCCGCGCAGGCACCACCGGCACCGCGACAA...GCCTGCATGCAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GCTGAGTCCCAGGGTGCAGTGGTAACCGTTGGGCACGCGGCGGAGAGGGTGAGACAGTCACAGTCCCACTaGTCTCCAGGTCACAGTGTG +
Preference number: 4 (lower is better)
Translates to: AESQGAVVTVGHAAERVRQSQSH*SPGHSV
Trigger: CACACTGTGACCTGGAGACCAGTGGGACTGTGACTG...TCTCACCCTCTCCGCCGCGTGCCCAACGGTTACCACTGCACCCTGGGACTCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp TGGCGCCAGGACAGTGCTGGGCATCAGGTGCCCGGCCTCAGTGGCAGGAGCCGTCCCTCTCCAGCTCCTTaGATTCATCTGTGCAGTAGA +
Preference number: 4 (lower is better)
Translates to: WRQDSAGHQVPGLSGRSRPSPAP*IHLCSR
Trigger: TCTACTGCACAGATGAATCCAAGGAGCTGGAGAGGG...ACGGCTCCTGCCACTGAGGCCGGGCACCTGATGCCCAGCACTGTCCTGGCGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GCCCGGCCTCAGTGGCAGGAGCCGTGTCCTCCCTCGGTCACTTGCTCTGAGTTTAGTGTTTCAGCACCATaGGCCAGCCTTCTCCCGTGG +
Preference number: 4 (lower is better)
Translates to: ARPQWQEPCPPSVTCSEFSVSAP*ASLLPW
Trigger: CCACGGGAGAAGGCTGGCCCATGGTGCTGAAACACT...AAACTCAGAGCAAGTGACCGAGGGAGGACACGGCTCCTGCCACTGAGGCCGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTCTTGGTCAGGGTGGTGGTGCGGTACCCAGGGCTTaGACCCTGCTCCTCATAGGT +
Preference number: 4 (lower is better)
Translates to: RLSGHGAASTSGLGQGGGAVPRA*TLLLIG
Trigger: ACCTATGAGGAGCAGGGTCCAAGCCCTGGGTACCGC...ACCACCACCCTGACCAAGACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp GCACCAGTGGTCTTGGTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGCCACCCGAAACGACTGCCGGTTTTaGGGCATGTACCGTGTCAGG +
Preference number: 4 (lower is better)
Translates to: APVVLVRVVVAVPCSATRNDCRF*GMYRVR
Trigger: CCTGACACGGTACATGCCCCAAAACCGGCAGTCGTT...TCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGACCAAGACCACTGGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp AGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGTAACGACTGCCGGTTTTaGGGCATGTACCGTGTCAGG +
Preference number: 4 (lower is better)
Translates to: RSRRTFRWALLLCAARPRNDCRF*GMYRVR
Trigger: CCTGACACGGTACATGCCCCAAAACCGGCAGTCGTT...ACGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp TCGGCCACCCGAGCTGAGTCCCAGGGTGCAGTGGTAACCGTTGGGCACGCGGCGGTCCACGTCTTATACTaGAACGACTGCCGGTTTTGG +
Preference number: 4 (lower is better)
Translates to: SATRAESQGAVVTVGHAAVHVLY*NDCRFW
Trigger: CCAAAACCGGCAGTCGTTCCAGTATAAGACGTGGAC...CGCCGCGTGCCCAACGGTTACCACTGCACCCTGGGACTCAGCTCGGGTGGCCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp GTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGCCACCCGAGCTGAGTCCCAGGGTGTCCGGAAGTTGTTGTaGCGGTTGATGCTGGTGTCA +
Preference number: 4 (lower is better)
Translates to: VRVVVAVPCSATRAESQGVRKLL*RLMLVS
Trigger: TGACACCAGCATCAACCGCCACAACAACTTCCGGAC...ACCCTGGGACTCAGCTCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp GCTGTGCCGTGCTCGGCCACCCGAGCTGAGTCCCAGGGTGCAGTGGTAACCGTTCACTTCCACACTCGGTaGCATTGGCCTGCTCATCAC +
Preference number: 4 (lower is better)
Translates to: AVPCSATRAESQGAVVTVHFHTR*HWPAHH
Trigger: GTGATGAGCAGGCCAATGCCACCGAGTGTGGAAGTG...AACGGTTACCACTGCACCCTGGGACTCAGCTCGGGTGGCCGAGCACGGCACAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp GAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGGGAGCCTGCTGCATCTaGTCTCTGGTGGTTTTGTTC +
Preference number: 4 (lower is better)
Translates to: EVSAHFQVGPASLCRTATGACCI*SLVVLF
Trigger: GAACAAAACCACCAGAGACCAGATGCAGCAGGCTCC...CGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GGATTCTCGACCCAACACTGCCTGGGGAAATGGCTGTGGTTCTGCATGGAATGGGAGGCCGCTCGACCCTaGCTCTCCAGCCCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: GFSTQHCLGKWLWFCMEWEAARP*LSSPGW
Trigger: CCAGCCTGGGCTGGAGAGCCAGGGTCGAGCGGCCTC...CCATTCCATGCAGAACCACAGCCATTTCCCCAGGCAGTGTTGGGTCGAGAATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GAAAATGCCTCACACAAGCACGTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCGTCCCACGGGGCCGCTaGGCCAGCGTGGAGATGGAG +
Preference number: 4 (lower is better)
Translates to: ENASHKHVVSCPVASLETVPRGR*ASVEME
Trigger: CTCCATCTCCACGCTGGCCCAGCGGCCCCGTGGGAC...GGTTTCCAAGGAAGCCACAGGGCAGCTGACCACGTGCTTGTGTGAGGCATTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGCATGCAGGCTGGTGCGACGACGCCTaGCTAGGGGGTGGGCGGTCC +
Preference number: 4 (lower is better)
Translates to: PVWMIKLIHWNTRLLHAGWCDDA*LGGGRS
Trigger: GGACCGCCCACCCCCTAGCCAGGCGTCGTCGCACCA...GCCTGCATGCAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CTCGTGGGAGGAGGACAGCAAATGGCTGCCTTGTTTGCCACCATGACATCCAGTTGGTGCGACGACGCCTaGCTAGGGGGTGGGCGGTCC +
Preference number: 4 (lower is better)
Translates to: LVGGGQQMAALFATMTSSWCDDA*LGGGRS
Trigger: GGACCGCCCACCCCCTAGCCAGGCGTCGTCGCACCA...ACTGGATGTCATGGTGGCAAACAAGGCAGCCATTTGCTGTCCTCCTCCCACGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTCAGCGGTGGTGGTGGTaGTGCGACGACGCCTGGCTA +
Preference number: 4 (lower is better)
Translates to: EGRLPRVDDKTHPLEHTPQRWWW*CDDAWL
Trigger: TAGCCAGGCGTCGTCGCACCACCACCACCACCGCTG...AGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GAAAATGCCTCACACAAGCACGTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCCGGTGGCAGCGGTGGTaGTGGTGGTGCGACGACGCC +
Preference number: 4 (lower is better)
Translates to: ENASHKHVVSCPVASLETRWQRW*WWCDDA
Trigger: GGCGTCGTCGCACCACCACCACCACCGCTGCCACCG...GGTTTCCAAGGAAGCCACAGGGCAGCTGACCACGTGCTTGTGTGAGGCATTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CCCGAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGGTTGGCGACGTTGGGTaGCTGCTGAGGGAGGGCTTG +
Preference number: 4 (lower is better)
Translates to: PEGRLPRVDDKTHPLEHTVGDVG*LLREGL
Trigger: CAAGCCCTCCCTCAGCAGCCACCCAACGTCGCCAAC...CGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CGGTTTAGGGTCTGGTGTGTGGTACGAGACCCAGGAAGGCAGGACAGGAAGGGGCTCCTGGCCAGCTGTTaGCGACGTTGGGTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: RFRVWCVVRDPGRQDRKGLLASC*RRWVAA
Trigger: AGCAGCCACCCAACGTCGCCAACAGCTGGCCAGGAG...CCCCTTCCTGTCCTGCCTTCCTGGGTCTCGTACCACACACCAGACCCTAAACCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GCTTGCCTGAGTGAGCATTCGCTGACACTGGCGGGCTGCACAAGCCACGACTGTTCCTCAGGCAGGGCGTaGACAGAGGCCTCACTGTCC +
Preference number: 4 (lower is better)
Translates to: ACLSEHSLTLAGCTSHDCSSGRA*TEASLS
Trigger: GGACAGTGAGGCCTCTGTCCACGCCCTGCCTGAGGA...ACAGTCGTGGCTTGTGCAGCCCGCCAGTGTCAGCGAATGCTCACTCAGGCAAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp TTGGTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGCCACCCGAGCTGAGTCCCAGGCCGGCTGCCCCGTGTaGATGATAAAACTCATCCAC +
Preference number: 4 (lower is better)
Translates to: LVRVVVAVPCSATRAESQAGCPV*MIKLIH
Trigger: GTGGATGAGTTTTATCATCCACACGGGGCAGCCGGC...CTGGGACTCAGCTCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGACCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp TGGCGCCAGGACAGTGCTGGGCATCAGGTGCCCGGCCTCAGTGGCAGGAGCCGTCATATACTCGAATGGTaGCCACTCGGTGATGCGCTT +
Preference number: 4 (lower is better)
Translates to: WRQDSAGHQVPGLSGRSRHILEW*PLGDAL
Trigger: AAGCGCATCACCGAGTGGCCACCATTCGAGTATATG...ACGGCTCCTGCCACTGAGGCCGGGCACCTGATGCCCAGCACTGTCCTGGCGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371355.8
CDS-3UTR CCA 90 bp GGATTCTCGACCCAACACTGCCTGGGGAAATGGCTGTGGTTCTGCATGGAATGGGGAGTCAGGGGCGTCTaGGGGAGCTGCCTCCGCCCA +
Preference number: 4 (lower is better)
Translates to: GFSTQHCLGKWLWFCMEWGVRGV*GSCLRP
Trigger: TGGGCGGAGGCAGCTCCCCCAGACGCCCCTGACTCC...CCATTCCATGCAGAACCACAGCCATTTCCCCAGGCAGTGTTGGGTCGAGAATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GCTTGCCTGAGTGAGCATTCGCTGACACTGGCGGGCTGCACAAGCCACGACTGTCCGTCTACGTCCACCTaGACCGGACAGGGCTGCACA +
Preference number: 4 (lower is better)
Translates to: ACLSEHSLTLAGCTSHDCPSTST*TGQGCT
Trigger: TGTGCAGCCCTGTCCGGTCCAGGTGGACGTAGACGG...ACAGTCGTGGCTTGTGCAGCCCGCCAGTGTCAGCGAATGCTCACTCAGGCAAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GCCCGGCCTCAGTGGCAGGAGCCGTGTCCTCCCTCGGTCACTTGCTCTGAGTTTTGGCGGTCAGGCACTTaGTCAAGAGCAGCAGAGCCA +
Preference number: 4 (lower is better)
Translates to: ARPQWQEPCPPSVTCSEFWRSGT*SRAAEP
Trigger: TGGCTCTGCTGCTCTTGACCAAGTGCCTGACCGCCA...AAACTCAGAGCAAGTGACCGAGGGAGGACACGGCTCCTGCCACTGAGGCCGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CCACGTGAAGGGTGCTCCCCACAGGACGCAGAGCTCCTCACAACGGCTCCAAGCGCCCTGTGGCTTCCTTaGAAACCCCTTCCACTCGTG +
Preference number: 4 (lower is better)
Translates to: PREGCSPQDAELLTTAPSALWLP*KPLPLV
Trigger: CACGAGTGGAAGGGGTTTCCAAGGAAGCCACAGGGC...GCTTGGAGCCGTTGTGAGGAGCTCTGCGTCCTGTGGGGAGCACCCTTCACGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CTCGTGGGAGGAGGACAGCAAATGGCTGCCTTGTTTGCCACCATGACATCCAGTGGTGCCCGGCCTCAGTaGCAGGAGCCGTGTCCTCCC +
Preference number: 4 (lower is better)
Translates to: LVGGGQQMAALFATMTSSGARPQ*QEPCPP
Trigger: GGGAGGACACGGCTCCTGCCACTGAGGCCGGGCACC...ACTGGATGTCATGGTGGCAAACAAGGCAGCCATTTGCTGTCCTCCTCCCACGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GGATTCTCGACCCAACACTGCCTGGGGAAATGGCTGTGGTTCTGCATGGAATGGGGTGCCCGGCCTCAGTaGCAGGAGCCGTGTCCTCCC +
Preference number: 4 (lower is better)
Translates to: GFSTQHCLGKWLWFCMEWGARPQ*QEPCPP
Trigger: GGGAGGACACGGCTCCTGCCACTGAGGCCGGGCACC...CCATTCCATGCAGAACCACAGCCATTTCCCCAGGCAGTGTTGGGTCGAGAATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp AGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGTACACCCAAGATAACATaGGCTGGGGGCTGGGGAACA +
Preference number: 4 (lower is better)
Translates to: RSRRTFRWALLLCAARPRTPKIT*AGGWGT
Trigger: TGTTCCCCAGCCCCCAGCCCATGTTATCTTGGGTGT...ACGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp TCCAGGGAGGACAGAGCTTGCCTGAGTGAGCATTCGCTGACACTGGCGGGCTGCACTCCAGGTACCCGTTaGGCTCTCGCTCGATCTGCT +
Preference number: 4 (lower is better)
Translates to: SREDRACLSEHSLTLAGCTPGTR*ALARSA
Trigger: AGCAGATCGAGCGAGAGCTCAACGGGTACCTGGAGT...GCAGCCCGCCAGTGTCAGCGAATGCTCACTCAGGCAAGCTCTGTCCTCCCTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp CGGTTTAGGGTCTGGTGTGTGGTACGAGACCCAGGAAGGCAGGACAGGAAGGGGGGATCTGGAAGACAGTaGGGATGGCGGCAGGGAAGG +
Preference number: 4 (lower is better)
Translates to: RFRVWCVVRDPGRQDRKGGSGRQ*GWRQGR
Trigger: CCTTCCCTGCCGCCATCCTCACTGTCTTCCAGATCC...CCCCTTCCTGTCCTGCCTTCCTGGGTCTCGTACCACACACCAGACCCTAAACCG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp ACGCCTGCTGCATGCAGGCGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTAGAACATGCCTTTGCTaGCGCCGCCTTGCGATTCGA +
Preference number: 4 (lower is better)
Translates to: TPAACRRLSGHGAASTSGRTCLC*RRLAIR
Trigger: TCGAATCGCAAGGCGGCGTCAGCAAAGGCATGTTCT...ACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACGCCTGCATGCAGCAGGCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR TCA 90 bp GAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTTTCTCCACAGCCTCGTaGGCAGGCTGCGCCTTGTGC +
Preference number: 4 (lower is better)
Translates to: EGRLPRVDDKTHPLEHTPFSTAS*AGCALC
Trigger: GCACAAGGCGCAGCCTGCTCACGAGGCTGTGGAGAA...AGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp TCCAGGGAGGACAGAGCTTGCCTGAGTGAGCATTCGCTGACACTGGCGGGCTGCCGAGTGACGTTCCGCTaGTTGTCTGCATCCTCTGGC +
Preference number: 4 (lower is better)
Translates to: SREDRACLSEHSLTLAGCRVTFR*LSASSG
Trigger: GCCAGAGGATGCAGACAATCAGCGGAACGTCACTCG...GCAGCCCGCCAGTGTCAGCGAATGCTCACTCAGGCAAGCTCTGTCCTCCCTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp TCCAGGGAGGACAGAGCTTGCCTGAGTGAGCATTCGCTGACACTGGCGGGCTGCGACTGCCCATGCGAGTaGCGTTCCGCTGATTGTCTG +
Preference number: 4 (lower is better)
Translates to: SREDRACLSEHSLTLAGCDCPCE*RSADCL
Trigger: CAGACAATCAGCGGAACGTCACTCGCATGGGCAGTC...GCAGCCCGCCAGTGTCAGCGAATGCTCACTCAGGCAAGCTCTGTCCTCCCTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GCTGTGCCGTGCTCGGCCACCCGAGCTGAGTCCCAGGGTGCAGTGGTAACCGTTAGAACAGCATGGCAATaGGCAGACACACGTAGGGCA +
Preference number: 4 (lower is better)
Translates to: AVPCSATRAESQGAVVTVRTAWQ*ADTRRA
Trigger: TGCCCTACGTGTGTCTGCTCATTGCCATGCTGTTCT...AACGGTTACCACTGCACCCTGGGACTCAGCTCGGGTGGCCGAGCACGGCACAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR TCA 90 bp AGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGTAGAACAGCATGGCAATaGGCAGACACACGTAGGGCA +
Preference number: 4 (lower is better)
Translates to: RSRRTFRWALLLCAARPRRTAWQ*ADTRRA
Trigger: TGCCCTACGTGTGTCTGCTCATTGCCATGCTGTTCT...ACGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp TGGCGCCAGGACAGTGCTGGGCATCAGGTGCCCGGCCTCAGTGGCAGGAGCCGTAGGAGCACAGGAAGATaGAGGAGACGAAGTAGAAGT +
Preference number: 4 (lower is better)
Translates to: WRQDSAGHQVPGLSGRSRRSTGR*RRRSRS
Trigger: ACTTCTACTTCGTCTCCTTCATCTTCCTGTGCTCCT...ACGGCTCCTGCCACTGAGGCCGGGCACCTGATGCCCAGCACTGTCCTGGCGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp TTGGTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGCCACCCGAGCTGAGTCCCAGCCATCAGCGTGGACGTaGAGTGAACAGTCATGTCCT +
Preference number: 4 (lower is better)
Translates to: LVRVVVAVPCSATRAESQPSAWT*SEQSCP
Trigger: AGGACATGACTGTTCACTTCACGTCCACGCTGATGG...CTGGGACTCAGCTCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGACCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR TCA 90 bp CCCGAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCAGCCTCCTCGAAAGTaGGAGTGTCCTCAGGCAGGG +
Preference number: 4 (lower is better)
Translates to: PEGRLPRVDDKTHPLEHTQPPRK*ECPQAG
Trigger: CCCTGCCTGAGGACACTCTCACTTTCGAGGAGGCTG...CGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp CCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGCATGCAGGCACGCGGCGGAGAGGGTaGGACTGGGAGGTCAGGGAG +
Preference number: 4 (lower is better)
Translates to: PVWMIKLIHWNTRLLHAGTRRRG*DWEVRE
Trigger: CTCCCTGACCTCCCAGTCTCACCCTCTCCGCCGCGT...GCCTGCATGCAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GAAAATGCCTCACACAAGCACGTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCCTCGGCCACCCGAGCTaGGTCCCAGGGTGCAGTGGT +
Preference number: 4 (lower is better)
Translates to: ENASHKHVVSCPVASLETLGHPS*VPGCSG
Trigger: ACCACTGCACCCTGGGACTCAGCTCGGGTGGCCGAG...GGTTTCCAAGGAAGCCACAGGGCAGCTGACCACGTGCTTGTGTGAGGCATTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GCCCGGCCTCAGTGGCAGGAGCCGTGTCCTCCCTCGGTCACTTGCTCTGAGTTTGCTAGCACCAGATGTTaGCAGCAAGGGGCTCCCATT +
Preference number: 4 (lower is better)
Translates to: ARPQWQEPCPPSVTCSEFASTRC*QQGAPI
Trigger: AATGGGAGCCCCTTGCTGTCAACATCTGGTGCTAGC...AAACTCAGAGCAAGTGACCGAGGGAGGACACGGCTCCTGCCACTGAGGCCGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTTGGCCGTCTTGTAGGTaGTGCTGGGGCGGGGAGTCA +
Preference number: 4 (lower is better)
Translates to: EGRLPRVDDKTHPLEHTPWPSCR*CWGGES
Trigger: TGACTCCCCGCCCCAGCATCACCTACAAGACGGCCA...AGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCCCTTCCACTCGTGGGAGGAGGACCCATGCTGGATGCTaGGTCCCAGGACACGGGATT +
Preference number: 4 (lower is better)
Translates to: VVSCPVASLETPSTRGRRTHAGC*VPGHGI
Trigger: AATCCCGTGTCCTGGGACTCAGCATCCAGCATGGGT...CCTCCTCCCACGAGTGGAAGGGGTTTCCAAGGAAGCCACAGGGCAGCTGACCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp CCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGCATGCAGGCTGCCGCACGGCCACGTaGAGGGTGCTCCCCACAGGA +
Preference number: 4 (lower is better)
Translates to: PVWMIKLIHWNTRLLHAGCRTAT*RVLPTG
Trigger: TCCTGTGGGGAGCACCCTTCACGTGGCCGTGCGGCA...GCCTGCATGCAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp CTCGTGGGAGGAGGACAGCAAATGGCTGCCTTGTTTGCCACCATGACATCCAGTTGCCGCACGGCCACGTaGAGGGTGCTCCCCACAGGA +
Preference number: 4 (lower is better)
Translates to: LVGGGQQMAALFATMTSSCRTAT*RVLPTG
Trigger: TCCTGTGGGGAGCACCCTTCACGTGGCCGTGCGGCA...ACTGGATGTCATGGTGGCAAACAAGGCAGCCATTTGCTGTCCTCCTCCCACGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GCTAGGCTGTGTGGGTTTAGAAAAGTGGATTCTCGACCCAACACTGCCTGGGGACCAGGAGCCTGGGTGTaGGGGCCTGGCGGTCAGGCA +
Preference number: 4 (lower is better)
Translates to: ARLCGFRKVDSRPNTAWGPGAWV*GPGGQA
Trigger: TGCCTGACCGCCAGGCCCTCACACCCAGGCTCCTGG...TCCCCAGGCAGTGTTGGGTCGAGAATCCACTTTTCTAAACCCACACAGCCTAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp TCTTCACCAAACAAGGGACCTCCCAGCATCTTGTGCACCTTGGACAGTGTCCTGCCAGGAGCCTGGGTGTaGGGGCCTGGCGGTCAGGCA +
Preference number: 4 (lower is better)
Translates to: SSPNKGPPSILCTLDSVLPGAWV*GPGGQA
Trigger: TGCCTGACCGCCAGGCCCTCACACCCAGGCTCCTGG...CAGGACACTGTCCAAGGTGCACAAGATGCTGGGAGGTCCCTTGTTTGGTGAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCCCTTCCACTCGTGGGAGGAGGTGGTCACAATCATGCTaGACCCCGAGACCAGGCAGC +
Preference number: 4 (lower is better)
Translates to: VVSCPVASLETPSTRGRRWSQSC*TPRPGS
Trigger: GCTGCCTGGTCTCGGGGTTCAGCATGATTGTGACCA...CCTCCTCCCACGAGTGGAAGGGGTTTCCAAGGAAGCCACAGGGCAGCTGACCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp AGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGTGGATCAGGTCATTTCTaGTCTTCTTGGTGGCCGCTC +
Preference number: 4 (lower is better)
Translates to: RSRRTFRWALLLCAARPRGSGHF*SSWWPL
Trigger: GAGCGGCCACCAAGAAGAGCAGAAATGACCTGATCC...ACGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp CCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGCATGCAGGCCGCCGGCGCACTCCTTaGTCGGATCCTGGTGCCGGT +
Preference number: 4 (lower is better)
Translates to: PVWMIKLIHWNTRLLHAGRRRTP*SDPGAG
Trigger: ACCGGCACCAGGATCCGAGCAAGGAGTGCGCCGGCG...GCCTGCATGCAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GGATTCTCGACCCAACACTGCCTGGGGAAATGGCTGTGGTTCTGCATGGAATGGCGCCGGCGCACTCCTTaGTCGGATCCTGGTGCCGGT +
Preference number: 4 (lower is better)
Translates to: GFSTQHCLGKWLWFCMEWRRRTP*SDPGAG
Trigger: ACCGGCACCAGGATCCGAGCAAGGAGTGCGCCGGCG...CCATTCCATGCAGAACCACAGCCATTTCCCCAGGCAGTGTTGGGTCGAGAATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp CCTGCTGCATGCAGGCGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTCTTGTGCTGGGCAGTGTGTaGATGGGACCCACAGTCACA +
Preference number: 4 (lower is better)
Translates to: PAACRRLSGHGAASTSGLVLGSV*MGPTVT
Trigger: TGTGACTGTGGGTCCCATGCACACACTGCCCAGCAC...AAGACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACGCCTGCATGCAGCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR GCA 90 bp TCCAGGGAGGACAGAGCTTGCCTGAGTGAGCATTCGCTGACACTGGCGGGCTGCCCTTCTGGAGACAGGTaGTGGGCAGTGTGTGCATGG +
Preference number: 4 (lower is better)
Translates to: SREDRACLSEHSLTLAGCPSGDR*WAVCAW
Trigger: CCATGCACACACTGCCCAGCACCTGTCTCCAGAAGG...GCAGCCCGCCAGTGTCAGCGAATGCTCACTCAGGCAAGCTCTGTCCTCCCTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp AGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGTGTTCCGCTGATTGTCTaGATCCTCTGGCTGTTCCTC +
Preference number: 4 (lower is better)
Translates to: RSRRTFRWALLLCAARPRVPLIV*ILWLFL
Trigger: GAGGAACAGCCAGAGGATGCAGACAATCAGCGGAAC...ACGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GCGGTCACGGTGCAGCTAGCACCAGTGGTCTTGGTCAGGGTGGTGGTAGCTGTGAGATGGACAGCTCCATaGGGTACCCAGGGCTTGGAC +
Preference number: 4 (lower is better)
Translates to: AVTVQLAPVVLVRVVVAVRWTAP*GTQGLD
Trigger: GTCCAAGCCCTGGGTACCGCATGGAGCTGTCCATCT...CACAGCTACCACCACCCTGACCAAGACCACTGGTGCTAGCTGCACCGTGACCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR GCA 90 bp CGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTCTTGGTCAGGGTGGTGGTCAGCTTGATCTCCAGTaGCGTCCGGATGAGGGCCAT +
Preference number: 4 (lower is better)
Translates to: RLSGHGAASTSGLGQGGGQLDLQ*RPDEGH
Trigger: ATGGCCCTCATCCGGACGGCACTGGAGATCAAGCTG...ACCACCACCCTGACCAAGACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR GCA 90 bp GTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCCCTTCCACTCGTGGGAGGAGGCAGCTTGATCTCCAGTaGCGTCCGGATGAGGGCCAT +
Preference number: 4 (lower is better)
Translates to: VVSCPVASLETPSTRGRRQLDLQ*RPDEGH
Trigger: ATGGCCCTCATCCGGACGGCACTGGAGATCAAGCTG...CCTCCTCCCACGAGTGGAAGGGGTTTCCAAGGAAGCCACAGGGCAGCTGACCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp CCCGAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGAGGCCTCCAGGAGCCTaGTGCATCTGGTCTCTGGTG +
Preference number: 4 (lower is better)
Translates to: PEGRLPRVDDKTHPLEHTRPPGA*CIWSLV
Trigger: CACCAGAGACCAGATGCAGCAGGCTCCTGGAGGCCT...CGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp CGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTCTTGGTCAGGGTGGTGGTGGCCCCTCCGGGTTATaGTCTGCATCTGAACGTCCA +
Preference number: 4 (lower is better)
Translates to: RLSGHGAASTSGLGQGGGGPSGL*SASERP
Trigger: TGGACGTTCAGATGCAGAGCATAACCCGGAGGGGCC...ACCACCACCCTGACCAAGACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR GCA 90 bp GCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGGGTCCGGGGTGGTGCTaGAAAGATGAGTCCCACGGG +
Preference number: 4 (lower is better)
Translates to: AGCPVWMIKLIHWNTRLLGPGWC*KDESHG
Trigger: CCCGTGGGACTCATCTTTGCAGCACCACCCCGGACC...CAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGGGCGGTCCGGGGTGGTaGTGCAAAGATGAGTCCCAC +
Preference number: 4 (lower is better)
Translates to: AGCPVWMIKLIHWNTRLLGGPGW*CKDESH
Trigger: GTGGGACTCATCTTTGCAGCACCACCCCGGACCGCC...CAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp CTCGTGGGAGGAGGACAGCAAATGGCTGCCTTGTTTGCCACCATGACATCCAGTCGGTGGTGGTGGTGGTaGGACGACGCCTGGCTAGGG +
Preference number: 4 (lower is better)
Translates to: LVGGGQQMAALFATMTSSRWWWW*DDAWLG
Trigger: CCCTAGCCAGGCGTCGTCGCACCACCACCACCACCG...ACTGGATGTCATGGTGGCAAACAAGGCAGCCATTTGCTGTCCTCCTCCCACGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GAAAATGCCTCACACAAGCACGTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCCGGTGGTGGTGGTGGTaGGACGACGCCTGGCTAGGG +
Preference number: 4 (lower is better)
Translates to: ENASHKHVVSCPVASLETRWWWW*DDAWLG
Trigger: CCCTAGCCAGGCGTCGTCGCACCACCACCACCACCG...GGTTTCCAAGGAAGCCACAGGGCAGCTGACCACGTGCTTGTGTGAGGCATTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp CCCGAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCGGCCCCACAGCACTaGTTGGTGCGCCATCCATAT +
Preference number: 4 (lower is better)
Translates to: PEGRLPRVDDKTHPLEHTPAPQH*LVRHPY
Trigger: ATATGGATGGCGCACCAAGCAGTGCTGTGGGGCCGG...CGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp CGGTTTAGGGTCTGGTGTGTGGTACGAGACCCAGGAAGGCAGGACAGGAAGGGGCCGGCCCCACAGCACTaGTTGGTGCGCCATCCATAT +
Preference number: 4 (lower is better)
Translates to: RFRVWCVVRDPGRQDRKGPAPQH*LVRHPY
Trigger: ATATGGATGGCGCACCAAGCAGTGCTGTGGGGCCGG...CCCCTTCCTGTCCTGCCTTCCTGGGTCTCGTACCACACACCAGACCCTAAACCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GAAAATGCCTCACACAAGCACGTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCGAGGAGGATGAGGGCTaGCTCCGCTCCTGGGACCGG +
Preference number: 4 (lower is better)
Translates to: ENASHKHVVSCPVASLETEEDEG*LRSWDR
Trigger: CCGGTCCCAGGAGCGGAGGCAGCCCTCATCCTCCTC...GGTTTCCAAGGAAGCCACAGGGCAGCTGACCACGTGCTTGTGTGAGGCATTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp CGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTCTTGGTCAGGGTGGTGGTACTGGAACACACGCCTaGTGCATGCAGGCGTCTGAG +
Preference number: 4 (lower is better)
Translates to: RLSGHGAASTSGLGQGGGTGTHA*CMQASE
Trigger: CTCAGACGCCTGCATGCAGCAGGCGTGTGTTCCAGT...ACCACCACCCTGACCAAGACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR GCA 90 bp TCCAGGGAGGACAGAGCTTGCCTGAGTGAGCATTCGCTGACACTGGCGGGCTGCACTGGAACACACGCCTaGTGCATGCAGGCGTCTGAG +
Preference number: 4 (lower is better)
Translates to: SREDRACLSEHSLTLAGCTGTHA*CMQASE
Trigger: CTCAGACGCCTGCATGCAGCAGGCGTGTGTTCCAGT...GCAGCCCGCCAGTGTCAGCGAATGCTCACTCAGGCAAGCTCTGTCCTCCCTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGCCCCCGAGGGCCGGCTaGCCCGTGTGGATGATAAAA +
Preference number: 4 (lower is better)
Translates to: AGCPVWMIKLIHWNTRLLPPRAG*PVWMIK
Trigger: TTTTATCATCCACACGGGGCAGCCGGCCCTCGGGGG...CAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp CCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGCATGCAGGCCTGGCGCCAGGACAGTaGTGGGCATCAGGTGCCCGG +
Preference number: 4 (lower is better)
Translates to: PVWMIKLIHWNTRLLHAGLAPGQ*WASGAR
Trigger: CCGGGCACCTGATGCCCAGCACTGTCCTGGCGCCAG...GCCTGCATGCAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp TCCAGGGAGGACAGAGCTTGCCTGAGTGAGCATTCGCTGACACTGGCGGGCTGCCAGACCTCACTTGACTaGCTGCTCCCTGTGTCTGGC +
Preference number: 4 (lower is better)
Translates to: SREDRACLSEHSLTLAGCQTSLD*LLPVSG
Trigger: GCCAGACACAGGGAGCAGGCAGTCAAGTGAGGTCTG...GCAGCCCGCCAGTGTCAGCGAATGCTCACTCAGGCAAGCTCTGTCCTCCCTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCCCTTCCACTCGTGGGAGGAGGCAGACCTCACTTGACTaGCTGCTCCCTGTGTCTGGC +
Preference number: 4 (lower is better)
Translates to: VVSCPVASLETPSTRGRRQTSLD*LLPVSG
Trigger: GCCAGACACAGGGAGCAGGCAGTCAAGTGAGGTCTG...CCTCCTCCCACGAGTGGAAGGGGTTTCCAAGGAAGCCACAGGGCAGCTGACCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CACAGGAGCCTCACCAAGGTGGGCAAGGCCTCCCCCGAGGGCCGGCTGCCCCGTGGAACACCGTCAAGATaGCAAACAGGATATTGTCAA +
Preference number: 4 (lower is better)
Translates to: HRSLTKVGKASPEGRLPRGTPSR*QTGYCQ
Trigger: TTGACAATATCCTGTTTGCCATCTTGACGGTGTTCC...ACGGGGCAGCCGGCCCTCGGGGGAGGCCTTGCCCACCTTGGTGAGGCTCCTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CGGTTTAGGGTCTGGTGTGTGGTACGAGACCCAGGAAGGCAGGACAGGAAGGGGCCCTCTCTCGCTCCTTaGCAAACTCCCCCGAGAGCA +
Preference number: 4 (lower is better)
Translates to: RFRVWCVVRDPGRQDRKGPSLAP*QTPPRA
Trigger: TGCTCTCGGGGGAGTTTGCCAAGGAGCGAGAGAGGG...CCCCTTCCTGTCCTGCCTTCCTGGGTCTCGTACCACACACCAGACCCTAAACCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp AGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGTTTCTGCTCTTCTTGGTaGCCGCTCTCTTCAGCACGT +
Preference number: 4 (lower is better)
Translates to: RSRRTFRWALLLCAARPRFCSSW*PLSSAR
Trigger: ACGTGCTGAAGAGAGCGGCCACCAAGAAGAGCAGAA...ACGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GCTGTGCCGTGCTCGGCCACCCGAGCTGAGTCCCAGGGTGCAGTGGTAACCGTTTCTCCCTCCTCTGCGTaGATCAGGTCATTTCTGCTC +
Preference number: 4 (lower is better)
Translates to: AVPCSATRAESQGAVVTVSPSSA*IRSFLL
Trigger: GAGCAGAAATGACCTGATCCACGCAGAGGAGGGAGA...AACGGTTACCACTGCACCCTGGGACTCAGCTCGGGTGGCCGAGCACGGCACAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp TGGCGCCAGGACAGTGCTGGGCATCAGGTGCCCGGCCTCAGTGGCAGGAGCCGTTGTCGAAGTTGGTTGTaGGAGTCTCATCCTGGAAGT +
Preference number: 4 (lower is better)
Translates to: WRQDSAGHQVPGLSGRSRCRSWL*ESHPGS
Trigger: ACTTCCAGGATGAGACTCCCACAACCAACTTCGACA...ACGGCTCCTGCCACTGAGGCCGGGCACCTGATGCCCAGCACTGTCCTGGCGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CCCCTCCGTCCCGAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCGGAAGGTGTCGAAGTTaGTTGTGGGAGTCTCATCCT +
Preference number: 4 (lower is better)
Translates to: PLRPEVSAHFQVGPASLCGRCRS*LWESHP
Trigger: AGGATGAGACTCCCACAACCAACTTCGACACCTTCC...GCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTCGGGACGGAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp ACGCCTGCTGCATGCAGGCGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTTCTCCCGTCAGGATCTaGAAGACAGTGAGGATGGCG +
Preference number: 4 (lower is better)
Translates to: TPAACRRLSGHGAASTSGSPVRI*KTVRMA
Trigger: CGCCATCCTCACTGTCTTCCAGATCCTGACGGGAGA...ACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACGCCTGCATGCAGCAGGCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp CCACGTGAAGGGTGCTCCCCACAGGACGCAGAGCTCCTCACAACGGCTCCAAGCTCTCCCGTCAGGATCTaGAAGACAGTGAGGATGGCG +
Preference number: 4 (lower is better)
Translates to: PREGCSPQDAELLTTAPSSPVRI*KTVRMA
Trigger: CGCCATCCTCACTGTCTTCCAGATCCTGACGGGAGA...GCTTGGAGCCGTTGTGAGGAGCTCTGCGTCCTGTGGGGAGCACCCTTCACGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp TGGCGCCAGGACAGTGCTGGGCATCAGGTGCCCGGCCTCAGTGGCAGGAGCCGTGAGCAAGCTTCTGATTaGCTGCTTCTTCCATCTCCT +
Preference number: 4 (lower is better)
Translates to: WRQDSAGHQVPGLSGRSREQASD*LLLPSP
Trigger: AGGAGATGGAAGAAGCAGCCAATCAGAAGCTTGCTC...ACGGCTCCTGCCACTGAGGCCGGGCACCTGATGCCCAGCACTGTCCTGGCGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGCCTGGCGGCGATaGAGATGTTCGCGGCAGACA +
Preference number: 4 (lower is better)
Translates to: EGRLPRVDDKTHPLEHTPAAWRR*RCSRQT
Trigger: TGTCTGCCGCGAACATCTCCATCGCCGCCAGGCAGC...AGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp AGACTGAAAATGCCTCACACAAGCACGTGGTCAGCTGCCCTGTGGCTTCCTTGGTCCTTGCTCGGATCCTaGTGCCGGTGCGCGCGGTGG +
Preference number: 4 (lower is better)
Translates to: RLKMPHTSTWSAALWLPWSLLGS*CRCARW
Trigger: CCACCGCGCGCACCGGCACCAGGATCCGAGCAAGGA...CCAAGGAAGCCACAGGGCAGCTGACCACGTGCTTGTGTGAGGCATTTTCAGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGCTCCAGGTCACAGTGTaGCTCCCGGGGCTGGTGGTT +
Preference number: 4 (lower is better)
Translates to: AGCPVWMIKLIHWNTRLLLQVTV*LPGLVV
Trigger: AACCACCAGCCCCGGGAGCCACACTGTGACCTGGAG...CAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GCTGCATGCAGGCGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTCTTGGTTGGGCAGTGTGTGCATaGGACCCACAGTCACAGTCC +
Preference number: 4 (lower is better)
Translates to: AACRRLSGHGAASTSGLGWAVCA*DPQSQS
Trigger: GGACTGTGACTGTGGGTCCCATGCACACACTGCCCA...ACCAAGACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACGCCTGCATGCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp TCCAGGGAGGACAGAGCTTGCCTGAGTGAGCATTCGCTGACACTGGCGGGCTGCTGGGCAGTGTGTGCATaGGACCCACAGTCACAGTCC +
Preference number: 4 (lower is better)
Translates to: SREDRACLSEHSLTLAGCWAVCA*DPQSQS
Trigger: GGACTGTGACTGTGGGTCCCATGCACACACTGCCCA...GCAGCCCGCCAGTGTCAGCGAATGCTCACTCAGGCAAGCTCTGTCCTCCCTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCCCTTCCACTCGTGGGAGGAGGTCTGGAGACAGGTGCTaGGCAGTGTGTGCATGGGAC +
Preference number: 4 (lower is better)
Translates to: VVSCPVASLETPSTRGRRSGDRC*AVCAWD
Trigger: GTCCCATGCACACACTGCCCAGCACCTGTCTCCAGA...CCTCCTCCCACGAGTGGAAGGGGTTTCCAAGGAAGCCACAGGGCAGCTGACCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp TCCAGGGAGGACAGAGCTTGCCTGAGTGAGCATTCGCTGACACTGGCGGGCTGCTCTGGAGACAGGTGCTaGGCAGTGTGTGCATGGGAC +
Preference number: 4 (lower is better)
Translates to: SREDRACLSEHSLTLAGCSGDRC*AVCAWD
Trigger: GTCCCATGCACACACTGCCCAGCACCTGTCTCCAGA...GCAGCCCGCCAGTGTCAGCGAATGCTCACTCAGGCAAGCTCTGTCCTCCCTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp TCCAGGGAGGACAGAGCTTGCCTGAGTGAGCATTCGCTGACACTGGCGGGCTGCAATAGTGTTCGGGTCTaGGGGCTGACTGCCCATGCG +
Preference number: 4 (lower is better)
Translates to: SREDRACLSEHSLTLAGCNSVRV*GLTAHA
Trigger: CGCATGGGCAGTCAGCCCCCAGACCCGAACACTATT...GCAGCCCGCCAGTGTCAGCGAATGCTCACTCAGGCAAGCTCTGTCCTCCCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GCTTGCCTGAGTGAGCATTCGCTGACACTGGCGGGCTGCACAAGCCACGACTGTGGTCCACGTTACCACTaGGAACGACCGTGGCTTCCC +
Preference number: 4 (lower is better)
Translates to: ACLSEHSLTLAGCTSHDCGPRYH*ERPWLP
Trigger: GGGAAGCCACGGTCGTTCCCAGTGGTAACGTGGACC...ACAGTCGTGGCTTGTGCAGCCCGCCAGTGTCAGCGAATGCTCACTCAGGCAAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCCCTTCCACTCGTGGGAGGAGGAGTGTTTCAGCACCATaGGCCAGCCTTCTCCCGTGG +
Preference number: 4 (lower is better)
Translates to: VVSCPVASLETPSTRGRRSVSAP*ASLLPW
Trigger: CCACGGGAGAAGGCTGGCCCATGGTGCTGAAACACT...CCTCCTCCCACGAGTGGAAGGGGTTTCCAAGGAAGCCACAGGGCAGCTGACCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCCCTTCCACTCGTGGGAGGAGGCACACTCGGTGGCATTaGCCTGCTCATCACAGGCCT +
Preference number: 4 (lower is better)
Translates to: VVSCPVASLETPSTRGRRHTRWH*PAHHRP
Trigger: AGGCCTGTGATGAGCAGGCCAATGCCACCGAGTGTG...CCTCCTCCCACGAGTGGAAGGGGTTTCCAAGGAAGCCACAGGGCAGCTGACCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CCACGTGAAGGGTGCTCCCCACAGGACGCAGAGCTCCTCACAACGGCTCCAAGCCACTTCCACACTCGGTaGCATTGGCCTGCTCATCAC +
Preference number: 4 (lower is better)
Translates to: PREGCSPQDAELLTTAPSHFHTR*HWPAHH
Trigger: GTGATGAGCAGGCCAATGCCACCGAGTGTGGAAGTG...GCTTGGAGCCGTTGTGAGGAGCTCTGCGTCCTGTGGGGAGCACCCTTCACGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGCCACCCGAGCTGAGTCCCAGGGTTGTCCTCGTTGGAGATaGGCATGTTCATGCGAACCA +
Preference number: 4 (lower is better)
Translates to: VRVVVAVPCSATRAESQGCPRWR*ACSCEP
Trigger: TGGTTCGCATGAACATGCCCATCTCCAACGAGGACA...ACCCTGGGACTCAGCTCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp GTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCCCTTCCACTCGTGGGAGGAGGCTGCTTTGTCCCAGCTaGGGCCAGCTTGATCTCCAG +
Preference number: 4 (lower is better)
Translates to: VVSCPVASLETPSTRGRRLLCPS*GQLDLQ
Trigger: CTGGAGATCAAGCTGGCCCCAGCTGGGACAAAGCAG...CCTCCTCCCACGAGTGGAAGGGGTTTCCAAGGAAGCCACAGGGCAGCTGACCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp ACCCGAGCTGAGTCCCAGGGTGCAGTGGTAACCGTTGGGCACGCGGCGGAGAGGATCTCATCAGGCTTATaGGGTGGTACCAGCAAGTCC +
Preference number: 4 (lower is better)
Translates to: TRAESQGAVVTVGHAAERISSGL*GGTSKS
Trigger: GGACTTGCTGGTACCACCCCATAAGCCTGATGAGAT...CCTCTCCGCCGCGTGCCCAACGGTTACCACTGCACCCTGGGACTCAGCTCGGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp GCACCAGTGGTCTTGGTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGCCACCCGAGGAGCCTGCTGCATCTaGTCTCTGGTGGTTTTGTTC +
Preference number: 4 (lower is better)
Translates to: APVVLVRVVVAVPCSATRGACCI*SLVVLF
Trigger: GAACAAAACCACCAGAGACCAGATGCAGCAGGCTCC...TCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGACCAAGACCACTGGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp GAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGACACAGGACCCATCTaGGAGAGGCCTCCAGGAGCC +
Preference number: 4 (lower is better)
Translates to: EGRLPRVDDKTHPLEHTPDTGPI*ERPPGA
Trigger: GGCTCCTGGAGGCCTCTCCCAGATGGGTCCTGTGTC...AGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGGACACAGGACCCATCTaGGAGAGGCCTCCAGGAGCC +
Preference number: 4 (lower is better)
Translates to: AGCPVWMIKLIHWNTRLLDTGPI*ERPPGA
Trigger: GGCTCCTGGAGGCCTCTCCCAGATGGGTCCTGTGTC...CAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CCTGCTGCATGCAGGCGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTCTTGTGTCTGCTCCAGGGTaGCCTTCAGAGGGTGGAACA +
Preference number: 4 (lower is better)
Translates to: PAACRRLSGHGAASTSGLVSAPG*PSEGGT
Trigger: TGTTCCACCCTCTGAAGGCCACCCTGGAGCAGACAC...AAGACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACGCCTGCATGCAGCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp GAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGTTGATGCCACTCTCTTaGTTTTGTATGGCCCCGCCA +
Preference number: 4 (lower is better)
Translates to: EVSAHFQVGPASLCRTATLMPLS*FCMAPP
Trigger: TGGCGGGGCCATACAAAACCAAGAGAGTGGCATCAA...CGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGGGTGGCCTGGCCTCATaGGGTGCATCCTGGGTCCTT +
Preference number: 4 (lower is better)
Translates to: AGCPVWMIKLIHWNTRLLGGLAS*GASWVL
Trigger: AAGGACCCAGGATGCACCCCATGAGGCCAGGCCACC...CAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp TCTTCACCAAACAAGGGACCTCCCAGCATCTTGTGCACCTTGGACAGTGTCCTGGAGGCCGCTCGACCCTaGCTCTCCAGCCCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: SSPNKGPPSILCTLDSVLEAARP*LSSPGW
Trigger: CCAGCCTGGGCTGGAGAGCCAGGGTCGAGCGGCCTC...CAGGACACTGTCCAAGGTGCACAAGATGCTGGGAGGTCCCTTGTTTGGTGAAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGTGGGCGGTCCGGGGTaGTGCTGCAAAGATGAGTCC +
Preference number: 4 (lower is better)
Translates to: EGRLPRVDDKTHPLEHTPVGGPG*CCKDES
Trigger: GGACTCATCTTTGCAGCACCACCCCGGACCGCCCAC...AGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp AGACTGAAAATGCCTCACACAAGCACGTGGTCAGCTGCCCTGTGGCTTCCTTGGTGGCAGCGGTGGTGGTaGTGGTGCGACGACGCCTGG +
Preference number: 4 (lower is better)
Translates to: RLKMPHTSTWSAALWLPWWQRWW*WCDDAW
Trigger: CCAGGCGTCGTCGCACCACCACCACCACCGCTGCCA...CCAAGGAAGCCACAGGGCAGCTGACCACGTGCTTGTGTGAGGCATTTTCAGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGTTGGCGACGTTGGGTaGCTGCTGAGGGAGGGCTTG +
Preference number: 4 (lower is better)
Translates to: EGRLPRVDDKTHPLEHTPVGDVG*LLREGL
Trigger: CAAGCCCTCCCTCAGCAGCCACCCAACGTCGCCAAC...AGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CCCGAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGACACGTAGGAAGTCCTaGAGGAGCGGCCCGAGTTGG +
Preference number: 4 (lower is better)
Translates to: PEGRLPRVDDKTHPLEHTTRRKS*RSGPSW
Trigger: CCAACTCGGGCCGCTCCTCCAGGACTTCCTACGTGT...CGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTTGCAGTGGTAACCGTTaGGCACGCGGCGGAGAGGGT +
Preference number: 4 (lower is better)
Translates to: EGRLPRVDDKTHPLEHTPCSGNR*ARGGEG
Trigger: ACCCTCTCCGCCGCGTGCCCAACGGTTACCACTGCA...AGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GAAAATGCCTCACACAAGCACGTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCGGAGCCTCACCAAGGTaGGCAAGGCCTCCCCCGAGG +
Preference number: 4 (lower is better)
Translates to: ENASHKHVVSCPVASLETGASPR*ARPPPR
Trigger: CCTCGGGGGAGGCCTTGCCCACCTTGGTGAGGCTCC...GGTTTCCAAGGAAGCCACAGGGCAGCTGACCACGTGCTTGTGTGAGGCATTTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGCCCCGGCGAAGTGGATaGGTGAGGAGTTGGCCGTCT +
Preference number: 4 (lower is better)
Translates to: AGCPVWMIKLIHWNTRLLPRRSG*VRSWPS
Trigger: AGACGGCCAACTCCTCACCCATCCACTTCGCCGGGG...CAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CTCGTGGGAGGAGGACAGCAAATGGCTGCCTTGTTTGCCACCATGACATCCAGTACGGCTGAGCCGGCCTaGGGAGAAGGCAGGGAGGCT +
Preference number: 4 (lower is better)
Translates to: LVGGGQQMAALFATMTSSTAEPA*GEGREA
Trigger: AGCCTCCCTGCCTTCTCCCCAGGCCGGCTCAGCCGT...ACTGGATGTCATGGTGGCAAACAAGGCAGCCATTTGCTGTCCTCCTCCCACGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GCCCGGCCTCAGTGGCAGGAGCCGTGTCCTCCCTCGGTCACTTGCTCTGAGTTTCCAGGACACGGGATTTaGACTCCTGGGTCCTTCTCA +
Preference number: 4 (lower is better)
Translates to: ARPQWQEPCPPSVTCSEFPGHGI*TPGSFS
Trigger: TGAGAAGGACCCAGGAGTCCAAATCCCGTGTCCTGG...AAACTCAGAGCAAGTGACCGAGGGAGGACACGGCTCCTGCCACTGAGGCCGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCCCTTCCACTCGTGGGAGGAGGGCCCTGTGGCTTCCTTaGAAACCCCTTCCACTCGTG +
Preference number: 4 (lower is better)
Translates to: VVSCPVASLETPSTRGRRALWLP*KPLPLV
Trigger: CACGAGTGGAAGGGGTTTCCAAGGAAGCCACAGGGC...CCTCCTCCCACGAGTGGAAGGGGTTTCCAAGGAAGCCACAGGGCAGCTGACCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CCACGTGAAGGGTGCTCCCCACAGGACGCAGAGCTCCTCACAACGGCTCCAAGCACACCCAAGATAACATaGGCTGGGGGCTGGGGAACA +
Preference number: 4 (lower is better)
Translates to: PREGCSPQDAELLTTAPSTPKIT*AGGWGT
Trigger: TGTTCCCCAGCCCCCAGCCCATGTTATCTTGGGTGT...GCTTGGAGCCGTTGTGAGGAGCTCTGCGTCCTGTGGGGAGCACCCTTCACGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGCAGCCACTGCTTGACTaGTTCCAGATGCAGACAACT +
Preference number: 4 (lower is better)
Translates to: EVSAHFQVGPASLCRTATQPLLD*FQMQTT
Trigger: AGTTGTCTGCATCTGGAACCAGTCAAGCAGTGGCTG...CGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp CCCGAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGTGGCAAGGATCCCTGTaGGGACGACCACGAAGTCCA +
Preference number: 4 (lower is better)
Translates to: PEGRLPRVDDKTHPLEHTWQGSL*GRPRSP
Trigger: TGGACTTCGTGGTCGTCCTCACAGGGATCCTTGCCA...CGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp CCCGAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGACTCCAGGTACCCGTTaGGCTCTCGCTCGATCTGCT +
Preference number: 4 (lower is better)
Translates to: PEGRLPRVDDKTHPLEHTTPGTR*ALARSA
Trigger: AGCAGATCGAGCGAGAGCTCAACGGGTACCTGGAGT...CGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp CGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGCATGCAGGCGTCTGTCTTCCCGCTCTTaGGGCTGGCGCGGGCGAAGG +
Preference number: 4 (lower is better)
Translates to: RVDDKTHPLEHTPAACRRLSSRS*GWRGRR
Trigger: CCTTCGCCCGCGCCAGCCTCAAGAGCGGGAAGACAG...ACGCCTGCATGCAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GCGGTCACGGTGCAGCTAGCACCAGTGGTCTTGGTCAGGGTGGTGGTAGCTGTGCTTCCTCCGGAAGTATaGCGAGCTCTCTGTCTTCCC +
Preference number: 4 (lower is better)
Translates to: AVTVQLAPVVLVRVVVAVLPPEV*RALCLP
Trigger: GGGAAGACAGAGAGCTCGTCATACTTCCGGAGGAAG...CACAGCTACCACCACCCTGACCAAGACCACTGGTGCTAGCTGCACCGTGACCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR TCA 90 bp CGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTCTTGGTCAGGGTGGTGGTCTTCCTCCGGAAGTATaGCGAGCTCTCTGTCTTCCC +
Preference number: 4 (lower is better)
Translates to: RLSGHGAASTSGLGQGGGLPPEV*RALCLP
Trigger: GGGAAGACAGAGAGCTCGTCATACTTCCGGAGGAAG...ACCACCACCCTGACCAAGACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR TCA 90 bp GCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGGGATCTGGAAGACAGTaGGGATGGCGGCAGGGAAGG +
Preference number: 4 (lower is better)
Translates to: AGCPVWMIKLIHWNTRLLGSGRQ*GWRQGR
Trigger: CCTTCCCTGCCGCCATCCTCACTGTCTTCCAGATCC...CAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GCTTGCCTGAGTGAGCATTCGCTGACACTGGCGGGCTGCACAAGCCACGACTGTCGAGTGACGTTCCGCTaGTTGTCTGCATCCTCTGGC +
Preference number: 4 (lower is better)
Translates to: ACLSEHSLTLAGCTSHDCRVTFR*LSASSG
Trigger: GCCAGAGGATGCAGACAATCAGCGGAACGTCACTCG...ACAGTCGTGGCTTGTGCAGCCCGCCAGTGTCAGCGAATGCTCACTCAGGCAAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GGATTCTCGACCCAACACTGCCTGGGGAAATGGCTGTGGTTCTGCATGGAATGGTTCGGGTCTGGGGGCTaGCTGCCCATGCGAGTGACG +
Preference number: 4 (lower is better)
Translates to: GFSTQHCLGKWLWFCMEWFGSGG*LPMRVT
Trigger: CGTCACTCGCATGGGCAGTCAGCCCCCAGACCCGAA...CCATTCCATGCAGAACCACAGCCATTTCCCCAGGCAGTGTTGGGTCGAGAATCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GAAAATGCCTCACACAAGCACGTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCTTCGGGTCTGGGGGCTaGCTGCCCATGCGAGTGACG +
Preference number: 4 (lower is better)
Translates to: ENASHKHVVSCPVASLETFGSGG*LPMRVT
Trigger: CGTCACTCGCATGGGCAGTCAGCCCCCAGACCCGAA...GGTTTCCAAGGAAGCCACAGGGCAGCTGACCACGTGCTTGTGTGAGGCATTTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GCGGTCACGGTGCAGCTAGCACCAGTGGTCTTGGTCAGGGTGGTGGTAGCTGTGACATGTCATTGTAACTaGTGCGCCCACACGCAGCCG +
Preference number: 4 (lower is better)
Translates to: AVTVQLAPVVLVRVVVAVTCHCN*CAHTQP
Trigger: CGGCTGCGTGTGGGCGCATCAGTTACAATGACATGT...CACAGCTACCACCACCCTGACCAAGACCACTGGTGCTAGCTGCACCGTGACCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR TCA 90 bp TCTTCACCAAACAAGGGACCTCCCAGCATCTTGTGCACCTTGGACAGTGTCCTGCCAGTGCCGTCCGGATaGGGGCCATCAGCGTGGACG +
Preference number: 4 (lower is better)
Translates to: SSPNKGPPSILCTLDSVLPVPSG*GPSAWT
Trigger: CGTCCACGCTGATGGCCCTCATCCGGACGGCACTGG...CAGGACACTGTCCAAGGTGCACAAGATGCTGGGAGGTCCCTTGTTTGGTGAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp CCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGCATGCAGGCCAGCTGGGGCCAGCTTaGTCTCCAGTGCCGTCCGGA +
Preference number: 4 (lower is better)
Translates to: PVWMIKLIHWNTRLLHAGQLGPA*SPVPSG
Trigger: TCCGGACGGCACTGGAGATCAAGCTGGCCCCAGCTG...GCCTGCATGCAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp AGACTGAAAATGCCTCACACAAGCACGTGGTCAGCTGCCCTGTGGCTTCCTTGGCAGCTGGGGCCAGCTTaGTCTCCAGTGCCGTCCGGA +
Preference number: 4 (lower is better)
Translates to: RLKMPHTSTWSAALWLPWQLGPA*SPVPSG
Trigger: TCCGGACGGCACTGGAGATCAAGCTGGCCCCAGCTG...CCAAGGAAGCCACAGGGCAGCTGACCACGTGCTTGTGTGAGGCATTTTCAGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GCTGCATGCAGGCGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTCTTGGTAACTCCGCGTCACACTaGTGCTGCTTTGTCCCAGCT +
Preference number: 4 (lower is better)
Translates to: AACRRLSGHGAASTSGLGNSASH*CCFVPA
Trigger: AGCTGGGACAAAGCAGCATCAGTGTGACGCGGAGTT...ACCAAGACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACGCCTGCATGCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR TCA 90 bp CCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGCATGCAGGCCACAGCCAGTGCTCCTaGCCGCCCCACAGGGATCTC +
Preference number: 4 (lower is better)
Translates to: PVWMIKLIHWNTRLLHAGHSQCS*PPHRDL
Trigger: GAGATCCCTGTGGGGCGGTCAGGAGCACTGGCTGTG...GCCTGCATGCAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GCCCGGCCTCAGTGGCAGGAGCCGTGTCCTCCCTCGGTCACTTGCTCTGAGTTTGTTATGCTCTGCATCTaGACGTCCACAGCCAGTGCT +
Preference number: 4 (lower is better)
Translates to: ARPQWQEPCPPSVTCSEFVMLCI*TSTASA
Trigger: AGCACTGGCTGTGGACGTTCAGATGCAGAGCATAAC...AAACTCAGAGCAAGTGACCGAGGGAGGACACGGCTCCTGCCACTGAGGCCGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GAAAATGCCTCACACAAGCACGTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCACGTTGGGTGGCTGCTaGGGGAGGGCTTGGGCTTCG +
Preference number: 4 (lower is better)
Translates to: ENASHKHVVSCPVASLETTLGGC*GRAWAS
Trigger: CGAAGCCCAAGCCCTCCCTCAGCAGCCACCCAACGT...GGTTTCCAAGGAAGCCACAGGGCAGCTGACCACGTGCTTGTGTGAGGCATTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTCAGCCTCCTCGAAAGTaGGAGTGTCCTCAGGCAGGG +
Preference number: 4 (lower is better)
Translates to: EGRLPRVDDKTHPLEHTPQPPRK*ECPQAG
Trigger: CCCTGCCTGAGGACACTCTCACTTTCGAGGAGGCTG...AGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp CGGTTTAGGGTCTGGTGTGTGGTACGAGACCCAGGAAGGCAGGACAGGAAGGGGCAGAGCTTGCCTGAGTaGGCATTCGCTGACACTGGC +
Preference number: 4 (lower is better)
Translates to: RFRVWCVVRDPGRQDRKGQSLPE*AFADTG
Trigger: GCCAGTGTCAGCGAATGCTCACTCAGGCAAGCTCTG...CCCCTTCCTGTCCTGCCTTCCTGGGTCTCGTACCACACACCAGACCCTAAACCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GGATTCTCGACCCAACACTGCCTGGGGAAATGGCTGTGGTTCTGCATGGAATGGCGGTTCCTGTGGGGCTaGCGGTGTCCAGGGAGGACA +
Preference number: 4 (lower is better)
Translates to: GFSTQHCLGKWLWFCMEWRFLWG*RCPGRT
Trigger: TGTCCTCCCTGGACACCGTCAGCCCCACAGGAACCG...CCATTCCATGCAGAACCACAGCCATTTCCCCAGGCAGTGTTGGGTCGAGAATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp TGGCGCCAGGACAGTGCTGGGCATCAGGTGCCCGGCCTCAGTGGCAGGAGCCGTCACGTGGCAAAAAGCTaGCATCTTTCTTTCACAGGT +
Preference number: 4 (lower is better)
Translates to: WRQDSAGHQVPGLSGRSRHVAKS*HLSFTG
Trigger: ACCTGTGAAAGAAAGATGTCAGCTTTTTGCCACGTG...ACGGCTCCTGCCACTGAGGCCGGGCACCTGATGCCCAGCACTGTCCTGGCGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCCCTTCCACTCGTGGGAGGAGGCTCGGTCACTTGCTCTaGGTTTCATTCCAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: VVSCPVASLETPSTRGRRLGHLL*VSFQLG
Trigger: CCCCAGCTGGAATGAAACTCAGAGCAAGTGACCGAG...CCTCCTCCCACGAGTGGAAGGGGTTTCCAAGGAAGCCACAGGGCAGCTGACCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GCCCGGCCTCAGTGGCAGGAGCCGTGTCCTCCCTCGGTCACTTGCTCTGAGTTTAGGCCTTGTGGAACTTaGCCATGTAGAACTCCAGGC +
Preference number: 4 (lower is better)
Translates to: ARPQWQEPCPPSVTCSEFRPCGT*PCRTPG
Trigger: GCCTGGAGTTCTACATGGGCAAGTTCCACAAGGCCT...AAACTCAGAGCAAGTGACCGAGGGAGGACACGGCTCCTGCCACTGAGGCCGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp CCTGCTGCATGCAGGCGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTCTTGCCAGTTCCAGGTGTTaGCGGCCGCATCGTTTGTAT +
Preference number: 4 (lower is better)
Translates to: PAACRRLSGHGAASTSGLASSRC*RPHRLY
Trigger: ATACAAACGATGCGGCCGGCAACACCTGGAACTGGC...AAGACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACGCCTGCATGCAGCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR GCA 90 bp CCCGAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGAGGGGACTTCTCCTCTaGATTCCTGTCCTCCTCGGC +
Preference number: 4 (lower is better)
Translates to: PEGRLPRVDDKTHPLEHTRGLLL*IPVLLG
Trigger: GCCGAGGAGGACAGGAATGCAGAGGAGAAGTCCCCT...CGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GAAAATGCCTCACACAAGCACGTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCGCCTTGGCCGAGTTCTaGTGCCTGGCGGCGATGGAG +
Preference number: 4 (lower is better)
Translates to: ENASHKHVVSCPVASLETALAEF*CLAAME
Trigger: CTCCATCGCCGCCAGGCAGCAGAACTCGGCCAAGGC...GGTTTCCAAGGAAGCCACAGGGCAGCTGACCACGTGCTTGTGTGAGGCATTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp CGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGCATGCAGGCGTCTGGCCCGCAGGTTCTaGAGCCGTAGCTGGCTGGCC +
Preference number: 4 (lower is better)
Translates to: RVDDKTHPLEHTPAACRRLARRF*SRSWLA
Trigger: GGCCAGCCAGCTACGGCTGCAGAACCTGCGGGCCAG...ACGCCTGCATGCAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp CGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGCATGCAGGCGTCGCCGGCGCACTCCTTaGTCGGATCCTGGTGCCGGT +
Preference number: 4 (lower is better)
Translates to: RVDDKTHPLEHTPAACRRRRRTP*SDPGAG
Trigger: ACCGGCACCAGGATCCGAGCAAGGAGTGCGCCGGCG...ACGCCTGCATGCAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GCTTGCCTGAGTGAGCATTCGCTGACACTGGCGGGCTGCACAAGCCACGACTGTGTGCTGGGCAGTGTGTaGATGGGACCCACAGTCACA +
Preference number: 4 (lower is better)
Translates to: ACLSEHSLTLAGCTSHDCVLGSV*MGPTVT
Trigger: TGTGACTGTGGGTCCCATGCACACACTGCCCAGCAC...ACAGTCGTGGCTTGTGCAGCCCGCCAGTGTCAGCGAATGCTCACTCAGGCAAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp ACGCCTGCTGCATGCAGGCGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTGTTCCGCTGATTGTCTaGATCCTCTGGCTGTTCCTC +
Preference number: 4 (lower is better)
Translates to: TPAACRRLSGHGAASTSGVPLIV*ILWLFL
Trigger: GAGGAACAGCCAGAGGATGCAGACAATCAGCGGAAC...ACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACGCCTGCATGCAGCAGGCGT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR GCA 90 bp CCCCTCCGTCCCGAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCTTCCCTTTGAAGAGCTaGACCGCAATGACGGCAAAT +
Preference number: 4 (lower is better)
Translates to: PLRPEVSAHFQVGPASLCFPLKS*TAMTAN
Trigger: ATTTGCCGTCATTGCGGTGCAGCTCTTCAAAGGGAA...GCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTCGGGACGGAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GCTGCATGCAGGCGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTCTTGGTCCAAATACTGACCCCTaGAGTCCCTCTCCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: AACRRLSGHGAASTSGLGPNTDP*SPSPAP
Trigger: AGGAGCTGGAGAGGGACTGCAGGGGTCAGTATTTGG...ACCAAGACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACGCCTGCATGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR GCA 90 bp CCTGCTGCATGCAGGCGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTCTTCCAAATACTGACCCCTaGAGTCCCTCTCCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: PAACRRLSGHGAASTSGLPNTDP*SPSPAP
Trigger: AGGAGCTGGAGAGGGACTGCAGGGGTCAGTATTTGG...AAGACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACGCCTGCATGCAGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR GCA 90 bp CACAGGAGCCTCACCAAGGTGGGCAAGGCCTCCCCCGAGGGCCGGCTGCCCCGTCTCGTACTCATAGGGTaGATCATAGAACTTCATCAT +
Preference number: 4 (lower is better)
Translates to: HRSLTKVGKASPEGRLPRLVLIG*IIELHH
Trigger: ATGATGAAGTTCTATGATGCACCCTATGAGTACGAG...ACGGGGCAGCCGGCCCTCGGGGGAGGCCTTGCCCACCTTGGTGAGGCTCCTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTAGGCCTCCAGGAGCCTaGTGCATCTGGTCTCTGGTG +
Preference number: 4 (lower is better)
Translates to: EGRLPRVDDKTHPLEHTPRPPGA*CIWSLV
Trigger: CACCAGAGACCAGATGCAGCAGGCTCCTGGAGGCCT...AGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GCTAGGCTGTGTGGGTTTAGAAAAGTGGATTCTCGACCCAACACTGCCTGGGGACGGTGGTGGTGGTGGTaGGACGACGCCTGGCTAGGG +
Preference number: 4 (lower is better)
Translates to: ARLCGFRKVDSRPNTAWGRWWWW*DDAWLG
Trigger: CCCTAGCCAGGCGTCGTCGCACCACCACCACCACCG...TCCCCAGGCAGTGTTGGGTCGAGAATCCACTTTTCTAAACCCACACAGCCTAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp AGACTGAAAATGCCTCACACAAGCACGTGGTCAGCTGCCCTGTGGCTTCCTTGGTCTGCTTCCTGTCCCTaGGGCGGTGGCAGCGGTGGT +
Preference number: 4 (lower is better)
Translates to: RLKMPHTSTWSAALWLPWSASCP*GGGSGG
Trigger: ACCACCGCTGCCACCGCCGCAGGGACAGGAAGCAGA...CCAAGGAAGCCACAGGGCAGCTGACCACGTGCTTGTGTGAGGCATTTTCAGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCCCTTCCACTCGTGGGAGGAGGCACAGCACTGCTTGGTaGGCCATCCATATCGGCAGA +
Preference number: 4 (lower is better)
Translates to: VVSCPVASLETPSTRGRRHSTAW*AIHIGR
Trigger: TCTGCCGATATGGATGGCGCACCAAGCAGTGCTGTG...CCTCCTCCCACGAGTGGAAGGGGTTTCCAAGGAAGCCACAGGGCAGCTGACCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp TCCAGGGAGGACAGAGCTTGCCTGAGTGAGCATTCGCTGACACTGGCGGGCTGCCACAGCACTGCTTGGTaGGCCATCCATATCGGCAGA +
Preference number: 4 (lower is better)
Translates to: SREDRACLSEHSLTLAGCHSTAW*AIHIGR
Trigger: TCTGCCGATATGGATGGCGCACCAAGCAGTGCTGTG...GCAGCCCGCCAGTGTCAGCGAATGCTCACTCAGGCAAGCTCTGTCCTCCCTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp CCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGCATGCAGGCGTGGTAGCTGTGCCGTaGTCGGCCACCCGAGCTGAG +
Preference number: 4 (lower is better)
Translates to: PVWMIKLIHWNTRLLHAGVVAVP*SATRAE
Trigger: CTCAGCTCGGGTGGCCGAGCACGGCACAGCTACCAC...GCCTGCATGCAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp AGACTGAAAATGCCTCACACAAGCACGTGGTCAGCTGCCCTGTGGCTTCCTTGGCGGCCACGTGAAGGGTaGTCCCCACAGGACGCAGAG +
Preference number: 4 (lower is better)
Translates to: RLKMPHTSTWSAALWLPWRPREG*SPQDAE
Trigger: CTCTGCGTCCTGTGGGGAGCACCCTTCACGTGGCCG...CCAAGGAAGCCACAGGGCAGCTGACCACGTGCTTGTGTGAGGCATTTTCAGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCCCTTCCACTCGTGGGAGGAGGAAGCACGTGGTCAGCTaGCCTGTGGCTTCCTTGGAA +
Preference number: 4 (lower is better)
Translates to: VVSCPVASLETPSTRGRRKHVVS*PVASLE
Trigger: TTCCAAGGAAGCCACAGGGCAGCTGACCACGTGCTT...CCTCCTCCCACGAGTGGAAGGGGTTTCCAAGGAAGCCACAGGGCAGCTGACCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp CACAGGAGCCTCACCAAGGTGGGCAAGGCCTCCCCCGAGGGCCGGCTGCCCCGTATCAACTGCTCTAAATaGTCCCTTTCTTCACCAAAC +
Preference number: 4 (lower is better)
Translates to: HRSLTKVGKASPEGRLPRINCSK*SLSSPN
Trigger: GTTTGGTGAAGAAAGGGAGCATTTAGAGCAGTTGAT...ACGGGGCAGCCGGCCCTCGGGGGAGGCCTTGCCCACCTTGGTGAGGCTCCTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCCCTTCCACTCGTGGGAGGAGGTTCTCGACCCAACACTaGCTGGGGAAATGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: VVSCPVASLETPSTRGRRFSTQH*LGKWLW
Trigger: CCACAGCCATTTCCCCAGGCAGTGTTGGGTCGAGAA...CCTCCTCCCACGAGTGGAAGGGGTTTCCAAGGAAGCCACAGGGCAGCTGACCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp AGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGTGATCATATACTCGAATaGAGGCCACTCGGTGATGCG +
Preference number: 4 (lower is better)
Translates to: RSRRTFRWALLLCAARPRDHILE*RPLGDA
Trigger: CGCATCACCGAGTGGCCTCCATTCGAGTATATGATC...ACGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGGCCAAAGTTGGGTCCTaGCCAGTACTCCCGGCACTC +
Preference number: 4 (lower is better)
Translates to: AGCPVWMIKLIHWNTRLLAKVGS*PVLPAL
Trigger: GAGTGCCGGGAGTACTGGCCAGGACCCAACTTTGGC...CAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GCTGTGCCGTGCTCGGCCACCCGAGCTGAGTCCCAGGGTGCAGTGGTAACCGTTCATTTCTGCTCTTCTTaGTGGCCGCTCTCTTCAGCA +
Preference number: 4 (lower is better)
Translates to: AVPCSATRAESQGAVVTVHFCSS*WPLSSA
Trigger: TGCTGAAGAGAGCGGCCACCAAGAAGAGCAGAAATG...AACGGTTACCACTGCACCCTGGGACTCAGCTCGGGTGGCCGAGCACGGCACAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp GCCCGGCCTCAGTGGCAGGAGCCGTGTCCTCCCTCGGTCACTTGCTCTGAGTTTTCTCCCTCCTCTGCGTaGATCAGGTCATTTCTGCTC +
Preference number: 4 (lower is better)
Translates to: ARPQWQEPCPPSVTCSEFSPSSA*IRSFLL
Trigger: GAGCAGAAATGACCTGATCCACGCAGAGGAGGGAGA...AAACTCAGAGCAAGTGACCGAGGGAGGACACGGCTCCTGCCACTGAGGCCGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CCACGTGAAGGGTGCTCCCCACAGGACGCAGAGCTCCTCACAACGGCTCCAAGCTCTCCCTCCTCTGCGTaGATCAGGTCATTTCTGCTC +
Preference number: 4 (lower is better)
Translates to: PREGCSPQDAELLTTAPSSPSSA*IRSFLL
Trigger: GAGCAGAAATGACCTGATCCACGCAGAGGAGGGAGA...GCTTGGAGCCGTTGTGAGGAGCTCTGCGTCCTGTGGGGAGCACCCTTCACGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp ACCCGAGCTGAGTCCCAGGGTGCAGTGGTAACCGTTGGGCACGCGGCGGAGAGGGGTTGTAATGCACCATaGCCACACACAGTGTGTTCA +
Preference number: 4 (lower is better)
Translates to: TRAESQGAVVTVGHAAERGCNAP*PHTVCS
Trigger: TGAACACACTGTGTGTGGCCATGGTGCATTACAACC...CCTCTCCGCCGCGTGCCCAACGGTTACCACTGCACCCTGGGACTCAGCTCGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp GAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGGGTTGTAATGCACCATaGCCACACACAGTGTGTTCA +
Preference number: 4 (lower is better)
Translates to: EVSAHFQVGPASLCRTATGCNAP*PHTVCS
Trigger: TGAACACACTGTGTGTGGCCATGGTGCATTACAACC...CGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CCCCTCCGTCCCGAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCGGTTGTAATGCACCATaGCCACACACAGTGTGTTCA +
Preference number: 4 (lower is better)
Translates to: PLRPEVSAHFQVGPASLCGCNAP*PHTVCS
Trigger: TGAACACACTGTGTGTGGCCATGGTGCATTACAACC...GCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTCGGGACGGAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GCGGTCACGGTGCAGCTAGCACCAGTGGTCTTGGTCAGGGTGGTGGTAGCTGTGACCGGAAGTAGCTTCTaGGCCCCAGGCCATACATCT +
Preference number: 4 (lower is better)
Translates to: AVTVQLAPVVLVRVVVAVTGSSF*APGHTS
Trigger: AGATGTATGGCCTGGGGCCCAGAAGCTACTTCCGGT...CACAGCTACCACCACCCTGACCAAGACCACTGGTGCTAGCTGCACCGTGACCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp GCTGTGCCGTGCTCGGCCACCCGAGCTGAGTCCCAGGGTGCAGTGGTAACCGTTGGAAGGTGTCGAAGTTaGTTGTGGGAGTCTCATCCT +
Preference number: 4 (lower is better)
Translates to: AVPCSATRAESQGAVVTVGRCRS*LWESHP
Trigger: AGGATGAGACTCCCACAACCAACTTCGACACCTTCC...AACGGTTACCACTGCACCCTGGGACTCAGCTCGGGTGGCCGAGCACGGCACAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp GCTGAGTCCCAGGGTGCAGTGGTAACCGTTGGGCACGCGGCGGAGAGGGTGAGAGGAAGGTGTCGAAGTTaGTTGTGGGAGTCTCATCCT +
Preference number: 4 (lower is better)
Translates to: AESQGAVVTVGHAAERVRGRCRS*LWESHP
Trigger: AGGATGAGACTCCCACAACCAACTTCGACACCTTCC...TCTCACCCTCTCCGCCGCGTGCCCAACGGTTACCACTGCACCCTGGGACTCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp CCACGTGAAGGGTGCTCCCCACAGGACGCAGAGCTCCTCACAACGGCTCCAAGCTCTCCTCTTCATCCTTaGTCAGCTCTTGGGCGTTGG +
Preference number: 4 (lower is better)
Translates to: PREGCSPQDAELLTTAPSSPLHP*SALGRW
Trigger: CCAACGCCCAAGAGCTGACCAAGGATGAAGAGGAGA...GCTTGGAGCCGTTGTGAGGAGCTCTGCGTCCTGTGGGGAGCACCCTTCACGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CTCGTGGGAGGAGGACAGCAAATGGCTGCCTTGTTTGCCACCATGACATCCAGTACACCGAGCGCGCCTTaGCCGAGTTCTGCTGCCTGG +
Preference number: 4 (lower is better)
Translates to: LVGGGQQMAALFATMTSSTPSAP*PSSAAW
Trigger: CCAGGCAGCAGAACTCGGCCAAGGCGCGCTCGGTGT...ACTGGATGTCATGGTGGCAAACAAGGCAGCCATTTGCTGTCCTCCTCCCACGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCCCTTCCACTCGTGGGAGGAGGCAGTCACAGTCCCACTaGTCTCCAGGTCACAGTGTG +
Preference number: 4 (lower is better)
Translates to: VVSCPVASLETPSTRGRRQSQSH*SPGHSV
Trigger: CACACTGTGACCTGGAGACCAGTGGGACTGTGACTG...CCTCCTCCCACGAGTGGAAGGGGTTTCCAAGGAAGCCACAGGGCAGCTGACCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CCCGAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGTCTGGAGACAGGTGCTaGGCAGTGTGTGCATGGGAC +
Preference number: 4 (lower is better)
Translates to: PEGRLPRVDDKTHPLEHTSGDRC*AVCAWD
Trigger: GTCCCATGCACACACTGCCCAGCACCTGTCTCCAGA...CGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CCTGCTGCATGCAGGCGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTCTTTGTTCCTCCACCTTCTaGAGACAGGTGCTGGGCAGT +
Preference number: 4 (lower is better)
Translates to: PAACRRLSGHGAASTSGLCSSTF*RQVLGS
Trigger: ACTGCCCAGCACCTGTCTCCAGAAGGTGGAGGAACA...AAGACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACGCCTGCATGCAGCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp TCCAGGGAGGACAGAGCTTGCCTGAGTGAGCATTCGCTGACACTGGCGGGCTGCTGTTCCTCCACCTTCTaGAGACAGGTGCTGGGCAGT +
Preference number: 4 (lower is better)
Translates to: SREDRACLSEHSLTLAGCCSSTF*RQVLGS
Trigger: ACTGCCCAGCACCTGTCTCCAGAAGGTGGAGGAACA...GCAGCCCGCCAGTGTCAGCGAATGCTCACTCAGGCAAGCTCTGTCCTCCCTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CCCGAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGAATAGTGTTCGGGTCTaGGGGCTGACTGCCCATGCG +
Preference number: 4 (lower is better)
Translates to: PEGRLPRVDDKTHPLEHTNSVRV*GLTAHA
Trigger: CGCATGGGCAGTCAGCCCCCAGACCCGAACACTATT...CGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGCATGCAGGCCACTGGGAACGACCGTaGCTTCCCCAAGAGGGCCCG +
Preference number: 4 (lower is better)
Translates to: PVWMIKLIHWNTRLLHAGHWERP*LPQEGP
Trigger: CGGGCCCTCTTGGGGAAGCCACGGTCGTTCCCAGTG...GCCTGCATGCAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGGTCCACGTTACCACTaGGAACGACCGTGGCTTCCC +
Preference number: 4 (lower is better)
Translates to: EGRLPRVDDKTHPLEHTPGPRYH*ERPWLP
Trigger: GGGAAGCCACGGTCGTTCCCAGTGGTAACGTGGACC...AGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp TCCAGGGAGGACAGAGCTTGCCTGAGTGAGCATTCGCTGACACTGGCGGGCTGCGGCGGAGCAGGTTGGTaGGGCTTAAACAGAACATGG +
Preference number: 4 (lower is better)
Translates to: SREDRACLSEHSLTLAGCGGAGW*GLNRTW
Trigger: CCATGTTCTGTTTAAGCCCCACCAACCTGCTCCGCC...GCAGCCCGCCAGTGTCAGCGAATGCTCACTCAGGCAAGCTCTGTCCTCCCTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GGATTCTCGACCCAACACTGCCTGGGGAAATGGCTGTGGTTCTGCATGGAATGGCGAGTCTGTGCGCACTaGGTCCTCAGCAGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: GFSTQHCLGKWLWFCMEWRVCAH*VLSSQG
Trigger: GCCCTGGCTGCTGAGGACCCAGTGCGCACAGACTCG...CCATTCCATGCAGAACCACAGCCATTTCCCCAGGCAGTGTTGGGTCGAGAATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CCCGAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGTCAGAGCGTTGTTCCTaGGCGAGTCTGTGCGCACTG +
Preference number: 4 (lower is better)
Translates to: PEGRLPRVDDKTHPLEHTSERCS*ASLCAL
Trigger: CAGTGCGCACAGACTCGCCCAGGAACAACGCTCTGA...CGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GCACCAGTGGTCTTGGTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGCCACCCGACCCTCTCCAGCTCCTTaGATTCATCTGTGCAGTAGA +
Preference number: 4 (lower is better)
Translates to: APVVLVRVVVAVPCSATRPSPAP*IHLCSR
Trigger: TCTACTGCACAGATGAATCCAAGGAGCTGGAGAGGG...TCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGACCAAGACCACTGGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp AGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGTCCCTCTCCAGCTCCTTaGATTCATCTGTGCAGTAGA +
Preference number: 4 (lower is better)
Translates to: RSRRTFRWALLLCAARPRPSPAP*IHLCSR
Trigger: TCTACTGCACAGATGAATCCAAGGAGCTGGAGAGGG...ACGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CCCGAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGAGTGTTTCAGCACCATaGGCCAGCCTTCTCCCGTGG +
Preference number: 4 (lower is better)
Translates to: PEGRLPRVDDKTHPLEHTSVSAP*ASLLPW
Trigger: CCACGGGAGAAGGCTGGCCCATGGTGCTGAAACACT...CGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCGGTACCCAGGGCTTaGACCCTGCTCCTCATAGGT +
Preference number: 4 (lower is better)
Translates to: EGRLPRVDDKTHPLEHTPAVPRA*TLLLIG
Trigger: ACCTATGAGGAGCAGGGTCCAAGCCCTGGGTACCGC...AGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp ACGCCTGCTGCATGCAGGCGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTGTCCGGAAGTTGTTGTaGCGGTTGATGCTGGTGTCA +
Preference number: 4 (lower is better)
Translates to: TPAACRRLSGHGAASTSGVRKLL*RLMLVS
Trigger: TGACACCAGCATCAACCGCCACAACAACTTCCGGAC...ACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACGCCTGCATGCAGCAGGCGT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp CCCGAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGTGCTCATCACAGGCCTaGTTGCTCAGGCAGGACAGC +
Preference number: 4 (lower is better)
Translates to: PEGRLPRVDDKTHPLEHTCSSQA*LLRQDS
Trigger: GCTGTCCTGCCTGAGCAACCAGGCCTGTGATGAGCA...CGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GCTTGCCTGAGTGAGCATTCGCTGACACTGGCGGGCTGCACAAGCCACGACTGTTGCTCATCACAGGCCTaGTTGCTCAGGCAGGACAGC +
Preference number: 4 (lower is better)
Translates to: ACLSEHSLTLAGCTSHDCCSSQA*LLRQDS
Trigger: GCTGTCCTGCCTGAGCAACCAGGCCTGTGATGAGCA...ACAGTCGTGGCTTGTGCAGCCCGCCAGTGTCAGCGAATGCTCACTCAGGCAAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CGGTTTAGGGTCTGGTGTGTGGTACGAGACCCAGGAAGGCAGGACAGGAAGGGGTGCTCATCACAGGCCTaGTTGCTCAGGCAGGACAGC +
Preference number: 4 (lower is better)
Translates to: RFRVWCVVRDPGRQDRKGCSSQA*LLRQDS
Trigger: GCTGTCCTGCCTGAGCAACCAGGCCTGTGATGAGCA...CCCCTTCCTGTCCTGCCTTCCTGGGTCTCGTACCACACACCAGACCCTAAACCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp TCCAGGGAGGACAGAGCTTGCCTGAGTGAGCATTCGCTGACACTGGCGGGCTGCCACTTCCACACTCGGTaGCATTGGCCTGCTCATCAC +
Preference number: 4 (lower is better)
Translates to: SREDRACLSEHSLTLAGCHFHTR*HWPAHH
Trigger: GTGATGAGCAGGCCAATGCCACCGAGTGTGGAAGTG...GCAGCCCGCCAGTGTCAGCGAATGCTCACTCAGGCAAGCTCTGTCCTCCCTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GTCTTGGTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGCCACCCGAGCTGAGTCCTCTTCTGGGGCAGATTaGCCCACACAACGGAAATCT +
Preference number: 4 (lower is better)
Translates to: VLVRVVVAVPCSATRAESSSGAD*PTQRKS
Trigger: AGATTTCCGTTGTGTGGGCCAATCTGCCCCAGAAGA...GGACTCAGCTCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGACCAAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp AGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGTTCTTCTGGGGCAGATTaGCCCACACAACGGAAATCT +
Preference number: 4 (lower is better)
Translates to: RSRRTFRWALLLCAARPRSSGAD*PTQRKS
Trigger: AGATTTCCGTTGTGTGGGCCAATCTGCCCCAGAAGA...ACGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGATCAGGCTTATGGGGTaGTACCAGCAAGTCCAAAGT +
Preference number: 4 (lower is better)
Translates to: EVSAHFQVGPASLCRTATIRLMG*YQQVQS
Trigger: ACTTTGGACTTGCTGGTACCACCCCATAAGCCTGAT...CGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GCCCGGCCTCAGTGGCAGGAGCCGTGTCCTCCCTCGGTCACTTGCTCTGAGTTTGGAGCCTGCTGCATCTaGTCTCTGGTGGTTTTGTTC +
Preference number: 4 (lower is better)
Translates to: ARPQWQEPCPPSVTCSEFGACCI*SLVVLF
Trigger: GAACAAAACCACCAGAGACCAGATGCAGCAGGCTCC...AAACTCAGAGCAAGTGACCGAGGGAGGACACGGCTCCTGCCACTGAGGCCGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGCATGCAGGCGCCGCTGGGCCAGCGTaGAGATGGAGCGCTTCATGG +
Preference number: 4 (lower is better)
Translates to: PVWMIKLIHWNTRLLHAGAAGPA*RWSASW
Trigger: CCATGAAGCGCTCCATCTCCACGCTGGCCCAGCGGC...GCCTGCATGCAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GGATTCTCGACCCAACACTGCCTGGGGAAATGGCTGTGGTTCTGCATGGAATGGGCCGCTGGGCCAGCGTaGAGATGGAGCGCTTCATGG +
Preference number: 4 (lower is better)
Translates to: GFSTQHCLGKWLWFCMEWAAGPA*RWSASW
Trigger: CCATGAAGCGCTCCATCTCCACGCTGGCCCAGCGGC...CCATTCCATGCAGAACCACAGCCATTTCCCCAGGCAGTGTTGGGTCGAGAATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp TCTTCACCAAACAAGGGACCTCCCAGCATCTTGTGCACCTTGGACAGTGTCCTGTGGCAGCGGTGGTGGTaGTGGTGCGACGACGCCTGG +
Preference number: 4 (lower is better)
Translates to: SSPNKGPPSILCTLDSVLWQRWW*WCDDAW
Trigger: CCAGGCGTCGTCGCACCACCACCACCACCGCTGCCA...CAGGACACTGTCCAAGGTGCACAAGATGCTGGGAGGTCCCTTGTTTGGTGAAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTACACGTAGGAAGTCCTaGAGGAGCGGCCCGAGTTGG +
Preference number: 4 (lower is better)
Translates to: EGRLPRVDDKTHPLEHTPTRRKS*RSGPSW
Trigger: CCAACTCGGGCCGCTCCTCCAGGACTTCCTACGTGT...AGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGACACGTAGGAAGTCCTaGAGGAGCGGCCCGAGTTGG +
Preference number: 4 (lower is better)
Translates to: AGCPVWMIKLIHWNTRLLTRRKS*RSGPSW
Trigger: CCAACTCGGGCCGCTCCTCCAGGACTTCCTACGTGT...CAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCCCTTCCACTCGTGGGAGGAGGGCCGGCTGCCCCGTGTaGATGATAAAACTCATCCAC +
Preference number: 4 (lower is better)
Translates to: VVSCPVASLETPSTRGRRAGCPV*MIKLIH
Trigger: GTGGATGAGTTTTATCATCCACACGGGGCAGCCGGC...CCTCCTCCCACGAGTGGAAGGGGTTTCCAAGGAAGCCACAGGGCAGCTGACCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GCTAGGCTGTGTGGGTTTAGAAAAGTGGATTCTCGACCCAACACTGCCTGGGGAGGAGCCTCACCAAGGTaGGCAAGGCCTCCCCCGAGG +
Preference number: 4 (lower is better)
Translates to: ARLCGFRKVDSRPNTAWGGASPR*ARPPPR
Trigger: CCTCGGGGGAGGCCTTGCCCACCTTGGTGAGGCTCC...TCCCCAGGCAGTGTTGGGTCGAGAATCCACTTTTCTAAACCCACACAGCCTAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GCTAGGCTGTGTGGGTTTAGAAAAGTGGATTCTCGACCCAACACTGCCTGGGGAGGAACCACTGCCCTGTaGGTGGGGTCCCGGCTCCTG +
Preference number: 4 (lower is better)
Translates to: ARLCGFRKVDSRPNTAWGGTTAL*VGSRLL
Trigger: CAGGAGCCGGGACCCCACCCACAGGGCAGTGGTTCC...TCCCCAGGCAGTGTTGGGTCGAGAATCCACTTTTCTAAACCCACACAGCCTAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GCTTGCCTGAGTGAGCATTCGCTGACACTGGCGGGCTGCACAAGCCACGACTGTTGGCGGTCAGGCACTTaGTCAAGAGCAGCAGAGCCA +
Preference number: 4 (lower is better)
Translates to: ACLSEHSLTLAGCTSHDCWRSGT*SRAAEP
Trigger: TGGCTCTGCTGCTCTTGACCAAGTGCCTGACCGCCA...ACAGTCGTGGCTTGTGCAGCCCGCCAGTGTCAGCGAATGCTCACTCAGGCAAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CCCGAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGTCCAGTGCTCTCCACTaGCAAGGGCTTGCTACCTGG +
Preference number: 4 (lower is better)
Translates to: PEGRLPRVDDKTHPLEHTSSALH*QGLATW
Trigger: CCAGGTAGCAAGCCCTTGCCAGTGGAGAGCACTGGA...CGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GCCCGGCCTCAGTGGCAGGAGCCGTGTCCTCCCTCGGTCACTTGCTCTGAGTTTGAGGAGGACAGCAAATaGCTGCCTTGTTTGCCACCA +
Preference number: 4 (lower is better)
Translates to: ARPQWQEPCPPSVTCSEFEEDSK*LPCLPP
Trigger: TGGTGGCAAACAAGGCAGCCATTTGCTGTCCTCCTC...AAACTCAGAGCAAGTGACCGAGGGAGGACACGGCTCCTGCCACTGAGGCCGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCCCTTCCACTCGTGGGAGGAGGTGGTCAGCTGCCCTGTaGCTTCCTTGGAAACCCCTT +
Preference number: 4 (lower is better)
Translates to: VVSCPVASLETPSTRGRRWSAAL*LPWKPL
Trigger: AAGGGGTTTCCAAGGAAGCCACAGGGCAGCTGACCA...CCTCCTCCCACGAGTGGAAGGGGTTTCCAAGGAAGCCACAGGGCAGCTGACCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CACAGGAGCCTCACCAAGGTGGGCAAGGCCTCCCCCGAGGGCCGGCTGCCCCGTCTCTTCTGCTGTATGTaGAAGGAAACCTATTTCACA +
Preference number: 4 (lower is better)
Translates to: HRSLTKVGKASPEGRLPRLFCCM*KETYFT
Trigger: TGTGAAATAGGTTTCCTTCCACATACAGCAGAAGAG...ACGGGGCAGCCGGCCCTCGGGGGAGGCCTTGCCCACCTTGGTGAGGCTCCTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CCCCTCCGTCCCGAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCTGGTTCTGCATGGAATaGACACATTCGACACCCAAG +
Preference number: 4 (lower is better)
Translates to: PLRPEVSAHFQVGPASLCWFCME*THSTPK
Trigger: CTTGGGTGTCGAATGTGTCCATTCCATGCAGAACCA...GCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTCGGGACGGAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GCCCGGCCTCAGTGGCAGGAGCCGTGTCCTCCCTCGGTCACTTGCTCTGAGTTTCACTGCCTGGGGAAATaGCTGTGGTTCTGCATGGAA +
Preference number: 4 (lower is better)
Translates to: ARPQWQEPCPPSVTCSEFHCLGK*LWFCME
Trigger: TTCCATGCAGAACCACAGCCATTTCCCCAGGCAGTG...AAACTCAGAGCAAGTGACCGAGGGAGGACACGGCTCCTGCCACTGAGGCCGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCCCTTCCACTCGTGGGAGGAGGCGACCCAACACTGCCTaGGGAAATGGCTGTGGTTCT +
Preference number: 4 (lower is better)
Translates to: VVSCPVASLETPSTRGRRRPNTA*GNGCGS
Trigger: AGAACCACAGCCATTTCCCCAGGCAGTGTTGGGTCG...CCTCCTCCCACGAGTGGAAGGGGTTTCCAAGGAAGCCACAGGGCAGCTGACCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR CAA 72 bp TCACACAAGCACGTGGTCAGCTGCCCTGTGGCTTCCTaGGAAACCCCTTCCACTCGTGGGAGGAGGACAGCA +
Preference number: 4 (lower is better)
Translates to: SHKHVVSCPVAS*ETPSTRGRRTA
Trigger: TGCTGTCCTCCTCCCACGAGTGGAAGGGGTTTCCAAGGAAGCCACAGGGCAGCTGACCACGTGCTTGTGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTTGGCAAGGATCCCTGTaGGGACGACCACGAAGTCCA +
Preference number: 4 (lower is better)
Translates to: EGRLPRVDDKTHPLEHTPWQGSL*GRPRSP
Trigger: TGGACTTCGTGGTCGTCCTCACAGGGATCCTTGCCA...AGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp CCCCTCCGTCCCGAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCTATTGTCAAAGTTGGTaGTGCCAAAGTTGGGTCCTG +
Preference number: 4 (lower is better)
Translates to: PLRPEVSAHFQVGPASLCYCQSW*CQSWVL
Trigger: CAGGACCCAACTTTGGCATCACCAACTTTGACAATA...GCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTCGGGACGGAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp CGGTTTAGGGTCTGGTGTGTGGTACGAGACCCAGGAAGGCAGGACAGGAAGGGGCTTCCTCCGGAAGTATaGCGAGCTCTCTGTCTTCCC +
Preference number: 4 (lower is better)
Translates to: RFRVWCVVRDPGRQDRKGLPPEV*RALCLP
Trigger: GGGAAGACAGAGAGCTCGTCATACTTCCGGAGGAAG...CCCCTTCCTGTCCTGCCTTCCTGGGTCTCGTACCACACACCAGACCCTAAACCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp CCCGAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCTTCCTCCGGAAGTATaGCGAGCTCTCTGTCTTCCC +
Preference number: 4 (lower is better)
Translates to: PEGRLPRVDDKTHPLEHTLPPEV*RALCLP
Trigger: GGGAAGACAGAGAGCTCGTCATACTTCCGGAGGAAG...CGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp CCTGCTGCATGCAGGCGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTCTTCAAAGTCGAAGCAGTTaGAGGAGGACCGGAAGTAGC +
Preference number: 4 (lower is better)
Translates to: PAACRRLSGHGAASTSGLQSRSS*RRTGSS
Trigger: GCTACTTCCGGTCCTCCTTCAACTGCTTCGACTTTG...AAGACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACGCCTGCATGCAGCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR TCA 90 bp GCTGCATGCAGGCGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTCTTGGTCAAAGTCGAAGCAGTTaGAGGAGGACCGGAAGTAGC +
Preference number: 4 (lower is better)
Translates to: AACRRLSGHGAASTSGLGQSRSS*RRTGSS
Trigger: GCTACTTCCGGTCCTCCTTCAACTGCTTCGACTTTG...ACCAAGACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACGCCTGCATGCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR TCA 90 bp GAAAATGCCTCACACAAGCACGTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCAGGAGCTTCCCGGCTTaGTGGCCGCCCAGACCACTT +
Preference number: 4 (lower is better)
Translates to: ENASHKHVVSCPVASLETRSFPA*WPPRPL
Trigger: AAGTGGTCTGGGCGGCCATCAAGCCGGGAAGCTCCT...GGTTTCCAAGGAAGCCACAGGGCAGCTGACCACGTGCTTGTGTGAGGCATTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GCCCGGCCTCAGTGGCAGGAGCCGTGTCCTCCCTCGGTCACTTGCTCTGAGTTTTGCGATTCGATCCCGTaGTACATCACTGCATTCCAG +
Preference number: 4 (lower is better)
Translates to: ARPQWQEPCPPSVTCSEFCDSIP*YITAFQ
Trigger: CTGGAATGCAGTGATGTATCACGGGATCGAATCGCA...AAACTCAGAGCAAGTGACCGAGGGAGGACACGGCTCCTGCCACTGAGGCCGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GAAAATGCCTCACACAAGCACGTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCTTCTCCACAGCCTCGTaGGCAGGCTGCGCCTTGTGC +
Preference number: 4 (lower is better)
Translates to: ENASHKHVVSCPVASLETFSTAS*AGCALC
Trigger: GCACAAGGCGCAGCCTGCTCACGAGGCTGTGGAGAA...GGTTTCCAAGGAAGCCACAGGGCAGCTGACCACGTGCTTGTGTGAGGCATTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp CCCCTCCGTCCCGAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCTGGAGAACATGGATGTaGACACGATGTTCAGGCATT +
Preference number: 4 (lower is better)
Translates to: PLRPEVSAHFQVGPASLCWRTWM*TRCSGI
Trigger: AATGCCTGAACATCGTGTTCACATCCATGTTCTCCA...GCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTCGGGACGGAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp CCCGAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGGCACCCCAAAGGCGATaGTCTTCAGCACGCATTCCA +
Preference number: 4 (lower is better)
Translates to: PEGRLPRVDDKTHPLEHTAPQRR*SSARIP
Trigger: TGGAATGCGTGCTGAAGATCATCGCCTTTGGGGTGC...CGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GCTGTGCCGTGCTCGGCCACCCGAGCTGAGTCCCAGGGTGCAGTGGTAACCGTTCATTCCAGGCATCTCTaGAATAGTTCAGCACCCCAA +
Preference number: 4 (lower is better)
Translates to: AVPCSATRAESQGAVVTVHSRHL*NSSAPQ
Trigger: TTGGGGTGCTGAACTATTTCAGAGATGCCTGGAATG...AACGGTTACCACTGCACCCTGGGACTCAGCTCGGGTGGCCGAGCACGGCACAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR TCA 90 bp CGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGCATGCAGGCGTCCTGGCGGAGCAGCTTaGTCAGCCGCGCAGCTCGAA +
Preference number: 4 (lower is better)
Translates to: RVDDKTHPLEHTPAACRRPGGAA*SAAQLE
Trigger: TTCGAGCTGCGCGGCTGATCAAGCTGCTCCGCCAGG...ACGCCTGCATGCAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GTCTTGGTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGCCACCCGAGCTGAGTCCAGGAGCACAGGAAGATaGAGGAGACGAAGTAGAAGT +
Preference number: 4 (lower is better)
Translates to: VLVRVVVAVPCSATRAESRSTGR*RRRSRS
Trigger: ACTTCTACTTCGTCTCCTTCATCTTCCTGTGCTCCT...GGACTCAGCTCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGACCAAGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR TCA 90 bp GCTTGCCTGAGTGAGCATTCGCTGACACTGGCGGGCTGCACAAGCCACGACTGTACATGTCATTGTAACTaGTGCGCCCACACGCAGCCG +
Preference number: 4 (lower is better)
Translates to: ACLSEHSLTLAGCTSHDCTCHCN*CAHTQP
Trigger: CGGCTGCGTGTGGGCGCATCAGTTACAATGACATGT...ACAGTCGTGGCTTGTGCAGCCCGCCAGTGTCAGCGAATGCTCACTCAGGCAAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GTGCAGCTAGCACCAGTGGTCTTGGTCAGGGTGGTGGTAGCTGTGCCGTGCTCGCCATCAGCGTGGACGTaGAGTGAACAGTCATGTCCT +
Preference number: 4 (lower is better)
Translates to: VQLAPVVLVRVVVAVPCSPSAWT*SEQSCP
Trigger: AGGACATGACTGTTCACTTCACGTCCACGCTGATGG...CGAGCACGGCACAGCTACCACCACCCTGACCAAGACCACTGGTGCTAGCTGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR TCA 90 bp CCTGCTGCATGCAGGCGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTCTTGTTATGCTCTGCATCTaGACGTCCACAGCCAGTGCT +
Preference number: 4 (lower is better)
Translates to: PAACRRLSGHGAASTSGLVMLCI*TSTASA
Trigger: AGCACTGGCTGTGGACGTTCAGATGCAGAGCATAAC...AAGACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACGCCTGCATGCAGCAGG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR TCA 90 bp CCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGCATGCAGGCTGGCCGTCTTGTAGGTaGTGCTGGGGCGGGGAGTCA +
Preference number: 4 (lower is better)
Translates to: PVWMIKLIHWNTRLLHAGWPSCR*CWGGES
Trigger: TGACTCCCCGCCCCAGCATCACCTACAAGACGGCCA...GCCTGCATGCAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GCTGCATGCAGGCGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTCTTGGTAGGCCTTGTGGAACTTaGCCATGTAGAACTCCAGGC +
Preference number: 4 (lower is better)
Translates to: AACRRLSGHGAASTSGLGRPCGT*PCRTPG
Trigger: GCCTGGAGTTCTACATGGGCAAGTTCCACAAGGCCT...ACCAAGACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACGCCTGCATGCAGC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR GCA 90 bp GCGGTCACGGTGCAGCTAGCACCAGTGGTCTTGGTCAGGGTGGTGGTAGCTGTGAGGCCTTGTGGAACTTaGCCATGTAGAACTCCAGGC +
Preference number: 4 (lower is better)
Translates to: AVTVQLAPVVLVRVVVAVRPCGT*PCRTPG
Trigger: GCCTGGAGTTCTACATGGGCAAGTTCCACAAGGCCT...CACAGCTACCACCACCCTGACCAAGACCACTGGTGCTAGCTGCACCGTGACCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR GCA 90 bp GCTAGGCTGTGTGGGTTTAGAAAAGTGGATTCTCGACCCAACACTGCCTGGGGAGGGCTGGGGCCTCCTTaGCACAGGGGAAGTCACCCA +
Preference number: 4 (lower is better)
Translates to: ARLCGFRKVDSRPNTAWGGLGPP*HRGSHP
Trigger: TGGGTGACTTCCCCTGTGGCAAGGAGGCCCCAGCCC...TCCCCAGGCAGTGTTGGGTCGAGAATCCACTTTTCTAAACCCACACAGCCTAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp CCCGAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGGCCAGTTCCAGGTGTTaGCGGCCGCATCGTTTGTAT +
Preference number: 4 (lower is better)
Translates to: PEGRLPRVDDKTHPLEHTASSRC*RPHRLY
Trigger: ATACAAACGATGCGGCCGGCAACACCTGGAACTGGC...CGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp CGGTTTAGGGTCTGGTGTGTGGTACGAGACCCAGGAAGGCAGGACAGGAAGGGGGCCAGTTCCAGGTGTTaGCGGCCGCATCGTTTGTAT +
Preference number: 4 (lower is better)
Translates to: RFRVWCVVRDPGRQDRKGASSRC*RPHRLY
Trigger: ATACAAACGATGCGGCCGGCAACACCTGGAACTGGC...CCCCTTCCTGTCCTGCCTTCCTGGGTCTCGTACCACACACCAGACCCTAAACCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GGATTCTCGACCCAACACTGCCTGGGGAAATGGCTGTGGTTCTGCATGGAATGGCGCTCGATCTGCTGCTaGCGGCGCAGCTTCAGGAAG +
Preference number: 4 (lower is better)
Translates to: GFSTQHCLGKWLWFCMEWRSICC*RRSFRK
Trigger: CTTCCTGAAGCTGCGCCGGCAGCAGCAGATCGAGCG...CCATTCCATGCAGAACCACAGCCATTTCCCCAGGCAGTGTTGGGTCGAGAATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp AGACTGAAAATGCCTCACACAAGCACGTGGTCAGCTGCCCTGTGGCTTCCTTGGAGCTCTCGCTCGATCTaGTGCTGCCGGCGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: RLKMPHTSTWSAALWLPWSSRSI*CCRRSF
Trigger: GAAGCTGCGCCGGCAGCAGCAGATCGAGCGAGAGCT...CCAAGGAAGCCACAGGGCAGCTGACCACGTGCTTGTGTGAGGCATTTTCAGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp CGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTCTTGGTCAGGGTGGTGGTGGATCAGGTCATTTCTaGTCTTCTTGGTGGCCGCTC +
Preference number: 4 (lower is better)
Translates to: RLSGHGAASTSGLGQGGGGSGHF*SSWWPL
Trigger: GAGCGGCCACCAAGAAGAGCAGAAATGACCTGATCC...ACCACCACCCTGACCAAGACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR GCA 90 bp GCTGCATGCAGGCGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTCTTGGTAACAGCACAGAGATCTaGAAACCGGTCCTCTCCCTC +
Preference number: 4 (lower is better)
Translates to: AACRRLSGHGAASTSGLGNSTEI*KPVLSL
Trigger: GAGGGAGAGGACCGGTTTGCAGATCTCTGTGCTGTT...ACCAAGACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACGCCTGCATGCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR GCA 90 bp GCGGTCACGGTGCAGCTAGCACCAGTGGTCTTGGTCAGGGTGGTGGTAGCTGTGAACAGCACAGAGATCTaGAAACCGGTCCTCTCCCTC +
Preference number: 4 (lower is better)
Translates to: AVTVQLAPVVLVRVVVAVNSTEI*KPVLSL
Trigger: GAGGGAGAGGACCGGTTTGCAGATCTCTGTGCTGTT...CACAGCTACCACCACCCTGACCAAGACCACTGGTGCTAGCTGCACCGTGACCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR GCA 90 bp TCTTCACCAAACAAGGGACCTCCCAGCATCTTGTGCACCTTGGACAGTGTCCTGGCCTTGGCCGAGTTCTaGTGCCTGGCGGCGATGGAG +
Preference number: 4 (lower is better)
Translates to: SSPNKGPPSILCTLDSVLALAEF*CLAAME
Trigger: CTCCATCGCCGCCAGGCAGCAGAACTCGGCCAAGGC...CAGGACACTGTCCAAGGTGCACAAGATGCTGGGAGGTCCCTTGTTTGGTGAAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GGGGTAGAAGCCAAGAATCCAACACAGATCATCTGGAATTTCAGAACACGGAGGGGTGCCGGTGGTGCCTaGGCGGAGGGTCGACGCCCT +
Preference number: 4 (lower is better)
Translates to: GVEAKNPTQIIWNFRTRRGAGGA*AEGRRP
Trigger: AGGGCGTCGACCCTCCGCGCAGGCACCACCGGCACC...CCTCCGTGTTCTGAAATTCCAGATGATCTGTGTTGGATTCTTGGCTTCTACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp CGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGCATGCAGGCGTTTGTCCTTGTCGCGGTaGCGGTGGTGCCTGCGCGGA +
Preference number: 4 (lower is better)
Translates to: RVDDKTHPLEHTPAACRRLSLSR*RWCLRG
Trigger: TCCGCGCAGGCACCACCGGCACCGCGACAAGGACAA...ACGCCTGCATGCAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp AGGGAGTCTCCTCGCATAAGCCACAAAGACACGTGGCAAAAAGCTGACATCTTTCGCCTTCGGGGCCTCTaGTCGGTCCTGGTCCCCCGC +
Preference number: 4 (lower is better)
Translates to: RESPRISHKDTWQKADIFRLRGL*SVLVPR
Trigger: GCGGGGGACCAGGACCGAGCAGAGGCCCCGAAGGCG...AAAGATGTCAGCTTTTTGCCACGTGTCTTTGTGGCTTATGCGAGGAGACTCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp TCCAGGGAGGACAGAGCTTGCCTGAGTGAGCATTCGCTGACACTGGCGGGCTGCGTTCCGCTGATTGTCTaGATCCTCTGGCTGTTCCTC +
Preference number: 4 (lower is better)
Translates to: SREDRACLSEHSLTLAGCVPLIV*ILWLFL
Trigger: GAGGAACAGCCAGAGGATGCAGACAATCAGCGGAAC...GCAGCCCGCCAGTGTCAGCGAATGCTCACTCAGGCAAGCTCTGTCCTCCCTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GCTGTGCCGTGCTCGGCCACCCGAGCTGAGTCCCAGGGTGCAGTGGTAACCGTTTTATACTGGAACGACTaGCGGTTTTGGGGCATGTAC +
Preference number: 4 (lower is better)
Translates to: AVPCSATRAESQGAVVTVLYWND*RFWGMY
Trigger: GTACATGCCCCAAAACCGGCAGTCGTTCCAGTATAA...AACGGTTACCACTGCACCCTGGGACTCAGCTCGGGTGGCCGAGCACGGCACAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR GCA 90 bp GAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTTCGGTGGCATTGGCCTaGTCATCACAGGCCTGGTTG +
Preference number: 4 (lower is better)
Translates to: EGRLPRVDDKTHPLEHTPSVALA*SSQAWL
Trigger: CAACCAGGCCTGTGATGAGCAGGCCAATGCCACCGA...AGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp CGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGCATGCAGGCGTTCTGCTTCCTGTCCCTaGGGCGGTGGCAGCGGTGGT +
Preference number: 4 (lower is better)
Translates to: RVDDKTHPLEHTPAACRRSASCP*GGGSGG
Trigger: ACCACCGCTGCCACCGCCGCAGGGACAGGAAGCAGA...ACGCCTGCATGCAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GCTAGGCTGTGTGGGTTTAGAAAAGTGGATTCTCGACCCAACACTGCCTGGGGATCTGCTTCCTGTCCCTaGGGCGGTGGCAGCGGTGGT +
Preference number: 4 (lower is better)
Translates to: ARLCGFRKVDSRPNTAWGSASCP*GGGSGG
Trigger: ACCACCGCTGCCACCGCCGCAGGGACAGGAAGCAGA...TCCCCAGGCAGTGTTGGGTCGAGAATCCACTTTTCTAAACCCACACAGCCTAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp CGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGCATGCAGGCGTGTGGTAGCTGTGCCGTaGTCGGCCACCCGAGCTGAG +
Preference number: 4 (lower is better)
Translates to: RVDDKTHPLEHTPAACRRVVAVP*SATRAE
Trigger: CTCAGCTCGGGTGGCCGAGCACGGCACAGCTACCAC...ACGCCTGCATGCAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp CCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGCATGCAGGCCCCCCGAGGGCCGGCTaGCCCGTGTGGATGATAAAA +
Preference number: 4 (lower is better)
Translates to: PVWMIKLIHWNTRLLHAGPPRAG*PVWMIK
Trigger: TTTTATCATCCACACGGGGCAGCCGGCCCTCGGGGG...GCCTGCATGCAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGG
59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GAAAATGCCTCACACAAGCACGTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCCCCCCGAGGGCCGGCTaGCCCGTGTGGATGATAAAA +
Preference number: 4 (lower is better)
Translates to: ENASHKHVVSCPVASLETPPRAG*PVWMIK
Trigger: TTTTATCATCCACACGGGGCAGCCGGCCCTCGGGGG...GGTTTCCAAGGAAGCCACAGGGCAGCTGACCACGTGCTTGTGTGAGGCATTTTC
59% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GGATTCTCGACCCAACACTGCCTGGGGAAATGGCTGTGGTTCTGCATGGAATGGTGGACCGGACAGGGCTaGACAGGGAGTCTCCTCGCA +
Preference number: 4 (lower is better)
Translates to: GFSTQHCLGKWLWFCMEWWTGQG*TGSLLA
Trigger: TGCGAGGAGACTCCCTGTGCAGCCCTGTCCGGTCCA...CCATTCCATGCAGAACCACAGCCATTTCCCCAGGCAGTGTTGGGTCGAGAATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp CCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGCATGCAGGCCCACTGGCAAGGGCTTaGTACCTGGCTGCCATCGCG +
Preference number: 4 (lower is better)
Translates to: PVWMIKLIHWNTRLLHAGPLARA*YLAAIA
Trigger: CGCGATGGCAGCCAGGTAGCAAGCCCTTGCCAGTGG...GCCTGCATGCAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GCCCGGCCTCAGTGGCAGGAGCCGTGTCCTCCCTCGGTCACTTGCTCTGAGTTTAATGGCTGCCTTGTTTaGCACCATGACATCCAGTGC +
Preference number: 4 (lower is better)
Translates to: ARPQWQEPCPPSVTCSEFNGCLV*HHDIQC
Trigger: GCACTGGATGTCATGGTGGCAAACAAGGCAGCCATT...AAACTCAGAGCAAGTGACCGAGGGAGGACACGGCTCCTGCCACTGAGGCCGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GCCCGGCCTCAGTGGCAGGAGCCGTGTCCTCCCTCGGTCACTTGCTCTGAGTTTAGGACAGCAAATGGCTaGCTTGTTTGCCACCATGAC +
Preference number: 4 (lower is better)
Translates to: ARPQWQEPCPPSVTCSEFRTANG*LVCHHD
Trigger: GTCATGGTGGCAAACAAGGCAGCCATTTGCTGTCCT...AAACTCAGAGCAAGTGACCGAGGGAGGACACGGCTCCTGCCACTGAGGCCGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGCACACCACCATCAACTaGTCTAAATGCTCCCTTTCT +
Preference number: 4 (lower is better)
Translates to: EVSAHFQVGPASLCRTATHTTIN*SKCSLS
Trigger: AGAAAGGGAGCATTTAGAGCAGTTGATGGTGGTGTG...CGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGCACATCCTTCTACTTTaGAACAGGAGCACAGTGATC +
Preference number: 4 (lower is better)
Translates to: EVSAHFQVGPASLCRTATHILLL*NRSTVI
Trigger: GATCACTGTGCTCCTGTTGCAAAGTAGAAGGATGTG...CGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GCTTGCCTGAGTGAGCATTCGCTGACACTGGCGGGCTGCACAAGCCACGACTGTCCGCATCTGTGCTGTTaGGGAAACAGGCCTTGTGGA +
Preference number: 4 (lower is better)
Translates to: ACLSEHSLTLAGCTSHDCPHLCC*GNRPCG
Trigger: TCCACAAGGCCTGTTTCCCCAACAGCACAGATGCGG...ACAGTCGTGGCTTGTGCAGCCCGCCAGTGTCAGCGAATGCTCACTCAGGCAAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GCTGCATGCAGGCGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTCTTGGTTTCTGCTCTTCTTGGTaGCCGCTCTCTTCAGCACGT +
Preference number: 4 (lower is better)
Translates to: AACRRLSGHGAASTSGLGFCSSW*PLSSAR
Trigger: ACGTGCTGAAGAGAGCGGCCACCAAGAAGAGCAGAA...ACCAAGACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACGCCTGCATGCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp TCCAGGGAGGACAGAGCTTGCCTGAGTGAGCATTCGCTGACACTGGCGGGCTGCTTCTGCTCTTCTTGGTaGCCGCTCTCTTCAGCACGT +
Preference number: 4 (lower is better)
Translates to: SREDRACLSEHSLTLAGCFCSSW*PLSSAR
Trigger: ACGTGCTGAAGAGAGCGGCCACCAAGAAGAGCAGAA...GCAGCCCGCCAGTGTCAGCGAATGCTCACTCAGGCAAGCTCTGTCCTCCCTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp TCCAGGGAGGACAGAGCTTGCCTGAGTGAGCATTCGCTGACACTGGCGGGCTGCGTGGGAGTCTCATCCTaGAAGTTGAACTGTCCCCCA +
Preference number: 4 (lower is better)
Translates to: SREDRACLSEHSLTLAGCVGVSS*KLNCPP
Trigger: TGGGGGACAGTTCAACTTCCAGGATGAGACTCCCAC...GCAGCCCGCCAGTGTCAGCGAATGCTCACTCAGGCAAGCTCTGTCCTCCCTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp TTGGTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGCCACCCGAGCTGAGTCCCAGTGTCGAAGTTGGTTGTaGGAGTCTCATCCTGGAAGT +
Preference number: 4 (lower is better)
Translates to: LVRVVVAVPCSATRAESQCRSWL*ESHPGS
Trigger: ACTTCCAGGATGAGACTCCCACAACCAACTTCGACA...CTGGGACTCAGCTCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGACCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp GCACCAGTGGTCTTGGTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGCCACCCGATGTCGAAGTTGGTTGTaGGAGTCTCATCCTGGAAGT +
Preference number: 4 (lower is better)
Translates to: APVVLVRVVVAVPCSATRCRSWL*ESHPGS
Trigger: ACTTCCAGGATGAGACTCCCACAACCAACTTCGACA...TCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGACCAAGACCACTGGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp GCCCGGCCTCAGTGGCAGGAGCCGTGTCCTCCCTCGGTCACTTGCTCTGAGTTTGGAAGGTGTCGAAGTTaGTTGTGGGAGTCTCATCCT +
Preference number: 4 (lower is better)
Translates to: ARPQWQEPCPPSVTCSEFGRCRS*LWESHP
Trigger: AGGATGAGACTCCCACAACCAACTTCGACACCTTCC...AAACTCAGAGCAAGTGACCGAGGGAGGACACGGCTCCTGCCACTGAGGCCGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CCTGCTGCATGCAGGCGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTCTTTCTCCTCTTCATCCTTaGTCAGCTCTTGGGCGTTGG +
Preference number: 4 (lower is better)
Translates to: PAACRRLSGHGAASTSGLSPLHP*SALGRW
Trigger: CCAACGCCCAAGAGCTGACCAAGGATGAAGAGGAGA...AAGACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACGCCTGCATGCAGCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp AGACTGAAAATGCCTCACACAAGCACGTGGTCAGCTGCCCTGTGGCTTCCTTGGCTCCAGGTCACAGTGTaGCTCCCGGGGCTGGTGGTT +
Preference number: 4 (lower is better)
Translates to: RLKMPHTSTWSAALWLPWLQVTV*LPGLVV
Trigger: AACCACCAGCCCCGGGAGCCACACTGTGACCTGGAG...CCAAGGAAGCCACAGGGCAGCTGACCACGTGCTTGTGTGAGGCATTTTCAGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGCATGCAGGCCTCCAGGTCACAGTGTaGCTCCCGGGGCTGGTGGTT +
Preference number: 4 (lower is better)
Translates to: PVWMIKLIHWNTRLLHAGLQVTV*LPGLVV
Trigger: AACCACCAGCCCCGGGAGCCACACTGTGACCTGGAG...GCCTGCATGCAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTTGGGCAGTGTGTGCATaGGACCCACAGTCACAGTCC +
Preference number: 4 (lower is better)
Translates to: EGRLPRVDDKTHPLEHTPWAVCA*DPQSQS
Trigger: GGACTGTGACTGTGGGTCCCATGCACACACTGCCCA...AGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTAATAGTGTTCGGGTCTaGGGGCTGACTGCCCATGCG +
Preference number: 4 (lower is better)
Translates to: EGRLPRVDDKTHPLEHTPNSVRV*GLTAHA
Trigger: CGCATGGGCAGTCAGCCCCCAGACCCGAACACTATT...AGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GCTTGCCTGAGTGAGCATTCGCTGACACTGGCGGGCTGCACAAGCCACGACTGTGGCGGAGCAGGTTGGTaGGGCTTAAACAGAACATGG +
Preference number: 4 (lower is better)
Translates to: ACLSEHSLTLAGCTSHDCGGAGW*GLNRTW
Trigger: CCATGTTCTGTTTAAGCCCCACCAACCTGCTCCGCC...ACAGTCGTGGCTTGTGCAGCCCGCCAGTGTCAGCGAATGCTCACTCAGGCAAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGTCAGAGCGTTGTTCCTaGGCGAGTCTGTGCGCACTG +
Preference number: 4 (lower is better)
Translates to: AGCPVWMIKLIHWNTRLLSERCS*ASLCAL
Trigger: CAGTGCGCACAGACTCGCCCAGGAACAACGCTCTGA...CAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTAGTGTTTCAGCACCATaGGCCAGCCTTCTCCCGTGG +
Preference number: 4 (lower is better)
Translates to: EGRLPRVDDKTHPLEHTPSVSAP*ASLLPW
Trigger: CCACGGGAGAAGGCTGGCCCATGGTGCTGAAACACT...AGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GCTGCATGCAGGCGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTCTTGGTCCTGCTCCTCATAGGTaGCATCCACGGAGTGTTTCA +
Preference number: 4 (lower is better)
Translates to: AACRRLSGHGAASTSGLGPAPHR*HPRSVS
Trigger: TGAAACACTCCGTGGATGCCACCTATGAGGAGCAGG...ACCAAGACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACGCCTGCATGCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp GCCCGGCCTCAGTGGCAGGAGCCGTGTCCTCCCTCGGTCACTTGCTCTGAGTTTGTCCACGTCTTATACTaGAACGACTGCCGGTTTTGG +
Preference number: 4 (lower is better)
Translates to: ARPQWQEPCPPSVTCSEFVHVLY*NDCRFW
Trigger: CCAAAACCGGCAGTCGTTCCAGTATAAGACGTGGAC...AAACTCAGAGCAAGTGACCGAGGGAGGACACGGCTCCTGCCACTGAGGCCGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp ACGCCTGCTGCATGCAGGCGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTCAGTCATGTCCTCGTTaGAGATGGGCATGTTCATGC +
Preference number: 4 (lower is better)
Translates to: TPAACRRLSGHGAASTSGQSCPR*RWACSC
Trigger: GCATGAACATGCCCATCTCCAACGAGGACATGACTG...ACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACGCCTGCATGCAGCAGGCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp GAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTCTGCTTTGTCCCAGCTaGGGCCAGCTTGATCTCCAG +
Preference number: 4 (lower is better)
Translates to: EGRLPRVDDKTHPLEHTPLLCPS*GQLDLQ
Trigger: CTGGAGATCAAGCTGGCCCCAGCTGGGACAAAGCAG...AGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGCTGCTTTGTCCCAGCTaGGGCCAGCTTGATCTCCAG +
Preference number: 4 (lower is better)
Translates to: AGCPVWMIKLIHWNTRLLLLCPS*GQLDLQ
Trigger: CTGGAGATCAAGCTGGCCCCAGCTGGGACAAAGCAG...CAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GCCCGGCCTCAGTGGCAGGAGCCGTGTCCTCCCTCGGTCACTTGCTCTGAGTTTTCTTCTGGGGCAGATTaGCCCACACAACGGAAATCT +
Preference number: 4 (lower is better)
Translates to: ARPQWQEPCPPSVTCSEFSSGAD*PTQRKS
Trigger: AGATTTCCGTTGTGTGGGCCAATCTGCCCCAGAAGA...AAACTCAGAGCAAGTGACCGAGGGAGGACACGGCTCCTGCCACTGAGGCCGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GCACCAGTGGTCTTGGTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGCCACCCGAATCAGGCTTATGGGGTaGTACCAGCAAGTCCAAAGT +
Preference number: 4 (lower is better)
Translates to: APVVLVRVVVAVPCSATRIRLMG*YQQVQS
Trigger: ACTTTGGACTTGCTGGTACCACCCCATAAGCCTGAT...TCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGACCAAGACCACTGGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp GCACCAGTGGTCTTGGTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGCCACCCGAGCTGCATCTGGTCTCTaGTGGTTTTGTTCTGCTTGT +
Preference number: 4 (lower is better)
Translates to: APVVLVRVVVAVPCSATRAASGL*WFCSAC
Trigger: ACAAGCAGAACAAAACCACCAGAGACCAGATGCAGC...TCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGACCAAGACCACTGGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp GCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGGTGTCTGCTCCAGGGTaGCCTTCAGAGGGTGGAACA +
Preference number: 4 (lower is better)
Translates to: AGCPVWMIKLIHWNTRLLVSAPG*PSEGGT
Trigger: TGTTCCACCCTCTGAAGGCCACCCTGGAGCAGACAC...CAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GAAAATGCCTCACACAAGCACGTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCGGTGGCCTGGCCTCATaGGGTGCATCCTGGGTCCTT +
Preference number: 4 (lower is better)
Translates to: ENASHKHVVSCPVASLETGGLAS*GASWVL
Trigger: AAGGACCCAGGATGCACCCCATGAGGCCAGGCCACC...GGTTTCCAAGGAAGCCACAGGGCAGCTGACCACGTGCTTGTGTGAGGCATTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp AGACTGAAAATGCCTCACACAAGCACGTGGTCAGCTGCCCTGTGGCTTCCTTGGGGTGGCCTGGCCTCATaGGGTGCATCCTGGGTCCTT +
Preference number: 4 (lower is better)
Translates to: RLKMPHTSTWSAALWLPWGGLAS*GASWVL
Trigger: AAGGACCCAGGATGCACCCCATGAGGCCAGGCCACC...CCAAGGAAGCCACAGGGCAGCTGACCACGTGCTTGTGTGAGGCATTTTCAGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGCATGCAGGCGGTGGCCTGGCCTCATaGGGTGCATCCTGGGTCCTT +
Preference number: 4 (lower is better)
Translates to: PVWMIKLIHWNTRLLHAGGGLAS*GASWVL
Trigger: AAGGACCCAGGATGCACCCCATGAGGCCAGGCCACC...GCCTGCATGCAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GCTAGGCTGTGTGGGTTTAGAAAAGTGGATTCTCGACCCAACACTGCCTGGGGACAGCGGTGGTGGTGGTaGTGCGACGACGCCTGGCTA +
Preference number: 4 (lower is better)
Translates to: ARLCGFRKVDSRPNTAWGQRWWW*CDDAWL
Trigger: TAGCCAGGCGTCGTCGCACCACCACCACCACCGCTG...TCCCCAGGCAGTGTTGGGTCGAGAATCCACTTTTCTAAACCCACACAGCCTAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp TCTTCACCAAACAAGGGACCTCCCAGCATCTTGTGCACCTTGGACAGTGTCCTGCAGCGGTGGTGGTGGTaGTGCGACGACGCCTGGCTA +
Preference number: 4 (lower is better)
Translates to: SSPNKGPPSILCTLDSVLQRWWW*CDDAWL
Trigger: TAGCCAGGCGTCGTCGCACCACCACCACCACCGCTG...CAGGACACTGTCCAAGGTGCACAAGATGCTGGGAGGTCCCTTGTTTGGTGAAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGCATGCAGGCAGCTGTTGGCGACGTTaGGTGGCTGCTGAGGGAGGG +
Preference number: 4 (lower is better)
Translates to: PVWMIKLIHWNTRLLHAGSCWRR*VAAEGG
Trigger: CCCTCCCTCAGCAGCCACCCAACGTCGCCAACAGCT...GCCTGCATGCAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp AGACTGAAAATGCCTCACACAAGCACGTGGTCAGCTGCCCTGTGGCTTCCTTGGCTCCTGGCCAGCTGTTaGCGACGTTGGGTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: RLKMPHTSTWSAALWLPWLLASC*RRWVAA
Trigger: AGCAGCCACCCAACGTCGCCAACAGCTGGCCAGGAG...CCAAGGAAGCCACAGGGCAGCTGACCACGTGCTTGTGTGAGGCATTTTCAGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GAAAATGCCTCACACAAGCACGTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCTCCTCAGGCAGGGCGTaGACAGAGGCCTCACTGTCC +
Preference number: 4 (lower is better)
Translates to: ENASHKHVVSCPVASLETSSGRA*TEASLS
Trigger: GGACAGTGAGGCCTCTGTCCACGCCCTGCCTGAGGA...GGTTTCCAAGGAAGCCACAGGGCAGCTGACCACGTGCTTGTGTGAGGCATTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp AGACTGAAAATGCCTCACACAAGCACGTGGTCAGCTGCCCTGTGGCTTCCTTGGTCCTCAGGCAGGGCGTaGACAGAGGCCTCACTGTCC +
Preference number: 4 (lower is better)
Translates to: RLKMPHTSTWSAALWLPWSSGRA*TEASLS
Trigger: GGACAGTGAGGCCTCTGTCCACGCCCTGCCTGAGGA...CCAAGGAAGCCACAGGGCAGCTGACCACGTGCTTGTGTGAGGCATTTTCAGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CTCGTGGGAGGAGGACAGCAAATGGCTGCCTTGTTTGCCACCATGACATCCAGTTGCAGTGGTAACCGTTaGGCACGCGGCGGAGAGGGT +
Preference number: 4 (lower is better)
Translates to: LVGGGQQMAALFATMTSSCSGNR*ARGGEG
Trigger: ACCCTCTCCGCCGCGTGCCCAACGGTTACCACTGCA...ACTGGATGTCATGGTGGCAAACAAGGCAGCCATTTGCTGTCCTCCTCCCACGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CCCGAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGGCCGGCTGCCCCGTGTaGATGATAAAACTCATCCAC +
Preference number: 4 (lower is better)
Translates to: PEGRLPRVDDKTHPLEHTAGCPV*MIKLIH
Trigger: GTGGATGAGTTTTATCATCCACACGGGGCAGCCGGC...CGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp AGACTGAAAATGCCTCACACAAGCACGTGGTCAGCTGCCCTGTGGCTTCCTTGGCCCCGGCGAAGTGGATaGGTGAGGAGTTGGCCGTCT +
Preference number: 4 (lower is better)
Translates to: RLKMPHTSTWSAALWLPWPRRSG*VRSWPS
Trigger: AGACGGCCAACTCCTCACCCATCCACTTCGCCGGGG...CCAAGGAAGCCACAGGGCAGCTGACCACGTGCTTGTGTGAGGCATTTTCAGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp AGACTGAAAATGCCTCACACAAGCACGTGGTCAGCTGCCCTGTGGCTTCCTTGGAGAAGGCAGGGAGGCTaGTCTGAGCCCCGGCGAAGT +
Preference number: 4 (lower is better)
Translates to: RLKMPHTSTWSAALWLPWRRQGG*SEPRRS
Trigger: ACTTCGCCGGGGCTCAGACCAGCCTCCCTGCCTTCT...CCAAGGAAGCCACAGGGCAGCTGACCACGTGCTTGTGTGAGGCATTTTCAGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CTCGTGGGAGGAGGACAGCAAATGGCTGCCTTGTTTGCCACCATGACATCCAGTAGAAGGCAGGGAGGCTaGTCTGAGCCCCGGCGAAGT +
Preference number: 4 (lower is better)
Translates to: LVGGGQQMAALFATMTSSRRQGG*SEPRRS
Trigger: ACTTCGCCGGGGCTCAGACCAGCCTCCCTGCCTTCT...ACTGGATGTCATGGTGGCAAACAAGGCAGCCATTTGCTGTCCTCCTCCCACGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CCCGAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGTCCAAGCACCCATGCTaGATGCTGAGTCCCAGGACA +
Preference number: 4 (lower is better)
Translates to: PEGRLPRVDDKTHPLEHTSKHPC*MLSPRT
Trigger: TGTCCTGGGACTCAGCATCCAGCATGGGTGCTTGGA...CGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGCATGCAGGCCCGTCTACGTCCACCTaGACCGGACAGGGCTGCACA +
Preference number: 4 (lower is better)
Translates to: PVWMIKLIHWNTRLLHAGPSTST*TGQGCT
Trigger: TGTGCAGCCCTGTCCGGTCCAGGTGGACGTAGACGG...GCCTGCATGCAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCCCTTCCACTCGTGGGAGGAGGGAGGAGGACAGCAAATaGCTGCCTTGTTTGCCACCA +
Preference number: 4 (lower is better)
Translates to: VVSCPVASLETPSTRGRREEDSK*LPCLPP
Trigger: TGGTGGCAAACAAGGCAGCCATTTGCTGTCCTCCTC...CCTCCTCCCACGAGTGGAAGGGGTTTCCAAGGAAGCCACAGGGCAGCTGACCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGCCTCACACAAGCACGTaGTCAGCTGCCCTGTGGCTT +
Preference number: 4 (lower is better)
Translates to: AGCPVWMIKLIHWNTRLLPHTST*SAALWL
Trigger: AAGCCACAGGGCAGCTGACCACGTGCTTGTGTGAGG...CAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTCCTCACACAAGCACGTaGTCAGCTGCCCTGTGGCTT +
Preference number: 4 (lower is better)
Translates to: EGRLPRVDDKTHPLEHTPPHTST*SAALWL
Trigger: AAGCCACAGGGCAGCTGACCACGTGCTTGTGTGAGG...AGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CCCCTCCGTCCCGAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCCAACACAGATCATCTaGAATTTCAGAACACGGAGG +
Preference number: 4 (lower is better)
Translates to: PLRPEVSAHFQVGPASLCPTQII*NFRTRR
Trigger: CCTCCGTGTTCTGAAATTCCAGATGATCTGTGTTGG...GCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTCGGGACGGAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp TGGCGCCAGGACAGTGCTGGGCATCAGGTGCCCGGCCTCAGTGGCAGGAGCCGTTGTTGCATAGCCCTATaGGTTAATGACATCCACACA +
Preference number: 4 (lower is better)
Translates to: WRQDSAGHQVPGLSGRSRCCIAL*VNDIHT
Trigger: TGTGTGGATGTCATTAACCCATAGGGCTATGCAACA...ACGGCTCCTGCCACTGAGGCCGGGCACCTGATGCCCAGCACTGTCCTGGCGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GTCTTGGTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGCCACCCGAGCTGAGTCCTATTGTCAAAGTTGGTaGTGCCAAAGTTGGGTCCTG +
Preference number: 4 (lower is better)
Translates to: VLVRVVVAVPCSATRAESYCQSW*CQSWVL
Trigger: CAGGACCCAACTTTGGCATCACCAACTTTGACAATA...GGACTCAGCTCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGACCAAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR TCA 90 bp AGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGTTATTGTCAAAGTTGGTaGTGCCAAAGTTGGGTCCTG +
Preference number: 4 (lower is better)
Translates to: RSRRTFRWALLLCAARPRYCQSW*CQSWVL
Trigger: CAGGACCCAACTTTGGCATCACCAACTTTGACAATA...ACGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GCTGCATGCAGGCGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTCTTGGTGGGCGAAGACCACAATaGACAGGAAGAGCAAGAAGA +
Preference number: 4 (lower is better)
Translates to: AACRRLSGHGAASTSGLGGRRPQ*TGRARR
Trigger: TCTTCTTGCTCTTCCTGTTCATTGTGGTCTTCGCCC...ACCAAGACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACGCCTGCATGCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR TCA 90 bp CTCGTGGGAGGAGGACAGCAAATGGCTGCCTTGTTTGCCACCATGACATCCAGTGGATCTGGAAGACAGTaGGGATGGCGGCAGGGAAGG +
Preference number: 4 (lower is better)
Translates to: LVGGGQQMAALFATMTSSGSGRQ*GWRQGR
Trigger: CCTTCCCTGCCGCCATCCTCACTGTCTTCCAGATCC...ACTGGATGTCATGGTGGCAAACAAGGCAGCCATTTGCTGTCCTCCTCCCACGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGACAGTGTCAGGACAATaGAGTAAAAGGACGAGAACA +
Preference number: 4 (lower is better)
Translates to: EVSAHFQVGPASLCRTATTVSGQ*SKRTRT
Trigger: TGTTCTCGTCCTTTTACTTCATTGTCCTGACACTGT...CGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp TCTTCACCAAACAAGGGACCTCCCAGCATCTTGTGCACCTTGGACAGTGTCCTGTTCTCCACAGCCTCGTaGGCAGGCTGCGCCTTGTGC +
Preference number: 4 (lower is better)
Translates to: SSPNKGPPSILCTLDSVLFSTAS*AGCALC
Trigger: GCACAAGGCGCAGCCTGCTCACGAGGCTGTGGAGAA...CAGGACACTGTCCAAGGTGCACAAGATGCTGGGAGGTCCCTTGTTTGGTGAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp CGGTTTAGGGTCTGGTGTGTGGTACGAGACCCAGGAAGGCAGGACAGGAAGGGGAGAACAGCATGGCAATaGGCAGACACACGTAGGGCA +
Preference number: 4 (lower is better)
Translates to: RFRVWCVVRDPGRQDRKGRTAWQ*ADTRRA
Trigger: TGCCCTACGTGTGTCTGCTCATTGCCATGCTGTTCT...CCCCTTCCTGTCCTGCCTTCCTGGGTCTCGTACCACACACCAGACCCTAAACCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp CCACGTGAAGGGTGCTCCCCACAGGACGCAGAGCTCCTCACAACGGCTCCAAGCAGGAGCACAGGAAGATaGAGGAGACGAAGTAGAAGT +
Preference number: 4 (lower is better)
Translates to: PREGCSPQDAELLTTAPSRSTGR*RRRSRS
Trigger: ACTTCTACTTCGTCTCCTTCATCTTCCTGTGCTCCT...GCTTGGAGCCGTTGTGAGGAGCTCTGCGTCCTGTGGGGAGCACCCTTCACGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp CGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGCATGCAGGCGTTGGCCGTCTTGTAGGTaGTGCTGGGGCGGGGAGTCA +
Preference number: 4 (lower is better)
Translates to: RVDDKTHPLEHTPAACRRWPSCR*CWGGES
Trigger: TGACTCCCCGCCCCAGCATCACCTACAAGACGGCCA...ACGCCTGCATGCAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GCTTGCCTGAGTGAGCATTCGCTGACACTGGCGGGCTGCACAAGCCACGACTGTCCTTGTTTGCCACCATaGCATCCAGTGCTCTCCACT +
Preference number: 4 (lower is better)
Translates to: ACLSEHSLTLAGCTSHDCPCLPP*HPVLST
Trigger: AGTGGAGAGCACTGGATGTCATGGTGGCAAACAAGG...ACAGTCGTGGCTTGTGCAGCCCGCCAGTGTCAGCGAATGCTCACTCAGGCAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp CCCCTCCGTCCCGAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCATATGCAGAACAGACTaGAAATGCCTCACACAAGCA +
Preference number: 4 (lower is better)
Translates to: PLRPEVSAHFQVGPASLCICRTD*KCLTQA
Trigger: TGCTTGTGTGAGGCATTTTCAGTCTGTTCTGCATAT...GCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTCGGGACGGAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCCCTTCCACTCGTGGGAGGAGGCCACAGAGTGTGCCCTaGGAATCATATGCAGAACAG +
Preference number: 4 (lower is better)
Translates to: VVSCPVASLETPSTRGRRPQSVP*ESYAEQ
Trigger: CTGTTCTGCATATGATTCTCAGGGCACACTCTGTGG...CCTCCTCCCACGAGTGGAAGGGGTTTCCAAGGAAGCCACAGGGCAGCTGACCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GAAAATGCCTCACACAAGCACGTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCGGGTCAGACCTCACTTaGCTGCCTGCTCCCTGTGTC +
Preference number: 4 (lower is better)
Translates to: ENASHKHVVSCPVASLETGSDLT*LPAPCV
Trigger: GACACAGGGAGCAGGCAGTCAAGTGAGGTCTGACCC...GGTTTCCAAGGAAGCCACAGGGCAGCTGACCACGTGCTTGTGTGAGGCATTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GGATTCTCGACCCAACACTGCCTGGGGAAATGGCTGTGGTTCTGCATGGAATGGGGGTCAGACCTCACTTaGCTGCCTGCTCCCTGTGTC +
Preference number: 4 (lower is better)
Translates to: GFSTQHCLGKWLWFCMEWGSDLT*LPAPCV
Trigger: GACACAGGGAGCAGGCAGTCAAGTGAGGTCTGACCC...CCATTCCATGCAGAACCACAGCCATTTCCCCAGGCAGTGTTGGGTCGAGAATCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GCCCGGCCTCAGTGGCAGGAGCCGTGTCCTCCCTCGGTCACTTGCTCTGAGTTTCCGGAGAAGACACAGTaGGAAACAAAACCCAAAGTC +
Preference number: 4 (lower is better)
Translates to: ARPQWQEPCPPSVTCSEFPEKTQ*ETKPKV
Trigger: GACTTTGGGTTTTGTTTCTCACTGTGTCTTCTCCGG...AAACTCAGAGCAAGTGACCGAGGGAGGACACGGCTCCTGCCACTGAGGCCGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp CCTGCTGCATGCAGGCGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTCTTGACTTGAGCACCACCTaGAAACTTGGAATCCCAGAC +
Preference number: 4 (lower is better)
Translates to: PAACRRLSGHGAASTSGLDLSTT*KLGIPD
Trigger: GTCTGGGATTCCAAGTTTGCAGGTGGTGCTCAAGTC...AAGACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACGCCTGCATGCAGCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR GCA 90 bp GTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCCCTTCCACTCGTGGGAGGAGGGACTTGAGCACCACCTaGAAACTTGGAATCCCAGAC +
Preference number: 4 (lower is better)
Translates to: VVSCPVASLETPSTRGRRDLSTT*KLGIPD
Trigger: GTCTGGGATTCCAAGTTTGCAGGTGGTGCTCAAGTC...CCTCCTCCCACGAGTGGAAGGGGTTTCCAAGGAAGCCACAGGGCAGCTGACCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGGCCAGTTCCAGGTGTTaGCGGCCGCATCGTTTGTAT +
Preference number: 4 (lower is better)
Translates to: AGCPVWMIKLIHWNTRLLASSRC*RPHRLY
Trigger: ATACAAACGATGCGGCCGGCAACACCTGGAACTGGC...CAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp TCTTCACCAAACAAGGGACCTCCCAGCATCTTGTGCACCTTGGACAGTGTCCTGTCTCGCTCGATCTGCTaGTGCCGGCGCAGCTTCAGG +
Preference number: 4 (lower is better)
Translates to: SSPNKGPPSILCTLDSVLSRSIC*CRRSFR
Trigger: CCTGAAGCTGCGCCGGCAGCAGCAGATCGAGCGAGA...CAGGACACTGTCCAAGGTGCACAAGATGCTGGGAGGTCCCTTGTTTGGTGAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GCTAGGCTGTGTGGGTTTAGAAAAGTGGATTCTCGACCCAACACTGCCTGGGGAAGCTCTCGCTCGATCTaGTGCTGCCGGCGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: ARLCGFRKVDSRPNTAWGSSRSI*CCRRSF
Trigger: GAAGCTGCGCCGGCAGCAGCAGATCGAGCGAGAGCT...TCCCCAGGCAGTGTTGGGTCGAGAATCCACTTTTCTAAACCCACACAGCCTAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GGATTCTCGACCCAACACTGCCTGGGGAAATGGCTGTGGTTCTGCATGGAATGGTTGGCCGAGTTCTGCTaGCTGGCGGCGATGGAGATG +
Preference number: 4 (lower is better)
Translates to: GFSTQHCLGKWLWFCMEWLAEFC*LAAMEM
Trigger: CATCTCCATCGCCGCCAGGCAGCAGAACTCGGCCAA...CCATTCCATGCAGAACCACAGCCATTTCCCCAGGCAGTGTTGGGTCGAGAATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp CCCGAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGGTTCCGCTGATTGTCTaGATCCTCTGGCTGTTCCTC +
Preference number: 4 (lower is better)
Translates to: PEGRLPRVDDKTHPLEHTVPLIV*ILWLFL
Trigger: GAGGAACAGCCAGAGGATGCAGACAATCAGCGGAAC...CGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GCTAGGCTGTGTGGGTTTAGAAAAGTGGATTCTCGACCCAACACTGCCTGGGGATCCTGGGCGAGTCTGTaGGCACTGGGTCCTCAGCAG +
Preference number: 4 (lower is better)
Translates to: ARLCGFRKVDSRPNTAWGSWASL*ALGPQQ
Trigger: CTGCTGAGGACCCAGTGCGCACAGACTCGCCCAGGA...TCCCCAGGCAGTGTTGGGTCGAGAATCCACTTTTCTAAACCCACACAGCCTAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp TGGCGCCAGGACAGTGCTGGGCATCAGGTGCCCGGCCTCAGTGGCAGGAGCCGTCTCGTACTCATAGGGTaGATCATAGAACTTCATCAT +
Preference number: 4 (lower is better)
Translates to: WRQDSAGHQVPGLSGRSRLVLIG*IIELHH
Trigger: ATGATGAAGTTCTATGATGCACCCTATGAGTACGAG...ACGGCTCCTGCCACTGAGGCCGGGCACCTGATGCCCAGCACTGTCCTGGCGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp CCCCTCCGTCCCGAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCGAATATCATCAGAGCTaGATAAACCTTCCCCACTGT +
Preference number: 4 (lower is better)
Translates to: PLRPEVSAHFQVGPASLCEYHQS*INLPHC
Trigger: ACAGTGGGGAAGGTTTATGCAGCTCTGATGATATTC...GCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTCGGGACGGAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GCTAGGCTGTGTGGGTTTAGAAAAGTGGATTCTCGACCCAACACTGCCTGGGGAGGTCCGGGGTGGTGCTaGAAAGATGAGTCCCACGGG +
Preference number: 4 (lower is better)
Translates to: ARLCGFRKVDSRPNTAWGGPGWC*KDESHG
Trigger: CCCGTGGGACTCATCTTTGCAGCACCACCCCGGACC...TCCCCAGGCAGTGTTGGGTCGAGAATCCACTTTTCTAAACCCACACAGCCTAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp CCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGCATGCAGGCCCGGCCCCACAGCACTaGTTGGTGCGCCATCCATAT +
Preference number: 4 (lower is better)
Translates to: PVWMIKLIHWNTRLLHAGPAPQH*LVRHPY
Trigger: ATATGGATGGCGCACCAAGCAGTGCTGTGGGGCCGG...GCCTGCATGCAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp CTCGTGGGAGGAGGACAGCAAATGGCTGCCTTGTTTGCCACCATGACATCCAGTCTGAGGGGGTCTCTCTaGAGCAGGGCGTTGTGTTCG +
Preference number: 4 (lower is better)
Translates to: LVGGGQQMAALFATMTSSLRGSL*SRALCS
Trigger: CGAACACAACGCCCTGCTGCAGAGAGACCCCCTCAG...ACTGGATGTCATGGTGGCAAACAAGGCAGCCATTTGCTGTCCTCCTCCCACGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp TCTTCACCAAACAAGGGACCTCCCAGCATCTTGTGCACCTTGGACAGTGTCCTGCTTTCAGGTGGGCCCTaGTTCTCTGTGCCGCACGGC +
Preference number: 4 (lower is better)
Translates to: SSPNKGPPSILCTLDSVLLSGGP*FSVPHG
Trigger: GCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAG...CAGGACACTGTCCAAGGTGCACAAGATGCTGGGAGGTCCCTTGTTTGGTGAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GCTAGGCTGTGTGGGTTTAGAAAAGTGGATTCTCGACCCAACACTGCCTGGGGATGGACCGGACAGGGCTaGACAGGGAGTCTCCTCGCA +
Preference number: 4 (lower is better)
Translates to: ARLCGFRKVDSRPNTAWGWTGQG*TGSLLA
Trigger: TGCGAGGAGACTCCCTGTGCAGCCCTGTCCGGTCCA...TCCCCAGGCAGTGTTGGGTCGAGAATCCACTTTTCTAAACCCACACAGCCTAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTCACCATGACATCCAGTaGTCTCCACTGGCAAGGGCT +
Preference number: 4 (lower is better)
Translates to: EGRLPRVDDKTHPLEHTPHHDIQ*SPLARA
Trigger: AGCCCTTGCCAGTGGAGAGCACTGGATGTCATGGTG...AGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GCCCGGCCTCAGTGGCAGGAGCCGTGTCCTCCCTCGGTCACTTGCTCTGAGTTTTTGACTGGTTCCAGATaGAGACAACTGGGTGATGCA +
Preference number: 4 (lower is better)
Translates to: ARPQWQEPCPPSVTCSEFLTGSR*RQLGDA
Trigger: TGCATCACCCAGTTGTCTGCATCTGGAACCAGTCAA...AAACTCAGAGCAAGTGACCGAGGGAGGACACGGCTCCTGCCACTGAGGCCGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GCTGCATGCAGGCGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTCTTGGTGATCATATACTCGAATaGAGGCCACTCGGTGATGCG +
Preference number: 4 (lower is better)
Translates to: AACRRLSGHGAASTSGLGDHILE*RPLGDA
Trigger: CGCATCACCGAGTGGCCTCCATTCGAGTATATGATC...ACCAAGACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACGCCTGCATGCAGC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp CCTGCTGCATGCAGGCGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTCTTCACCACCTGCAAACTTaGAATCCCAGACACCAGCTT +
Preference number: 4 (lower is better)
Translates to: PAACRRLSGHGAASTSGLHHLQT*NPRHQL
Trigger: AAGCTGGTGTCTGGGATTCCAAGTTTGCAGGTGGTG...AAGACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACGCCTGCATGCAGCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp GCGGTCACGGTGCAGCTAGCACCAGTGGTCTTGGTCAGGGTGGTGGTAGCTGTGCACCACCTGCAAACTTaGAATCCCAGACACCAGCTT +
Preference number: 4 (lower is better)
Translates to: AVTVQLAPVVLVRVVVAVHHLQT*NPRHQL
Trigger: AAGCTGGTGTCTGGGATTCCAAGTTTGCAGGTGGTG...CACAGCTACCACCACCCTGACCAAGACCACTGGTGCTAGCTGCACCGTGACCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp TCCAGGGAGGACAGAGCTTGCCTGAGTGAGCATTCGCTGACACTGGCGGGCTGCCACCACCTGCAAACTTaGAATCCCAGACACCAGCTT +
Preference number: 4 (lower is better)
Translates to: SREDRACLSEHSLTLAGCHHLQT*NPRHQL
Trigger: AAGCTGGTGTCTGGGATTCCAAGTTTGCAGGTGGTG...GCAGCCCGCCAGTGTCAGCGAATGCTCACTCAGGCAAGCTCTGTCCTCCCTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GGGGTAGAAGCCAAGAATCCAACACAGATCATCTGGAATTTCAGAACACGGAGGCTCGCACAGCCGGGCTaGGGCCTCCTTGCCACAGGG +
Preference number: 4 (lower is better)
Translates to: GVEAKNPTQIIWNFRTRRLAQPG*GLLATG
Trigger: CCCTGTGGCAAGGAGGCCCCAGCCCGGCTGTGCGAG...CCTCCGTGTTCTGAAATTCCAGATGATCTGTGTTGGATTCTTGGCTTCTACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGCATGCAGGCCCCTCTCTCGCTCCTTaGCAAACTCCCCCGAGAGCA +
Preference number: 4 (lower is better)
Translates to: PVWMIKLIHWNTRLLHAGPSLAP*QTPPRA
Trigger: TGCTCTCGGGGGAGTTTGCCAAGGAGCGAGAGAGGG...GCCTGCATGCAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp TCCAGGGAGGACAGAGCTTGCCTGAGTGAGCATTCGCTGACACTGGCGGGCTGCCATTTCTGCTCTTCTTaGTGGCCGCTCTCTTCAGCA +
Preference number: 4 (lower is better)
Translates to: SREDRACLSEHSLTLAGCHFCSS*WPLSSA
Trigger: TGCTGAAGAGAGCGGCCACCAAGAAGAGCAGAAATG...GCAGCCCGCCAGTGTCAGCGAATGCTCACTCAGGCAAGCTCTGTCCTCCCTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CCCGAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGTCTCCCTCCTCTGCGTaGATCAGGTCATTTCTGCTC +
Preference number: 4 (lower is better)
Translates to: PEGRLPRVDDKTHPLEHTSPSSA*IRSFLL
Trigger: GAGCAGAAATGACCTGATCCACGCAGAGGAGGGAGA...CGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp ACGCCTGCTGCATGCAGGCGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTGGTTGTAATGCACCATaGCCACACACAGTGTGTTCA +
Preference number: 4 (lower is better)
Translates to: TPAACRRLSGHGAASTSGGCNAP*PHTVCS
Trigger: TGAACACACTGTGTGTGGCCATGGTGCATTACAACC...ACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACGCCTGCATGCAGCAGGCGT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp GCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGACCGGAAGTAGCTTCTaGGCCCCAGGCCATACATCT +
Preference number: 4 (lower is better)
Translates to: AGCPVWMIKLIHWNTRLLTGSSF*APGHTS
Trigger: AGATGTATGGCCTGGGGCCCAGAAGCTACTTCCGGT...CAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTACCGGAAGTAGCTTCTaGGCCCCAGGCCATACATCT +
Preference number: 4 (lower is better)
Translates to: EGRLPRVDDKTHPLEHTPTGSSF*APGHTS
Trigger: AGATGTATGGCCTGGGGCCCAGAAGCTACTTCCGGT...AGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CCCGAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGGTGGGAGTCTCATCCTaGAAGTTGAACTGTCCCCCA +
Preference number: 4 (lower is better)
Translates to: PEGRLPRVDDKTHPLEHTVGVSS*KLNCPP
Trigger: TGGGGGACAGTTCAACTTCCAGGATGAGACTCCCAC...CGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTCGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp AGACTGAAAATGCCTCACACAAGCACGTGGTCAGCTGCCCTGTGGCTTCCTTGGCCGAGTTCTGCTGCCTaGCGGCGATGGAGATGTTCG +
Preference number: 4 (lower is better)
Translates to: RLKMPHTSTWSAALWLPWPSSAA*RRWRCS
Trigger: CGAACATCTCCATCGCCGCCAGGCAGCAGAACTCGG...CCAAGGAAGCCACAGGGCAGCTGACCACGTGCTTGTGTGAGGCATTTTCAGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGCATGCAGGCGTCTCCAGGTCACAGTGTaGCTCCCGGGGCTGGTGGTT +
Preference number: 4 (lower is better)
Translates to: RVDDKTHPLEHTPAACRRLQVTV*LPGLVV
Trigger: AACCACCAGCCCCGGGAGCCACACTGTGACCTGGAG...ACGCCTGCATGCAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGCAGTCACAGTCCCACTaGTCTCCAGGTCACAGTGTG +
Preference number: 4 (lower is better)
Translates to: AGCPVWMIKLIHWNTRLLQSQSH*SPGHSV
Trigger: CACACTGTGACCTGGAGACCAGTGGGACTGTGACTG...CAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGTGTTCCTCCACCTTCTaGAGACAGGTGCTGGGCAGT +
Preference number: 4 (lower is better)
Translates to: AGCPVWMIKLIHWNTRLLCSSTF*RQVLGS
Trigger: ACTGCCCAGCACCTGTCTCCAGAAGGTGGAGGAACA...CAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTTGTTCCTCCACCTTCTaGAGACAGGTGCTGGGCAGT +
Preference number: 4 (lower is better)
Translates to: EGRLPRVDDKTHPLEHTPCSSTF*RQVLGS
Trigger: ACTGCCCAGCACCTGTCTCCAGAAGGTGGAGGAACA...AGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GGATTCTCGACCCAACACTGCCTGGGGAAATGGCTGTGGTTCTGCATGGAATGGGGTCCACGTTACCACTaGGAACGACCGTGGCTTCCC +
Preference number: 4 (lower is better)
Translates to: GFSTQHCLGKWLWFCMEWGPRYH*ERPWLP
Trigger: GGGAAGCCACGGTCGTTCCCAGTGGTAACGTGGACC...CCATTCCATGCAGAACCACAGCCATTTCCCCAGGCAGTGTTGGGTCGAGAATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp AGACTGAAAATGCCTCACACAAGCACGTGGTCAGCTGCCCTGTGGCTTCCTTGGGAACATGGAGCTGTATaGGACGATAGGCCGGGGGCC +
Preference number: 4 (lower is better)
Translates to: RLKMPHTSTWSAALWLPWEHGAV*DDRPGA
Trigger: GGCCCCCGGCCTATCGTCCCATACAGCTCCATGTTC...CCAAGGAAGCCACAGGGCAGCTGACCACGTGCTTGTGTGAGGCATTTTCAGTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GGATTCTCGACCCAACACTGCCTGGGGAAATGGCTGTGGTTCTGCATGGAATGGGAACATGGAGCTGTATaGGACGATAGGCCGGGGGCC +
Preference number: 4 (lower is better)
Translates to: GFSTQHCLGKWLWFCMEWEHGAV*DDRPGA
Trigger: GGCCCCCGGCCTATCGTCCCATACAGCTCCATGTTC...CCATTCCATGCAGAACCACAGCCATTTCCCCAGGCAGTGTTGGGTCGAGAATCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CCTGCTGCATGCAGGCGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTCTTCCCTCTCCAGCTCCTTaGATTCATCTGTGCAGTAGA +
Preference number: 4 (lower is better)
Translates to: PAACRRLSGHGAASTSGLPSPAP*IHLCSR
Trigger: TCTACTGCACAGATGAATCCAAGGAGCTGGAGAGGG...AAGACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACGCCTGCATGCAGCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp CCCGAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTCCTCATAGGTaGCATCCACGGAGTGTTTCA +
Preference number: 4 (lower is better)
Translates to: PEGRLPRVDDKTHPLEHTPAPHR*HPRSVS
Trigger: TGAAACACTCCGTGGATGCCACCTATGAGGAGCAGG...CGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CGGTTTAGGGTCTGGTGTGTGGTACGAGACCCAGGAAGGCAGGACAGGAAGGGGCCTGCTCCTCATAGGTaGCATCCACGGAGTGTTTCA +
Preference number: 4 (lower is better)
Translates to: RFRVWCVVRDPGRQDRKGPAPHR*HPRSVS
Trigger: TGAAACACTCCGTGGATGCCACCTATGAGGAGCAGG...CCCCTTCCTGTCCTGCCTTCCTGGGTCTCGTACCACACACCAGACCCTAAACCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GAAAATGCCTCACACAAGCACGTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCGCGGTACCCAGGGCTTaGACCCTGCTCCTCATAGGT +
Preference number: 4 (lower is better)
Translates to: ENASHKHVVSCPVASLETAVPRA*TLLLIG
Trigger: ACCTATGAGGAGCAGGGTCCAAGCCCTGGGTACCGC...GGTTTCCAAGGAAGCCACAGGGCAGCTGACCACGTGCTTGTGTGAGGCATTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GGATTCTCGACCCAACACTGCCTGGGGAAATGGCTGTGGTTCTGCATGGAATGGGCGGTACCCAGGGCTTaGACCCTGCTCCTCATAGGT +
Preference number: 4 (lower is better)
Translates to: GFSTQHCLGKWLWFCMEWAVPRA*TLLLIG
Trigger: ACCTATGAGGAGCAGGGTCCAAGCCCTGGGTACCGC...CCATTCCATGCAGAACCACAGCCATTTCCCCAGGCAGTGTTGGGTCGAGAATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGCATGCAGGCGCGGTACCCAGGGCTTaGACCCTGCTCCTCATAGGT +
Preference number: 4 (lower is better)
Translates to: PVWMIKLIHWNTRLLHAGAVPRA*TLLLIG
Trigger: ACCTATGAGGAGCAGGGTCCAAGCCCTGGGTACCGC...GCCTGCATGCAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GCTGCATGCAGGCGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTCTTGGTGTCCACGTCTTATACTaGAACGACTGCCGGTTTTGG +
Preference number: 4 (lower is better)
Translates to: AACRRLSGHGAASTSGLGVHVLY*NDCRFW
Trigger: CCAAAACCGGCAGTCGTTCCAGTATAAGACGTGGAC...ACCAAGACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACGCCTGCATGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp GTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCCCTTCCACTCGTGGGAGGAGGGTCCACGTCTTATACTaGAACGACTGCCGGTTTTGG +
Preference number: 4 (lower is better)
Translates to: VVSCPVASLETPSTRGRRVHVLY*NDCRFW
Trigger: CCAAAACCGGCAGTCGTTCCAGTATAAGACGTGGAC...CCTCCTCCCACGAGTGGAAGGGGTTTCCAAGGAAGCCACAGGGCAGCTGACCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GAAAATGCCTCACACAAGCACGTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCACAGCAGGATGCGGATaGTGTAGCCCTGGCGGAGCA +
Preference number: 4 (lower is better)
Translates to: ENASHKHVVSCPVASLETTAGCG*CSPGGA
Trigger: TGCTCCGCCAGGGCTACACCATCCGCATCCTGCTGT...GGTTTCCAAGGAAGCCACAGGGCAGCTGACCACGTGCTTGTGTGAGGCATTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GGATTCTCGACCCAACACTGCCTGGGGAAATGGCTGTGGTTCTGCATGGAATGGACAGCAGGATGCGGATaGTGTAGCCCTGGCGGAGCA +
Preference number: 4 (lower is better)
Translates to: GFSTQHCLGKWLWFCMEWTAGCG*CSPGGA
Trigger: TGCTCCGCCAGGGCTACACCATCCGCATCCTGCTGT...CCATTCCATGCAGAACCACAGCCATTTCCCCAGGCAGTGTTGGGTCGAGAATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GCTTGCCTGAGTGAGCATTCGCTGACACTGGCGGGCTGCACAAGCCACGACTGTGTCCGGAAGTTGTTGTaGCGGTTGATGCTGGTGTCA +
Preference number: 4 (lower is better)
Translates to: ACLSEHSLTLAGCTSHDCVRKLL*RLMLVS
Trigger: TGACACCAGCATCAACCGCCACAACAACTTCCGGAC...ACAGTCGTGGCTTGTGCAGCCCGCCAGTGTCAGCGAATGCTCACTCAGGCAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGCACTTCCACACTCGGTaGCATTGGCCTGCTCATCAC +
Preference number: 4 (lower is better)
Translates to: AGCPVWMIKLIHWNTRLLHFHTR*HWPAHH
Trigger: GTGATGAGCAGGCCAATGCCACCGAGTGTGGAAGTG...CAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp TCCAGGGAGGACAGAGCTTGCCTGAGTGAGCATTCGCTGACACTGGCGGGCTGCTGTCCTCGTTGGAGATaGGCATGTTCATGCGAACCA +
Preference number: 4 (lower is better)
Translates to: SREDRACLSEHSLTLAGCCPRWR*ACSCEP
Trigger: TGGTTCGCATGAACATGCCCATCTCCAACGAGGACA...GCAGCCCGCCAGTGTCAGCGAATGCTCACTCAGGCAAGCTCTGTCCTCCCTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCCCTTCCACTCGTGGGAGGAGGCAGTCATGTCCTCGTTaGAGATGGGCATGTTCATGC +
Preference number: 4 (lower is better)
Translates to: VVSCPVASLETPSTRGRRQSCPR*RWACSC
Trigger: GCATGAACATGCCCATCTCCAACGAGGACATGACTG...CCTCCTCCCACGAGTGGAAGGGGTTTCCAAGGAAGCCACAGGGCAGCTGACCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp TCCAGGGAGGACAGAGCTTGCCTGAGTGAGCATTCGCTGACACTGGCGGGCTGCCAGTCATGTCCTCGTTaGAGATGGGCATGTTCATGC +
Preference number: 4 (lower is better)
Translates to: SREDRACLSEHSLTLAGCQSCPR*RWACSC
Trigger: GCATGAACATGCCCATCTCCAACGAGGACATGACTG...GCAGCCCGCCAGTGTCAGCGAATGCTCACTCAGGCAAGCTCTGTCCTCCCTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GTGCAGCTAGCACCAGTGGTCTTGGTCAGGGTGGTGGTAGCTGTGCCGTGCTCGTCTTCTGGGGCAGATTaGCCCACACAACGGAAATCT +
Preference number: 4 (lower is better)
Translates to: VQLAPVVLVRVVVAVPCSSSGAD*PTQRKS
Trigger: AGATTTCCGTTGTGTGGGCCAATCTGCCCCAGAAGA...CGAGCACGGCACAGCTACCACCACCCTGACCAAGACCACTGGTGCTAGCTGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp GCTAGGCTGTGTGGGTTTAGAAAAGTGGATTCTCGACCCAACACTGCCTGGGGAGACACAGGACCCATCTaGGAGAGGCCTCCAGGAGCC +
Preference number: 4 (lower is better)
Translates to: ARLCGFRKVDSRPNTAWGDTGPI*ERPPGA
Trigger: GGCTCCTGGAGGCCTCTCCCAGATGGGTCCTGTGTC...TCCCCAGGCAGTGTTGGGTCGAGAATCCACTTTTCTAAACCCACACAGCCTAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GAAAATGCCTCACACAAGCACGTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCGTGGCCTTCAGAGGGTaGAACAGGGACACAGGACCC +
Preference number: 4 (lower is better)
Translates to: ENASHKHVVSCPVASLETVAFRG*NRDTGP
Trigger: GGGTCCTGTGTCCCTGTTCCACCCTCTGAAGGCCAC...GGTTTCCAAGGAAGCCACAGGGCAGCTGACCACGTGCTTGTGTGAGGCATTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CTCGTGGGAGGAGGACAGCAAATGGCTGCCTTGTTTGCCACCATGACATCCAGTGTGGCCTTCAGAGGGTaGAACAGGGACACAGGACCC +
Preference number: 4 (lower is better)
Translates to: LVGGGQQMAALFATMTSSVAFRG*NRDTGP
Trigger: GGGTCCTGTGTCCCTGTTCCACCCTCTGAAGGCCAC...ACTGGATGTCATGGTGGCAAACAAGGCAGCCATTTGCTGTCCTCCTCCCACGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGCATGCAGGCGTGGCCTTCAGAGGGTaGAACAGGGACACAGGACCC +
Preference number: 4 (lower is better)
Translates to: PVWMIKLIHWNTRLLHAGVAFRG*NRDTGP
Trigger: GGGTCCTGTGTCCCTGTTCCACCCTCTGAAGGCCAC...GCCTGCATGCAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp TCCAGGGAGGACAGAGCTTGCCTGAGTGAGCATTCGCTGACACTGGCGGGCTGCTTGATGCCACTCTCTTaGTTTTGTATGGCCCCGCCA +
Preference number: 4 (lower is better)
Translates to: SREDRACLSEHSLTLAGCLMPLS*FCMAPP
Trigger: TGGCGGGGCCATACAAAACCAAGAGAGTGGCATCAA...GCAGCCCGCCAGTGTCAGCGAATGCTCACTCAGGCAAGCTCTGTCCTCCCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp AGGGAGTCTCCTCGCATAAGCCACAAAGACACGTGGCAAAAAGCTGACATCTTTGCCACGCTCCAGGGGTaGCCTGGCCTCATGGGGTGC +
Preference number: 4 (lower is better)
Translates to: RESPRISHKDTWQKADIFATLQG*PGLMGC
Trigger: GCACCCCATGAGGCCAGGCCACCCCTGGAGCGTGGC...AAAGATGTCAGCTTTTTGCCACGTGTCTTTGTGGCTTATGCGAGGAGACTCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GGGGTAGAAGCCAAGAATCCAACACAGATCATCTGGAATTTCAGAACACGGAGGGCCACGCTCCAGGGGTaGCCTGGCCTCATGGGGTGC +
Preference number: 4 (lower is better)
Translates to: GVEAKNPTQIIWNFRTRRATLQG*PGLMGC
Trigger: GCACCCCATGAGGCCAGGCCACCCCTGGAGCGTGGC...CCTCCGTGTTCTGAAATTCCAGATGATCTGTGTTGGATTCTTGGCTTCTACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp TCTTCACCAAACAAGGGACCTCCCAGCATCTTGTGCACCTTGGACAGTGTCCTGGTTGGCGACGTTGGGTaGCTGCTGAGGGAGGGCTTG +
Preference number: 4 (lower is better)
Translates to: SSPNKGPPSILCTLDSVLVGDVG*LLREGL
Trigger: CAAGCCCTCCCTCAGCAGCCACCCAACGTCGCCAAC...CAGGACACTGTCCAAGGTGCACAAGATGCTGGGAGGTCCCTTGTTTGGTGAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GCTAGGCTGTGTGGGTTTAGAAAAGTGGATTCTCGACCCAACACTGCCTGGGGAAGCTGTTGGCGACGTTaGGTGGCTGCTGAGGGAGGG +
Preference number: 4 (lower is better)
Translates to: ARLCGFRKVDSRPNTAWGSCWRR*VAAEGG
Trigger: CCCTCCCTCAGCAGCCACCCAACGTCGCCAACAGCT...TCCCCAGGCAGTGTTGGGTCGAGAATCCACTTTTCTAAACCCACACAGCCTAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGCATGCAGGCGTCTCCTGGCCAGCTGTTaGCGACGTTGGGTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: RVDDKTHPLEHTPAACRRLLASC*RRWVAA
Trigger: AGCAGCCACCCAACGTCGCCAACAGCTGGCCAGGAG...ACGCCTGCATGCAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GGATTCTCGACCCAACACTGCCTGGGGAAATGGCTGTGGTTCTGCATGGAATGGACACGTAGGAAGTCCTaGAGGAGCGGCCCGAGTTGG +
Preference number: 4 (lower is better)
Translates to: GFSTQHCLGKWLWFCMEWTRRKS*RSGPSW
Trigger: CCAACTCGGGCCGCTCCTCCAGGACTTCCTACGTGT...CCATTCCATGCAGAACCACAGCCATTTCCCCAGGCAGTGTTGGGTCGAGAATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGGCCGGCTGCCCCGTGTaGATGATAAAACTCATCCAC +
Preference number: 4 (lower is better)
Translates to: AGCPVWMIKLIHWNTRLLAGCPV*MIKLIH
Trigger: GTGGATGAGTTTTATCATCCACACGGGGCAGCCGGC...CAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CCCGAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGTTCTGCTCTTCTTGGTaGCCGCTCTCTTCAGCACTG +
Preference number: 4 (lower is better)
Translates to: PEGRLPRVDDKTHPLEHTFCSSW*PLSSAL
Trigger: CAGTGCTGAAGAGAGCGGCCACCAAGAAGAGCAGAA...CGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371355.8
ENST00000371357.5
CDS-3UTR CCA 90 bp GAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTTTAGGGTCTGGTGTGTaGTACGAGACCCAGGAAGGC +
Preference number: 4 (lower is better)
Translates to: EGRLPRVDDKTHPLEHTPLGSGV*YETQEG
Trigger: GCCTTCCTGGGTCTCGTACCACACACCAGACCCTAA...AGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGCTGCGGTTTAGGGTCTaGTGTGTGGTACGAGACCCA +
Preference number: 4 (lower is better)
Translates to: AGCPVWMIKLIHWNTRLLLRFRV*CVVRDP
Trigger: TGGGTCTCGTACCACACACCAGACCCTAAACCGCAG...CAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGTCCAAGCACCCATGCTaGATGCTGAGTCCCAGGACA +
Preference number: 4 (lower is better)
Translates to: AGCPVWMIKLIHWNTRLLSKHPC*MLSPRT
Trigger: TGTCCTGGGACTCAGCATCCAGCATGGGTGCTTGGA...CAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp TCTTCACCAAACAAGGGACCTCCCAGCATCTTGTGCACCTTGGACAGTGTCCTGCTGGGTGTGAGGGCCTaGCGGTCAGGCACTTGGTCA +
Preference number: 4 (lower is better)
Translates to: SSPNKGPPSILCTLDSVLLGVRA*RSGTWS
Trigger: TGACCAAGTGCCTGACCGCCAGGCCCTCACACCCAG...CAGGACACTGTCCAAGGTGCACAAGATGCTGGGAGGTCCCTTGTTTGGTGAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CGGTTTAGGGTCTGGTGTGTGGTACGAGACCCAGGAAGGCAGGACAGGAAGGGGGAGGAGGACAGCAAATaGCTGCCTTGTTTGCCACCA +
Preference number: 4 (lower is better)
Translates to: RFRVWCVVRDPGRQDRKGEEDSK*LPCLPP
Trigger: TGGTGGCAAACAAGGCAGCCATTTGCTGTCCTCCTC...CCCCTTCCTGTCCTGCCTTCCTGGGTCTCGTACCACACACCAGACCCTAAACCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp AGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGTCCAACACAGATCATCTaGAATTTCAGAACACGGAGG +
Preference number: 4 (lower is better)
Translates to: RSRRTFRWALLLCAARPRPTQII*NFRTRR
Trigger: CCTCCGTGTTCTGAAATTCCAGATGATCTGTGTTGG...ACGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CGGTTTAGGGTCTGGTGTGTGGTACGAGACCCAGGAAGGCAGGACAGGAAGGGGCAAGATAACATGGGCTaGGGGCTGGGGAACAAGAGA +
Preference number: 4 (lower is better)
Translates to: RFRVWCVVRDPGRQDRKGQDNMG*GLGNKR
Trigger: TCTCTTGTTCCCCAGCCCCCAGCCCATGTTATCTTG...CCCCTTCCTGTCCTGCCTTCCTGGGTCTCGTACCACACACCAGACCCTAAACCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GCCCGGCCTCAGTGGCAGGAGCCGTGTCCTCCCTCGGTCACTTGCTCTGAGTTTTGGTTCTGCATGGAATaGACACATTCGACACCCAAG +
Preference number: 4 (lower is better)
Translates to: ARPQWQEPCPPSVTCSEFWFCME*THSTPK
Trigger: CTTGGGTGTCGAATGTGTCCATTCCATGCAGAACCA...AAACTCAGAGCAAGTGACCGAGGGAGGACACGGCTCCTGCCACTGAGGCCGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp TGGCGCCAGGACAGTGCTGGGCATCAGGTGCCCGGCCTCAGTGGCAGGAGCCGTGATGCACTTCAAATTTaGCAGCTCACTATGAGATTC +
Preference number: 4 (lower is better)
Translates to: WRQDSAGHQVPGLSGRSRDALQI*QLTMRF
Trigger: GAATCTCATAGTGAGCTGCCAAATTTGAAGTGCATC...ACGGCTCCTGCCACTGAGGCCGGGCACCTGATGCCCAGCACTGTCCTGGCGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCCCTTCCACTCGTGGGAGGAGGCAGCCACTGCTTGACTaGTTCCAGATGCAGACAACT +
Preference number: 4 (lower is better)
Translates to: VVSCPVASLETPSTRGRRQPLLD*FQMQTT
Trigger: AGTTGTCTGCATCTGGAACCAGTCAAGCAGTGGCTG...CCTCCTCCCACGAGTGGAAGGGGTTTCCAAGGAAGCCACAGGGCAGCTGACCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGCAAAGTCGAAGCAGTTaGAGGAGGACCGGAAGTAGC +
Preference number: 4 (lower is better)
Translates to: AGCPVWMIKLIHWNTRLLQSRSS*RRTGSS
Trigger: GCTACTTCCGGTCCTCCTTCAACTGCTTCGACTTTG...CAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTCAAAGTCGAAGCAGTTaGAGGAGGACCGGAAGTAGC +
Preference number: 4 (lower is better)
Translates to: EGRLPRVDDKTHPLEHTPQSRSS*RRTGSS
Trigger: GCTACTTCCGGTCCTCCTTCAACTGCTTCGACTTTG...AGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp CCCGAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGGGGCGAAGACCACAATaGACAGGAAGAGCAAGAAGA +
Preference number: 4 (lower is better)
Translates to: PEGRLPRVDDKTHPLEHTGRRPQ*TGRARR
Trigger: TCTTCTTGCTCTTCCTGTTCATTGTGGTCTTCGCCC...CGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTCGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GCTTGCCTGAGTGAGCATTCGCTGACACTGGCGGGCTGCACAAGCCACGACTGTGGGCGAAGACCACAATaGACAGGAAGAGCAAGAAGA +
Preference number: 4 (lower is better)
Translates to: ACLSEHSLTLAGCTSHDCGRRPQ*TGRARR
Trigger: TCTTCTTGCTCTTCCTGTTCATTGTGGTCTTCGCCC...ACAGTCGTGGCTTGTGCAGCCCGCCAGTGTCAGCGAATGCTCACTCAGGCAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp CCCGAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGTGCGATTCGATCCCGTaGTACATCACTGCATTCCAG +
Preference number: 4 (lower is better)
Translates to: PEGRLPRVDDKTHPLEHTCDSIP*YITAFQ
Trigger: CTGGAATGCAGTGATGTATCACGGGATCGAATCGCA...CGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTCGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GCTTGCCTGAGTGAGCATTCGCTGACACTGGCGGGCTGCACAAGCCACGACTGTTGCGATTCGATCCCGTaGTACATCACTGCATTCCAG +
Preference number: 4 (lower is better)
Translates to: ACLSEHSLTLAGCTSHDCCDSIP*YITAFQ
Trigger: CTGGAATGCAGTGATGTATCACGGGATCGAATCGCA...ACAGTCGTGGCTTGTGCAGCCCGCCAGTGTCAGCGAATGCTCACTCAGGCAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp CCCGAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGTTTCCCTTTGGATCCTaGGAAAGCAAACGCCACCAG +
Preference number: 4 (lower is better)
Translates to: PEGRLPRVDDKTHPLEHTFPFGS*ESKRHQ
Trigger: CTGGTGGCGTTTGCTTTCTCAGGATCCAAAGGGAAA...CGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTCGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GCTTGCCTGAGTGAGCATTCGCTGACACTGGCGGGCTGCACAAGCCACGACTGTTTTCCCTTTGGATCCTaGGAAAGCAAACGCCACCAG +
Preference number: 4 (lower is better)
Translates to: ACLSEHSLTLAGCTSHDCFPFGS*ESKRHQ
Trigger: CTGGTGGCGTTTGCTTTCTCAGGATCCAAAGGGAAA...ACAGTCGTGGCTTGTGCAGCCCGCCAGTGTCAGCGAATGCTCACTCAGGCAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp AGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGTAGACAATCAAGATGTTaGGGACATTCTTCAGGGAGT +
Preference number: 4 (lower is better)
Translates to: RSRRTFRWALLLCAARPRRQSRC*GHSSGS
Trigger: ACTCCCTGAAGAATGTCCTCAACATCTTGATTGTCT...ACGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GCCCGGCCTCAGTGGCAGGAGCCGTGTCCTCCCTCGGTCACTTGCTCTGAGTTTTGGAGAACATGGATGTaGACACGATGTTCAGGCATT +
Preference number: 4 (lower is better)
Translates to: ARPQWQEPCPPSVTCSEFWRTWM*TRCSGI
Trigger: AATGCCTGAACATCGTGTTCACATCCATGTTCTCCA...AAACTCAGAGCAAGTGACCGAGGGAGGACACGGCTCCTGCCACTGAGGCCGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCCCTTCCACTCGTGGGAGGAGGCATTCCAGGCATCTCTaGAATAGTTCAGCACCCCAA +
Preference number: 4 (lower is better)
Translates to: VVSCPVASLETPSTRGRRHSRHL*NSSAPQ
Trigger: TTGGGGTGCTGAACTATTTCAGAGATGCCTGGAATG...CCTCCTCCCACGAGTGGAAGGGGTTTCCAAGGAAGCCACAGGGCAGCTGACCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GCTGCATGCAGGCGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTCTTGGTAGGAGCACAGGAAGATaGAGGAGACGAAGTAGAAGT +
Preference number: 4 (lower is better)
Translates to: AACRRLSGHGAASTSGLGRSTGR*RRRSRS
Trigger: ACTTCTACTTCGTCTCCTTCATCTTCCTGTGCTCCT...ACCAAGACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACGCCTGCATGCAGC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR TCA 90 bp GTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCCCTTCCACTCGTGGGAGGAGGAGGAGCACAGGAAGATaGAGGAGACGAAGTAGAAGT +
Preference number: 4 (lower is better)
Translates to: VVSCPVASLETPSTRGRRRSTGR*RRRSRS
Trigger: ACTTCTACTTCGTCTCCTTCATCTTCCTGTGCTCCT...CCTCCTCCCACGAGTGGAAGGGGTTTCCAAGGAAGCCACAGGGCAGCTGACCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GCTTGCCTGAGTGAGCATTCGCTGACACTGGCGGGCTGCACAAGCCACGACTGTAACTCATCCAAGTGGTaGGGACCTAGGATGGAAGAG +
Preference number: 4 (lower is better)
Translates to: ACLSEHSLTLAGCTSHDCNSSKW*GPRMEE
Trigger: CTCTTCCATCCTAGGTCCTCACCACTTGGATGAGTT...ACAGTCGTGGCTTGTGCAGCCCGCCAGTGTCAGCGAATGCTCACTCAGGCAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp AGGGAGTCTCCTCGCATAAGCCACAAAGACACGTGGCAAAAAGCTGACATCTTTCCAGTGCCGTCCGGATaGGGGCCATCAGCGTGGACG +
Preference number: 4 (lower is better)
Translates to: RESPRISHKDTWQKADIFPVPSG*GPSAWT
Trigger: CGTCCACGCTGATGGCCCTCATCCGGACGGCACTGG...AAAGATGTCAGCTTTTTGCCACGTGTCTTTGTGGCTTATGCGAGGAGACTCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GGGGTAGAAGCCAAGAATCCAACACAGATCATCTGGAATTTCAGAACACGGAGGTGGGGCTGGCATCTGTaGCGGGCTGAGTCTCGGCCG +
Preference number: 4 (lower is better)
Translates to: GVEAKNPTQIIWNFRTRRWGWHL*RAESRP
Trigger: CGGCCGAGACTCAGCCCGTCACAGATGCCAGCCCCA...CCTCCGTGTTCTGAAATTCCAGATGATCTGTGTTGGATTCTTGGCTTCTACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp TCTTCACCAAACAAGGGACCTCCCAGCATCTTGTGCACCTTGGACAGTGTCCTGCAGCCTCCTCGAAAGTaGGAGTGTCCTCAGGCAGGG +
Preference number: 4 (lower is better)
Translates to: SSPNKGPPSILCTLDSVLQPPRK*ECPQAG
Trigger: CCCTGCCTGAGGACACTCTCACTTTCGAGGAGGCTG...CAGGACACTGTCCAAGGTGCACAAGATGCTGGGAGGTCCCTTGTTTGGTGAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp CTCGTGGGAGGAGGACAGCAAATGGCTGCCTTGTTTGCCACCATGACATCCAGTACCCATGCTGGATGCTaGGTCCCAGGACACGGGATT +
Preference number: 4 (lower is better)
Translates to: LVGGGQQMAALFATMTSSTHAGC*VPGHGI
Trigger: AATCCCGTGTCCTGGGACTCAGCATCCAGCATGGGT...ACTGGATGTCATGGTGGCAAACAAGGCAGCCATTTGCTGTCCTCCTCCCACGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GAAAATGCCTCACACAAGCACGTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCACCCATGCTGGATGCTaGGTCCCAGGACACGGGATT +
Preference number: 4 (lower is better)
Translates to: ENASHKHVVSCPVASLETTHAGC*VPGHGI
Trigger: AATCCCGTGTCCTGGGACTCAGCATCCAGCATGGGT...GGTTTCCAAGGAAGCCACAGGGCAGCTGACCACGTGCTTGTGTGAGGCATTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp AGGGAGTCTCCTCGCATAAGCCACAAAGACACGTGGCAAAAAGCTGACATCTTTTGCCGCACGGCCACGTaGAGGGTGCTCCCCACAGGA +
Preference number: 4 (lower is better)
Translates to: RESPRISHKDTWQKADIFCRTAT*RVLPTG
Trigger: TCCTGTGGGGAGCACCCTTCACGTGGCCGTGCGGCA...AAAGATGTCAGCTTTTTGCCACGTGTCTTTGTGGCTTATGCGAGGAGACTCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GGATTCTCGACCCAACACTGCCTGGGGAAATGGCTGTGGTTCTGCATGGAATGGCAGAGCTTGCCTGAGTaGGCATTCGCTGACACTGGC +
Preference number: 4 (lower is better)
Translates to: GFSTQHCLGKWLWFCMEWQSLPE*AFADTG
Trigger: GCCAGTGTCAGCGAATGCTCACTCAGGCAAGCTCTG...CCATTCCATGCAGAACCACAGCCATTTCCCCAGGCAGTGTTGGGTCGAGAATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp CCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGCATGCAGGCTGGTCACAATCATGCTaGACCCCGAGACCAGGCAGC +
Preference number: 4 (lower is better)
Translates to: PVWMIKLIHWNTRLLHAGWSQSC*TPRPGS
Trigger: GCTGCCTGGTCTCGGGGTTCAGCATGATTGTGACCA...GCCTGCATGCAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp CCCGAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGGACTTGAGCACCACCTaGAAACTTGGAATCCCAGAC +
Preference number: 4 (lower is better)
Translates to: PEGRLPRVDDKTHPLEHTDLSTT*KLGIPD
Trigger: GTCTGGGATTCCAAGTTTGCAGGTGGTGCTCAAGTC...CGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTCGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp CGGTTTAGGGTCTGGTGTGTGGTACGAGACCCAGGAAGGCAGGACAGGAAGGGGGACTTGAGCACCACCTaGAAACTTGGAATCCCAGAC +
Preference number: 4 (lower is better)
Translates to: RFRVWCVVRDPGRQDRKGDLSTT*KLGIPD
Trigger: GTCTGGGATTCCAAGTTTGCAGGTGGTGCTCAAGTC...CCCCTTCCTGTCCTGCCTTCCTGGGTCTCGTACCACACACCAGACCCTAAACCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GAAAATGCCTCACACAAGCACGTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCAGGGGACTTCTCCTCTaGATTCCTGTCCTCCTCGGC +
Preference number: 4 (lower is better)
Translates to: ENASHKHVVSCPVASLETRGLLL*IPVLLG
Trigger: GCCGAGGAGGACAGGAATGCAGAGGAGAAGTCCCCT...GGTTTCCAAGGAAGCCACAGGGCAGCTGACCACGTGCTTGTGTGAGGCATTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GTCTTGGTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGCCACCCGAGCTGAGTCCCAGGAAAACAAACTCTaGAAAATACAGGGTCGTGGT +
Preference number: 4 (lower is better)
Translates to: VLVRVVVAVPCSATRAESQENKL*KIQGRG
Trigger: ACCACGACCCTGTATTTTGCAGAGTTTGTTTTCCTG...GGACTCAGCTCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGACCAAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR GCA 90 bp AGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGTCAGGAAAACAAACTCTaGAAAATACAGGGTCGTGGT +
Preference number: 4 (lower is better)
Translates to: RSRRTFRWALLLCAARPRQENKL*KIQGRG
Trigger: ACCACGACCCTGTATTTTGCAGAGTTTGTTTTCCTG...ACGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp TCTTCACCAAACAAGGGACCTCCCAGCATCTTGTGCACCTTGGACAGTGTCCTGTTGGCCGAGTTCTGCTaGCTGGCGGCGATGGAGATG +
Preference number: 4 (lower is better)
Translates to: SSPNKGPPSILCTLDSVLLAEFC*LAAMEM
Trigger: CATCTCCATCGCCGCCAGGCAGCAGAACTCGGCCAA...CAGGACACTGTCCAAGGTGCACAAGATGCTGGGAGGTCCCTTGTTTGGTGAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp TCATGGGGTAGAAGCCAAGAATCCAACACAGATCATCTGGAATTTCAGAACACGAGCTGGCTGGCCCGCTaGTCCCACACCGAGCGCGCC +
Preference number: 4 (lower is better)
Translates to: SWGRSQESNTDHLEFQNTSWLAR*SHTERA
Trigger: GGCGCGCTCGGTGTGGGAGCAGCGGGCCAGCCAGCT...CGTGTTCTGAAATTCCAGATGATCTGTGTTGGATTCTTGGCTTCTACCCCATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GGGGTAGAAGCCAAGAATCCAACACAGATCATCTGGAATTTCAGAACACGGAGGCTGGCCCGCAGGTTCTaGAGCCGTAGCTGGCTGGCC +
Preference number: 4 (lower is better)
Translates to: GVEAKNPTQIIWNFRTRRLARRF*SRSWLA
Trigger: GGCCAGCCAGCTACGGCTGCAGAACCTGCGGGCCAG...CCTCCGTGTTCTGAAATTCCAGATGATCTGTGTTGGATTCTTGGCTTCTACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp AGGGAGTCTCCTCGCATAAGCCACAAAGACACGTGGCAAAAAGCTGACATCTTTCTGGCCCGCAGGTTCTaGAGCCGTAGCTGGCTGGCC +
Preference number: 4 (lower is better)
Translates to: RESPRISHKDTWQKADIFLARRF*SRSWLA
Trigger: GGCCAGCCAGCTACGGCTGCAGAACCTGCGGGCCAG...AAAGATGTCAGCTTTTTGCCACGTGTCTTTGTGGCTTATGCGAGGAGACTCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp TCATGGGGTAGAAGCCAAGAATCCAACACAGATCATCTGGAATTTCAGAACACGCCTCAGGTCGGGCTTTaGCTCCCACGGGCCCCCGCG +
Preference number: 4 (lower is better)
Translates to: SWGRSQESNTDHLEFQNTPQVGL*LPRAPA
Trigger: CGCGGGGGCCCGTGGGAGGCAAAGCCCGACCTGAGG...CGTGTTCTGAAATTCCAGATGATCTGTGTTGGATTCTTGGCTTCTACCCCATGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GGATTCTCGACCCAACACTGCCTGGGGAAATGGCTGTGGTTCTGCATGGAATGGGTGCTGGGCAGTGTGTaGATGGGACCCACAGTCACA +
Preference number: 4 (lower is better)
Translates to: GFSTQHCLGKWLWFCMEWVLGSV*MGPTVT
Trigger: TGTGACTGTGGGTCCCATGCACACACTGCCCAGCAC...CCATTCCATGCAGAACCACAGCCATTTCCCCAGGCAGTGTTGGGTCGAGAATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GTGCAGCTAGCACCAGTGGTCTTGGTCAGGGTGGTGGTAGCTGTGCCGTGCTCGTTCCCTTTGAAGAGCTaGACCGCAATGACGGCAAAT +
Preference number: 4 (lower is better)
Translates to: VQLAPVVLVRVVVAVPCSFPLKS*TAMTAN
Trigger: ATTTGCCGTCATTGCGGTGCAGCTCTTCAAAGGGAA...CGAGCACGGCACAGCTACCACCACCCTGACCAAGACCACTGGTGCTAGCTGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR GCA 90 bp TCCAGGGAGGACAGAGCTTGCCTGAGTGAGCATTCGCTGACACTGGCGGGCTGCTTCCCTTTGAAGAGCTaGACCGCAATGACGGCAAAT +
Preference number: 4 (lower is better)
Translates to: SREDRACLSEHSLTLAGCFPLKS*TAMTAN
Trigger: ATTTGCCGTCATTGCGGTGCAGCTCTTCAAAGGGAA...GCAGCCCGCCAGTGTCAGCGAATGCTCACTCAGGCAAGCTCTGTCCTCCCTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp CTCGTGGGAGGAGGACAGCAAATGGCTGCCTTGTTTGCCACCATGACATCCAGTTCGGTGGCATTGGCCTaGTCATCACAGGCCTGGTTG +
Preference number: 4 (lower is better)
Translates to: LVGGGQQMAALFATMTSSSVALA*SSQAWL
Trigger: CAACCAGGCCTGTGATGAGCAGGCCAATGCCACCGA...ACTGGATGTCATGGTGGCAAACAAGGCAGCCATTTGCTGTCCTCCTCCCACGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp CCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGCATGCAGGCCAGCTTGATCTCCAGTaGCGTCCGGATGAGGGCCAT +
Preference number: 4 (lower is better)
Translates to: PVWMIKLIHWNTRLLHAGQLDLQ*RPDEGH
Trigger: ATGGCCCTCATCCGGACGGCACTGGAGATCAAGCTG...GCCTGCATGCAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GCTGTGCCGTGCTCGGCCACCCGAGCTGAGTCCCAGGGTGCAGTGGTAACCGTTGAATATCATCAGAGCTaGATAAACCTTCCCCACTGT +
Preference number: 4 (lower is better)
Translates to: AVPCSATRAESQGAVVTVEYHQS*INLPHC
Trigger: ACAGTGGGGAAGGTTTATGCAGCTCTGATGATATTC...AACGGTTACCACTGCACCCTGGGACTCAGCTCGGGTGGCCGAGCACGGCACAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR GCA 90 bp AGACTGAAAATGCCTCACACAAGCACGTGGTCAGCTGCCCTGTGGCTTCCTTGGGGCCCCTCCGGGTTATaGTCTGCATCTGAACGTCCA +
Preference number: 4 (lower is better)
Translates to: RLKMPHTSTWSAALWLPWGPSGL*SASERP
Trigger: TGGACGTTCAGATGCAGAGCATAACCCGGAGGGGCC...CCAAGGAAGCCACAGGGCAGCTGACCACGTGCTTGTGTGAGGCATTTTCAGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp CTCGTGGGAGGAGGACAGCAAATGGCTGCCTTGTTTGCCACCATGACATCCAGTGGCCCCTCCGGGTTATaGTCTGCATCTGAACGTCCA +
Preference number: 4 (lower is better)
Translates to: LVGGGQQMAALFATMTSSGPSGL*SASERP
Trigger: TGGACGTTCAGATGCAGAGCATAACCCGGAGGGGCC...ACTGGATGTCATGGTGGCAAACAAGGCAGCCATTTGCTGTCCTCCTCCCACGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp TCTTCACCAAACAAGGGACCTCCCAGCATCTTGTGCACCTTGGACAGTGTCCTGCTGAGGGGGTCTCTCTaGAGCAGGGCGTTGTGTTCG +
Preference number: 4 (lower is better)
Translates to: SSPNKGPPSILCTLDSVLLRGSL*SRALCS
Trigger: CGAACACAACGCCCTGCTGCAGAGAGACCCCCTCAG...CAGGACACTGTCCAAGGTGCACAAGATGCTGGGAGGTCCCTTGTTTGGTGAAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp CCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGCATGCAGGCACTGGAACACACGCCTaGTGCATGCAGGCGTCTGAG +
Preference number: 4 (lower is better)
Translates to: PVWMIKLIHWNTRLLHAGTGTHA*CMQASE
Trigger: CTCAGACGCCTGCATGCAGCAGGCGTGTGTTCCAGT...GCCTGCATGCAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GCTAGGCTGTGTGGGTTTAGAAAAGTGGATTCTCGACCCAACACTGCCTGGGGACTGACACTGGCGGGCTaGACAAGCCACGACTGTGTC +
Preference number: 4 (lower is better)
Translates to: ARLCGFRKVDSRPNTAWGLTLAG*TSHDCV
Trigger: GACACAGTCGTGGCTTGTGCAGCCCGCCAGTGTCAG...TCCCCAGGCAGTGTTGGGTCGAGAATCCACTTTTCTAAACCCACACAGCCTAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGGGCTTGCTACCTGGCTaGCATCGCGAGTACTTTTCA +
Preference number: 4 (lower is better)
Translates to: AGCPVWMIKLIHWNTRLLGLLPG*HREYFS
Trigger: TGAAAAGTACTCGCGATGGCAGCCAGGTAGCAAGCC...CAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCCCTTCCACTCGTGGGAGGAGGCTTCCTACCAGCCTTTaGCTCTCTTCTGCTGTATGT +
Preference number: 4 (lower is better)
Translates to: VVSCPVASLETPSTRGRRLPTSL*LSSAVC
Trigger: ACATACAGCAGAAGAGAGGCAAAGGCTGGTAGGAAG...CCTCCTCCCACGAGTGGAAGGGGTTTCCAAGGAAGCCACAGGGCAGCTGACCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp AGGGAGTCTCCTCGCATAAGCCACAAAGACACGTGGCAAAAAGCTGACATCTTTGGGCTTCCTCCCTCCTaGCCTGACGGCCCCACATCC +
Preference number: 4 (lower is better)
Translates to: RESPRISHKDTWQKADIFGLPPS*PDGPTS
Trigger: GGATGTGGGGCCGTCAGGGCAGGAGGGAGGAAGCCC...AAAGATGTCAGCTTTTTGCCACGTGTCTTTGTGGCTTATGCGAGGAGACTCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp CCACGTGAAGGGTGCTCCCCACAGGACGCAGAGCTCCTCACAACGGCTCCAAGCCACACCACCATCAACTaGTCTAAATGCTCCCTTTCT +
Preference number: 4 (lower is better)
Translates to: PREGCSPQDAELLTTAPSHTTIN*SKCSLS
Trigger: AGAAAGGGAGCATTTAGAGCAGTTGATGGTGGTGTG...GCTTGGAGCCGTTGTGAGGAGCTCTGCGTCCTGTGGGGAGCACCCTTCACGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTCACCTGTACAGGCACTaGATCTCCTGTGACACAGAC +
Preference number: 4 (lower is better)
Translates to: EGRLPRVDDKTHPLEHTPHLYRH*ISCDTD
Trigger: GTCTGTGTCACAGGAGATGCAGTGCCTGTACAGGTG...AGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GCTAGGCTGTGTGGGTTTAGAAAAGTGGATTCTCGACCCAACACTGCCTGGGGAGCCAAAGTTGGGTCCTaGCCAGTACTCCCGGCACTC +
Preference number: 4 (lower is better)
Translates to: ARLCGFRKVDSRPNTAWGAKVGS*PVLPAL
Trigger: GAGTGCCGGGAGTACTGGCCAGGACCCAACTTTGGC...TCCCCAGGCAGTGTTGGGTCGAGAATCCACTTTTCTAAACCCACACAGCCTAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGGTGGGAGTCTCATCCTaGAAGTTGAACTGTCCCCCA +
Preference number: 4 (lower is better)
Translates to: AGCPVWMIKLIHWNTRLLVGVSS*KLNCPP
Trigger: TGGGGGACAGTTCAACTTCCAGGATGAGACTCCCAC...CAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCCCTTCCACTCGTGGGAGGAGGGAGCAAGCTTCTGATTaGCTGCTTCTTCCATCTCCT +
Preference number: 4 (lower is better)
Translates to: VVSCPVASLETPSTRGRREQASD*LLLPSP
Trigger: AGGAGATGGAAGAAGCAGCCAATCAGAAGCTTGCTC...CCTCCTCCCACGAGTGGAAGGGGTTTCCAAGGAAGCCACAGGGCAGCTGACCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GCTAGGCTGTGTGGGTTTAGAAAAGTGGATTCTCGACCCAACACTGCCTGGGGACCGAGTTCTGCTGCCTaGCGGCGATGGAGATGTTCG +
Preference number: 4 (lower is better)
Translates to: ARLCGFRKVDSRPNTAWGPSSAA*RRWRCS
Trigger: CGAACATCTCCATCGCCGCCAGGCAGCAGAACTCGG...TCCCCAGGCAGTGTTGGGTCGAGAATCCACTTTTCTAAACCCACACAGCCTAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGCATGCAGGCTGGGCAGTGTGTGCATaGGACCCACAGTCACAGTCC +
Preference number: 4 (lower is better)
Translates to: PVWMIKLIHWNTRLLHAGWAVCA*DPQSQS
Trigger: GGACTGTGACTGTGGGTCCCATGCACACACTGCCCA...GCCTGCATGCAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GAAAATGCCTCACACAAGCACGTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCTGGGCAGTGTGTGCATaGGACCCACAGTCACAGTCC +
Preference number: 4 (lower is better)
Translates to: ENASHKHVVSCPVASLETWAVCA*DPQSQS
Trigger: GGACTGTGACTGTGGGTCCCATGCACACACTGCCCA...GGTTTCCAAGGAAGCCACAGGGCAGCTGACCACGTGCTTGTGTGAGGCATTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GAAAATGCCTCACACAAGCACGTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCTCAGAGCGTTGTTCCTaGGCGAGTCTGTGCGCACTG +
Preference number: 4 (lower is better)
Translates to: ENASHKHVVSCPVASLETSERCS*ASLCAL
Trigger: CAGTGCGCACAGACTCGCCCAGGAACAACGCTCTGA...GGTTTCCAAGGAAGCCACAGGGCAGCTGACCACGTGCTTGTGTGAGGCATTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGCATGCAGGCTCAGAGCGTTGTTCCTaGGCGAGTCTGTGCGCACTG +
Preference number: 4 (lower is better)
Translates to: PVWMIKLIHWNTRLLHAGSERCS*ASLCAL
Trigger: CAGTGCGCACAGACTCGCCCAGGAACAACGCTCTGA...GCCTGCATGCAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GCTAGGCTGTGTGGGTTTAGAAAAGTGGATTCTCGACCCAACACTGCCTGGGGAGCGGTACCCAGGGCTTaGACCCTGCTCCTCATAGGT +
Preference number: 4 (lower is better)
Translates to: ARLCGFRKVDSRPNTAWGAVPRA*TLLLIG
Trigger: ACCTATGAGGAGCAGGGTCCAAGCCCTGGGTACCGC...TCCCCAGGCAGTGTTGGGTCGAGAATCCACTTTTCTAAACCCACACAGCCTAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGCATGCAGGCGTACAGCAGGATGCGGATaGTGTAGCCCTGGCGGAGCA +
Preference number: 4 (lower is better)
Translates to: RVDDKTHPLEHTPAACRRTAGCG*CSPGGA
Trigger: TGCTCCGCCAGGGCTACACCATCCGCATCCTGCTGT...ACGCCTGCATGCAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CTCGTGGGAGGAGGACAGCAAATGGCTGCCTTGTTTGCCACCATGACATCCAGTTGCTCATCACAGGCCTaGTTGCTCAGGCAGGACAGC +
Preference number: 4 (lower is better)
Translates to: LVGGGQQMAALFATMTSSCSSQA*LLRQDS
Trigger: GCTGTCCTGCCTGAGCAACCAGGCCTGTGATGAGCA...ACTGGATGTCATGGTGGCAAACAAGGCAGCCATTTGCTGTCCTCCTCCCACGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGCATGCAGGCCACACTCGGTGGCATTaGCCTGCTCATCACAGGCCT +
Preference number: 4 (lower is better)
Translates to: PVWMIKLIHWNTRLLHAGHTRWH*PAHHRP
Trigger: AGGCCTGTGATGAGCAGGCCAATGCCACCGAGTGTG...GCCTGCATGCAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CCCGAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGTCTTCTGGGGCAGATTaGCCCACACAACGGAAATCT +
Preference number: 4 (lower is better)
Translates to: PEGRLPRVDDKTHPLEHTSSGAD*PTQRKS
Trigger: AGATTTCCGTTGTGTGGGCCAATCTGCCCCAGAAGA...CGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTCGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CCCGAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGATCTCATCAGGCTTATaGGGTGGTACCAGCAAGTCC +
Preference number: 4 (lower is better)
Translates to: PEGRLPRVDDKTHPLEHTISSGL*GGTSKS
Trigger: GGACTTGCTGGTACCACCCCATAAGCCTGATGAGAT...CGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTCGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GCTTGCCTGAGTGAGCATTCGCTGACACTGGCGGGCTGCACAAGCCACGACTGTATCTCATCAGGCTTATaGGGTGGTACCAGCAAGTCC +
Preference number: 4 (lower is better)
Translates to: ACLSEHSLTLAGCTSHDCISSGL*GGTSKS
Trigger: GGACTTGCTGGTACCACCCCATAAGCCTGATGAGAT...ACAGTCGTGGCTTGTGCAGCCCGCCAGTGTCAGCGAATGCTCACTCAGGCAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GCCCGGCCTCAGTGGCAGGAGCCGTGTCCTCCCTCGGTCACTTGCTCTGAGTTTGCATCTGGTCTCTGGTaGTTTTGTTCTGCTTGTAGA +
Preference number: 4 (lower is better)
Translates to: ARPQWQEPCPPSVTCSEFASGLW*FCSACR
Trigger: TCTACAAGCAGAACAAAACCACCAGAGACCAGATGC...AAACTCAGAGCAAGTGACCGAGGGAGGACACGGCTCCTGCCACTGAGGCCGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGGAGCCTGCTGCATCTaGTCTCTGGTGGTTTTGTTC +
Preference number: 4 (lower is better)
Translates to: EGRLPRVDDKTHPLEHTPGACCI*SLVVLF
Trigger: GAACAAAACCACCAGAGACCAGATGCAGCAGGCTCC...AGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CTCGTGGGAGGAGGACAGCAAATGGCTGCCTTGTTTGCCACCATGACATCCAGTGTGTCTGCTCCAGGGTaGCCTTCAGAGGGTGGAACA +
Preference number: 4 (lower is better)
Translates to: LVGGGQQMAALFATMTSSVSAPG*PSEGGT
Trigger: TGTTCCACCCTCTGAAGGCCACCCTGGAGCAGACAC...ACTGGATGTCATGGTGGCAAACAAGGCAGCCATTTGCTGTCCTCCTCCCACGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CCCGAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGTTGATGCCACTCTCTTaGTTTTGTATGGCCCCGCCA +
Preference number: 4 (lower is better)
Translates to: PEGRLPRVDDKTHPLEHTLMPLS*FCMAPP
Trigger: TGGCGGGGCCATACAAAACCAAGAGAGTGGCATCAA...CGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTCGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp TCATGGGGTAGAAGCCAAGAATCCAACACAGATCATCTGGAATTTCAGAACACGCGCCTGGCTAGGGGGTaGGCGGTCCGGGGTGGTGCT +
Preference number: 4 (lower is better)
Translates to: SWGRSQESNTDHLEFQNTRLARG*AVRGGA
Trigger: AGCACCACCCCGGACCGCCCACCCCCTAGCCAGGCG...CGTGTTCTGAAATTCCAGATGATCTGTGTTGGATTCTTGGCTTCTACCCCATGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp AGACTGAAAATGCCTCACACAAGCACGTGGTCAGCTGCCCTGTGGCTTCCTTGGGCCCTGTGGCTTCCTTaGAAACCCCTTCCACTCGTG +
Preference number: 4 (lower is better)
Translates to: RLKMPHTSTWSAALWLPWALWLP*KPLPLV
Trigger: CACGAGTGGAAGGGGTTTCCAAGGAAGCCACAGGGC...CCAAGGAAGCCACAGGGCAGCTGACCACGTGCTTGTGTGAGGCATTTTCAGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTCAAGATAACATGGGCTaGGGGCTGGGGAACAAGAGA +
Preference number: 4 (lower is better)
Translates to: EGRLPRVDDKTHPLEHTPQDNMG*GLGNKR
Trigger: TCTCTTGTTCCCCAGCCCCCAGCCCATGTTATCTTG...AGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCCCTTCCACTCGTGGGAGGAGGTGGTTCTGCATGGAATaGACACATTCGACACCCAAG +
Preference number: 4 (lower is better)
Translates to: VVSCPVASLETPSTRGRRWFCME*THSTPK
Trigger: CTTGGGTGTCGAATGTGTCCATTCCATGCAGAACCA...CCTCCTCCCACGAGTGGAAGGGGTTTCCAAGGAAGCCACAGGGCAGCTGACCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GCTAGGCTGTGTGGGTTTAGAAAAGTGGATTCTCGACCCAACACTGCCTGGGGATGGCAAGGATCCCTGTaGGGACGACCACGAAGTCCA +
Preference number: 4 (lower is better)
Translates to: ARLCGFRKVDSRPNTAWGWQGSL*GRPRSP
Trigger: TGGACTTCGTGGTCGTCCTCACAGGGATCCTTGCCA...TCCCCAGGCAGTGTTGGGTCGAGAATCCACTTTTCTAAACCCACACAGCCTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp CCTGCTGCATGCAGGCGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTCTTTATTGTCAAAGTTGGTaGTGCCAAAGTTGGGTCCTG +
Preference number: 4 (lower is better)
Translates to: PAACRRLSGHGAASTSGLYCQSW*CQSWVL
Trigger: CAGGACCCAACTTTGGCATCACCAACTTTGACAATA...AAGACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACGCCTGCATGCAGCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR TCA 90 bp GTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCCCTTCCACTCGTGGGAGGAGGTATTGTCAAAGTTGGTaGTGCCAAAGTTGGGTCCTG +
Preference number: 4 (lower is better)
Translates to: VVSCPVASLETPSTRGRRYCQSW*CQSWVL
Trigger: CAGGACCCAACTTTGGCATCACCAACTTTGACAATA...CCTCCTCCCACGAGTGGAAGGGGTTTCCAAGGAAGCCACAGGGCAGCTGACCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGGGGCGAAGACCACAATaGACAGGAAGAGCAAGAAGA +
Preference number: 4 (lower is better)
Translates to: AGCPVWMIKLIHWNTRLLGRRPQ*TGRARR
Trigger: TCTTCTTGCTCTTCCTGTTCATTGTGGTCTTCGCCC...CAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp ACGCCTGCTGCATGCAGGCGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTACAGTGTCAGGACAATaGAGTAAAAGGACGAGAACA +
Preference number: 4 (lower is better)
Translates to: TPAACRRLSGHGAASTSGTVSGQ*SKRTRT
Trigger: TGTTCTCGTCCTTTTACTTCATTGTCCTGACACTGT...ACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACGCCTGCATGCAGCAGGCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR TCA 90 bp GAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTTTTCCCTTTGGATCCTaGGAAAGCAAACGCCACCAG +
Preference number: 4 (lower is better)
Translates to: EGRLPRVDDKTHPLEHTPFPFGS*ESKRHQ
Trigger: CTGGTGGCGTTTGCTTTCTCAGGATCCAAAGGGAAA...AGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GTGCAGCTAGCACCAGTGGTCTTGGTCAGGGTGGTGGTAGCTGTGCCGTGCTCGTGGAGAACATGGATGTaGACACGATGTTCAGGCATT +
Preference number: 4 (lower is better)
Translates to: VQLAPVVLVRVVVAVPCSWRTWM*TRCSGI
Trigger: AATGCCTGAACATCGTGTTCACATCCATGTTCTCCA...CGAGCACGGCACAGCTACCACCACCCTGACCAAGACCACTGGTGCTAGCTGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR TCA 90 bp CTCGTGGGAGGAGGACAGCAAATGGCTGCCTTGTTTGCCACCATGACATCCAGTGCACCCCAAAGGCGATaGTCTTCAGCACGCATTCCA +
Preference number: 4 (lower is better)
Translates to: LVGGGQQMAALFATMTSSAPQRR*SSARIP
Trigger: TGGAATGCGTGCTGAAGATCATCGCCTTTGGGGTGC...ACTGGATGTCATGGTGGCAAACAAGGCAGCCATTTGCTGTCCTCCTCCCACGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp CCCGAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCATTCCAGGCATCTCTaGAATAGTTCAGCACCCCAA +
Preference number: 4 (lower is better)
Translates to: PEGRLPRVDDKTHPLEHTHSRHL*NSSAPQ
Trigger: TTGGGGTGCTGAACTATTTCAGAGATGCCTGGAATG...CGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTCGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp ACGCCTGCTGCATGCAGGCGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTTACTTCCCAACACAGTaGCAAAGTCAAAGACATTCC +
Preference number: 4 (lower is better)
Translates to: TPAACRRLSGHGAASTSGYFPTQ*QSQRHS
Trigger: GGAATGTCTTTGACTTTGTCACTGTGTTGGGAAGTA...ACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACGCCTGCATGCAGCAGGCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR TCA 90 bp GCTTGCCTGAGTGAGCATTCGCTGACACTGGCGGGCTGCACAAGCCACGACTGTAGGAGCACAGGAAGATaGAGGAGACGAAGTAGAAGT +
Preference number: 4 (lower is better)
Translates to: ACLSEHSLTLAGCTSHDCRSTGR*RRRSRS
Trigger: ACTTCTACTTCGTCTCCTTCATCTTCCTGTGCTCCT...ACAGTCGTGGCTTGTGCAGCCCGCCAGTGTCAGCGAATGCTCACTCAGGCAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTAACTCATCCAAGTGGTaGGGACCTAGGATGGAAGAG +
Preference number: 4 (lower is better)
Translates to: EGRLPRVDDKTHPLEHTPNSSKW*GPRMEE
Trigger: CTCTTCCATCCTAGGTCCTCACCACTTGGATGAGTT...AGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp CCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGCATGCAGGCACATGTCATTGTAACTaGTGCGCCCACACGCAGCCG +
Preference number: 4 (lower is better)
Translates to: PVWMIKLIHWNTRLLHAGTCHCN*CAHTQP
Trigger: CGGCTGCGTGTGGGCGCATCAGTTACAATGACATGT...GCCTGCATGCAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GAAAATGCCTCACACAAGCACGTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCAACTCCGCGTCACACTaGTGCTGCTTTGTCCCAGCT +
Preference number: 4 (lower is better)
Translates to: ENASHKHVVSCPVASLETNSASH*CCFVPA
Trigger: AGCTGGGACAAAGCAGCATCAGTGTGACGCGGAGTT...GGTTTCCAAGGAAGCCACAGGGCAGCTGACCACGTGCTTGTGTGAGGCATTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp CGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGCATGCAGGCGTGGCGAAGTGGATGGGTaGGGAGTTGGCCGTCTTGTA +
Preference number: 4 (lower is better)
Translates to: RVDDKTHPLEHTPAACRRGEVDG*GVGRLV
Trigger: TACAAGACGGCCAACTCCTCACCCATCCACTTCGCC...ACGCCTGCATGCAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GCTAGGCTGTGTGGGTTTAGAAAAGTGGATTCTCGACCCAACACTGCCTGGGGAGGCGAAGTGGATGGGTaGGGAGTTGGCCGTCTTGTA +
Preference number: 4 (lower is better)
Translates to: ARLCGFRKVDSRPNTAWGGEVDG*GVGRLV
Trigger: TACAAGACGGCCAACTCCTCACCCATCCACTTCGCC...TCCCCAGGCAGTGTTGGGTCGAGAATCCACTTTTCTAAACCCACACAGCCTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GCTAGGCTGTGTGGGTTTAGAAAAGTGGATTCTCGACCCAACACTGCCTGGGGAACCCATGCTGGATGCTaGGTCCCAGGACACGGGATT +
Preference number: 4 (lower is better)
Translates to: ARLCGFRKVDSRPNTAWGTHAGC*VPGHGI
Trigger: AATCCCGTGTCCTGGGACTCAGCATCCAGCATGGGT...TCCCCAGGCAGTGTTGGGTCGAGAATCCACTTTTCTAAACCCACACAGCCTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GCTAGGCTGTGTGGGTTTAGAAAAGTGGATTCTCGACCCAACACTGCCTGGGGACAGAGCTTGCCTGAGTaGGCATTCGCTGACACTGGC +
Preference number: 4 (lower is better)
Translates to: ARLCGFRKVDSRPNTAWGQSLPE*AFADTG
Trigger: GCCAGTGTCAGCGAATGCTCACTCAGGCAAGCTCTG...TCCCCAGGCAGTGTTGGGTCGAGAATCCACTTTTCTAAACCCACACAGCCTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp CCACGTGAAGGGTGCTCCCCACAGGACGCAGAGCTCCTCACAACGGCTCCAAGCCACACACAATTTCTTTaGGGAGAATCATGGGGTAGA +
Preference number: 4 (lower is better)
Translates to: PREGCSPQDAELLTTAPSHTQFL*GESWGR
Trigger: TCTACCCCATGATTCTCCTCAAAGAAATTGTGTGTG...GCTTGGAGCCGTTGTGAGGAGCTCTGCGTCCTGTGGGGAGCACCCTTCACGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTATGACATCCACACACTaGACACACCTGTACAGGCAC +
Preference number: 4 (lower is better)
Translates to: EGRLPRVDDKTHPLEHTPMTSTH*THLYRH
Trigger: GTGCCTGTACAGGTGTGTTCAGTGTGTGGATGTCAT...AGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GCTAGGCTGTGTGGGTTTAGAAAAGTGGATTCTCGACCCAACACTGCCTGGGGATGGTCACAATCATGCTaGACCCCGAGACCAGGCAGC +
Preference number: 4 (lower is better)
Translates to: ARLCGFRKVDSRPNTAWGWSQSC*TPRPGS
Trigger: GCTGCCTGGTCTCGGGGTTCAGCATGATTGTGACCA...TCCCCAGGCAGTGTTGGGTCGAGAATCCACTTTTCTAAACCCACACAGCCTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GAAAATGCCTCACACAAGCACGTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCGCAACAGGAGCACAGTaGTCACATGCACAGTCCGAG +
Preference number: 4 (lower is better)
Translates to: ENASHKHVVSCPVASLETATGAQ*SHAQSE
Trigger: CTCGGACTGTGCATGTGATCACTGTGCTCCTGTTGC...GGTTTCCAAGGAAGCCACAGGGCAGCTGACCACGTGCTTGTGTGAGGCATTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GCCCGGCCTCAGTGGCAGGAGCCGTGTCCTCCCTCGGTCACTTGCTCTGAGTTTTTTGGCAGCTCACTATaGGATTCAGGGGACATATAT +
Preference number: 4 (lower is better)
Translates to: ARPQWQEPCPPSVTCSEFFGSSL*DSGDIY
Trigger: ATATATGTCCCCTGAATCTCATAGTGAGCTGCCAAA...AAACTCAGAGCAAGTGACCGAGGGAGGACACGGCTCCTGCCACTGAGGCCGGGC
56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp AGGGAGTCTCCTCGCATAAGCCACAAAGACACGTGGCAAAAAGCTGACATCTTTGGGCTGGGGCCTCCTTaGCACAGGGGAAGTCACCCA +
Preference number: 4 (lower is better)
Translates to: RESPRISHKDTWQKADIFGLGPP*HRGSHP
Trigger: TGGGTGACTTCCCCTGTGGCAAGGAGGCCCCAGCCC...AAAGATGTCAGCTTTTTGCCACGTGTCTTTGTGGCTTATGCGAGGAGACTCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp CCACGTGAAGGGTGCTCCCCACAGGACGCAGAGCTCCTCACAACGGCTCCAAGCCAGGAAAACAAACTCTaGAAAATACAGGGTCGTGGT +
Preference number: 4 (lower is better)
Translates to: PREGCSPQDAELLTTAPSQENKL*KIQGRG
Trigger: ACCACGACCCTGTATTTTGCAGAGTTTGTTTTCCTG...GCTTGGAGCCGTTGTGAGGAGCTCTGCGTCCTGTGGGGAGCACCCTTCACGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp CGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGCATGCAGGCGTCCTTCTGGAGACAGGTaGTGGGCAGTGTGTGCATGG +
Preference number: 4 (lower is better)
Translates to: RVDDKTHPLEHTPAACRRPSGDR*WAVCAW
Trigger: CCATGCACACACTGCCCAGCACCTGTCTCCAGAAGG...ACGCCTGCATGCAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp TCTTCACCAAACAAGGGACCTCCCAGCATCTTGTGCACCTTGGACAGTGTCCTGCCTTCTGGAGACAGGTaGTGGGCAGTGTGTGCATGG +
Preference number: 4 (lower is better)
Translates to: SSPNKGPPSILCTLDSVLPSGDR*WAVCAW
Trigger: CCATGCACACACTGCCCAGCACCTGTCTCCAGAAGG...CAGGACACTGTCCAAGGTGCACAAGATGCTGGGAGGTCCCTTGTTTGGTGAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp CCCGAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGTTCCCTTTGAAGAGCTaGACCGCAATGACGGCAAAT +
Preference number: 4 (lower is better)
Translates to: PEGRLPRVDDKTHPLEHTFPLKS*TAMTAN
Trigger: ATTTGCCGTCATTGCGGTGCAGCTCTTCAAAGGGAA...CGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTCGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GCACCAGTGGTCTTGGTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGCCACCCGACCTTGGATTCATCTGTaGAGTAGAAAAACTTCCCTT +
Preference number: 4 (lower is better)
Translates to: APVVLVRVVVAVPCSATRPWIHL*SRKTSL
Trigger: AAGGGAAGTTTTTCTACTGCACAGATGAATCCAAGG...TCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGACCAAGACCACTGGTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR GCA 90 bp GGATTCTCGACCCAACACTGCCTGGGGAAATGGCTGTGGTTCTGCATGGAATGGCCAAATACTGACCCCTaGAGTCCCTCTCCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: GFSTQHCLGKWLWFCMEWPNTDP*SPSPAP
Trigger: AGGAGCTGGAGAGGGACTGCAGGGGTCAGTATTTGG...CCATTCCATGCAGAACCACAGCCATTTCCCCAGGCAGTGTTGGGTCGAGAATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GCTAGGCTGTGTGGGTTTAGAAAAGTGGATTCTCGACCCAACACTGCCTGGGGAAGATGGACAGCTCCATaGGGTACCCAGGGCTTGGAC +
Preference number: 4 (lower is better)
Translates to: ARLCGFRKVDSRPNTAWGRWTAP*GTQGLD
Trigger: GTCCAAGCCCTGGGTACCGCATGGAGCTGTCCATCT...TCCCCAGGCAGTGTTGGGTCGAGAATCCACTTTTCTAAACCCACACAGCCTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTAGATGGGCATGTTCATaGGAACCAGGCGCTTGTAAG +
Preference number: 4 (lower is better)
Translates to: EGRLPRVDDKTHPLEHTPRWACS*EPGACK
Trigger: CTTACAAGCGCCTGGTTCGCATGAACATGCCCATCT...AGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp CGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGCATGCAGGCGTGGCCCCTCCGGGTTATaGTCTGCATCTGAACGTCCA +
Preference number: 4 (lower is better)
Translates to: RVDDKTHPLEHTPAACRRGPSGL*SASERP
Trigger: TGGACGTTCAGATGCAGAGCATAACCCGGAGGGGCC...ACGCCTGCATGCAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GCTAGGCTGTGTGGGTTTAGAAAAGTGGATTCTCGACCCAACACTGCCTGGGGAGGCCCCTCCGGGTTATaGTCTGCATCTGAACGTCCA +
Preference number: 4 (lower is better)
Translates to: ARLCGFRKVDSRPNTAWGGPSGL*SASERP
Trigger: TGGACGTTCAGATGCAGAGCATAACCCGGAGGGGCC...TCCCCAGGCAGTGTTGGGTCGAGAATCCACTTTTCTAAACCCACACAGCCTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp AGGGAGTCTCCTCGCATAAGCCACAAAGACACGTGGCAAAAAGCTGACATCTTTCGGCCACGTGAAGGGTaGTCCCCACAGGACGCAGAG +
Preference number: 4 (lower is better)
Translates to: RESPRISHKDTWQKADIFRPREG*SPQDAE
Trigger: CTCTGCGTCCTGTGGGGAGCACCCTTCACGTGGCCG...AAAGATGTCAGCTTTTTGCCACGTGTCTTTGTGGCTTATGCGAGGAGACTCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp CTCGTGGGAGGAGGACAGCAAATGGCTGCCTTGTTTGCCACCATGACATCCAGTCTTTTCACAGCATCCTaGGGTGATGGATCCCGAGGC +
Preference number: 4 (lower is better)
Translates to: LVGGGQQMAALFATMTSSLFTAS*GDGSRG
Trigger: GCCTCGGGATCCATCACCGCAGGATGCTGTGAAAAG...ACTGGATGTCATGGTGGCAAACAAGGCAGCCATTTGCTGTCCTCCTCCCACGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp CTCGTGGGAGGAGGACAGCAAATGGCTGCCTTGTTTGCCACCATGACATCCAGTCACCATGACATCCAGTaGTCTCCACTGGCAAGGGCT +
Preference number: 4 (lower is better)
Translates to: LVGGGQQMAALFATMTSSHHDIQ*SPLARA
Trigger: AGCCCTTGCCAGTGGAGAGCACTGGATGTCATGGTG...ACTGGATGTCATGGTGGCAAACAAGGCAGCCATTTGCTGTCCTCCTCCCACGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp TCCAGGGAGGACAGAGCTTGCCTGAGTGAGCATTCGCTGACACTGGCGGGCTGCACATACCACAGAGTGTaGCCTGAGAATCATATGCAG +
Preference number: 4 (lower is better)
Translates to: SREDRACLSEHSLTLAGCTYHRV*PENHMQ
Trigger: CTGCATATGATTCTCAGGGCACACTCTGTGGTATGT...GCAGCCCGCCAGTGTCAGCGAATGCTCACTCAGGCAAGCTCTGTCCTCCCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GCTTGCCTGAGTGAGCATTCGCTGACACTGGCGGGCTGCACAAGCCACGACTGTCTTCCTACCAGCCTTTaGCTCTCTTCTGCTGTATGT +
Preference number: 4 (lower is better)
Translates to: ACLSEHSLTLAGCTSHDCLPTSL*LSSAVC
Trigger: ACATACAGCAGAAGAGAGGCAAAGGCTGGTAGGAAG...ACAGTCGTGGCTTGTGCAGCCCGCCAGTGTCAGCGAATGCTCACTCAGGCAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GAAAATGCCTCACACAAGCACGTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCCCTCCCAGCATCTTGTaGACCTTGGACAGTGTCCTG +
Preference number: 4 (lower is better)
Translates to: ENASHKHVVSCPVASLETPPSIL*TLDSVL
Trigger: CAGGACACTGTCCAAGGTGCACAAGATGCTGGGAGG...GGTTTCCAAGGAAGCCACAGGGCAGCTGACCACGTGCTTGTGTGAGGCATTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTAGCACAGTGATCACATaGACAGTCCGAGATTCCTGG +
Preference number: 4 (lower is better)
Translates to: EGRLPRVDDKTHPLEHTPSTVIT*TVRDSW
Trigger: CCAGGAATCTCGGACTGTGCATGTGATCACTGTGCT...AGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGGATCATATACTCGAATaGAGGCCACTCGGTGATGCG +
Preference number: 4 (lower is better)
Translates to: AGCPVWMIKLIHWNTRLLDHILE*RPLGDA
Trigger: CGCATCACCGAGTGGCCTCCATTCGAGTATATGATC...CAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGCATGCAGGCCCGCATCTGTGCTGTTaGGGAAACAGGCCTTGTGGA +
Preference number: 4 (lower is better)
Translates to: PVWMIKLIHWNTRLLHAGPHLCC*GNRPCG
Trigger: TCCACAAGGCCTGTTTCCCCAACAGCACAGATGCGG...GCCTGCATGCAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GGATTCTCGACCCAACACTGCCTGGGGAAATGGCTGTGGTTCTGCATGGAATGGACCGGAAGTAGCTTCTaGGCCCCAGGCCATACATCT +
Preference number: 4 (lower is better)
Translates to: GFSTQHCLGKWLWFCMEWTGSSF*APGHTS
Trigger: AGATGTATGGCCTGGGGCCCAGAAGCTACTTCCGGT...CCATTCCATGCAGAACCACAGCCATTTCCCCAGGCAGTGTTGGGTCGAGAATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGGAAGGTGTCGAAGTTaGTTGTGGGAGTCTCATCCT +
Preference number: 4 (lower is better)
Translates to: EGRLPRVDDKTHPLEHTPGRCRS*LWESHP
Trigger: AGGATGAGACTCCCACAACCAACTTCGACACCTTCC...AGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CCCGAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGGAGCAAGCTTCTGATTaGCTGCTTCTTCCATCTCCT +
Preference number: 4 (lower is better)
Translates to: PEGRLPRVDDKTHPLEHTEQASD*LLLPSP
Trigger: AGGAGATGGAAGAAGCAGCCAATCAGAAGCTTGCTC...CGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTCGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GCTTGCCTGAGTGAGCATTCGCTGACACTGGCGGGCTGCACAAGCCACGACTGTGAGCAAGCTTCTGATTaGCTGCTTCTTCCATCTCCT +
Preference number: 4 (lower is better)
Translates to: ACLSEHSLTLAGCTSHDCEQASD*LLLPSP
Trigger: AGGAGATGGAAGAAGCAGCCAATCAGAAGCTTGCTC...ACAGTCGTGGCTTGTGCAGCCCGCCAGTGTCAGCGAATGCTCACTCAGGCAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CCCGAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCTTCAGCCACTTCTTTaGCCTTTTGCAGAGCAAGCT +
Preference number: 4 (lower is better)
Translates to: PEGRLPRVDDKTHPLEHTLQPLL*PFAEQA
Trigger: AGCTTGCTCTGCAAAAGGCCAAAGAAGTGGCTGAAG...CGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTCGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp ACACACACACACACACACACATCACACACAATTTCTTTGAGGAGAATCATGGGGGCAGCCGTAGCTGGCTaGCCCGCTGCTCCCACACCG +
Preference number: 4 (lower is better)
Translates to: THTHTHTSHTISLRRIMGAAVAG*PAAPTP
Trigger: CGGTGTGGGAGCAGCGGGCCAGCCAGCTACGGCTGC...CCCCATGATTCTCCTCAAAGAAATTGTGTGTGATGTGTGTGTGTGTGTGTGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGCATGCAGGCGTTCTGGAGACAGGTGCTaGGCAGTGTGTGCATGGGAC +
Preference number: 4 (lower is better)
Translates to: RVDDKTHPLEHTPAACRRSGDRC*AVCAWD
Trigger: GTCCCATGCACACACTGCCCAGCACCTGTCTCCAGA...ACGCCTGCATGCAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CTCGTGGGAGGAGGACAGCAAATGGCTGCCTTGTTTGCCACCATGACATCCAGTTGTTCCTCCACCTTCTaGAGACAGGTGCTGGGCAGT +
Preference number: 4 (lower is better)
Translates to: LVGGGQQMAALFATMTSSCSSTF*RQVLGS
Trigger: ACTGCCCAGCACCTGTCTCCAGAAGGTGGAGGAACA...ACTGGATGTCATGGTGGCAAACAAGGCAGCCATTTGCTGTCCTCCTCCCACGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGCATGCAGGCGTAATAGTGTTCGGGTCTaGGGGCTGACTGCCCATGCG +
Preference number: 4 (lower is better)
Translates to: RVDDKTHPLEHTPAACRRNSVRV*GLTAHA
Trigger: CGCATGGGCAGTCAGCCCCCAGACCCGAACACTATT...ACGCCTGCATGCAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GTGCAGCTAGCACCAGTGGTCTTGGTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGCCCGTCAGCATCACTaGGATATGTACAATAGTGTT +
Preference number: 4 (lower is better)
Translates to: VQLAPVVLVRVVVAVPCSARQHH*DMYNSV
Trigger: AACACTATTGTACATATCCCAGTGATGCTGACGGGC...CGAGCACGGCACAGCTACCACCACCCTGACCAAGACCACTGGTGCTAGCTGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp AGGGAGTCTCCTCGCATAAGCCACAAAGACACGTGGCAAAAAGCTGACATCTTTCACTGGGAACGACCGTaGCTTCCCCAAGAGGGCCCG +
Preference number: 4 (lower is better)
Translates to: RESPRISHKDTWQKADIFHWERP*LPQEGP
Trigger: CGGGCCCTCTTGGGGAAGCCACGGTCGTTCCCAGTG...AAAGATGTCAGCTTTTTGCCACGTGTCTTTGTGGCTTATGCGAGGAGACTCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGCATGCAGGCAACGACTGCCGGTTTTaGGGCATGTACCGTGTCAGG +
Preference number: 4 (lower is better)
Translates to: PVWMIKLIHWNTRLLHAGNDCRF*GMYRVR
Trigger: CCTGACACGGTACATGCCCCAAAACCGGCAGTCGTT...GCCTGCATGCAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GCTAGGCTGTGTGGGTTTAGAAAAGTGGATTCTCGACCCAACACTGCCTGGGGACTGCTTTGTCCCAGCTaGGGCCAGCTTGATCTCCAG +
Preference number: 4 (lower is better)
Translates to: ARLCGFRKVDSRPNTAWGLLCPS*GQLDLQ
Trigger: CTGGAGATCAAGCTGGCCCCAGCTGGGACAAAGCAG...TCCCCAGGCAGTGTTGGGTCGAGAATCCACTTTTCTAAACCCACACAGCCTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CCCGAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGATCAGGCTTATGGGGTaGTACCAGCAAGTCCAAAGT +
Preference number: 4 (lower is better)
Translates to: PEGRLPRVDDKTHPLEHTIRLMG*YQQVQS
Trigger: ACTTTGGACTTGCTGGTACCACCCCATAAGCCTGAT...CGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTCGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGATCTCATCAGGCTTATaGGGTGGTACCAGCAAGTCC +
Preference number: 4 (lower is better)
Translates to: AGCPVWMIKLIHWNTRLLISSGL*GGTSKS
Trigger: GGACTTGCTGGTACCACCCCATAAGCCTGATGAGAT...CAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GCGGTCACGGTGCAGCTAGCACCAGTGGTCTTGGTCAGGGTGGTGGTAGCTGTGGCATCTGGTCTCTGGTaGTTTTGTTCTGCTTGTAGA +
Preference number: 4 (lower is better)
Translates to: AVTVQLAPVVLVRVVVAVASGLW*FCSACR
Trigger: TCTACAAGCAGAACAAAACCACCAGAGACCAGATGC...CACAGCTACCACCACCCTGACCAAGACCACTGGTGCTAGCTGCACCGTGACCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp CCCGAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGGCTGCATCTGGTCTCTaGTGGTTTTGTTCTGCTTGT +
Preference number: 4 (lower is better)
Translates to: PEGRLPRVDDKTHPLEHTAASGL*WFCSAC
Trigger: ACAAGCAGAACAAAACCACCAGAGACCAGATGCAGC...CGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTCGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CGGTTTAGGGTCTGGTGTGTGGTACGAGACCCAGGAAGGCAGGACAGGAAGGGGGCTGCATCTGGTCTCTaGTGGTTTTGTTCTGCTTGT +
Preference number: 4 (lower is better)
Translates to: RFRVWCVVRDPGRQDRKGAASGL*WFCSAC
Trigger: ACAAGCAGAACAAAACCACCAGAGACCAGATGCAGC...CCCCTTCCTGTCCTGCCTTCCTGGGTCTCGTACCACACACCAGACCCTAAACCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTTTGATGCCACTCTCTTaGTTTTGTATGGCCCCGCCA +
Preference number: 4 (lower is better)
Translates to: EGRLPRVDDKTHPLEHTPLMPLS*FCMAPP
Trigger: TGGCGGGGCCATACAAAACCAAGAGAGTGGCATCAA...AGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GGGGTAGAAGCCAAGAATCCAACACAGATCATCTGGAATTTCAGAACACGGAGGGCTCCAGGGGTGGCCTaGCCTCATGGGGTGCATCCT +
Preference number: 4 (lower is better)
Translates to: GVEAKNPTQIIWNFRTRRAPGVA*PHGVHP
Trigger: AGGATGCACCCCATGAGGCCAGGCCACCCCTGGAGC...CCTCCGTGTTCTGAAATTCCAGATGATCTGTGTTGGATTCTTGGCTTCTACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GGGGTAGAAGCCAAGAATCCAACACAGATCATCTGGAATTTCAGAACACGGAGGCAGCGGTGGTGGTGGTaGTGCGACGACGCCTGGCTA +
Preference number: 4 (lower is better)
Translates to: GVEAKNPTQIIWNFRTRRQRWWW*CDDAWL
Trigger: TAGCCAGGCGTCGTCGCACCACCACCACCACCGCTG...CCTCCGTGTTCTGAAATTCCAGATGATCTGTGTTGGATTCTTGGCTTCTACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp TCATGGGGTAGAAGCCAAGAATCCAACACAGATCATCTGGAATTTCAGAACACGCGGTGGCAGCGGTGGTaGTGGTGGTGCGACGACGCC +
Preference number: 4 (lower is better)
Translates to: SWGRSQESNTDHLEFQNTRWQRW*WWCDDA
Trigger: GGCGTCGTCGCACCACCACCACCACCGCTGCCACCG...CGTGTTCTGAAATTCCAGATGATCTGTGTTGGATTCTTGGCTTCTACCCCATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGCATGCAGGCCTGCGGTTTAGGGTCTaGTGTGTGGTACGAGACCCA +
Preference number: 4 (lower is better)
Translates to: PVWMIKLIHWNTRLLHAGLRFRV*CVVRDP
Trigger: TGGGTCTCGTACCACACACCAGACCCTAAACCGCAG...GCCTGCATGCAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp AGACTGAAAATGCCTCACACAAGCACGTGGTCAGCTGCCCTGTGGCTTCCTTGGCGGGATTTGGACTCCTaGGTCCTTCTCAGCCACACA +
Preference number: 4 (lower is better)
Translates to: RLKMPHTSTWSAALWLPWRDLDS*VLLSHT
Trigger: TGTGTGGCTGAGAAGGACCCAGGAGTCCAAATCCCG...CCAAGGAAGCCACAGGGCAGCTGACCACGTGCTTGTGTGAGGCATTTTCAGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGCATGCAGGCCGGGATTTGGACTCCTaGGTCCTTCTCAGCCACACA +
Preference number: 4 (lower is better)
Translates to: PVWMIKLIHWNTRLLHAGRDLDS*VLLSHT
Trigger: TGTGTGGCTGAGAAGGACCCAGGAGTCCAAATCCCG...GCCTGCATGCAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CTCGTGGGAGGAGGACAGCAAATGGCTGCCTTGTTTGCCACCATGACATCCAGTCGGGATTTGGACTCCTaGGTCCTTCTCAGCCACACA +
Preference number: 4 (lower is better)
Translates to: LVGGGQQMAALFATMTSSRDLDS*VLLSHT
Trigger: TGTGTGGCTGAGAAGGACCCAGGAGTCCAAATCCCG...ACTGGATGTCATGGTGGCAAACAAGGCAGCCATTTGCTGTCCTCCTCCCACGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGCATGCAGGCCCAGGACACGGGATTTaGACTCCTGGGTCCTTCTCA +
Preference number: 4 (lower is better)
Translates to: PVWMIKLIHWNTRLLHAGPGHGI*TPGSFS
Trigger: TGAGAAGGACCCAGGAGTCCAAATCCCGTGTCCTGG...GCCTGCATGCAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CTCGTGGGAGGAGGACAGCAAATGGCTGCCTTGTTTGCCACCATGACATCCAGTCCAGGACACGGGATTTaGACTCCTGGGTCCTTCTCA +
Preference number: 4 (lower is better)
Translates to: LVGGGQQMAALFATMTSSPGHGI*TPGSFS
Trigger: TGAGAAGGACCCAGGAGTCCAAATCCCGTGTCCTGG...ACTGGATGTCATGGTGGCAAACAAGGCAGCCATTTGCTGTCCTCCTCCCACGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GGATTCTCGACCCAACACTGCCTGGGGAAATGGCTGTGGTTCTGCATGGAATGGTGGTCAGCTGCCCTGTaGCTTCCTTGGAAACCCCTT +
Preference number: 4 (lower is better)
Translates to: GFSTQHCLGKWLWFCMEWWSAAL*LPWKPL
Trigger: AAGGGGTTTCCAAGGAAGCCACAGGGCAGCTGACCA...CCATTCCATGCAGAACCACAGCCATTTCCCCAGGCAGTGTTGGGTCGAGAATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CTCGTGGGAGGAGGACAGCAAATGGCTGCCTTGTTTGCCACCATGACATCCAGTTGGTCAGCTGCCCTGTaGCTTCCTTGGAAACCCCTT +
Preference number: 4 (lower is better)
Translates to: LVGGGQQMAALFATMTSSWSAAL*LPWKPL
Trigger: AAGGGGTTTCCAAGGAAGCCACAGGGCAGCTGACCA...ACTGGATGTCATGGTGGCAAACAAGGCAGCCATTTGCTGTCCTCCTCCCACGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp TCTTCACCAAACAAGGGACCTCCCAGCATCTTGTGCACCTTGGACAGTGTCCTGCCTCACACAAGCACGTaGTCAGCTGCCCTGTGGCTT +
Preference number: 4 (lower is better)
Translates to: SSPNKGPPSILCTLDSVLPHTST*SAALWL
Trigger: AAGCCACAGGGCAGCTGACCACGTGCTTGTGTGAGG...CAGGACACTGTCCAAGGTGCACAAGATGCTGGGAGGTCCCTTGTTTGGTGAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GGGGTAGAAGCCAAGAATCCAACACAGATCATCTGGAATTTCAGAACACGGAGGCCTGCTCCCTGTGTCTaGCGCCAGGACAGTGCTGGG +
Preference number: 4 (lower is better)
Translates to: GVEAKNPTQIIWNFRTRRPAPCV*RQDSAG
Trigger: CCCAGCACTGTCCTGGCGCCAGACACAGGGAGCAGG...CCTCCGTGTTCTGAAATTCCAGATGATCTGTGTTGGATTCTTGGCTTCTACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GGATTCTCGACCCAACACTGCCTGGGGAAATGGCTGTGGTTCTGCATGGAATGGACACCCAAGATAACATaGGCTGGGGGCTGGGGAACA +
Preference number: 4 (lower is better)
Translates to: GFSTQHCLGKWLWFCMEWTPKIT*AGGWGT
Trigger: TGTTCCCCAGCCCCCAGCCCATGTTATCTTGGGTGT...CCATTCCATGCAGAACCACAGCCATTTCCCCAGGCAGTGTTGGGTCGAGAATCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp AGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGTGATGCACTTCAAATTTaGCAGCTCACTATGAGATTC +
Preference number: 4 (lower is better)
Translates to: RSRRTFRWALLLCAARPRDALQI*QLTMRF
Trigger: GAATCTCATAGTGAGCTGCCAAATTTGAAGTGCATC...ACGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CCCCTCCGTCCCGAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCGCAGAATCCAAAGTTTaGCTGATAAATATGACTCAG +
Preference number: 4 (lower is better)
Translates to: PLRPEVSAHFQVGPASLCAESKV*LINMTQ
Trigger: CTGAGTCATATTTATCAGCCAAACTTTGGATTCTGC...GCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTCGGGACGGAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp CGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGCATGCAGGCGTCTTCCTCCGGAAGTATaGCGAGCTCTCTGTCTTCCC +
Preference number: 4 (lower is better)
Translates to: RVDDKTHPLEHTPAACRRLPPEV*RALCLP
Trigger: GGGAAGACAGAGAGCTCGTCATACTTCCGGAGGAAG...ACGCCTGCATGCAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp AGGGAGTCTCCTCGCATAAGCCACAAAGACACGTGGCAAAAAGCTGACATCTTTAGGAGCTTCCCGGCTTaGTGGCCGCCCAGACCACTT +
Preference number: 4 (lower is better)
Translates to: RESPRISHKDTWQKADIFRSFPA*WPPRPL
Trigger: AAGTGGTCTGGGCGGCCATCAAGCCGGGAAGCTCCT...AAAGATGTCAGCTTTTTGCCACGTGTCTTTGTGGCTTATGCGAGGAGACTCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp CGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGCATGCAGGCGTAGAACATGCCTTTGCTaGCGCCGCCTTGCGATTCGA +
Preference number: 4 (lower is better)
Translates to: RVDDKTHPLEHTPAACRRRTCLC*RRLAIR
Trigger: TCGAATCGCAAGGCGGCGTCAGCAAAGGCATGTTCT...ACGCCTGCATGCAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp TCTTCACCAAACAAGGGACCTCCCAGCATCTTGTGCACCTTGGACAGTGTCCTGAGAACATGCCTTTGCTaGCGCCGCCTTGCGATTCGA +
Preference number: 4 (lower is better)
Translates to: SSPNKGPPSILCTLDSVLRTCLC*RRLAIR
Trigger: TCGAATCGCAAGGCGGCGTCAGCAAAGGCATGTTCT...CAGGACACTGTCCAAGGTGCACAAGATGCTGGGAGGTCCCTTGTTTGGTGAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp CGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTCTTGGTCAGGGTGGTGGTACAGTGTCAGGACAATaGAGTAAAAGGACGAGAACA +
Preference number: 4 (lower is better)
Translates to: RLSGHGAASTSGLGQGGGTVSGQ*SKRTRT
Trigger: TGTTCTCGTCCTTTTACTTCATTGTCCTGACACTGT...ACCACCACCCTGACCAAGACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR TCA 90 bp TCCAGGGAGGACAGAGCTTGCCTGAGTGAGCATTCGCTGACACTGGCGGGCTGCTACTTCCCAACACAGTaGCAAAGTCAAAGACATTCC +
Preference number: 4 (lower is better)
Translates to: SREDRACLSEHSLTLAGCYFPTQ*QSQRHS
Trigger: GGAATGTCTTTGACTTTGTCACTGTGTTGGGAAGTA...GCAGCCCGCCAGTGTCAGCGAATGCTCACTCAGGCAAGCTCTGTCCTCCCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp CCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGCATGCAGGCCCATCAGCGTGGACGTaGAGTGAACAGTCATGTCCT +
Preference number: 4 (lower is better)
Translates to: PVWMIKLIHWNTRLLHAGPSAWT*SEQSCP
Trigger: AGGACATGACTGTTCACTTCACGTCCACGCTGATGG...GCCTGCATGCAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp ACACACACACACACACACACATCACACACAATTTCTTTGAGGAGAATCATGGGGCCAGTGCCGTCCGGATaGGGGCCATCAGCGTGGACG +
Preference number: 4 (lower is better)
Translates to: THTHTHTSHTISLRRIMGPVPSG*GPSAWT
Trigger: CGTCCACGCTGATGGCCCTCATCCGGACGGCACTGG...CCCCATGATTCTCCTCAAAGAAATTGTGTGTGATGTGTGTGTGTGTGTGTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GCTAGGCTGTGTGGGTTTAGAAAAGTGGATTCTCGACCCAACACTGCCTGGGGAAACTCCGCGTCACACTaGTGCTGCTTTGTCCCAGCT +
Preference number: 4 (lower is better)
Translates to: ARLCGFRKVDSRPNTAWGNSASH*CCFVPA
Trigger: AGCTGGGACAAAGCAGCATCAGTGTGACGCGGAGTT...TCCCCAGGCAGTGTTGGGTCGAGAATCCACTTTTCTAAACCCACACAGCCTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp CCCGAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGAGGAGACAGACTCTTTaGTGCCACTCTCTTGGTTTT +
Preference number: 4 (lower is better)
Translates to: PEGRLPRVDDKTHPLEHTRRQTL*CHSLGF
Trigger: AAAACCAAGAGAGTGGCATCAAAGAGTCTGTCTCCT...CGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTCGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GGGGTAGAAGCCAAGAATCCAACACAGATCATCTGGAATTTCAGAACACGGAGGCTGCATGCAGGCGTCTaGGCGGTCACGGTGCAGCTA +
Preference number: 4 (lower is better)
Translates to: GVEAKNPTQIIWNFRTRRLHAGV*AVTVQL
Trigger: TAGCTGCACCGTGACCGCTCAGACGCCTGCATGCAG...CCTCCGTGTTCTGAAATTCCAGATGATCTGTGTTGGATTCTTGGCTTCTACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp AGGGAGTCTCCTCGCATAAGCCACAAAGACACGTGGCAAAAAGCTGACATCTTTCTGCATGCAGGCGTCTaGGCGGTCACGGTGCAGCTA +
Preference number: 4 (lower is better)
Translates to: RESPRISHKDTWQKADIFLHAGV*AVTVQL
Trigger: TAGCTGCACCGTGACCGCTCAGACGCCTGCATGCAG...AAAGATGTCAGCTTTTTGCCACGTGTCTTTGTGGCTTATGCGAGGAGACTCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GCTAGGCTGTGTGGGTTTAGAAAAGTGGATTCTCGACCCAACACTGCCTGGGGAGCTAGCACCAGATGTTaGCAGCAAGGGGCTCCCATT +
Preference number: 4 (lower is better)
Translates to: ARLCGFRKVDSRPNTAWGASTRC*QQGAPI
Trigger: AATGGGAGCCCCTTGCTGTCAACATCTGGTGCTAGC...TCCCCAGGCAGTGTTGGGTCGAGAATCCACTTTTCTAAACCCACACAGCCTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp TCATGGGGTAGAAGCCAAGAATCCAACACAGATCATCTGGAATTTCAGAACACGGCAGGGAGGCTGGTCTaGGCCCCGGCGAAGTGGATG +
Preference number: 4 (lower is better)
Translates to: SWGRSQESNTDHLEFQNTAGRLV*APAKWM
Trigger: CATCCACTTCGCCGGGGCTCAGACCAGCCTCCCTGC...CGTGTTCTGAAATTCCAGATGATCTGTGTTGGATTCTTGGCTTCTACCCCATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp TCCAGGGAGGACAGAGCTTGCCTGAGTGAGCATTCGCTGACACTGGCGGGCTGCATATGCAGAACAGACTaGAAATGCCTCACACAAGCA +
Preference number: 4 (lower is better)
Translates to: SREDRACLSEHSLTLAGCICRTD*KCLTQA
Trigger: TGCTTGTGTGAGGCATTTTCAGTCTGTTCTGCATAT...GCAGCCCGCCAGTGTCAGCGAATGCTCACTCAGGCAAGCTCTGTCCTCCCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GCTAGGCTGTGTGGGTTTAGAAAAGTGGATTCTCGACCCAACACTGCCTGGGGAGCAACAGGAGCACAGTaGTCACATGCACAGTCCGAG +
Preference number: 4 (lower is better)
Translates to: ARLCGFRKVDSRPNTAWGATGAQ*SHAQSE
Trigger: CTCGGACTGTGCATGTGATCACTGTGCTCCTGTTGC...TCCCCAGGCAGTGTTGGGTCGAGAATCCACTTTTCTAAACCCACACAGCCTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp CGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGCATGCAGGCGTGCCAGTTCCAGGTGTTaGCGGCCGCATCGTTTGTAT +
Preference number: 4 (lower is better)
Translates to: RVDDKTHPLEHTPAACRRASSRC*RPHRLY
Trigger: ATACAAACGATGCGGCCGGCAACACCTGGAACTGGC...ACGCCTGCATGCAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp AGGGAGTCTCCTCGCATAAGCCACAAAGACACGTGGCAAAAAGCTGACATCTTTCGCTCGATCTGCTGCTaGCGGCGCAGCTTCAGGAAG +
Preference number: 4 (lower is better)
Translates to: RESPRISHKDTWQKADIFRSICC*RRSFRK
Trigger: CTTCCTGAAGCTGCGCCGGCAGCAGCAGATCGAGCG...AAAGATGTCAGCTTTTTGCCACGTGTCTTTGTGGCTTATGCGAGGAGACTCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp AGGGAGTCTCCTCGCATAAGCCACAAAGACACGTGGCAAAAAGCTGACATCTTTAGCTCTCGCTCGATCTaGTGCTGCCGGCGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: RESPRISHKDTWQKADIFSSRSI*CCRRSF
Trigger: GAAGCTGCGCCGGCAGCAGCAGATCGAGCGAGAGCT...AAAGATGTCAGCTTTTTGCCACGTGTCTTTGTGGCTTATGCGAGGAGACTCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp CCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGCATGCAGGCGGATCAGGTCATTTCTaGTCTTCTTGGTGGCCGCTC +
Preference number: 4 (lower is better)
Translates to: PVWMIKLIHWNTRLLHAGGSGHF*SSWWPL
Trigger: GAGCGGCCACCAAGAAGAGCAGAAATGACCTGATCC...GCCTGCATGCAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GAAAATGCCTCACACAAGCACGTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCAACAGCACAGAGATCTaGAAACCGGTCCTCTCCCTC +
Preference number: 4 (lower is better)
Translates to: ENASHKHVVSCPVASLETNSTEI*KPVLSL
Trigger: GAGGGAGAGGACCGGTTTGCAGATCTCTGTGCTGTT...GGTTTCCAAGGAAGCCACAGGGCAGCTGACCACGTGCTTGTGTGAGGCATTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp CCTGCTGCATGCAGGCGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTCTTCAGGAAAACAAACTCTaGAAAATACAGGGTCGTGGT +
Preference number: 4 (lower is better)
Translates to: PAACRRLSGHGAASTSGLQENKL*KIQGRG
Trigger: ACCACGACCCTGTATTTTGCAGAGTTTGTTTTCCTG...AAGACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACGCCTGCATGCAGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR GCA 90 bp TCATGGGGTAGAAGCCAAGAATCCAACACAGATCATCTGGAATTTCAGAACACGCGCCGGCGCACTCCTTaGTCGGATCCTGGTGCCGGT +
Preference number: 4 (lower is better)
Translates to: SWGRSQESNTDHLEFQNTRRRTP*SDPGAG
Trigger: ACCGGCACCAGGATCCGAGCAAGGAGTGCGCCGGCG...CGTGTTCTGAAATTCCAGATGATCTGTGTTGGATTCTTGGCTTCTACCCCATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp CGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGCATGCAGGCGTCCAAATACTGACCCCTaGAGTCCCTCTCCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: RVDDKTHPLEHTPAACRRPNTDP*SPSPAP
Trigger: AGGAGCTGGAGAGGGACTGCAGGGGTCAGTATTTGG...ACGCCTGCATGCAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGTTATACTGGAACGACTaGCGGTTTTGGGGCATGTAC +
Preference number: 4 (lower is better)
Translates to: AGCPVWMIKLIHWNTRLLLYWND*RFWGMY
Trigger: GTACATGCCCCAAAACCGGCAGTCGTTCCAGTATAA...CAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp ACGCCTGCTGCATGCAGGCGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTCTCGTACTCATAGGGTaGATCATAGAACTTCATCAT +
Preference number: 4 (lower is better)
Translates to: TPAACRRLSGHGAASTSGLVLIG*IIELHH
Trigger: ATGATGAAGTTCTATGATGCACCCTATGAGTACGAG...ACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACGCCTGCATGCAGCAGGCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR GCA 90 bp GCTGCATGCAGGCGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTCTTGGTGAATATCATCAGAGCTaGATAAACCTTCCCCACTGT +
Preference number: 4 (lower is better)
Translates to: AACRRLSGHGAASTSGLGEYHQS*INLPHC
Trigger: ACAGTGGGGAAGGTTTATGCAGCTCTGATGATATTC...ACCAAGACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACGCCTGCATGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR GCA 90 bp GTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCCCTTCCACTCGTGGGAGGAGGGAATATCATCAGAGCTaGATAAACCTTCCCCACTGT +
Preference number: 4 (lower is better)
Translates to: VVSCPVASLETPSTRGRREYHQS*INLPHC
Trigger: ACAGTGGGGAAGGTTTATGCAGCTCTGATGATATTC...CCTCCTCCCACGAGTGGAAGGGGTTTCCAAGGAAGCCACAGGGCAGCTGACCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp CGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGCATGCAGGCGTCACAGCACTGCTTGGTaGGCCATCCATATCGGCAGA +
Preference number: 4 (lower is better)
Translates to: RVDDKTHPLEHTPAACRRHSTAW*AIHIGR
Trigger: TCTGCCGATATGGATGGCGCACCAAGCAGTGCTGTG...ACGCCTGCATGCAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp AGGGAGTCTCCTCGCATAAGCCACAAAGACACGTGGCAAAAAGCTGACATCTTTCACACGCCTGCTGCATaGAGGCGTCTGAGCGGTCAC +
Preference number: 4 (lower is better)
Translates to: RESPRISHKDTWQKADIFHTPAA*RRLSGH
Trigger: GTGACCGCTCAGACGCCTGCATGCAGCAGGCGTGTG...AAAGATGTCAGCTTTTTGCCACGTGTCTTTGTGGCTTATGCGAGGAGACTCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp CGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGCATGCAGGCGTCTTTTCACAGCATCCTaGGGTGATGGATCCCGAGGC +
Preference number: 4 (lower is better)
Translates to: RVDDKTHPLEHTPAACRRLFTAS*GDGSRG
Trigger: GCCTCGGGATCCATCACCGCAGGATGCTGTGAAAAG...ACGCCTGCATGCAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp AGACTGAAAATGCCTCACACAAGCACGTGGTCAGCTGCCCTGTGGCTTCCTTGGGGCTTGCTACCTGGCTaGCATCGCGAGTACTTTTCA +
Preference number: 4 (lower is better)
Translates to: RLKMPHTSTWSAALWLPWGLLPG*HREYFS
Trigger: TGAAAAGTACTCGCGATGGCAGCCAGGTAGCAAGCC...CCAAGGAAGCCACAGGGCAGCTGACCACGTGCTTGTGTGAGGCATTTTCAGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GCTAGGCTGTGTGGGTTTAGAAAAGTGGATTCTCGACCCAACACTGCCTGGGGACACCATGACATCCAGTaGTCTCCACTGGCAAGGGCT +
Preference number: 4 (lower is better)
Translates to: ARLCGFRKVDSRPNTAWGHHDIQ*SPLARA
Trigger: AGCCCTTGCCAGTGGAGAGCACTGGATGTCATGGTG...TCCCCAGGCAGTGTTGGGTCGAGAATCCACTTTTCTAAACCCACACAGCCTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp TCATGGGGTAGAAGCCAAGAATCCAACACAGATCATCTGGAATTTCAGAACACGCTGGCGCCAGGACAGTaGTGGGCATCAGGTGCCCGG +
Preference number: 4 (lower is better)
Translates to: SWGRSQESNTDHLEFQNTLAPGQ*WASGAR
Trigger: CCGGGCACCTGATGCCCAGCACTGTCCTGGCGCCAG...CGTGTTCTGAAATTCCAGATGATCTGTGTTGGATTCTTGGCTTCTACCCCATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GAAAATGCCTCACACAAGCACGTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCCACCTGTACAGGCACTaGATCTCCTGTGACACAGAC +
Preference number: 4 (lower is better)
Translates to: ENASHKHVVSCPVASLETHLYRH*ISCDTD
Trigger: GTCTGTGTCACAGGAGATGCAGTGCCTGTACAGGTG...GGTTTCCAAGGAAGCCACAGGGCAGCTGACCACGTGCTTGTGTGAGGCATTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp CCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGCATGCAGGCCACCTGTACAGGCACTaGATCTCCTGTGACACAGAC +
Preference number: 4 (lower is better)
Translates to: PVWMIKLIHWNTRLLHAGHLYRH*ISCDTD
Trigger: GTCTGTGTCACAGGAGATGCAGTGCCTGTACAGGTG...GCCTGCATGCAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp CCCGAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCACATCCTTCTACTTTaGAACAGGAGCACAGTGATC +
Preference number: 4 (lower is better)
Translates to: PEGRLPRVDDKTHPLEHTHILLL*NRSTVI
Trigger: GATCACTGTGCTCCTGTTGCAAAGTAGAAGGATGTG...CGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTCGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTCTTGGTCAGGGTGGTGGTGGAACACCGTCAAGATaGCAAACAGGATATTGTCAA +
Preference number: 4 (lower is better)
Translates to: RLSGHGAASTSGLGQGGGGTPSR*QTGYCQ
Trigger: TTGACAATATCCTGTTTGCCATCTTGACGGTGTTCC...ACCACCACCCTGACCAAGACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CCA 90 bp GTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCCCTTCCACTCGTGGGAGGAGGGGAACACCGTCAAGATaGCAAACAGGATATTGTCAA +
Preference number: 4 (lower is better)
Translates to: VVSCPVASLETPSTRGRRGTPSR*QTGYCQ
Trigger: TTGACAATATCCTGTTTGCCATCTTGACGGTGTTCC...CCTCCTCCCACGAGTGGAAGGGGTTTCCAAGGAAGCCACAGGGCAGCTGACCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGCATGCAGGCTCTCCTCTTCATCCTTaGTCAGCTCTTGGGCGTTGG +
Preference number: 4 (lower is better)
Translates to: PVWMIKLIHWNTRLLHAGSPLHP*SALGRW
Trigger: CCAACGCCCAAGAGCTGACCAAGGATGAAGAGGAGA...GCCTGCATGCAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGAGCAAGCTTCTGATTaGCTGCTTCTTCCATCTCCT +
Preference number: 4 (lower is better)
Translates to: EGRLPRVDDKTHPLEHTPEQASD*LLLPSP
Trigger: AGGAGATGGAAGAAGCAGCCAATCAGAAGCTTGCTC...AGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp AGGGAGTCTCCTCGCATAAGCCACAAAGACACGTGGCAAAAAGCTGACATCTTTGCTGCCTGGCGGCGATaGAGATGTTCGCGGCAGACA +
Preference number: 4 (lower is better)
Translates to: RESPRISHKDTWQKADIFAAWRR*RCSRQT
Trigger: TGTCTGCCGCGAACATCTCCATCGCCGCCAGGCAGC...AAAGATGTCAGCTTTTTGCCACGTGTCTTTGTGGCTTATGCGAGGAGACTCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp ACACACACACACACACACACATCACACACAATTTCTTTGAGGAGAATCATGGGGTCCTTGCTCGGATCCTaGTGCCGGTGCGCGCGGTGG +
Preference number: 4 (lower is better)
Translates to: THTHTHTSHTISLRRIMGSLLGS*CRCARW
Trigger: CCACCGCGCGCACCGGCACCAGGATCCGAGCAAGGA...CCCCATGATTCTCCTCAAAGAAATTGTGTGTGATGTGTGTGTGTGTGTGTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp TCATGGGGTAGAAGCCAAGAATCCAACACAGATCATCTGGAATTTCAGAACACGTCCTTGCTCGGATCCTaGTGCCGGTGCGCGCGGTGG +
Preference number: 4 (lower is better)
Translates to: SWGRSQESNTDHLEFQNTSLLGS*CRCARW
Trigger: CCACCGCGCGCACCGGCACCAGGATCCGAGCAAGGA...CGTGTTCTGAAATTCCAGATGATCTGTGTTGGATTCTTGGCTTCTACCCCATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CCCGAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGGCCCGTCAGCATCACTaGGATATGTACAATAGTGTT +
Preference number: 4 (lower is better)
Translates to: PEGRLPRVDDKTHPLEHTARQHH*DMYNSV
Trigger: AACACTATTGTACATATCCCAGTGATGCTGACGGGC...CGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTCGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGCATGCAGGCGTAACGACTGCCGGTTTTaGGGCATGTACCGTGTCAGG +
Preference number: 4 (lower is better)
Translates to: RVDDKTHPLEHTPAACRRNDCRF*GMYRVR
Trigger: CCTGACACGGTACATGCCCCAAAACCGGCAGTCGTT...ACGCCTGCATGCAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CGGTTTAGGGTCTGGTGTGTGGTACGAGACCCAGGAAGGCAGGACAGGAAGGGGGCATCTGGTCTCTGGTaGTTTTGTTCTGCTTGTAGA +
Preference number: 4 (lower is better)
Translates to: RFRVWCVVRDPGRQDRKGASGLW*FCSACR
Trigger: TCTACAAGCAGAACAAAACCACCAGAGACCAGATGC...CCCCTTCCTGTCCTGCCTTCCTGGGTCTCGTACCACACACCAGACCCTAAACCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GAAAATGCCTCACACAAGCACGTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCGGAGCCTGCTGCATCTaGTCTCTGGTGGTTTTGTTC +
Preference number: 4 (lower is better)
Translates to: ENASHKHVVSCPVASLETGACCI*SLVVLF
Trigger: GAACAAAACCACCAGAGACCAGATGCAGCAGGCTCC...GGTTTCCAAGGAAGCCACAGGGCAGCTGACCACGTGCTTGTGTGAGGCATTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp AGGGAGTCTCCTCGCATAAGCCACAAAGACACGTGGCAAAAAGCTGACATCTTTGTGGGCGGTCCGGGGTaGTGCTGCAAAGATGAGTCC +
Preference number: 4 (lower is better)
Translates to: RESPRISHKDTWQKADIFVGGPG*CCKDES
Trigger: GGACTCATCTTTGCAGCACCACCCCGGACCGCCCAC...AAAGATGTCAGCTTTTTGCCACGTGTCTTTGTGGCTTATGCGAGGAGACTCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp AGGGAGTCTCCTCGCATAAGCCACAAAGACACGTGGCAAAAAGCTGACATCTTTAGCGGCCCGAGTTGGTaGCCACAGCCTCCTCGAAAG +
Preference number: 4 (lower is better)
Translates to: RESPRISHKDTWQKADIFSGPSW*PQPPRK
Trigger: CTTTCGAGGAGGCTGTGGCCACCAACTCGGGCCGCT...AAAGATGTCAGCTTTTTGCCACGTGTCTTTGTGGCTTATGCGAGGAGACTCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GGGGTAGAAGCCAAGAATCCAACACAGATCATCTGGAATTTCAGAACACGGAGGTGCAGTGGTAACCGTTaGGCACGCGGCGGAGAGGGT +
Preference number: 4 (lower is better)
Translates to: GVEAKNPTQIIWNFRTRRCSGNR*ARGGEG
Trigger: ACCCTCTCCGCCGCGTGCCCAACGGTTACCACTGCA...CCTCCGTGTTCTGAAATTCCAGATGATCTGTGTTGGATTCTTGGCTTCTACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp AGACTGAAAATGCCTCACACAAGCACGTGGTCAGCTGCCCTGTGGCTTCCTTGGTTCTGCTCTTCTTGGTaGCCGCTCTCTTCAGCACTG +
Preference number: 4 (lower is better)
Translates to: RLKMPHTSTWSAALWLPWFCSSW*PLSSAL
Trigger: CAGTGCTGAAGAGAGCGGCCACCAAGAAGAGCAGAA...CCAAGGAAGCCACAGGGCAGCTGACCACGTGCTTGTGTGAGGCATTTTCAGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371355.8
ENST00000371357.5
CDS-3UTR CCA 90 bp ACACACACACACACACACACATCACACACAATTTCTTTGAGGAGAATCATGGGGACGGCTGAGCCGGCCTaGGGAGAAGGCAGGGAGGCT +
Preference number: 4 (lower is better)
Translates to: THTHTHTSHTISLRRIMGTAEPA*GEGREA
Trigger: AGCCTCCCTGCCTTCTCCCCAGGCCGGCTCAGCCGT...CCCCATGATTCTCCTCAAAGAAATTGTGTGTGATGTGTGTGTGTGTGTGTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp TCATGGGGTAGAAGCCAAGAATCCAACACAGATCATCTGGAATTTCAGAACACGACGGCTGAGCCGGCCTaGGGAGAAGGCAGGGAGGCT +
Preference number: 4 (lower is better)
Translates to: SWGRSQESNTDHLEFQNTTAEPA*GEGREA
Trigger: AGCCTCCCTGCCTTCTCCCCAGGCCGGCTCAGCCGT...CGTGTTCTGAAATTCCAGATGATCTGTGTTGGATTCTTGGCTTCTACCCCATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp AGACTGAAAATGCCTCACACAAGCACGTGGTCAGCTGCCCTGTGGCTTCCTTGGGAGGAGGACAGCAAATaGCTGCCTTGTTTGCCACCA +
Preference number: 4 (lower is better)
Translates to: RLKMPHTSTWSAALWLPWEEDSK*LPCLPP
Trigger: TGGTGGCAAACAAGGCAGCCATTTGCTGTCCTCCTC...CCAAGGAAGCCACAGGGCAGCTGACCACGTGCTTGTGTGAGGCATTTTCAGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CCCGAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCAACACAGATCATCTaGAATTTCAGAACACGGAGG +
Preference number: 4 (lower is better)
Translates to: PEGRLPRVDDKTHPLEHTPTQII*NFRTRR
Trigger: CCTCCGTGTTCTGAAATTCCAGATGATCTGTGTTGG...CGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTCGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCCCTTCCACTCGTGGGAGGAGGTGTTGCATAGCCCTATaGGTTAATGACATCCACACA +
Preference number: 4 (lower is better)
Translates to: VVSCPVASLETPSTRGRRCCIAL*VNDIHT
Trigger: TGTGTGGATGTCATTAACCCATAGGGCTATGCAACA...CCTCCTCCCACGAGTGGAAGGGGTTTCCAAGGAAGCCACAGGGCAGCTGACCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGCATGCAGGCCAAGATAACATGGGCTaGGGGCTGGGGAACAAGAGA +
Preference number: 4 (lower is better)
Translates to: PVWMIKLIHWNTRLLHAGQDNMG*GLGNKR
Trigger: TCTCTTGTTCCCCAGCCCCCAGCCCATGTTATCTTG...GCCTGCATGCAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GAAAATGCCTCACACAAGCACGTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCCACTGCCTGGGGAAATaGCTGTGGTTCTGCATGGAA +
Preference number: 4 (lower is better)
Translates to: ENASHKHVVSCPVASLETHCLGK*LWFCME
Trigger: TTCCATGCAGAACCACAGCCATTTCCCCAGGCAGTG...GGTTTCCAAGGAAGCCACAGGGCAGCTGACCACGTGCTTGTGTGAGGCATTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GCTAGGCTGTGTGGGTTTAGAAAAGTGGATTCTCGACCCAACACTGCCTGGGGACGACCCAACACTGCCTaGGGAAATGGCTGTGGTTCT +
Preference number: 4 (lower is better)
Translates to: ARLCGFRKVDSRPNTAWGRPNTA*GNGCGS
Trigger: AGAACCACAGCCATTTCCCCAGGCAGTGTTGGGTCG...TCCCCAGGCAGTGTTGGGTCGAGAATCCACTTTTCTAAACCCACACAGCCTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GCCCGGCCTCAGTGGCAGGAGCCGTGTCCTCCCTCGGTCACTTGCTCTGAGTTTGATGCACTTCAAATTTaGCAGCTCACTATGAGATTC +
Preference number: 4 (lower is better)
Translates to: ARPQWQEPCPPSVTCSEFDALQI*QLTMRF
Trigger: GAATCTCATAGTGAGCTGCCAAATTTGAAGTGCATC...AAACTCAGAGCAAGTGACCGAGGGAGGACACGGCTCCTGCCACTGAGGCCGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp CCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGCATGCAGGCGGGCGAAGACCACAATaGACAGGAAGAGCAAGAAGA +
Preference number: 4 (lower is better)
Translates to: PVWMIKLIHWNTRLLHAGGRRPQ*TGRARR
Trigger: TCTTCTTGCTCTTCCTGTTCATTGTGGTCTTCGCCC...GCCTGCATGCAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GGGGTAGAAGCCAAGAATCCAACACAGATCATCTGGAATTTCAGAACACGGAGGGGATCTGGAAGACAGTaGGGATGGCGGCAGGGAAGG +
Preference number: 4 (lower is better)
Translates to: GVEAKNPTQIIWNFRTRRGSGRQ*GWRQGR
Trigger: CCTTCCCTGCCGCCATCCTCACTGTCTTCCAGATCC...CCTCCGTGTTCTGAAATTCCAGATGATCTGTGTTGGATTCTTGGCTTCTACCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp AGACTGAAAATGCCTCACACAAGCACGTGGTCAGCTGCCCTGTGGCTTCCTTGGTGCGATTCGATCCCGTaGTACATCACTGCATTCCAG +
Preference number: 4 (lower is better)
Translates to: RLKMPHTSTWSAALWLPWCDSIP*YITAFQ
Trigger: CTGGAATGCAGTGATGTATCACGGGATCGAATCGCA...CCAAGGAAGCCACAGGGCAGCTGACCACGTGCTTGTGTGAGGCATTTTCAGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp ACACACACACACACACACACATCACACACAATTTCTTTGAGGAGAATCATGGGGTTCGGGTCTGGGGGCTaGCTGCCCATGCGAGTGACG +
Preference number: 4 (lower is better)
Translates to: THTHTHTSHTISLRRIMGFGSGG*LPMRVT
Trigger: CGTCACTCGCATGGGCAGTCAGCCCCCAGACCCGAA...CCCCATGATTCTCCTCAAAGAAATTGTGTGTGATGTGTGTGTGTGTGTGTGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp AGACTGAAAATGCCTCACACAAGCACGTGGTCAGCTGCCCTGTGGCTTCCTTGGTTTCCCTTTGGATCCTaGGAAAGCAAACGCCACCAG +
Preference number: 4 (lower is better)
Translates to: RLKMPHTSTWSAALWLPWFPFGS*ESKRHQ
Trigger: CTGGTGGCGTTTGCTTTCTCAGGATCCAAAGGGAAA...CCAAGGAAGCCACAGGGCAGCTGACCACGTGCTTGTGTGAGGCATTTTCAGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGTGGAGAACATGGATGTaGACACGATGTTCAGGCATT +
Preference number: 4 (lower is better)
Translates to: AGCPVWMIKLIHWNTRLLWRTWM*TRCSGI
Trigger: AATGCCTGAACATCGTGTTCACATCCATGTTCTCCA...CAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GCTAGGCTGTGTGGGTTTAGAAAAGTGGATTCTCGACCCAACACTGCCTGGGGAAGAACAGCATGGCAATaGGCAGACACACGTAGGGCA +
Preference number: 4 (lower is better)
Translates to: ARLCGFRKVDSRPNTAWGRTAWQ*ADTRRA
Trigger: TGCCCTACGTGTGTCTGCTCATTGCCATGCTGTTCT...TCCCCAGGCAGTGTTGGGTCGAGAATCCACTTTTCTAAACCCACACAGCCTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp CCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGCATGCAGGCAACTCATCCAAGTGGTaGGGACCTAGGATGGAAGAG +
Preference number: 4 (lower is better)
Translates to: PVWMIKLIHWNTRLLHAGNSSKW*GPRMEE
Trigger: CTCTTCCATCCTAGGTCCTCACCACTTGGATGAGTT...GCCTGCATGCAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp TCTTCACCAAACAAGGGACCTCCCAGCATCTTGTGCACCTTGGACAGTGTCCTGCCATCAGCGTGGACGTaGAGTGAACAGTCATGTCCT +
Preference number: 4 (lower is better)
Translates to: SSPNKGPPSILCTLDSVLPSAWT*SEQSCP
Trigger: AGGACATGACTGTTCACTTCACGTCCACGCTGATGG...CAGGACACTGTCCAAGGTGCACAAGATGCTGGGAGGTCCCTTGTTTGGTGAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp ACACACACACACACACACACATCACACACAATTTCTTTGAGGAGAATCATGGGGCAGCTGGGGCCAGCTTaGTCTCCAGTGCCGTCCGGA +
Preference number: 4 (lower is better)
Translates to: THTHTHTSHTISLRRIMGQLGPA*SPVPSG
Trigger: TCCGGACGGCACTGGAGATCAAGCTGGCCCCAGCTG...CCCCATGATTCTCCTCAAAGAAATTGTGTGTGATGTGTGTGTGTGTGTGTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTAGGAGACAGACTCTTTaGTGCCACTCTCTTGGTTTT +
Preference number: 4 (lower is better)
Translates to: EGRLPRVDDKTHPLEHTPRRQTL*CHSLGF
Trigger: AAAACCAAGAGAGTGGCATCAAAGAGTCTGTCTCCT...AGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp CGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGCATGCAGGCGTGTTATGCTCTGCATCTaGACGTCCACAGCCAGTGCT +
Preference number: 4 (lower is better)
Translates to: RVDDKTHPLEHTPAACRRVMLCI*TSTASA
Trigger: AGCACTGGCTGTGGACGTTCAGATGCAGAGCATAAC...ACGCCTGCATGCAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp TCATGGGGTAGAAGCCAAGAATCCAACACAGATCATCTGGAATTTCAGAACACGACGTTGGGTGGCTGCTaGGGGAGGGCTTGGGCTTCG +
Preference number: 4 (lower is better)
Translates to: SWGRSQESNTDHLEFQNTTLGGC*GRAWAS
Trigger: CGAAGCCCAAGCCCTCCCTCAGCAGCCACCCAACGT...CGTGTTCTGAAATTCCAGATGATCTGTGTTGGATTCTTGGCTTCTACCCCATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp TCTTCACCAAACAAGGGACCTCCCAGCATCTTGTGCACCTTGGACAGTGTCCTGCCTTGTTTGCCACCATaGCATCCAGTGCTCTCCACT +
Preference number: 4 (lower is better)
Translates to: SSPNKGPPSILCTLDSVLPCLPP*HPVLST
Trigger: AGTGGAGAGCACTGGATGTCATGGTGGCAAACAAGG...CAGGACACTGTCCAAGGTGCACAAGATGCTGGGAGGTCCCTTGTTTGGTGAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GCTTGCCTGAGTGAGCATTCGCTGACACTGGCGGGCTGCACAAGCCACGACTGTATATGCAGAACAGACTaGAAATGCCTCACACAAGCA +
Preference number: 4 (lower is better)
Translates to: ACLSEHSLTLAGCTSHDCICRTD*KCLTQA
Trigger: TGCTTGTGTGAGGCATTTTCAGTCTGTTCTGCATAT...ACAGTCGTGGCTTGTGCAGCCCGCCAGTGTCAGCGAATGCTCACTCAGGCAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp CCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGCATGCAGGCCCACAGAGTGTGCCCTaGGAATCATATGCAGAACAG +
Preference number: 4 (lower is better)
Translates to: PVWMIKLIHWNTRLLHAGPQSVP*ESYAEQ
Trigger: CTGTTCTGCATATGATTCTCAGGGCACACTCTGTGG...GCCTGCATGCAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GAAAATGCCTCACACAAGCACGTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCCCACAGAGTGTGCCCTaGGAATCATATGCAGAACAG +
Preference number: 4 (lower is better)
Translates to: ENASHKHVVSCPVASLETPQSVP*ESYAEQ
Trigger: CTGTTCTGCATATGATTCTCAGGGCACACTCTGTGG...GGTTTCCAAGGAAGCCACAGGGCAGCTGACCACGTGCTTGTGTGAGGCATTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GGGGTAGAAGCCAAGAATCCAACACAGATCATCTGGAATTTCAGAACACGGAGGGGGTCAGACCTCACTTaGCTGCCTGCTCCCTGTGTC +
Preference number: 4 (lower is better)
Translates to: GVEAKNPTQIIWNFRTRRGSDLT*LPAPCV
Trigger: GACACAGGGAGCAGGCAGTCAAGTGAGGTCTGACCC...CCTCCGTGTTCTGAAATTCCAGATGATCTGTGTTGGATTCTTGGCTTCTACCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GAAAATGCCTCACACAAGCACGTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCATGACATCCACACACTaGACACACCTGTACAGGCAC +
Preference number: 4 (lower is better)
Translates to: ENASHKHVVSCPVASLETMTSTH*THLYRH
Trigger: GTGCCTGTACAGGTGTGTTCAGTGTGTGGATGTCAT...GGTTTCCAAGGAAGCCACAGGGCAGCTGACCACGTGCTTGTGTGAGGCATTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GCTAGGCTGTGTGGGTTTAGAAAAGTGGATTCTCGACCCAACACTGCCTGGGGAAGGCCTTGTGGAACTTaGCCATGTAGAACTCCAGGC +
Preference number: 4 (lower is better)
Translates to: ARLCGFRKVDSRPNTAWGRPCGT*PCRTPG
Trigger: GCCTGGAGTTCTACATGGGCAAGTTCCACAAGGCCT...TCCCCAGGCAGTGTTGGGTCGAGAATCCACTTTTCTAAACCCACACAGCCTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp ACACACACACACACACACACATCACACACAATTTCTTTGAGGAGAATCATGGGGTTGTCCTTGTCGCGGTaGCGGTGGTGCCTGCGCGGA +
Preference number: 4 (lower is better)
Translates to: THTHTHTSHTISLRRIMGLSLSR*RWCLRG
Trigger: TCCGCGCAGGCACCACCGGCACCGCGACAAGGACAA...CCCCATGATTCTCCTCAAAGAAATTGTGTGTGATGTGTGTGTGTGTGTGTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GCTAGGCTGTGTGGGTTTAGAAAAGTGGATTCTCGACCCAACACTGCCTGGGGAGTTCCGCTGATTGTCTaGATCCTCTGGCTGTTCCTC +
Preference number: 4 (lower is better)
Translates to: ARLCGFRKVDSRPNTAWGVPLIV*ILWLFL
Trigger: GAGGAACAGCCAGAGGATGCAGACAATCAGCGGAAC...TCCCCAGGCAGTGTTGGGTCGAGAATCCACTTTTCTAAACCCACACAGCCTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp CCTGCTGCATGCAGGCGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTCTTCCTTGGATTCATCTGTaGAGTAGAAAAACTTCCCTT +
Preference number: 4 (lower is better)
Translates to: PAACRRLSGHGAASTSGLPWIHL*SRKTSL
Trigger: AAGGGAAGTTTTTCTACTGCACAGATGAATCCAAGG...AAGACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACGCCTGCATGCAGCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR GCA 90 bp GTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCCCTTCCACTCGTGGGAGGAGGCCTTGGATTCATCTGTaGAGTAGAAAAACTTCCCTT +
Preference number: 4 (lower is better)
Translates to: VVSCPVASLETPSTRGRRPWIHL*SRKTSL
Trigger: AAGGGAAGTTTTTCTACTGCACAGATGAATCCAAGG...CCTCCTCCCACGAGTGGAAGGGGTTTCCAAGGAAGCCACAGGGCAGCTGACCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp CCTGCTGCATGCAGGCGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTCTTCTCGTACTCATAGGGTaGATCATAGAACTTCATCAT +
Preference number: 4 (lower is better)
Translates to: PAACRRLSGHGAASTSGLLVLIG*IIELHH
Trigger: ATGATGAAGTTCTATGATGCACCCTATGAGTACGAG...AAGACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACGCCTGCATGCAGCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR GCA 90 bp GGGGTAGAAGCCAAGAATCCAACACAGATCATCTGGAATTTCAGAACACGGAGGACAGCCGGCTGTGTCTaGTCCAGGGTGGCCTTCAGA +
Preference number: 4 (lower is better)
Translates to: GVEAKNPTQIIWNFRTRRTAGCV*SRVAFR
Trigger: TCTGAAGGCCACCCTGGAGCAGACACAGCCGGCTGT...CCTCCGTGTTCTGAAATTCCAGATGATCTGTGTTGGATTCTTGGCTTCTACCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp TCATGGGGTAGAAGCCAAGAATCCAACACAGATCATCTGGAATTTCAGAACACGCGGCCACGTGAAGGGTaGTCCCCACAGGACGCAGAG +
Preference number: 4 (lower is better)
Translates to: SWGRSQESNTDHLEFQNTRPREG*SPQDAE
Trigger: CTCTGCGTCCTGTGGGGAGCACCCTTCACGTGGCCG...CGTGTTCTGAAATTCCAGATGATCTGTGTTGGATTCTTGGCTTCTACCCCATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp CCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGCATGCAGGCAATGGCTGCCTTGTTTaGCACCATGACATCCAGTGC +
Preference number: 4 (lower is better)
Translates to: PVWMIKLIHWNTRLLHAGNGCLV*HHDIQC
Trigger: GCACTGGATGTCATGGTGGCAAACAAGGCAGCCATT...GCCTGCATGCAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GAAAATGCCTCACACAAGCACGTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCAGGACAGCAAATGGCTaGCTTGTTTGCCACCATGAC +
Preference number: 4 (lower is better)
Translates to: ENASHKHVVSCPVASLETRTANG*LVCHHD
Trigger: GTCATGGTGGCAAACAAGGCAGCCATTTGCTGTCCT...GGTTTCCAAGGAAGCCACAGGGCAGCTGACCACGTGCTTGTGTGAGGCATTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCCCTTCCACTCGTGGGAGGAGGATCAACTGCTCTAAATaGTCCCTTTCTTCACCAAAC +
Preference number: 4 (lower is better)
Translates to: VVSCPVASLETPSTRGRRINCSK*SLSSPN
Trigger: GTTTGGTGAAGAAAGGGAGCATTTAGAGCAGTTGAT...CCTCCTCCCACGAGTGGAAGGGGTTTCCAAGGAAGCCACAGGGCAGCTGACCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp AGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGTAAATGTGTCTTTTGTTaGATAGCCCTATGGGTTAAT +
Preference number: 4 (lower is better)
Translates to: RSRRTFRWALLLCAARPRKCVFC*IALWVN
Trigger: ATTAACCCATAGGGCTATGCAACAAAAGACACATTT...ACGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp TCCAGGGAGGACAGAGCTTGCCTGAGTGAGCATTCGCTGACACTGGCGGGCTGCAGTTTCAGAGTGTTGTaGCTTCAGGTAAGGAAATTC +
Preference number: 4 (lower is better)
Translates to: SREDRACLSEHSLTLAGCSFRVL*LQVRKF
Trigger: GAATTTCCTTACCTGAAGGCACAACACTCTGAAACT...GCAGCCCGCCAGTGTCAGCGAATGCTCACTCAGGCAAGCTCTGTCCTCCCTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGCATGCAGGCCACCACCTGCAAACTTaGAATCCCAGACACCAGCTT +
Preference number: 4 (lower is better)
Translates to: PVWMIKLIHWNTRLLHAGHHLQT*NPRHQL
Trigger: AAGCTGGTGTCTGGGATTCCAAGTTTGCAGGTGGTG...GCCTGCATGCAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CTCGTGGGAGGAGGACAGCAAATGGCTGCCTTGTTTGCCACCATGACATCCAGTCACCACCTGCAAACTTaGAATCCCAGACACCAGCTT +
Preference number: 4 (lower is better)
Translates to: LVGGGQQMAALFATMTSSHHLQT*NPRHQL
Trigger: AAGCTGGTGTCTGGGATTCCAAGTTTGCAGGTGGTG...ACTGGATGTCATGGTGGCAAACAAGGCAGCCATTTGCTGTCCTCCTCCCACGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GGGGTAGAAGCCAAGAATCCAACACAGATCATCTGGAATTTCAGAACACGGAGGGCCAAAGTTGGGTCCTaGCCAGTACTCCCGGCACTC +
Preference number: 4 (lower is better)
Translates to: GVEAKNPTQIIWNFRTRRAKVGS*PVLPAL
Trigger: GAGTGCCGGGAGTACTGGCCAGGACCCAACTTTGGC...CCTCCGTGTTCTGAAATTCCAGATGATCTGTGTTGGATTCTTGGCTTCTACCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp TCTTCACCAAACAAGGGACCTCCCAGCATCTTGTGCACCTTGGACAGTGTCCTGTCTCCCTCCTCTGCGTaGATCAGGTCATTTCTGCTC +
Preference number: 4 (lower is better)
Translates to: SSPNKGPPSILCTLDSVLSPSSA*IRSFLL
Trigger: GAGCAGAAATGACCTGATCCACGCAGAGGAGGGAGA...CAGGACACTGTCCAAGGTGCACAAGATGCTGGGAGGTCCCTTGTTTGGTGAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GCTAGGCTGTGTGGGTTTAGAAAAGTGGATTCTCGACCCAACACTGCCTGGGGATCTCCCTCCTCTGCGTaGATCAGGTCATTTCTGCTC +
Preference number: 4 (lower is better)
Translates to: ARLCGFRKVDSRPNTAWGSPSSA*IRSFLL
Trigger: GAGCAGAAATGACCTGATCCACGCAGAGGAGGGAGA...TCCCCAGGCAGTGTTGGGTCGAGAATCCACTTTTCTAAACCCACACAGCCTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGCATGCAGGCGTGTGGGAGTCTCATCCTaGAAGTTGAACTGTCCCCCA +
Preference number: 4 (lower is better)
Translates to: RVDDKTHPLEHTPAACRRVGVSS*KLNCPP
Trigger: TGGGGGACAGTTCAACTTCCAGGATGAGACTCCCAC...ACGCCTGCATGCAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp TCATGGGGTAGAAGCCAAGAATCCAACACAGATCATCTGGAATTTCAGAACACGACACCGAGCGCGCCTTaGCCGAGTTCTGCTGCCTGG +
Preference number: 4 (lower is better)
Translates to: SWGRSQESNTDHLEFQNTTPSAP*PSSAAW
Trigger: CCAGGCAGCAGAACTCGGCCAAGGCGCGCTCGGTGT...CGTGTTCTGAAATTCCAGATGATCTGTGTTGGATTCTTGGCTTCTACCCCATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCCCGTCAGCATCACTaGGATATGTACAATAGTGTT +
Preference number: 4 (lower is better)
Translates to: EGRLPRVDDKTHPLEHTPARQHH*DMYNSV
Trigger: AACACTATTGTACATATCCCAGTGATGCTGACGGGC...AGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp TCATGGGGTAGAAGCCAAGAATCCAACACAGATCATCTGGAATTTCAGAACACGCACTGGGAACGACCGTaGCTTCCCCAAGAGGGCCCG +
Preference number: 4 (lower is better)
Translates to: SWGRSQESNTDHLEFQNTHWERP*LPQEGP
Trigger: CGGGCCCTCTTGGGGAAGCCACGGTCGTTCCCAGTG...CGTGTTCTGAAATTCCAGATGATCTGTGTTGGATTCTTGGCTTCTACCCCATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp AGGGAGTCTCCTCGCATAAGCCACAAAGACACGTGGCAAAAAGCTGACATCTTTGGTCCACGTTACCACTaGGAACGACCGTGGCTTCCC +
Preference number: 4 (lower is better)
Translates to: RESPRISHKDTWQKADIFGPRYH*ERPWLP
Trigger: GGGAAGCCACGGTCGTTCCCAGTGGTAACGTGGACC...AAAGATGTCAGCTTTTTGCCACGTGTCTTTGTGGCTTATGCGAGGAGACTCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp AGACTGAAAATGCCTCACACAAGCACGTGGTCAGCTGCCCTGTGGCTTCCTTGGGTCCACGTCTTATACTaGAACGACTGCCGGTTTTGG +
Preference number: 4 (lower is better)
Translates to: RLKMPHTSTWSAALWLPWVHVLY*NDCRFW
Trigger: CCAAAACCGGCAGTCGTTCCAGTATAAGACGTGGAC...CCAAGGAAGCCACAGGGCAGCTGACCACGTGCTTGTGTGAGGCATTTTCAGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GGGGTAGAAGCCAAGAATCCAACACAGATCATCTGGAATTTCAGAACACGGAGGACAGCAGGATGCGGATaGTGTAGCCCTGGCGGAGCA +
Preference number: 4 (lower is better)
Translates to: GVEAKNPTQIIWNFRTRRTAGCG*CSPGGA
Trigger: TGCTCCGCCAGGGCTACACCATCCGCATCCTGCTGT...CCTCCGTGTTCTGAAATTCCAGATGATCTGTGTTGGATTCTTGGCTTCTACCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGCATGCAGGCGTGTCCGGAAGTTGTTGTaGCGGTTGATGCTGGTGTCA +
Preference number: 4 (lower is better)
Translates to: RVDDKTHPLEHTPAACRRVRKLL*RLMLVS
Trigger: TGACACCAGCATCAACCGCCACAACAACTTCCGGAC...ACGCCTGCATGCAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGCATGCAGGCTGTCCTCGTTGGAGATaGGCATGTTCATGCGAACCA +
Preference number: 4 (lower is better)
Translates to: PVWMIKLIHWNTRLLHAGCPRWR*ACSCEP
Trigger: TGGTTCGCATGAACATGCCCATCTCCAACGAGGACA...GCCTGCATGCAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GGATTCTCGACCCAACACTGCCTGGGGAAATGGCTGTGGTTCTGCATGGAATGGTGTCCTCGTTGGAGATaGGCATGTTCATGCGAACCA +
Preference number: 4 (lower is better)
Translates to: GFSTQHCLGKWLWFCMEWCPRWR*ACSCEP
Trigger: TGGTTCGCATGAACATGCCCATCTCCAACGAGGACA...CCATTCCATGCAGAACCACAGCCATTTCCCCAGGCAGTGTTGGGTCGAGAATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGCATGCAGGCCAGTCATGTCCTCGTTaGAGATGGGCATGTTCATGC +
Preference number: 4 (lower is better)
Translates to: PVWMIKLIHWNTRLLHAGQSCPR*RWACSC
Trigger: GCATGAACATGCCCATCTCCAACGAGGACATGACTG...GCCTGCATGCAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GAAAATGCCTCACACAAGCACGTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCTTGATGCCACTCTCTTaGTTTTGTATGGCCCCGCCA +
Preference number: 4 (lower is better)
Translates to: ENASHKHVVSCPVASLETLMPLS*FCMAPP
Trigger: TGGCGGGGCCATACAAAACCAAGAGAGTGGCATCAA...GGTTTCCAAGGAAGCCACAGGGCAGCTGACCACGTGCTTGTGTGAGGCATTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp AGACTGAAAATGCCTCACACAAGCACGTGGTCAGCTGCCCTGTGGCTTCCTTGGTTGATGCCACTCTCTTaGTTTTGTATGGCCCCGCCA +
Preference number: 4 (lower is better)
Translates to: RLKMPHTSTWSAALWLPWLMPLS*FCMAPP
Trigger: TGGCGGGGCCATACAAAACCAAGAGAGTGGCATCAA...CCAAGGAAGCCACAGGGCAGCTGACCACGTGCTTGTGTGAGGCATTTTCAGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp TCATGGGGTAGAAGCCAAGAATCCAACACAGATCATCTGGAATTTCAGAACACGGGGATCTCTGTGGAGTaGCCACGCTCCAGGGGTGGC +
Preference number: 4 (lower is better)
Translates to: SWGRSQESNTDHLEFQNTGISVE*PRSRGG
Trigger: GCCACCCCTGGAGCGTGGCCACTCCACAGAGATCCC...CGTGTTCTGAAATTCCAGATGATCTGTGTTGGATTCTTGGCTTCTACCCCATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp TCATGGGGTAGAAGCCAAGAATCCAACACAGATCATCTGGAATTTCAGAACACGGCCGCTGGGCCAGCGTaGAGATGGAGCGCTTCATGG +
Preference number: 4 (lower is better)
Translates to: SWGRSQESNTDHLEFQNTAAGPA*RWSASW
Trigger: CCATGAAGCGCTCCATCTCCACGCTGGCCCAGCGGC...CGTGTTCTGAAATTCCAGATGATCTGTGTTGGATTCTTGGCTTCTACCCCATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp TCTTCACCAAACAAGGGACCTCCCAGCATCTTGTGCACCTTGGACAGTGTCCTGCAAGATAACATGGGCTaGGGGCTGGGGAACAAGAGA +
Preference number: 4 (lower is better)
Translates to: SSPNKGPPSILCTLDSVLQDNMG*GLGNKR
Trigger: TCTCTTGTTCCCCAGCCCCCAGCCCATGTTATCTTG...CAGGACACTGTCCAAGGTGCACAAGATGCTGGGAGGTCCCTTGTTTGGTGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GCTAGGCTGTGTGGGTTTAGAAAAGTGGATTCTCGACCCAACACTGCCTGGGGACACTGCCTGGGGAAATaGCTGTGGTTCTGCATGGAA +
Preference number: 4 (lower is better)
Translates to: ARLCGFRKVDSRPNTAWGHCLGK*LWFCME
Trigger: TTCCATGCAGAACCACAGCCATTTCCCCAGGCAGTG...TCCCCAGGCAGTGTTGGGTCGAGAATCCACTTTTCTAAACCCACACAGCCTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GAAAATGCCTCACACAAGCACGTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCCAGCCACTGCTTGACTaGTTCCAGATGCAGACAACT +
Preference number: 4 (lower is better)
Translates to: ENASHKHVVSCPVASLETQPLLD*FQMQTT
Trigger: AGTTGTCTGCATCTGGAACCAGTCAAGCAGTGGCTG...GGTTTCCAAGGAAGCCACAGGGCAGCTGACCACGTGCTTGTGTGAGGCATTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp ACACACACACACACACACACATCACACACAATTTCTTTGAGGAGAATCATGGGGAGGAGCTTCCCGGCTTaGTGGCCGCCCAGACCACTT +
Preference number: 4 (lower is better)
Translates to: THTHTHTSHTISLRRIMGRSFPA*WPPRPL
Trigger: AAGTGGTCTGGGCGGCCATCAAGCCGGGAAGCTCCT...CCCCATGATTCTCCTCAAAGAAATTGTGTGTGATGTGTGTGTGTGTGTGTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GCTAGGCTGTGTGGGTTTAGAAAAGTGGATTCTCGACCCAACACTGCCTGGGGAGGGCGAAGACCACAATaGACAGGAAGAGCAAGAAGA +
Preference number: 4 (lower is better)
Translates to: ARLCGFRKVDSRPNTAWGGRRPQ*TGRARR
Trigger: TCTTCTTGCTCTTCCTGTTCATTGTGGTCTTCGCCC...TCCCCAGGCAGTGTTGGGTCGAGAATCCACTTTTCTAAACCCACACAGCCTAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GCTAGGCTGTGTGGGTTTAGAAAAGTGGATTCTCGACCCAACACTGCCTGGGGATGCGATTCGATCCCGTaGTACATCACTGCATTCCAG +
Preference number: 4 (lower is better)
Translates to: ARLCGFRKVDSRPNTAWGCDSIP*YITAFQ
Trigger: CTGGAATGCAGTGATGTATCACGGGATCGAATCGCA...TCCCCAGGCAGTGTTGGGTCGAGAATCCACTTTTCTAAACCCACACAGCCTAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GGGGTAGAAGCCAAGAATCCAACACAGATCATCTGGAATTTCAGAACACGGAGGGACTGCCCATGCGAGTaGCGTTCCGCTGATTGTCTG +
Preference number: 4 (lower is better)
Translates to: GVEAKNPTQIIWNFRTRRDCPCE*RSADCL
Trigger: CAGACAATCAGCGGAACGTCACTCGCATGGGCAGTC...CCTCCGTGTTCTGAAATTCCAGATGATCTGTGTTGGATTCTTGGCTTCTACCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp CGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGCATGCAGGCGTTTTCCCTTTGGATCCTaGGAAAGCAAACGCCACCAG +
Preference number: 4 (lower is better)
Translates to: RVDDKTHPLEHTPAACRRFPFGS*ESKRHQ
Trigger: CTGGTGGCGTTTGCTTTCTCAGGATCCAAAGGGAAA...ACGCCTGCATGCAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTAGACAATCAAGATGTTaGGGACATTCTTCAGGGAGT +
Preference number: 4 (lower is better)
Translates to: EGRLPRVDDKTHPLEHTPRQSRC*GHSSGS
Trigger: ACTCCCTGAAGAATGTCCTCAACATCTTGATTGTCT...AGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGTACTTCCCAACACAGTaGCAAAGTCAAAGACATTCC +
Preference number: 4 (lower is better)
Translates to: AGCPVWMIKLIHWNTRLLYFPTQ*QSQRHS
Trigger: GGAATGTCTTTGACTTTGTCACTGTGTTGGGAAGTA...CAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp CGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGCATGCAGGCGTAACTCATCCAAGTGGTaGGGACCTAGGATGGAAGAG +
Preference number: 4 (lower is better)
Translates to: RVDDKTHPLEHTPAACRRNSSKW*GPRMEE
Trigger: CTCTTCCATCCTAGGTCCTCACCACTTGGATGAGTT...ACGCCTGCATGCAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp ACACACACACACACACACACATCACACACAATTTCTTTGAGGAGAATCATGGGGCTGCATGCAGGCGTCTaGGCGGTCACGGTGCAGCTA +
Preference number: 4 (lower is better)
Translates to: THTHTHTSHTISLRRIMGLHAGV*AVTVQL
Trigger: TAGCTGCACCGTGACCGCTCAGACGCCTGCATGCAG...CCCCATGATTCTCCTCAAAGAAATTGTGTGTGATGTGTGTGTGTGTGTGTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp CGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGCATGCAGGCGTATGACATCCACACACTaGACACACCTGTACAGGCAC +
Preference number: 4 (lower is better)
Translates to: RVDDKTHPLEHTPAACRRMTSTH*THLYRH
Trigger: GTGCCTGTACAGGTGTGTTCAGTGTGTGGATGTCAT...ACGCCTGCATGCAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GAAAATGCCTCACACAAGCACGTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCCCGGAGAAGACACAGTaGGAAACAAAACCCAAAGTC +
Preference number: 4 (lower is better)
Translates to: ENASHKHVVSCPVASLETPEKTQ*ETKPKV
Trigger: GACTTTGGGTTTTGTTTCTCACTGTGTCTTCTCCGG...GGTTTCCAAGGAAGCCACAGGGCAGCTGACCACGTGCTTGTGTGAGGCATTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GCTAGGCTGTGTGGGTTTAGAAAAGTGGATTCTCGACCCAACACTGCCTGGGGAGACTTGAGCACCACCTaGAAACTTGGAATCCCAGAC +
Preference number: 4 (lower is better)
Translates to: ARLCGFRKVDSRPNTAWGDLSTT*KLGIPD
Trigger: GTCTGGGATTCCAAGTTTGCAGGTGGTGCTCAAGTC...TCCCCAGGCAGTGTTGGGTCGAGAATCCACTTTTCTAAACCCACACAGCCTAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp ACACACACACACACACACACATCACACACAATTTCTTTGAGGAGAATCATGGGGAGCTCTCGCTCGATCTaGTGCTGCCGGCGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: THTHTHTSHTISLRRIMGSSRSI*CCRRSF
Trigger: GAAGCTGCGCCGGCAGCAGCAGATCGAGCGAGAGCT...CCCCATGATTCTCCTCAAAGAAATTGTGTGTGATGTGTGTGTGTGTGTGTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTCAGGAAAACAAACTCTaGAAAATACAGGGTCGTGGT +
Preference number: 4 (lower is better)
Translates to: EGRLPRVDDKTHPLEHTPQENKL*KIQGRG
Trigger: ACCACGACCCTGTATTTTGCAGAGTTTGTTTTCCTG...AGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGCAGGAAAACAAACTCTaGAAAATACAGGGTCGTGGT +
Preference number: 4 (lower is better)
Translates to: AGCPVWMIKLIHWNTRLLQENKL*KIQGRG
Trigger: ACCACGACCCTGTATTTTGCAGAGTTTGTTTTCCTG...CAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp TCACATGCACAGTCCGAGATTCCTGGTTTATTCTATTGGAATAAAATACTCTGTGGTGCCGGTGGTGCCTaGGCGGAGGGTCGACGCCCT +
Preference number: 4 (lower is better)
Translates to: SHAQSEIPGLFYWNKILCGAGGA*AEGRRP
Trigger: AGGGCGTCGACCCTCCGCGCAGGCACCACCGGCACC...ACAGAGTATTTTATTCCAATAGAATAAACCAGGAATCTCGGACTGTGCATGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp TCACATGCACAGTCCGAGATTCCTGGTTTATTCTATTGGAATAAAATACTCTGTTCGCGGTGCCGGTGGTaGCTGCGCGGAGGGTCGACG +
Preference number: 4 (lower is better)
Translates to: SHAQSEIPGLFYWNKILCSRCRW*LRGGST
Trigger: CGTCGACCCTCCGCGCAGGCACCACCGGCACCGCGA...ACAGAGTATTTTATTCCAATAGAATAAACCAGGAATCTCGGACTGTGCATGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp ACACACACACACACACACACATCACACACAATTTCTTTGAGGAGAATCATGGGGTCCTGGGCGAGTCTGTaGGCACTGGGTCCTCAGCAG +
Preference number: 4 (lower is better)
Translates to: THTHTHTSHTISLRRIMGSWASL*ALGPQQ
Trigger: CTGCTGAGGACCCAGTGCGCACAGACTCGCCCAGGA...CCCCATGATTCTCCTCAAAGAAATTGTGTGTGATGTGTGTGTGTGTGTGTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GGGGTAGAAGCCAAGAATCCAACACAGATCATCTGGAATTTCAGAACACGGAGGAGATGGACAGCTCCATaGGGTACCCAGGGCTTGGAC +
Preference number: 4 (lower is better)
Translates to: GVEAKNPTQIIWNFRTRRRWTAP*GTQGLD
Trigger: GTCCAAGCCCTGGGTACCGCATGGAGCTGTCCATCT...CCTCCGTGTTCTGAAATTCCAGATGATCTGTGTTGGATTCTTGGCTTCTACCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp CGGTTTAGGGTCTGGTGTGTGGTACGAGACCCAGGAAGGCAGGACAGGAAGGGGCTCGTACTCATAGGGTaGATCATAGAACTTCATCAT +
Preference number: 4 (lower is better)
Translates to: RFRVWCVVRDPGRQDRKGLVLIG*IIELHH
Trigger: ATGATGAAGTTCTATGATGCACCCTATGAGTACGAG...CCCCTTCCTGTCCTGCCTTCCTGGGTCTCGTACCACACACCAGACCCTAAACCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp TCTTCACCAAACAAGGGACCTCCCAGCATCTTGTGCACCTTGGACAGTGTCCTGAGATGGGCATGTTCATaGGAACCAGGCGCTTGTAAG +
Preference number: 4 (lower is better)
Translates to: SSPNKGPPSILCTLDSVLRWACS*EPGACK
Trigger: CTTACAAGCGCCTGGTTCGCATGAACATGCCCATCT...CAGGACACTGTCCAAGGTGCACAAGATGCTGGGAGGTCCCTTGTTTGGTGAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GCTAGGCTGTGTGGGTTTAGAAAAGTGGATTCTCGACCCAACACTGCCTGGGGAAGATGGGCATGTTCATaGGAACCAGGCGCTTGTAAG +
Preference number: 4 (lower is better)
Translates to: ARLCGFRKVDSRPNTAWGRWACS*EPGACK
Trigger: CTTACAAGCGCCTGGTTCGCATGAACATGCCCATCT...TCCCCAGGCAGTGTTGGGTCGAGAATCCACTTTTCTAAACCCACACAGCCTAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp TCATGGGGTAGAAGCCAAGAATCCAACACAGATCATCTGGAATTTCAGAACACGCACACGCCTGCTGCATaGAGGCGTCTGAGCGGTCAC +
Preference number: 4 (lower is better)
Translates to: SWGRSQESNTDHLEFQNTHTPAA*RRLSGH
Trigger: GTGACCGCTCAGACGCCTGCATGCAGCAGGCGTGTG...CGTGTTCTGAAATTCCAGATGATCTGTGTTGGATTCTTGGCTTCTACCCCATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp ACACACACACACACACACACATCACACACAATTTCTTTGAGGAGAATCATGGGGCTTTCAGGTGGGCCCTaGTTCTCTGTGCCGCACGGC +
Preference number: 4 (lower is better)
Translates to: THTHTHTSHTISLRRIMGLSGGP*FSVPHG
Trigger: GCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAG...CCCCATGATTCTCCTCAAAGAAATTGTGTGTGATGTGTGTGTGTGTGTGTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp CCACGTGAAGGGTGCTCCCCACAGGACGCAGAGCTCCTCACAACGGCTCCAAGCAAATGTGTCTTTTGTTaGATAGCCCTATGGGTTAAT +
Preference number: 4 (lower is better)
Translates to: PREGCSPQDAELLTTAPSKCVFC*IALWVN
Trigger: ATTAACCCATAGGGCTATGCAACAAAAGACACATTT...GCTTGGAGCCGTTGTGAGGAGCTCTGCGTCCTGTGGGGAGCACCCTTCACGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp TCTTCACCAAACAAGGGACCTCCCAGCATCTTGTGCACCTTGGACAGTGTCCTGAGCACAGTGATCACATaGACAGTCCGAGATTCCTGG +
Preference number: 4 (lower is better)
Translates to: SSPNKGPPSILCTLDSVLSTVIT*TVRDSW
Trigger: CCAGGAATCTCGGACTGTGCATGTGATCACTGTGCT...CAGGACACTGTCCAAGGTGCACAAGATGCTGGGAGGTCCCTTGTTTGGTGAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GCTAGGCTGTGTGGGTTTAGAAAAGTGGATTCTCGACCCAACACTGCCTGGGGAAGCACAGTGATCACATaGACAGTCCGAGATTCCTGG +
Preference number: 4 (lower is better)
Translates to: ARLCGFRKVDSRPNTAWGSTVIT*TVRDSW
Trigger: CCAGGAATCTCGGACTGTGCATGTGATCACTGTGCT...TCCCCAGGCAGTGTTGGGTCGAGAATCCACTTTTCTAAACCCACACAGCCTAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp AGACTGAAAATGCCTCACACAAGCACGTGGTCAGCTGCCCTGTGGCTTCCTTGGTTGACTGGTTCCAGATaGAGACAACTGGGTGATGCA +
Preference number: 4 (lower is better)
Translates to: RLKMPHTSTWSAALWLPWLTGSR*RQLGDA
Trigger: TGCATCACCCAGTTGTCTGCATCTGGAACCAGTCAA...CCAAGGAAGCCACAGGGCAGCTGACCACGTGCTTGTGTGAGGCATTTTCAGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GCTAGGCTGTGTGGGTTTAGAAAAGTGGATTCTCGACCCAACACTGCCTGGGGAGATCATATACTCGAATaGAGGCCACTCGGTGATGCG +
Preference number: 4 (lower is better)
Translates to: ARLCGFRKVDSRPNTAWGDHILE*RPLGDA
Trigger: CGCATCACCGAGTGGCCTCCATTCGAGTATATGATC...TCCCCAGGCAGTGTTGGGTCGAGAATCCACTTTTCTAAACCCACACAGCCTAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CAGCAAACTAGTCAATCACAGAATTTCTTTTTAAGTAGGTCCCAGTTGTGTTGCCTCGCACAGCCGGGCTaGGGCCTCCTTGCCACAGGG +
Preference number: 4 (lower is better)
Translates to: QQTSQSQNFFLSRSQLCCLAQPG*GLLATG
Trigger: CCCTGTGGCAAGGAGGCCCCAGCCCGGCTGTGCGAG...GCAACACAACTGGGACCTACTTAAAAAGAAATTCTGTGATTGACTAGTTTGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GCTAGGCTGTGTGGGTTTAGAAAAGTGGATTCTCGACCCAACACTGCCTGGGGACATTTCTGCTCTTCTTaGTGGCCGCTCTCTTCAGCA +
Preference number: 4 (lower is better)
Translates to: ARLCGFRKVDSRPNTAWGHFCSS*WPLSSA
Trigger: TGCTGAAGAGAGCGGCCACCAAGAAGAGCAGAAATG...TCCCCAGGCAGTGTTGGGTCGAGAATCCACTTTTCTAAACCCACACAGCCTAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGCATGCAGGCTGTCGAAGTTGGTTGTaGGAGTCTCATCCTGGAAGT +
Preference number: 4 (lower is better)
Translates to: PVWMIKLIHWNTRLLHAGCRSWL*ESHPGS
Trigger: ACTTCCAGGATGAGACTCCCACAACCAACTTCGACA...GCCTGCATGCAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GGATTCTCGACCCAACACTGCCTGGGGAAATGGCTGTGGTTCTGCATGGAATGGGAGCAAGCTTCTGATTaGCTGCTTCTTCCATCTCCT +
Preference number: 4 (lower is better)
Translates to: GFSTQHCLGKWLWFCMEWEQASD*LLLPSP
Trigger: AGGAGATGGAAGAAGCAGCCAATCAGAAGCTTGCTC...CCATTCCATGCAGAACCACAGCCATTTCCCCAGGCAGTGTTGGGTCGAGAATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGCATGCAGGCGTCCCTCTCCAGCTCCTTaGATTCATCTGTGCAGTAGA +
Preference number: 4 (lower is better)
Translates to: RVDDKTHPLEHTPAACRRPSPAP*IHLCSR
Trigger: TCTACTGCACAGATGAATCCAAGGAGCTGGAGAGGG...ACGCCTGCATGCAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp AGGGAGTCTCCTCGCATAAGCCACAAAGACACGTGGCAAAAAGCTGACATCTTTCACACTCGGTGGCATTaGCCTGCTCATCACAGGCCT +
Preference number: 4 (lower is better)
Translates to: RESPRISHKDTWQKADIFHTRWH*PAHHRP
Trigger: AGGCCTGTGATGAGCAGGCCAATGCCACCGAGTGTG...AAAGATGTCAGCTTTTTGCCACGTGTCTTTGTGGCTTATGCGAGGAGACTCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GAAAATGCCTCACACAAGCACGTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCATCAGGCTTATGGGGTaGTACCAGCAAGTCCAAAGT +
Preference number: 4 (lower is better)
Translates to: ENASHKHVVSCPVASLETIRLMG*YQQVQS
Trigger: ACTTTGGACTTGCTGGTACCACCCCATAAGCCTGAT...GGTTTCCAAGGAAGCCACAGGGCAGCTGACCACGTGCTTGTGTGAGGCATTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GGATTCTCGACCCAACACTGCCTGGGGAAATGGCTGTGGTTCTGCATGGAATGGATCAGGCTTATGGGGTaGTACCAGCAAGTCCAAAGT +
Preference number: 4 (lower is better)
Translates to: GFSTQHCLGKWLWFCMEWIRLMG*YQQVQS
Trigger: ACTTTGGACTTGCTGGTACCACCCCATAAGCCTGAT...CCATTCCATGCAGAACCACAGCCATTTCCCCAGGCAGTGTTGGGTCGAGAATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGCATGCAGGCGCTGCATCTGGTCTCTaGTGGTTTTGTTCTGCTTGT +
Preference number: 4 (lower is better)
Translates to: PVWMIKLIHWNTRLLHAGAASGL*WFCSAC
Trigger: ACAAGCAGAACAAAACCACCAGAGACCAGATGCAGC...GCCTGCATGCAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp AGGGAGTCTCCTCGCATAAGCCACAAAGACACGTGGCAAAAAGCTGACATCTTTGTGTCTGCTCCAGGGTaGCCTTCAGAGGGTGGAACA +
Preference number: 4 (lower is better)
Translates to: RESPRISHKDTWQKADIFVSAPG*PSEGGT
Trigger: TGTTCCACCCTCTGAAGGCCACCCTGGAGCAGACAC...AAAGATGTCAGCTTTTTGCCACGTGTCTTTGTGGCTTATGCGAGGAGACTCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp ACACACACACACACACACACATCACACACAATTTCTTTGAGGAGAATCATGGGGGTGGGCGGTCCGGGGTaGTGCTGCAAAGATGAGTCC +
Preference number: 4 (lower is better)
Translates to: THTHTHTSHTISLRRIMGVGGPG*CCKDES
Trigger: GGACTCATCTTTGCAGCACCACCCCGGACCGCCCAC...CCCCATGATTCTCCTCAAAGAAATTGTGTGTGATGTGTGTGTGTGTGTGTGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp TCATGGGGTAGAAGCCAAGAATCCAACACAGATCATCTGGAATTTCAGAACACGAGCTGTTGGCGACGTTaGGTGGCTGCTGAGGGAGGG +
Preference number: 4 (lower is better)
Translates to: SWGRSQESNTDHLEFQNTSCWRR*VAAEGG
Trigger: CCCTCCCTCAGCAGCCACCCAACGTCGCCAACAGCT...CGTGTTCTGAAATTCCAGATGATCTGTGTTGGATTCTTGGCTTCTACCCCATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GGGGTAGAAGCCAAGAATCCAACACAGATCATCTGGAATTTCAGAACACGGAGGGCCCTGTGGCTTCCTTaGAAACCCCTTCCACTCGTG +
Preference number: 4 (lower is better)
Translates to: GVEAKNPTQIIWNFRTRRALWLP*KPLPLV
Trigger: CACGAGTGGAAGGGGTTTCCAAGGAAGCCACAGGGC...CCTCCGTGTTCTGAAATTCCAGATGATCTGTGTTGGATTCTTGGCTTCTACCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CGGTTTAGGGTCTGGTGTGTGGTACGAGACCCAGGAAGGCAGGACAGGAAGGGGGATGCACTTCAAATTTaGCAGCTCACTATGAGATTC +
Preference number: 4 (lower is better)
Translates to: RFRVWCVVRDPGRQDRKGDALQI*QLTMRF
Trigger: GAATCTCATAGTGAGCTGCCAAATTTGAAGTGCATC...CCCCTTCCTGTCCTGCCTTCCTGGGTCTCGTACCACACACCAGACCCTAAACCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp AGGGAGTCTCCTCGCATAAGCCACAAAGACACGTGGCAAAAAGCTGACATCTTTCTTCCTCCGGAAGTATaGCGAGCTCTCTGTCTTCCC +
Preference number: 4 (lower is better)
Translates to: RESPRISHKDTWQKADIFLPPEV*RALCLP
Trigger: GGGAAGACAGAGAGCTCGTCATACTTCCGGAGGAAG...AAAGATGTCAGCTTTTTGCCACGTGTCTTTGTGGCTTATGCGAGGAGACTCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp AGGGAGTCTCCTCGCATAAGCCACAAAGACACGTGGCAAAAAGCTGACATCTTTGCACCCCAAAGGCGATaGTCTTCAGCACGCATTCCA +
Preference number: 4 (lower is better)
Translates to: RESPRISHKDTWQKADIFAPQRR*SSARIP
Trigger: TGGAATGCGTGCTGAAGATCATCGCCTTTGGGGTGC...AAAGATGTCAGCTTTTTGCCACGTGTCTTTGTGGCTTATGCGAGGAGACTCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GCTAGGCTGTGTGGGTTTAGAAAAGTGGATTCTCGACCCAACACTGCCTGGGGACATTCCAGGCATCTCTaGAATAGTTCAGCACCCCAA +
Preference number: 4 (lower is better)
Translates to: ARLCGFRKVDSRPNTAWGHSRHL*NSSAPQ
Trigger: TTGGGGTGCTGAACTATTTCAGAGATGCCTGGAATG...TCCCCAGGCAGTGTTGGGTCGAGAATCCACTTTTCTAAACCCACACAGCCTAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp AGGGAGTCTCCTCGCATAAGCCACAAAGACACGTGGCAAAAAGCTGACATCTTTACATGTCATTGTAACTaGTGCGCCCACACGCAGCCG +
Preference number: 4 (lower is better)
Translates to: RESPRISHKDTWQKADIFTCHCN*CAHTQP
Trigger: CGGCTGCGTGTGGGCGCATCAGTTACAATGACATGT...AAAGATGTCAGCTTTTTGCCACGTGTCTTTGTGGCTTATGCGAGGAGACTCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GGGGTAGAAGCCAAGAATCCAACACAGATCATCTGGAATTTCAGAACACGGAGGAACTCCGCGTCACACTaGTGCTGCTTTGTCCCAGCT +
Preference number: 4 (lower is better)
Translates to: GVEAKNPTQIIWNFRTRRNSASH*CCFVPA
Trigger: AGCTGGGACAAAGCAGCATCAGTGTGACGCGGAGTT...CCTCCGTGTTCTGAAATTCCAGATGATCTGTGTTGGATTCTTGGCTTCTACCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp CTCGTGGGAGGAGGACAGCAAATGGCTGCCTTGTTTGCCACCATGACATCCAGTAGGAGACAGACTCTTTaGTGCCACTCTCTTGGTTTT +
Preference number: 4 (lower is better)
Translates to: LVGGGQQMAALFATMTSSRRQTL*CHSLGF
Trigger: AAAACCAAGAGAGTGGCATCAAAGAGTCTGTCTCCT...ACTGGATGTCATGGTGGCAAACAAGGCAGCCATTTGCTGTCCTCCTCCCACGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp CAGCAAACTAGTCAATCACAGAATTTCTTTTTAAGTAGGTCCCAGTTGTGTTGCACGCGGCGGAGAGGGTaGGACTGGGAGGTCAGGGAG +
Preference number: 4 (lower is better)
Translates to: QQTSQSQNFFLSRSQLCCTRRRG*DWEVRE
Trigger: CTCCCTGACCTCCCAGTCTCACCCTCTCCGCCGCGT...GCAACACAACTGGGACCTACTTAAAAAGAAATTCTGTGATTGACTAGTTTGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp AGACTGAAAATGCCTCACACAAGCACGTGGTCAGCTGCCCTGTGGCTTCCTTGGCACGTGGCAAAAAGCTaGCATCTTTCTTTCACAGGT +
Preference number: 4 (lower is better)
Translates to: RLKMPHTSTWSAALWLPWHVAKS*HLSFTG
Trigger: ACCTGTGAAAGAAAGATGTCAGCTTTTTGCCACGTG...CCAAGGAAGCCACAGGGCAGCTGACCACGTGCTTGTGTGAGGCATTTTCAGTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp CGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGCATGCAGGCGTCCGGAGAAGACACAGTaGGAAACAAAACCCAAAGTC +
Preference number: 4 (lower is better)
Translates to: RVDDKTHPLEHTPAACRRPEKTQ*ETKPKV
Trigger: GACTTTGGGTTTTGTTTCTCACTGTGTCTTCTCCGG...ACGCCTGCATGCAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp CGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGCATGCAGGCGTTTCCCTTTGAAGAGCTaGACCGCAATGACGGCAAAT +
Preference number: 4 (lower is better)
Translates to: RVDDKTHPLEHTPAACRRFPLKS*TAMTAN
Trigger: ATTTGCCGTCATTGCGGTGCAGCTCTTCAAAGGGAA...ACGCCTGCATGCAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp CGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGCATGCAGGCGTTTATACTGGAACGACTaGCGGTTTTGGGGCATGTAC +
Preference number: 4 (lower is better)
Translates to: RVDDKTHPLEHTPAACRRLYWND*RFWGMY
Trigger: GTACATGCCCCAAAACCGGCAGTCGTTCCAGTATAA...ACGCCTGCATGCAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp TCTTCACCAAACAAGGGACCTCCCAGCATCTTGTGCACCTTGGACAGTGTCCTGTTATACTGGAACGACTaGCGGTTTTGGGGCATGTAC +
Preference number: 4 (lower is better)
Translates to: SSPNKGPPSILCTLDSVLLYWND*RFWGMY
Trigger: GTACATGCCCCAAAACCGGCAGTCGTTCCAGTATAA...CAGGACACTGTCCAAGGTGCACAAGATGCTGGGAGGTCCCTTGTTTGGTGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GCTAGGCTGTGTGGGTTTAGAAAAGTGGATTCTCGACCCAACACTGCCTGGGGATTATACTGGAACGACTaGCGGTTTTGGGGCATGTAC +
Preference number: 4 (lower is better)
Translates to: ARLCGFRKVDSRPNTAWGLYWND*RFWGMY
Trigger: GTACATGCCCCAAAACCGGCAGTCGTTCCAGTATAA...TCCCCAGGCAGTGTTGGGTCGAGAATCCACTTTTCTAAACCCACACAGCCTAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp AGGGAGTCTCCTCGCATAAGCCACAAAGACACGTGGCAAAAAGCTGACATCTTTCTTTTCACAGCATCCTaGGGTGATGGATCCCGAGGC +
Preference number: 4 (lower is better)
Translates to: RESPRISHKDTWQKADIFLFTAS*GDGSRG
Trigger: GCCTCGGGATCCATCACCGCAGGATGCTGTGAAAAG...AAAGATGTCAGCTTTTTGCCACGTGTCTTTGTGGCTTATGCGAGGAGACTCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp CCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGCATGCAGGCACATACCACAGAGTGTaGCCTGAGAATCATATGCAG +
Preference number: 4 (lower is better)
Translates to: PVWMIKLIHWNTRLLHAGTYHRV*PENHMQ
Trigger: CTGCATATGATTCTCAGGGCACACTCTGTGGTATGT...GCCTGCATGCAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GGATTCTCGACCCAACACTGCCTGGGGAAATGGCTGTGGTTCTGCATGGAATGGACATACCACAGAGTGTaGCCTGAGAATCATATGCAG +
Preference number: 4 (lower is better)
Translates to: GFSTQHCLGKWLWFCMEWTYHRV*PENHMQ
Trigger: CTGCATATGATTCTCAGGGCACACTCTGTGGTATGT...CCATTCCATGCAGAACCACAGCCATTTCCCCAGGCAGTGTTGGGTCGAGAATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp CGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGCATGCAGGCGTCTTCCTACCAGCCTTTaGCTCTCTTCTGCTGTATGT +
Preference number: 4 (lower is better)
Translates to: RVDDKTHPLEHTPAACRRLPTSL*LSSAVC
Trigger: ACATACAGCAGAAGAGAGGCAAAGGCTGGTAGGAAG...ACGCCTGCATGCAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp ACACACACACACACACACACATCACACACAATTTCTTTGAGGAGAATCATGGGGCCTCACTTGACTGCCTaGTCCCTGTGTCTGGCGCCA +
Preference number: 4 (lower is better)
Translates to: THTHTHTSHTISLRRIMGPHLTA*SLCLAP
Trigger: TGGCGCCAGACACAGGGAGCAGGCAGTCAAGTGAGG...CCCCATGATTCTCCTCAAAGAAATTGTGTGTGATGTGTGTGTGTGTGTGTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGAGTTTCAGAGTGTTGTaGCTTCAGGTAAGGAAATTC +
Preference number: 4 (lower is better)
Translates to: AGCPVWMIKLIHWNTRLLSFRVL*LQVRKF
Trigger: GAATTTCCTTACCTGAAGGCACAACACTCTGAAACT...CAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GGATTCTCGACCCAACACTGCCTGGGGAAATGGCTGTGGTTCTGCATGGAATGGAAATGGCTGTGGTTCTaGATGGAATGGACACATTCG +
Preference number: 4 (lower is better)
Translates to: GFSTQHCLGKWLWFCMEWKWLWF*MEWTHS
Trigger: CGAATGTGTCCATTCCATGCAGAACCACAGCCATTT...CCATTCCATGCAGAACCACAGCCATTTCCCCAGGCAGTGTTGGGTCGAGAATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GAAAATGCCTCACACAAGCACGTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCAAATGGCTGTGGTTCTaGATGGAATGGACACATTCG +
Preference number: 4 (lower is better)
Translates to: ENASHKHVVSCPVASLETKWLWF*MEWTHS
Trigger: CGAATGTGTCCATTCCATGCAGAACCACAGCCATTT...GGTTTCCAAGGAAGCCACAGGGCAGCTGACCACGTGCTTGTGTGAGGCATTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp CCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGCATGCAGGCAAATGGCTGTGGTTCTaGATGGAATGGACACATTCG +
Preference number: 4 (lower is better)
Translates to: PVWMIKLIHWNTRLLHAGKWLWF*MEWTHS
Trigger: CGAATGTGTCCATTCCATGCAGAACCACAGCCATTT...GCCTGCATGCAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp CGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGCATGCAGGCGTTTGACTGGTTCCAGATaGAGACAACTGGGTGATGCA +
Preference number: 4 (lower is better)
Translates to: RVDDKTHPLEHTPAACRRLTGSR*RQLGDA
Trigger: TGCATCACCCAGTTGTCTGCATCTGGAACCAGTCAA...ACGCCTGCATGCAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GCTAGGCTGTGTGGGTTTAGAAAAGTGGATTCTCGACCCAACACTGCCTGGGGAGGTTGTAATGCACCATaGCCACACACAGTGTGTTCA +
Preference number: 4 (lower is better)
Translates to: ARLCGFRKVDSRPNTAWGGCNAP*PHTVCS
Trigger: TGAACACACTGTGTGTGGCCATGGTGCATTACAACC...TCCCCAGGCAGTGTTGGGTCGAGAATCCACTTTTCTAAACCCACACAGCCTAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp AGGGAGTCTCCTCGCATAAGCCACAAAGACACGTGGCAAAAAGCTGACATCTTTTCTCCCGTCAGGATCTaGAAGACAGTGAGGATGGCG +
Preference number: 4 (lower is better)
Translates to: RESPRISHKDTWQKADIFSPVRI*KTVRMA
Trigger: CGCCATCCTCACTGTCTTCCAGATCCTGACGGGAGA...AAAGATGTCAGCTTTTTGCCACGTGTCTTTGTGGCTTATGCGAGGAGACTCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp TCTTCACCAAACAAGGGACCTCCCAGCATCTTGTGCACCTTGGACAGTGTCCTGCTTCAGCCACTTCTTTaGCCTTTTGCAGAGCAAGCT +
Preference number: 4 (lower is better)
Translates to: SSPNKGPPSILCTLDSVLLQPLL*PFAEQA
Trigger: AGCTTGCTCTGCAAAAGGCCAAAGAAGTGGCTGAAG...CAGGACACTGTCCAAGGTGCACAAGATGCTGGGAGGTCCCTTGTTTGGTGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp AGGGAGTCTCCTCGCATAAGCCACAAAGACACGTGGCAAAAAGCTGACATCTTTTGTTCCTCCACCTTCTaGAGACAGGTGCTGGGCAGT +
Preference number: 4 (lower is better)
Translates to: RESPRISHKDTWQKADIFCSSTF*RQVLGS
Trigger: ACTGCCCAGCACCTGTCTCCAGAAGGTGGAGGAACA...AAAGATGTCAGCTTTTTGCCACGTGTCTTTGTGGCTTATGCGAGGAGACTCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp ACACACACACACACACACACATCACACACAATTTCTTTGAGGAGAATCATGGGGGAACATGGAGCTGTATaGGACGATAGGCCGGGGGCC +
Preference number: 4 (lower is better)
Translates to: THTHTHTSHTISLRRIMGEHGAV*DDRPGA
Trigger: GGCCCCCGGCCTATCGTCCCATACAGCTCCATGTTC...CCCCATGATTCTCCTCAAAGAAATTGTGTGTGATGTGTGTGTGTGTGTGTGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GGGGTAGAAGCCAAGAATCCAACACAGATCATCTGGAATTTCAGAACACGGAGGCACTTCCACACTCGGTaGCATTGGCCTGCTCATCAC +
Preference number: 4 (lower is better)
Translates to: GVEAKNPTQIIWNFRTRRHFHTR*HWPAHH
Trigger: GTGATGAGCAGGCCAATGCCACCGAGTGTGGAAGTG...CCTCCGTGTTCTGAAATTCCAGATGATCTGTGTTGGATTCTTGGCTTCTACCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGCATGCAGGCGTATCAGGCTTATGGGGTaGTACCAGCAAGTCCAAAGT +
Preference number: 4 (lower is better)
Translates to: RVDDKTHPLEHTPAACRRIRLMG*YQQVQS
Trigger: ACTTTGGACTTGCTGGTACCACCCCATAAGCCTGAT...ACGCCTGCATGCAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GCTAGGCTGTGTGGGTTTAGAAAAGTGGATTCTCGACCCAACACTGCCTGGGGAGCTGCATCTGGTCTCTaGTGGTTTTGTTCTGCTTGT +
Preference number: 4 (lower is better)
Translates to: ARLCGFRKVDSRPNTAWGAASGL*WFCSAC
Trigger: ACAAGCAGAACAAAACCACCAGAGACCAGATGCAGC...TCCCCAGGCAGTGTTGGGTCGAGAATCCACTTTTCTAAACCCACACAGCCTAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp TCACATGCACAGTCCGAGATTCCTGGTTTATTCTATTGGAATAAAATACTCTGTGTCCCACGGGGCCGCTaGGCCAGCGTGGAGATGGAG +
Preference number: 4 (lower is better)
Translates to: SHAQSEIPGLFYWNKILCVPRGR*ASVEME
Trigger: CTCCATCTCCACGCTGGCCCAGCGGCCCCGTGGGAC...ACAGAGTATTTTATTCCAATAGAATAAACCAGGAATCTCGGACTGTGCATGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CAGCAAACTAGTCAATCACAGAATTTCTTTTTAAGTAGGTCCCAGTTGTGTTGCGGAACCACTGCCCTGTaGGTGGGGTCCCGGCTCCTG +
Preference number: 4 (lower is better)
Translates to: QQTSQSQNFFLSRSQLCCGTTAL*VGSRLL
Trigger: CAGGAGCCGGGACCCCACCCACAGGGCAGTGGTTCC...GCAACACAACTGGGACCTACTTAAAAAGAAATTCTGTGATTGACTAGTTTGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GGGGTAGAAGCCAAGAATCCAACACAGATCATCTGGAATTTCAGAACACGGAGGCCAGGACACGGGATTTaGACTCCTGGGTCCTTCTCA +
Preference number: 4 (lower is better)
Translates to: GVEAKNPTQIIWNFRTRRPGHGI*TPGSFS
Trigger: TGAGAAGGACCCAGGAGTCCAAATCCCGTGTCCTGG...CCTCCGTGTTCTGAAATTCCAGATGATCTGTGTTGGATTCTTGGCTTCTACCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp AGGGAGTCTCCTCGCATAAGCCACAAAGACACGTGGCAAAAAGCTGACATCTTTTGGTCAGCTGCCCTGTaGCTTCCTTGGAAACCCCTT +
Preference number: 4 (lower is better)
Translates to: RESPRISHKDTWQKADIFWSAAL*LPWKPL
Trigger: AAGGGGTTTCCAAGGAAGCCACAGGGCAGCTGACCA...AAAGATGTCAGCTTTTTGCCACGTGTCTTTGTGGCTTATGCGAGGAGACTCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GGATTCTCGACCCAACACTGCCTGGGGAAATGGCTGTGGTTCTGCATGGAATGGCCAACACAGATCATCTaGAATTTCAGAACACGGAGG +
Preference number: 4 (lower is better)
Translates to: GFSTQHCLGKWLWFCMEWPTQII*NFRTRR
Trigger: CCTCCGTGTTCTGAAATTCCAGATGATCTGTGTTGG...CCATTCCATGCAGAACCACAGCCATTTCCCCAGGCAGTGTTGGGTCGAGAATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR CAA 72 bp TCCCTTTCTTCACCAAACAAGGGACCTCCCAGCATCTaGTGCACCTTGGACAGTGTCCTGAGCATGGTCTTT +
Preference number: 4 (lower is better)
Translates to: SLSSPNKGPPSI*CTLDSVLSMVF
Trigger: AAAGACCATGCTCAGGACACTGTCCAAGGTGCACAAGATGCTGGGAGGTCCCTTGTTTGGTGAAGAAAGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp ACACACACACACACACACACATCACACACAATTTCTTTGAGGAGAATCATGGGGACTCCAGGTACCCGTTaGGCTCTCGCTCGATCTGCT +
Preference number: 4 (lower is better)
Translates to: THTHTHTSHTISLRRIMGTPGTR*ALARSA
Trigger: AGCAGATCGAGCGAGAGCTCAACGGGTACCTGGAGT...CCCCATGATTCTCCTCAAAGAAATTGTGTGTGATGTGTGTGTGTGTGTGTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp CCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGCATGCAGGCAGACAATCAAGATGTTaGGGACATTCTTCAGGGAGT +
Preference number: 4 (lower is better)
Translates to: PVWMIKLIHWNTRLLHAGRQSRC*GHSSGS
Trigger: ACTCCCTGAAGAATGTCCTCAACATCTTGATTGTCT...GCCTGCATGCAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GGATTCTCGACCCAACACTGCCTGGGGAAATGGCTGTGGTTCTGCATGGAATGGTACTTCCCAACACAGTaGCAAAGTCAAAGACATTCC +
Preference number: 4 (lower is better)
Translates to: GFSTQHCLGKWLWFCMEWYFPTQ*QSQRHS
Trigger: GGAATGTCTTTGACTTTGTCACTGTGTTGGGAAGTA...CCATTCCATGCAGAACCACAGCCATTTCCCCAGGCAGTGTTGGGTCGAGAATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp AGGGAGTCTCCTCGCATAAGCCACAAAGACACGTGGCAAAAAGCTGACATCTTTAGAACAGCATGGCAATaGGCAGACACACGTAGGGCA +
Preference number: 4 (lower is better)
Translates to: RESPRISHKDTWQKADIFRTAWQ*ADTRRA
Trigger: TGCCCTACGTGTGTCTGCTCATTGCCATGCTGTTCT...AAAGATGTCAGCTTTTTGCCACGTGTCTTTGTGGCTTATGCGAGGAGACTCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp AGGGAGTCTCCTCGCATAAGCCACAAAGACACGTGGCAAAAAGCTGACATCTTTGTTATGCTCTGCATCTaGACGTCCACAGCCAGTGCT +
Preference number: 4 (lower is better)
Translates to: RESPRISHKDTWQKADIFVMLCI*TSTASA
Trigger: AGCACTGGCTGTGGACGTTCAGATGCAGAGCATAAC...AAAGATGTCAGCTTTTTGCCACGTGTCTTTGTGGCTTATGCGAGGAGACTCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp TCACATGCACAGTCCGAGATTCCTGGTTTATTCTATTGGAATAAAATACTCTGTTGGGGCTGGCATCTGTaGCGGGCTGAGTCTCGGCCG +
Preference number: 4 (lower is better)
Translates to: SHAQSEIPGLFYWNKILCWGWHL*RAESRP
Trigger: CGGCCGAGACTCAGCCCGTCACAGATGCCAGCCCCA...ACAGAGTATTTTATTCCAATAGAATAAACCAGGAATCTCGGACTGTGCATGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp TCACATGCACAGTCCGAGATTCCTGGTTTATTCTATTGGAATAAAATACTCTGTACGCGGCGGAGAGGGTaGGACTGGGAGGTCAGGGAG +
Preference number: 4 (lower is better)
Translates to: SHAQSEIPGLFYWNKILCTRRRG*DWEVRE
Trigger: CTCCCTGACCTCCCAGTCTCACCCTCTCCGCCGCGT...ACAGAGTATTTTATTCCAATAGAATAAACCAGGAATCTCGGACTGTGCATGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp TCATGGGGTAGAAGCCAAGAATCCAACACAGATCATCTGGAATTTCAGAACACGGGCGAAGTGGATGGGTaGGGAGTTGGCCGTCTTGTA +
Preference number: 4 (lower is better)
Translates to: SWGRSQESNTDHLEFQNTGEVDG*GVGRLV
Trigger: TACAAGACGGCCAACTCCTCACCCATCCACTTCGCC...CGTGTTCTGAAATTCCAGATGATCTGTGTTGGATTCTTGGCTTCTACCCCATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp ACACACACACACACACACACATCACACACAATTTCTTTGAGGAGAATCATGGGGGGCGAAGTGGATGGGTaGGGAGTTGGCCGTCTTGTA +
Preference number: 4 (lower is better)
Translates to: THTHTHTSHTISLRRIMGGEVDG*GVGRLV
Trigger: TACAAGACGGCCAACTCCTCACCCATCCACTTCGCC...CCCCATGATTCTCCTCAAAGAAATTGTGTGTGATGTGTGTGTGTGTGTGTGTGT
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp AGGGAGTCTCCTCGCATAAGCCACAAAGACACGTGGCAAAAAGCTGACATCTTTCCTTGTTTGCCACCATaGCATCCAGTGCTCTCCACT +
Preference number: 4 (lower is better)
Translates to: RESPRISHKDTWQKADIFPCLPP*HPVLST
Trigger: AGTGGAGAGCACTGGATGTCATGGTGGCAAACAAGG...AAAGATGTCAGCTTTTTGCCACGTGTCTTTGTGGCTTATGCGAGGAGACTCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GAAAATGCCTCACACAAGCACGTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCATATGCAGAACAGACTaGAAATGCCTCACACAAGCA +
Preference number: 4 (lower is better)
Translates to: ENASHKHVVSCPVASLETICRTD*KCLTQA
Trigger: TGCTTGTGTGAGGCATTTTCAGTCTGTTCTGCATAT...GGTTTCCAAGGAAGCCACAGGGCAGCTGACCACGTGCTTGTGTGAGGCATTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GAAAATGCCTCACACAAGCACGTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCCACACACAATTTCTTTaGGGAGAATCATGGGGTAGA +
Preference number: 4 (lower is better)
Translates to: ENASHKHVVSCPVASLETHTQFL*GESWGR
Trigger: TCTACCCCATGATTCTCCTCAAAGAAATTGTGTGTG...GGTTTCCAAGGAAGCCACAGGGCAGCTGACCACGTGCTTGTGTGAGGCATTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GGATTCTCGACCCAACACTGCCTGGGGAAATGGCTGTGGTTCTGCATGGAATGGTTTGGCAGCTCACTATaGGATTCAGGGGACATATAT +
Preference number: 4 (lower is better)
Translates to: GFSTQHCLGKWLWFCMEWFGSSL*DSGDIY
Trigger: ATATATGTCCCCTGAATCTCATAGTGAGCTGCCAAA...CCATTCCATGCAGAACCACAGCCATTTCCCCAGGCAGTGTTGGGTCGAGAATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp CTCGTGGGAGGAGGACAGCAAATGGCTGCCTTGTTTGCCACCATGACATCCAGTTTTGGCAGCTCACTATaGGATTCAGGGGACATATAT +
Preference number: 4 (lower is better)
Translates to: LVGGGQQMAALFATMTSSFGSSL*DSGDIY
Trigger: ATATATGTCCCCTGAATCTCATAGTGAGCTGCCAAA...ACTGGATGTCATGGTGGCAAACAAGGCAGCCATTTGCTGTCCTCCTCCCACGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GGGGTAGAAGCCAAGAATCCAACACAGATCATCTGGAATTTCAGAACACGGAGGAGGCCTTGTGGAACTTaGCCATGTAGAACTCCAGGC +
Preference number: 4 (lower is better)
Translates to: GVEAKNPTQIIWNFRTRRRPCGT*PCRTPG
Trigger: GCCTGGAGTTCTACATGGGCAAGTTCCACAAGGCCT...CCTCCGTGTTCTGAAATTCCAGATGATCTGTGTTGGATTCTTGGCTTCTACCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp CAGCAAACTAGTCAATCACAGAATTTCTTTTTAAGTAGGTCCCAGTTGTGTTGCGGGCTGGGGCCTCCTTaGCACAGGGGAAGTCACCCA +
Preference number: 4 (lower is better)
Translates to: QQTSQSQNFFLSRSQLCCGLGPP*HRGSHP
Trigger: TGGGTGACTTCCCCTGTGGCAAGGAGGCCCCAGCCC...GCAACACAACTGGGACCTACTTAAAAAGAAATTCTGTGATTGACTAGTTTGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp ACACACACACACACACACACATCACACACAATTTCTTTGAGGAGAATCATGGGGTCGGTGGCATTGGCCTaGTCATCACAGGCCTGGTTG +
Preference number: 4 (lower is better)
Translates to: THTHTHTSHTISLRRIMGSVALA*SSQAWL
Trigger: CAACCAGGCCTGTGATGAGCAGGCCAATGCCACCGA...CCCCATGATTCTCCTCAAAGAAATTGTGTGTGATGTGTGTGTGTGTGTGTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp TCATGGGGTAGAAGCCAAGAATCCAACACAGATCATCTGGAATTTCAGAACACGCAGCTTGATCTCCAGTaGCGTCCGGATGAGGGCCAT +
Preference number: 4 (lower is better)
Translates to: SWGRSQESNTDHLEFQNTQLDLQ*RPDEGH
Trigger: ATGGCCCTCATCCGGACGGCACTGGAGATCAAGCTG...CGTGTTCTGAAATTCCAGATGATCTGTGTTGGATTCTTGGCTTCTACCCCATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GGGGTAGAAGCCAAGAATCCAACACAGATCATCTGGAATTTCAGAACACGGAGGGGCTTGCTACCTGGCTaGCATCGCGAGTACTTTTCA +
Preference number: 4 (lower is better)
Translates to: GVEAKNPTQIIWNFRTRRGLLPG*HREYFS
Trigger: TGAAAAGTACTCGCGATGGCAGCCAGGTAGCAAGCC...CCTCCGTGTTCTGAAATTCCAGATGATCTGTGTTGGATTCTTGGCTTCTACCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CTCGTGGGAGGAGGACAGCAAATGGCTGCCTTGTTTGCCACCATGACATCCAGTGGAACACCGTCAAGATaGCAAACAGGATATTGTCAA +
Preference number: 4 (lower is better)
Translates to: LVGGGQQMAALFATMTSSGTPSR*QTGYCQ
Trigger: TTGACAATATCCTGTTTGCCATCTTGACGGTGTTCC...ACTGGATGTCATGGTGGCAAACAAGGCAGCCATTTGCTGTCCTCCTCCCACGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGCATGCAGGCGGAACACCGTCAAGATaGCAAACAGGATATTGTCAA +
Preference number: 4 (lower is better)
Translates to: PVWMIKLIHWNTRLLHAGGTPSR*QTGYCQ
Trigger: TTGACAATATCCTGTTTGCCATCTTGACGGTGTTCC...GCCTGCATGCAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp AGGGAGTCTCCTCGCATAAGCCACAAAGACACGTGGCAAAAAGCTGACATCTTTTCTCCTCTTCATCCTTaGTCAGCTCTTGGGCGTTGG +
Preference number: 4 (lower is better)
Translates to: RESPRISHKDTWQKADIFSPLHP*SALGRW
Trigger: CCAACGCCCAAGAGCTGACCAAGGATGAAGAGGAGA...AAAGATGTCAGCTTTTTGCCACGTGTCTTTGTGGCTTATGCGAGGAGACTCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CAGCAAACTAGTCAATCACAGAATTTCTTTTTAAGTAGGTCCCAGTTGTGTTGCTTCTGCAGCCGTAGCTaGCTGGCCCGCTGCTCCCAC +
Preference number: 4 (lower is better)
Translates to: QQTSQSQNFFLSRSQLCCFCSRS*LARCSH
Trigger: GTGGGAGCAGCGGGCCAGCCAGCTACGGCTGCAGAA...GCAACACAACTGGGACCTACTTAAAAAGAAATTCTGTGATTGACTAGTTTGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp TCATGGGGTAGAAGCCAAGAATCCAACACAGATCATCTGGAATTTCAGAACACGTCTGGAGACAGGTGCTaGGCAGTGTGTGCATGGGAC +
Preference number: 4 (lower is better)
Translates to: SWGRSQESNTDHLEFQNTSGDRC*AVCAWD
Trigger: GTCCCATGCACACACTGCCCAGCACCTGTCTCCAGA...CGTGTTCTGAAATTCCAGATGATCTGTGTTGGATTCTTGGCTTCTACCCCATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp ACACACACACACACACACACATCACACACAATTTCTTTGAGGAGAATCATGGGGAATAGTGTTCGGGTCTaGGGGCTGACTGCCCATGCG +
Preference number: 4 (lower is better)
Translates to: THTHTHTSHTISLRRIMGNSVRV*GLTAHA
Trigger: CGCATGGGCAGTCAGCCCCCAGACCCGAACACTATT...CCCCATGATTCTCCTCAAAGAAATTGTGTGTGATGTGTGTGTGTGTGTGTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp TCATGGGGTAGAAGCCAAGAATCCAACACAGATCATCTGGAATTTCAGAACACGTCAGAGCGTTGTTCCTaGGCGAGTCTGTGCGCACTG +
Preference number: 4 (lower is better)
Translates to: SWGRSQESNTDHLEFQNTSERCS*ASLCAL
Trigger: CAGTGCGCACAGACTCGCCCAGGAACAACGCTCTGA...CGTGTTCTGAAATTCCAGATGATCTGTGTTGGATTCTTGGCTTCTACCCCATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp ACACACACACACACACACACATCACACACAATTTCTTTGAGGAGAATCATGGGGTGCTCATCACAGGCCTaGTTGCTCAGGCAGGACAGC +
Preference number: 4 (lower is better)
Translates to: THTHTHTSHTISLRRIMGCSSQA*LLRQDS
Trigger: GCTGTCCTGCCTGAGCAACCAGGCCTGTGATGAGCA...CCCCATGATTCTCCTCAAAGAAATTGTGTGTGATGTGTGTGTGTGTGTGTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGCATGCAGGCGTGCATCTGGTCTCTGGTaGTTTTGTTCTGCTTGTAGA +
Preference number: 4 (lower is better)
Translates to: RVDDKTHPLEHTPAACRRASGLW*FCSACR
Trigger: TCTACAAGCAGAACAAAACCACCAGAGACCAGATGC...ACGCCTGCATGCAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp TCTTCACCAAACAAGGGACCTCCCAGCATCTTGTGCACCTTGGACAGTGTCCTGGCATCTGGTCTCTGGTaGTTTTGTTCTGCTTGTAGA +
Preference number: 4 (lower is better)
Translates to: SSPNKGPPSILCTLDSVLASGLW*FCSACR
Trigger: TCTACAAGCAGAACAAAACCACCAGAGACCAGATGC...CAGGACACTGTCCAAGGTGCACAAGATGCTGGGAGGTCCCTTGTTTGGTGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CAGCAAACTAGTCAATCACAGAATTTCTTTTTAAGTAGGTCCCAGTTGTGTTGCGCTCCAGGGGTGGCCTaGCCTCATGGGGTGCATCCT +
Preference number: 4 (lower is better)
Translates to: QQTSQSQNFFLSRSQLCCAPGVA*PHGVHP
Trigger: AGGATGCACCCCATGAGGCCAGGCCACCCCTGGAGC...GCAACACAACTGGGACCTACTTAAAAAGAAATTCTGTGATTGACTAGTTTGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGCATGCAGGCAGCCACAAAGACACGTaGCAAAAAGCTGACATCTTT +
Preference number: 4 (lower is better)
Translates to: PVWMIKLIHWNTRLLHAGSHKDT*QKADIF
Trigger: AAAGATGTCAGCTTTTTGCCACGTGTCTTTGTGGCT...GCCTGCATGCAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CAGCAAACTAGTCAATCACAGAATTTCTTTTTAAGTAGGTCCCAGTTGTGTTGCCCTGCTCCCTGTGTCTaGCGCCAGGACAGTGCTGGG +
Preference number: 4 (lower is better)
Translates to: QQTSQSQNFFLSRSQLCCPAPCV*RQDSAG
Trigger: CCCAGCACTGTCCTGGCGCCAGACACAGGGAGCAGG...GCAACACAACTGGGACCTACTTAAAAAGAAATTCTGTGATTGACTAGTTTGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp TCACATGCACAGTCCGAGATTCCTGGTTTATTCTATTGGAATAAAATACTCTGTGGGCCCGCAGCACACTaGTCCCAAAGGAGCTTCCCG +
Preference number: 4 (lower is better)
Translates to: SHAQSEIPGLFYWNKILCGPAAH*SQRSFP
Trigger: CGGGAAGCTCCTTTGGGATCAGTGTGCTGCGGGCCC...ACAGAGTATTTTATTCCAATAGAATAAACCAGGAATCTCGGACTGTGCATGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GCTAGGCTGTGTGGGTTTAGAAAAGTGGATTCTCGACCCAACACTGCCTGGGGAACAGTGTCAGGACAATaGAGTAAAAGGACGAGAACA +
Preference number: 4 (lower is better)
Translates to: ARLCGFRKVDSRPNTAWGTVSGQ*SKRTRT
Trigger: TGTTCTCGTCCTTTTACTTCATTGTCCTGACACTGT...TCCCCAGGCAGTGTTGGGTCGAGAATCCACTTTTCTAAACCCACACAGCCTAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GCTAGGCTGTGTGGGTTTAGAAAAGTGGATTCTCGACCCAACACTGCCTGGGGAAGACAATCAAGATGTTaGGGACATTCTTCAGGGAGT +
Preference number: 4 (lower is better)
Translates to: ARLCGFRKVDSRPNTAWGRQSRC*GHSSGS
Trigger: ACTCCCTGAAGAATGTCCTCAACATCTTGATTGTCT...TCCCCAGGCAGTGTTGGGTCGAGAATCCACTTTTCTAAACCCACACAGCCTAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp TCACATGCACAGTCCGAGATTCCTGGTTTATTCTATTGGAATAAAATACTCTGTCCTGGCGGAGCAGCTTaGTCAGCCGCGCAGCTCGAA +
Preference number: 4 (lower is better)
Translates to: SHAQSEIPGLFYWNKILCPGGAA*SAAQLE
Trigger: TTCGAGCTGCGCGGCTGATCAAGCTGCTCCGCCAGG...ACAGAGTATTTTATTCCAATAGAATAAACCAGGAATCTCGGACTGTGCATGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp ACACACACACACACACACACATCACACACAATTTCTTTGAGGAGAATCATGGGGACATGTCATTGTAACTaGTGCGCCCACACGCAGCCG +
Preference number: 4 (lower is better)
Translates to: THTHTHTSHTISLRRIMGTCHCN*CAHTQP
Trigger: CGGCTGCGTGTGGGCGCATCAGTTACAATGACATGT...CCCCATGATTCTCCTCAAAGAAATTGTGTGTGATGTGTGTGTGTGTGTGTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp TCACATGCACAGTCCGAGATTCCTGGTTTATTCTATTGGAATAAAATACTCTGTCACAGCCAGTGCTCCTaGCCGCCCCACAGGGATCTC +
Preference number: 4 (lower is better)
Translates to: SHAQSEIPGLFYWNKILCHSQCS*PPHRDL
Trigger: GAGATCCCTGTGGGGCGGTCAGGAGCACTGGCTGTG...ACAGAGTATTTTATTCCAATAGAATAAACCAGGAATCTCGGACTGTGCATGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp TCACATGCACAGTCCGAGATTCCTGGTTTATTCTATTGGAATAAAATACTCTGTCACAGCATCCTGCGGTaGTGGATCCCGAGGCCTCGC +
Preference number: 4 (lower is better)
Translates to: SHAQSEIPGLFYWNKILCHSILR*WIPRPR
Trigger: GCGAGGCCTCGGGATCCATCACCGCAGGATGCTGTG...ACAGAGTATTTTATTCCAATAGAATAAACCAGGAATCTCGGACTGTGCATGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp CGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGCATGCAGGCGTCACACACAATTTCTTTaGGGAGAATCATGGGGTAGA +
Preference number: 4 (lower is better)
Translates to: RVDDKTHPLEHTPAACRRHTQFL*GESWGR
Trigger: TCTACCCCATGATTCTCCTCAAAGAAATTGTGTGTG...ACGCCTGCATGCAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp CAGCAAACTAGTCAATCACAGAATTTCTTTTTAAGTAGGTCCCAGTTGTGTTGCTCCTGGGCGAGTCTGTaGGCACTGGGTCCTCAGCAG +
Preference number: 4 (lower is better)
Translates to: QQTSQSQNFFLSRSQLCCSWASL*ALGPQQ
Trigger: CTGCTGAGGACCCAGTGCGCACAGACTCGCCCAGGA...GCAACACAACTGGGACCTACTTAAAAAGAAATTCTGTGATTGACTAGTTTGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GAAAATGCCTCACACAAGCACGTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCCCTTGGATTCATCTGTaGAGTAGAAAAACTTCCCTT +
Preference number: 4 (lower is better)
Translates to: ENASHKHVVSCPVASLETPWIHL*SRKTSL
Trigger: AAGGGAAGTTTTTCTACTGCACAGATGAATCCAAGG...GGTTTCCAAGGAAGCCACAGGGCAGCTGACCACGTGCTTGTGTGAGGCATTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp TCACATGCACAGTCCGAGATTCCTGGTTTATTCTATTGGAATAAAATACTCTGTCGGCCACGTGAAGGGTaGTCCCCACAGGACGCAGAG +
Preference number: 4 (lower is better)
Translates to: SHAQSEIPGLFYWNKILCRPREG*SPQDAE
Trigger: CTCTGCGTCCTGTGGGGAGCACCCTTCACGTGGCCG...ACAGAGTATTTTATTCCAATAGAATAAACCAGGAATCTCGGACTGTGCATGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp CAGCAAACTAGTCAATCACAGAATTTCTTTTTAAGTAGGTCCCAGTTGTGTTGCTGGACCGGACAGGGCTaGACAGGGAGTCTCCTCGCA +
Preference number: 4 (lower is better)
Translates to: QQTSQSQNFFLSRSQLCCWTGQG*TGSLLA
Trigger: TGCGAGGAGACTCCCTGTGCAGCCCTGTCCGGTCCA...GCAACACAACTGGGACCTACTTAAAAAGAAATTCTGTGATTGACTAGTTTGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GGGGTAGAAGCCAAGAATCCAACACAGATCATCTGGAATTTCAGAACACGGAGGAATGGCTGCCTTGTTTaGCACCATGACATCCAGTGC +
Preference number: 4 (lower is better)
Translates to: GVEAKNPTQIIWNFRTRRNGCLV*HHDIQC
Trigger: GCACTGGATGTCATGGTGGCAAACAAGGCAGCCATT...CCTCCGTGTTCTGAAATTCCAGATGATCTGTGTTGGATTCTTGGCTTCTACCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp TCATGGGGTAGAAGCCAAGAATCCAACACAGATCATCTGGAATTTCAGAACACGCCTCCCAGCATCTTGTaGACCTTGGACAGTGTCCTG +
Preference number: 4 (lower is better)
Translates to: SWGRSQESNTDHLEFQNTPPSIL*TLDSVL
Trigger: CAGGACACTGTCCAAGGTGCACAAGATGCTGGGAGG...CGTGTTCTGAAATTCCAGATGATCTGTGTTGGATTCTTGGCTTCTACCCCATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp CTCGTGGGAGGAGGACAGCAAATGGCTGCCTTGTTTGCCACCATGACATCCAGTATCAACTGCTCTAAATaGTCCCTTTCTTCACCAAAC +
Preference number: 4 (lower is better)
Translates to: LVGGGQQMAALFATMTSSINCSK*SLSSPN
Trigger: GTTTGGTGAAGAAAGGGAGCATTTAGAGCAGTTGAT...ACTGGATGTCATGGTGGCAAACAAGGCAGCCATTTGCTGTCCTCCTCCCACGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GAAAATGCCTCACACAAGCACGTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCATCAACTGCTCTAAATaGTCCCTTTCTTCACCAAAC +
Preference number: 4 (lower is better)
Translates to: ENASHKHVVSCPVASLETINCSK*SLSSPN
Trigger: GTTTGGTGAAGAAAGGGAGCATTTAGAGCAGTTGAT...GGTTTCCAAGGAAGCCACAGGGCAGCTGACCACGTGCTTGTGTGAGGCATTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp AGACTGAAAATGCCTCACACAAGCACGTGGTCAGCTGCCCTGTGGCTTCCTTGGAGTTTCAGAGTGTTGTaGCTTCAGGTAAGGAAATTC +
Preference number: 4 (lower is better)
Translates to: RLKMPHTSTWSAALWLPWSFRVL*LQVRKF
Trigger: GAATTTCCTTACCTGAAGGCACAACACTCTGAAACT...CCAAGGAAGCCACAGGGCAGCTGACCACGTGCTTGTGTGAGGCATTTTCAGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp TCATGGGGTAGAAGCCAAGAATCCAACACAGATCATCTGGAATTTCAGAACACGTTCTCGACCCAACACTaGCTGGGGAAATGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: SWGRSQESNTDHLEFQNTFSTQH*LGKWLW
Trigger: CCACAGCCATTTCCCCAGGCAGTGTTGGGTCGAGAA...CGTGTTCTGAAATTCCAGATGATCTGTGTTGGATTCTTGGCTTCTACCCCATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp AGGGAGTCTCCTCGCATAAGCCACAAAGACACGTGGCAAAAAGCTGACATCTTTCACCACCTGCAAACTTaGAATCCCAGACACCAGCTT +
Preference number: 4 (lower is better)
Translates to: RESPRISHKDTWQKADIFHHLQT*NPRHQL
Trigger: AAGCTGGTGTCTGGGATTCCAAGTTTGCAGGTGGTG...AAAGATGTCAGCTTTTTGCCACGTGTCTTTGTGGCTTATGCGAGGAGACTCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp ACACACACACACACACACACATCACACACAATTTCTTTGAGGAGAATCATGGGGACCGGAAGTAGCTTCTaGGCCCCAGGCCATACATCT +
Preference number: 4 (lower is better)
Translates to: THTHTHTSHTISLRRIMGTGSSF*APGHTS
Trigger: AGATGTATGGCCTGGGGCCCAGAAGCTACTTCCGGT...CCCCATGATTCTCCTCAAAGAAATTGTGTGTGATGTGTGTGTGTGTGTGTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp TCATGGGGTAGAAGCCAAGAATCCAACACAGATCATCTGGAATTTCAGAACACGCAGTCACAGTCCCACTaGTCTCCAGGTCACAGTGTG +
Preference number: 4 (lower is better)
Translates to: SWGRSQESNTDHLEFQNTQSQSH*SPGHSV
Trigger: CACACTGTGACCTGGAGACCAGTGGGACTGTGACTG...CGTGTTCTGAAATTCCAGATGATCTGTGTTGGATTCTTGGCTTCTACCCCATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GGGGTAGAAGCCAAGAATCCAACACAGATCATCTGGAATTTCAGAACACGGAGGCCCTCTCCAGCTCCTTaGATTCATCTGTGCAGTAGA +
Preference number: 4 (lower is better)
Translates to: GVEAKNPTQIIWNFRTRRPSPAP*IHLCSR
Trigger: TCTACTGCACAGATGAATCCAAGGAGCTGGAGAGGG...CCTCCGTGTTCTGAAATTCCAGATGATCTGTGTTGGATTCTTGGCTTCTACCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GGGGTAGAAGCCAAGAATCCAACACAGATCATCTGGAATTTCAGAACACGGAGGGTCCACGTCTTATACTaGAACGACTGCCGGTTTTGG +
Preference number: 4 (lower is better)
Translates to: GVEAKNPTQIIWNFRTRRVHVLY*NDCRFW
Trigger: CCAAAACCGGCAGTCGTTCCAGTATAAGACGTGGAC...CCTCCGTGTTCTGAAATTCCAGATGATCTGTGTTGGATTCTTGGCTTCTACCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GGGGTAGAAGCCAAGAATCCAACACAGATCATCTGGAATTTCAGAACACGGAGGTGTCCTCGTTGGAGATaGGCATGTTCATGCGAACCA +
Preference number: 4 (lower is better)
Translates to: GVEAKNPTQIIWNFRTRRCPRWR*ACSCEP
Trigger: TGGTTCGCATGAACATGCCCATCTCCAACGAGGACA...CCTCCGTGTTCTGAAATTCCAGATGATCTGTGTTGGATTCTTGGCTTCTACCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp ACACACACACACACACACACATCACACACAATTTCTTTGAGGAGAATCATGGGGGCCGGCTGCCCCGTGTaGATGATAAAACTCATCCAC +
Preference number: 4 (lower is better)
Translates to: THTHTHTSHTISLRRIMGAGCPV*MIKLIH
Trigger: GTGGATGAGTTTTATCATCCACACGGGGCAGCCGGC...CCCCATGATTCTCCTCAAAGAAATTGTGTGTGATGTGTGTGTGTGTGTGTGTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp ACACACACACACACACACACATCACACACAATTTCTTTGAGGAGAATCATGGGGTTAGGGTCTGGTGTGTaGTACGAGACCCAGGAAGGC +
Preference number: 4 (lower is better)
Translates to: THTHTHTSHTISLRRIMGLGSGV*YETQEG
Trigger: GCCTTCCTGGGTCTCGTACCACACACCAGACCCTAA...CCCCATGATTCTCCTCAAAGAAATTGTGTGTGATGTGTGTGTGTGTGTGTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp TCATGGGGTAGAAGCCAAGAATCCAACACAGATCATCTGGAATTTCAGAACACGCTGCGGTTTAGGGTCTaGTGTGTGGTACGAGACCCA +
Preference number: 4 (lower is better)
Translates to: SWGRSQESNTDHLEFQNTLRFRV*CVVRDP
Trigger: TGGGTCTCGTACCACACACCAGACCCTAAACCGCAG...CGTGTTCTGAAATTCCAGATGATCTGTGTTGGATTCTTGGCTTCTACCCCATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CAGCAAACTAGTCAATCACAGAATTTCTTTTTAAGTAGGTCCCAGTTGTGTTGCCGGCGCACTTTCAGGTaGGCCCTGCTTCTCTGTGCC +
Preference number: 4 (lower is better)
Translates to: QQTSQSQNFFLSRSQLCCRRTFR*ALLLCA
Trigger: GGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCG...GCAACACAACTGGGACCTACTTAAAAAGAAATTCTGTGATTGACTAGTTTGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CTCGTGGGAGGAGGACAGCAAATGGCTGCCTTGTTTGCCACCATGACATCCAGTCTCTTCTGCTGTATGTaGAAGGAAACCTATTTCACA +
Preference number: 4 (lower is better)
Translates to: LVGGGQQMAALFATMTSSLFCCM*KETYFT
Trigger: TGTGAAATAGGTTTCCTTCCACATACAGCAGAAGAG...ACTGGATGTCATGGTGGCAAACAAGGCAGCCATTTGCTGTCCTCCTCCCACGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp TCATGGGGTAGAAGCCAAGAATCCAACACAGATCATCTGGAATTTCAGAACACGCGACCCAACACTGCCTaGGGAAATGGCTGTGGTTCT +
Preference number: 4 (lower is better)
Translates to: SWGRSQESNTDHLEFQNTRPNTA*GNGCGS
Trigger: AGAACCACAGCCATTTCCCCAGGCAGTGTTGGGTCG...CGTGTTCTGAAATTCCAGATGATCTGTGTTGGATTCTTGGCTTCTACCCCATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp ACACACACACACACACACACATCACACACAATTTCTTTGAGGAGAATCATGGGGCAAAGTCGAAGCAGTTaGAGGAGGACCGGAAGTAGC +
Preference number: 4 (lower is better)
Translates to: THTHTHTSHTISLRRIMGQSRSS*RRTGSS
Trigger: GCTACTTCCGGTCCTCCTTCAACTGCTTCGACTTTG...CCCCATGATTCTCCTCAAAGAAATTGTGTGTGATGTGTGTGTGTGTGTGTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GGGGTAGAAGCCAAGAATCCAACACAGATCATCTGGAATTTCAGAACACGGAGGCCGGAGAAGACACAGTaGGAAACAAAACCCAAAGTC +
Preference number: 4 (lower is better)
Translates to: GVEAKNPTQIIWNFRTRRPEKTQ*ETKPKV
Trigger: GACTTTGGGTTTTGTTTCTCACTGTGTCTTCTCCGG...CCTCCGTGTTCTGAAATTCCAGATGATCTGTGTTGGATTCTTGGCTTCTACCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp TCATGGGGTAGAAGCCAAGAATCCAACACAGATCATCTGGAATTTCAGAACACGAACAGCACAGAGATCTaGAAACCGGTCCTCTCCCTC +
Preference number: 4 (lower is better)
Translates to: SWGRSQESNTDHLEFQNTNSTEI*KPVLSL
Trigger: GAGGGAGAGGACCGGTTTGCAGATCTCTGTGCTGTT...CGTGTTCTGAAATTCCAGATGATCTGTGTTGGATTCTTGGCTTCTACCCCATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp ACACACACACACACACACACATCACACACAATTTCTTTGAGGAGAATCATGGGGAACAGCACAGAGATCTaGAAACCGGTCCTCTCCCTC +
Preference number: 4 (lower is better)
Translates to: THTHTHTSHTISLRRIMGNSTEI*KPVLSL
Trigger: GAGGGAGAGGACCGGTTTGCAGATCTCTGTGCTGTT...CCCCATGATTCTCCTCAAAGAAATTGTGTGTGATGTGTGTGTGTGTGTGTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp CAGCAAACTAGTCAATCACAGAATTTCTTTTTAAGTAGGTCCCAGTTGTGTTGCCCGGCCCCACAGCACTaGTTGGTGCGCCATCCATAT +
Preference number: 4 (lower is better)
Translates to: QQTSQSQNFFLSRSQLCCPAPQH*LVRHPY
Trigger: ATATGGATGGCGCACCAAGCAGTGCTGTGGGGCCGG...GCAACACAACTGGGACCTACTTAAAAAGAAATTCTGTGATTGACTAGTTTGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp ACACACACACACACACACACATCACACACAATTTCTTTGAGGAGAATCATGGGGCACCTGTACAGGCACTaGATCTCCTGTGACACAGAC +
Preference number: 4 (lower is better)
Translates to: THTHTHTSHTISLRRIMGHLYRH*ISCDTD
Trigger: GTCTGTGTCACAGGAGATGCAGTGCCTGTACAGGTG...CCCCATGATTCTCCTCAAAGAAATTGTGTGTGATGTGTGTGTGTGTGTGTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp AGGGAGTCTCCTCGCATAAGCCACAAAGACACGTGGCAAAAAGCTGACATCTTTCTTCAGCCACTTCTTTaGCCTTTTGCAGAGCAAGCT +
Preference number: 4 (lower is better)
Translates to: RESPRISHKDTWQKADIFLQPLL*PFAEQA
Trigger: AGCTTGCTCTGCAAAAGGCCAAAGAAGTGGCTGAAG...AAAGATGTCAGCTTTTTGCCACGTGTCTTTGTGGCTTATGCGAGGAGACTCCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp TCATGGGGTAGAAGCCAAGAATCCAACACAGATCATCTGGAATTTCAGAACACGGTCCGGAAGTTGTTGTaGCGGTTGATGCTGGTGTCA +
Preference number: 4 (lower is better)
Translates to: SWGRSQESNTDHLEFQNTVRKLL*RLMLVS
Trigger: TGACACCAGCATCAACCGCCACAACAACTTCCGGAC...CGTGTTCTGAAATTCCAGATGATCTGTGTTGGATTCTTGGCTTCTACCCCATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp AGGGAGTCTCCTCGCATAAGCCACAAAGACACGTGGCAAAAAGCTGACATCTTTGCTGCATCTGGTCTCTaGTGGTTTTGTTCTGCTTGT +
Preference number: 4 (lower is better)
Translates to: RESPRISHKDTWQKADIFAASGL*WFCSAC
Trigger: ACAAGCAGAACAAAACCACCAGAGACCAGATGCAGC...AAAGATGTCAGCTTTTTGCCACGTGTCTTTGTGGCTTATGCGAGGAGACTCCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp TCACATGCACAGTCCGAGATTCCTGGTTTATTCTATTGGAATAAAATACTCTGTTCCTCAGGCAGGGCGTaGACAGAGGCCTCACTGTCC +
Preference number: 4 (lower is better)
Translates to: SHAQSEIPGLFYWNKILCSSGRA*TEASLS
Trigger: GGACAGTGAGGCCTCTGTCCACGCCCTGCCTGAGGA...ACAGAGTATTTTATTCCAATAGAATAAACCAGGAATCTCGGACTGTGCATGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp TCACATGCACAGTCCGAGATTCCTGGTTTATTCTATTGGAATAAAATACTCTGTAGCGGCCCGAGTTGGTaGCCACAGCCTCCTCGAAAG +
Preference number: 4 (lower is better)
Translates to: SHAQSEIPGLFYWNKILCSGPSW*PQPPRK
Trigger: CTTTCGAGGAGGCTGTGGCCACCAACTCGGGCCGCT...ACAGAGTATTTTATTCCAATAGAATAAACCAGGAATCTCGGACTGTGCATGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp TCTTCACCAAACAAGGGACCTCCCAGCATCTTGTGCACCTTGGACAGTGTCCTGCTCTTCTGCTGTATGTaGAAGGAAACCTATTTCACA +
Preference number: 4 (lower is better)
Translates to: SSPNKGPPSILCTLDSVLLFCCM*KETYFT
Trigger: TGTGAAATAGGTTTCCTTCCACATACAGCAGAAGAG...CAGGACACTGTCCAAGGTGCACAAGATGCTGGGAGGTCCCTTGTTTGGTGAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp AGGGAGTCTCCTCGCATAAGCCACAAAGACACGTGGCAAAAAGCTGACATCTTTTGGTTCTGCATGGAATaGACACATTCGACACCCAAG +
Preference number: 4 (lower is better)
Translates to: RESPRISHKDTWQKADIFWFCME*THSTPK
Trigger: CTTGGGTGTCGAATGTGTCCATTCCATGCAGAACCA...AAAGATGTCAGCTTTTTGCCACGTGTCTTTGTGGCTTATGCGAGGAGACTCCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp AGACTGAAAATGCCTCACACAAGCACGTGGTCAGCTGCCCTGTGGCTTCCTTGGGCAGAATCCAAAGTTTaGCTGATAAATATGACTCAG +
Preference number: 4 (lower is better)
Translates to: RLKMPHTSTWSAALWLPWAESKV*LINMTQ
Trigger: CTGAGTCATATTTATCAGCCAAACTTTGGATTCTGC...CCAAGGAAGCCACAGGGCAGCTGACCACGTGCTTGTGTGAGGCATTTTCAGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GGGGTAGAAGCCAAGAATCCAACACAGATCATCTGGAATTTCAGAACACGGAGGAGGAGACAGACTCTTTaGTGCCACTCTCTTGGTTTT +
Preference number: 4 (lower is better)
Translates to: GVEAKNPTQIIWNFRTRRRRQTL*CHSLGF
Trigger: AAAACCAAGAGAGTGGCATCAAAGAGTCTGTCTCCT...CCTCCGTGTTCTGAAATTCCAGATGATCTGTGTTGGATTCTTGGCTTCTACCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp AGGGAGTCTCCTCGCATAAGCCACAAAGACACGTGGCAAAAAGCTGACATCTTTAGGAGACAGACTCTTTaGTGCCACTCTCTTGGTTTT +
Preference number: 4 (lower is better)
Translates to: RESPRISHKDTWQKADIFRRQTL*CHSLGF
Trigger: AAAACCAAGAGAGTGGCATCAAAGAGTCTGTCTCCT...AAAGATGTCAGCTTTTTGCCACGTGTCTTTGTGGCTTATGCGAGGAGACTCCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp CAGCAAACTAGTCAATCACAGAATTTCTTTTTAAGTAGGTCCCAGTTGTGTTGCCAGAGCTTGCCTGAGTaGGCATTCGCTGACACTGGC +
Preference number: 4 (lower is better)
Translates to: QQTSQSQNFFLSRSQLCCQSLPE*AFADTG
Trigger: GCCAGTGTCAGCGAATGCTCACTCAGGCAAGCTCTG...GCAACACAACTGGGACCTACTTAAAAAGAAATTCTGTGATTGACTAGTTTGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GGGGTAGAAGCCAAGAATCCAACACAGATCATCTGGAATTTCAGAACACGGAGGCACGTGGCAAAAAGCTaGCATCTTTCTTTCACAGGT +
Preference number: 4 (lower is better)
Translates to: GVEAKNPTQIIWNFRTRRHVAKS*HLSFTG
Trigger: ACCTGTGAAAGAAAGATGTCAGCTTTTTGCCACGTG...CCTCCGTGTTCTGAAATTCCAGATGATCTGTGTTGGATTCTTGGCTTCTACCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp AGGGAGTCTCCTCGCATAAGCCACAAAGACACGTGGCAAAAAGCTGACATCTTTCACGTGGCAAAAAGCTaGCATCTTTCTTTCACAGGT +
Preference number: 4 (lower is better)
Translates to: RESPRISHKDTWQKADIFHVAKS*HLSFTG
Trigger: ACCTGTGAAAGAAAGATGTCAGCTTTTTGCCACGTG...AAAGATGTCAGCTTTTTGCCACGTGTCTTTGTGGCTTATGCGAGGAGACTCCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp TCATGGGGTAGAAGCCAAGAATCCAACACAGATCATCTGGAATTTCAGAACACGATGACATCCACACACTaGACACACCTGTACAGGCAC +
Preference number: 4 (lower is better)
Translates to: SWGRSQESNTDHLEFQNTMTSTH*THLYRH
Trigger: GTGCCTGTACAGGTGTGTTCAGTGTGTGGATGTCAT...CGTGTTCTGAAATTCCAGATGATCTGTGTTGGATTCTTGGCTTCTACCCCATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp CAGCAAACTAGTCAATCACAGAATTTCTTTTTAAGTAGGTCCCAGTTGTGTTGCGTGCTGGGCAGTGTGTaGATGGGACCCACAGTCACA +
Preference number: 4 (lower is better)
Translates to: QQTSQSQNFFLSRSQLCCVLGSV*MGPTVT
Trigger: TGTGACTGTGGGTCCCATGCACACACTGCCCAGCAC...GCAACACAACTGGGACCTACTTAAAAAGAAATTCTGTGATTGACTAGTTTGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp CAGCAAACTAGTCAATCACAGAATTTCTTTTTAAGTAGGTCCCAGTTGTGTTGCCCTTCTGGAGACAGGTaGTGGGCAGTGTGTGCATGG +
Preference number: 4 (lower is better)
Translates to: QQTSQSQNFFLSRSQLCCPSGDR*WAVCAW
Trigger: CCATGCACACACTGCCCAGCACCTGTCTCCAGAAGG...GCAACACAACTGGGACCTACTTAAAAAGAAATTCTGTGATTGACTAGTTTGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp CAGCAAACTAGTCAATCACAGAATTTCTTTTTAAGTAGGTCCCAGTTGTGTTGCAGATGGACAGCTCCATaGGGTACCCAGGGCTTGGAC +
Preference number: 4 (lower is better)
Translates to: QQTSQSQNFFLSRSQLCCRWTAP*GTQGLD
Trigger: GTCCAAGCCCTGGGTACCGCATGGAGCTGTCCATCT...GCAACACAACTGGGACCTACTTAAAAAGAAATTCTGTGATTGACTAGTTTGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp CAGCAAACTAGTCAATCACAGAATTTCTTTTTAAGTAGGTCCCAGTTGTGTTGCTCGGTGGCATTGGCCTaGTCATCACAGGCCTGGTTG +
Preference number: 4 (lower is better)
Translates to: QQTSQSQNFFLSRSQLCCSVALA*SSQAWL
Trigger: CAACCAGGCCTGTGATGAGCAGGCCAATGCCACCGA...GCAACACAACTGGGACCTACTTAAAAAGAAATTCTGTGATTGACTAGTTTGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp CAGCAAACTAGTCAATCACAGAATTTCTTTTTAAGTAGGTCCCAGTTGTGTTGCCAGCTTGATCTCCAGTaGCGTCCGGATGAGGGCCAT +
Preference number: 4 (lower is better)
Translates to: QQTSQSQNFFLSRSQLCCQLDLQ*RPDEGH
Trigger: ATGGCCCTCATCCGGACGGCACTGGAGATCAAGCTG...GCAACACAACTGGGACCTACTTAAAAAGAAATTCTGTGATTGACTAGTTTGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp TCACATGCACAGTCCGAGATTCCTGGTTTATTCTATTGGAATAAAATACTCTGTACAGCCGGCTGTGTCTaGTCCAGGGTGGCCTTCAGA +
Preference number: 4 (lower is better)
Translates to: SHAQSEIPGLFYWNKILCTAGCV*SRVAFR
Trigger: TCTGAAGGCCACCCTGGAGCAGACACAGCCGGCTGT...ACAGAGTATTTTATTCCAATAGAATAAACCAGGAATCTCGGACTGTGCATGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp TCACATGCACAGTCCGAGATTCCTGGTTTATTCTATTGGAATAAAATACTCTGTCTGAGGGGGTCTCTCTaGAGCAGGGCGTTGTGTTCG +
Preference number: 4 (lower is better)
Translates to: SHAQSEIPGLFYWNKILCLRGSL*SRALCS
Trigger: CGAACACAACGCCCTGCTGCAGAGAGACCCCCTCAG...ACAGAGTATTTTATTCCAATAGAATAAACCAGGAATCTCGGACTGTGCATGTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp TCATGGGGTAGAAGCCAAGAATCCAACACAGATCATCTGGAATTTCAGAACACGGATCATATACTCGAATaGAGGCCACTCGGTGATGCG +
Preference number: 4 (lower is better)
Translates to: SWGRSQESNTDHLEFQNTDHILE*RPLGDA
Trigger: CGCATCACCGAGTGGCCTCCATTCGAGTATATGATC...CGTGTTCTGAAATTCCAGATGATCTGTGTTGGATTCTTGGCTTCTACCCCATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp TCACATGCACAGTCCGAGATTCCTGGTTTATTCTATTGGAATAAAATACTCTGTGCCAAAGTTGGGTCCTaGCCAGTACTCCCGGCACTC +
Preference number: 4 (lower is better)
Translates to: SHAQSEIPGLFYWNKILCAKVGS*PVLPAL
Trigger: GAGTGCCGGGAGTACTGGCCAGGACCCAACTTTGGC...ACAGAGTATTTTATTCCAATAGAATAAACCAGGAATCTCGGACTGTGCATGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp TCACATGCACAGTCCGAGATTCCTGGTTTATTCTATTGGAATAAAATACTCTGTCCCTCTCTCGCTCCTTaGCAAACTCCCCCGAGAGCA +
Preference number: 4 (lower is better)
Translates to: SHAQSEIPGLFYWNKILCPSLAP*QTPPRA
Trigger: TGCTCTCGGGGGAGTTTGCCAAGGAGCGAGAGAGGG...ACAGAGTATTTTATTCCAATAGAATAAACCAGGAATCTCGGACTGTGCATGTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp TCATGGGGTAGAAGCCAAGAATCCAACACAGATCATCTGGAATTTCAGAACACGCATTTCTGCTCTTCTTaGTGGCCGCTCTCTTCAGCA +
Preference number: 4 (lower is better)
Translates to: SWGRSQESNTDHLEFQNTHFCSS*WPLSSA
Trigger: TGCTGAAGAGAGCGGCCACCAAGAAGAGCAGAAATG...CGTGTTCTGAAATTCCAGATGATCTGTGTTGGATTCTTGGCTTCTACCCCATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp TCATGGGGTAGAAGCCAAGAATCCAACACAGATCATCTGGAATTTCAGAACACGGGAAGGTGTCGAAGTTaGTTGTGGGAGTCTCATCCT +
Preference number: 4 (lower is better)
Translates to: SWGRSQESNTDHLEFQNTGRCRS*LWESHP
Trigger: AGGATGAGACTCCCACAACCAACTTCGACACCTTCC...CGTGTTCTGAAATTCCAGATGATCTGTGTTGGATTCTTGGCTTCTACCCCATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp TCACATGCACAGTCCGAGATTCCTGGTTTATTCTATTGGAATAAAATACTCTGTCCGAGTTCTGCTGCCTaGCGGCGATGGAGATGTTCG +
Preference number: 4 (lower is better)
Translates to: SHAQSEIPGLFYWNKILCPSSAA*RRWRCS
Trigger: CGAACATCTCCATCGCCGCCAGGCAGCAGAACTCGG...ACAGAGTATTTTATTCCAATAGAATAAACCAGGAATCTCGGACTGTGCATGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CAGCAAACTAGTCAATCACAGAATTTCTTTTTAAGTAGGTCCCAGTTGTGTTGCTGGGCAGTGTGTGCATaGGACCCACAGTCACAGTCC +
Preference number: 4 (lower is better)
Translates to: QQTSQSQNFFLSRSQLCCWAVCA*DPQSQS
Trigger: GGACTGTGACTGTGGGTCCCATGCACACACTGCCCA...GCAACACAACTGGGACCTACTTAAAAAGAAATTCTGTGATTGACTAGTTTGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp TCACATGCACAGTCCGAGATTCCTGGTTTATTCTATTGGAATAAAATACTCTGTGGTCCACGTTACCACTaGGAACGACCGTGGCTTCCC +
Preference number: 4 (lower is better)
Translates to: SHAQSEIPGLFYWNKILCGPRYH*ERPWLP
Trigger: GGGAAGCCACGGTCGTTCCCAGTGGTAACGTGGACC...ACAGAGTATTTTATTCCAATAGAATAAACCAGGAATCTCGGACTGTGCATGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp ACACACACACACACACACACATCACACACAATTTCTTTGAGGAGAATCATGGGGTCTTCTGGGGCAGATTaGCCCACACAACGGAAATCT +
Preference number: 4 (lower is better)
Translates to: THTHTHTSHTISLRRIMGSSGAD*PTQRKS
Trigger: AGATTTCCGTTGTGTGGGCCAATCTGCCCCAGAAGA...CCCCATGATTCTCCTCAAAGAAATTGTGTGTGATGTGTGTGTGTGTGTGTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp TCATGGGGTAGAAGCCAAGAATCCAACACAGATCATCTGGAATTTCAGAACACGATCTCATCAGGCTTATaGGGTGGTACCAGCAAGTCC +
Preference number: 4 (lower is better)
Translates to: SWGRSQESNTDHLEFQNTISSGL*GGTSKS
Trigger: GGACTTGCTGGTACCACCCCATAAGCCTGATGAGAT...CGTGTTCTGAAATTCCAGATGATCTGTGTTGGATTCTTGGCTTCTACCCCATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp AGGGAGTCTCCTCGCATAAGCCACAAAGACACGTGGCAAAAAGCTGACATCTTTACAGTGTCAGGACAATaGAGTAAAAGGACGAGAACA +
Preference number: 4 (lower is better)
Translates to: RESPRISHKDTWQKADIFTVSGQ*SKRTRT
Trigger: TGTTCTCGTCCTTTTACTTCATTGTCCTGACACTGT...AAAGATGTCAGCTTTTTGCCACGTGTCTTTGTGGCTTATGCGAGGAGACTCCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp TCACATGCACAGTCCGAGATTCCTGGTTTATTCTATTGGAATAAAATACTCTGTCGAGTGACGTTCCGCTaGTTGTCTGCATCCTCTGGC +
Preference number: 4 (lower is better)
Translates to: SHAQSEIPGLFYWNKILCRVTFR*LSASSG
Trigger: GCCAGAGGATGCAGACAATCAGCGGAACGTCACTCG...ACAGAGTATTTTATTCCAATAGAATAAACCAGGAATCTCGGACTGTGCATGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp TCATGGGGTAGAAGCCAAGAATCCAACACAGATCATCTGGAATTTCAGAACACGCATTCCAGGCATCTCTaGAATAGTTCAGCACCCCAA +
Preference number: 4 (lower is better)
Translates to: SWGRSQESNTDHLEFQNTHSRHL*NSSAPQ
Trigger: TTGGGGTGCTGAACTATTTCAGAGATGCCTGGAATG...CGTGTTCTGAAATTCCAGATGATCTGTGTTGGATTCTTGGCTTCTACCCCATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp CAGCAAACTAGTCAATCACAGAATTTCTTTTTAAGTAGGTCCCAGTTGTGTTGCCTCGGTCACTTGCTCTaGGTTTCATTCCAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: QQTSQSQNFFLSRSQLCCLGHLL*VSFQLG
Trigger: CCCCAGCTGGAATGAAACTCAGAGCAAGTGACCGAG...GCAACACAACTGGGACCTACTTAAAAAGAAATTCTGTGATTGACTAGTTTGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp GGGGTAGAAGCCAAGAATCCAACACAGATCATCTGGAATTTCAGAACACGGAGGCACACACAATTTCTTTaGGGAGAATCATGGGGTAGA +
Preference number: 4 (lower is better)
Translates to: GVEAKNPTQIIWNFRTRRHTQFL*GESWGR
Trigger: TCTACCCCATGATTCTCCTCAAAGAAATTGTGTGTG...CCTCCGTGTTCTGAAATTCCAGATGATCTGTGTTGGATTCTTGGCTTCTACCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp TCACATGCACAGTCCGAGATTCCTGGTTTATTCTATTGGAATAAAATACTCTGTTGGTCACAATCATGCTaGACCCCGAGACCAGGCAGC +
Preference number: 4 (lower is better)
Translates to: SHAQSEIPGLFYWNKILCWSQSC*TPRPGS
Trigger: GCTGCCTGGTCTCGGGGTTCAGCATGATTGTGACCA...ACAGAGTATTTTATTCCAATAGAATAAACCAGGAATCTCGGACTGTGCATGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp TCACATGCACAGTCCGAGATTCCTGGTTTATTCTATTGGAATAAAATACTCTGTAGGGGACTTCTCCTCTaGATTCCTGTCCTCCTCGGC +
Preference number: 4 (lower is better)
Translates to: SHAQSEIPGLFYWNKILCRGLLL*IPVLLG
Trigger: GCCGAGGAGGACAGGAATGCAGAGGAGAAGTCCCCT...ACAGAGTATTTTATTCCAATAGAATAAACCAGGAATCTCGGACTGTGCATGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp CAGCAAACTAGTCAATCACAGAATTTCTTTTTAAGTAGGTCCCAGTTGTGTTGCCCAAATACTGACCCCTaGAGTCCCTCTCCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: QQTSQSQNFFLSRSQLCCPNTDP*SPSPAP
Trigger: AGGAGCTGGAGAGGGACTGCAGGGGTCAGTATTTGG...GCAACACAACTGGGACCTACTTAAAAAGAAATTCTGTGATTGACTAGTTTGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp TCATGGGGTAGAAGCCAAGAATCCAACACAGATCATCTGGAATTTCAGAACACGTTATACTGGAACGACTaGCGGTTTTGGGGCATGTAC +
Preference number: 4 (lower is better)
Translates to: SWGRSQESNTDHLEFQNTLYWND*RFWGMY
Trigger: GTACATGCCCCAAAACCGGCAGTCGTTCCAGTATAA...CGTGTTCTGAAATTCCAGATGATCTGTGTTGGATTCTTGGCTTCTACCCCATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp AGGGAGTCTCCTCGCATAAGCCACAAAGACACGTGGCAAAAAGCTGACATCTTTGAATATCATCAGAGCTaGATAAACCTTCCCCACTGT +
Preference number: 4 (lower is better)
Translates to: RESPRISHKDTWQKADIFEYHQS*INLPHC
Trigger: ACAGTGGGGAAGGTTTATGCAGCTCTGATGATATTC...AAAGATGTCAGCTTTTTGCCACGTGTCTTTGTGGCTTATGCGAGGAGACTCCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp TCACATGCACAGTCCGAGATTCCTGGTTTATTCTATTGGAATAAAATACTCTGTACTGGAACACACGCCTaGTGCATGCAGGCGTCTGAG +
Preference number: 4 (lower is better)
Translates to: SHAQSEIPGLFYWNKILCTGTHA*CMQASE
Trigger: CTCAGACGCCTGCATGCAGCAGGCGTGTGTTCCAGT...ACAGAGTATTTTATTCCAATAGAATAAACCAGGAATCTCGGACTGTGCATGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp GCTAGGCTGTGTGGGTTTAGAAAAGTGGATTCTCGACCCAACACTGCCTGGGGAAAATGTGTCTTTTGTTaGATAGCCCTATGGGTTAAT +
Preference number: 4 (lower is better)
Translates to: ARLCGFRKVDSRPNTAWGKCVFC*IALWVN
Trigger: ATTAACCCATAGGGCTATGCAACAAAAGACACATTT...TCCCCAGGCAGTGTTGGGTCGAGAATCCACTTTTCTAAACCCACACAGCCTAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp ACACACACACACACACACACATCACACACAATTTCTTTGAGGAGAATCATGGGGTTGACTGGTTCCAGATaGAGACAACTGGGTGATGCA +
Preference number: 4 (lower is better)
Translates to: THTHTHTSHTISLRRIMGLTGSR*RQLGDA
Trigger: TGCATCACCCAGTTGTCTGCATCTGGAACCAGTCAA...CCCCATGATTCTCCTCAAAGAAATTGTGTGTGATGTGTGTGTGTGTGTGTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp TCATGGGGTAGAAGCCAAGAATCCAACACAGATCATCTGGAATTTCAGAACACGTGTCGAAGTTGGTTGTaGGAGTCTCATCCTGGAAGT +
Preference number: 4 (lower is better)
Translates to: SWGRSQESNTDHLEFQNTCRSWL*ESHPGS
Trigger: ACTTCCAGGATGAGACTCCCACAACCAACTTCGACA...CGTGTTCTGAAATTCCAGATGATCTGTGTTGGATTCTTGGCTTCTACCCCATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CAGCAAACTAGTCAATCACAGAATTTCTTTTTAAGTAGGTCCCAGTTGTGTTGCTCCAAGCACCCATGCTaGATGCTGAGTCCCAGGACA +
Preference number: 4 (lower is better)
Translates to: QQTSQSQNFFLSRSQLCCSKHPC*MLSPRT
Trigger: TGTCCTGGGACTCAGCATCCAGCATGGGTGCTTGGA...GCAACACAACTGGGACCTACTTAAAAAGAAATTCTGTGATTGACTAGTTTGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp AGGGAGTCTCCTCGCATAAGCCACAAAGACACGTGGCAAAAAGCTGACATCTTTAGCCACAAAGACACGTaGCAAAAAGCTGACATCTTT +
Preference number: 4 (lower is better)
Translates to: RESPRISHKDTWQKADIFSHKDT*QKADIF
Trigger: AAAGATGTCAGCTTTTTGCCACGTGTCTTTGTGGCT...AAAGATGTCAGCTTTTTGCCACGTGTCTTTGTGGCTTATGCGAGGAGACTCCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GGGGTAGAAGCCAAGAATCCAACACAGATCATCTGGAATTTCAGAACACGGAGGAGCCACAAAGACACGTaGCAAAAAGCTGACATCTTT +
Preference number: 4 (lower is better)
Translates to: GVEAKNPTQIIWNFRTRRSHKDT*QKADIF
Trigger: AAAGATGTCAGCTTTTTGCCACGTGTCTTTGTGGCT...CCTCCGTGTTCTGAAATTCCAGATGATCTGTGTTGGATTCTTGGCTTCTACCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp AGGGAGTCTCCTCGCATAAGCCACAAAGACACGTGGCAAAAAGCTGACATCTTTTGTTGCATAGCCCTATaGGTTAATGACATCCACACA +
Preference number: 4 (lower is better)
Translates to: RESPRISHKDTWQKADIFCCIAL*VNDIHT
Trigger: TGTGTGGATGTCATTAACCCATAGGGCTATGCAACA...AAAGATGTCAGCTTTTTGCCACGTGTCTTTGTGGCTTATGCGAGGAGACTCCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp TCATGGGGTAGAAGCCAAGAATCCAACACAGATCATCTGGAATTTCAGAACACGTGGAGAACATGGATGTaGACACGATGTTCAGGCATT +
Preference number: 4 (lower is better)
Translates to: SWGRSQESNTDHLEFQNTWRTWM*TRCSGI
Trigger: AATGCCTGAACATCGTGTTCACATCCATGTTCTCCA...CGTGTTCTGAAATTCCAGATGATCTGTGTTGGATTCTTGGCTTCTACCCCATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp TCACATGCACAGTCCGAGATTCCTGGTTTATTCTATTGGAATAAAATACTCTGTGCAACAGGAGCACAGTaGTCACATGCACAGTCCGAG +
Preference number: 4 (lower is better)
Translates to: SHAQSEIPGLFYWNKILCATGAQ*SHAQSE
Trigger: CTCGGACTGTGCATGTGATCACTGTGCTCCTGTTGC...ACAGAGTATTTTATTCCAATAGAATAAACCAGGAATCTCGGACTGTGCATGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp CAGCAAACTAGTCAATCACAGAATTTCTTTTTAAGTAGGTCCCAGTTGTGTTGCAGGCCTTGTGGAACTTaGCCATGTAGAACTCCAGGC +
Preference number: 4 (lower is better)
Translates to: QQTSQSQNFFLSRSQLCCRPCGT*PCRTPG
Trigger: GCCTGGAGTTCTACATGGGCAAGTTCCACAAGGCCT...GCAACACAACTGGGACCTACTTAAAAAGAAATTCTGTGATTGACTAGTTTGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp TCACATGCACAGTCCGAGATTCCTGGTTTATTCTATTGGAATAAAATACTCTGTCCAAATACTGACCCCTaGAGTCCCTCTCCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: SHAQSEIPGLFYWNKILCPNTDP*SPSPAP
Trigger: AGGAGCTGGAGAGGGACTGCAGGGGTCAGTATTTGG...ACAGAGTATTTTATTCCAATAGAATAAACCAGGAATCTCGGACTGTGCATGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp TCACATGCACAGTCCGAGATTCCTGGTTTATTCTATTGGAATAAAATACTCTGTCACAGCACTGCTTGGTaGGCCATCCATATCGGCAGA +
Preference number: 4 (lower is better)
Translates to: SHAQSEIPGLFYWNKILCHSTAW*AIHIGR
Trigger: TCTGCCGATATGGATGGCGCACCAAGCAGTGCTGTG...ACAGAGTATTTTATTCCAATAGAATAAACCAGGAATCTCGGACTGTGCATGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp TCACATGCACAGTCCGAGATTCCTGGTTTATTCTATTGGAATAAAATACTCTGTCCTCCCAGCATCTTGTaGACCTTGGACAGTGTCCTG +
Preference number: 4 (lower is better)
Translates to: SHAQSEIPGLFYWNKILCPPSIL*TLDSVL
Trigger: CAGGACACTGTCCAAGGTGCACAAGATGCTGGGAGG...ACAGAGTATTTTATTCCAATAGAATAAACCAGGAATCTCGGACTGTGCATGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp ACACACACACACACACACACATCACACACAATTTCTTTGAGGAGAATCATGGGGCACATCCTTCTACTTTaGAACAGGAGCACAGTGATC +
Preference number: 4 (lower is better)
Translates to: THTHTHTSHTISLRRIMGHILLL*NRSTVI
Trigger: GATCACTGTGCTCCTGTTGCAAAGTAGAAGGATGTG...CCCCATGATTCTCCTCAAAGAAATTGTGTGTGATGTGTGTGTGTGTGTGTGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp TCACATGCACAGTCCGAGATTCCTGGTTTATTCTATTGGAATAAAATACTCTGTTTCTCGACCCAACACTaGCTGGGGAAATGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: SHAQSEIPGLFYWNKILCFSTQH*LGKWLW
Trigger: CCACAGCCATTTCCCCAGGCAGTGTTGGGTCGAGAA...ACAGAGTATTTTATTCCAATAGAATAAACCAGGAATCTCGGACTGTGCATGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp TCACATGCACAGTCCGAGATTCCTGGTTTATTCTATTGGAATAAAATACTCTGTTCTCCCGTCAGGATCTaGAAGACAGTGAGGATGGCG +
Preference number: 4 (lower is better)
Translates to: SHAQSEIPGLFYWNKILCSPVRI*KTVRMA
Trigger: CGCCATCCTCACTGTCTTCCAGATCCTGACGGGAGA...ACAGAGTATTTTATTCCAATAGAATAAACCAGGAATCTCGGACTGTGCATGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp TCATGGGGTAGAAGCCAAGAATCCAACACAGATCATCTGGAATTTCAGAACACGGCCCGTCAGCATCACTaGGATATGTACAATAGTGTT +
Preference number: 4 (lower is better)
Translates to: SWGRSQESNTDHLEFQNTARQHH*DMYNSV
Trigger: AACACTATTGTACATATCCCAGTGATGCTGACGGGC...CGTGTTCTGAAATTCCAGATGATCTGTGTTGGATTCTTGGCTTCTACCCCATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CAGCAAACTAGTCAATCACAGAATTTCTTTTTAAGTAGGTCCCAGTTGTGTTGCGGAGCCTGCTGCATCTaGTCTCTGGTGGTTTTGTTC +
Preference number: 4 (lower is better)
Translates to: QQTSQSQNFFLSRSQLCCGACCI*SLVVLF
Trigger: GAACAAAACCACCAGAGACCAGATGCAGCAGGCTCC...GCAACACAACTGGGACCTACTTAAAAAGAAATTCTGTGATTGACTAGTTTGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp TCACATGCACAGTCCGAGATTCCTGGTTTATTCTATTGGAATAAAATACTCTGTCGACCCAACACTGCCTaGGGAAATGGCTGTGGTTCT +
Preference number: 4 (lower is better)
Translates to: SHAQSEIPGLFYWNKILCRPNTA*GNGCGS
Trigger: AGAACCACAGCCATTTCCCCAGGCAGTGTTGGGTCG...ACAGAGTATTTTATTCCAATAGAATAAACCAGGAATCTCGGACTGTGCATGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
3UTR CAA 72 bp ACAAAACGTCAGTGTCAAAATACACATCCTTCTACTTaGCAACAGGAGCACAGTGATCACATGCACAGTCCG +
Preference number: 4 (lower is better)
Translates to: TKRQCQNTHPST*QQEHSDHMHSP
Trigger: CGGACTGTGCATGTGATCACTGTGCTCCTGTTGCAAAGTAGAAGGATGTGTATTTTGACACTGACGTTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp CAGCAAACTAGTCAATCACAGAATTTCTTTTTAAGTAGGTCCCAGTTGTGTTGCCCACAGAGTGTGCCCTaGGAATCATATGCAGAACAG +
Preference number: 4 (lower is better)
Translates to: QQTSQSQNFFLSRSQLCCPQSVP*ESYAEQ
Trigger: CTGTTCTGCATATGATTCTCAGGGCACACTCTGTGG...GCAACACAACTGGGACCTACTTAAAAAGAAATTCTGTGATTGACTAGTTTGCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp TCACATGCACAGTCCGAGATTCCTGGTTTATTCTATTGGAATAAAATACTCTGTGGCTTGCTACCTGGCTaGCATCGCGAGTACTTTTCA +
Preference number: 4 (lower is better)
Translates to: SHAQSEIPGLFYWNKILCGLLPG*HREYFS
Trigger: TGAAAAGTACTCGCGATGGCAGCCAGGTAGCAAGCC...ACAGAGTATTTTATTCCAATAGAATAAACCAGGAATCTCGGACTGTGCATGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp TCACATGCACAGTCCGAGATTCCTGGTTTATTCTATTGGAATAAAATACTCTGTTCTCCTCTTCATCCTTaGTCAGCTCTTGGGCGTTGG +
Preference number: 4 (lower is better)
Translates to: SHAQSEIPGLFYWNKILCSPLHP*SALGRW
Trigger: CCAACGCCCAAGAGCTGACCAAGGATGAAGAGGAGA...ACAGAGTATTTTATTCCAATAGAATAAACCAGGAATCTCGGACTGTGCATGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp TCACATGCACAGTCCGAGATTCCTGGTTTATTCTATTGGAATAAAATACTCTGTCCTGCTCCTCATAGGTaGCATCCACGGAGTGTTTCA +
Preference number: 4 (lower is better)
Translates to: SHAQSEIPGLFYWNKILCPAPHR*HPRSVS
Trigger: TGAAACACTCCGTGGATGCCACCTATGAGGAGCAGG...ACAGAGTATTTTATTCCAATAGAATAAACCAGGAATCTCGGACTGTGCATGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CAGCAAACTAGTCAATCACAGAATTTCTTTTTAAGTAGGTCCCAGTTGTGTTGCCAGTCATGTCCTCGTTaGAGATGGGCATGTTCATGC +
Preference number: 4 (lower is better)
Translates to: QQTSQSQNFFLSRSQLCCQSCPR*RWACSC
Trigger: GCATGAACATGCCCATCTCCAACGAGGACATGACTG...GCAACACAACTGGGACCTACTTAAAAAGAAATTCTGTGATTGACTAGTTTGCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CAGCAAACTAGTCAATCACAGAATTTCTTTTTAAGTAGGTCCCAGTTGTGTTGCGATCATATACTCGAATaGTGGCCACTCGGTGATGCG +
Preference number: 4 (lower is better)
Translates to: QQTSQSQNFFLSRSQLCCDHILE*WPLGDA
Trigger: CGCATCACCGAGTGGCCACCATTCGAGTATATGATC...GCAACACAACTGGGACCTACTTAAAAAGAAATTCTGTGATTGACTAGTTTGCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371355.8
CDS-3UTR CCA 90 bp ACACACACACACACACACACATCACACACAATTTCTTTGAGGAGAATCATGGGGAGCCACAAAGACACGTaGCAAAAAGCTGACATCTTT +
Preference number: 4 (lower is better)
Translates to: THTHTHTSHTISLRRIMGSHKDT*QKADIF
Trigger: AAAGATGTCAGCTTTTTGCCACGTGTCTTTGTGGCT...CCCCATGATTCTCCTCAAAGAAATTGTGTGTGATGTGTGTGTGTGTGTGTGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp GGGGTAGAAGCCAAGAATCCAACACAGATCATCTGGAATTTCAGAACACGGAGGGCAGAATCCAAAGTTTaGCTGATAAATATGACTCAG +
Preference number: 4 (lower is better)
Translates to: GVEAKNPTQIIWNFRTRRAESKV*LINMTQ
Trigger: CTGAGTCATATTTATCAGCCAAACTTTGGATTCTGC...CCTCCGTGTTCTGAAATTCCAGATGATCTGTGTTGGATTCTTGGCTTCTACCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp ACACACACACACACACACACATCACACACAATTTCTTTGAGGAGAATCATGGGGCCTTGGATTCATCTGTaGAGTAGAAAAACTTCCCTT +
Preference number: 4 (lower is better)
Translates to: THTHTHTSHTISLRRIMGPWIHL*SRKTSL
Trigger: AAGGGAAGTTTTTCTACTGCACAGATGAATCCAAGG...CCCCATGATTCTCCTCAAAGAAATTGTGTGTGATGTGTGTGTGTGTGTGTGTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp TCACATGCACAGTCCGAGATTCCTGGTTTATTCTATTGGAATAAAATACTCTGTAGGACAGCAAATGGCTaGCTTGTTTGCCACCATGAC +
Preference number: 4 (lower is better)
Translates to: SHAQSEIPGLFYWNKILCRTANG*LVCHHD
Trigger: GTCATGGTGGCAAACAAGGCAGCCATTTGCTGTCCT...ACAGAGTATTTTATTCCAATAGAATAAACCAGGAATCTCGGACTGTGCATGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp ACACACACACACACACACACATCACACACAATTTCTTTGAGGAGAATCATGGGGAGTTTCAGAGTGTTGTaGCTTCAGGTAAGGAAATTC +
Preference number: 4 (lower is better)
Translates to: THTHTHTSHTISLRRIMGSFRVL*LQVRKF
Trigger: GAATTTCCTTACCTGAAGGCACAACACTCTGAAACT...CCCCATGATTCTCCTCAAAGAAATTGTGTGTGATGTGTGTGTGTGTGTGTGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp TCACATGCACAGTCCGAGATTCCTGGTTTATTCTATTGGAATAAAATACTCTGTCATTTCTGCTCTTCTTaGTGGCCGCTCTCTTCAGCA +
Preference number: 4 (lower is better)
Translates to: SHAQSEIPGLFYWNKILCHFCSS*WPLSSA
Trigger: TGCTGAAGAGAGCGGCCACCAAGAAGAGCAGAAATG...ACAGAGTATTTTATTCCAATAGAATAAACCAGGAATCTCGGACTGTGCATGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CAGCAAACTAGTCAATCACAGAATTTCTTTTTAAGTAGGTCCCAGTTGTGTTGCGGTTGTAATGCACCATaGCCACACACAGTGTGTTCA +
Preference number: 4 (lower is better)
Translates to: QQTSQSQNFFLSRSQLCCGCNAP*PHTVCS
Trigger: TGAACACACTGTGTGTGGCCATGGTGCATTACAACC...GCAACACAACTGGGACCTACTTAAAAAGAAATTCTGTGATTGACTAGTTTGCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp CAGCAAACTAGTCAATCACAGAATTTCTTTTTAAGTAGGTCCCAGTTGTGTTGCCTTCAGCCACTTCTTTaGCCTTTTGCAGAGCAAGCT +
Preference number: 4 (lower is better)
Translates to: QQTSQSQNFFLSRSQLCCLQPLL*PFAEQA
Trigger: AGCTTGCTCTGCAAAAGGCCAAAGAAGTGGCTGAAG...GCAACACAACTGGGACCTACTTAAAAAGAAATTCTGTGATTGACTAGTTTGCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp TCACATGCACAGTCCGAGATTCCTGGTTTATTCTATTGGAATAAAATACTCTGTTGTCCTCGTTGGAGATaGGCATGTTCATGCGAACCA +
Preference number: 4 (lower is better)
Translates to: SHAQSEIPGLFYWNKILCCPRWR*ACSCEP
Trigger: TGGTTCGCATGAACATGCCCATCTCCAACGAGGACA...ACAGAGTATTTTATTCCAATAGAATAAACCAGGAATCTCGGACTGTGCATGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp TCACATGCACAGTCCGAGATTCCTGGTTTATTCTATTGGAATAAAATACTCTGTCAGCCACTGCTTGACTaGTTCCAGATGCAGACAACT +
Preference number: 4 (lower is better)
Translates to: SHAQSEIPGLFYWNKILCQPLLD*FQMQTT
Trigger: AGTTGTCTGCATCTGGAACCAGTCAAGCAGTGGCTG...ACAGAGTATTTTATTCCAATAGAATAAACCAGGAATCTCGGACTGTGCATGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp TCACATGCACAGTCCGAGATTCCTGGTTTATTCTATTGGAATAAAATACTCTGTTTCCCTTTGAAGAGCTaGACCGCAATGACGGCAAAT +
Preference number: 4 (lower is better)
Translates to: SHAQSEIPGLFYWNKILCFPLKS*TAMTAN
Trigger: ATTTGCCGTCATTGCGGTGCAGCTCTTCAAAGGGAA...ACAGAGTATTTTATTCCAATAGAATAAACCAGGAATCTCGGACTGTGCATGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp CAGCAAACTAGTCAATCACAGAATTTCTTTTTAAGTAGGTCCCAGTTGTGTTGCACATACCACAGAGTGTaGCCTGAGAATCATATGCAG +
Preference number: 4 (lower is better)
Translates to: QQTSQSQNFFLSRSQLCCTYHRV*PENHMQ
Trigger: CTGCATATGATTCTCAGGGCACACTCTGTGGTATGT...GCAACACAACTGGGACCTACTTAAAAAGAAATTCTGTGATTGACTAGTTTGCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp TCACATGCACAGTCCGAGATTCCTGGTTTATTCTATTGGAATAAAATACTCTGTCTTCCTACCAGCCTTTaGCTCTCTTCTGCTGTATGT +
Preference number: 4 (lower is better)
Translates to: SHAQSEIPGLFYWNKILCLPTSL*LSSAVC
Trigger: ACATACAGCAGAAGAGAGGCAAAGGCTGGTAGGAAG...ACAGAGTATTTTATTCCAATAGAATAAACCAGGAATCTCGGACTGTGCATGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp TCACATGCACAGTCCGAGATTCCTGGTTTATTCTATTGGAATAAAATACTCTGTCTTCAGCCACTTCTTTaGCCTTTTGCAGAGCAAGCT +
Preference number: 4 (lower is better)
Translates to: SHAQSEIPGLFYWNKILCLQPLL*PFAEQA
Trigger: AGCTTGCTCTGCAAAAGGCCAAAGAAGTGGCTGAAG...ACAGAGTATTTTATTCCAATAGAATAAACCAGGAATCTCGGACTGTGCATGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp CAGCAAACTAGTCAATCACAGAATTTCTTTTTAAGTAGGTCCCAGTTGTGTTGCACAGTGTCAGGACAATaGAGTAAAAGGACGAGAACA +
Preference number: 4 (lower is better)
Translates to: QQTSQSQNFFLSRSQLCCTVSGQ*SKRTRT
Trigger: TGTTCTCGTCCTTTTACTTCATTGTCCTGACACTGT...GCAACACAACTGGGACCTACTTAAAAAGAAATTCTGTGATTGACTAGTTTGCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CCA 90 bp TCACATGCACAGTCCGAGATTCCTGGTTTATTCTATTGGAATAAAATACTCTGTGCCCGTCAGCATCACTaGGATATGTACAATAGTGTT +
Preference number: 4 (lower is better)
Translates to: SHAQSEIPGLFYWNKILCARQHH*DMYNSV
Trigger: AACACTATTGTACATATCCCAGTGATGCTGACGGGC...ACAGAGTATTTTATTCCAATAGAATAAACCAGGAATCTCGGACTGTGCATGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp TCACATGCACAGTCCGAGATTCCTGGTTTATTCTATTGGAATAAAATACTCTGTAGACAATCAAGATGTTaGGGACATTCTTCAGGGAGT +
Preference number: 4 (lower is better)
Translates to: SHAQSEIPGLFYWNKILCRQSRC*GHSSGS
Trigger: ACTCCCTGAAGAATGTCCTCAACATCTTGATTGTCT...ACAGAGTATTTTATTCCAATAGAATAAACCAGGAATCTCGGACTGTGCATGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR TCA 90 bp TCACATGCACAGTCCGAGATTCCTGGTTTATTCTATTGGAATAAAATACTCTGTTTTGGCAGCTCACTATaGGATTCAGGGGACATATAT +
Preference number: 4 (lower is better)
Translates to: SHAQSEIPGLFYWNKILCFGSSL*DSGDIY
Trigger: ATATATGTCCCCTGAATCTCATAGTGAGCTGCCAAA...ACAGAGTATTTTATTCCAATAGAATAAACCAGGAATCTCGGACTGTGCATGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp TCACATGCACAGTCCGAGATTCCTGGTTTATTCTATTGGAATAAAATACTCTGTGAATATCATCAGAGCTaGATAAACCTTCCCCACTGT +
Preference number: 4 (lower is better)
Translates to: SHAQSEIPGLFYWNKILCEYHQS*INLPHC
Trigger: ACAGTGGGGAAGGTTTATGCAGCTCTGATGATATTC...ACAGAGTATTTTATTCCAATAGAATAAACCAGGAATCTCGGACTGTGCATGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp TCACATGCACAGTCCGAGATTCCTGGTTTATTCTATTGGAATAAAATACTCTGTCCTTGGATTCATCTGTaGAGTAGAAAAACTTCCCTT +
Preference number: 4 (lower is better)
Translates to: SHAQSEIPGLFYWNKILCPWIHL*SRKTSL
Trigger: AAGGGAAGTTTTTCTACTGCACAGATGAATCCAAGG...ACAGAGTATTTTATTCCAATAGAATAAACCAGGAATCTCGGACTGTGCATGTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR GCA 90 bp TCACATGCACAGTCCGAGATTCCTGGTTTATTCTATTGGAATAAAATACTCTGTCTCGTACTCATAGGGTaGATCATAGAACTTCATCAT +
Preference number: 4 (lower is better)
Translates to: SHAQSEIPGLFYWNKILCLVLIG*IIELHH
Trigger: ATGATGAAGTTCTATGATGCACCCTATGAGTACGAG...ACAGAGTATTTTATTCCAATAGAATAAACCAGGAATCTCGGACTGTGCATGTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS GCA 90 bp CGCCGCTCGCCCTTGGCGCCGGCGCACTCCTTGCTCGGATCCTGGTaGCGGTGCGCGCGGTGGCGTCGGGGCTCCCGCTCGGCCGCCTCC +
Preference number: 5 (lower is better)
Translates to: RRSPLAPAHSLLGSW*RCARWRRGSRSAAS
Trigger: GGAGGCGGCCGAGCGGGAGCCCCGACGCCACCGCGCGCACCGGCACCAGGATCCGAGCAAGGAGTGCGCCGGCGCCAAGGGCGAGCGGCG
80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp CACAGGAGCCTCACCAAGGTGGGCAAGGCCTCCCCCGAGGGCCGGCTGCCCCGTCCCGCCGCGGGGGTCTaGTCCTTGTCGCGGTGCCGG +
Preference number: 5 (lower is better)
Translates to: HRSLTKVGKASPEGRLPRPAAGV*SLSRCR
Trigger: CCGGCACCGCGACAAGGACAAGACCCCCGCGGCGGG...ACGGGGCAGCCGGCCCTCGGGGGAGGCCTTGCCCACCTTGGTGAGGCTCCTGTG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS CCA 90 bp GGCCTGTGGGTGGGGTCCCGGCTCCTGGCCAGCTGTTGGCGACGTTaGGTGGCTGCTGAGGGAGGGCTTGGGCTTCGGGGGCTCACGGCC +
Preference number: 5 (lower is better)
Translates to: GLWVGSRLLASCWRR*VAAEGGLGLRGLTA
Trigger: GGCCGTGAGCCCCCGAAGCCCAAGCCCTCCCTCAGCAGCCACCCAACGTCGCCAACAGCTGGCCAGGAGCCGGGACCCCACCCACAGGCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS CCA 90 bp GCCCTGTGGGTGGGGTCCCGGCTCCTGGCCAGCTGTTGGCGACGTTaGGTGGCTGCTGAGGGAGGGCTTGGGCTTCGGGGGCTCACGGCC +
Preference number: 5 (lower is better)
Translates to: ALWVGSRLLASCWRR*VAAEGGLGLRGLTA
Trigger: GGCCGTGAGCCCCCGAAGCCCAAGCCCTCCCTCAGCAGCCACCCAACGTCGCCAACAGCTGGCCAGGAGCCGGGACCCCACCCACAGGGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp CACAGGAGCCTCACCAAGGTGGGCAAGGCCTCCCCCGAGGGCCGGCTGCCCCGTGCGGGGGTCTTGTCCTaGTCGCGGTGCCGGTGGTGC +
Preference number: 5 (lower is better)
Translates to: HRSLTKVGKASPEGRLPRAGVLS*SRCRWC
Trigger: GCACCACCGGCACCGCGACAAGGACAAGACCCCCGC...ACGGGGCAGCCGGCCCTCGGGGGAGGCCTTGCCCACCTTGGTGAGGCTCCTGTG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp CACAGGAGCCTCACCAAGGTGGGCAAGGCCTCCCCCGAGGGCCGGCTGCCCCGTGAGGAGCGGCCCGAGTaGGTGGCCACAGCCTCCTCG +
Preference number: 5 (lower is better)
Translates to: HRSLTKVGKASPEGRLPREERPE*VATASS
Trigger: CGAGGAGGCTGTGGCCACCAACTCGGGCCGCTCCTC...ACGGGGCAGCCGGCCCTCGGGGGAGGCCTTGCCCACCTTGGTGAGGCTCCTGTG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS GCA 90 bp TCGCAGCTGGCCCGCAGGTTCTGCAGCCGTAGCTGGCTGGCCCGCTaGTCCCACACCGAGCGCGCCTTGGCCGAGTTCTGCTGCCTGGCG +
Preference number: 5 (lower is better)
Translates to: SQLARRFCSRSWLAR*SHTERALAEFCCLA
Trigger: CGCCAGGCAGCAGAACTCGGCCAAGGCGCGCTCGGTGTGGGAGCAGCGGGCCAGCCAGCTACGGCTGCAGAACCTGCGGGCCAGCTGCGA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp TCGGCCACCCGAGCTGAGTCCCAGGGTGCAGTGGTAACCGTTGGGCACGCGGCGGCGCCGGCGCACTCCTaGCTCGGATCCTGGTGCCGG +
Preference number: 5 (lower is better)
Translates to: SATRAESQGAVVTVGHAAAPAHS*LGSWCR
Trigger: CCGGCACCAGGATCCGAGCAAGGAGTGCGCCGGCGC...CGCCGCGTGCCCAACGGTTACCACTGCACCCTGGGACTCAGCTCGGGTGGCCGA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS CCA 90 bp GGAACCACTGCCCTGTGGGTGGGGTCCCGGCTCCTGGCCAGCTGTTaGCGACGTTGGGTGGCTGCTGAGGGAGGGCTTGGGCTTCGGGGG +
Preference number: 5 (lower is better)
Translates to: GTTALWVGSRLLASC*RRWVAAEGGLGLRG
Trigger: CCCCCGAAGCCCAAGCCCTCCCTCAGCAGCCACCCAACGTCGCCAACAGCTGGCCAGGAGCCGGGACCCCACCCACAGGGCAGTGGTTCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp GTCTTGGTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGCCACCCGAGCTGAGTCCGCCTCAGGTCGGGCTTaGCCTCCCACGGGCCCCCGC +
Preference number: 5 (lower is better)
Translates to: VLVRVVVAVPCSATRAESASGRA*PPTGPR
Trigger: GCGGGGGCCCGTGGGAGGCAAAGCCCGACCTGAGGC...GGACTCAGCTCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGACCAAGAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CAA 90 bp TGGCGCCAGGACAGTGCTGGGCATCAGGTGCCCGGCCTCAGTGGCAGGAGCCGTGCGGGGGTCTTGTCCTaGTCGCGGTGCCGGTGGTGC +
Preference number: 5 (lower is better)
Translates to: WRQDSAGHQVPGLSGRSRAGVLS*SRCRWC
Trigger: GCACCACCGGCACCGCGACAAGGACAAGACCCCCGC...ACGGCTCCTGCCACTGAGGCCGGGCACCTGATGCCCAGCACTGTCCTGGCGCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp TGGCGCCAGGACAGTGCTGGGCATCAGGTGCCCGGCCTCAGTGGCAGGAGCCGTCTGCTGAGGGAGGGCTaGGGCTTCGGGGGCTCACGG +
Preference number: 5 (lower is better)
Translates to: WRQDSAGHQVPGLSGRSRLLREG*GFGGSR
Trigger: CCGTGAGCCCCCGAAGCCCAAGCCCTCCCTCAGCAG...ACGGCTCCTGCCACTGAGGCCGGGCACCTGATGCCCAGCACTGTCCTGGCGCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS CCA 90 bp TGGCCAGTACTCCCGGCACTCAGTGTCGCCCTCGCACAGCCGGGCTaGGGCCTCCTTGCCACAGGGGAAGTCACCCACGGGCTCCGCATC +
Preference number: 5 (lower is better)
Translates to: WPVLPALSVALAQPG*GLLATGEVTHGLRI
Trigger: GATGCGGAGCCCGTGGGTGACTTCCCCTGTGGCAAGGAGGCCCCAGCCCGGCTGTGCGAGGGCGACACTGAGTGCCGGGAGTACTGGCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp CACAGGAGCCTCACCAAGGTGGGCAAGGCCTCCCCCGAGGGCCGGCTGCCCCGTACCCTCTCTCGCTCCTaGGCAAACTCCCCCGAGAGC +
Preference number: 5 (lower is better)
Translates to: HRSLTKVGKASPEGRLPRTLSRS*ANSPES
Trigger: GCTCTCGGGGGAGTTTGCCAAGGAGCGAGAGAGGGT...ACGGGGCAGCCGGCCCTCGGGGGAGGCCTTGCCCACCTTGGTGAGGCTCCTGTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp TCGGCCACCCGAGCTGAGTCCCAGGGTGCAGTGGTAACCGTTGGGCACGCGGCGCACACCGAGCGCGCCTaGGCCGAGTTCTGCTGCCTG +
Preference number: 5 (lower is better)
Translates to: SATRAESQGAVVTVGHAAHTERA*AEFCCL
Trigger: CAGGCAGCAGAACTCGGCCAAGGCGCGCTCGGTGTG...CGCCGCGTGCCCAACGGTTACCACTGCACCCTGGGACTCAGCTCGGGTGGCCGA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CAA 90 bp CCCCTCCGTCCCGAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCGCGGGGGTCTTGTCCTaGTCGCGGTGCCGGTGGTGC +
Preference number: 5 (lower is better)
Translates to: PLRPEVSAHFQVGPASLCAGVLS*SRCRWC
Trigger: GCACCACCGGCACCGCGACAAGGACAAGACCCCCGC...GCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTCGGGACGGAGGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp GCCCGGCCTCAGTGGCAGGAGCCGTGTCCTCCCTCGGTCACTTGCTCTGAGTTTCCCGCCGCGGGGGTCTaGTCCTTGTCGCGGTGCCGG +
Preference number: 5 (lower is better)
Translates to: ARPQWQEPCPPSVTCSEFPAAGV*SLSRCR
Trigger: CCGGCACCGCGACAAGGACAAGACCCCCGCGGCGGG...AAACTCAGAGCAAGTGACCGAGGGAGGACACGGCTCCTGCCACTGAGGCCGGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp GTCTTGGTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGCCACCCGAGCTGAGTCCGCGCCGGCGCACTCCTaGCTCGGATCCTGGTGCCGG +
Preference number: 5 (lower is better)
Translates to: VLVRVVVAVPCSATRAESAPAHS*LGSWCR
Trigger: CCGGCACCAGGATCCGAGCAAGGAGTGCGCCGGCGC...GGACTCAGCTCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGACCAAGAC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CAA 90 bp AGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGTGCGCCGGCGCACTCCTaGCTCGGATCCTGGTGCCGG +
Preference number: 5 (lower is better)
Translates to: RSRRTFRWALLLCAARPRAPAHS*LGSWCR
Trigger: CCGGCACCAGGATCCGAGCAAGGAGTGCGCCGGCGC...ACGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp TGGCGCCAGGACAGTGCTGGGCATCAGGTGCCCGGCCTCAGTGGCAGGAGCCGTGCTCCTGGCCAGCTGTaGGCGACGTTGGGTGGCTGC +
Preference number: 5 (lower is better)
Translates to: WRQDSAGHQVPGLSGRSRAPGQL*ATLGGC
Trigger: GCAGCCACCCAACGTCGCCAACAGCTGGCCAGGAGC...ACGGCTCCTGCCACTGAGGCCGGGCACCTGATGCCCAGCACTGTCCTGGCGCCA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp TCGGCCACCCGAGCTGAGTCCCAGGGTGCAGTGGTAACCGTTGGGCACGCGGCGTCTGTCTTCCCGCTCTaGAGGCTGGCGCGGGCGAAG +
Preference number: 5 (lower is better)
Translates to: SATRAESQGAVVTVGHAASVFPL*RLARAK
Trigger: CTTCGCCCGCGCCAGCCTCAAGAGCGGGAAGACAGA...CGCCGCGTGCCCAACGGTTACCACTGCACCCTGGGACTCAGCTCGGGTGGCCGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CAA 90 bp TGGCGCCAGGACAGTGCTGGGCATCAGGTGCCCGGCCTCAGTGGCAGGAGCCGTTCTGTCTTCCCGCTCTaGAGGCTGGCGCGGGCGAAG +
Preference number: 5 (lower is better)
Translates to: WRQDSAGHQVPGLSGRSRSVFPL*RLARAK
Trigger: CTTCGCCCGCGCCAGCCTCAAGAGCGGGAAGACAGA...ACGGCTCCTGCCACTGAGGCCGGGCACCTGATGCCCAGCACTGTCCTGGCGCCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp CCCCTCCGTCCCGAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCACACCGAGCGCGCCTaGGCCGAGTTCTGCTGCCTG +
Preference number: 5 (lower is better)
Translates to: PLRPEVSAHFQVGPASLCHTERA*AEFCCL
Trigger: CAGGCAGCAGAACTCGGCCAAGGCGCGCTCGGTGTG...GCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTCGGGACGGAGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp CGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTCTTGGTCAGGGTGGTGGTGCCTCAGGTCGGGCTTaGCCTCCCACGGGCCCCCGC +
Preference number: 5 (lower is better)
Translates to: RLSGHGAASTSGLGQGGGASGRA*PPTGPR
Trigger: GCGGGGGCCCGTGGGAGGCAAAGCCCGACCTGAGGC...ACCACCACCCTGACCAAGACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CAA 90 bp CGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTCTTGGTCAGGGTGGTGGTCCCGCCGCGGGGGTCTaGTCCTTGTCGCGGTGCCGG +
Preference number: 5 (lower is better)
Translates to: RLSGHGAASTSGLGQGGGPAAGV*SLSRCR
Trigger: CCGGCACCGCGACAAGGACAAGACCCCCGCGGCGGG...ACCACCACCCTGACCAAGACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CAA 90 bp TCCAGGGAGGACAGAGCTTGCCTGAGTGAGCATTCGCTGACACTGGCGGGCTGCCCCGCCGCGGGGGTCTaGTCCTTGTCGCGGTGCCGG +
Preference number: 5 (lower is better)
Translates to: SREDRACLSEHSLTLAGCPAAGV*SLSRCR
Trigger: CCGGCACCGCGACAAGGACAAGACCCCCGCGGCGGG...GCAGCCCGCCAGTGTCAGCGAATGCTCACTCAGGCAAGCTCTGTCCTCCCTGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp ACCCGAGCTGAGTCCCAGGGTGCAGTGGTAACCGTTGGGCACGCGGCGGAGAGGCCCTGGCGGAGCAGCTaGATCAGCCGCGCAGCTCGA +
Preference number: 5 (lower is better)
Translates to: TRAESQGAVVTVGHAAERPWRSS*ISRAAR
Trigger: TCGAGCTGCGCGGCTGATCAAGCTGCTCCGCCAGGG...CCTCTCCGCCGCGTGCCCAACGGTTACCACTGCACCCTGGGACTCAGCTCGGGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CAA 90 bp CCCCTCCGTCCCGAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCCCTGGCGGAGCAGCTaGATCAGCCGCGCAGCTCGA +
Preference number: 5 (lower is better)
Translates to: PLRPEVSAHFQVGPASLCPWRSS*ISRAAR
Trigger: TCGAGCTGCGCGGCTGATCAAGCTGCTCCGCCAGGG...GCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTCGGGACGGAGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp GTCTTGGTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGCCACCCGAGCTGAGTCCCTGCTGAGGGAGGGCTaGGGCTTCGGGGGCTCACGG +
Preference number: 5 (lower is better)
Translates to: VLVRVVVAVPCSATRAESLLREG*GFGGSR
Trigger: CCGTGAGCCCCCGAAGCCCAAGCCCTCCCTCAGCAG...GGACTCAGCTCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGACCAAGAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CAA 90 bp AGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGTCTGCTGAGGGAGGGCTaGGGCTTCGGGGGCTCACGG +
Preference number: 5 (lower is better)
Translates to: RSRRTFRWALLLCAARPRLLREG*GFGGSR
Trigger: CCGTGAGCCCCCGAAGCCCAAGCCCTCCCTCAGCAG...ACGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp TTGGTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGCCACCCGAGCTGAGTCCCAGGAGGAGCGGCCCGAGTaGGTGGCCACAGCCTCCTCG +
Preference number: 5 (lower is better)
Translates to: LVRVVVAVPCSATRAESQEERPE*VATASS
Trigger: CGAGGAGGCTGTGGCCACCAACTCGGGCCGCTCCTC...CTGGGACTCAGCTCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGACCAA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS TCA 90 bp GAGCTGCCTCCGCCCACCGCGGCCGGGGGTGCTAGCACCAGATGTTaGCAGCAAGGGGCTCCCATTCACGGAACCACTGCCCTGTGGGTG +
Preference number: 5 (lower is better)
Translates to: ELPPPTAAGGASTRC*QQGAPIHGTTALWV
Trigger: CACCCACAGGGCAGTGGTTCCGTGAATGGGAGCCCCTTGCTGTCAACATCTGGTGCTAGCACCCCCGGCCGCGGTGGGCGGAGGCAGCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS CCA 90 bp CTGCAGCAGGGCGTTGTGTTCGGAAAGCCCACGGCTGAGCCGGCCTaGGGAGAAGGCAGGGAGGCTGGTCTGAGCCCCGGCGAAGTGGAT +
Preference number: 5 (lower is better)
Translates to: LQQGVVFGKPTAEPA*GEGREAGLSPGEVD
Trigger: ATCCACTTCGCCGGGGCTCAGACCAGCCTCCCTGCCTTCTCCCCAGGCCGGCTCAGCCGTGGGCTTTCCGAACACAACGCCCTGCTGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp CGGTTTAGGGTCTGGTGTGTGGTACGAGACCCAGGAAGGCAGGACAGGAAGGGGGCCTCAGGTCGGGCTTaGCCTCCCACGGGCCCCCGC +
Preference number: 5 (lower is better)
Translates to: RFRVWCVVRDPGRQDRKGASGRA*PPTGPR
Trigger: GCGGGGGCCCGTGGGAGGCAAAGCCCGACCTGAGGC...CCCCTTCCTGTCCTGCCTTCCTGGGTCTCGTACCACACACCAGACCCTAAACCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp GTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCCCTTCCACTCGTGGGAGGAGGGCGCCGGCGCACTCCTaGCTCGGATCCTGGTGCCGG +
Preference number: 5 (lower is better)
Translates to: VVSCPVASLETPSTRGRRAPAHS*LGSWCR
Trigger: CCGGCACCAGGATCCGAGCAAGGAGTGCGCCGGCGC...CCTCCTCCCACGAGTGGAAGGGGTTTCCAAGGAAGCCACAGGGCAGCTGACCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp CACAGGAGCCTCACCAAGGTGGGCAAGGCCTCCCCCGAGGGCCGGCTGCCCCGTAAGCGGCGGAGCAGGTaGGTGGGGCTTAAACAGAAC +
Preference number: 5 (lower is better)
Translates to: HRSLTKVGKASPEGRLPRKRRSR*VGLKQN
Trigger: GTTCTGTTTAAGCCCCACCAACCTGCTCCGCCGCTT...ACGGGGCAGCCGGCCCTCGGGGGAGGCCTTGCCCACCTTGGTGAGGCTCCTGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp TGGCGCCAGGACAGTGCTGGGCATCAGGTGCCCGGCCTCAGTGGCAGGAGCCGTTGCGGTACCCAGGGCTaGGACCCTGCTCCTCATAGG +
Preference number: 5 (lower is better)
Translates to: WRQDSAGHQVPGLSGRSRCGTQG*DPAPHR
Trigger: CCTATGAGGAGCAGGGTCCAAGCCCTGGGTACCGCA...ACGGCTCCTGCCACTGAGGCCGGGCACCTGATGCCCAGCACTGTCCTGGCGCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp GTCTTGGTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGCCACCCGAGCTGAGTCCCCCTGGCGGAGCAGCTaGATCAGCCGCGCAGCTCGA +
Preference number: 5 (lower is better)
Translates to: VLVRVVVAVPCSATRAESPWRSS*ISRAAR
Trigger: TCGAGCTGCGCGGCTGATCAAGCTGCTCCGCCAGGG...GGACTCAGCTCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGACCAAGAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CAA 90 bp GCACCAGTGGTCTTGGTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGCCACCCGACCAGCTGGGGCCAGCTaGATCTCCAGTGCCGTCCGG +
Preference number: 5 (lower is better)
Translates to: APVVLVRVVVAVPCSATRPAGAS*ISSAVR
Trigger: CCGGACGGCACTGGAGATCAAGCTGGCCCCAGCTGG...TCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGACCAAGACCACTGGTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CAA 90 bp TGGCGCCAGGACAGTGCTGGGCATCAGGTGCCCGGCCTCAGTGGCAGGAGCCGTGCCCCACAGCACTGCTaGGTGCGCCATCCATATCGG +
Preference number: 5 (lower is better)
Translates to: WRQDSAGHQVPGLSGRSRAPQHC*VRHPYR
Trigger: CCGATATGGATGGCGCACCAAGCAGTGCTGTGGGGC...ACGGCTCCTGCCACTGAGGCCGGGCACCTGATGCCCAGCACTGTCCTGGCGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS CCA 90 bp GCCCCACAGCACTGCTTGGTGCGCCATCCATATCGGCAGACAGGCTaGGCCCCTTCTCCAGGGACCTCTGCTTCCTGTCCCTGCGGCGGT +
Preference number: 5 (lower is better)
Translates to: APQHCLVRHPYRQTG*APSPGTSASCPCGG
Trigger: ACCGCCGCAGGGACAGGAAGCAGAGGTCCCTGGAGAAGGGGCCCAGCCTGTCTGCCGATATGGATGGCGCACCAAGCAGTGCTGTGGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp GCTGCATGCAGGCGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTCTTGGTCGGGCTGGGGCCTCCTaGCCACAGGGGAAGTCACCC +
Preference number: 5 (lower is better)
Translates to: AACRRLSGHGAASTSGLGRAGAS*PQGKSP
Trigger: GGGTGACTTCCCCTGTGGCAAGGAGGCCCCAGCCCG...ACCAAGACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACGCCTGCATGCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CAA 90 bp GCCCGGCCTCAGTGGCAGGAGCCGTGTCCTCCCTCGGTCACTTGCTCTGAGTTTCCCTGGCGGAGCAGCTaGATCAGCCGCGCAGCTCGA +
Preference number: 5 (lower is better)
Translates to: ARPQWQEPCPPSVTCSEFPWRSS*ISRAAR
Trigger: TCGAGCTGCGCGGCTGATCAAGCTGCTCCGCCAGGG...AAACTCAGAGCAAGTGACCGAGGGAGGACACGGCTCCTGCCACTGAGGCCGGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp CACAGGAGCCTCACCAAGGTGGGCAAGGCCTCCCCCGAGGGCCGGCTGCCCCGTAACGTCCGGAAGTTGTaGTGGCGGTTGATGCTGGTG +
Preference number: 5 (lower is better)
Translates to: HRSLTKVGKASPEGRLPRNVRKL*WRLMLV
Trigger: CACCAGCATCAACCGCCACAACAACTTCCGGACGTT...ACGGGGCAGCCGGCCCTCGGGGGAGGCCTTGCCCACCTTGGTGAGGCTCCTGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp CACAGGAGCCTCACCAAGGTGGGCAAGGCCTCCCCCGAGGGCCGGCTGCCCCGTGTCTTCTGGGGCAGATaGGCCCACACAACGGAAATC +
Preference number: 5 (lower is better)
Translates to: HRSLTKVGKASPEGRLPRVFWGR*AHTTEI
Trigger: GATTTCCGTTGTGTGGGCCAATCTGCCCCAGAAGAC...ACGGGGCAGCCGGCCCTCGGGGGAGGCCTTGCCCACCTTGGTGAGGCTCCTGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp ACCCGAGCTGAGTCCCAGGGTGCAGTGGTAACCGTTGGGCACGCGGCGGAGAGGGCCCCACAGCACTGCTaGGTGCGCCATCCATATCGG +
Preference number: 5 (lower is better)
Translates to: TRAESQGAVVTVGHAAERAPQHC*VRHPYR
Trigger: CCGATATGGATGGCGCACCAAGCAGTGCTGTGGGGC...CCTCTCCGCCGCGTGCCCAACGGTTACCACTGCACCCTGGGACTCAGCTCGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CAA 90 bp GAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGGCCCCACAGCACTGCTaGGTGCGCCATCCATATCGG +
Preference number: 5 (lower is better)
Translates to: EVSAHFQVGPASLCRTATAPQHC*VRHPYR
Trigger: CCGATATGGATGGCGCACCAAGCAGTGCTGTGGGGC...CGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp GAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGCTCTGCAGCAGGGCGTaGTGTTCGGAAAGCCCACGG +
Preference number: 5 (lower is better)
Translates to: EVSAHFQVGPASLCRTATLCSRA*CSESPR
Trigger: CCGTGGGCTTTCCGAACACAACGCCCTGCTGCAGAG...CGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp GTGCAGCTAGCACCAGTGGTCTTGGTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGAGGAGCGGCCCGAGTaGGTGGCCACAGCCTCCTCG +
Preference number: 5 (lower is better)
Translates to: VQLAPVVLVRVVVAVPCSEERPE*VATASS
Trigger: CGAGGAGGCTGTGGCCACCAACTCGGGCCGCTCCTC...CGAGCACGGCACAGCTACCACCACCCTGACCAAGACCACTGGTGCTAGCTGCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CAA 90 bp GCTTGCCTGAGTGAGCATTCGCTGACACTGGCGGGCTGCACAAGCCACGACTGTCGGGCTGGGGCCTCCTaGCCACAGGGGAAGTCACCC +
Preference number: 5 (lower is better)
Translates to: ACLSEHSLTLAGCTSHDCRAGAS*PQGKSP
Trigger: GGGTGACTTCCCCTGTGGCAAGGAGGCCCCAGCCCG...ACAGTCGTGGCTTGTGCAGCCCGCCAGTGTCAGCGAATGCTCACTCAGGCAAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp CACAGGAGCCTCACCAAGGTGGGCAAGGCCTCCCCCGAGGGCCGGCTGCCCCGTAGGTGTCGAAGTTGGTaGTGGGAGTCTCATCCTGGA +
Preference number: 5 (lower is better)
Translates to: HRSLTKVGKASPEGRLPRRCRSW*WESHPG
Trigger: TCCAGGATGAGACTCCCACAACCAACTTCGACACCT...ACGGGGCAGCCGGCCCTCGGGGGAGGCCTTGCCCACCTTGGTGAGGCTCCTGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp GTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGCCACCCGAGCTGAGTCCCAGGGTAGCCGTTTGATGGTCTaGAGGGGCCGCAGGACACGA +
Preference number: 5 (lower is better)
Translates to: VRVVVAVPCSATRAESQGSRLMV*RGRRTR
Trigger: TCGTGTCCTGCGGCCCCTCAAGACCATCAAACGGCT...ACCCTGGGACTCAGCTCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CAA 90 bp GTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCCCTTCCACTCGTGGGAGGAGGCCCTGGCGGAGCAGCTaGATCAGCCGCGCAGCTCGA +
Preference number: 5 (lower is better)
Translates to: VVSCPVASLETPSTRGRRPWRSS*ISRAAR
Trigger: TCGAGCTGCGCGGCTGATCAAGCTGCTCCGCCAGGG...CCTCCTCCCACGAGTGGAAGGGGTTTCCAAGGAAGCCACAGGGCAGCTGACCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp GCGGTCACGGTGCAGCTAGCACCAGTGGTCTTGGTCAGGGTGGTGGTAGCTGTGGCTCCTGGCCAGCTGTaGGCGACGTTGGGTGGCTGC +
Preference number: 5 (lower is better)
Translates to: AVTVQLAPVVLVRVVVAVAPGQL*ATLGGC
Trigger: GCAGCCACCCAACGTCGCCAACAGCTGGCCAGGAGC...CACAGCTACCACCACCCTGACCAAGACCACTGGTGCTAGCTGCACCGTGACCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CAA 90 bp GCTGTGCCGTGCTCGGCCACCCGAGCTGAGTCCCAGGGTGCAGTGGTAACCGTTCTCTGCAGCAGGGCGTaGTGTTCGGAAAGCCCACGG +
Preference number: 5 (lower is better)
Translates to: AVPCSATRAESQGAVVTVLCSRA*CSESPR
Trigger: CCGTGGGCTTTCCGAACACAACGCCCTGCTGCAGAG...AACGGTTACCACTGCACCCTGGGACTCAGCTCGGGTGGCCGAGCACGGCACAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CAA 90 bp GCTTGCCTGAGTGAGCATTCGCTGACACTGGCGGGCTGCACAAGCCACGACTGTGAGGAGCGGCCCGAGTaGGTGGCCACAGCCTCCTCG +
Preference number: 5 (lower is better)
Translates to: ACLSEHSLTLAGCTSHDCEERPE*VATASS
Trigger: CGAGGAGGCTGTGGCCACCAACTCGGGCCGCTCCTC...ACAGTCGTGGCTTGTGCAGCCCGCCAGTGTCAGCGAATGCTCACTCAGGCAAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp GAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGCCCAGGACACGGGATTaGGACTCCTGGGTCCTTCTC +
Preference number: 5 (lower is better)
Translates to: EVSAHFQVGPASLCRTATPRTRD*DSWVLL
Trigger: GAGAAGGACCCAGGAGTCCAAATCCCGTGTCCTGGG...CGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp CCCCTCCGTCCCGAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCGGGGTCAGACCTCACTaGACTGCCTGCTCCCTGTGT +
Preference number: 5 (lower is better)
Translates to: PLRPEVSAHFQVGPASLCGVRPH*TACSLC
Trigger: ACACAGGGAGCAGGCAGTCAAGTGAGGTCTGACCCC...GCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTCGGGACGGAGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS TCA 90 bp TCCTGGAGGAGCGGCCCGAGTTGGTGGCCACAGCCTCCTCGAAAGTaGGAGTGTCCTCAGGCAGGGCGTGGACAGAGGCCTCACTGTCCA +
Preference number: 5 (lower is better)
Translates to: SWRSGPSWWPQPPRK*ECPQAGRGQRPHCP
Trigger: TGGACAGTGAGGCCTCTGTCCACGCCCTGCCTGAGGACACTCTCACTTTCGAGGAGGCTGTGGCCACCAACTCGGGCCGCTCCTCCAGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp CCCCTCCGTCCCGAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCTCCGCATCTGTGCTGTaGGGGAAACAGGCCTTGTGG +
Preference number: 5 (lower is better)
Translates to: PLRPEVSAHFQVGPASLCSASVL*GKQALW
Trigger: CCACAAGGCCTGTTTCCCCAACAGCACAGATGCGGA...GCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTCGGGACGGAGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp GCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGCGGGCTGGGGCCTCCTaGCCACAGGGGAAGTCACCC +
Preference number: 5 (lower is better)
Translates to: AGCPVWMIKLIHWNTRLLRAGAS*PQGKSP
Trigger: GGGTGACTTCCCCTGTGGCAAGGAGGCCCCAGCCCG...CAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp GAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGAGCCAGTTCCAGGTGTaGCCGGCCGCATCGTTTGTA +
Preference number: 5 (lower is better)
Translates to: EVSAHFQVGPASLCRTATSQFQV*PAASFV
Trigger: TACAAACGATGCGGCCGGCAACACCTGGAACTGGCT...CGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp CCACGTGAAGGGTGCTCCCCACAGGACGCAGAGCTCCTCACAACGGCTCCAAGCACCCTCTCTCGCTCCTaGGCAAACTCCCCCGAGAGC +
Preference number: 5 (lower is better)
Translates to: PREGCSPQDAELLTTAPSTLSRS*ANSPES
Trigger: GCTCTCGGGGGAGTTTGCCAAGGAGCGAGAGAGGGT...GCTTGGAGCCGTTGTGAGGAGCTCTGCGTCCTGTGGGGAGCACCCTTCACGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp GTCTTGGTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGCCACCCGAGCTGAGTCCCACTCCAGGTACCCGTaGAGCTCTCGCTCGATCTGC +
Preference number: 5 (lower is better)
Translates to: VLVRVVVAVPCSATRAESHSRYP*SSRSIC
Trigger: GCAGATCGAGCGAGAGCTCAACGGGTACCTGGAGTG...GGACTCAGCTCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGACCAAGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CAA 90 bp TGGCGCCAGGACAGTGCTGGGCATCAGGTGCCCGGCCTCAGTGGCAGGAGCCGTTTTGCTGACGCCGCCTaGCGATTCGATCCCGTGATA +
Preference number: 5 (lower is better)
Translates to: WRQDSAGHQVPGLSGRSRFADAA*RFDPVI
Trigger: TATCACGGGATCGAATCGCAAGGCGGCGTCAGCAAA...ACGGCTCCTGCCACTGAGGCCGGGCACCTGATGCCCAGCACTGTCCTGGCGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp GAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGGACGAGAACATGCCTTaGCTGACGCCGCCTTGCGAT +
Preference number: 5 (lower is better)
Translates to: EVSAHFQVGPASLCRTATDENMP*LTPPCD
Trigger: ATCGCAAGGCGGCGTCAGCAAAGGCATGTTCTCGTC...CGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp CCCGAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCACACCGAGCGCGCCTaGGCCGAGTTCTGCTGCCTG +
Preference number: 5 (lower is better)
Translates to: PEGRLPRVDDKTHPLEHTHTERA*AEFCCL
Trigger: CAGGCAGCAGAACTCGGCCAAGGCGCGCTCGGTGTG...CGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp GGATTCTCGACCCAACACTGCCTGGGGAAATGGCTGTGGTTCTGCATGGAATGGGCCTCAGGTCGGGCTTaGCCTCCCACGGGCCCCCGC +
Preference number: 5 (lower is better)
Translates to: GFSTQHCLGKWLWFCMEWASGRA*PPTGPR
Trigger: GCGGGGGCCCGTGGGAGGCAAAGCCCGACCTGAGGC...CCATTCCATGCAGAACCACAGCCATTTCCCCAGGCAGTGTTGGGTCGAGAATCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp GAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCGGGGGTCTTGTCCTaGTCGCGGTGCCGGTGGTGC +
Preference number: 5 (lower is better)
Translates to: EGRLPRVDDKTHPLEHTPAGVLS*SRCRWC
Trigger: GCACCACCGGCACCGCGACAAGGACAAGACCCCCGC...AGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp GAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGAAGCGGCGGAGCAGGTaGGTGGGGCTTAAACAGAAC +
Preference number: 5 (lower is better)
Translates to: EVSAHFQVGPASLCRTATKRRSR*VGLKQN
Trigger: GTTCTGTTTAAGCCCCACCAACCTGCTCCGCCGCTT...CGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp GCACCAGTGGTCTTGGTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGCCACCCGAAGCCGTTTGATGGTCTaGAGGGGCCGCAGGACACGA +
Preference number: 5 (lower is better)
Translates to: APVVLVRVVVAVPCSATRSRLMV*RGRRTR
Trigger: TCGTGTCCTGCGGCCCCTCAAGACCATCAAACGGCT...TCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGACCAAGACCACTGGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CAA 90 bp TCGGCCACCCGAGCTGAGTCCCAGGGTGCAGTGGTAACCGTTGGGCACGCGGCGAACACAGCCTTGAGCTaGGGCAGCCGTTTGATGGTC +
Preference number: 5 (lower is better)
Translates to: SATRAESQGAVVTVGHAANTALS*GSRLMV
Trigger: GACCATCAAACGGCTGCCCAAGCTCAAGGCTGTGTT...CGCCGCGTGCCCAACGGTTACCACTGCACCCTGGGACTCAGCTCGGGTGGCCGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CAA 90 bp TGGCGCCAGGACAGTGCTGGGCATCAGGTGCCCGGCCTCAGTGGCAGGAGCCGTAACACAGCCTTGAGCTaGGGCAGCCGTTTGATGGTC +
Preference number: 5 (lower is better)
Translates to: WRQDSAGHQVPGLSGRSRNTALS*GSRLMV
Trigger: GACCATCAAACGGCTGCCCAAGCTCAAGGCTGTGTT...ACGGCTCCTGCCACTGAGGCCGGGCACCTGATGCCCAGCACTGTCCTGGCGCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp CCCCTCCGTCCCGAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCGAACGACTGCCGGTTTaGGGGCATGTACCGTGTCAG +
Preference number: 5 (lower is better)
Translates to: PLRPEVSAHFQVGPASLCERLPV*GHVPCQ
Trigger: CTGACACGGTACATGCCCCAAAACCGGCAGTCGTTC...GCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTCGGGACGGAGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp AGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGTTGTATGGCCCCGCCATaGCTGAGGGAGGTGGAACTC +
Preference number: 5 (lower is better)
Translates to: RSRRTFRWALLLCAARPRCMAPP*LREVEL
Trigger: GAGTTCCACCTCCCTCAGCAATGGCGGGGCCATACA...ACGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp CCACGTGAAGGGTGCTCCCCACAGGACGCAGAGCTCCTCACAACGGCTCCAAGCCTCTGCAGCAGGGCGTaGTGTTCGGAAAGCCCACGG +
Preference number: 5 (lower is better)
Translates to: PREGCSPQDAELLTTAPSLCSRA*CSESPR
Trigger: CCGTGGGCTTTCCGAACACAACGCCCTGCTGCAGAG...GCTTGGAGCCGTTGTGAGGAGCTCTGCGTCCTGTGGGGAGCACCCTTCACGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp GAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGGGACCTCCCAGCATCTaGTGCACCTTGGACAGTGTC +
Preference number: 5 (lower is better)
Translates to: EVSAHFQVGPASLCRTATGPPSI*CTLDSV
Trigger: GACACTGTCCAAGGTGCACAAGATGCTGGGAGGTCC...CGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS CCA 90 bp CATGGGACCCACAGTCACAGTCCCACTGGTCTCCAGGTCACAGTGTaGCTCCCGGGGCTGGTGGTTCCGGAGCTCCTTTTCCTTGTCGGC +
Preference number: 5 (lower is better)
Translates to: HGTHSHSPTGLQVTV*LPGLVVPELLFLVG
Trigger: GCCGACAAGGAAAAGGAGCTCCGGAACCACCAGCCCCGGGAGCCACACTGTGACCTGGAGACCAGTGGGACTGTGACTGTGGGTCCCATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp GTCTTGGTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGCCACCCGAGCTGAGTCCTCCGCATCTGTGCTGTaGGGGAAACAGGCCTTGTGG +
Preference number: 5 (lower is better)
Translates to: VLVRVVVAVPCSATRAESSASVL*GKQALW
Trigger: CCACAAGGCCTGTTTCCCCAACAGCACAGATGCGGA...GGACTCAGCTCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGACCAAGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CAA 90 bp CCCCTCCGTCCCGAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCTTGGTGATGCCAAAGTaGGGTCCTGGCCAGTACTCC +
Preference number: 5 (lower is better)
Translates to: PLRPEVSAHFQVGPASLCLVMPK*GPGQYS
Trigger: GGAGTACTGGCCAGGACCCAACTTTGGCATCACCAA...GCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTCGGGACGGAGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp GCTGTGCCGTGCTCGGCCACCCGAGCTGAGTCCCAGGGTGCAGTGGTAACCGTTAGCCAGTTCCAGGTGTaGCCGGCCGCATCGTTTGTA +
Preference number: 5 (lower is better)
Translates to: AVPCSATRAESQGAVVTVSQFQV*PAASFV
Trigger: TACAAACGATGCGGCCGGCAACACCTGGAACTGGCT...AACGGTTACCACTGCACCCTGGGACTCAGCTCGGGTGGCCGAGCACGGCACAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CAA 90 bp GTGCAGCTAGCACCAGTGGTCTTGGTCAGGGTGGTGGTAGCTGTGCCGTGCTCGACCCTCTCTCGCTCCTaGGCAAACTCCCCCGAGAGC +
Preference number: 5 (lower is better)
Translates to: VQLAPVVLVRVVVAVPCSTLSRS*ANSPES
Trigger: GCTCTCGGGGGAGTTTGCCAAGGAGCGAGAGAGGGT...CGAGCACGGCACAGCTACCACCACCCTGACCAAGACCACTGGTGCTAGCTGCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CAA 90 bp GTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCCCTTCCACTCGTGGGAGGAGGACCCTCTCTCGCTCCTaGGCAAACTCCCCCGAGAGC +
Preference number: 5 (lower is better)
Translates to: VVSCPVASLETPSTRGRRTLSRS*ANSPES
Trigger: GCTCTCGGGGGAGTTTGCCAAGGAGCGAGAGAGGGT...CCTCCTCCCACGAGTGGAAGGGGTTTCCAAGGAAGCCACAGGGCAGCTGACCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp CCCGAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGTCTGTCTTCCCGCTCTaGAGGCTGGCGCGGGCGAAG +
Preference number: 5 (lower is better)
Translates to: PEGRLPRVDDKTHPLEHTSVFPL*RLARAK
Trigger: CTTCGCCCGCGCCAGCCTCAAGAGCGGGAAGACAGA...CGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp CCCCTCCGTCCCGAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCTTTGCTGACGCCGCCTaGCGATTCGATCCCGTGATA +
Preference number: 5 (lower is better)
Translates to: PLRPEVSAHFQVGPASLCFADAA*RFDPVI
Trigger: TATCACGGGATCGAATCGCAAGGCGGCGTCAGCAAA...GCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTCGGGACGGAGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp GCTGTGCCGTGCTCGGCCACCCGAGCTGAGTCCCAGGGTGCAGTGGTAACCGTTGACGAGAACATGCCTTaGCTGACGCCGCCTTGCGAT +
Preference number: 5 (lower is better)
Translates to: AVPCSATRAESQGAVVTVDENMP*LTPPCD
Trigger: ATCGCAAGGCGGCGTCAGCAAAGGCATGTTCTCGTC...AACGGTTACCACTGCACCCTGGGACTCAGCTCGGGTGGCCGAGCACGGCACAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CAA 90 bp TGGCGCCAGGACAGTGCTGGGCATCAGGTGCCCGGCCTCAGTGGCAGGAGCCGTATCTCCTCTTCATCCTaGGTCAGCTCTTGGGCGTTG +
Preference number: 5 (lower is better)
Translates to: WRQDSAGHQVPGLSGRSRISSSS*VSSWAL
Trigger: CAACGCCCAAGAGCTGACCAAGGATGAAGAGGAGAT...ACGGCTCCTGCCACTGAGGCCGGGCACCTGATGCCCAGCACTGTCCTGGCGCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp TCTTCACCAAACAAGGGACCTCCCAGCATCTTGTGCACCTTGGACAGTGTCCTGGCCTCAGGTCGGGCTTaGCCTCCCACGGGCCCCCGC +
Preference number: 5 (lower is better)
Translates to: SSPNKGPPSILCTLDSVLASGRA*PPTGPR
Trigger: GCGGGGGCCCGTGGGAGGCAAAGCCCGACCTGAGGC...CAGGACACTGTCCAAGGTGCACAAGATGCTGGGAGGTCCCTTGTTTGGTGAAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp GCTAGGCTGTGTGGGTTTAGAAAAGTGGATTCTCGACCCAACACTGCCTGGGGACCCGCCGCGGGGGTCTaGTCCTTGTCGCGGTGCCGG +
Preference number: 5 (lower is better)
Translates to: ARLCGFRKVDSRPNTAWGPAAGV*SLSRCR
Trigger: CCGGCACCGCGACAAGGACAAGACCCCCGCGGCGGG...TCCCCAGGCAGTGTTGGGTCGAGAATCCACTTTTCTAAACCCACACAGCCTAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp CTCGTGGGAGGAGGACAGCAAATGGCTGCCTTGTTTGCCACCATGACATCCAGTGCGCCGGCGCACTCCTaGCTCGGATCCTGGTGCCGG +
Preference number: 5 (lower is better)
Translates to: LVGGGQQMAALFATMTSSAPAHS*LGSWCR
Trigger: CCGGCACCAGGATCCGAGCAAGGAGTGCGCCGGCGC...ACTGGATGTCATGGTGGCAAACAAGGCAGCCATTTGCTGTCCTCCTCCCACGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp CCCCTCCGTCCCGAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCTTCTTCCCCTCTGCTaGGCTTTCCAGGTCCACGTT +
Preference number: 5 (lower is better)
Translates to: PLRPEVSAHFQVGPASLCLLPLC*AFQVHV
Trigger: AACGTGGACCTGGAAAGCCAAGCAGAGGGGAAGAAG...GCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTCGGGACGGAGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp CCACGTGAAGGGTGCTCCCCACAGGACGCAGAGCTCCTCACAACGGCTCCAAGCAGCCGTTTGATGGTCTaGAGGGGCCGCAGGACACGA +
Preference number: 5 (lower is better)
Translates to: PREGCSPQDAELLTTAPSSRLMV*RGRRTR
Trigger: TCGTGTCCTGCGGCCCCTCAAGACCATCAAACGGCT...GCTTGGAGCCGTTGTGAGGAGCTCTGCGTCCTGTGGGGAGCACCCTTCACGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp GTGCAGCTAGCACCAGTGGTCTTGGTCAGGGTGGTGGTAGCTGTGCCGTGCTCGAGCTTGGGCAGCCGTTaGATGGTCTTGAGGGGCCGC +
Preference number: 5 (lower is better)
Translates to: VQLAPVVLVRVVVAVPCSSLGSR*MVLRGR
Trigger: GCGGCCCCTCAAGACCATCAAACGGCTGCCCAAGCT...CGAGCACGGCACAGCTACCACCACCCTGACCAAGACCACTGGTGCTAGCTGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CAA 90 bp CGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTCTTGGTCAGGGTGGTGGTAGCTTGGGCAGCCGTTaGATGGTCTTGAGGGGCCGC +
Preference number: 5 (lower is better)
Translates to: RLSGHGAASTSGLGQGGGSLGSR*MVLRGR
Trigger: GCGGCCCCTCAAGACCATCAAACGGCTGCCCAAGCT...ACCACCACCCTGACCAAGACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CAA 90 bp GAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGCAGTCAAACACAGCCTaGAGCTTGGGCAGCCGTTTG +
Preference number: 5 (lower is better)
Translates to: EVSAHFQVGPASLCRTATQSNTA*SLGSRL
Trigger: CAAACGGCTGCCCAAGCTCAAGGCTGTGTTTGACTG...CGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp CGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTCTTGGTCAGGGTGGTGGTTGCGGTACCCAGGGCTaGGACCCTGCTCCTCATAGG +
Preference number: 5 (lower is better)
Translates to: RLSGHGAASTSGLGQGGGCGTQG*DPAPHR
Trigger: CCTATGAGGAGCAGGGTCCAAGCCCTGGGTACCGCA...ACCACCACCCTGACCAAGACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CAA 90 bp GCGGTCACGGTGCAGCTAGCACCAGTGGTCTTGGTCAGGGTGGTGGTAGCTGTGTGCGGTACCCAGGGCTaGGACCCTGCTCCTCATAGG +
Preference number: 5 (lower is better)
Translates to: AVTVQLAPVVLVRVVVAVCGTQG*DPAPHR
Trigger: CCTATGAGGAGCAGGGTCCAAGCCCTGGGTACCGCA...CACAGCTACCACCACCCTGACCAAGACCACTGGTGCTAGCTGCACCGTGACCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CAA 90 bp TTGGTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGCCACCCGAGCTGAGTCCCAGGAACGACTGCCGGTTTaGGGGCATGTACCGTGTCAG +
Preference number: 5 (lower is better)
Translates to: LVRVVVAVPCSATRAESQERLPV*GHVPCQ
Trigger: CTGACACGGTACATGCCCCAAAACCGGCAGTCGTTC...CTGGGACTCAGCTCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGACCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CAA 90 bp AGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGTGAACGACTGCCGGTTTaGGGGCATGTACCGTGTCAG +
Preference number: 5 (lower is better)
Translates to: RSRRTFRWALLLCAARPRERLPV*GHVPCQ
Trigger: CTGACACGGTACATGCCCCAAAACCGGCAGTCGTTC...ACGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp CGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTCTTGGTCAGGGTGGTGGTCCACACTCGGTGGCATaGGCCTGCTCATCACAGGCC +
Preference number: 5 (lower is better)
Translates to: RLSGHGAASTSGLGQGGGPHSVA*ACSSQA
Trigger: GGCCTGTGATGAGCAGGCCAATGCCACCGAGTGTGG...ACCACCACCCTGACCAAGACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CAA 90 bp GCTGCATGCAGGCGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTCTTGGTCCACACTCGGTGGCATaGGCCTGCTCATCACAGGCC +
Preference number: 5 (lower is better)
Translates to: AACRRLSGHGAASTSGLGPHSVA*ACSSQA
Trigger: GGCCTGTGATGAGCAGGCCAATGCCACCGAGTGTGG...ACCAAGACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACGCCTGCATGCAGC
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CAA 90 bp GCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGCCAGCTGGGGCCAGCTaGATCTCCAGTGCCGTCCGG +
Preference number: 5 (lower is better)
Translates to: AGCPVWMIKLIHWNTRLLPAGAS*ISSAVR
Trigger: CCGGACGGCACTGGAGATCAAGCTGGCCCCAGCTGG...CAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp GCCCGGCCTCAGTGGCAGGAGCCGTGTCCTCCCTCGGTCACTTGCTCTGAGTTTTGTATGGCCCCGCCATaGCTGAGGGAGGTGGAACTC +
Preference number: 5 (lower is better)
Translates to: ARPQWQEPCPPSVTCSEFCMAPP*LREVEL
Trigger: GAGTTCCACCTCCCTCAGCAATGGCGGGGCCATACA...AAACTCAGAGCAAGTGACCGAGGGAGGACACGGCTCCTGCCACTGAGGCCGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp TGGCGCCAGGACAGTGCTGGGCATCAGGTGCCCGGCCTCAGTGGCAGGAGCCGTTTTGATGCCACTCTCTaGGTTTTGTATGGCCCCGCC +
Preference number: 5 (lower is better)
Translates to: WRQDSAGHQVPGLSGRSRFDATL*VLYGPA
Trigger: GGCGGGGCCATACAAAACCAAGAGAGTGGCATCAAA...ACGGCTCCTGCCACTGAGGCCGGGCACCTGATGCCCAGCACTGTCCTGGCGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp TTGGTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGCCACCCGAGCTGAGTCCCAGTGCATCCTGGGTCCTTaGAGTGCCCCAGGAGACAGA +
Preference number: 5 (lower is better)
Translates to: LVRVVVAVPCSATRAESQCILGP*SAPGDR
Trigger: TCTGTCTCCTGGGGCACTCAAAGGACCCAGGATGCA...CTGGGACTCAGCTCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGACCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CAA 90 bp TCCAGGGAGGACAGAGCTTGCCTGAGTGAGCATTCGCTGACACTGGCGGGCTGCCTCTGCAGCAGGGCGTaGTGTTCGGAAAGCCCACGG +
Preference number: 5 (lower is better)
Translates to: SREDRACLSEHSLTLAGCLCSRA*CSESPR
Trigger: CCGTGGGCTTTCCGAACACAACGCCCTGCTGCAGAG...GCAGCCCGCCAGTGTCAGCGAATGCTCACTCAGGCAAGCTCTGTCCTCCCTGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp CCACGTGAAGGGTGCTCCCCACAGGACGCAGAGCTCCTCACAACGGCTCCAAGCGGGGTCAGACCTCACTaGACTGCCTGCTCCCTGTGT +
Preference number: 5 (lower is better)
Translates to: PREGCSPQDAELLTTAPSGVRPH*TACSLC
Trigger: ACACAGGGAGCAGGCAGTCAAGTGAGGTCTGACCCC...GCTTGGAGCCGTTGTGAGGAGCTCTGCGTCCTGTGGGGAGCACCCTTCACGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp GGATTCTCGACCCAACACTGCCTGGGGAAATGGCTGTGGTTCTGCATGGAATGGCGGGCTGGGGCCTCCTaGCCACAGGGGAAGTCACCC +
Preference number: 5 (lower is better)
Translates to: GFSTQHCLGKWLWFCMEWRAGAS*PQGKSP
Trigger: GGGTGACTTCCCCTGTGGCAAGGAGGCCCCAGCCCG...CCATTCCATGCAGAACCACAGCCATTTCCCCAGGCAGTGTTGGGTCGAGAATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp GCGGTCACGGTGCAGCTAGCACCAGTGGTCTTGGTCAGGGTGGTGGTAGCTGTGCACTCCAGGTACCCGTaGAGCTCTCGCTCGATCTGC +
Preference number: 5 (lower is better)
Translates to: AVTVQLAPVVLVRVVVAVHSRYP*SSRSIC
Trigger: GCAGATCGAGCGAGAGCTCAACGGGTACCTGGAGTG...CACAGCTACCACCACCCTGACCAAGACCACTGGTGCTAGCTGCACCGTGACCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CAA 90 bp GAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTTCTGTCTTCCCGCTCTaGAGGCTGGCGCGGGCGAAG +
Preference number: 5 (lower is better)
Translates to: EGRLPRVDDKTHPLEHTPSVFPL*RLARAK
Trigger: CTTCGCCCGCGCCAGCCTCAAGAGCGGGAAGACAGA...AGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp GCTGAGTCCCAGGGTGCAGTGGTAACCGTTGGGCACGCGGCGGAGAGGGTGAGAGGGAAGGTGTCGAAGTaGGTTGTGGGAGTCTCATCC +
Preference number: 5 (lower is better)
Translates to: AESQGAVVTVGHAAERVRGKVSK*VVGVSS
Trigger: GGATGAGACTCCCACAACCAACTTCGACACCTTCCC...TCTCACCCTCTCCGCCGCGTGCCCAACGGTTACCACTGCACCCTGGGACTCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CAA 90 bp AGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGTGGGAAGGTGTCGAAGTaGGTTGTGGGAGTCTCATCC +
Preference number: 5 (lower is better)
Translates to: RSRRTFRWALLLCAARPRGKVSK*VVGVSS
Trigger: GGATGAGACTCCCACAACCAACTTCGACACCTTCCC...ACGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp GTCTTGGTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGCCACCCGAGCTGAGTCCTTTGCTGACGCCGCCTaGCGATTCGATCCCGTGATA +
Preference number: 5 (lower is better)
Translates to: VLVRVVVAVPCSATRAESFADAA*RFDPVI
Trigger: TATCACGGGATCGAATCGCAAGGCGGCGTCAGCAAA...GGACTCAGCTCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGACCAAGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CAA 90 bp GCTAGGCTGTGTGGGTTTAGAAAAGTGGATTCTCGACCCAACACTGCCTGGGGAGCGCCGGCGCACTCCTaGCTCGGATCCTGGTGCCGG +
Preference number: 5 (lower is better)
Translates to: ARLCGFRKVDSRPNTAWGAPAHS*LGSWCR
Trigger: CCGGCACCAGGATCCGAGCAAGGAGTGCGCCGGCGC...TCCCCAGGCAGTGTTGGGTCGAGAATCCACTTTTCTAAACCCACACAGCCTAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp AGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGTCTTCTTCCCCTCTGCTaGGCTTTCCAGGTCCACGTT +
Preference number: 5 (lower is better)
Translates to: RSRRTFRWALLLCAARPRLLPLC*AFQVHV
Trigger: AACGTGGACCTGGAAAGCCAAGCAGAGGGGAAGAAG...ACGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp GTCTTGGTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGCCACCCGAGCTGAGTCCAACGTCCGGAAGTTGTaGTGGCGGTTGATGCTGGTG +
Preference number: 5 (lower is better)
Translates to: VLVRVVVAVPCSATRAESNVRKL*WRLMLV
Trigger: CACCAGCATCAACCGCCACAACAACTTCCGGACGTT...GGACTCAGCTCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGACCAAGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CAA 90 bp TGGCGCCAGGACAGTGCTGGGCATCAGGTGCCCGGCCTCAGTGGCAGGAGCCGTAAAAACGTCCGGAAGTaGTTGTGGCGGTTGATGCTG +
Preference number: 5 (lower is better)
Translates to: WRQDSAGHQVPGLSGRSRKNVRK*LWRLML
Trigger: CAGCATCAACCGCCACAACAACTTCCGGACGTTTTT...ACGGCTCCTGCCACTGAGGCCGGGCACCTGATGCCCAGCACTGTCCTGGCGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp CCCCTCCGTCCCGAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCAGCAGCATCAGGGCTaGCAAAAACGTCCGGAAGTT +
Preference number: 5 (lower is better)
Translates to: PLRPEVSAHFQVGPASLCQQHQG*QKRPEV
Trigger: AACTTCCGGACGTTTTTGCAAGCCCTGATGCTGCTG...GCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTCGGGACGGAGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp CGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTCTTGGTCAGGGTGGTGGTTGTATGGCCCCGCCATaGCTGAGGGAGGTGGAACTC +
Preference number: 5 (lower is better)
Translates to: RLSGHGAASTSGLGQGGGCMAPP*LREVEL
Trigger: GAGTTCCACCTCCCTCAGCAATGGCGGGGCCATACA...ACCACCACCCTGACCAAGACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CAA 90 bp CCCCTCCGTCCCGAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCTTTGATGCCACTCTCTaGGTTTTGTATGGCCCCGCC +
Preference number: 5 (lower is better)
Translates to: PLRPEVSAHFQVGPASLCFDATL*VLYGPA
Trigger: GGCGGGGCCATACAAAACCAAGAGAGTGGCATCAAA...GCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTCGGGACGGAGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp GCTTGCCTGAGTGAGCATTCGCTGACACTGGCGGGCTGCACAAGCCACGACTGTCTGGCGGTCAGGCACTaGGTCAAGAGCAGCAGAGCC +
Preference number: 5 (lower is better)
Translates to: ACLSEHSLTLAGCTSHDCLAVRH*VKSSRA
Trigger: GGCTCTGCTGCTCTTGACCAAGTGCCTGACCGCCAG...ACAGTCGTGGCTTGTGCAGCCCGCCAGTGTCAGCGAATGCTCACTCAGGCAAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp CCCGAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGTCCACTGGCAAGGGCTaGCTACCTGGCTGCCATCGC +
Preference number: 5 (lower is better)
Translates to: PEGRLPRVDDKTHPLEHTSTGKG*LPGCHR
Trigger: GCGATGGCAGCCAGGTAGCAAGCCCTTGCCAGTGGA...CGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp GAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGAGCATCTTGTGCACCTaGGACAGTGTCCTGAGCATG +
Preference number: 5 (lower is better)
Translates to: EVSAHFQVGPASLCRTATSILCT*DSVLSM
Trigger: CATGCTCAGGACACTGTCCAAGGTGCACAAGATGCT...CGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp CCACGTGAAGGGTGCTCCCCACAGGACGCAGAGCTCCTCACAACGGCTCCAAGCGGACCTCCCAGCATCTaGTGCACCTTGGACAGTGTC +
Preference number: 5 (lower is better)
Translates to: PREGCSPQDAELLTTAPSGPPSI*CTLDSV
Trigger: GACACTGTCCAAGGTGCACAAGATGCTGGGAGGTCC...GCTTGGAGCCGTTGTGAGGAGCTCTGCGTCCTGTGGGGAGCACCCTTCACGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS GCA 90 bp GTCTGGGGGCTGACTGCCCATGCGAGTGACGTTCCGCTGATTGTCTaGATCCTCTGGCTGTTCCTCCACCTTCTGGAGACAGGTGCTGGG +
Preference number: 5 (lower is better)
Translates to: VWGLTAHASDVPLIV*ILWLFLHLLETGAG
Trigger: CCCAGCACCTGTCTCCAGAAGGTGGAGGAACAGCCAGAGGATGCAGACAATCAGCGGAACGTCACTCGCATGGGCAGTCAGCCCCCAGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS GCA 90 bp GCCGCTCCTCATCACGTCATCCGCTTCCACCTCCTTCTTCCCCTCTaGTTGGCTTTCCAGGTCCACGTTACCACTGGGAACGACCGTGGC +
Preference number: 5 (lower is better)
Translates to: AAPHHVIRFHLLLPL*LAFQVHVTTGNDRG
Trigger: GCCACGGTCGTTCCCAGTGGTAACGTGGACCTGGAAAGCCAAGCAGAGGGGAAGAAGGAGGTGGAAGCGGATGACGTGATGAGGAGCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp ACGCCTGCTGCATGCAGGCGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTGCACCACCTGCAAACTaGGAATCCCAGACACCAGCT +
Preference number: 5 (lower is better)
Translates to: TPAACRRLSGHGAASTSGAPPAN*ESQTPA
Trigger: AGCTGGTGTCTGGGATTCCAAGTTTGCAGGTGGTGC...ACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACGCCTGCATGCAGCAGGCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CAA 90 bp GCTGCATGCAGGCGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTCTTGGTTCCGCATCTGTGCTGTaGGGGAAACAGGCCTTGTGG +
Preference number: 5 (lower is better)
Translates to: AACRRLSGHGAASTSGLGSASVL*GKQALW
Trigger: CCACAAGGCCTGTTTCCCCAACAGCACAGATGCGGA...ACCAAGACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACGCCTGCATGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CAA 90 bp CGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGCATGCAGGCGTCGGGCTGGGGCCTCCTaGCCACAGGGGAAGTCACCC +
Preference number: 5 (lower is better)
Translates to: RVDDKTHPLEHTPAACRRRAGAS*PQGKSP
Trigger: GGGTGACTTCCCCTGTGGCAAGGAGGCCCCAGCCCG...ACGCCTGCATGCAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp TCCAGGGAGGACAGAGCTTGCCTGAGTGAGCATTCGCTGACACTGGCGGGCTGCAGCCAGTTCCAGGTGTaGCCGGCCGCATCGTTTGTA +
Preference number: 5 (lower is better)
Translates to: SREDRACLSEHSLTLAGCSQFQV*PAASFV
Trigger: TACAAACGATGCGGCCGGCAACACCTGGAACTGGCT...GCAGCCCGCCAGTGTCAGCGAATGCTCACTCAGGCAAGCTCTGTCCTCCCTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp GTCTTGGTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGCCACCCGAGCTGAGTCCATGACTTCCTCCGCCTaGAAGATCCACTCCAGGTAC +
Preference number: 5 (lower is better)
Translates to: VLVRVVVAVPCSATRAESMTSSA*KIHSRY
Trigger: GTACCTGGAGTGGATCTTCAAGGCGGAGGAAGTCAT...GGACTCAGCTCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGACCAAGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CAA 90 bp GTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCCCTTCCACTCGTGGGAGGAGGGACGAGAACATGCCTTaGCTGACGCCGCCTTGCGAT +
Preference number: 5 (lower is better)
Translates to: VVSCPVASLETPSTRGRRDENMP*LTPPCD
Trigger: ATCGCAAGGCGGCGTCAGCAAAGGCATGTTCTCGTC...CCTCCTCCCACGAGTGGAAGGGGTTTCCAAGGAAGCCACAGGGCAGCTGACCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp GCACCAGTGGTCTTGGTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGCCACCCGAATCTCCTCTTCATCCTaGGTCAGCTCTTGGGCGTTG +
Preference number: 5 (lower is better)
Translates to: APVVLVRVVVAVPCSATRISSSS*VSSWAL
Trigger: CAACGCCCAAGAGCTGACCAAGGATGAAGAGGAGAT...TCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGACCAAGACCACTGGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CAA 90 bp AGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGTATCTCCTCTTCATCCTaGGTCAGCTCTTGGGCGTTG +
Preference number: 5 (lower is better)
Translates to: RSRRTFRWALLLCAARPRISSSS*VSSWAL
Trigger: CAACGCCCAAGAGCTGACCAAGGATGAAGAGGAGAT...ACGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp CCCCTCCGTCCCGAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCACTTCAGCCACTTCTTaGGCCTTTTGCAGAGCAAGC +
Preference number: 5 (lower is better)
Translates to: PLRPEVSAHFQVGPASLCTSATS*AFCRAS
Trigger: GCTTGCTCTGCAAAAGGCCAAAGAAGTGGCTGAAGT...GCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTCGGGACGGAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp GGATTCTCGACCCAACACTGCCTGGGGAAATGGCTGTGGTTCTGCATGGAATGGCACACCGAGCGCGCCTaGGCCGAGTTCTGCTGCCTG +
Preference number: 5 (lower is better)
Translates to: GFSTQHCLGKWLWFCMEWHTERA*AEFCCL
Trigger: CAGGCAGCAGAACTCGGCCAAGGCGCGCTCGGTGTG...CCATTCCATGCAGAACCACAGCCATTTCCCCAGGCAGTGTTGGGTCGAGAATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp GCTAGGCTGTGTGGGTTTAGAAAAGTGGATTCTCGACCCAACACTGCCTGGGGAGCGGGGGTCTTGTCCTaGTCGCGGTGCCGGTGGTGC +
Preference number: 5 (lower is better)
Translates to: ARLCGFRKVDSRPNTAWGAGVLS*SRCRWC
Trigger: GCACCACCGGCACCGCGACAAGGACAAGACCCCCGC...TCCCCAGGCAGTGTTGGGTCGAGAATCCACTTTTCTAAACCCACACAGCCTAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp GCGGTCACGGTGCAGCTAGCACCAGTGGTCTTGGTCAGGGTGGTGGTAGCTGTGAAGCGGCGGAGCAGGTaGGTGGGGCTTAAACAGAAC +
Preference number: 5 (lower is better)
Translates to: AVTVQLAPVVLVRVVVAVKRRSR*VGLKQN
Trigger: GTTCTGTTTAAGCCCCACCAACCTGCTCCGCCGCTT...CACAGCTACCACCACCCTGACCAAGACCACTGGTGCTAGCTGCACCGTGACCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CAA 90 bp GCACCAGTGGTCTTGGTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGCCACCCGAAGGTATTTCAGAGCGTaGTTCCTGGGCGAGTCTGTG +
Preference number: 5 (lower is better)
Translates to: APVVLVRVVVAVPCSATRRYFRA*FLGESV
Trigger: CACAGACTCGCCCAGGAACAACGCTCTGAAATACCT...TCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGACCAAGACCACTGGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CAA 90 bp CCCGAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGAGCCGTTTGATGGTCTaGAGGGGCCGCAGGACACGA +
Preference number: 5 (lower is better)
Translates to: PEGRLPRVDDKTHPLEHTSRLMV*RGRRTR
Trigger: TCGTGTCCTGCGGCCCCTCAAGACCATCAAACGGCT...CGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp ACGCCTGCTGCATGCAGGCGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTAACACAGCCTTGAGCTaGGGCAGCCGTTTGATGGTC +
Preference number: 5 (lower is better)
Translates to: TPAACRRLSGHGAASTSGNTALS*GSRLMV
Trigger: GACCATCAAACGGCTGCCCAAGCTCAAGGCTGTGTT...ACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACGCCTGCATGCAGCAGGCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CAA 90 bp CCACGTGAAGGGTGCTCCCCACAGGACGCAGAGCTCCTCACAACGGCTCCAAGCCAGTCAAACACAGCCTaGAGCTTGGGCAGCCGTTTG +
Preference number: 5 (lower is better)
Translates to: PREGCSPQDAELLTTAPSQSNTA*SLGSRL
Trigger: CAAACGGCTGCCCAAGCTCAAGGCTGTGTTTGACTG...GCTTGGAGCCGTTGTGAGGAGCTCTGCGTCCTGTGGGGAGCACCCTTCACGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp TCGGCCACCCGAGCTGAGTCCCAGGGTGCAGTGGTAACCGTTGGGCACGCGGCGCGGAGGAAGCTGAGGTaGATGAAATTGTTCGTTTCC +
Preference number: 5 (lower is better)
Translates to: SATRAESQGAVVTVGHAARRKLR*MKLFVS
Trigger: GGAAACGAACAATTTCATCAACCTCAGCTTCCTCCG...CGCCGCGTGCCCAACGGTTACCACTGCACCCTGGGACTCAGCTCGGGTGGCCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000277551.6
CDS-3UTR CAA 90 bp GCCCGGCCTCAGTGGCAGGAGCCGTGTCCTCCCTCGGTCACTTGCTCTGAGTTTAACGTCCGGAAGTTGTaGTGGCGGTTGATGCTGGTG +
Preference number: 5 (lower is better)
Translates to: ARPQWQEPCPPSVTCSEFNVRKL*WRLMLV
Trigger: CACCAGCATCAACCGCCACAACAACTTCCGGACGTT...AAACTCAGAGCAAGTGACCGAGGGAGGACACGGCTCCTGCCACTGAGGCCGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp GTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGCCACCCGAGCTGAGTCCCAGGGTAAAAACGTCCGGAAGTaGTTGTGGCGGTTGATGCTG +
Preference number: 5 (lower is better)
Translates to: VRVVVAVPCSATRAESQGKNVRK*LWRLML
Trigger: CAGCATCAACCGCCACAACAACTTCCGGACGTTTTT...ACCCTGGGACTCAGCTCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CAA 90 bp GCACCAGTGGTCTTGGTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGCCACCCGACAGCAGCATCAGGGCTaGCAAAAACGTCCGGAAGTT +
Preference number: 5 (lower is better)
Translates to: APVVLVRVVVAVPCSATRQQHQG*QKRPEV
Trigger: AACTTCCGGACGTTTTTGCAAGCCCTGATGCTGCTG...TCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGACCAAGACCACTGGTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CAA 90 bp GAAAATGCCTCACACAAGCACGTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCCCAGCTGGGGCCAGCTaGATCTCCAGTGCCGTCCGG +
Preference number: 5 (lower is better)
Translates to: ENASHKHVVSCPVASLETPAGAS*ISSAVR
Trigger: CCGGACGGCACTGGAGATCAAGCTGGCCCCAGCTGG...GGTTTCCAAGGAAGCCACAGGGCAGCTGACCACGTGCTTGTGTGAGGCATTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp GCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGGCCCCACAGCACTGCTaGGTGCGCCATCCATATCGG +
Preference number: 5 (lower is better)
Translates to: AGCPVWMIKLIHWNTRLLAPQHC*VRHPYR
Trigger: CCGATATGGATGGCGCACCAAGCAGTGCTGTGGGGC...CAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp CGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGCATGCAGGCGTCTGCTGAGGGAGGGCTaGGGCTTCGGGGGCTCACGG +
Preference number: 5 (lower is better)
Translates to: RVDDKTHPLEHTPAACRRLLREG*GFGGSR
Trigger: CCGTGAGCCCCCGAAGCCCAAGCCCTCCCTCAGCAG...ACGCCTGCATGCAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp CCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGCATGCAGGCGCTCCTGGCCAGCTGTaGGCGACGTTGGGTGGCTGC +
Preference number: 5 (lower is better)
Translates to: PVWMIKLIHWNTRLLHAGAPGQL*ATLGGC
Trigger: GCAGCCACCCAACGTCGCCAACAGCTGGCCAGGAGC...GCCTGCATGCAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp GAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTCTCTGCAGCAGGGCGTaGTGTTCGGAAAGCCCACGG +
Preference number: 5 (lower is better)
Translates to: EGRLPRVDDKTHPLEHTPLCSRA*CSESPR
Trigger: CCGTGGGCTTTCCGAACACAACGCCCTGCTGCAGAG...AGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp TCTTCACCAAACAAGGGACCTCCCAGCATCTTGTGCACCTTGGACAGTGTCCTGGAGGAGCGGCCCGAGTaGGTGGCCACAGCCTCCTCG +
Preference number: 5 (lower is better)
Translates to: SSPNKGPPSILCTLDSVLEERPE*VATASS
Trigger: CGAGGAGGCTGTGGCCACCAACTCGGGCCGCTCCTC...CAGGACACTGTCCAAGGTGCACAAGATGCTGGGAGGTCCCTTGTTTGGTGAAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp CCTGCTGCATGCAGGCGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTCTTCTAGCACCAGTGGTCTaGGTCAGGGTGGTGGTAGCT +
Preference number: 5 (lower is better)
Translates to: PAACRRLSGHGAASTSGLLAPVV*VRVVVA
Trigger: AGCTACCACCACCCTGACCAAGACCACTGGTGCTAG...AAGACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACGCCTGCATGCAGCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CAA 90 bp CGGTTTAGGGTCTGGTGTGTGGTACGAGACCCAGGAAGGCAGGACAGGAAGGGGCCCAGGACACGGGATTaGGACTCCTGGGTCCTTCTC +
Preference number: 5 (lower is better)
Translates to: RFRVWCVVRDPGRQDRKGPRTRD*DSWVLL
Trigger: GAGAAGGACCCAGGAGTCCAAATCCCGTGTCCTGGG...CCCCTTCCTGTCCTGCCTTCCTGGGTCTCGTACCACACACCAGACCCTAAACCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp GAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTTCCACTGGCAAGGGCTaGCTACCTGGCTGCCATCGC +
Preference number: 5 (lower is better)
Translates to: EGRLPRVDDKTHPLEHTPSTGKG*LPGCHR
Trigger: GCGATGGCAGCCAGGTAGCAAGCCCTTGCCAGTGGA...AGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp CCCCTCCGTCCCGAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCAACTACAGCCACTGCTaGACTGGTTCCAGATGCAGA +
Preference number: 5 (lower is better)
Translates to: PLRPEVSAHFQVGPASLCNYSHC*TGSRCR
Trigger: TCTGCATCTGGAACCAGTCAAGCAGTGGCTGTAGTT...GCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTCGGGACGGAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp GAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGAACTACAGCCACTGCTaGACTGGTTCCAGATGCAGA +
Preference number: 5 (lower is better)
Translates to: EVSAHFQVGPASLCRTATNYSHC*TGSRCR
Trigger: TCTGCATCTGGAACCAGTCAAGCAGTGGCTGTAGTT...CGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp TGGCGCCAGGACAGTGCTGGGCATCAGGTGCCCGGCCTCAGTGGCAGGAGCCGTCGGAGGAAGCTGAGGTaGATGAAATTGTTCGCAATC +
Preference number: 5 (lower is better)
Translates to: WRQDSAGHQVPGLSGRSRRRKLR*MKLFAI
Trigger: GATTGCGAACAATTTCATCAACCTCAGCTTCCTCCG...ACGGCTCCTGCCACTGAGGCCGGGCACCTGATGCCCAGCACTGTCCTGGCGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371357.5
ENST00000371363.5
CDS TCA 90 bp TCTCCTTCCTCCGGAAGTATGACGAGCTCTCTGTCTTCCCGCTCTTaGGGCTGGCGCGGGCGAAGGGGGATCCAACAGCACAGAGATCTG +
Preference number: 5 (lower is better)
Translates to: SPSSGSMTSSLSSRS*GWRGRRGIQQHRDL
Trigger: CAGATCTCTGTGCTGTTGGATCCCCCTTCGCCCGCGCCAGCCTCAAGAGCGGGAAGACAGAGAGCTCGTCATACTTCCGGAGGAAGGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS CCA 90 bp GTCACAGTCCCACTGGTCTCCAGGTCACAGTGTGGCTCCCGGGGCTaGTGGTTCCGGAGCTCCTTTTCCTTGTCGGCTTCCACTATCTCA +
Preference number: 5 (lower is better)
Translates to: VTVPLVSRSQCGSRG*WFRSSFSLSASTIS
Trigger: TGAGATAGTGGAAGCCGACAAGGAAAAGGAGCTCCGGAACCACCAGCCCCGGGAGCCACACTGTGACCTGGAGACCAGTGGGACTGTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp GTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCCCTTCCACTCGTGGGAGGAGGGCACCACCTGCAAACTaGGAATCCCAGACACCAGCT +
Preference number: 5 (lower is better)
Translates to: VVSCPVASLETPSTRGRRAPPAN*ESQTPA
Trigger: AGCTGGTGTCTGGGATTCCAAGTTTGCAGGTGGTGC...CCTCCTCCCACGAGTGGAAGGGGTTTCCAAGGAAGCCACAGGGCAGCTGACCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp TTGGTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGCCACCCGAGCTGAGTCCCAGGCCTTCATGATGGACTaGAGCACCACCTGCAAACTT +
Preference number: 5 (lower is better)
Translates to: LVRVVVAVPCSATRAESQAFMMD*STTCKL
Trigger: AAGTTTGCAGGTGGTGCTCAAGTCCATCATGAAGGC...CTGGGACTCAGCTCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGACCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CAA 90 bp CCCGAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGTCCGCATCTGTGCTGTaGGGGAAACAGGCCTTGTGG +
Preference number: 5 (lower is better)
Translates to: PEGRLPRVDDKTHPLEHTSASVL*GKQALW
Trigger: CCACAAGGCCTGTTTCCCCAACAGCACAGATGCGGA...CGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp GCTTGCCTGAGTGAGCATTCGCTGACACTGGCGGGCTGCACAAGCCACGACTGTAGCCAGTTCCAGGTGTaGCCGGCCGCATCGTTTGTA +
Preference number: 5 (lower is better)
Translates to: ACLSEHSLTLAGCTSHDCSQFQV*PAASFV
Trigger: TACAAACGATGCGGCCGGCAACACCTGGAACTGGCT...ACAGTCGTGGCTTGTGCAGCCCGCCAGTGTCAGCGAATGCTCACTCAGGCAAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp CCACGTGAAGGGTGCTCCCCACAGGACGCAGAGCTCCTCACAACGGCTCCAAGCATGACTTCCTCCGCCTaGAAGATCCACTCCAGGTAC +
Preference number: 5 (lower is better)
Translates to: PREGCSPQDAELLTTAPSMTSSA*KIHSRY
Trigger: GTACCTGGAGTGGATCTTCAAGGCGGAGGAAGTCAT...GCTTGGAGCCGTTGTGAGGAGCTCTGCGTCCTGTGGGGAGCACCCTTCACGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp CTCGTGGGAGGAGGACAGCAAATGGCTGCCTTGTTTGCCACCATGACATCCAGTTCTGTCTTCCCGCTCTaGAGGCTGGCGCGGGCGAAG +
Preference number: 5 (lower is better)
Translates to: LVGGGQQMAALFATMTSSSVFPL*RLARAK
Trigger: CTTCGCCCGCGCCAGCCTCAAGAGCGGGAAGACAGA...ACTGGATGTCATGGTGGCAAACAAGGCAGCCATTTGCTGTCCTCCTCCCACGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp GCGGTCACGGTGCAGCTAGCACCAGTGGTCTTGGTCAGGGTGGTGGTAGCTGTGGGGAAGGTGTCGAAGTaGGTTGTGGGAGTCTCATCC +
Preference number: 5 (lower is better)
Translates to: AVTVQLAPVVLVRVVVAVGKVSK*VVGVSS
Trigger: GGATGAGACTCCCACAACCAACTTCGACACCTTCCC...CACAGCTACCACCACCCTGACCAAGACCACTGGTGCTAGCTGCACCGTGACCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CAA 90 bp GTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCCCTTCCACTCGTGGGAGGAGGGGGAAGGTGTCGAAGTaGGTTGTGGGAGTCTCATCC +
Preference number: 5 (lower is better)
Translates to: VVSCPVASLETPSTRGRRGKVSK*VVGVSS
Trigger: GGATGAGACTCCCACAACCAACTTCGACACCTTCCC...CCTCCTCCCACGAGTGGAAGGGGTTTCCAAGGAAGCCACAGGGCAGCTGACCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp TCGGCCACCCGAGCTGAGTCCCAGGGTGCAGTGGTAACCGTTGGGCACGCGGCGCACTTCTTTGGCCTTTaGCAGAGCAAGCTTCTGATT +
Preference number: 5 (lower is better)
Translates to: SATRAESQGAVVTVGHAAHFFGL*QSKLLI
Trigger: AATCAGAAGCTTGCTCTGCAAAAGGCCAAAGAAGTG...CGCCGCGTGCCCAACGGTTACCACTGCACCCTGGGACTCAGCTCGGGTGGCCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CAA 90 bp GCACCAGTGGTCTTGGTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGCCACCCGAACTTCAGCCACTTCTTaGGCCTTTTGCAGAGCAAGC +
Preference number: 5 (lower is better)
Translates to: APVVLVRVVVAVPCSATRTSATS*AFCRAS
Trigger: GCTTGCTCTGCAAAAGGCCAAAGAAGTGGCTGAAGT...TCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGACCAAGACCACTGGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CAA 90 bp GCTGAGTCCCAGGGTGCAGTGGTAACCGTTGGGCACGCGGCGGAGAGGGTGAGAACTTCAGCCACTTCTTaGGCCTTTTGCAGAGCAAGC +
Preference number: 5 (lower is better)
Translates to: AESQGAVVTVGHAAERVRTSATS*AFCRAS
Trigger: GCTTGCTCTGCAAAAGGCCAAAGAAGTGGCTGAAGT...TCTCACCCTCTCCGCCGCGTGCCCAACGGTTACCACTGCACCCTGGGACTCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CAA 90 bp GGGGTAGAAGCCAAGAATCCAACACAGATCATCTGGAATTTCAGAACACGGAGGCCCGCCGCGGGGGTCTaGTCCTTGTCGCGGTGCCGG +
Preference number: 5 (lower is better)
Translates to: GVEAKNPTQIIWNFRTRRPAAGV*SLSRCR
Trigger: CCGGCACCGCGACAAGGACAAGACCCCCGCGGCGGG...CCTCCGTGTTCTGAAATTCCAGATGATCTGTGTTGGATTCTTGGCTTCTACCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp CCTGCTGCATGCAGGCGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTCTTCTTCTTCCCCTCTGCTaGGCTTTCCAGGTCCACGTT +
Preference number: 5 (lower is better)
Translates to: PAACRRLSGHGAASTSGLLLPLC*AFQVHV
Trigger: AACGTGGACCTGGAAAGCCAAGCAGAGGGGAAGAAG...AAGACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACGCCTGCATGCAGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CAA 90 bp ACGCCTGCTGCATGCAGGCGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTAGGTATTTCAGAGCGTaGTTCCTGGGCGAGTCTGTG +
Preference number: 5 (lower is better)
Translates to: TPAACRRLSGHGAASTSGRYFRA*FLGESV
Trigger: CACAGACTCGCCCAGGAACAACGCTCTGAAATACCT...ACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACGCCTGCATGCAGCAGGCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CAA 90 bp GCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGAGCCGTTTGATGGTCTaGAGGGGCCGCAGGACACGA +
Preference number: 5 (lower is better)
Translates to: AGCPVWMIKLIHWNTRLLSRLMV*RGRRTR
Trigger: TCGTGTCCTGCGGCCCCTCAAGACCATCAAACGGCT...CAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp GTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCCCTTCCACTCGTGGGAGGAGGAACACAGCCTTGAGCTaGGGCAGCCGTTTGATGGTC +
Preference number: 5 (lower is better)
Translates to: VVSCPVASLETPSTRGRRNTALS*GSRLMV
Trigger: GACCATCAAACGGCTGCCCAAGCTCAAGGCTGTGTT...CCTCCTCCCACGAGTGGAAGGGGTTTCCAAGGAAGCCACAGGGCAGCTGACCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp CGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGCATGCAGGCGTCCAGCTGGGGCCAGCTaGATCTCCAGTGCCGTCCGG +
Preference number: 5 (lower is better)
Translates to: RVDDKTHPLEHTPAACRRPAGAS*ISSAVR
Trigger: CCGGACGGCACTGGAGATCAAGCTGGCCCCAGCTGG...ACGCCTGCATGCAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp ACGCCTGCTGCATGCAGGCGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTTTTGATGCCACTCTCTaGGTTTTGTATGGCCCCGCC +
Preference number: 5 (lower is better)
Translates to: TPAACRRLSGHGAASTSGFDATL*VLYGPA
Trigger: GGCGGGGCCATACAAAACCAAGAGAGTGGCATCAAA...ACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACGCCTGCATGCAGCAGGCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CAA 90 bp CGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGCATGCAGGCGTGCTCCTGGCCAGCTGTaGGCGACGTTGGGTGGCTGC +
Preference number: 5 (lower is better)
Translates to: RVDDKTHPLEHTPAACRRAPGQL*ATLGGC
Trigger: GCAGCCACCCAACGTCGCCAACAGCTGGCCAGGAGC...ACGCCTGCATGCAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp CCCGAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCTAGCACCAGTGGTCTaGGTCAGGGTGGTGGTAGCT +
Preference number: 5 (lower is better)
Translates to: PEGRLPRVDDKTHPLEHTLAPVV*VRVVVA
Trigger: AGCTACCACCACCCTGACCAAGACCACTGGTGCTAG...CGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp CCACGTGAAGGGTGCTCCCCACAGGACGCAGAGCTCCTCACAACGGCTCCAAGCCAGCAAATGGCTGCCTaGTTTGCCACCATGACATCC +
Preference number: 5 (lower is better)
Translates to: PREGCSPQDAELLTTAPSQQMAA*FATMTS
Trigger: GGATGTCATGGTGGCAAACAAGGCAGCCATTTGCTG...GCTTGGAGCCGTTGTGAGGAGCTCTGCGTCCTGTGGGGAGCACCCTTCACGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp GCCCGGCCTCAGTGGCAGGAGCCGTGTCCTCCCTCGGTCACTTGCTCTGAGTTTCCTTCCTACCAGCCTTaGCCTCTCTTCTGCTGTATG +
Preference number: 5 (lower is better)
Translates to: ARPQWQEPCPPSVTCSEFPSYQP*PLFCCM
Trigger: CATACAGCAGAAGAGAGGCAAAGGCTGGTAGGAAGG...AAACTCAGAGCAAGTGACCGAGGGAGGACACGGCTCCTGCCACTGAGGCCGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp TGGCGCCAGGACAGTGCTGGGCATCAGGTGCCCGGCCTCAGTGGCAGGAGCCGTGACCAGGCAGCGGTCTaGTGTGTTTTACTTCTATTA +
Preference number: 5 (lower is better)
Translates to: WRQDSAGHQVPGLSGRSRDQAAV*CVLLLL
Trigger: TAATAGAAGTAAAACACACAAGACCGCTGCCTGGTC...ACGGCTCCTGCCACTGAGGCCGGGCACCTGATGCCCAGCACTGTCCTGGCGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS GCA 90 bp CTGCAAACCGGTCCTCTCCCTCCTCTGCGTGGATCAGGTCATTTCTaGTCTTCTTGGTGGCCGCTCTCTTCAGCACTGCGTCCAAAGGGG +
Preference number: 5 (lower is better)
Translates to: LQTGPLPPLRGSGHF*SSWWPLSSALRPKG
Trigger: CCCCTTTGGACGCAGTGCTGAAGAGAGCGGCCACCAAGAAGAGCAGAAATGACCTGATCCACGCAGAGGAGGGAGAGGACCGGTTTGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371355.8
ENST00000371357.5
CDS CCA 90 bp TGTCTGCATCCTCTGGCTGTTCCTCCACCTTCTGGAGACAGGTGCTaGGCAGTGTGTGCATGGGACCCACAGTCACAGTCCCACTGGTCT +
Preference number: 5 (lower is better)
Translates to: CLHPLAVPPPSGDRC*AVCAWDPQSQSHWS
Trigger: AGACCAGTGGGACTGTGACTGTGGGTCCCATGCACACACTGCCCAGCACCTGTCTCCAGAAGGTGGAGGAACAGCCAGAGGATGCAGACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS CCA 90 bp ACTGGGAACGACCGTGGCTTCCCCAAGAGGGCCCGTCAGCATCACTaGGATATGTACAATAGTGTTCGGGTCTGGGGGCTGACTGCCCAT +
Preference number: 5 (lower is better)
Translates to: TGNDRGFPKRARQHH*DMYNSVRVWGLTAH
Trigger: ATGGGCAGTCAGCCCCCAGACCCGAACACTATTGTACATATCCCAGTGATGCTGACGGGCCCTCTTGGGGAAGCCACGGTCGTTCCCAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS CCA 90 bp CTCCTCATCACGTCATCCGCTTCCACCTCCTTCTTCCCCTCTGCTTaGCTTTCCAGGTCCACGTTACCACTGGGAACGACCGTGGCTTCC +
Preference number: 5 (lower is better)
Translates to: LLITSSASTSFFPSA*LSRSTLPLGTTVAS
Trigger: GGAAGCCACGGTCGTTCCCAGTGGTAACGTGGACCTGGAAAGCCAAGCAGAGGGGAAGAAGGAGGTGGAAGCGGATGACGTGATGAGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp GCTTGCCTGAGTGAGCATTCGCTGACACTGGCGGGCTGCACAAGCCACGACTGTGCACCACCTGCAAACTaGGAATCCCAGACACCAGCT +
Preference number: 5 (lower is better)
Translates to: ACLSEHSLTLAGCTSHDCAPPAN*ESQTPA
Trigger: AGCTGGTGTCTGGGATTCCAAGTTTGCAGGTGGTGC...ACAGTCGTGGCTTGTGCAGCCCGCCAGTGTCAGCGAATGCTCACTCAGGCAAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp CGGTTTAGGGTCTGGTGTGTGGTACGAGACCCAGGAAGGCAGGACAGGAAGGGGTTGGTGATGCCAAAGTaGGGTCCTGGCCAGTACTCC +
Preference number: 5 (lower is better)
Translates to: RFRVWCVVRDPGRQDRKGLVMPK*GPGQYS
Trigger: GGAGTACTGGCCAGGACCCAACTTTGGCATCACCAA...CCCCTTCCTGTCCTGCCTTCCTGGGTCTCGTACCACACACCAGACCCTAAACCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp GAAAATGCCTCACACAAGCACGTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCACCCTCTCTCGCTCCTaGGCAAACTCCCCCGAGAGC +
Preference number: 5 (lower is better)
Translates to: ENASHKHVVSCPVASLETTLSRS*ANSPES
Trigger: GCTCTCGGGGGAGTTTGCCAAGGAGCGAGAGAGGGT...GGTTTCCAAGGAAGCCACAGGGCAGCTGACCACGTGCTTGTGTGAGGCATTTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp CGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTCTTGGTCAGGGTGGTGGTATGACTTCCTCCGCCTaGAAGATCCACTCCAGGTAC +
Preference number: 5 (lower is better)
Translates to: RLSGHGAASTSGLGQGGGMTSSA*KIHSRY
Trigger: GTACCTGGAGTGGATCTTCAAGGCGGAGGAAGTCAT...ACCACCACCCTGACCAAGACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CAA 90 bp GTGCAGCTAGCACCAGTGGTCTTGGTCAGGGTGGTGGTAGCTGTGCCGTGCTCGTCATTTCTGCTCTTCTaGGTGGCCGCTCTCTTCAGC +
Preference number: 5 (lower is better)
Translates to: VQLAPVVLVRVVVAVPCSSFLLF*VAALFS
Trigger: GCTGAAGAGAGCGGCCACCAAGAAGAGCAGAAATGA...CGAGCACGGCACAGCTACCACCACCCTGACCAAGACCACTGGTGCTAGCTGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CAA 90 bp TCTTCACCAAACAAGGGACCTCCCAGCATCTTGTGCACCTTGGACAGTGTCCTGTCTGTCTTCCCGCTCTaGAGGCTGGCGCGGGCGAAG +
Preference number: 5 (lower is better)
Translates to: SSPNKGPPSILCTLDSVLSVFPL*RLARAK
Trigger: CTTCGCCCGCGCCAGCCTCAAGAGCGGGAAGACAGA...CAGGACACTGTCCAAGGTGCACAAGATGCTGGGAGGTCCCTTGTTTGGTGAAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp CCCGAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGTTTGCTGACGCCGCCTaGCGATTCGATCCCGTGATA +
Preference number: 5 (lower is better)
Translates to: PEGRLPRVDDKTHPLEHTFADAA*RFDPVI
Trigger: TATCACGGGATCGAATCGCAAGGCGGCGTCAGCAAA...CGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp GAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGACGAGAACATGCCTTaGCTGACGCCGCCTTGCGAT +
Preference number: 5 (lower is better)
Translates to: EGRLPRVDDKTHPLEHTPDENMP*LTPPCD
Trigger: ATCGCAAGGCGGCGTCAGCAAAGGCATGTTCTCGTC...AGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp GCCCGGCCTCAGTGGCAGGAGCCGTGTCCTCCCTCGGTCACTTGCTCTGAGTTTACTTCAGCCACTTCTTaGGCCTTTTGCAGAGCAAGC +
Preference number: 5 (lower is better)
Translates to: ARPQWQEPCPPSVTCSEFTSATS*AFCRAS
Trigger: GCTTGCTCTGCAAAAGGCCAAAGAAGTGGCTGAAGT...AAACTCAGAGCAAGTGACCGAGGGAGGACACGGCTCCTGCCACTGAGGCCGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp TGGCGCCAGGACAGTGCTGGGCATCAGGTGCCCGGCCTCAGTGGCAGGAGCCGTTTGATGTCTTTCCCTTaGGATCCTGAGAAAGCAAAC +
Preference number: 5 (lower is better)
Translates to: WRQDSAGHQVPGLSGRSRLMSFP*DPEKAN
Trigger: GTTTGCTTTCTCAGGATCCAAAGGGAAAGACATCAA...ACGGCTCCTGCCACTGAGGCCGGGCACCTGATGCCCAGCACTGTCCTGGCGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp CTCGTGGGAGGAGGACAGCAAATGGCTGCCTTGTTTGCCACCATGACATCCAGTAGCTTGGGCAGCCGTTaGATGGTCTTGAGGGGCCGC +
Preference number: 5 (lower is better)
Translates to: LVGGGQQMAALFATMTSSSLGSR*MVLRGR
Trigger: GCGGCCCCTCAAGACCATCAAACGGCTGCCCAAGCT...ACTGGATGTCATGGTGGCAAACAAGGCAGCCATTTGCTGTCCTCCTCCCACGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp CCCGAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGAACACAGCCTTGAGCTaGGGCAGCCGTTTGATGGTC +
Preference number: 5 (lower is better)
Translates to: PEGRLPRVDDKTHPLEHTNTALS*GSRLMV
Trigger: GACCATCAAACGGCTGCCCAAGCTCAAGGCTGTGTT...CGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp AGACTGAAAATGCCTCACACAAGCACGTGGTCAGCTGCCCTGTGGCTTCCTTGGTGCGGTACCCAGGGCTaGGACCCTGCTCCTCATAGG +
Preference number: 5 (lower is better)
Translates to: RLKMPHTSTWSAALWLPWCGTQG*DPAPHR
Trigger: CCTATGAGGAGCAGGGTCCAAGCCCTGGGTACCGCA...CCAAGGAAGCCACAGGGCAGCTGACCACGTGCTTGTGTGAGGCATTTTCAGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp GAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGAACGACTGCCGGTTTaGGGGCATGTACCGTGTCAG +
Preference number: 5 (lower is better)
Translates to: EGRLPRVDDKTHPLEHTPERLPV*GHVPCQ
Trigger: CTGACACGGTACATGCCCCAAAACCGGCAGTCGTTC...AGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp GCTTGCCTGAGTGAGCATTCGCTGACACTGGCGGGCTGCACAAGCCACGACTGTAACGTCCGGAAGTTGTaGTGGCGGTTGATGCTGGTG +
Preference number: 5 (lower is better)
Translates to: ACLSEHSLTLAGCTSHDCNVRKL*WRLMLV
Trigger: CACCAGCATCAACCGCCACAACAACTTCCGGACGTT...ACAGTCGTGGCTTGTGCAGCCCGCCAGTGTCAGCGAATGCTCACTCAGGCAAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp CCTGCTGCATGCAGGCGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTCTTCAGCAGCATCAGGGCTaGCAAAAACGTCCGGAAGTT +
Preference number: 5 (lower is better)
Translates to: PAACRRLSGHGAASTSGLQQHQG*QKRPEV
Trigger: AACTTCCGGACGTTTTTGCAAGCCCTGATGCTGCTG...AAGACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACGCCTGCATGCAGCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CAA 90 bp GCTGCATGCAGGCGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTCTTGGTTTTGATGCCACTCTCTaGGTTTTGTATGGCCCCGCC +
Preference number: 5 (lower is better)
Translates to: AACRRLSGHGAASTSGLGFDATL*VLYGPA
Trigger: GGCGGGGCCATACAAAACCAAGAGAGTGGCATCAAA...ACCAAGACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACGCCTGCATGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CAA 90 bp TTGGTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGCCACCCGAGCTGAGTCCCAGCAGGAGACAGACTCTTaGATGCCACTCTCTTGGTTT +
Preference number: 5 (lower is better)
Translates to: LVRVVVAVPCSATRAESQQETDS*MPLSWF
Trigger: AAACCAAGAGAGTGGCATCAAAGAGTCTGTCTCCTG...CTGGGACTCAGCTCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGACCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CAA 90 bp GAAAATGCCTCACACAAGCACGTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCCTCTGCAGCAGGGCGTaGTGTTCGGAAAGCCCACGG +
Preference number: 5 (lower is better)
Translates to: ENASHKHVVSCPVASLETLCSRA*CSESPR
Trigger: CCGTGGGCTTTCCGAACACAACGCCCTGCTGCAGAG...GGTTTCCAAGGAAGCCACAGGGCAGCTGACCACGTGCTTGTGTGAGGCATTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp GAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTTGCCCTGTGGCTTCCTaGGAAACCCCTTCCACTCGT +
Preference number: 5 (lower is better)
Translates to: EGRLPRVDDKTHPLEHTPCPVAS*ETPSTR
Trigger: ACGAGTGGAAGGGGTTTCCAAGGAAGCCACAGGGCA...AGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp TCCAGGGAGGACAGAGCTTGCCTGAGTGAGCATTCGCTGACACTGGCGGGCTGCAGCATCTTGTGCACCTaGGACAGTGTCCTGAGCATG +
Preference number: 5 (lower is better)
Translates to: SREDRACLSEHSLTLAGCSILCT*DSVLSM
Trigger: CATGCTCAGGACACTGTCCAAGGTGCACAAGATGCT...GCAGCCCGCCAGTGTCAGCGAATGCTCACTCAGGCAAGCTCTGTCCTCCCTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp GAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGGACCTCCCAGCATCTaGTGCACCTTGGACAGTGTC +
Preference number: 5 (lower is better)
Translates to: EGRLPRVDDKTHPLEHTPGPPSI*CTLDSV
Trigger: GACACTGTCCAAGGTGCACAAGATGCTGGGAGGTCC...AGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp CCCCTCCGTCCCGAGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCACACATCCTTCTACTTaGCAACAGGAGCACAGTGAT +
Preference number: 5 (lower is better)
Translates to: PLRPEVSAHFQVGPASLCTHPST*QQEHSD
Trigger: ATCACTGTGCTCCTGTTGCAAAGTAGAAGGATGTGT...GCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCTCGGGACGGAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp AGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGTTTAAGTAGGTCCCAGTaGTGTTGCATGGTTGGGACT +
Preference number: 5 (lower is better)
Translates to: RSRRTFRWALLLCAARPRLSRSQ*CCMVGT
Trigger: AGTCCCAACCATGCAACACAACTGGGACCTACTTAA...ACGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS GCA 90 bp CTGCAAACCGGTCCTCTCCCTCCTCTGCGTGGATCAGGTCATTTCTaGTCTTCTTGGTGGCCGCTCTCTTCAGCACGTCCAAAGGGGACT +
Preference number: 5 (lower is better)
Translates to: LQTGPLPPLRGSGHF*SSWWPLSSARPKGT
Trigger: AGTCCCCTTTGGACGTGCTGAAGAGAGCGGCCACCAAGAAGAGCAGAAATGACCTGATCCACGCAGAGGAGGGAGAGGACCGGTTTGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371363.5
ENST00000371372.6
CDS CCA 90 bp AGGGCCCGTCAGCATCACTGGGATATGTACAATAGTGTTCGGGTCTaGGGGCTGACTGCCCATGCGAGTGACGTTCCGCTGATTGTCTGC +
Preference number: 5 (lower is better)
Translates to: RARQHHWDMYNSVRV*GLTAHASDVPLIVC
Trigger: GCAGACAATCAGCGGAACGTCACTCGCATGGGCAGTCAGCCCCCAGACCCGAACACTATTGTACATATCCCAGTGATGCTGACGGGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS CCA 90 bp CCTCTCCCTCCTCTGCGTGGATCAGGTCATTTCTGCTCTTCTTGGTaGCCGCTCTCTTCAGCACTGCGTCCAAAGGGGACTTCTCCTCTG +
Preference number: 5 (lower is better)
Translates to: PLPPLRGSGHFCSSW*PLSSALRPKGTSPL
Trigger: CAGAGGAGAAGTCCCCTTTGGACGCAGTGCTGAAGAGAGCGGCCACCAAGAAGAGCAGAAATGACCTGATCCACGCAGAGGAGGGAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371355.8
ENST00000371357.5
CDS-3UTR CAA 90 bp GAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCACCACCTGCAAACTaGGAATCCCAGACACCAGCT +
Preference number: 5 (lower is better)
Translates to: EGRLPRVDDKTHPLEHTPAPPAN*ESQTPA
Trigger: AGCTGGTGTCTGGGATTCCAAGTTTGCAGGTGGTGC...AGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp GAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTTTGGTGATGCCAAAGTaGGGTCCTGGCCAGTACTCC +
Preference number: 5 (lower is better)
Translates to: EGRLPRVDDKTHPLEHTPLVMPK*GPGQYS
Trigger: GGAGTACTGGCCAGGACCCAACTTTGGCATCACCAA...AGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp GCTAGGCTGTGTGGGTTTAGAAAAGTGGATTCTCGACCCAACACTGCCTGGGGAACCCTCTCTCGCTCCTaGGCAAACTCCCCCGAGAGC +
Preference number: 5 (lower is better)
Translates to: ARLCGFRKVDSRPNTAWGTLSRS*ANSPES
Trigger: GCTCTCGGGGGAGTTTGCCAAGGAGCGAGAGAGGGT...TCCCCAGGCAGTGTTGGGTCGAGAATCCACTTTTCTAAACCCACACAGCCTAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp CTCGTGGGAGGAGGACAGCAAATGGCTGCCTTGTTTGCCACCATGACATCCAGTCACTCCAGGTACCCGTaGAGCTCTCGCTCGATCTGC +
Preference number: 5 (lower is better)
Translates to: LVGGGQQMAALFATMTSSHSRYP*SSRSIC
Trigger: GCAGATCGAGCGAGAGCTCAACGGGTACCTGGAGTG...ACTGGATGTCATGGTGGCAAACAAGGCAGCCATTTGCTGTCCTCCTCCCACGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp CGGTTTAGGGTCTGGTGTGTGGTACGAGACCCAGGAAGGCAGGACAGGAAGGGGTCATTTCTGCTCTTCTaGGTGGCCGCTCTCTTCAGC +
Preference number: 5 (lower is better)
Translates to: RFRVWCVVRDPGRQDRKGSFLLF*VAALFS
Trigger: GCTGAAGAGAGCGGCCACCAAGAAGAGCAGAAATGA...CCCCTTCCTGTCCTGCCTTCCTGGGTCTCGTACCACACACCAGACCCTAAACCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp GCTTGCCTGAGTGAGCATTCGCTGACACTGGCGGGCTGCACAAGCCACGACTGTTCATTTCTGCTCTTCTaGGTGGCCGCTCTCTTCAGC +
Preference number: 5 (lower is better)
Translates to: ACLSEHSLTLAGCTSHDCSFLLF*VAALFS
Trigger: GCTGAAGAGAGCGGCCACCAAGAAGAGCAGAAATGA...ACAGTCGTGGCTTGTGCAGCCCGCCAGTGTCAGCGAATGCTCACTCAGGCAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp GCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGTTTGCTGACGCCGCCTaGCGATTCGATCCCGTGATA +
Preference number: 5 (lower is better)
Translates to: AGCPVWMIKLIHWNTRLLFADAA*RFDPVI
Trigger: TATCACGGGATCGAATCGCAAGGCGGCGTCAGCAAA...CAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp GCACCAGTGGTCTTGGTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGCCACCCGACACTTCTTTGGCCTTTaGCAGAGCAAGCTTCTGATT +
Preference number: 5 (lower is better)
Translates to: APVVLVRVVVAVPCSATRHFFGL*QSKLLI
Trigger: AATCAGAAGCTTGCTCTGCAAAAGGCCAAAGAAGTG...TCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGACCAAGACCACTGGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CAA 90 bp GAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTCTTCTTCCCCTCTGCTaGGCTTTCCAGGTCCACGTT +
Preference number: 5 (lower is better)
Translates to: EGRLPRVDDKTHPLEHTPLLPLC*AFQVHV
Trigger: AACGTGGACCTGGAAAGCCAAGCAGAGGGGAAGAAG...AGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp CGGTTTAGGGTCTGGTGTGTGGTACGAGACCCAGGAAGGCAGGACAGGAAGGGGAGGTATTTCAGAGCGTaGTTCCTGGGCGAGTCTGTG +
Preference number: 5 (lower is better)
Translates to: RFRVWCVVRDPGRQDRKGRYFRA*FLGESV
Trigger: CACAGACTCGCCCAGGAACAACGCTCTGAAATACCT...CCCCTTCCTGTCCTGCCTTCCTGGGTCTCGTACCACACACCAGACCCTAAACCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp TCTTCACCAAACAAGGGACCTCCCAGCATCTTGTGCACCTTGGACAGTGTCCTGAGCTTGGGCAGCCGTTaGATGGTCTTGAGGGGCCGC +
Preference number: 5 (lower is better)
Translates to: SSPNKGPPSILCTLDSVLSLGSR*MVLRGR
Trigger: GCGGCCCCTCAAGACCATCAAACGGCTGCCCAAGCT...CAGGACACTGTCCAAGGTGCACAAGATGCTGGGAGGTCCCTTGTTTGGTGAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp GCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGCAGTCAAACACAGCCTaGAGCTTGGGCAGCCGTTTG +
Preference number: 5 (lower is better)
Translates to: AGCPVWMIKLIHWNTRLLQSNTA*SLGSRL
Trigger: CAAACGGCTGCCCAAGCTCAAGGCTGTGTTTGACTG...CAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp GCTAGGCTGTGTGGGTTTAGAAAAGTGGATTCTCGACCCAACACTGCCTGGGGATGCGGTACCCAGGGCTaGGACCCTGCTCCTCATAGG +
Preference number: 5 (lower is better)
Translates to: ARLCGFRKVDSRPNTAWGCGTQG*DPAPHR
Trigger: CCTATGAGGAGCAGGGTCCAAGCCCTGGGTACCGCA...TCCCCAGGCAGTGTTGGGTCGAGAATCCACTTTTCTAAACCCACACAGCCTAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp CGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTCTTGGTCAGGGTGGTGGTAAAAACGTCCGGAAGTaGTTGTGGCGGTTGATGCTG +
Preference number: 5 (lower is better)
Translates to: RLSGHGAASTSGLGQGGGKNVRK*LWRLML
Trigger: CAGCATCAACCGCCACAACAACTTCCGGACGTTTTT...ACCACCACCCTGACCAAGACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CAA 90 bp GTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCCCTTCCACTCGTGGGAGGAGGAAAAACGTCCGGAAGTaGTTGTGGCGGTTGATGCTG +
Preference number: 5 (lower is better)
Translates to: VVSCPVASLETPSTRGRRKNVRK*LWRLML
Trigger: CAGCATCAACCGCCACAACAACTTCCGGACGTTTTT...CCTCCTCCCACGAGTGGAAGGGGTTTCCAAGGAAGCCACAGGGCAGCTGACCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp GCTTGCCTGAGTGAGCATTCGCTGACACTGGCGGGCTGCACAAGCCACGACTGTCAGCAGCATCAGGGCTaGCAAAAACGTCCGGAAGTT +
Preference number: 5 (lower is better)
Translates to: ACLSEHSLTLAGCTSHDCQQHQG*QKRPEV
Trigger: AACTTCCGGACGTTTTTGCAAGCCCTGATGCTGCTG...ACAGTCGTGGCTTGTGCAGCCCGCCAGTGTCAGCGAATGCTCACTCAGGCAAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp TCTTCACCAAACAAGGGACCTCCCAGCATCTTGTGCACCTTGGACAGTGTCCTGCCACACTCGGTGGCATaGGCCTGCTCATCACAGGCC +
Preference number: 5 (lower is better)
Translates to: SSPNKGPPSILCTLDSVLPHSVA*ACSSQA
Trigger: GGCCTGTGATGAGCAGGCCAATGCCACCGAGTGTGG...CAGGACACTGTCCAAGGTGCACAAGATGCTGGGAGGTCCCTTGTTTGGTGAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp GAAAATGCCTCACACAAGCACGTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCTGTATGGCCCCGCCATaGCTGAGGGAGGTGGAACTC +
Preference number: 5 (lower is better)
Translates to: ENASHKHVVSCPVASLETCMAPP*LREVEL
Trigger: GAGTTCCACCTCCCTCAGCAATGGCGGGGCCATACA...GGTTTCCAAGGAAGCCACAGGGCAGCTGACCACGTGCTTGTGTGAGGCATTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp TCTTCACCAAACAAGGGACCTCCCAGCATCTTGTGCACCTTGGACAGTGTCCTGGCCCCACAGCACTGCTaGGTGCGCCATCCATATCGG +
Preference number: 5 (lower is better)
Translates to: SSPNKGPPSILCTLDSVLAPQHC*VRHPYR
Trigger: CCGATATGGATGGCGCACCAAGCAGTGCTGTGGGGC...CAGGACACTGTCCAAGGTGCACAAGATGCTGGGAGGTCCCTTGTTTGGTGAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp GGGGTAGAAGCCAAGAATCCAACACAGATCATCTGGAATTTCAGAACACGGAGGGAGGAGCGGCCCGAGTaGGTGGCCACAGCCTCCTCG +
Preference number: 5 (lower is better)
Translates to: GVEAKNPTQIIWNFRTRREERPE*VATASS
Trigger: CGAGGAGGCTGTGGCCACCAACTCGGGCCGCTCCTC...CCTCCGTGTTCTGAAATTCCAGATGATCTGTGTTGGATTCTTGGCTTCTACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp AGACTGAAAATGCCTCACACAAGCACGTGGTCAGCTGCCCTGTGGCTTCCTTGGCCCAGGACACGGGATTaGGACTCCTGGGTCCTTCTC +
Preference number: 5 (lower is better)
Translates to: RLKMPHTSTWSAALWLPWPRTRD*DSWVLL
Trigger: GAGAAGGACCCAGGAGTCCAAATCCCGTGTCCTGGG...CCAAGGAAGCCACAGGGCAGCTGACCACGTGCTTGTGTGAGGCATTTTCAGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp CGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGCATGCAGGCGTCTGGCGGTCAGGCACTaGGTCAAGAGCAGCAGAGCC +
Preference number: 5 (lower is better)
Translates to: RVDDKTHPLEHTPAACRRLAVRH*VKSSRA
Trigger: GGCTCTGCTGCTCTTGACCAAGTGCCTGACCGCCAG...ACGCCTGCATGCAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp GCTAGGCTGTGTGGGTTTAGAAAAGTGGATTCTCGACCCAACACTGCCTGGGGATCCACTGGCAAGGGCTaGCTACCTGGCTGCCATCGC +
Preference number: 5 (lower is better)
Translates to: ARLCGFRKVDSRPNTAWGSTGKG*LPGCHR
Trigger: GCGATGGCAGCCAGGTAGCAAGCCCTTGCCAGTGGA...TCCCCAGGCAGTGTTGGGTCGAGAATCCACTTTTCTAAACCCACACAGCCTAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp GAAAATGCCTCACACAAGCACGTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCGGGGTCAGACCTCACTaGACTGCCTGCTCCCTGTGT +
Preference number: 5 (lower is better)
Translates to: ENASHKHVVSCPVASLETGVRPH*TACSLC
Trigger: ACACAGGGAGCAGGCAGTCAAGTGAGGTCTGACCCC...GGTTTCCAAGGAAGCCACAGGGCAGCTGACCACGTGCTTGTGTGAGGCATTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp CTCGTGGGAGGAGGACAGCAAATGGCTGCCTTGTTTGCCACCATGACATCCAGTGGGGTCAGACCTCACTaGACTGCCTGCTCCCTGTGT +
Preference number: 5 (lower is better)
Translates to: LVGGGQQMAALFATMTSSGVRPH*TACSLC
Trigger: ACACAGGGAGCAGGCAGTCAAGTGAGGTCTGACCCC...ACTGGATGTCATGGTGGCAAACAAGGCAGCCATTTGCTGTCCTCCTCCCACGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS TCA 90 bp TCTGCTGCCTGGCGGCGATGGAGATGTTCGCGGCAGACATGGGGCTaGCTTCAGCCACTTCTTTGGCCTTTTGCAGAGCAAGCTTCTGAT +
Preference number: 5 (lower is better)
Translates to: SAAWRRWRCSRQTWG*LQPLLWPFAEQASD
Trigger: ATCAGAAGCTTGCTCTGCAAAAGGCCAAAGAAGTGGCTGAAGTCAGCCCCATGTCTGCCGCGAACATCTCCATCGCCGCCAGGCAGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS CCA 90 bp CCAACAGCACAGAGATCTGCAAACCGGTCCTCTCCCTCCTCTGCGTaGATCAGGTCATTTCTGCTCTTCTTGGTGGCCGCTCTCTTCAGC +
Preference number: 5 (lower is better)
Translates to: PTAQRSANRSSPSSA*IRSFLLFLVAALFS
Trigger: GCTGAAGAGAGCGGCCACCAAGAAGAGCAGAAATGACCTGATCCACGCAGAGGAGGGAGAGGACCGGTTTGCAGATCTCTGTGCTGTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp CCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGCATGCAGGCAGCCAGTTCCAGGTGTaGCCGGCCGCATCGTTTGTA +
Preference number: 5 (lower is better)
Translates to: PVWMIKLIHWNTRLLHAGSQFQV*PAASFV
Trigger: TACAAACGATGCGGCCGGCAACACCTGGAACTGGCT...GCCTGCATGCAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp GGATTCTCGACCCAACACTGCCTGGGGAAATGGCTGTGGTTCTGCATGGAATGGAGCCAGTTCCAGGTGTaGCCGGCCGCATCGTTTGTA +
Preference number: 5 (lower is better)
Translates to: GFSTQHCLGKWLWFCMEWSQFQV*PAASFV
Trigger: TACAAACGATGCGGCCGGCAACACCTGGAACTGGCT...CCATTCCATGCAGAACCACAGCCATTTCCCCAGGCAGTGTTGGGTCGAGAATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp GCTAGGCTGTGTGGGTTTAGAAAAGTGGATTCTCGACCCAACACTGCCTGGGGACACTCCAGGTACCCGTaGAGCTCTCGCTCGATCTGC +
Preference number: 5 (lower is better)
Translates to: ARLCGFRKVDSRPNTAWGHSRYP*SSRSIC
Trigger: GCAGATCGAGCGAGAGCTCAACGGGTACCTGGAGTG...TCCCCAGGCAGTGTTGGGTCGAGAATCCACTTTTCTAAACCCACACAGCCTAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp GAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTATGACTTCCTCCGCCTaGAAGATCCACTCCAGGTAC +
Preference number: 5 (lower is better)
Translates to: EGRLPRVDDKTHPLEHTPMTSSA*KIHSRY
Trigger: GTACCTGGAGTGGATCTTCAAGGCGGAGGAAGTCAT...AGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp GCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGTCATTTCTGCTCTTCTaGGTGGCCGCTCTCTTCAGC +
Preference number: 5 (lower is better)
Translates to: AGCPVWMIKLIHWNTRLLSFLLF*VAALFS
Trigger: GCTGAAGAGAGCGGCCACCAAGAAGAGCAGAAATGA...CAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp GAAAATGCCTCACACAAGCACGTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCGACGAGAACATGCCTTaGCTGACGCCGCCTTGCGAT +
Preference number: 5 (lower is better)
Translates to: ENASHKHVVSCPVASLETDENMP*LTPPCD
Trigger: ATCGCAAGGCGGCGTCAGCAAAGGCATGTTCTCGTC...GGTTTCCAAGGAAGCCACAGGGCAGCTGACCACGTGCTTGTGTGAGGCATTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp GGGGTAGAAGCCAAGAATCCAACACAGATCATCTGGAATTTCAGAACACGGAGGCACACCGAGCGCGCCTaGGCCGAGTTCTGCTGCCTG +
Preference number: 5 (lower is better)
Translates to: GVEAKNPTQIIWNFRTRRHTERA*AEFCCL
Trigger: CAGGCAGCAGAACTCGGCCAAGGCGCGCTCGGTGTG...CCTCCGTGTTCTGAAATTCCAGATGATCTGTGTTGGATTCTTGGCTTCTACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp GGATTCTCGACCCAACACTGCCTGGGGAAATGGCTGTGGTTCTGCATGGAATGGAAGCGGCGGAGCAGGTaGGTGGGGCTTAAACAGAAC +
Preference number: 5 (lower is better)
Translates to: GFSTQHCLGKWLWFCMEWKRRSR*VGLKQN
Trigger: GTTCTGTTTAAGCCCCACCAACCTGCTCCGCCGCTT...CCATTCCATGCAGAACCACAGCCATTTCCCCAGGCAGTGTTGGGTCGAGAATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp AGACTGAAAATGCCTCACACAAGCACGTGGTCAGCTGCCCTGTGGCTTCCTTGGAAGCGGCGGAGCAGGTaGGTGGGGCTTAAACAGAAC +
Preference number: 5 (lower is better)
Translates to: RLKMPHTSTWSAALWLPWKRRSR*VGLKQN
Trigger: GTTCTGTTTAAGCCCCACCAACCTGCTCCGCCGCTT...CCAAGGAAGCCACAGGGCAGCTGACCACGTGCTTGTGTGAGGCATTTTCAGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp GCACCAGTGGTCTTGGTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGCCACCCGATTGATGTCTTTCCCTTaGGATCCTGAGAAAGCAAAC +
Preference number: 5 (lower is better)
Translates to: APVVLVRVVVAVPCSATRLMSFP*DPEKAN
Trigger: GTTTGCTTTCTCAGGATCCAAAGGGAAAGACATCAA...TCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGACCAAGACCACTGGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CAA 90 bp AGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGTTTGATGTCTTTCCCTTaGGATCCTGAGAAAGCAAAC +
Preference number: 5 (lower is better)
Translates to: RSRRTFRWALLLCAARPRLMSFP*DPEKAN
Trigger: GTTTGCTTTCTCAGGATCCAAAGGGAAAGACATCAA...ACGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp GCACCAGTGGTCTTGGTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGCCACCCGAAGGACTCTCAGAGACTaGATGGTATTGATGTCTTTC +
Preference number: 5 (lower is better)
Translates to: APVVLVRVVVAVPCSATRRTLRD*MVLMSF
Trigger: GAAAGACATCAATACCATCAAGTCTCTGAGAGTCCT...TCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGACCAAGACCACTGGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CAA 90 bp AGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGTAGGACTCTCAGAGACTaGATGGTATTGATGTCTTTC +
Preference number: 5 (lower is better)
Translates to: RSRRTFRWALLLCAARPRRTLRD*MVLMSF
Trigger: GAAAGACATCAATACCATCAAGTCTCTGAGAGTCCT...ACGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp CGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGCATGCAGGCGTAGCCGTTTGATGGTCTaGAGGGGCCGCAGGACACGA +
Preference number: 5 (lower is better)
Translates to: RVDDKTHPLEHTPAACRRSRLMV*RGRRTR
Trigger: TCGTGTCCTGCGGCCCCTCAAGACCATCAAACGGCT...ACGCCTGCATGCAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp AGACTGAAAATGCCTCACACAAGCACGTGGTCAGCTGCCCTGTGGCTTCCTTGGGAACGACTGCCGGTTTaGGGGCATGTACCGTGTCAG +
Preference number: 5 (lower is better)
Translates to: RLKMPHTSTWSAALWLPWERLPV*GHVPCQ
Trigger: CTGACACGGTACATGCCCCAAAACCGGCAGTCGTTC...CCAAGGAAGCCACAGGGCAGCTGACCACGTGCTTGTGTGAGGCATTTTCAGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp GGGGTAGAAGCCAAGAATCCAACACAGATCATCTGGAATTTCAGAACACGGAGGCCAGCTGGGGCCAGCTaGATCTCCAGTGCCGTCCGG +
Preference number: 5 (lower is better)
Translates to: GVEAKNPTQIIWNFRTRRPAGAS*ISSAVR
Trigger: CCGGACGGCACTGGAGATCAAGCTGGCCCCAGCTGG...CCTCCGTGTTCTGAAATTCCAGATGATCTGTGTTGGATTCTTGGCTTCTACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp CCTGCTGCATGCAGGCGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTCTTCAGGAGACAGACTCTTaGATGCCACTCTCTTGGTTT +
Preference number: 5 (lower is better)
Translates to: PAACRRLSGHGAASTSGLQETDS*MPLSWF
Trigger: AAACCAAGAGAGTGGCATCAAAGAGTCTGTCTCCTG...AAGACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACGCCTGCATGCAGCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CAA 90 bp AGACTGAAAATGCCTCACACAAGCACGTGGTCAGCTGCCCTGTGGCTTCCTTGGTGCATCCTGGGTCCTTaGAGTGCCCCAGGAGACAGA +
Preference number: 5 (lower is better)
Translates to: RLKMPHTSTWSAALWLPWCILGP*SAPGDR
Trigger: TCTGTCTCCTGGGGCACTCAAAGGACCCAGGATGCA...CCAAGGAAGCCACAGGGCAGCTGACCACGTGCTTGTGTGAGGCATTTTCAGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp GAAAATGCCTCACACAAGCACGTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCTGCATCCTGGGTCCTTaGAGTGCCCCAGGAGACAGA +
Preference number: 5 (lower is better)
Translates to: ENASHKHVVSCPVASLETCILGP*SAPGDR
Trigger: TCTGTCTCCTGGGGCACTCAAAGGACCCAGGATGCA...GGTTTCCAAGGAAGCCACAGGGCAGCTGACCACGTGCTTGTGTGAGGCATTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp CTCGTGGGAGGAGGACAGCAAATGGCTGCCTTGTTTGCCACCATGACATCCAGTTGCATCCTGGGTCCTTaGAGTGCCCCAGGAGACAGA +
Preference number: 5 (lower is better)
Translates to: LVGGGQQMAALFATMTSSCILGP*SAPGDR
Trigger: TCTGTCTCCTGGGGCACTCAAAGGACCCAGGATGCA...ACTGGATGTCATGGTGGCAAACAAGGCAGCCATTTGCTGTCCTCCTCCCACGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp AGGGAGTCTCCTCGCATAAGCCACAAAGACACGTGGCAAAAAGCTGACATCTTTGCTCCTGGCCAGCTGTaGGCGACGTTGGGTGGCTGC +
Preference number: 5 (lower is better)
Translates to: RESPRISHKDTWQKADIFAPGQL*ATLGGC
Trigger: GCAGCCACCCAACGTCGCCAACAGCTGGCCAGGAGC...AAAGATGTCAGCTTTTTGCCACGTGTCTTTGTGGCTTATGCGAGGAGACTCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp GAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTCAGCAAATGGCTGCCTaGTTTGCCACCATGACATCC +
Preference number: 5 (lower is better)
Translates to: EGRLPRVDDKTHPLEHTPQQMAA*FATMTS
Trigger: GGATGTCATGGTGGCAAACAAGGCAGCCATTTGCTG...AGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp AGACTGAAAATGCCTCACACAAGCACGTGGTCAGCTGCCCTGTGGCTTCCTTGGTGCCCTGTGGCTTCCTaGGAAACCCCTTCCACTCGT +
Preference number: 5 (lower is better)
Translates to: RLKMPHTSTWSAALWLPWCPVAS*ETPSTR
Trigger: ACGAGTGGAAGGGGTTTCCAAGGAAGCCACAGGGCA...CCAAGGAAGCCACAGGGCAGCTGACCACGTGCTTGTGTGAGGCATTTTCAGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp GAAAATGCCTCACACAAGCACGTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCTGCCCTGTGGCTTCCTaGGAAACCCCTTCCACTCGT +
Preference number: 5 (lower is better)
Translates to: ENASHKHVVSCPVASLETCPVAS*ETPSTR
Trigger: ACGAGTGGAAGGGGTTTCCAAGGAAGCCACAGGGCA...GGTTTCCAAGGAAGCCACAGGGCAGCTGACCACGTGCTTGTGTGAGGCATTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp GAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTCCTTCCTACCAGCCTTaGCCTCTCTTCTGCTGTATG +
Preference number: 5 (lower is better)
Translates to: EGRLPRVDDKTHPLEHTPPSYQP*PLFCCM
Trigger: CATACAGCAGAAGAGAGGCAAAGGCTGGTAGGAAGG...AGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp GAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTAGCATCTTGTGCACCTaGGACAGTGTCCTGAGCATG +
Preference number: 5 (lower is better)
Translates to: EGRLPRVDDKTHPLEHTPSILCT*DSVLSM
Trigger: CATGCTCAGGACACTGTCCAAGGTGCACAAGATGCT...AGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp CCCGAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGAACTACAGCCACTGCTaGACTGGTTCCAGATGCAGA +
Preference number: 5 (lower is better)
Translates to: PEGRLPRVDDKTHPLEHTNYSHC*TGSRCR
Trigger: TCTGCATCTGGAACCAGTCAAGCAGTGGCTGTAGTT...CGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTCGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp ACACACACACACACACACACATCACACACAATTTCTTTGAGGAGAATCATGGGGCGGGCTGGGGCCTCCTaGCCACAGGGGAAGTCACCC +
Preference number: 5 (lower is better)
Translates to: THTHTHTSHTISLRRIMGRAGAS*PQGKSP
Trigger: GGGTGACTTCCCCTGTGGCAAGGAGGCCCCAGCCCG...CCCCATGATTCTCCTCAAAGAAATTGTGTGTGATGTGTGTGTGTGTGTGTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp AGACTGAAAATGCCTCACACAAGCACGTGGTCAGCTGCCCTGTGGCTTCCTTGGGGGAAGGTGTCGAAGTaGGTTGTGGGAGTCTCATCC +
Preference number: 5 (lower is better)
Translates to: RLKMPHTSTWSAALWLPWGKVSK*VVGVSS
Trigger: GGATGAGACTCCCACAACCAACTTCGACACCTTCCC...CCAAGGAAGCCACAGGGCAGCTGACCACGTGCTTGTGTGAGGCATTTTCAGTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp CTCGTGGGAGGAGGACAGCAAATGGCTGCCTTGTTTGCCACCATGACATCCAGTTTTGCTGACGCCGCCTaGCGATTCGATCCCGTGATA +
Preference number: 5 (lower is better)
Translates to: LVGGGQQMAALFATMTSSFADAA*RFDPVI
Trigger: TATCACGGGATCGAATCGCAAGGCGGCGTCAGCAAA...ACTGGATGTCATGGTGGCAAACAAGGCAGCCATTTGCTGTCCTCCTCCCACGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp TCTTCACCAAACAAGGGACCTCCCAGCATCTTGTGCACCTTGGACAGTGTCCTGGACGAGAACATGCCTTaGCTGACGCCGCCTTGCGAT +
Preference number: 5 (lower is better)
Translates to: SSPNKGPPSILCTLDSVLDENMP*LTPPCD
Trigger: ATCGCAAGGCGGCGTCAGCAAAGGCATGTTCTCGTC...CAGGACACTGTCCAAGGTGCACAAGATGCTGGGAGGTCCCTTGTTTGGTGAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp GCTAGGCTGTGTGGGTTTAGAAAAGTGGATTCTCGACCCAACACTGCCTGGGGAAAGCGGCGGAGCAGGTaGGTGGGGCTTAAACAGAAC +
Preference number: 5 (lower is better)
Translates to: ARLCGFRKVDSRPNTAWGKRRSR*VGLKQN
Trigger: GTTCTGTTTAAGCCCCACCAACCTGCTCCGCCGCTT...TCCCCAGGCAGTGTTGGGTCGAGAATCCACTTTTCTAAACCCACACAGCCTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp GCCCGGCCTCAGTGGCAGGAGCCGTGTCCTCCCTCGGTCACTTGCTCTGAGTTTTTGATGTCTTTCCCTTaGGATCCTGAGAAAGCAAAC +
Preference number: 5 (lower is better)
Translates to: ARPQWQEPCPPSVTCSEFLMSFP*DPEKAN
Trigger: GTTTGCTTTCTCAGGATCCAAAGGGAAAGACATCAA...AAACTCAGAGCAAGTGACCGAGGGAGGACACGGCTCCTGCCACTGAGGCCGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp GTCTTGGTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGCCACCCGAGCTGAGTCCAGAGACTTGATGGTATaGATGTCTTTCCCTTTGGAT +
Preference number: 5 (lower is better)
Translates to: VLVRVVVAVPCSATRAESRDLMV*MSFPLD
Trigger: ATCCAAAGGGAAAGACATCAATACCATCAAGTCTCT...GGACTCAGCTCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGACCAAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CAA 90 bp TTGGTCAGGGTGGTGGTAGCTGTGCCGTGCTCGGCCACCCGAGCTGAGTCCCAGAGAGACTTGATGGTATaGATGTCTTTCCCTTTGGAT +
Preference number: 5 (lower is better)
Translates to: LVRVVVAVPCSATRAESQRDLMV*MSFPLD
Trigger: ATCCAAAGGGAAAGACATCAATACCATCAAGTCTCT...CTGGGACTCAGCTCGGGTGGCCGAGCACGGCACAGCTACCACCACCCTGACCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CAA 90 bp GGATTCTCGACCCAACACTGCCTGGGGAAATGGCTGTGGTTCTGCATGGAATGGCAGTCAAACACAGCCTaGAGCTTGGGCAGCCGTTTG +
Preference number: 5 (lower is better)
Translates to: GFSTQHCLGKWLWFCMEWQSNTA*SLGSRL
Trigger: CAAACGGCTGCCCAAGCTCAAGGCTGTGTTTGACTG...CCATTCCATGCAGAACCACAGCCATTTCCCCAGGCAGTGTTGGGTCGAGAATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp GAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTAAAAACGTCCGGAAGTaGTTGTGGCGGTTGATGCTG +
Preference number: 5 (lower is better)
Translates to: EGRLPRVDDKTHPLEHTPKNVRK*LWRLML
Trigger: CAGCATCAACCGCCACAACAACTTCCGGACGTTTTT...AGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp GAAAATGCCTCACACAAGCACGTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCGTCTTCTGGGGCAGATaGGCCCACACAACGGAAATC +
Preference number: 5 (lower is better)
Translates to: ENASHKHVVSCPVASLETVFWGR*AHTTEI
Trigger: GATTTCCGTTGTGTGGGCCAATCTGCCCCAGAAGAC...GGTTTCCAAGGAAGCCACAGGGCAGCTGACCACGTGCTTGTGTGAGGCATTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp CGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGCATGCAGGCGTTGCATCCTGGGTCCTTaGAGTGCCCCAGGAGACAGA +
Preference number: 5 (lower is better)
Translates to: RVDDKTHPLEHTPAACRRCILGP*SAPGDR
Trigger: TCTGTCTCCTGGGGCACTCAAAGGACCCAGGATGCA...ACGCCTGCATGCAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp CGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGCATGCAGGCGTCTAGCACCAGTGGTCTaGGTCAGGGTGGTGGTAGCT +
Preference number: 5 (lower is better)
Translates to: RVDDKTHPLEHTPAACRRLAPVV*VRVVVA
Trigger: AGCTACCACCACCCTGACCAAGACCACTGGTGCTAG...ACGCCTGCATGCAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp TCCAGGGAGGACAGAGCTTGCCTGAGTGAGCATTCGCTGACACTGGCGGGCTGCGACCAGGCAGCGGTCTaGTGTGTTTTACTTCTATTA +
Preference number: 5 (lower is better)
Translates to: SREDRACLSEHSLTLAGCDQAAV*CVLLLL
Trigger: TAATAGAAGTAAAACACACAAGACCGCTGCCTGGTC...GCAGCCCGCCAGTGTCAGCGAATGCTCACTCAGGCAAGCTCTGTCCTCCCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp CCACGTGAAGGGTGCTCCCCACAGGACGCAGAGCTCCTCACAACGGCTCCAAGCACATGCACACATAACTaGTTCAAACTACAGCCACTG +
Preference number: 5 (lower is better)
Translates to: PREGCSPQDAELLTTAPSTCTHN*FKLQPL
Trigger: CAGTGGCTGTAGTTTGAACAAGTTATGTGTGCATGT...GCTTGGAGCCGTTGTGAGGAGCTCTGCGTCCTGTGGGGAGCACCCTTCACGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp AGGTCTCGGCGCACTTTCAGGTGGGCCCTGCTTCTCTGTGCCGCACGGCCACGTCTGAGGTTGATGAAATaGTTCGCAATCTCTGTTACT +
Preference number: 5 (lower is better)
Translates to: RSRRTFRWALLLCAARPRLRLMK*FAISVT
Trigger: AGTAACAGAGATTGCGAACAATTTCATCAACCTCAG...ACGTGGCCGTGCGGCACAGAGAAGCAGGGCCCACCTGAAAGTGCGCCGAGACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371357.5
ENST00000371363.5
CDS CCA 90 bp GCTTATGGGGTGGTACCAGCAAGTCCAAAGTCTTCTGGGGCAGATTaGCCCACACAACGGAAATCTCCTTCCTCAACTCCGCGTCACACT +
Preference number: 5 (lower is better)
Translates to: AYGVVPASPKSSGAD*PTQRKSPSSTPRHT
Trigger: AGTGTGACGCGGAGTTGAGGAAGGAGATTTCCGTTGTGTGGGCCAATCTGCCCCAGAAGACTTTGGACTTGCTGGTACCACCCCATAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp CGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGCATGCAGGCGTTTGGTGATGCCAAAGTaGGGTCCTGGCCAGTACTCC +
Preference number: 5 (lower is better)
Translates to: RVDDKTHPLEHTPAACRRLVMPK*GPGQYS
Trigger: GGAGTACTGGCCAGGACCCAACTTTGGCATCACCAA...ACGCCTGCATGCAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp TCTTCACCAAACAAGGGACCTCCCAGCATCTTGTGCACCTTGGACAGTGTCCTGTTGGTGATGCCAAAGTaGGGTCCTGGCCAGTACTCC +
Preference number: 5 (lower is better)
Translates to: SSPNKGPPSILCTLDSVLLVMPK*GPGQYS
Trigger: GGAGTACTGGCCAGGACCCAACTTTGGCATCACCAA...CAGGACACTGTCCAAGGTGCACAAGATGCTGGGAGGTCCCTTGTTTGGTGAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp AGACTGAAAATGCCTCACACAAGCACGTGGTCAGCTGCCCTGTGGCTTCCTTGGTCATTTCTGCTCTTCTaGGTGGCCGCTCTCTTCAGC +
Preference number: 5 (lower is better)
Translates to: RLKMPHTSTWSAALWLPWSFLLF*VAALFS
Trigger: GCTGAAGAGAGCGGCCACCAAGAAGAGCAGAAATGA...CCAAGGAAGCCACAGGGCAGCTGACCACGTGCTTGTGTGAGGCATTTTCAGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp AGACTGAAAATGCCTCACACAAGCACGTGGTCAGCTGCCCTGTGGCTTCCTTGGAGGTGTCGAAGTTGGTaGTGGGAGTCTCATCCTGGA +
Preference number: 5 (lower is better)
Translates to: RLKMPHTSTWSAALWLPWRCRSW*WESHPG
Trigger: TCCAGGATGAGACTCCCACAACCAACTTCGACACCT...CCAAGGAAGCCACAGGGCAGCTGACCACGTGCTTGTGTGAGGCATTTTCAGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp AGACTGAAAATGCCTCACACAAGCACGTGGTCAGCTGCCCTGTGGCTTCCTTGGATCTCCTCTTCATCCTaGGTCAGCTCTTGGGCGTTG +
Preference number: 5 (lower is better)
Translates to: RLKMPHTSTWSAALWLPWISSSS*VSSWAL
Trigger: CAACGCCCAAGAGCTGACCAAGGATGAAGAGGAGAT...CCAAGGAAGCCACAGGGCAGCTGACCACGTGCTTGTGTGAGGCATTTTCAGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp GGATTCTCGACCCAACACTGCCTGGGGAAATGGCTGTGGTTCTGCATGGAATGGATCTCCTCTTCATCCTaGGTCAGCTCTTGGGCGTTG +
Preference number: 5 (lower is better)
Translates to: GFSTQHCLGKWLWFCMEWISSSS*VSSWAL
Trigger: CAACGCCCAAGAGCTGACCAAGGATGAAGAGGAGAT...CCATTCCATGCAGAACCACAGCCATTTCCCCAGGCAGTGTTGGGTCGAGAATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp GCTTGCCTGAGTGAGCATTCGCTGACACTGGCGGGCTGCACAAGCCACGACTGTCACTTCTTTGGCCTTTaGCAGAGCAAGCTTCTGATT +
Preference number: 5 (lower is better)
Translates to: ACLSEHSLTLAGCTSHDCHFFGL*QSKLLI
Trigger: AATCAGAAGCTTGCTCTGCAAAAGGCCAAAGAAGTG...ACAGTCGTGGCTTGTGCAGCCCGCCAGTGTCAGCGAATGCTCACTCAGGCAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp CCCGAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCACTTCTTTGGCCTTTaGCAGAGCAAGCTTCTGATT +
Preference number: 5 (lower is better)
Translates to: PEGRLPRVDDKTHPLEHTHFFGL*QSKLLI
Trigger: AATCAGAAGCTTGCTCTGCAAAAGGCCAAAGAAGTG...CGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTCGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp ACACACACACACACACACACATCACACACAATTTCTTTGAGGAGAATCATGGGGCACACCGAGCGCGCCTaGGCCGAGTTCTGCTGCCTG +
Preference number: 5 (lower is better)
Translates to: THTHTHTSHTISLRRIMGHTERA*AEFCCL
Trigger: CAGGCAGCAGAACTCGGCCAAGGCGCGCTCGGTGTG...CCCCATGATTCTCCTCAAAGAAATTGTGTGTGATGTGTGTGTGTGTGTGTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp CAGCAAACTAGTCAATCACAGAATTTCTTTTTAAGTAGGTCCCAGTTGTGTTGCGCCTCAGGTCGGGCTTaGCCTCCCACGGGCCCCCGC +
Preference number: 5 (lower is better)
Translates to: QQTSQSQNFFLSRSQLCCASGRA*PPTGPR
Trigger: GCGGGGGCCCGTGGGAGGCAAAGCCCGACCTGAGGC...GCAACACAACTGGGACCTACTTAAAAAGAAATTCTGTGATTGACTAGTTTGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp TCTTCACCAAACAAGGGACCTCCCAGCATCTTGTGCACCTTGGACAGTGTCCTGCTTCTTCCCCTCTGCTaGGCTTTCCAGGTCCACGTT +
Preference number: 5 (lower is better)
Translates to: SSPNKGPPSILCTLDSVLLLPLC*AFQVHV
Trigger: AACGTGGACCTGGAAAGCCAAGCAGAGGGGAAGAAG...CAGGACACTGTCCAAGGTGCACAAGATGCTGGGAGGTCCCTTGTTTGGTGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp GAAAATGCCTCACACAAGCACGTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCAGGTATTTCAGAGCGTaGTTCCTGGGCGAGTCTGTG +
Preference number: 5 (lower is better)
Translates to: ENASHKHVVSCPVASLETRYFRA*FLGESV
Trigger: CACAGACTCGCCCAGGAACAACGCTCTGAAATACCT...GGTTTCCAAGGAAGCCACAGGGCAGCTGACCACGTGCTTGTGTGAGGCATTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp CGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTCTTGGTCAGGGTGGTGGTTTGATGTCTTTCCCTTaGGATCCTGAGAAAGCAAAC +
Preference number: 5 (lower is better)
Translates to: RLSGHGAASTSGLGQGGGLMSFP*DPEKAN
Trigger: GTTTGCTTTCTCAGGATCCAAAGGGAAAGACATCAA...ACCACCACCCTGACCAAGACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CAA 90 bp GCTGCATGCAGGCGTCTGAGCGGTCACGGTGCAGCTAGCACCAGTGGTCTTGGTAGGACTCTCAGAGACTaGATGGTATTGATGTCTTTC +
Preference number: 5 (lower is better)
Translates to: AACRRLSGHGAASTSGLGRTLRD*MVLMSF
Trigger: GAAAGACATCAATACCATCAAGTCTCTGAGAGTCCT...ACCAAGACCACTGGTGCTAGCTGCACCGTGACCGCTCAGACGCCTGCATGCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS-3UTR CAA 90 bp GTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCCCTTCCACTCGTGGGAGGAGGAGGACTCTCAGAGACTaGATGGTATTGATGTCTTTC +
Preference number: 5 (lower is better)
Translates to: VVSCPVASLETPSTRGRRRTLRD*MVLMSF
Trigger: GAAAGACATCAATACCATCAAGTCTCTGAGAGTCCT...CCTCCTCCCACGAGTGGAAGGGGTTTCCAAGGAAGCCACAGGGCAGCTGACCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp TCTTCACCAAACAAGGGACCTCCCAGCATCTTGTGCACCTTGGACAGTGTCCTGAACACAGCCTTGAGCTaGGGCAGCCGTTTGATGGTC +
Preference number: 5 (lower is better)
Translates to: SSPNKGPPSILCTLDSVLNTALS*GSRLMV
Trigger: GACCATCAAACGGCTGCCCAAGCTCAAGGCTGTGTT...CAGGACACTGTCCAAGGTGCACAAGATGCTGGGAGGTCCCTTGTTTGGTGAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp CGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGCATGCAGGCGTCAGTCAAACACAGCCTaGAGCTTGGGCAGCCGTTTG +
Preference number: 5 (lower is better)
Translates to: RVDDKTHPLEHTPAACRRQSNTA*SLGSRL
Trigger: CAAACGGCTGCCCAAGCTCAAGGCTGTGTTTGACTG...ACGCCTGCATGCAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp GAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTCGGAGGAAGCTGAGGTaGATGAAATTGTTCGTTTCC +
Preference number: 5 (lower is better)
Translates to: EGRLPRVDDKTHPLEHTPRRKLR*MKLFVS
Trigger: GGAAACGAACAATTTCATCAACCTCAGCTTCCTCCG...AGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277551.6
ENST00000371355.8
ENST00000371372.6
CDS-3UTR CAA 90 bp GCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGCGGAGGAAGCTGAGGTaGATGAAATTGTTCGTTTCC +
Preference number: 5 (lower is better)
Translates to: AGCPVWMIKLIHWNTRLLRRKLR*MKLFVS
Trigger: GGAAACGAACAATTTCATCAACCTCAGCTTCCTCCG...CAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277551.6
ENST00000371355.8
ENST00000371372.6
CDS-3UTR CAA 90 bp ACACACACACACACACACACATCACACACAATTTCTTTGAGGAGAATCATGGGGCCCTGGCGGAGCAGCTaGATCAGCCGCGCAGCTCGA +
Preference number: 5 (lower is better)
Translates to: THTHTHTSHTISLRRIMGPWRSS*ISRAAR
Trigger: TCGAGCTGCGCGGCTGATCAAGCTGCTCCGCCAGGG...CCCCATGATTCTCCTCAAAGAAATTGTGTGTGATGTGTGTGTGTGTGTGTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp GGGGTAGAAGCCAAGAATCCAACACAGATCATCTGGAATTTCAGAACACGGAGGCCACACTCGGTGGCATaGGCCTGCTCATCACAGGCC +
Preference number: 5 (lower is better)
Translates to: GVEAKNPTQIIWNFRTRRPHSVA*ACSSQA
Trigger: GGCCTGTGATGAGCAGGCCAATGCCACCGAGTGTGG...CCTCCGTGTTCTGAAATTCCAGATGATCTGTGTTGGATTCTTGGCTTCTACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp TCTTCACCAAACAAGGGACCTCCCAGCATCTTGTGCACCTTGGACAGTGTCCTGGTCTTCTGGGGCAGATaGGCCCACACAACGGAAATC +
Preference number: 5 (lower is better)
Translates to: SSPNKGPPSILCTLDSVLVFWGR*AHTTEI
Trigger: GATTTCCGTTGTGTGGGCCAATCTGCCCCAGAAGAC...CAGGACACTGTCCAAGGTGCACAAGATGCTGGGAGGTCCCTTGTTTGGTGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp CGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGCATGCAGGCGTGTCTTCTGGGGCAGATaGGCCCACACAACGGAAATC +
Preference number: 5 (lower is better)
Translates to: RVDDKTHPLEHTPAACRRVFWGR*AHTTEI
Trigger: GATTTCCGTTGTGTGGGCCAATCTGCCCCAGAAGAC...ACGCCTGCATGCAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp AGGGAGTCTCCTCGCATAAGCCACAAAGACACGTGGCAAAAAGCTGACATCTTTGCCCCACAGCACTGCTaGGTGCGCCATCCATATCGG +
Preference number: 5 (lower is better)
Translates to: RESPRISHKDTWQKADIFAPQHC*VRHPYR
Trigger: CCGATATGGATGGCGCACCAAGCAGTGCTGTGGGGC...AAAGATGTCAGCTTTTTGCCACGTGTCTTTGTGGCTTATGCGAGGAGACTCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp AGGGAGTCTCCTCGCATAAGCCACAAAGACACGTGGCAAAAAGCTGACATCTTTCTGGCGGTCAGGCACTaGGTCAAGAGCAGCAGAGCC +
Preference number: 5 (lower is better)
Translates to: RESPRISHKDTWQKADIFLAVRH*VKSSRA
Trigger: GGCTCTGCTGCTCTTGACCAAGTGCCTGACCGCCAG...AAAGATGTCAGCTTTTTGCCACGTGTCTTTGTGGCTTATGCGAGGAGACTCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp CCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGCATGCAGGCCAGCAAATGGCTGCCTaGTTTGCCACCATGACATCC +
Preference number: 5 (lower is better)
Translates to: PVWMIKLIHWNTRLLHAGQQMAA*FATMTS
Trigger: GGATGTCATGGTGGCAAACAAGGCAGCCATTTGCTG...GCCTGCATGCAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp CGGTTTAGGGTCTGGTGTGTGGTACGAGACCCAGGAAGGCAGGACAGGAAGGGGGACCAGGCAGCGGTCTaGTGTGTTTTACTTCTATTA +
Preference number: 5 (lower is better)
Translates to: RFRVWCVVRDPGRQDRKGDQAAV*CVLLLL
Trigger: TAATAGAAGTAAAACACACAAGACCGCTGCCTGGTC...CCCCTTCCTGTCCTGCCTTCCTGGGTCTCGTACCACACACCAGACCCTAAACCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp CCCGAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGACACATCCTTCTACTTaGCAACAGGAGCACAGTGAT +
Preference number: 5 (lower is better)
Translates to: PEGRLPRVDDKTHPLEHTTHPST*QQEHSD
Trigger: ATCACTGTGCTCCTGTTGCAAAGTAGAAGGATGTGT...CGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTCGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp GCTAGGCTGTGTGGGTTTAGAAAAGTGGATTCTCGACCCAACACTGCCTGGGGATCATTTCTGCTCTTCTaGGTGGCCGCTCTCTTCAGC +
Preference number: 5 (lower is better)
Translates to: ARLCGFRKVDSRPNTAWGSFLLF*VAALFS
Trigger: GCTGAAGAGAGCGGCCACCAAGAAGAGCAGAAATGA...TCCCCAGGCAGTGTTGGGTCGAGAATCCACTTTTCTAAACCCACACAGCCTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp CGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGCATGCAGGCGTAGGTGTCGAAGTTGGTaGTGGGAGTCTCATCCTGGA +
Preference number: 5 (lower is better)
Translates to: RVDDKTHPLEHTPAACRRRCRSW*WESHPG
Trigger: TCCAGGATGAGACTCCCACAACCAACTTCGACACCT...ACGCCTGCATGCAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp GCTAGGCTGTGTGGGTTTAGAAAAGTGGATTCTCGACCCAACACTGCCTGGGGAAGGTGTCGAAGTTGGTaGTGGGAGTCTCATCCTGGA +
Preference number: 5 (lower is better)
Translates to: ARLCGFRKVDSRPNTAWGRCRSW*WESHPG
Trigger: TCCAGGATGAGACTCCCACAACCAACTTCGACACCT...TCCCCAGGCAGTGTTGGGTCGAGAATCCACTTTTCTAAACCCACACAGCCTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp CGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGCATGCAGGCGTATCTCCTCTTCATCCTaGGTCAGCTCTTGGGCGTTG +
Preference number: 5 (lower is better)
Translates to: RVDDKTHPLEHTPAACRRISSSS*VSSWAL
Trigger: CAACGCCCAAGAGCTGACCAAGGATGAAGAGGAGAT...ACGCCTGCATGCAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp CGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGCATGCAGGCGTAGGTATTTCAGAGCGTaGTTCCTGGGCGAGTCTGTG +
Preference number: 5 (lower is better)
Translates to: RVDDKTHPLEHTPAACRRRYFRA*FLGESV
Trigger: CACAGACTCGCCCAGGAACAACGCTCTGAAATACCT...ACGCCTGCATGCAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp CGGTTTAGGGTCTGGTGTGTGGTACGAGACCCAGGAAGGCAGGACAGGAAGGGGAGGACTCTCAGAGACTaGATGGTATTGATGTCTTTC +
Preference number: 5 (lower is better)
Translates to: RFRVWCVVRDPGRQDRKGRTLRD*MVLMSF
Trigger: GAAAGACATCAATACCATCAAGTCTCTGAGAGTCCT...CCCCTTCCTGTCCTGCCTTCCTGGGTCTCGTACCACACACCAGACCCTAAACCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp GCTAGGCTGTGTGGGTTTAGAAAAGTGGATTCTCGACCCAACACTGCCTGGGGACAGCAGCATCAGGGCTaGCAAAAACGTCCGGAAGTT +
Preference number: 5 (lower is better)
Translates to: ARLCGFRKVDSRPNTAWGQQHQG*QKRPEV
Trigger: AACTTCCGGACGTTTTTGCAAGCCCTGATGCTGCTG...TCCCCAGGCAGTGTTGGGTCGAGAATCCACTTTTCTAAACCCACACAGCCTAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp GCGGTCACGGTGCAGCTAGCACCAGTGGTCTTGGTCAGGGTGGTGGTAGCTGTGCTGAGGTTGATGAAATaGTTCTTTACCGCAATCTCT +
Preference number: 5 (lower is better)
Translates to: AVTVQLAPVVLVRVVVAVLRLMK*FFTAIS
Trigger: AGAGATTGCGGTAAAGAACAATTTCATCAACCTCAG...CACAGCTACCACCACCCTGACCAAGACCACTGGTGCTAGCTGCACCGTGACCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000277549.9
CDS-3UTR CAA 90 bp AGGGAGTCTCCTCGCATAAGCCACAAAGACACGTGGCAAAAAGCTGACATCTTTCCCAGGACACGGGATTaGGACTCCTGGGTCCTTCTC +
Preference number: 5 (lower is better)
Translates to: RESPRISHKDTWQKADIFPRTRD*DSWVLL
Trigger: GAGAAGGACCCAGGAGTCCAAATCCCGTGTCCTGGG...AAAGATGTCAGCTTTTTGCCACGTGTCTTTGTGGCTTATGCGAGGAGACTCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp GCTAGGCTGTGTGGGTTTAGAAAAGTGGATTCTCGACCCAACACTGCCTGGGGACCTTCCTACCAGCCTTaGCCTCTCTTCTGCTGTATG +
Preference number: 5 (lower is better)
Translates to: ARLCGFRKVDSRPNTAWGPSYQP*PLFCCM
Trigger: CATACAGCAGAAGAGAGGCAAAGGCTGGTAGGAAGG...TCCCCAGGCAGTGTTGGGTCGAGAATCCACTTTTCTAAACCCACACAGCCTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp GAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTACACATCCTTCTACTTaGCAACAGGAGCACAGTGAT +
Preference number: 5 (lower is better)
Translates to: EGRLPRVDDKTHPLEHTPTHPST*QQEHSD
Trigger: ATCACTGTGCTCCTGTTGCAAAGTAGAAGGATGTGT...AGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS CCA 90 bp ATCTCATCAGGCTTATGGGGTGGTACCAGCAAGTCCAAAGTCTTCTaGGGCAGATTGGCCCACACAACGGAAATCTCCTTCCTCAACTCC +
Preference number: 5 (lower is better)
Translates to: ISSGLWGGTSKSKVF*GRLAHTTEISFLNS
Trigger: GGAGTTGAGGAAGGAGATTTCCGTTGTGTGGGCCAATCTGCCCCAGAAGACTTTGGACTTGCTGGTACCACCCCATAAGCCTGATGAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp GGGGTAGAAGCCAAGAATCCAACACAGATCATCTGGAATTTCAGAACACGGAGGTCCGCATCTGTGCTGTaGGGGAAACAGGCCTTGTGG +
Preference number: 5 (lower is better)
Translates to: GVEAKNPTQIIWNFRTRRSASVL*GKQALW
Trigger: CCACAAGGCCTGTTTCCCCAACAGCACAGATGCGGA...CCTCCGTGTTCTGAAATTCCAGATGATCTGTGTTGGATTCTTGGCTTCTACCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp CAGCAAACTAGTCAATCACAGAATTTCTTTTTAAGTAGGTCCCAGTTGTGTTGCGCGGGGGTCTTGTCCTaGTCGCGGTGCCGGTGGTGC +
Preference number: 5 (lower is better)
Translates to: QQTSQSQNFFLSRSQLCCAGVLS*SRCRWC
Trigger: GCACCACCGGCACCGCGACAAGGACAAGACCCCCGC...GCAACACAACTGGGACCTACTTAAAAAGAAATTCTGTGATTGACTAGTTTGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp TCATGGGGTAGAAGCCAAGAATCCAACACAGATCATCTGGAATTTCAGAACACGAGCTTGGGCAGCCGTTaGATGGTCTTGAGGGGCCGC +
Preference number: 5 (lower is better)
Translates to: SWGRSQESNTDHLEFQNTSLGSR*MVLRGR
Trigger: GCGGCCCCTCAAGACCATCAAACGGCTGCCCAAGCT...CGTGTTCTGAAATTCCAGATGATCTGTGTTGGATTCTTGGCTTCTACCCCATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp ACACACACACACACACACACATCACACACAATTTCTTTGAGGAGAATCATGGGGCCACACTCGGTGGCATaGGCCTGCTCATCACAGGCC +
Preference number: 5 (lower is better)
Translates to: THTHTHTSHTISLRRIMGPHSVA*ACSSQA
Trigger: GGCCTGTGATGAGCAGGCCAATGCCACCGAGTGTGG...CCCCATGATTCTCCTCAAAGAAATTGTGTGTGATGTGTGTGTGTGTGTGTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp AGACTGAAAATGCCTCACACAAGCACGTGGTCAGCTGCCCTGTGGCTTCCTTGGCAGGAGACAGACTCTTaGATGCCACTCTCTTGGTTT +
Preference number: 5 (lower is better)
Translates to: RLKMPHTSTWSAALWLPWQETDS*MPLSWF
Trigger: AAACCAAGAGAGTGGCATCAAAGAGTCTGTCTCCTG...CCAAGGAAGCCACAGGGCAGCTGACCACGTGCTTGTGTGAGGCATTTTCAGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp GAAAATGCCTCACACAAGCACGTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCCAGGAGACAGACTCTTaGATGCCACTCTCTTGGTTT +
Preference number: 5 (lower is better)
Translates to: ENASHKHVVSCPVASLETQETDS*MPLSWF
Trigger: AAACCAAGAGAGTGGCATCAAAGAGTCTGTCTCCTG...GGTTTCCAAGGAAGCCACAGGGCAGCTGACCACGTGCTTGTGTGAGGCATTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp GAGGGCCGGCTGCCCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTACATGCACACATAACTaGTTCAAACTACAGCCACTG +
Preference number: 5 (lower is better)
Translates to: EGRLPRVDDKTHPLEHTPTCTHN*FKLQPL
Trigger: CAGTGGCTGTAGTTTGAACAAGTTATGTGTGCATGT...AGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGGGCAGCCGGCCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp GGGGTAGAAGCCAAGAATCCAACACAGATCATCTGGAATTTCAGAACACGGAGGCTTCTTCCCCTCTGCTaGGCTTTCCAGGTCCACGTT +
Preference number: 5 (lower is better)
Translates to: GVEAKNPTQIIWNFRTRRLLPLC*AFQVHV
Trigger: AACGTGGACCTGGAAAGCCAAGCAGAGGGGAAGAAG...CCTCCGTGTTCTGAAATTCCAGATGATCTGTGTTGGATTCTTGGCTTCTACCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp AGGGAGTCTCCTCGCATAAGCCACAAAGACACGTGGCAAAAAGCTGACATCTTTGTCTTCTGGGGCAGATaGGCCCACACAACGGAAATC +
Preference number: 5 (lower is better)
Translates to: RESPRISHKDTWQKADIFVFWGR*AHTTEI
Trigger: GATTTCCGTTGTGTGGGCCAATCTGCCCCAGAAGAC...AAAGATGTCAGCTTTTTGCCACGTGTCTTTGTGGCTTATGCGAGGAGACTCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp TCACATGCACAGTCCGAGATTCCTGGTTTATTCTATTGGAATAAAATACTCTGTCTGCTGAGGGAGGGCTaGGGCTTCGGGGGCTCACGG +
Preference number: 5 (lower is better)
Translates to: SHAQSEIPGLFYWNKILCLLREG*GFGGSR
Trigger: CCGTGAGCCCCCGAAGCCCAAGCCCTCCCTCAGCAG...ACAGAGTATTTTATTCCAATAGAATAAACCAGGAATCTCGGACTGTGCATGTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp GAAAATGCCTCACACAAGCACGTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCGACCAGGCAGCGGTCTaGTGTGTTTTACTTCTATTA +
Preference number: 5 (lower is better)
Translates to: ENASHKHVVSCPVASLETDQAAV*CVLLLL
Trigger: TAATAGAAGTAAAACACACAAGACCGCTGCCTGGTC...GGTTTCCAAGGAAGCCACAGGGCAGCTGACCACGTGCTTGTGTGAGGCATTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp CGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGCATGCAGGCGTTTAAGTAGGTCCCAGTaGTGTTGCATGGTTGGGACT +
Preference number: 5 (lower is better)
Translates to: RVDDKTHPLEHTPAACRRLSRSQ*CCMVGT
Trigger: AGTCCCAACCATGCAACACAACTGGGACCTACTTAA...ACGCCTGCATGCAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp GCTAGGCTGTGTGGGTTTAGAAAAGTGGATTCTCGACCCAACACTGCCTGGGGATTAAGTAGGTCCCAGTaGTGTTGCATGGTTGGGACT +
Preference number: 5 (lower is better)
Translates to: ARLCGFRKVDSRPNTAWGLSRSQ*CCMVGT
Trigger: AGTCCCAACCATGCAACACAACTGGGACCTACTTAA...TCCCCAGGCAGTGTTGGGTCGAGAATCCACTTTTCTAAACCCACACAGCCTAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS GCA 90 bp TTCAGCCACTTCTTTGGCCTTTTGCAGAGCAAGCTTCTGATTGGCTaGTTCTTCCATCTCCTCTTCATCCTTGGTCAGCTCTTGGGCGTT +
Preference number: 5 (lower is better)
Translates to: FSHFFGLLQSKLLIG*FFHLLFILGQLLGV
Trigger: AACGCCCAAGAGCTGACCAAGGATGAAGAGGAGATGGAAGAAGCAGCCAATCAGAAGCTTGCTCTGCAAAAGGCCAAAGAAGTGGCTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp AGGGAGTCTCCTCGCATAAGCCACAAAGACACGTGGCAAAAAGCTGACATCTTTAGGTGTCGAAGTTGGTaGTGGGAGTCTCATCCTGGA +
Preference number: 5 (lower is better)
Translates to: RESPRISHKDTWQKADIFRCRSW*WESHPG
Trigger: TCCAGGATGAGACTCCCACAACCAACTTCGACACCT...AAAGATGTCAGCTTTTTGCCACGTGTCTTTGTGGCTTATGCGAGGAGACTCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp TCTTCACCAAACAAGGGACCTCCCAGCATCTTGTGCACCTTGGACAGTGTCCTGCACTTCTTTGGCCTTTaGCAGAGCAAGCTTCTGATT +
Preference number: 5 (lower is better)
Translates to: SSPNKGPPSILCTLDSVLHFFGL*QSKLLI
Trigger: AATCAGAAGCTTGCTCTGCAAAAGGCCAAAGAAGTG...CAGGACACTGTCCAAGGTGCACAAGATGCTGGGAGGTCCCTTGTTTGGTGAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp GAAAATGCCTCACACAAGCACGTGGTCAGCTGCCCTGTGGCTTCCTTGGAAACCTTGATGTCTTTCCCTTaGGATCCTGAGAAAGCAAAC +
Preference number: 5 (lower is better)
Translates to: ENASHKHVVSCPVASLETLMSFP*DPEKAN
Trigger: GTTTGCTTTCTCAGGATCCAAAGGGAAAGACATCAA...GGTTTCCAAGGAAGCCACAGGGCAGCTGACCACGTGCTTGTGTGAGGCATTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp GGGGTAGAAGCCAAGAATCCAACACAGATCATCTGGAATTTCAGAACACGGAGGCAGCAGCATCAGGGCTaGCAAAAACGTCCGGAAGTT +
Preference number: 5 (lower is better)
Translates to: GVEAKNPTQIIWNFRTRRQQHQG*QKRPEV
Trigger: AACTTCCGGACGTTTTTGCAAGCCCTGATGCTGCTG...CCTCCGTGTTCTGAAATTCCAGATGATCTGTGTTGGATTCTTGGCTTCTACCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp GGGGTAGAAGCCAAGAATCCAACACAGATCATCTGGAATTTCAGAACACGGAGGTTTGATGCCACTCTCTaGGTTTTGTATGGCCCCGCC +
Preference number: 5 (lower is better)
Translates to: GVEAKNPTQIIWNFRTRRFDATL*VLYGPA
Trigger: GGCGGGGCCATACAAAACCAAGAGAGTGGCATCAAA...CCTCCGTGTTCTGAAATTCCAGATGATCTGTGTTGGATTCTTGGCTTCTACCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp TCATGGGGTAGAAGCCAAGAATCCAACACAGATCATCTGGAATTTCAGAACACGCTAGCACCAGTGGTCTaGGTCAGGGTGGTGGTAGCT +
Preference number: 5 (lower is better)
Translates to: SWGRSQESNTDHLEFQNTLAPVV*VRVVVA
Trigger: AGCTACCACCACCCTGACCAAGACCACTGGTGCTAG...CGTGTTCTGAAATTCCAGATGATCTGTGTTGGATTCTTGGCTTCTACCCCATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp AGGGAGTCTCCTCGCATAAGCCACAAAGACACGTGGCAAAAAGCTGACATCTTTCAGCAAATGGCTGCCTaGTTTGCCACCATGACATCC +
Preference number: 5 (lower is better)
Translates to: RESPRISHKDTWQKADIFQQMAA*FATMTS
Trigger: GGATGTCATGGTGGCAAACAAGGCAGCCATTTGCTG...AAAGATGTCAGCTTTTTGCCACGTGTCTTTGTGGCTTATGCGAGGAGACTCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp GGGGTAGAAGCCAAGAATCCAACACAGATCATCTGGAATTTCAGAACACGGAGGAGCATCTTGTGCACCTaGGACAGTGTCCTGAGCATG +
Preference number: 5 (lower is better)
Translates to: GVEAKNPTQIIWNFRTRRSILCT*DSVLSM
Trigger: CATGCTCAGGACACTGTCCAAGGTGCACAAGATGCT...CCTCCGTGTTCTGAAATTCCAGATGATCTGTGTTGGATTCTTGGCTTCTACCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp GGATTCTCGACCCAACACTGCCTGGGGAAATGGCTGTGGTTCTGCATGGAATGGACATGCACACATAACTaGTTCAAACTACAGCCACTG +
Preference number: 5 (lower is better)
Translates to: GFSTQHCLGKWLWFCMEWTCTHN*FKLQPL
Trigger: CAGTGGCTGTAGTTTGAACAAGTTATGTGTGCATGT...CCATTCCATGCAGAACCACAGCCATTTCCCCAGGCAGTGTTGGGTCGAGAATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp CCCGTGTGGATGATAAAACTCATCCACTGGAACACACGCCTGCTGCATGCAGGCAGAGACTTGATGGTATaGATGTCTTTCCCTTTGGAT +
Preference number: 5 (lower is better)
Translates to: PVWMIKLIHWNTRLLHAGRDLMV*MSFPLD
Trigger: ATCCAAAGGGAAAGACATCAATACCATCAAGTCTCT...GCCTGCATGCAGCAGGCGTGTGTTCCAGTGGATGAGTTTTATCATCCACACGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp CAGCAAACTAGTCAATCACAGAATTTCTTTTTAAGTAGGTCCCAGTTGTGTTGCAGCTTGGGCAGCCGTTaGATGGTCTTGAGGGGCCGC +
Preference number: 5 (lower is better)
Translates to: QQTSQSQNFFLSRSQLCCSLGSR*MVLRGR
Trigger: GCGGCCCCTCAAGACCATCAAACGGCTGCCCAAGCT...GCAACACAACTGGGACCTACTTAAAAAGAAATTCTGTGATTGACTAGTTTGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp TCATGGGGTAGAAGCCAAGAATCCAACACAGATCATCTGGAATTTCAGAACACGAACGTCCGGAAGTTGTaGTGGCGGTTGATGCTGGTG +
Preference number: 5 (lower is better)
Translates to: SWGRSQESNTDHLEFQNTNVRKL*WRLMLV
Trigger: CACCAGCATCAACCGCCACAACAACTTCCGGACGTT...CGTGTTCTGAAATTCCAGATGATCTGTGTTGGATTCTTGGCTTCTACCCCATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS TCA 90 bp TCACAGCCACAAAGAGGTTCAACATCAGAAAGGAGCACAGGAAGATaGAGGAGACGAAGTAGAAGTAGGCAAAGTCACTTCCACACTCGG +
Preference number: 5 (lower is better)
Translates to: SQPQRGSTSERSTGR*RRRSRSRQSHFHTR
Trigger: CCGAGTGTGGAAGTGACTTTGCCTACTTCTACTTCGTCTCCTTCATCTTCCTGTGCTCCTTTCTGATGTTGAACCTCTTTGTGGCTGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
ENST00000413253.1
CDS-3UTR CAA 90 bp ACACACACACACACACACACATCACACACAATTTCTTTGAGGAGAATCATGGGGATGACTTCCTCCGCCTaGAAGATCCACTCCAGGTAC +
Preference number: 5 (lower is better)
Translates to: THTHTHTSHTISLRRIMGMTSSA*KIHSRY
Trigger: GTACCTGGAGTGGATCTTCAAGGCGGAGGAAGTCAT...CCCCATGATTCTCCTCAAAGAAATTGTGTGTGATGTGTGTGTGTGTGTGTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp ACACACACACACACACACACATCACACACAATTTCTTTGAGGAGAATCATGGGGAGGTATTTCAGAGCGTaGTTCCTGGGCGAGTCTGTG +
Preference number: 5 (lower is better)
Translates to: THTHTHTSHTISLRRIMGRYFRA*FLGESV
Trigger: CACAGACTCGCCCAGGAACAACGCTCTGAAATACCT...CCCCATGATTCTCCTCAAAGAAATTGTGTGTGATGTGTGTGTGTGTGTGTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp TCTTCACCAAACAAGGGACCTCCCAGCATCTTGTGCACCTTGGACAGTGTCCTGAGAGACTTGATGGTATaGATGTCTTTCCCTTTGGAT +
Preference number: 5 (lower is better)
Translates to: SSPNKGPPSILCTLDSVLRDLMV*MSFPLD
Trigger: ATCCAAAGGGAAAGACATCAATACCATCAAGTCTCT...CAGGACACTGTCCAAGGTGCACAAGATGCTGGGAGGTCCCTTGTTTGGTGAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp TCACATGCACAGTCCGAGATTCCTGGTTTATTCTATTGGAATAAAATACTCTGTTGCGGTACCCAGGGCTaGGACCCTGCTCCTCATAGG +
Preference number: 5 (lower is better)
Translates to: SHAQSEIPGLFYWNKILCCGTQG*DPAPHR
Trigger: CCTATGAGGAGCAGGGTCCAAGCCCTGGGTACCGCA...ACAGAGTATTTTATTCCAATAGAATAAACCAGGAATCTCGGACTGTGCATGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp CAGCAAACTAGTCAATCACAGAATTTCTTTTTAAGTAGGTCCCAGTTGTGTTGCTGTATGGCCCCGCCATaGCTGAGGGAGGTGGAACTC +
Preference number: 5 (lower is better)
Translates to: QQTSQSQNFFLSRSQLCCCMAPP*LREVEL
Trigger: GAGTTCCACCTCCCTCAGCAATGGCGGGGCCATACA...GCAACACAACTGGGACCTACTTAAAAAGAAATTCTGTGATTGACTAGTTTGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp TCATGGGGTAGAAGCCAAGAATCCAACACAGATCATCTGGAATTTCAGAACACGTTTGATGCCACTCTCTaGGTTTTGTATGGCCCCGCC +
Preference number: 5 (lower is better)
Translates to: SWGRSQESNTDHLEFQNTFDATL*VLYGPA
Trigger: GGCGGGGCCATACAAAACCAAGAGAGTGGCATCAAA...CGTGTTCTGAAATTCCAGATGATCTGTGTTGGATTCTTGGCTTCTACCCCATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp TCACATGCACAGTCCGAGATTCCTGGTTTATTCTATTGGAATAAAATACTCTGTCTGGCGGTCAGGCACTaGGTCAAGAGCAGCAGAGCC +
Preference number: 5 (lower is better)
Translates to: SHAQSEIPGLFYWNKILCLAVRH*VKSSRA
Trigger: GGCTCTGCTGCTCTTGACCAAGTGCCTGACCGCCAG...ACAGAGTATTTTATTCCAATAGAATAAACCAGGAATCTCGGACTGTGCATGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp AGGGAGTCTCCTCGCATAAGCCACAAAGACACGTGGCAAAAAGCTGACATCTTTCGGAGGAAGCTGAGGTaGATGAAATTGTTCGCAATC +
Preference number: 5 (lower is better)
Translates to: RESPRISHKDTWQKADIFRRKLR*MKLFAI
Trigger: GATTGCGAACAATTTCATCAACCTCAGCTTCCTCCG...AAAGATGTCAGCTTTTTGCCACGTGTCTTTGTGGCTTATGCGAGGAGACTCCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371357.5
ENST00000371363.5
CDS-3UTR CAA 90 bp CAGCAAACTAGTCAATCACAGAATTTCTTTTTAAGTAGGTCCCAGTTGTGTTGCTCCGCATCTGTGCTGTaGGGGAAACAGGCCTTGTGG +
Preference number: 5 (lower is better)
Translates to: QQTSQSQNFFLSRSQLCCSASVL*GKQALW
Trigger: CCACAAGGCCTGTTTCCCCAACAGCACAGATGCGGA...GCAACACAACTGGGACCTACTTAAAAAGAAATTCTGTGATTGACTAGTTTGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp TCACATGCACAGTCCGAGATTCCTGGTTTATTCTATTGGAATAAAATACTCTGTCACTCCAGGTACCCGTaGAGCTCTCGCTCGATCTGC +
Preference number: 5 (lower is better)
Translates to: SHAQSEIPGLFYWNKILCHSRYP*SSRSIC
Trigger: GCAGATCGAGCGAGAGCTCAACGGGTACCTGGAGTG...ACAGAGTATTTTATTCCAATAGAATAAACCAGGAATCTCGGACTGTGCATGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp AGGGAGTCTCCTCGCATAAGCCACAAAGACACGTGGCAAAAAGCTGACATCTTTCACTTCTTTGGCCTTTaGCAGAGCAAGCTTCTGATT +
Preference number: 5 (lower is better)
Translates to: RESPRISHKDTWQKADIFHFFGL*QSKLLI
Trigger: AATCAGAAGCTTGCTCTGCAAAAGGCCAAAGAAGTG...AAAGATGTCAGCTTTTTGCCACGTGTCTTTGTGGCTTATGCGAGGAGACTCCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp ACACACACACACACACACACATCACACACAATTTCTTTGAGGAGAATCATGGGGACTTCAGCCACTTCTTaGGCCTTTTGCAGAGCAAGC +
Preference number: 5 (lower is better)
Translates to: THTHTHTSHTISLRRIMGTSATS*AFCRAS
Trigger: GCTTGCTCTGCAAAAGGCCAAAGAAGTGGCTGAAGT...CCCCATGATTCTCCTCAAAGAAATTGTGTGTGATGTGTGTGTGTGTGTGTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp CAGCAAACTAGTCAATCACAGAATTTCTTTTTAAGTAGGTCCCAGTTGTGTTGCGAACGACTGCCGGTTTaGGGGCATGTACCGTGTCAG +
Preference number: 5 (lower is better)
Translates to: QQTSQSQNFFLSRSQLCCERLPV*GHVPCQ
Trigger: CTGACACGGTACATGCCCCAAAACCGGCAGTCGTTC...GCAACACAACTGGGACCTACTTAAAAAGAAATTCTGTGATTGACTAGTTTGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp AGGGAGTCTCCTCGCATAAGCCACAAAGACACGTGGCAAAAAGCTGACATCTTTACACATCCTTCTACTTaGCAACAGGAGCACAGTGAT +
Preference number: 5 (lower is better)
Translates to: RESPRISHKDTWQKADIFTHPST*QQEHSD
Trigger: ATCACTGTGCTCCTGTTGCAAAGTAGAAGGATGTGT...AAAGATGTCAGCTTTTTGCCACGTGTCTTTGTGGCTTATGCGAGGAGACTCCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp CAGCAAACTAGTCAATCACAGAATTTCTTTTTAAGTAGGTCCCAGTTGTGTTGCGGGAAGGTGTCGAAGTaGGTTGTGGGAGTCTCATCC +
Preference number: 5 (lower is better)
Translates to: QQTSQSQNFFLSRSQLCCGKVSK*VVGVSS
Trigger: GGATGAGACTCCCACAACCAACTTCGACACCTTCCC...GCAACACAACTGGGACCTACTTAAAAAGAAATTCTGTGATTGACTAGTTTGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp AGGGAGTCTCCTCGCATAAGCCACAAAGACACGTGGCAAAAAGCTGACATCTTTAGGACTCTCAGAGACTaGATGGTATTGATGTCTTTC +
Preference number: 5 (lower is better)
Translates to: RESPRISHKDTWQKADIFRTLRD*MVLMSF
Trigger: GAAAGACATCAATACCATCAAGTCTCTGAGAGTCCT...AAAGATGTCAGCTTTTTGCCACGTGTCTTTGTGGCTTATGCGAGGAGACTCCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp TCATGGGGTAGAAGCCAAGAATCCAACACAGATCATCTGGAATTTCAGAACACGCAGGAGACAGACTCTTaGATGCCACTCTCTTGGTTT +
Preference number: 5 (lower is better)
Translates to: SWGRSQESNTDHLEFQNTQETDS*MPLSWF
Trigger: AAACCAAGAGAGTGGCATCAAAGAGTCTGTCTCCTG...CGTGTTCTGAAATTCCAGATGATCTGTGTTGGATTCTTGGCTTCTACCCCATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp TCACATGCACAGTCCGAGATTCCTGGTTTATTCTATTGGAATAAAATACTCTGTCTAGCACCAGTGGTCTaGGTCAGGGTGGTGGTAGCT +
Preference number: 5 (lower is better)
Translates to: SHAQSEIPGLFYWNKILCLAPVV*VRVVVA
Trigger: AGCTACCACCACCCTGACCAAGACCACTGGTGCTAG...ACAGAGTATTTTATTCCAATAGAATAAACCAGGAATCTCGGACTGTGCATGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp CAGCAAACTAGTCAATCACAGAATTTCTTTTTAAGTAGGTCCCAGTTGTGTTGCAGGTGTCGAAGTTGGTaGTGGGAGTCTCATCCTGGA +
Preference number: 5 (lower is better)
Translates to: QQTSQSQNFFLSRSQLCCRCRSW*WESHPG
Trigger: TCCAGGATGAGACTCCCACAACCAACTTCGACACCT...GCAACACAACTGGGACCTACTTAAAAAGAAATTCTGTGATTGACTAGTTTGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp AGGGAGTCTCCTCGCATAAGCCACAAAGACACGTGGCAAAAAGCTGACATCTTTAGAGACTTGATGGTATaGATGTCTTTCCCTTTGGAT +
Preference number: 5 (lower is better)
Translates to: RESPRISHKDTWQKADIFRDLMV*MSFPLD
Trigger: ATCCAAAGGGAAAGACATCAATACCATCAAGTCTCT...AAAGATGTCAGCTTTTTGCCACGTGTCTTTGTGGCTTATGCGAGGAGACTCCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp CAGCAAACTAGTCAATCACAGAATTTCTTTTTAAGTAGGTCCCAGTTGTGTTGCCCTTCCTACCAGCCTTaGCCTCTCTTCTGCTGTATG +
Preference number: 5 (lower is better)
Translates to: QQTSQSQNFFLSRSQLCCPSYQP*PLFCCM
Trigger: CATACAGCAGAAGAGAGGCAAAGGCTGGTAGGAAGG...GCAACACAACTGGGACCTACTTAAAAAGAAATTCTGTGATTGACTAGTTTGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp TCACATGCACAGTCCGAGATTCCTGGTTTATTCTATTGGAATAAAATACTCTGTATGACTTCCTCCGCCTaGAAGATCCACTCCAGGTAC +
Preference number: 5 (lower is better)
Translates to: SHAQSEIPGLFYWNKILCMTSSA*KIHSRY
Trigger: GTACCTGGAGTGGATCTTCAAGGCGGAGGAAGTCAT...ACAGAGTATTTTATTCCAATAGAATAAACCAGGAATCTCGGACTGTGCATGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp CAGCAAACTAGTCAATCACAGAATTTCTTTTTAAGTAGGTCCCAGTTGTGTTGCAAAAACGTCCGGAAGTaGTTGTGGCGGTTGATGCTG +
Preference number: 5 (lower is better)
Translates to: QQTSQSQNFFLSRSQLCCKNVRK*LWRLML
Trigger: CAGCATCAACCGCCACAACAACTTCCGGACGTTTTT...GCAACACAACTGGGACCTACTTAAAAAGAAATTCTGTGATTGACTAGTTTGCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp CAGCAAACTAGTCAATCACAGAATTTCTTTTTAAGTAGGTCCCAGTTGTGTTGCAGAGACTTGATGGTATaGATGTCTTTCCCTTTGGAT +
Preference number: 5 (lower is better)
Translates to: QQTSQSQNFFLSRSQLCCRDLMV*MSFPLD
Trigger: ATCCAAAGGGAAAGACATCAATACCATCAAGTCTCT...GCAACACAACTGGGACCTACTTAAAAAGAAATTCTGTGATTGACTAGTTTGCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS-3UTR CAA 90 bp CAGCAAACTAGTCAATCACAGAATTTCTTTTTAAGTAGGTCCCAGTTGTGTTGCCTGAGGTTGATGAAATaGTTCGCAATCTCTGTTACT +
Preference number: 5 (lower is better)
Translates to: QQTSQSQNFFLSRSQLCCLRLMK*FAISVT
Trigger: AGTAACAGAGATTGCGAACAATTTCATCAACCTCAG...GCAACACAACTGGGACCTACTTAAAAAGAAATTCTGTGATTGACTAGTTTGCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371357.5
ENST00000371363.5
CDS GCA 72 bp GCGCGCGCCGCTCGCCCTTGGCGCCGGCGCACTCCTTaGTCGGATCCTGGTGCCGGTGCGCGCGGTGGCGTC +
Preference number: 6 (lower is better)
Translates to: ARAARPWRRRTP*SDPGAGARGGV
Trigger: GACGCCACCGCGCGCACCGGCACCAGGATCCGAGCAAGGAGTGCGCCGGCGCCAAGGGCGAGCGGCGCGCGC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS CCA 72 bp CCCGCCGCGGGGGTCTTGTCCTTGTCGCGGTGCCGGTaGTGCCTGCGCGGAGGGTCGACGCCCTCGGGGGCC +
Preference number: 6 (lower is better)
Translates to: PAAGVLSLSRCR*CLRGGSTPSGA
Trigger: GGCCCCCGAGGGCGTCGACCCTCCGCGCAGGCACCACCGGCACCGCGACAAGGACAAGACCCCCGCGGCGGG
79% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS CAA 72 bp CGCGCGCGCCGCTCGCCCTTGGCGCCGGCGCACTCCTaGCTCGGATCCTGGTGCCGGTGCGCGCGGTGGCGT +
Preference number: 6 (lower is better)
Translates to: RARRSPLAPAHS*LGSWCRCARWR
Trigger: ACGCCACCGCGCGCACCGGCACCAGGATCCGAGCAAGGAGTGCGCCGGCGCCAAGGGCGAGCGGCGCGCGCG
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS GCA 72 bp GCCGCGGGGGTCTTGTCCTTGTCGCGGTGCCGGTGGTaGCTGCGCGGAGGGTCGACGCCCTCGGGGGCCTCC +
Preference number: 6 (lower is better)
Translates to: AAGVLSLSRCRW*LRGGSTPSGAS
Trigger: GGAGGCCCCCGAGGGCGTCGACCCTCCGCGCAGGCACCACCGGCACCGCGACAAGGACAAGACCCCCGCGGC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS GCA 72 bp CCCTTGGCGCCGGCGCACTCCTTGCTCGGATCCTGGTaGCGGTGCGCGCGGTGGCGTCGGGGCTCCCGCTCG +
Preference number: 6 (lower is better)
Translates to: PLAPAHSLLGSW*RCARWRRGSRS
Trigger: CGAGCGGGAGCCCCGACGCCACCGCGCGCACCGGCACCAGGATCCGAGCAAGGAGTGCGCCGGCGCCAAGGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS CCA 72 bp CACTCCTTGCTCGGATCCTGGTGCCGGTGCGCGCGGTaGCGTCGGGGCTCCCGCTCGGCCGCCTCCTCCGGG +
Preference number: 6 (lower is better)
Translates to: HSLLGSWCRCAR*RRGSRSAASSG
Trigger: CCCGGAGGAGGCGGCCGAGCGGGAGCCCCGACGCCACCGCGCGCACCGGCACCAGGATCCGAGCAAGGAGTG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS CCA 72 bp TCGCCCTTGGCGCCGGCGCACTCCTTGCTCGGATCCTaGTGCCGGTGCGCGCGGTGGCGTCGGGGCTCCCGC +
Preference number: 6 (lower is better)
Translates to: SPLAPAHSLLGS*CRCARWRRGSR
Trigger: GCGGGAGCCCCGACGCCACCGCGCGCACCGGCACCAGGATCCGAGCAAGGAGTGCGCCGGCGCCAAGGGCGA
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS GCA 72 bp CGGGGGTCTTGTCCTTGTCGCGGTGCCGGTGGTGCCTaGGCGGAGGGTCGACGCCCTCGGGGGCCTCCGCAG +
Preference number: 6 (lower is better)
Translates to: RGSCPCRGAGGA*AEGRRPRGPPQ
Trigger: CTGCGGAGGCCCCCGAGGGCGTCGACCCTCCGCGCAGGCACCACCGGCACCGCGACAAGGACAAGACCCCCG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS GCA 72 bp TGGTCCCCCGCCGCGGGGGTCTTGTCCTTGTCGCGGTaGCGGTGGTGCCTGCGCGGAGGGTCGACGCCCTCG +
Preference number: 6 (lower is better)
Translates to: WSPAAGVLSLSR*RWCLRGGSTPS
Trigger: CGAGGGCGTCGACCCTCCGCGCAGGCACCACCGGCACCGCGACAAGGACAAGACCCCCGCGGCGGGGGACCA
76% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS CAA 72 bp GCTCGGTCCTGGTCCCCCGCCGCGGGGGTCTTGTCCTaGTCGCGGTGCCGGTGGTGCCTGCGCGGAGGGTCG +
Preference number: 6 (lower is better)
Translates to: ARSWSPAAGVLS*SRCRWCLRGGS
Trigger: CGACCCTCCGCGCAGGCACCACCGGCACCGCGACAAGGACAAGACCCCCGCGGCGGGGGACCAGGACCGAGC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS CAA 72 bp GCCTCTGCTCGGTCCTGGTCCCCCGCCGCGGGGGTCTaGTCCTTGTCGCGGTGCCGGTGGTGCCTGCGCGGA +
Preference number: 6 (lower is better)
Translates to: ASARSWSPAAGV*SLSRCRWCLRG
Trigger: TCCGCGCAGGCACCACCGGCACCGCGACAAGGACAAGACCCCCGCGGCGGGGGACCAGGACCGAGCAGAGGC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS TCA 72 bp GCTCCTGGCCAGCTGTTGGCGACGTTGGGTGGCTGCTaGGGGAGGGCTTGGGCTTCGGGGGCTCACGGCCCC +
Preference number: 6 (lower is better)
Translates to: APGQLLATLGGC*GRAWASGAHGP
Trigger: GGGGCCGTGAGCCCCCGAAGCCCAAGCCCTCCCTCAGCAGCCACCCAACGTCGCCAACAGCTGGCCAGGAGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS GCA 72 bp GCCCGCAGGTTCTGCAGCCGTAGCTGGCTGGCCCGCTaGTCCCACACCGAGCGCGCCTTGGCCGAGTTCTGC +
Preference number: 6 (lower is better)
Translates to: ARRFCSRSWLAR*SHTERALAEFC
Trigger: GCAGAACTCGGCCAAGGCGCGCTCGGTGTGGGAGCAGCGGGCCAGCCAGCTACGGCTGCAGAACCTGCGGGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS CCA 72 bp CTCCCGGCACTCAGTGTCGCCCTCGCACAGCCGGGCTaGGGCCTCCTTGCCACAGGGGAAGTCACCCACGGG +
Preference number: 6 (lower is better)
Translates to: LPALSVALAQPG*GLLATGEVTHG
Trigger: CCCGTGGGTGACTTCCCCTGTGGCAAGGAGGCCCCAGCCCGGCTGTGCGAGGGCGACACTGAGTGCCGGGAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS CCA 72 bp GGCCTGTGGGTGGGGTCCCGGCTCCTGGCCAGCTGTTaGCGACGTTGGGTGGCTGCTGAGGGAGGGCTTGGG +
Preference number: 6 (lower is better)
Translates to: GLWVGSRLLASC*RRWVAAEGGLG
Trigger: CCCAAGCCCTCCCTCAGCAGCCACCCAACGTCGCCAACAGCTGGCCAGGAGCCGGGACCCCACCCACAGGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277549.9
ENST00000277551.6
CDS CCA 72 bp GCCCTGTGGGTGGGGTCCCGGCTCCTGGCCAGCTGTTaGCGACGTTGGGTGGCTGCTGAGGGAGGGCTTGGG +
Preference number: 6 (lower is better)
Translates to: ALWVGSRLLASC*RRWVAAEGGLG
Trigger: CCCAAGCCCTCCCTCAGCAGCCACCCAACGTCGCCAACAGCTGGCCAGGAGCCGGGACCCCACCCACAGGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS CCA 72 bp GGCGTTGTGTTCGGAAAGCCCACGGCTGAGCCGGCCTaGGGAGAAGGCAGGGAGGCTGGTCTGAGCCCCGGC +
Preference number: 6 (lower is better)
Translates to: GVVFGKPTAEPA*GEGREAGLSPG
Trigger: GCCGGGGCTCAGACCAGCCTCCCTGCCTTCTCCCCAGGCCGGCTCAGCCGTGGGCTTTCCGAACACAACGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS CCA 72 bp GTGGTGGTGGTGGTGCGACGACGCCTGGCTAGGGGGTaGGCGGTCCGGGGTGGTGCTGCAAAGATGAGTCCC +
Preference number: 6 (lower is better)
Translates to: VVVVVRRRLARG*AVRGGAAKMSP
Trigger: GGGACTCATCTTTGCAGCACCACCCCGGACCGCCCACCCCCTAGCCAGGCGTCGTCGCACCACCACCACCAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS TCA 72 bp CCGCCCACCGCGGCCGGGGGTGCTAGCACCAGATGTTaGCAGCAAGGGGCTCCCATTCACGGAACCACTGCC +
Preference number: 6 (lower is better)
Translates to: PPTAAGGASTRC*QQGAPIHGTTA
Trigger: GGCAGTGGTTCCGTGAATGGGAGCCCCTTGCTGTCAACATCTGGTGCTAGCACCCCCGGCCGCGGTGGGCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS CCA 72 bp CAGCCAGTGCTCCTGACCGCCCCACAGGGATCTCTGTaGAGTGGCCACGCTCCAGGGGTGGCCTGGCCTCAT +
Preference number: 6 (lower is better)
Translates to: QPVLLTAPQGSL*SGHAPGVAWPH
Trigger: ATGAGGCCAGGCCACCCCTGGAGCGTGGCCACTCCACAGAGATCCCTGTGGGGCGGTCAGGAGCACTGGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS GCA 72 bp ATCCACTCCAGGTACCCGTTGAGCTCTCGCTCGATCTaGTGCTGCCGGCGCAGCTTCAGGAAGGCGCGGCGG +
Preference number: 6 (lower is better)
Translates to: IHSRYPLSSRSI*CCRRSFRKARR
Trigger: CCGCCGCGCCTTCCTGAAGCTGCGCCGGCAGCAGCAGATCGAGCGAGAGCTCAACGGGTACCTGGAGTGGAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS TCA 72 bp AGCGGCCCGAGTTGGTGGCCACAGCCTCCTCGAAAGTaGGAGTGTCCTCAGGCAGGGCGTGGACAGAGGCCT +
Preference number: 6 (lower is better)
Translates to: SGPSWWPQPPRK*ECPQAGRGQRP
Trigger: AGGCCTCTGTCCACGCCCTGCCTGAGGACACTCTCACTTTCGAGGAGGCTGTGGCCACCAACTCGGGCCGCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS TCA 72 bp AGGGAGGCTGGTCTGAGCCCCGGCGAAGTGGATGGGTaGGGAGTTGGCCGTCTTGTAGGTGATGCTGGGGCG +
Preference number: 6 (lower is better)
Translates to: REAGLSPGEVDG*GVGRLVGDAGA
Trigger: CGCCCCAGCATCACCTACAAGACGGCCAACTCCTCACCCATCCACTTCGCCGGGGCTCAGACCAGCCTCCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS CCA 72 bp GGATCTCTGTGGAGTGGCCACGCTCCAGGGGTGGCCTaGCCTCATGGGGTGCATCCTGGGTCCTTTGAGTGC +
Preference number: 6 (lower is better)
Translates to: GSLWSGHAPGVA*PHGVHPGSFEC
Trigger: GCACTCAAAGGACCCAGGATGCACCCCATGAGGCCAGGCCACCCCTGGAGCGTGGCCACTCCACAGAGATCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS CCA 72 bp CACAGGGATCTCTGTGGAGTGGCCACGCTCCAGGGGTaGCCTGGCCTCATGGGGTGCATCCTGGGTCCTTTG +
Preference number: 6 (lower is better)
Translates to: HRDLCGVATLQG*PGLMGCILGPL
Trigger: CAAAGGACCCAGGATGCACCCCATGAGGCCAGGCCACCCCTGGAGCGTGGCCACTCCACAGAGATCCCTGTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS CCA 72 bp GAGACTGGGAGGTCAGGGAGGACACGTAGGAAGTCCTaGAGGAGCGGCCCGAGTTGGTGGCCACAGCCTCCT +
Preference number: 6 (lower is better)
Translates to: ETGRSGRTRRKS*RSGPSWWPQPP
Trigger: AGGAGGCTGTGGCCACCAACTCGGGCCGCTCCTCCAGGACTTCCTACGTGTCCTCCCTGACCTCCCAGTCTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS GCA 72 bp GGCGCGGGCGAAGGGGGATCCAACAGCACAGAGATCTaGAAACCGGTCCTCTCCCTCCTCTGCGTGGATCAG +
Preference number: 6 (lower is better)
Translates to: GAGEGGSNSTEI*KPVLSLLCVDQ
Trigger: CTGATCCACGCAGAGGAGGGAGAGGACCGGTTTGCAGATCTCTGTGCTGTTGGATCCCCCTTCGCCCGCGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS TCA 72 bp TCCGGAAGTATGACGAGCTCTCTGTCTTCCCGCTCTTaGGGCTGGCGCGGGCGAAGGGGGATCCAACAGCAC +
Preference number: 6 (lower is better)
Translates to: SGSMTSSLSSRS*GWRGRRGIQQH
Trigger: GTGCTGTTGGATCCCCCTTCGCCCGCGCCAGCCTCAAGAGCGGGAAGACAGAGAGCTCGTCATACTTCCGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS GCA 72 bp CTGCTTTGTCCCAGCTGGGGCCAGCTTGATCTCCAGTaGCGTCCGGATGAGGGCCATCAGCGTGGACGTGAA +
Preference number: 6 (lower is better)
Translates to: LLCPSWGQLDLQ*RPDEGHQRGRE
Trigger: TTCACGTCCACGCTGATGGCCCTCATCCGGACGGCACTGGAGATCAAGCTGGCCCCAGCTGGGACAAAGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS CCA 72 bp CACAGTCACAGTCCCACTGGTCTCCAGGTCACAGTGTaGCTCCCGGGGCTGGTGGTTCCGGAGCTCCTTTTC +
Preference number: 6 (lower is better)
Translates to: HSHSPTGLQVTV*LPGLVVPELLF
Trigger: GAAAAGGAGCTCCGGAACCACCAGCCCCGGGAGCCACACTGTGACCTGGAGACCAGTGGGACTGTGACTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS CCA 72 bp GGCTTTCCAGGTCCACGTTACCACTGGGAACGACCGTaGCTTCCCCAAGAGGGCCCGTCAGCATCACTGGGA +
Preference number: 6 (lower is better)
Translates to: GFPGPRYHWERP*LPQEGPSASLG
Trigger: TCCCAGTGATGCTGACGGGCCCTCTTGGGGAAGCCACGGTCGTTCCCAGTGGTAACGTGGACCTGGAAAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS CAA 72 bp CTCCGGAAGTATGACGAGCTCTCTGTCTTCCCGCTCTaGAGGCTGGCGCGGGCGAAGGGGGATCCAACAGCA +
Preference number: 6 (lower is better)
Translates to: LRKYDELSVFPL*RLARAKGDPTA
Trigger: TGCTGTTGGATCCCCCTTCGCCCGCGCCAGCCTCAAGAGCGGGAAGACAGAGAGCTCGTCATACTTCCGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS CAA 72 bp GGCTCCCGGGGCTGGTGGTTCCGGAGCTCCTTTTCCTaGTCGGCTTCCACTATCTCAGCCTCCTTCTCCGTG +
Preference number: 6 (lower is better)
Translates to: GSRGWWFRSSFS*SASTISASFSV
Trigger: CACGGAGAAGGAGGCTGAGATAGTGGAAGCCGACAAGGAAAAGGAGCTCCGGAACCACCAGCCCCGGGAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS CAA 90 bp TCACAGTGTGGCTCCCGGGGCTGGTGGTTCCGGAGCTCCTTTTCCTaGTCGGCTTCCACTATCTCAGCCTCCTTCTCCGTGGCCTCCTTC +
Preference number: 6 (lower is better)
Translates to: SQCGSRGWWFRSSFS*SASTISASFSVASF
Trigger: GAAGGAGGCCACGGAGAAGGAGGCTGAGATAGTGGAAGCCGACAAGGAAAAGGAGCTCCGGAACCACCAGCCCCGGGAGCCACACTGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS CCA 72 bp CCACACTCGGTGGCATTGGCCTGCTCATCACAGGCCTaGTTGCTCAGGCAGGACAGCATGATCTCGTGCCAG +
Preference number: 6 (lower is better)
Translates to: PHSVALACSSQA*LLRQDSMISCQ
Trigger: CTGGCACGAGATCATGCTGTCCTGCCTGAGCAACCAGGCCTGTGATGAGCAGGCCAATGCCACCGAGTGTGG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
ENST00000413253.1
CDS CCA 72 bp GACCGTGGCTTCCCCAAGAGGGCCCGTCAGCATCACTaGGATATGTACAATAGTGTTCGGGTCTGGGGGCTG +
Preference number: 6 (lower is better)
Translates to: DRGFPKRARQHH*DMYNSVRVWGL
Trigger: CAGCCCCCAGACCCGAACACTATTGTACATATCCCAGTGATGCTGACGGGCCCTCTTGGGGAAGCCACGGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS CAA 90 bp TTCTCCTTCCTCCGGAAGTATGACGAGCTCTCTGTCTTCCCGCTCTaGAGGCTGGCGCGGGCGAAGGGGGATCCAACAGCACAGAGATCT +
Preference number: 6 (lower is better)
Translates to: FSFLRKYDELSVFPL*RLARAKGDPTAQRS
Trigger: AGATCTCTGTGCTGTTGGATCCCCCTTCGCCCGCGCCAGCCTCAAGAGCGGGAAGACAGAGAGCTCGTCATACTTCCGGAGGAAGGAGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS CAA 90 bp GCTCCTCATCACGTCATCCGCTTCCACCTCCTTCTTCCCCTCTGCTaGGCTTTCCAGGTCCACGTTACCACTGGGAACGACCGTGGCTTC +
Preference number: 6 (lower is better)
Translates to: APHHVIRFHLLLPLC*AFQVHVTTGNDRGF
Trigger: GAAGCCACGGTCGTTCCCAGTGGTAACGTGGACCTGGAAAGCCAAGCAGAGGGGAAGAAGGAGGTGGAAGCGGATGACGTGATGAGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS GCA 72 bp CGCTCTCTTCAGCACGTCCAAAGGGGACTTCTCCTCTaGATTCCTGTCCTCCTCGGCCAGCATGACTTCCTC +
Preference number: 6 (lower is better)
Translates to: RSLQHVQRGLLL*IPVLLGQHDFL
Trigger: GAGGAAGTCATGCTGGCCGAGGAGGACAGGAATGCAGAGGAGAAGTCCCCTTTGGACGTGCTGAAGAGAGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371363.5
ENST00000371372.6
CDS CCA 72 bp CATGCGAGTGACGTTCCGCTGATTGTCTGCATCCTCTaGCTGTTCCTCCACCTTCTGGAGACAGGTGCTGGG +
Preference number: 6 (lower is better)
Translates to: HASDVPLIVCIL*LFLHLLETGAG
Trigger: CCCAGCACCTGTCTCCAGAAGGTGGAGGAACAGCCAGAGGATGCAGACAATCAGCGGAACGTCACTCGCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS CAA 72 bp CACGTCATCCGCTTCCACCTCCTTCTTCCCCTCTGCTaGGCTTTCCAGGTCCACGTTACCACTGGGAACGAC +
Preference number: 6 (lower is better)
Translates to: HVIRFHLLLPLC*AFQVHVTTGND
Trigger: GTCGTTCCCAGTGGTAACGTGGACCTGGAAAGCCAAGCAGAGGGGAAGAAGGAGGTGGAAGCGGATGACGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS CAA 72 bp CCCTCCTCTGCGTGGATCAGGTCATTTCTGCTCTTCTaGGTGGCCGCTCTCTTCAGCACTGCGTCCAAAGGG +
Preference number: 6 (lower is better)
Translates to: PSSAWIRSFLLF*VAALFSTASKG
Trigger: CCCTTTGGACGCAGTGCTGAAGAGAGCGGCCACCAAGAAGAGCAGAAATGACCTGATCCACGCAGAGGAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371355.8
ENST00000371357.5
CDS GCA 72 bp CATCACGTCATCCGCTTCCACCTCCTTCTTCCCCTCTaGTTGGCTTTCCAGGTCCACGTTACCACTGGGAAC +
Preference number: 6 (lower is better)
Translates to: HHVIRFHLLLPL*LAFQVHVTTGN
Trigger: GTTCCCAGTGGTAACGTGGACCTGGAAAGCCAAGCAGAGGGGAAGAAGGAGGTGGAAGCGGATGACGTGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS GCA 72 bp TCTCTTCAGCACTGCGTCCAAAGGGGACTTCTCCTCTaGATTCCTGTCCTCCTCGGCCAGCATGACTTCCTC +
Preference number: 6 (lower is better)
Translates to: SLQHCVQRGLLL*IPVLLGQHDFL
Trigger: GAGGAAGTCATGCTGGCCGAGGAGGACAGGAATGCAGAGGAGAAGTCCCCTTTGGACGCAGTGCTGAAGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371355.8
ENST00000371357.5
CDS GCA 72 bp GAACAGTCATGTCCTCGTTGGAGATGGGCATGTTCATaGGAACCAGGCGCTTGTAGGCCAACCTACGAGGGC +
Preference number: 6 (lower is better)
Translates to: EQSCPRWRWACS*EPGACRPTYEG
Trigger: GCCCTCGTAGGTTGGCCTACAAGCGCCTGGTTCGCATGAACATGCCCATCTCCAACGAGGACATGACTGTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413253.1
CDS CCA 72 bp CAGAGATCTGCAAACCGGTCCTCTCCCTCCTCTGCGTaGATCAGGTCATTTCTGCTCTTCTTGGTGGCCGCT +
Preference number: 6 (lower is better)
Translates to: QRSANRSSPSSA*IRSFLLFLVAA
Trigger: AGCGGCCACCAAGAAGAGCAGAAATGACCTGATCCACGCAGAGGAGGGAGAGGACCGGTTTGCAGATCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS CCA 72 bp CAGCATCACTGGGATATGTACAATAGTGTTCGGGTCTaGGGGCTGACTGCCCATGCGAGTGACGTTCCGCTG +
Preference number: 6 (lower is better)
Translates to: QHHWDMYNSVRV*GLTAHASDVPL
Trigger: CAGCGGAACGTCACTCGCATGGGCAGTCAGCCCCCAGACCCGAACACTATTGTACATATCCCAGTGATGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS CCA 72 bp AGAAGTAGGCAAAGTCACTTCCACACTCGGTGGCATTaGCCTGCTCATCACAGGCCTGGTTGCTCAGGCAGG +
Preference number: 6 (lower is better)
Translates to: RSRQSHFHTRWH*PAHHRPGCSGR
Trigger: CCTGCCTGAGCAACCAGGCCTGTGATGAGCAGGCCAATGCCACCGAGTGTGGAAGTGACTTTGCCTACTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
ENST00000413253.1
CDS CAA 90 bp GGCTTATGGGGTGGTACCAGCAAGTCCAAAGTCTTCTGGGGCAGATaGGCCCACACAACGGAAATCTCCTTCCTCAACTCCGCGTCACAC +
Preference number: 6 (lower is better)
Translates to: GLWGGTSKSKVFWGR*AHTTEISFLNSASH
Trigger: GTGTGACGCGGAGTTGAGGAAGGAGATTTCCGTTGTGTGGGCCAATCTGCCCCAGAAGACTTTGGACTTGCTGGTACCACCCCATAAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS GCA 72 bp GAACAGTCATGTCCTCGTTGGAGATGGGCATGTTCATaGGAACCAGGCGCTTGTAAGCAACTCGAGCAGGGC +
Preference number: 6 (lower is better)
Translates to: EQSCPRWRWACS*EPGACKQLEQG
Trigger: GCCCTGCTCGAGTTGCTTACAAGCGCCTGGTTCGCATGAACATGCCCATCTCCAACGAGGACATGACTGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS CCA 72 bp CGAAGTAGAAGTAGGCAAAGTCACTTCCACACTCGGTaGCATTGGCCTGCTCATCACAGGCCTGGTTGCTCA +
Preference number: 6 (lower is better)
Translates to: RSRSRQSHFHTR*HWPAHHRPGCS
Trigger: TGAGCAACCAGGCCTGTGATGAGCAGGCCAATGCCACCGAGTGTGGAAGTGACTTTGCCTACTTCTACTTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
ENST00000413253.1
CDS CCA 72 bp GGCTTATGGGGTGGTACCAGCAAGTCCAAAGTCTTCTaGGGCAGATTGGCCCACACAACGGAAATCTCCTTC +
Preference number: 6 (lower is better)
Translates to: GLWGGTSKSKVF*GRLAHTTEISF
Trigger: GAAGGAGATTTCCGTTGTGTGGGCCAATCTGCCCCAGAAGACTTTGGACTTGCTGGTACCACCCCATAAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS CAA 72 bp GGTGGTACCAGCAAGTCCAAAGTCTTCTGGGGCAGATaGGCCCACACAACGGAAATCTCCTTCCTCAACTCC +
Preference number: 6 (lower is better)
Translates to: GGTSKSKVFWGR*AHTTEISFLNS
Trigger: GGAGTTGAGGAAGGAGATTTCCGTTGTGTGGGCCAATCTGCCCCAGAAGACTTTGGACTTGCTGGTACCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS CAA 90 bp GCGCTCCTGAACAGCAGCATCAGGGCTTGCAAAAACGTCCGGAAGTaGTTGTGGCGGTTGATGCTGGTGTCATCATCCAGGGCAATATTC +
Preference number: 6 (lower is better)
Translates to: ALLNSSIRACKNVRK*LWRLMLVSSSRAIF
Trigger: GAATATTGCCCTGGATGATGACACCAGCATCAACCGCCACAACAACTTCCGGACGTTTTTGCAAGCCCTGATGCTGCTGTTCAGGAGCGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS CAA 72 bp AACAGCAGCATCAGGGCTTGCAAAAACGTCCGGAAGTaGTTGTGGCGGTTGATGCTGGTGTCATCATCCAGG +
Preference number: 6 (lower is better)
Translates to: NSSIRACKNVRK*LWRLMLVSSSR
Trigger: CCTGGATGATGACACCAGCATCAACCGCCACAACAACTTCCGGACGTTTTTGCAAGCCCTGATGCTGCTGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS CAA 72 bp GTAAAAGGACGAGAACATGCCTTTGCTGACGCCGCCTaGCGATTCGATCCCGTGATACATCACTGCATTCCA +
Preference number: 6 (lower is better)
Translates to: VKGREHAFADAA*RFDPVIHHCIP
Trigger: TGGAATGCAGTGATGTATCACGGGATCGAATCGCAAGGCGGCGTCAGCAAAGGCATGTTCTCGTCCTTTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS GCA 72 bp GTTCAGGCATTTCAGCATCAGCTCGTACTCATAGGGTaGATCATAGAACTTCATCATCAGCACCACAGTGTT +
Preference number: 6 (lower is better)
Translates to: VQAFQHQLVLIG*IIELHHQHHSV
Trigger: AACACTGTGGTGCTGATGATGAAGTTCTATGATGCACCCTATGAGTACGAGCTGATGCTGAAATGCCTGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6
CDS GCA 72 bp TTTGTTCTGCTTGTAGAAGTCGAATATCATCAGAGCTaGATAAACCTTCCCCACTGTCATCTCATCAGGCTT +
Preference number: 6 (lower is better)
Translates to: FVLLVEVEYHQS*INLPHCHLIRL
Trigger: AAGCCTGATGAGATGACAGTGGGGAAGGTTTATGCAGCTCTGATGATATTCGACTTCTACAAGCAGAACAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277549.9
ENST00000277551.6
ENST00000371355.8
ENST00000371357.5
ENST00000371363.5
ENST00000371372.6