RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CACHD1 (Homo sapiens)

Ensembl gene IDs: ENSG00000158966

Ensembl transcript IDs: ENST00000290039.6, ENST00000470527.1, ENST00000486580.1, ENST00000495994.5, ENST00000650260.1, ENST00000651257.2

Found 680 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GAATGCTTCTGGCTCTTTGGAACATTCCTCTGGCTCAGCTTCACTTaGAGGTTCCGTCTCTGTGTTTGGAGGTTCGCCTTCTGTTACCTT +
Preference number: 1 (lower is better)
Translates to: ECFWLFGTFLWLSFT*RFRLCVWRFAFCYL
Trigger: AAGGTAACAGAAGGCGAACCTCCAAACACAGAGACGGAACCTGCAAGTGAAGCTGAGCCAGAGGAATGTTCCAAAGAGCCAGAAGCATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
3UTR TCA 90 bp AGTCTCTGGGTGAGCAGATTTTTCTCTCTTCCAGTTAAGGAGAGCTaGATGCTTCTGGCTCTTTGGAACATTCCTCTGGCTCAGCTTCAC +
Preference number: 1 (lower is better)
Translates to: SLWVSRFFSLPVKES*MLLALWNIPLAQLH
Trigger: GTGAAGCTGAGCCAGAGGAATGTTCCAAAGAGCCAGAAGCATTCAGCTCTCCTTAACTGGAAGAGAGAAAAATCTGCTCACCCAGAGACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
3UTR TCA 90 bp AATGCACACATTTGTATCTGCATGTGCCACATTCCAGTCTCTGGGTaGGCAGATTTTTCTCTCTTCCAGTTAAGGAGAGCTGAATGCTTC +
Preference number: 1 (lower is better)
Translates to: NAHICICMCHIPVSG*ADFSLFQLRRAECF
Trigger: GAAGCATTCAGCTCTCCTTAACTGGAAGAGAGAAAAATCTGCTCACCCAGAGACTGGAATGTGGCACATGCAGATACAAATGTGTGCATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
3UTR CCA 90 bp GAGATGCATCGTTTAGAGCATAACATGAGTTCCATACAGCAACTGTaGTATCCAGGTACCGCTAAGAAACAAAGCGAAATCTTCAATGCA +
Preference number: 1 (lower is better)
Translates to: EMHRLEHNMSSIQQL*YPGTAKKQSEIFNA
Trigger: TGCATTGAAGATTTCGCTTTGTTTCTTAGCGGTACCTGGATACCACAGTTGCTGTATGGAACTCATGTTATGCTCTAAACGATGCATCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
3UTR-3UTR TCA 90 bp CTCTGCCCCTCCCCATCTCTGTCAAACACAGAGAAAGAATACTGCATTACAAACCCAGTTAAGGAGAGCTaGATGCTTCTGGCTCTTTGG +
Preference number: 2 (lower is better)
Translates to: LCPSPSLSNTEKEYCITNPVKES*MLLALW
Trigger: CCAAAGAGCCAGAAGCATTCAGCTCTCCTTAACTGG...GTTTGTAATGCAGTATTCTTTCTCTGTGTTTGACAGAGATGGGGAGGGGCAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
3UTR-3UTR GCA 90 bp CTCTGCCCCTCCCCATCTCTGTCAAACACAGAGAAAGAATACTGCATTACAAACTGGCTCAGCTTCACTTaGAGGTTCCGTCTCTGTGTT +
Preference number: 2 (lower is better)
Translates to: LCPSPSLSNTEKEYCITNWLSFT*RFRLCV
Trigger: AACACAGAGACGGAACCTGCAAGTGAAGCTGAGCCA...GTTTGTAATGCAGTATTCTTTCTCTGTGTTTGACAGAGATGGGGAGGGGCAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
3UTR-3UTR GCA 90 bp CCTCTGCCCCTCCCCATCTCTGTCAAACACAGAGAAAGAATACTGCATTACAAATGGCTCAGCTTCACTTaGAGGTTCCGTCTCTGTGTT +
Preference number: 2 (lower is better)
Translates to: PLPLPISVKHRERILHYKWLSFT*RFRLCV
Trigger: AACACAGAGACGGAACCTGCAAGTGAAGCTGAGCCA...TTTGTAATGCAGTATTCTTTCTCTGTGTTTGACAGAGATGGGGAGGGGCAGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
3UTR-3UTR CCA 90 bp CCTCTGCCCCTCCCCATCTCTGTCAAACACAGAGAAAGAATACTGCATTACAAATTCCGTCTCTGTGTTTaGAGGTTCGCCTTCTGTTAC +
Preference number: 2 (lower is better)
Translates to: PLPLPISVKHRERILHYKFRLCV*RFAFCY
Trigger: GTAACAGAAGGCGAACCTCCAAACACAGAGACGGAA...TTTGTAATGCAGTATTCTTTCTCTGTGTTTGACAGAGATGGGGAGGGGCAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
3UTR-3UTR CCA 90 bp CTCTGCCCCTCCCCATCTCTGTCAAACACAGAGAAAGAATACTGCATTACAAACTCCATACAGCAACTGTaGTATCCAGGTACCGCTAAG +
Preference number: 2 (lower is better)
Translates to: LCPSPSLSNTEKEYCITNSIQQL*YPGTAK
Trigger: CTTAGCGGTACCTGGATACCACAGTTGCTGTATGGA...GTTTGTAATGCAGTATTCTTTCTCTGTGTTTGACAGAGATGGGGAGGGGCAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
3UTR-3UTR CCA 90 bp CCTCTGCCCCTCCCCATCTCTGTCAAACACAGAGAAAGAATACTGCATTACAAATCCATACAGCAACTGTaGTATCCAGGTACCGCTAAG +
Preference number: 2 (lower is better)
Translates to: PLPLPISVKHRERILHYKSIQQL*YPGTAK
Trigger: CTTAGCGGTACCTGGATACCACAGTTGCTGTATGGA...TTTGTAATGCAGTATTCTTTCTCTGTGTTTGACAGAGATGGGGAGGGGCAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
3UTR-3UTR CCA 90 bp CTGTTACCTTCCATTAGTGTTATGGCAGGTCTGTTCATCAGGCTTATTTCCCCTGGAGGTCTCTTGCTGTaGGTTTTAAGCCGGTTCTTT +
Preference number: 2 (lower is better)
Translates to: LLPSISVMAGLFIRLISPGGLLL*VLSRFF
Trigger: AAAGAACCGGCTTAAAACCCACAGCAAGAGACCTCC...AGGGGAAATAAGCCTGATGAACAGACCTGCCATAACACTAATGGAAGGTAACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
3UTR-3UTR CCA 90 bp CATCGTTTAGAGCATAACATGAGTTCCATACAGCAACTGTGGTATCCAGGTACCATGCTTCTGGCTCTTTaGAACATTCCTCTGGCTCAG +
Preference number: 2 (lower is better)
Translates to: HRLEHNMSSIQQLWYPGTMLLAL*NIPLAQ
Trigger: CTGAGCCAGAGGAATGTTCCAAAGAGCCAGAAGCAT...GGTACCTGGATACCACAGTTGCTGTATGGAACTCATGTTATGCTCTAAACGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
3UTR-3UTR GCA 90 bp CCTCTGCCCCTCCCCATCTCTGTCAAACACAGAGAAAGAATACTGCATTACAAATTAAGGAGAGCTGAATaGTTCTGGCTCTTTGGAACA +
Preference number: 2 (lower is better)
Translates to: PLPLPISVKHRERILHYKLRRAE*FWLFGT
Trigger: TGTTCCAAAGAGCCAGAAGCATTCAGCTCTCCTTAA...TTTGTAATGCAGTATTCTTTCTCTGTGTTTGACAGAGATGGGGAGGGGCAGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
3UTR-3UTR TCA 90 bp TTGGTGGATAATGTCTTGGCTAACTGGCAGCAGCTTTTAACCGTGATATTAAAACCAGTTAAGGAGAGCTaGATGCTTCTGGCTCTTTGG +
Preference number: 2 (lower is better)
Translates to: LVDNVLANWQQLLTVILKPVKES*MLLALW
Trigger: CCAAAGAGCCAGAAGCATTCAGCTCTCCTTAACTGG...TTTTAATATCACGGTTAAAAGCTGCTGCCAGTTAGCCAAGACATTATCCACCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
3UTR-3UTR TCA 90 bp AACATTAGGTTTCGTAGAAACCTAAGAATAGCATTGTACGAGGAGTGGAAACAAGCTCGGGGCAACTGCTaGAAACTTCTCCTGTGTTTC +
Preference number: 2 (lower is better)
Translates to: NIRFRRNLRIALYEEWKQARGNC*KLLLCF
Trigger: GAAACACAGGAGAAGTTTTCAGCAGTTGCCCCGAGC...TTGTTTCCACTCCTCGTACAATGCTATTCTTAGGTTTCTACGAAACCTAATGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
3UTR-3UTR CCA 90 bp GCTAAGAAACAAAGCGAAATCTTCAATGCACACATTTGTATCTGCATGTGCCACGGAGGTCTCTTGCTGTaGGTTTTAAGCCGGTTCTTT +
Preference number: 2 (lower is better)
Translates to: AKKQSEIFNAHICICMCHGGLLL*VLSRFF
Trigger: AAAGAACCGGCTTAAAACCCACAGCAAGAGACCTCC...GTGGCACATGCAGATACAAATGTGTGCATTGAAGATTTCGCTTTGTTTCTTAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
3UTR-3UTR CCA 90 bp AACATTAGGTTTCGTAGAAACCTAAGAATAGCATTGTACGAGGAGTGGAAACAATCCCAGATCTCATCTTaGCGTGGAGGTGAGGAGATT +
Preference number: 2 (lower is better)
Translates to: NIRFRRNLRIALYEEWKQSQISS*RGGEEI
Trigger: AATCTCCTCACCTCCACGCCAAGATGAGATCTGGGA...TTGTTTCCACTCCTCGTACAATGCTATTCTTAGGTTTCTACGAAACCTAATGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
3UTR-3UTR CCA 90 bp ACATATAAACGGAGATTTACCACACACATTCTTTACCATGGTGCAAGAATGCCTGGAGGTCTCTTGCTGTaGGTTTTAAGCCGGTTCTTT +
Preference number: 2 (lower is better)
Translates to: TYKRRFTTHILYHGARMPGGLLL*VLSRFF
Trigger: AAAGAACCGGCTTAAAACCCACAGCAAGAGACCTCC...AGGCATTCTTGCACCATGGTAAAGAATGTGTGTGGTAAATCTCCGTTTATATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
3UTR-3UTR CCA 90 bp ACATATAAACGGAGATTTACCACACACATTCTTTACCATGGTGCAAGAATGCCTTTTGGAACATTCCTCTaGCTCAGCTTCACTTGCAGG +
Preference number: 2 (lower is better)
Translates to: TYKRRFTTHILYHGARMPFGTFL*LSFTCR
Trigger: CCTGCAAGTGAAGCTGAGCCAGAGGAATGTTCCAAA...AGGCATTCTTGCACCATGGTAAAGAATGTGTGTGGTAAATCTCCGTTTATATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
3UTR-3UTR CCA 90 bp TTGGTGGATAATGTCTTGGCTAACTGGCAGCAGCTTTTAACCGTGATATTAAAAATGCTTCTGGCTCTTTaGAACATTCCTCTGGCTCAG +
Preference number: 2 (lower is better)
Translates to: LVDNVLANWQQLLTVILKMLLAL*NIPLAQ
Trigger: CTGAGCCAGAGGAATGTTCCAAAGAGCCAGAAGCAT...TTTTAATATCACGGTTAAAAGCTGCTGCCAGTTAGCCAAGACATTATCCACCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
3UTR-3UTR CCA 90 bp GCTAAGAAACAAAGCGAAATCTTCAATGCACACATTTGTATCTGCATGTGCCACAGAGCTGAATGCTTCTaGCTCTTTGGAACATTCCTC +
Preference number: 2 (lower is better)
Translates to: AKKQSEIFNAHICICMCHRAECF*LFGTFL
Trigger: GAGGAATGTTCCAAAGAGCCAGAAGCATTCAGCTCT...GTGGCACATGCAGATACAAATGTGTGCATTGAAGATTTCGCTTTGTTTCTTAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
3UTR-3UTR TCA 90 bp CATCGTTTAGAGCATAACATGAGTTCCATACAGCAACTGTGGTATCCAGGTACCACATCTTCACAAATGTaGCTGTGTTGTTGTTTCTCT +
Preference number: 2 (lower is better)
Translates to: HRLEHNMSSIQQLWYPGTTSSQM*LCCCFS
Trigger: AGAGAAACAACAACACAGTCACATTTGTGAAGATGT...GGTACCTGGATACCACAGTTGCTGTATGGAACTCATGTTATGCTCTAAACGATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
3UTR-3UTR CCA 90 bp TTCCAACTACATATAAACGGAGATTTACCACACACATTCTTTACCATGGTGCAATTCCGTCTCTGTGTTTaGAGGTTCGCCTTCTGTTAC +
Preference number: 2 (lower is better)
Translates to: FQLHINGDLPHTFFTMVQFRLCV*RFAFCY
Trigger: GTAACAGAAGGCGAACCTCCAAACACAGAGACGGAA...TTGCACCATGGTAAAGAATGTGTGTGGTAAATCTCCGTTTATATGTAGTTGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
3UTR-3UTR CCA 90 bp AACATTAGGTTTCGTAGAAACCTAAGAATAGCATTGTACGAGGAGTGGAAACAATTTGGAACATTCCTCTaGCTCAGCTTCACTTGCAGG +
Preference number: 2 (lower is better)
Translates to: NIRFRRNLRIALYEEWKQFGTFL*LSFTCR
Trigger: CCTGCAAGTGAAGCTGAGCCAGAGGAATGTTCCAAA...TTGTTTCCACTCCTCGTACAATGCTATTCTTAGGTTTCTACGAAACCTAATGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
3UTR-3UTR CCA 90 bp ACATATAAACGGAGATTTACCACACACATTCTTTACCATGGTGCAAGAATGCCTCCACATTCCAGTCTCTaGGTGAGCAGATTTTTCTCT +
Preference number: 2 (lower is better)
Translates to: TYKRRFTTHILYHGARMPPHSSL*VSRFFS
Trigger: AGAGAAAAATCTGCTCACCCAGAGACTGGAATGTGG...AGGCATTCTTGCACCATGGTAAAGAATGTGTGTGGTAAATCTCCGTTTATATGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
3UTR-3UTR CCA 90 bp ACATATAAACGGAGATTTACCACACACATTCTTTACCATGGTGCAAGAATGCCTTCCTATTTTGTGGAGTaGGGCAGTGGGATATCAGTT +
Preference number: 2 (lower is better)
Translates to: TYKRRFTTHILYHGARMPSYFVE*GSGISV
Trigger: AACTGATATCCCACTGCCCCACTCCACAAAATAGGA...AGGCATTCTTGCACCATGGTAAAGAATGTGTGTGGTAAATCTCCGTTTATATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
3UTR-3UTR GCA 90 bp ACATATAAACGGAGATTTACCACACACATTCTTTACCATGGTGCAAGAATGCCTTTAAGGAGAGCTGAATaGTTCTGGCTCTTTGGAACA +
Preference number: 2 (lower is better)
Translates to: TYKRRFTTHILYHGARMPLRRAE*FWLFGT
Trigger: TGTTCCAAAGAGCCAGAAGCATTCAGCTCTCCTTAA...AGGCATTCTTGCACCATGGTAAAGAATGTGTGTGGTAAATCTCCGTTTATATGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
3UTR-3UTR GCA 90 bp CATCGTTTAGAGCATAACATGAGTTCCATACAGCAACTGTGGTATCCAGGTACCAAGCGAAATCTTCAATaGACACATTTGTATCTGCAT +
Preference number: 2 (lower is better)
Translates to: HRLEHNMSSIQQLWYPGTKRNLQ*THLYLH
Trigger: ATGCAGATACAAATGTGTGCATTGAAGATTTCGCTT...GGTACCTGGATACCACAGTTGCTGTATGGAACTCATGTTATGCTCTAAACGATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
3UTR-3UTR CCA 90 bp AACATTAGGTTTCGTAGAAACCTAAGAATAGCATTGTACGAGGAGTGGAAACAACTTCCATTAGTGTTATaGCAGGTCTGTTCATCAGGC +
Preference number: 2 (lower is better)
Translates to: NIRFRRNLRIALYEEWKQLPLVL*QVCSSG
Trigger: GCCTGATGAACAGACCTGCCATAACACTAATGGAAG...TTGTTTCCACTCCTCGTACAATGCTATTCTTAGGTTTCTACGAAACCTAATGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
3UTR-3UTR CCA 90 bp AACATTAGGTTTCGTAGAAACCTAAGAATAGCATTGTACGAGGAGTGGAAACAAAGAGCTGAATGCTTCTaGCTCTTTGGAACATTCCTC +
Preference number: 2 (lower is better)
Translates to: NIRFRRNLRIALYEEWKQRAECF*LFGTFL
Trigger: GAGGAATGTTCCAAAGAGCCAGAAGCATTCAGCTCT...TTGTTTCCACTCCTCGTACAATGCTATTCTTAGGTTTCTACGAAACCTAATGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
3UTR-3UTR CCA 90 bp AACATTAGGTTTCGTAGAAACCTAAGAATAGCATTGTACGAGGAGTGGAAACAACCACATTCCAGTCTCTaGGTGAGCAGATTTTTCTCT +
Preference number: 2 (lower is better)
Translates to: NIRFRRNLRIALYEEWKQPHSSL*VSRFFS
Trigger: AGAGAAAAATCTGCTCACCCAGAGACTGGAATGTGG...TTGTTTCCACTCCTCGTACAATGCTATTCTTAGGTTTCTACGAAACCTAATGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
3UTR-3UTR CCA 90 bp TTCCAACTACATATAAACGGAGATTTACCACACACATTCTTTACCATGGTGCAATGGTGGATAATGTCTTaGCTAACTGGCAGCAGCTTT +
Preference number: 2 (lower is better)
Translates to: FQLHINGDLPHTFFTMVQWWIMS*LTGSSF
Trigger: AAAGCTGCTGCCAGTTAGCCAAGACATTATCCACCA...TTGCACCATGGTAAAGAATGTGTGTGGTAAATCTCCGTTTATATGTAGTTGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
3UTR-3UTR GCA 90 bp TTCCAACTACATATAAACGGAGATTTACCACACACATTCTTTACCATGGTGCAATTAAGGAGAGCTGAATaGTTCTGGCTCTTTGGAACA +
Preference number: 2 (lower is better)
Translates to: FQLHINGDLPHTFFTMVQLRRAE*FWLFGT
Trigger: TGTTCCAAAGAGCCAGAAGCATTCAGCTCTCCTTAA...TTGCACCATGGTAAAGAATGTGTGTGGTAAATCTCCGTTTATATGTAGTTGGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
3UTR-3UTR TCA 90 bp TTGGTGGATAATGTCTTGGCTAACTGGCAGCAGCTTTTAACCGTGATATTAAAAACATCTTCACAAATGTaGCTGTGTTGTTGTTTCTCT +
Preference number: 2 (lower is better)
Translates to: LVDNVLANWQQLLTVILKTSSQM*LCCCFS
Trigger: AGAGAAACAACAACACAGTCACATTTGTGAAGATGT...TTTTAATATCACGGTTAAAAGCTGCTGCCAGTTAGCCAAGACATTATCCACCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
3UTR-3UTR TCA 90 bp TTCCAACTACATATAAACGGAGATTTACCACACACATTCTTTACCATGGTGCAAACATCTTCACAAATGTaGCTGTGTTGTTGTTTCTCT +
Preference number: 2 (lower is better)
Translates to: FQLHINGDLPHTFFTMVQTSSQM*LCCCFS
Trigger: AGAGAAACAACAACACAGTCACATTTGTGAAGATGT...TTGCACCATGGTAAAGAATGTGTGTGGTAAATCTCCGTTTATATGTAGTTGGAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
3UTR-3UTR GCA 90 bp TTGGTGGATAATGTCTTGGCTAACTGGCAGCAGCTTTTAACCGTGATATTAAAAAAGCGAAATCTTCAATaGACACATTTGTATCTGCAT +
Preference number: 2 (lower is better)
Translates to: LVDNVLANWQQLLTVILKKRNLQ*THLYLH
Trigger: ATGCAGATACAAATGTGTGCATTGAAGATTTCGCTT...TTTTAATATCACGGTTAAAAGCTGCTGCCAGTTAGCCAAGACATTATCCACCAA
37% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
3UTR-3UTR CCA 90 bp ACATATAAACGGAGATTTACCACACACATTCTTTACCATGGTGCAAGAATGCCTAATCACAAAGCAATTTaGTGGATAATGTCTTGGCTA +
Preference number: 2 (lower is better)
Translates to: TYKRRFTTHILYHGARMPNHKAI*WIMSWL
Trigger: TAGCCAAGACATTATCCACCAAATTGCTTTGTGATT...AGGCATTCTTGCACCATGGTAAAGAATGTGTGTGGTAAATCTCCGTTTATATGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
3UTR GCA 72 bp TGGCTCTTTGGAACATTCCTCTGGCTCAGCTTCACTTaGAGGTTCCGTCTCTGTGTTTGGAGGTTCGCCTTC +
Preference number: 3 (lower is better)
Translates to: WLFGTFLWLSFT*RFRLCVWRFAF
Trigger: GAAGGCGAACCTCCAAACACAGAGACGGAACCTGCAAGTGAAGCTGAGCCAGAGGAATGTTCCAAAGAGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
3UTR-3UTR CAA 90 bp CCTCTGCCCCTCCCCATCTCTGTCAAACACAGAGAAAGAATACTGCATTACAAACTGGCTCAGCTTCACTaGCAGGTTCCGTCTCTGTGT +
Preference number: 3 (lower is better)
Translates to: PLPLPISVKHRERILHYKLAQLH*QVPSLC
Trigger: ACACAGAGACGGAACCTGCAAGTGAAGCTGAGCCAG...TTTGTAATGCAGTATTCTTTCTCTGTGTTTGACAGAGATGGGGAGGGGCAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
3UTR-3UTR CAA 90 bp CTCTGCCCCTCCCCATCTCTGTCAAACACAGAGAAAGAATACTGCATTACAAACCTGGCTCAGCTTCACTaGCAGGTTCCGTCTCTGTGT +
Preference number: 3 (lower is better)
Translates to: LCPSPSLSNTEKEYCITNLAQLH*QVPSLC
Trigger: ACACAGAGACGGAACCTGCAAGTGAAGCTGAGCCAG...GTTTGTAATGCAGTATTCTTTCTCTGTGTTTGACAGAGATGGGGAGGGGCAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
3UTR-3UTR CAA 90 bp TGTGACTGTGTTGTTGTTTCTCTCGTTTTTAACCATGTCGACAGGCAGGAAATGCACAAGGGAGGTCTCTaGCTGTGGGTTTTAAGCCGG +
Preference number: 3 (lower is better)
Translates to: CDCVVVSLVFNHVDRQEMHKGGL*LWVLSR
Trigger: CCGGCTTAAAACCCACAGCAAGAGACCTCCCTTGTG...CATTTCCTGCCTGTCGACATGGTTAAAAACGAGAGAAACAACAACACAGTCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
3UTR CCA 72 bp TGGAGGTTCGCCTTCTGTTACCTTCCATTAGTGTTATaGCAGGTCTGTTCATCAGGCTTATTTCCCCTCCAT +
Preference number: 3 (lower is better)
Translates to: WRFAFCYLPLVL*QVCSSGLFPLH
Trigger: ATGGAGGGGAAATAAGCCTGATGAACAGACCTGCCATAACACTAATGGAAGGTAACAGAAGGCGAACCTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
3UTR-3UTR CAA 90 bp ACATATAAACGGAGATTTACCACACACATTCTTTACCATGGTGCAAGAATGCCTCACAAGGGAGGTCTCTaGCTGTGGGTTTTAAGCCGG +
Preference number: 3 (lower is better)
Translates to: TYKRRFTTHILYHGARMPHKGGL*LWVLSR
Trigger: CCGGCTTAAAACCCACAGCAAGAGACCTCCCTTGTG...AGGCATTCTTGCACCATGGTAAAGAATGTGTGTGGTAAATCTCCGTTTATATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
3UTR TCA 72 bp GTGAGCAGATTTTTCTCTCTTCCAGTTAAGGAGAGCTaGATGCTTCTGGCTCTTTGGAACATTCCTCTGGCT +
Preference number: 3 (lower is better)
Translates to: VSRFFSLPVKES*MLLALWNIPLA
Trigger: AGCCAGAGGAATGTTCCAAAGAGCCAGAAGCATTCAGCTCTCCTTAACTGGAAGAGAGAAAAATCTGCTCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
3UTR-3UTR CAA 90 bp TTCCAACTACATATAAACGGAGATTTACCACACACATTCTTTACCATGGTGCAACACAAGGGAGGTCTCTaGCTGTGGGTTTTAAGCCGG +
Preference number: 3 (lower is better)
Translates to: FQLHINGDLPHTFFTMVQHKGGL*LWVLSR
Trigger: CCGGCTTAAAACCCACAGCAAGAGACCTCCCTTGTG...TTGCACCATGGTAAAGAATGTGTGTGGTAAATCTCCGTTTATATGTAGTTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
3UTR-3UTR CAA 90 bp TTCCAACTACATATAAACGGAGATTTACCACACACATTCTTTACCATGGTGCAACTGGCTCAGCTTCACTaGCAGGTTCCGTCTCTGTGT +
Preference number: 3 (lower is better)
Translates to: FQLHINGDLPHTFFTMVQLAQLH*QVPSLC
Trigger: ACACAGAGACGGAACCTGCAAGTGAAGCTGAGCCAG...TTGCACCATGGTAAAGAATGTGTGTGGTAAATCTCCGTTTATATGTAGTTGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
3UTR-3UTR CAA 90 bp CCTCTGCCCCTCCCCATCTCTGTCAAACACAGAGAAAGAATACTGCATTACAAACTTCAATGCACACATTaGTATCTGCATGTGCCACAT +
Preference number: 3 (lower is better)
Translates to: PLPLPISVKHRERILHYKLQCTH*YLHVPH
Trigger: ATGTGGCACATGCAGATACAAATGTGTGCATTGAAG...TTTGTAATGCAGTATTCTTTCTCTGTGTTTGACAGAGATGGGGAGGGGCAGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
3UTR CCA 72 bp TGCACAAAGCACAAACACAAGGGAGGTCTCTTGCTGTaGGTTTTAAGCCGGTTCTTTTTCTTTCCAGAACAT +
Preference number: 3 (lower is better)
Translates to: CTKHKHKGGLLL*VLSRFFFFPEH
Trigger: ATGTTCTGGAAAGAAAAAGAACCGGCTTAAAACCCACAGCAAGAGACCTCCCTTGTGTTTGTGCTTTGTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
3UTR CCA 72 bp CGTTTAGAGCATAACATGAGTTCCATACAGCAACTGTaGTATCCAGGTACCGCTAAGAAACAAAGCGAAATC +
Preference number: 3 (lower is better)
Translates to: RLEHNMSSIQQL*YPGTAKKQSEI
Trigger: GATTTCGCTTTGTTTCTTAGCGGTACCTGGATACCACAGTTGCTGTATGGAACTCATGTTATGCTCTAAACG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
3UTR-3UTR CAA 90 bp CCTCTGCCCCTCCCCATCTCTGTCAAACACAGAGAAAGAATACTGCATTACAAAAATGTGACTGTGTTGTaGTTTCTCTCGTTTTTAACC +
Preference number: 3 (lower is better)
Translates to: PLPLPISVKHRERILHYKNVTVL*FLSFLT
Trigger: GGTTAAAAACGAGAGAAACAACAACACAGTCACATT...TTTGTAATGCAGTATTCTTTCTCTGTGTTTGACAGAGATGGGGAGGGGCAGAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
3UTR-3UTR CAA 90 bp ACATATAAACGGAGATTTACCACACACATTCTTTACCATGGTGCAAGAATGCCTAATGCTTCTGGCTCTTaGGAACATTCCTCTGGCTCA +
Preference number: 3 (lower is better)
Translates to: TYKRRFTTHILYHGARMPNASGS*EHSSGS
Trigger: TGAGCCAGAGGAATGTTCCAAAGAGCCAGAAGCATT...AGGCATTCTTGCACCATGGTAAAGAATGTGTGTGGTAAATCTCCGTTTATATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
3UTR-3UTR CAA 90 bp AACATTAGGTTTCGTAGAAACCTAAGAATAGCATTGTACGAGGAGTGGAAACAACTTCATTTTCCTATTTaGTGGAGTGGGGCAGTGGGA +
Preference number: 3 (lower is better)
Translates to: NIRFRRNLRIALYEEWKQLHFPI*WSGAVG
Trigger: TCCCACTGCCCCACTCCACAAAATAGGAAAATGAAG...TTGTTTCCACTCCTCGTACAATGCTATTCTTAGGTTTCTACGAAACCTAATGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
3UTR-3UTR CAA 90 bp GCTAAGAAACAAAGCGAAATCTTCAATGCACACATTTGTATCTGCATGTGCCACAATGTGACTGTGTTGTaGTTTCTCTCGTTTTTAACC +
Preference number: 3 (lower is better)
Translates to: AKKQSEIFNAHICICMCHNVTVL*FLSFLT
Trigger: GGTTAAAAACGAGAGAAACAACAACACAGTCACATT...GTGGCACATGCAGATACAAATGTGTGCATTGAAGATTTCGCTTTGTTTCTTAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
3UTR-3UTR CAA 90 bp TTGGTGGATAATGTCTTGGCTAACTGGCAGCAGCTTTTAACCGTGATATTAAAAAACCTAAGAATAGCATaGTACGAGGAGTGGAAACAA +
Preference number: 3 (lower is better)
Translates to: LVDNVLANWQQLLTVILKNLRIA*YEEWKQ
Trigger: TTGTTTCCACTCCTCGTACAATGCTATTCTTAGGTT...TTTTAATATCACGGTTAAAAGCTGCTGCCAGTTAGCCAAGACATTATCCACCAA
39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CCA 90 bp CCTCTGCCCCTCCCCATCTCTGTCAAACACAGAGAAAGAATACTGCATTACAAAGCCAGCCTCCGCATCTaGCTCGCCAGCACTTGCGCC +
Preference number: 4 (lower is better)
Translates to: PLPLPISVKHRERILHYKASLRI*LASTCA
Trigger: GGCGCAAGTGCTGGCGAGCCAGATGCGGAGGCTGGC...TTTGTAATGCAGTATTCTTTCTCTGTGTTTGACAGAGATGGGGAGGGGCAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290039.6
ENST00000651257.2
CDS-3UTR TCA 90 bp TTGCAGGTTCCGTCTCTGTGTTTGGAGGTTCGCCTTCTGTTACCTTCCATTAGTGTCCTTTGGGGTCGATaGGAGTCGGGTGCGCCACCA +
Preference number: 4 (lower is better)
Translates to: LQVPSLCLEVRLLLPSISVLWGR*ESGAPP
Trigger: TGGTGGCGCACCCGACTCTCATCGACCCCAAAGGAC...ACTAATGGAAGGTAACAGAAGGCGAACCTCCAAACACAGAGACGGAACCTGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR GCA 90 bp CCTCTGCCCCTCCCCATCTCTGTCAAACACAGAGAAAGAATACTGCATTACAAATGGCTCGCCAGCACTTaGGCCTCGTCCAGGATGGAG +
Preference number: 4 (lower is better)
Translates to: PLPLPISVKHRERILHYKWLAST*ASSRME
Trigger: CTCCATCCTGGACGAGGCGCAAGTGCTGGCGAGCCA...TTTGTAATGCAGTATTCTTTCTCTGTGTTTGACAGAGATGGGGAGGGGCAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290039.6
ENST00000651257.2
CDS-3UTR GCA 90 bp TGTGACTGTGTTGTTGTTTCTCTCGTTTTTAACCATGTCGACAGGCAGGAAATGCTCTGTTGCAGGCTCTaGTCCGCGCCGCGGTGGCGA +
Preference number: 4 (lower is better)
Translates to: CDCVVVSLVFNHVDRQEMLCCRL*SAPRWR
Trigger: TCGCCACCGCGGCGCGGAGCAGAGCCTGCAACAGAG...CATTTCCTGCCTGTCGACATGGTTAAAAACGAGAGAAACAACAACACAGTCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651257.2
CDS-3UTR CCA 90 bp CCTCTGCCCCTCCCCATCTCTGTCAAACACAGAGAAAGAATACTGCATTACAAAGTCACCGGCTCCTGGTaGACCTCGCAGCTGGGGTTT +
Preference number: 4 (lower is better)
Translates to: PLPLPISVKHRERILHYKVTGSW*TSQLGF
Trigger: AAACCCCAGCTGCGAGGTCCACCAGGAGCCGGTGAC...TTTGTAATGCAGTATTCTTTCTCTGTGTTTGACAGAGATGGGGAGGGGCAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CCA 90 bp CCTCTGCCCCTCCCCATCTCTGTCAAACACAGAGAAAGAATACTGCATTACAAACCCATCGGCAGTTCCTaGTCGGCCTTGCTCGCACCT +
Preference number: 4 (lower is better)
Translates to: PLPLPISVKHRERILHYKPIGSS*SALLAP
Trigger: AGGTGCGAGCAAGGCCGACCAGGAACTGCCGATGGG...TTTGTAATGCAGTATTCTTTCTCTGTGTTTGACAGAGATGGGGAGGGGCAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650260.1
3UTR CAA 72 bp CTGGCTCTTTGGAACATTCCTCTGGCTCAGCTTCACTaGCAGGTTCCGTCTCTGTGTTTGGAGGTTCGCCTT +
Preference number: 4 (lower is better)
Translates to: LALWNIPLAQLH*QVPSLCLEVRL
Trigger: AAGGCGAACCTCCAAACACAGAGACGGAACCTGCAAGTGAAGCTGAGCCAGAGGAATGTTCCAAAGAGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR TCA 90 bp TTGCAGGTTCCGTCTCTGTGTTTGGAGGTTCGCCTTCTGTTACCTTCCATTAGTGAAGCTGAGTGTCTGTaGCTGAAGCCCCGTGGTCCA +
Preference number: 4 (lower is better)
Translates to: LQVPSLCLEVRLLLPSISEAECL*LKPRGP
Trigger: TGGACCACGGGGCTTCAGTCACAGACACTCAGCTTC...ACTAATGGAAGGTAACAGAAGGCGAACCTCCAAACACAGAGACGGAACCTGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR TCA 90 bp TTGCAGGTTCCGTCTCTGTGTTTGGAGGTTCGCCTTCTGTTACCTTCCATTAGTGGGTTGCCAGCTGTTTaGAGTGGAGGCAAGCACTGG +
Preference number: 4 (lower is better)
Translates to: LQVPSLCLEVRLLLPSISGLPAV*SGGKHW
Trigger: CCAGTGCTTGCCTCCACTTCAAACAGCTGGCAACCC...ACTAATGGAAGGTAACAGAAGGCGAACCTCCAAACACAGAGACGGAACCTGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR TCA 90 bp CTCTGCCCCTCCCCATCTCTGTCAAACACAGAGAAAGAATACTGCATTACAAACTTGTCTCTGGCTGGCTaGGGTGCTCATAGGGGGAGG +
Preference number: 4 (lower is better)
Translates to: LCPSPSLSNTEKEYCITNLSLAG*GAHRGR
Trigger: CCTCCCCCTATGAGCACCTCAGCCAGCCAGAGACAA...GTTTGTAATGCAGTATTCTTTCTCTGTGTTTGACAGAGATGGGGAGGGGCAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR TCA 90 bp CTGTTACCTTCCATTAGTGTTATGGCAGGTCTGTTCATCAGGCTTATTTCCCCTGGGGCTCCTTGTGGGTaGTGTGCTGCTGCTCCACAG +
Preference number: 4 (lower is better)
Translates to: LLPSISVMAGLFIRLISPGAPCG*CAAAPQ
Trigger: CTGTGGAGCAGCAGCACATCACCCACAAGGAGCCCC...AGGGGAAATAAGCCTGATGAACAGACCTGCCATAACACTAATGGAAGGTAACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR TCA 90 bp TTGCAGGTTCCGTCTCTGTGTTTGGAGGTTCGCCTTCTGTTACCTTCCATTAGTCACATCGACCCCGGCTaGCAAGGGGTCATTGTTGCA +
Preference number: 4 (lower is better)
Translates to: LQVPSLCLEVRLLLPSISHIDPG*QGVIVA
Trigger: TGCAACAATGACCCCTTGTCAGCCGGGGTCGATGTG...ACTAATGGAAGGTAACAGAAGGCGAACCTCCAAACACAGAGACGGAACCTGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CCA 90 bp GCTAAGAAACAAAGCGAAATCTTCAATGCACACATTTGTATCTGCATGTGCCACGCCAGCCTCCGCATCTaGCTCGCCAGCACTTGCGCC +
Preference number: 4 (lower is better)
Translates to: AKKQSEIFNAHICICMCHASLRI*LASTCA
Trigger: GGCGCAAGTGCTGGCGAGCCAGATGCGGAGGCTGGC...GTGGCACATGCAGATACAAATGTGTGCATTGAAGATTTCGCTTTGTTTCTTAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290039.6
ENST00000651257.2
CDS-3UTR CCA 90 bp TTGCAGGTTCCGTCTCTGTGTTTGGAGGTTCGCCTTCTGTTACCTTCCATTAGTGGGACTGCGATAATCTaGCTGCCCAGAGGGAGGCTT +
Preference number: 4 (lower is better)
Translates to: LQVPSLCLEVRLLLPSISGTAII*LPRGRL
Trigger: AAGCCTCCCTCTGGGCAGCCAGATTATCGCAGTCCC...ACTAATGGAAGGTAACAGAAGGCGAACCTCCAAACACAGAGACGGAACCTGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CCA 90 bp CTGTTACCTTCCATTAGTGTTATGGCAGGTCTGTTCATCAGGCTTATTTCCCCTAGGCAAGCACTGGGCTaGCCAAGGAGATCCAGCCGG +
Preference number: 4 (lower is better)
Translates to: LLPSISVMAGLFIRLISPRQALG*PRRSSR
Trigger: CCGGCTGGATCTCCTTGGCCAGCCCAGTGCTTGCCT...AGGGGAAATAAGCCTGATGAACAGACCTGCCATAACACTAATGGAAGGTAACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CCA 90 bp CTGTTACCTTCCATTAGTGTTATGGCAGGTCTGTTCATCAGGCTTATTTCCCCTTATGTCACCGGCTCCTaGTGGACCTCGCAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: LLPSISVMAGLFIRLISPYVTGS*WTSQLG
Trigger: CCCCAGCTGCGAGGTCCACCAGGAGCCGGTGACATA...AGGGGAAATAAGCCTGATGAACAGACCTGCCATAACACTAATGGAAGGTAACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CCA 90 bp CATCGTTTAGAGCATAACATGAGTTCCATACAGCAACTGTGGTATCCAGGTACCGAAGGGATGTGGAGGTaGCGACCCGGGGTTTGCAGG +
Preference number: 4 (lower is better)
Translates to: HRLEHNMSSIQQLWYPGTEGMWR*RPGVCR
Trigger: CCTGCAAACCCCGGGTCGCCACCTCCACATCCCTTC...GGTACCTGGATACCACAGTTGCTGTATGGAACTCATGTTATGCTCTAAACGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650260.1
CDS-3UTR TCA 90 bp CCTCTGCCCCTCCCCATCTCTGTCAAACACAGAGAAAGAATACTGCATTACAAAGAAGCTGAGTGTCTGTaGCTGAAGCCCCGTGGTCCA +
Preference number: 4 (lower is better)
Translates to: PLPLPISVKHRERILHYKEAECL*LKPRGP
Trigger: TGGACCACGGGGCTTCAGTCACAGACACTCAGCTTC...TTTGTAATGCAGTATTCTTTCTCTGTGTTTGACAGAGATGGGGAGGGGCAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR TCA 90 bp CTGTTACCTTCCATTAGTGTTATGGCAGGTCTGTTCATCAGGCTTATTTCCCCTGGCGGGTGTTGTCGCTaGGATAGGCGGTGTAGTGCT +
Preference number: 4 (lower is better)
Translates to: LLPSISVMAGLFIRLISPGGCCR*DRRCSA
Trigger: AGCACTACACCGCCTATCTCAGCGACAACACCCGCC...AGGGGAAATAAGCCTGATGAACAGACCTGCCATAACACTAATGGAAGGTAACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR TCA 90 bp CTCTGCCCCTCCCCATCTCTGTCAAACACAGAGAAAGAATACTGCATTACAAACCACATCGACCCCGGCTaGCAAGGGGTCATTGTTGCA +
Preference number: 4 (lower is better)
Translates to: LCPSPSLSNTEKEYCITNHIDPG*QGVIVA
Trigger: TGCAACAATGACCCCTTGTCAGCCGGGGTCGATGTG...GTTTGTAATGCAGTATTCTTTCTCTGTGTTTGACAGAGATGGGGAGGGGCAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR TCA 90 bp CATCGTTTAGAGCATAACATGAGTTCCATACAGCAACTGTGGTATCCAGGTACCCGACAGTGTGTACCGTaGCGGCCGCCTGTAAGTGGT +
Preference number: 4 (lower is better)
Translates to: HRLEHNMSSIQQLWYPGTRQCVP*RPPVSG
Trigger: ACCACTTACAGGCGGCCGTCACGGTACACACTGTCG...GGTACCTGGATACCACAGTTGCTGTATGGAACTCATGTTATGCTCTAAACGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR TCA 90 bp CCTCTGCCCCTCCCCATCTCTGTCAAACACAGAGAAAGAATACTGCATTACAAAGCGTGCAGACTGCAATaGCTGGGCAGTTCCTCCACA +
Preference number: 4 (lower is better)
Translates to: PLPLPISVKHRERILHYKACRLQ*LGSSST
Trigger: TGTGGAGGAACTGCCCAGTCATTGCAGTCTGCACGC...TTTGTAATGCAGTATTCTTTCTCTGTGTTTGACAGAGATGGGGAGGGGCAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650260.1
CDS-3UTR GCA 90 bp TTGCAGGTTCCGTCTCTGTGTTTGGAGGTTCGCCTTCTGTTACCTTCCATTAGTCGTAGATGGGTCTACTaGGGTGTTCGTAGCTGCCCT +
Preference number: 4 (lower is better)
Translates to: LQVPSLCLEVRLLLPSISRRWVY*GVRSCP
Trigger: AGGGCAGCTACGAACACCGCAGTAGACCCATCTACG...ACTAATGGAAGGTAACAGAAGGCGAACCTCCAAACACAGAGACGGAACCTGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR GCA 90 bp TTGCAGGTTCCGTCTCTGTGTTTGGAGGTTCGCCTTCTGTTACCTTCCATTAGTCTGCTGCTCCACAGGTaGATGTCCTTTGGGGTCGAT +
Preference number: 4 (lower is better)
Translates to: LQVPSLCLEVRLLLPSISLLLHR*MSFGVD
Trigger: ATCGACCCCAAAGGACATGCACCTGTGGAGCAGCAG...ACTAATGGAAGGTAACAGAAGGCGAACCTCCAAACACAGAGACGGAACCTGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR GCA 90 bp CCTCTGCCCCTCCCCATCTCTGTCAAACACAGAGAAAGAATACTGCATTACAAAAGTTTCTTCCTCTGTTaGAGGCTCTGCTCCGCGCCG +
Preference number: 4 (lower is better)
Translates to: PLPLPISVKHRERILHYKSFFLC*RLCSAP
Trigger: CGGCGCGGAGCAGAGCCTGCAACAGAGGAAGAAACT...TTTGTAATGCAGTATTCTTTCTCTGTGTTTGACAGAGATGGGGAGGGGCAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000651257.2
CDS-3UTR CCA 90 bp GTTGTTGTTTCTCTCGTTTTTAACCATGTCGACAGGCAGGAAATGACTCAAACAGCGCCTCGTCCAGGATaGAGAAGTCGGCTTCGGCCC +
Preference number: 4 (lower is better)
Translates to: VVVSLVFNHVDRQEMTQTAPRPG*RSRLRP
Trigger: GGGCCGAAGCCGACTTCTCCATCCTGGACGAGGCGC...TGTTTGAGTCATTTCCTGCCTGTCGACATGGTTAAAAACGAGAGAAACAACAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000290039.6
ENST00000651257.2
CDS-3UTR CCA 90 bp CCTCTGCCCCTCCCCATCTCTGTCAAACACAGAGAAAGAATACTGCATTACAAAAGTGGAGGCAAGCACTaGGCTGGCCAAGGAGATCCA +
Preference number: 4 (lower is better)
Translates to: PLPLPISVKHRERILHYKSGGKH*AGQGDP
Trigger: TGGATCTCCTTGGCCAGCCCAGTGCTTGCCTCCACT...TTTGTAATGCAGTATTCTTTCTCTGTGTTTGACAGAGATGGGGAGGGGCAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CCA 90 bp CTGTTACCTTCCATTAGTGTTATGGCAGGTCTGTTCATCAGGCTTATTTCCCCTACCAGGGGCTCCTTGTaGGTGATGTGCTGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: LLPSISVMAGLFIRLISPTRGSL*VMCCCS
Trigger: GGAGCAGCAGCACATCACCCACAAGGAGCCCCTGGT...AGGGGAAATAAGCCTGATGAACAGACCTGCCATAACACTAATGGAAGGTAACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CCA 90 bp TGTGACTGTGTTGTTGTTTCTCTCGTTTTTAACCATGTCGACAGGCAGGAAATGGTCACCGGCTCCTGGTaGACCTCGCAGCTGGGGTTT +
Preference number: 4 (lower is better)
Translates to: CDCVVVSLVFNHVDRQEMVTGSW*TSQLGF
Trigger: AAACCCCAGCTGCGAGGTCCACCAGGAGCCGGTGAC...CATTTCCTGCCTGTCGACATGGTTAAAAACGAGAGAAACAACAACACAGTCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CCA 90 bp CTGTTACCTTCCATTAGTGTTATGGCAGGTCTGTTCATCAGGCTTATTTCCCCTGAAGTGGAAGGGATGTaGAGGTGGCGACCCGGGGTT +
Preference number: 4 (lower is better)
Translates to: LLPSISVMAGLFIRLISPEVEGM*RWRPGV
Trigger: AACCCCGGGTCGCCACCTCCACATCCCTTCCACTTC...AGGGGAAATAAGCCTGATGAACAGACCTGCCATAACACTAATGGAAGGTAACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650260.1
CDS-3UTR CCA 90 bp TTGGTGGATAATGTCTTGGCTAACTGGCAGCAGCTTTTAACCGTGATATTAAAATCCTCTTCCTCCGGCTaGCGGGCCATGCTGCCTCCC +
Preference number: 4 (lower is better)
Translates to: LVDNVLANWQQLLTVILKSSSSG*RAMLPP
Trigger: GGGAGGCAGCATGGCCCGCCAGCCGGAGGAAGAGGA...TTTTAATATCACGGTTAAAAGCTGCTGCCAGTTAGCCAAGACATTATCCACCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651257.2
CDS-3UTR TCA 90 bp GCTAAGAAACAAAGCGAAATCTTCAATGCACACATTTGTATCTGCATGTGCCACATATCCGCTGCATGGTaGCGACCCCCAGCTCCTCGG +
Preference number: 4 (lower is better)
Translates to: AKKQSEIFNAHICICMCHISAAW*RPPAPR
Trigger: CCGAGGAGCTGGGGGTCGTCACCATGCAGCGGATAT...GTGGCACATGCAGATACAAATGTGTGCATTGAAGATTTCGCTTTGTTTCTTAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000290039.6
ENST00000651257.2
CDS-3UTR TCA 90 bp CTCTGCCCCTCCCCATCTCTGTCAAACACAGAGAAAGAATACTGCATTACAAACCTGAGTGTCTGTGACTaGAGCCCCGTGGTCCAGAAT +
Preference number: 4 (lower is better)
Translates to: LCPSPSLSNTEKEYCITNLSVCD*SPVVQN
Trigger: ATTCTGGACCACGGGGCTTCAGTCACAGACACTCAG...GTTTGTAATGCAGTATTCTTTCTCTGTGTTTGACAGAGATGGGGAGGGGCAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR TCA 90 bp CTGTTACCTTCCATTAGTGTTATGGCAGGTCTGTTCATCAGGCTTATTTCCCCTGAAGCTGAGTGTCTGTaGCTGAAGCCCCGTGGTCCA +
Preference number: 4 (lower is better)
Translates to: LLPSISVMAGLFIRLISPEAECL*LKPRGP
Trigger: TGGACCACGGGGCTTCAGTCACAGACACTCAGCTTC...AGGGGAAATAAGCCTGATGAACAGACCTGCCATAACACTAATGGAAGGTAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR TCA 90 bp TTGCAGGTTCCGTCTCTGTGTTTGGAGGTTCGCCTTCTGTTACCTTCCATTAGTCTGGGTAGGACTGTCTaGAGACTTCACGCTGCTAAC +
Preference number: 4 (lower is better)
Translates to: LQVPSLCLEVRLLLPSISLGRTV*RLHAAN
Trigger: GTTAGCAGCGTGAAGTCTTCAGACAGTCCTACCCAG...ACTAATGGAAGGTAACAGAAGGCGAACCTCCAAACACAGAGACGGAACCTGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR TCA 90 bp TGTGACTGTGTTGTTGTTTCTCTCGTTTTTAACCATGTCGACAGGCAGGAAATGTTGTCTCTGGCTGGCTaGGGTGCTCATAGGGGGAGG +
Preference number: 4 (lower is better)
Translates to: CDCVVVSLVFNHVDRQEMLSLAG*GAHRGR
Trigger: CCTCCCCCTATGAGCACCTCAGCCAGCCAGAGACAA...CATTTCCTGCCTGTCGACATGGTTAAAAACGAGAGAAACAACAACACAGTCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR TCA 90 bp CATCGTTTAGAGCATAACATGAGTTCCATACAGCAACTGTGGTATCCAGGTACCCACATCGACCCCGGCTaGCAAGGGGTCATTGTTGCA +
Preference number: 4 (lower is better)
Translates to: HRLEHNMSSIQQLWYPGTHIDPG*QGVIVA
Trigger: TGCAACAATGACCCCTTGTCAGCCGGGGTCGATGTG...GGTACCTGGATACCACAGTTGCTGTATGGAACTCATGTTATGCTCTAAACGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR TCA 90 bp TTGCAGGTTCCGTCTCTGTGTTTGGAGGTTCGCCTTCTGTTACCTTCCATTAGTGCTCGGGGCAACTGCTaGAAACTTCTCCTGTGTTTC +
Preference number: 4 (lower is better)
Translates to: LQVPSLCLEVRLLLPSISARGNC*KLLLCF
Trigger: GAAACACAGGAGAAGTTTTCAGCAGTTGCCCCGAGC...ACTAATGGAAGGTAACAGAAGGCGAACCTCCAAACACAGAGACGGAACCTGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR GCA 90 bp TTGCAGGTTCCGTCTCTGTGTTTGGAGGTTCGCCTTCTGTTACCTTCCATTAGTTGCGGTGTTCGTAGCTaGCCTTACACCGGAACTTGT +
Preference number: 4 (lower is better)
Translates to: LQVPSLCLEVRLLLPSISCGVRS*PYTGTC
Trigger: ACAAGTTCCGGTGTAAGGGCAGCTACGAACACCGCA...ACTAATGGAAGGTAACAGAAGGCGAACCTCCAAACACAGAGACGGAACCTGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR GCA 90 bp TTGCAGGTTCCGTCTCTGTGTTTGGAGGTTCGCCTTCTGTTACCTTCCATTAGTACTATGTGCTTTGACTaGGGCCGGACTGTAGAGACG +
Preference number: 4 (lower is better)
Translates to: LQVPSLCLEVRLLLPSISTMCFD*GRTVET
Trigger: CGTCTCTACAGTCCGGCCGCAGTCAAAGCACATAGT...ACTAATGGAAGGTAACAGAAGGCGAACCTCCAAACACAGAGACGGAACCTGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR GCA 90 bp CTCTGCCCCTCCCCATCTCTGTCAAACACAGAGAAAGAATACTGCATTACAAACAGAGTCGGTCCACCATaGTGCAGGCACAGAAGGCAA +
Preference number: 4 (lower is better)
Translates to: LCPSPSLSNTEKEYCITNRVGPP*CRHRRQ
Trigger: TTGCCTTCTGTGCCTGCAGCATGGTGGACCGACTCT...GTTTGTAATGCAGTATTCTTTCTCTGTGTTTGACAGAGATGGGGAGGGGCAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR GCA 90 bp TTGCAGGTTCCGTCTCTGTGTTTGGAGGTTCGCCTTCTGTTACCTTCCATTAGTGGGGTTTCGGTTCTCTaGATTGGTGAGGTTGCCAGT +
Preference number: 4 (lower is better)
Translates to: LQVPSLCLEVRLLLPSISGVSVL*IGEVAS
Trigger: ACTGGCAACCTCACCAATGCAGAGAACCGAAACCCC...ACTAATGGAAGGTAACAGAAGGCGAACCTCCAAACACAGAGACGGAACCTGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR GCA 90 bp CATCGTTTAGAGCATAACATGAGTTCCATACAGCAACTGTGGTATCCAGGTACCGTTCCTGGTCGGCCTTaGTCGCACCTGGCACTTAAG +
Preference number: 4 (lower is better)
Translates to: HRLEHNMSSIQQLWYPGTVPGRP*SHLALK
Trigger: CTTAAGTGCCAGGTGCGAGCAAGGCCGACCAGGAAC...GGTACCTGGATACCACAGTTGCTGTATGGAACTCATGTTATGCTCTAAACGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650260.1
CDS-3UTR GCA 90 bp AACATTAGGTTTCGTAGAAACCTAAGAATAGCATTGTACGAGGAGTGGAAACAAAAGGGAGGCGTCTGGTaGCACCACGCTGCGCTCCGG +
Preference number: 4 (lower is better)
Translates to: NIRFRRNLRIALYEEWKQKGGVW*HHAALR
Trigger: CCGGAGCGCAGCGTGGTGGCACCAGACGCCTCCCTT...TTGTTTCCACTCCTCGTACAATGCTATTCTTAGGTTTCTACGAAACCTAATGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651257.2
CDS-3UTR GCA 90 bp TTCCAACTACATATAAACGGAGATTTACCACACACATTCTTTACCATGGTGCAAGCGGCTCTCGCTTCCTaGGAGTCCCAGCGCAGCGAG +
Preference number: 4 (lower is better)
Translates to: FQLHINGDLPHTFFTMVQAALAS*ESQRSE
Trigger: CTCGCTGCGCTGGGACTCGCAGGAAGCGAGAGCCGC...TTGCACCATGGTAAAGAATGTGTGTGGTAAATCTCCGTTTATATGTAGTTGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651257.2
CDS-3UTR CCA 90 bp ACATATAAACGGAGATTTACCACACACATTCTTTACCATGGTGCAAGAATGCCTGCGCCTCGTCCAGGATaGAGAAGTCGGCTTCGGCCC +
Preference number: 4 (lower is better)
Translates to: TYKRRFTTHILYHGARMPAPRPG*RSRLRP
Trigger: GGGCCGAAGCCGACTTCTCCATCCTGGACGAGGCGC...AGGCATTCTTGCACCATGGTAAAGAATGTGTGTGGTAAATCTCCGTTTATATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290039.6
ENST00000651257.2
CDS-3UTR CCA 90 bp CTGTTACCTTCCATTAGTGTTATGGCAGGTCTGTTCATCAGGCTTATTTCCCCTGCCAGCTGTTTGAAGTaGAGGCAAGCACTGGGCTGG +
Preference number: 4 (lower is better)
Translates to: LLPSISVMAGLFIRLISPASCLK*RQALGW
Trigger: CCAGCCCAGTGCTTGCCTCCACTTCAAACAGCTGGC...AGGGGAAATAAGCCTGATGAACAGACCTGCCATAACACTAATGGAAGGTAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR TCA 90 bp CTCTGCCCCTCCCCATCTCTGTCAAACACAGAGAAAGAATACTGCATTACAAACCACTACTATGTGCTTTaGCTGCGGCCGGACTGTAGA +
Preference number: 4 (lower is better)
Translates to: LCPSPSLSNTEKEYCITNHYYVL*LRPDCR
Trigger: TCTACAGTCCGGCCGCAGTCAAAGCACATAGTAGTG...GTTTGTAATGCAGTATTCTTTCTCTGTGTTTGACAGAGATGGGGAGGGGCAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR TCA 90 bp CATCGTTTAGAGCATAACATGAGTTCCATACAGCAACTGTGGTATCCAGGTACCCTGAGTGTCTGTGACTaGAGCCCCGTGGTCCAGAAT +
Preference number: 4 (lower is better)
Translates to: HRLEHNMSSIQQLWYPGTLSVCD*SPVVQN
Trigger: ATTCTGGACCACGGGGCTTCAGTCACAGACACTCAG...GGTACCTGGATACCACAGTTGCTGTATGGAACTCATGTTATGCTCTAAACGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR TCA 90 bp CATCGTTTAGAGCATAACATGAGTTCCATACAGCAACTGTGGTATCCAGGTACCGTGCCAAGACAGGGATaGGTTCACAGGGACTGCGAT +
Preference number: 4 (lower is better)
Translates to: HRLEHNMSSIQQLWYPGTVPRQG*VHRDCD
Trigger: ATCGCAGTCCCTGTGAACTCATCCCTGTCTTGGCAC...GGTACCTGGATACCACAGTTGCTGTATGGAACTCATGTTATGCTCTAAACGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR TCA 90 bp TGTGACTGTGTTGTTGTTTCTCTCGTTTTTAACCATGTCGACAGGCAGGAAATGGGGTTGCCAGCTGTTTaGAGTGGAGGCAAGCACTGG +
Preference number: 4 (lower is better)
Translates to: CDCVVVSLVFNHVDRQEMGLPAV*SGGKHW
Trigger: CCAGTGCTTGCCTCCACTTCAAACAGCTGGCAACCC...CATTTCCTGCCTGTCGACATGGTTAAAAACGAGAGAAACAACAACACAGTCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR TCA 90 bp CATCGTTTAGAGCATAACATGAGTTCCATACAGCAACTGTGGTATCCAGGTACCTGCCAGCAGACAGCATaGTGGTGGGACTTTCTAGGG +
Preference number: 4 (lower is better)
Translates to: HRLEHNMSSIQQLWYPGTCQQTA*WWDFLG
Trigger: CCCTAGAAAGTCCCACCATCATGCTGTCTGCTGGCA...GGTACCTGGATACCACAGTTGCTGTATGGAACTCATGTTATGCTCTAAACGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR TCA 90 bp ACATATAAACGGAGATTTACCACACACATTCTTTACCATGGTGCAAGAATGCCTGGGGCTCCTTGTGGGTaGTGTGCTGCTGCTCCACAG +
Preference number: 4 (lower is better)
Translates to: TYKRRFTTHILYHGARMPGAPCG*CAAAPQ
Trigger: CTGTGGAGCAGCAGCACATCACCCACAAGGAGCCCC...AGGCATTCTTGCACCATGGTAAAGAATGTGTGTGGTAAATCTCCGTTTATATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR TCA 90 bp CTCTGCCCCTCCCCATCTCTGTCAAACACAGAGAAAGAATACTGCATTACAAACGGTTCTCTGCATTGGTaGGGTTGCCAGTGCACTCAT +
Preference number: 4 (lower is better)
Translates to: LCPSPSLSNTEKEYCITNGSLHW*GCQCTH
Trigger: ATGAGTGCACTGGCAACCTCACCAATGCAGAGAACC...GTTTGTAATGCAGTATTCTTTCTCTGTGTTTGACAGAGATGGGGAGGGGCAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR TCA 90 bp CTGTTACCTTCCATTAGTGTTATGGCAGGTCTGTTCATCAGGCTTATTTCCCCTCCACTTTCCAGCCTCTaGCTGCACCTGCTGTTGACA +
Preference number: 4 (lower is better)
Translates to: LLPSISVMAGLFIRLISPPLSSL*LHLLLT
Trigger: TGTCAACAGCAGGTGCAGTCAGAGGCTGGAAAGTGG...AGGGGAAATAAGCCTGATGAACAGACCTGCCATAACACTAATGGAAGGTAACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR GCA 90 bp CTGTTACCTTCCATTAGTGTTATGGCAGGTCTGTTCATCAGGCTTATTTCCCCTCGTAGATGGGTCTACTaGGGTGTTCGTAGCTGCCCT +
Preference number: 4 (lower is better)
Translates to: LLPSISVMAGLFIRLISPRRWVY*GVRSCP
Trigger: AGGGCAGCTACGAACACCGCAGTAGACCCATCTACG...AGGGGAAATAAGCCTGATGAACAGACCTGCCATAACACTAATGGAAGGTAACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR GCA 90 bp TTGCAGGTTCCGTCTCTGTGTTTGGAGGTTCGCCTTCTGTTACCTTCCATTAGTCTGTGGTCTCCAGGTTaGTCAACTGATTCAGCACCA +
Preference number: 4 (lower is better)
Translates to: LQVPSLCLEVRLLLPSISLWSPG*STDSAP
Trigger: TGGTGCTGAATCAGTTGAGCAACCTGGAGACCACAG...ACTAATGGAAGGTAACAGAAGGCGAACCTCCAAACACAGAGACGGAACCTGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR GCA 90 bp CCTCTGCCCCTCCCCATCTCTGTCAAACACAGAGAAAGAATACTGCATTACAAAGGTTTGTGTAGAACCTaGCCACTGTGGTCTCCAGGT +
Preference number: 4 (lower is better)
Translates to: PLPLPISVKHRERILHYKGLCRT*PLWSPG
Trigger: ACCTGGAGACCACAGTGGGCAGGTTCTACACAAACC...TTTGTAATGCAGTATTCTTTCTCTGTGTTTGACAGAGATGGGGAGGGGCAGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR GCA 90 bp TTGCAGGTTCCGTCTCTGTGTTTGGAGGTTCGCCTTCTGTTACCTTCCATTAGTTCTTTCTGGACTGTGTaGATGTCGTTCGATGACCGC +
Preference number: 4 (lower is better)
Translates to: LQVPSLCLEVRLLLPSISSFWTV*MSFDDR
Trigger: GCGGTCATCGAACGACATGCACACAGTCCAGAAAGA...ACTAATGGAAGGTAACAGAAGGCGAACCTCCAAACACAGAGACGGAACCTGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR GCA 90 bp TTGCAGGTTCCGTCTCTGTGTTTGGAGGTTCGCCTTCTGTTACCTTCCATTAGTTGGCTCAGCTTCACTTaGAGGTTCCGTCTCTGTGTT +
Preference number: 4 (lower is better)
Translates to: LQVPSLCLEVRLLLPSISWLSFT*RFRLCV
Trigger: AACACAGAGACGGAACCTGCAAGTGAAGCTGAGCCA...ACTAATGGAAGGTAACAGAAGGCGAACCTCCAAACACAGAGACGGAACCTGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR GCA 90 bp AACATTAGGTTTCGTAGAAACCTAAGAATAGCATTGTACGAGGAGTGGAAACAACTGGTGCCACCACGCTaGGCTCCGGCTCTGTGCACT +
Preference number: 4 (lower is better)
Translates to: NIRFRRNLRIALYEEWKQLVPPR*APALCT
Trigger: AGTGCACAGAGCCGGAGCGCAGCGTGGTGGCACCAG...TTGTTTCCACTCCTCGTACAATGCTATTCTTAGGTTTCTACGAAACCTAATGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651257.2
CDS-3UTR CCA 90 bp CCTCTGCCCCTCCCCATCTCTGTCAAACACAGAGAAAGAATACTGCATTACAAAAATCCCACTGCGTGCTaGGTAGGACTGTCTGAAGAC +
Preference number: 4 (lower is better)
Translates to: PLPLPISVKHRERILHYKNPTAC*VGLSED
Trigger: GTCTTCAGACAGTCCTACCCAGCACGCAGTGGGATT...TTTGTAATGCAGTATTCTTTCTCTGTGTTTGACAGAGATGGGGAGGGGCAGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CCA 90 bp CTCTGCCCCTCCCCATCTCTGTCAAACACAGAGAAAGAATACTGCATTACAAACAGAACCTGCCCACTGTaGTCTCCAGGTTGCTCAACT +
Preference number: 4 (lower is better)
Translates to: LCPSPSLSNTEKEYCITNRTCPL*SPGCST
Trigger: AGTTGAGCAACCTGGAGACCACAGTGGGCAGGTTCT...GTTTGTAATGCAGTATTCTTTCTCTGTGTTTGACAGAGATGGGGAGGGGCAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CCA 90 bp TTGGTGGATAATGTCTTGGCTAACTGGCAGCAGCTTTTAACCGTGATATTAAAAAGGCAAGCACTGGGCTaGCCAAGGAGATCCAGCCGG +
Preference number: 4 (lower is better)
Translates to: LVDNVLANWQQLLTVILKRQALG*PRRSSR
Trigger: CCGGCTGGATCTCCTTGGCCAGCCCAGTGCTTGCCT...TTTTAATATCACGGTTAAAAGCTGCTGCCAGTTAGCCAAGACATTATCCACCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CCA 90 bp GTTGTTGTTTCTCTCGTTTTTAACCATGTCGACAGGCAGGAAATGACTCAAACAACCAGGGGCTCCTTGTaGGTGATGTGCTGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: VVVSLVFNHVDRQEMTQTTRGSL*VMCCCS
Trigger: GGAGCAGCAGCACATCACCCACAAGGAGCCCCTGGT...TGTTTGAGTCATTTCCTGCCTGTCGACATGGTTAAAAACGAGAGAAACAACAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CCA 90 bp TTGGTGGATAATGTCTTGGCTAACTGGCAGCAGCTTTTAACCGTGATATTAAAATATGTCACCGGCTCCTaGTGGACCTCGCAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: LVDNVLANWQQLLTVILKYVTGS*WTSQLG
Trigger: CCCCAGCTGCGAGGTCCACCAGGAGCCGGTGACATA...TTTTAATATCACGGTTAAAAGCTGCTGCCAGTTAGCCAAGACATTATCCACCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CCA 90 bp CCTCTGCCCCTCCCCATCTCTGTCAAACACAGAGAAAGAATACTGCATTACAAAATGCCTCTGTCTTCGTaGCTGTCGTCGTCCCTTTCA +
Preference number: 4 (lower is better)
Translates to: PLPLPISVKHRERILHYKMPLSS*LSSSLS
Trigger: TGAAAGGGACGACGACAGCCACGAAGACAGAGGCAT...TTTGTAATGCAGTATTCTTTCTCTGTGTTTGACAGAGATGGGGAGGGGCAGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CCA 90 bp CTGTTACCTTCCATTAGTGTTATGGCAGGTCTGTTCATCAGGCTTATTTCCCCTGCGGCGCCTTCTTTCTaGACTGTGTGCATGTCGTTC +
Preference number: 4 (lower is better)
Translates to: LLPSISVMAGLFIRLISPAAPSF*TVCMSF
Trigger: GAACGACATGCACACAGTCCAGAAAGAAGGCGCCGC...AGGGGAAATAAGCCTGATGAACAGACCTGCCATAACACTAATGGAAGGTAACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CCA 90 bp TTGCAGGTTCCGTCTCTGTGTTTGGAGGTTCGCCTTCTGTTACCTTCCATTAGTTCTAAGTCCTCATCATaGTTTCCCACATCGACCCCG +
Preference number: 4 (lower is better)
Translates to: LQVPSLCLEVRLLLPSISSKSSS*FPTSTP
Trigger: CGGGGTCGATGTGGGAAACCATGATGAGGACTTAGA...ACTAATGGAAGGTAACAGAAGGCGAACCTCCAAACACAGAGACGGAACCTGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CCA 90 bp CATCGTTTAGAGCATAACATGAGTTCCATACAGCAACTGTGGTATCCAGGTACCTTGAAGGGGCAGGCGTaGAAGACAAAGGGGCAGAAC +
Preference number: 4 (lower is better)
Translates to: HRLEHNMSSIQQLWYPGTLKGQA*KTKGQN
Trigger: GTTCTGCCCCTTTGTCTTCCACGCCTGCCCCTTCAA...GGTACCTGGATACCACAGTTGCTGTATGGAACTCATGTTATGCTCTAAACGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650260.1
CDS-3UTR CCA 90 bp TTCCAACTACATATAAACGGAGATTTACCACACACATTCTTTACCATGGTGCAAGGAAAGGGAGGCGTCTaGTGCCACCACGCTGCGCTC +
Preference number: 4 (lower is better)
Translates to: FQLHINGDLPHTFFTMVQGKGGV*CHHAAL
Trigger: GAGCGCAGCGTGGTGGCACCAGACGCCTCCCTTTCC...TTGCACCATGGTAAAGAATGTGTGTGGTAAATCTCCGTTTATATGTAGTTGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651257.2
CDS-3UTR CCA 90 bp ACATATAAACGGAGATTTACCACACACATTCTTTACCATGGTGCAAGAATGCCTTGCTCCGCGCCGCGGTaGCGAAGGCTCCCAAACTTA +
Preference number: 4 (lower is better)
Translates to: TYKRRFTTHILYHGARMPCSAPR*RRLPNL
Trigger: TAAGTTTGGGAGCCTTCGCCACCGCGGCGCGGAGCA...AGGCATTCTTGCACCATGGTAAAGAATGTGTGTGGTAAATCTCCGTTTATATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651257.2
CDS-3UTR TCA 90 bp AACATTAGGTTTCGTAGAAACCTAAGAATAGCATTGTACGAGGAGTGGAAACAAATATCCGCTGCATGGTaGCGACCCCCAGCTCCTCGG +
Preference number: 4 (lower is better)
Translates to: NIRFRRNLRIALYEEWKQISAAW*RPPAPR
Trigger: CCGAGGAGCTGGGGGTCGTCACCATGCAGCGGATAT...TTGTTTCCACTCCTCGTACAATGCTATTCTTAGGTTTCTACGAAACCTAATGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000290039.6
ENST00000651257.2
CDS-3UTR TCA 90 bp CATCGTTTAGAGCATAACATGAGTTCCATACAGCAACTGTGGTATCCAGGTACCCACTACTATGTGCTTTaGCTGCGGCCGGACTGTAGA +
Preference number: 4 (lower is better)
Translates to: HRLEHNMSSIQQLWYPGTHYYVL*LRPDCR
Trigger: TCTACAGTCCGGCCGCAGTCAAAGCACATAGTAGTG...GGTACCTGGATACCACAGTTGCTGTATGGAACTCATGTTATGCTCTAAACGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR TCA 90 bp CTCTGCCCCTCCCCATCTCTGTCAAACACAGAGAAAGAATACTGCATTACAAACTCCAGGTTGCTCAACTaGTTCAGCACCATCATGCTG +
Preference number: 4 (lower is better)
Translates to: LCPSPSLSNTEKEYCITNSRLLN*FSTIML
Trigger: CAGCATGATGGTGCTGAATCAGTTGAGCAACCTGGA...GTTTGTAATGCAGTATTCTTTCTCTGTGTTTGACAGAGATGGGGAGGGGCAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR TCA 90 bp TGTGACTGTGTTGTTGTTTCTCTCGTTTTTAACCATGTCGACAGGCAGGAAATGGTGCCAAGACAGGGATaGGTTCACAGGGACTGCGAT +
Preference number: 4 (lower is better)
Translates to: CDCVVVSLVFNHVDRQEMVPRQG*VHRDCD
Trigger: ATCGCAGTCCCTGTGAACTCATCCCTGTCTTGGCAC...CATTTCCTGCCTGTCGACATGGTTAAAAACGAGAGAAACAACAACACAGTCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR TCA 90 bp TTGGTGGATAATGTCTTGGCTAACTGGCAGCAGCTTTTAACCGTGATATTAAAAGGCGGGTGTTGTCGCTaGGATAGGCGGTGTAGTGCT +
Preference number: 4 (lower is better)
Translates to: LVDNVLANWQQLLTVILKGGCCR*DRRCSA
Trigger: AGCACTACACCGCCTATCTCAGCGACAACACCCGCC...TTTTAATATCACGGTTAAAAGCTGCTGCCAGTTAGCCAAGACATTATCCACCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR TCA 90 bp AACATTAGGTTTCGTAGAAACCTAAGAATAGCATTGTACGAGGAGTGGAAACAAGTCCTTTGGGGTCGATaGGAGTCGGGTGCGCCACCA +
Preference number: 4 (lower is better)
Translates to: NIRFRRNLRIALYEEWKQVLWGR*ESGAPP
Trigger: TGGTGGCGCACCCGACTCTCATCGACCCCAAAGGAC...TTGTTTCCACTCCTCGTACAATGCTATTCTTAGGTTTCTACGAAACCTAATGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR TCA 90 bp TTCCAACTACATATAAACGGAGATTTACCACACACATTCTTTACCATGGTGCAAGTCCTTTGGGGTCGATaGGAGTCGGGTGCGCCACCA +
Preference number: 4 (lower is better)
Translates to: FQLHINGDLPHTFFTMVQVLWGR*ESGAPP
Trigger: TGGTGGCGCACCCGACTCTCATCGACCCCAAAGGAC...TTGCACCATGGTAAAGAATGTGTGTGGTAAATCTCCGTTTATATGTAGTTGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR TCA 90 bp TGTGACTGTGTTGTTGTTTCTCTCGTTTTTAACCATGTCGACAGGCAGGAAATGCCACTTTCCAGCCTCTaGCTGCACCTGCTGTTGACA +
Preference number: 4 (lower is better)
Translates to: CDCVVVSLVFNHVDRQEMPLSSL*LHLLLT
Trigger: TGTCAACAGCAGGTGCAGTCAGAGGCTGGAAAGTGG...CATTTCCTGCCTGTCGACATGGTTAAAAACGAGAGAAACAACAACACAGTCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR TCA 90 bp CTCTGCCCCTCCCCATCTCTGTCAAACACAGAGAAAGAATACTGCATTACAAACGTTGGACATACGCACTaGCATTTCTTGGGCAGCAAG +
Preference number: 4 (lower is better)
Translates to: LCPSPSLSNTEKEYCITNVGHTH*HFLGSK
Trigger: CTTGCTGCCCAAGAAATGTCAGTGCGTATGTCCAAC...GTTTGTAATGCAGTATTCTTTCTCTGTGTTTGACAGAGATGGGGAGGGGCAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR TCA 90 bp TGTGACTGTGTTGTTGTTTCTCTCGTTTTTAACCATGTCGACAGGCAGGAAATGATCACTTTCTGTTCCTaGTCGACCCCAGTAGCGGCG +
Preference number: 4 (lower is better)
Translates to: CDCVVVSLVFNHVDRQEMITFCS*STPVAA
Trigger: CGCCGCTACTGGGGTCGATCAGGAACAGAAAGTGAT...CATTTCCTGCCTGTCGACATGGTTAAAAACGAGAGAAACAACAACACAGTCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR TCA 90 bp TTGGTGGATAATGTCTTGGCTAACTGGCAGCAGCTTTTAACCGTGATATTAAAACGACAGTGTGTACCGTaGCGGCCGCCTGTAAGTGGT +
Preference number: 4 (lower is better)
Translates to: LVDNVLANWQQLLTVILKRQCVP*RPPVSG
Trigger: ACCACTTACAGGCGGCCGTCACGGTACACACTGTCG...TTTTAATATCACGGTTAAAAGCTGCTGCCAGTTAGCCAAGACATTATCCACCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR TCA 90 bp CTGTTACCTTCCATTAGTGTTATGGCAGGTCTGTTCATCAGGCTTATTTCCCCTGCTCGGGGCAACTGCTaGAAACTTCTCCTGTGTTTC +
Preference number: 4 (lower is better)
Translates to: LLPSISVMAGLFIRLISPARGNC*KLLLCF
Trigger: GAAACACAGGAGAAGTTTTCAGCAGTTGCCCCGAGC...AGGGGAAATAAGCCTGATGAACAGACCTGCCATAACACTAATGGAAGGTAACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR TCA 90 bp CCTCTGCCCCTCCCCATCTCTGTCAAACACAGAGAAAGAATACTGCATTACAAACAACCCTCCCTTAGCTaGAAGGATGCGGTTCTAACA +
Preference number: 4 (lower is better)
Translates to: PLPLPISVKHRERILHYKQPSLS*KDAVLT
Trigger: TGTTAGAACCGCATCCTTTCAGCTAAGGGAGGGTTG...TTTGTAATGCAGTATTCTTTCTCTGTGTTTGACAGAGATGGGGAGGGGCAGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR TCA 90 bp ACATATAAACGGAGATTTACCACACACATTCTTTACCATGGTGCAAGAATGCCTCAGGGCAAGAGGAGTTaGAGGGGCAGGCGTGGAAGA +
Preference number: 4 (lower is better)
Translates to: TYKRRFTTHILYHGARMPQGKRS*RGRRGR
Trigger: TCTTCCACGCCTGCCCCTTCAACTCCTCTTGCCCTG...AGGCATTCTTGCACCATGGTAAAGAATGTGTGTGGTAAATCTCCGTTTATATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650260.1
CDS-3UTR TCA 90 bp AACATTAGGTTTCGTAGAAACCTAAGAATAGCATTGTACGAGGAGTGGAAACAAGGTGGCAGTCCAGTCTaGCAGGTGAAGCCCATCGGC +
Preference number: 4 (lower is better)
Translates to: NIRFRRNLRIALYEEWKQGGSPV*QVKPIG
Trigger: GCCGATGGGCTTCACCTGTCAGACTGGACTGCCACC...TTGTTTCCACTCCTCGTACAATGCTATTCTTAGGTTTCTACGAAACCTAATGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650260.1
CDS-3UTR GCA 90 bp AACATTAGGTTTCGTAGAAACCTAAGAATAGCATTGTACGAGGAGTGGAAACAATGGCTCGCCAGCACTTaGGCCTCGTCCAGGATGGAG +
Preference number: 4 (lower is better)
Translates to: NIRFRRNLRIALYEEWKQWLAST*ASSRME
Trigger: CTCCATCCTGGACGAGGCGCAAGTGCTGGCGAGCCA...TTGTTTCCACTCCTCGTACAATGCTATTCTTAGGTTTCTACGAAACCTAATGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290039.6
ENST00000651257.2
CDS-3UTR GCA 90 bp CATCGTTTAGAGCATAACATGAGTTCCATACAGCAACTGTGGTATCCAGGTACCTGGAATCCCACTGCGTaGTGGGTAGGACTGTCTGAA +
Preference number: 4 (lower is better)
Translates to: HRLEHNMSSIQQLWYPGTWNPTA*WVGLSE
Trigger: TTCAGACAGTCCTACCCAGCACGCAGTGGGATTCCA...GGTACCTGGATACCACAGTTGCTGTATGGAACTCATGTTATGCTCTAAACGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR GCA 90 bp CTGTTACCTTCCATTAGTGTTATGGCAGGTCTGTTCATCAGGCTTATTTCCCCTGGTTTGTGTAGAACCTaGCCACTGTGGTCTCCAGGT +
Preference number: 4 (lower is better)
Translates to: LLPSISVMAGLFIRLISPGLCRT*PLWSPG
Trigger: ACCTGGAGACCACAGTGGGCAGGTTCTACACAAACC...AGGGGAAATAAGCCTGATGAACAGACCTGCCATAACACTAATGGAAGGTAACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR GCA 90 bp CCTCTGCCCCTCCCCATCTCTGTCAAACACAGAGAAAGAATACTGCATTACAAAGACGCCATTGGGTGTTaGTATGTAACGGCGGACAAT +
Preference number: 4 (lower is better)
Translates to: PLPLPISVKHRERILHYKDAIGC*YVTADN
Trigger: ATTGTCCGCCGTTACATAGCAACACCCAATGGCGTC...TTTGTAATGCAGTATTCTTTCTCTGTGTTTGACAGAGATGGGGAGGGGCAGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR GCA 90 bp TGTGACTGTGTTGTTGTTTCTCTCGTTTTTAACCATGTCGACAGGCAGGAAATGTCCTTGTGGGTGATGTaGTGCTGCTCCACAGGTGCA +
Preference number: 4 (lower is better)
Translates to: CDCVVVSLVFNHVDRQEMSLWVM*CCSTGA
Trigger: TGCACCTGTGGAGCAGCAGCACATCACCCACAAGGA...CATTTCCTGCCTGTCGACATGGTTAAAAACGAGAGAAACAACAACACAGTCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR GCA 90 bp CTCTGCCCCTCCCCATCTCTGTCAAACACAGAGAAAGAATACTGCATTACAAACTCTTTCTGGACTGTGTaGATGTCGTTCGATGACCGC +
Preference number: 4 (lower is better)
Translates to: LCPSPSLSNTEKEYCITNSFWTV*MSFDDR
Trigger: GCGGTCATCGAACGACATGCACACAGTCCAGAAAGA...GTTTGTAATGCAGTATTCTTTCTCTGTGTTTGACAGAGATGGGGAGGGGCAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR GCA 90 bp TTGCAGGTTCCGTCTCTGTGTTTGGAGGTTCGCCTTCTGTTACCTTCCATTAGTCCTGTGGGCTCATGGTaGTGTAACCATGATCACTTT +
Preference number: 4 (lower is better)
Translates to: LQVPSLCLEVRLLLPSISPVGSW*CNHDHF
Trigger: AAAGTGATCATGGTTACAGCACCATGAGCCCACAGG...ACTAATGGAAGGTAACAGAAGGCGAACCTCCAAACACAGAGACGGAACCTGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CCA 90 bp CATCGTTTAGAGCATAACATGAGTTCCATACAGCAACTGTGGTATCCAGGTACCCCTGAGCAGCGTCCTTaGCAATCTGAAGCTGAGTGT +
Preference number: 4 (lower is better)
Translates to: HRLEHNMSSIQQLWYPGTPEQRP*QSEAEC
Trigger: ACACTCAGCTTCAGATTGCCAAGGACGCTGCTCAGG...GGTACCTGGATACCACAGTTGCTGTATGGAACTCATGTTATGCTCTAAACGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CCA 90 bp GCTAAGAAACAAAGCGAAATCTTCAATGCACACATTTGTATCTGCATGTGCCACGGGACTGCGATAATCTaGCTGCCCAGAGGGAGGCTT +
Preference number: 4 (lower is better)
Translates to: AKKQSEIFNAHICICMCHGTAII*LPRGRL
Trigger: AAGCCTCCCTCTGGGCAGCCAGATTATCGCAGTCCC...GTGGCACATGCAGATACAAATGTGTGCATTGAAGATTTCGCTTTGTTTCTTAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CCA 90 bp GCTAAGAAACAAAGCGAAATCTTCAATGCACACATTTGTATCTGCATGTGCCACAGGAGATCCAGCCGGTaGTACAGCAGCTTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: AKKQSEIFNAHICICMCHRRSSR*YSSLLL
Trigger: CAGCAGCAAGCTGCTGTACCACCGGCTGGATCTCCT...GTGGCACATGCAGATACAAATGTGTGCATTGAAGATTTCGCTTTGTTTCTTAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CCA 90 bp GTTGTTGTTTCTCTCGTTTTTAACCATGTCGACAGGCAGGAAATGACTCAAACAGCCAGCTGTTTGAAGTaGAGGCAAGCACTGGGCTGG +
Preference number: 4 (lower is better)
Translates to: VVVSLVFNHVDRQEMTQTASCLK*RQALGW
Trigger: CCAGCCCAGTGCTTGCCTCCACTTCAAACAGCTGGC...TGTTTGAGTCATTTCCTGCCTGTCGACATGGTTAAAAACGAGAGAAACAACAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CCA 90 bp CTGTTACCTTCCATTAGTGTTATGGCAGGTCTGTTCATCAGGCTTATTTCCCCTCATGCGCTTTGTCTCTaGCTGGCTGAGGTGCTCATA +
Preference number: 4 (lower is better)
Translates to: LLPSISVMAGLFIRLISPHALCL*LAEVLI
Trigger: TATGAGCACCTCAGCCAGCCAGAGACAAAGCGCATG...AGGGGAAATAAGCCTGATGAACAGACCTGCCATAACACTAATGGAAGGTAACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CCA 90 bp GTTGTTGTTTCTCTCGTTTTTAACCATGTCGACAGGCAGGAAATGACTCAAACAGGTGGACCTCGCAGCTaGGGTTTCGGTTCTCTGCAT +
Preference number: 4 (lower is better)
Translates to: VVVSLVFNHVDRQEMTQTGGPRS*GFGSLH
Trigger: ATGCAGAGAACCGAAACCCCAGCTGCGAGGTCCACC...TGTTTGAGTCATTTCCTGCCTGTCGACATGGTTAAAAACGAGAGAAACAACAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CCA 90 bp GCTAAGAAACAAAGCGAAATCTTCAATGCACACATTTGTATCTGCATGTGCCACGGTGGACCTCGCAGCTaGGGTTTCGGTTCTCTGCAT +
Preference number: 4 (lower is better)
Translates to: AKKQSEIFNAHICICMCHGGPRS*GFGSLH
Trigger: ATGCAGAGAACCGAAACCCCAGCTGCGAGGTCCACC...GTGGCACATGCAGATACAAATGTGTGCATTGAAGATTTCGCTTTGTTTCTTAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CCA 90 bp TTCCAACTACATATAAACGGAGATTTACCACACACATTCTTTACCATGGTGCAATATGTCACCGGCTCCTaGTGGACCTCGCAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: FQLHINGDLPHTFFTMVQYVTGS*WTSQLG
Trigger: CCCCAGCTGCGAGGTCCACCAGGAGCCGGTGACATA...TTGCACCATGGTAAAGAATGTGTGTGGTAAATCTCCGTTTATATGTAGTTGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CCA 90 bp TTGCAGGTTCCGTCTCTGTGTTTGGAGGTTCGCCTTCTGTTACCTTCCATTAGTCGCACTGACATTTCTTaGGCAGCAAGAGGAGACATA +
Preference number: 4 (lower is better)
Translates to: LQVPSLCLEVRLLLPSISRTDIS*AARGDI
Trigger: TATGTCTCCTCTTGCTGCCCAAGAAATGTCAGTGCG...ACTAATGGAAGGTAACAGAAGGCGAACCTCCAAACACAGAGACGGAACCTGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CCA 90 bp CATCGTTTAGAGCATAACATGAGTTCCATACAGCAACTGTGGTATCCAGGTACCATGCCTCTGTCTTCGTaGCTGTCGTCGTCCCTTTCA +
Preference number: 4 (lower is better)
Translates to: HRLEHNMSSIQQLWYPGTMPLSS*LSSSLS
Trigger: TGAAAGGGACGACGACAGCCACGAAGACAGAGGCAT...GGTACCTGGATACCACAGTTGCTGTATGGAACTCATGTTATGCTCTAAACGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CCA 90 bp CATCGTTTAGAGCATAACATGAGTTCCATACAGCAACTGTGGTATCCAGGTACCCCTCCTGTGGGCTCATaGTGCTGTAACCATGATCAC +
Preference number: 4 (lower is better)
Translates to: HRLEHNMSSIQQLWYPGTPPVGS*CCNHDH
Trigger: GTGATCATGGTTACAGCACCATGAGCCCACAGGAGG...GGTACCTGGATACCACAGTTGCTGTATGGAACTCATGTTATGCTCTAAACGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CCA 90 bp CTGTTACCTTCCATTAGTGTTATGGCAGGTCTGTTCATCAGGCTTATTTCCCCTTTCACTGTCCTCCTGTaGGCTCATGGTGCTGTAACC +
Preference number: 4 (lower is better)
Translates to: LLPSISVMAGLFIRLISPFTVLL*AHGAVT
Trigger: GGTTACAGCACCATGAGCCCACAGGAGGACAGTGAA...AGGGGAAATAAGCCTGATGAACAGACCTGCCATAACACTAATGGAAGGTAACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CCA 90 bp TTGCAGGTTCCGTCTCTGTGTTTGGAGGTTCGCCTTCTGTTACCTTCCATTAGTGGGGTCATTGTTGCATaGAGGATTTTCACTGTCCTC +
Preference number: 4 (lower is better)
Translates to: LQVPSLCLEVRLLLPSISGVIVA*RIFTVL
Trigger: GAGGACAGTGAAAATCCTCCATGCAACAATGACCCC...ACTAATGGAAGGTAACAGAAGGCGAACCTCCAAACACAGAGACGGAACCTGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CCA 90 bp TTGCAGGTTCCGTCTCTGTGTTTGGAGGTTCGCCTTCTGTTACCTTCCATTAGTATGCTTCTGGCTCTTTaGAACATTCCTCTGGCTCAG +
Preference number: 4 (lower is better)
Translates to: LQVPSLCLEVRLLLPSISMLLAL*NIPLAQ
Trigger: CTGAGCCAGAGGAATGTTCCAAAGAGCCAGAAGCAT...ACTAATGGAAGGTAACAGAAGGCGAACCTCCAAACACAGAGACGGAACCTGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CCA 90 bp TTGCAGGTTCCGTCTCTGTGTTTGGAGGTTCGCCTTCTGTTACCTTCCATTAGTAGTTCAATGAATGTGTaGCAGGTGGCAGTCCAGTCT +
Preference number: 4 (lower is better)
Translates to: LQVPSLCLEVRLLLPSISSSMNV*QVAVQS
Trigger: AGACTGGACTGCCACCTGCCACACATTCATTGAACT...ACTAATGGAAGGTAACAGAAGGCGAACCTCCAAACACAGAGACGGAACCTGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650260.1
CDS-3UTR TCA 90 bp TTGCAGGTTCCGTCTCTGTGTTTGGAGGTTCGCCTTCTGTTACCTTCCATTAGTGTACTTCGAATCAGCTaGAATGCCTTTTGGAATCCC +
Preference number: 4 (lower is better)
Translates to: LQVPSLCLEVRLLLPSISVLRIS*NAFWNP
Trigger: GGGATTCCAAAAGGCATTTCAGCTGATTCGAAGTAC...ACTAATGGAAGGTAACAGAAGGCGAACCTCCAAACACAGAGACGGAACCTGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR TCA 90 bp GCTAAGAAACAAAGCGAAATCTTCAATGCACACATTTGTATCTGCATGTGCCACGTGCCAAGACAGGGATaGGTTCACAGGGACTGCGAT +
Preference number: 4 (lower is better)
Translates to: AKKQSEIFNAHICICMCHVPRQG*VHRDCD
Trigger: ATCGCAGTCCCTGTGAACTCATCCCTGTCTTGGCAC...GTGGCACATGCAGATACAAATGTGTGCATTGAAGATTTCGCTTTGTTTCTTAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR TCA 90 bp ACATATAAACGGAGATTTACCACACACATTCTTTACCATGGTGCAAGAATGCCTGGGTTGCCAGCTGTTTaGAGTGGAGGCAAGCACTGG +
Preference number: 4 (lower is better)
Translates to: TYKRRFTTHILYHGARMPGLPAV*SGGKHW
Trigger: CCAGTGCTTGCCTCCACTTCAAACAGCTGGCAACCC...AGGCATTCTTGCACCATGGTAAAGAATGTGTGTGGTAAATCTCCGTTTATATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR TCA 90 bp TTCCAACTACATATAAACGGAGATTTACCACACACATTCTTTACCATGGTGCAAGGCGGGTGTTGTCGCTaGGATAGGCGGTGTAGTGCT +
Preference number: 4 (lower is better)
Translates to: FQLHINGDLPHTFFTMVQGGCCR*DRRCSA
Trigger: AGCACTACACCGCCTATCTCAGCGACAACACCCGCC...TTGCACCATGGTAAAGAATGTGTGTGGTAAATCTCCGTTTATATGTAGTTGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR TCA 90 bp GTTGTTGTTTCTCTCGTTTTTAACCATGTCGACAGGCAGGAAATGACTCAAACACCATTCGGTGACAGTTaGGACAGAGTCGGTCCACCA +
Preference number: 4 (lower is better)
Translates to: VVVSLVFNHVDRQEMTQTPFGDS*DRVGPP
Trigger: TGGTGGACCGACTCTGTCTCAACTGTCACCGAATGG...TGTTTGAGTCATTTCCTGCCTGTCGACATGGTTAAAAACGAGAGAAACAACAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR TCA 90 bp GCTAAGAAACAAAGCGAAATCTTCAATGCACACATTTGTATCTGCATGTGCCACTGCCAGTGCACTCATTaGCCTCTAGAGGGCACTCAC +
Preference number: 4 (lower is better)
Translates to: AKKQSEIFNAHICICMCHCQCTH*PLEGTH
Trigger: GTGAGTGCCCTCTAGAGGTCAATGAGTGCACTGGCA...GTGGCACATGCAGATACAAATGTGTGCATTGAAGATTTCGCTTTGTTTCTTAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR TCA 90 bp GTTGTTGTTTCTCTCGTTTTTAACCATGTCGACAGGCAGGAAATGACTCAAACACCACTTTCCAGCCTCTaGCTGCACCTGCTGTTGACA +
Preference number: 4 (lower is better)
Translates to: VVVSLVFNHVDRQEMTQTPLSSL*LHLLLT
Trigger: TGTCAACAGCAGGTGCAGTCAGAGGCTGGAAAGTGG...TGTTTGAGTCATTTCCTGCCTGTCGACATGGTTAAAAACGAGAGAAACAACAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR TCA 90 bp CTGTTACCTTCCATTAGTGTTATGGCAGGTCTGTTCATCAGGCTTATTTCCCCTCAACCCTCCCTTAGCTaGAAGGATGCGGTTCTAACA +
Preference number: 4 (lower is better)
Translates to: LLPSISVMAGLFIRLISPQPSLS*KDAVLT
Trigger: TGTTAGAACCGCATCCTTTCAGCTAAGGGAGGGTTG...AGGGGAAATAAGCCTGATGAACAGACCTGCCATAACACTAATGGAAGGTAACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR GCA 90 bp CCTCTGCCCCTCCCCATCTCTGTCAAACACAGAGAAAGAATACTGCATTACAAAAGAATCACTACTATGTaGTTTGACTGCGGCCGGACT +
Preference number: 4 (lower is better)
Translates to: PLPLPISVKHRERILHYKRITTM*FDCGRT
Trigger: AGTCCGGCCGCAGTCAAAGCACATAGTAGTGATTCT...TTTGTAATGCAGTATTCTTTCTCTGTGTTTGACAGAGATGGGGAGGGGCAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR GCA 90 bp CATCGTTTAGAGCATAACATGAGTTCCATACAGCAACTGTGGTATCCAGGTACCCTGTGGTCTCCAGGTTaGTCAACTGATTCAGCACCA +
Preference number: 4 (lower is better)
Translates to: HRLEHNMSSIQQLWYPGTLWSPG*STDSAP
Trigger: TGGTGCTGAATCAGTTGAGCAACCTGGAGACCACAG...GGTACCTGGATACCACAGTTGCTGTATGGAACTCATGTTATGCTCTAAACGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR GCA 90 bp TGTGACTGTGTTGTTGTTTCTCTCGTTTTTAACCATGTCGACAGGCAGGAAATGTGTAGTGCTCTACCATaGGCTTTGTCTCTGGCTGGC +
Preference number: 4 (lower is better)
Translates to: CDCVVVSLVFNHVDRQEMCSALP*ALSLAG
Trigger: GCCAGCCAGAGACAAAGCGCATGGTAGAGCACTACA...CATTTCCTGCCTGTCGACATGGTTAAAAACGAGAGAAACAACAACACAGTCACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR GCA 90 bp CATCGTTTAGAGCATAACATGAGTTCCATACAGCAACTGTGGTATCCAGGTACCGACGCCATTGGGTGTTaGTATGTAACGGCGGACAAT +
Preference number: 4 (lower is better)
Translates to: HRLEHNMSSIQQLWYPGTDAIGC*YVTADN
Trigger: ATTGTCCGCCGTTACATAGCAACACCCAATGGCGTC...GGTACCTGGATACCACAGTTGCTGTATGGAACTCATGTTATGCTCTAAACGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR GCA 90 bp CTCTGCCCCTCCCCATCTCTGTCAAACACAGAGAAAGAATACTGCATTACAAACCCTAGTGGGATCAAATaGTTTGTCCATGAGGGAACC +
Preference number: 4 (lower is better)
Translates to: LCPSPSLSNTEKEYCITNPSGIK*FVHEGT
Trigger: GGTTCCCTCATGGACAAAGCATTTGATCCCACTAGG...GTTTGTAATGCAGTATTCTTTCTCTGTGTTTGACAGAGATGGGGAGGGGCAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR GCA 90 bp TTGCAGGTTCCGTCTCTGTGTTTGGAGGTTCGCCTTCTGTTACCTTCCATTAGTCCCTGGATTAGCTACTaGATGGAGATACCATTGTCT +
Preference number: 4 (lower is better)
Translates to: LQVPSLCLEVRLLLPSISPWISY*MEIPLS
Trigger: AGACAATGGTATCTCCATGCAGTAGCTAATCCAGGG...ACTAATGGAAGGTAACAGAAGGCGAACCTCCAAACACAGAGACGGAACCTGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR GCA 90 bp GCTAAGAAACAAAGCGAAATCTTCAATGCACACATTTGTATCTGCATGTGCCACCTGCTGCTCCACAGGTaGATGTCCTTTGGGGTCGAT +
Preference number: 4 (lower is better)
Translates to: AKKQSEIFNAHICICMCHLLLHR*MSFGVD
Trigger: ATCGACCCCAAAGGACATGCACCTGTGGAGCAGCAG...GTGGCACATGCAGATACAAATGTGTGCATTGAAGATTTCGCTTTGTTTCTTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR GCA 90 bp TGTGACTGTGTTGTTGTTTCTCTCGTTTTTAACCATGTCGACAGGCAGGAAATGTTGTGGGTGATGTGCTaGTGCTCCACAGGTGCATGT +
Preference number: 4 (lower is better)
Translates to: CDCVVVSLVFNHVDRQEMLWVMC*CSTGAC
Trigger: ACATGCACCTGTGGAGCAGCAGCACATCACCCACAA...CATTTCCTGCCTGTCGACATGGTTAAAAACGAGAGAAACAACAACACAGTCACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR GCA 90 bp CTCTGCCCCTCCCCATCTCTGTCAAACACAGAGAAAGAATACTGCATTACAAACGTTGAGGATATCATTTaGTACCAGGGGCTCCTTGTG +
Preference number: 4 (lower is better)
Translates to: LCPSPSLSNTEKEYCITNVEDII*YQGLLV
Trigger: CACAAGGAGCCCCTGGTAGCAAATGATATCCTCAAC...GTTTGTAATGCAGTATTCTTTCTCTGTGTTTGACAGAGATGGGGAGGGGCAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR GCA 90 bp GTTGTTGTTTCTCTCGTTTTTAACCATGTCGACAGGCAGGAAATGACTCAAACAAGAGTCGGTCCACCATaGTGCAGGCACAGAAGGCAA +
Preference number: 4 (lower is better)
Translates to: VVVSLVFNHVDRQEMTQTRVGPP*CRHRRQ
Trigger: TTGCCTTCTGTGCCTGCAGCATGGTGGACCGACTCT...TGTTTGAGTCATTTCCTGCCTGTCGACATGGTTAAAAACGAGAGAAACAACAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR GCA 90 bp TGTGACTGTGTTGTTGTTTCTCTCGTTTTTAACCATGTCGACAGGCAGGAAATGGGGGTTTCGGTTCTCTaGATTGGTGAGGTTGCCAGT +
Preference number: 4 (lower is better)
Translates to: CDCVVVSLVFNHVDRQEMGVSVL*IGEVAS
Trigger: ACTGGCAACCTCACCAATGCAGAGAACCGAAACCCC...CATTTCCTGCCTGTCGACATGGTTAAAAACGAGAGAAACAACAACACAGTCACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR GCA 90 bp TTGCAGGTTCCGTCTCTGTGTTTGGAGGTTCGCCTTCTGTTACCTTCCATTAGTCACCTCATCACCTATTaGTCCCATGTCATCAACGTA +
Preference number: 4 (lower is better)
Translates to: LQVPSLCLEVRLLLPSISHLITY*SHVINV
Trigger: TACGTTGATGACATGGGAGCAATAGGTGATGAGGTG...ACTAATGGAAGGTAACAGAAGGCGAACCTCCAAACACAGAGACGGAACCTGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR GCA 90 bp CCTCTGCCCCTCCCCATCTCTGTCAAACACAGAGAAAGAATACTGCATTACAAACCTGTGGGCTCATGGTaGTGTAACCATGATCACTTT +
Preference number: 4 (lower is better)
Translates to: PLPLPISVKHRERILHYKPVGSW*CNHDHF
Trigger: AAAGTGATCATGGTTACAGCACCATGAGCCCACAGG...TTTGTAATGCAGTATTCTTTCTCTGTGTTTGACAGAGATGGGGAGGGGCAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR GCA 90 bp CTCTGCCCCTCCCCATCTCTGTCAAACACAGAGAAAGAATACTGCATTACAAACCCTGTGGGCTCATGGTaGTGTAACCATGATCACTTT +
Preference number: 4 (lower is better)
Translates to: LCPSPSLSNTEKEYCITNPVGSW*CNHDHF
Trigger: AAAGTGATCATGGTTACAGCACCATGAGCCCACAGG...GTTTGTAATGCAGTATTCTTTCTCTGTGTTTGACAGAGATGGGGAGGGGCAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR GCA 90 bp CATCGTTTAGAGCATAACATGAGTTCCATACAGCAACTGTGGTATCCAGGTACCTGGCTCAGCTTCACTTaGAGGTTCCGTCTCTGTGTT +
Preference number: 4 (lower is better)
Translates to: HRLEHNMSSIQQLWYPGTWLSFT*RFRLCV
Trigger: AACACAGAGACGGAACCTGCAAGTGAAGCTGAGCCA...GGTACCTGGATACCACAGTTGCTGTATGGAACTCATGTTATGCTCTAAACGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR GCA 90 bp ACATATAAACGGAGATTTACCACACACATTCTTTACCATGGTGCAAGAATGCCTTGGCGACCCGGGGTTTaGAGGGCAAGAGGAGTTGAA +
Preference number: 4 (lower is better)
Translates to: TYKRRFTTHILYHGARMPWRPGV*RARGVE
Trigger: TTCAACTCCTCTTGCCCTGCAAACCCCGGGTCGCCA...AGGCATTCTTGCACCATGGTAAAGAATGTGTGTGGTAAATCTCCGTTTATATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650260.1
CDS-3UTR CCA 90 bp CATCGTTTAGAGCATAACATGAGTTCCATACAGCAACTGTGGTATCCAGGTACCGTGACTGAAGCCCCGTaGTCCAGAATCACTACTATG +
Preference number: 4 (lower is better)
Translates to: HRLEHNMSSIQQLWYPGTVTEAP*SRITTM
Trigger: CATAGTAGTGATTCTGGACCACGGGGCTTCAGTCAC...GGTACCTGGATACCACAGTTGCTGTATGGAACTCATGTTATGCTCTAAACGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CCA 90 bp CTGTTACCTTCCATTAGTGTTATGGCAGGTCTGTTCATCAGGCTTATTTCCCCTGTGACTGAAGCCCCGTaGTCCAGAATCACTACTATG +
Preference number: 4 (lower is better)
Translates to: LLPSISVMAGLFIRLISPVTEAP*SRITTM
Trigger: CATAGTAGTGATTCTGGACCACGGGGCTTCAGTCAC...AGGGGAAATAAGCCTGATGAACAGACCTGCCATAACACTAATGGAAGGTAACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CCA 90 bp TGTGACTGTGTTGTTGTTTCTCTCGTTTTTAACCATGTCGACAGGCAGGAAATGAATCCCACTGCGTGCTaGGTAGGACTGTCTGAAGAC +
Preference number: 4 (lower is better)
Translates to: CDCVVVSLVFNHVDRQEMNPTAC*VGLSED
Trigger: GTCTTCAGACAGTCCTACCCAGCACGCAGTGGGATT...CATTTCCTGCCTGTCGACATGGTTAAAAACGAGAGAAACAACAACACAGTCACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CCA 90 bp TGTGACTGTGTTGTTGTTTCTCTCGTTTTTAACCATGTCGACAGGCAGGAAATGAGAACCTGCCCACTGTaGTCTCCAGGTTGCTCAACT +
Preference number: 4 (lower is better)
Translates to: CDCVVVSLVFNHVDRQEMRTCPL*SPGCST
Trigger: AGTTGAGCAACCTGGAGACCACAGTGGGCAGGTTCT...CATTTCCTGCCTGTCGACATGGTTAAAAACGAGAGAAACAACAACACAGTCACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CCA 90 bp ACATATAAACGGAGATTTACCACACACATTCTTTACCATGGTGCAAGAATGCCTGGGACTGCGATAATCTaGCTGCCCAGAGGGAGGCTT +
Preference number: 4 (lower is better)
Translates to: TYKRRFTTHILYHGARMPGTAII*LPRGRL
Trigger: AAGCCTCCCTCTGGGCAGCCAGATTATCGCAGTCCC...AGGCATTCTTGCACCATGGTAAAGAATGTGTGTGGTAAATCTCCGTTTATATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CCA 90 bp TTGGTGGATAATGTCTTGGCTAACTGGCAGCAGCTTTTAACCGTGATATTAAAAGCCAGCTGTTTGAAGTaGAGGCAAGCACTGGGCTGG +
Preference number: 4 (lower is better)
Translates to: LVDNVLANWQQLLTVILKASCLK*RQALGW
Trigger: CCAGCCCAGTGCTTGCCTCCACTTCAAACAGCTGGC...TTTTAATATCACGGTTAAAAGCTGCTGCCAGTTAGCCAAGACATTATCCACCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CCA 90 bp TTCCAACTACATATAAACGGAGATTTACCACACACATTCTTTACCATGGTGCAAACCAGGGGCTCCTTGTaGGTGATGTGCTGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: FQLHINGDLPHTFFTMVQTRGSL*VMCCCS
Trigger: GGAGCAGCAGCACATCACCCACAAGGAGCCCCTGGT...TTGCACCATGGTAAAGAATGTGTGTGGTAAATCTCCGTTTATATGTAGTTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CCA 90 bp CCTCTGCCCCTCCCCATCTCTGTCAAACACAGAGAAAGAATACTGCATTACAAACTGTATTTGGAACAGTaGCTGCCATGCACAAGGTTC +
Preference number: 4 (lower is better)
Translates to: PLPLPISVKHRERILHYKLYLEQ*LPCTRF
Trigger: GAACCTTGTGCATGGCAGCCACTGTTCCAAATACAG...TTTGTAATGCAGTATTCTTTCTCTGTGTTTGACAGAGATGGGGAGGGGCAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CCA 90 bp CATCGTTTAGAGCATAACATGAGTTCCATACAGCAACTGTGGTATCCAGGTACCTGCCAACAAACGCGTTaGTTCCTGGGATCCTTGCTA +
Preference number: 4 (lower is better)
Translates to: HRLEHNMSSIQQLWYPGTCQQTR*FLGSLL
Trigger: TAGCAAGGATCCCAGGAACCAACGCGTTTGTTGGCA...GGTACCTGGATACCACAGTTGCTGTATGGAACTCATGTTATGCTCTAAACGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CCA 90 bp CCTCTGCCCCTCCCCATCTCTGTCAAACACAGAGAAAGAATACTGCATTACAAAGGGGTCATTGTTGCATaGAGGATTTTCACTGTCCTC +
Preference number: 4 (lower is better)
Translates to: PLPLPISVKHRERILHYKGVIVA*RIFTVL
Trigger: GAGGACAGTGAAAATCCTCCATGCAACAATGACCCC...TTTGTAATGCAGTATTCTTTCTCTGTGTTTGACAGAGATGGGGAGGGGCAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CCA 90 bp CCTCTGCCCCTCCCCATCTCTGTCAAACACAGAGAAAGAATACTGCATTACAAAGGAGGTCTCTTGCTGTaGGTTTTAAGCCGGTTCTTT +
Preference number: 4 (lower is better)
Translates to: PLPLPISVKHRERILHYKGGLLL*VLSRFF
Trigger: AAAGAACCGGCTTAAAACCCACAGCAAGAGACCTCC...TTTGTAATGCAGTATTCTTTCTCTGTGTTTGACAGAGATGGGGAGGGGCAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CCA 90 bp CCTCTGCCCCTCCCCATCTCTGTCAAACACAGAGAAAGAATACTGCATTACAAAATGCTTCTGGCTCTTTaGAACATTCCTCTGGCTCAG +
Preference number: 4 (lower is better)
Translates to: PLPLPISVKHRERILHYKMLLAL*NIPLAQ
Trigger: CTGAGCCAGAGGAATGTTCCAAAGAGCCAGAAGCAT...TTTGTAATGCAGTATTCTTTCTCTGTGTTTGACAGAGATGGGGAGGGGCAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CCA 90 bp TTGCAGGTTCCGTCTCTGTGTTTGGAGGTTCGCCTTCTGTTACCTTCCATTAGTAATGTCTTGGCTAACTaGCAGCAGCTTTTAACCGTG +
Preference number: 4 (lower is better)
Translates to: LQVPSLCLEVRLLLPSISNVLAN*QQLLTV
Trigger: CACGGTTAAAAGCTGCTGCCAGTTAGCCAAGACATT...ACTAATGGAAGGTAACAGAAGGCGAACCTCCAAACACAGAGACGGAACCTGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CCA 90 bp TTGCAGGTTCCGTCTCTGTGTTTGGAGGTTCGCCTTCTGTTACCTTCCATTAGTTGGTGGATAATGTCTTaGCTAACTGGCAGCAGCTTT +
Preference number: 4 (lower is better)
Translates to: LQVPSLCLEVRLLLPSISWWIMS*LTGSSF
Trigger: AAAGCTGCTGCCAGTTAGCCAAGACATTATCCACCA...ACTAATGGAAGGTAACAGAAGGCGAACCTCCAAACACAGAGACGGAACCTGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CCA 90 bp TTGGTGGATAATGTCTTGGCTAACTGGCAGCAGCTTTTAACCGTGATATTAAAAGGCCTTGCTCGCACCTaGCACTTAAGAAGGCGTGCA +
Preference number: 4 (lower is better)
Translates to: LVDNVLANWQQLLTVILKGLART*HLRRRA
Trigger: TGCACGCCTTCTTAAGTGCCAGGTGCGAGCAAGGCC...TTTTAATATCACGGTTAAAAGCTGCTGCCAGTTAGCCAAGACATTATCCACCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650260.1
CDS-3UTR TCA 90 bp CTGTTACCTTCCATTAGTGTTATGGCAGGTCTGTTCATCAGGCTTATTTCCCCTCTTGCTTGTTCCGATTaGCCACATCCAAGTAACGGT +
Preference number: 4 (lower is better)
Translates to: LLPSISVMAGLFIRLISPLACSD*PHPSNG
Trigger: ACCGTTACTTGGATGTGGTCAATCGGAACAAGCAAG...AGGGGAAATAAGCCTGATGAACAGACCTGCCATAACACTAATGGAAGGTAACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR TCA 90 bp GCTAAGAAACAAAGCGAAATCTTCAATGCACACATTTGTATCTGCATGTGCCACCTGGGTAGGACTGTCTaGAGACTTCACGCTGCTAAC +
Preference number: 4 (lower is better)
Translates to: AKKQSEIFNAHICICMCHLGRTV*RLHAAN
Trigger: GTTAGCAGCGTGAAGTCTTCAGACAGTCCTACCCAG...GTGGCACATGCAGATACAAATGTGTGCATTGAAGATTTCGCTTTGTTTCTTAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR TCA 90 bp GTTGTTGTTTCTCTCGTTTTTAACCATGTCGACAGGCAGGAAATGACTCAAACACTGGGTAGGACTGTCTaGAGACTTCACGCTGCTAAC +
Preference number: 4 (lower is better)
Translates to: VVVSLVFNHVDRQEMTQTLGRTV*RLHAAN
Trigger: GTTAGCAGCGTGAAGTCTTCAGACAGTCCTACCCAG...TGTTTGAGTCATTTCCTGCCTGTCGACATGGTTAAAAACGAGAGAAACAACAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR TCA 90 bp CCTCTGCCCCTCCCCATCTCTGTCAAACACAGAGAAAGAATACTGCATTACAAAGTACTTCGAATCAGCTaGAATGCCTTTTGGAATCCC +
Preference number: 4 (lower is better)
Translates to: PLPLPISVKHRERILHYKVLRIS*NAFWNP
Trigger: GGGATTCCAAAAGGCATTTCAGCTGATTCGAAGTAC...TTTGTAATGCAGTATTCTTTCTCTGTGTTTGACAGAGATGGGGAGGGGCAGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR TCA 90 bp TGTGACTGTGTTGTTGTTTCTCTCGTTTTTAACCATGTCGACAGGCAGGAAATGTCCAGGTTGCTCAACTaGTTCAGCACCATCATGCTG +
Preference number: 4 (lower is better)
Translates to: CDCVVVSLVFNHVDRQEMSRLLN*FSTIML
Trigger: CAGCATGATGGTGCTGAATCAGTTGAGCAACCTGGA...CATTTCCTGCCTGTCGACATGGTTAAAAACGAGAGAAACAACAACACAGTCACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR TCA 90 bp CCTCTGCCCCTCCCCATCTCTGTCAAACACAGAGAAAGAATACTGCATTACAAATGTATGATGTCAGTATaGAGTGGGGGCTCTGACAAT +
Preference number: 4 (lower is better)
Translates to: PLPLPISVKHRERILHYKCMMSV*SGGSDN
Trigger: ATTGTCAGAGCCCCCACTTCATACTGACATCATACA...TTTGTAATGCAGTATTCTTTCTCTGTGTTTGACAGAGATGGGGAGGGGCAGAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR TCA 90 bp CCTCTGCCCCTCCCCATCTCTGTCAAACACAGAGAAAGAATACTGCATTACAAATGCTGGGAACAGTGTTaGGGTTCTTCAGTTGTTTCA +
Preference number: 4 (lower is better)
Translates to: PLPLPISVKHRERILHYKCWEQC*GSSVVS
Trigger: TGAAACAACTGAAGAACCTCAACACTGTTCCCAGCA...TTTGTAATGCAGTATTCTTTCTCTGTGTTTGACAGAGATGGGGAGGGGCAGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR TCA 90 bp CATCGTTTAGAGCATAACATGAGTTCCATACAGCAACTGTGGTATCCAGGTACCAACCAGGATAAATTCTaGGGACGCCATTGGGTGTTG +
Preference number: 4 (lower is better)
Translates to: HRLEHNMSSIQQLWYPGTNQDKF*GRHWVL
Trigger: CAACACCCAATGGCGTCCTCAGAATTTATCCTGGTT...GGTACCTGGATACCACAGTTGCTGTATGGAACTCATGTTATGCTCTAAACGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR TCA 90 bp TGTGACTGTGTTGTTGTTTCTCTCGTTTTTAACCATGTCGACAGGCAGGAAATGAGTCGCAGGTTTCGTTaGCAATGCCAACAAACGCGT +
Preference number: 4 (lower is better)
Translates to: CDCVVVSLVFNHVDRQEMSRRFR*QCQQTR
Trigger: ACGCGTTTGTTGGCATTGTCAACGAAACCTGCGACT...CATTTCCTGCCTGTCGACATGGTTAAAAACGAGAGAAACAACAACACAGTCACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR TCA 90 bp TTGGTGGATAATGTCTTGGCTAACTGGCAGCAGCTTTTAACCGTGATATTAAAACCATTCGGTGACAGTTaGGACAGAGTCGGTCCACCA +
Preference number: 4 (lower is better)
Translates to: LVDNVLANWQQLLTVILKPFGDS*DRVGPP
Trigger: TGGTGGACCGACTCTGTCTCAACTGTCACCGAATGG...TTTTAATATCACGGTTAAAAGCTGCTGCCAGTTAGCCAAGACATTATCCACCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR TCA 90 bp ACATATAAACGGAGATTTACCACACACATTCTTTACCATGGTGCAAGAATGCCTCCATTCGGTGACAGTTaGGACAGAGTCGGTCCACCA +
Preference number: 4 (lower is better)
Translates to: TYKRRFTTHILYHGARMPPFGDS*DRVGPP
Trigger: TGGTGGACCGACTCTGTCTCAACTGTCACCGAATGG...AGGCATTCTTGCACCATGGTAAAGAATGTGTGTGGTAAATCTCCGTTTATATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR TCA 90 bp ACATATAAACGGAGATTTACCACACACATTCTTTACCATGGTGCAAGAATGCCTATCACTTTCTGTTCCTaGTCGACCCCAGTAGCGGCG +
Preference number: 4 (lower is better)
Translates to: TYKRRFTTHILYHGARMPITFCS*STPVAA
Trigger: CGCCGCTACTGGGGTCGATCAGGAACAGAAAGTGAT...AGGCATTCTTGCACCATGGTAAAGAATGTGTGTGGTAAATCTCCGTTTATATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR TCA 90 bp GTTGTTGTTTCTCTCGTTTTTAACCATGTCGACAGGCAGGAAATGACTCAAACAAAGTGTAGGGTGGTGTaGCCGGTAGTGGTGGAACTT +
Preference number: 4 (lower is better)
Translates to: VVVSLVFNHVDRQEMTQTKCRVV*PVVVEL
Trigger: AAGTTCCACCACTACCGGTCACACCACCCTACACTT...TGTTTGAGTCATTTCCTGCCTGTCGACATGGTTAAAAACGAGAGAAACAACAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR TCA 90 bp TGTGACTGTGTTGTTGTTTCTCTCGTTTTTAACCATGTCGACAGGCAGGAAATGCCAGTTAAGGAGAGCTaGATGCTTCTGGCTCTTTGG +
Preference number: 4 (lower is better)
Translates to: CDCVVVSLVFNHVDRQEMPVKES*MLLALW
Trigger: CCAAAGAGCCAGAAGCATTCAGCTCTCCTTAACTGG...CATTTCCTGCCTGTCGACATGGTTAAAAACGAGAGAAACAACAACACAGTCACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR TCA 90 bp GCTAAGAAACAAAGCGAAATCTTCAATGCACACATTTGTATCTGCATGTGCCACACCTGTCTGCATCCCTaGAGAACTTTGGCCTCTCTG +
Preference number: 4 (lower is better)
Translates to: AKKQSEIFNAHICICMCHTCLHP*RTLASL
Trigger: CAGAGAGGCCAAAGTTCTTCAGGGATGCAGACAGGT...GTGGCACATGCAGATACAAATGTGTGCATTGAAGATTTCGCTTTGTTTCTTAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650260.1
CDS-3UTR TCA 90 bp TTGCAGGTTCCGTCTCTGTGTTTGGAGGTTCGCCTTCTGTTACCTTCCATTAGTTGTAAACAAAGGAGTTaGATATCCGCTCATTGGTGG +
Preference number: 4 (lower is better)
Translates to: LQVPSLCLEVRLLLPSISCKQRS*ISAHWW
Trigger: CCACCAATGAGCGGATATTCAACTCCTTTGTTTACA...ACTAATGGAAGGTAACAGAAGGCGAACCTCCAAACACAGAGACGGAACCTGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650260.1
CDS-3UTR GCA 90 bp GCTAAGAAACAAAGCGAAATCTTCAATGCACACATTTGTATCTGCATGTGCCACACTATGTGCTTTGACTaGGGCCGGACTGTAGAGACG +
Preference number: 4 (lower is better)
Translates to: AKKQSEIFNAHICICMCHTMCFD*GRTVET
Trigger: CGTCTCTACAGTCCGGCCGCAGTCAAAGCACATAGT...GTGGCACATGCAGATACAAATGTGTGCATTGAAGATTTCGCTTTGTTTCTTAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR GCA 90 bp GCTAAGAAACAAAGCGAAATCTTCAATGCACACATTTGTATCTGCATGTGCCACTGTAGTGCTCTACCATaGGCTTTGTCTCTGGCTGGC +
Preference number: 4 (lower is better)
Translates to: AKKQSEIFNAHICICMCHCSALP*ALSLAG
Trigger: GCCAGCCAGAGACAAAGCGCATGGTAGAGCACTACA...GTGGCACATGCAGATACAAATGTGTGCATTGAAGATTTCGCTTTGTTTCTTAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR GCA 90 bp CTGTTACCTTCCATTAGTGTTATGGCAGGTCTGTTCATCAGGCTTATTTCCCCTCCTAGTGGGATCAAATaGTTTGTCCATGAGGGAACC +
Preference number: 4 (lower is better)
Translates to: LLPSISVMAGLFIRLISPPSGIK*FVHEGT
Trigger: GGTTCCCTCATGGACAAAGCATTTGATCCCACTAGG...AGGGGAAATAAGCCTGATGAACAGACCTGCCATAACACTAATGGAAGGTAACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR GCA 90 bp TTGGTGGATAATGTCTTGGCTAACTGGCAGCAGCTTTTAACCGTGATATTAAAATCCTTGTGGGTGATGTaGTGCTGCTCCACAGGTGCA +
Preference number: 4 (lower is better)
Translates to: LVDNVLANWQQLLTVILKSLWVM*CCSTGA
Trigger: TGCACCTGTGGAGCAGCAGCACATCACCCACAAGGA...TTTTAATATCACGGTTAAAAGCTGCTGCCAGTTAGCCAAGACATTATCCACCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR GCA 90 bp ACATATAAACGGAGATTTACCACACACATTCTTTACCATGGTGCAAGAATGCCTTCCTTGTGGGTGATGTaGTGCTGCTCCACAGGTGCA +
Preference number: 4 (lower is better)
Translates to: TYKRRFTTHILYHGARMPSLWVM*CCSTGA
Trigger: TGCACCTGTGGAGCAGCAGCACATCACCCACAAGGA...AGGCATTCTTGCACCATGGTAAAGAATGTGTGTGGTAAATCTCCGTTTATATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR GCA 90 bp ACATATAAACGGAGATTTACCACACACATTCTTTACCATGGTGCAAGAATGCCTAGAGTCGGTCCACCATaGTGCAGGCACAGAAGGCAA +
Preference number: 4 (lower is better)
Translates to: TYKRRFTTHILYHGARMPRVGPP*CRHRRQ
Trigger: TTGCCTTCTGTGCCTGCAGCATGGTGGACCGACTCT...AGGCATTCTTGCACCATGGTAAAGAATGTGTGTGGTAAATCTCCGTTTATATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR GCA 90 bp TTGCAGGTTCCGTCTCTGTGTTTGGAGGTTCGCCTTCTGTTACCTTCCATTAGTAGATTGTTAGCATTCTaGATCGACAGTGTGTACCGT +
Preference number: 4 (lower is better)
Translates to: LQVPSLCLEVRLLLPSISRLLAF*IDSVYR
Trigger: ACGGTACACACTGTCGATGCAGAATGCTAACAATCT...ACTAATGGAAGGTAACAGAAGGCGAACCTCCAAACACAGAGACGGAACCTGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CCA 90 bp GCTAAGAAACAAAGCGAAATCTTCAATGCACACATTTGTATCTGCATGTGCCACAATCCCACTGCGTGCTaGGTAGGACTGTCTGAAGAC +
Preference number: 4 (lower is better)
Translates to: AKKQSEIFNAHICICMCHNPTAC*VGLSED
Trigger: GTCTTCAGACAGTCCTACCCAGCACGCAGTGGGATT...GTGGCACATGCAGATACAAATGTGTGCATTGAAGATTTCGCTTTGTTTCTTAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CCA 90 bp GCTAAGAAACAAAGCGAAATCTTCAATGCACACATTTGTATCTGCATGTGCCACAGAACCTGCCCACTGTaGTCTCCAGGTTGCTCAACT +
Preference number: 4 (lower is better)
Translates to: AKKQSEIFNAHICICMCHRTCPL*SPGCST
Trigger: AGTTGAGCAACCTGGAGACCACAGTGGGCAGGTTCT...GTGGCACATGCAGATACAAATGTGTGCATTGAAGATTTCGCTTTGTTTCTTAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CCA 90 bp AACATTAGGTTTCGTAGAAACCTAAGAATAGCATTGTACGAGGAGTGGAAACAAAGTGGAGGCAAGCACTaGGCTGGCCAAGGAGATCCA +
Preference number: 4 (lower is better)
Translates to: NIRFRRNLRIALYEEWKQSGGKH*AGQGDP
Trigger: TGGATCTCCTTGGCCAGCCCAGTGCTTGCCTCCACT...TTGTTTCCACTCCTCGTACAATGCTATTCTTAGGTTTCTACGAAACCTAATGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CCA 90 bp GTTGTTGTTTCTCTCGTTTTTAACCATGTCGACAGGCAGGAAATGACTCAAACACATGCGCTTTGTCTCTaGCTGGCTGAGGTGCTCATA +
Preference number: 4 (lower is better)
Translates to: VVVSLVFNHVDRQEMTQTHALCL*LAEVLI
Trigger: TATGAGCACCTCAGCCAGCCAGAGACAAAGCGCATG...TGTTTGAGTCATTTCCTGCCTGTCGACATGGTTAAAAACGAGAGAAACAACAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CCA 90 bp CATCGTTTAGAGCATAACATGAGTTCCATACAGCAACTGTGGTATCCAGGTACCCTGTATTTGGAACAGTaGCTGCCATGCACAAGGTTC +
Preference number: 4 (lower is better)
Translates to: HRLEHNMSSIQQLWYPGTLYLEQ*LPCTRF
Trigger: GAACCTTGTGCATGGCAGCCACTGTTCCAAATACAG...GGTACCTGGATACCACAGTTGCTGTATGGAACTCATGTTATGCTCTAAACGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CCA 90 bp AACATTAGGTTTCGTAGAAACCTAAGAATAGCATTGTACGAGGAGTGGAAACAAGGTGGACCTCGCAGCTaGGGTTTCGGTTCTCTGCAT +
Preference number: 4 (lower is better)
Translates to: NIRFRRNLRIALYEEWKQGGPRS*GFGSLH
Trigger: ATGCAGAGAACCGAAACCCCAGCTGCGAGGTCCACC...TTGTTTCCACTCCTCGTACAATGCTATTCTTAGGTTTCTACGAAACCTAATGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CCA 90 bp GTTGTTGTTTCTCTCGTTTTTAACCATGTCGACAGGCAGGAAATGACTCAAACACCTCCTGTGGGCTCATaGTGCTGTAACCATGATCAC +
Preference number: 4 (lower is better)
Translates to: VVVSLVFNHVDRQEMTQTPPVGS*CCNHDH
Trigger: GTGATCATGGTTACAGCACCATGAGCCCACAGGAGG...TGTTTGAGTCATTTCCTGCCTGTCGACATGGTTAAAAACGAGAGAAACAACAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CCA 90 bp GCTAAGAAACAAAGCGAAATCTTCAATGCACACATTTGTATCTGCATGTGCCACCCTCCTGTGGGCTCATaGTGCTGTAACCATGATCAC +
Preference number: 4 (lower is better)
Translates to: AKKQSEIFNAHICICMCHPPVGS*CCNHDH
Trigger: GTGATCATGGTTACAGCACCATGAGCCCACAGGAGG...GTGGCACATGCAGATACAAATGTGTGCATTGAAGATTTCGCTTTGTTTCTTAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CCA 90 bp GTTGTTGTTTCTCTCGTTTTTAACCATGTCGACAGGCAGGAAATGACTCAAACATTCACTGTCCTCCTGTaGGCTCATGGTGCTGTAACC +
Preference number: 4 (lower is better)
Translates to: VVVSLVFNHVDRQEMTQTFTVLL*AHGAVT
Trigger: GGTTACAGCACCATGAGCCCACAGGAGGACAGTGAA...TGTTTGAGTCATTTCCTGCCTGTCGACATGGTTAAAAACGAGAGAAACAACAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CCA 90 bp GCTAAGAAACAAAGCGAAATCTTCAATGCACACATTTGTATCTGCATGTGCCACTTCACTGTCCTCCTGTaGGCTCATGGTGCTGTAACC +
Preference number: 4 (lower is better)
Translates to: AKKQSEIFNAHICICMCHFTVLL*AHGAVT
Trigger: GGTTACAGCACCATGAGCCCACAGGAGGACAGTGAA...GTGGCACATGCAGATACAAATGTGTGCATTGAAGATTTCGCTTTGTTTCTTAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CCA 90 bp CCTCTGCCCCTCCCCATCTCTGTCAAACACAGAGAAAGAATACTGCATTACAAACTTCCATTAGTGTTATaGCAGGTCTGTTCATCAGGC +
Preference number: 4 (lower is better)
Translates to: PLPLPISVKHRERILHYKLPLVL*QVCSSG
Trigger: GCCTGATGAACAGACCTGCCATAACACTAATGGAAG...TTTGTAATGCAGTATTCTTTCTCTGTGTTTGACAGAGATGGGGAGGGGCAGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CCA 90 bp CTGTTACCTTCCATTAGTGTTATGGCAGGTCTGTTCATCAGGCTTATTTCCCCTTTCCGTCTCTGTGTTTaGAGGTTCGCCTTCTGTTAC +
Preference number: 4 (lower is better)
Translates to: LLPSISVMAGLFIRLISPFRLCV*RFAFCY
Trigger: GTAACAGAAGGCGAACCTCCAAACACAGAGACGGAA...AGGGGAAATAAGCCTGATGAACAGACCTGCCATAACACTAATGGAAGGTAACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CCA 90 bp CTGTTACCTTCCATTAGTGTTATGGCAGGTCTGTTCATCAGGCTTATTTCCCCTATGCTTCTGGCTCTTTaGAACATTCCTCTGGCTCAG +
Preference number: 4 (lower is better)
Translates to: LLPSISVMAGLFIRLISPMLLAL*NIPLAQ
Trigger: CTGAGCCAGAGGAATGTTCCAAAGAGCCAGAAGCAT...AGGGGAAATAAGCCTGATGAACAGACCTGCCATAACACTAATGGAAGGTAACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CCA 90 bp CTCTGCCCCTCCCCATCTCTGTCAAACACAGAGAAAGAATACTGCATTACAAACAGAGCTGAATGCTTCTaGCTCTTTGGAACATTCCTC +
Preference number: 4 (lower is better)
Translates to: LCPSPSLSNTEKEYCITNRAECF*LFGTFL
Trigger: GAGGAATGTTCCAAAGAGCCAGAAGCATTCAGCTCT...GTTTGTAATGCAGTATTCTTTCTCTGTGTTTGACAGAGATGGGGAGGGGCAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CCA 90 bp CATCGTTTAGAGCATAACATGAGTTCCATACAGCAACTGTGGTATCCAGGTACCTCCATACAGCAACTGTaGTATCCAGGTACCGCTAAG +
Preference number: 4 (lower is better)
Translates to: HRLEHNMSSIQQLWYPGTSIQQL*YPGTAK
Trigger: CTTAGCGGTACCTGGATACCACAGTTGCTGTATGGA...GGTACCTGGATACCACAGTTGCTGTATGGAACTCATGTTATGCTCTAAACGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CCA 90 bp CTCTGCCCCTCCCCATCTCTGTCAAACACAGAGAAAGAATACTGCATTACAAACAATGTCTTGGCTAACTaGCAGCAGCTTTTAACCGTG +
Preference number: 4 (lower is better)
Translates to: LCPSPSLSNTEKEYCITNNVLAN*QQLLTV
Trigger: CACGGTTAAAAGCTGCTGCCAGTTAGCCAAGACATT...GTTTGTAATGCAGTATTCTTTCTCTGTGTTTGACAGAGATGGGGAGGGGCAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CCA 90 bp TTGGTGGATAATGTCTTGGCTAACTGGCAGCAGCTTTTAACCGTGATATTAAAAGCAGACTGCAATGACTaGGCAGTTCCTCCACACACC +
Preference number: 4 (lower is better)
Translates to: LVDNVLANWQQLLTVILKADCND*AVPPHT
Trigger: GGTGTGTGGAGGAACTGCCCAGTCATTGCAGTCTGC...TTTTAATATCACGGTTAAAAGCTGCTGCCAGTTAGCCAAGACATTATCCACCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650260.1
3UTR CAA 72 bp CAACTCTGCACAAAGCACAAACACAAGGGAGGTCTCTaGCTGTGGGTTTTAAGCCGGTTCTTTTTCTTTCCA +
Preference number: 4 (lower is better)
Translates to: QLCTKHKHKGGL*LWVLSRFFFFP
Trigger: TGGAAAGAAAAAGAACCGGCTTAAAACCCACAGCAAGAGACCTCCCTTGTGTTTGTGCTTTGTGCAGAGTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR TCA 90 bp TGTGACTGTGTTGTTGTTTCTCTCGTTTTTAACCATGTCGACAGGCAGGAAATGCTTGCTTGTTCCGATTaGCCACATCCAAGTAACGGT +
Preference number: 4 (lower is better)
Translates to: CDCVVVSLVFNHVDRQEMLACSD*PHPSNG
Trigger: ACCGTTACTTGGATGTGGTCAATCGGAACAAGCAAG...CATTTCCTGCCTGTCGACATGGTTAAAAACGAGAGAAACAACAACACAGTCACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR TCA 90 bp TTCCAACTACATATAAACGGAGATTTACCACACACATTCTTTACCATGGTGCAACTGAGTGTCTGTGACTaGAGCCCCGTGGTCCAGAAT +
Preference number: 4 (lower is better)
Translates to: FQLHINGDLPHTFFTMVQLSVCD*SPVVQN
Trigger: ATTCTGGACCACGGGGCTTCAGTCACAGACACTCAG...TTGCACCATGGTAAAGAATGTGTGTGGTAAATCTCCGTTTATATGTAGTTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR TCA 90 bp TTGGTGGATAATGTCTTGGCTAACTGGCAGCAGCTTTTAACCGTGATATTAAAACAGAGAAGGGCAGGCTaGAGACGGCTTCATCAATCA +
Preference number: 4 (lower is better)
Translates to: LVDNVLANWQQLLTVILKQRRAG*RRLHQS
Trigger: TGATTGATGAAGCCGTCTTCAGCCTGCCCTTCTCTG...TTTTAATATCACGGTTAAAAGCTGCTGCCAGTTAGCCAAGACATTATCCACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR TCA 90 bp CTGTTACCTTCCATTAGTGTTATGGCAGGTCTGTTCATCAGGCTTATTTCCCCTTGTATGATGTCAGTATaGAGTGGGGGCTCTGACAAT +
Preference number: 4 (lower is better)
Translates to: LLPSISVMAGLFIRLISPCMMSV*SGGSDN
Trigger: ATTGTCAGAGCCCCCACTTCATACTGACATCATACA...AGGGGAAATAAGCCTGATGAACAGACCTGCCATAACACTAATGGAAGGTAACAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR TCA 90 bp TTCCAACTACATATAAACGGAGATTTACCACACACATTCTTTACCATGGTGCAATGCCAGCAGACAGCATaGTGGTGGGACTTTCTAGGG +
Preference number: 4 (lower is better)
Translates to: FQLHINGDLPHTFFTMVQCQQTA*WWDFLG
Trigger: CCCTAGAAAGTCCCACCATCATGCTGTCTGCTGGCA...TTGCACCATGGTAAAGAATGTGTGTGGTAAATCTCCGTTTATATGTAGTTGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR TCA 90 bp AACATTAGGTTTCGTAGAAACCTAAGAATAGCATTGTACGAGGAGTGGAAACAATGCCAGCAGACAGCATaGTGGTGGGACTTTCTAGGG +
Preference number: 4 (lower is better)
Translates to: NIRFRRNLRIALYEEWKQCQQTA*WWDFLG
Trigger: CCCTAGAAAGTCCCACCATCATGCTGTCTGCTGGCA...TTGTTTCCACTCCTCGTACAATGCTATTCTTAGGTTTCTACGAAACCTAATGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR TCA 90 bp CTCTGCCCCTCCCCATCTCTGTCAAACACAGAGAAAGAATACTGCATTACAAACCAAATGCTTTGTCCATaGGGGAACCAGGATAAATTC +
Preference number: 4 (lower is better)
Translates to: LCPSPSLSNTEKEYCITNQMLCP*GNQDKF
Trigger: GAATTTATCCTGGTTCCCTCATGGACAAAGCATTTG...GTTTGTAATGCAGTATTCTTTCTCTGTGTTTGACAGAGATGGGGAGGGGCAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR TCA 90 bp CTCTGCCCCTCCCCATCTCTGTCAAACACAGAGAAAGAATACTGCATTACAAACCAGCTGTGTACTGGATaGATGAATTGTGTGACTGAT +
Preference number: 4 (lower is better)
Translates to: LCPSPSLSNTEKEYCITNQLCTG*MNCVTD
Trigger: ATCAGTCACACAATTCATTCATCCAGTACACAGCTG...GTTTGTAATGCAGTATTCTTTCTCTGTGTTTGACAGAGATGGGGAGGGGCAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR TCA 90 bp CTGTTACCTTCCATTAGTGTTATGGCAGGTCTGTTCATCAGGCTTATTTCCCCTCCCTGTCCTCCATTATaGAGCACCTTATTTTGTTGC +
Preference number: 4 (lower is better)
Translates to: LLPSISVMAGLFIRLISPPCPPL*STLFCC
Trigger: GCAACAAAATAAGGTGCTTCATAATGGAGGACAGGG...AGGGGAAATAAGCCTGATGAACAGACCTGCCATAACACTAATGGAAGGTAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR TCA 90 bp TTCCAACTACATATAAACGGAGATTTACCACACACATTCTTTACCATGGTGCAATGCCAGTGCACTCATTaGCCTCTAGAGGGCACTCAC +
Preference number: 4 (lower is better)
Translates to: FQLHINGDLPHTFFTMVQCQCTH*PLEGTH
Trigger: GTGAGTGCCCTCTAGAGGTCAATGAGTGCACTGGCA...TTGCACCATGGTAAAGAATGTGTGTGGTAAATCTCCGTTTATATGTAGTTGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR TCA 90 bp ACATATAAACGGAGATTTACCACACACATTCTTTACCATGGTGCAAGAATGCCTGGTTCTCTGCATTGGTaGGGTTGCCAGTGCACTCAT +
Preference number: 4 (lower is better)
Translates to: TYKRRFTTHILYHGARMPGSLHW*GCQCTH
Trigger: ATGAGTGCACTGGCAACCTCACCAATGCAGAGAACC...AGGCATTCTTGCACCATGGTAAAGAATGTGTGTGGTAAATCTCCGTTTATATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR TCA 90 bp TTGGTGGATAATGTCTTGGCTAACTGGCAGCAGCTTTTAACCGTGATATTAAAACTGTTGACACACTGGTaGAGAGCATCTTGCAGGCCA +
Preference number: 4 (lower is better)
Translates to: LVDNVLANWQQLLTVILKLLTHW*RASCRP
Trigger: TGGCCTGCAAGATGCTCTTCACCAGTGTGTCAACAG...TTTTAATATCACGGTTAAAAGCTGCTGCCAGTTAGCCAAGACATTATCCACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR TCA 90 bp GCTAAGAAACAAAGCGAAATCTTCAATGCACACATTTGTATCTGCATGTGCCACGTTGGACATACGCACTaGCATTTCTTGGGCAGCAAG +
Preference number: 4 (lower is better)
Translates to: AKKQSEIFNAHICICMCHVGHTH*HFLGSK
Trigger: CTTGCTGCCCAAGAAATGTCAGTGCGTATGTCCAAC...GTGGCACATGCAGATACAAATGTGTGCATTGAAGATTTCGCTTTGTTTCTTAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR TCA 90 bp AACATTAGGTTTCGTAGAAACCTAAGAATAGCATTGTACGAGGAGTGGAAACAAATCACTTTCTGTTCCTaGTCGACCCCAGTAGCGGCG +
Preference number: 4 (lower is better)
Translates to: NIRFRRNLRIALYEEWKQITFCS*STPVAA
Trigger: CGCCGCTACTGGGGTCGATCAGGAACAGAAAGTGAT...TTGTTTCCACTCCTCGTACAATGCTATTCTTAGGTTTCTACGAAACCTAATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR TCA 90 bp TTGGTGGATAATGTCTTGGCTAACTGGCAGCAGCTTTTAACCGTGATATTAAAAAAGTGTAGGGTGGTGTaGCCGGTAGTGGTGGAACTT +
Preference number: 4 (lower is better)
Translates to: LVDNVLANWQQLLTVILKKCRVV*PVVVEL
Trigger: AAGTTCCACCACTACCGGTCACACCACCCTACACTT...TTTTAATATCACGGTTAAAAGCTGCTGCCAGTTAGCCAAGACATTATCCACCAA
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR TCA 90 bp GCTAAGAAACAAAGCGAAATCTTCAATGCACACATTTGTATCTGCATGTGCCACCAACCCTCCCTTAGCTaGAAGGATGCGGTTCTAACA +
Preference number: 4 (lower is better)
Translates to: AKKQSEIFNAHICICMCHQPSLS*KDAVLT
Trigger: TGTTAGAACCGCATCCTTTCAGCTAAGGGAGGGTTG...GTGGCACATGCAGATACAAATGTGTGCATTGAAGATTTCGCTTTGTTTCTTAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR GCA 90 bp CTCTGCCCCTCCCCATCTCTGTCAAACACAGAGAAAGAATACTGCATTACAAACGATGCTTCTACAACTTaGTTGTTCCGATTGACCACA +
Preference number: 4 (lower is better)
Translates to: LCPSPSLSNTEKEYCITNDASTT*LFRLTT
Trigger: TGTGGTCAATCGGAACAAGCAAGTTGTAGAAGCATC...GTTTGTAATGCAGTATTCTTTCTCTGTGTTTGACAGAGATGGGGAGGGGCAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR GCA 90 bp CCTCTGCCCCTCCCCATCTCTGTCAAACACAGAGAAAGAATACTGCATTACAAAGTGAGCCGTATAGGATaGTTCTACAACTTGCTTGTT +
Preference number: 4 (lower is better)
Translates to: PLPLPISVKHRERILHYKVSRIG*FYNLLV
Trigger: AACAAGCAAGTTGTAGAAGCATCCTATACGGCTCAC...TTTGTAATGCAGTATTCTTTCTCTGTGTTTGACAGAGATGGGGAGGGGCAGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR GCA 90 bp CCTCTGCCCCTCCCCATCTCTGTCAAACACAGAGAAAGAATACTGCATTACAAAACACCGGAACTTGTGTaGTGGGAAAACAGTGAAAAT +
Preference number: 4 (lower is better)
Translates to: PLPLPISVKHRERILHYKTPELV*WENSEN
Trigger: ATTTTCACTGTTTTCCCAGCACACAAGTTCCGGTGT...TTTGTAATGCAGTATTCTTTCTCTGTGTTTGACAGAGATGGGGAGGGGCAGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR GCA 90 bp ACATATAAACGGAGATTTACCACACACATTCTTTACCATGGTGCAAGAATGCCTTGCGGTGTTCGTAGCTaGCCTTACACCGGAACTTGT +
Preference number: 4 (lower is better)
Translates to: TYKRRFTTHILYHGARMPCGVRS*PYTGTC
Trigger: ACAAGTTCCGGTGTAAGGGCAGCTACGAACACCGCA...AGGCATTCTTGCACCATGGTAAAGAATGTGTGTGGTAAATCTCCGTTTATATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR GCA 90 bp TTCCAACTACATATAAACGGAGATTTACCACACACATTCTTTACCATGGTGCAACGTAGATGGGTCTACTaGGGTGTTCGTAGCTGCCCT +
Preference number: 4 (lower is better)
Translates to: FQLHINGDLPHTFFTMVQRRWVY*GVRSCP
Trigger: AGGGCAGCTACGAACACCGCAGTAGACCCATCTACG...TTGCACCATGGTAAAGAATGTGTGTGGTAAATCTCCGTTTATATGTAGTTGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR GCA 90 bp TTGGTGGATAATGTCTTGGCTAACTGGCAGCAGCTTTTAACCGTGATATTAAAAACTATGTGCTTTGACTaGGGCCGGACTGTAGAGACG +
Preference number: 4 (lower is better)
Translates to: LVDNVLANWQQLLTVILKTMCFD*GRTVET
Trigger: CGTCTCTACAGTCCGGCCGCAGTCAAAGCACATAGT...TTTTAATATCACGGTTAAAAGCTGCTGCCAGTTAGCCAAGACATTATCCACCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR GCA 90 bp TTGGTGGATAATGTCTTGGCTAACTGGCAGCAGCTTTTAACCGTGATATTAAAATGGAATCCCACTGCGTaGTGGGTAGGACTGTCTGAA +
Preference number: 4 (lower is better)
Translates to: LVDNVLANWQQLLTVILKWNPTA*WVGLSE
Trigger: TTCAGACAGTCCTACCCAGCACGCAGTGGGATTCCA...TTTTAATATCACGGTTAAAAGCTGCTGCCAGTTAGCCAAGACATTATCCACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR GCA 90 bp TTGGTGGATAATGTCTTGGCTAACTGGCAGCAGCTTTTAACCGTGATATTAAAATGTAGTGCTCTACCATaGGCTTTGTCTCTGGCTGGC +
Preference number: 4 (lower is better)
Translates to: LVDNVLANWQQLLTVILKCSALP*ALSLAG
Trigger: GCCAGCCAGAGACAAAGCGCATGGTAGAGCACTACA...TTTTAATATCACGGTTAAAAGCTGCTGCCAGTTAGCCAAGACATTATCCACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR GCA 90 bp TTCCAACTACATATAAACGGAGATTTACCACACACATTCTTTACCATGGTGCAACTGCTGCTCCACAGGTaGATGTCCTTTGGGGTCGAT +
Preference number: 4 (lower is better)
Translates to: FQLHINGDLPHTFFTMVQLLLHR*MSFGVD
Trigger: ATCGACCCCAAAGGACATGCACCTGTGGAGCAGCAG...TTGCACCATGGTAAAGAATGTGTGTGGTAAATCTCCGTTTATATGTAGTTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR GCA 90 bp GCTAAGAAACAAAGCGAAATCTTCAATGCACACATTTGTATCTGCATGTGCCACGAACAGTGGCTGCCATaGACAAGGTTCGTCAAATCC +
Preference number: 4 (lower is better)
Translates to: AKKQSEIFNAHICICMCHEQWLP*TRFVKS
Trigger: GGATTTGACGAACCTTGTGCATGGCAGCCACTGTTC...GTGGCACATGCAGATACAAATGTGTGCATTGAAGATTTCGCTTTGTTTCTTAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR GCA 90 bp TGTGACTGTGTTGTTGTTTCTCTCGTTTTTAACCATGTCGACAGGCAGGAAATGATTTGGAACAGTGGCTaGCATGCACAAGGTTCGTCA +
Preference number: 4 (lower is better)
Translates to: CDCVVVSLVFNHVDRQEMIWNSG*HAQGSS
Trigger: TGACGAACCTTGTGCATGGCAGCCACTGTTCCAAAT...CATTTCCTGCCTGTCGACATGGTTAAAAACGAGAGAAACAACAACACAGTCACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR GCA 90 bp CCTCTGCCCCTCCCCATCTCTGTCAAACACAGAGAAAGAATACTGCATTACAAAACAAGGGGTCATTGTTaGATGGAGGATTTTCACTGT +
Preference number: 4 (lower is better)
Translates to: PLPLPISVKHRERILHYKTRGHC*MEDFHC
Trigger: ACAGTGAAAATCCTCCATGCAACAATGACCCCTTGT...TTTGTAATGCAGTATTCTTTCTCTGTGTTTGACAGAGATGGGGAGGGGCAGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR GCA 90 bp CTCTGCCCCTCCCCATCTCTGTCAAACACAGAGAAAGAATACTGCATTACAAACAGATTGTTAGCATTCTaGATCGACAGTGTGTACCGT +
Preference number: 4 (lower is better)
Translates to: LCPSPSLSNTEKEYCITNRLLAF*IDSVYR
Trigger: ACGGTACACACTGTCGATGCAGAATGCTAACAATCT...GTTTGTAATGCAGTATTCTTTCTCTGTGTTTGACAGAGATGGGGAGGGGCAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR GCA 90 bp CTCTGCCCCTCCCCATCTCTGTCAAACACAGAGAAAGAATACTGCATTACAAACTTAAGGAGAGCTGAATaGTTCTGGCTCTTTGGAACA +
Preference number: 4 (lower is better)
Translates to: LCPSPSLSNTEKEYCITNLRRAE*FWLFGT
Trigger: TGTTCCAAAGAGCCAGAAGCATTCAGCTCTCCTTAA...GTTTGTAATGCAGTATTCTTTCTCTGTGTTTGACAGAGATGGGGAGGGGCAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR GCA 90 bp CATCGTTTAGAGCATAACATGAGTTCCATACAGCAACTGTGGTATCCAGGTACCGCACACATTTGTATCTaGATGTGCCACATTCCAGTC +
Preference number: 4 (lower is better)
Translates to: HRLEHNMSSIQQLWYPGTAHICI*MCHIPV
Trigger: GACTGGAATGTGGCACATGCAGATACAAATGTGTGC...GGTACCTGGATACCACAGTTGCTGTATGGAACTCATGTTATGCTCTAAACGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CCA 90 bp CATCGTTTAGAGCATAACATGAGTTCCATACAGCAACTGTGGTATCCAGGTACCCCGGAACTTGTGTGCTaGGAAAACAGTGAAAATTCC +
Preference number: 4 (lower is better)
Translates to: HRLEHNMSSIQQLWYPGTPELVC*ENSENS
Trigger: GGAATTTTCACTGTTTTCCCAGCACACAAGTTCCGG...GGTACCTGGATACCACAGTTGCTGTATGGAACTCATGTTATGCTCTAAACGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CCA 90 bp GCTAAGAAACAAAGCGAAATCTTCAATGCACACATTTGTATCTGCATGTGCCACGTGACTGAAGCCCCGTaGTCCAGAATCACTACTATG +
Preference number: 4 (lower is better)
Translates to: AKKQSEIFNAHICICMCHVTEAP*SRITTM
Trigger: CATAGTAGTGATTCTGGACCACGGGGCTTCAGTCAC...GTGGCACATGCAGATACAAATGTGTGCATTGAAGATTTCGCTTTGTTTCTTAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CCA 90 bp ACATATAAACGGAGATTTACCACACACATTCTTTACCATGGTGCAAGAATGCCTCCTGAGCAGCGTCCTTaGCAATCTGAAGCTGAGTGT +
Preference number: 4 (lower is better)
Translates to: TYKRRFTTHILYHGARMPPEQRP*QSEAEC
Trigger: ACACTCAGCTTCAGATTGCCAAGGACGCTGCTCAGG...AGGCATTCTTGCACCATGGTAAAGAATGTGTGTGGTAAATCTCCGTTTATATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CCA 90 bp CTGTTACCTTCCATTAGTGTTATGGCAGGTCTGTTCATCAGGCTTATTTCCCCTCATCAATCATCCGGTTaGGAAGGTTTGTGTAGAACC +
Preference number: 4 (lower is better)
Translates to: LLPSISVMAGLFIRLISPHQSSG*EGLCRT
Trigger: GGTTCTACACAAACCTTCCCAACCGGATGATTGATG...AGGGGAAATAAGCCTGATGAACAGACCTGCCATAACACTAATGGAAGGTAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CCA 90 bp CTGTTACCTTCCATTAGTGTTATGGCAGGTCTGTTCATCAGGCTTATTTCCCCTTGGCCTGGTAAGAGATaGGTGCATAAGTGTATATCC +
Preference number: 4 (lower is better)
Translates to: LLPSISVMAGLFIRLISPWPGKR*VHKCIS
Trigger: GGATATACACTTATGCACCCATCTCTTACCAGGCCA...AGGGGAAATAAGCCTGATGAACAGACCTGCCATAACACTAATGGAAGGTAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CCA 90 bp CATCGTTTAGAGCATAACATGAGTTCCATACAGCAACTGTGGTATCCAGGTACCCATTCATCTGTGACGTaGCTGGTAGCCATTACTTCA +
Preference number: 4 (lower is better)
Translates to: HRLEHNMSSIQQLWYPGTHSSVT*LVAITS
Trigger: TGAAGTAATGGCTACCAGCCACGTCACAGATGAATG...GGTACCTGGATACCACAGTTGCTGTATGGAACTCATGTTATGCTCTAAACGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CCA 90 bp TTGCAGGTTCCGTCTCTGTGTTTGGAGGTTCGCCTTCTGTTACCTTCCATTAGTAAGACAGCTGTGTACTaGATGAATGAATTGTGTGAC +
Preference number: 4 (lower is better)
Translates to: LQVPSLCLEVRLLLPSISKTAVY*MNELCD
Trigger: GTCACACAATTCATTCATCCAGTACACAGCTGTCTT...ACTAATGGAAGGTAACAGAAGGCGAACCTCCAAACACAGAGACGGAACCTGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CCA 90 bp GCTAAGAAACAAAGCGAAATCTTCAATGCACACATTTGTATCTGCATGTGCCACTGCCAACAAACGCGTTaGTTCCTGGGATCCTTGCTA +
Preference number: 4 (lower is better)
Translates to: AKKQSEIFNAHICICMCHCQQTR*FLGSLL
Trigger: TAGCAAGGATCCCAGGAACCAACGCGTTTGTTGGCA...GTGGCACATGCAGATACAAATGTGTGCATTGAAGATTTCGCTTTGTTTCTTAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CCA 90 bp TTGGTGGATAATGTCTTGGCTAACTGGCAGCAGCTTTTAACCGTGATATTAAAAATGCCTCTGTCTTCGTaGCTGTCGTCGTCCCTTTCA +
Preference number: 4 (lower is better)
Translates to: LVDNVLANWQQLLTVILKMPLSS*LSSSLS
Trigger: TGAAAGGGACGACGACAGCCACGAAGACAGAGGCAT...TTTTAATATCACGGTTAAAAGCTGCTGCCAGTTAGCCAAGACATTATCCACCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CCA 90 bp AACATTAGGTTTCGTAGAAACCTAAGAATAGCATTGTACGAGGAGTGGAAACAAGCGGCGCCTTCTTTCTaGACTGTGTGCATGTCGTTC +
Preference number: 4 (lower is better)
Translates to: NIRFRRNLRIALYEEWKQAAPSF*TVCMSF
Trigger: GAACGACATGCACACAGTCCAGAAAGAAGGCGCCGC...TTGTTTCCACTCCTCGTACAATGCTATTCTTAGGTTTCTACGAAACCTAATGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CCA 90 bp TTCCAACTACATATAAACGGAGATTTACCACACACATTCTTTACCATGGTGCAAGCGGCGCCTTCTTTCTaGACTGTGTGCATGTCGTTC +
Preference number: 4 (lower is better)
Translates to: FQLHINGDLPHTFFTMVQAAPSF*TVCMSF
Trigger: GAACGACATGCACACAGTCCAGAAAGAAGGCGCCGC...TTGCACCATGGTAAAGAATGTGTGTGGTAAATCTCCGTTTATATGTAGTTGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CCA 90 bp GCTAAGAAACAAAGCGAAATCTTCAATGCACACATTTGTATCTGCATGTGCCACTCTAAGTCCTCATCATaGTTTCCCACATCGACCCCG +
Preference number: 4 (lower is better)
Translates to: AKKQSEIFNAHICICMCHSKSSS*FPTSTP
Trigger: CGGGGTCGATGTGGGAAACCATGATGAGGACTTAGA...GTGGCACATGCAGATACAAATGTGTGCATTGAAGATTTCGCTTTGTTTCTTAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CCA 90 bp GTTGTTGTTTCTCTCGTTTTTAACCATGTCGACAGGCAGGAAATGACTCAAACATCCCAGATCTCATCTTaGCGTGGAGGTGAGGAGATT +
Preference number: 4 (lower is better)
Translates to: VVVSLVFNHVDRQEMTQTSQISS*RGGEEI
Trigger: AATCTCCTCACCTCCACGCCAAGATGAGATCTGGGA...TGTTTGAGTCATTTCCTGCCTGTCGACATGGTTAAAAACGAGAGAAACAACAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CCA 90 bp TGTGACTGTGTTGTTGTTTCTCTCGTTTTTAACCATGTCGACAGGCAGGAAATGTTCCGTCTCTGTGTTTaGAGGTTCGCCTTCTGTTAC +
Preference number: 4 (lower is better)
Translates to: CDCVVVSLVFNHVDRQEMFRLCV*RFAFCY
Trigger: GTAACAGAAGGCGAACCTCCAAACACAGAGACGGAA...CATTTCCTGCCTGTCGACATGGTTAAAAACGAGAGAAACAACAACACAGTCACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CCA 90 bp CATCGTTTAGAGCATAACATGAGTTCCATACAGCAACTGTGGTATCCAGGTACCCCACATTCCAGTCTCTaGGTGAGCAGATTTTTCTCT +
Preference number: 4 (lower is better)
Translates to: HRLEHNMSSIQQLWYPGTPHSSL*VSRFFS
Trigger: AGAGAAAAATCTGCTCACCCAGAGACTGGAATGTGG...GGTACCTGGATACCACAGTTGCTGTATGGAACTCATGTTATGCTCTAAACGATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CCA 90 bp CATCGTTTAGAGCATAACATGAGTTCCATACAGCAACTGTGGTATCCAGGTACCTCCTATTTTGTGGAGTaGGGCAGTGGGATATCAGTT +
Preference number: 4 (lower is better)
Translates to: HRLEHNMSSIQQLWYPGTSYFVE*GSGISV
Trigger: AACTGATATCCCACTGCCCCACTCCACAAAATAGGA...GGTACCTGGATACCACAGTTGCTGTATGGAACTCATGTTATGCTCTAAACGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR TCA 90 bp AACATTAGGTTTCGTAGAAACCTAAGAATAGCATTGTACGAGGAGTGGAAACAACAGAGAAGGGCAGGCTaGAGACGGCTTCATCAATCA +
Preference number: 4 (lower is better)
Translates to: NIRFRRNLRIALYEEWKQQRRAG*RRLHQS
Trigger: TGATTGATGAAGCCGTCTTCAGCCTGCCCTTCTCTG...TTGTTTCCACTCCTCGTACAATGCTATTCTTAGGTTTCTACGAAACCTAATGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR TCA 90 bp CTGTTACCTTCCATTAGTGTTATGGCAGGTCTGTTCATCAGGCTTATTTCCCCTCAGCTGTGTACTGGATaGATGAATTGTGTGACTGAT +
Preference number: 4 (lower is better)
Translates to: LLPSISVMAGLFIRLISPQLCTG*MNCVTD
Trigger: ATCAGTCACACAATTCATTCATCCAGTACACAGCTG...AGGGGAAATAAGCCTGATGAACAGACCTGCCATAACACTAATGGAAGGTAACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR TCA 90 bp TGTGACTGTGTTGTTGTTTCTCTCGTTTTTAACCATGTCGACAGGCAGGAAATGCCCTGTCCTCCATTATaGAGCACCTTATTTTGTTGC +
Preference number: 4 (lower is better)
Translates to: CDCVVVSLVFNHVDRQEMPCPPL*STLFCC
Trigger: GCAACAAAATAAGGTGCTTCATAATGGAGGACAGGG...CATTTCCTGCCTGTCGACATGGTTAAAAACGAGAGAAACAACAACACAGTCACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR TCA 90 bp TGTGACTGTGTTGTTGTTTCTCTCGTTTTTAACCATGTCGACAGGCAGGAAATGCAAAGTTGGGGTGGTTaGGGATATCATTTGCTACCA +
Preference number: 4 (lower is better)
Translates to: CDCVVVSLVFNHVDRQEMQSWGG*GYHLLP
Trigger: TGGTAGCAAATGATATCCTCAACCACCCCAACTTTG...CATTTCCTGCCTGTCGACATGGTTAAAAACGAGAGAAACAACAACACAGTCACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR TCA 90 bp ACATATAAACGGAGATTTACCACACACATTCTTTACCATGGTGCAAGAATGCCTAGTCGCAGGTTTCGTTaGCAATGCCAACAAACGCGT +
Preference number: 4 (lower is better)
Translates to: TYKRRFTTHILYHGARMPSRRFR*QCQQTR
Trigger: ACGCGTTTGTTGGCATTGTCAACGAAACCTGCGACT...AGGCATTCTTGCACCATGGTAAAGAATGTGTGTGGTAAATCTCCGTTTATATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR TCA 90 bp GCTAAGAAACAAAGCGAAATCTTCAATGCACACATTTGTATCTGCATGTGCCACTTTTGTTCCATTCGGTaGCAGTTGAGACAGAGTCGG +
Preference number: 4 (lower is better)
Translates to: AKKQSEIFNAHICICMCHFCSIR*QLRQSR
Trigger: CCGACTCTGTCTCAACTGTCACCGAATGGAACAAAA...GTGGCACATGCAGATACAAATGTGTGCATTGAAGATTTCGCTTTGTTTCTTAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR TCA 90 bp TTCCAACTACATATAAACGGAGATTTACCACACACATTCTTTACCATGGTGCAACTGTTGACACACTGGTaGAGAGCATCTTGCAGGCCA +
Preference number: 4 (lower is better)
Translates to: FQLHINGDLPHTFFTMVQLLTHW*RASCRP
Trigger: TGGCCTGCAAGATGCTCTTCACCAGTGTGTCAACAG...TTGCACCATGGTAAAGAATGTGTGTGGTAAATCTCCGTTTATATGTAGTTGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR TCA 90 bp ACATATAAACGGAGATTTACCACACACATTCTTTACCATGGTGCAAGAATGCCTGTTGGACATACGCACTaGCATTTCTTGGGCAGCAAG +
Preference number: 4 (lower is better)
Translates to: TYKRRFTTHILYHGARMPVGHTH*HFLGSK
Trigger: CTTGCTGCCCAAGAAATGTCAGTGCGTATGTCCAAC...AGGCATTCTTGCACCATGGTAAAGAATGTGTGTGGTAAATCTCCGTTTATATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR TCA 90 bp TTCCAACTACATATAAACGGAGATTTACCACACACATTCTTTACCATGGTGCAAAAGTGTAGGGTGGTGTaGCCGGTAGTGGTGGAACTT +
Preference number: 4 (lower is better)
Translates to: FQLHINGDLPHTFFTMVQKCRVV*PVVVEL
Trigger: AAGTTCCACCACTACCGGTCACACCACCCTACACTT...TTGCACCATGGTAAAGAATGTGTGTGGTAAATCTCCGTTTATATGTAGTTGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR TCA 90 bp TTGCAGGTTCCGTCTCTGTGTTTGGAGGTTCGCCTTCTGTTACCTTCCATTAGTACATCTTCACAAATGTaGCTGTGTTGTTGTTTCTCT +
Preference number: 4 (lower is better)
Translates to: LQVPSLCLEVRLLLPSISTSSQM*LCCCFS
Trigger: AGAGAAACAACAACACAGTCACATTTGTGAAGATGT...ACTAATGGAAGGTAACAGAAGGCGAACCTCCAAACACAGAGACGGAACCTGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR TCA 90 bp ACATATAAACGGAGATTTACCACACACATTCTTTACCATGGTGCAAGAATGCCTCCAGTTAAGGAGAGCTaGATGCTTCTGGCTCTTTGG +
Preference number: 4 (lower is better)
Translates to: TYKRRFTTHILYHGARMPPVKES*MLLALW
Trigger: CCAAAGAGCCAGAAGCATTCAGCTCTCCTTAACTGG...AGGCATTCTTGCACCATGGTAAAGAATGTGTGTGGTAAATCTCCGTTTATATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR GCA 90 bp CTGTTACCTTCCATTAGTGTTATGGCAGGTCTGTTCATCAGGCTTATTTCCCCTGATGCTTCTACAACTTaGTTGTTCCGATTGACCACA +
Preference number: 4 (lower is better)
Translates to: LLPSISVMAGLFIRLISPDASTT*LFRLTT
Trigger: TGTGGTCAATCGGAACAAGCAAGTTGTAGAAGCATC...AGGGGAAATAAGCCTGATGAACAGACCTGCCATAACACTAATGGAAGGTAACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR GCA 90 bp CATCGTTTAGAGCATAACATGAGTTCCATACAGCAACTGTGGTATCCAGGTACCGTGAGCCGTATAGGATaGTTCTACAACTTGCTTGTT +
Preference number: 4 (lower is better)
Translates to: HRLEHNMSSIQQLWYPGTVSRIG*FYNLLV
Trigger: AACAAGCAAGTTGTAGAAGCATCCTATACGGCTCAC...GGTACCTGGATACCACAGTTGCTGTATGGAACTCATGTTATGCTCTAAACGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR GCA 90 bp GCTAAGAAACAAAGCGAAATCTTCAATGCACACATTTGTATCTGCATGTGCCACAGAATCACTACTATGTaGTTTGACTGCGGCCGGACT +
Preference number: 4 (lower is better)
Translates to: AKKQSEIFNAHICICMCHRITTM*FDCGRT
Trigger: AGTCCGGCCGCAGTCAAAGCACATAGTAGTGATTCT...GTGGCACATGCAGATACAAATGTGTGCATTGAAGATTTCGCTTTGTTTCTTAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR GCA 90 bp TGTGACTGTGTTGTTGTTTCTCTCGTTTTTAACCATGTCGACAGGCAGGAAATGTCGAATCAGCTGAAATaGCTTTTGGAATCCCACTGC +
Preference number: 4 (lower is better)
Translates to: CDCVVVSLVFNHVDRQEMSNQLK*LLESHC
Trigger: GCAGTGGGATTCCAAAAGGCATTTCAGCTGATTCGA...CATTTCCTGCCTGTCGACATGGTTAAAAACGAGAGAAACAACAACACAGTCACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR GCA 90 bp TTGGTGGATAATGTCTTGGCTAACTGGCAGCAGCTTTTAACCGTGATATTAAAACTGTGGTCTCCAGGTTaGTCAACTGATTCAGCACCA +
Preference number: 4 (lower is better)
Translates to: LVDNVLANWQQLLTVILKLWSPG*STDSAP
Trigger: TGGTGCTGAATCAGTTGAGCAACCTGGAGACCACAG...TTTTAATATCACGGTTAAAAGCTGCTGCCAGTTAGCCAAGACATTATCCACCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR GCA 90 bp AACATTAGGTTTCGTAGAAACCTAAGAATAGCATTGTACGAGGAGTGGAAACAAGGTTTGTGTAGAACCTaGCCACTGTGGTCTCCAGGT +
Preference number: 4 (lower is better)
Translates to: NIRFRRNLRIALYEEWKQGLCRT*PLWSPG
Trigger: ACCTGGAGACCACAGTGGGCAGGTTCTACACAAACC...TTGTTTCCACTCCTCGTACAATGCTATTCTTAGGTTTCTACGAAACCTAATGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR GCA 90 bp CCTCTGCCCCTCCCCATCTCTGTCAAACACAGAGAAAGAATACTGCATTACAAACTGGTAAGAGATGGGTaGATAAGTGTATATCCTTTG +
Preference number: 4 (lower is better)
Translates to: PLPLPISVKHRERILHYKLVRDG*ISVYPL
Trigger: CAAAGGATATACACTTATGCACCCATCTCTTACCAG...TTTGTAATGCAGTATTCTTTCTCTGTGTTTGACAGAGATGGGGAGGGGCAGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR GCA 90 bp ACATATAAACGGAGATTTACCACACACATTCTTTACCATGGTGCAAGAATGCCTGACGCCATTGGGTGTTaGTATGTAACGGCGGACAAT +
Preference number: 4 (lower is better)
Translates to: TYKRRFTTHILYHGARMPDAIGC*YVTADN
Trigger: ATTGTCCGCCGTTACATAGCAACACCCAATGGCGTC...AGGCATTCTTGCACCATGGTAAAGAATGTGTGTGGTAAATCTCCGTTTATATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR GCA 90 bp GCTAAGAAACAAAGCGAAATCTTCAATGCACACATTTGTATCTGCATGTGCCACCCTAGTGGGATCAAATaGTTTGTCCATGAGGGAACC +
Preference number: 4 (lower is better)
Translates to: AKKQSEIFNAHICICMCHPSGIK*FVHEGT
Trigger: GGTTCCCTCATGGACAAAGCATTTGATCCCACTAGG...GTGGCACATGCAGATACAAATGTGTGCATTGAAGATTTCGCTTTGTTTCTTAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR GCA 90 bp GTTGTTGTTTCTCTCGTTTTTAACCATGTCGACAGGCAGGAAATGACTCAAACAGTTGAGGATATCATTTaGTACCAGGGGCTCCTTGTG +
Preference number: 4 (lower is better)
Translates to: VVVSLVFNHVDRQEMTQTVEDII*YQGLLV
Trigger: CACAAGGAGCCCCTGGTAGCAAATGATATCCTCAAC...TGTTTGAGTCATTTCCTGCCTGTCGACATGGTTAAAAACGAGAGAAACAACAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR GCA 90 bp ACATATAAACGGAGATTTACCACACACATTCTTTACCATGGTGCAAGAATGCCTGAACAGTGGCTGCCATaGACAAGGTTCGTCAAATCC +
Preference number: 4 (lower is better)
Translates to: TYKRRFTTHILYHGARMPEQWLP*TRFVKS
Trigger: GGATTTGACGAACCTTGTGCATGGCAGCCACTGTTC...AGGCATTCTTGCACCATGGTAAAGAATGTGTGTGGTAAATCTCCGTTTATATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR GCA 90 bp GTTGTTGTTTCTCTCGTTTTTAACCATGTCGACAGGCAGGAAATGACTCAAACAATTTGGAACAGTGGCTaGCATGCACAAGGTTCGTCA +
Preference number: 4 (lower is better)
Translates to: VVVSLVFNHVDRQEMTQTIWNSG*HAQGSS
Trigger: TGACGAACCTTGTGCATGGCAGCCACTGTTCCAAAT...TGTTTGAGTCATTTCCTGCCTGTCGACATGGTTAAAAACGAGAGAAACAACAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR GCA 90 bp TTCCAACTACATATAAACGGAGATTTACCACACACATTCTTTACCATGGTGCAAGGGGTTTCGGTTCTCTaGATTGGTGAGGTTGCCAGT +
Preference number: 4 (lower is better)
Translates to: FQLHINGDLPHTFFTMVQGVSVL*IGEVAS
Trigger: ACTGGCAACCTCACCAATGCAGAGAACCGAAACCCC...TTGCACCATGGTAAAGAATGTGTGTGGTAAATCTCCGTTTATATGTAGTTGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR GCA 90 bp TTGGTGGATAATGTCTTGGCTAACTGGCAGCAGCTTTTAACCGTGATATTAAAATCTTTCTGGACTGTGTaGATGTCGTTCGATGACCGC +
Preference number: 4 (lower is better)
Translates to: LVDNVLANWQQLLTVILKSFWTV*MSFDDR
Trigger: GCGGTCATCGAACGACATGCACACAGTCCAGAAAGA...TTTTAATATCACGGTTAAAAGCTGCTGCCAGTTAGCCAAGACATTATCCACCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR GCA 90 bp CTGTTACCTTCCATTAGTGTTATGGCAGGTCTGTTCATCAGGCTTATTTCCCCTACAAGGGGTCATTGTTaGATGGAGGATTTTCACTGT +
Preference number: 4 (lower is better)
Translates to: LLPSISVMAGLFIRLISPTRGHC*MEDFHC
Trigger: ACAGTGAAAATCCTCCATGCAACAATGACCCCTTGT...AGGGGAAATAAGCCTGATGAACAGACCTGCCATAACACTAATGGAAGGTAACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR GCA 90 bp GCTAAGAAACAAAGCGAAATCTTCAATGCACACATTTGTATCTGCATGTGCCACCACACCATCGGATTTTaGGTGGGGCTACCATTTCAA +
Preference number: 4 (lower is better)
Translates to: AKKQSEIFNAHICICMCHHTIGF*VGLPFQ
Trigger: TTGAAATGGTAGCCCCACGCAAAATCCGATGGTGTG...GTGGCACATGCAGATACAAATGTGTGCATTGAAGATTTCGCTTTGTTTCTTAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650260.1
CDS-3UTR CCA 90 bp AACATTAGGTTTCGTAGAAACCTAAGAATAGCATTGTACGAGGAGTGGAAACAACCTGAGCAGCGTCCTTaGCAATCTGAAGCTGAGTGT +
Preference number: 4 (lower is better)
Translates to: NIRFRRNLRIALYEEWKQPEQRP*QSEAEC
Trigger: ACACTCAGCTTCAGATTGCCAAGGACGCTGCTCAGG...TTGTTTCCACTCCTCGTACAATGCTATTCTTAGGTTTCTACGAAACCTAATGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CCA 90 bp TGTGACTGTGTTGTTGTTTCTCTCGTTTTTAACCATGTCGACAGGCAGGAAATGTGGCCTGGTAAGAGATaGGTGCATAAGTGTATATCC +
Preference number: 4 (lower is better)
Translates to: CDCVVVSLVFNHVDRQEMWPGKR*VHKCIS
Trigger: GGATATACACTTATGCACCCATCTCTTACCAGGCCA...CATTTCCTGCCTGTCGACATGGTTAAAAACGAGAGAAACAACAACACAGTCACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CCA 90 bp AACATTAGGTTTCGTAGAAACCTAAGAATAGCATTGTACGAGGAGTGGAAACAACATGCGCTTTGTCTCTaGCTGGCTGAGGTGCTCATA +
Preference number: 4 (lower is better)
Translates to: NIRFRRNLRIALYEEWKQHALCL*LAEVLI
Trigger: TATGAGCACCTCAGCCAGCCAGAGACAAAGCGCATG...TTGTTTCCACTCCTCGTACAATGCTATTCTTAGGTTTCTACGAAACCTAATGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CCA 90 bp CTGTTACCTTCCATTAGTGTTATGGCAGGTCTGTTCATCAGGCTTATTTCCCCTGGATTAGCTACTGCATaGAGATACCATTGTCTCCTA +
Preference number: 4 (lower is better)
Translates to: LLPSISVMAGLFIRLISPGLATA*RYHCLL
Trigger: TAGGAGACAATGGTATCTCCATGCAGTAGCTAATCC...AGGGGAAATAAGCCTGATGAACAGACCTGCCATAACACTAATGGAAGGTAACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CCA 90 bp CATCGTTTAGAGCATAACATGAGTTCCATACAGCAACTGTGGTATCCAGGTACCTTGTTGCCACCATCTTaGTTACAGACAGGTAATAGG +
Preference number: 4 (lower is better)
Translates to: HRLEHNMSSIQQLWYPGTLLPPS*LQTGNR
Trigger: CCTATTACCTGTCTGTAACCAAGATGGTGGCAACAA...GGTACCTGGATACCACAGTTGCTGTATGGAACTCATGTTATGCTCTAAACGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CCA 90 bp ACATATAAACGGAGATTTACCACACACATTCTTTACCATGGTGCAAGAATGCCTTGCCAACAAACGCGTTaGTTCCTGGGATCCTTGCTA +
Preference number: 4 (lower is better)
Translates to: TYKRRFTTHILYHGARMPCQQTR*FLGSLL
Trigger: TAGCAAGGATCCCAGGAACCAACGCGTTTGTTGGCA...AGGCATTCTTGCACCATGGTAAAGAATGTGTGTGGTAAATCTCCGTTTATATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CCA 90 bp TTGGTGGATAATGTCTTGGCTAACTGGCAGCAGCTTTTAACCGTGATATTAAAATCTAAGTCCTCATCATaGTTTCCCACATCGACCCCG +
Preference number: 4 (lower is better)
Translates to: LVDNVLANWQQLLTVILKSKSSS*FPTSTP
Trigger: CGGGGTCGATGTGGGAAACCATGATGAGGACTTAGA...TTTTAATATCACGGTTAAAAGCTGCTGCCAGTTAGCCAAGACATTATCCACCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CCA 90 bp ACATATAAACGGAGATTTACCACACACATTCTTTACCATGGTGCAAGAATGCCTTCCCAGATCTCATCTTaGCGTGGAGGTGAGGAGATT +
Preference number: 4 (lower is better)
Translates to: TYKRRFTTHILYHGARMPSQISS*RGGEEI
Trigger: AATCTCCTCACCTCCACGCCAAGATGAGATCTGGGA...AGGCATTCTTGCACCATGGTAAAGAATGTGTGTGGTAAATCTCCGTTTATATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CCA 90 bp GTTGTTGTTTCTCTCGTTTTTAACCATGTCGACAGGCAGGAAATGACTCAAACATTTGGAACATTCCTCTaGCTCAGCTTCACTTGCAGG +
Preference number: 4 (lower is better)
Translates to: VVVSLVFNHVDRQEMTQTFGTFL*LSFTCR
Trigger: CCTGCAAGTGAAGCTGAGCCAGAGGAATGTTCCAAA...TGTTTGAGTCATTTCCTGCCTGTCGACATGGTTAAAAACGAGAGAAACAACAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CCA 90 bp TGTGACTGTGTTGTTGTTTCTCTCGTTTTTAACCATGTCGACAGGCAGGAAATGTCCTATTTTGTGGAGTaGGGCAGTGGGATATCAGTT +
Preference number: 4 (lower is better)
Translates to: CDCVVVSLVFNHVDRQEMSYFVE*GSGISV
Trigger: AACTGATATCCCACTGCCCCACTCCACAAAATAGGA...CATTTCCTGCCTGTCGACATGGTTAAAAACGAGAGAAACAACAACACAGTCACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CCA 90 bp TGTGACTGTGTTGTTGTTTCTCTCGTTTTTAACCATGTCGACAGGCAGGAAATGAATGTCTTGGCTAACTaGCAGCAGCTTTTAACCGTG +
Preference number: 4 (lower is better)
Translates to: CDCVVVSLVFNHVDRQEMNVLAN*QQLLTV
Trigger: CACGGTTAAAAGCTGCTGCCAGTTAGCCAAGACATT...CATTTCCTGCCTGTCGACATGGTTAAAAACGAGAGAAACAACAACACAGTCACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CCA 90 bp TGTGACTGTGTTGTTGTTTCTCTCGTTTTTAACCATGTCGACAGGCAGGAAATGTGGTGGATAATGTCTTaGCTAACTGGCAGCAGCTTT +
Preference number: 4 (lower is better)
Translates to: CDCVVVSLVFNHVDRQEMWWIMS*LTGSSF
Trigger: AAAGCTGCTGCCAGTTAGCCAAGACATTATCCACCA...CATTTCCTGCCTGTCGACATGGTTAAAAACGAGAGAAACAACAACACAGTCACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR TCA 90 bp GTTGTTGTTTCTCTCGTTTTTAACCATGTCGACAGGCAGGAAATGACTCAAACATGCTGGGAACAGTGTTaGGGTTCTTCAGTTGTTTCA +
Preference number: 4 (lower is better)
Translates to: VVVSLVFNHVDRQEMTQTCWEQC*GSSVVS
Trigger: TGAAACAACTGAAGAACCTCAACACTGTTCCCAGCA...TGTTTGAGTCATTTCCTGCCTGTCGACATGGTTAAAAACGAGAGAAACAACAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR TCA 90 bp CCTCTGCCCCTCCCCATCTCTGTCAAACACAGAGAAAGAATACTGCATTACAAAAATGAATTGTGTGACTaGTTGTCACAACATAACCAG +
Preference number: 4 (lower is better)
Translates to: PLPLPISVKHRERILHYKNELCD*LSQHNQ
Trigger: CTGGTTATGTTGTGACAATCAGTCACACAATTCATT...TTTGTAATGCAGTATTCTTTCTCTGTGTTTGACAGAGATGGGGAGGGGCAGAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR TCA 90 bp GCTAAGAAACAAAGCGAAATCTTCAATGCACACATTTGTATCTGCATGTGCCACCCCTGTCCTCCATTATaGAGCACCTTATTTTGTTGC +
Preference number: 4 (lower is better)
Translates to: AKKQSEIFNAHICICMCHPCPPL*STLFCC
Trigger: GCAACAAAATAAGGTGCTTCATAATGGAGGACAGGG...GTGGCACATGCAGATACAAATGTGTGCATTGAAGATTTCGCTTTGTTTCTTAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR TCA 90 bp GCTAAGAAACAAAGCGAAATCTTCAATGCACACATTTGTATCTGCATGTGCCACCAAAGTTGGGGTGGTTaGGGATATCATTTGCTACCA +
Preference number: 4 (lower is better)
Translates to: AKKQSEIFNAHICICMCHQSWGG*GYHLLP
Trigger: TGGTAGCAAATGATATCCTCAACCACCCCAACTTTG...GTGGCACATGCAGATACAAATGTGTGCATTGAAGATTTCGCTTTGTTTCTTAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR TCA 90 bp GTTGTTGTTTCTCTCGTTTTTAACCATGTCGACAGGCAGGAAATGACTCAAACACAAAGTTGGGGTGGTTaGGGATATCATTTGCTACCA +
Preference number: 4 (lower is better)
Translates to: VVVSLVFNHVDRQEMTQTQSWGG*GYHLLP
Trigger: TGGTAGCAAATGATATCCTCAACCACCCCAACTTTG...TGTTTGAGTCATTTCCTGCCTGTCGACATGGTTAAAAACGAGAGAAACAACAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR GCA 90 bp GCTAAGAAACAAAGCGAAATCTTCAATGCACACATTTGTATCTGCATGTGCCACTCGAATCAGCTGAAATaGCTTTTGGAATCCCACTGC +
Preference number: 4 (lower is better)
Translates to: AKKQSEIFNAHICICMCHSNQLK*LLESHC
Trigger: GCAGTGGGATTCCAAAAGGCATTTCAGCTGATTCGA...GTGGCACATGCAGATACAAATGTGTGCATTGAAGATTTCGCTTTGTTTCTTAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR GCA 90 bp CTGTTACCTTCCATTAGTGTTATGGCAGGTCTGTTCATCAGGCTTATTTCCCCTCTGGTAAGAGATGGGTaGATAAGTGTATATCCTTTG +
Preference number: 4 (lower is better)
Translates to: LLPSISVMAGLFIRLISPLVRDG*ISVYPL
Trigger: CAAAGGATATACACTTATGCACCCATCTCTTACCAG...AGGGGAAATAAGCCTGATGAACAGACCTGCCATAACACTAATGGAAGGTAACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR GCA 90 bp GCTAAGAAACAAAGCGAAATCTTCAATGCACACATTTGTATCTGCATGTGCCACCTCAGCTTGTTTATGTaGCAAGACAGGGATGAGTTC +
Preference number: 4 (lower is better)
Translates to: AKKQSEIFNAHICICMCHLSLFM*QDRDEF
Trigger: GAACTCATCCCTGTCTTGGCACATAAACAAGCTGAG...GTGGCACATGCAGATACAAATGTGTGCATTGAAGATTTCGCTTTGTTTCTTAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR GCA 90 bp CATCGTTTAGAGCATAACATGAGTTCCATACAGCAACTGTGGTATCCAGGTACCAGCACCTTATTTTGTTaGCACCATCTTGGTTACAGA +
Preference number: 4 (lower is better)
Translates to: HRLEHNMSSIQQLWYPGTSTLFC*HHLGYR
Trigger: TCTGTAACCAAGATGGTGGCAACAAAATAAGGTGCT...GGTACCTGGATACCACAGTTGCTGTATGGAACTCATGTTATGCTCTAAACGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR GCA 90 bp TTGGTGGATAATGTCTTGGCTAACTGGCAGCAGCTTTTAACCGTGATATTAAAAGTTGAGGATATCATTTaGTACCAGGGGCTCCTTGTG +
Preference number: 4 (lower is better)
Translates to: LVDNVLANWQQLLTVILKVEDII*YQGLLV
Trigger: CACAAGGAGCCCCTGGTAGCAAATGATATCCTCAAC...TTTTAATATCACGGTTAAAAGCTGCTGCCAGTTAGCCAAGACATTATCCACCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR GCA 90 bp TTCCAACTACATATAAACGGAGATTTACCACACACATTCTTTACCATGGTGCAAGAACAGTGGCTGCCATaGACAAGGTTCGTCAAATCC +
Preference number: 4 (lower is better)
Translates to: FQLHINGDLPHTFFTMVQEQWLP*TRFVKS
Trigger: GGATTTGACGAACCTTGTGCATGGCAGCCACTGTTC...TTGCACCATGGTAAAGAATGTGTGTGGTAAATCTCCGTTTATATGTAGTTGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR GCA 90 bp GCTAAGAAACAAAGCGAAATCTTCAATGCACACATTTGTATCTGCATGTGCCACCACCTCATCACCTATTaGTCCCATGTCATCAACGTA +
Preference number: 4 (lower is better)
Translates to: AKKQSEIFNAHICICMCHHLITY*SHVINV
Trigger: TACGTTGATGACATGGGAGCAATAGGTGATGAGGTG...GTGGCACATGCAGATACAAATGTGTGCATTGAAGATTTCGCTTTGTTTCTTAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR GCA 90 bp TTCCAACTACATATAAACGGAGATTTACCACACACATTCTTTACCATGGTGCAATGGCTCAGCTTCACTTaGAGGTTCCGTCTCTGTGTT +
Preference number: 4 (lower is better)
Translates to: FQLHINGDLPHTFFTMVQWLSFT*RFRLCV
Trigger: AACACAGAGACGGAACCTGCAAGTGAAGCTGAGCCA...TTGCACCATGGTAAAGAATGTGTGTGGTAAATCTCCGTTTATATGTAGTTGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR GCA 90 bp GCTAAGAAACAAAGCGAAATCTTCAATGCACACATTTGTATCTGCATGTGCCACGCACACATTTGTATCTaGATGTGCCACATTCCAGTC +
Preference number: 4 (lower is better)
Translates to: AKKQSEIFNAHICICMCHAHICI*MCHIPV
Trigger: GACTGGAATGTGGCACATGCAGATACAAATGTGTGC...GTGGCACATGCAGATACAAATGTGTGCATTGAAGATTTCGCTTTGTTTCTTAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR GCA 90 bp TTGCAGGTTCCGTCTCTGTGTTTGGAGGTTCGCCTTCTGTTACCTTCCATTAGTCATTCTTTACCATGGTaGAAGAATGCCTTTATAACA +
Preference number: 4 (lower is better)
Translates to: LQVPSLCLEVRLLLPSISHSLPW*KNAFIT
Trigger: TGTTATAAAGGCATTCTTGCACCATGGTAAAGAATG...ACTAATGGAAGGTAACAGAAGGCGAACCTCCAAACACAGAGACGGAACCTGCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR GCA 90 bp GCTAAGAAACAAAGCGAAATCTTCAATGCACACATTTGTATCTGCATGTGCCACAACTGTTTGGAACACTaGCAGACACCTAGAGAGCAT +
Preference number: 4 (lower is better)
Translates to: AKKQSEIFNAHICICMCHNCLEH*QTPREH
Trigger: ATGCTCTCTAGGTGTCTGGCAGTGTTCCAAACAGTT...GTGGCACATGCAGATACAAATGTGTGCATTGAAGATTTCGCTTTGTTTCTTAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650260.1
CDS-3UTR CCA 90 bp GCTAAGAAACAAAGCGAAATCTTCAATGCACACATTTGTATCTGCATGTGCCACCCGGAACTTGTGTGCTaGGAAAACAGTGAAAATTCC +
Preference number: 4 (lower is better)
Translates to: AKKQSEIFNAHICICMCHPELVC*ENSENS
Trigger: GGAATTTTCACTGTTTTCCCAGCACACAAGTTCCGG...GTGGCACATGCAGATACAAATGTGTGCATTGAAGATTTCGCTTTGTTTCTTAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CCA 90 bp GTTGTTGTTTCTCTCGTTTTTAACCATGTCGACAGGCAGGAAATGACTCAAACACCGGAACTTGTGTGCTaGGAAAACAGTGAAAATTCC +
Preference number: 4 (lower is better)
Translates to: VVVSLVFNHVDRQEMTQTPELVC*ENSENS
Trigger: GGAATTTTCACTGTTTTCCCAGCACACAAGTTCCGG...TGTTTGAGTCATTTCCTGCCTGTCGACATGGTTAAAAACGAGAGAAACAACAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CCA 90 bp GCTAAGAAACAAAGCGAAATCTTCAATGCACACATTTGTATCTGCATGTGCCACCATCAATCATCCGGTTaGGAAGGTTTGTGTAGAACC +
Preference number: 4 (lower is better)
Translates to: AKKQSEIFNAHICICMCHHQSSG*EGLCRT
Trigger: GGTTCTACACAAACCTTCCCAACCGGATGATTGATG...GTGGCACATGCAGATACAAATGTGTGCATTGAAGATTTCGCTTTGTTTCTTAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CCA 90 bp TTGCAGGTTCCGTCTCTGTGTTTGGAGGTTCGCCTTCTGTTACCTTCCATTAGTTTTCACAGGTATTTCTaGTTGTATCACCACAATACA +
Preference number: 4 (lower is better)
Translates to: LQVPSLCLEVRLLLPSISFHRYF*LYHHNT
Trigger: TGTATTGTGGTGATACAACCAGAAATACCTGTGAAA...ACTAATGGAAGGTAACAGAAGGCGAACCTCCAAACACAGAGACGGAACCTGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CCA 90 bp GTTGTTGTTTCTCTCGTTTTTAACCATGTCGACAGGCAGGAAATGACTCAAACACATTCATCTGTGACGTaGCTGGTAGCCATTACTTCA +
Preference number: 4 (lower is better)
Translates to: VVVSLVFNHVDRQEMTQTHSSVT*LVAITS
Trigger: TGAAGTAATGGCTACCAGCCACGTCACAGATGAATG...TGTTTGAGTCATTTCCTGCCTGTCGACATGGTTAAAAACGAGAGAAACAACAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CCA 90 bp CATCGTTTAGAGCATAACATGAGTTCCATACAGCAACTGTGGTATCCAGGTACCAAGACAGCTGTGTACTaGATGAATGAATTGTGTGAC +
Preference number: 4 (lower is better)
Translates to: HRLEHNMSSIQQLWYPGTKTAVY*MNELCD
Trigger: GTCACACAATTCATTCATCCAGTACACAGCTGTCTT...GGTACCTGGATACCACAGTTGCTGTATGGAACTCATGTTATGCTCTAAACGATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CCA 90 bp CTCTGCCCCTCCCCATCTCTGTCAAACACAGAGAAAGAATACTGCATTACAAACTTTACAAAGTTGGGGTaGTTGAGGATATCATTTGCT +
Preference number: 4 (lower is better)
Translates to: LCPSPSLSNTEKEYCITNFTKLG*LRISFA
Trigger: AGCAAATGATATCCTCAACCACCCCAACTTTGTAAA...GTTTGTAATGCAGTATTCTTTCTCTGTGTTTGACAGAGATGGGGAGGGGCAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CCA 90 bp CCTCTGCCCCTCCCCATCTCTGTCAAACACAGAGAAAGAATACTGCATTACAAATTTACAAAGTTGGGGTaGTTGAGGATATCATTTGCT +
Preference number: 4 (lower is better)
Translates to: PLPLPISVKHRERILHYKFTKLG*LRISFA
Trigger: AGCAAATGATATCCTCAACCACCCCAACTTTGTAAA...TTTGTAATGCAGTATTCTTTCTCTGTGTTTGACAGAGATGGGGAGGGGCAGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CCA 90 bp TTGGTGGATAATGTCTTGGCTAACTGGCAGCAGCTTTTAACCGTGATATTAAAAGGAGGTCTCTTGCTGTaGGTTTTAAGCCGGTTCTTT +
Preference number: 4 (lower is better)
Translates to: LVDNVLANWQQLLTVILKGGLLL*VLSRFF
Trigger: AAAGAACCGGCTTAAAACCCACAGCAAGAGACCTCC...TTTTAATATCACGGTTAAAAGCTGCTGCCAGTTAGCCAAGACATTATCCACCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CCA 90 bp TTGGTGGATAATGTCTTGGCTAACTGGCAGCAGCTTTTAACCGTGATATTAAAATTTGGAACATTCCTCTaGCTCAGCTTCACTTGCAGG +
Preference number: 4 (lower is better)
Translates to: LVDNVLANWQQLLTVILKFGTFL*LSFTCR
Trigger: CCTGCAAGTGAAGCTGAGCCAGAGGAATGTTCCAAA...TTTTAATATCACGGTTAAAAGCTGCTGCCAGTTAGCCAAGACATTATCCACCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CCA 90 bp ACATATAAACGGAGATTTACCACACACATTCTTTACCATGGTGCAAGAATGCCTTCCATACAGCAACTGTaGTATCCAGGTACCGCTAAG +
Preference number: 4 (lower is better)
Translates to: TYKRRFTTHILYHGARMPSIQQL*YPGTAK
Trigger: CTTAGCGGTACCTGGATACCACAGTTGCTGTATGGA...AGGCATTCTTGCACCATGGTAAAGAATGTGTGTGGTAAATCTCCGTTTATATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CCA 90 bp TTGCAGGTTCCGTCTCTGTGTTTGGAGGTTCGCCTTCTGTTACCTTCCATTAGTAATCACAAAGCAATTTaGTGGATAATGTCTTGGCTA +
Preference number: 4 (lower is better)
Translates to: LQVPSLCLEVRLLLPSISNHKAI*WIMSWL
Trigger: TAGCCAAGACATTATCCACCAAATTGCTTTGTGATT...ACTAATGGAAGGTAACAGAAGGCGAACCTCCAAACACAGAGACGGAACCTGCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CCA 90 bp TTGCAGGTTCCGTCTCTGTGTTTGGAGGTTCGCCTTCTGTTACCTTCCATTAGTACACATTCTTTACCATaGTGCAAGAATGCCTTTATA +
Preference number: 4 (lower is better)
Translates to: LQVPSLCLEVRLLLPSISTHSLP*CKNAFI
Trigger: TATAAAGGCATTCTTGCACCATGGTAAAGAATGTGT...ACTAATGGAAGGTAACAGAAGGCGAACCTCCAAACACAGAGACGGAACCTGCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CCA 90 bp ACATATAAACGGAGATTTACCACACACATTCTTTACCATGGTGCAAGAATGCCTCCATCGGATTTTGCGTaGGGCTACCATTTCAACCTT +
Preference number: 4 (lower is better)
Translates to: TYKRRFTTHILYHGARMPPSDFA*GYHFNL
Trigger: AAGGTTGAAATGGTAGCCCCACGCAAAATCCGATGG...AGGCATTCTTGCACCATGGTAAAGAATGTGTGTGGTAAATCTCCGTTTATATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650260.1
CDS-3UTR TCA 90 bp AACATTAGGTTTCGTAGAAACCTAAGAATAGCATTGTACGAGGAGTGGAAACAAAACCAGGATAAATTCTaGGGACGCCATTGGGTGTTG +
Preference number: 4 (lower is better)
Translates to: NIRFRRNLRIALYEEWKQNQDKF*GRHWVL
Trigger: CAACACCCAATGGCGTCCTCAGAATTTATCCTGGTT...TTGTTTCCACTCCTCGTACAATGCTATTCTTAGGTTTCTACGAAACCTAATGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR TCA 90 bp CATCGTTTAGAGCATAACATGAGTTCCATACAGCAACTGTGGTATCCAGGTACCATTTTATACACAGTATaGAGGGGTTTCCTGATAGCA +
Preference number: 4 (lower is better)
Translates to: HRLEHNMSSIQQLWYPGTILYTV*RGFLIA
Trigger: TGCTATCAGGAAACCCCTTCATACTGTGTATAAAAT...GGTACCTGGATACCACAGTTGCTGTATGGAACTCATGTTATGCTCTAAACGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR GCA 90 bp GTTGTTGTTTCTCTCGTTTTTAACCATGTCGACAGGCAGGAAATGACTCAAACAGATGCTTCTACAACTTaGTTGTTCCGATTGACCACA +
Preference number: 4 (lower is better)
Translates to: VVVSLVFNHVDRQEMTQTDASTT*LFRLTT
Trigger: TGTGGTCAATCGGAACAAGCAAGTTGTAGAAGCATC...TGTTTGAGTCATTTCCTGCCTGTCGACATGGTTAAAAACGAGAGAAACAACAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR GCA 90 bp AACATTAGGTTTCGTAGAAACCTAAGAATAGCATTGTACGAGGAGTGGAAACAAAGAATCACTACTATGTaGTTTGACTGCGGCCGGACT +
Preference number: 4 (lower is better)
Translates to: NIRFRRNLRIALYEEWKQRITTM*FDCGRT
Trigger: AGTCCGGCCGCAGTCAAAGCACATAGTAGTGATTCT...TTGTTTCCACTCCTCGTACAATGCTATTCTTAGGTTTCTACGAAACCTAATGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR GCA 90 bp CCTCTGCCCCTCCCCATCTCTGTCAAACACAGAGAAAGAATACTGCATTACAAAGACCATGTCTGTATTTaGTTGGAACTTTGTGTTATT +
Preference number: 4 (lower is better)
Translates to: PLPLPISVKHRERILHYKDHVCI*LELCVI
Trigger: AATAACACAAAGTTCCAAGCAAATACAGACATGGTC...TTTGTAATGCAGTATTCTTTCTCTGTGTTTGACAGAGATGGGGAGGGGCAGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR GCA 90 bp CTCTGCCCCTCCCCATCTCTGTCAAACACAGAGAAAGAATACTGCATTACAAACGACCATGTCTGTATTTaGTTGGAACTTTGTGTTATT +
Preference number: 4 (lower is better)
Translates to: LCPSPSLSNTEKEYCITNDHVCI*LELCVI
Trigger: AATAACACAAAGTTCCAAGCAAATACAGACATGGTC...GTTTGTAATGCAGTATTCTTTCTCTGTGTTTGACAGAGATGGGGAGGGGCAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR GCA 90 bp ACATATAAACGGAGATTTACCACACACATTCTTTACCATGGTGCAAGAATGCCTCTCAGCTTGTTTATGTaGCAAGACAGGGATGAGTTC +
Preference number: 4 (lower is better)
Translates to: TYKRRFTTHILYHGARMPLSLFM*QDRDEF
Trigger: GAACTCATCCCTGTCTTGGCACATAAACAAGCTGAG...AGGCATTCTTGCACCATGGTAAAGAATGTGTGTGGTAAATCTCCGTTTATATGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR GCA 90 bp AACATTAGGTTTCGTAGAAACCTAAGAATAGCATTGTACGAGGAGTGGAAACAAATTTGGAACAGTGGCTaGCATGCACAAGGTTCGTCA +
Preference number: 4 (lower is better)
Translates to: NIRFRRNLRIALYEEWKQIWNSG*HAQGSS
Trigger: TGACGAACCTTGTGCATGGCAGCCACTGTTCCAAAT...TTGTTTCCACTCCTCGTACAATGCTATTCTTAGGTTTCTACGAAACCTAATGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR GCA 90 bp TTGGTGGATAATGTCTTGGCTAACTGGCAGCAGCTTTTAACCGTGATATTAAAACACCTCATCACCTATTaGTCCCATGTCATCAACGTA +
Preference number: 4 (lower is better)
Translates to: LVDNVLANWQQLLTVILKHLITY*SHVINV
Trigger: TACGTTGATGACATGGGAGCAATAGGTGATGAGGTG...TTTTAATATCACGGTTAAAAGCTGCTGCCAGTTAGCCAAGACATTATCCACCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR GCA 90 bp GCTAAGAAACAAAGCGAAATCTTCAATGCACACATTTGTATCTGCATGTGCCACTTAAGGAGAGCTGAATaGTTCTGGCTCTTTGGAACA +
Preference number: 4 (lower is better)
Translates to: AKKQSEIFNAHICICMCHLRRAE*FWLFGT
Trigger: TGTTCCAAAGAGCCAGAAGCATTCAGCTCTCCTTAA...GTGGCACATGCAGATACAAATGTGTGCATTGAAGATTTCGCTTTGTTTCTTAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR GCA 90 bp TTGGTGGATAATGTCTTGGCTAACTGGCAGCAGCTTTTAACCGTGATATTAAAAGCACACATTTGTATCTaGATGTGCCACATTCCAGTC +
Preference number: 4 (lower is better)
Translates to: LVDNVLANWQQLLTVILKAHICI*MCHIPV
Trigger: GACTGGAATGTGGCACATGCAGATACAAATGTGTGC...TTTTAATATCACGGTTAAAAGCTGCTGCCAGTTAGCCAAGACATTATCCACCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR GCA 90 bp ACATATAAACGGAGATTTACCACACACATTCTTTACCATGGTGCAAGAATGCCTGTTCTATCACCTGTCTaGATCCCTGAAGAACTTTGG +
Preference number: 4 (lower is better)
Translates to: TYKRRFTTHILYHGARMPVLSPV*IPEELW
Trigger: CCAAAGTTCTTCAGGGATGCAGACAGGTGATAGAAC...AGGCATTCTTGCACCATGGTAAAGAATGTGTGTGGTAAATCTCCGTTTATATGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650260.1
CDS-3UTR CCA 90 bp ACATATAAACGGAGATTTACCACACACATTCTTTACCATGGTGCAAGAATGCCTTTCCATCATGGAAGGTaGGATAGTACAGCAGTCTTG +
Preference number: 4 (lower is better)
Translates to: TYKRRFTTHILYHGARMPFHHGR*DSTAVL
Trigger: CAAGACTGCTGTACTATCCCACCTTCCATGATGGAA...AGGCATTCTTGCACCATGGTAAAGAATGTGTGTGGTAAATCTCCGTTTATATGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CCA 90 bp TTGGTGGATAATGTCTTGGCTAACTGGCAGCAGCTTTTAACCGTGATATTAAAACATCAATCATCCGGTTaGGAAGGTTTGTGTAGAACC +
Preference number: 4 (lower is better)
Translates to: LVDNVLANWQQLLTVILKHQSSG*EGLCRT
Trigger: GGTTCTACACAAACCTTCCCAACCGGATGATTGATG...TTTTAATATCACGGTTAAAAGCTGCTGCCAGTTAGCCAAGACATTATCCACCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CCA 90 bp TTGGTGGATAATGTCTTGGCTAACTGGCAGCAGCTTTTAACCGTGATATTAAAATGGCCTGGTAAGAGATaGGTGCATAAGTGTATATCC +
Preference number: 4 (lower is better)
Translates to: LVDNVLANWQQLLTVILKWPGKR*VHKCIS
Trigger: GGATATACACTTATGCACCCATCTCTTACCAGGCCA...TTTTAATATCACGGTTAAAAGCTGCTGCCAGTTAGCCAAGACATTATCCACCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CCA 90 bp CCTCTGCCCCTCCCCATCTCTGTCAAACACAGAGAAAGAATACTGCATTACAAATTTCACAGGTATTTCTaGTTGTATCACCACAATACA +
Preference number: 4 (lower is better)
Translates to: PLPLPISVKHRERILHYKFHRYF*LYHHNT
Trigger: TGTATTGTGGTGATACAACCAGAAATACCTGTGAAA...TTTGTAATGCAGTATTCTTTCTCTGTGTTTGACAGAGATGGGGAGGGGCAGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CCA 90 bp GCTAAGAAACAAAGCGAAATCTTCAATGCACACATTTGTATCTGCATGTGCCACCAAAGAAATCAACCCTaGATTAGCTACTGCATGGAG +
Preference number: 4 (lower is better)
Translates to: AKKQSEIFNAHICICMCHQRNQP*ISYCME
Trigger: CTCCATGCAGTAGCTAATCCAGGGTTGATTTCTTTG...GTGGCACATGCAGATACAAATGTGTGCATTGAAGATTTCGCTTTGTTTCTTAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CCA 90 bp GTTGTTGTTTCTCTCGTTTTTAACCATGTCGACAGGCAGGAAATGACTCAAACACAAAGAAATCAACCCTaGATTAGCTACTGCATGGAG +
Preference number: 4 (lower is better)
Translates to: VVVSLVFNHVDRQEMTQTQRNQP*ISYCME
Trigger: CTCCATGCAGTAGCTAATCCAGGGTTGATTTCTTTG...TGTTTGAGTCATTTCCTGCCTGTCGACATGGTTAAAAACGAGAGAAACAACAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CCA 90 bp GCTAAGAAACAAAGCGAAATCTTCAATGCACACATTTGTATCTGCATGTGCCACTTGTTGCCACCATCTTaGTTACAGACAGGTAATAGG +
Preference number: 4 (lower is better)
Translates to: AKKQSEIFNAHICICMCHLLPPS*LQTGNR
Trigger: CCTATTACCTGTCTGTAACCAAGATGGTGGCAACAA...GTGGCACATGCAGATACAAATGTGTGCATTGAAGATTTCGCTTTGTTTCTTAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CCA 90 bp TTCCAACTACATATAAACGGAGATTTACCACACACATTCTTTACCATGGTGCAACTGTATTTGGAACAGTaGCTGCCATGCACAAGGTTC +
Preference number: 4 (lower is better)
Translates to: FQLHINGDLPHTFFTMVQLYLEQ*LPCTRF
Trigger: GAACCTTGTGCATGGCAGCCACTGTTCCAAATACAG...TTGCACCATGGTAAAGAATGTGTGTGGTAAATCTCCGTTTATATGTAGTTGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CCA 90 bp TTCCAACTACATATAAACGGAGATTTACCACACACATTCTTTACCATGGTGCAACGCACTGACATTTCTTaGGCAGCAAGAGGAGACATA +
Preference number: 4 (lower is better)
Translates to: FQLHINGDLPHTFFTMVQRTDIS*AARGDI
Trigger: TATGTCTCCTCTTGCTGCCCAAGAAATGTCAGTGCG...TTGCACCATGGTAAAGAATGTGTGTGGTAAATCTCCGTTTATATGTAGTTGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CCA 90 bp AACATTAGGTTTCGTAGAAACCTAAGAATAGCATTGTACGAGGAGTGGAAACAACGCACTGACATTTCTTaGGCAGCAAGAGGAGACATA +
Preference number: 4 (lower is better)
Translates to: NIRFRRNLRIALYEEWKQRTDIS*AARGDI
Trigger: TATGTCTCCTCTTGCTGCCCAAGAAATGTCAGTGCG...TTGTTTCCACTCCTCGTACAATGCTATTCTTAGGTTTCTACGAAACCTAATGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CCA 90 bp GCTAAGAAACAAAGCGAAATCTTCAATGCACACATTTGTATCTGCATGTGCCACTGTCATTCTCCAGGTTaGACATACGCACTGACATTT +
Preference number: 4 (lower is better)
Translates to: AKKQSEIFNAHICICMCHCHSPG*TYALTF
Trigger: AAATGTCAGTGCGTATGTCCAACCTGGAGAATGACA...GTGGCACATGCAGATACAAATGTGTGCATTGAAGATTTCGCTTTGTTTCTTAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CCA 90 bp GTTGTTGTTTCTCTCGTTTTTAACCATGTCGACAGGCAGGAAATGACTCAAACATGTCATTCTCCAGGTTaGACATACGCACTGACATTT +
Preference number: 4 (lower is better)
Translates to: VVVSLVFNHVDRQEMTQTCHSPG*TYALTF
Trigger: AAATGTCAGTGCGTATGTCCAACCTGGAGAATGACA...TGTTTGAGTCATTTCCTGCCTGTCGACATGGTTAAAAACGAGAGAAACAACAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CCA 90 bp TTGGTGGATAATGTCTTGGCTAACTGGCAGCAGCTTTTAACCGTGATATTAAAATGGTGGATAATGTCTTaGCTAACTGGCAGCAGCTTT +
Preference number: 4 (lower is better)
Translates to: LVDNVLANWQQLLTVILKWWIMS*LTGSSF
Trigger: AAAGCTGCTGCCAGTTAGCCAAGACATTATCCACCA...TTTTAATATCACGGTTAAAAGCTGCTGCCAGTTAGCCAAGACATTATCCACCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR TCA 90 bp AACATTAGGTTTCGTAGAAACCTAAGAATAGCATTGTACGAGGAGTGGAAACAAATAGTACAGCAGTCTTaGATTGCAGTTAGGGGAGAG +
Preference number: 4 (lower is better)
Translates to: NIRFRRNLRIALYEEWKQIVQQS*IAVRGE
Trigger: CTCTCCCCTAACTGCAATTCAAGACTGCTGTACTAT...TTGTTTCCACTCCTCGTACAATGCTATTCTTAGGTTTCTACGAAACCTAATGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR TCA 90 bp AACATTAGGTTTCGTAGAAACCTAAGAATAGCATTGTACGAGGAGTGGAAACAAGTACTTCGAATCAGCTaGAATGCCTTTTGGAATCCC +
Preference number: 4 (lower is better)
Translates to: NIRFRRNLRIALYEEWKQVLRIS*NAFWNP
Trigger: GGGATTCCAAAAGGCATTTCAGCTGATTCGAAGTAC...TTGTTTCCACTCCTCGTACAATGCTATTCTTAGGTTTCTACGAAACCTAATGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR TCA 90 bp GCTAAGAAACAAAGCGAAATCTTCAATGCACACATTTGTATCTGCATGTGCCACATCCTTTGTCGTCTATaGGAAAAGTATAGGAAGCCA +
Preference number: 4 (lower is better)
Translates to: AKKQSEIFNAHICICMCHILCRL*EKYRKP
Trigger: TGGCTTCCTATACTTTTCTCATAGACGACAAAGGAT...GTGGCACATGCAGATACAAATGTGTGCATTGAAGATTTCGCTTTGTTTCTTAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR TCA 90 bp AACATTAGGTTTCGTAGAAACCTAAGAATAGCATTGTACGAGGAGTGGAAACAATGTATGATGTCAGTATaGAGTGGGGGCTCTGACAAT +
Preference number: 4 (lower is better)
Translates to: NIRFRRNLRIALYEEWKQCMMSV*SGGSDN
Trigger: ATTGTCAGAGCCCCCACTTCATACTGACATCATACA...TTGTTTCCACTCCTCGTACAATGCTATTCTTAGGTTTCTACGAAACCTAATGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR TCA 90 bp TTCCAACTACATATAAACGGAGATTTACCACACACATTCTTTACCATGGTGCAATGCTGGGAACAGTGTTaGGGTTCTTCAGTTGTTTCA +
Preference number: 4 (lower is better)
Translates to: FQLHINGDLPHTFFTMVQCWEQC*GSSVVS
Trigger: TGAAACAACTGAAGAACCTCAACACTGTTCCCAGCA...TTGCACCATGGTAAAGAATGTGTGTGGTAAATCTCCGTTTATATGTAGTTGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR TCA 90 bp TTGGTGGATAATGTCTTGGCTAACTGGCAGCAGCTTTTAACCGTGATATTAAAACAAATGCTTTGTCCATaGGGGAACCAGGATAAATTC +
Preference number: 4 (lower is better)
Translates to: LVDNVLANWQQLLTVILKQMLCP*GNQDKF
Trigger: GAATTTATCCTGGTTCCCTCATGGACAAAGCATTTG...TTTTAATATCACGGTTAAAAGCTGCTGCCAGTTAGCCAAGACATTATCCACCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR TCA 90 bp TGTGACTGTGTTGTTGTTTCTCTCGTTTTTAACCATGTCGACAGGCAGGAAATGACATCTTCACAAATGTaGCTGTGTTGTTGTTTCTCT +
Preference number: 4 (lower is better)
Translates to: CDCVVVSLVFNHVDRQEMTSSQM*LCCCFS
Trigger: AGAGAAACAACAACACAGTCACATTTGTGAAGATGT...CATTTCCTGCCTGTCGACATGGTTAAAAACGAGAGAAACAACAACACAGTCACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR TCA 90 bp GTTGTTGTTTCTCTCGTTTTTAACCATGTCGACAGGCAGGAAATGACTCAAACATGTGTTTCCGTGAAATaGTGTAAACAAGTCAGAGAG +
Preference number: 4 (lower is better)
Translates to: VVVSLVFNHVDRQEMTQTCVSVK*CKQVRE
Trigger: CTCTCTGACTTGTTTACATCATTTCACGGAAACACA...TGTTTGAGTCATTTCCTGCCTGTCGACATGGTTAAAAACGAGAGAAACAACAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR TCA 90 bp AACATTAGGTTTCGTAGAAACCTAAGAATAGCATTGTACGAGGAGTGGAAACAAACAAACCCACACAACTaGAAGAAAGAAAGCAAGCGG +
Preference number: 4 (lower is better)
Translates to: NIRFRRNLRIALYEEWKQTNPHN*KKESKR
Trigger: CCGCTTGCTTTCTTTCTTTCAGTTGTGTGGGTTTGT...TTGTTTCCACTCCTCGTACAATGCTATTCTTAGGTTTCTACGAAACCTAATGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651257.2
CDS-3UTR GCA 90 bp TTGGTGGATAATGTCTTGGCTAACTGGCAGCAGCTTTTAACCGTGATATTAAAAGTGAGCCGTATAGGATaGTTCTACAACTTGCTTGTT +
Preference number: 4 (lower is better)
Translates to: LVDNVLANWQQLLTVILKVSRIG*FYNLLV
Trigger: AACAAGCAAGTTGTAGAAGCATCCTATACGGCTCAC...TTTTAATATCACGGTTAAAAGCTGCTGCCAGTTAGCCAAGACATTATCCACCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR GCA 90 bp ACATATAAACGGAGATTTACCACACACATTCTTTACCATGGTGCAAGAATGCCTACACCGGAACTTGTGTaGTGGGAAAACAGTGAAAAT +
Preference number: 4 (lower is better)
Translates to: TYKRRFTTHILYHGARMPTPELV*WENSEN
Trigger: ATTTTCACTGTTTTCCCAGCACACAAGTTCCGGTGT...AGGCATTCTTGCACCATGGTAAAGAATGTGTGTGGTAAATCTCCGTTTATATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR GCA 90 bp AACATTAGGTTTCGTAGAAACCTAAGAATAGCATTGTACGAGGAGTGGAAACAATCGAATCAGCTGAAATaGCTTTTGGAATCCCACTGC +
Preference number: 4 (lower is better)
Translates to: NIRFRRNLRIALYEEWKQSNQLK*LLESHC
Trigger: GCAGTGGGATTCCAAAAGGCATTTCAGCTGATTCGA...TTGTTTCCACTCCTCGTACAATGCTATTCTTAGGTTTCTACGAAACCTAATGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR GCA 90 bp CTGTTACCTTCCATTAGTGTTATGGCAGGTCTGTTCATCAGGCTTATTTCCCCTGACCATGTCTGTATTTaGTTGGAACTTTGTGTTATT +
Preference number: 4 (lower is better)
Translates to: LLPSISVMAGLFIRLISPDHVCI*LELCVI
Trigger: AATAACACAAAGTTCCAAGCAAATACAGACATGGTC...AGGGGAAATAAGCCTGATGAACAGACCTGCCATAACACTAATGGAAGGTAACAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR GCA 90 bp TTCCAACTACATATAAACGGAGATTTACCACACACATTCTTTACCATGGTGCAACTCAGCTTGTTTATGTaGCAAGACAGGGATGAGTTC +
Preference number: 4 (lower is better)
Translates to: FQLHINGDLPHTFFTMVQLSLFM*QDRDEF
Trigger: GAACTCATCCCTGTCTTGGCACATAAACAAGCTGAG...TTGCACCATGGTAAAGAATGTGTGTGGTAAATCTCCGTTTATATGTAGTTGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR GCA 90 bp TTCCAACTACATATAAACGGAGATTTACCACACACATTCTTTACCATGGTGCAACCCTGGATTAGCTACTaGATGGAGATACCATTGTCT +
Preference number: 4 (lower is better)
Translates to: FQLHINGDLPHTFFTMVQPWISY*MEIPLS
Trigger: AGACAATGGTATCTCCATGCAGTAGCTAATCCAGGG...TTGCACCATGGTAAAGAATGTGTGTGGTAAATCTCCGTTTATATGTAGTTGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CCA 90 bp AACATTAGGTTTCGTAGAAACCTAAGAATAGCATTGTACGAGGAGTGGAAACAACATTCATCTGTGACGTaGCTGGTAGCCATTACTTCA +
Preference number: 4 (lower is better)
Translates to: NIRFRRNLRIALYEEWKQHSSVT*LVAITS
Trigger: TGAAGTAATGGCTACCAGCCACGTCACAGATGAATG...TTGTTTCCACTCCTCGTACAATGCTATTCTTAGGTTTCTACGAAACCTAATGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CCA 90 bp GTTGTTGTTTCTCTCGTTTTTAACCATGTCGACAGGCAGGAAATGACTCAAACAAAGACAGCTGTGTACTaGATGAATGAATTGTGTGAC +
Preference number: 4 (lower is better)
Translates to: VVVSLVFNHVDRQEMTQTKTAVY*MNELCD
Trigger: GTCACACAATTCATTCATCCAGTACACAGCTGTCTT...TGTTTGAGTCATTTCCTGCCTGTCGACATGGTTAAAAACGAGAGAAACAACAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CCA 90 bp ACATATAAACGGAGATTTACCACACACATTCTTTACCATGGTGCAAGAATGCCTTTGTTGCCACCATCTTaGTTACAGACAGGTAATAGG +
Preference number: 4 (lower is better)
Translates to: TYKRRFTTHILYHGARMPLLPPS*LQTGNR
Trigger: CCTATTACCTGTCTGTAACCAAGATGGTGGCAACAA...AGGCATTCTTGCACCATGGTAAAGAATGTGTGTGGTAAATCTCCGTTTATATGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CCA 90 bp TTGGTGGATAATGTCTTGGCTAACTGGCAGCAGCTTTTAACCGTGATATTAAAATTGCTAATCTGTATTTaGAACAGTGGCTGCCATGCA +
Preference number: 4 (lower is better)
Translates to: LVDNVLANWQQLLTVILKLLICI*NSGCHA
Trigger: TGCATGGCAGCCACTGTTCCAAATACAGATTAGCAA...TTTTAATATCACGGTTAAAAGCTGCTGCCAGTTAGCCAAGACATTATCCACCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CCA 90 bp TTCCAACTACATATAAACGGAGATTTACCACACACATTCTTTACCATGGTGCAACTTCCATTAGTGTTATaGCAGGTCTGTTCATCAGGC +
Preference number: 4 (lower is better)
Translates to: FQLHINGDLPHTFFTMVQLPLVL*QVCSSG
Trigger: GCCTGATGAACAGACCTGCCATAACACTAATGGAAG...TTGCACCATGGTAAAGAATGTGTGTGGTAAATCTCCGTTTATATGTAGTTGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CCA 90 bp TTCCAACTACATATAAACGGAGATTTACCACACACATTCTTTACCATGGTGCAAAGAGCTGAATGCTTCTaGCTCTTTGGAACATTCCTC +
Preference number: 4 (lower is better)
Translates to: FQLHINGDLPHTFFTMVQRAECF*LFGTFL
Trigger: GAGGAATGTTCCAAAGAGCCAGAAGCATTCAGCTCT...TTGCACCATGGTAAAGAATGTGTGTGGTAAATCTCCGTTTATATGTAGTTGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CCA 90 bp CATCGTTTAGAGCATAACATGAGTTCCATACAGCAACTGTGGTATCCAGGTACCACACATTCTTTACCATaGTGCAAGAATGCCTTTATA +
Preference number: 4 (lower is better)
Translates to: HRLEHNMSSIQQLWYPGTTHSLP*CKNAFI
Trigger: TATAAAGGCATTCTTGCACCATGGTAAAGAATGTGT...GGTACCTGGATACCACAGTTGCTGTATGGAACTCATGTTATGCTCTAAACGATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR TCA 90 bp TTGGTGGATAATGTCTTGGCTAACTGGCAGCAGCTTTTAACCGTGATATTAAAAATCCTTTGTCGTCTATaGGAAAAGTATAGGAAGCCA +
Preference number: 4 (lower is better)
Translates to: LVDNVLANWQQLLTVILKILCRL*EKYRKP
Trigger: TGGCTTCCTATACTTTTCTCATAGACGACAAAGGAT...TTTTAATATCACGGTTAAAAGCTGCTGCCAGTTAGCCAAGACATTATCCACCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR TCA 90 bp TTCCAACTACATATAAACGGAGATTTACCACACACATTCTTTACCATGGTGCAACAAATGCTTTGTCCATaGGGGAACCAGGATAAATTC +
Preference number: 4 (lower is better)
Translates to: FQLHINGDLPHTFFTMVQQMLCP*GNQDKF
Trigger: GAATTTATCCTGGTTCCCTCATGGACAAAGCATTTG...TTGCACCATGGTAAAGAATGTGTGTGGTAAATCTCCGTTTATATGTAGTTGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR TCA 90 bp GTTGTTGTTTCTCTCGTTTTTAACCATGTCGACAGGCAGGAAATGACTCAAACAAATGAATTGTGTGACTaGTTGTCACAACATAACCAG +
Preference number: 4 (lower is better)
Translates to: VVVSLVFNHVDRQEMTQTNELCD*LSQHNQ
Trigger: CTGGTTATGTTGTGACAATCAGTCACACAATTCATT...TGTTTGAGTCATTTCCTGCCTGTCGACATGGTTAAAAACGAGAGAAACAACAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR TCA 90 bp GTTGTTGTTTCTCTCGTTTTTAACCATGTCGACAGGCAGGAAATGACTCAAACAATTTTATACACAGTATaGAGGGGTTTCCTGATAGCA +
Preference number: 4 (lower is better)
Translates to: VVVSLVFNHVDRQEMTQTILYTV*RGFLIA
Trigger: TGCTATCAGGAAACCCCTTCATACTGTGTATAAAAT...TGTTTGAGTCATTTCCTGCCTGTCGACATGGTTAAAAACGAGAGAAACAACAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR TCA 90 bp TTGGTGGATAATGTCTTGGCTAACTGGCAGCAGCTTTTAACCGTGATATTAAAACAAGTGCTCAATAAATaGTGGTTCTATCACCTGTCT +
Preference number: 4 (lower is better)
Translates to: LVDNVLANWQQLLTVILKQVLNK*WFYHLS
Trigger: AGACAGGTGATAGAACCATCATTTATTGAGCACTTG...TTTTAATATCACGGTTAAAAGCTGCTGCCAGTTAGCCAAGACATTATCCACCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650260.1
CDS-3UTR GCA 90 bp TTCCAACTACATATAAACGGAGATTTACCACACACATTCTTTACCATGGTGCAAACACCGGAACTTGTGTaGTGGGAAAACAGTGAAAAT +
Preference number: 4 (lower is better)
Translates to: FQLHINGDLPHTFFTMVQTPELV*WENSEN
Trigger: ATTTTCACTGTTTTCCCAGCACACAAGTTCCGGTGT...TTGCACCATGGTAAAGAATGTGTGTGGTAAATCTCCGTTTATATGTAGTTGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR GCA 90 bp ACATATAAACGGAGATTTACCACACACATTCTTTACCATGGTGCAAGAATGCCTAGCACCTTATTTTGTTaGCACCATCTTGGTTACAGA +
Preference number: 4 (lower is better)
Translates to: TYKRRFTTHILYHGARMPSTLFC*HHLGYR
Trigger: TCTGTAACCAAGATGGTGGCAACAAAATAAGGTGCT...AGGCATTCTTGCACCATGGTAAAGAATGTGTGTGGTAAATCTCCGTTTATATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR GCA 90 bp TTCCAACTACATATAAACGGAGATTTACCACACACATTCTTTACCATGGTGCAAACAAGGGGTCATTGTTaGATGGAGGATTTTCACTGT +
Preference number: 4 (lower is better)
Translates to: FQLHINGDLPHTFFTMVQTRGHC*MEDFHC
Trigger: ACAGTGAAAATCCTCCATGCAACAATGACCCCTTGT...TTGCACCATGGTAAAGAATGTGTGTGGTAAATCTCCGTTTATATGTAGTTGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CCA 90 bp TGTGACTGTGTTGTTGTTTCTCTCGTTTTTAACCATGTCGACAGGCAGGAAATGTTTCACAGGTATTTCTaGTTGTATCACCACAATACA +
Preference number: 4 (lower is better)
Translates to: CDCVVVSLVFNHVDRQEMFHRYF*LYHHNT
Trigger: TGTATTGTGGTGATACAACCAGAAATACCTGTGAAA...CATTTCCTGCCTGTCGACATGGTTAAAAACGAGAGAAACAACAACACAGTCACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CCA 90 bp AACATTAGGTTTCGTAGAAACCTAAGAATAGCATTGTACGAGGAGTGGAAACAAGGATTAGCTACTGCATaGAGATACCATTGTCTCCTA +
Preference number: 4 (lower is better)
Translates to: NIRFRRNLRIALYEEWKQGLATA*RYHCLL
Trigger: TAGGAGACAATGGTATCTCCATGCAGTAGCTAATCC...TTGTTTCCACTCCTCGTACAATGCTATTCTTAGGTTTCTACGAAACCTAATGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CCA 90 bp TTCCAACTACATATAAACGGAGATTTACCACACACATTCTTTACCATGGTGCAACAAAGAAATCAACCCTaGATTAGCTACTGCATGGAG +
Preference number: 4 (lower is better)
Translates to: FQLHINGDLPHTFFTMVQQRNQP*ISYCME
Trigger: CTCCATGCAGTAGCTAATCCAGGGTTGATTTCTTTG...TTGCACCATGGTAAAGAATGTGTGTGGTAAATCTCCGTTTATATGTAGTTGGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CCA 90 bp AACATTAGGTTTCGTAGAAACCTAAGAATAGCATTGTACGAGGAGTGGAAACAATTGCTAATCTGTATTTaGAACAGTGGCTGCCATGCA +
Preference number: 4 (lower is better)
Translates to: NIRFRRNLRIALYEEWKQLLICI*NSGCHA
Trigger: TGCATGGCAGCCACTGTTCCAAATACAGATTAGCAA...TTGTTTCCACTCCTCGTACAATGCTATTCTTAGGTTTCTACGAAACCTAATGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CCA 90 bp TTCCAACTACATATAAACGGAGATTTACCACACACATTCTTTACCATGGTGCAATTGCTAATCTGTATTTaGAACAGTGGCTGCCATGCA +
Preference number: 4 (lower is better)
Translates to: FQLHINGDLPHTFFTMVQLLICI*NSGCHA
Trigger: TGCATGGCAGCCACTGTTCCAAATACAGATTAGCAA...TTGCACCATGGTAAAGAATGTGTGTGGTAAATCTCCGTTTATATGTAGTTGGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CCA 90 bp TGTGACTGTGTTGTTGTTTCTCTCGTTTTTAACCATGTCGACAGGCAGGAAATGAATCACAAAGCAATTTaGTGGATAATGTCTTGGCTA +
Preference number: 4 (lower is better)
Translates to: CDCVVVSLVFNHVDRQEMNHKAI*WIMSWL
Trigger: TAGCCAAGACATTATCCACCAAATTGCTTTGTGATT...CATTTCCTGCCTGTCGACATGGTTAAAAACGAGAGAAACAACAACACAGTCACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR TCA 90 bp ACATATAAACGGAGATTTACCACACACATTCTTTACCATGGTGCAAGAATGCCTACATCTTCACAAATGTaGCTGTGTTGTTGTTTCTCT +
Preference number: 4 (lower is better)
Translates to: TYKRRFTTHILYHGARMPTSSQM*LCCCFS
Trigger: AGAGAAACAACAACACAGTCACATTTGTGAAGATGT...AGGCATTCTTGCACCATGGTAAAGAATGTGTGTGGTAAATCTCCGTTTATATGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR TCA 90 bp AACATTAGGTTTCGTAGAAACCTAAGAATAGCATTGTACGAGGAGTGGAAACAATGTGTTTCCGTGAAATaGTGTAAACAAGTCAGAGAG +
Preference number: 4 (lower is better)
Translates to: NIRFRRNLRIALYEEWKQCVSVK*CKQVRE
Trigger: CTCTCTGACTTGTTTACATCATTTCACGGAAACACA...TTGTTTCCACTCCTCGTACAATGCTATTCTTAGGTTTCTACGAAACCTAATGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR TCA 90 bp TTGGTGGATAATGTCTTGGCTAACTGGCAGCAGCTTTTAACCGTGATATTAAAAATTTTATACACAGTATaGAGGGGTTTCCTGATAGCA +
Preference number: 4 (lower is better)
Translates to: LVDNVLANWQQLLTVILKILYTV*RGFLIA
Trigger: TGCTATCAGGAAACCCCTTCATACTGTGTATAAAAT...TTTTAATATCACGGTTAAAAGCTGCTGCCAGTTAGCCAAGACATTATCCACCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR GCA 90 bp TTGGTGGATAATGTCTTGGCTAACTGGCAGCAGCTTTTAACCGTGATATTAAAATCTGAACTGAAATATTaGCACTTAATTCCAGGGTTG +
Preference number: 4 (lower is better)
Translates to: LVDNVLANWQQLLTVILKSELKY*HLIPGL
Trigger: CAACCCTGGAATTAAGTGGCAATATTTCAGTTCAGA...TTTTAATATCACGGTTAAAAGCTGCTGCCAGTTAGCCAAGACATTATCCACCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR GCA 90 bp ACATATAAACGGAGATTTACCACACACATTCTTTACCATGGTGCAAGAATGCCTTCTGAACTGAAATATTaGCACTTAATTCCAGGGTTG +
Preference number: 4 (lower is better)
Translates to: TYKRRFTTHILYHGARMPSELKY*HLIPGL
Trigger: CAACCCTGGAATTAAGTGGCAATATTTCAGTTCAGA...AGGCATTCTTGCACCATGGTAAAGAATGTGTGTGGTAAATCTCCGTTTATATGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR GCA 90 bp AACATTAGGTTTCGTAGAAACCTAAGAATAGCATTGTACGAGGAGTGGAAACAACTGGTAAGAGATGGGTaGATAAGTGTATATCCTTTG +
Preference number: 4 (lower is better)
Translates to: NIRFRRNLRIALYEEWKQLVRDG*ISVYPL
Trigger: CAAAGGATATACACTTATGCACCCATCTCTTACCAG...TTGTTTCCACTCCTCGTACAATGCTATTCTTAGGTTTCTACGAAACCTAATGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR GCA 90 bp TTCCAACTACATATAAACGGAGATTTACCACACACATTCTTTACCATGGTGCAAAGCACCTTATTTTGTTaGCACCATCTTGGTTACAGA +
Preference number: 4 (lower is better)
Translates to: FQLHINGDLPHTFFTMVQSTLFC*HHLGYR
Trigger: TCTGTAACCAAGATGGTGGCAACAAAATAAGGTGCT...TTGCACCATGGTAAAGAATGTGTGTGGTAAATCTCCGTTTATATGTAGTTGGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR GCA 90 bp GCTAAGAAACAAAGCGAAATCTTCAATGCACACATTTGTATCTGCATGTGCCACAAGCGAAATCTTCAATaGACACATTTGTATCTGCAT +
Preference number: 4 (lower is better)
Translates to: AKKQSEIFNAHICICMCHKRNLQ*THLYLH
Trigger: ATGCAGATACAAATGTGTGCATTGAAGATTTCGCTT...GTGGCACATGCAGATACAAATGTGTGCATTGAAGATTTCGCTTTGTTTCTTAGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CCA 90 bp TTGGTGGATAATGTCTTGGCTAACTGGCAGCAGCTTTTAACCGTGATATTAAAATTTACAAAGTTGGGGTaGTTGAGGATATCATTTGCT +
Preference number: 4 (lower is better)
Translates to: LVDNVLANWQQLLTVILKFTKLG*LRISFA
Trigger: AGCAAATGATATCCTCAACCACCCCAACTTTGTAAA...TTTTAATATCACGGTTAAAAGCTGCTGCCAGTTAGCCAAGACATTATCCACCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
3UTR CAA 72 bp CTGTATAAATCACAAAGCAATTTGGTGGATAATGTCTaGGCTAACTGGCAGCAGCTTTTAACCGTGATATTA +
Preference number: 4 (lower is better)
Translates to: LYKSQSNLVDNV*ANWQQLLTVIL
Trigger: TAATATCACGGTTAAAAGCTGCTGCCAGTTAGCCAAGACATTATCCACCAAATTGCTTTGTGATTTATACAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR TCA 90 bp TTCCAACTACATATAAACGGAGATTTACCACACACATTCTTTACCATGGTGCAAAATGAATTGTGTGACTaGTTGTCACAACATAACCAG +
Preference number: 4 (lower is better)
Translates to: FQLHINGDLPHTFFTMVQNELCD*LSQHNQ
Trigger: CTGGTTATGTTGTGACAATCAGTCACACAATTCATT...TTGCACCATGGTAAAGAATGTGTGTGGTAAATCTCCGTTTATATGTAGTTGGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR GCA 90 bp AACATTAGGTTTCGTAGAAACCTAAGAATAGCATTGTACGAGGAGTGGAAACAATCTGAACTGAAATATTaGCACTTAATTCCAGGGTTG +
Preference number: 4 (lower is better)
Translates to: NIRFRRNLRIALYEEWKQSELKY*HLIPGL
Trigger: CAACCCTGGAATTAAGTGGCAATATTTCAGTTCAGA...TTGTTTCCACTCCTCGTACAATGCTATTCTTAGGTTTCTACGAAACCTAATGTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR GCA 90 bp ACATATAAACGGAGATTTACCACACACATTCTTTACCATGGTGCAAGAATGCCTAAGCGAAATCTTCAATaGACACATTTGTATCTGCAT +
Preference number: 4 (lower is better)
Translates to: TYKRRFTTHILYHGARMPKRNLQ*THLYLH
Trigger: ATGCAGATACAAATGTGTGCATTGAAGATTTCGCTT...AGGCATTCTTGCACCATGGTAAAGAATGTGTGTGGTAAATCTCCGTTTATATGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR GCA 90 bp TTGGTGGATAATGTCTTGGCTAACTGGCAGCAGCTTTTAACCGTGATATTAAAACATTCTTTACCATGGTaGAAGAATGCCTTTATAACA +
Preference number: 4 (lower is better)
Translates to: LVDNVLANWQQLLTVILKHSLPW*KNAFIT
Trigger: TGTTATAAAGGCATTCTTGCACCATGGTAAAGAATG...TTTTAATATCACGGTTAAAAGCTGCTGCCAGTTAGCCAAGACATTATCCACCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR GCA 90 bp TTCCAACTACATATAAACGGAGATTTACCACACACATTCTTTACCATGGTGCAACATTCTTTACCATGGTaGAAGAATGCCTTTATAACA +
Preference number: 4 (lower is better)
Translates to: FQLHINGDLPHTFFTMVQHSLPW*KNAFIT
Trigger: TGTTATAAAGGCATTCTTGCACCATGGTAAAGAATG...TTGCACCATGGTAAAGAATGTGTGTGGTAAATCTCCGTTTATATGTAGTTGGAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS CCA 90 bp CGCAAAAGTTTCTTCCTCTGTTGCAGGCTCTGCTCCGCGCCGCGGTaGCGAAGGCTCCCAAACTTAGGGGGCGCCCGGCTACAGCGCGGG +
Preference number: 5 (lower is better)
Translates to: RKSFFLCCRLCSAPR*RRLPNLGGARLQRG
Trigger: CCCGCGCTGTAGCCGGGCGCCCCCTAAGTTTGGGAGCCTTCGCCACCGCGGCGCGGAGCAGAGCCTGCAACAGAGGAAGAAACTTTTGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651257.2
CDS GCA 90 bp TGCTACCAGGGGCTCCTTGTGGGTGATGTGCTGCTGCTCCACAGGTaGATGTCCTTTGGGGTCGATGAGAGTCGGGTGCGCCACCAGATA +
Preference number: 5 (lower is better)
Translates to: CYQGLLVGDVLLLHR*MSFGVDESRVRHQI
Trigger: TATCTGGTGGCGCACCCGACTCTCATCGACCCCAAAGGACATGCACCTGTGGAGCAGCAGCACATCACCCACAAGGAGCCCCTGGTAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000290039.6
ENST00000470527.1
ENST00000495994.5
ENST00000650260.1
ENST00000651257.2
CDS TCA 90 bp CGGCCTTGCTCGCACCTGGCACTTAAGAAGGCGTGCAGACTGCAATaGCTGGGCAGTTCCTCCACACACCATCGGATTTTGCGTGGGGCT +
Preference number: 5 (lower is better)
Translates to: RPCSHLALKKACRLQ*LGSSSTHHRILRGA
Trigger: AGCCCCACGCAAAATCCGATGGTGTGTGGAGGAACTGCCCAGTCATTGCAGTCTGCACGCCTTCTTAAGTGCCAGGTGCGAGCAAGGCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000495994.5
ENST00000650260.1
CDS CCA 90 bp CTTTCTAGGGTTGCCAGCTGTTTGAAGTGGAGGCAAGCACTGGGCTaGCCAAGGAGATCCAGCCGGTGGTACAGCAGCTTGCTGCTGGGA +
Preference number: 5 (lower is better)
Translates to: LSRVASCLKWRQALG*PRRSSRWYSSLLLG
Trigger: TCCCAGCAGCAAGCTGCTGTACCACCGGCTGGATCTCCTTGGCCAGCCCAGTGCTTGCCTCCACTTCAAACAGCTGGCAACCCTAGAAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290039.6
ENST00000470527.1
ENST00000495994.5
ENST00000650260.1
ENST00000651257.2
CDS CCA 90 bp GCATCTTGCAGGCCAGGGTCAATAGCTGTGTATGTCACCGGCTCCTaGTGGACCTCGCAGCTGGGGTTTCGGTTCTCTGCATTGGTGAGG +
Preference number: 5 (lower is better)
Translates to: ASCRPGSIAVYVTGS*WTSQLGFRFSALVR
Trigger: CCTCACCAATGCAGAGAACCGAAACCCCAGCTGCGAGGTCCACCAGGAGCCGGTGACATACACAGCTATTGACCCTGGCCTGCAAGATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290039.6
ENST00000470527.1
ENST00000495994.5
ENST00000650260.1
ENST00000651257.2
CDS CCA 90 bp ACAGGTGAAGCCCATCGGCAGTTCCTGGTCGGCCTTGCTCGCACCTaGCACTTAAGAAGGCGTGCAGACTGCAATGACTGGGCAGTTCCT +
Preference number: 5 (lower is better)
Translates to: TGEAHRQFLVGLART*HLRRRADCNDWAVP
Trigger: AGGAACTGCCCAGTCATTGCAGTCTGCACGCCTTCTTAAGTGCCAGGTGCGAGCAAGGCCGACCAGGAACTGCCGATGGGCTTCACCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495994.5
ENST00000650260.1
CDS CCA 90 bp GACAGCATGATGGTGGGACTTTCTAGGGTTGCCAGCTGTTTGAAGTaGAGGCAAGCACTGGGCTGGCCAAGGAGATCCAGCCGGTGGTAC +
Preference number: 5 (lower is better)
Translates to: DSMMVGLSRVASCLK*RQALGWPRRSSRWY
Trigger: GTACCACCGGCTGGATCTCCTTGGCCAGCCCAGTGCTTGCCTCCACTTCAAACAGCTGGCAACCCTAGAAAGTCCCACCATCATGCTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290039.6
ENST00000470527.1
ENST00000495994.5
ENST00000650260.1
ENST00000651257.2
CDS CCA 90 bp GTCGCTGAGATAGGCGGTGTAGTGCTCTACCATGCGCTTTGTCTCTaGCTGGCTGAGGTGCTCATAGGGGGAGGAAAAGCTGCCAGCAGA +
Preference number: 5 (lower is better)
Translates to: VAEIGGVVLYHALCL*LAEVLIGGGKAASR
Trigger: TCTGCTGGCAGCTTTTCCTCCCCCTATGAGCACCTCAGCCAGCCAGAGACAAAGCGCATGGTAGAGCACTACACCGCCTATCTCAGCGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000290039.6
ENST00000470527.1
ENST00000495994.5
ENST00000650260.1
ENST00000651257.2
CDS CCA 90 bp TCTTGCAGGCCAGGGTCAATAGCTGTGTATGTCACCGGCTCCTGGTaGACCTCGCAGCTGGGGTTTCGGTTCTCTGCATTGGTGAGGTTG +
Preference number: 5 (lower is better)
Translates to: SCRPGSIAVYVTGSW*TSQLGFRFSALVRL
Trigger: CAACCTCACCAATGCAGAGAACCGAAACCCCAGCTGCGAGGTCCACCAGGAGCCGGTGACATACACAGCTATTGACCCTGGCCTGCAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290039.6
ENST00000470527.1
ENST00000495994.5
ENST00000650260.1
ENST00000651257.2
CDS TCA 90 bp AAAAGTTCAATGAATGTGTGGCAGGTGGCAGTCCAGTCTGACAGGTaGAGCCCATCGGCAGTTCCTGGTCGGCCTTGCTCGCACCTGGCA +
Preference number: 5 (lower is better)
Translates to: KSSMNVWQVAVQSDR*SPSAVPGRPCSHLA
Trigger: TGCCAGGTGCGAGCAAGGCCGACCAGGAACTGCCGATGGGCTTCACCTGTCAGACTGGACTGCCACCTGCCACACATTCATTGAACTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495994.5
ENST00000650260.1
CDS CCA 90 bp TTGAAGTGGAGGCAAGCACTGGGCTGGCCAAGGAGATCCAGCCGGTaGTACAGCAGCTTGCTGCTGGGAACAGTGTTGAGGTTCTTCAGT +
Preference number: 5 (lower is better)
Translates to: LKWRQALGWPRRSSR*YSSLLLGTVLRFFS
Trigger: ACTGAAGAACCTCAACACTGTTCCCAGCAGCAAGCTGCTGTACCACCGGCTGGATCTCCTTGGCCAGCCCAGTGCTTGCCTCCACTTCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290039.6
ENST00000470527.1
ENST00000495994.5
ENST00000650260.1
ENST00000651257.2
CDS CCA 90 bp CTTGCTCGCACCTGGCACTTAAGAAGGCGTGCAGACTGCAATGACTaGGCAGTTCCTCCACACACCATCGGATTTTGCGTGGGGCTACCA +
Preference number: 5 (lower is better)
Translates to: LARTWHLRRRADCND*AVPPHTIGFCVGLP
Trigger: TGGTAGCCCCACGCAAAATCCGATGGTGTGTGGAGGAACTGCCCAGTCATTGCAGTCTGCACGCCTTCTTAAGTGCCAGGTGCGAGCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000495994.5
ENST00000650260.1
CDS TCA 90 bp CCACCATGCTGCAGGCACAGAAGGCAAGAGAGTCGCAGGTTTCGTTaGCAATGCCAACAAACGCGTTGGTTCCTGGGATCCTTGCTAATC +
Preference number: 5 (lower is better)
Translates to: PPCCRHRRQESRRFR*QCQQTRWFLGSLLI
Trigger: GATTAGCAAGGATCCCAGGAACCAACGCGTTTGTTGGCATTGTCAACGAAACCTGCGACTCTCTTGCCTTCTGTGCCTGCAGCATGGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290039.6
ENST00000470527.1
ENST00000495994.5
ENST00000650260.1
ENST00000651257.2
CDS CCA 90 bp CATCAATCATCCGGTTGGGAAGGTTTGTGTAGAACCTGCCCACTGTaGTCTCCAGGTTGCTCAACTGATTCAGCACCATCATGCTGCCCT +
Preference number: 5 (lower is better)
Translates to: HQSSGWEGLCRTCPL*SPGCSTDSAPSCCP
Trigger: AGGGCAGCATGATGGTGCTGAATCAGTTGAGCAACCTGGAGACCACAGTGGGCAGGTTCTACACAAACCTTCCCAACCGGATGATTGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290039.6
ENST00000470527.1
ENST00000495994.5
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CAA 90 bp CTGTTACCTTCCATTAGTGTTATGGCAGGTCTGTTCATCAGGCTTATTTCCCCTGCAGGGCAAGAGGAGTaGAAGGGGCAGGCGTGGAAG +
Preference number: 5 (lower is better)
Translates to: LLPSISVMAGLFIRLISPAGQEE*KGQAWK
Trigger: CTTCCACGCCTGCCCCTTCAACTCCTCTTGCCCTGC...AGGGGAAATAAGCCTGATGAACAGACCTGCCATAACACTAATGGAAGGTAACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650260.1
CDS TCA 90 bp CCAGCAAAACGCCAAGCACAGCGGCAGTGCTTATTAAAAGTTCAATaGATGTGTGGCAGGTGGCAGTCCAGTCTGACAGGTGAAGCCCAT +
Preference number: 5 (lower is better)
Translates to: PAKRQAQRQCLLKVQ*MCGRWQSSLTGEAH
Trigger: ATGGGCTTCACCTGTCAGACTGGACTGCCACCTGCCACACATTCATTGAACTTTTAATAAGCACTGCCGCTGTGCTTGGCGTTTTGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000495994.5
ENST00000650260.1
CDS GCA 90 bp AGACGGCTTCATCAATCATCCGGTTGGGAAGGTTTGTGTAGAACCTaGCCACTGTGGTCTCCAGGTTGCTCAACTGATTCAGCACCATCA +
Preference number: 5 (lower is better)
Translates to: RRLHQSSGWEGLCRT*PLWSPGCSTDSAPS
Trigger: TGATGGTGCTGAATCAGTTGAGCAACCTGGAGACCACAGTGGGCAGGTTCTACACAAACCTTCCCAACCGGATGATTGATGAAGCCGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290039.6
ENST00000470527.1
ENST00000495994.5
ENST00000650260.1
ENST00000651257.2
CDS CCA 90 bp TGCCAACAAACGCGTTGGTTCCTGGGATCCTTGCTAATCTGTATTTaGAACAGTGGCTGCCATGCACAAGGTTCGTCAAATCCCCCGCAA +
Preference number: 5 (lower is better)
Translates to: CQQTRWFLGSLLICI*NSGCHAQGSSNPPQ
Trigger: TTGCGGGGGATTTGACGAACCTTGTGCATGGCAGCCACTGTTCCAAATACAGATTAGCAAGGATCCCAGGAACCAACGCGTTTGTTGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000290039.6
ENST00000470527.1
ENST00000495994.5
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CAA 90 bp TTGCAGGTTCCGTCTCTGTGTTTGGAGGTTCGCCTTCTGTTACCTTCCATTAGTTCCGGTTGGGAAGGTTaGTGTAGAACCTGCCCACTG +
Preference number: 5 (lower is better)
Translates to: LQVPSLCLEVRLLLPSISSGWEG*CRTCPL
Trigger: CAGTGGGCAGGTTCTACACAAACCTTCCCAACCGGA...ACTAATGGAAGGTAACAGAAGGCGAACCTCCAAACACAGAGACGGAACCTGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CAA 90 bp CTCTGCCCCTCCCCATCTCTGTCAAACACAGAGAAAGAATACTGCATTACAAACCGGTGGTACAGCAGCTaGCTGCTGGGAACAGTGTTG +
Preference number: 5 (lower is better)
Translates to: LCPSPSLSNTEKEYCITNRWYSS*LLGTVL
Trigger: CAACACTGTTCCCAGCAGCAAGCTGCTGTACCACCG...GTTTGTAATGCAGTATTCTTTCTCTGTGTTTGACAGAGATGGGGAGGGGCAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CAA 90 bp TTGCAGGTTCCGTCTCTGTGTTTGGAGGTTCGCCTTCTGTTACCTTCCATTAGTAGGGTTGCCAGCTGTTaGAAGTGGAGGCAAGCACTG +
Preference number: 5 (lower is better)
Translates to: LQVPSLCLEVRLLLPSISRVASC*KWRQAL
Trigger: CAGTGCTTGCCTCCACTTCAAACAGCTGGCAACCCT...ACTAATGGAAGGTAACAGAAGGCGAACCTCCAAACACAGAGACGGAACCTGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CAA 90 bp TTGCAGGTTCCGTCTCTGTGTTTGGAGGTTCGCCTTCTGTTACCTTCCATTAGTCTGGTGAAGAGCATCTaGCAGGCCAGGGTCAATAGC +
Preference number: 5 (lower is better)
Translates to: LQVPSLCLEVRLLLPSISLVKSI*QARVNS
Trigger: GCTATTGACCCTGGCCTGCAAGATGCTCTTCACCAG...ACTAATGGAAGGTAACAGAAGGCGAACCTCCAAACACAGAGACGGAACCTGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CAA 90 bp CTCTGCCCCTCCCCATCTCTGTCAAACACAGAGAAAGAATACTGCATTACAAACAAGTTTCTTCCTCTGTaGCAGGCTCTGCTCCGCGCC +
Preference number: 5 (lower is better)
Translates to: LCPSPSLSNTEKEYCITNKFLPL*QALLRA
Trigger: GGCGCGGAGCAGAGCCTGCAACAGAGGAAGAAACTT...GTTTGTAATGCAGTATTCTTTCTCTGTGTTTGACAGAGATGGGGAGGGGCAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651257.2
CDS TCA 90 bp GGAGATCCAGCCGGTGGTACAGCAGCTTGCTGCTGGGAACAGTGTTaGGGTTCTTCAGTTGTTTCACAGGTATTTCTGGTTGTATCACCA +
Preference number: 5 (lower is better)
Translates to: GDPAGGTAACCWEQC*GSSVVSQVFLVVSP
Trigger: TGGTGATACAACCAGAAATACCTGTGAAACAACTGAAGAACCTCAACACTGTTCCCAGCAGCAAGCTGCTGTACCACCGGCTGGATCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290039.6
ENST00000470527.1
ENST00000495994.5
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CAA 90 bp TTGGTGGATAATGTCTTGGCTAACTGGCAGCAGCTTTTAACCGTGATATTAAAACTGGCTCGCCAGCACTaGCGCCTCGTCCAGGATGGA +
Preference number: 5 (lower is better)
Translates to: LVDNVLANWQQLLTVILKLARQH*RLVQDG
Trigger: TCCATCCTGGACGAGGCGCAAGTGCTGGCGAGCCAG...TTTTAATATCACGGTTAAAAGCTGCTGCCAGTTAGCCAAGACATTATCCACCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290039.6
ENST00000651257.2
CDS-3UTR CAA 90 bp CTGTTACCTTCCATTAGTGTTATGGCAGGTCTGTTCATCAGGCTTATTTCCCCTCGGTGGTACAGCAGCTaGCTGCTGGGAACAGTGTTG +
Preference number: 5 (lower is better)
Translates to: LLPSISVMAGLFIRLISPRWYSS*LLGTVL
Trigger: CAACACTGTTCCCAGCAGCAAGCTGCTGTACCACCG...AGGGGAAATAAGCCTGATGAACAGACCTGCCATAACACTAATGGAAGGTAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CAA 90 bp CTCTGCCCCTCCCCATCTCTGTCAAACACAGAGAAAGAATACTGCATTACAAACAGGGTTGCCAGCTGTTaGAAGTGGAGGCAAGCACTG +
Preference number: 5 (lower is better)
Translates to: LCPSPSLSNTEKEYCITNRVASC*KWRQAL
Trigger: CAGTGCTTGCCTCCACTTCAAACAGCTGGCAACCCT...GTTTGTAATGCAGTATTCTTTCTCTGTGTTTGACAGAGATGGGGAGGGGCAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CAA 90 bp CCTCTGCCCCTCCCCATCTCTGTCAAACACAGAGAAAGAATACTGCATTACAAAAGGGTTGCCAGCTGTTaGAAGTGGAGGCAAGCACTG +
Preference number: 5 (lower is better)
Translates to: PLPLPISVKHRERILHYKRVASC*KWRQAL
Trigger: CAGTGCTTGCCTCCACTTCAAACAGCTGGCAACCCT...TTTGTAATGCAGTATTCTTTCTCTGTGTTTGACAGAGATGGGGAGGGGCAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CAA 90 bp CTGTTACCTTCCATTAGTGTTATGGCAGGTCTGTTCATCAGGCTTATTTCCCCTACAGGTGCATGTCCTTaGGGGTCGATGAGAGTCGGG +
Preference number: 5 (lower is better)
Translates to: LLPSISVMAGLFIRLISPTGACP*GSMRVG
Trigger: CCCGACTCTCATCGACCCCAAAGGACATGCACCTGT...AGGGGAAATAAGCCTGATGAACAGACCTGCCATAACACTAATGGAAGGTAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CAA 90 bp CATCGTTTAGAGCATAACATGAGTTCCATACAGCAACTGTGGTATCCAGGTACCACAGGTGCATGTCCTTaGGGGTCGATGAGAGTCGGG +
Preference number: 5 (lower is better)
Translates to: HRLEHNMSSIQQLWYPGTTGACP*GSMRVG
Trigger: CCCGACTCTCATCGACCCCAAAGGACATGCACCTGT...GGTACCTGGATACCACAGTTGCTGTATGGAACTCATGTTATGCTCTAAACGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CAA 90 bp GTTGTTGTTTCTCTCGTTTTTAACCATGTCGACAGGCAGGAAATGACTCAAACAGCTACCAGGGGCTCCTaGTGGGTGATGTGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: VVVSLVFNHVDRQEMTQTATRGS*WVMCCC
Trigger: GCAGCAGCACATCACCCACAAGGAGCCCCTGGTAGC...TGTTTGAGTCATTTCCTGCCTGTCGACATGGTTAAAAACGAGAGAAACAACAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CAA 90 bp TTGCAGGTTCCGTCTCTGTGTTTGGAGGTTCGCCTTCTGTTACCTTCCATTAGTATGCCAACAAACGCGTaGGTTCCTGGGATCCTTGCT +
Preference number: 5 (lower is better)
Translates to: LQVPSLCLEVRLLLPSISMPTNA*VPGILA
Trigger: AGCAAGGATCCCAGGAACCAACGCGTTTGTTGGCAT...ACTAATGGAAGGTAACAGAAGGCGAACCTCCAAACACAGAGACGGAACCTGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CAA 90 bp TTGCAGGTTCCGTCTCTGTGTTTGGAGGTTCGCCTTCTGTTACCTTCCATTAGTTTGCCAGTGCACTCATaGACCTCTAGAGGGCACTCA +
Preference number: 5 (lower is better)
Translates to: LQVPSLCLEVRLLLPSISLPVHS*TSRGHS
Trigger: TGAGTGCCCTCTAGAGGTCAATGAGTGCACTGGCAA...ACTAATGGAAGGTAACAGAAGGCGAACCTCCAAACACAGAGACGGAACCTGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CAA 90 bp TTGCAGGTTCCGTCTCTGTGTTTGGAGGTTCGCCTTCTGTTACCTTCCATTAGTTCTGCATTGGTGAGGTaGCCAGTGCACTCATTGACC +
Preference number: 5 (lower is better)
Translates to: LQVPSLCLEVRLLLPSISSALVR*PVHSLT
Trigger: GGTCAATGAGTGCACTGGCAACCTCACCAATGCAGA...ACTAATGGAAGGTAACAGAAGGCGAACCTCCAAACACAGAGACGGAACCTGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CAA 90 bp CCTCTGCCCCTCCCCATCTCTGTCAAACACAGAGAAAGAATACTGCATTACAAACACAAGGGAGGTCTCTaGCTGTGGGTTTTAAGCCGG +
Preference number: 5 (lower is better)
Translates to: PLPLPISVKHRERILHYKHKGGL*LWVLSR
Trigger: CCGGCTTAAAACCCACAGCAAGAGACCTCCCTTGTG...TTTGTAATGCAGTATTCTTTCTCTGTGTTTGACAGAGATGGGGAGGGGCAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS GCA 90 bp GTTCCTGGGATCCTTGCTAATCTGTATTTGGAACAGTGGCTGCCATaGACAAGGTTCGTCAAATCCCCCGCAAGGCTGGTGTTGAATTTA +
Preference number: 5 (lower is better)
Translates to: VPGILANLYLEQWLP*TRFVKSPARLVLNL
Trigger: TAAATTCAACACCAGCCTTGCGGGGGATTTGACGAACCTTGTGCATGGCAGCCACTGTTCCAAATACAGATTAGCAAGGATCCCAGGAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000290039.6
ENST00000470527.1
ENST00000495994.5
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CAA 90 bp TTCCAACTACATATAAACGGAGATTTACCACACACATTCTTTACCATGGTGCAACTGGCTCGCCAGCACTaGCGCCTCGTCCAGGATGGA +
Preference number: 5 (lower is better)
Translates to: FQLHINGDLPHTFFTMVQLARQH*RLVQDG
Trigger: TCCATCCTGGACGAGGCGCAAGTGCTGGCGAGCCAG...TTGCACCATGGTAAAGAATGTGTGTGGTAAATCTCCGTTTATATGTAGTTGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290039.6
ENST00000651257.2
CDS-3UTR CAA 90 bp CCTCTGCCCCTCCCCATCTCTGTCAAACACAGAGAAAGAATACTGCATTACAAACCCTTACACCGGAACTaGTGTGCTGGGAAAACAGTG +
Preference number: 5 (lower is better)
Translates to: PLPLPISVKHRERILHYKPLHRN*CAGKTV
Trigger: CACTGTTTTCCCAGCACACAAGTTCCGGTGTAAGGG...TTTGTAATGCAGTATTCTTTCTCTGTGTTTGACAGAGATGGGGAGGGGCAGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CAA 90 bp CTCTGCCCCTCCCCATCTCTGTCAAACACAGAGAAAGAATACTGCATTACAAACCAGCTGAAATGCCTTTaGGAATCCCACTGCGTGCTG +
Preference number: 5 (lower is better)
Translates to: LCPSPSLSNTEKEYCITNQLKCL*ESHCVL
Trigger: CAGCACGCAGTGGGATTCCAAAAGGCATTTCAGCTG...GTTTGTAATGCAGTATTCTTTCTCTGTGTTTGACAGAGATGGGGAGGGGCAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CAA 90 bp CTCTGCCCCTCCCCATCTCTGTCAAACACAGAGAAAGAATACTGCATTACAAACTTTCGGTTCTCTGCATaGGTGAGGTTGCCAGTGCAC +
Preference number: 5 (lower is better)
Translates to: LCPSPSLSNTEKEYCITNFRFSA*VRLPVH
Trigger: GTGCACTGGCAACCTCACCAATGCAGAGAACCGAAA...GTTTGTAATGCAGTATTCTTTCTCTGTGTTTGACAGAGATGGGGAGGGGCAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CAA 90 bp CATCGTTTAGAGCATAACATGAGTTCCATACAGCAACTGTGGTATCCAGGTACCCACAAGGGAGGTCTCTaGCTGTGGGTTTTAAGCCGG +
Preference number: 5 (lower is better)
Translates to: HRLEHNMSSIQQLWYPGTHKGGL*LWVLSR
Trigger: CCGGCTTAAAACCCACAGCAAGAGACCTCCCTTGTG...GGTACCTGGATACCACAGTTGCTGTATGGAACTCATGTTATGCTCTAAACGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS TCA 90 bp CAGTCATTATCAAACCATCTCCCATCTCATCAGAGAAGGGCAGGCTaGAGACGGCTTCATCAATCATCCGGTTGGGAAGGTTTGTGTAGA +
Preference number: 5 (lower is better)
Translates to: QSLSNHLPSHQRRAG*RRLHQSSGWEGLCR
Trigger: TCTACACAAACCTTCCCAACCGGATGATTGATGAAGCCGTCTTCAGCCTGCCCTTCTCTGATGAGATGGGAGATGGTTTGATAATGACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290039.6
ENST00000470527.1
ENST00000495994.5
ENST00000650260.1
ENST00000651257.2
CDS TCA 90 bp CTGGGAAACAAAGGAAGACATAGCAGGGATCCTTTAAAACTCACATaGAAAGAGAGTGGGCTGCTGGCAGTGTTCCCAAAGCTCTGTTGC +
Preference number: 5 (lower is better)
Translates to: LGNKGRHSRDPLKLT*KESGLLAVFPKLCC
Trigger: GCAACAGAGCTTTGGGAACACTGCCAGCAGCCCACTCTCTTTTCATGTGAGTTTTAAAGGATCCCTGCTATGTCTTCCTTTGTTTCCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486580.1
CDS GCA 90 bp GTCCATGAGGGAACCAGGATAAATTCTGAGGACGCCATTGGGTGTTaGTATGTAACGGCGGACAATGTAAGTGTTCAGGCTACTCATTTC +
Preference number: 5 (lower is better)
Translates to: VHEGTRINSEDAIGC*YVTADNVSVQATHF
Trigger: GAAATGAGTAGCCTGAACACTTACATTGTCCGCCGTTACATAGCAACACCCAATGGCGTCCTCAGAATTTATCCTGGTTCCCTCATGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000290039.6
ENST00000470527.1
ENST00000486580.1
ENST00000495994.5
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CAA 90 bp CTGTTACCTTCCATTAGTGTTATGGCAGGTCTGTTCATCAGGCTTATTTCCCCTCCCTTACACCGGAACTaGTGTGCTGGGAAAACAGTG +
Preference number: 5 (lower is better)
Translates to: LLPSISVMAGLFIRLISPPLHRN*CAGKTV
Trigger: CACTGTTTTCCCAGCACACAAGTTCCGGTGTAAGGG...AGGGGAAATAAGCCTGATGAACAGACCTGCCATAACACTAATGGAAGGTAACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CAA 90 bp TTGCAGGTTCCGTCTCTGTGTTTGGAGGTTCGCCTTCTGTTACCTTCCATTAGTTTTCTGACAGAGAATTaGAGGCCCGGGTTAGCAATG +
Preference number: 5 (lower is better)
Translates to: LQVPSLCLEVRLLLPSISFLTEN*RPGLAM
Trigger: CATTGCTAACCCGGGCCTCAAATTCTCTGTCAGAAA...ACTAATGGAAGGTAACAGAAGGCGAACCTCCAAACACAGAGACGGAACCTGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CAA 90 bp AACATTAGGTTTCGTAGAAACCTAAGAATAGCATTGTACGAGGAGTGGAAACAAGCTACCAGGGGCTCCTaGTGGGTGATGTGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: NIRFRRNLRIALYEEWKQATRGS*WVMCCC
Trigger: GCAGCAGCACATCACCCACAAGGAGCCCCTGGTAGC...TTGTTTCCACTCCTCGTACAATGCTATTCTTAGGTTTCTACGAAACCTAATGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CAA 90 bp TTCCAACTACATATAAACGGAGATTTACCACACACATTCTTTACCATGGTGCAAGCTACCAGGGGCTCCTaGTGGGTGATGTGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: FQLHINGDLPHTFFTMVQATRGS*WVMCCC
Trigger: GCAGCAGCACATCACCCACAAGGAGCCCCTGGTAGC...TTGCACCATGGTAAAGAATGTGTGTGGTAAATCTCCGTTTATATGTAGTTGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CAA 90 bp CATCGTTTAGAGCATAACATGAGTTCCATACAGCAACTGTGGTATCCAGGTACCGAGTCGCAGGTTTCGTaGACAATGCCAACAAACGCG +
Preference number: 5 (lower is better)
Translates to: HRLEHNMSSIQQLWYPGTESQVS*TMPTNA
Trigger: CGCGTTTGTTGGCATTGTCAACGAAACCTGCGACTC...GGTACCTGGATACCACAGTTGCTGTATGGAACTCATGTTATGCTCTAAACGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CAA 90 bp CTGTTACCTTCCATTAGTGTTATGGCAGGTCTGTTCATCAGGCTTATTTCCCCTTTTCGGTTCTCTGCATaGGTGAGGTTGCCAGTGCAC +
Preference number: 5 (lower is better)
Translates to: LLPSISVMAGLFIRLISPFRFSA*VRLPVH
Trigger: GTGCACTGGCAACCTCACCAATGCAGAGAACCGAAA...AGGGGAAATAAGCCTGATGAACAGACCTGCCATAACACTAATGGAAGGTAACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CAA 90 bp TTGCAGGTTCCGTCTCTGTGTTTGGAGGTTCGCCTTCTGTTACCTTCCATTAGTGACAAGGGGTCATTGTaGCATGGAGGATTTTCACTG +
Preference number: 5 (lower is better)
Translates to: LQVPSLCLEVRLLLPSISDKGSL*HGGFSL
Trigger: CAGTGAAAATCCTCCATGCAACAATGACCCCTTGTC...ACTAATGGAAGGTAACAGAAGGCGAACCTCCAAACACAGAGACGGAACCTGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CAA 90 bp CTCTGCCCCTCCCCATCTCTGTCAAACACAGAGAAAGAATACTGCATTACAAACGTGGAGGTGAGGAGATaGTTAGCATTCTGCATCGAC +
Preference number: 5 (lower is better)
Translates to: LCPSPSLSNTEKEYCITNVEVRR*LAFCID
Trigger: GTCGATGCAGAATGCTAACAATCTCCTCACCTCCAC...GTTTGTAATGCAGTATTCTTTCTCTGTGTTTGACAGAGATGGGGAGGGGCAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CAA 90 bp TTGCAGGTTCCGTCTCTGTGTTTGGAGGTTCGCCTTCTGTTACCTTCCATTAGTAATGCTTCTGGCTCTTaGGAACATTCCTCTGGCTCA +
Preference number: 5 (lower is better)
Translates to: LQVPSLCLEVRLLLPSISNASGS*EHSSGS
Trigger: TGAGCCAGAGGAATGTTCCAAAGAGCCAGAAGCATT...ACTAATGGAAGGTAACAGAAGGCGAACCTCCAAACACAGAGACGGAACCTGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CAA 90 bp GTTGTTGTTTCTCTCGTTTTTAACCATGTCGACAGGCAGGAAATGACTCAAACAGGACGCCATTGGGTGTaGCTATGTAACGGCGGACAA +
Preference number: 5 (lower is better)
Translates to: VVVSLVFNHVDRQEMTQTGRHWV*LCNGGQ
Trigger: TTGTCCGCCGTTACATAGCAACACCCAATGGCGTCC...TGTTTGAGTCATTTCCTGCCTGTCGACATGGTTAAAAACGAGAGAAACAACAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CAA 90 bp TTGCAGGTTCCGTCTCTGTGTTTGGAGGTTCGCCTTCTGTTACCTTCCATTAGTTGCATGGAGATACCATaGTCTCCTAGTGGGATCAAA +
Preference number: 5 (lower is better)
Translates to: LQVPSLCLEVRLLLPSISCMEIP*SPSGIK
Trigger: TTTGATCCCACTAGGAGACAATGGTATCTCCATGCA...ACTAATGGAAGGTAACAGAAGGCGAACCTCCAAACACAGAGACGGAACCTGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CAA 90 bp ACATATAAACGGAGATTTACCACACACATTCTTTACCATGGTGCAAGAATGCCTACAGGTGCATGTCCTTaGGGGTCGATGAGAGTCGGG +
Preference number: 5 (lower is better)
Translates to: TYKRRFTTHILYHGARMPTGACP*GSMRVG
Trigger: CCCGACTCTCATCGACCCCAAAGGACATGCACCTGT...AGGCATTCTTGCACCATGGTAAAGAATGTGTGTGGTAAATCTCCGTTTATATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CAA 90 bp TTGCAGGTTCCGTCTCTGTGTTTGGAGGTTCGCCTTCTGTTACCTTCCATTAGTTGGTTCCTGGGATCCTaGCTAATCTGTATTTGGAAC +
Preference number: 5 (lower is better)
Translates to: LQVPSLCLEVRLLLPSISWFLGS*LICIWN
Trigger: GTTCCAAATACAGATTAGCAAGGATCCCAGGAACCA...ACTAATGGAAGGTAACAGAAGGCGAACCTCCAAACACAGAGACGGAACCTGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CAA 90 bp TGTGACTGTGTTGTTGTTTCTCTCGTTTTTAACCATGTCGACAGGCAGGAAATGTTGCCAGTGCACTCATaGACCTCTAGAGGGCACTCA +
Preference number: 5 (lower is better)
Translates to: CDCVVVSLVFNHVDRQEMLPVHS*TSRGHS
Trigger: TGAGTGCCCTCTAGAGGTCAATGAGTGCACTGGCAA...CATTTCCTGCCTGTCGACATGGTTAAAAACGAGAGAAACAACAACACAGTCACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CAA 90 bp TGTGACTGTGTTGTTGTTTCTCTCGTTTTTAACCATGTCGACAGGCAGGAAATGTCTGCATTGGTGAGGTaGCCAGTGCACTCATTGACC +
Preference number: 5 (lower is better)
Translates to: CDCVVVSLVFNHVDRQEMSALVR*PVHSLT
Trigger: GGTCAATGAGTGCACTGGCAACCTCACCAATGCAGA...CATTTCCTGCCTGTCGACATGGTTAAAAACGAGAGAAACAACAACACAGTCACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CAA 90 bp GTTGTTGTTTCTCTCGTTTTTAACCATGTCGACAGGCAGGAAATGACTCAAACACTGGTGAAGAGCATCTaGCAGGCCAGGGTCAATAGC +
Preference number: 5 (lower is better)
Translates to: VVVSLVFNHVDRQEMTQTLVKSI*QARVNS
Trigger: GCTATTGACCCTGGCCTGCAAGATGCTCTTCACCAG...TGTTTGAGTCATTTCCTGCCTGTCGACATGGTTAAAAACGAGAGAAACAACAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CAA 90 bp CTCTGCCCCTCCCCATCTCTGTCAAACACAGAGAAAGAATACTGCATTACAAACTCACCTCATCACCTATaGCTCCCATGTCATCAACGT +
Preference number: 5 (lower is better)
Translates to: LCPSPSLSNTEKEYCITNSPHHL*LPCHQR
Trigger: ACGTTGATGACATGGGAGCAATAGGTGATGAGGTGA...GTTTGTAATGCAGTATTCTTTCTCTGTGTTTGACAGAGATGGGGAGGGGCAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CAA 90 bp CTGTTACCTTCCATTAGTGTTATGGCAGGTCTGTTCATCAGGCTTATTTCCCCTGTGGAGGTGAGGAGATaGTTAGCATTCTGCATCGAC +
Preference number: 5 (lower is better)
Translates to: LLPSISVMAGLFIRLISPVEVRR*LAFCID
Trigger: GTCGATGCAGAATGCTAACAATCTCCTCACCTCCAC...AGGGGAAATAAGCCTGATGAACAGACCTGCCATAACACTAATGGAAGGTAACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CAA 90 bp GTTGTTGTTTCTCTCGTTTTTAACCATGTCGACAGGCAGGAAATGACTCAAACACTGGCTCAGCTTCACTaGCAGGTTCCGTCTCTGTGT +
Preference number: 5 (lower is better)
Translates to: VVVSLVFNHVDRQEMTQTLAQLH*QVPSLC
Trigger: ACACAGAGACGGAACCTGCAAGTGAAGCTGAGCCAG...TGTTTGAGTCATTTCCTGCCTGTCGACATGGTTAAAAACGAGAGAAACAACAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CAA 90 bp CTCTGCCCCTCCCCATCTCTGTCAAACACAGAGAAAGAATACTGCATTACAAACTTGGTGGATAATGTCTaGGCTAACTGGCAGCAGCTT +
Preference number: 5 (lower is better)
Translates to: LCPSPSLSNTEKEYCITNLVDNV*ANWQQL
Trigger: AAGCTGCTGCCAGTTAGCCAAGACATTATCCACCAA...GTTTGTAATGCAGTATTCTTTCTCTGTGTTTGACAGAGATGGGGAGGGGCAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CAA 90 bp CTGTTACCTTCCATTAGTGTTATGGCAGGTCTGTTCATCAGGCTTATTTCCCCTGCTTCTACAACTTGCTaGTTCCGATTGACCACATCC +
Preference number: 5 (lower is better)
Translates to: LLPSISVMAGLFIRLISPASTTC*FRLTTS
Trigger: GGATGTGGTCAATCGGAACAAGCAAGTTGTAGAAGC...AGGGGAAATAAGCCTGATGAACAGACCTGCCATAACACTAATGGAAGGTAACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CAA 90 bp TTGGTGGATAATGTCTTGGCTAACTGGCAGCAGCTTTTAACCGTGATATTAAAATCCGGTTGGGAAGGTTaGTGTAGAACCTGCCCACTG +
Preference number: 5 (lower is better)
Translates to: LVDNVLANWQQLLTVILKSGWEG*CRTCPL
Trigger: CAGTGGGCAGGTTCTACACAAACCTTCCCAACCGGA...TTTTAATATCACGGTTAAAAGCTGCTGCCAGTTAGCCAAGACATTATCCACCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CAA 90 bp CTGTTACCTTCCATTAGTGTTATGGCAGGTCTGTTCATCAGGCTTATTTCCCCTCCAGTTTCTCTCAGCTaGTTTATGTGCCAAGACAGG +
Preference number: 5 (lower is better)
Translates to: LLPSISVMAGLFIRLISPPVSLS*FMCQDR
Trigger: CCTGTCTTGGCACATAAACAAGCTGAGAGAAACTGG...AGGGGAAATAAGCCTGATGAACAGACCTGCCATAACACTAATGGAAGGTAACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CAA 90 bp AACATTAGGTTTCGTAGAAACCTAAGAATAGCATTGTACGAGGAGTGGAAACAACGGTGGTACAGCAGCTaGCTGCTGGGAACAGTGTTG +
Preference number: 5 (lower is better)
Translates to: NIRFRRNLRIALYEEWKQRWYSS*LLGTVL
Trigger: CAACACTGTTCCCAGCAGCAAGCTGCTGTACCACCG...TTGTTTCCACTCCTCGTACAATGCTATTCTTAGGTTTCTACGAAACCTAATGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CAA 90 bp ACATATAAACGGAGATTTACCACACACATTCTTTACCATGGTGCAAGAATGCCTGGACGCCATTGGGTGTaGCTATGTAACGGCGGACAA +
Preference number: 5 (lower is better)
Translates to: TYKRRFTTHILYHGARMPGRHWV*LCNGGQ
Trigger: TTGTCCGCCGTTACATAGCAACACCCAATGGCGTCC...AGGCATTCTTGCACCATGGTAAAGAATGTGTGTGGTAAATCTCCGTTTATATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CAA 90 bp CTGTTACCTTCCATTAGTGTTATGGCAGGTCTGTTCATCAGGCTTATTTCCCCTCTTGCTAATCTGTATTaGGAACAGTGGCTGCCATGC +
Preference number: 5 (lower is better)
Translates to: LLPSISVMAGLFIRLISPLANLY*EQWLPC
Trigger: GCATGGCAGCCACTGTTCCAAATACAGATTAGCAAG...AGGGGAAATAAGCCTGATGAACAGACCTGCCATAACACTAATGGAAGGTAACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CAA 90 bp CTCTGCCCCTCCCCATCTCTGTCAAACACAGAGAAAGAATACTGCATTACAAACTGGTTCCTGGGATCCTaGCTAATCTGTATTTGGAAC +
Preference number: 5 (lower is better)
Translates to: LCPSPSLSNTEKEYCITNWFLGS*LICIWN
Trigger: GTTCCAAATACAGATTAGCAAGGATCCCAGGAACCA...GTTTGTAATGCAGTATTCTTTCTCTGTGTTTGACAGAGATGGGGAGGGGCAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CAA 90 bp GTTGTTGTTTCTCTCGTTTTTAACCATGTCGACAGGCAGGAAATGACTCAAACAATGCCAACAAACGCGTaGGTTCCTGGGATCCTTGCT +
Preference number: 5 (lower is better)
Translates to: VVVSLVFNHVDRQEMTQTMPTNA*VPGILA
Trigger: AGCAAGGATCCCAGGAACCAACGCGTTTGTTGGCAT...TGTTTGAGTCATTTCCTGCCTGTCGACATGGTTAAAAACGAGAGAAACAACAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CAA 90 bp GCTAAGAAACAAAGCGAAATCTTCAATGCACACATTTGTATCTGCATGTGCCACGAGTCGCAGGTTTCGTaGACAATGCCAACAAACGCG +
Preference number: 5 (lower is better)
Translates to: AKKQSEIFNAHICICMCHESQVS*TMPTNA
Trigger: CGCGTTTGTTGGCATTGTCAACGAAACCTGCGACTC...GTGGCACATGCAGATACAAATGTGTGCATTGAAGATTTCGCTTTGTTTCTTAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CAA 90 bp GCTAAGAAACAAAGCGAAATCTTCAATGCACACATTTGTATCTGCATGTGCCACTTGCCAGTGCACTCATaGACCTCTAGAGGGCACTCA +
Preference number: 5 (lower is better)
Translates to: AKKQSEIFNAHICICMCHLPVHS*TSRGHS
Trigger: TGAGTGCCCTCTAGAGGTCAATGAGTGCACTGGCAA...GTGGCACATGCAGATACAAATGTGTGCATTGAAGATTTCGCTTTGTTTCTTAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CAA 90 bp GCTAAGAAACAAAGCGAAATCTTCAATGCACACATTTGTATCTGCATGTGCCACTCTGCATTGGTGAGGTaGCCAGTGCACTCATTGACC +
Preference number: 5 (lower is better)
Translates to: AKKQSEIFNAHICICMCHSALVR*PVHSLT
Trigger: GGTCAATGAGTGCACTGGCAACCTCACCAATGCAGA...GTGGCACATGCAGATACAAATGTGTGCATTGAAGATTTCGCTTTGTTTCTTAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CAA 90 bp GTTGTTGTTTCTCTCGTTTTTAACCATGTCGACAGGCAGGAAATGACTCAAACATTTCGGTTCTCTGCATaGGTGAGGTTGCCAGTGCAC +
Preference number: 5 (lower is better)
Translates to: VVVSLVFNHVDRQEMTQTFRFSA*VRLPVH
Trigger: GTGCACTGGCAACCTCACCAATGCAGAGAACCGAAA...TGTTTGAGTCATTTCCTGCCTGTCGACATGGTTAAAAACGAGAGAAACAACAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CAA 90 bp TTGGTGGATAATGTCTTGGCTAACTGGCAGCAGCTTTTAACCGTGATATTAAAACTGGTGAAGAGCATCTaGCAGGCCAGGGTCAATAGC +
Preference number: 5 (lower is better)
Translates to: LVDNVLANWQQLLTVILKLVKSI*QARVNS
Trigger: GCTATTGACCCTGGCCTGCAAGATGCTCTTCACCAG...TTTTAATATCACGGTTAAAAGCTGCTGCCAGTTAGCCAAGACATTATCCACCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CAA 90 bp CATCGTTTAGAGCATAACATGAGTTCCATACAGCAACTGTGGTATCCAGGTACCTCACCTCATCACCTATaGCTCCCATGTCATCAACGT +
Preference number: 5 (lower is better)
Translates to: HRLEHNMSSIQQLWYPGTSPHHL*LPCHQR
Trigger: ACGTTGATGACATGGGAGCAATAGGTGATGAGGTGA...GGTACCTGGATACCACAGTTGCTGTATGGAACTCATGTTATGCTCTAAACGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CAA 90 bp CTGTTACCTTCCATTAGTGTTATGGCAGGTCTGTTCATCAGGCTTATTTCCCCTCTGTCATTCTCCAGGTaGGACATACGCACTGACATT +
Preference number: 5 (lower is better)
Translates to: LLPSISVMAGLFIRLISPLSFSR*DIRTDI
Trigger: AATGTCAGTGCGTATGTCCAACCTGGAGAATGACAG...AGGGGAAATAAGCCTGATGAACAGACCTGCCATAACACTAATGGAAGGTAACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CAA 90 bp CATCGTTTAGAGCATAACATGAGTTCCATACAGCAACTGTGGTATCCAGGTACCGCTATAAACCGAGTGTaGCTGATGATGCCTCTGTCT +
Preference number: 5 (lower is better)
Translates to: HRLEHNMSSIQQLWYPGTAINRV*LMMPLS
Trigger: AGACAGAGGCATCATCAGCAACACTCGGTTTATAGC...GGTACCTGGATACCACAGTTGCTGTATGGAACTCATGTTATGCTCTAAACGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CAA 90 bp CTGTTACCTTCCATTAGTGTTATGGCAGGTCTGTTCATCAGGCTTATTTCCCCTGACAAGGGGTCATTGTaGCATGGAGGATTTTCACTG +
Preference number: 5 (lower is better)
Translates to: LLPSISVMAGLFIRLISPDKGSL*HGGFSL
Trigger: CAGTGAAAATCCTCCATGCAACAATGACCCCTTGTC...AGGGGAAATAAGCCTGATGAACAGACCTGCCATAACACTAATGGAAGGTAACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CAA 90 bp CTGTTACCTTCCATTAGTGTTATGGCAGGTCTGTTCATCAGGCTTATTTCCCCTGCTGACAAGGGGTCATaGTTGCATGGAGGATTTTCA +
Preference number: 5 (lower is better)
Translates to: LLPSISVMAGLFIRLISPADKGS*LHGGFS
Trigger: TGAAAATCCTCCATGCAACAATGACCCCTTGTCAGC...AGGGGAAATAAGCCTGATGAACAGACCTGCCATAACACTAATGGAAGGTAACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CAA 90 bp TGTGACTGTGTTGTTGTTTCTCTCGTTTTTAACCATGTCGACAGGCAGGAAATGGTTCCGTCTCTGTGTTaGGAGGTTCGCCTTCTGTTA +
Preference number: 5 (lower is better)
Translates to: CDCVVVSLVFNHVDRQEMVPSLC*EVRLLL
Trigger: TAACAGAAGGCGAACCTCCAAACACAGAGACGGAAC...CATTTCCTGCCTGTCGACATGGTTAAAAACGAGAGAAACAACAACACAGTCACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CAA 90 bp CTGTTACCTTCCATTAGTGTTATGGCAGGTCTGTTCATCAGGCTTATTTCCCCTCTTCATTTTCCTATTTaGTGGAGTGGGGCAGTGGGA +
Preference number: 5 (lower is better)
Translates to: LLPSISVMAGLFIRLISPLHFPI*WSGAVG
Trigger: TCCCACTGCCCCACTCCACAAAATAGGAAAATGAAG...AGGGGAAATAAGCCTGATGAACAGACCTGCCATAACACTAATGGAAGGTAACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CAA 90 bp CTGTTACCTTCCATTAGTGTTATGGCAGGTCTGTTCATCAGGCTTATTTCCCCTTTCAATAGGCCGTCGTaGAGTGTGGTTGTGAGGATT +
Preference number: 5 (lower is better)
Translates to: LLPSISVMAGLFIRLISPFNRPS*SVVVRI
Trigger: AATCCTCACAACCACACTCAACGACGGCCTATTGAA...AGGGGAAATAAGCCTGATGAACAGACCTGCCATAACACTAATGGAAGGTAACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650260.1
CDS GCA 90 bp ATTAGCTACTGCATGGAGATACCATTGTCTCCTAGTGGGATCAAATaGTTTGTCCATGAGGGAACCAGGATAAATTCTGAGGACGCCATT +
Preference number: 5 (lower is better)
Translates to: ISYCMEIPLSPSGIK*FVHEGTRINSEDAI
Trigger: AATGGCGTCCTCAGAATTTATCCTGGTTCCCTCATGGACAAAGCATTTGATCCCACTAGGAGACAATGGTATCTCCATGCAGTAGCTAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000290039.6
ENST00000470527.1
ENST00000486580.1
ENST00000495994.5
ENST00000650260.1
ENST00000651257.2
CDS GCA 90 bp ACTGAAATATTGCCACTTAATTCCAGGGTTGGATTTCAGGTTGTCTaGAAGAACTTGGAGATACTGCAGCTCAGTTCTCGACCCCTGAAT +
Preference number: 5 (lower is better)
Translates to: TEILPLNSRVGFQVV*KNLEILQLSSRPLN
Trigger: ATTCAGGGGTCGAGAACTGAGCTGCAGTATCTCCAAGTTCTTGCAGACAACCTGAAATCCAACCCTGGAATTAAGTGGCAATATTTCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470527.1
CDS-3UTR CAA 90 bp CTGTTACCTTCCATTAGTGTTATGGCAGGTCTGTTCATCAGGCTTATTTCCCCTTACAGCAGTCTTGAATaGCAGTTAGGGGAGAGGTTA +
Preference number: 5 (lower is better)
Translates to: LLPSISVMAGLFIRLISPYSSLE*QLGERL
Trigger: TAACCTCTCCCCTAACTGCAATTCAAGACTGCTGTA...AGGGGAAATAAGCCTGATGAACAGACCTGCCATAACACTAATGGAAGGTAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CAA 90 bp GTTGTTGTTTCTCTCGTTTTTAACCATGTCGACAGGCAGGAAATGACTCAAACAAAGTCTCGTCCTGGATaGAAGGCCCGGCTATTAACA +
Preference number: 5 (lower is better)
Translates to: VVVSLVFNHVDRQEMTQTKSRPG*KARLLT
Trigger: TGTTAATAGCCGGGCCTTCAATCCAGGACGAGACTT...TGTTTGAGTCATTTCCTGCCTGTCGACATGGTTAAAAACGAGAGAAACAACAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CAA 90 bp CCTCTGCCCCTCCCCATCTCTGTCAAACACAGAGAAAGAATACTGCATTACAAAGTTAACACAGAAATCTaGTCATGTTCATCGATGGCG +
Preference number: 5 (lower is better)
Translates to: PLPLPISVKHRERILHYKVNTEI*SCSSMA
Trigger: CGCCATCGATGAACATGACAAGATTTCTGTGTTAAC...TTTGTAATGCAGTATTCTTTCTCTGTGTTTGACAGAGATGGGGAGGGGCAGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CAA 90 bp TTGGTGGATAATGTCTTGGCTAACTGGCAGCAGCTTTTAACCGTGATATTAAAACAGCTGAAATGCCTTTaGGAATCCCACTGCGTGCTG +
Preference number: 5 (lower is better)
Translates to: LVDNVLANWQQLLTVILKQLKCL*ESHCVL
Trigger: CAGCACGCAGTGGGATTCCAAAAGGCATTTCAGCTG...TTTTAATATCACGGTTAAAAGCTGCTGCCAGTTAGCCAAGACATTATCCACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CAA 90 bp TTCCAACTACATATAAACGGAGATTTACCACACACATTCTTTACCATGGTGCAATCCGGTTGGGAAGGTTaGTGTAGAACCTGCCCACTG +
Preference number: 5 (lower is better)
Translates to: FQLHINGDLPHTFFTMVQSGWEG*CRTCPL
Trigger: CAGTGGGCAGGTTCTACACAAACCTTCCCAACCGGA...TTGCACCATGGTAAAGAATGTGTGTGGTAAATCTCCGTTTATATGTAGTTGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CAA 90 bp TGTGACTGTGTTGTTGTTTCTCTCGTTTTTAACCATGTCGACAGGCAGGAAATGCTGCTGGGAACAGTGTaGAGGTTCTTCAGTTGTTTC +
Preference number: 5 (lower is better)
Translates to: CDCVVVSLVFNHVDRQEMLLGTV*RFFSCF
Trigger: GAAACAACTGAAGAACCTCAACACTGTTCCCAGCAG...CATTTCCTGCCTGTCGACATGGTTAAAAACGAGAGAAACAACAACACAGTCACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CAA 90 bp AACATTAGGTTTCGTAGAAACCTAAGAATAGCATTGTACGAGGAGTGGAAACAAGGACGCCATTGGGTGTaGCTATGTAACGGCGGACAA +
Preference number: 5 (lower is better)
Translates to: NIRFRRNLRIALYEEWKQGRHWV*LCNGGQ
Trigger: TTGTCCGCCGTTACATAGCAACACCCAATGGCGTCC...TTGTTTCCACTCCTCGTACAATGCTATTCTTAGGTTTCTACGAAACCTAATGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CAA 90 bp CTGTTACCTTCCATTAGTGTTATGGCAGGTCTGTTCATCAGGCTTATTTCCCCTTGCATGGAGATACCATaGTCTCCTAGTGGGATCAAA +
Preference number: 5 (lower is better)
Translates to: LLPSISVMAGLFIRLISPCMEIP*SPSGIK
Trigger: TTTGATCCCACTAGGAGACAATGGTATCTCCATGCA...AGGGGAAATAAGCCTGATGAACAGACCTGCCATAACACTAATGGAAGGTAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CAA 90 bp CATCGTTTAGAGCATAACATGAGTTCCATACAGCAACTGTGGTATCCAGGTACCTGCATGGAGATACCATaGTCTCCTAGTGGGATCAAA +
Preference number: 5 (lower is better)
Translates to: HRLEHNMSSIQQLWYPGTCMEIP*SPSGIK
Trigger: TTTGATCCCACTAGGAGACAATGGTATCTCCATGCA...GGTACCTGGATACCACAGTTGCTGTATGGAACTCATGTTATGCTCTAAACGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CAA 90 bp CCTCTGCCCCTCCCCATCTCTGTCAAACACAGAGAAAGAATACTGCATTACAAAAAGCACCTTATTTTGTaGCCACCATCTTGGTTACAG +
Preference number: 5 (lower is better)
Translates to: PLPLPISVKHRERILHYKKHLIL*PPSWLQ
Trigger: CTGTAACCAAGATGGTGGCAACAAAATAAGGTGCTT...TTTGTAATGCAGTATTCTTTCTCTGTGTTTGACAGAGATGGGGAGGGGCAGAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CAA 90 bp CTCTGCCCCTCCCCATCTCTGTCAAACACAGAGAAAGAATACTGCATTACAAACCTGTCACTGAAGCTGTaGCACAGGTTTTTCTTTACA +
Preference number: 5 (lower is better)
Translates to: LCPSPSLSNTEKEYCITNLSLKL*HRFFFT
Trigger: TGTAAAGAAAAACCTGTGCAACAGCTTCAGTGACAG...GTTTGTAATGCAGTATTCTTTCTCTGTGTTTGACAGAGATGGGGAGGGGCAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CAA 90 bp TTGGTGGATAATGTCTTGGCTAACTGGCAGCAGCTTTTAACCGTGATATTAAAAGAGTCGCAGGTTTCGTaGACAATGCCAACAAACGCG +
Preference number: 5 (lower is better)
Translates to: LVDNVLANWQQLLTVILKESQVS*TMPTNA
Trigger: CGCGTTTGTTGGCATTGTCAACGAAACCTGCGACTC...TTTTAATATCACGGTTAAAAGCTGCTGCCAGTTAGCCAAGACATTATCCACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CAA 90 bp TGTGACTGTGTTGTTGTTTCTCTCGTTTTTAACCATGTCGACAGGCAGGAAATGGCTGACAAGGGGTCATaGTTGCATGGAGGATTTTCA +
Preference number: 5 (lower is better)
Translates to: CDCVVVSLVFNHVDRQEMADKGS*LHGGFS
Trigger: TGAAAATCCTCCATGCAACAATGACCCCTTGTCAGC...CATTTCCTGCCTGTCGACATGGTTAAAAACGAGAGAAACAACAACACAGTCACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CAA 90 bp GCTAAGAAACAAAGCGAAATCTTCAATGCACACATTTGTATCTGCATGTGCCACGTTCCGTCTCTGTGTTaGGAGGTTCGCCTTCTGTTA +
Preference number: 5 (lower is better)
Translates to: AKKQSEIFNAHICICMCHVPSLC*EVRLLL
Trigger: TAACAGAAGGCGAACCTCCAAACACAGAGACGGAAC...GTGGCACATGCAGATACAAATGTGTGCATTGAAGATTTCGCTTTGTTTCTTAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CAA 90 bp AACATTAGGTTTCGTAGAAACCTAAGAATAGCATTGTACGAGGAGTGGAAACAACTGGCTCAGCTTCACTaGCAGGTTCCGTCTCTGTGT +
Preference number: 5 (lower is better)
Translates to: NIRFRRNLRIALYEEWKQLAQLH*QVPSLC
Trigger: ACACAGAGACGGAACCTGCAAGTGAAGCTGAGCCAG...TTGTTTCCACTCCTCGTACAATGCTATTCTTAGGTTTCTACGAAACCTAATGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CAA 90 bp TTGCAGGTTCCGTCTCTGTGTTTGGAGGTTCGCCTTCTGTTACCTTCCATTAGTCCATTTCAACCTTGGTaGAAAATAAAATGCAGGCCA +
Preference number: 5 (lower is better)
Translates to: LQVPSLCLEVRLLLPSISPFQPW*KIKCRP
Trigger: TGGCCTGCATTTTATTTTCAACCAAGGTTGAAATGG...ACTAATGGAAGGTAACAGAAGGCGAACCTCCAAACACAGAGACGGAACCTGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650260.1
CDS-3UTR CAA 90 bp CTCTGCCCCTCCCCATCTCTGTCAAACACAGAGAAAGAATACTGCATTACAAACATACACATAAACTGTTaGGAACACTGCCAGACACCT +
Preference number: 5 (lower is better)
Translates to: LCPSPSLSNTEKEYCITNIHINC*EHCQTP
Trigger: AGGTGTCTGGCAGTGTTCCAAACAGTTTATGTGTAT...GTTTGTAATGCAGTATTCTTTCTCTGTGTTTGACAGAGATGGGGAGGGGCAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650260.1
CDS TCA 90 bp GTATTTGCTTGGAACTTTGTGTTATTGTTTGTACTTCGAATCAGCTaGAATGCCTTTTGGAATCCCACTGCGTGCTGGGTAGGACTGTCT +
Preference number: 5 (lower is better)
Translates to: VFAWNFVLLFVLRIS*NAFWNPTACWVGLS
Trigger: AGACAGTCCTACCCAGCACGCAGTGGGATTCCAAAAGGCATTTCAGCTGATTCGAAGTACAAACAATAACACAAAGTTCCAAGCAAATAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290039.6
ENST00000470527.1
ENST00000495994.5
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CAA 90 bp TTGCAGGTTCCGTCTCTGTGTTTGGAGGTTCGCCTTCTGTTACCTTCCATTAGTATTGTTCTAGACACATaGGTATTAAAGTTCCCATCG +
Preference number: 5 (lower is better)
Translates to: LQVPSLCLEVRLLLPSISIVLDT*VLKFPS
Trigger: CGATGGGAACTTTAATACCAATGTGTCTAGAACAAT...ACTAATGGAAGGTAACAGAAGGCGAACCTCCAAACACAGAGACGGAACCTGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CAA 90 bp TTGGTGGATAATGTCTTGGCTAACTGGCAGCAGCTTTTAACCGTGATATTAAAAAAGTCTCGTCCTGGATaGAAGGCCCGGCTATTAACA +
Preference number: 5 (lower is better)
Translates to: LVDNVLANWQQLLTVILKKSRPG*KARLLT
Trigger: TGTTAATAGCCGGGCCTTCAATCCAGGACGAGACTT...TTTTAATATCACGGTTAAAAGCTGCTGCCAGTTAGCCAAGACATTATCCACCAA
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CAA 90 bp AACATTAGGTTTCGTAGAAACCTAAGAATAGCATTGTACGAGGAGTGGAAACAACCCTTACACCGGAACTaGTGTGCTGGGAAAACAGTG +
Preference number: 5 (lower is better)
Translates to: NIRFRRNLRIALYEEWKQPLHRN*CAGKTV
Trigger: CACTGTTTTCCCAGCACACAAGTTCCGGTGTAAGGG...TTGTTTCCACTCCTCGTACAATGCTATTCTTAGGTTTCTACGAAACCTAATGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CAA 90 bp TTCCAACTACATATAAACGGAGATTTACCACACACATTCTTTACCATGGTGCAACAGCTGAAATGCCTTTaGGAATCCCACTGCGTGCTG +
Preference number: 5 (lower is better)
Translates to: FQLHINGDLPHTFFTMVQQLKCL*ESHCVL
Trigger: CAGCACGCAGTGGGATTCCAAAAGGCATTTCAGCTG...TTGCACCATGGTAAAGAATGTGTGTGGTAAATCTCCGTTTATATGTAGTTGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CAA 90 bp GTTGTTGTTTCTCTCGTTTTTAACCATGTCGACAGGCAGGAAATGACTCAAACAGGAAGCCAAAGAGTCTaGGTAATACGTCACGTCTTC +
Preference number: 5 (lower is better)
Translates to: VVVSLVFNHVDRQEMTQTGSQRV*VIRHVF
Trigger: GAAGACGTGACGTATTACCAAGACTCTTTGGCTTCC...TGTTTGAGTCATTTCCTGCCTGTCGACATGGTTAAAAACGAGAGAAACAACAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CAA 90 bp GCTAAGAAACAAAGCGAAATCTTCAATGCACACATTTGTATCTGCATGTGCCACCCAGTTTCTCTCAGCTaGTTTATGTGCCAAGACAGG +
Preference number: 5 (lower is better)
Translates to: AKKQSEIFNAHICICMCHPVSLS*FMCQDR
Trigger: CCTGTCTTGGCACATAAACAAGCTGAGAGAAACTGG...GTGGCACATGCAGATACAAATGTGTGCATTGAAGATTTCGCTTTGTTTCTTAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CAA 90 bp CTCTGCCCCTCCCCATCTCTGTCAAACACAGAGAAAGAATACTGCATTACAAACAATAAAGGAAGTGTCTaGTACCATCTTCCAGGCATA +
Preference number: 5 (lower is better)
Translates to: LCPSPSLSNTEKEYCITNNKGSV*YHLPGI
Trigger: TATGCCTGGAAGATGGTACAAGACACTTCCTTTATT...GTTTGTAATGCAGTATTCTTTCTCTGTGTTTGACAGAGATGGGGAGGGGCAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CAA 90 bp GTTGTTGTTTCTCTCGTTTTTAACCATGTCGACAGGCAGGAAATGACTCAAACACTGCTGGGAACAGTGTaGAGGTTCTTCAGTTGTTTC +
Preference number: 5 (lower is better)
Translates to: VVVSLVFNHVDRQEMTQTLLGTV*RFFSCF
Trigger: GAAACAACTGAAGAACCTCAACACTGTTCCCAGCAG...TGTTTGAGTCATTTCCTGCCTGTCGACATGGTTAAAAACGAGAGAAACAACAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CAA 90 bp CCTCTGCCCCTCCCCATCTCTGTCAAACACAGAGAAAGAATACTGCATTACAAAATGAAGCACCTTATTTaGTTGCCACCATCTTGGTTA +
Preference number: 5 (lower is better)
Translates to: PLPLPISVKHRERILHYKMKHLI*LPPSWL
Trigger: TAACCAAGATGGTGGCAACAAAATAAGGTGCTTCAT...TTTGTAATGCAGTATTCTTTCTCTGTGTTTGACAGAGATGGGGAGGGGCAGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CAA 90 bp TTCCAACTACATATAAACGGAGATTTACCACACACATTCTTTACCATGGTGCAAATGCCAACAAACGCGTaGGTTCCTGGGATCCTTGCT +
Preference number: 5 (lower is better)
Translates to: FQLHINGDLPHTFFTMVQMPTNA*VPGILA
Trigger: AGCAAGGATCCCAGGAACCAACGCGTTTGTTGGCAT...TTGCACCATGGTAAAGAATGTGTGTGGTAAATCTCCGTTTATATGTAGTTGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CAA 90 bp GTTGTTGTTTCTCTCGTTTTTAACCATGTCGACAGGCAGGAAATGACTCAAACACTGTCATTCTCCAGGTaGGACATACGCACTGACATT +
Preference number: 5 (lower is better)
Translates to: VVVSLVFNHVDRQEMTQTLSFSR*DIRTDI
Trigger: AATGTCAGTGCGTATGTCCAACCTGGAGAATGACAG...TGTTTGAGTCATTTCCTGCCTGTCGACATGGTTAAAAACGAGAGAAACAACAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CAA 90 bp GCTAAGAAACAAAGCGAAATCTTCAATGCACACATTTGTATCTGCATGTGCCACGCTATAAACCGAGTGTaGCTGATGATGCCTCTGTCT +
Preference number: 5 (lower is better)
Translates to: AKKQSEIFNAHICICMCHAINRV*LMMPLS
Trigger: AGACAGAGGCATCATCAGCAACACTCGGTTTATAGC...GTGGCACATGCAGATACAAATGTGTGCATTGAAGATTTCGCTTTGTTTCTTAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CAA 90 bp TTGGTGGATAATGTCTTGGCTAACTGGCAGCAGCTTTTAACCGTGATATTAAAAGTGGAGGTGAGGAGATaGTTAGCATTCTGCATCGAC +
Preference number: 5 (lower is better)
Translates to: LVDNVLANWQQLLTVILKVEVRR*LAFCID
Trigger: GTCGATGCAGAATGCTAACAATCTCCTCACCTCCAC...TTTTAATATCACGGTTAAAAGCTGCTGCCAGTTAGCCAAGACATTATCCACCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CAA 90 bp TTGGTGGATAATGTCTTGGCTAACTGGCAGCAGCTTTTAACCGTGATATTAAAAGTTCCGTCTCTGTGTTaGGAGGTTCGCCTTCTGTTA +
Preference number: 5 (lower is better)
Translates to: LVDNVLANWQQLLTVILKVPSLC*EVRLLL
Trigger: TAACAGAAGGCGAACCTCCAAACACAGAGACGGAAC...TTTTAATATCACGGTTAAAAGCTGCTGCCAGTTAGCCAAGACATTATCCACCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CAA 90 bp GTTGTTGTTTCTCTCGTTTTTAACCATGTCGACAGGCAGGAAATGACTCAAACAAATGCTTCTGGCTCTTaGGAACATTCCTCTGGCTCA +
Preference number: 5 (lower is better)
Translates to: VVVSLVFNHVDRQEMTQTNASGS*EHSSGS
Trigger: TGAGCCAGAGGAATGTTCCAAAGAGCCAGAAGCATT...TGTTTGAGTCATTTCCTGCCTGTCGACATGGTTAAAAACGAGAGAAACAACAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CAA 90 bp CTCTGCCCCTCCCCATCTCTGTCAAACACAGAGAAAGAATACTGCATTACAAACAACCTAAGAATAGCATaGTACGAGGAGTGGAAACAA +
Preference number: 5 (lower is better)
Translates to: LCPSPSLSNTEKEYCITNNLRIA*YEEWKQ
Trigger: TTGTTTCCACTCCTCGTACAATGCTATTCTTAGGTT...GTTTGTAATGCAGTATTCTTTCTCTGTGTTTGACAGAGATGGGGAGGGGCAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CAA 90 bp TGTGACTGTGTTGTTGTTTCTCTCGTTTTTAACCATGTCGACAGGCAGGAAATGTCCGCTCATTGGTGGTaGGGAAGATCAAACAAAGTA +
Preference number: 5 (lower is better)
Translates to: CDCVVVSLVFNHVDRQEMSAHWW*GRSNKV
Trigger: TACTTTGTTTGATCTTCCCAACCACCAATGAGCGGA...CATTTCCTGCCTGTCGACATGGTTAAAAACGAGAGAAACAACAACACAGTCACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650260.1
CDS-3UTR CAA 90 bp CATCGTTTAGAGCATAACATGAGTTCCATACAGCAACTGTGGTATCCAGGTACCTTGAATATCCGCTCATaGGTGGTTGGGAAGATCAAA +
Preference number: 5 (lower is better)
Translates to: HRLEHNMSSIQQLWYPGTLNIRS*VVGKIK
Trigger: TTTGATCTTCCCAACCACCAATGAGCGGATATTCAA...GGTACCTGGATACCACAGTTGCTGTATGGAACTCATGTTATGCTCTAAACGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650260.1
CDS-3UTR CAA 90 bp TTGGTGGATAATGTCTTGGCTAACTGGCAGCAGCTTTTAACCGTGATATTAAAAGCTTCTACAACTTGCTaGTTCCGATTGACCACATCC +
Preference number: 5 (lower is better)
Translates to: LVDNVLANWQQLLTVILKASTTC*FRLTTS
Trigger: GGATGTGGTCAATCGGAACAAGCAAGTTGTAGAAGC...TTTTAATATCACGGTTAAAAGCTGCTGCCAGTTAGCCAAGACATTATCCACCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CAA 90 bp CTGTTACCTTCCATTAGTGTTATGGCAGGTCTGTTCATCAGGCTTATTTCCCCTAAGCTATTTTCTTCATaGATGACTTGGAGAGTCGCT +
Preference number: 5 (lower is better)
Translates to: LLPSISVMAGLFIRLISPKLFSS*MTWRVA
Trigger: AGCGACTCTCCAAGTCATCAATGAAGAAAATAGCTT...AGGGGAAATAAGCCTGATGAACAGACCTGCCATAACACTAATGGAAGGTAACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CAA 90 bp TTGGTGGATAATGTCTTGGCTAACTGGCAGCAGCTTTTAACCGTGATATTAAAAGGAAGCCAAAGAGTCTaGGTAATACGTCACGTCTTC +
Preference number: 5 (lower is better)
Translates to: LVDNVLANWQQLLTVILKGSQRV*VIRHVF
Trigger: GAAGACGTGACGTATTACCAAGACTCTTTGGCTTCC...TTTTAATATCACGGTTAAAAGCTGCTGCCAGTTAGCCAAGACATTATCCACCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CAA 90 bp ACATATAAACGGAGATTTACCACACACATTCTTTACCATGGTGCAAGAATGCCTCCAGTTTCTCTCAGCTaGTTTATGTGCCAAGACAGG +
Preference number: 5 (lower is better)
Translates to: TYKRRFTTHILYHGARMPPVSLS*FMCQDR
Trigger: CCTGTCTTGGCACATAAACAAGCTGAGAGAAACTGG...AGGCATTCTTGCACCATGGTAAAGAATGTGTGTGGTAAATCTCCGTTTATATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CAA 90 bp CATCGTTTAGAGCATAACATGAGTTCCATACAGCAACTGTGGTATCCAGGTACCAATAAAGGAAGTGTCTaGTACCATCTTCCAGGCATA +
Preference number: 5 (lower is better)
Translates to: HRLEHNMSSIQQLWYPGTNKGSV*YHLPGI
Trigger: TATGCCTGGAAGATGGTACAAGACACTTCCTTTATT...GGTACCTGGATACCACAGTTGCTGTATGGAACTCATGTTATGCTCTAAACGATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CAA 90 bp CATCGTTTAGAGCATAACATGAGTTCCATACAGCAACTGTGGTATCCAGGTACCATGAAGCACCTTATTTaGTTGCCACCATCTTGGTTA +
Preference number: 5 (lower is better)
Translates to: HRLEHNMSSIQQLWYPGTMKHLI*LPPSWL
Trigger: TAACCAAGATGGTGGCAACAAAATAAGGTGCTTCAT...GGTACCTGGATACCACAGTTGCTGTATGGAACTCATGTTATGCTCTAAACGATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CAA 90 bp TTGGTGGATAATGTCTTGGCTAACTGGCAGCAGCTTTTAACCGTGATATTAAAACTGTCATTCTCCAGGTaGGACATACGCACTGACATT +
Preference number: 5 (lower is better)
Translates to: LVDNVLANWQQLLTVILKLSFSR*DIRTDI
Trigger: AATGTCAGTGCGTATGTCCAACCTGGAGAATGACAG...TTTTAATATCACGGTTAAAAGCTGCTGCCAGTTAGCCAAGACATTATCCACCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CAA 90 bp TTGGTGGATAATGTCTTGGCTAACTGGCAGCAGCTTTTAACCGTGATATTAAAAGCTGACAAGGGGTCATaGTTGCATGGAGGATTTTCA +
Preference number: 5 (lower is better)
Translates to: LVDNVLANWQQLLTVILKADKGS*LHGGFS
Trigger: TGAAAATCCTCCATGCAACAATGACCCCTTGTCAGC...TTTTAATATCACGGTTAAAAGCTGCTGCCAGTTAGCCAAGACATTATCCACCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CAA 90 bp TTGGTGGATAATGTCTTGGCTAACTGGCAGCAGCTTTTAACCGTGATATTAAAAAATGCTTCTGGCTCTTaGGAACATTCCTCTGGCTCA +
Preference number: 5 (lower is better)
Translates to: LVDNVLANWQQLLTVILKNASGS*EHSSGS
Trigger: TGAGCCAGAGGAATGTTCCAAAGAGCCAGAAGCATT...TTTTAATATCACGGTTAAAAGCTGCTGCCAGTTAGCCAAGACATTATCCACCAA
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CAA 90 bp TGTGACTGTGTTGTTGTTTCTCTCGTTTTTAACCATGTCGACAGGCAGGAAATGCTTCAATGCACACATTaGTATCTGCATGTGCCACAT +
Preference number: 5 (lower is better)
Translates to: CDCVVVSLVFNHVDRQEMLQCTH*YLHVPH
Trigger: ATGTGGCACATGCAGATACAAATGTGTGCATTGAAG...CATTTCCTGCCTGTCGACATGGTTAAAAACGAGAGAAACAACAACACAGTCACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CAA 90 bp TTGGTGGATAATGTCTTGGCTAACTGGCAGCAGCTTTTAACCGTGATATTAAAACTTCATTTTCCTATTTaGTGGAGTGGGGCAGTGGGA +
Preference number: 5 (lower is better)
Translates to: LVDNVLANWQQLLTVILKLHFPI*WSGAVG
Trigger: TCCCACTGCCCCACTCCACAAAATAGGAAAATGAAG...TTTTAATATCACGGTTAAAAGCTGCTGCCAGTTAGCCAAGACATTATCCACCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CAA 90 bp TTGGTGGATAATGTCTTGGCTAACTGGCAGCAGCTTTTAACCGTGATATTAAAATTGGTGGATAATGTCTaGGCTAACTGGCAGCAGCTT +
Preference number: 5 (lower is better)
Translates to: LVDNVLANWQQLLTVILKLVDNV*ANWQQL
Trigger: AAGCTGCTGCCAGTTAGCCAAGACATTATCCACCAA...TTTTAATATCACGGTTAAAAGCTGCTGCCAGTTAGCCAAGACATTATCCACCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CAA 90 bp AACATTAGGTTTCGTAGAAACCTAAGAATAGCATTGTACGAGGAGTGGAAACAAACACACCATCGGATTTaGCGTGGGGCTACCATTTCA +
Preference number: 5 (lower is better)
Translates to: NIRFRRNLRIALYEEWKQTHHRI*RGATIS
Trigger: TGAAATGGTAGCCCCACGCAAAATCCGATGGTGTGT...TTGTTTCCACTCCTCGTACAATGCTATTCTTAGGTTTCTACGAAACCTAATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650260.1
CDS TCA 90 bp ACACCGGAACTTGTGTGCTGGGAAAACAGTGAAAATTCCTTCTTCTaGACTGAAATATTGCCACTTAATTCCAGGGTTGGATTTCAGGTT +
Preference number: 5 (lower is better)
Translates to: TPELVCWENSENSFF*TEILPLNSRVGFQV
Trigger: AACCTGAAATCCAACCCTGGAATTAAGTGGCAATATTTCAGTTCAGAAGAAGGAATTTTCACTGTTTTCCCAGCACACAAGTTCCGGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000290039.6
ENST00000470527.1
ENST00000495994.5
ENST00000650260.1
ENST00000651257.2
CDS GCA 90 bp CCAAACTTGGTGAAAATAAAAGCTTGCAGAAATACAGTCAGCAGATaGGTGATCACTCAATTGTTCACCCTACCTAGGCTTTCTGAGTTT +
Preference number: 5 (lower is better)
Translates to: PNLVKIKACRNTVSR*VITQLFTLPRLSEF
Trigger: AAACTCAGAAAGCCTAGGTAGGGTGAACAATTGAGTGATCACGCATCTGCTGACTGTATTTCTGCAAGCTTTTATTTTCACCAAGTTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486580.1
CDS-3UTR CAA 90 bp CTGTTACCTTCCATTAGTGTTATGGCAGGTCTGTTCATCAGGCTTATTTCCCCTATTGTTCTAGACACATaGGTATTAAAGTTCCCATCG +
Preference number: 5 (lower is better)
Translates to: LLPSISVMAGLFIRLISPIVLDT*VLKFPS
Trigger: CGATGGGAACTTTAATACCAATGTGTCTAGAACAAT...AGGGGAAATAAGCCTGATGAACAGACCTGCCATAACACTAATGGAAGGTAACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CAA 90 bp TTCCAACTACATATAAACGGAGATTTACCACACACATTCTTTACCATGGTGCAAGGAAGCCAAAGAGTCTaGGTAATACGTCACGTCTTC +
Preference number: 5 (lower is better)
Translates to: FQLHINGDLPHTFFTMVQGSQRV*VIRHVF
Trigger: GAAGACGTGACGTATTACCAAGACTCTTTGGCTTCC...TTGCACCATGGTAAAGAATGTGTGTGGTAAATCTCCGTTTATATGTAGTTGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CAA 90 bp GCTAAGAAACAAAGCGAAATCTTCAATGCACACATTTGTATCTGCATGTGCCACCACAGGTATTTCTGGTaGTATCACCACAATACACAG +
Preference number: 5 (lower is better)
Translates to: AKKQSEIFNAHICICMCHHRYFW*YHHNTQ
Trigger: CTGTGTATTGTGGTGATACAACCAGAAATACCTGTG...GTGGCACATGCAGATACAAATGTGTGCATTGAAGATTTCGCTTTGTTTCTTAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CAA 90 bp TTCCAACTACATATAAACGGAGATTTACCACACACATTCTTTACCATGGTGCAACTGCTGGGAACAGTGTaGAGGTTCTTCAGTTGTTTC +
Preference number: 5 (lower is better)
Translates to: FQLHINGDLPHTFFTMVQLLGTV*RFFSCF
Trigger: GAAACAACTGAAGAACCTCAACACTGTTCCCAGCAG...TTGCACCATGGTAAAGAATGTGTGTGGTAAATCTCCGTTTATATGTAGTTGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CAA 90 bp TTCCAACTACATATAAACGGAGATTTACCACACACATTCTTTACCATGGTGCAATTTCTGACAGAGAATTaGAGGCCCGGGTTAGCAATG +
Preference number: 5 (lower is better)
Translates to: FQLHINGDLPHTFFTMVQFLTEN*RPGLAM
Trigger: CATTGCTAACCCGGGCCTCAAATTCTCTGTCAGAAA...TTGCACCATGGTAAAGAATGTGTGTGGTAAATCTCCGTTTATATGTAGTTGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CAA 90 bp CTGTTACCTTCCATTAGTGTTATGGCAGGTCTGTTCATCAGGCTTATTTCCCCTTTTTTCTTTACAAAGTaGGGGTGGTTGAGGATATCA +
Preference number: 5 (lower is better)
Translates to: LLPSISVMAGLFIRLISPFFFTK*GWLRIS
Trigger: TGATATCCTCAACCACCCCAACTTTGTAAAGAAAAA...AGGGGAAATAAGCCTGATGAACAGACCTGCCATAACACTAATGGAAGGTAACAG
41% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CAA 90 bp TTCCAACTACATATAAACGGAGATTTACCACACACATTCTTTACCATGGTGCAACTTGCTAATCTGTATTaGGAACAGTGGCTGCCATGC +
Preference number: 5 (lower is better)
Translates to: FQLHINGDLPHTFFTMVQLANLY*EQWLPC
Trigger: GCATGGCAGCCACTGTTCCAAATACAGATTAGCAAG...TTGCACCATGGTAAAGAATGTGTGTGGTAAATCTCCGTTTATATGTAGTTGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CAA 90 bp AACATTAGGTTTCGTAGAAACCTAAGAATAGCATTGTACGAGGAGTGGAAACAACTTGCTAATCTGTATTaGGAACAGTGGCTGCCATGC +
Preference number: 5 (lower is better)
Translates to: NIRFRRNLRIALYEEWKQLANLY*EQWLPC
Trigger: GCATGGCAGCCACTGTTCCAAATACAGATTAGCAAG...TTGTTTCCACTCCTCGTACAATGCTATTCTTAGGTTTCTACGAAACCTAATGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CAA 90 bp AACATTAGGTTTCGTAGAAACCTAAGAATAGCATTGTACGAGGAGTGGAAACAATCACCTCATCACCTATaGCTCCCATGTCATCAACGT +
Preference number: 5 (lower is better)
Translates to: NIRFRRNLRIALYEEWKQSPHHL*LPCHQR
Trigger: ACGTTGATGACATGGGAGCAATAGGTGATGAGGTGA...TTGTTTCCACTCCTCGTACAATGCTATTCTTAGGTTTCTACGAAACCTAATGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CAA 90 bp GTTGTTGTTTCTCTCGTTTTTAACCATGTCGACAGGCAGGAAATGACTCAAACACTTCAATGCACACATTaGTATCTGCATGTGCCACAT +
Preference number: 5 (lower is better)
Translates to: VVVSLVFNHVDRQEMTQTLQCTH*YLHVPH
Trigger: ATGTGGCACATGCAGATACAAATGTGTGCATTGAAG...TGTTTGAGTCATTTCCTGCCTGTCGACATGGTTAAAAACGAGAGAAACAACAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CAA 90 bp TTCCAACTACATATAAACGGAGATTTACCACACACATTCTTTACCATGGTGCAACTTCATTTTCCTATTTaGTGGAGTGGGGCAGTGGGA +
Preference number: 5 (lower is better)
Translates to: FQLHINGDLPHTFFTMVQLHFPI*WSGAVG
Trigger: TCCCACTGCCCCACTCCACAAAATAGGAAAATGAAG...TTGCACCATGGTAAAGAATGTGTGTGGTAAATCTCCGTTTATATGTAGTTGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CAA 90 bp AACATTAGGTTTCGTAGAAACCTAAGAATAGCATTGTACGAGGAGTGGAAACAATTGGTGGATAATGTCTaGGCTAACTGGCAGCAGCTT +
Preference number: 5 (lower is better)
Translates to: NIRFRRNLRIALYEEWKQLVDNV*ANWQQL
Trigger: AAGCTGCTGCCAGTTAGCCAAGACATTATCCACCAA...TTGTTTCCACTCCTCGTACAATGCTATTCTTAGGTTTCTACGAAACCTAATGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS GCA 90 bp TGTGCTGGGAAAACAGTGAAAATTCCTTCTTCTGAACTGAAATATTaGCACTTAATTCCAGGGTTGGATTTCAGGTTGTCTGCAAGAACT +
Preference number: 5 (lower is better)
Translates to: CAGKTVKIPSSELKY*HLIPGLDFRLSART
Trigger: AGTTCTTGCAGACAACCTGAAATCCAACCCTGGAATTAAGTGGCAATATTTCAGTTCAGAAGAAGGAATTTTCACTGTTTTCCCAGCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000290039.6
ENST00000470527.1
ENST00000495994.5
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CAA 90 bp ACATATAAACGGAGATTTACCACACACATTCTTTACCATGGTGCAAGAATGCCTGTTAACACAGAAATCTaGTCATGTTCATCGATGGCG +
Preference number: 5 (lower is better)
Translates to: TYKRRFTTHILYHGARMPVNTEI*SCSSMA
Trigger: CGCCATCGATGAACATGACAAGATTTCTGTGTTAAC...AGGCATTCTTGCACCATGGTAAAGAATGTGTGTGGTAAATCTCCGTTTATATGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CAA 90 bp TTGGTGGATAATGTCTTGGCTAACTGGCAGCAGCTTTTAACCGTGATATTAAAAGTTAACACAGAAATCTaGTCATGTTCATCGATGGCG +
Preference number: 5 (lower is better)
Translates to: LVDNVLANWQQLLTVILKVNTEI*SCSSMA
Trigger: CGCCATCGATGAACATGACAAGATTTCTGTGTTAAC...TTTTAATATCACGGTTAAAAGCTGCTGCCAGTTAGCCAAGACATTATCCACCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CAA 90 bp ACATATAAACGGAGATTTACCACACACATTCTTTACCATGGTGCAAGAATGCCTCACAGGTATTTCTGGTaGTATCACCACAATACACAG +
Preference number: 5 (lower is better)
Translates to: TYKRRFTTHILYHGARMPHRYFW*YHHNTQ
Trigger: CTGTGTATTGTGGTGATACAACCAGAAATACCTGTG...AGGCATTCTTGCACCATGGTAAAGAATGTGTGTGGTAAATCTCCGTTTATATGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CAA 90 bp TTGGTGGATAATGTCTTGGCTAACTGGCAGCAGCTTTTAACCGTGATATTAAAAAAGCACCTTATTTTGTaGCCACCATCTTGGTTACAG +
Preference number: 5 (lower is better)
Translates to: LVDNVLANWQQLLTVILKKHLIL*PPSWLQ
Trigger: CTGTAACCAAGATGGTGGCAACAAAATAAGGTGCTT...TTTTAATATCACGGTTAAAAGCTGCTGCCAGTTAGCCAAGACATTATCCACCAA
40% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CAA 90 bp TTCCAACTACATATAAACGGAGATTTACCACACACATTCTTTACCATGGTGCAATGGTTCCTGGGATCCTaGCTAATCTGTATTTGGAAC +
Preference number: 5 (lower is better)
Translates to: FQLHINGDLPHTFFTMVQWFLGS*LICIWN
Trigger: GTTCCAAATACAGATTAGCAAGGATCCCAGGAACCA...TTGCACCATGGTAAAGAATGTGTGTGGTAAATCTCCGTTTATATGTAGTTGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CAA 90 bp TGTGACTGTGTTGTTGTTTCTCTCGTTTTTAACCATGTCGACAGGCAGGAAATGACATTCACATTCATTTaGTTCCATTCGGTGACAGTT +
Preference number: 5 (lower is better)
Translates to: CDCVVVSLVFNHVDRQEMTFTFI*FHSVTV
Trigger: AACTGTCACCGAATGGAACAAAATGAATGTGAATGT...CATTTCCTGCCTGTCGACATGGTTAAAAACGAGAGAAACAACAACACAGTCACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CAA 90 bp GCTAAGAAACAAAGCGAAATCTTCAATGCACACATTTGTATCTGCATGTGCCACAACCTAAGAATAGCATaGTACGAGGAGTGGAAACAA +
Preference number: 5 (lower is better)
Translates to: AKKQSEIFNAHICICMCHNLRIA*YEEWKQ
Trigger: TTGTTTCCACTCCTCGTACAATGCTATTCTTAGGTT...GTGGCACATGCAGATACAAATGTGTGCATTGAAGATTTCGCTTTGTTTCTTAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CAA 90 bp GCTAAGAAACAAAGCGAAATCTTCAATGCACACATTTGTATCTGCATGTGCCACTGGAACTTTGTGTTATaGTTTGTACTTCGAATCAGC +
Preference number: 5 (lower is better)
Translates to: AKKQSEIFNAHICICMCHWNFVL*FVLRIS
Trigger: GCTGATTCGAAGTACAAACAATAACACAAAGTTCCA...GTGGCACATGCAGATACAAATGTGTGCATTGAAGATTTCGCTTTGTTTCTTAGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CAA 90 bp AACATTAGGTTTCGTAGAAACCTAAGAATAGCATTGTACGAGGAGTGGAAACAACACAGGTATTTCTGGTaGTATCACCACAATACACAG +
Preference number: 5 (lower is better)
Translates to: NIRFRRNLRIALYEEWKQHRYFW*YHHNTQ
Trigger: CTGTGTATTGTGGTGATACAACCAGAAATACCTGTG...TTGTTTCCACTCCTCGTACAATGCTATTCTTAGGTTTCTACGAAACCTAATGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CAA 90 bp TTCCAACTACATATAAACGGAGATTTACCACACACATTCTTTACCATGGTGCAAAAGCACCTTATTTTGTaGCCACCATCTTGGTTACAG +
Preference number: 5 (lower is better)
Translates to: FQLHINGDLPHTFFTMVQKHLIL*PPSWLQ
Trigger: CTGTAACCAAGATGGTGGCAACAAAATAAGGTGCTT...TTGCACCATGGTAAAGAATGTGTGTGGTAAATCTCCGTTTATATGTAGTTGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CAA 90 bp GCTAAGAAACAAAGCGAAATCTTCAATGCACACATTTGTATCTGCATGTGCCACTTTTTCTTTACAAAGTaGGGGTGGTTGAGGATATCA +
Preference number: 5 (lower is better)
Translates to: AKKQSEIFNAHICICMCHFFFTK*GWLRIS
Trigger: TGATATCCTCAACCACCCCAACTTTGTAAAGAAAAA...GTGGCACATGCAGATACAAATGTGTGCATTGAAGATTTCGCTTTGTTTCTTAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CAA 90 bp AACATTAGGTTTCGTAGAAACCTAAGAATAGCATTGTACGAGGAGTGGAAACAACTGTCACTGAAGCTGTaGCACAGGTTTTTCTTTACA +
Preference number: 5 (lower is better)
Translates to: NIRFRRNLRIALYEEWKQLSLKL*HRFFFT
Trigger: TGTAAAGAAAAACCTGTGCAACAGCTTCAGTGACAG...TTGTTTCCACTCCTCGTACAATGCTATTCTTAGGTTTCTACGAAACCTAATGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CAA 90 bp TTCCAACTACATATAAACGGAGATTTACCACACACATTCTTTACCATGGTGCAACTGTCACTGAAGCTGTaGCACAGGTTTTTCTTTACA +
Preference number: 5 (lower is better)
Translates to: FQLHINGDLPHTFFTMVQLSLKL*HRFFFT
Trigger: TGTAAAGAAAAACCTGTGCAACAGCTTCAGTGACAG...TTGCACCATGGTAAAGAATGTGTGTGGTAAATCTCCGTTTATATGTAGTTGGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CAA 90 bp GTTGTTGTTTCTCTCGTTTTTAACCATGTCGACAGGCAGGAAATGACTCAAACAAATGTGACTGTGTTGTaGTTTCTCTCGTTTTTAACC +
Preference number: 5 (lower is better)
Translates to: VVVSLVFNHVDRQEMTQTNVTVL*FLSFLT
Trigger: GGTTAAAAACGAGAGAAACAACAACACAGTCACATT...TGTTTGAGTCATTTCCTGCCTGTCGACATGGTTAAAAACGAGAGAAACAACAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CAA 90 bp ACATATAAACGGAGATTTACCACACACATTCTTTACCATGGTGCAAGAATGCCTAACCTAAGAATAGCATaGTACGAGGAGTGGAAACAA +
Preference number: 5 (lower is better)
Translates to: TYKRRFTTHILYHGARMPNLRIA*YEEWKQ
Trigger: TTGTTTCCACTCCTCGTACAATGCTATTCTTAGGTT...AGGCATTCTTGCACCATGGTAAAGAATGTGTGTGGTAAATCTCCGTTTATATGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CAA 90 bp TTGGTGGATAATGTCTTGGCTAACTGGCAGCAGCTTTTAACCGTGATATTAAAATGGAACTTTGTGTTATaGTTTGTACTTCGAATCAGC +
Preference number: 5 (lower is better)
Translates to: LVDNVLANWQQLLTVILKWNFVL*FVLRIS
Trigger: GCTGATTCGAAGTACAAACAATAACACAAAGTTCCA...TTTTAATATCACGGTTAAAAGCTGCTGCCAGTTAGCCAAGACATTATCCACCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CAA 90 bp TTCCAACTACATATAAACGGAGATTTACCACACACATTCTTTACCATGGTGCAAAAGCTATTTTCTTCATaGATGACTTGGAGAGTCGCT +
Preference number: 5 (lower is better)
Translates to: FQLHINGDLPHTFFTMVQKLFSS*MTWRVA
Trigger: AGCGACTCTCCAAGTCATCAATGAAGAAAATAGCTT...TTGCACCATGGTAAAGAATGTGTGTGGTAAATCTCCGTTTATATGTAGTTGGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CAA 90 bp AACATTAGGTTTCGTAGAAACCTAAGAATAGCATTGTACGAGGAGTGGAAACAAAATAAAGGAAGTGTCTaGTACCATCTTCCAGGCATA +
Preference number: 5 (lower is better)
Translates to: NIRFRRNLRIALYEEWKQNKGSV*YHLPGI
Trigger: TATGCCTGGAAGATGGTACAAGACACTTCCTTTATT...TTGTTTCCACTCCTCGTACAATGCTATTCTTAGGTTTCTACGAAACCTAATGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CAA 90 bp TTCCAACTACATATAAACGGAGATTTACCACACACATTCTTTACCATGGTGCAAATGAAGCACCTTATTTaGTTGCCACCATCTTGGTTA +
Preference number: 5 (lower is better)
Translates to: FQLHINGDLPHTFFTMVQMKHLI*LPPSWL
Trigger: TAACCAAGATGGTGGCAACAAAATAAGGTGCTTCAT...TTGCACCATGGTAAAGAATGTGTGTGGTAAATCTCCGTTTATATGTAGTTGGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CAA 90 bp ACATATAAACGGAGATTTACCACACACATTCTTTACCATGGTGCAAGAATGCCTACATTCACATTCATTTaGTTCCATTCGGTGACAGTT +
Preference number: 5 (lower is better)
Translates to: TYKRRFTTHILYHGARMPTFTFI*FHSVTV
Trigger: AACTGTCACCGAATGGAACAAAATGAATGTGAATGT...AGGCATTCTTGCACCATGGTAAAGAATGTGTGTGGTAAATCTCCGTTTATATGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CAA 90 bp ACATATAAACGGAGATTTACCACACACATTCTTTACCATGGTGCAAGAATGCCTAATGTGACTGTGTTGTaGTTTCTCTCGTTTTTAACC +
Preference number: 5 (lower is better)
Translates to: TYKRRFTTHILYHGARMPNVTVL*FLSFLT
Trigger: GGTTAAAAACGAGAGAAACAACAACACAGTCACATT...AGGCATTCTTGCACCATGGTAAAGAATGTGTGTGGTAAATCTCCGTTTATATGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CAA 90 bp TTCCAACTACATATAAACGGAGATTTACCACACACATTCTTTACCATGGTGCAATGGAACTTTGTGTTATaGTTTGTACTTCGAATCAGC +
Preference number: 5 (lower is better)
Translates to: FQLHINGDLPHTFFTMVQWNFVL*FVLRIS
Trigger: GCTGATTCGAAGTACAAACAATAACACAAAGTTCCA...TTGCACCATGGTAAAGAATGTGTGTGGTAAATCTCCGTTTATATGTAGTTGGAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CAA 90 bp AACATTAGGTTTCGTAGAAACCTAAGAATAGCATTGTACGAGGAGTGGAAACAATTTTTCTTTACAAAGTaGGGGTGGTTGAGGATATCA +
Preference number: 5 (lower is better)
Translates to: NIRFRRNLRIALYEEWKQFFFTK*GWLRIS
Trigger: TGATATCCTCAACCACCCCAACTTTGTAAAGAAAAA...TTGTTTCCACTCCTCGTACAATGCTATTCTTAGGTTTCTACGAAACCTAATGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS-3UTR CAA 90 bp TTCCAACTACATATAAACGGAGATTTACCACACACATTCTTTACCATGGTGCAAAATGTGACTGTGTTGTaGTTTCTCTCGTTTTTAACC +
Preference number: 5 (lower is better)
Translates to: FQLHINGDLPHTFFTMVQNVTVL*FLSFLT
Trigger: GGTTAAAAACGAGAGAAACAACAACACAGTCACATT...TTGCACCATGGTAAAGAATGTGTGTGGTAAATCTCCGTTTATATGTAGTTGGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290039.6
ENST00000650260.1
ENST00000651257.2
CDS GCA 72 bp TCGGCCGCCAGCCTCCGCATCTGGCTCGCCAGCACTTaGGCCTCGTCCAGGATGGAGAAGTCGGCTTCGGCC +
Preference number: 6 (lower is better)
Translates to: SAASLRIWLAST*ASSRMEKSASA
Trigger: GGCCGAAGCCGACTTCTCCATCCTGGACGAGGCGCAAGTGCTGGCGAGCCAGATGCGGAGGCTGGCGGCCGA
69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290039.6
ENST00000651257.2
CDS CAA 72 bp CTCGGCCGCCAGCCTCCGCATCTGGCTCGCCAGCACTaGCGCCTCGTCCAGGATGGAGAAGTCGGCTTCGGC +
Preference number: 6 (lower is better)
Translates to: LGRQPPHLARQH*RLVQDGEVGFG
Trigger: GCCGAAGCCGACTTCTCCATCCTGGACGAGGCGCAAGTGCTGGCGAGCCAGATGCGGAGGCTGGCGGCCGAG
69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290039.6
ENST00000651257.2
CDS GCA 72 bp AAGCGCGGCGCACCCCGCAAAAGTTTCTTCCTCTGTTaGAGGCTCTGCTCCGCGCCGCGGTGGCGAAGGCTC +
Preference number: 6 (lower is better)
Translates to: KRGAPRKSFFLC*RLCSAPRWRRL
Trigger: GAGCCTTCGCCACCGCGGCGCGGAGCAGAGCCTGCAACAGAGGAAGAAACTTTTGCGGGGTGCGCCGCGCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651257.2
CDS CCA 72 bp TTCTTCCTCTGTTGCAGGCTCTGCTCCGCGCCGCGGTaGCGAAGGCTCCCAAACTTAGGGGGCGCCCGGCTA +
Preference number: 6 (lower is better)
Translates to: FFLCCRLCSAPR*RRLPNLGGARL
Trigger: TAGCCGGGCGCCCCCTAAGTTTGGGAGCCTTCGCCACCGCGGCGCGGAGCAGAGCCTGCAACAGAGGAAGAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651257.2
CDS CAA 72 bp AAAGCGCGGCGCACCCCGCAAAAGTTTCTTCCTCTGTaGCAGGCTCTGCTCCGCGCCGCGGTGGCGAAGGCT +
Preference number: 6 (lower is better)
Translates to: KARRTPQKFLPL*QALLRAAVAKA
Trigger: AGCCTTCGCCACCGCGGCGCGGAGCAGAGCCTGCAACAGAGGAAGAAACTTTTGCGGGGTGCGCCGCGCTTT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651257.2
CDS GCA 72 bp GGGCTCCTTGTGGGTGATGTGCTGCTGCTCCACAGGTaGATGTCCTTTGGGGTCGATGAGAGTCGGGTGCGC +
Preference number: 6 (lower is better)
Translates to: GLLVGDVLLLHR*MSFGVDESRVR
Trigger: GCGCACCCGACTCTCATCGACCCCAAAGGACATGCACCTGTGGAGCAGCAGCACATCACCCACAAGGAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290039.6
ENST00000470527.1
ENST00000495994.5
ENST00000650260.1
ENST00000651257.2
CDS TCA 72 bp GCTGCTGCTCCACAGGTGCATGTCCTTTGGGGTCGATaGGAGTCGGGTGCGCCACCAGATAACCCCTGTCCT +
Preference number: 6 (lower is better)
Translates to: AAAPQVHVLWGR*ESGAPPDNPCP
Trigger: AGGACAGGGGTTATCTGGTGGCGCACCCGACTCTCATCGACCCCAAAGGACATGCACCTGTGGAGCAGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000290039.6
ENST00000470527.1
ENST00000495994.5
ENST00000650260.1
ENST00000651257.2
CDS CCA 72 bp AGGCAAGCACTGGGCTGGCCAAGGAGATCCAGCCGGTaGTACAGCAGCTTGCTGCTGGGAACAGTGTTGAGG +
Preference number: 6 (lower is better)
Translates to: RQALGWPRRSSR*YSSLLLGTVLR
Trigger: CCTCAACACTGTTCCCAGCAGCAAGCTGCTGTACCACCGGCTGGATCTCCTTGGCCAGCCCAGTGCTTGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290039.6
ENST00000470527.1
ENST00000495994.5
ENST00000650260.1
ENST00000651257.2
CDS CCA 72 bp GCCCATCGGCAGTTCCTGGTCGGCCTTGCTCGCACCTaGCACTTAAGAAGGCGTGCAGACTGCAATGACTGG +
Preference number: 6 (lower is better)
Translates to: AHRQFLVGLART*HLRRRADCNDW
Trigger: CCAGTCATTGCAGTCTGCACGCCTTCTTAAGTGCCAGGTGCGAGCAAGGCCGACCAGGAACTGCCGATGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495994.5
ENST00000650260.1
CDS TCA 72 bp ATGAATGTGTGGCAGGTGGCAGTCCAGTCTGACAGGTaGAGCCCATCGGCAGTTCCTGGTCGGCCTTGCTCG +
Preference number: 6 (lower is better)
Translates to: MNVWQVAVQSDR*SPSAVPGRPCS
Trigger: CGAGCAAGGCCGACCAGGAACTGCCGATGGGCTTCACCTGTCAGACTGGACTGCCACCTGCCACACATTCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495994.5
ENST00000650260.1
CDS CCA 72 bp AGGCCAGGGTCAATAGCTGTGTATGTCACCGGCTCCTaGTGGACCTCGCAGCTGGGGTTTCGGTTCTCTGCA +
Preference number: 6 (lower is better)
Translates to: RPGSIAVYVTGS*WTSQLGFRFSA
Trigger: TGCAGAGAACCGAAACCCCAGCTGCGAGGTCCACCAGGAGCCGGTGACATACACAGCTATTGACCCTGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290039.6
ENST00000470527.1
ENST00000495994.5
ENST00000650260.1
ENST00000651257.2
CDS CCA 72 bp CCAGGGTCAATAGCTGTGTATGTCACCGGCTCCTGGTaGACCTCGCAGCTGGGGTTTCGGTTCTCTGCATTG +
Preference number: 6 (lower is better)
Translates to: PGSIAVYVTGSW*TSQLGFRFSAL
Trigger: CAATGCAGAGAACCGAAACCCCAGCTGCGAGGTCCACCAGGAGCCGGTGACATACACAGCTATTGACCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290039.6
ENST00000470527.1
ENST00000495994.5
ENST00000650260.1
ENST00000651257.2
CDS TCA 72 bp TGTAGTGCTCTACCATGCGCTTTGTCTCTGGCTGGCTaGGGTGCTCATAGGGGGAGGAAAAGCTGCCAGCAG +
Preference number: 6 (lower is better)
Translates to: CSALPCALSLAG*GAHRGRKSCQQ
Trigger: CTGCTGGCAGCTTTTCCTCCCCCTATGAGCACCTCAGCCAGCCAGAGACAAAGCGCATGGTAGAGCACTACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000290039.6
ENST00000470527.1
ENST00000495994.5
ENST00000650260.1
ENST00000651257.2
CDS TCA 72 bp AAGTTCAATGAATGTGTGGCAGGTGGCAGTCCAGTCTaGCAGGTGAAGCCCATCGGCAGTTCCTGGTCGGCC +
Preference number: 6 (lower is better)
Translates to: KFNECVAGGSPV*QVKPIGSSWSA
Trigger: GGCCGACCAGGAACTGCCGATGGGCTTCACCTGTCAGACTGGACTGCCACCTGCCACACATTCATTGAACTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495994.5
ENST00000650260.1
CDS CCA 72 bp ATGGTGGGACTTTCTAGGGTTGCCAGCTGTTTGAAGTaGAGGCAAGCACTGGGCTGGCCAAGGAGATCCAGC +
Preference number: 6 (lower is better)
Translates to: MVGLSRVASCLK*RQALGWPRRSS
Trigger: GCTGGATCTCCTTGGCCAGCCCAGTGCTTGCCTCCACTTCAAACAGCTGGCAACCCTAGAAAGTCCCACCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290039.6
ENST00000470527.1
ENST00000495994.5
ENST00000650260.1
ENST00000651257.2
CDS CCA 72 bp ATAGGCGGTGTAGTGCTCTACCATGCGCTTTGTCTCTaGCTGGCTGAGGTGCTCATAGGGGGAGGAAAAGCT +
Preference number: 6 (lower is better)
Translates to: IGGVVLYHALCL*LAEVLIGGGKA
Trigger: AGCTTTTCCTCCCCCTATGAGCACCTCAGCCAGCCAGAGACAAAGCGCATGGTAGAGCACTACACCGCCTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000290039.6
ENST00000470527.1
ENST00000495994.5
ENST00000650260.1
ENST00000651257.2
CDS CAA 72 bp AGCATGATGGTGGGACTTTCTAGGGTTGCCAGCTGTTaGAAGTGGAGGCAAGCACTGGGCTGGCCAAGGAGA +
Preference number: 6 (lower is better)
Translates to: SMMVGLSRVASC*KWRQALGWPRR
Trigger: TCTCCTTGGCCAGCCCAGTGCTTGCCTCCACTTCAAACAGCTGGCAACCCTAGAAAGTCCCACCATCATGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290039.6
ENST00000470527.1
ENST00000495994.5
ENST00000650260.1
ENST00000651257.2
CDS CAA 72 bp TCGCAGCTGGGGTTTCGGTTCTCTGCATTGGTGAGGTaGCCAGTGCACTCATTGACCTCTAGAGGGCACTCA +
Preference number: 6 (lower is better)
Translates to: SQLGFRFSALVR*PVHSLTSRGHS
Trigger: TGAGTGCCCTCTAGAGGTCAATGAGTGCACTGGCAACCTCACCAATGCAGAGAACCGAAACCCCAGCTGCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290039.6
ENST00000470527.1
ENST00000495994.5
ENST00000650260.1
ENST00000651257.2
CDS CAA 90 bp CATTCTGTAGCTCCCAGATCTCATCTTGGCGTGGAGGTGAGGAGATaGTTAGCATTCTGCATCGACAGTGTGTACCGTGACGGCCGCCTG +
Preference number: 6 (lower is better)
Translates to: HSVAPRSHLGVEVRR*LAFCIDSVYRDGRL
Trigger: CAGGCGGCCGTCACGGTACACACTGTCGATGCAGAATGCTAACAATCTCCTCACCTCCACGCCAAGATGAGATCTGGGAGCTACAGAATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290039.6
ENST00000470527.1
ENST00000495994.5
ENST00000650260.1
ENST00000651257.2
CDS TCA 72 bp TGCAGGCACAGAAGGCAAGAGAGTCGCAGGTTTCGTTaGCAATGCCAACAAACGCGTTGGTTCCTGGGATCC +
Preference number: 6 (lower is better)
Translates to: CRHRRQESRRFR*QCQQTRWFLGS
Trigger: GGATCCCAGGAACCAACGCGTTTGTTGGCATTGTCAACGAAACCTGCGACTCTCTTGCCTTCTGTGCCTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290039.6
ENST00000470527.1
ENST00000495994.5
ENST00000650260.1
ENST00000651257.2
CDS TCA 72 bp TCGCACCTGGCACTTAAGAAGGCGTGCAGACTGCAATaGCTGGGCAGTTCCTCCACACACCATCGGATTTTG +
Preference number: 6 (lower is better)
Translates to: SHLALKKACRLQ*LGSSSTHHRIL
Trigger: CAAAATCCGATGGTGTGTGGAGGAACTGCCCAGTCATTGCAGTCTGCACGCCTTCTTAAGTGCCAGGTGCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495994.5
ENST00000650260.1
CDS CCA 72 bp ACCTGGCACTTAAGAAGGCGTGCAGACTGCAATGACTaGGCAGTTCCTCCACACACCATCGGATTTTGCGTG +
Preference number: 6 (lower is better)
Translates to: TWHLRRRADCND*AVPPHTIGFCV
Trigger: CACGCAAAATCCGATGGTGTGTGGAGGAACTGCCCAGTCATTGCAGTCTGCACGCCTTCTTAAGTGCCAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495994.5
ENST00000650260.1
CDS CAA 72 bp ACTGCACCTGCTGTTGACACACTGGTGAAGAGCATCTaGCAGGCCAGGGTCAATAGCTGTGTATGTCACCGG +
Preference number: 6 (lower is better)
Translates to: TAPAVDTLVKSI*QARVNSCVCHR
Trigger: CCGGTGACATACACAGCTATTGACCCTGGCCTGCAAGATGCTCTTCACCAGTGTGTCAACAGCAGGTGCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290039.6
ENST00000470527.1
ENST00000495994.5
ENST00000650260.1
ENST00000651257.2
CDS GCA 72 bp CTGGGATCCTTGCTAATCTGTATTTGGAACAGTGGCTaGCATGCACAAGGTTCGTCAAATCCCCCGCAAGGC +
Preference number: 6 (lower is better)
Translates to: LGSLLICIWNSG*HAQGSSNPPQG
Trigger: GCCTTGCGGGGGATTTGACGAACCTTGTGCATGGCAGCCACTGTTCCAAATACAGATTAGCAAGGATCCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000290039.6
ENST00000470527.1
ENST00000495994.5
ENST00000650260.1
ENST00000651257.2
CDS CCA 72 bp TCCGGTTGGGAAGGTTTGTGTAGAACCTGCCCACTGTaGTCTCCAGGTTGCTCAACTGATTCAGCACCATCA +
Preference number: 6 (lower is better)
Translates to: SGWEGLCRTCPL*SPGCSTDSAPS
Trigger: TGATGGTGCTGAATCAGTTGAGCAACCTGGAGACCACAGTGGGCAGGTTCTACACAAACCTTCCCAACCGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290039.6
ENST00000470527.1
ENST00000495994.5
ENST00000650260.1
ENST00000651257.2
CDS CCA 72 bp CAAGACAGGGATGAGTTCACAGGGACTGCGATAATCTaGCTGCCCAGAGGGAGGCTTAGGATATTTTGCCGA +
Preference number: 6 (lower is better)
Translates to: QDRDEFTGTAII*LPRGRLRIFCR
Trigger: TCGGCAAAATATCCTAAGCCTCCCTCTGGGCAGCCAGATTATCGCAGTCCCTGTGAACTCATCCCTGTCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290039.6
ENST00000470527.1
ENST00000495994.5
ENST00000650260.1
ENST00000651257.2
CDS CAA 72 bp GCTCCCAGATCTCATCTTGGCGTGGAGGTGAGGAGATaGTTAGCATTCTGCATCGACAGTGTGTACCGTGAC +
Preference number: 6 (lower is better)
Translates to: APRSHLGVEVRR*LAFCIDSVYRD
Trigger: GTCACGGTACACACTGTCGATGCAGAATGCTAACAATCTCCTCACCTCCACGCCAAGATGAGATCTGGGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290039.6
ENST00000470527.1
ENST00000495994.5
ENST00000650260.1
ENST00000651257.2
CDS CAA 90 bp ATGCCAACAAACGCGTTGGTTCCTGGGATCCTTGCTAATCTGTATTaGGAACAGTGGCTGCCATGCACAAGGTTCGTCAAATCCCCCGCA +
Preference number: 6 (lower is better)
Translates to: MPTNALVPGILANLY*EQWLPCTRFVKSPA
Trigger: TGCGGGGGATTTGACGAACCTTGTGCATGGCAGCCACTGTTCCAAATACAGATTAGCAAGGATCCCAGGAACCAACGCGTTTGTTGGCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000290039.6
ENST00000470527.1
ENST00000495994.5
ENST00000650260.1
ENST00000651257.2
CDS TCA 72 bp AGCGTCCTTGGCAATCTGAAGCTGAGTGTCTGTGACTaGAGCCCCGTGGTCCAGAATCACTACTATGTGCTT +
Preference number: 6 (lower is better)
Translates to: SVLGNLKLSVCD*SPVVQNHYYVL
Trigger: AAGCACATAGTAGTGATTCTGGACCACGGGGCTTCAGTCACAGACACTCAGCTTCAGATTGCCAAGGACGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290039.6
ENST00000470527.1
ENST00000650260.1
ENST00000651257.2
CDS TCA 72 bp GAGATTGTTAGCATTCTGCATCGACAGTGTGTACCGTaGCGGCCGCCTGTAAGTGGTGGCTATGATGAAGTG +
Preference number: 6 (lower is better)
Translates to: EIVSILHRQCVP*RPPVSGGYDEV
Trigger: CACTTCATCATAGCCACCACTTACAGGCGGCCGTCACGGTACACACTGTCGATGCAGAATGCTAACAATCTC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290039.6
ENST00000470527.1
ENST00000495994.5
ENST00000650260.1
ENST00000651257.2
CDS TCA 72 bp CGCCAAGCACAGCGGCAGTGCTTATTAAAAGTTCAATaGATGTGTGGCAGGTGGCAGTCCAGTCTGACAGGT +
Preference number: 6 (lower is better)
Translates to: RQAQRQCLLKVQ*MCGRWQSSLTG
Trigger: ACCTGTCAGACTGGACTGCCACCTGCCACACATTCATTGAACTTTTAATAAGCACTGCCGCTGTGCTTGGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495994.5
ENST00000650260.1
CDS GCA 72 bp ATCCTTGCTAATCTGTATTTGGAACAGTGGCTGCCATaGACAAGGTTCGTCAAATCCCCCGCAAGGCTGGTG +
Preference number: 6 (lower is better)
Translates to: ILANLYLEQWLP*TRFVKSPARLV
Trigger: CACCAGCCTTGCGGGGGATTTGACGAACCTTGTGCATGGCAGCCACTGTTCCAAATACAGATTAGCAAGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000290039.6
ENST00000470527.1
ENST00000495994.5
ENST00000650260.1
ENST00000651257.2
CDS GCA 72 bp GTTTGTCCAGGTGAGTCTTTCCATCACTGTCCACCATaGACCATTCACAATCCAGCACCCCAAAACAGTCCC +
Preference number: 6 (lower is better)
Translates to: VCPGESFHHCPP*TIHNPAPQNSP
Trigger: GGGACTGTTTTGGGGTGCTGGATTGTGAATGGTGCATGGTGGACAGTGATGGAAAGACTCACCTGGACAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000290039.6
ENST00000470527.1
ENST00000495994.5
ENST00000650260.1
ENST00000651257.2
CDS CAA 72 bp CGGTTCTCTGCATTGGTGAGGTTGCCAGTGCACTCATaGACCTCTAGAGGGCACTCACAAGGACATTCACAT +
Preference number: 6 (lower is better)
Translates to: RFSALVRLPVHS*TSRGHSQGHSH
Trigger: ATGTGAATGTCCTTGTGAGTGCCCTCTAGAGGTCAATGAGTGCACTGGCAACCTCACCAATGCAGAGAACCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290039.6
ENST00000470527.1
ENST00000495994.5
ENST00000650260.1
ENST00000651257.2
CDS CAA 90 bp TCTTCGTGGCTGTCGTCGTCCCTTTCATCTCTGTCATTCTCCAGGTaGGACATACGCACTGACATTTCTTGGGCAGCAAGAGGAGACATA +
Preference number: 6 (lower is better)
Translates to: SSWLSSSLSSLSFSR*DIRTDISWAARGDI
Trigger: TATGTCTCCTCTTGCTGCCCAAGAAATGTCAGTGCGTATGTCCAACCTGGAGAATGACAGAGATGAAAGGGACGACGACAGCCACGAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290039.6
ENST00000470527.1
ENST00000495994.5
ENST00000650260.1
ENST00000651257.2
CDS TCA 72 bp AGTTTCTCTCAGCTTGTTTATGTGCCAAGACAGGGATaGGTTCACAGGGACTGCGATAATCTGGCTGCCCAG +
Preference number: 6 (lower is better)
Translates to: SFSQLVYVPRQG*VHRDCDNLAAQ
Trigger: CTGGGCAGCCAGATTATCGCAGTCCCTGTGAACTCATCCCTGTCTTGGCACATAAACAAGCTGAGAGAAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290039.6
ENST00000470527.1
ENST00000495994.5
ENST00000650260.1
ENST00000651257.2
CDS TCA 72 bp GCCGGTGGTACAGCAGCTTGCTGCTGGGAACAGTGTTaGGGTTCTTCAGTTGTTTCACAGGTATTTCTGGTT +
Preference number: 6 (lower is better)
Translates to: AGGTAACCWEQC*GSSVVSQVFLV
Trigger: AACCAGAAATACCTGTGAAACAACTGAAGAACCTCAACACTGTTCCCAGCAGCAAGCTGCTGTACCACCGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290039.6
ENST00000470527.1
ENST00000495994.5
ENST00000650260.1
ENST00000651257.2
CDS GCA 72 bp CATCAATCATCCGGTTGGGAAGGTTTGTGTAGAACCTaGCCACTGTGGTCTCCAGGTTGCTCAACTGATTCA +
Preference number: 6 (lower is better)
Translates to: HQSSGWEGLCRT*PLWSPGCSTDS
Trigger: TGAATCAGTTGAGCAACCTGGAGACCACAGTGGGCAGGTTCTACACAAACCTTCCCAACCGGATGATTGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290039.6
ENST00000470527.1
ENST00000495994.5
ENST00000650260.1
ENST00000651257.2
CDS CCA 72 bp TGTCGTCGTCCCTTTCATCTCTGTCATTCTCCAGGTTaGACATACGCACTGACATTTCTTGGGCAGCAAGAG +
Preference number: 6 (lower is better)
Translates to: CRRPFHLCHSPG*TYALTFLGQQE
Trigger: CTCTTGCTGCCCAAGAAATGTCAGTGCGTATGTCCAACCTGGAGAATGACAGAGATGAAAGGGACGACGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290039.6
ENST00000470527.1
ENST00000495994.5
ENST00000650260.1
ENST00000651257.2
CDS CCA 72 bp ATAAACCGAGTGTTGCTGATGATGCCTCTGTCTTCGTaGCTGTCGTCGTCCCTTTCATCTCTGTCATTCTCC +
Preference number: 6 (lower is better)
Translates to: INRVLLMMPLSS*LSSSLSSLSFS
Trigger: GGAGAATGACAGAGATGAAAGGGACGACGACAGCCACGAAGACAGAGGCATCATCAGCAACACTCGGTTTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290039.6
ENST00000470527.1
ENST00000495994.5
ENST00000650260.1
ENST00000651257.2
CDS CAA 72 bp CTGTCGTCGTCCCTTTCATCTCTGTCATTCTCCAGGTaGGACATACGCACTGACATTTCTTGGGCAGCAAGA +
Preference number: 6 (lower is better)
Translates to: LSSSLSSLSFSR*DIRTDISWAAR
Trigger: TCTTGCTGCCCAAGAAATGTCAGTGCGTATGTCCAACCTGGAGAATGACAGAGATGAAAGGGACGACGACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290039.6
ENST00000470527.1
ENST00000495994.5
ENST00000650260.1
ENST00000651257.2
CDS CAA 90 bp AAGGCAAGAGAGTCGCAGGTTTCGTTGACAATGCCAACAAACGCGTaGGTTCCTGGGATCCTTGCTAATCTGTATTTGGAACAGTGGCTG +
Preference number: 6 (lower is better)
Translates to: KARESQVSLTMPTNA*VPGILANLYLEQWL
Trigger: CAGCCACTGTTCCAAATACAGATTAGCAAGGATCCCAGGAACCAACGCGTTTGTTGGCATTGTCAACGAAACCTGCGACTCTCTTGCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290039.6
ENST00000470527.1
ENST00000495994.5
ENST00000650260.1
ENST00000651257.2
CDS TCA 72 bp CTTTTGGAATCCCACTGCGTGCTGGGTAGGACTGTCTaGAGACTTCACGCTGCTAACAAAGGTGGACATTTT +
Preference number: 6 (lower is better)
Translates to: LLESHCVLGRTV*RLHAANKGGHF
Trigger: AAAATGTCCACCTTTGTTAGCAGCGTGAAGTCTTCAGACAGTCCTACCCAGCACGCAGTGGGATTCCAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290039.6
ENST00000470527.1
ENST00000495994.5
ENST00000650260.1
ENST00000651257.2
CDS GCA 72 bp GGAACCAGGATAAATTCTGAGGACGCCATTGGGTGTTaGTATGTAACGGCGGACAATGTAAGTGTTCAGGCT +
Preference number: 6 (lower is better)
Translates to: GTRINSEDAIGC*YVTADNVSVQA
Trigger: AGCCTGAACACTTACATTGTCCGCCGTTACATAGCAACACCCAATGGCGTCCTCAGAATTTATCCTGGTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000290039.6
ENST00000470527.1
ENST00000486580.1
ENST00000495994.5
ENST00000650260.1
ENST00000651257.2
CDS GCA 72 bp TTTCTTTACAAAGTTGGGGTGGTTGAGGATATCATTTaGTACCAGGGGCTCCTTGTGGGTGATGTGCTGCTG +
Preference number: 6 (lower is better)
Translates to: FLYKVGVVEDII*YQGLLVGDVLL
Trigger: CAGCAGCACATCACCCACAAGGAGCCCCTGGTAGCAAATGATATCCTCAACCACCCCAACTTTGTAAAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000290039.6
ENST00000470527.1
ENST00000495994.5
ENST00000650260.1
ENST00000651257.2
CDS GCA 72 bp ACAGTTAACACAGAAATCTACTGCGGTGTTCGTAGCTaGCCTTACACCGGAACTTGTGTGCTGGGAAAACAG +
Preference number: 6 (lower is better)
Translates to: TVNTEIYCGVRS*PYTGTCVLGKQ
Trigger: CTGTTTTCCCAGCACACAAGTTCCGGTGTAAGGGCAGCTACGAACACCGCAGTAGATTTCTGTGTTAACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495994.5
CDS CCA 72 bp ACGCGTTGGTTCCTGGGATCCTTGCTAATCTGTATTTaGAACAGTGGCTGCCATGCACAAGGTTCGTCAAAT +
Preference number: 6 (lower is better)
Translates to: TRWFLGSLLICI*NSGCHAQGSSN
Trigger: ATTTGACGAACCTTGTGCATGGCAGCCACTGTTCCAAATACAGATTAGCAAGGATCCCAGGAACCAACGCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290039.6
ENST00000470527.1
ENST00000495994.5
ENST00000650260.1
ENST00000651257.2
CDS CAA 72 bp AACGCGTTGGTTCCTGGGATCCTTGCTAATCTGTATTaGGAACAGTGGCTGCCATGCACAAGGTTCGTCAAA +
Preference number: 6 (lower is better)
Translates to: NALVPGILANLY*EQWLPCTRFVK
Trigger: TTTGACGAACCTTGTGCATGGCAGCCACTGTTCCAAATACAGATTAGCAAGGATCCCAGGAACCAACGCGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290039.6
ENST00000470527.1
ENST00000495994.5
ENST00000650260.1
ENST00000651257.2
CDS CAA 90 bp ACTGCAGCTCAGTTCTCGACCCCTGAATTTAAGTCTCGTCCTGGATaGAAGGCCCGGCTATTAACAGTAGTAGAAAGTCGATCACAACTA +
Preference number: 6 (lower is better)
Translates to: TAAQFSTPEFKSRPG*KARLLTVVESRSQL
Trigger: TAGTTGTGATCGACTTTCTACTACTGTTAATAGCCGGGCCTTCAATCCAGGACGAGACTTAAATTCAGGGGTCGAGAACTGAGCTGCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470527.1
CDS CAA 72 bp GAGTCGCAGGTTTCGTTGACAATGCCAACAAACGCGTaGGTTCCTGGGATCCTTGCTAATCTGTATTTGGAA +
Preference number: 6 (lower is better)
Translates to: ESQVSLTMPTNA*VPGILANLYLE
Trigger: TTCCAAATACAGATTAGCAAGGATCCCAGGAACCAACGCGTTTGTTGGCATTGTCAACGAAACCTGCGACTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290039.6
ENST00000470527.1
ENST00000495994.5
ENST00000650260.1
ENST00000651257.2
CDS CAA 72 bp CAGTTCTCGACCCCTGAATTTAAGTCTCGTCCTGGATaGAAGGCCCGGCTATTAACAGTAGTAGAAAGTCGA +
Preference number: 6 (lower is better)
Translates to: QFSTPEFKSRPG*KARLLTVVESR
Trigger: TCGACTTTCTACTACTGTTAATAGCCGGGCCTTCAATCCAGGACGAGACTTAAATTCAGGGGTCGAGAACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470527.1
CDS CAA 90 bp TATGTAACGGCGGACAATGTAAGTGTTCAGGCTACTCATTTCCATTaGTGTCATCCATTCATCTGTGACGTGGCTGGTAGCCATTACTTC +
Preference number: 6 (lower is better)
Translates to: YVTADNVSVQATHFH*CHPFICDVAGSHYF
Trigger: GAAGTAATGGCTACCAGCCACGTCACAGATGAATGGATGACACAAATGGAAATGAGTAGCCTGAACACTTACATTGTCCGCCGTTACATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000290039.6
ENST00000470527.1
ENST00000486580.1
ENST00000495994.5
ENST00000650260.1
ENST00000651257.2
CDS GCA 72 bp TGCATGGAGATACCATTGTCTCCTAGTGGGATCAAATaGTTTGTCCATGAGGGAACCAGGATAAATTCTGAG +
Preference number: 6 (lower is better)
Translates to: CMEIPLSPSGIK*FVHEGTRINSE
Trigger: CTCAGAATTTATCCTGGTTCCCTCATGGACAAAGCATTTGATCCCACTAGGAGACAATGGTATCTCCATGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000290039.6
ENST00000470527.1
ENST00000486580.1
ENST00000495994.5
ENST00000650260.1
ENST00000651257.2
CDS TCA 72 bp TGGAACTTTGTGTTATTGTTTGTACTTCGAATCAGCTaGAATGCCTTTTGGAATCCCACTGCGTGCTGGGTA +
Preference number: 6 (lower is better)
Translates to: WNFVLLFVLRIS*NAFWNPTACWV
Trigger: TACCCAGCACGCAGTGGGATTCCAAAAGGCATTTCAGCTGATTCGAAGTACAAACAATAACACAAAGTTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290039.6
ENST00000470527.1
ENST00000495994.5
ENST00000650260.1
ENST00000651257.2
CDS CAA 72 bp TTGTCTGCAAGAACTGAATTTAAGTCTCGTCCTGGATaGAAGGCCCGGCTATTAACAGTAGTAGAAAGTCGA +
Preference number: 6 (lower is better)
Translates to: LSARTEFKSRPG*KARLLTVVESR
Trigger: TCGACTTTCTACTACTGTTAATAGCCGGGCCTTCAATCCAGGACGAGACTTAAATTCAGTTCTTGCAGACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290039.6
ENST00000495994.5
ENST00000650260.1
ENST00000651257.2
CDS CAA 72 bp TGCAGAAATACAGTCAGCAGATGCGTGATCACTCAATaGTTCACCCTACCTAGGCTTTCTGAGTTTAAGAAG +
Preference number: 6 (lower is better)
Translates to: CRNTVSRCVITQ*FTLPRLSEFKK
Trigger: CTTCTTAAACTCAGAAAGCCTAGGTAGGGTGAACAATTGAGTGATCACGCATCTGCTGACTGTATTTCTGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486580.1
CDS CAA 90 bp GATTTCAGGTTGTCTGCAAGAACTGAATTTAAGTCTCGTCCTGGATaGAAGGCCCGGCTATTAACAGTAGTAGAAAGTCGATCACAACTA +
Preference number: 6 (lower is better)
Translates to: DFRLSARTEFKSRPG*KARLLTVVESRSQL
Trigger: TAGTTGTGATCGACTTTCTACTACTGTTAATAGCCGGGCCTTCAATCCAGGACGAGACTTAAATTCAGTTCTTGCAGACAACCTGAAATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290039.6
ENST00000495994.5
ENST00000650260.1
ENST00000651257.2
CDS TCA 72 bp AAGACAGCTGTGTACTGGATGAATGAATTGTGTGACTaGTTGTCACAACATAACCAGCTCCTCCAACATCTA +
Preference number: 6 (lower is better)
Translates to: KTAVYWMNELCD*LSQHNQLLQHL
Trigger: TAGATGTTGGAGGAGCTGGTTATGTTGTGACAATCAGTCACACAATTCATTCATCCAGTACACAGCTGTCTT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290039.6
ENST00000470527.1
ENST00000495994.5
ENST00000650260.1
ENST00000651257.2
CDS GCA 72 bp TCAAACAAAGTAATACACATAAACTGTTTGGAACACTaGCAGACACCTAGAGAGCATTCAATAGGCCGTCGT +
Preference number: 6 (lower is better)
Translates to: SNKVIHINCLEH*QTPREHSIGRR
Trigger: ACGACGGCCTATTGAATGCTCTCTAGGTGTCTGGCAGTGTTCCAAACAGTTTATGTGTATTACTTTGTTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495994.5
ENST00000650260.1
CDS CAA 90 bp GGGAACAGTGTTGAGGTTCTTCAGTTGTTTCACAGGTATTTCTGGTaGTATCACCACAATACACAGAATAAAGGAAGTGTCTTGTACCAT +
Preference number: 6 (lower is better)
Translates to: GNSVEVLQLFHRYFW*YHHNTQNKGSVLYH
Trigger: ATGGTACAAGACACTTCCTTTATTCTGTGTATTGTGGTGATACAACCAGAAATACCTGTGAAACAACTGAAGAACCTCAACACTGTTCCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290039.6
ENST00000470527.1
ENST00000495994.5
ENST00000650260.1
ENST00000651257.2
CDS CAA 90 bp AAAATTCCTTCTTCTGAACTGAAATATTGCCACTTAATTCCAGGGTaGGATTTCAGGTTGTCTGCAAGAACTTGGAGATACTGCAGCTCA +
Preference number: 6 (lower is better)
Translates to: KIPSSELKYCHLIPG*DFRLSARTWRYCSS
Trigger: TGAGCTGCAGTATCTCCAAGTTCTTGCAGACAACCTGAAATCCAACCCTGGAATTAAGTGGCAATATTTCAGTTCAGAAGAAGGAATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470527.1
CDS TCA 72 bp CTCCATTTGAGATTTTCTCAGTGTAAACAAAGGAGTTaGATATCCGCTCATTGGTGGTTGGGAAGATCAAAC +
Preference number: 6 (lower is better)
Translates to: LHLRFSQCKQRS*ISAHWWLGRSN
Trigger: GTTTGATCTTCCCAACCACCAATGAGCGGATATTCAACTCCTTTGTTTACACTGAGAAAATCTCAAATGGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495994.5
ENST00000650260.1
CDS GCA 72 bp GGCTCTGACAATAAATATGGCCTGGTAAGAGATGGGTaGATAAGTGTATATCCTTTGTCGTCTATGAGAAAA +
Preference number: 6 (lower is better)
Translates to: GSDNKYGLVRDG*ISVYPLSSMRK
Trigger: TTTTCTCATAGACGACAAAGGATATACACTTATGCACCCATCTCTTACCAGGCCATATTTATTGTCAGAGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290039.6
ENST00000470527.1
ENST00000495994.5
ENST00000650260.1
ENST00000651257.2
CDS CAA 90 bp ATAAAAGCTTGCAGAAATACAGTCAGCAGATGCGTGATCACTCAATaGTTCACCCTACCTAGGCTTTCTGAGTTTAAGAAGAAAAATCCT +
Preference number: 6 (lower is better)
Translates to: IKACRNTVSRCVITQ*FTLPRLSEFKKKNP
Trigger: AGGATTTTTCTTCTTAAACTCAGAAAGCCTAGGTAGGGTGAACAATTGAGTGATCACGCATCTGCTGACTGTATTTCTGCAAGCTTTTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000486580.1
CDS CAA 72 bp GTTGAGGTTCTTCAGTTGTTTCACAGGTATTTCTGGTaGTATCACCACAATACACAGAATAAAGGAAGTGTC +
Preference number: 6 (lower is better)
Translates to: VEVLQLFHRYFW*YHHNTQNKGSV
Trigger: GACACTTCCTTTATTCTGTGTATTGTGGTGATACAACCAGAAATACCTGTGAAACAACTGAAGAACCTCAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290039.6
ENST00000470527.1
ENST00000495994.5
ENST00000650260.1
ENST00000651257.2
CDS CAA 90 bp AAAATTCCTTCTTCTGAACTGAAATATTGCCACTTAATTCCAGGGTaGGATTTCAGGTTGTCTGCAAGAACTGAATTTAAGTCTCGTCCT +
Preference number: 6 (lower is better)
Translates to: KIPSSELKYCHLIPG*DFRLSARTEFKSRP
Trigger: AGGACGAGACTTAAATTCAGTTCTTGCAGACAACCTGAAATCCAACCCTGGAATTAAGTGGCAATATTTCAGTTCAGAAGAAGGAATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290039.6
ENST00000495994.5
ENST00000650260.1
ENST00000651257.2
CDS CAA 72 bp CCATGTCTGTATTTGCTTGGAACTTTGTGTTATTGTTaGTACTTCGAATCAGCTGAAATGCCTTTTGGAATC +
Preference number: 6 (lower is better)
Translates to: PCLYLLGTLCYC*YFESAEMPFGI
Trigger: GATTCCAAAAGGCATTTCAGCTGATTCGAAGTACAAACAATAACACAAAGTTCCAAGCAAATACAGACATGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290039.6
ENST00000470527.1
ENST00000495994.5
ENST00000650260.1
ENST00000651257.2
CDS CAA 72 bp TTGGGAAGATCAAACAAAGTAATACACATAAACTGTTaGGAACACTGCCAGACACCTAGAGAGCATTCAATA +
Preference number: 6 (lower is better)
Translates to: LGRSNKVIHINC*EHCQTPREHSI
Trigger: TATTGAATGCTCTCTAGGTGTCTGGCAGTGTTCCAAACAGTTTATGTGTATTACTTTGTTTGATCTTCCCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495994.5
ENST00000650260.1
CDS CAA 90 bp TTAACAGTAGTAGAAAGTCGATCACAACTAATTGTTCTAGACACATaGGTATTAAAGTTCCCATCGAATTCCATCATGGAAGGTGGGATA +
Preference number: 6 (lower is better)
Translates to: LTVVESRSQLIVLDT*VLKFPSNSIMEGGI
Trigger: TATCCCACCTTCCATGATGGAATTCGATGGGAACTTTAATACCAATGTGTCTAGAACAATTAGTTGTGATCGACTTTCTACTACTGTTAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290039.6
ENST00000470527.1
ENST00000495994.5
ENST00000650260.1
ENST00000651257.2
CDS CAA 72 bp GTAGAAAGTCGATCACAACTAATTGTTCTAGACACATaGGTATTAAAGTTCCCATCGAATTCCATCATGGAA +
Preference number: 6 (lower is better)
Translates to: VESRSQLIVLDT*VLKFPSNSIME
Trigger: TTCCATGATGGAATTCGATGGGAACTTTAATACCAATGTGTCTAGAACAATTAGTTGTGATCGACTTTCTAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290039.6
ENST00000470527.1
ENST00000495994.5
ENST00000650260.1
ENST00000651257.2