RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CACFD1 (Homo sapiens)

Ensembl gene IDs: ENSG00000160325

Ensembl transcript IDs: ENST00000291722.11, ENST00000316948.9, ENST00000444798.1, ENST00000474734.5, ENST00000489519.1, ENST00000540581.5, ENST00000542192.5, ENST00000625786.2, ENST00000625979.2, ENST00000626867.1, ENST00000627083.2, ENST00000629431.2, ENST00000630697.1, ENST00000630997.2

Found 915 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CAGGGCCCAGAAAACCCCACGCCCAGCCCACCAGCCTGCCACTCCTaGCCTCAGATGCCACTCCCGGCCTCAGATGCCACTCCCAGCCTC +
Preference number: 1 (lower is better)
Translates to: QGPENPTPSPPACHS*PQMPLPASDATPSL
Trigger: GAGGCTGGGAGTGGCATCTGAGGCCGGGAGTGGCATCTGAGGCCAGGAGTGGCAGGCTGGTGGGCTGGGCGTGGGGTTTTCTGGGCCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR GCA 90 bp TTCTGCCAAACCCCACCTGGGCTAAGCCAGGCCCGACCAGGCACCTaGCCGATGGCTGAGAGCCAGCCTCACGGTCAGAGAGGCCAGCGG +
Preference number: 1 (lower is better)
Translates to: FCQTPPGLSQARPGT*PMAESQPHGQRGQR
Trigger: CCGCTGGCCTCTCTGACCGTGAGGCTGGCTCTCAGCCATCGGGCAGGTGCCTGGTCGGGCCTGGCTTAGCCCAGGTGGGGTTTGGCAGAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR CCA 90 bp GGCTGGGCTGTGGCTGATGTTGACGGGGCCACACCAGGGAGAGGGTaGGCACCCTCGGTGCCAGGGAGAGCCTGCTCTCCCCACTTCCTT +
Preference number: 1 (lower is better)
Translates to: GWAVADVDGATPGRG*APSVPGRACSPHFL
Trigger: AAGGAAGTGGGGAGAGCAGGCTCTCCCTGGCACCGAGGGTGCCCACCCTCTCCCTGGTGTGGCCCCGTCAACATCAGCCACAGCCCAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR CCA 90 bp GGAAGCTGCTCCCAGGTCACAGCAGGTCACAGGCAGCCCTGTCTGTaGTGTGAGATCTGCAGACCCACCCAGCAGAGGAGTAGGGCTGGG +
Preference number: 1 (lower is better)
Translates to: GSCSQVTAGHRQPCL*CEICRPTQQRSRAG
Trigger: CCCAGCCCTACTCCTCTGCTGGGTGGGTCTGCAGATCTCACACCACAGACAGGGCTGCCTGTGACCTGCTGTGACCTGGGAGCAGCTTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR CCA 90 bp CCAGTACCTGCGCTCCAGAAGCTCAGCGCAGGCCCAGCCTGGGGTTaGCCCCAGATGGAATATCTTCCACACCCGCCCGCTTCTGCCAAA +
Preference number: 1 (lower is better)
Translates to: PVPALQKLSAGPAWG*PQMEYLPHPPASAK
Trigger: TTTGGCAGAAGCGGGCGGGTGTGGAAGATATTCCATCTGGGGCCAACCCCAGGCTGGGCCTGCGCTGAGCTTCTGGAGCGCAGGTACTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR CCA 90 bp CAAGACCCAGTACCTGCGCTCCAGAAGCTCAGCGCAGGCCCAGCCTaGGGTTGGCCCCAGATGGAATATCTTCCACACCCGCCCGCTTCT +
Preference number: 1 (lower is better)
Translates to: QDPVPALQKLSAGPA*GWPQMEYLPHPPAS
Trigger: AGAAGCGGGCGGGTGTGGAAGATATTCCATCTGGGGCCAACCCCAGGCTGGGCCTGCGCTGAGCTTCTGGAGCGCAGGTACTGGGTCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR CCA 90 bp TGTAGGGACACGTGCAAAGGCCCCTCTCCAGGCTGTGCCTCAGCGTaGACAGTCCAGGCCTCACTTGGACCCACACAGAGCCAGAAGAGG +
Preference number: 1 (lower is better)
Translates to: CRDTCKGPSPGCASA*TVQASLGPTQSQKR
Trigger: CCTCTTCTGGCTCTGTGTGGGTCCAAGTGAGGCCTGGACTGTCCACGCTGAGGCACAGCCTGGAGAGGGGCCTTTGCACGTGTCCCTACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000625979.2
ENST00000629431.2
3UTR GCA 90 bp CCAGCTGTCCAGTCACTGCCAAGGCTGCAGTTCCAGGTACCGGGGTaGACCTTAGGAGCCCTGTGGGCTTCTTCAGAAGGCAGGGTGACA +
Preference number: 1 (lower is better)
Translates to: PAVQSLPRLQFQVPG*TLGALWASSEGRVT
Trigger: TGTCACCCTGCCTTCTGAAGAAGCCCACAGGGCTCCTAAGGTGCACCCCGGTACCTGGAACTGCAGCCTTGGCAGTGACTGGACAGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR GCA 90 bp GAGAGGTGTTCCTGGGAAACAGTTCACTTAGCAAGACCCAGTACCTaGGCTCCAGAAGCTCAGCGCAGGCCCAGCCTGGGGTTGGCCCCA +
Preference number: 1 (lower is better)
Translates to: ERCSWETVHLARPST*APEAQRRPSLGLAP
Trigger: TGGGGCCAACCCCAGGCTGGGCCTGCGCTGAGCTTCTGGAGCGCAGGTACTGGGTCTTGCTAAGTGAACTGTTTCCCAGGAACACCTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR TCA 90 bp CACACACACACACACACACACAGCCCTTTGAACCCAGCACTGGCCTaGGGAAGGTGGCCCCGGAGGAACCCTGAAGGCACATGTCCACCA +
Preference number: 1 (lower is better)
Translates to: HTHTHTHSPLNPALA*GRWPRRNPEGTCPP
Trigger: TGGTGGACATGTGCCTTCAGGGTTCCTCCGGGGCCACCTTCCTCAGGCCAGTGCTGGGTTCAAAGGGCTGTGTGTGTGTGTGTGTGTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR GCA 90 bp AGGGTACAGGGGCAGCCTTCCTTGATCCACAGCCAACCCTTCTCCTaGTGTCTCTGGCTGTCAGTGAGACCCCTCTGGAAAGGGCAGAAG +
Preference number: 1 (lower is better)
Translates to: RVQGQPSLIHSQPFS*CLWLSVRPLWKGQK
Trigger: CTTCTGCCCTTTCCAGAGGGGTCTCACTGACAGCCAGAGACAGCAGGAGAAGGGTTGGCTGTGGATCAAGGAAGGCTGCCCCTGTACCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR TCA 90 bp ATACACACACACACACACACACACACACACACACACACAGCCCTTTaGACCCAGCACTGGCCTGAGGAAGGTGGCCCCGGAGGAACCCTG +
Preference number: 1 (lower is better)
Translates to: IHTHTHTHTHTHTAL*TQHWPEEGGPGGTL
Trigger: CAGGGTTCCTCCGGGGCCACCTTCCTCAGGCCAGTGCTGGGTTCAAAGGGCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR CCA 90 bp ATGCCACTCCCAGCCTCAGACGCAGATGGGCCCGAGAGGTGTTCCTaGGAAACAGTTCACTTAGCAAGACCCAGTACCTGCGCTCCAGAA +
Preference number: 1 (lower is better)
Translates to: MPLPASDADGPERCS*ETVHLARPSTCAPE
Trigger: TTCTGGAGCGCAGGTACTGGGTCTTGCTAAGTGAACTGTTTCCCAGGAACACCTCTCGGGCCCATCTGCGTCTGAGGCTGGGAGTGGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR GCA 90 bp AGAAGGGAGCAGAGGGCAGGCACGCGAGCCACGGCCACGCTTTATTaGTTAAGACGCACACAGAACACAGAGGAACAAACAAGGAGGAAA +
Preference number: 1 (lower is better)
Translates to: RREQRAGTRATATLY*LRRTQNTEEQTRRK
Trigger: TTTCCTCCTTGTTTGTTCCTCTGTGTTCTGTGTGCGTCTTAAGCAATAAAGCGTGGCCGTGGCTCGCGTGCCTGCCCTCTGCTCCCTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR GCA 90 bp TTGTGGGAGGTAGACAGGTCTCACTGCATACATGGGACAGATGTGTaGACCCACACACATATACATACACACACACACACACACACACAC +
Preference number: 1 (lower is better)
Translates to: LWEVDRSHCIHGTDV*THTHIHTHTHTHTH
Trigger: GTGTGTGTGTGTGTGTGTGTGTGTATGTATATGTGTGTGGGTGCACACATCTGTCCCATGTATGCAGTGAGACCTGTCTACCTCCCACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR CCA 90 bp GCCCGCTTCTGCCAAACCCCACCTGGGCTAAGCCAGGCCCGACCAGGCACCTGCTGGCTCCGGACAGCCTaGCACCCAGGGCAGTGGGGA +
Preference number: 2 (lower is better)
Translates to: ARFCQTPPGLSQARPGTCWLRTA*HPGQWG
Trigger: TCCCCACTGCCCTGGGTGCCAGGCTGTCCGGAGCCA...GCAGGTGCCTGGTCGGGCCTGGCTTAGCCCAGGTGGGGTTTGGCAGAAGCGGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR TCA 90 bp CAGGCACCTGCCCGATGGCTGAGAGCCAGCCTCACGGTCAGAGAGGCCAGCGGGGCAGCCGAGGGGCCTTaGGGTGGCCTGTCCAAGGTT +
Preference number: 2 (lower is better)
Translates to: QAPARWLRASLTVREASGAAEGP*GGLSKV
Trigger: AACCTTGGACAGGCCACCTCAAGGCCCCTCGGCTGC...CCCGCTGGCCTCTCTGACCGTGAGGCTGGCTCTCAGCCATCGGGCAGGTGCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR TCA 90 bp GCCCGCTTCTGCCAAACCCCACCTGGGCTAAGCCAGGCCCGACCAGGCACCTGCGCCAGCAGGAGCACCTaGGTGGGGCTGAGGTCAGAC +
Preference number: 2 (lower is better)
Translates to: ARFCQTPPGLSQARPGTCASRST*VGLRSD
Trigger: GTCTGACCTCAGCCCCACTCAGGTGCTCCTGCTGGC...GCAGGTGCCTGGTCGGGCCTGGCTTAGCCCAGGTGGGGTTTGGCAGAAGCGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR GCA 90 bp GCCCGCTTCTGCCAAACCCCACCTGGGCTAAGCCAGGCCCGACCAGGCACCTGCTGGGGGAGGTCCCTCTaGTCAGTGCCCAGGTGGCAG +
Preference number: 2 (lower is better)
Translates to: ARFCQTPPGLSQARPGTCWGRSL*SVPRWQ
Trigger: CTGCCACCTGGGCACTGAGCAGAGGGACCTCCCCCA...GCAGGTGCCTGGTCGGGCCTGGCTTAGCCCAGGTGGGGTTTGGCAGAAGCGGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR GCA 90 bp CAGGCACCTGCCCGATGGCTGAGAGCCAGCCTCACGGTCAGAGAGGCCAGCGGGGGTGACAGTGGGCGCTaGACCCTAGGCAGCAGTGGG +
Preference number: 2 (lower is better)
Translates to: QAPARWLRASLTVREASGGDSGR*TLGSSG
Trigger: CCCACTGCTGCCTAGGGTGCAGCGCCCACTGTCACC...CCCGCTGGCCTCTCTGACCGTGAGGCTGGCTCTCAGCCATCGGGCAGGTGCCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR GCA 90 bp GCCCGCTTCTGCCAAACCCCACCTGGGCTAAGCCAGGCCCGACCAGGCACCTGCGGTGACAGTGGGCGCTaGACCCTAGGCAGCAGTGGG +
Preference number: 2 (lower is better)
Translates to: ARFCQTPPGLSQARPGTCGDSGR*TLGSSG
Trigger: CCCACTGCTGCCTAGGGTGCAGCGCCCACTGTCACC...GCAGGTGCCTGGTCGGGCCTGGCTTAGCCCAGGTGGGGTTTGGCAGAAGCGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR CCA 90 bp CAGGCACCTGCCCGATGGCTGAGAGCCAGCCTCACGGTCAGAGAGGCCAGCGGGTGCTCAGTGCCCAGGTaGCAGGGTCCCACTTGCCCC +
Preference number: 2 (lower is better)
Translates to: QAPARWLRASLTVREASGCSVPR*QGPTCP
Trigger: GGGGCAAGTGGGACCCTGCCACCTGGGCACTGAGCA...CCCGCTGGCCTCTCTGACCGTGAGGCTGGCTCTCAGCCATCGGGCAGGTGCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR TCA 90 bp GCCCGCTTCTGCCAAACCCCACCTGGGCTAAGCCAGGCCCGACCAGGCACCTGCCTTCAGAAGGCAGGGTaGCAGTGGGCGCTGCACCCT +
Preference number: 2 (lower is better)
Translates to: ARFCQTPPGLSQARPGTCLQKAG*QWALHP
Trigger: AGGGTGCAGCGCCCACTGTCACCCTGCCTTCTGAAG...GCAGGTGCCTGGTCGGGCCTGGCTTAGCCCAGGTGGGGTTTGGCAGAAGCGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR TCA 90 bp CAGGCACCTGCCCGATGGCTGAGAGCCAGCCTCACGGTCAGAGAGGCCAGCGGGCTCTGTGTGGGGAGGTaGCTGTGGCCTCTGCCCAGT +
Preference number: 2 (lower is better)
Translates to: QAPARWLRASLTVREASGLCVGR*LWPLPS
Trigger: ACTGGGCAGAGGCCACAGTCACCTCCCCACACAGAG...CCCGCTGGCCTCTCTGACCGTGAGGCTGGCTCTCAGCCATCGGGCAGGTGCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR GCA 90 bp GCTGTGGCTGATGTTGACGGGGCCACACCAGGGAGAGGGTGGGCACCCTCGGTGGGTCCCTCTGCTCAGTaGCCAGGTGGCAGGGTCCCA +
Preference number: 2 (lower is better)
Translates to: AVADVDGATPGRGWAPSVGPSAQ*PGGRVP
Trigger: TGGGACCCTGCCACCTGGGCACTGAGCAGAGGGACC...CACCGAGGGTGCCCACCCTCTCCCTGGTGTGGCCCCGTCAACATCAGCCACAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR CCA 90 bp GCTGTGGCTGATGTTGACGGGGCCACACCAGGGAGAGGGTGGGCACCCTCGGTGTGCTCAGTGCCCAGGTaGCAGGGTCCCACTTGCCCC +
Preference number: 2 (lower is better)
Translates to: AVADVDGATPGRGWAPSVCSVPR*QGPTCP
Trigger: GGGGCAAGTGGGACCCTGCCACCTGGGCACTGAGCA...CACCGAGGGTGCCCACCCTCTCCCTGGTGTGGCCCCGTCAACATCAGCCACAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR CCA 90 bp GCCCGCTTCTGCCAAACCCCACCTGGGCTAAGCCAGGCCCGACCAGGCACCTGCTCTCTGCATCCTCCCTaGGTAGGCCTGGCTCCGGAC +
Preference number: 2 (lower is better)
Translates to: ARFCQTPPGLSQARPGTCSLHPP*VGLAPD
Trigger: GTCCGGAGCCAGGCCTACCCAGGGAGGATGCAGAGA...GCAGGTGCCTGGTCGGGCCTGGCTTAGCCCAGGTGGGGTTTGGCAGAAGCGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR TCA 90 bp CAGGCACCTGCCCGATGGCTGAGAGCCAGCCTCACGGTCAGAGAGGCCAGCGGGGCCCTGTCTGTGGTGTaGGATCTGCAGACCCACCCA +
Preference number: 2 (lower is better)
Translates to: QAPARWLRASLTVREASGALSVV*DLQTHP
Trigger: TGGGTGGGTCTGCAGATCTCACACCACAGACAGGGC...CCCGCTGGCCTCTCTGACCGTGAGGCTGGCTCTCAGCCATCGGGCAGGTGCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR GCA 90 bp AGGCTGTCCCAGGCCCTGGGGCTCCACCTGCTAAGAGAGCTGGGGGAGGTCCCTCCCCTCTCCAGGCTGTaGCTCAGCGTGGACAGTCCA +
Preference number: 2 (lower is better)
Translates to: RLSQALGLHLLRELGEVPPLSRL*LSVDSP
Trigger: TGGACTGTCCACGCTGAGGCACAGCCTGGAGAGGGG...AGGGACCTCCCCCAGCTCTCTTAGCAGGTGGAGCCCCAGGGCCTGGGACAGCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR GCA 90 bp GCCCGCTTCTGCCAAACCCCACCTGGGCTAAGCCAGGCCCGACCAGGCACCTGCAGCTGCTGCAGGCTCTaGCTCAAGTCCAGCAGCCCA +
Preference number: 2 (lower is better)
Translates to: ARFCQTPPGLSQARPGTCSCCRL*LKSSSP
Trigger: TGGGCTGCTGGACTTGAGGCAGAGCCTGCAGCAGCT...GCAGGTGCCTGGTCGGGCCTGGCTTAGCCCAGGTGGGGTTTGGCAGAAGCGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR TCA 90 bp GGCCCAGCCTGGGGTTGGCCCCAGATGGAATATCTTCCACACCCGCCCGCTTCTGCAGCCGAGGGGCCTTaGGGTGGCCTGTCCAAGGTT +
Preference number: 2 (lower is better)
Translates to: GPAWGWPQMEYLPHPPASAAEGP*GGLSKV
Trigger: AACCTTGGACAGGCCACCTCAAGGCCCCTCGGCTGC...AGAAGCGGGCGGGTGTGGAAGATATTCCATCTGGGGCCAACCCCAGGCTGGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR TCA 90 bp GGCCCAGCCTGGGGTTGGCCCCAGATGGAATATCTTCCACACCCGCCCGCTTCTGCCAGCAGGAGCACCTaGGTGGGGCTGAGGTCAGAC +
Preference number: 2 (lower is better)
Translates to: GPAWGWPQMEYLPHPPASASRST*VGLRSD
Trigger: GTCTGACCTCAGCCCCACTCAGGTGCTCCTGCTGGC...AGAAGCGGGCGGGTGTGGAAGATATTCCATCTGGGGCCAACCCCAGGCTGGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR GCA 90 bp GCTGTGGCTGATGTTGACGGGGCCACACCAGGGAGAGGGTGGGCACCCTCGGTGAGGTGTAGGGACACGTaGAAAGGCCCCTCTCCAGGC +
Preference number: 2 (lower is better)
Translates to: AVADVDGATPGRGWAPSVRCRDT*KGPSPG
Trigger: GCCTGGAGAGGGGCCTTTGCACGTGTCCCTACACCT...CACCGAGGGTGCCCACCCTCTCCCTGGTGTGGCCCCGTCAACATCAGCCACAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR GCA 90 bp GCCCGCTTCTGCCAAACCCCACCTGGGCTAAGCCAGGCCCGACCAGGCACCTGCTGTCCACACAGCTGCTaGAGGCTCTGCCTCAAGTCC +
Preference number: 2 (lower is better)
Translates to: ARFCQTPPGLSQARPGTCCPHSC*RLCLKS
Trigger: GGACTTGAGGCAGAGCCTGCAGCAGCTGTGTGGACA...GCAGGTGCCTGGTCGGGCCTGGCTTAGCCCAGGTGGGGTTTGGCAGAAGCGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR GCA 90 bp GGCAGGCTGTCCCAGGCCCTGGGGCTCCACCTGCTAAGAGAGCTGGGGGAGGTCTGTCCACACAGCTGCTaGAGGCTCTGCCTCAAGTCC +
Preference number: 2 (lower is better)
Translates to: GRLSQALGLHLLRELGEVCPHSC*RLCLKS
Trigger: GGACTTGAGGCAGAGCCTGCAGCAGCTGTGTGGACA...GACCTCCCCCAGCTCTCTTAGCAGGTGGAGCCCCAGGGCCTGGGACAGCCTGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR GCA 90 bp CAGGCACCTGCCCGATGGCTGAGAGCCAGCCTCACGGTCAGAGAGGCCAGCGGGATCTCCAGGGGAAGCTaGTCCCAGGTCACAGCAGGT +
Preference number: 2 (lower is better)
Translates to: QAPARWLRASLTVREASGISRGS*SQVTAG
Trigger: ACCTGCTGTGACCTGGGAGCAGCTTCCCCTGGAGAT...CCCGCTGGCCTCTCTGACCGTGAGGCTGGCTCTCAGCCATCGGGCAGGTGCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR GCA 90 bp CTGCCAAGGCTGCAGTTCCAGGTACCGGGGTGCACCTTAGGAGCCCTGTGGGCTGGTCCCTCTGCTCAGTaGCCAGGTGGCAGGGTCCCA +
Preference number: 2 (lower is better)
Translates to: LPRLQFQVPGCTLGALWAGPSAQ*PGGRVP
Trigger: TGGGACCCTGCCACCTGGGCACTGAGCAGAGGGACC...AGCCCACAGGGCTCCTAAGGTGCACCCCGGTACCTGGAACTGCAGCCTTGGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR GCA 90 bp GGCCCAGCCTGGGGTTGGCCCCAGATGGAATATCTTCCACACCCGCCCGCTTCTGGTCCCTCTGCTCAGTaGCCAGGTGGCAGGGTCCCA +
Preference number: 2 (lower is better)
Translates to: GPAWGWPQMEYLPHPPASGPSAQ*PGGRVP
Trigger: TGGGACCCTGCCACCTGGGCACTGAGCAGAGGGACC...AGAAGCGGGCGGGTGTGGAAGATATTCCATCTGGGGCCAACCCCAGGCTGGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR GCA 90 bp CCACCCAGCTGTCCAGTCACTGCCAAGGCTGCAGTTCCAGGTACCGGGGTGCACGGTCCCTCTGCTCAGTaGCCAGGTGGCAGGGTCCCA +
Preference number: 2 (lower is better)
Translates to: PPSCPVTAKAAVPGTGVHGPSAQ*PGGRVP
Trigger: TGGGACCCTGCCACCTGGGCACTGAGCAGAGGGACC...GTGCACCCCGGTACCTGGAACTGCAGCCTTGGCAGTGACTGGACAGCTGGGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR GCA 90 bp GGCCCAGCCTGGGGTTGGCCCCAGATGGAATATCTTCCACACCCGCCCGCTTCTGGTGACAGTGGGCGCTaGACCCTAGGCAGCAGTGGG +
Preference number: 2 (lower is better)
Translates to: GPAWGWPQMEYLPHPPASGDSGR*TLGSSG
Trigger: CCCACTGCTGCCTAGGGTGCAGCGCCCACTGTCACC...AGAAGCGGGCGGGTGTGGAAGATATTCCATCTGGGGCCAACCCCAGGCTGGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR GCA 90 bp GGGGTTGGCCCCAGATGGAATATCTTCCACACCCGCCCGCTTCTGCCAAACCCCGGTGGGCACCCTCGGTaGCAGGGAGAGCCTGCTCTC +
Preference number: 2 (lower is better)
Translates to: GVGPRWNIFHTRPLLPNPGGHPR*QGEPAL
Trigger: GAGAGCAGGCTCTCCCTGGCACCGAGGGTGCCCACC...GGGGTTTGGCAGAAGCGGGCGGGTGTGGAAGATATTCCATCTGGGGCCAACCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR GCA 90 bp GCCCGCTTCTGCCAAACCCCACCTGGGCTAAGCCAGGCCCGACCAGGCACCTGCGAGGGAATATGGGGGTaGACATCCTGGGCACCAGCT +
Preference number: 2 (lower is better)
Translates to: ARFCQTPPGLSQARPGTCEGIWG*TSWAPA
Trigger: AGCTGGTGCCCAGGATGTGCACCCCCATATTCCCTC...GCAGGTGCCTGGTCGGGCCTGGCTTAGCCCAGGTGGGGTTTGGCAGAAGCGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR CCA 90 bp GCCCGCTTCTGCCAAACCCCACCTGGGCTAAGCCAGGCCCGACCAGGCACCTGCAGGCAGCCCTGTCTGTaGTGTGAGATCTGCAGACCC +
Preference number: 2 (lower is better)
Translates to: ARFCQTPPGLSQARPGTCRQPCL*CEICRP
Trigger: GGGTCTGCAGATCTCACACCACAGACAGGGCTGCCT...GCAGGTGCCTGGTCGGGCCTGGCTTAGCCCAGGTGGGGTTTGGCAGAAGCGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR CCA 90 bp GGCAGGCTGTCCCAGGCCCTGGGGCTCCACCTGCTAAGAGAGCTGGGGGAGGTCAGGCAGCCCTGTCTGTaGTGTGAGATCTGCAGACCC +
Preference number: 2 (lower is better)
Translates to: GRLSQALGLHLLRELGEVRQPCL*CEICRP
Trigger: GGGTCTGCAGATCTCACACCACAGACAGGGCTGCCT...GACCTCCCCCAGCTCTCTTAGCAGGTGGAGCCCCAGGGCCTGGGACAGCCTGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR CCA 90 bp GGCCCAGCCTGGGGTTGGCCCCAGATGGAATATCTTCCACACCCGCCCGCTTCTCACCCTAGGCAGCAGTaGGAGGTTGCTGGCAGCGGC +
Preference number: 2 (lower is better)
Translates to: GPAWGWPQMEYLPHPPASHPRQQ*EVAGSG
Trigger: GCCGCTGCCAGCAACCTCCCACTGCTGCCTAGGGTG...AGAAGCGGGCGGGTGTGGAAGATATTCCATCTGGGGCCAACCCCAGGCTGGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR CCA 90 bp GGCCCAGCCTGGGGTTGGCCCCAGATGGAATATCTTCCACACCCGCCCGCTTCTTGGCACCCAGGGCAGTaGGGACAGCTCTGTGTGGGG +
Preference number: 2 (lower is better)
Translates to: GPAWGWPQMEYLPHPPASWHPGQ*GQLCVG
Trigger: CCCCACACAGAGCTGTCCCCACTGCCCTGGGTGCCA...AGAAGCGGGCGGGTGTGGAAGATATTCCATCTGGGGCCAACCCCAGGCTGGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR CCA 90 bp GCCACTCCCAGCCTCAGACGCAGATGGGCCCGAGAGGTGTTCCTGGGAAACAGTTGGCTCCGGACAGCCTaGCACCCAGGGCAGTGGGGA +
Preference number: 2 (lower is better)
Translates to: ATPSLRRRWAREVFLGNSWLRTA*HPGQWG
Trigger: TCCCCACTGCCCTGGGTGCCAGGCTGTCCGGAGCCA...ACTGTTTCCCAGGAACACCTCTCGGGCCCATCTGCGTCTGAGGCTGGGAGTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR TCA 90 bp GCCACTCCCAGCCTCAGACGCAGATGGGCCCGAGAGGTGTTCCTGGGAAACAGTCACCTGCCCGATGGCTaGGAGCCAGCCTCACGGTCA +
Preference number: 2 (lower is better)
Translates to: ATPSLRRRWAREVFLGNSHLPDG*EPASRS
Trigger: TGACCGTGAGGCTGGCTCTCAGCCATCGGGCAGGTG...ACTGTTTCCCAGGAACACCTCTCGGGCCCATCTGCGTCTGAGGCTGGGAGTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR GCA 90 bp AGGCTGTCCCAGGCCCTGGGGCTCCACCTGCTAAGAGAGCTGGGGGAGGTCCCTTGTCCACACAGCTGCTaGAGGCTCTGCCTCAAGTCC +
Preference number: 2 (lower is better)
Translates to: RLSQALGLHLLRELGEVPCPHSC*RLCLKS
Trigger: GGACTTGAGGCAGAGCCTGCAGCAGCTGTGTGGACA...AGGGACCTCCCCCAGCTCTCTTAGCAGGTGGAGCCCCAGGGCCTGGGACAGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR GCA 90 bp GCTGTGGCTGATGTTGACGGGGCCACACCAGGGAGAGGGTGGGCACCCTCGGTGTGTCCACACAGCTGCTaGAGGCTCTGCCTCAAGTCC +
Preference number: 2 (lower is better)
Translates to: AVADVDGATPGRGWAPSVCPHSC*RLCLKS
Trigger: GGACTTGAGGCAGAGCCTGCAGCAGCTGTGTGGACA...CACCGAGGGTGCCCACCCTCTCCCTGGTGTGGCCCCGTCAACATCAGCCACAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR GCA 90 bp AGGCTGTCCCAGGCCCTGGGGCTCCACCTGCTAAGAGAGCTGGGGGAGGTCCCTATCTCCAGGGGAAGCTaGTCCCAGGTCACAGCAGGT +
Preference number: 2 (lower is better)
Translates to: RLSQALGLHLLRELGEVPISRGS*SQVTAG
Trigger: ACCTGCTGTGACCTGGGAGCAGCTTCCCCTGGAGAT...AGGGACCTCCCCCAGCTCTCTTAGCAGGTGGAGCCCCAGGGCCTGGGACAGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR GCA 90 bp GTCACTGCCAAGGCTGCAGTTCCAGGTACCGGGGTGCACCTTAGGAGCCCTGTGGGTCCCTCTGCTCAGTaGCCAGGTGGCAGGGTCCCA +
Preference number: 2 (lower is better)
Translates to: VTAKAAVPGTGVHLRSPVGPSAQ*PGGRVP
Trigger: TGGGACCCTGCCACCTGGGCACTGAGCAGAGGGACC...CACAGGGCTCCTAAGGTGCACCCCGGTACCTGGAACTGCAGCCTTGGCAGTGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR GCA 90 bp GGGGTTGGCCCCAGATGGAATATCTTCCACACCCGCCCGCTTCTGCCAAACCCCTGGGGGAGGTCCCTCTaGTCAGTGCCCAGGTGGCAG +
Preference number: 2 (lower is better)
Translates to: GVGPRWNIFHTRPLLPNPWGRSL*SVPRWQ
Trigger: CTGCCACCTGGGCACTGAGCAGAGGGACCTCCCCCA...GGGGTTTGGCAGAAGCGGGCGGGTGTGGAAGATATTCCATCTGGGGCCAACCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR GCA 90 bp GTGGGCTTCTTCAGAAGGCAGGGTGACAGTGGGCGCTGCACCCTAGGCAGCAGTTGGGGGAGGTCCCTCTaGTCAGTGCCCAGGTGGCAG +
Preference number: 2 (lower is better)
Translates to: VGFFRRQGDSGRCTLGSSWGRSL*SVPRWQ
Trigger: CTGCCACCTGGGCACTGAGCAGAGGGACCTCCCCCA...ACTGCTGCCTAGGGTGCAGCGCCCACTGTCACCCTGCCTTCTGAAGAAGCCCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR GCA 90 bp GCTGTGGCTGATGTTGACGGGGCCACACCAGGGAGAGGGTGGGCACCCTCGGTGCAGCTGTCCAGTCACTaGCAAGGCTGCAGTTCCAGG +
Preference number: 2 (lower is better)
Translates to: AVADVDGATPGRGWAPSVQLSSH*QGCSSR
Trigger: CCTGGAACTGCAGCCTTGGCAGTGACTGGACAGCTG...CACCGAGGGTGCCCACCCTCTCCCTGGTGTGGCCCCGTCAACATCAGCCACAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR GCA 90 bp AAGCTCAGCGCAGGCCCAGCCTGGGGTTGGCCCCAGATGGAATATCTTCCACACGGTGGGCACCCTCGGTaGCAGGGAGAGCCTGCTCTC +
Preference number: 2 (lower is better)
Translates to: KLSAGPAWGWPQMEYLPHGGHPR*QGEPAL
Trigger: GAGAGCAGGCTCTCCCTGGCACCGAGGGTGCCCACC...GTGTGGAAGATATTCCATCTGGGGCCAACCCCAGGCTGGGCCTGCGCTGAGCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR GCA 90 bp GGGTTGGCCCCAGATGGAATATCTTCCACACCCGCCCGCTTCTGCCAAACCCCAGCCCGACCAGGCACCTaGCCGATGGCTGAGAGCCAG +
Preference number: 2 (lower is better)
Translates to: GLAPDGISSTPARFCQTPARPGT*PMAESQ
Trigger: CTGGCTCTCAGCCATCGGGCAGGTGCCTGGTCGGGC...TGGGGTTTGGCAGAAGCGGGCGGGTGTGGAAGATATTCCATCTGGGGCCAACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR GCA 90 bp AAGCTCAGCGCAGGCCCAGCCTGGGGTTGGCCCCAGATGGAATATCTTCCACACGCCCGACCAGGCACCTaGCCGATGGCTGAGAGCCAG +
Preference number: 2 (lower is better)
Translates to: KLSAGPAWGWPQMEYLPHARPGT*PMAESQ
Trigger: CTGGCTCTCAGCCATCGGGCAGGTGCCTGGTCGGGC...GTGTGGAAGATATTCCATCTGGGGCCAACCCCAGGCTGGGCCTGCGCTGAGCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR CCA 90 bp GCCACTCCCAGCCTCAGACGCAGATGGGCCCGAGAGGTGTTCCTGGGAAACAGTTGCTCAGTGCCCAGGTaGCAGGGTCCCACTTGCCCC +
Preference number: 2 (lower is better)
Translates to: ATPSLRRRWAREVFLGNSCSVPR*QGPTCP
Trigger: GGGGCAAGTGGGACCCTGCCACCTGGGCACTGAGCA...ACTGTTTCCCAGGAACACCTCTCGGGCCCATCTGCGTCTGAGGCTGGGAGTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR CCA 90 bp GTCACTGCCAAGGCTGCAGTTCCAGGTACCGGGGTGCACCTTAGGAGCCCTGTGTGCTCAGTGCCCAGGTaGCAGGGTCCCACTTGCCCC +
Preference number: 2 (lower is better)
Translates to: VTAKAAVPGTGVHLRSPVCSVPR*QGPTCP
Trigger: GGGGCAAGTGGGACCCTGCCACCTGGGCACTGAGCA...CACAGGGCTCCTAAGGTGCACCCCGGTACCTGGAACTGCAGCCTTGGCAGTGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR CCA 90 bp GCCACTCCCAGCCTCAGACGCAGATGGGCCCGAGAGGTGTTCCTGGGAAACAGTCACCCTAGGCAGCAGTaGGAGGTTGCTGGCAGCGGC +
Preference number: 2 (lower is better)
Translates to: ATPSLRRRWAREVFLGNSHPRQQ*EVAGSG
Trigger: GCCGCTGCCAGCAACCTCCCACTGCTGCCTAGGGTG...ACTGTTTCCCAGGAACACCTCTCGGGCCCATCTGCGTCTGAGGCTGGGAGTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR CCA 90 bp AAGCTCAGCGCAGGCCCAGCCTGGGGTTGGCCCCAGATGGAATATCTTCCACACTGGCTCCGGACAGCCTaGCACCCAGGGCAGTGGGGA +
Preference number: 2 (lower is better)
Translates to: KLSAGPAWGWPQMEYLPHWLRTA*HPGQWG
Trigger: TCCCCACTGCCCTGGGTGCCAGGCTGTCCGGAGCCA...GTGTGGAAGATATTCCATCTGGGGCCAACCCCAGGCTGGGCCTGCGCTGAGCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR TCA 90 bp CTGCCAAGGCTGCAGTTCCAGGTACCGGGGTGCACCTTAGGAGCCCTGTGGGCTGCCCTGTCTGTGGTGTaGGATCTGCAGACCCACCCA +
Preference number: 2 (lower is better)
Translates to: LPRLQFQVPGCTLGALWAALSVV*DLQTHP
Trigger: TGGGTGGGTCTGCAGATCTCACACCACAGACAGGGC...AGCCCACAGGGCTCCTAAGGTGCACCCCGGTACCTGGAACTGCAGCCTTGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR TCA 90 bp GGGGTTGGCCCCAGATGGAATATCTTCCACACCCGCCCGCTTCTGCCAAACCCCCTTCAGAAGGCAGGGTaGCAGTGGGCGCTGCACCCT +
Preference number: 2 (lower is better)
Translates to: GVGPRWNIFHTRPLLPNPLQKAG*QWALHP
Trigger: AGGGTGCAGCGCCCACTGTCACCCTGCCTTCTGAAG...GGGGTTTGGCAGAAGCGGGCGGGTGTGGAAGATATTCCATCTGGGGCCAACCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR TCA 90 bp GCCACTCCCAGCCTCAGACGCAGATGGGCCCGAGAGGTGTTCCTGGGAAACAGTCTTCAGAAGGCAGGGTaGCAGTGGGCGCTGCACCCT +
Preference number: 2 (lower is better)
Translates to: ATPSLRRRWAREVFLGNSLQKAG*QWALHP
Trigger: AGGGTGCAGCGCCCACTGTCACCCTGCCTTCTGAAG...ACTGTTTCCCAGGAACACCTCTCGGGCCCATCTGCGTCTGAGGCTGGGAGTGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR TCA 90 bp GAAGCTCAGCGCAGGCCCAGCCTGGGGTTGGCCCCAGATGGAATATCTTCCACAGCCAGCAGGAGCACCTaGGTGGGGCTGAGGTCAGAC +
Preference number: 2 (lower is better)
Translates to: EAQRRPSLGLAPDGISSTASRST*VGLRSD
Trigger: GTCTGACCTCAGCCCCACTCAGGTGCTCCTGCTGGC...TGTGGAAGATATTCCATCTGGGGCCAACCCCAGGCTGGGCCTGCGCTGAGCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR TCA 90 bp AAGCTCAGCGCAGGCCCAGCCTGGGGTTGGCCCCAGATGGAATATCTTCCACACCACCTGCCCGATGGCTaGGAGCCAGCCTCACGGTCA +
Preference number: 2 (lower is better)
Translates to: KLSAGPAWGWPQMEYLPHHLPDG*EPASRS
Trigger: TGACCGTGAGGCTGGCTCTCAGCCATCGGGCAGGTG...GTGTGGAAGATATTCCATCTGGGGCCAACCCCAGGCTGGGCCTGCGCTGAGCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR GCA 90 bp GTCACTGCCAAGGCTGCAGTTCCAGGTACCGGGGTGCACCTTAGGAGCCCTGTGCCCCTCTCCAGGCTGTaGCTCAGCGTGGACAGTCCA +
Preference number: 2 (lower is better)
Translates to: VTAKAAVPGTGVHLRSPVPLSRL*LSVDSP
Trigger: TGGACTGTCCACGCTGAGGCACAGCCTGGAGAGGGG...CACAGGGCTCCTAAGGTGCACCCCGGTACCTGGAACTGCAGCCTTGGCAGTGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR GCA 90 bp CCACCCAGCTGTCCAGTCACTGCCAAGGCTGCAGTTCCAGGTACCGGGGTGCACAGGTGTAGGGACACGTaGAAAGGCCCCTCTCCAGGC +
Preference number: 2 (lower is better)
Translates to: PPSCPVTAKAAVPGTGVHRCRDT*KGPSPG
Trigger: GCCTGGAGAGGGGCCTTTGCACGTGTCCCTACACCT...GTGCACCCCGGTACCTGGAACTGCAGCCTTGGCAGTGACTGGACAGCTGGGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR GCA 90 bp GGGTTGGCCCCAGATGGAATATCTTCCACACCCGCCCGCTTCTGCCAAACCCCAGGTCCCTCTGCTCAGTaGCCAGGTGGCAGGGTCCCA +
Preference number: 2 (lower is better)
Translates to: GLAPDGISSTPARFCQTPGPSAQ*PGGRVP
Trigger: TGGGACCCTGCCACCTGGGCACTGAGCAGAGGGACC...TGGGGTTTGGCAGAAGCGGGCGGGTGTGGAAGATATTCCATCTGGGGCCAACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR GCA 90 bp GTACCGGGGTGCACCTTAGGAGCCCTGTGGGCTTCTTCAGAAGGCAGGGTGACAGCAGCAGTGGGAGGTTaGTGGCAGCGGCAGGCTGTC +
Preference number: 2 (lower is better)
Translates to: VPGCTLGALWASSEGRVTAAVGG*WQRQAV
Trigger: GACAGCCTGCCGCTGCCAGCAACCTCCCACTGCTGC...TGTCACCCTGCCTTCTGAAGAAGCCCACAGGGCTCCTAAGGTGCACCCCGGTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR GCA 90 bp GCCTGGGGTTGGCCCCAGATGGAATATCTTCCACACCCGCCCGCTTCTGCCAAAGGTGACAGTGGGCGCTaGACCCTAGGCAGCAGTGGG +
Preference number: 2 (lower is better)
Translates to: AWGWPQMEYLPHPPASAKGDSGR*TLGSSG
Trigger: CCCACTGCTGCCTAGGGTGCAGCGCCCACTGTCACC...TTTGGCAGAAGCGGGCGGGTGTGGAAGATATTCCATCTGGGGCCAACCCCAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR CCA 90 bp AAGCTCAGCGCAGGCCCAGCCTGGGGTTGGCCCCAGATGGAATATCTTCCACACGCAGTGGGAGGTTGCTaGCAGCGGCAGGCTGTCCCA +
Preference number: 2 (lower is better)
Translates to: KLSAGPAWGWPQMEYLPHAVGGC*QRQAVP
Trigger: TGGGACAGCCTGCCGCTGCCAGCAACCTCCCACTGC...GTGTGGAAGATATTCCATCTGGGGCCAACCCCAGGCTGGGCCTGCGCTGAGCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR CCA 90 bp GAAGCTCAGCGCAGGCCCAGCCTGGGGTTGGCCCCAGATGGAATATCTTCCACAGCAGTGGGAGGTTGCTaGCAGCGGCAGGCTGTCCCA +
Preference number: 2 (lower is better)
Translates to: EAQRRPSLGLAPDGISSTAVGGC*QRQAVP
Trigger: TGGGACAGCCTGCCGCTGCCAGCAACCTCCCACTGC...TGTGGAAGATATTCCATCTGGGGCCAACCCCAGGCTGGGCCTGCGCTGAGCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR CCA 90 bp CAGCAGGAGCACCTGAGTGGGGCTGAGGTCAGACCCACTAACCCACTAATGGGGCACCCTAGGCAGCAGTaGGAGGTTGCTGGCAGCGGC +
Preference number: 2 (lower is better)
Translates to: QQEHLSGAEVRPTNPLMGHPRQQ*EVAGSG
Trigger: GCCGCTGCCAGCAACCTCCCACTGCTGCCTAGGGTG...CCCCATTAGTGGGTTAGTGGGTCTGACCTCAGCCCCACTCAGGTGCTCCTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR CCA 90 bp GCCACTCCCAGCCTCAGACGCAGATGGGCCCGAGAGGTGTTCCTGGGAAACAGTCGAGGGGCCTTGAGGTaGCCTGTCCAAGGTTCCCAG +
Preference number: 2 (lower is better)
Translates to: ATPSLRRRWAREVFLGNSRGALR*PVQGSQ
Trigger: CTGGGAACCTTGGACAGGCCACCTCAAGGCCCCTCG...ACTGTTTCCCAGGAACACCTCTCGGGCCCATCTGCGTCTGAGGCTGGGAGTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR CCA 90 bp GAAGCTCAGCGCAGGCCCAGCCTGGGGTTGGCCCCAGATGGAATATCTTCCACATGGCACCCAGGGCAGTaGGGACAGCTCTGTGTGGGG +
Preference number: 2 (lower is better)
Translates to: EAQRRPSLGLAPDGISSTWHPGQ*GQLCVG
Trigger: CCCCACACAGAGCTGTCCCCACTGCCCTGGGTGCCA...TGTGGAAGATATTCCATCTGGGGCCAACCCCAGGCTGGGCCTGCGCTGAGCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR CCA 90 bp AAGCTCAGCGCAGGCCCAGCCTGGGGTTGGCCCCAGATGGAATATCTTCCACACTGGCACCCAGGGCAGTaGGGACAGCTCTGTGTGGGG +
Preference number: 2 (lower is better)
Translates to: KLSAGPAWGWPQMEYLPHWHPGQ*GQLCVG
Trigger: CCCCACACAGAGCTGTCCCCACTGCCCTGGGTGCCA...GTGTGGAAGATATTCCATCTGGGGCCAACCCCAGGCTGGGCCTGCGCTGAGCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR CCA 90 bp AAGCTCAGCGCAGGCCCAGCCTGGGGTTGGCCCCAGATGGAATATCTTCCACACCAGGCACCTGCCCGATaGCTGAGAGCCAGCCTCACG +
Preference number: 2 (lower is better)
Translates to: KLSAGPAWGWPQMEYLPHQAPAR*LRASLT
Trigger: CGTGAGGCTGGCTCTCAGCCATCGGGCAGGTGCCTG...GTGTGGAAGATATTCCATCTGGGGCCAACCCCAGGCTGGGCCTGCGCTGAGCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR TCA 90 bp GTGACTGTGGCCTCTGCCCAGTTCTTAAAAGGCAGAAGCTCCCTGAGGGCAGGGGCAGCCGAGGGGCCTTaGGGTGGCCTGTCCAAGGTT +
Preference number: 2 (lower is better)
Translates to: VTVASAQFLKGRSSLRAGAAEGP*GGLSKV
Trigger: AACCTTGGACAGGCCACCTCAAGGCCCCTCGGCTGC...CCCTGCCCTCAGGGAGCTTCTGCCTTTTAAGAACTGGGCAGAGGCCACAGTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR GCA 90 bp GTACCGGGGTGCACCTTAGGAGCCCTGTGGGCTTCTTCAGAAGGCAGGGTGACACCCCTCTCCAGGCTGTaGCTCAGCGTGGACAGTCCA +
Preference number: 2 (lower is better)
Translates to: VPGCTLGALWASSEGRVTPLSRL*LSVDSP
Trigger: TGGACTGTCCACGCTGAGGCACAGCCTGGAGAGGGG...TGTCACCCTGCCTTCTGAAGAAGCCCACAGGGCTCCTAAGGTGCACCCCGGTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR GCA 90 bp AGGCAGCCCTGTCTGTGGTGTGAGATCTGCAGACCCACCCAGCAGAGGAGTAGGCCCCTCTCCAGGCTGTaGCTCAGCGTGGACAGTCCA +
Preference number: 2 (lower is better)
Translates to: RQPCLWCEICRPTQQRSRPLSRL*LSVDSP
Trigger: TGGACTGTCCACGCTGAGGCACAGCCTGGAGAGGGG...CCTACTCCTCTGCTGGGTGGGTCTGCAGATCTCACACCACAGACAGGGCTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR GCA 90 bp GTGGGCTTCTTCAGAAGGCAGGGTGACAGTGGGCGCTGCACCCTAGGCAGCAGTAGGTGTAGGGACACGTaGAAAGGCCCCTCTCCAGGC +
Preference number: 2 (lower is better)
Translates to: VGFFRRQGDSGRCTLGSSRCRDT*KGPSPG
Trigger: GCCTGGAGAGGGGCCTTTGCACGTGTCCCTACACCT...ACTGCTGCCTAGGGTGCAGCGCCCACTGTCACCCTGCCTTCTGAAGAAGCCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR GCA 90 bp CCACCCAGCTGTCCAGTCACTGCCAAGGCTGCAGTTCCAGGTACCGGGGTGCACCTGTGGTGTGAGATCTaGAGACCCACCCAGCAGAGG +
Preference number: 2 (lower is better)
Translates to: PPSCPVTAKAAVPGTGVHLWCEI*RPTQQR
Trigger: CCTCTGCTGGGTGGGTCTGCAGATCTCACACCACAG...GTGCACCCCGGTACCTGGAACTGCAGCCTTGGCAGTGACTGGACAGCTGGGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR GCA 90 bp GGCCCAGCCTGGGGTTGGCCCCAGATGGAATATCTTCCACACCCGCCCGCTTCTCTGTGGTGTGAGATCTaGAGACCCACCCAGCAGAGG +
Preference number: 2 (lower is better)
Translates to: GPAWGWPQMEYLPHPPASLWCEI*RPTQQR
Trigger: CCTCTGCTGGGTGGGTCTGCAGATCTCACACCACAG...AGAAGCGGGCGGGTGTGGAAGATATTCCATCTGGGGCCAACCCCAGGCTGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR GCA 90 bp GGCCCAGCCTGGGGTTGGCCCCAGATGGAATATCTTCCACACCCGCCCGCTTCTATCTCCAGGGGAAGCTaGTCCCAGGTCACAGCAGGT +
Preference number: 2 (lower is better)
Translates to: GPAWGWPQMEYLPHPPASISRGS*SQVTAG
Trigger: ACCTGCTGTGACCTGGGAGCAGCTTCCCCTGGAGAT...AGAAGCGGGCGGGTGTGGAAGATATTCCATCTGGGGCCAACCCCAGGCTGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR GCA 90 bp CCACCCAGCTGTCCAGTCACTGCCAAGGCTGCAGTTCCAGGTACCGGGGTGCACATCTCCAGGGGAAGCTaGTCCCAGGTCACAGCAGGT +
Preference number: 2 (lower is better)
Translates to: PPSCPVTAKAAVPGTGVHISRGS*SQVTAG
Trigger: ACCTGCTGTGACCTGGGAGCAGCTTCCCCTGGAGAT...GTGCACCCCGGTACCTGGAACTGCAGCCTTGGCAGTGACTGGACAGCTGGGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR GCA 90 bp GTGACTGTGGCCTCTGCCCAGTTCTTAAAAGGCAGAAGCTCCCTGAGGGCAGGGTGGGGGAGGTCCCTCTaGTCAGTGCCCAGGTGGCAG +
Preference number: 2 (lower is better)
Translates to: VTVASAQFLKGRSSLRAGWGRSL*SVPRWQ
Trigger: CTGCCACCTGGGCACTGAGCAGAGGGACCTCCCCCA...CCCTGCCCTCAGGGAGCTTCTGCCTTTTAAGAACTGGGCAGAGGCCACAGTCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR GCA 90 bp GGGGTTGGCCCCAGATGGAATATCTTCCACACCCGCCCGCTTCTGCCAAACCCCTTCCAGGTACCGGGGTaGACCTTAGGAGCCCTGTGG +
Preference number: 2 (lower is better)
Translates to: GVGPRWNIFHTRPLLPNPFQVPG*TLGALW
Trigger: CCACAGGGCTCCTAAGGTGCACCCCGGTACCTGGAA...GGGGTTTGGCAGAAGCGGGCGGGTGTGGAAGATATTCCATCTGGGGCCAACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR GCA 90 bp GAGGTGACTGTGGCCTCTGCCCAGTTCTTAAAAGGCAGAAGCTCCCTGAGGGCAGGTGGGCACCCTCGGTaGCAGGGAGAGCCTGCTCTC +
Preference number: 2 (lower is better)
Translates to: EVTVASAQFLKGRSSLRAGGHPR*QGEPAL
Trigger: GAGAGCAGGCTCTCCCTGGCACCGAGGGTGCCCACC...TGCCCTCAGGGAGCTTCTGCCTTTTAAGAACTGGGCAGAGGCCACAGTCACCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR GCA 90 bp GCCACTCCCAGCCTCAGACGCAGATGGGCCCGAGAGGTGTTCCTGGGAAACAGTGCAAGACCCAGTACCTaGGCTCCAGAAGCTCAGCGC +
Preference number: 2 (lower is better)
Translates to: ATPSLRRRWAREVFLGNSARPST*APEAQR
Trigger: GCGCTGAGCTTCTGGAGCGCAGGTACTGGGTCTTGC...ACTGTTTCCCAGGAACACCTCTCGGGCCCATCTGCGTCTGAGGCTGGGAGTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR CCA 90 bp GTGGGCTTCTTCAGAAGGCAGGGTGACAGTGGGCGCTGCACCCTAGGCAGCAGTGGCTGTGCCTCAGCGTaGACAGTCCAGGCCTCACTT +
Preference number: 2 (lower is better)
Translates to: VGFFRRQGDSGRCTLGSSGCASA*TVQASL
Trigger: AAGTGAGGCCTGGACTGTCCACGCTGAGGCACAGCC...ACTGCTGCCTAGGGTGCAGCGCCCACTGTCACCCTGCCTTCTGAAGAAGCCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000625979.2
ENST00000629431.2
3UTR-3UTR CCA 90 bp GTGACTGTGGCCTCTGCCCAGTTCTTAAAAGGCAGAAGCTCCCTGAGGGCAGGGCACCCTAGGCAGCAGTaGGAGGTTGCTGGCAGCGGC +
Preference number: 2 (lower is better)
Translates to: VTVASAQFLKGRSSLRAGHPRQQ*EVAGSG
Trigger: GCCGCTGCCAGCAACCTCCCACTGCTGCCTAGGGTG...CCCTGCCCTCAGGGAGCTTCTGCCTTTTAAGAACTGGGCAGAGGCCACAGTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR CCA 90 bp GCCACTCCCAGCCTCAGACGCAGATGGGCCCGAGAGGTGTTCCTGGGAAACAGTAATGGGGCTGGGCTGTaGCTGATGTTGACGGGGCCA +
Preference number: 2 (lower is better)
Translates to: ATPSLRRRWAREVFLGNSNGAGL*LMLTGP
Trigger: TGGCCCCGTCAACATCAGCCACAGCCCAGCCCCATT...ACTGTTTCCCAGGAACACCTCTCGGGCCCATCTGCGTCTGAGGCTGGGAGTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR CCA 90 bp CGCAGATGGGCCCGAGAGGTGTTCCTGGGAAACAGTTCACTTAGCAAGACCCAGTGGCTCCGGACAGCCTaGCACCCAGGGCAGTGGGGA +
Preference number: 2 (lower is better)
Translates to: RRWAREVFLGNSSLSKTQWLRTA*HPGQWG
Trigger: TCCCCACTGCCCTGGGTGCCAGGCTGTCCGGAGCCA...CTGGGTCTTGCTAAGTGAACTGTTTCCCAGGAACACCTCTCGGGCCCATCTGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR TCA 90 bp GGGTTGGCCCCAGATGGAATATCTTCCACACCCGCCCGCTTCTGCCAAACCCCAGCCCTGTCTGTGGTGTaGGATCTGCAGACCCACCCA +
Preference number: 2 (lower is better)
Translates to: GLAPDGISSTPARFCQTPALSVV*DLQTHP
Trigger: TGGGTGGGTCTGCAGATCTCACACCACAGACAGGGC...TGGGGTTTGGCAGAAGCGGGCGGGTGTGGAAGATATTCCATCTGGGGCCAACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR TCA 90 bp CGCAGATGGGCCCGAGAGGTGTTCCTGGGAAACAGTTCACTTAGCAAGACCCAGGCCAGCAGGAGCACCTaGGTGGGGCTGAGGTCAGAC +
Preference number: 2 (lower is better)
Translates to: RRWAREVFLGNSSLSKTQASRST*VGLRSD
Trigger: GTCTGACCTCAGCCCCACTCAGGTGCTCCTGCTGGC...CTGGGTCTTGCTAAGTGAACTGTTTCCCAGGAACACCTCTCGGGCCCATCTGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR GCA 90 bp GCAGTTCCAGGTACCGGGGTGCACCTTAGGAGCCCTGTGGGCTTCTTCAGAAGGAGGTGTAGGGACACGTaGAAAGGCCCCTCTCCAGGC +
Preference number: 2 (lower is better)
Translates to: AVPGTGVHLRSPVGFFRRRCRDT*KGPSPG
Trigger: GCCTGGAGAGGGGCCTTTGCACGTGTCCCTACACCT...CCTTCTGAAGAAGCCCACAGGGCTCCTAAGGTGCACCCCGGTACCTGGAACTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR GCA 90 bp CAGCAGGAGCACCTGAGTGGGGCTGAGGTCAGACCCACTAACCCACTAATGGGGAGGTGTAGGGACACGTaGAAAGGCCCCTCTCCAGGC +
Preference number: 2 (lower is better)
Translates to: QQEHLSGAEVRPTNPLMGRCRDT*KGPSPG
Trigger: GCCTGGAGAGGGGCCTTTGCACGTGTCCCTACACCT...CCCCATTAGTGGGTTAGTGGGTCTGACCTCAGCCCCACTCAGGTGCTCCTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR GCA 90 bp GCCTGGGGTTGGCCCCAGATGGAATATCTTCCACACCCGCCCGCTTCTGCCAAAAGCTGCTGCAGGCTCTaGCTCAAGTCCAGCAGCCCA +
Preference number: 2 (lower is better)
Translates to: AWGWPQMEYLPHPPASAKSCCRL*LKSSSP
Trigger: TGGGCTGCTGGACTTGAGGCAGAGCCTGCAGCAGCT...TTTGGCAGAAGCGGGCGGGTGTGGAAGATATTCCATCTGGGGCCAACCCCAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR GCA 90 bp GTGGGCTTCTTCAGAAGGCAGGGTGACAGTGGGCGCTGCACCCTAGGCAGCAGTCTGTGGTGTGAGATCTaGAGACCCACCCAGCAGAGG +
Preference number: 2 (lower is better)
Translates to: VGFFRRQGDSGRCTLGSSLWCEI*RPTQQR
Trigger: CCTCTGCTGGGTGGGTCTGCAGATCTCACACCACAG...ACTGCTGCCTAGGGTGCAGCGCCCACTGTCACCCTGCCTTCTGAAGAAGCCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR GCA 90 bp GCCACTCCCAGCCTCAGACGCAGATGGGCCCGAGAGGTGTTCCTGGGAAACAGTCTGTGGTGTGAGATCTaGAGACCCACCCAGCAGAGG +
Preference number: 2 (lower is better)
Translates to: ATPSLRRRWAREVFLGNSLWCEI*RPTQQR
Trigger: CCTCTGCTGGGTGGGTCTGCAGATCTCACACCACAG...ACTGTTTCCCAGGAACACCTCTCGGGCCCATCTGCGTCTGAGGCTGGGAGTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR GCA 90 bp CGCAGATGGGCCCGAGAGGTGTTCCTGGGAAACAGTTCACTTAGCAAGACCCAGGGTGACAGTGGGCGCTaGACCCTAGGCAGCAGTGGG +
Preference number: 2 (lower is better)
Translates to: RRWAREVFLGNSSLSKTQGDSGR*TLGSSG
Trigger: CCCACTGCTGCCTAGGGTGCAGCGCCCACTGTCACC...CTGGGTCTTGCTAAGTGAACTGTTTCCCAGGAACACCTCTCGGGCCCATCTGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR GCA 90 bp AAGCTCAGCGCAGGCCCAGCCTGGGGTTGGCCCCAGATGGAATATCTTCCACACTTCCAGGTACCGGGGTaGACCTTAGGAGCCCTGTGG +
Preference number: 2 (lower is better)
Translates to: KLSAGPAWGWPQMEYLPHFQVPG*TLGALW
Trigger: CCACAGGGCTCCTAAGGTGCACCCCGGTACCTGGAA...GTGTGGAAGATATTCCATCTGGGGCCAACCCCAGGCTGGGCCTGCGCTGAGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR GCA 90 bp GGGTTGGCCCCAGATGGAATATCTTCCACACCCGCCCGCTTCTGCCAAACCCCATTCCAGGTACCGGGGTaGACCTTAGGAGCCCTGTGG +
Preference number: 2 (lower is better)
Translates to: GLAPDGISSTPARFCQTPFQVPG*TLGALW
Trigger: CCACAGGGCTCCTAAGGTGCACCCCGGTACCTGGAA...TGGGGTTTGGCAGAAGCGGGCGGGTGTGGAAGATATTCCATCTGGGGCCAACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR GCA 90 bp GCCTGGGGTTGGCCCCAGATGGAATATCTTCCACACCCGCCCGCTTCTGCCAAATTCCAGGTACCGGGGTaGACCTTAGGAGCCCTGTGG +
Preference number: 2 (lower is better)
Translates to: AWGWPQMEYLPHPPASAKFQVPG*TLGALW
Trigger: CCACAGGGCTCCTAAGGTGCACCCCGGTACCTGGAA...TTTGGCAGAAGCGGGCGGGTGTGGAAGATATTCCATCTGGGGCCAACCCCAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR GCA 90 bp GCCACTCCCAGCCTCAGACGCAGATGGGCCCGAGAGGTGTTCCTGGGAAACAGTAGTCACTGCCAAGGCTaGAGTTCCAGGTACCGGGGT +
Preference number: 2 (lower is better)
Translates to: ATPSLRRRWAREVFLGNSSHCQG*SSRYRG
Trigger: ACCCCGGTACCTGGAACTGCAGCCTTGGCAGTGACT...ACTGTTTCCCAGGAACACCTCTCGGGCCCATCTGCGTCTGAGGCTGGGAGTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR GCA 90 bp GGGGTTGGCCCCAGATGGAATATCTTCCACACCCGCCCGCTTCTGCCAAACCCCAGTCACTGCCAAGGCTaGAGTTCCAGGTACCGGGGT +
Preference number: 2 (lower is better)
Translates to: GVGPRWNIFHTRPLLPNPSHCQG*SSRYRG
Trigger: ACCCCGGTACCTGGAACTGCAGCCTTGGCAGTGACT...GGGGTTTGGCAGAAGCGGGCGGGTGTGGAAGATATTCCATCTGGGGCCAACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR GCA 90 bp GAAGCTCAGCGCAGGCCCAGCCTGGGGTTGGCCCCAGATGGAATATCTTCCACAGTGCCAGGGAGAGCCTaGTCTCCCCACTTCCTTAGC +
Preference number: 2 (lower is better)
Translates to: EAQRRPSLGLAPDGISSTVPGRA*SPHFLS
Trigger: GCTAAGGAAGTGGGGAGAGCAGGCTCTCCCTGGCAC...TGTGGAAGATATTCCATCTGGGGCCAACCCCAGGCTGGGCCTGCGCTGAGCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR GCA 90 bp GCCTGGGGTTGGCCCCAGATGGAATATCTTCCACACCCGCCCGCTTCTGCCAAAGTGCCAGGGAGAGCCTaGTCTCCCCACTTCCTTAGC +
Preference number: 2 (lower is better)
Translates to: AWGWPQMEYLPHPPASAKVPGRA*SPHFLS
Trigger: GCTAAGGAAGTGGGGAGAGCAGGCTCTCCCTGGCAC...TTTGGCAGAAGCGGGCGGGTGTGGAAGATATTCCATCTGGGGCCAACCCCAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR GCA 90 bp AAGCTCAGCGCAGGCCCAGCCTGGGGTTGGCCCCAGATGGAATATCTTCCACACGTGCCAGGGAGAGCCTaGTCTCCCCACTTCCTTAGC +
Preference number: 2 (lower is better)
Translates to: KLSAGPAWGWPQMEYLPHVPGRA*SPHFLS
Trigger: GCTAAGGAAGTGGGGAGAGCAGGCTCTCCCTGGCAC...GTGTGGAAGATATTCCATCTGGGGCCAACCCCAGGCTGGGCCTGCGCTGAGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR GCA 90 bp CCCGAGAGGTGTTCCTGGGAAACAGTTCACTTAGCAAGACCCAGTACCTGCGCTGGTGGGCACCCTCGGTaGCAGGGAGAGCCTGCTCTC +
Preference number: 2 (lower is better)
Translates to: PERCSWETVHLARPSTCAGGHPR*QGEPAL
Trigger: GAGAGCAGGCTCTCCCTGGCACCGAGGGTGCCCACC...AGCGCAGGTACTGGGTCTTGCTAAGTGAACTGTTTCCCAGGAACACCTCTCGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR CCA 90 bp GAAGCTCAGCGCAGGCCCAGCCTGGGGTTGGCCCCAGATGGAATATCTTCCACAGGCTGTGCCTCAGCGTaGACAGTCCAGGCCTCACTT +
Preference number: 2 (lower is better)
Translates to: EAQRRPSLGLAPDGISSTGCASA*TVQASL
Trigger: AAGTGAGGCCTGGACTGTCCACGCTGAGGCACAGCC...TGTGGAAGATATTCCATCTGGGGCCAACCCCAGGCTGGGCCTGCGCTGAGCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000625979.2
ENST00000629431.2
3UTR-3UTR CCA 90 bp CGCAGATGGGCCCGAGAGGTGTTCCTGGGAAACAGTTCACTTAGCAAGACCCAGTGCTCAGTGCCCAGGTaGCAGGGTCCCACTTGCCCC +
Preference number: 2 (lower is better)
Translates to: RRWAREVFLGNSSLSKTQCSVPR*QGPTCP
Trigger: GGGGCAAGTGGGACCCTGCCACCTGGGCACTGAGCA...CTGGGTCTTGCTAAGTGAACTGTTTCCCAGGAACACCTCTCGGGCCCATCTGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR CCA 90 bp GCCTGGGGTTGGCCCCAGATGGAATATCTTCCACACCCGCCCGCTTCTGCCAAATGGGGGTGCACATCCTaGGCACCAGCTCTCTGCATC +
Preference number: 2 (lower is better)
Translates to: AWGWPQMEYLPHPPASAKWGCTS*APALCI
Trigger: GATGCAGAGAGCTGGTGCCCAGGATGTGCACCCCCA...TTTGGCAGAAGCGGGCGGGTGTGGAAGATATTCCATCTGGGGCCAACCCCAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR CCA 90 bp GCCACTCCCAGCCTCAGACGCAGATGGGCCCGAGAGGTGTTCCTGGGAAACAGTGGCCCAGCCTGGGGTTaGCCCCAGATGGAATATCTT +
Preference number: 2 (lower is better)
Translates to: ATPSLRRRWAREVFLGNSGPAWG*PQMEYL
Trigger: AAGATATTCCATCTGGGGCCAACCCCAGGCTGGGCC...ACTGTTTCCCAGGAACACCTCTCGGGCCCATCTGCGTCTGAGGCTGGGAGTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR TCA 90 bp AGGCACGCGAGCCACGGCCACGCTTTATTGCTTAAGACGCACACAGAACACAGAGCAGCCGAGGGGCCTTaGGGTGGCCTGTCCAAGGTT +
Preference number: 2 (lower is better)
Translates to: RHASHGHALLLKTHTEHRAAEGP*GGLSKV
Trigger: AACCTTGGACAGGCCACCTCAAGGCCCCTCGGCTGC...TCTGTGTTCTGTGTGCGTCTTAAGCAATAAAGCGTGGCCGTGGCTCGCGTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR TCA 90 bp AGGCACGCGAGCCACGGCCACGCTTTATTGCTTAAGACGCACACAGAACACAGAAAGGCAGAAGCTCCCTaGGGGCAGGGCTTGGGCAGG +
Preference number: 2 (lower is better)
Translates to: RHASHGHALLLKTHTEHRKAEAP*GQGLGR
Trigger: CCTGCCCAAGCCCTGCCCTCAGGGAGCTTCTGCCTT...TCTGTGTTCTGTGTGCGTCTTAAGCAATAAAGCGTGGCCGTGGCTCGCGTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR TCA 90 bp CGCAGATGGGCCCGAGAGGTGTTCCTGGGAAACAGTTCACTTAGCAAGACCCAGCTCTGTGTGGGGAGGTaGCTGTGGCCTCTGCCCAGT +
Preference number: 2 (lower is better)
Translates to: RRWAREVFLGNSSLSKTQLCVGR*LWPLPS
Trigger: ACTGGGCAGAGGCCACAGTCACCTCCCCACACAGAG...CTGGGTCTTGCTAAGTGAACTGTTTCCCAGGAACACCTCTCGGGCCCATCTGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR TCA 90 bp AGGCACGCGAGCCACGGCCACGCTTTATTGCTTAAGACGCACACAGAACACAGACACCTGCCCGATGGCTaGGAGCCAGCCTCACGGTCA +
Preference number: 2 (lower is better)
Translates to: RHASHGHALLLKTHTEHRHLPDG*EPASRS
Trigger: TGACCGTGAGGCTGGCTCTCAGCCATCGGGCAGGTG...TCTGTGTTCTGTGTGCGTCTTAAGCAATAAAGCGTGGCCGTGGCTCGCGTGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR GCA 90 bp GCAGTTCCAGGTACCGGGGTGCACCTTAGGAGCCCTGTGGGCTTCTTCAGAAGGTGTCCACACAGCTGCTaGAGGCTCTGCCTCAAGTCC +
Preference number: 2 (lower is better)
Translates to: AVPGTGVHLRSPVGFFRRCPHSC*RLCLKS
Trigger: GGACTTGAGGCAGAGCCTGCAGCAGCTGTGTGGACA...CCTTCTGAAGAAGCCCACAGGGCTCCTAAGGTGCACCCCGGTACCTGGAACTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR GCA 90 bp GTACCGGGGTGCACCTTAGGAGCCCTGTGGGCTTCTTCAGAAGGCAGGGTGACATGTCCACACAGCTGCTaGAGGCTCTGCCTCAAGTCC +
Preference number: 2 (lower is better)
Translates to: VPGCTLGALWASSEGRVTCPHSC*RLCLKS
Trigger: GGACTTGAGGCAGAGCCTGCAGCAGCTGTGTGGACA...TGTCACCCTGCCTTCTGAAGAAGCCCACAGGGCTCCTAAGGTGCACCCCGGTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR GCA 90 bp AAGCTCAGCGCAGGCCCAGCCTGGGGTTGGCCCCAGATGGAATATCTTCCACACCTGTGGTGTGAGATCTaGAGACCCACCCAGCAGAGG +
Preference number: 2 (lower is better)
Translates to: KLSAGPAWGWPQMEYLPHLWCEI*RPTQQR
Trigger: CCTCTGCTGGGTGGGTCTGCAGATCTCACACCACAG...GTGTGGAAGATATTCCATCTGGGGCCAACCCCAGGCTGGGCCTGCGCTGAGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR GCA 90 bp AGGCACGCGAGCCACGGCCACGCTTTATTGCTTAAGACGCACACAGAACACAGATGGGGGAGGTCCCTCTaGTCAGTGCCCAGGTGGCAG +
Preference number: 2 (lower is better)
Translates to: RHASHGHALLLKTHTEHRWGRSL*SVPRWQ
Trigger: CTGCCACCTGGGCACTGAGCAGAGGGACCTCCCCCA...TCTGTGTTCTGTGTGCGTCTTAAGCAATAAAGCGTGGCCGTGGCTCGCGTGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR GCA 90 bp AGGCACGCGAGCCACGGCCACGCTTTATTGCTTAAGACGCACACAGAACACAGAGCAGCAGTGGGAGGTTaGTGGCAGCGGCAGGCTGTC +
Preference number: 2 (lower is better)
Translates to: RHASHGHALLLKTHTEHRAAVGG*WQRQAV
Trigger: GACAGCCTGCCGCTGCCAGCAACCTCCCACTGCTGC...TCTGTGTTCTGTGTGCGTCTTAAGCAATAAAGCGTGGCCGTGGCTCGCGTGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR GCA 90 bp CCCGAGAGGTGTTCCTGGGAAACAGTTCACTTAGCAAGACCCAGTACCTGCGCTGGTGACAGTGGGCGCTaGACCCTAGGCAGCAGTGGG +
Preference number: 2 (lower is better)
Translates to: PERCSWETVHLARPSTCAGDSGR*TLGSSG
Trigger: CCCACTGCTGCCTAGGGTGCAGCGCCCACTGTCACC...AGCGCAGGTACTGGGTCTTGCTAAGTGAACTGTTTCCCAGGAACACCTCTCGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR GCA 90 bp GGGTTGGCCCCAGATGGAATATCTTCCACACCCGCCCGCTTCTGCCAAACCCCAAGTCACTGCCAAGGCTaGAGTTCCAGGTACCGGGGT +
Preference number: 2 (lower is better)
Translates to: GLAPDGISSTPARFCQTPSHCQG*SSRYRG
Trigger: ACCCCGGTACCTGGAACTGCAGCCTTGGCAGTGACT...TGGGGTTTGGCAGAAGCGGGCGGGTGTGGAAGATATTCCATCTGGGGCCAACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR GCA 90 bp CAGCAGGAGCACCTGAGTGGGGCTGAGGTCAGACCCACTAACCCACTAATGGGGCAGCTGTCCAGTCACTaGCAAGGCTGCAGTTCCAGG +
Preference number: 2 (lower is better)
Translates to: QQEHLSGAEVRPTNPLMGQLSSH*QGCSSR
Trigger: CCTGGAACTGCAGCCTTGGCAGTGACTGGACAGCTG...CCCCATTAGTGGGTTAGTGGGTCTGACCTCAGCCCCACTCAGGTGCTCCTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR GCA 90 bp GGGTTGGCCCCAGATGGAATATCTTCCACACCCGCCCGCTTCTGCCAAACCCCAGAGGGAATATGGGGGTaGACATCCTGGGCACCAGCT +
Preference number: 2 (lower is better)
Translates to: GLAPDGISSTPARFCQTPEGIWG*TSWAPA
Trigger: AGCTGGTGCCCAGGATGTGCACCCCCATATTCCCTC...TGGGGTTTGGCAGAAGCGGGCGGGTGTGGAAGATATTCCATCTGGGGCCAACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR GCA 90 bp AGGCACGCGAGCCACGGCCACGCTTTATTGCTTAAGACGCACACAGAACACAGACCCAGCCCACCAGCCTaGCACTCCTGGCCTCAGATG +
Preference number: 2 (lower is better)
Translates to: RHASHGHALLLKTHTEHRPSPPA*HSWPQM
Trigger: CATCTGAGGCCAGGAGTGGCAGGCTGGTGGGCTGGG...TCTGTGTTCTGTGTGCGTCTTAAGCAATAAAGCGTGGCCGTGGCTCGCGTGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR CCA 90 bp GTGACTGTGGCCTCTGCCCAGTTCTTAAAAGGCAGAAGCTCCCTGAGGGCAGGGGGCTGTGCCTCAGCGTaGACAGTCCAGGCCTCACTT +
Preference number: 2 (lower is better)
Translates to: VTVASAQFLKGRSSLRAGGCASA*TVQASL
Trigger: AAGTGAGGCCTGGACTGTCCACGCTGAGGCACAGCC...CCCTGCCCTCAGGGAGCTTCTGCCTTTTAAGAACTGGGCAGAGGCCACAGTCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000625979.2
ENST00000629431.2
3UTR-3UTR CCA 90 bp GCAGTTCCAGGTACCGGGGTGCACCTTAGGAGCCCTGTGGGCTTCTTCAGAAGGAGGCAGCCCTGTCTGTaGTGTGAGATCTGCAGACCC +
Preference number: 2 (lower is better)
Translates to: AVPGTGVHLRSPVGFFRRRQPCL*CEICRP
Trigger: GGGTCTGCAGATCTCACACCACAGACAGGGCTGCCT...CCTTCTGAAGAAGCCCACAGGGCTCCTAAGGTGCACCCCGGTACCTGGAACTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR CCA 90 bp CAGCAGGAGCACCTGAGTGGGGCTGAGGTCAGACCCACTAACCCACTAATGGGGAGGCAGCCCTGTCTGTaGTGTGAGATCTGCAGACCC +
Preference number: 2 (lower is better)
Translates to: QQEHLSGAEVRPTNPLMGRQPCL*CEICRP
Trigger: GGGTCTGCAGATCTCACACCACAGACAGGGCTGCCT...CCCCATTAGTGGGTTAGTGGGTCTGACCTCAGCCCCACTCAGGTGCTCCTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR CCA 90 bp GAAGCTCAGCGCAGGCCCAGCCTGGGGTTGGCCCCAGATGGAATATCTTCCACAAGGCAGCCCTGTCTGTaGTGTGAGATCTGCAGACCC +
Preference number: 2 (lower is better)
Translates to: EAQRRPSLGLAPDGISSTRQPCL*CEICRP
Trigger: GGGTCTGCAGATCTCACACCACAGACAGGGCTGCCT...TGTGGAAGATATTCCATCTGGGGCCAACCCCAGGCTGGGCCTGCGCTGAGCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR CCA 90 bp AGGCACGCGAGCCACGGCCACGCTTTATTGCTTAAGACGCACACAGAACACAGAGCAGTGGGAGGTTGCTaGCAGCGGCAGGCTGTCCCA +
Preference number: 2 (lower is better)
Translates to: RHASHGHALLLKTHTEHRAVGGC*QRQAVP
Trigger: TGGGACAGCCTGCCGCTGCCAGCAACCTCCCACTGC...TCTGTGTTCTGTGTGCGTCTTAAGCAATAAAGCGTGGCCGTGGCTCGCGTGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR CCA 90 bp GAGGTGACTGTGGCCTCTGCCCAGTTCTTAAAAGGCAGAAGCTCCCTGAGGGCACGAGGGGCCTTGAGGTaGCCTGTCCAAGGTTCCCAG +
Preference number: 2 (lower is better)
Translates to: EVTVASAQFLKGRSSLRARGALR*PVQGSQ
Trigger: CTGGGAACCTTGGACAGGCCACCTCAAGGCCCCTCG...TGCCCTCAGGGAGCTTCTGCCTTTTAAGAACTGGGCAGAGGCCACAGTCACCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR CCA 90 bp GTGACTGTGGCCTCTGCCCAGTTCTTAAAAGGCAGAAGCTCCCTGAGGGCAGGGAATGGGGCTGGGCTGTaGCTGATGTTGACGGGGCCA +
Preference number: 2 (lower is better)
Translates to: VTVASAQFLKGRSSLRAGNGAGL*LMLTGP
Trigger: TGGCCCCGTCAACATCAGCCACAGCCCAGCCCCATT...CCCTGCCCTCAGGGAGCTTCTGCCTTTTAAGAACTGGGCAGAGGCCACAGTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR TCA 90 bp CCCGAGAGGTGTTCCTGGGAAACAGTTCACTTAGCAAGACCCAGTACCTGCGCTCTTCAGAAGGCAGGGTaGCAGTGGGCGCTGCACCCT +
Preference number: 2 (lower is better)
Translates to: PERCSWETVHLARPSTCALQKAG*QWALHP
Trigger: AGGGTGCAGCGCCCACTGTCACCCTGCCTTCTGAAG...AGCGCAGGTACTGGGTCTTGCTAAGTGAACTGTTTCCCAGGAACACCTCTCGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR TCA 90 bp TTGTGGGAGGTAGACAGGTCTCACTGCATACATGGGACAGATGTGTGCACCCACGCAGCCGAGGGGCCTTaGGGTGGCCTGTCCAAGGTT +
Preference number: 2 (lower is better)
Translates to: LWEVDRSHCIHGTDVCTHAAEGP*GGLSKV
Trigger: AACCTTGGACAGGCCACCTCAAGGCCCCTCGGCTGC...GTGGGTGCACACATCTGTCCCATGTATGCAGTGAGACCTGTCTACCTCCCACAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR TCA 90 bp CTTGTGGGAGGTAGACAGGTCTCACTGCATACATGGGACAGATGTGTGCACCCAAAGGCAGAAGCTCCCTaGGGGCAGGGCTTGGGCAGG +
Preference number: 2 (lower is better)
Translates to: LVGGRQVSLHTWDRCVHPKAEAP*GQGLGR
Trigger: CCTGCCCAAGCCCTGCCCTCAGGGAGCTTCTGCCTT...TGGGTGCACACATCTGTCCCATGTATGCAGTGAGACCTGTCTACCTCCCACAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR TCA 90 bp TTGTGGGAGGTAGACAGGTCTCACTGCATACATGGGACAGATGTGTGCACCCACCACCTGCCCGATGGCTaGGAGCCAGCCTCACGGTCA +
Preference number: 2 (lower is better)
Translates to: LWEVDRSHCIHGTDVCTHHLPDG*EPASRS
Trigger: TGACCGTGAGGCTGGCTCTCAGCCATCGGGCAGGTG...GTGGGTGCACACATCTGTCCCATGTATGCAGTGAGACCTGTCTACCTCCCACAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR GCA 90 bp CCCGAGAGGTGTTCCTGGGAAACAGTTCACTTAGCAAGACCCAGTACCTGCGCTCCCCTCTCCAGGCTGTaGCTCAGCGTGGACAGTCCA +
Preference number: 2 (lower is better)
Translates to: PERCSWETVHLARPSTCAPLSRL*LSVDSP
Trigger: TGGACTGTCCACGCTGAGGCACAGCCTGGAGAGGGG...AGCGCAGGTACTGGGTCTTGCTAAGTGAACTGTTTCCCAGGAACACCTCTCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR GCA 90 bp TTGTGGGAGGTAGACAGGTCTCACTGCATACATGGGACAGATGTGTGCACCCACCCCAGCCCACCAGCCTaGCACTCCTGGCCTCAGATG +
Preference number: 2 (lower is better)
Translates to: LWEVDRSHCIHGTDVCTHPSPPA*HSWPQM
Trigger: CATCTGAGGCCAGGAGTGGCAGGCTGGTGGGCTGGG...GTGGGTGCACACATCTGTCCCATGTATGCAGTGAGACCTGTCTACCTCCCACAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR CCA 90 bp GTGACTGTGGCCTCTGCCCAGTTCTTAAAAGGCAGAAGCTCCCTGAGGGCAGGGAGGCAGCCCTGTCTGTaGTGTGAGATCTGCAGACCC +
Preference number: 2 (lower is better)
Translates to: VTVASAQFLKGRSSLRAGRQPCL*CEICRP
Trigger: GGGTCTGCAGATCTCACACCACAGACAGGGCTGCCT...CCCTGCCCTCAGGGAGCTTCTGCCTTTTAAGAACTGGGCAGAGGCCACAGTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR CCA 90 bp CTTGTGGGAGGTAGACAGGTCTCACTGCATACATGGGACAGATGTGTGCACCCATGCTCAGTGCCCAGGTaGCAGGGTCCCACTTGCCCC +
Preference number: 2 (lower is better)
Translates to: LVGGRQVSLHTWDRCVHPCSVPR*QGPTCP
Trigger: GGGGCAAGTGGGACCCTGCCACCTGGGCACTGAGCA...TGGGTGCACACATCTGTCCCATGTATGCAGTGAGACCTGTCTACCTCCCACAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR CCA 90 bp GAGGTGACTGTGGCCTCTGCCCAGTTCTTAAAAGGCAGAAGCTCCCTGAGGGCAAATGGGGCTGGGCTGTaGCTGATGTTGACGGGGCCA +
Preference number: 2 (lower is better)
Translates to: EVTVASAQFLKGRSSLRANGAGL*LMLTGP
Trigger: TGGCCCCGTCAACATCAGCCACAGCCCAGCCCCATT...TGCCCTCAGGGAGCTTCTGCCTTTTAAGAACTGGGCAGAGGCCACAGTCACCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR CCA 90 bp AGGCACGCGAGCCACGGCCACGCTTTATTGCTTAAGACGCACACAGAACACAGATCTCTGCATCCTCCCTaGGTAGGCCTGGCTCCGGAC +
Preference number: 2 (lower is better)
Translates to: RHASHGHALLLKTHTEHRSLHPP*VGLAPD
Trigger: GTCCGGAGCCAGGCCTACCCAGGGAGGATGCAGAGA...TCTGTGTTCTGTGTGCGTCTTAAGCAATAAAGCGTGGCCGTGGCTCGCGTGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR CCA 90 bp TTGTGGGAGGTAGACAGGTCTCACTGCATACATGGGACAGATGTGTGCACCCACCAGGCACCTGCCCGATaGCTGAGAGCCAGCCTCACG +
Preference number: 2 (lower is better)
Translates to: LWEVDRSHCIHGTDVCTHQAPAR*LRASLT
Trigger: CGTGAGGCTGGCTCTCAGCCATCGGGCAGGTGCCTG...GTGGGTGCACACATCTGTCCCATGTATGCAGTGAGACCTGTCTACCTCCCACAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR CCA 90 bp AGGCACGCGAGCCACGGCCACGCTTTATTGCTTAAGACGCACACAGAACACAGACCAGACTCCCAGGGGTaGGATGCTGCTGACCCAGGA +
Preference number: 2 (lower is better)
Translates to: RHASHGHALLLKTHTEHRPDSQG*DAADPG
Trigger: TCCTGGGTCAGCAGCATCCCACCCCTGGGAGTCTGG...TCTGTGTTCTGTGTGCGTCTTAAGCAATAAAGCGTGGCCGTGGCTCGCGTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR TCA 90 bp AGGCACGCGAGCCACGGCCACGCTTTATTGCTTAAGACGCACACAGAACACAGAGCCCTGTCTGTGGTGTaGGATCTGCAGACCCACCCA +
Preference number: 2 (lower is better)
Translates to: RHASHGHALLLKTHTEHRALSVV*DLQTHP
Trigger: TGGGTGGGTCTGCAGATCTCACACCACAGACAGGGC...TCTGTGTTCTGTGTGCGTCTTAAGCAATAAAGCGTGGCCGTGGCTCGCGTGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR TCA 90 bp CTTGTGGGAGGTAGACAGGTCTCACTGCATACATGGGACAGATGTGTGCACCCACTTCAGAAGGCAGGGTaGCAGTGGGCGCTGCACCCT +
Preference number: 2 (lower is better)
Translates to: LVGGRQVSLHTWDRCVHPLQKAG*QWALHP
Trigger: AGGGTGCAGCGCCCACTGTCACCCTGCCTTCTGAAG...TGGGTGCACACATCTGTCCCATGTATGCAGTGAGACCTGTCTACCTCCCACAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR TCA 90 bp AGGCACGCGAGCCACGGCCACGCTTTATTGCTTAAGACGCACACAGAACACAGAGTCTCTGGCTGTCAGTaGGACCCCTCTGGAAAGGGC +
Preference number: 2 (lower is better)
Translates to: RHASHGHALLLKTHTEHRVSGCQ*DPSGKG
Trigger: GCCCTTTCCAGAGGGGTCTCACTGACAGCCAGAGAC...TCTGTGTTCTGTGTGCGTCTTAAGCAATAAAGCGTGGCCGTGGCTCGCGTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR GCA 90 bp CCCGAGAGGTGTTCCTGGGAAACAGTTCACTTAGCAAGACCCAGTACCTGCGCTAGGTGTAGGGACACGTaGAAAGGCCCCTCTCCAGGC +
Preference number: 2 (lower is better)
Translates to: PERCSWETVHLARPSTCARCRDT*KGPSPG
Trigger: GCCTGGAGAGGGGCCTTTGCACGTGTCCCTACACCT...AGCGCAGGTACTGGGTCTTGCTAAGTGAACTGTTTCCCAGGAACACCTCTCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR GCA 90 bp AGGCACGCGAGCCACGGCCACGCTTTATTGCTTAAGACGCACACAGAACACAGAAGCTGCTGCAGGCTCTaGCTCAAGTCCAGCAGCCCA +
Preference number: 2 (lower is better)
Translates to: RHASHGHALLLKTHTEHRSCCRL*LKSSSP
Trigger: TGGGCTGCTGGACTTGAGGCAGAGCCTGCAGCAGCT...TCTGTGTTCTGTGTGCGTCTTAAGCAATAAAGCGTGGCCGTGGCTCGCGTGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR GCA 90 bp CCCGAGAGGTGTTCCTGGGAAACAGTTCACTTAGCAAGACCCAGTACCTGCGCTAGCTGCTGCAGGCTCTaGCTCAAGTCCAGCAGCCCA +
Preference number: 2 (lower is better)
Translates to: PERCSWETVHLARPSTCASCCRL*LKSSSP
Trigger: TGGGCTGCTGGACTTGAGGCAGAGCCTGCAGCAGCT...AGCGCAGGTACTGGGTCTTGCTAAGTGAACTGTTTCCCAGGAACACCTCTCGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR GCA 90 bp GAGGTGACTGTGGCCTCTGCCCAGTTCTTAAAAGGCAGAAGCTCCCTGAGGGCATGTCCACACAGCTGCTaGAGGCTCTGCCTCAAGTCC +
Preference number: 2 (lower is better)
Translates to: EVTVASAQFLKGRSSLRACPHSC*RLCLKS
Trigger: GGACTTGAGGCAGAGCCTGCAGCAGCTGTGTGGACA...TGCCCTCAGGGAGCTTCTGCCTTTTAAGAACTGGGCAGAGGCCACAGTCACCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR GCA 90 bp CGCAGATGGGCCCGAGAGGTGTTCCTGGGAAACAGTTCACTTAGCAAGACCCAGTGTCCACACAGCTGCTaGAGGCTCTGCCTCAAGTCC +
Preference number: 2 (lower is better)
Translates to: RRWAREVFLGNSSLSKTQCPHSC*RLCLKS
Trigger: GGACTTGAGGCAGAGCCTGCAGCAGCTGTGTGGACA...CTGGGTCTTGCTAAGTGAACTGTTTCCCAGGAACACCTCTCGGGCCCATCTGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR GCA 90 bp GAGGTGACTGTGGCCTCTGCCCAGTTCTTAAAAGGCAGAAGCTCCCTGAGGGCACTGTGGTGTGAGATCTaGAGACCCACCCAGCAGAGG +
Preference number: 2 (lower is better)
Translates to: EVTVASAQFLKGRSSLRALWCEI*RPTQQR
Trigger: CCTCTGCTGGGTGGGTCTGCAGATCTCACACCACAG...TGCCCTCAGGGAGCTTCTGCCTTTTAAGAACTGGGCAGAGGCCACAGTCACCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR GCA 90 bp GAGGTGACTGTGGCCTCTGCCCAGTTCTTAAAAGGCAGAAGCTCCCTGAGGGCAATCTCCAGGGGAAGCTaGTCCCAGGTCACAGCAGGT +
Preference number: 2 (lower is better)
Translates to: EVTVASAQFLKGRSSLRAISRGS*SQVTAG
Trigger: ACCTGCTGTGACCTGGGAGCAGCTTCCCCTGGAGAT...TGCCCTCAGGGAGCTTCTGCCTTTTAAGAACTGGGCAGAGGCCACAGTCACCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR GCA 90 bp AGGCACGCGAGCCACGGCCACGCTTTATTGCTTAAGACGCACACAGAACACAGATTCCAGGTACCGGGGTaGACCTTAGGAGCCCTGTGG +
Preference number: 2 (lower is better)
Translates to: RHASHGHALLLKTHTEHRFQVPG*TLGALW
Trigger: CCACAGGGCTCCTAAGGTGCACCCCGGTACCTGGAA...TCTGTGTTCTGTGTGCGTCTTAAGCAATAAAGCGTGGCCGTGGCTCGCGTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR GCA 90 bp GAGGTGACTGTGGCCTCTGCCCAGTTCTTAAAAGGCAGAAGCTCCCTGAGGGCACAGCTGTCCAGTCACTaGCAAGGCTGCAGTTCCAGG +
Preference number: 2 (lower is better)
Translates to: EVTVASAQFLKGRSSLRAQLSSH*QGCSSR
Trigger: CCTGGAACTGCAGCCTTGGCAGTGACTGGACAGCTG...TGCCCTCAGGGAGCTTCTGCCTTTTAAGAACTGGGCAGAGGCCACAGTCACCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR GCA 90 bp CCCGAGAGGTGTTCCTGGGAAACAGTTCACTTAGCAAGACCCAGTACCTGCGCTGTGCCAGGGAGAGCCTaGTCTCCCCACTTCCTTAGC +
Preference number: 2 (lower is better)
Translates to: PERCSWETVHLARPSTCAVPGRA*SPHFLS
Trigger: GCTAAGGAAGTGGGGAGAGCAGGCTCTCCCTGGCAC...AGCGCAGGTACTGGGTCTTGCTAAGTGAACTGTTTCCCAGGAACACCTCTCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR GCA 90 bp GGGTTGGCCCCAGATGGAATATCTTCCACACCCGCCCGCTTCTGCCAAACCCCAGGTGACTGTGGCCTCTaGCCAGTTCTTAAAAGGCAG +
Preference number: 2 (lower is better)
Translates to: GLAPDGISSTPARFCQTPGDCGL*PVLKRQ
Trigger: CTGCCTTTTAAGAACTGGGCAGAGGCCACAGTCACC...TGGGGTTTGGCAGAAGCGGGCGGGTGTGGAAGATATTCCATCTGGGGCCAACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR GCA 90 bp CGCAGATGGGCCCGAGAGGTGTTCCTGGGAAACAGTTCACTTAGCAAGACCCAGGAGGGAATATGGGGGTaGACATCCTGGGCACCAGCT +
Preference number: 2 (lower is better)
Translates to: RRWAREVFLGNSSLSKTQEGIWG*TSWAPA
Trigger: AGCTGGTGCCCAGGATGTGCACCCCCATATTCCCTC...CTGGGTCTTGCTAAGTGAACTGTTTCCCAGGAACACCTCTCGGGCCCATCTGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR GCA 90 bp TTGTGGGAGGTAGACAGGTCTCACTGCATACATGGGACAGATGTGTGCACCCACACACCCGCCCGCTTCTaGCAAACCCCACCTGGGCTA +
Preference number: 2 (lower is better)
Translates to: LWEVDRSHCIHGTDVCTHTPARF*QTPPGL
Trigger: TAGCCCAGGTGGGGTTTGGCAGAAGCGGGCGGGTGT...GTGGGTGCACACATCTGTCCCATGTATGCAGTGAGACCTGTCTACCTCCCACAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR CCA 90 bp GCCACTCCCAGCCTCAGACGCAGATGGGCCCGAGAGGTGTTCCTGGGAAACAGTTGGCTTAAGCCAGTCTaGAGAAAGGAGCAGAGGACT +
Preference number: 2 (lower is better)
Translates to: ATPSLRRRWAREVFLGNSWLKPV*RKEQRT
Trigger: AGTCCTCTGCTCCTTTCTCCAGACTGGCTTAAGCCA...ACTGTTTCCCAGGAACACCTCTCGGGCCCATCTGCGTCTGAGGCTGGGAGTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR CCA 90 bp TTGTGGGAGGTAGACAGGTCTCACTGCATACATGGGACAGATGTGTGCACCCACCGAGGGGCCTTGAGGTaGCCTGTCCAAGGTTCCCAG +
Preference number: 2 (lower is better)
Translates to: LWEVDRSHCIHGTDVCTHRGALR*PVQGSQ
Trigger: CTGGGAACCTTGGACAGGCCACCTCAAGGCCCCTCG...GTGGGTGCACACATCTGTCCCATGTATGCAGTGAGACCTGTCTACCTCCCACAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR CCA 90 bp TTGTGGGAGGTAGACAGGTCTCACTGCATACATGGGACAGATGTGTGCACCCACTCTCTGCATCCTCCCTaGGTAGGCCTGGCTCCGGAC +
Preference number: 2 (lower is better)
Translates to: LWEVDRSHCIHGTDVCTHSLHPP*VGLAPD
Trigger: GTCCGGAGCCAGGCCTACCCAGGGAGGATGCAGAGA...GTGGGTGCACACATCTGTCCCATGTATGCAGTGAGACCTGTCTACCTCCCACAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR CCA 90 bp AGGCACGCGAGCCACGGCCACGCTTTATTGCTTAAGACGCACACAGAACACAGATGGGGGTGCACATCCTaGGCACCAGCTCTCTGCATC +
Preference number: 2 (lower is better)
Translates to: RHASHGHALLLKTHTEHRWGCTS*APALCI
Trigger: GATGCAGAGAGCTGGTGCCCAGGATGTGCACCCCCA...TCTGTGTTCTGTGTGCGTCTTAAGCAATAAAGCGTGGCCGTGGCTCGCGTGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR CCA 90 bp AGGCACGCGAGCCACGGCCACGCTTTATTGCTTAAGACGCACACAGAACACAGAAGCCTCAGACGCAGATaGGCCCGAGAGGTGTTCCTG +
Preference number: 2 (lower is better)
Translates to: RHASHGHALLLKTHTEHRSLRRR*AREVFL
Trigger: CAGGAACACCTCTCGGGCCCATCTGCGTCTGAGGCT...TCTGTGTTCTGTGTGCGTCTTAAGCAATAAAGCGTGGCCGTGGCTCGCGTGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR TCA 90 bp TTGTGGGAGGTAGACAGGTCTCACTGCATACATGGGACAGATGTGTGCACCCACGCCCTGTCTGTGGTGTaGGATCTGCAGACCCACCCA +
Preference number: 2 (lower is better)
Translates to: LWEVDRSHCIHGTDVCTHALSVV*DLQTHP
Trigger: TGGGTGGGTCTGCAGATCTCACACCACAGACAGGGC...GTGGGTGCACACATCTGTCCCATGTATGCAGTGAGACCTGTCTACCTCCCACAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR TCA 90 bp AGGCACGCGAGCCACGGCCACGCTTTATTGCTTAAGACGCACACAGAACACAGAACACACACAGCCCTTTaGACCCAGCACTGGCCTGAG +
Preference number: 2 (lower is better)
Translates to: RHASHGHALLLKTHTEHRTHTAL*TQHWPE
Trigger: CTCAGGCCAGTGCTGGGTTCAAAGGGCTGTGTGTGT...TCTGTGTTCTGTGTGCGTCTTAAGCAATAAAGCGTGGCCGTGGCTCGCGTGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR GCA 90 bp TTGTGGGAGGTAGACAGGTCTCACTGCATACATGGGACAGATGTGTGCACCCACAGGTGTAGGGACACGTaGAAAGGCCCCTCTCCAGGC +
Preference number: 2 (lower is better)
Translates to: LWEVDRSHCIHGTDVCTHRCRDT*KGPSPG
Trigger: GCCTGGAGAGGGGCCTTTGCACGTGTCCCTACACCT...GTGGGTGCACACATCTGTCCCATGTATGCAGTGAGACCTGTCTACCTCCCACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR GCA 90 bp CTTGTGGGAGGTAGACAGGTCTCACTGCATACATGGGACAGATGTGTGCACCCAAGCTGCTGCAGGCTCTaGCTCAAGTCCAGCAGCCCA +
Preference number: 2 (lower is better)
Translates to: LVGGRQVSLHTWDRCVHPSCCRL*LKSSSP
Trigger: TGGGCTGCTGGACTTGAGGCAGAGCCTGCAGCAGCT...TGGGTGCACACATCTGTCCCATGTATGCAGTGAGACCTGTCTACCTCCCACAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR GCA 90 bp CCCGAGAGGTGTTCCTGGGAAACAGTTCACTTAGCAAGACCCAGTACCTGCGCTATCTCCAGGGGAAGCTaGTCCCAGGTCACAGCAGGT +
Preference number: 2 (lower is better)
Translates to: PERCSWETVHLARPSTCAISRGS*SQVTAG
Trigger: ACCTGCTGTGACCTGGGAGCAGCTTCCCCTGGAGAT...AGCGCAGGTACTGGGTCTTGCTAAGTGAACTGTTTCCCAGGAACACCTCTCGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR GCA 90 bp AGGCACGCGAGCCACGGCCACGCTTTATTGCTTAAGACGCACACAGAACACAGAATCTCCAGGGGAAGCTaGTCCCAGGTCACAGCAGGT +
Preference number: 2 (lower is better)
Translates to: RHASHGHALLLKTHTEHRISRGS*SQVTAG
Trigger: ACCTGCTGTGACCTGGGAGCAGCTTCCCCTGGAGAT...TCTGTGTTCTGTGTGCGTCTTAAGCAATAAAGCGTGGCCGTGGCTCGCGTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR GCA 90 bp AGGCACGCGAGCCACGGCCACGCTTTATTGCTTAAGACGCACACAGAACACAGAAGTCACTGCCAAGGCTaGAGTTCCAGGTACCGGGGT +
Preference number: 2 (lower is better)
Translates to: RHASHGHALLLKTHTEHRSHCQG*SSRYRG
Trigger: ACCCCGGTACCTGGAACTGCAGCCTTGGCAGTGACT...TCTGTGTTCTGTGTGCGTCTTAAGCAATAAAGCGTGGCCGTGGCTCGCGTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR GCA 90 bp AGGCACGCGAGCCACGGCCACGCTTTATTGCTTAAGACGCACACAGAACACAGAGAGGGAATATGGGGGTaGACATCCTGGGCACCAGCT +
Preference number: 2 (lower is better)
Translates to: RHASHGHALLLKTHTEHREGIWG*TSWAPA
Trigger: AGCTGGTGCCCAGGATGTGCACCCCCATATTCCCTC...TCTGTGTTCTGTGTGCGTCTTAAGCAATAAAGCGTGGCCGTGGCTCGCGTGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR CCA 90 bp CAGCAGGAGCACCTGAGTGGGGCTGAGGTCAGACCCACTAACCCACTAATGGGGTGGCTTAAGCCAGTCTaGAGAAAGGAGCAGAGGACT +
Preference number: 2 (lower is better)
Translates to: QQEHLSGAEVRPTNPLMGWLKPV*RKEQRT
Trigger: AGTCCTCTGCTCCTTTCTCCAGACTGGCTTAAGCCA...CCCCATTAGTGGGTTAGTGGGTCTGACCTCAGCCCCACTCAGGTGCTCCTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR CCA 90 bp CCCGAGAGGTGTTCCTGGGAAACAGTTCACTTAGCAAGACCCAGTACCTGCGCTAGGCAGCCCTGTCTGTaGTGTGAGATCTGCAGACCC +
Preference number: 2 (lower is better)
Translates to: PERCSWETVHLARPSTCARQPCL*CEICRP
Trigger: GGGTCTGCAGATCTCACACCACAGACAGGGCTGCCT...AGCGCAGGTACTGGGTCTTGCTAAGTGAACTGTTTCCCAGGAACACCTCTCGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR CCA 90 bp CTTGTGGGAGGTAGACAGGTCTCACTGCATACATGGGACAGATGTGTGCACCCAAGCCTCAGACGCAGATaGGCCCGAGAGGTGTTCCTG +
Preference number: 2 (lower is better)
Translates to: LVGGRQVSLHTWDRCVHPSLRRR*AREVFL
Trigger: CAGGAACACCTCTCGGGCCCATCTGCGTCTGAGGCT...TGGGTGCACACATCTGTCCCATGTATGCAGTGAGACCTGTCTACCTCCCACAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR CAA 90 bp CAGAAGGGAGCAGAGGGCAGGCACGCGAGCCACGGCCACGCTTTATaGCTTAAGACGCACACAGAACACAGAGGAACAAACAAGGAGGAA +
Preference number: 2 (lower is better)
Translates to: QKGAEGRHASHGHAL*LKTHTEHRGTNKEE
Trigger: TTCCTCCTTGTTTGTTCCTCTGTGTTCTGTGTGCGTCTTAAGCAATAAAGCGTGGCCGTGGCTCGCGTGCCTGCCCTCTGCTCCCTTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR GCA 90 bp CTTGTGGGAGGTAGACAGGTCTCACTGCATACATGGGACAGATGTGTGCACCCACTGTGGTGTGAGATCTaGAGACCCACCCAGCAGAGG +
Preference number: 2 (lower is better)
Translates to: LVGGRQVSLHTWDRCVHPLWCEI*RPTQQR
Trigger: CCTCTGCTGGGTGGGTCTGCAGATCTCACACCACAG...TGGGTGCACACATCTGTCCCATGTATGCAGTGAGACCTGTCTACCTCCCACAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR GCA 90 bp CTTGTGGGAGGTAGACAGGTCTCACTGCATACATGGGACAGATGTGTGCACCCACAGCTGTCCAGTCACTaGCAAGGCTGCAGTTCCAGG +
Preference number: 2 (lower is better)
Translates to: LVGGRQVSLHTWDRCVHPQLSSH*QGCSSR
Trigger: CCTGGAACTGCAGCCTTGGCAGTGACTGGACAGCTG...TGGGTGCACACATCTGTCCCATGTATGCAGTGAGACCTGTCTACCTCCCACAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR GCA 90 bp CGCAGATGGGCCCGAGAGGTGTTCCTGGGAAACAGTTCACTTAGCAAGACCCAGGGTGACTGTGGCCTCTaGCCAGTTCTTAAAAGGCAG +
Preference number: 2 (lower is better)
Translates to: RRWAREVFLGNSSLSKTQGDCGL*PVLKRQ
Trigger: CTGCCTTTTAAGAACTGGGCAGAGGCCACAGTCACC...CTGGGTCTTGCTAAGTGAACTGTTTCCCAGGAACACCTCTCGGGCCCATCTGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR GCA 90 bp TTGTGGGAGGTAGACAGGTCTCACTGCATACATGGGACAGATGTGTGCACCCACGAGGGAATATGGGGGTaGACATCCTGGGCACCAGCT +
Preference number: 2 (lower is better)
Translates to: LWEVDRSHCIHGTDVCTHEGIWG*TSWAPA
Trigger: AGCTGGTGCCCAGGATGTGCACCCCCATATTCCCTC...GTGGGTGCACACATCTGTCCCATGTATGCAGTGAGACCTGTCTACCTCCCACAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR CCA 90 bp TTGTGGGAGGTAGACAGGTCTCACTGCATACATGGGACAGATGTGTGCACCCACAGGCAGCCCTGTCTGTaGTGTGAGATCTGCAGACCC +
Preference number: 2 (lower is better)
Translates to: LWEVDRSHCIHGTDVCTHRQPCL*CEICRP
Trigger: GGGTCTGCAGATCTCACACCACAGACAGGGCTGCCT...GTGGGTGCACACATCTGTCCCATGTATGCAGTGAGACCTGTCTACCTCCCACAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR CCA 90 bp AGGCACGCGAGCCACGGCCACGCTTTATTGCTTAAGACGCACACAGAACACAGAAGCCCTTGCTCCTTGTaGGAGGTAGACAGGTCTCAC +
Preference number: 2 (lower is better)
Translates to: RHASHGHALLLKTHTEHRSPCSL*EVDRSH
Trigger: GTGAGACCTGTCTACCTCCCACAAGGAGCAAGGGCT...TCTGTGTTCTGTGTGCGTCTTAAGCAATAAAGCGTGGCCGTGGCTCGCGTGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR GCA 90 bp CCCGAGAGGTGTTCCTGGGAAACAGTTCACTTAGCAAGACCCAGTACCTGCGCTGGTGACTGTGGCCTCTaGCCAGTTCTTAAAAGGCAG +
Preference number: 2 (lower is better)
Translates to: PERCSWETVHLARPSTCAGDCGL*PVLKRQ
Trigger: CTGCCTTTTAAGAACTGGGCAGAGGCCACAGTCACC...AGCGCAGGTACTGGGTCTTGCTAAGTGAACTGTTTCCCAGGAACACCTCTCGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR GCA 90 bp AGGCACGCGAGCCACGGCCACGCTTTATTGCTTAAGACGCACACAGAACACAGAGTAGACAGGTCTCACTaGATACATGGGACAGATGTG +
Preference number: 2 (lower is better)
Translates to: RHASHGHALLLKTHTEHRVDRSH*IHGTDV
Trigger: CACATCTGTCCCATGTATGCAGTGAGACCTGTCTAC...TCTGTGTTCTGTGTGCGTCTTAAGCAATAAAGCGTGGCCGTGGCTCGCGTGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR CCA 90 bp TTGTGGGAGGTAGACAGGTCTCACTGCATACATGGGACAGATGTGTGCACCCACCCCGAGAGGTGTTCCTaGGAAACAGTTCACTTAGCA +
Preference number: 2 (lower is better)
Translates to: LWEVDRSHCIHGTDVCTHPERCS*ETVHLA
Trigger: TGCTAAGTGAACTGTTTCCCAGGAACACCTCTCGGG...GTGGGTGCACACATCTGTCCCATGTATGCAGTGAGACCTGTCTACCTCCCACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR CAA 90 bp CAGGCACCTGCCCGATGGCTGAGAGCCAGCCTCACGGTCAGAGAGGCCAGCGGGGGGCTGTGGCTGATGTaGACGGGGCCACACCAGGGA +
Preference number: 3 (lower is better)
Translates to: QAPARWLRASLTVREASGGLWLM*TGPHQG
Trigger: TCCCTGGTGTGGCCCCGTCAACATCAGCCACAGCCC...CCCGCTGGCCTCTCTGACCGTGAGGCTGGCTCTCAGCCATCGGGCAGGTGCCTG
69% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR GCA 72 bp ACGGGGCCACACCAGGGAGAGGGTGGGCACCCTCGGTaGCAGGGAGAGCCTGCTCTCCCCACTTCCTTAGCA +
Preference number: 3 (lower is better)
Translates to: TGPHQGEGGHPR*QGEPALPTSLA
Trigger: TGCTAAGGAAGTGGGGAGAGCAGGCTCTCCCTGGCACCGAGGGTGCCCACCCTCTCCCTGGTGTGGCCCCGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR GCA 72 bp ACCCCACCTGGGCTAAGCCAGGCCCGACCAGGCACCTaGCCGATGGCTGAGAGCCAGCCTCACGGTCAGAGA +
Preference number: 3 (lower is better)
Translates to: TPPGLSQARPGT*PMAESQPHGQR
Trigger: TCTCTGACCGTGAGGCTGGCTCTCAGCCATCGGGCAGGTGCCTGGTCGGGCCTGGCTTAGCCCAGGTGGGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR CAA 90 bp GGCCCAGCCTGGGGTTGGCCCCAGATGGAATATCTTCCACACCCGCCCGCTTCTGGCAGCAGTGGGAGGTaGCTGGCAGCGGCAGGCTGT +
Preference number: 3 (lower is better)
Translates to: GPAWGWPQMEYLPHPPASGSSGR*LAAAGC
Trigger: ACAGCCTGCCGCTGCCAGCAACCTCCCACTGCTGCC...AGAAGCGGGCGGGTGTGGAAGATATTCCATCTGGGGCCAACCCCAGGCTGGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR CAA 90 bp GGCCCAGCCTGGGGTTGGCCCCAGATGGAATATCTTCCACACCCGCCCGCTTCTGGGCTGTGGCTGATGTaGACGGGGCCACACCAGGGA +
Preference number: 3 (lower is better)
Translates to: GPAWGWPQMEYLPHPPASGLWLM*TGPHQG
Trigger: TCCCTGGTGTGGCCCCGTCAACATCAGCCACAGCCC...AGAAGCGGGCGGGTGTGGAAGATATTCCATCTGGGGCCAACCCCAGGCTGGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR TCA 72 bp TGCACAGCTGCAGACTTGCTGGGAACCTGGGACAGGTaGCACGCCCACTCTCGCCTGTGGCCCAGGGCCTTC +
Preference number: 3 (lower is better)
Translates to: CTAADLLGTWDR*HAHSRLWPRAF
Trigger: GAAGGCCCTGGGCCACAGGCGAGAGTGGGCGTGTCACCTGTCCCAGGTTCCCAGCAAGTCTGCAGCTGTGCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR GCA 72 bp CTGTGGCCCAGGGCCTTCCACCTCTGCATCCAGCCATaGACCCACCATTTCCCCACAGGGTACAGGGGCAGC +
Preference number: 3 (lower is better)
Translates to: LWPRAFHLCIQP*THHFPTGYRGS
Trigger: GCTGCCCCTGTACCCTGTGGGGAAATGGTGGGTGCATGGCTGGATGCAGAGGTGGAAGGCCCTGGGCCACAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR CCA 72 bp GCACATGTCCACCAGGCTATAATGCCCCTGCCACCCTaGGGCTCAGCTGGCCAGACTCCCAGGGGTGGGATG +
Preference number: 3 (lower is better)
Translates to: AHVHQAIMPLPP*GSAGQTPRGGM
Trigger: CATCCCACCCCTGGGAGTCTGGCCAGCTGAGCCCCAGGGTGGCAGGGGCATTATAGCCTGGTGGACATGTGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR CAA 90 bp AAGCTCAGCGCAGGCCCAGCCTGGGGTTGGCCCCAGATGGAATATCTTCCACACGGCAGCAGTGGGAGGTaGCTGGCAGCGGCAGGCTGT +
Preference number: 3 (lower is better)
Translates to: KLSAGPAWGWPQMEYLPHGSSGR*LAAAGC
Trigger: ACAGCCTGCCGCTGCCAGCAACCTCCCACTGCTGCC...GTGTGGAAGATATTCCATCTGGGGCCAACCCCAGGCTGGGCCTGCGCTGAGCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR CAA 90 bp GGGGTTGGCCCCAGATGGAATATCTTCCACACCCGCCCGCTTCTGCCAAACCCCGGGCTGTGGCTGATGTaGACGGGGCCACACCAGGGA +
Preference number: 3 (lower is better)
Translates to: GVGPRWNIFHTRPLLPNPGLWLM*TGPHQG
Trigger: TCCCTGGTGTGGCCCCGTCAACATCAGCCACAGCCC...GGGGTTTGGCAGAAGCGGGCGGGTGTGGAAGATATTCCATCTGGGGCCAACCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR GCA 72 bp GCCCCAGATGGAATATCTTCCACACCCGCCCGCTTCTaGCAAACCCCACCTGGGCTAAGCCAGGCCCGACCA +
Preference number: 3 (lower is better)
Translates to: APDGISSTPARF*QTPPGLSQARP
Trigger: TGGTCGGGCCTGGCTTAGCCCAGGTGGGGTTTGGCAGAAGCGGGCGGGTGTGGAAGATATTCCATCTGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR CCA 72 bp AGCTCAGCGCAGGCCCAGCCTGGGGTTGGCCCCAGATaGAATATCTTCCACACCCGCCCGCTTCTGCCAAAC +
Preference number: 3 (lower is better)
Translates to: SSAQAQPGVGPR*NIFHTRPLLPN
Trigger: GTTTGGCAGAAGCGGGCGGGTGTGGAAGATATTCCATCTGGGGCCAACCCCAGGCTGGGCCTGCGCTGAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR CCA 72 bp GTACCTGCGCTCCAGAAGCTCAGCGCAGGCCCAGCCTaGGGTTGGCCCCAGATGGAATATCTTCCACACCCG +
Preference number: 3 (lower is better)
Translates to: VPALQKLSAGPA*GWPQMEYLPHP
Trigger: CGGGTGTGGAAGATATTCCATCTGGGGCCAACCCCAGGCTGGGCCTGCGCTGAGCTTCTGGAGCGCAGGTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR CAA 90 bp AAGCTCAGCGCAGGCCCAGCCTGGGGTTGGCCCCAGATGGAATATCTTCCACACGGGCTGTGGCTGATGTaGACGGGGCCACACCAGGGA +
Preference number: 3 (lower is better)
Translates to: KLSAGPAWGWPQMEYLPHGLWLM*TGPHQG
Trigger: TCCCTGGTGTGGCCCCGTCAACATCAGCCACAGCCC...GTGTGGAAGATATTCCATCTGGGGCCAACCCCAGGCTGGGCCTGCGCTGAGCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR CAA 90 bp GCCTGGGGTTGGCCCCAGATGGAATATCTTCCACACCCGCCCGCTTCTGCCAAAGGGCTGTGGCTGATGTaGACGGGGCCACACCAGGGA +
Preference number: 3 (lower is better)
Translates to: AWGWPQMEYLPHPPASAKGLWLM*TGPHQG
Trigger: TCCCTGGTGTGGCCCCGTCAACATCAGCCACAGCCC...TTTGGCAGAAGCGGGCGGGTGTGGAAGATATTCCATCTGGGGCCAACCCCAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR CAA 90 bp CCCGAGAGGTGTTCCTGGGAAACAGTTCACTTAGCAAGACCCAGTACCTGCGCTGGCAGCCGAGGGGCCTaGAGGTGGCCTGTCCAAGGT +
Preference number: 3 (lower is better)
Translates to: PERCSWETVHLARPSTCAGSRGA*RWPVQG
Trigger: ACCTTGGACAGGCCACCTCAAGGCCCCTCGGCTGCC...AGCGCAGGTACTGGGTCTTGCTAAGTGAACTGTTTCCCAGGAACACCTCTCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR CAA 90 bp CGCAGATGGGCCCGAGAGGTGTTCCTGGGAAACAGTTCACTTAGCAAGACCCAGGGGCTGTGGCTGATGTaGACGGGGCCACACCAGGGA +
Preference number: 3 (lower is better)
Translates to: RRWAREVFLGNSSLSKTQGLWLM*TGPHQG
Trigger: TCCCTGGTGTGGCCCCGTCAACATCAGCCACAGCCC...CTGGGTCTTGCTAAGTGAACTGTTTCCCAGGAACACCTCTCGGGCCCATCTGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR GCA 72 bp CAGTCACTGCCAAGGCTGCAGTTCCAGGTACCGGGGTaGACCTTAGGAGCCCTGTGGGCTTCTTCAGAAGGC +
Preference number: 3 (lower is better)
Translates to: QSLPRLQFQVPG*TLGALWASSEG
Trigger: GCCTTCTGAAGAAGCCCACAGGGCTCCTAAGGTGCACCCCGGTACCTGGAACTGCAGCCTTGGCAGTGACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR GCA 72 bp TCCTGGGAAACAGTTCACTTAGCAAGACCCAGTACCTaGGCTCCAGAAGCTCAGCGCAGGCCCAGCCTGGGG +
Preference number: 3 (lower is better)
Translates to: SWETVHLARPST*APEAQRRPSLG
Trigger: CCCCAGGCTGGGCCTGCGCTGAGCTTCTGGAGCGCAGGTACTGGGTCTTGCTAAGTGAACTGTTTCCCAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR CCA 72 bp TCCCAGGTCACAGCAGGTCACAGGCAGCCCTGTCTGTaGTGTGAGATCTGCAGACCCACCCAGCAGAGGAGT +
Preference number: 3 (lower is better)
Translates to: SQVTAGHRQPCL*CEICRPTQQRS
Trigger: ACTCCTCTGCTGGGTGGGTCTGCAGATCTCACACCACAGACAGGGCTGCCTGTGACCTGCTGTGACCTGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR CAA 90 bp TTGTGGGAGGTAGACAGGTCTCACTGCATACATGGGACAGATGTGTGCACCCACGGCAGCAGTGGGAGGTaGCTGGCAGCGGCAGGCTGT +
Preference number: 3 (lower is better)
Translates to: LWEVDRSHCIHGTDVCTHGSSGR*LAAAGC
Trigger: ACAGCCTGCCGCTGCCAGCAACCTCCCACTGCTGCC...GTGGGTGCACACATCTGTCCCATGTATGCAGTGAGACCTGTCTACCTCCCACAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR CAA 90 bp TTGTGGGAGGTAGACAGGTCTCACTGCATACATGGGACAGATGTGTGCACCCACGGCAGCCGAGGGGCCTaGAGGTGGCCTGTCCAAGGT +
Preference number: 3 (lower is better)
Translates to: LWEVDRSHCIHGTDVCTHGSRGA*RWPVQG
Trigger: ACCTTGGACAGGCCACCTCAAGGCCCCTCGGCTGCC...GTGGGTGCACACATCTGTCCCATGTATGCAGTGAGACCTGTCTACCTCCCACAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR TCA 72 bp CACACACACACACACACACACACACACACAGCCCTTTaGACCCAGCACTGGCCTGAGGAAGGTGGCCCCGGA +
Preference number: 3 (lower is better)
Translates to: HTHTHTHTHTAL*TQHWPEEGGPG
Trigger: TCCGGGGCCACCTTCCTCAGGCCAGTGCTGGGTTCAAAGGGCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR CAA 90 bp AGGCACGCGAGCCACGGCCACGCTTTATTGCTTAAGACGCACACAGAACACAGACGGAAGAGACGTTCCTaGCAAGGCAGGGCCCCTGCT +
Preference number: 3 (lower is better)
Translates to: RHASHGHALLLKTHTEHRRKRRS*QGRAPA
Trigger: AGCAGGGGCCCTGCCTTGCAAGGAACGTCTCTTCCG...TCTGTGTTCTGTGTGCGTCTTAAGCAATAAAGCGTGGCCGTGGCTCGCGTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR CAA 90 bp AGGCACGCGAGCCACGGCCACGCTTTATTGCTTAAGACGCACACAGAACACAGAAGGCCCAGCCTGGGGTaGGCCCCAGATGGAATATCT +
Preference number: 3 (lower is better)
Translates to: RHASHGHALLLKTHTEHRRPSLG*APDGIS
Trigger: AGATATTCCATCTGGGGCCAACCCCAGGCTGGGCCT...TCTGTGTTCTGTGTGCGTCTTAAGCAATAAAGCGTGGCCGTGGCTCGCGTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR GCA 72 bp GGGCAGCCTTCCTTGATCCACAGCCAACCCTTCTCCTaGTGTCTCTGGCTGTCAGTGAGACCCCTCTGGAAA +
Preference number: 3 (lower is better)
Translates to: GQPSLIHSQPFS*CLWLSVRPLWK
Trigger: TTTCCAGAGGGGTCTCACTGACAGCCAGAGACAGCAGGAGAAGGGTTGGCTGTGGATCAAGGAAGGCTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR CCA 72 bp ACACCAGCAGCCAGTGGCTCCTGGCTTAAGCCAGTCTaGAGAAAGGAGCAGAGGACTCCAGGTGTAGGGACA +
Preference number: 3 (lower is better)
Translates to: TPAASGSWLKPV*RKEQRTPGVGT
Trigger: TGTCCCTACACCTGGAGTCCTCTGCTCCTTTCTCCAGACTGGCTTAAGCCAGGAGCCACTGGCTGCTGGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR CCA 72 bp CCAGCCTCAGACGCAGATGGGCCCGAGAGGTGTTCCTaGGAAACAGTTCACTTAGCAAGACCCAGTACCTGC +
Preference number: 3 (lower is better)
Translates to: PASDADGPERCS*ETVHLARPSTC
Trigger: GCAGGTACTGGGTCTTGCTAAGTGAACTGTTTCCCAGGAACACCTCTCGGGCCCATCTGCGTCTGAGGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR-3UTR CAA 90 bp TTGTGGGAGGTAGACAGGTCTCACTGCATACATGGGACAGATGTGTGCACCCACAGGCCCAGCCTGGGGTaGGCCCCAGATGGAATATCT +
Preference number: 3 (lower is better)
Translates to: LWEVDRSHCIHGTDVCTHRPSLG*APDGIS
Trigger: AGATATTCCATCTGGGGCCAACCCCAGGCTGGGCCT...GTGGGTGCACACATCTGTCCCATGTATGCAGTGAGACCTGTCTACCTCCCACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR GCA 72 bp CAGAGGGCAGGCACGCGAGCCACGGCCACGCTTTATTaGTTAAGACGCACACAGAACACAGAGGAACAAACA +
Preference number: 3 (lower is better)
Translates to: QRAGTRATATLY*LRRTQNTEEQT
Trigger: TGTTTGTTCCTCTGTGTTCTGTGTGCGTCTTAAGCAATAAAGCGTGGCCGTGGCTCGCGTGCCTGCCCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
3UTR GCA 72 bp GTAGACAGGTCTCACTGCATACATGGGACAGATGTGTaGACCCACACACATATACATACACACACACACACA +
Preference number: 3 (lower is better)
Translates to: VDRSHCIHGTDV*THTHIHTHTHT
Trigger: TGTGTGTGTGTGTGTATGTATATGTGTGTGGGTGCACACATCTGTCCCATGTATGCAGTGAGACCTGTCTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR CCA 90 bp GGCAGGCTGTCCCAGGCCCTGGGGCTCCACCTGCTAAGAGAGCTGGGGGAGGTCAGGCAGGGCCCCTGCTaGACAGCACGCCCCCTGGGC +
Preference number: 4 (lower is better)
Translates to: GRLSQALGLHLLRELGEVRQGPC*TARPLG
Trigger: GCCCAGGGGGCGTGCTGTCCAGCAGGGGCCCTGCCT...GACCTCCCCCAGCTCTCTTAGCAGGTGGAGCCCCAGGGCCTGGGACAGCCTGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR TCA 90 bp GCTGTGGCTGATGTTGACGGGGCCACACCAGGGAGAGGGTGGGCACCCTCGGTGCCCGGGCGCCCCACCTaGGCTGCTCATGGTGCCACC +
Preference number: 4 (lower is better)
Translates to: AVADVDGATPGRGWAPSVPGRPT*AAHGAT
Trigger: GGTGGCACCATGAGCAGCTCAGGTGGGGCGCCCGGG...CACCGAGGGTGCCCACCCTCTCCCTGGTGTGGCCCCGTCAACATCAGCCACAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR CCA 90 bp GGCAGGCTGTCCCAGGCCCTGGGGCTCCACCTGCTAAGAGAGCTGGGGGAGGTCGGACAGCACGCCCCCTaGGCGACAGGGTCAGGGACC +
Preference number: 4 (lower is better)
Translates to: GRLSQALGLHLLRELGEVGQHAP*ATGSGT
Trigger: GGTCCCTGACCCTGTCGCCCAGGGGGCGTGCTGTCC...GACCTCCCCCAGCTCTCTTAGCAGGTGGAGCCCCAGGGCCTGGGACAGCCTGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR GCA 90 bp GGCAGGCTGTCCCAGGCCCTGGGGCTCCACCTGCTAAGAGAGCTGGGGGAGGTCTCCGAGCCGGCGCGCTaGCTTGTGGGAGAGGGAGCA +
Preference number: 4 (lower is better)
Translates to: GRLSQALGLHLLRELGEVSEPAR*LVGEGA
Trigger: TGCTCCCTCTCCCACAAGGCAGCGCGCCGGCTCGGA...GACCTCCCCCAGCTCTCTTAGCAGGTGGAGCCCCAGGGCCTGGGACAGCCTGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000291722.11
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000630997.2
CDS-3UTR GCA 90 bp GGCAGGCTGTCCCAGGCCCTGGGGCTCCACCTGCTAAGAGAGCTGGGGGAGGTCGGTGGGCACCCTCGGTaGCAGGGAGAGCCTGCTCTC +
Preference number: 4 (lower is better)
Translates to: GRLSQALGLHLLRELGEVGGHPR*QGEPAL
Trigger: GAGAGCAGGCTCTCCCTGGCACCGAGGGTGCCCACC...GACCTCCCCCAGCTCTCTTAGCAGGTGGAGCCCCAGGGCCTGGGACAGCCTGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR GCA 90 bp CAGGCACCTGCCCGATGGCTGAGAGCCAGCCTCACGGTCAGAGAGGCCAGCGGGGGTGGGCACCCTCGGTaGCAGGGAGAGCCTGCTCTC +
Preference number: 4 (lower is better)
Translates to: QAPARWLRASLTVREASGGGHPR*QGEPAL
Trigger: GAGAGCAGGCTCTCCCTGGCACCGAGGGTGCCCACC...CCCGCTGGCCTCTCTGACCGTGAGGCTGGCTCTCAGCCATCGGGCAGGTGCCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR GCA 90 bp GCTGTGGCTGATGTTGACGGGGCCACACCAGGGAGAGGGTGGGCACCCTCGGTGGCAAGGCAGGGCCCCTaGTGGACAGCACGCCCCCTG +
Preference number: 4 (lower is better)
Translates to: AVADVDGATPGRGWAPSVARQGP*WTARPL
Trigger: CAGGGGGCGTGCTGTCCAGCAGGGGCCCTGCCTTGC...CACCGAGGGTGCCCACCCTCTCCCTGGTGTGGCCCCGTCAACATCAGCCACAGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR GCA 90 bp AGGCTGTCCCAGGCCCTGGGGCTCCACCTGCTAAGAGAGCTGGGGGAGGTCCCTGCAAGGCAGGGCCCCTaGTGGACAGCACGCCCCCTG +
Preference number: 4 (lower is better)
Translates to: RLSQALGLHLLRELGEVPARQGP*WTARPL
Trigger: CAGGGGGCGTGCTGTCCAGCAGGGGCCCTGCCTTGC...AGGGACCTCCCCCAGCTCTCTTAGCAGGTGGAGCCCCAGGGCCTGGGACAGCCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR TCA 90 bp GCCCGCTTCTGCCAAACCCCACCTGGGCTAAGCCAGGCCCGACCAGGCACCTGCGCAGCCGAGGGGCCTTaGGGTGGCCTGTCCAAGGTT +
Preference number: 4 (lower is better)
Translates to: ARFCQTPPGLSQARPGTCAAEGP*GGLSKV
Trigger: AACCTTGGACAGGCCACCTCAAGGCCCCTCGGCTGC...GCAGGTGCCTGGTCGGGCCTGGCTTAGCCCAGGTGGGGTTTGGCAGAAGCGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR TCA 90 bp GGCAGGCTGTCCCAGGCCCTGGGGCTCCACCTGCTAAGAGAGCTGGGGGAGGTCGCCAGCAGGAGCACCTaGGTGGGGCTGAGGTCAGAC +
Preference number: 4 (lower is better)
Translates to: GRLSQALGLHLLRELGEVASRST*VGLRSD
Trigger: GTCTGACCTCAGCCCCACTCAGGTGCTCCTGCTGGC...GACCTCCCCCAGCTCTCTTAGCAGGTGGAGCCCCAGGGCCTGGGACAGCCTGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR TCA 90 bp GCCCGCTTCTGCCAAACCCCACCTGGGCTAAGCCAGGCCCGACCAGGCACCTGCAAGGCAGAAGCTCCCTaGGGGCAGGGCTTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: ARFCQTPPGLSQARPGTCKAEAP*GQGLGR
Trigger: CCTGCCCAAGCCCTGCCCTCAGGGAGCTTCTGCCTT...GCAGGTGCCTGGTCGGGCCTGGCTTAGCCCAGGTGGGGTTTGGCAGAAGCGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR TCA 90 bp GCCCGCTTCTGCCAAACCCCACCTGGGCTAAGCCAGGCCCGACCAGGCACCTGCGCCCCGGAGGAACCCTaGAGGCACATGTCCACCAGG +
Preference number: 4 (lower is better)
Translates to: ARFCQTPPGLSQARPGTCAPEEP*RHMSTR
Trigger: CCTGGTGGACATGTGCCTTCAGGGTTCCTCCGGGGC...GCAGGTGCCTGGTCGGGCCTGGCTTAGCCCAGGTGGGGTTTGGCAGAAGCGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR TCA 90 bp CAGGCACCTGCCCGATGGCTGAGAGCCAGCCTCACGGTCAGAGAGGCCAGCGGGGGAACCTGGGACAGGTaGCACGCCCACTCTCGCCTG +
Preference number: 4 (lower is better)
Translates to: QAPARWLRASLTVREASGGTWDR*HAHSRL
Trigger: CAGGCGAGAGTGGGCGTGTCACCTGTCCCAGGTTCC...CCCGCTGGCCTCTCTGACCGTGAGGCTGGCTCTCAGCCATCGGGCAGGTGCCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR GCA 90 bp GGCAGGCTGTCCCAGGCCCTGGGGCTCCACCTGCTAAGAGAGCTGGGGGAGGTCGCGCCCCACCTGAGCTaGTCATGGTGCCACCGTCAG +
Preference number: 4 (lower is better)
Translates to: GRLSQALGLHLLRELGEVAPHLS*SWCHRQ
Trigger: CTGACGGTGGCACCATGAGCAGCTCAGGTGGGGCGC...GACCTCCCCCAGCTCTCTTAGCAGGTGGAGCCCCAGGGCCTGGGACAGCCTGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR GCA 90 bp GGCAGGCTGTCCCAGGCCCTGGGGCTCCACCTGCTAAGAGAGCTGGGGGAGGTCGGTCCCTCTGCTCAGTaGCCAGGTGGCAGGGTCCCA +
Preference number: 4 (lower is better)
Translates to: GRLSQALGLHLLRELGEVGPSAQ*PGGRVP
Trigger: TGGGACCCTGCCACCTGGGCACTGAGCAGAGGGACC...GACCTCCCCCAGCTCTCTTAGCAGGTGGAGCCCCAGGGCCTGGGACAGCCTGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR GCA 90 bp AGGCTGTCCCAGGCCCTGGGGCTCCACCTGCTAAGAGAGCTGGGGGAGGTCCCTGCCCGACCAGGCACCTaGCCGATGGCTGAGAGCCAG +
Preference number: 4 (lower is better)
Translates to: RLSQALGLHLLRELGEVPARPGT*PMAESQ
Trigger: CTGGCTCTCAGCCATCGGGCAGGTGCCTGGTCGGGC...AGGGACCTCCCCCAGCTCTCTTAGCAGGTGGAGCCCCAGGGCCTGGGACAGCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR GCA 90 bp CAGGCACCTGCCCGATGGCTGAGAGCCAGCCTCACGGTCAGAGAGGCCAGCGGGCCCAGCCCACCAGCCTaGCACTCCTGGCCTCAGATG +
Preference number: 4 (lower is better)
Translates to: QAPARWLRASLTVREASGPSPPA*HSWPQM
Trigger: CATCTGAGGCCAGGAGTGGCAGGCTGGTGGGCTGGG...CCCGCTGGCCTCTCTGACCGTGAGGCTGGCTCTCAGCCATCGGGCAGGTGCCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR GCA 90 bp GGCAGGCTGTCCCAGGCCCTGGGGCTCCACCTGCTAAGAGAGCTGGGGGAGGTCCCCAGCCCACCAGCCTaGCACTCCTGGCCTCAGATG +
Preference number: 4 (lower is better)
Translates to: GRLSQALGLHLLRELGEVPSPPA*HSWPQM
Trigger: CATCTGAGGCCAGGAGTGGCAGGCTGGTGGGCTGGG...GACCTCCCCCAGCTCTCTTAGCAGGTGGAGCCCCAGGGCCTGGGACAGCCTGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR CCA 90 bp GCCCGCTTCTGCCAAACCCCACCTGGGCTAAGCCAGGCCCGACCAGGCACCTGCTGCTCAGTGCCCAGGTaGCAGGGTCCCACTTGCCCC +
Preference number: 4 (lower is better)
Translates to: ARFCQTPPGLSQARPGTCCSVPR*QGPTCP
Trigger: GGGGCAAGTGGGACCCTGCCACCTGGGCACTGAGCA...GCAGGTGCCTGGTCGGGCCTGGCTTAGCCCAGGTGGGGTTTGGCAGAAGCGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR CCA 90 bp CAGGCACCTGCCCGATGGCTGAGAGCCAGCCTCACGGTCAGAGAGGCCAGCGGGCACCCTAGGCAGCAGTaGGAGGTTGCTGGCAGCGGC +
Preference number: 4 (lower is better)
Translates to: QAPARWLRASLTVREASGHPRQQ*EVAGSG
Trigger: GCCGCTGCCAGCAACCTCCCACTGCTGCCTAGGGTG...CCCGCTGGCCTCTCTGACCGTGAGGCTGGCTCTCAGCCATCGGGCAGGTGCCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR CCA 90 bp GCCCGCTTCTGCCAAACCCCACCTGGGCTAAGCCAGGCCCGACCAGGCACCTGCCACCCTAGGCAGCAGTaGGAGGTTGCTGGCAGCGGC +
Preference number: 4 (lower is better)
Translates to: ARFCQTPPGLSQARPGTCHPRQQ*EVAGSG
Trigger: GCCGCTGCCAGCAACCTCCCACTGCTGCCTAGGGTG...GCAGGTGCCTGGTCGGGCCTGGCTTAGCCCAGGTGGGGTTTGGCAGAAGCGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR CCA 90 bp GGCAGGCTGTCCCAGGCCCTGGGGCTCCACCTGCTAAGAGAGCTGGGGGAGGTCTGGCACCCAGGGCAGTaGGGACAGCTCTGTGTGGGG +
Preference number: 4 (lower is better)
Translates to: GRLSQALGLHLLRELGEVWHPGQ*GQLCVG
Trigger: CCCCACACAGAGCTGTCCCCACTGCCCTGGGTGCCA...GACCTCCCCCAGCTCTCTTAGCAGGTGGAGCCCCAGGGCCTGGGACAGCCTGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR CCA 90 bp AGGCTGTCCCAGGCCCTGGGGCTCCACCTGCTAAGAGAGCTGGGGGAGGTCCCTTGGCTCCGGACAGCCTaGCACCCAGGGCAGTGGGGA +
Preference number: 4 (lower is better)
Translates to: RLSQALGLHLLRELGEVPWLRTA*HPGQWG
Trigger: TCCCCACTGCCCTGGGTGCCAGGCTGTCCGGAGCCA...AGGGACCTCCCCCAGCTCTCTTAGCAGGTGGAGCCCCAGGGCCTGGGACAGCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR CCA 90 bp CAGGCACCTGCCCGATGGCTGAGAGCCAGCCTCACGGTCAGAGAGGCCAGCGGGCAGGCACCTGCCCGATaGCTGAGAGCCAGCCTCACG +
Preference number: 4 (lower is better)
Translates to: QAPARWLRASLTVREASGQAPAR*LRASLT
Trigger: CGTGAGGCTGGCTCTCAGCCATCGGGCAGGTGCCTG...CCCGCTGGCCTCTCTGACCGTGAGGCTGGCTCTCAGCCATCGGGCAGGTGCCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR CCA 90 bp CCACCCAGCTGTCCAGTCACTGCCAAGGCTGCAGTTCCAGGTACCGGGGTGCACAGGCAGGGCCCCTGCTaGACAGCACGCCCCCTGGGC +
Preference number: 4 (lower is better)
Translates to: PPSCPVTAKAAVPGTGVHRQGPC*TARPLG
Trigger: GCCCAGGGGGCGTGCTGTCCAGCAGGGGCCCTGCCT...GTGCACCCCGGTACCTGGAACTGCAGCCTTGGCAGTGACTGGACAGCTGGGTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR TCA 90 bp AGGCTGTCCCAGGCCCTGGGGCTCCACCTGCTAAGAGAGCTGGGGGAGGTCCCTGCAGCCGAGGGGCCTTaGGGTGGCCTGTCCAAGGTT +
Preference number: 4 (lower is better)
Translates to: RLSQALGLHLLRELGEVPAAEGP*GGLSKV
Trigger: AACCTTGGACAGGCCACCTCAAGGCCCCTCGGCTGC...AGGGACCTCCCCCAGCTCTCTTAGCAGGTGGAGCCCCAGGGCCTGGGACAGCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR TCA 90 bp GCTGTGGCTGATGTTGACGGGGCCACACCAGGGAGAGGGTGGGCACCCTCGGTGGCCAGCAGGAGCACCTaGGTGGGGCTGAGGTCAGAC +
Preference number: 4 (lower is better)
Translates to: AVADVDGATPGRGWAPSVASRST*VGLRSD
Trigger: GTCTGACCTCAGCCCCACTCAGGTGCTCCTGCTGGC...CACCGAGGGTGCCCACCCTCTCCCTGGTGTGGCCCCGTCAACATCAGCCACAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR TCA 90 bp GCCCGCTTCTGCCAAACCCCACCTGGGCTAAGCCAGGCCCGACCAGGCACCTGCCTCTGTGTGGGGAGGTaGCTGTGGCCTCTGCCCAGT +
Preference number: 4 (lower is better)
Translates to: ARFCQTPPGLSQARPGTCLCVGR*LWPLPS
Trigger: ACTGGGCAGAGGCCACAGTCACCTCCCCACACAGAG...GCAGGTGCCTGGTCGGGCCTGGCTTAGCCCAGGTGGGGTTTGGCAGAAGCGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR TCA 90 bp AGGCTGTCCCAGGCCCTGGGGCTCCACCTGCTAAGAGAGCTGGGGGAGGTCCCTCACCTGCCCGATGGCTaGGAGCCAGCCTCACGGTCA +
Preference number: 4 (lower is better)
Translates to: RLSQALGLHLLRELGEVPHLPDG*EPASRS
Trigger: TGACCGTGAGGCTGGCTCTCAGCCATCGGGCAGGTG...AGGGACCTCCCCCAGCTCTCTTAGCAGGTGGAGCCCCAGGGCCTGGGACAGCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR TCA 90 bp GCTGTGGCTGATGTTGACGGGGCCACACCAGGGAGAGGGTGGGCACCCTCGGTGCACCTGCCCGATGGCTaGGAGCCAGCCTCACGGTCA +
Preference number: 4 (lower is better)
Translates to: AVADVDGATPGRGWAPSVHLPDG*EPASRS
Trigger: TGACCGTGAGGCTGGCTCTCAGCCATCGGGCAGGTG...CACCGAGGGTGCCCACCCTCTCCCTGGTGTGGCCCCGTCAACATCAGCCACAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR TCA 90 bp AGGCTGTCCCAGGCCCTGGGGCTCCACCTGCTAAGAGAGCTGGGGGAGGTCCCTGCCCCGGAGGAACCCTaGAGGCACATGTCCACCAGG +
Preference number: 4 (lower is better)
Translates to: RLSQALGLHLLRELGEVPAPEEP*RHMSTR
Trigger: CCTGGTGGACATGTGCCTTCAGGGTTCCTCCGGGGC...AGGGACCTCCCCCAGCTCTCTTAGCAGGTGGAGCCCCAGGGCCTGGGACAGCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR TCA 90 bp GCTGTGGCTGATGTTGACGGGGCCACACCAGGGAGAGGGTGGGCACCCTCGGTGGGAACCTGGGACAGGTaGCACGCCCACTCTCGCCTG +
Preference number: 4 (lower is better)
Translates to: AVADVDGATPGRGWAPSVGTWDR*HAHSRL
Trigger: CAGGCGAGAGTGGGCGTGTCACCTGTCCCAGGTTCC...CACCGAGGGTGCCCACCCTCTCCCTGGTGTGGCCCCGTCAACATCAGCCACAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR GCA 90 bp CAGGCACCTGCCCGATGGCTGAGAGCCAGCCTCACGGTCAGAGAGGCCAGCGGGCTGAGCTGCTCATGGTaGCACCGTCAGGCGCAGCTC +
Preference number: 4 (lower is better)
Translates to: QAPARWLRASLTVREASGLSCSW*HRQAQL
Trigger: GAGCTGCGCCTGACGGTGGCACCATGAGCAGCTCAG...CCCGCTGGCCTCTCTGACCGTGAGGCTGGCTCTCAGCCATCGGGCAGGTGCCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR GCA 90 bp GGCAGGCTGTCCCAGGCCCTGGGGCTCCACCTGCTAAGAGAGCTGGGGGAGGTCCAAAGGCGATGGCGTTaGCCAGCAGCGTGGTCAGGG +
Preference number: 4 (lower is better)
Translates to: GRLSQALGLHLLRELGEVQRRWR*PAAWSG
Trigger: CCCTGACCACGCTGCTGGGCAACGCCATCGCCTTTG...GACCTCCCCCAGCTCTCTTAGCAGGTGGAGCCCCAGGGCCTGGGACAGCCTGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR GCA 90 bp GCCCGCTTCTGCCAAACCCCACCTGGGCTAAGCCAGGCCCGACCAGGCACCTGCCCCCTCTCCAGGCTGTaGCTCAGCGTGGACAGTCCA +
Preference number: 4 (lower is better)
Translates to: ARFCQTPPGLSQARPGTCPLSRL*LSVDSP
Trigger: TGGACTGTCCACGCTGAGGCACAGCCTGGAGAGGGG...GCAGGTGCCTGGTCGGGCCTGGCTTAGCCCAGGTGGGGTTTGGCAGAAGCGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR GCA 90 bp GCTGTGGCTGATGTTGACGGGGCCACACCAGGGAGAGGGTGGGCACCCTCGGTGTGGGGGAGGTCCCTCTaGTCAGTGCCCAGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: AVADVDGATPGRGWAPSVWGRSL*SVPRWQ
Trigger: CTGCCACCTGGGCACTGAGCAGAGGGACCTCCCCCA...CACCGAGGGTGCCCACCCTCTCCCTGGTGTGGCCCCGTCAACATCAGCCACAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR GCA 90 bp GCTGTGGCTGATGTTGACGGGGCCACACCAGGGAGAGGGTGGGCACCCTCGGTGGCAGCAGTGGGAGGTTaGTGGCAGCGGCAGGCTGTC +
Preference number: 4 (lower is better)
Translates to: AVADVDGATPGRGWAPSVAAVGG*WQRQAV
Trigger: GACAGCCTGCCGCTGCCAGCAACCTCCCACTGCTGC...CACCGAGGGTGCCCACCCTCTCCCTGGTGTGGCCCCGTCAACATCAGCCACAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR GCA 90 bp GCTGTGGCTGATGTTGACGGGGCCACACCAGGGAGAGGGTGGGCACCCTCGGTGGGTGACAGTGGGCGCTaGACCCTAGGCAGCAGTGGG +
Preference number: 4 (lower is better)
Translates to: AVADVDGATPGRGWAPSVGDSGR*TLGSSG
Trigger: CCCACTGCTGCCTAGGGTGCAGCGCCCACTGTCACC...CACCGAGGGTGCCCACCCTCTCCCTGGTGTGGCCCCGTCAACATCAGCCACAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR GCA 90 bp GGCAGGCTGTCCCAGGCCCTGGGGCTCCACCTGCTAAGAGAGCTGGGGGAGGTCACACCCGCCCGCTTCTaGCAAACCCCACCTGGGCTA +
Preference number: 4 (lower is better)
Translates to: GRLSQALGLHLLRELGEVTPARF*QTPPGL
Trigger: TAGCCCAGGTGGGGTTTGGCAGAAGCGGGCGGGTGT...GACCTCCCCCAGCTCTCTTAGCAGGTGGAGCCCCAGGGCCTGGGACAGCCTGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR GCA 90 bp GCTGTGGCTGATGTTGACGGGGCCACACCAGGGAGAGGGTGGGCACCCTCGGTGCCCAGCCCACCAGCCTaGCACTCCTGGCCTCAGATG +
Preference number: 4 (lower is better)
Translates to: AVADVDGATPGRGWAPSVPSPPA*HSWPQM
Trigger: CATCTGAGGCCAGGAGTGGCAGGCTGGTGGGCTGGG...CACCGAGGGTGCCCACCCTCTCCCTGGTGTGGCCCCGTCAACATCAGCCACAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR GCA 90 bp AGGCTGTCCCAGGCCCTGGGGCTCCACCTGCTAAGAGAGCTGGGGGAGGTCCCTCCCAGCCCACCAGCCTaGCACTCCTGGCCTCAGATG +
Preference number: 4 (lower is better)
Translates to: RLSQALGLHLLRELGEVPPSPPA*HSWPQM
Trigger: CATCTGAGGCCAGGAGTGGCAGGCTGGTGGGCTGGG...AGGGACCTCCCCCAGCTCTCTTAGCAGGTGGAGCCCCAGGGCCTGGGACAGCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR CCA 90 bp GCCCGCTTCTGCCAAACCCCACCTGGGCTAAGCCAGGCCCGACCAGGCACCTGCCACCTGAGCTGCTCATaGTGCCACCGTCAGGCGCAG +
Preference number: 4 (lower is better)
Translates to: ARFCQTPPGLSQARPGTCHLSCS*CHRQAQ
Trigger: CTGCGCCTGACGGTGGCACCATGAGCAGCTCAGGTG...GCAGGTGCCTGGTCGGGCCTGGCTTAGCCCAGGTGGGGTTTGGCAGAAGCGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR CCA 90 bp CAGGCACCTGCCCGATGGCTGAGAGCCAGCCTCACGGTCAGAGAGGCCAGCGGGTCTCTGCATCCTCCCTaGGTAGGCCTGGCTCCGGAC +
Preference number: 4 (lower is better)
Translates to: QAPARWLRASLTVREASGSLHPP*VGLAPD
Trigger: GTCCGGAGCCAGGCCTACCCAGGGAGGATGCAGAGA...CCCGCTGGCCTCTCTGACCGTGAGGCTGGCTCTCAGCCATCGGGCAGGTGCCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR CCA 90 bp AGGCTGTCCCAGGCCCTGGGGCTCCACCTGCTAAGAGAGCTGGGGGAGGTCCCTCAGGCACCTGCCCGATaGCTGAGAGCCAGCCTCACG +
Preference number: 4 (lower is better)
Translates to: RLSQALGLHLLRELGEVPQAPAR*LRASLT
Trigger: CGTGAGGCTGGCTCTCAGCCATCGGGCAGGTGCCTG...AGGGACCTCCCCCAGCTCTCTTAGCAGGTGGAGCCCCAGGGCCTGGGACAGCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR CCA 90 bp GCCACTCCCAGCCTCAGACGCAGATGGGCCCGAGAGGTGTTCCTGGGAAACAGTAGGCAGGGCCCCTGCTaGACAGCACGCCCCCTGGGC +
Preference number: 4 (lower is better)
Translates to: ATPSLRRRWAREVFLGNSRQGPC*TARPLG
Trigger: GCCCAGGGGGCGTGCTGTCCAGCAGGGGCCCTGCCT...ACTGTTTCCCAGGAACACCTCTCGGGCCCATCTGCGTCTGAGGCTGGGAGTGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR TCA 90 bp GCAGTTCCAGGTACCGGGGTGCACCTTAGGAGCCCTGTGGGCTTCTTCAGAAGGCCCGGGCGCCCCACCTaGGCTGCTCATGGTGCCACC +
Preference number: 4 (lower is better)
Translates to: AVPGTGVHLRSPVGFFRRPGRPT*AAHGAT
Trigger: GGTGGCACCATGAGCAGCTCAGGTGGGGCGCCCGGG...CCTTCTGAAGAAGCCCACAGGGCTCCTAAGGTGCACCCCGGTACCTGGAACTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR TCA 90 bp GGGTTGGCCCCAGATGGAATATCTTCCACACCCGCCCGCTTCTGCCAAACCCCACCCGGGCGCCCCACCTaGGCTGCTCATGGTGCCACC +
Preference number: 4 (lower is better)
Translates to: GLAPDGISSTPARFCQTPPGRPT*AAHGAT
Trigger: GGTGGCACCATGAGCAGCTCAGGTGGGGCGCCCGGG...TGGGGTTTGGCAGAAGCGGGCGGGTGTGGAAGATATTCCATCTGGGGCCAACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR TCA 90 bp GGCAGGCTGTCCCAGGCCCTGGGGCTCCACCTGCTAAGAGAGCTGGGGGAGGTCGCCCTGTCTGTGGTGTaGGATCTGCAGACCCACCCA +
Preference number: 4 (lower is better)
Translates to: GRLSQALGLHLLRELGEVALSVV*DLQTHP
Trigger: TGGGTGGGTCTGCAGATCTCACACCACAGACAGGGC...GACCTCCCCCAGCTCTCTTAGCAGGTGGAGCCCCAGGGCCTGGGACAGCCTGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR TCA 90 bp GCTGTGGCTGATGTTGACGGGGCCACACCAGGGAGAGGGTGGGCACCCTCGGTGCTTCAGAAGGCAGGGTaGCAGTGGGCGCTGCACCCT +
Preference number: 4 (lower is better)
Translates to: AVADVDGATPGRGWAPSVLQKAG*QWALHP
Trigger: AGGGTGCAGCGCCCACTGTCACCCTGCCTTCTGAAG...CACCGAGGGTGCCCACCCTCTCCCTGGTGTGGCCCCGTCAACATCAGCCACAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR TCA 90 bp GCCCGCTTCTGCCAAACCCCACCTGGGCTAAGCCAGGCCCGACCAGGCACCTGCGTCTCTGGCTGTCAGTaGGACCCCTCTGGAAAGGGC +
Preference number: 4 (lower is better)
Translates to: ARFCQTPPGLSQARPGTCVSGCQ*DPSGKG
Trigger: GCCCTTTCCAGAGGGGTCTCACTGACAGCCAGAGAC...GCAGGTGCCTGGTCGGGCCTGGCTTAGCCCAGGTGGGGTTTGGCAGAAGCGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR TCA 90 bp GCCCGCTTCTGCCAAACCCCACCTGGGCTAAGCCAGGCCCGACCAGGCACCTGCCTGTCTTGTCCCCTCTaGGAATGGCCCAGGCTCCCT +
Preference number: 4 (lower is better)
Translates to: ARFCQTPPGLSQARPGTCLSCPL*EWPRLP
Trigger: AGGGAGCCTGGGCCATTCTCAGAGGGGACAAGACAG...GCAGGTGCCTGGTCGGGCCTGGCTTAGCCCAGGTGGGGTTTGGCAGAAGCGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000540581.5
ENST00000542192.5
ENST00000627083.2
ENST00000630997.2
CDS-3UTR GCA 90 bp GGCCCAGCCTGGGGTTGGCCCCAGATGGAATATCTTCCACACCCGCCCGCTTCTGTCATGCCCTCTTCCTaGGCGGGCGGCGCAGAGCTG +
Preference number: 4 (lower is better)
Translates to: GPAWGWPQMEYLPHPPASVMPSS*AGGAEL
Trigger: CAGCTCTGCGCCGCCCGCGCAGGAAGAGGGCATGAC...AGAAGCGGGCGGGTGTGGAAGATATTCCATCTGGGGCCAACCCCAGGCTGGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR GCA 90 bp GCCCGCTTCTGCCAAACCCCACCTGGGCTAAGCCAGGCCCGACCAGGCACCTGCAGGTGTAGGGACACGTaGAAAGGCCCCTCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: ARFCQTPPGLSQARPGTCRCRDT*KGPSPG
Trigger: GCCTGGAGAGGGGCCTTTGCACGTGTCCCTACACCT...GCAGGTGCCTGGTCGGGCCTGGCTTAGCCCAGGTGGGGTTTGGCAGAAGCGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR GCA 90 bp GGCAGGCTGTCCCAGGCCCTGGGGCTCCACCTGCTAAGAGAGCTGGGGGAGGTCAGGTGTAGGGACACGTaGAAAGGCCCCTCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: GRLSQALGLHLLRELGEVRCRDT*KGPSPG
Trigger: GCCTGGAGAGGGGCCTTTGCACGTGTCCCTACACCT...GACCTCCCCCAGCTCTCTTAGCAGGTGGAGCCCCAGGGCCTGGGACAGCCTGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR GCA 90 bp CAGGCACCTGCCCGATGGCTGAGAGCCAGCCTCACGGTCAGAGAGGCCAGCGGGAGCTGCTGCAGGCTCTaGCTCAAGTCCAGCAGCCCA +
Preference number: 4 (lower is better)
Translates to: QAPARWLRASLTVREASGSCCRL*LKSSSP
Trigger: TGGGCTGCTGGACTTGAGGCAGAGCCTGCAGCAGCT...CCCGCTGGCCTCTCTGACCGTGAGGCTGGCTCTCAGCCATCGGGCAGGTGCCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR GCA 90 bp CAGGCACCTGCCCGATGGCTGAGAGCCAGCCTCACGGTCAGAGAGGCCAGCGGGGTGCCAGGGAGAGCCTaGTCTCCCCACTTCCTTAGC +
Preference number: 4 (lower is better)
Translates to: QAPARWLRASLTVREASGVPGRA*SPHFLS
Trigger: GCTAAGGAAGTGGGGAGAGCAGGCTCTCCCTGGCAC...CCCGCTGGCCTCTCTGACCGTGAGGCTGGCTCTCAGCCATCGGGCAGGTGCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR GCA 90 bp GCTGTGGCTGATGTTGACGGGGCCACACCAGGGAGAGGGTGGGCACCCTCGGTGACACCCGCCCGCTTCTaGCAAACCCCACCTGGGCTA +
Preference number: 4 (lower is better)
Translates to: AVADVDGATPGRGWAPSVTPARF*QTPPGL
Trigger: TAGCCCAGGTGGGGTTTGGCAGAAGCGGGCGGGTGT...CACCGAGGGTGCCCACCCTCTCCCTGGTGTGGCCCCGTCAACATCAGCCACAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR GCA 90 bp AGGCTGTCCCAGGCCCTGGGGCTCCACCTGCTAAGAGAGCTGGGGGAGGTCCCTACACCCGCCCGCTTCTaGCAAACCCCACCTGGGCTA +
Preference number: 4 (lower is better)
Translates to: RLSQALGLHLLRELGEVPTPARF*QTPPGL
Trigger: TAGCCCAGGTGGGGTTTGGCAGAAGCGGGCGGGTGT...AGGGACCTCCCCCAGCTCTCTTAGCAGGTGGAGCCCCAGGGCCTGGGACAGCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR GCA 90 bp GCCCGCTTCTGCCAAACCCCACCTGGGCTAAGCCAGGCCCGACCAGGCACCTGCACTCCTGGCCTCAGATaGCACTCCCGGCCTCAGATG +
Preference number: 4 (lower is better)
Translates to: ARFCQTPPGLSQARPGTCTPGLR*HSRPQM
Trigger: CATCTGAGGCCGGGAGTGGCATCTGAGGCCAGGAGT...GCAGGTGCCTGGTCGGGCCTGGCTTAGCCCAGGTGGGGTTTGGCAGAAGCGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR GCA 90 bp CAGGCACCTGCCCGATGGCTGAGAGCCAGCCTCACGGTCAGAGAGGCCAGCGGGACTCCTGGCCTCAGATaGCACTCCCGGCCTCAGATG +
Preference number: 4 (lower is better)
Translates to: QAPARWLRASLTVREASGTPGLR*HSRPQM
Trigger: CATCTGAGGCCGGGAGTGGCATCTGAGGCCAGGAGT...CCCGCTGGCCTCTCTGACCGTGAGGCTGGCTCTCAGCCATCGGGCAGGTGCCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR GCA 90 bp GGCAGGCTGTCCCAGGCCCTGGGGCTCCACCTGCTAAGAGAGCTGGGGGAGGTCAGGGCCTTCCACCTCTaGATCCAGCCATGCACCCAC +
Preference number: 4 (lower is better)
Translates to: GRLSQALGLHLLRELGEVRAFHL*IQPCTH
Trigger: GTGGGTGCATGGCTGGATGCAGAGGTGGAAGGCCCT...GACCTCCCCCAGCTCTCTTAGCAGGTGGAGCCCCAGGGCCTGGGACAGCCTGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR GCA 90 bp GGCAGGCTGTCCCAGGCCCTGGGGCTCCACCTGCTAAGAGAGCTGGGGGAGGTCCAGGGACCCCAGGACTaGACAGCTGCAGACTTGCTG +
Preference number: 4 (lower is better)
Translates to: GRLSQALGLHLLRELGEVQGPQD*TAADLL
Trigger: CAGCAAGTCTGCAGCTGTGCAGTCCTGGGGTCCCTG...GACCTCCCCCAGCTCTCTTAGCAGGTGGAGCCCCAGGGCCTGGGACAGCCTGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR GCA 90 bp GCCCGCTTCTGCCAAACCCCACCTGGGCTAAGCCAGGCCCGACCAGGCACCTGCCAGGGACCCCAGGACTaGACAGCTGCAGACTTGCTG +
Preference number: 4 (lower is better)
Translates to: ARFCQTPPGLSQARPGTCQGPQD*TAADLL
Trigger: CAGCAAGTCTGCAGCTGTGCAGTCCTGGGGTCCCTG...GCAGGTGCCTGGTCGGGCCTGGCTTAGCCCAGGTGGGGTTTGGCAGAAGCGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR GCA 90 bp GGGGTTGGCCCCAGATGGAATATCTTCCACACCCGCCCGCTTCTGCCAAACCCCGCAAGGCAGGGCCCCTaGTGGACAGCACGCCCCCTG +
Preference number: 4 (lower is better)
Translates to: GVGPRWNIFHTRPLLPNPARQGP*WTARPL
Trigger: CAGGGGGCGTGCTGTCCAGCAGGGGCCCTGCCTTGC...GGGGTTTGGCAGAAGCGGGCGGGTGTGGAAGATATTCCATCTGGGGCCAACCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR CCA 90 bp GGCAGGCTGTCCCAGGCCCTGGGGCTCCACCTGCTAAGAGAGCTGGGGGAGGTCCGGCGCGCTGCCTTGTaGGAGAGGGAGCATATTAGC +
Preference number: 4 (lower is better)
Translates to: GRLSQALGLHLLRELGEVRRAAL*EREHIS
Trigger: GCTAATATGCTCCCTCTCCCACAAGGCAGCGCGCCG...GACCTCCCCCAGCTCTCTTAGCAGGTGGAGCCCCAGGGCCTGGGACAGCCTGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000291722.11
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000630997.2
CDS-3UTR CCA 90 bp AGGCTGTCCCAGGCCCTGGGGCTCCACCTGCTAAGAGAGCTGGGGGAGGTCCCTCACCTGAGCTGCTCATaGTGCCACCGTCAGGCGCAG +
Preference number: 4 (lower is better)
Translates to: RLSQALGLHLLRELGEVPHLSCS*CHRQAQ
Trigger: CTGCGCCTGACGGTGGCACCATGAGCAGCTCAGGTG...AGGGACCTCCCCCAGCTCTCTTAGCAGGTGGAGCCCCAGGGCCTGGGACAGCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR CCA 90 bp GCTGTGGCTGATGTTGACGGGGCCACACCAGGGAGAGGGTGGGCACCCTCGGTGCGAGGGGCCTTGAGGTaGCCTGTCCAAGGTTCCCAG +
Preference number: 4 (lower is better)
Translates to: AVADVDGATPGRGWAPSVRGALR*PVQGSQ
Trigger: CTGGGAACCTTGGACAGGCCACCTCAAGGCCCCTCG...CACCGAGGGTGCCCACCCTCTCCCTGGTGTGGCCCCGTCAACATCAGCCACAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR CCA 90 bp CCACCCAGCTGTCCAGTCACTGCCAAGGCTGCAGTTCCAGGTACCGGGGTGCACTGGCTCCGGACAGCCTaGCACCCAGGGCAGTGGGGA +
Preference number: 4 (lower is better)
Translates to: PPSCPVTAKAAVPGTGVHWLRTA*HPGQWG
Trigger: TCCCCACTGCCCTGGGTGCCAGGCTGTCCGGAGCCA...GTGCACCCCGGTACCTGGAACTGCAGCCTTGGCAGTGACTGGACAGCTGGGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR CCA 90 bp GCCCGCTTCTGCCAAACCCCACCTGGGCTAAGCCAGGCCCGACCAGGCACCTGCTGGGGGTGCACATCCTaGGCACCAGCTCTCTGCATC +
Preference number: 4 (lower is better)
Translates to: ARFCQTPPGLSQARPGTCWGCTS*APALCI
Trigger: GATGCAGAGAGCTGGTGCCCAGGATGTGCACCCCCA...GCAGGTGCCTGGTCGGGCCTGGCTTAGCCCAGGTGGGGTTTGGCAGAAGCGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR CCA 90 bp CAGGCACCTGCCCGATGGCTGAGAGCCAGCCTCACGGTCAGAGAGGCCAGCGGGTGGGGGTGCACATCCTaGGCACCAGCTCTCTGCATC +
Preference number: 4 (lower is better)
Translates to: QAPARWLRASLTVREASGWGCTS*APALCI
Trigger: GATGCAGAGAGCTGGTGCCCAGGATGTGCACCCCCA...CCCGCTGGCCTCTCTGACCGTGAGGCTGGCTCTCAGCCATCGGGCAGGTGCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR CCA 90 bp GGCAGGCTGTCCCAGGCCCTGGGGCTCCACCTGCTAAGAGAGCTGGGGGAGGTCAGCCTCAGACGCAGATaGGCCCGAGAGGTGTTCCTG +
Preference number: 4 (lower is better)
Translates to: GRLSQALGLHLLRELGEVSLRRR*AREVFL
Trigger: CAGGAACACCTCTCGGGCCCATCTGCGTCTGAGGCT...GACCTCCCCCAGCTCTCTTAGCAGGTGGAGCCCCAGGGCCTGGGACAGCCTGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR CCA 90 bp CAGGCACCTGCCCGATGGCTGAGAGCCAGCCTCACGGTCAGAGAGGCCAGCGGGAGCCTCAGACGCAGATaGGCCCGAGAGGTGTTCCTG +
Preference number: 4 (lower is better)
Translates to: QAPARWLRASLTVREASGSLRRR*AREVFL
Trigger: CAGGAACACCTCTCGGGCCCATCTGCGTCTGAGGCT...CCCGCTGGCCTCTCTGACCGTGAGGCTGGCTCTCAGCCATCGGGCAGGTGCCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR CCA 90 bp AGGCTGTCCCAGGCCCTGGGGCTCCACCTGCTAAGAGAGCTGGGGGAGGTCCCTCCAGACTCCCAGGGGTaGGATGCTGCTGACCCAGGA +
Preference number: 4 (lower is better)
Translates to: RLSQALGLHLLRELGEVPPDSQG*DAADPG
Trigger: TCCTGGGTCAGCAGCATCCCACCCCTGGGAGTCTGG...AGGGACCTCCCCCAGCTCTCTTAGCAGGTGGAGCCCCAGGGCCTGGGACAGCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR CCA 90 bp GGCCCAGCCTGGGGTTGGCCCCAGATGGAATATCTTCCACACCCGCCCGCTTCTACCCTGGGGCTCAGCTaGCCAGACTCCCAGGGGTGG +
Preference number: 4 (lower is better)
Translates to: GPAWGWPQMEYLPHPPASTLGLS*PDSQGW
Trigger: CCACCCCTGGGAGTCTGGCCAGCTGAGCCCCAGGGT...AGAAGCGGGCGGGTGTGGAAGATATTCCATCTGGGGCCAACCCCAGGCTGGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR CCA 90 bp GGCTGTGCCTCAGCGTGGACAGTCCAGGCCTCACTTGGACCCACACAGAGCCAGACCCTGGGGCTCAGCTaGCCAGACTCCCAGGGGTGG +
Preference number: 4 (lower is better)
Translates to: GCASAWTVQASLGPTQSQTLGLS*PDSQGW
Trigger: CCACCCCTGGGAGTCTGGCCAGCTGAGCCCCAGGGT...CTGGCTCTGTGTGGGTCCAAGTGAGGCCTGGACTGTCCACGCTGAGGCACAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000625979.2
ENST00000629431.2
CDS-3UTR CCA 90 bp GGGGTTGGCCCCAGATGGAATATCTTCCACACCCGCCCGCTTCTGCCAAACCCCGGACAGCACGCCCCCTaGGCGACAGGGTCAGGGACC +
Preference number: 4 (lower is better)
Translates to: GVGPRWNIFHTRPLLPNPGQHAP*ATGSGT
Trigger: GGTCCCTGACCCTGTCGCCCAGGGGGCGTGCTGTCC...GGGGTTTGGCAGAAGCGGGCGGGTGTGGAAGATATTCCATCTGGGGCCAACCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR CCA 90 bp GTCACTGCCAAGGCTGCAGTTCCAGGTACCGGGGTGCACCTTAGGAGCCCTGTGGGACAGCACGCCCCCTaGGCGACAGGGTCAGGGACC +
Preference number: 4 (lower is better)
Translates to: VTAKAAVPGTGVHLRSPVGQHAP*ATGSGT
Trigger: GGTCCCTGACCCTGTCGCCCAGGGGGCGTGCTGTCC...CACAGGGCTCCTAAGGTGCACCCCGGTACCTGGAACTGCAGCCTTGGCAGTGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR CCA 90 bp AGGCAGCCCTGTCTGTGGTGTGAGATCTGCAGACCCACCCAGCAGAGGAGTAGGAGGCAGGGCCCCTGCTaGACAGCACGCCCCCTGGGC +
Preference number: 4 (lower is better)
Translates to: RQPCLWCEICRPTQQRSRRQGPC*TARPLG
Trigger: GCCCAGGGGGCGTGCTGTCCAGCAGGGGCCCTGCCT...CCTACTCCTCTGCTGGGTGGGTCTGCAGATCTCACACCACAGACAGGGCTGCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR TCA 90 bp AGGCTGTCCCAGGCCCTGGGGCTCCACCTGCTAAGAGAGCTGGGGGAGGTCCCTGCCCTGTCTGTGGTGTaGGATCTGCAGACCCACCCA +
Preference number: 4 (lower is better)
Translates to: RLSQALGLHLLRELGEVPALSVV*DLQTHP
Trigger: TGGGTGGGTCTGCAGATCTCACACCACAGACAGGGC...AGGGACCTCCCCCAGCTCTCTTAGCAGGTGGAGCCCCAGGGCCTGGGACAGCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR TCA 90 bp CCACCCAGCTGTCCAGTCACTGCCAAGGCTGCAGTTCCAGGTACCGGGGTGCACGCCAGCAGGAGCACCTaGGTGGGGCTGAGGTCAGAC +
Preference number: 4 (lower is better)
Translates to: PPSCPVTAKAAVPGTGVHASRST*VGLRSD
Trigger: GTCTGACCTCAGCCCCACTCAGGTGCTCCTGCTGGC...GTGCACCCCGGTACCTGGAACTGCAGCCTTGGCAGTGACTGGACAGCTGGGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR TCA 90 bp GGCCCAGCCTGGGGTTGGCCCCAGATGGAATATCTTCCACACCCGCCCGCTTCTAAGGCAGAAGCTCCCTaGGGGCAGGGCTTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: GPAWGWPQMEYLPHPPASKAEAP*GQGLGR
Trigger: CCTGCCCAAGCCCTGCCCTCAGGGAGCTTCTGCCTT...AGAAGCGGGCGGGTGTGGAAGATATTCCATCTGGGGCCAACCCCAGGCTGGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR TCA 90 bp GGCCCAGCCTGGGGTTGGCCCCAGATGGAATATCTTCCACACCCGCCCGCTTCTGCCCCGGAGGAACCCTaGAGGCACATGTCCACCAGG +
Preference number: 4 (lower is better)
Translates to: GPAWGWPQMEYLPHPPASAPEEP*RHMSTR
Trigger: CCTGGTGGACATGTGCCTTCAGGGTTCCTCCGGGGC...AGAAGCGGGCGGGTGTGGAAGATATTCCATCTGGGGCCAACCCCAGGCTGGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR TCA 90 bp CAGGCACCTGCCCGATGGCTGAGAGCCAGCCTCACGGTCAGAGAGGCCAGCGGGACACACACAGCCCTTTaGACCCAGCACTGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: QAPARWLRASLTVREASGTHTAL*TQHWPE
Trigger: CTCAGGCCAGTGCTGGGTTCAAAGGGCTGTGTGTGT...CCCGCTGGCCTCTCTGACCGTGAGGCTGGCTCTCAGCCATCGGGCAGGTGCCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR TCA 90 bp GCTGTGGCTGATGTTGACGGGGCCACACCAGGGAGAGGGTGGGCACCCTCGGTGGTCTCTGGCTGTCAGTaGGACCCCTCTGGAAAGGGC +
Preference number: 4 (lower is better)
Translates to: AVADVDGATPGRGWAPSVVSGCQ*DPSGKG
Trigger: GCCCTTTCCAGAGGGGTCTCACTGACAGCCAGAGAC...CACCGAGGGTGCCCACCCTCTCCCTGGTGTGGCCCCGTCAACATCAGCCACAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR TCA 90 bp AGGCTGTCCCAGGCCCTGGGGCTCCACCTGCTAAGAGAGCTGGGGGAGGTCCCTGTCTCTGGCTGTCAGTaGGACCCCTCTGGAAAGGGC +
Preference number: 4 (lower is better)
Translates to: RLSQALGLHLLRELGEVPVSGCQ*DPSGKG
Trigger: GCCCTTTCCAGAGGGGTCTCACTGACAGCCAGAGAC...AGGGACCTCCCCCAGCTCTCTTAGCAGGTGGAGCCCCAGGGCCTGGGACAGCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR GCA 90 bp GGCCCAGCCTGGGGTTGGCCCCAGATGGAATATCTTCCACACCCGCCCGCTTCTGCGCCCCACCTGAGCTaGTCATGGTGCCACCGTCAG +
Preference number: 4 (lower is better)
Translates to: GPAWGWPQMEYLPHPPASAPHLS*SWCHRQ
Trigger: CTGACGGTGGCACCATGAGCAGCTCAGGTGGGGCGC...AGAAGCGGGCGGGTGTGGAAGATATTCCATCTGGGGCCAACCCCAGGCTGGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR GCA 90 bp CCACCCAGCTGTCCAGTCACTGCCAAGGCTGCAGTTCCAGGTACCGGGGTGCACGCGCCCCACCTGAGCTaGTCATGGTGCCACCGTCAG +
Preference number: 4 (lower is better)
Translates to: PPSCPVTAKAAVPGTGVHAPHLS*SWCHRQ
Trigger: CTGACGGTGGCACCATGAGCAGCTCAGGTGGGGCGC...GTGCACCCCGGTACCTGGAACTGCAGCCTTGGCAGTGACTGGACAGCTGGGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR GCA 90 bp CGTGGACAGTCCAGGCCTCACTTGGACCCACACAGAGCCAGAAGAGGGGACAGGGTCATGCCCTCTTCCTaGGCGGGCGGCGCAGAGCTG +
Preference number: 4 (lower is better)
Translates to: RGQSRPHLDPHRARRGDRVMPSS*AGGAEL
Trigger: CAGCTCTGCGCCGCCCGCGCAGGAAGAGGGCATGAC...CCTGTCCCCTCTTCTGGCTCTGTGTGGGTCCAAGTGAGGCCTGGACTGTCCACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000625979.2
ENST00000629431.2
CDS-3UTR GCA 90 bp GTCACTGCCAAGGCTGCAGTTCCAGGTACCGGGGTGCACCTTAGGAGCCCTGTGGTCATGCCCTCTTCCTaGGCGGGCGGCGCAGAGCTG +
Preference number: 4 (lower is better)
Translates to: VTAKAAVPGTGVHLRSPVVMPSS*AGGAEL
Trigger: CAGCTCTGCGCCGCCCGCGCAGGAAGAGGGCATGAC...CACAGGGCTCCTAAGGTGCACCCCGGTACCTGGAACTGCAGCCTTGGCAGTGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR GCA 90 bp CCACCCAGCTGTCCAGTCACTGCCAAGGCTGCAGTTCCAGGTACCGGGGTGCACGGTACCACCACGTCATaGCCTCTTCCTGCGCGGGCG +
Preference number: 4 (lower is better)
Translates to: PPSCPVTAKAAVPGTGVHGTTTS*PLPARA
Trigger: CGCCCGCGCAGGAAGAGGGCATGACGTGGTGGTACC...GTGCACCCCGGTACCTGGAACTGCAGCCTTGGCAGTGACTGGACAGCTGGGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR GCA 90 bp CTGCCAAGGCTGCAGTTCCAGGTACCGGGGTGCACCTTAGGAGCCCTGTGGGCTGGTACCACCACGTCATaGCCTCTTCCTGCGCGGGCG +
Preference number: 4 (lower is better)
Translates to: LPRLQFQVPGCTLGALWAGTTTS*PLPARA
Trigger: CGCCCGCGCAGGAAGAGGGCATGACGTGGTGGTACC...AGCCCACAGGGCTCCTAAGGTGCACCCCGGTACCTGGAACTGCAGCCTTGGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR GCA 90 bp AGGCTGTCCCAGGCCCTGGGGCTCCACCTGCTAAGAGAGCTGGGGGAGGTCCCTAGCTGCTGCAGGCTCTaGCTCAAGTCCAGCAGCCCA +
Preference number: 4 (lower is better)
Translates to: RLSQALGLHLLRELGEVPSCCRL*LKSSSP
Trigger: TGGGCTGCTGGACTTGAGGCAGAGCCTGCAGCAGCT...AGGGACCTCCCCCAGCTCTCTTAGCAGGTGGAGCCCCAGGGCCTGGGACAGCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR GCA 90 bp CAGGCACCTGCCCGATGGCTGAGAGCCAGCCTCACGGTCAGAGAGGCCAGCGGGCTGTGGTGTGAGATCTaGAGACCCACCCAGCAGAGG +
Preference number: 4 (lower is better)
Translates to: QAPARWLRASLTVREASGLWCEI*RPTQQR
Trigger: CCTCTGCTGGGTGGGTCTGCAGATCTCACACCACAG...CCCGCTGGCCTCTCTGACCGTGAGGCTGGCTCTCAGCCATCGGGCAGGTGCCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR GCA 90 bp GCCCGCTTCTGCCAAACCCCACCTGGGCTAAGCCAGGCCCGACCAGGCACCTGCCTGTGGTGTGAGATCTaGAGACCCACCCAGCAGAGG +
Preference number: 4 (lower is better)
Translates to: ARFCQTPPGLSQARPGTCLWCEI*RPTQQR
Trigger: CCTCTGCTGGGTGGGTCTGCAGATCTCACACCACAG...GCAGGTGCCTGGTCGGGCCTGGCTTAGCCCAGGTGGGGTTTGGCAGAAGCGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR GCA 90 bp GGCTGTGCCTCAGCGTGGACAGTCCAGGCCTCACTTGGACCCACACAGAGCCAGGGTCCCTCTGCTCAGTaGCCAGGTGGCAGGGTCCCA +
Preference number: 4 (lower is better)
Translates to: GCASAWTVQASLGPTQSQGPSAQ*PGGRVP
Trigger: TGGGACCCTGCCACCTGGGCACTGAGCAGAGGGACC...CTGGCTCTGTGTGGGTCCAAGTGAGGCCTGGACTGTCCACGCTGAGGCACAGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000625979.2
ENST00000629431.2
CDS-3UTR GCA 90 bp GGCCCAGCCTGGGGTTGGCCCCAGATGGAATATCTTCCACACCCGCCCGCTTCTTGGGGGAGGTCCCTCTaGTCAGTGCCCAGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: GPAWGWPQMEYLPHPPASWGRSL*SVPRWQ
Trigger: CTGCCACCTGGGCACTGAGCAGAGGGACCTCCCCCA...AGAAGCGGGCGGGTGTGGAAGATATTCCATCTGGGGCCAACCCCAGGCTGGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR GCA 90 bp CCACCCAGCTGTCCAGTCACTGCCAAGGCTGCAGTTCCAGGTACCGGGGTGCACGGTGACAGTGGGCGCTaGACCCTAGGCAGCAGTGGG +
Preference number: 4 (lower is better)
Translates to: PPSCPVTAKAAVPGTGVHGDSGR*TLGSSG
Trigger: CCCACTGCTGCCTAGGGTGCAGCGCCCACTGTCACC...GTGCACCCCGGTACCTGGAACTGCAGCCTTGGCAGTGACTGGACAGCTGGGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR GCA 90 bp GGCTGTGCCTCAGCGTGGACAGTCCAGGCCTCACTTGGACCCACACAGAGCCAGGGTGACAGTGGGCGCTaGACCCTAGGCAGCAGTGGG +
Preference number: 4 (lower is better)
Translates to: GCASAWTVQASLGPTQSQGDSGR*TLGSSG
Trigger: CCCACTGCTGCCTAGGGTGCAGCGCCCACTGTCACC...CTGGCTCTGTGTGGGTCCAAGTGAGGCCTGGACTGTCCACGCTGAGGCACAGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000625979.2
ENST00000629431.2
CDS-3UTR GCA 90 bp CTGCCAAGGCTGCAGTTCCAGGTACCGGGGTGCACCTTAGGAGCCCTGTGGGCTGGTGACAGTGGGCGCTaGACCCTAGGCAGCAGTGGG +
Preference number: 4 (lower is better)
Translates to: LPRLQFQVPGCTLGALWAGDSGR*TLGSSG
Trigger: CCCACTGCTGCCTAGGGTGCAGCGCCCACTGTCACC...AGCCCACAGGGCTCCTAAGGTGCACCCCGGTACCTGGAACTGCAGCCTTGGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR GCA 90 bp GGCAGGCTGTCCCAGGCCCTGGGGCTCCACCTGCTAAGAGAGCTGGGGGAGGTCAGTCACTGCCAAGGCTaGAGTTCCAGGTACCGGGGT +
Preference number: 4 (lower is better)
Translates to: GRLSQALGLHLLRELGEVSHCQG*SSRYRG
Trigger: ACCCCGGTACCTGGAACTGCAGCCTTGGCAGTGACT...GACCTCCCCCAGCTCTCTTAGCAGGTGGAGCCCCAGGGCCTGGGACAGCCTGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR GCA 90 bp GCCCGCTTCTGCCAAACCCCACCTGGGCTAAGCCAGGCCCGACCAGGCACCTGCCAGCTGTCCAGTCACTaGCAAGGCTGCAGTTCCAGG +
Preference number: 4 (lower is better)
Translates to: ARFCQTPPGLSQARPGTCQLSSH*QGCSSR
Trigger: CCTGGAACTGCAGCCTTGGCAGTGACTGGACAGCTG...GCAGGTGCCTGGTCGGGCCTGGCTTAGCCCAGGTGGGGTTTGGCAGAAGCGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR GCA 90 bp CAGGCACCTGCCCGATGGCTGAGAGCCAGCCTCACGGTCAGAGAGGCCAGCGGGCAGCTGTCCAGTCACTaGCAAGGCTGCAGTTCCAGG +
Preference number: 4 (lower is better)
Translates to: QAPARWLRASLTVREASGQLSSH*QGCSSR
Trigger: CCTGGAACTGCAGCCTTGGCAGTGACTGGACAGCTG...CCCGCTGGCCTCTCTGACCGTGAGGCTGGCTCTCAGCCATCGGGCAGGTGCCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR GCA 90 bp GTGGGCTTCTTCAGAAGGCAGGGTGACAGTGGGCGCTGCACCCTAGGCAGCAGTGGTGGGCACCCTCGGTaGCAGGGAGAGCCTGCTCTC +
Preference number: 4 (lower is better)
Translates to: VGFFRRQGDSGRCTLGSSGGHPR*QGEPAL
Trigger: GAGAGCAGGCTCTCCCTGGCACCGAGGGTGCCCACC...ACTGCTGCCTAGGGTGCAGCGCCCACTGTCACCCTGCCTTCTGAAGAAGCCCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR GCA 90 bp GCCACTCCCAGCCTCAGACGCAGATGGGCCCGAGAGGTGTTCCTGGGAAACAGTGCCCGACCAGGCACCTaGCCGATGGCTGAGAGCCAG +
Preference number: 4 (lower is better)
Translates to: ATPSLRRRWAREVFLGNSARPGT*PMAESQ
Trigger: CTGGCTCTCAGCCATCGGGCAGGTGCCTGGTCGGGC...ACTGTTTCCCAGGAACACCTCTCGGGCCCATCTGCGTCTGAGGCTGGGAGTGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR GCA 90 bp GCTGTGGCTGATGTTGACGGGGCCACACCAGGGAGAGGGTGGGCACCCTCGGTGGCAAGACCCAGTACCTaGGCTCCAGAAGCTCAGCGC +
Preference number: 4 (lower is better)
Translates to: AVADVDGATPGRGWAPSVARPST*APEAQR
Trigger: GCGCTGAGCTTCTGGAGCGCAGGTACTGGGTCTTGC...CACCGAGGGTGCCCACCCTCTCCCTGGTGTGGCCCCGTCAACATCAGCCACAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR GCA 90 bp GGCAGGCTGTCCCAGGCCCTGGGGCTCCACCTGCTAAGAGAGCTGGGGGAGGTCCCAGGACTGCACAGCTaGAGACTTGCTGGGAACCTG +
Preference number: 4 (lower is better)
Translates to: GRLSQALGLHLLRELGEVPGLHS*RLAGNL
Trigger: CAGGTTCCCAGCAAGTCTGCAGCTGTGCAGTCCTGG...GACCTCCCCCAGCTCTCTTAGCAGGTGGAGCCCCAGGGCCTGGGACAGCCTGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR GCA 90 bp AGGCTGTCCCAGGCCCTGGGGCTCCACCTGCTAAGAGAGCTGGGGGAGGTCCCTCAGGGACCCCAGGACTaGACAGCTGCAGACTTGCTG +
Preference number: 4 (lower is better)
Translates to: RLSQALGLHLLRELGEVPQGPQD*TAADLL
Trigger: CAGCAAGTCTGCAGCTGTGCAGTCCTGGGGTCCCTG...AGGGACCTCCCCCAGCTCTCTTAGCAGGTGGAGCCCCAGGGCCTGGGACAGCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR GCA 90 bp GGGTTGGCCCCAGATGGAATATCTTCCACACCCGCCCGCTTCTGCCAAACCCCAGCAAGGCAGGGCCCCTaGTGGACAGCACGCCCCCTG +
Preference number: 4 (lower is better)
Translates to: GLAPDGISSTPARFCQTPARQGP*WTARPL
Trigger: CAGGGGGCGTGCTGTCCAGCAGGGGCCCTGCCTTGC...TGGGGTTTGGCAGAAGCGGGCGGGTGTGGAAGATATTCCATCTGGGGCCAACCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR GCA 90 bp CAGCAGGAGCACCTGAGTGGGGCTGAGGTCAGACCCACTAACCCACTAATGGGGGCAAGGCAGGGCCCCTaGTGGACAGCACGCCCCCTG +
Preference number: 4 (lower is better)
Translates to: QQEHLSGAEVRPTNPLMGARQGP*WTARPL
Trigger: CAGGGGGCGTGCTGTCCAGCAGGGGCCCTGCCTTGC...CCCCATTAGTGGGTTAGTGGGTCTGACCTCAGCCCCACTCAGGTGCTCCTGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR GCA 90 bp GCTGTGGCTGATGTTGACGGGGCCACACCAGGGAGAGGGTGGGCACCCTCGGTGCCTGGGATGCTGGGCTaGGAAGGAACCAGCCTCAGT +
Preference number: 4 (lower is better)
Translates to: AVADVDGATPGRGWAPSVPGMLG*EGTSLS
Trigger: ACTGAGGCTGGTTCCTTCGCAGCCCAGCATCCCAGG...CACCGAGGGTGCCCACCCTCTCCCTGGTGTGGCCCCGTCAACATCAGCCACAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000540581.5
ENST00000542192.5
ENST00000627083.2
ENST00000630997.2
CDS-3UTR CCA 90 bp AGGCTGTCCCAGGCCCTGGGGCTCCACCTGCTAAGAGAGCTGGGGGAGGTCCCTAATGGGGCTGGGCTGTaGCTGATGTTGACGGGGCCA +
Preference number: 4 (lower is better)
Translates to: RLSQALGLHLLRELGEVPNGAGL*LMLTGP
Trigger: TGGCCCCGTCAACATCAGCCACAGCCCAGCCCCATT...AGGGACCTCCCCCAGCTCTCTTAGCAGGTGGAGCCCCAGGGCCTGGGACAGCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR CCA 90 bp CTGCCAAGGCTGCAGTTCCAGGTACCGGGGTGCACCTTAGGAGCCCTGTGGGCTTGGCACCCAGGGCAGTaGGGACAGCTCTGTGTGGGG +
Preference number: 4 (lower is better)
Translates to: LPRLQFQVPGCTLGALWAWHPGQ*GQLCVG
Trigger: CCCCACACAGAGCTGTCCCCACTGCCCTGGGTGCCA...AGCCCACAGGGCTCCTAAGGTGCACCCCGGTACCTGGAACTGCAGCCTTGGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR CCA 90 bp CCACCCAGCTGTCCAGTCACTGCCAAGGCTGCAGTTCCAGGTACCGGGGTGCACTGGCACCCAGGGCAGTaGGGACAGCTCTGTGTGGGG +
Preference number: 4 (lower is better)
Translates to: PPSCPVTAKAAVPGTGVHWHPGQ*GQLCVG
Trigger: CCCCACACAGAGCTGTCCCCACTGCCCTGGGTGCCA...GTGCACCCCGGTACCTGGAACTGCAGCCTTGGCAGTGACTGGACAGCTGGGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR CCA 90 bp GCTGTGGCTGATGTTGACGGGGCCACACCAGGGAGAGGGTGGGCACCCTCGGTGTGGGGGTGCACATCCTaGGCACCAGCTCTCTGCATC +
Preference number: 4 (lower is better)
Translates to: AVADVDGATPGRGWAPSVWGCTS*APALCI
Trigger: GATGCAGAGAGCTGGTGCCCAGGATGTGCACCCCCA...CACCGAGGGTGCCCACCCTCTCCCTGGTGTGGCCCCGTCAACATCAGCCACAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR CCA 90 bp CTGCCAAGGCTGCAGTTCCAGGTACCGGGGTGCACCTTAGGAGCCCTGTGGGCTCAGGCACCTGCCCGATaGCTGAGAGCCAGCCTCACG +
Preference number: 4 (lower is better)
Translates to: LPRLQFQVPGCTLGALWAQAPAR*LRASLT
Trigger: CGTGAGGCTGGCTCTCAGCCATCGGGCAGGTGCCTG...AGCCCACAGGGCTCCTAAGGTGCACCCCGGTACCTGGAACTGCAGCCTTGGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR CCA 90 bp CCACCCAGCTGTCCAGTCACTGCCAAGGCTGCAGTTCCAGGTACCGGGGTGCACCAGGCACCTGCCCGATaGCTGAGAGCCAGCCTCACG +
Preference number: 4 (lower is better)
Translates to: PPSCPVTAKAAVPGTGVHQAPAR*LRASLT
Trigger: CGTGAGGCTGGCTCTCAGCCATCGGGCAGGTGCCTG...GTGCACCCCGGTACCTGGAACTGCAGCCTTGGCAGTGACTGGACAGCTGGGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR CCA 90 bp GGCAGGCTGTCCCAGGCCCTGGGGCTCCACCTGCTAAGAGAGCTGGGGGAGGTCGGGGTTGGCCCCAGATaGAATATCTTCCACACCCGC +
Preference number: 4 (lower is better)
Translates to: GRLSQALGLHLLRELGEVGVGPR*NIFHTR
Trigger: GCGGGTGTGGAAGATATTCCATCTGGGGCCAACCCC...GACCTCCCCCAGCTCTCTTAGCAGGTGGAGCCCCAGGGCCTGGGACAGCCTGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR CCA 90 bp GGCAGGCTGTCCCAGGCCCTGGGGCTCCACCTGCTAAGAGAGCTGGGGGAGGTCGGCCCAGCCTGGGGTTaGCCCCAGATGGAATATCTT +
Preference number: 4 (lower is better)
Translates to: GRLSQALGLHLLRELGEVGPAWG*PQMEYL
Trigger: AAGATATTCCATCTGGGGCCAACCCCAGGCTGGGCC...GACCTCCCCCAGCTCTCTTAGCAGGTGGAGCCCCAGGGCCTGGGACAGCCTGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR CCA 90 bp CAGGCACCTGCCCGATGGCTGAGAGCCAGCCTCACGGTCAGAGAGGCCAGCGGGGGCCCAGCCTGGGGTTaGCCCCAGATGGAATATCTT +
Preference number: 4 (lower is better)
Translates to: QAPARWLRASLTVREASGGPAWG*PQMEYL
Trigger: AAGATATTCCATCTGGGGCCAACCCCAGGCTGGGCC...CCCGCTGGCCTCTCTGACCGTGAGGCTGGCTCTCAGCCATCGGGCAGGTGCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR CCA 90 bp AGGCTGTCCCAGGCCCTGGGGCTCCACCTGCTAAGAGAGCTGGGGGAGGTCCCTAGCCTCAGACGCAGATaGGCCCGAGAGGTGTTCCTG +
Preference number: 4 (lower is better)
Translates to: RLSQALGLHLLRELGEVPSLRRR*AREVFL
Trigger: CAGGAACACCTCTCGGGCCCATCTGCGTCTGAGGCT...AGGGACCTCCCCCAGCTCTCTTAGCAGGTGGAGCCCCAGGGCCTGGGACAGCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR CCA 90 bp GCCTGGGGTTGGCCCCAGATGGAATATCTTCCACACCCGCCCGCTTCTGCCAAAGGACAGCACGCCCCCTaGGCGACAGGGTCAGGGACC +
Preference number: 4 (lower is better)
Translates to: AWGWPQMEYLPHPPASAKGQHAP*ATGSGT
Trigger: GGTCCCTGACCCTGTCGCCCAGGGGGCGTGCTGTCC...TTTGGCAGAAGCGGGCGGGTGTGGAAGATATTCCATCTGGGGCCAACCCCAGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR CCA 90 bp GGGTTGGCCCCAGATGGAATATCTTCCACACCCGCCCGCTTCTGCCAAACCCCAGGACAGCACGCCCCCTaGGCGACAGGGTCAGGGACC +
Preference number: 4 (lower is better)
Translates to: GLAPDGISSTPARFCQTPGQHAP*ATGSGT
Trigger: GGTCCCTGACCCTGTCGCCCAGGGGGCGTGCTGTCC...TGGGGTTTGGCAGAAGCGGGCGGGTGTGGAAGATATTCCATCTGGGGCCAACCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR CCA 90 bp CTGCCAAGGCTGCAGTTCCAGGTACCGGGGTGCACCTTAGGAGCCCTGTGGGCTATGGCCCAGGCTCCCTaGGATGCTGGGCTGCGAAGG +
Preference number: 4 (lower is better)
Translates to: LPRLQFQVPGCTLGALWAMAQAP*DAGLRR
Trigger: CCTTCGCAGCCCAGCATCCCAGGGAGCCTGGGCCAT...AGCCCACAGGGCTCCTAAGGTGCACCCCGGTACCTGGAACTGCAGCCTTGGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000540581.5
ENST00000542192.5
ENST00000627083.2
ENST00000630997.2
CDS-3UTR CCA 90 bp CCACCCAGCTGTCCAGTCACTGCCAAGGCTGCAGTTCCAGGTACCGGGGTGCACATGGCCCAGGCTCCCTaGGATGCTGGGCTGCGAAGG +
Preference number: 4 (lower is better)
Translates to: PPSCPVTAKAAVPGTGVHMAQAP*DAGLRR
Trigger: CCTTCGCAGCCCAGCATCCCAGGGAGCCTGGGCCAT...GTGCACCCCGGTACCTGGAACTGCAGCCTTGGCAGTGACTGGACAGCTGGGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000540581.5
ENST00000542192.5
ENST00000627083.2
ENST00000630997.2
CDS-3UTR TCA 90 bp CGCAGATGGGCCCGAGAGGTGTTCCTGGGAAACAGTTCACTTAGCAAGACCCAGCCCGGGCGCCCCACCTaGGCTGCTCATGGTGCCACC +
Preference number: 4 (lower is better)
Translates to: RRWAREVFLGNSSLSKTQPGRPT*AAHGAT
Trigger: GGTGGCACCATGAGCAGCTCAGGTGGGGCGCCCGGG...CTGGGTCTTGCTAAGTGAACTGTTTCCCAGGAACACCTCTCGGGCCCATCTGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR TCA 90 bp GGCCCAGCCTGGGGTTGGCCCCAGATGGAATATCTTCCACACCCGCCCGCTTCTCTTCAGAAGGCAGGGTaGCAGTGGGCGCTGCACCCT +
Preference number: 4 (lower is better)
Translates to: GPAWGWPQMEYLPHPPASLQKAG*QWALHP
Trigger: AGGGTGCAGCGCCCACTGTCACCCTGCCTTCTGAAG...AGAAGCGGGCGGGTGTGGAAGATATTCCATCTGGGGCCAACCCCAGGCTGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR TCA 90 bp GGCTGTGCCTCAGCGTGGACAGTCCAGGCCTCACTTGGACCCACACAGAGCCAGCTTCAGAAGGCAGGGTaGCAGTGGGCGCTGCACCCT +
Preference number: 4 (lower is better)
Translates to: GCASAWTVQASLGPTQSQLQKAG*QWALHP
Trigger: AGGGTGCAGCGCCCACTGTCACCCTGCCTTCTGAAG...CTGGCTCTGTGTGGGTCCAAGTGAGGCCTGGACTGTCCACGCTGAGGCACAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000625979.2
ENST00000629431.2
CDS-3UTR TCA 90 bp GTGGGCTTCTTCAGAAGGCAGGGTGACAGTGGGCGCTGCACCCTAGGCAGCAGTGCAGCCGAGGGGCCTTaGGGTGGCCTGTCCAAGGTT +
Preference number: 4 (lower is better)
Translates to: VGFFRRQGDSGRCTLGSSAAEGP*GGLSKV
Trigger: AACCTTGGACAGGCCACCTCAAGGCCCCTCGGCTGC...ACTGCTGCCTAGGGTGCAGCGCCCACTGTCACCCTGCCTTCTGAAGAAGCCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR TCA 90 bp GTGGGCTTCTTCAGAAGGCAGGGTGACAGTGGGCGCTGCACCCTAGGCAGCAGTGCCAGCAGGAGCACCTaGGTGGGGCTGAGGTCAGAC +
Preference number: 4 (lower is better)
Translates to: VGFFRRQGDSGRCTLGSSASRST*VGLRSD
Trigger: GTCTGACCTCAGCCCCACTCAGGTGCTCCTGCTGGC...ACTGCTGCCTAGGGTGCAGCGCCCACTGTCACCCTGCCTTCTGAAGAAGCCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR TCA 90 bp CGTGGACAGTCCAGGCCTCACTTGGACCCACACAGAGCCAGAAGAGGGGACAGGCACCTGCCCGATGGCTaGGAGCCAGCCTCACGGTCA +
Preference number: 4 (lower is better)
Translates to: RGQSRPHLDPHRARRGDRHLPDG*EPASRS
Trigger: TGACCGTGAGGCTGGCTCTCAGCCATCGGGCAGGTG...CCTGTCCCCTCTTCTGGCTCTGTGTGGGTCCAAGTGAGGCCTGGACTGTCCACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000625979.2
ENST00000629431.2
CDS-3UTR TCA 90 bp AGGCTGTCCCAGGCCCTGGGGCTCCACCTGCTAAGAGAGCTGGGGGAGGTCCCTAGGGGCAGCCTTCCTTaGTCCACAGCCAACCCTTCT +
Preference number: 4 (lower is better)
Translates to: RLSQALGLHLLRELGEVPRGSLP*STANPS
Trigger: AGAAGGGTTGGCTGTGGATCAAGGAAGGCTGCCCCT...AGGGACCTCCCCCAGCTCTCTTAGCAGGTGGAGCCCCAGGGCCTGGGACAGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR TCA 90 bp GTCACTGCCAAGGCTGCAGTTCCAGGTACCGGGGTGCACCTTAGGAGCCCTGTGGGAACCTGGGACAGGTaGCACGCCCACTCTCGCCTG +
Preference number: 4 (lower is better)
Translates to: VTAKAAVPGTGVHLRSPVGTWDR*HAHSRL
Trigger: CAGGCGAGAGTGGGCGTGTCACCTGTCCCAGGTTCC...CACAGGGCTCCTAAGGTGCACCCCGGTACCTGGAACTGCAGCCTTGGCAGTGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR TCA 90 bp GGCAGGCTGTCCCAGGCCCTGGGGCTCCACCTGCTAAGAGAGCTGGGGGAGGTCCCCCTGCAGGCATTCTaGTTTCCCCAGAGACAACTG +
Preference number: 4 (lower is better)
Translates to: GRLSQALGLHLLRELGEVPLQAF*FPQRQL
Trigger: CAGTTGTCTCTGGGGAAATCAGAATGCCTGCAGGGG...GACCTCCCCCAGCTCTCTTAGCAGGTGGAGCCCCAGGGCCTGGGACAGCCTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000540581.5
ENST00000542192.5
ENST00000627083.2
ENST00000630997.2
CDS-3UTR TCA 90 bp GCCCGCTTCTGCCAAACCCCACCTGGGCTAAGCCAGGCCCGACCAGGCACCTGCCCCCTGCAGGCATTCTaGTTTCCCCAGAGACAACTG +
Preference number: 4 (lower is better)
Translates to: ARFCQTPPGLSQARPGTCPLQAF*FPQRQL
Trigger: CAGTTGTCTCTGGGGAAATCAGAATGCCTGCAGGGG...GCAGGTGCCTGGTCGGGCCTGGCTTAGCCCAGGTGGGGTTTGGCAGAAGCGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000540581.5
ENST00000542192.5
ENST00000627083.2
ENST00000630997.2
CDS-3UTR GCA 90 bp GTACCGGGGTGCACCTTAGGAGCCCTGTGGGCTTCTTCAGAAGGCAGGGTGACATCCGAGCCGGCGCGCTaGCTTGTGGGAGAGGGAGCA +
Preference number: 4 (lower is better)
Translates to: VPGCTLGALWASSEGRVTSEPAR*LVGEGA
Trigger: TGCTCCCTCTCCCACAAGGCAGCGCGCCGGCTCGGA...TGTCACCCTGCCTTCTGAAGAAGCCCACAGGGCTCCTAAGGTGCACCCCGGTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000291722.11
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000630997.2
CDS-3UTR GCA 90 bp GAAGCTCAGCGCAGGCCCAGCCTGGGGTTGGCCCCAGATGGAATATCTTCCACATCCGAGCCGGCGCGCTaGCTTGTGGGAGAGGGAGCA +
Preference number: 4 (lower is better)
Translates to: EAQRRPSLGLAPDGISSTSEPAR*LVGEGA
Trigger: TGCTCCCTCTCCCACAAGGCAGCGCGCCGGCTCGGA...TGTGGAAGATATTCCATCTGGGGCCAACCCCAGGCTGGGCCTGCGCTGAGCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000291722.11
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000630997.2
CDS-3UTR GCA 90 bp CTGCCAAGGCTGCAGTTCCAGGTACCGGGGTGCACCTTAGGAGCCCTGTGGGCTCTGAGCTGCTCATGGTaGCACCGTCAGGCGCAGCTC +
Preference number: 4 (lower is better)
Translates to: LPRLQFQVPGCTLGALWALSCSW*HRQAQL
Trigger: GAGCTGCGCCTGACGGTGGCACCATGAGCAGCTCAG...AGCCCACAGGGCTCCTAAGGTGCACCCCGGTACCTGGAACTGCAGCCTTGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR GCA 90 bp CCACCCAGCTGTCCAGTCACTGCCAAGGCTGCAGTTCCAGGTACCGGGGTGCACCTGAGCTGCTCATGGTaGCACCGTCAGGCGCAGCTC +
Preference number: 4 (lower is better)
Translates to: PPSCPVTAKAAVPGTGVHLSCSW*HRQAQL
Trigger: GAGCTGCGCCTGACGGTGGCACCATGAGCAGCTCAG...GTGCACCCCGGTACCTGGAACTGCAGCCTTGGCAGTGACTGGACAGCTGGGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR GCA 90 bp GGGGTTGGCCCCAGATGGAATATCTTCCACACCCGCCCGCTTCTGCCAAACCCCGCGCCCCACCTGAGCTaGTCATGGTGCCACCGTCAG +
Preference number: 4 (lower is better)
Translates to: GVGPRWNIFHTRPLLPNPAPHLS*SWCHRQ
Trigger: CTGACGGTGGCACCATGAGCAGCTCAGGTGGGGCGC...GGGGTTTGGCAGAAGCGGGCGGGTGTGGAAGATATTCCATCTGGGGCCAACCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR GCA 90 bp GCCACTCCCAGCCTCAGACGCAGATGGGCCCGAGAGGTGTTCCTGGGAAACAGTGCGCCCCACCTGAGCTaGTCATGGTGCCACCGTCAG +
Preference number: 4 (lower is better)
Translates to: ATPSLRRRWAREVFLGNSAPHLS*SWCHRQ
Trigger: CTGACGGTGGCACCATGAGCAGCTCAGGTGGGGCGC...ACTGTTTCCCAGGAACACCTCTCGGGCCCATCTGCGTCTGAGGCTGGGAGTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR GCA 90 bp GTGGGCTTCTTCAGAAGGCAGGGTGACAGTGGGCGCTGCACCCTAGGCAGCAGTGCGCCCCACCTGAGCTaGTCATGGTGCCACCGTCAG +
Preference number: 4 (lower is better)
Translates to: VGFFRRQGDSGRCTLGSSAPHLS*SWCHRQ
Trigger: CTGACGGTGGCACCATGAGCAGCTCAGGTGGGGCGC...ACTGCTGCCTAGGGTGCAGCGCCCACTGTCACCCTGCCTTCTGAAGAAGCCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR GCA 90 bp GCCTGGGGTTGGCCCCAGATGGAATATCTTCCACACCCGCCCGCTTCTGCCAAAGTCATGCCCTCTTCCTaGGCGGGCGGCGCAGAGCTG +
Preference number: 4 (lower is better)
Translates to: AWGWPQMEYLPHPPASAKVMPSS*AGGAEL
Trigger: CAGCTCTGCGCCGCCCGCGCAGGAAGAGGGCATGAC...TTTGGCAGAAGCGGGCGGGTGTGGAAGATATTCCATCTGGGGCCAACCCCAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR GCA 90 bp CGTGGACAGTCCAGGCCTCACTTGGACCCACACAGAGCCAGAAGAGGGGACAGGGGTACCACCACGTCATaGCCTCTTCCTGCGCGGGCG +
Preference number: 4 (lower is better)
Translates to: RGQSRPHLDPHRARRGDRGTTTS*PLPARA
Trigger: CGCCCGCGCAGGAAGAGGGCATGACGTGGTGGTACC...CCTGTCCCCTCTTCTGGCTCTGTGTGGGTCCAAGTGAGGCCTGGACTGTCCACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000625979.2
ENST00000629431.2
CDS-3UTR GCA 90 bp GGCTGTGCCTCAGCGTGGACAGTCCAGGCCTCACTTGGACCCACACAGAGCCAGGATCGCGCAAGAGACTaGCCCCAGCACCCCAGACAG +
Preference number: 4 (lower is better)
Translates to: GCASAWTVQASLGPTQSQDRARD*PQHPRQ
Trigger: CTGTCTGGGGTGCTGGGGGCAGTCTCTTGCGCGATC...CTGGCTCTGTGTGGGTCCAAGTGAGGCCTGGACTGTCCACGCTGAGGCACAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000625979.2
ENST00000629431.2
CDS-3UTR GCA 90 bp GGCAGGCTGTCCCAGGCCCTGGGGCTCCACCTGCTAAGAGAGCTGGGGGAGGTCTCGCATCGCCCTTTTTaGCCAGAGCAGAGAGTCCGT +
Preference number: 4 (lower is better)
Translates to: GRLSQALGLHLLRELGEVSHRPF*PEQRVR
Trigger: ACGGACTCTCTGCTCTGGGCAAAAAGGGCGATGCGA...GACCTCCCCCAGCTCTCTTAGCAGGTGGAGCCCCAGGGCCTGGGACAGCCTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000625979.2
ENST00000629431.2
CDS-3UTR GCA 90 bp AGGCTGTCCCAGGCCCTGGGGCTCCACCTGCTAAGAGAGCTGGGGGAGGTCCCTTTCTCCTCATCCGCCTaGTGCCTCTGCTGCTGGATC +
Preference number: 4 (lower is better)
Translates to: RLSQALGLHLLRELGEVPFSSSA*CLCCWI
Trigger: GATCCAGCAGCAGAGGCAGCAGGCGGATGAGGAGAA...AGGGACCTCCCCCAGCTCTCTTAGCAGGTGGAGCCCCAGGGCCTGGGACAGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR GCA 90 bp GCTGTGGCTGATGTTGACGGGGCCACACCAGGGAGAGGGTGGGCACCCTCGGTGCTGTGGTGTGAGATCTaGAGACCCACCCAGCAGAGG +
Preference number: 4 (lower is better)
Translates to: AVADVDGATPGRGWAPSVLWCEI*RPTQQR
Trigger: CCTCTGCTGGGTGGGTCTGCAGATCTCACACCACAG...CACCGAGGGTGCCCACCCTCTCCCTGGTGTGGCCCCGTCAACATCAGCCACAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR GCA 90 bp CGTGGACAGTCCAGGCCTCACTTGGACCCACACAGAGCCAGAAGAGGGGACAGGGGTCCCTCTGCTCAGTaGCCAGGTGGCAGGGTCCCA +
Preference number: 4 (lower is better)
Translates to: RGQSRPHLDPHRARRGDRGPSAQ*PGGRVP
Trigger: TGGGACCCTGCCACCTGGGCACTGAGCAGAGGGACC...CCTGTCCCCTCTTCTGGCTCTGTGTGGGTCCAAGTGAGGCCTGGACTGTCCACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000625979.2
ENST00000629431.2
CDS-3UTR GCA 90 bp GCCACTCCCAGCCTCAGACGCAGATGGGCCCGAGAGGTGTTCCTGGGAAACAGTGCAGCAGTGGGAGGTTaGTGGCAGCGGCAGGCTGTC +
Preference number: 4 (lower is better)
Translates to: ATPSLRRRWAREVFLGNSAAVGG*WQRQAV
Trigger: GACAGCCTGCCGCTGCCAGCAACCTCCCACTGCTGC...ACTGTTTCCCAGGAACACCTCTCGGGCCCATCTGCGTCTGAGGCTGGGAGTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR GCA 90 bp AGGCAGCCCTGTCTGTGGTGTGAGATCTGCAGACCCACCCAGCAGAGGAGTAGGGGTGGGCACCCTCGGTaGCAGGGAGAGCCTGCTCTC +
Preference number: 4 (lower is better)
Translates to: RQPCLWCEICRPTQQRSRGGHPR*QGEPAL
Trigger: GAGAGCAGGCTCTCCCTGGCACCGAGGGTGCCCACC...CCTACTCCTCTGCTGGGTGGGTCTGCAGATCTCACACCACAGACAGGGCTGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR GCA 90 bp GAAGCTCAGCGCAGGCCCAGCCTGGGGTTGGCCCCAGATGGAATATCTTCCACAGGTGGGCACCCTCGGTaGCAGGGAGAGCCTGCTCTC +
Preference number: 4 (lower is better)
Translates to: EAQRRPSLGLAPDGISSTGGHPR*QGEPAL
Trigger: GAGAGCAGGCTCTCCCTGGCACCGAGGGTGCCCACC...TGTGGAAGATATTCCATCTGGGGCCAACCCCAGGCTGGGCCTGCGCTGAGCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR GCA 90 bp GCTGTGGCTGATGTTGACGGGGCCACACCAGGGAGAGGGTGGGCACCCTCGGTGGAGGGAATATGGGGGTaGACATCCTGGGCACCAGCT +
Preference number: 4 (lower is better)
Translates to: AVADVDGATPGRGWAPSVEGIWG*TSWAPA
Trigger: AGCTGGTGCCCAGGATGTGCACCCCCATATTCCCTC...CACCGAGGGTGCCCACCCTCTCCCTGGTGTGGCCCCGTCAACATCAGCCACAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR GCA 90 bp GAAGCTCAGCGCAGGCCCAGCCTGGGGTTGGCCCCAGATGGAATATCTTCCACAGCCCGACCAGGCACCTaGCCGATGGCTGAGAGCCAG +
Preference number: 4 (lower is better)
Translates to: EAQRRPSLGLAPDGISSTARPGT*PMAESQ
Trigger: CTGGCTCTCAGCCATCGGGCAGGTGCCTGGTCGGGC...TGTGGAAGATATTCCATCTGGGGCCAACCCCAGGCTGGGCCTGCGCTGAGCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR GCA 90 bp CAGCAGGAGCACCTGAGTGGGGCTGAGGTCAGACCCACTAACCCACTAATGGGGGCCCGACCAGGCACCTaGCCGATGGCTGAGAGCCAG +
Preference number: 4 (lower is better)
Translates to: QQEHLSGAEVRPTNPLMGARPGT*PMAESQ
Trigger: CTGGCTCTCAGCCATCGGGCAGGTGCCTGGTCGGGC...CCCCATTAGTGGGTTAGTGGGTCTGACCTCAGCCCCACTCAGGTGCTCCTGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR GCA 90 bp AGGCAGCCCTGTCTGTGGTGTGAGATCTGCAGACCCACCCAGCAGAGGAGTAGGGCCCGACCAGGCACCTaGCCGATGGCTGAGAGCCAG +
Preference number: 4 (lower is better)
Translates to: RQPCLWCEICRPTQQRSRARPGT*PMAESQ
Trigger: CTGGCTCTCAGCCATCGGGCAGGTGCCTGGTCGGGC...CCTACTCCTCTGCTGGGTGGGTCTGCAGATCTCACACCACAGACAGGGCTGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR GCA 90 bp GGGGTTGGCCCCAGATGGAATATCTTCCACACCCGCCCGCTTCTGCCAAACCCCCCCAGCCCACCAGCCTaGCACTCCTGGCCTCAGATG +
Preference number: 4 (lower is better)
Translates to: GVGPRWNIFHTRPLLPNPPSPPA*HSWPQM
Trigger: CATCTGAGGCCAGGAGTGGCAGGCTGGTGGGCTGGG...GGGGTTTGGCAGAAGCGGGCGGGTGTGGAAGATATTCCATCTGGGGCCAACCCC
64% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR GCA 90 bp CAGGCACCTGCCCGATGGCTGAGAGCCAGCCTCACGGTCAGAGAGGCCAGCGGGAGCCAACCCTTCTCCTaGTGTCTCTGGCTGTCAGTG +
Preference number: 4 (lower is better)
Translates to: QAPARWLRASLTVREASGSQPFS*CLWLSV
Trigger: CACTGACAGCCAGAGACAGCAGGAGAAGGGTTGGCT...CCCGCTGGCCTCTCTGACCGTGAGGCTGGCTCTCAGCCATCGGGCAGGTGCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR GCA 90 bp CAGGCACCTGCCCGATGGCTGAGAGCCAGCCTCACGGTCAGAGAGGCCAGCGGGCTCTGCATCCAGCCATaGACCCACCATTTCCCCACA +
Preference number: 4 (lower is better)
Translates to: QAPARWLRASLTVREASGLCIQP*THHFPT
Trigger: TGTGGGGAAATGGTGGGTGCATGGCTGGATGCAGAG...CCCGCTGGCCTCTCTGACCGTGAGGCTGGCTCTCAGCCATCGGGCAGGTGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR GCA 90 bp GGCCCAGCCTGGGGTTGGCCCCAGATGGAATATCTTCCACACCCGCCCGCTTCTTGGGCCAGCGGCTCCTaGCTGGCTTCCACACTCACA +
Preference number: 4 (lower is better)
Translates to: GPAWGWPQMEYLPHPPASWASGS*LASTLT
Trigger: TGTGAGTGTGGAAGCCAGGCAGGAGCCGCTGGCCCA...AGAAGCGGGCGGGTGTGGAAGATATTCCATCTGGGGCCAACCCCAGGCTGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000625979.2
ENST00000629431.2
CDS-3UTR CCA 90 bp GCTGTGGCTGATGTTGACGGGGCCACACCAGGGAGAGGGTGGGCACCCTCGGTGAGGCAGCCCTGTCTGTaGTGTGAGATCTGCAGACCC +
Preference number: 4 (lower is better)
Translates to: AVADVDGATPGRGWAPSVRQPCL*CEICRP
Trigger: GGGTCTGCAGATCTCACACCACAGACAGGGCTGCCT...CACCGAGGGTGCCCACCCTCTCCCTGGTGTGGCCCCGTCAACATCAGCCACAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR CCA 90 bp GTGGGCTTCTTCAGAAGGCAGGGTGACAGTGGGCGCTGCACCCTAGGCAGCAGTTGCTCAGTGCCCAGGTaGCAGGGTCCCACTTGCCCC +
Preference number: 4 (lower is better)
Translates to: VGFFRRQGDSGRCTLGSSCSVPR*QGPTCP
Trigger: GGGGCAAGTGGGACCCTGCCACCTGGGCACTGAGCA...ACTGCTGCCTAGGGTGCAGCGCCCACTGTCACCCTGCCTTCTGAAGAAGCCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR CCA 90 bp GTGGGCTTCTTCAGAAGGCAGGGTGACAGTGGGCGCTGCACCCTAGGCAGCAGTCACCCTAGGCAGCAGTaGGAGGTTGCTGGCAGCGGC +
Preference number: 4 (lower is better)
Translates to: VGFFRRQGDSGRCTLGSSHPRQQ*EVAGSG
Trigger: GCCGCTGCCAGCAACCTCCCACTGCTGCCTAGGGTG...ACTGCTGCCTAGGGTGCAGCGCCCACTGTCACCCTGCCTTCTGAAGAAGCCCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR CCA 90 bp CTGCCAAGGCTGCAGTTCCAGGTACCGGGGTGCACCTTAGGAGCCCTGTGGGCTCGAGGGGCCTTGAGGTaGCCTGTCCAAGGTTCCCAG +
Preference number: 4 (lower is better)
Translates to: LPRLQFQVPGCTLGALWARGALR*PVQGSQ
Trigger: CTGGGAACCTTGGACAGGCCACCTCAAGGCCCCTCG...AGCCCACAGGGCTCCTAAGGTGCACCCCGGTACCTGGAACTGCAGCCTTGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR CCA 90 bp GTCACTGCCAAGGCTGCAGTTCCAGGTACCGGGGTGCACCTTAGGAGCCCTGTGTGGCACCCAGGGCAGTaGGGACAGCTCTGTGTGGGG +
Preference number: 4 (lower is better)
Translates to: VTAKAAVPGTGVHLRSPVWHPGQ*GQLCVG
Trigger: CCCCACACAGAGCTGTCCCCACTGCCCTGGGTGCCA...CACAGGGCTCCTAAGGTGCACCCCGGTACCTGGAACTGCAGCCTTGGCAGTGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR CCA 90 bp AGGCAGCCCTGTCTGTGGTGTGAGATCTGCAGACCCACCCAGCAGAGGAGTAGGTGGCTCCGGACAGCCTaGCACCCAGGGCAGTGGGGA +
Preference number: 4 (lower is better)
Translates to: RQPCLWCEICRPTQQRSRWLRTA*HPGQWG
Trigger: TCCCCACTGCCCTGGGTGCCAGGCTGTCCGGAGCCA...CCTACTCCTCTGCTGGGTGGGTCTGCAGATCTCACACCACAGACAGGGCTGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR CCA 90 bp CAGCAGGAGCACCTGAGTGGGGCTGAGGTCAGACCCACTAACCCACTAATGGGGTGGCTCCGGACAGCCTaGCACCCAGGGCAGTGGGGA +
Preference number: 4 (lower is better)
Translates to: QQEHLSGAEVRPTNPLMGWLRTA*HPGQWG
Trigger: TCCCCACTGCCCTGGGTGCCAGGCTGTCCGGAGCCA...CCCCATTAGTGGGTTAGTGGGTCTGACCTCAGCCCCACTCAGGTGCTCCTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR CCA 90 bp CCACCCAGCTGTCCAGTCACTGCCAAGGCTGCAGTTCCAGGTACCGGGGTGCACCCAGACTCCCAGGGGTaGGATGCTGCTGACCCAGGA +
Preference number: 4 (lower is better)
Translates to: PPSCPVTAKAAVPGTGVHPDSQG*DAADPG
Trigger: TCCTGGGTCAGCAGCATCCCACCCCTGGGAGTCTGG...GTGCACCCCGGTACCTGGAACTGCAGCCTTGGCAGTGACTGGACAGCTGGGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR CCA 90 bp GTACCGGGGTGCACCTTAGGAGCCCTGTGGGCTTCTTCAGAAGGCAGGGTGACAACCCTGGGGCTCAGCTaGCCAGACTCCCAGGGGTGG +
Preference number: 4 (lower is better)
Translates to: VPGCTLGALWASSEGRVTTLGLS*PDSQGW
Trigger: CCACCCCTGGGAGTCTGGCCAGCTGAGCCCCAGGGT...TGTCACCCTGCCTTCTGAAGAAGCCCACAGGGCTCCTAAGGTGCACCCCGGTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR CCA 90 bp GCCTGGGGTTGGCCCCAGATGGAATATCTTCCACACCCGCCCGCTTCTGCCAAAACCCTGGGGCTCAGCTaGCCAGACTCCCAGGGGTGG +
Preference number: 4 (lower is better)
Translates to: AWGWPQMEYLPHPPASAKTLGLS*PDSQGW
Trigger: CCACCCCTGGGAGTCTGGCCAGCTGAGCCCCAGGGT...TTTGGCAGAAGCGGGCGGGTGTGGAAGATATTCCATCTGGGGCCAACCCCAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR CCA 90 bp GCCCGCTTCTGCCAAACCCCACCTGGGCTAAGCCAGGCCCGACCAGGCACCTGCTTCTCCTGCTGTCTCTaGCTGTCAGTGAGACCCCTC +
Preference number: 4 (lower is better)
Translates to: ARFCQTPPGLSQARPGTCFSCCL*LSVRPL
Trigger: GAGGGGTCTCACTGACAGCCAGAGACAGCAGGAGAA...GCAGGTGCCTGGTCGGGCCTGGCTTAGCCCAGGTGGGGTTTGGCAGAAGCGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR CCA 90 bp GAGGTGACTGTGGCCTCTGCCCAGTTCTTAAAAGGCAGAAGCTCCCTGAGGGCAAGGCAGGGCCCCTGCTaGACAGCACGCCCCCTGGGC +
Preference number: 4 (lower is better)
Translates to: EVTVASAQFLKGRSSLRARQGPC*TARPLG
Trigger: GCCCAGGGGGCGTGCTGTCCAGCAGGGGCCCTGCCT...TGCCCTCAGGGAGCTTCTGCCTTTTAAGAACTGGGCAGAGGCCACAGTCACCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR CCA 90 bp GTGGGCTTCTTCAGAAGGCAGGGTGACAGTGGGCGCTGCACCCTAGGCAGCAGTATGGCCCAGGCTCCCTaGGATGCTGGGCTGCGAAGG +
Preference number: 4 (lower is better)
Translates to: VGFFRRQGDSGRCTLGSSMAQAP*DAGLRR
Trigger: CCTTCGCAGCCCAGCATCCCAGGGAGCCTGGGCCAT...ACTGCTGCCTAGGGTGCAGCGCCCACTGTCACCCTGCCTTCTGAAGAAGCCCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000540581.5
ENST00000542192.5
ENST00000627083.2
ENST00000630997.2
CDS-3UTR CCA 90 bp CAGGCACCTGCCCGATGGCTGAGAGCCAGCCTCACGGTCAGAGAGGCCAGCGGGAGACAACTGCTGGGGTaGCAAAGGCCTGTCTTGTCC +
Preference number: 4 (lower is better)
Translates to: QAPARWLRASLTVREASGRQLLG*QRPVLS
Trigger: GGACAAGACAGGCCTTTGCCACCCCAGCAGTTGTCT...CCCGCTGGCCTCTCTGACCGTGAGGCTGGCTCTCAGCCATCGGGCAGGTGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000540581.5
ENST00000542192.5
ENST00000627083.2
ENST00000630997.2
CDS-3UTR TCA 90 bp AGGCACGCGAGCCACGGCCACGCTTTATTGCTTAAGACGCACACAGAACACAGACCCGGGCGCCCCACCTaGGCTGCTCATGGTGCCACC +
Preference number: 4 (lower is better)
Translates to: RHASHGHALLLKTHTEHRPGRPT*AAHGAT
Trigger: GGTGGCACCATGAGCAGCTCAGGTGGGGCGCCCGGG...TCTGTGTTCTGTGTGCGTCTTAAGCAATAAAGCGTGGCCGTGGCTCGCGTGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR TCA 90 bp CCACCCAGCTGTCCAGTCACTGCCAAGGCTGCAGTTCCAGGTACCGGGGTGCACGCCCTGTCTGTGGTGTaGGATCTGCAGACCCACCCA +
Preference number: 4 (lower is better)
Translates to: PPSCPVTAKAAVPGTGVHALSVV*DLQTHP
Trigger: TGGGTGGGTCTGCAGATCTCACACCACAGACAGGGC...GTGCACCCCGGTACCTGGAACTGCAGCCTTGGCAGTGACTGGACAGCTGGGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR TCA 90 bp GTCACTGCCAAGGCTGCAGTTCCAGGTACCGGGGTGCACCTTAGGAGCCCTGTGCTTCAGAAGGCAGGGTaGCAGTGGGCGCTGCACCCT +
Preference number: 4 (lower is better)
Translates to: VTAKAAVPGTGVHLRSPVLQKAG*QWALHP
Trigger: AGGGTGCAGCGCCCACTGTCACCCTGCCTTCTGAAG...CACAGGGCTCCTAAGGTGCACCCCGGTACCTGGAACTGCAGCCTTGGCAGTGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR TCA 90 bp CAGCAGGAGCACCTGAGTGGGGCTGAGGTCAGACCCACTAACCCACTAATGGGGGCAGCCGAGGGGCCTTaGGGTGGCCTGTCCAAGGTT +
Preference number: 4 (lower is better)
Translates to: QQEHLSGAEVRPTNPLMGAAEGP*GGLSKV
Trigger: AACCTTGGACAGGCCACCTCAAGGCCCCTCGGCTGC...CCCCATTAGTGGGTTAGTGGGTCTGACCTCAGCCCCACTCAGGTGCTCCTGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR TCA 90 bp AAGCTCAGCGCAGGCCCAGCCTGGGGTTGGCCCCAGATGGAATATCTTCCACACGCAGCCGAGGGGCCTTaGGGTGGCCTGTCCAAGGTT +
Preference number: 4 (lower is better)
Translates to: KLSAGPAWGWPQMEYLPHAAEGP*GGLSKV
Trigger: AACCTTGGACAGGCCACCTCAAGGCCCCTCGGCTGC...GTGTGGAAGATATTCCATCTGGGGCCAACCCCAGGCTGGGCCTGCGCTGAGCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR TCA 90 bp GTACCGGGGTGCACCTTAGGAGCCCTGTGGGCTTCTTCAGAAGGCAGGGTGACAGCCAGCAGGAGCACCTaGGTGGGGCTGAGGTCAGAC +
Preference number: 4 (lower is better)
Translates to: VPGCTLGALWASSEGRVTASRST*VGLRSD
Trigger: GTCTGACCTCAGCCCCACTCAGGTGCTCCTGCTGGC...TGTCACCCTGCCTTCTGAAGAAGCCCACAGGGCTCCTAAGGTGCACCCCGGTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR TCA 90 bp AGGCAGCCCTGTCTGTGGTGTGAGATCTGCAGACCCACCCAGCAGAGGAGTAGGAAGGCAGAAGCTCCCTaGGGGCAGGGCTTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: RQPCLWCEICRPTQQRSRKAEAP*GQGLGR
Trigger: CCTGCCCAAGCCCTGCCCTCAGGGAGCTTCTGCCTT...CCTACTCCTCTGCTGGGTGGGTCTGCAGATCTCACACCACAGACAGGGCTGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR TCA 90 bp GCAGTTCCAGGTACCGGGGTGCACCTTAGGAGCCCTGTGGGCTTCTTCAGAAGGAAGGCAGAAGCTCCCTaGGGGCAGGGCTTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: AVPGTGVHLRSPVGFFRRKAEAP*GQGLGR
Trigger: CCTGCCCAAGCCCTGCCCTCAGGGAGCTTCTGCCTT...CCTTCTGAAGAAGCCCACAGGGCTCCTAAGGTGCACCCCGGTACCTGGAACTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR TCA 90 bp GAAGCTCAGCGCAGGCCCAGCCTGGGGTTGGCCCCAGATGGAATATCTTCCACAAAGGCAGAAGCTCCCTaGGGGCAGGGCTTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: EAQRRPSLGLAPDGISSTKAEAP*GQGLGR
Trigger: CCTGCCCAAGCCCTGCCCTCAGGGAGCTTCTGCCTT...TGTGGAAGATATTCCATCTGGGGCCAACCCCAGGCTGGGCCTGCGCTGAGCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR TCA 90 bp GCAGTTCCAGGTACCGGGGTGCACCTTAGGAGCCCTGTGGGCTTCTTCAGAAGGCACCTGCCCGATGGCTaGGAGCCAGCCTCACGGTCA +
Preference number: 4 (lower is better)
Translates to: AVPGTGVHLRSPVGFFRRHLPDG*EPASRS
Trigger: TGACCGTGAGGCTGGCTCTCAGCCATCGGGCAGGTG...CCTTCTGAAGAAGCCCACAGGGCTCCTAAGGTGCACCCCGGTACCTGGAACTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR TCA 90 bp AGGCAGCCCTGTCTGTGGTGTGAGATCTGCAGACCCACCCAGCAGAGGAGTAGGCACCTGCCCGATGGCTaGGAGCCAGCCTCACGGTCA +
Preference number: 4 (lower is better)
Translates to: RQPCLWCEICRPTQQRSRHLPDG*EPASRS
Trigger: TGACCGTGAGGCTGGCTCTCAGCCATCGGGCAGGTG...CCTACTCCTCTGCTGGGTGGGTCTGCAGATCTCACACCACAGACAGGGCTGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR TCA 90 bp GAAGCTCAGCGCAGGCCCAGCCTGGGGTTGGCCCCAGATGGAATATCTTCCACACACCTGCCCGATGGCTaGGAGCCAGCCTCACGGTCA +
Preference number: 4 (lower is better)
Translates to: EAQRRPSLGLAPDGISSTHLPDG*EPASRS
Trigger: TGACCGTGAGGCTGGCTCTCAGCCATCGGGCAGGTG...TGTGGAAGATATTCCATCTGGGGCCAACCCCAGGCTGGGCCTGCGCTGAGCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR TCA 90 bp AAGCTCAGCGCAGGCCCAGCCTGGGGTTGGCCCCAGATGGAATATCTTCCACACGCCCCGGAGGAACCCTaGAGGCACATGTCCACCAGG +
Preference number: 4 (lower is better)
Translates to: KLSAGPAWGWPQMEYLPHAPEEP*RHMSTR
Trigger: CCTGGTGGACATGTGCCTTCAGGGTTCCTCCGGGGC...GTGTGGAAGATATTCCATCTGGGGCCAACCCCAGGCTGGGCCTGCGCTGAGCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR TCA 90 bp GCCTGGGGTTGGCCCCAGATGGAATATCTTCCACACCCGCCCGCTTCTGCCAAAGCCCCGGAGGAACCCTaGAGGCACATGTCCACCAGG +
Preference number: 4 (lower is better)
Translates to: AWGWPQMEYLPHPPASAKAPEEP*RHMSTR
Trigger: CCTGGTGGACATGTGCCTTCAGGGTTCCTCCGGGGC...TTTGGCAGAAGCGGGCGGGTGTGGAAGATATTCCATCTGGGGCCAACCCCAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR TCA 90 bp GCCTGGGGTTGGCCCCAGATGGAATATCTTCCACACCCGCCCGCTTCTGCCAAAGGAACCTGGGACAGGTaGCACGCCCACTCTCGCCTG +
Preference number: 4 (lower is better)
Translates to: AWGWPQMEYLPHPPASAKGTWDR*HAHSRL
Trigger: CAGGCGAGAGTGGGCGTGTCACCTGTCCCAGGTTCC...TTTGGCAGAAGCGGGCGGGTGTGGAAGATATTCCATCTGGGGCCAACCCCAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR TCA 90 bp GGGTTGGCCCCAGATGGAATATCTTCCACACCCGCCCGCTTCTGCCAAACCCCAGGAACCTGGGACAGGTaGCACGCCCACTCTCGCCTG +
Preference number: 4 (lower is better)
Translates to: GLAPDGISSTPARFCQTPGTWDR*HAHSRL
Trigger: CAGGCGAGAGTGGGCGTGTCACCTGTCCCAGGTTCC...TGGGGTTTGGCAGAAGCGGGCGGGTGTGGAAGATATTCCATCTGGGGCCAACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR TCA 90 bp AAGCTCAGCGCAGGCCCAGCCTGGGGTTGGCCCCAGATGGAATATCTTCCACACGGAACCTGGGACAGGTaGCACGCCCACTCTCGCCTG +
Preference number: 4 (lower is better)
Translates to: KLSAGPAWGWPQMEYLPHGTWDR*HAHSRL
Trigger: CAGGCGAGAGTGGGCGTGTCACCTGTCCCAGGTTCC...GTGTGGAAGATATTCCATCTGGGGCCAACCCCAGGCTGGGCCTGCGCTGAGCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR TCA 90 bp GCTGTGGCTGATGTTGACGGGGCCACACCAGGGAGAGGGTGGGCACCCTCGGTGCCCCTGCAGGCATTCTaGTTTCCCCAGAGACAACTG +
Preference number: 4 (lower is better)
Translates to: AVADVDGATPGRGWAPSVPLQAF*FPQRQL
Trigger: CAGTTGTCTCTGGGGAAATCAGAATGCCTGCAGGGG...CACCGAGGGTGCCCACCCTCTCCCTGGTGTGGCCCCGTCAACATCAGCCACAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000540581.5
ENST00000542192.5
ENST00000627083.2
ENST00000630997.2
CDS-3UTR GCA 90 bp GTCACTGCCAAGGCTGCAGTTCCAGGTACCGGGGTGCACCTTAGGAGCCCTGTGCTGAGCTGCTCATGGTaGCACCGTCAGGCGCAGCTC +
Preference number: 4 (lower is better)
Translates to: VTAKAAVPGTGVHLRSPVLSCSW*HRQAQL
Trigger: GAGCTGCGCCTGACGGTGGCACCATGAGCAGCTCAG...CACAGGGCTCCTAAGGTGCACCCCGGTACCTGGAACTGCAGCCTTGGCAGTGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR GCA 90 bp AGGCAGCCCTGTCTGTGGTGTGAGATCTGCAGACCCACCCAGCAGAGGAGTAGGGGTACCACCACGTCATaGCCTCTTCCTGCGCGGGCG +
Preference number: 4 (lower is better)
Translates to: RQPCLWCEICRPTQQRSRGTTTS*PLPARA
Trigger: CGCCCGCGCAGGAAGAGGGCATGACGTGGTGGTACC...CCTACTCCTCTGCTGGGTGGGTCTGCAGATCTCACACCACAGACAGGGCTGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR GCA 90 bp GCCTGGGGTTGGCCCCAGATGGAATATCTTCCACACCCGCCCGCTTCTGCCAAAGGTACCACCACGTCATaGCCTCTTCCTGCGCGGGCG +
Preference number: 4 (lower is better)
Translates to: AWGWPQMEYLPHPPASAKGTTTS*PLPARA
Trigger: CGCCCGCGCAGGAAGAGGGCATGACGTGGTGGTACC...TTTGGCAGAAGCGGGCGGGTGTGGAAGATATTCCATCTGGGGCCAACCCCAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR GCA 90 bp CAGCAGGAGCACCTGAGTGGGGCTGAGGTCAGACCCACTAACCCACTAATGGGGGGTACCACCACGTCATaGCCTCTTCCTGCGCGGGCG +
Preference number: 4 (lower is better)
Translates to: QQEHLSGAEVRPTNPLMGGTTTS*PLPARA
Trigger: CGCCCGCGCAGGAAGAGGGCATGACGTGGTGGTACC...CCCCATTAGTGGGTTAGTGGGTCTGACCTCAGCCCCACTCAGGTGCTCCTGCTG
63% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR GCA 90 bp GAAGCTCAGCGCAGGCCCAGCCTGGGGTTGGCCCCAGATGGAATATCTTCCACAGGTACCACCACGTCATaGCCTCTTCCTGCGCGGGCG +
Preference number: 4 (lower is better)
Translates to: EAQRRPSLGLAPDGISSTGTTTS*PLPARA
Trigger: CGCCCGCGCAGGAAGAGGGCATGACGTGGTGGTACC...TGTGGAAGATATTCCATCTGGGGCCAACCCCAGGCTGGGCCTGCGCTGAGCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR GCA 90 bp GCCACTCCCAGCCTCAGACGCAGATGGGCCCGAGAGGTGTTCCTGGGAAACAGTGATCGCGCAAGAGACTaGCCCCAGCACCCCAGACAG +
Preference number: 4 (lower is better)
Translates to: ATPSLRRRWAREVFLGNSDRARD*PQHPRQ
Trigger: CTGTCTGGGGTGCTGGGGGCAGTCTCTTGCGCGATC...ACTGTTTCCCAGGAACACCTCTCGGGCCCATCTGCGTCTGAGGCTGGGAGTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR GCA 90 bp GTGGGCTTCTTCAGAAGGCAGGGTGACAGTGGGCGCTGCACCCTAGGCAGCAGTGATCGCGCAAGAGACTaGCCCCAGCACCCCAGACAG +
Preference number: 4 (lower is better)
Translates to: VGFFRRQGDSGRCTLGSSDRARD*PQHPRQ
Trigger: CTGTCTGGGGTGCTGGGGGCAGTCTCTTGCGCGATC...ACTGCTGCCTAGGGTGCAGCGCCCACTGTCACCCTGCCTTCTGAAGAAGCCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR GCA 90 bp GTGGGCTTCTTCAGAAGGCAGGGTGACAGTGGGCGCTGCACCCTAGGCAGCAGTCAAAGGCGATGGCGTTaGCCAGCAGCGTGGTCAGGG +
Preference number: 4 (lower is better)
Translates to: VGFFRRQGDSGRCTLGSSQRRWR*PAAWSG
Trigger: CCCTGACCACGCTGCTGGGCAACGCCATCGCCTTTG...ACTGCTGCCTAGGGTGCAGCGCCCACTGTCACCCTGCCTTCTGAAGAAGCCCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR GCA 90 bp AGGCTGTCCCAGGCCCTGGGGCTCCACCTGCTAAGAGAGCTGGGGGAGGTCCCTTCGCATCGCCCTTTTTaGCCAGAGCAGAGAGTCCGT +
Preference number: 4 (lower is better)
Translates to: RLSQALGLHLLRELGEVPSHRPF*PEQRVR
Trigger: ACGGACTCTCTGCTCTGGGCAAAAAGGGCGATGCGA...AGGGACCTCCCCCAGCTCTCTTAGCAGGTGGAGCCCCAGGGCCTGGGACAGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000625979.2
ENST00000629431.2
CDS-3UTR GCA 90 bp CTGCCAAGGCTGCAGTTCCAGGTACCGGGGTGCACCTTAGGAGCCCTGTGGGCTTCCTCATCCGCCTGCTaGCTCTGCTGCTGGATCCTG +
Preference number: 4 (lower is better)
Translates to: LPRLQFQVPGCTLGALWASSSAC*LCCWIL
Trigger: CAGGATCCAGCAGCAGAGGCAGCAGGCGGATGAGGA...AGCCCACAGGGCTCCTAAGGTGCACCCCGGTACCTGGAACTGCAGCCTTGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR GCA 90 bp CTGCCAAGGCTGCAGTTCCAGGTACCGGGGTGCACCTTAGGAGCCCTGTGGGCTAGGTGTAGGGACACGTaGAAAGGCCCCTCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: LPRLQFQVPGCTLGALWARCRDT*KGPSPG
Trigger: GCCTGGAGAGGGGCCTTTGCACGTGTCCCTACACCT...AGCCCACAGGGCTCCTAAGGTGCACCCCGGTACCTGGAACTGCAGCCTTGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR GCA 90 bp GTACCGGGGTGCACCTTAGGAGCCCTGTGGGCTTCTTCAGAAGGCAGGGTGACAGGTCCCTCTGCTCAGTaGCCAGGTGGCAGGGTCCCA +
Preference number: 4 (lower is better)
Translates to: VPGCTLGALWASSEGRVTGPSAQ*PGGRVP
Trigger: TGGGACCCTGCCACCTGGGCACTGAGCAGAGGGACC...TGTCACCCTGCCTTCTGAAGAAGCCCACAGGGCTCCTAAGGTGCACCCCGGTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR GCA 90 bp AGGCAGCCCTGTCTGTGGTGTGAGATCTGCAGACCCACCCAGCAGAGGAGTAGGGGTCCCTCTGCTCAGTaGCCAGGTGGCAGGGTCCCA +
Preference number: 4 (lower is better)
Translates to: RQPCLWCEICRPTQQRSRGPSAQ*PGGRVP
Trigger: TGGGACCCTGCCACCTGGGCACTGAGCAGAGGGACC...CCTACTCCTCTGCTGGGTGGGTCTGCAGATCTCACACCACAGACAGGGCTGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR GCA 90 bp CAGCAGGAGCACCTGAGTGGGGCTGAGGTCAGACCCACTAACCCACTAATGGGGTGGGGGAGGTCCCTCTaGTCAGTGCCCAGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: QQEHLSGAEVRPTNPLMGWGRSL*SVPRWQ
Trigger: CTGCCACCTGGGCACTGAGCAGAGGGACCTCCCCCA...CCCCATTAGTGGGTTAGTGGGTCTGACCTCAGCCCCACTCAGGTGCTCCTGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR GCA 90 bp GAAGCTCAGCGCAGGCCCAGCCTGGGGTTGGCCCCAGATGGAATATCTTCCACATGGGGGAGGTCCCTCTaGTCAGTGCCCAGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: EAQRRPSLGLAPDGISSTWGRSL*SVPRWQ
Trigger: CTGCCACCTGGGCACTGAGCAGAGGGACCTCCCCCA...TGTGGAAGATATTCCATCTGGGGCCAACCCCAGGCTGGGCCTGCGCTGAGCTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR GCA 90 bp GCAGTTCCAGGTACCGGGGTGCACCTTAGGAGCCCTGTGGGCTTCTTCAGAAGGTGGGGGAGGTCCCTCTaGTCAGTGCCCAGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: AVPGTGVHLRSPVGFFRRWGRSL*SVPRWQ
Trigger: CTGCCACCTGGGCACTGAGCAGAGGGACCTCCCCCA...CCTTCTGAAGAAGCCCACAGGGCTCCTAAGGTGCACCCCGGTACCTGGAACTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR GCA 90 bp GGGTTGGCCCCAGATGGAATATCTTCCACACCCGCCCGCTTCTGCCAAACCCCATGGGGGAGGTCCCTCTaGTCAGTGCCCAGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: GLAPDGISSTPARFCQTPWGRSL*SVPRWQ
Trigger: CTGCCACCTGGGCACTGAGCAGAGGGACCTCCCCCA...TGGGGTTTGGCAGAAGCGGGCGGGTGTGGAAGATATTCCATCTGGGGCCAACCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR GCA 90 bp GCAGTTCCAGGTACCGGGGTGCACCTTAGGAGCCCTGTGGGCTTCTTCAGAAGGGCAGCAGTGGGAGGTTaGTGGCAGCGGCAGGCTGTC +
Preference number: 4 (lower is better)
Translates to: AVPGTGVHLRSPVGFFRRAAVGG*WQRQAV
Trigger: GACAGCCTGCCGCTGCCAGCAACCTCCCACTGCTGC...CCTTCTGAAGAAGCCCACAGGGCTCCTAAGGTGCACCCCGGTACCTGGAACTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR GCA 90 bp AGGCAGCCCTGTCTGTGGTGTGAGATCTGCAGACCCACCCAGCAGAGGAGTAGGGCAGCAGTGGGAGGTTaGTGGCAGCGGCAGGCTGTC +
Preference number: 4 (lower is better)
Translates to: RQPCLWCEICRPTQQRSRAAVGG*WQRQAV
Trigger: GACAGCCTGCCGCTGCCAGCAACCTCCCACTGCTGC...CCTACTCCTCTGCTGGGTGGGTCTGCAGATCTCACACCACAGACAGGGCTGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR GCA 90 bp GAAGCTCAGCGCAGGCCCAGCCTGGGGTTGGCCCCAGATGGAATATCTTCCACAGCAGCAGTGGGAGGTTaGTGGCAGCGGCAGGCTGTC +
Preference number: 4 (lower is better)
Translates to: EAQRRPSLGLAPDGISSTAAVGG*WQRQAV
Trigger: GACAGCCTGCCGCTGCCAGCAACCTCCCACTGCTGC...TGTGGAAGATATTCCATCTGGGGCCAACCCCAGGCTGGGCCTGCGCTGAGCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR GCA 90 bp GCAGTTCCAGGTACCGGGGTGCACCTTAGGAGCCCTGTGGGCTTCTTCAGAAGGGGTGACAGTGGGCGCTaGACCCTAGGCAGCAGTGGG +
Preference number: 4 (lower is better)
Translates to: AVPGTGVHLRSPVGFFRRGDSGR*TLGSSG
Trigger: CCCACTGCTGCCTAGGGTGCAGCGCCCACTGTCACC...CCTTCTGAAGAAGCCCACAGGGCTCCTAAGGTGCACCCCGGTACCTGGAACTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR GCA 90 bp AGGCAGCCCTGTCTGTGGTGTGAGATCTGCAGACCCACCCAGCAGAGGAGTAGGGGTGACAGTGGGCGCTaGACCCTAGGCAGCAGTGGG +
Preference number: 4 (lower is better)
Translates to: RQPCLWCEICRPTQQRSRGDSGR*TLGSSG
Trigger: CCCACTGCTGCCTAGGGTGCAGCGCCCACTGTCACC...CCTACTCCTCTGCTGGGTGGGTCTGCAGATCTCACACCACAGACAGGGCTGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR GCA 90 bp CTGCCAAGGCTGCAGTTCCAGGTACCGGGGTGCACCTTAGGAGCCCTGTGGGCTTTCCAGGTACCGGGGTaGACCTTAGGAGCCCTGTGG +
Preference number: 4 (lower is better)
Translates to: LPRLQFQVPGCTLGALWAFQVPG*TLGALW
Trigger: CCACAGGGCTCCTAAGGTGCACCCCGGTACCTGGAA...AGCCCACAGGGCTCCTAAGGTGCACCCCGGTACCTGGAACTGCAGCCTTGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR GCA 90 bp CCACCCAGCTGTCCAGTCACTGCCAAGGCTGCAGTTCCAGGTACCGGGGTGCACTTCCAGGTACCGGGGTaGACCTTAGGAGCCCTGTGG +
Preference number: 4 (lower is better)
Translates to: PPSCPVTAKAAVPGTGVHFQVPG*TLGALW
Trigger: CCACAGGGCTCCTAAGGTGCACCCCGGTACCTGGAA...GTGCACCCCGGTACCTGGAACTGCAGCCTTGGCAGTGACTGGACAGCTGGGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR GCA 90 bp CCACCCAGCTGTCCAGTCACTGCCAAGGCTGCAGTTCCAGGTACCGGGGTGCACGTGCCAGGGAGAGCCTaGTCTCCCCACTTCCTTAGC +
Preference number: 4 (lower is better)
Translates to: PPSCPVTAKAAVPGTGVHVPGRA*SPHFLS
Trigger: GCTAAGGAAGTGGGGAGAGCAGGCTCTCCCTGGCAC...GTGCACCCCGGTACCTGGAACTGCAGCCTTGGCAGTGACTGGACAGCTGGGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR GCA 90 bp GTGACTGTGGCCTCTGCCCAGTTCTTAAAAGGCAGAAGCTCCCTGAGGGCAGGGGGTGGGCACCCTCGGTaGCAGGGAGAGCCTGCTCTC +
Preference number: 4 (lower is better)
Translates to: VTVASAQFLKGRSSLRAGGGHPR*QGEPAL
Trigger: GAGAGCAGGCTCTCCCTGGCACCGAGGGTGCCCACC...CCCTGCCCTCAGGGAGCTTCTGCCTTTTAAGAACTGGGCAGAGGCCACAGTCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR GCA 90 bp GGCAGGCTGTCCCAGGCCCTGGGGCTCCACCTGCTAAGAGAGCTGGGGGAGGTCGGTGACTGTGGCCTCTaGCCAGTTCTTAAAAGGCAG +
Preference number: 4 (lower is better)
Translates to: GRLSQALGLHLLRELGEVGDCGL*PVLKRQ
Trigger: CTGCCTTTTAAGAACTGGGCAGAGGCCACAGTCACC...GACCTCCCCCAGCTCTCTTAGCAGGTGGAGCCCCAGGGCCTGGGACAGCCTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR GCA 90 bp GCCCGCTTCTGCCAAACCCCACCTGGGCTAAGCCAGGCCCGACCAGGCACCTGCGGTGACTGTGGCCTCTaGCCAGTTCTTAAAAGGCAG +
Preference number: 4 (lower is better)
Translates to: ARFCQTPPGLSQARPGTCGDCGL*PVLKRQ
Trigger: CTGCCTTTTAAGAACTGGGCAGAGGCCACAGTCACC...GCAGGTGCCTGGTCGGGCCTGGCTTAGCCCAGGTGGGGTTTGGCAGAAGCGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR GCA 90 bp GCCACTCCCAGCCTCAGACGCAGATGGGCCCGAGAGGTGTTCCTGGGAAACAGTACACCCGCCCGCTTCTaGCAAACCCCACCTGGGCTA +
Preference number: 4 (lower is better)
Translates to: ATPSLRRRWAREVFLGNSTPARF*QTPPGL
Trigger: TAGCCCAGGTGGGGTTTGGCAGAAGCGGGCGGGTGT...ACTGTTTCCCAGGAACACCTCTCGGGCCCATCTGCGTCTGAGGCTGGGAGTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR GCA 90 bp GGCTGTGCCTCAGCGTGGACAGTCCAGGCCTCACTTGGACCCACACAGAGCCAGGCAAGACCCAGTACCTaGGCTCCAGAAGCTCAGCGC +
Preference number: 4 (lower is better)
Translates to: GCASAWTVQASLGPTQSQARPST*APEAQR
Trigger: GCGCTGAGCTTCTGGAGCGCAGGTACTGGGTCTTGC...CTGGCTCTGTGTGGGTCCAAGTGAGGCCTGGACTGTCCACGCTGAGGCACAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000625979.2
ENST00000629431.2
CDS-3UTR GCA 90 bp CTGCCAAGGCTGCAGTTCCAGGTACCGGGGTGCACCTTAGGAGCCCTGTGGGCTACTCCTGGCCTCAGATaGCACTCCCGGCCTCAGATG +
Preference number: 4 (lower is better)
Translates to: LPRLQFQVPGCTLGALWATPGLR*HSRPQM
Trigger: CATCTGAGGCCGGGAGTGGCATCTGAGGCCAGGAGT...AGCCCACAGGGCTCCTAAGGTGCACCCCGGTACCTGGAACTGCAGCCTTGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR GCA 90 bp GGCTGTGCCTCAGCGTGGACAGTCCAGGCCTCACTTGGACCCACACAGAGCCAGACTCCTGGCCTCAGATaGCACTCCCGGCCTCAGATG +
Preference number: 4 (lower is better)
Translates to: GCASAWTVQASLGPTQSQTPGLR*HSRPQM
Trigger: CATCTGAGGCCGGGAGTGGCATCTGAGGCCAGGAGT...CTGGCTCTGTGTGGGTCCAAGTGAGGCCTGGACTGTCCACGCTGAGGCACAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000625979.2
ENST00000629431.2
CDS-3UTR GCA 90 bp AGGCAGCCCTGTCTGTGGTGTGAGATCTGCAGACCCACCCAGCAGAGGAGTAGGCCCAGCCCACCAGCCTaGCACTCCTGGCCTCAGATG +
Preference number: 4 (lower is better)
Translates to: RQPCLWCEICRPTQQRSRPSPPA*HSWPQM
Trigger: CATCTGAGGCCAGGAGTGGCAGGCTGGTGGGCTGGG...CCTACTCCTCTGCTGGGTGGGTCTGCAGATCTCACACCACAGACAGGGCTGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR GCA 90 bp CTGCCAAGGCTGCAGTTCCAGGTACCGGGGTGCACCTTAGGAGCCCTGTGGGCTCAGGGACCCCAGGACTaGACAGCTGCAGACTTGCTG +
Preference number: 4 (lower is better)
Translates to: LPRLQFQVPGCTLGALWAQGPQD*TAADLL
Trigger: CAGCAAGTCTGCAGCTGTGCAGTCCTGGGGTCCCTG...AGCCCACAGGGCTCCTAAGGTGCACCCCGGTACCTGGAACTGCAGCCTTGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR GCA 90 bp GCCACTCCCAGCCTCAGACGCAGATGGGCCCGAGAGGTGTTCCTGGGAAACAGTTGGGCCAGCGGCTCCTaGCTGGCTTCCACACTCACA +
Preference number: 4 (lower is better)
Translates to: ATPSLRRRWAREVFLGNSWASGS*LASTLT
Trigger: TGTGAGTGTGGAAGCCAGGCAGGAGCCGCTGGCCCA...ACTGTTTCCCAGGAACACCTCTCGGGCCCATCTGCGTCTGAGGCTGGGAGTGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000625979.2
ENST00000629431.2
CDS-3UTR GCA 90 bp CTGCCAAGGCTGCAGTTCCAGGTACCGGGGTGCACCTTAGGAGCCCTGTGGGCTCCTGGGATGCTGGGCTaGGAAGGAACCAGCCTCAGT +
Preference number: 4 (lower is better)
Translates to: LPRLQFQVPGCTLGALWAPGMLG*EGTSLS
Trigger: ACTGAGGCTGGTTCCTTCGCAGCCCAGCATCCCAGG...AGCCCACAGGGCTCCTAAGGTGCACCCCGGTACCTGGAACTGCAGCCTTGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000540581.5
ENST00000542192.5
ENST00000627083.2
ENST00000630997.2
CDS-3UTR CCA 90 bp CTGCCAAGGCTGCAGTTCCAGGTACCGGGGTGCACCTTAGGAGCCCTGTGGGCTCGGCGCGCTGCCTTGTaGGAGAGGGAGCATATTAGC +
Preference number: 4 (lower is better)
Translates to: LPRLQFQVPGCTLGALWARRAAL*EREHIS
Trigger: GCTAATATGCTCCCTCTCCCACAAGGCAGCGCGCCG...AGCCCACAGGGCTCCTAAGGTGCACCCCGGTACCTGGAACTGCAGCCTTGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000291722.11
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000630997.2
CDS-3UTR CCA 90 bp GCTGTGGCTGATGTTGACGGGGCCACACCAGGGAGAGGGTGGGCACCCTCGGTGTCTGCTGCTGGATCCTaGCATAGGAGATCGCATCGC +
Preference number: 4 (lower is better)
Translates to: AVADVDGATPGRGWAPSVSAAGS*HRRSHR
Trigger: GCGATGCGATCTCCTATGCCAGGATCCAGCAGCAGA...CACCGAGGGTGCCCACCCTCTCCCTGGTGTGGCCCCGTCAACATCAGCCACAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR CCA 90 bp GGCCCAGCCTGGGGTTGGCCCCAGATGGAATATCTTCCACACCCGCCCGCTTCTGGCTGTGCCTCAGCGTaGACAGTCCAGGCCTCACTT +
Preference number: 4 (lower is better)
Translates to: GPAWGWPQMEYLPHPPASGCASA*TVQASL
Trigger: AAGTGAGGCCTGGACTGTCCACGCTGAGGCACAGCC...AGAAGCGGGCGGGTGTGGAAGATATTCCATCTGGGGCCAACCCCAGGCTGGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR CCA 90 bp CCACCCAGCTGTCCAGTCACTGCCAAGGCTGCAGTTCCAGGTACCGGGGTGCACGGCTGTGCCTCAGCGTaGACAGTCCAGGCCTCACTT +
Preference number: 4 (lower is better)
Translates to: PPSCPVTAKAAVPGTGVHGCASA*TVQASL
Trigger: AAGTGAGGCCTGGACTGTCCACGCTGAGGCACAGCC...GTGCACCCCGGTACCTGGAACTGCAGCCTTGGCAGTGACTGGACAGCTGGGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR CCA 90 bp GAAGCTCAGCGCAGGCCCAGCCTGGGGTTGGCCCCAGATGGAATATCTTCCACATGCTCAGTGCCCAGGTaGCAGGGTCCCACTTGCCCC +
Preference number: 4 (lower is better)
Translates to: EAQRRPSLGLAPDGISSTCSVPR*QGPTCP
Trigger: GGGGCAAGTGGGACCCTGCCACCTGGGCACTGAGCA...TGTGGAAGATATTCCATCTGGGGCCAACCCCAGGCTGGGCCTGCGCTGAGCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR CCA 90 bp GCCTGGGGTTGGCCCCAGATGGAATATCTTCCACACCCGCCCGCTTCTGCCAAAGCAGTGGGAGGTTGCTaGCAGCGGCAGGCTGTCCCA +
Preference number: 4 (lower is better)
Translates to: AWGWPQMEYLPHPPASAKAVGGC*QRQAVP
Trigger: TGGGACAGCCTGCCGCTGCCAGCAACCTCCCACTGC...TTTGGCAGAAGCGGGCGGGTGTGGAAGATATTCCATCTGGGGCCAACCCCAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR CCA 90 bp GGGTTGGCCCCAGATGGAATATCTTCCACACCCGCCCGCTTCTGCCAAACCCCAGCAGTGGGAGGTTGCTaGCAGCGGCAGGCTGTCCCA +
Preference number: 4 (lower is better)
Translates to: GLAPDGISSTPARFCQTPAVGGC*QRQAVP
Trigger: TGGGACAGCCTGCCGCTGCCAGCAACCTCCCACTGC...TGGGGTTTGGCAGAAGCGGGCGGGTGTGGAAGATATTCCATCTGGGGCCAACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR CCA 90 bp AGGCAGCCCTGTCTGTGGTGTGAGATCTGCAGACCCACCCAGCAGAGGAGTAGGGCAGTGGGAGGTTGCTaGCAGCGGCAGGCTGTCCCA +
Preference number: 4 (lower is better)
Translates to: RQPCLWCEICRPTQQRSRAVGGC*QRQAVP
Trigger: TGGGACAGCCTGCCGCTGCCAGCAACCTCCCACTGC...CCTACTCCTCTGCTGGGTGGGTCTGCAGATCTCACACCACAGACAGGGCTGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR CCA 90 bp AAGCTCAGCGCAGGCCCAGCCTGGGGTTGGCCCCAGATGGAATATCTTCCACACCACCCTAGGCAGCAGTaGGAGGTTGCTGGCAGCGGC +
Preference number: 4 (lower is better)
Translates to: KLSAGPAWGWPQMEYLPHHPRQQ*EVAGSG
Trigger: GCCGCTGCCAGCAACCTCCCACTGCTGCCTAGGGTG...GTGTGGAAGATATTCCATCTGGGGCCAACCCCAGGCTGGGCCTGCGCTGAGCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR CCA 90 bp GGGTTGGCCCCAGATGGAATATCTTCCACACCCGCCCGCTTCTGCCAAACCCCACACCCTAGGCAGCAGTaGGAGGTTGCTGGCAGCGGC +
Preference number: 4 (lower is better)
Translates to: GLAPDGISSTPARFCQTPHPRQQ*EVAGSG
Trigger: GCCGCTGCCAGCAACCTCCCACTGCTGCCTAGGGTG...TGGGGTTTGGCAGAAGCGGGCGGGTGTGGAAGATATTCCATCTGGGGCCAACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR CCA 90 bp GGCCCAGCCTGGGGTTGGCCCCAGATGGAATATCTTCCACACCCGCCCGCTTCTAATGGGGCTGGGCTGTaGCTGATGTTGACGGGGCCA +
Preference number: 4 (lower is better)
Translates to: GPAWGWPQMEYLPHPPASNGAGL*LMLTGP
Trigger: TGGCCCCGTCAACATCAGCCACAGCCCAGCCCCATT...AGAAGCGGGCGGGTGTGGAAGATATTCCATCTGGGGCCAACCCCAGGCTGGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR CCA 90 bp CAGCAGGAGCACCTGAGTGGGGCTGAGGTCAGACCCACTAACCCACTAATGGGGTGGCACCCAGGGCAGTaGGGACAGCTCTGTGTGGGG +
Preference number: 4 (lower is better)
Translates to: QQEHLSGAEVRPTNPLMGWHPGQ*GQLCVG
Trigger: CCCCACACAGAGCTGTCCCCACTGCCCTGGGTGCCA...CCCCATTAGTGGGTTAGTGGGTCTGACCTCAGCCCCACTCAGGTGCTCCTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR CCA 90 bp GCAGTTCCAGGTACCGGGGTGCACCTTAGGAGCCCTGTGGGCTTCTTCAGAAGGTGGCACCCAGGGCAGTaGGGACAGCTCTGTGTGGGG +
Preference number: 4 (lower is better)
Translates to: AVPGTGVHLRSPVGFFRRWHPGQ*GQLCVG
Trigger: CCCCACACAGAGCTGTCCCCACTGCCCTGGGTGCCA...CCTTCTGAAGAAGCCCACAGGGCTCCTAAGGTGCACCCCGGTACCTGGAACTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR CCA 90 bp GTACCGGGGTGCACCTTAGGAGCCCTGTGGGCTTCTTCAGAAGGCAGGGTGACATGGCACCCAGGGCAGTaGGGACAGCTCTGTGTGGGG +
Preference number: 4 (lower is better)
Translates to: VPGCTLGALWASSEGRVTWHPGQ*GQLCVG
Trigger: CCCCACACAGAGCTGTCCCCACTGCCCTGGGTGCCA...TGTCACCCTGCCTTCTGAAGAAGCCCACAGGGCTCCTAAGGTGCACCCCGGTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR CCA 90 bp GTCACTGCCAAGGCTGCAGTTCCAGGTACCGGGGTGCACCTTAGGAGCCCTGTGTCTCTGCATCCTCCCTaGGTAGGCCTGGCTCCGGAC +
Preference number: 4 (lower is better)
Translates to: VTAKAAVPGTGVHLRSPVSLHPP*VGLAPD
Trigger: GTCCGGAGCCAGGCCTACCCAGGGAGGATGCAGAGA...CACAGGGCTCCTAAGGTGCACCCCGGTACCTGGAACTGCAGCCTTGGCAGTGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR CCA 90 bp GCCACTCCCAGCCTCAGACGCAGATGGGCCCGAGAGGTGTTCCTGGGAAACAGTCCAGACTCCCAGGGGTaGGATGCTGCTGACCCAGGA +
Preference number: 4 (lower is better)
Translates to: ATPSLRRRWAREVFLGNSPDSQG*DAADPG
Trigger: TCCTGGGTCAGCAGCATCCCACCCCTGGGAGTCTGG...ACTGTTTCCCAGGAACACCTCTCGGGCCCATCTGCGTCTGAGGCTGGGAGTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR CCA 90 bp GCTGTGGCTGATGTTGACGGGGCCACACCAGGGAGAGGGTGGGCACCCTCGGTGAGCCCTTGCTCCTTGTaGGAGGTAGACAGGTCTCAC +
Preference number: 4 (lower is better)
Translates to: AVADVDGATPGRGWAPSVSPCSL*EVDRSH
Trigger: GTGAGACCTGTCTACCTCCCACAAGGAGCAAGGGCT...CACCGAGGGTGCCCACCCTCTCCCTGGTGTGGCCCCGTCAACATCAGCCACAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR CCA 90 bp AGGCACGCGAGCCACGGCCACGCTTTATTGCTTAAGACGCACACAGAACACAGAAGGCAGGGCCCCTGCTaGACAGCACGCCCCCTGGGC +
Preference number: 4 (lower is better)
Translates to: RHASHGHALLLKTHTEHRRQGPC*TARPLG
Trigger: GCCCAGGGGGCGTGCTGTCCAGCAGGGGCCCTGCCT...TCTGTGTTCTGTGTGCGTCTTAAGCAATAAAGCGTGGCCGTGGCTCGCGTGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR CCA 90 bp CTGCCAAGGCTGCAGTTCCAGGTACCGGGGTGCACCTTAGGAGCCCTGTGGGCTCCAGCGGCTCCTGCCTaGCTTCCACACTCACACACA +
Preference number: 4 (lower is better)
Translates to: LPRLQFQVPGCTLGALWAPAAPA*LPHSHT
Trigger: TGTGTGTGAGTGTGGAAGCCAGGCAGGAGCCGCTGG...AGCCCACAGGGCTCCTAAGGTGCACCCCGGTACCTGGAACTGCAGCCTTGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000625979.2
ENST00000629431.2
CDS-3UTR CCA 90 bp GAAGCTCAGCGCAGGCCCAGCCTGGGGTTGGCCCCAGATGGAATATCTTCCACAATGGCCCAGGCTCCCTaGGATGCTGGGCTGCGAAGG +
Preference number: 4 (lower is better)
Translates to: EAQRRPSLGLAPDGISSTMAQAP*DAGLRR
Trigger: CCTTCGCAGCCCAGCATCCCAGGGAGCCTGGGCCAT...TGTGGAAGATATTCCATCTGGGGCCAACCCCAGGCTGGGCCTGCGCTGAGCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000540581.5
ENST00000542192.5
ENST00000627083.2
ENST00000630997.2
CDS-3UTR TCA 90 bp CAGCAGGAGCACCTGAGTGGGGCTGAGGTCAGACCCACTAACCCACTAATGGGGCTTCAGAAGGCAGGGTaGCAGTGGGCGCTGCACCCT +
Preference number: 4 (lower is better)
Translates to: QQEHLSGAEVRPTNPLMGLQKAG*QWALHP
Trigger: AGGGTGCAGCGCCCACTGTCACCCTGCCTTCTGAAG...CCCCATTAGTGGGTTAGTGGGTCTGACCTCAGCCCCACTCAGGTGCTCCTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR TCA 90 bp GTGACTGTGGCCTCTGCCCAGTTCTTAAAAGGCAGAAGCTCCCTGAGGGCAGGGAAGGCAGAAGCTCCCTaGGGGCAGGGCTTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: VTVASAQFLKGRSSLRAGKAEAP*GQGLGR
Trigger: CCTGCCCAAGCCCTGCCCTCAGGGAGCTTCTGCCTT...CCCTGCCCTCAGGGAGCTTCTGCCTTTTAAGAACTGGGCAGAGGCCACAGTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR TCA 90 bp AGGCAGCCCTGTCTGTGGTGTGAGATCTGCAGACCCACCCAGCAGAGGAGTAGGCTCTGTGTGGGGAGGTaGCTGTGGCCTCTGCCCAGT +
Preference number: 4 (lower is better)
Translates to: RQPCLWCEICRPTQQRSRLCVGR*LWPLPS
Trigger: ACTGGGCAGAGGCCACAGTCACCTCCCCACACAGAG...CCTACTCCTCTGCTGGGTGGGTCTGCAGATCTCACACCACAGACAGGGCTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR TCA 90 bp GGGTTGGCCCCAGATGGAATATCTTCCACACCCGCCCGCTTCTGCCAAACCCCACTCTGTGTGGGGAGGTaGCTGTGGCCTCTGCCCAGT +
Preference number: 4 (lower is better)
Translates to: GLAPDGISSTPARFCQTPLCVGR*LWPLPS
Trigger: ACTGGGCAGAGGCCACAGTCACCTCCCCACACAGAG...TGGGGTTTGGCAGAAGCGGGCGGGTGTGGAAGATATTCCATCTGGGGCCAACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR TCA 90 bp GAAGCTCAGCGCAGGCCCAGCCTGGGGTTGGCCCCAGATGGAATATCTTCCACACTCTGTGTGGGGAGGTaGCTGTGGCCTCTGCCCAGT +
Preference number: 4 (lower is better)
Translates to: EAQRRPSLGLAPDGISSTLCVGR*LWPLPS
Trigger: ACTGGGCAGAGGCCACAGTCACCTCCCCACACAGAG...TGTGGAAGATATTCCATCTGGGGCCAACCCCAGGCTGGGCCTGCGCTGAGCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR TCA 90 bp GTGACTGTGGCCTCTGCCCAGTTCTTAAAAGGCAGAAGCTCCCTGAGGGCAGGGCACCTGCCCGATGGCTaGGAGCCAGCCTCACGGTCA +
Preference number: 4 (lower is better)
Translates to: VTVASAQFLKGRSSLRAGHLPDG*EPASRS
Trigger: TGACCGTGAGGCTGGCTCTCAGCCATCGGGCAGGTG...CCCTGCCCTCAGGGAGCTTCTGCCTTTTAAGAACTGGGCAGAGGCCACAGTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR TCA 90 bp GTGACTGTGGCCTCTGCCCAGTTCTTAAAAGGCAGAAGCTCCCTGAGGGCAGGGGCCCCGGAGGAACCCTaGAGGCACATGTCCACCAGG +
Preference number: 4 (lower is better)
Translates to: VTVASAQFLKGRSSLRAGAPEEP*RHMSTR
Trigger: CCTGGTGGACATGTGCCTTCAGGGTTCCTCCGGGGC...CCCTGCCCTCAGGGAGCTTCTGCCTTTTAAGAACTGGGCAGAGGCCACAGTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR TCA 90 bp GGCCCAGCCTGGGGTTGGCCCCAGATGGAATATCTTCCACACCCGCCCGCTTCTACACACACAGCCCTTTaGACCCAGCACTGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: GPAWGWPQMEYLPHPPASTHTAL*TQHWPE
Trigger: CTCAGGCCAGTGCTGGGTTCAAAGGGCTGTGTGTGT...AGAAGCGGGCGGGTGTGGAAGATATTCCATCTGGGGCCAACCCCAGGCTGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR TCA 90 bp CTGCCAAGGCTGCAGTTCCAGGTACCGGGGTGCACCTTAGGAGCCCTGTGGGCTAGGGGCAGCCTTCCTTaGTCCACAGCCAACCCTTCT +
Preference number: 4 (lower is better)
Translates to: LPRLQFQVPGCTLGALWARGSLP*STANPS
Trigger: AGAAGGGTTGGCTGTGGATCAAGGAAGGCTGCCCCT...AGCCCACAGGGCTCCTAAGGTGCACCCCGGTACCTGGAACTGCAGCCTTGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR TCA 90 bp GTGGGCTTCTTCAGAAGGCAGGGTGACAGTGGGCGCTGCACCCTAGGCAGCAGTCTGTCTTGTCCCCTCTaGGAATGGCCCAGGCTCCCT +
Preference number: 4 (lower is better)
Translates to: VGFFRRQGDSGRCTLGSSLSCPL*EWPRLP
Trigger: AGGGAGCCTGGGCCATTCTCAGAGGGGACAAGACAG...ACTGCTGCCTAGGGTGCAGCGCCCACTGTCACCCTGCCTTCTGAAGAAGCCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000540581.5
ENST00000542192.5
ENST00000627083.2
ENST00000630997.2
CDS-3UTR GCA 90 bp CAGCAGGAGCACCTGAGTGGGGCTGAGGTCAGACCCACTAACCCACTAATGGGGCTGAGCTGCTCATGGTaGCACCGTCAGGCGCAGCTC +
Preference number: 4 (lower is better)
Translates to: QQEHLSGAEVRPTNPLMGLSCSW*HRQAQL
Trigger: GAGCTGCGCCTGACGGTGGCACCATGAGCAGCTCAG...CCCCATTAGTGGGTTAGTGGGTCTGACCTCAGCCCCACTCAGGTGCTCCTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR GCA 90 bp GGGTTGGCCCCAGATGGAATATCTTCCACACCCGCCCGCTTCTGCCAAACCCCACTGAGCTGCTCATGGTaGCACCGTCAGGCGCAGCTC +
Preference number: 4 (lower is better)
Translates to: GLAPDGISSTPARFCQTPLSCSW*HRQAQL
Trigger: GAGCTGCGCCTGACGGTGGCACCATGAGCAGCTCAG...TGGGGTTTGGCAGAAGCGGGCGGGTGTGGAAGATATTCCATCTGGGGCCAACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR GCA 90 bp CGCAGATGGGCCCGAGAGGTGTTCCTGGGAAACAGTTCACTTAGCAAGACCCAGGTCATGCCCTCTTCCTaGGCGGGCGGCGCAGAGCTG +
Preference number: 4 (lower is better)
Translates to: RRWAREVFLGNSSLSKTQVMPSS*AGGAEL
Trigger: CAGCTCTGCGCCGCCCGCGCAGGAAGAGGGCATGAC...CTGGGTCTTGCTAAGTGAACTGTTTCCCAGGAACACCTCTCGGGCCCATCTGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR GCA 90 bp AGGCAGCCCTGTCTGTGGTGTGAGATCTGCAGACCCACCCAGCAGAGGAGTAGGGATCGCGCAAGAGACTaGCCCCAGCACCCCAGACAG +
Preference number: 4 (lower is better)
Translates to: RQPCLWCEICRPTQQRSRDRARD*PQHPRQ
Trigger: CTGTCTGGGGTGCTGGGGGCAGTCTCTTGCGCGATC...CCTACTCCTCTGCTGGGTGGGTCTGCAGATCTCACACCACAGACAGGGCTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR GCA 90 bp GCAGTTCCAGGTACCGGGGTGCACCTTAGGAGCCCTGTGGGCTTCTTCAGAAGGCAAAGGCGATGGCGTTaGCCAGCAGCGTGGTCAGGG +
Preference number: 4 (lower is better)
Translates to: AVPGTGVHLRSPVGFFRRQRRWR*PAAWSG
Trigger: CCCTGACCACGCTGCTGGGCAACGCCATCGCCTTTG...CCTTCTGAAGAAGCCCACAGGGCTCCTAAGGTGCACCCCGGTACCTGGAACTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR GCA 90 bp AAGCTCAGCGCAGGCCCAGCCTGGGGTTGGCCCCAGATGGAATATCTTCCACACCAAAGGCGATGGCGTTaGCCAGCAGCGTGGTCAGGG +
Preference number: 4 (lower is better)
Translates to: KLSAGPAWGWPQMEYLPHQRRWR*PAAWSG
Trigger: CCCTGACCACGCTGCTGGGCAACGCCATCGCCTTTG...GTGTGGAAGATATTCCATCTGGGGCCAACCCCAGGCTGGGCCTGCGCTGAGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR GCA 90 bp AGGCAGCCCTGTCTGTGGTGTGAGATCTGCAGACCCACCCAGCAGAGGAGTAGGCAAAGGCGATGGCGTTaGCCAGCAGCGTGGTCAGGG +
Preference number: 4 (lower is better)
Translates to: RQPCLWCEICRPTQQRSRQRRWR*PAAWSG
Trigger: CCCTGACCACGCTGCTGGGCAACGCCATCGCCTTTG...CCTACTCCTCTGCTGGGTGGGTCTGCAGATCTCACACCACAGACAGGGCTGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR GCA 90 bp GGGTTGGCCCCAGATGGAATATCTTCCACACCCGCCCGCTTCTGCCAAACCCCACAAAGGCGATGGCGTTaGCCAGCAGCGTGGTCAGGG +
Preference number: 4 (lower is better)
Translates to: GLAPDGISSTPARFCQTPQRRWR*PAAWSG
Trigger: CCCTGACCACGCTGCTGGGCAACGCCATCGCCTTTG...TGGGGTTTGGCAGAAGCGGGCGGGTGTGGAAGATATTCCATCTGGGGCCAACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR GCA 90 bp GTGGGCTTCTTCAGAAGGCAGGGTGACAGTGGGCGCTGCACCCTAGGCAGCAGTTCCTCATCCGCCTGCTaGCTCTGCTGCTGGATCCTG +
Preference number: 4 (lower is better)
Translates to: VGFFRRQGDSGRCTLGSSSSSAC*LCCWIL
Trigger: CAGGATCCAGCAGCAGAGGCAGCAGGCGGATGAGGA...ACTGCTGCCTAGGGTGCAGCGCCCACTGTCACCCTGCCTTCTGAAGAAGCCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR GCA 90 bp GCCTGGGGTTGGCCCCAGATGGAATATCTTCCACACCCGCCCGCTTCTGCCAAACCCCTCTCCAGGCTGTaGCTCAGCGTGGACAGTCCA +
Preference number: 4 (lower is better)
Translates to: AWGWPQMEYLPHPPASAKPLSRL*LSVDSP
Trigger: TGGACTGTCCACGCTGAGGCACAGCCTGGAGAGGGG...TTTGGCAGAAGCGGGCGGGTGTGGAAGATATTCCATCTGGGGCCAACCCCAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR GCA 90 bp GGGGTTGGCCCCAGATGGAATATCTTCCACACCCGCCCGCTTCTGCCAAACCCCAGGTGTAGGGACACGTaGAAAGGCCCCTCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: GVGPRWNIFHTRPLLPNPRCRDT*KGPSPG
Trigger: GCCTGGAGAGGGGCCTTTGCACGTGTCCCTACACCT...GGGGTTTGGCAGAAGCGGGCGGGTGTGGAAGATATTCCATCTGGGGCCAACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR GCA 90 bp GTGGGCTTCTTCAGAAGGCAGGGTGACAGTGGGCGCTGCACCCTAGGCAGCAGTAGCTGCTGCAGGCTCTaGCTCAAGTCCAGCAGCCCA +
Preference number: 4 (lower is better)
Translates to: VGFFRRQGDSGRCTLGSSSCCRL*LKSSSP
Trigger: TGGGCTGCTGGACTTGAGGCAGAGCCTGCAGCAGCT...ACTGCTGCCTAGGGTGCAGCGCCCACTGTCACCCTGCCTTCTGAAGAAGCCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR GCA 90 bp GCCACTCCCAGCCTCAGACGCAGATGGGCCCGAGAGGTGTTCCTGGGAAACAGTAGCTGCTGCAGGCTCTaGCTCAAGTCCAGCAGCCCA +
Preference number: 4 (lower is better)
Translates to: ATPSLRRRWAREVFLGNSSCCRL*LKSSSP
Trigger: TGGGCTGCTGGACTTGAGGCAGAGCCTGCAGCAGCT...ACTGTTTCCCAGGAACACCTCTCGGGCCCATCTGCGTCTGAGGCTGGGAGTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR GCA 90 bp GGCTGTGCCTCAGCGTGGACAGTCCAGGCCTCACTTGGACCCACACAGAGCCAGTGTCCACACAGCTGCTaGAGGCTCTGCCTCAAGTCC +
Preference number: 4 (lower is better)
Translates to: GCASAWTVQASLGPTQSQCPHSC*RLCLKS
Trigger: GGACTTGAGGCAGAGCCTGCAGCAGCTGTGTGGACA...CTGGCTCTGTGTGGGTCCAAGTGAGGCCTGGACTGTCCACGCTGAGGCACAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000625979.2
ENST00000629431.2
CDS-3UTR GCA 90 bp CTGCCAAGGCTGCAGTTCCAGGTACCGGGGTGCACCTTAGGAGCCCTGTGGGCTTGTCCACACAGCTGCTaGAGGCTCTGCCTCAAGTCC +
Preference number: 4 (lower is better)
Translates to: LPRLQFQVPGCTLGALWACPHSC*RLCLKS
Trigger: GGACTTGAGGCAGAGCCTGCAGCAGCTGTGTGGACA...AGCCCACAGGGCTCCTAAGGTGCACCCCGGTACCTGGAACTGCAGCCTTGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR GCA 90 bp CCACCCAGCTGTCCAGTCACTGCCAAGGCTGCAGTTCCAGGTACCGGGGTGCACTGTCCACACAGCTGCTaGAGGCTCTGCCTCAAGTCC +
Preference number: 4 (lower is better)
Translates to: PPSCPVTAKAAVPGTGVHCPHSC*RLCLKS
Trigger: GGACTTGAGGCAGAGCCTGCAGCAGCTGTGTGGACA...GTGCACCCCGGTACCTGGAACTGCAGCCTTGGCAGTGACTGGACAGCTGGGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR GCA 90 bp GGCTGTGCCTCAGCGTGGACAGTCCAGGCCTCACTTGGACCCACACAGAGCCAGATCTCCAGGGGAAGCTaGTCCCAGGTCACAGCAGGT +
Preference number: 4 (lower is better)
Translates to: GCASAWTVQASLGPTQSQISRGS*SQVTAG
Trigger: ACCTGCTGTGACCTGGGAGCAGCTTCCCCTGGAGAT...CTGGCTCTGTGTGGGTCCAAGTGAGGCCTGGACTGTCCACGCTGAGGCACAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000625979.2
ENST00000629431.2
CDS-3UTR GCA 90 bp CTGCCAAGGCTGCAGTTCCAGGTACCGGGGTGCACCTTAGGAGCCCTGTGGGCTATCTCCAGGGGAAGCTaGTCCCAGGTCACAGCAGGT +
Preference number: 4 (lower is better)
Translates to: LPRLQFQVPGCTLGALWAISRGS*SQVTAG
Trigger: ACCTGCTGTGACCTGGGAGCAGCTTCCCCTGGAGAT...AGCCCACAGGGCTCCTAAGGTGCACCCCGGTACCTGGAACTGCAGCCTTGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR GCA 90 bp GTGACTGTGGCCTCTGCCCAGTTCTTAAAAGGCAGAAGCTCCCTGAGGGCAGGGGCAGCAGTGGGAGGTTaGTGGCAGCGGCAGGCTGTC +
Preference number: 4 (lower is better)
Translates to: VTVASAQFLKGRSSLRAGAAVGG*WQRQAV
Trigger: GACAGCCTGCCGCTGCCAGCAACCTCCCACTGCTGC...CCCTGCCCTCAGGGAGCTTCTGCCTTTTAAGAACTGGGCAGAGGCCACAGTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR GCA 90 bp GTGACTGTGGCCTCTGCCCAGTTCTTAAAAGGCAGAAGCTCCCTGAGGGCAGGGGGTGACAGTGGGCGCTaGACCCTAGGCAGCAGTGGG +
Preference number: 4 (lower is better)
Translates to: VTVASAQFLKGRSSLRAGGDSGR*TLGSSG
Trigger: CCCACTGCTGCCTAGGGTGCAGCGCCCACTGTCACC...CCCTGCCCTCAGGGAGCTTCTGCCTTTTAAGAACTGGGCAGAGGCCACAGTCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR GCA 90 bp GCCACTCCCAGCCTCAGACGCAGATGGGCCCGAGAGGTGTTCCTGGGAAACAGTTTCCAGGTACCGGGGTaGACCTTAGGAGCCCTGTGG +
Preference number: 4 (lower is better)
Translates to: ATPSLRRRWAREVFLGNSFQVPG*TLGALW
Trigger: CCACAGGGCTCCTAAGGTGCACCCCGGTACCTGGAA...ACTGTTTCCCAGGAACACCTCTCGGGCCCATCTGCGTCTGAGGCTGGGAGTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR GCA 90 bp GGCCCAGCCTGGGGTTGGCCCCAGATGGAATATCTTCCACACCCGCCCGCTTCTAGTCACTGCCAAGGCTaGAGTTCCAGGTACCGGGGT +
Preference number: 4 (lower is better)
Translates to: GPAWGWPQMEYLPHPPASSHCQG*SSRYRG
Trigger: ACCCCGGTACCTGGAACTGCAGCCTTGGCAGTGACT...AGAAGCGGGCGGGTGTGGAAGATATTCCATCTGGGGCCAACCCCAGGCTGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR GCA 90 bp GGGGTTGGCCCCAGATGGAATATCTTCCACACCCGCCCGCTTCTGCCAAACCCCGTGCCAGGGAGAGCCTaGTCTCCCCACTTCCTTAGC +
Preference number: 4 (lower is better)
Translates to: GVGPRWNIFHTRPLLPNPVPGRA*SPHFLS
Trigger: GCTAAGGAAGTGGGGAGAGCAGGCTCTCCCTGGCAC...GGGGTTTGGCAGAAGCGGGCGGGTGTGGAAGATATTCCATCTGGGGCCAACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR GCA 90 bp GCTGTGGCTGATGTTGACGGGGCCACACCAGGGAGAGGGTGGGCACCCTCGGTGGGTGACTGTGGCCTCTaGCCAGTTCTTAAAAGGCAG +
Preference number: 4 (lower is better)
Translates to: AVADVDGATPGRGWAPSVGDCGL*PVLKRQ
Trigger: CTGCCTTTTAAGAACTGGGCAGAGGCCACAGTCACC...CACCGAGGGTGCCCACCCTCTCCCTGGTGTGGCCCCGTCAACATCAGCCACAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR GCA 90 bp GGCTGTGCCTCAGCGTGGACAGTCCAGGCCTCACTTGGACCCACACAGAGCCAGGAGGGAATATGGGGGTaGACATCCTGGGCACCAGCT +
Preference number: 4 (lower is better)
Translates to: GCASAWTVQASLGPTQSQEGIWG*TSWAPA
Trigger: AGCTGGTGCCCAGGATGTGCACCCCCATATTCCCTC...CTGGCTCTGTGTGGGTCCAAGTGAGGCCTGGACTGTCCACGCTGAGGCACAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000625979.2
ENST00000629431.2
CDS-3UTR GCA 90 bp GCCTGGGGTTGGCCCCAGATGGAATATCTTCCACACCCGCCCGCTTCTGCCAAAACACCCGCCCGCTTCTaGCAAACCCCACCTGGGCTA +
Preference number: 4 (lower is better)
Translates to: AWGWPQMEYLPHPPASAKTPARF*QTPPGL
Trigger: TAGCCCAGGTGGGGTTTGGCAGAAGCGGGCGGGTGT...TTTGGCAGAAGCGGGCGGGTGTGGAAGATATTCCATCTGGGGCCAACCCCAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR GCA 90 bp GGGTTGGCCCCAGATGGAATATCTTCCACACCCGCCCGCTTCTGCCAAACCCCAACACCCGCCCGCTTCTaGCAAACCCCACCTGGGCTA +
Preference number: 4 (lower is better)
Translates to: GLAPDGISSTPARFCQTPTPARF*QTPPGL
Trigger: TAGCCCAGGTGGGGTTTGGCAGAAGCGGGCGGGTGT...TGGGGTTTGGCAGAAGCGGGCGGGTGTGGAAGATATTCCATCTGGGGCCAACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR GCA 90 bp GTCACTGCCAAGGCTGCAGTTCCAGGTACCGGGGTGCACCTTAGGAGCCCTGTGGCAAGACCCAGTACCTaGGCTCCAGAAGCTCAGCGC +
Preference number: 4 (lower is better)
Translates to: VTAKAAVPGTGVHLRSPVARPST*APEAQR
Trigger: GCGCTGAGCTTCTGGAGCGCAGGTACTGGGTCTTGC...CACAGGGCTCCTAAGGTGCACCCCGGTACCTGGAACTGCAGCCTTGGCAGTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR GCA 90 bp GGGGTTGGCCCCAGATGGAATATCTTCCACACCCGCCCGCTTCTGCCAAACCCCACTCCTGGCCTCAGATaGCACTCCCGGCCTCAGATG +
Preference number: 4 (lower is better)
Translates to: GVGPRWNIFHTRPLLPNPTPGLR*HSRPQM
Trigger: CATCTGAGGCCGGGAGTGGCATCTGAGGCCAGGAGT...GGGGTTTGGCAGAAGCGGGCGGGTGTGGAAGATATTCCATCTGGGGCCAACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR GCA 90 bp GCCACTCCCAGCCTCAGACGCAGATGGGCCCGAGAGGTGTTCCTGGGAAACAGTAGGGCCTTCCACCTCTaGATCCAGCCATGCACCCAC +
Preference number: 4 (lower is better)
Translates to: ATPSLRRRWAREVFLGNSRAFHL*IQPCTH
Trigger: GTGGGTGCATGGCTGGATGCAGAGGTGGAAGGCCCT...ACTGTTTCCCAGGAACACCTCTCGGGCCCATCTGCGTCTGAGGCTGGGAGTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR GCA 90 bp CCACCCAGCTGTCCAGTCACTGCCAAGGCTGCAGTTCCAGGTACCGGGGTGCACCCAGGACTGCACAGCTaGAGACTTGCTGGGAACCTG +
Preference number: 4 (lower is better)
Translates to: PPSCPVTAKAAVPGTGVHPGLHS*RLAGNL
Trigger: CAGGTTCCCAGCAAGTCTGCAGCTGTGCAGTCCTGG...GTGCACCCCGGTACCTGGAACTGCAGCCTTGGCAGTGACTGGACAGCTGGGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR GCA 90 bp GTCACTGCCAAGGCTGCAGTTCCAGGTACCGGGGTGCACCTTAGGAGCCCTGTGCAGGGACCCCAGGACTaGACAGCTGCAGACTTGCTG +
Preference number: 4 (lower is better)
Translates to: VTAKAAVPGTGVHLRSPVQGPQD*TAADLL
Trigger: CAGCAAGTCTGCAGCTGTGCAGTCCTGGGGTCCCTG...CACAGGGCTCCTAAGGTGCACCCCGGTACCTGGAACTGCAGCCTTGGCAGTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR GCA 90 bp GAAGCTCAGCGCAGGCCCAGCCTGGGGTTGGCCCCAGATGGAATATCTTCCACATGGGCCAGCGGCTCCTaGCTGGCTTCCACACTCACA +
Preference number: 4 (lower is better)
Translates to: EAQRRPSLGLAPDGISSTWASGS*LASTLT
Trigger: TGTGAGTGTGGAAGCCAGGCAGGAGCCGCTGGCCCA...TGTGGAAGATATTCCATCTGGGGCCAACCCCAGGCTGGGCCTGCGCTGAGCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000625979.2
ENST00000629431.2
CDS-3UTR GCA 90 bp GTCACTGCCAAGGCTGCAGTTCCAGGTACCGGGGTGCACCTTAGGAGCCCTGTGCCTGGGATGCTGGGCTaGGAAGGAACCAGCCTCAGT +
Preference number: 4 (lower is better)
Translates to: VTAKAAVPGTGVHLRSPVPGMLG*EGTSLS
Trigger: ACTGAGGCTGGTTCCTTCGCAGCCCAGCATCCCAGG...CACAGGGCTCCTAAGGTGCACCCCGGTACCTGGAACTGCAGCCTTGGCAGTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000540581.5
ENST00000542192.5
ENST00000627083.2
ENST00000630997.2
CDS-3UTR GCA 90 bp GGCCCAGCCTGGGGTTGGCCCCAGATGGAATATCTTCCACACCCGCCCGCTTCTTTCCCCAGAGACAACTaGTGGGGTGGCAAAGGCCTG +
Preference number: 4 (lower is better)
Translates to: GPAWGWPQMEYLPHPPASFPRDN*WGGKGL
Trigger: CAGGCCTTTGCCACCCCAGCAGTTGTCTCTGGGGAA...AGAAGCGGGCGGGTGTGGAAGATATTCCATCTGGGGCCAACCCCAGGCTGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000540581.5
ENST00000542192.5
ENST00000627083.2
ENST00000630997.2
CDS-3UTR CCA 90 bp GCCACTCCCAGCCTCAGACGCAGATGGGCCCGAGAGGTGTTCCTGGGAAACAGTCGGCGCGCTGCCTTGTaGGAGAGGGAGCATATTAGC +
Preference number: 4 (lower is better)
Translates to: ATPSLRRRWAREVFLGNSRRAAL*EREHIS
Trigger: GCTAATATGCTCCCTCTCCCACAAGGCAGCGCGCCG...ACTGTTTCCCAGGAACACCTCTCGGGCCCATCTGCGTCTGAGGCTGGGAGTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000291722.11
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000630997.2
CDS-3UTR CCA 90 bp GAAGCTCAGCGCAGGCCCAGCCTGGGGTTGGCCCCAGATGGAATATCTTCCACACACCTGAGCTGCTCATaGTGCCACCGTCAGGCGCAG +
Preference number: 4 (lower is better)
Translates to: EAQRRPSLGLAPDGISSTHLSCS*CHRQAQ
Trigger: CTGCGCCTGACGGTGGCACCATGAGCAGCTCAGGTG...TGTGGAAGATATTCCATCTGGGGCCAACCCCAGGCTGGGCCTGCGCTGAGCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR CCA 90 bp CAGCAGGAGCACCTGAGTGGGGCTGAGGTCAGACCCACTAACCCACTAATGGGGCACCTGAGCTGCTCATaGTGCCACCGTCAGGCGCAG +
Preference number: 4 (lower is better)
Translates to: QQEHLSGAEVRPTNPLMGHLSCS*CHRQAQ
Trigger: CTGCGCCTGACGGTGGCACCATGAGCAGCTCAGGTG...CCCCATTAGTGGGTTAGTGGGTCTGACCTCAGCCCCACTCAGGTGCTCCTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR CCA 90 bp GTACCGGGGTGCACCTTAGGAGCCCTGTGGGCTTCTTCAGAAGGCAGGGTGACACACCTGAGCTGCTCATaGTGCCACCGTCAGGCGCAG +
Preference number: 4 (lower is better)
Translates to: VPGCTLGALWASSEGRVTHLSCS*CHRQAQ
Trigger: CTGCGCCTGACGGTGGCACCATGAGCAGCTCAGGTG...TGTCACCCTGCCTTCTGAAGAAGCCCACAGGGCTCCTAAGGTGCACCCCGGTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR CCA 90 bp GCCCGCTTCTGCCAAACCCCACCTGGGCTAAGCCAGGCCCGACCAGGCACCTGCTGGCTTAAGCCAGTCTaGAGAAAGGAGCAGAGGACT +
Preference number: 4 (lower is better)
Translates to: ARFCQTPPGLSQARPGTCWLKPV*RKEQRT
Trigger: AGTCCTCTGCTCCTTTCTCCAGACTGGCTTAAGCCA...GCAGGTGCCTGGTCGGGCCTGGCTTAGCCCAGGTGGGGTTTGGCAGAAGCGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR CCA 90 bp GAAGCTCAGCGCAGGCCCAGCCTGGGGTTGGCCCCAGATGGAATATCTTCCACACGAGGGGCCTTGAGGTaGCCTGTCCAAGGTTCCCAG +
Preference number: 4 (lower is better)
Translates to: EAQRRPSLGLAPDGISSTRGALR*PVQGSQ
Trigger: CTGGGAACCTTGGACAGGCCACCTCAAGGCCCCTCG...TGTGGAAGATATTCCATCTGGGGCCAACCCCAGGCTGGGCCTGCGCTGAGCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR CCA 90 bp AGGCAGCCCTGTCTGTGGTGTGAGATCTGCAGACCCACCCAGCAGAGGAGTAGGCGAGGGGCCTTGAGGTaGCCTGTCCAAGGTTCCCAG +
Preference number: 4 (lower is better)
Translates to: RQPCLWCEICRPTQQRSRRGALR*PVQGSQ
Trigger: CTGGGAACCTTGGACAGGCCACCTCAAGGCCCCTCG...CCTACTCCTCTGCTGGGTGGGTCTGCAGATCTCACACCACAGACAGGGCTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR CCA 90 bp GAGGTGACTGTGGCCTCTGCCCAGTTCTTAAAAGGCAGAAGCTCCCTGAGGGCATGGCTCCGGACAGCCTaGCACCCAGGGCAGTGGGGA +
Preference number: 4 (lower is better)
Translates to: EVTVASAQFLKGRSSLRAWLRTA*HPGQWG
Trigger: TCCCCACTGCCCTGGGTGCCAGGCTGTCCGGAGCCA...TGCCCTCAGGGAGCTTCTGCCTTTTAAGAACTGGGCAGAGGCCACAGTCACCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR CCA 90 bp GCAGTTCCAGGTACCGGGGTGCACCTTAGGAGCCCTGTGGGCTTCTTCAGAAGGTCTCTGCATCCTCCCTaGGTAGGCCTGGCTCCGGAC +
Preference number: 4 (lower is better)
Translates to: AVPGTGVHLRSPVGFFRRSLHPP*VGLAPD
Trigger: GTCCGGAGCCAGGCCTACCCAGGGAGGATGCAGAGA...CCTTCTGAAGAAGCCCACAGGGCTCCTAAGGTGCACCCCGGTACCTGGAACTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR CCA 90 bp CAGCAGGAGCACCTGAGTGGGGCTGAGGTCAGACCCACTAACCCACTAATGGGGTCTCTGCATCCTCCCTaGGTAGGCCTGGCTCCGGAC +
Preference number: 4 (lower is better)
Translates to: QQEHLSGAEVRPTNPLMGSLHPP*VGLAPD
Trigger: GTCCGGAGCCAGGCCTACCCAGGGAGGATGCAGAGA...CCCCATTAGTGGGTTAGTGGGTCTGACCTCAGCCCCACTCAGGTGCTCCTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR CCA 90 bp GCCACTCCCAGCCTCAGACGCAGATGGGCCCGAGAGGTGTTCCTGGGAAACAGTTGGGGGTGCACATCCTaGGCACCAGCTCTCTGCATC +
Preference number: 4 (lower is better)
Translates to: ATPSLRRRWAREVFLGNSWGCTS*APALCI
Trigger: GATGCAGAGAGCTGGTGCCCAGGATGTGCACCCCCA...ACTGTTTCCCAGGAACACCTCTCGGGCCCATCTGCGTCTGAGGCTGGGAGTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR CCA 90 bp CTGCCAAGGCTGCAGTTCCAGGTACCGGGGTGCACCTTAGGAGCCCTGTGGGCTGGGGTTGGCCCCAGATaGAATATCTTCCACACCCGC +
Preference number: 4 (lower is better)
Translates to: LPRLQFQVPGCTLGALWAGVGPR*NIFHTR
Trigger: GCGGGTGTGGAAGATATTCCATCTGGGGCCAACCCC...AGCCCACAGGGCTCCTAAGGTGCACCCCGGTACCTGGAACTGCAGCCTTGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR CCA 90 bp GTCACTGCCAAGGCTGCAGTTCCAGGTACCGGGGTGCACCTTAGGAGCCCTGTGAGCCTCAGACGCAGATaGGCCCGAGAGGTGTTCCTG +
Preference number: 4 (lower is better)
Translates to: VTAKAAVPGTGVHLRSPVSLRRR*AREVFL
Trigger: CAGGAACACCTCTCGGGCCCATCTGCGTCTGAGGCT...CACAGGGCTCCTAAGGTGCACCCCGGTACCTGGAACTGCAGCCTTGGCAGTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR CCA 90 bp AAGCTCAGCGCAGGCCCAGCCTGGGGTTGGCCCCAGATGGAATATCTTCCACACCCAGACTCCCAGGGGTaGGATGCTGCTGACCCAGGA +
Preference number: 4 (lower is better)
Translates to: KLSAGPAWGWPQMEYLPHPDSQG*DAADPG
Trigger: TCCTGGGTCAGCAGCATCCCACCCCTGGGAGTCTGG...GTGTGGAAGATATTCCATCTGGGGCCAACCCCAGGCTGGGCCTGCGCTGAGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR CCA 90 bp GAAGCTCAGCGCAGGCCCAGCCTGGGGTTGGCCCCAGATGGAATATCTTCCACACCAGACTCCCAGGGGTaGGATGCTGCTGACCCAGGA +
Preference number: 4 (lower is better)
Translates to: EAQRRPSLGLAPDGISSTPDSQG*DAADPG
Trigger: TCCTGGGTCAGCAGCATCCCACCCCTGGGAGTCTGG...TGTGGAAGATATTCCATCTGGGGCCAACCCCAGGCTGGGCCTGCGCTGAGCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR CCA 90 bp GCCTGGGGTTGGCCCCAGATGGAATATCTTCCACACCCGCCCGCTTCTGCCAAACCAGACTCCCAGGGGTaGGATGCTGCTGACCCAGGA +
Preference number: 4 (lower is better)
Translates to: AWGWPQMEYLPHPPASAKPDSQG*DAADPG
Trigger: TCCTGGGTCAGCAGCATCCCACCCCTGGGAGTCTGG...TTTGGCAGAAGCGGGCGGGTGTGGAAGATATTCCATCTGGGGCCAACCCCAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR CCA 90 bp GTACCGGGGTGCACCTTAGGAGCCCTGTGGGCTTCTTCAGAAGGCAGGGTGACACCAGACTCCCAGGGGTaGGATGCTGCTGACCCAGGA +
Preference number: 4 (lower is better)
Translates to: VPGCTLGALWASSEGRVTPDSQG*DAADPG
Trigger: TCCTGGGTCAGCAGCATCCCACCCCTGGGAGTCTGG...TGTCACCCTGCCTTCTGAAGAAGCCCACAGGGCTCCTAAGGTGCACCCCGGTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR CCA 90 bp CCCGAGAGGTGTTCCTGGGAAACAGTTCACTTAGCAAGACCCAGTACCTGCGCTGGACAGCACGCCCCCTaGGCGACAGGGTCAGGGACC +
Preference number: 4 (lower is better)
Translates to: PERCSWETVHLARPSTCAGQHAP*ATGSGT
Trigger: GGTCCCTGACCCTGTCGCCCAGGGGGCGTGCTGTCC...AGCGCAGGTACTGGGTCTTGCTAAGTGAACTGTTTCCCAGGAACACCTCTCGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR CCA 90 bp AGGCACGCGAGCCACGGCCACGCTTTATTGCTTAAGACGCACACAGAACACAGAGGACAGCACGCCCCCTaGGCGACAGGGTCAGGGACC +
Preference number: 4 (lower is better)
Translates to: RHASHGHALLLKTHTEHRGQHAP*ATGSGT
Trigger: GGTCCCTGACCCTGTCGCCCAGGGGGCGTGCTGTCC...TCTGTGTTCTGTGTGCGTCTTAAGCAATAAAGCGTGGCCGTGGCTCGCGTGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR CCA 90 bp TTGTGGGAGGTAGACAGGTCTCACTGCATACATGGGACAGATGTGTGCACCCACAGGCAGGGCCCCTGCTaGACAGCACGCCCCCTGGGC +
Preference number: 4 (lower is better)
Translates to: LWEVDRSHCIHGTDVCTHRQGPC*TARPLG
Trigger: GCCCAGGGGGCGTGCTGTCCAGCAGGGGCCCTGCCT...GTGGGTGCACACATCTGTCCCATGTATGCAGTGAGACCTGTCTACCTCCCACAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR CCA 90 bp GGGGTTGGCCCCAGATGGAATATCTTCCACACCCGCCCGCTTCTGCCAAACCCCCCAGCGGCTCCTGCCTaGCTTCCACACTCACACACA +
Preference number: 4 (lower is better)
Translates to: GVGPRWNIFHTRPLLPNPPAAPA*LPHSHT
Trigger: TGTGTGTGAGTGTGGAAGCCAGGCAGGAGCCGCTGG...GGGGTTTGGCAGAAGCGGGCGGGTGTGGAAGATATTCCATCTGGGGCCAACCCC
62% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000625979.2
ENST00000629431.2
CDS-3UTR CCA 90 bp CGTGGACAGTCCAGGCCTCACTTGGACCCACACAGAGCCAGAAGAGGGGACAGGCCAGCGGCTCCTGCCTaGCTTCCACACTCACACACA +
Preference number: 4 (lower is better)
Translates to: RGQSRPHLDPHRARRGDRPAAPA*LPHSHT
Trigger: TGTGTGTGAGTGTGGAAGCCAGGCAGGAGCCGCTGG...CCTGTCCCCTCTTCTGGCTCTGTGTGGGTCCAAGTGAGGCCTGGACTGTCCACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000625979.2
ENST00000629431.2
CDS-3UTR TCA 90 bp CAGCAGGAGCACCTGAGTGGGGCTGAGGTCAGACCCACTAACCCACTAATGGGGGCCCTGTCTGTGGTGTaGGATCTGCAGACCCACCCA +
Preference number: 4 (lower is better)
Translates to: QQEHLSGAEVRPTNPLMGALSVV*DLQTHP
Trigger: TGGGTGGGTCTGCAGATCTCACACCACAGACAGGGC...CCCCATTAGTGGGTTAGTGGGTCTGACCTCAGCCCCACTCAGGTGCTCCTGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR TCA 90 bp CGCAGATGGGCCCGAGAGGTGTTCCTGGGAAACAGTTCACTTAGCAAGACCCAGGCAGCCGAGGGGCCTTaGGGTGGCCTGTCCAAGGTT +
Preference number: 4 (lower is better)
Translates to: RRWAREVFLGNSSLSKTQAAEGP*GGLSKV
Trigger: AACCTTGGACAGGCCACCTCAAGGCCCCTCGGCTGC...CTGGGTCTTGCTAAGTGAACTGTTTCCCAGGAACACCTCTCGGGCCCATCTGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR TCA 90 bp GAGGTGACTGTGGCCTCTGCCCAGTTCTTAAAAGGCAGAAGCTCCCTGAGGGCAAAGGCAGAAGCTCCCTaGGGGCAGGGCTTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: EVTVASAQFLKGRSSLRAKAEAP*GQGLGR
Trigger: CCTGCCCAAGCCCTGCCCTCAGGGAGCTTCTGCCTT...TGCCCTCAGGGAGCTTCTGCCTTTTAAGAACTGGGCAGAGGCCACAGTCACCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR TCA 90 bp GTGACTGTGGCCTCTGCCCAGTTCTTAAAAGGCAGAAGCTCCCTGAGGGCAGGGCTCTGTGTGGGGAGGTaGCTGTGGCCTCTGCCCAGT +
Preference number: 4 (lower is better)
Translates to: VTVASAQFLKGRSSLRAGLCVGR*LWPLPS
Trigger: ACTGGGCAGAGGCCACAGTCACCTCCCCACACAGAG...CCCTGCCCTCAGGGAGCTTCTGCCTTTTAAGAACTGGGCAGAGGCCACAGTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR TCA 90 bp GGGGTTGGCCCCAGATGGAATATCTTCCACACCCGCCCGCTTCTGCCAAACCCCACACACACAGCCCTTTaGACCCAGCACTGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: GVGPRWNIFHTRPLLPNPTHTAL*TQHWPE
Trigger: CTCAGGCCAGTGCTGGGTTCAAAGGGCTGTGTGTGT...GGGGTTTGGCAGAAGCGGGCGGGTGTGGAAGATATTCCATCTGGGGCCAACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR TCA 90 bp GCCACTCCCAGCCTCAGACGCAGATGGGCCCGAGAGGTGTTCCTGGGAAACAGTACACACACAGCCCTTTaGACCCAGCACTGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: ATPSLRRRWAREVFLGNSTHTAL*TQHWPE
Trigger: CTCAGGCCAGTGCTGGGTTCAAAGGGCTGTGTGTGT...ACTGTTTCCCAGGAACACCTCTCGGGCCCATCTGCGTCTGAGGCTGGGAGTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR TCA 90 bp GAAGCTCAGCGCAGGCCCAGCCTGGGGTTGGCCCCAGATGGAATATCTTCCACAGTCTCTGGCTGTCAGTaGGACCCCTCTGGAAAGGGC +
Preference number: 4 (lower is better)
Translates to: EAQRRPSLGLAPDGISSTVSGCQ*DPSGKG
Trigger: GCCCTTTCCAGAGGGGTCTCACTGACAGCCAGAGAC...TGTGGAAGATATTCCATCTGGGGCCAACCCCAGGCTGGGCCTGCGCTGAGCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR TCA 90 bp CAGCAGGAGCACCTGAGTGGGGCTGAGGTCAGACCCACTAACCCACTAATGGGGGTCTCTGGCTGTCAGTaGGACCCCTCTGGAAAGGGC +
Preference number: 4 (lower is better)
Translates to: QQEHLSGAEVRPTNPLMGVSGCQ*DPSGKG
Trigger: GCCCTTTCCAGAGGGGTCTCACTGACAGCCAGAGAC...CCCCATTAGTGGGTTAGTGGGTCTGACCTCAGCCCCACTCAGGTGCTCCTGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR TCA 90 bp AAGCTCAGCGCAGGCCCAGCCTGGGGTTGGCCCCAGATGGAATATCTTCCACACGTCTCTGGCTGTCAGTaGGACCCCTCTGGAAAGGGC +
Preference number: 4 (lower is better)
Translates to: KLSAGPAWGWPQMEYLPHVSGCQ*DPSGKG
Trigger: GCCCTTTCCAGAGGGGTCTCACTGACAGCCAGAGAC...GTGTGGAAGATATTCCATCTGGGGCCAACCCCAGGCTGGGCCTGCGCTGAGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR TCA 90 bp GTGGGCTTCTTCAGAAGGCAGGGTGACAGTGGGCGCTGCACCCTAGGCAGCAGTAGGGGCAGCCTTCCTTaGTCCACAGCCAACCCTTCT +
Preference number: 4 (lower is better)
Translates to: VGFFRRQGDSGRCTLGSSRGSLP*STANPS
Trigger: AGAAGGGTTGGCTGTGGATCAAGGAAGGCTGCCCCT...ACTGCTGCCTAGGGTGCAGCGCCCACTGTCACCCTGCCTTCTGAAGAAGCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR TCA 90 bp GTCACTGCCAAGGCTGCAGTTCCAGGTACCGGGGTGCACCTTAGGAGCCCTGTGAGGGGCAGCCTTCCTTaGTCCACAGCCAACCCTTCT +
Preference number: 4 (lower is better)
Translates to: VTAKAAVPGTGVHLRSPVRGSLP*STANPS
Trigger: AGAAGGGTTGGCTGTGGATCAAGGAAGGCTGCCCCT...CACAGGGCTCCTAAGGTGCACCCCGGTACCTGGAACTGCAGCCTTGGCAGTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR TCA 90 bp CGCAGATGGGCCCGAGAGGTGTTCCTGGGAAACAGTTCACTTAGCAAGACCCAGGGAACCTGGGACAGGTaGCACGCCCACTCTCGCCTG +
Preference number: 4 (lower is better)
Translates to: RRWAREVFLGNSSLSKTQGTWDR*HAHSRL
Trigger: CAGGCGAGAGTGGGCGTGTCACCTGTCCCAGGTTCC...CTGGGTCTTGCTAAGTGAACTGTTTCCCAGGAACACCTCTCGGGCCCATCTGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR GCA 90 bp AGGCACGCGAGCCACGGCCACGCTTTATTGCTTAAGACGCACACAGAACACAGATCCGAGCCGGCGCGCTaGCTTGTGGGAGAGGGAGCA +
Preference number: 4 (lower is better)
Translates to: RHASHGHALLLKTHTEHRSEPAR*LVGEGA
Trigger: TGCTCCCTCTCCCACAAGGCAGCGCGCCGGCTCGGA...TCTGTGTTCTGTGTGCGTCTTAAGCAATAAAGCGTGGCCGTGGCTCGCGTGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000291722.11
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000630997.2
CDS-3UTR GCA 90 bp CCCGAGAGGTGTTCCTGGGAAACAGTTCACTTAGCAAGACCCAGTACCTGCGCTTCCGAGCCGGCGCGCTaGCTTGTGGGAGAGGGAGCA +
Preference number: 4 (lower is better)
Translates to: PERCSWETVHLARPSTCASEPAR*LVGEGA
Trigger: TGCTCCCTCTCCCACAAGGCAGCGCGCCGGCTCGGA...AGCGCAGGTACTGGGTCTTGCTAAGTGAACTGTTTCCCAGGAACACCTCTCGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000291722.11
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000630997.2
CDS-3UTR GCA 90 bp GGCCCAGCCTGGGGTTGGCCCCAGATGGAATATCTTCCACACCCGCCCGCTTCTTCGCATCGCCCTTTTTaGCCAGAGCAGAGAGTCCGT +
Preference number: 4 (lower is better)
Translates to: GPAWGWPQMEYLPHPPASSHRPF*PEQRVR
Trigger: ACGGACTCTCTGCTCTGGGCAAAAAGGGCGATGCGA...AGAAGCGGGCGGGTGTGGAAGATATTCCATCTGGGGCCAACCCCAGGCTGGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000625979.2
ENST00000629431.2
CDS-3UTR GCA 90 bp GAAGCTCAGCGCAGGCCCAGCCTGGGGTTGGCCCCAGATGGAATATCTTCCACATCCTCATCCGCCTGCTaGCTCTGCTGCTGGATCCTG +
Preference number: 4 (lower is better)
Translates to: EAQRRPSLGLAPDGISSTSSSAC*LCCWIL
Trigger: CAGGATCCAGCAGCAGAGGCAGCAGGCGGATGAGGA...TGTGGAAGATATTCCATCTGGGGCCAACCCCAGGCTGGGCCTGCGCTGAGCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR GCA 90 bp CAGCAGGAGCACCTGAGTGGGGCTGAGGTCAGACCCACTAACCCACTAATGGGGTCCTCATCCGCCTGCTaGCTCTGCTGCTGGATCCTG +
Preference number: 4 (lower is better)
Translates to: QQEHLSGAEVRPTNPLMGSSSAC*LCCWIL
Trigger: CAGGATCCAGCAGCAGAGGCAGCAGGCGGATGAGGA...CCCCATTAGTGGGTTAGTGGGTCTGACCTCAGCCCCACTCAGGTGCTCCTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR GCA 90 bp GCCACTCCCAGCCTCAGACGCAGATGGGCCCGAGAGGTGTTCCTGGGAAACAGTTTCTCCTCATCCGCCTaGTGCCTCTGCTGCTGGATC +
Preference number: 4 (lower is better)
Translates to: ATPSLRRRWAREVFLGNSFSSSA*CLCCWI
Trigger: GATCCAGCAGCAGAGGCAGCAGGCGGATGAGGAGAA...ACTGTTTCCCAGGAACACCTCTCGGGCCCATCTGCGTCTGAGGCTGGGAGTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR GCA 90 bp GTACCGGGGTGCACCTTAGGAGCCCTGTGGGCTTCTTCAGAAGGCAGGGTGACAAGGTGTAGGGACACGTaGAAAGGCCCCTCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: VPGCTLGALWASSEGRVTRCRDT*KGPSPG
Trigger: GCCTGGAGAGGGGCCTTTGCACGTGTCCCTACACCT...TGTCACCCTGCCTTCTGAAGAAGCCCACAGGGCTCCTAAGGTGCACCCCGGTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR GCA 90 bp AGGCAGCCCTGTCTGTGGTGTGAGATCTGCAGACCCACCCAGCAGAGGAGTAGGAGCTGCTGCAGGCTCTaGCTCAAGTCCAGCAGCCCA +
Preference number: 4 (lower is better)
Translates to: RQPCLWCEICRPTQQRSRSCCRL*LKSSSP
Trigger: TGGGCTGCTGGACTTGAGGCAGAGCCTGCAGCAGCT...CCTACTCCTCTGCTGGGTGGGTCTGCAGATCTCACACCACAGACAGGGCTGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR GCA 90 bp GAAGCTCAGCGCAGGCCCAGCCTGGGGTTGGCCCCAGATGGAATATCTTCCACAAGCTGCTGCAGGCTCTaGCTCAAGTCCAGCAGCCCA +
Preference number: 4 (lower is better)
Translates to: EAQRRPSLGLAPDGISSTSCCRL*LKSSSP
Trigger: TGGGCTGCTGGACTTGAGGCAGAGCCTGCAGCAGCT...TGTGGAAGATATTCCATCTGGGGCCAACCCCAGGCTGGGCCTGCGCTGAGCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR GCA 90 bp GCAGTTCCAGGTACCGGGGTGCACCTTAGGAGCCCTGTGGGCTTCTTCAGAAGGAGCTGCTGCAGGCTCTaGCTCAAGTCCAGCAGCCCA +
Preference number: 4 (lower is better)
Translates to: AVPGTGVHLRSPVGFFRRSCCRL*LKSSSP
Trigger: TGGGCTGCTGGACTTGAGGCAGAGCCTGCAGCAGCT...CCTTCTGAAGAAGCCCACAGGGCTCCTAAGGTGCACCCCGGTACCTGGAACTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR GCA 90 bp GCCACTCCCAGCCTCAGACGCAGATGGGCCCGAGAGGTGTTCCTGGGAAACAGTATCTCCAGGGGAAGCTaGTCCCAGGTCACAGCAGGT +
Preference number: 4 (lower is better)
Translates to: ATPSLRRRWAREVFLGNSISRGS*SQVTAG
Trigger: ACCTGCTGTGACCTGGGAGCAGCTTCCCCTGGAGAT...ACTGTTTCCCAGGAACACCTCTCGGGCCCATCTGCGTCTGAGGCTGGGAGTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR GCA 90 bp GTGGGCTTCTTCAGAAGGCAGGGTGACAGTGGGCGCTGCACCCTAGGCAGCAGTATCTCCAGGGGAAGCTaGTCCCAGGTCACAGCAGGT +
Preference number: 4 (lower is better)
Translates to: VGFFRRQGDSGRCTLGSSISRGS*SQVTAG
Trigger: ACCTGCTGTGACCTGGGAGCAGCTTCCCCTGGAGAT...ACTGCTGCCTAGGGTGCAGCGCCCACTGTCACCCTGCCTTCTGAAGAAGCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR GCA 90 bp GAGGTGACTGTGGCCTCTGCCCAGTTCTTAAAAGGCAGAAGCTCCCTGAGGGCAGGTCCCTCTGCTCAGTaGCCAGGTGGCAGGGTCCCA +
Preference number: 4 (lower is better)
Translates to: EVTVASAQFLKGRSSLRAGPSAQ*PGGRVP
Trigger: TGGGACCCTGCCACCTGGGCACTGAGCAGAGGGACC...TGCCCTCAGGGAGCTTCTGCCTTTTAAGAACTGGGCAGAGGCCACAGTCACCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR GCA 90 bp CGCAGATGGGCCCGAGAGGTGTTCCTGGGAAACAGTTCACTTAGCAAGACCCAGTGGGGGAGGTCCCTCTaGTCAGTGCCCAGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: RRWAREVFLGNSSLSKTQWGRSL*SVPRWQ
Trigger: CTGCCACCTGGGCACTGAGCAGAGGGACCTCCCCCA...CTGGGTCTTGCTAAGTGAACTGTTTCCCAGGAACACCTCTCGGGCCCATCTGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR GCA 90 bp CAGCAGGAGCACCTGAGTGGGGCTGAGGTCAGACCCACTAACCCACTAATGGGGTTCCAGGTACCGGGGTaGACCTTAGGAGCCCTGTGG +
Preference number: 4 (lower is better)
Translates to: QQEHLSGAEVRPTNPLMGFQVPG*TLGALW
Trigger: CCACAGGGCTCCTAAGGTGCACCCCGGTACCTGGAA...CCCCATTAGTGGGTTAGTGGGTCTGACCTCAGCCCCACTCAGGTGCTCCTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR GCA 90 bp GTCACTGCCAAGGCTGCAGTTCCAGGTACCGGGGTGCACCTTAGGAGCCCTGTGCAGCTGTCCAGTCACTaGCAAGGCTGCAGTTCCAGG +
Preference number: 4 (lower is better)
Translates to: VTAKAAVPGTGVHLRSPVQLSSH*QGCSSR
Trigger: CCTGGAACTGCAGCCTTGGCAGTGACTGGACAGCTG...CACAGGGCTCCTAAGGTGCACCCCGGTACCTGGAACTGCAGCCTTGGCAGTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5
ENST00000542192.5
ENST00000625979.2
ENST00000627083.2
ENST00000629431.2
ENST00000630997.2
CDS-3UTR GCA 90 bp GTACCGGGGTGCACCTTAGGAGCCCTGTGGGCTTCTTCAGAAGGCAGGGTGACAGTGCCAGGGAGAGCCTaGTCTCCCCACTTCCTTAGC +
Preference number: 4 (lower is better)
Translates to: VPGCTLGALWASSEGRVTVPGRA*SPHFLS
Trigger: GCTAAGGAAGTGGGGAGAGCAGGCTCTCCCTGGCAC...TGTCACCCTGCCTTCTGAAGAAGCCCACAGGGCTCCTAAGGTGCACCCCGGTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000291722.11
ENST00000316948.9
ENST00000540581.5<