RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CABP1 (Homo sapiens)

Ensembl gene IDs: ENSG00000157782

Ensembl transcript IDs: ENST00000288616.7, ENST00000316803.7, ENST00000351200.6, ENST00000453000.1, ENST00000498082.1

Found 315 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCAGCAGCAGCTGGGCACATGGCCCTTGGCGCCTGGCATGACCTCTaGCGGCTTGGCACGGTGGCCTCCTCGTCGGCGGGCGCCCCCGCT +
Preference number: 1 (lower is better)
Translates to: PAAAGHMALGAWHDL*RLGTVASSSAGAPA
Trigger: AGCGGGGGCGCCCGCCGACGAGGAGGCCACCGTGCCAAGCCGGCAGAGGTCATGCCAGGCGCCAAGGGCCATGTGCCCAGCTGCTGCTGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316803.7
ENST00000453000.1
3UTR CCA 90 bp AGGCGAGCTGGGACGGGCGCAGAGCGAAGGTGGGAGGCTTTGCCCTaGGGCGGACATGCTGTGTGGGGTCTGCTGGCGGGCTCCCTGGCC +
Preference number: 1 (lower is better)
Translates to: RRAGTGAERRWEALP*GGHAVWGLLAGSLA
Trigger: GGCCAGGGAGCCCGCCAGCAGACCCCACACAGCATGTCCGCCCCAGGGCAAAGCCTCCCACCTTCGCTCTGCGCCCGTCCCAGCTCGCCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316803.7
ENST00000453000.1
3UTR CCA 90 bp ACATGGCCCTTGGCGCCTGGCATGACCTCTGCCGGCTTGGCACGGTaGCCTCCTCGTCGGCGGGCGCCCCCGCTTTCCAGTTGCAGGAGT +
Preference number: 1 (lower is better)
Translates to: TWPLAPGMTSAGLAR*PPRRRAPPLSSCRS
Trigger: ACTCCTGCAACTGGAAAGCGGGGGCGCCCGCCGACGAGGAGGCCACCGTGCCAAGCCGGCAGAGGTCATGCCAGGCGCCAAGGGCCATGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316803.7
ENST00000453000.1
3UTR CCA 90 bp GAGATAACAGGGCTGAGGCGAGCTGGGACGGGCGCAGAGCGAAGGTaGGAGGCTTTGCCCTGGGGCGGACATGCTGTGTGGGGTCTGCTG +
Preference number: 1 (lower is better)
Translates to: EITGLRRAGTGAERR*EALPWGGHAVWGLL
Trigger: CAGCAGACCCCACACAGCATGTCCGCCCCAGGGCAAAGCCTCCCACCTTCGCTCTGCGCCCGTCCCAGCTCGCCTCAGCCCTGTTATCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316803.7
ENST00000453000.1
3UTR CAA 90 bp CAGCTGGGCACATGGCCCTTGGCGCCTGGCATGACCTCTGCCGGCTaGGCACGGTGGCCTCCTCGTCGGCGGGCGCCCCCGCTTTCCAGT +
Preference number: 2 (lower is better)
Translates to: QLGTWPLAPGMTSAG*ARWPPRRRAPPLSS
Trigger: ACTGGAAAGCGGGGGCGCCCGCCGACGAGGAGGCCACCGTGCCAAGCCGGCAGAGGTCATGCCAGGCGCCAAGGGCCATGTGCCCAGCTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316803.7
ENST00000453000.1
3UTR CAA 90 bp GGGCTGAGGCGAGCTGGGACGGGCGCAGAGCGAAGGTGGGAGGCTTaGCCCTGGGGCGGACATGCTGTGTGGGGTCTGCTGGCGGGCTCC +
Preference number: 2 (lower is better)
Translates to: GLRRAGTGAERRWEA*PWGGHAVWGLLAGS
Trigger: GGAGCCCGCCAGCAGACCCCACACAGCATGTCCGCCCCAGGGCAAAGCCTCCCACCTTCGCTCTGCGCCCGTCCCAGCTCGCCTCAGCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316803.7
ENST00000453000.1
3UTR-3UTR CCA 90 bp GCGCCTGGCATGACCTCTGCCGGCTTGGCACGGTGGCCTCCTCGTCGGCGGGCGCCGCCTTTGGGAGCTTaGCAGTCCTGGAGGGGCCCT +
Preference number: 2 (lower is better)
Translates to: APGMTSAGLARWPPRRRAPPLGA*QSWRGP
Trigger: AGGGCCCCTCCAGGACTGCCAAGCTCCCAAAGGCGG...CGCCCGCCGACGAGGAGGCCACCGTGCCAAGCCGGCAGAGGTCATGCCAGGCGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316803.7
ENST00000453000.1
3UTR-3UTR GCA 90 bp CTCTGCCGGCTTGGCACGGTGGCCTCCTCGTCGGCGGGCGCCCCCGCTTTCCAGGTTAGTCTTTCACAGTaGGGAGGGGTGGGGGTCCGG +
Preference number: 2 (lower is better)
Translates to: LCRLGTVASSSAGAPAFQVSLSQ*GGVGVR
Trigger: CCGGACCCCCACCCCTCCGCACTGTGAAAGACTAAC...CTGGAAAGCGGGGGCGCCCGCCGACGAGGAGGCCACCGTGCCAAGCCGGCAGAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000316803.7
ENST00000453000.1
3UTR-3UTR CCA 90 bp GGCCCCATCCGCCAGTACATCCTGGGCTCTCGGCGGCTACAGCGGGTGAGGCAACCGCCTTTGGGAGCTTaGCAGTCCTGGAGGGGCCCT +
Preference number: 2 (lower is better)
Translates to: GPIRQYILGSRRLQRVRQPPLGA*QSWRGP
Trigger: AGGGCCCCTCCAGGACTGCCAAGCTCCCAAAGGCGG...TTGCCTCACCCGCTGTAGCCGCCGAGAGCCCAGGATGTACTGGCGGATGGGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288616.7
ENST00000316803.7
ENST00000351200.6
ENST00000453000.1
3UTR-3UTR CCA 90 bp GAGGCTTTGCCCTGGGGCGGACATGCTGTGTGGGGTCTGCTGGCGGGCTCCCTGATGGCCCTTGGCGCCTaGCATGACCTCTGCCGGCTT +
Preference number: 2 (lower is better)
Translates to: EALPWGGHAVWGLLAGSLMALGA*HDLCRL
Trigger: AAGCCGGCAGAGGTCATGCCAGGCGCCAAGGGCCAT...CAGGGAGCCCGCCAGCAGACCCCACACAGCATGTCCGCCCCAGGGCAAAGCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316803.7
ENST00000453000.1
3UTR-3UTR GCA 90 bp CACATGGCCCTTGGCGCCTGGCATGACCTCTGCCGGCTTGGCACGGTGGCCTCCGTTAGTCTTTCACAGTaGGGAGGGGTGGGGGTCCGG +
Preference number: 2 (lower is better)
Translates to: HMALGAWHDLCRLGTVASVSLSQ*GGVGVR
Trigger: CCGGACCCCCACCCCTCCGCACTGTGAAAGACTAAC...GGAGGCCACCGTGCCAAGCCGGCAGAGGTCATGCCAGGCGCCAAGGGCCATGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316803.7
ENST00000453000.1
3UTR-3UTR CCA 90 bp CGCCAGTACATCCTGGGCTCTCGGCGGCTACAGCGGGTGAGGCAAGCTCTAGCTCCGCCTTTGGGAGCTTaGCAGTCCTGGAGGGGCCCT +
Preference number: 2 (lower is better)
Translates to: RQYILGSRRLQRVRQALAPPLGA*QSWRGP
Trigger: AGGGCCCCTCCAGGACTGCCAAGCTCCCAAAGGCGG...AGCTAGAGCTTGCCTCACCCGCTGTAGCCGCCGAGAGCCCAGGATGTACTGGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288616.7
ENST00000316803.7
ENST00000351200.6
ENST00000453000.1
3UTR-3UTR GCA 90 bp ATTGGTTCTGAGATAACAGGGCTGAGGCGAGCTGGGACGGGCGCAGAGCGAAGGGCCTGGCATGACCTCTaGCGGCTTGGCACGGTGGCC +
Preference number: 2 (lower is better)
Translates to: IGSEITGLRRAGTGAERRAWHDL*RLGTVA
Trigger: GGCCACCGTGCCAAGCCGGCAGAGGTCATGCCAGGC...CCTTCGCTCTGCGCCCGTCCCAGCTCGCCTCAGCCCTGTTATCTCAGAACCAAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316803.7
ENST00000453000.1
3UTR-3UTR CCA 90 bp TCGTCGGCGGGCGCCCCCGCTTTCCAGTTGCAGGAGTTAGTCTTTCACAGTGCGCCGCCTTTGGGAGCTTaGCAGTCCTGGAGGGGCCCT +
Preference number: 2 (lower is better)
Translates to: SSAGAPAFQLQELVFHSAPPLGA*QSWRGP
Trigger: AGGGCCCCTCCAGGACTGCCAAGCTCCCAAAGGCGG...CGCACTGTGAAAGACTAACTCCTGCAACTGGAAAGCGGGGGCGCCCGCCGACGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316803.7
ENST00000453000.1
3UTR-3UTR CCA 90 bp ATTGGTTCTGAGATAACAGGGCTGAGGCGAGCTGGGACGGGCGCAGAGCGAAGGTCCGCCAGTACATCCTaGGCTCTCGGCGGCTACAGC +
Preference number: 2 (lower is better)
Translates to: IGSEITGLRRAGTGAERRSASTS*ALGGYS
Trigger: GCTGTAGCCGCCGAGAGCCCAGGATGTACTGGCGGA...CCTTCGCTCTGCGCCCGTCCCAGCTCGCCTCAGCCCTGTTATCTCAGAACCAAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316803.7
ENST00000453000.1
3UTR GCA 72 bp GCTGGGCACATGGCCCTTGGCGCCTGGCATGACCTCTaGCGGCTTGGCACGGTGGCCTCCTCGTCGGCGGGC +
Preference number: 3 (lower is better)
Translates to: AGHMALGAWHDL*RLGTVASSSAG
Trigger: GCCCGCCGACGAGGAGGCCACCGTGCCAAGCCGGCAGAGGTCATGCCAGGCGCCAAGGGCCATGTGCCCAGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316803.7
ENST00000453000.1
3UTR CCA 72 bp TTGGCGCCTGGCATGACCTCTGCCGGCTTGGCACGGTaGCCTCCTCGTCGGCGGGCGCCCCCGCTTTCCAGT +
Preference number: 3 (lower is better)
Translates to: LAPGMTSAGLAR*PPRRRAPPLSS
Trigger: ACTGGAAAGCGGGGGCGCCCGCCGACGAGGAGGCCACCGTGCCAAGCCGGCAGAGGTCATGCCAGGCGCCAA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316803.7
ENST00000453000.1
3UTR-3UTR CAA 90 bp TGCAGGCAGGCCCCATCCGCCAGTACATCCTGGGCTCTCGGCGGCTACAGCGGGCCCGCCTTTGGGAGCTaGGCAGTCCTGGAGGGGCCC +
Preference number: 3 (lower is better)
Translates to: CRQAPSASTSWALGGYSGPAFGS*AVLEGP
Trigger: GGGCCCCTCCAGGACTGCCAAGCTCCCAAAGGCGGG...CCCGCTGTAGCCGCCGAGAGCCCAGGATGTACTGGCGGATGGGGCCTGCCTGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288616.7
ENST00000316803.7
ENST00000351200.6
ENST00000453000.1
3UTR-3UTR CAA 90 bp GTGCAGGCAGGCCCCATCCGCCAGTACATCCTGGGCTCTCGGCGGCTACAGCGGCCCGCCTTTGGGAGCTaGGCAGTCCTGGAGGGGCCC +
Preference number: 3 (lower is better)
Translates to: VQAGPIRQYILGSRRLQRPAFGS*AVLEGP
Trigger: GGGCCCCTCCAGGACTGCCAAGCTCCCAAAGGCGGG...CCGCTGTAGCCGCCGAGAGCCCAGGATGTACTGGCGGATGGGGCCTGCCTGCAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288616.7
ENST00000316803.7
ENST00000351200.6
ENST00000453000.1
3UTR CCA 72 bp GGGCTGAGGCGAGCTGGGACGGGCGCAGAGCGAAGGTaGGAGGCTTTGCCCTGGGGCGGACATGCTGTGTGG +
Preference number: 3 (lower is better)
Translates to: GLRRAGTGAERR*EALPWGGHAVW
Trigger: CCACACAGCATGTCCGCCCCAGGGCAAAGCCTCCCACCTTCGCTCTGCGCCCGTCCCAGCTCGCCTCAGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316803.7
ENST00000453000.1
3UTR-3UTR CAA 90 bp GGCCCCATCCGCCAGTACATCCTGGGCTCTCGGCGGCTACAGCGGGTGAGGCAACCCGCCTTTGGGAGCTaGGCAGTCCTGGAGGGGCCC +
Preference number: 3 (lower is better)
Translates to: GPIRQYILGSRRLQRVRQPAFGS*AVLEGP
Trigger: GGGCCCCTCCAGGACTGCCAAGCTCCCAAAGGCGGG...TTGCCTCACCCGCTGTAGCCGCCGAGAGCCCAGGATGTACTGGCGGATGGGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288616.7
ENST00000316803.7
ENST00000351200.6
ENST00000453000.1
3UTR GCA 72 bp AGAGCGAAGGTGGGAGGCTTTGCCCTGGGGCGGACATaGTGTGTGGGGTCTGCTGGCGGGCTCCCTGGCCCA +
Preference number: 3 (lower is better)
Translates to: RAKVGGFALGRT*CVGSAGGLPGP
Trigger: TGGGCCAGGGAGCCCGCCAGCAGACCCCACACAGCATGTCCGCCCCAGGGCAAAGCCTCCCACCTTCGCTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316803.7
ENST00000453000.1
3UTR-3UTR CAA 90 bp CATCCGCCAGTACATCCTGGGCTCTCGGCGGCTACAGCGGGTGAGGCAAGCTCTCCCGCCTTTGGGAGCTaGGCAGTCCTGGAGGGGCCC +
Preference number: 3 (lower is better)
Translates to: HPPVHPGLSAATAGEASSPAFGS*AVLEGP
Trigger: GGGCCCCTCCAGGACTGCCAAGCTCCCAAAGGCGGG...AGAGCTTGCCTCACCCGCTGTAGCCGCCGAGAGCCCAGGATGTACTGGCGGATG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288616.7
ENST00000316803.7
ENST00000351200.6
ENST00000453000.1
3UTR-3UTR CAA 90 bp GGTGCAGGCAGGCCCCATCCGCCAGTACATCCTGGGCTCTCGGCGGCTACAGCGCTCTTAGCCCCGCCTTaGGGAGCTTGGCAGTCCTGG +
Preference number: 3 (lower is better)
Translates to: GAGRPHPPVHPGLSAATALLAPP*GAWQSW
Trigger: CCAGGACTGCCAAGCTCCCAAAGGCGGGGCTAAGAG...CGCTGTAGCCGCCGAGAGCCCAGGATGTACTGGCGGATGGGGCCTGCCTGCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288616.7
ENST00000316803.7
ENST00000351200.6
ENST00000453000.1
3UTR-3UTR CAA 90 bp GGGAGGCTTTGCCCTGGGGCGGACATGCTGTGTGGGGTCTGCTGGCGGGCTCCCGCCCCCGCTTTCCAGTaGCAGGAGTTAGTCTTTCAC +
Preference number: 3 (lower is better)
Translates to: GRLCPGADMLCGVCWRAPAPAFQ*QELVFH
Trigger: GTGAAAGACTAACTCCTGCAACTGGAAAGCGGGGGC...GGGAGCCCGCCAGCAGACCCCACACAGCATGTCCGCCCCAGGGCAAAGCCTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000316803.7
ENST00000453000.1
3UTR CAA 72 bp ACATGGCCCTTGGCGCCTGGCATGACCTCTGCCGGCTaGGCACGGTGGCCTCCTCGTCGGCGGGCGCCCCCG +
Preference number: 4 (lower is better)
Translates to: TWPLAPGMTSAG*ARWPPRRRAPP
Trigger: CGGGGGCGCCCGCCGACGAGGAGGCCACCGTGCCAAGCCGGCAGAGGTCATGCCAGGCGCCAAGGGCCATGT
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316803.7
ENST00000453000.1
CDS-3UTR CCA 90 bp GACCTCTGCCGGCTTGGCACGGTGGCCTCCTCGTCGGCGGGCGCCCCCGCTTTCGGAGCTTGGCAGTCCTaGAGGGGCCCTCGCGGCCTC +
Preference number: 4 (lower is better)
Translates to: DLCRLGTVASSSAGAPAFGAWQS*RGPRGL
Trigger: GAGGCCGCGAGGGCCCCTCCAGGACTGCCAAGCTCC...GAAAGCGGGGGCGCCCGCCGACGAGGAGGCCACCGTGCCAAGCCGGCAGAGGTC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316803.7
ENST00000453000.1
CDS-3UTR CCA 90 bp GCGCCTGGCATGACCTCTGCCGGCTTGGCACGGTGGCCTCCTCGTCGGCGGGCGGGAGCTTGGCAGTCCTaGAGGGGCCCTCGCGGCCTC +
Preference number: 4 (lower is better)
Translates to: APGMTSAGLARWPPRRRAGAWQS*RGPRGL
Trigger: GAGGCCGCGAGGGCCCCTCCAGGACTGCCAAGCTCC...CGCCCGCCGACGAGGAGGCCACCGTGCCAAGCCGGCAGAGGTCATGCCAGGCGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316803.7
ENST00000453000.1
CDS-3UTR CCA 90 bp ACCTCTGCCGGCTTGGCACGGTGGCCTCCTCGTCGGCGGGCGCCCCCGCTTTCCGCCCAGCCTGGCTCCTaGTCCCGGGAGGGGCTTTCC +
Preference number: 4 (lower is better)
Translates to: TSAGLARWPPRRRAPPLSAQPGS*SREGLS
Trigger: GGAAAGCCCCTCCCGGGACCAGGAGCCAGGCTGGGC...GGAAAGCGGGGGCGCCCGCCGACGAGGAGGCCACCGTGCCAAGCCGGCAGAGGT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000453000.1
CDS-3UTR GCA 90 bp GGGCACATGGCCCTTGGCGCCTGGCATGACCTCTGCCGGCTTGGCACGGTGGCCTCCCGGGGCCTGCAGTaGGCCTGGGGGAGCACACGC +
Preference number: 4 (lower is better)
Translates to: GHMALGAWHDLCRLGTVASRGLQ*AWGSTR
Trigger: GCGTGTGCTCCCCCAGGCGCACTGCAGGCCCCGGGA...GGCCACCGTGCCAAGCCGGCAGAGGTCATGCCAGGCGCCAAGGGCCATGTGCCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316803.7
CDS-3UTR GCA 90 bp ACCTCTGCCGGCTTGGCACGGTGGCCTCCTCGTCGGCGGGCGCCCCCGCTTTCCGCCTGGCATGACCTCTaGCGGCTTGGCACGGTGGCC +
Preference number: 4 (lower is better)
Translates to: TSAGLARWPPRRRAPPLSAWHDL*RLGTVA
Trigger: GGCCACCGTGCCAAGCCGGCAGAGGTCATGCCAGGC...GGAAAGCGGGGGCGCCCGCCGACGAGGAGGCCACCGTGCCAAGCCGGCAGAGGT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316803.7
ENST00000453000.1
CDS-3UTR CCA 90 bp GCGCCTGGCATGACCTCTGCCGGCTTGGCACGGTGGCCTCCTCGTCGGCGGGCGAGGGCTGAGGCGAGCTaGGACGGGCGCAGAGCGAAG +
Preference number: 4 (lower is better)
Translates to: APGMTSAGLARWPPRRRARAEAS*DGRRAK
Trigger: CTTCGCTCTGCGCCCGTCCCAGCTCGCCTCAGCCCT...CGCCCGCCGACGAGGAGGCCACCGTGCCAAGCCGGCAGAGGTCATGCCAGGCGC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316803.7
ENST00000453000.1
CDS-3UTR TCA 90 bp CTCTGCCGGCTTGGCACGGTGGCCTCCTCGTCGGCGGGCGCCCCCGCTTTCCAGGAAGCAGGCAGGGTGTaGGAGGTGGGGACTGGGGCA +
Preference number: 4 (lower is better)
Translates to: LCRLGTVASSSAGAPAFQEAGRV*EVGTGA
Trigger: TGCCCCAGTCCCCACCTCTCACACCCTGCCTGCTTC...CTGGAAAGCGGGGGCGCCCGCCGACGAGGAGGCCACCGTGCCAAGCCGGCAGAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000453000.1
CDS-3UTR GCA 90 bp CTTGGCGCCTGGCATGACCTCTGCCGGCTTGGCACGGTGGCCTCCTCGTCGGCGCAGATCTGGGGGCGCTaGCGGCTGTCCCCGGAGAGC +
Preference number: 4 (lower is better)
Translates to: LGAWHDLCRLGTVASSSAQIWGR*RLSPES
Trigger: GCTCTCCGGGGACAGCCGGCAGCGCCCCCAGATCTG...CGCCGACGAGGAGGCCACCGTGCCAAGCCGGCAGAGGTCATGCCAGGCGCCAAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316803.7
CDS-3UTR TCA 90 bp GGCACATGGCCCTTGGCGCCTGGCATGACCTCTGCCGGCTTGGCACGGTGGCCTGGCCAAAGGCGGAGCTaGGCATGGGGCGCAGCCGGT +
Preference number: 4 (lower is better)
Translates to: GTWPLAPGMTSAGLARWPGQRRS*AWGAAG
Trigger: ACCGGCTGCGCCCCATGCTCAGCTCCGCCTTTGGCC...AGGCCACCGTGCCAAGCCGGCAGAGGTCATGCCAGGCGCCAAGGGCCATGTGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316803.7
CDS-3UTR CCA 90 bp ACCTCTGCCGGCTTGGCACGGTGGCCTCCTCGTCGGCGGGCGCCCCCGCTTTCCTCCGCCAGTACATCCTaGGCTCTCGGCGGCTACAGC +
Preference number: 4 (lower is better)
Translates to: TSAGLARWPPRRRAPPLSSASTS*ALGGYS
Trigger: GCTGTAGCCGCCGAGAGCCCAGGATGTACTGGCGGA...GGAAAGCGGGGGCGCCCGCCGACGAGGAGGCCACCGTGCCAAGCCGGCAGAGGT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316803.7
ENST00000453000.1
CDS-3UTR CCA 90 bp GGGGTGCAGGCAGGCCCCATCCGCCAGTACATCCTGGGCTCTCGGCGGCTACAGGGCCTGCAGTGCGCCTaGGGGAGCACACGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: GVQAGPIRQYILGSRRLQGLQCA*GSTRWL
Trigger: GAGCCAGCGTGTGCTCCCCCAGGCGCACTGCAGGCC...CTGTAGCCGCCGAGAGCCCAGGATGTACTGGCGGATGGGGCCTGCCTGCACCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000316803.7
CDS-3UTR CCA 90 bp CCCTTGGCGCCTGGCATGACCTCTGCCGGCTTGGCACGGTGGCCTCCTCGTCGGCCAGCCAGCAGCAGCTaGGCACATGGCCCTTGGCGC +
Preference number: 4 (lower is better)
Translates to: PLAPGMTSAGLARWPPRRPASSS*AHGPWR
Trigger: GCGCCAAGGGCCATGTGCCCAGCTGCTGCTGGCTGG...CCGACGAGGAGGCCACCGTGCCAAGCCGGCAGAGGTCATGCCAGGCGCCAAGGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316803.7
ENST00000453000.1
CDS-3UTR CCA 90 bp GGGAGGCTTTGCCCTGGGGCGGACATGCTGTGTGGGGTCTGCTGGCGGGCTCCCAGGGCTGAGGCGAGCTaGGACGGGCGCAGAGCGAAG +
Preference number: 4 (lower is better)
Translates to: GRLCPGADMLCGVCWRAPRAEAS*DGRRAK
Trigger: CTTCGCTCTGCGCCCGTCCCAGCTCGCCTCAGCCCT...GGGAGCCCGCCAGCAGACCCCACACAGCATGTCCGCCCCAGGGCAAAGCCTCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316803.7
ENST00000453000.1
CDS-3UTR TCA 90 bp TGCAGGCAGGCCCCATCCGCCAGTACATCCTGGGCTCTCGGCGGCTACAGCGGGGGATCCCCGGGTCCATaGAGGAGGCTCCTGGGGGAC +
Preference number: 4 (lower is better)
Translates to: CRQAPSASTSWALGGYSGGSPGP*RRLLGD
Trigger: GTCCCCCAGGAGCCTCCTTCATGGACCCGGGGATCC...CCCGCTGTAGCCGCCGAGAGCCCAGGATGTACTGGCGGATGGGGCCTGCCTGCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000288616.7
ENST00000351200.6
CDS-3UTR TCA 90 bp ACCTCTGCCGGCTTGGCACGGTGGCCTCCTCGTCGGCGGGCGCCCCCGCTTTCCGCTGGGACAGTTCGATaGGCTCCATCTCGGTGGGCA +
Preference number: 4 (lower is better)
Translates to: TSAGLARWPPRRRAPPLSAGTVR*APSRWA
Trigger: TGCCCACCGAGATGGAGCTCATCGAACTGTCCCAGC...GGAAAGCGGGGGCGCCCGCCGACGAGGAGGCCACCGTGCCAAGCCGGCAGAGGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316803.7
ENST00000453000.1
CDS-3UTR TCA 90 bp GACCTCTGCCGGCTTGGCACGGTGGCCTCCTCGTCGGCGGGCGCCCCCGCTTTCGCTGGGACAGTTCGATaGGCTCCATCTCGGTGGGCA +
Preference number: 4 (lower is better)
Translates to: DLCRLGTVASSSAGAPAFAGTVR*APSRWA
Trigger: TGCCCACCGAGATGGAGCTCATCGAACTGTCCCAGC...GAAAGCGGGGGCGCCCGCCGACGAGGAGGCCACCGTGCCAAGCCGGCAGAGGTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316803.7
ENST00000453000.1
CDS-3UTR CCA 90 bp GGGAGGCTTTGCCCTGGGGCGGACATGCTGTGTGGGGTCTGCTGGCGGGCTCCCCCGCCTTTGGGAGCTTaGCAGTCCTGGAGGGGCCCT +
Preference number: 4 (lower is better)
Translates to: GRLCPGADMLCGVCWRAPPPLGA*QSWRGP
Trigger: AGGGCCCCTCCAGGACTGCCAAGCTCCCAAAGGCGG...GGGAGCCCGCCAGCAGACCCCACACAGCATGTCCGCCCCAGGGCAAAGCCTCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000316803.7
ENST00000453000.1
CDS-3UTR CCA 90 bp AGGCCCCATCCGCCAGTACATCCTGGGCTCTCGGCGGCTACAGCGGGTGAGGCAATGGGGCGCAGCCGGTaGAGGAACGGGTCCGCCTCG +
Preference number: 4 (lower is better)
Translates to: RPHPPVHPGLSAATAGEAMGRSR*RNGSAS
Trigger: CGAGGCGGACCCGTTCCTCCACCGGCTGCGCCCCAT...TGCCTCACCCGCTGTAGCCGCCGAGAGCCCAGGATGTACTGGCGGATGGGGCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316803.7
CDS-3UTR CCA 90 bp GTGCAGGCAGGCCCCATCCGCCAGTACATCCTGGGCTCTCGGCGGCTACAGCGGCCAGCCAGCAGCAGCTaGGCACATGGCCCTTGGCGC +
Preference number: 4 (lower is better)
Translates to: VQAGPIRQYILGSRRLQRPASSS*AHGPWR
Trigger: GCGCCAAGGGCCATGTGCCCAGCTGCTGCTGGCTGG...CCGCTGTAGCCGCCGAGAGCCCAGGATGTACTGGCGGATGGGGCCTGCCTGCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316803.7
ENST00000453000.1
CDS-3UTR CCA 90 bp CTCTGCCGGCTTGGCACGGTGGCCTCCTCGTCGGCGGGCGCCCCCGCTTTCCAGCAGCCAGATCCCCGCTaGAAGGCAGTGAGGGCAATC +
Preference number: 4 (lower is better)
Translates to: LCRLGTVASSSAGAPAFQQPDPR*KAVRAI
Trigger: GATTGCCCTCACTGCCTTCCAGCGGGGATCTGGCTG...CTGGAAAGCGGGGGCGCCCGCCGACGAGGAGGCCACCGTGCCAAGCCGGCAGAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000453000.1
CDS-3UTR TCA 90 bp CCCATCCGCCAGTACATCCTGGGCTCTCGGCGGCTACAGCGGGTGAGGCAAGCTTCGCCGCCGCCCATGTaGCAGCGCAGCCTCTACGCC +
Preference number: 4 (lower is better)
Translates to: PIRQYILGSRRLQRVRQASPPPM*QRSLYA
Trigger: GGCGTAGAGGCTGCGCTGTCACATGGGCGGCGGCGA...AGCTTGCCTCACCCGCTGTAGCCGCCGAGAGCCCAGGATGTACTGGCGGATGGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316803.7
CDS-3UTR GCA 90 bp CCCTTGGCGCCTGGCATGACCTCTGCCGGCTTGGCACGGTGGCCTCCTCGTCGGAGCCCATGGTGCGCATaGAGTTGCCCAGATCCCGGC +
Preference number: 4 (lower is better)
Translates to: PLAPGMTSAGLARWPPRRSPWCA*SCPDPG
Trigger: GCCGGGATCTGGGCAACTGCATGCGCACCATGGGCT...CCGACGAGGAGGCCACCGTGCCAAGCCGGCAGAGGTCATGCCAGGCGCCAAGGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316803.7
ENST00000453000.1
CDS-3UTR CCA 90 bp AGAGCGAAGGTGGGAGGCTTTGCCCTGGGGCGGACATGCTGTGTGGGGTCTGCTGGAGCTCCCGGCGGCTaGCGGTGCAGATCTGGGGGC +
Preference number: 4 (lower is better)
Translates to: RAKVGGFALGRTCCVGSAGAPGG*RCRSGG
Trigger: GCCCCCAGATCTGCACCGCCAGCCGCCGGGAGCTCC...AGCAGACCCCACACAGCATGTCCGCCCCAGGGCAAAGCCTCCCACCTTCGCTCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000316803.7
3UTR CAA 72 bp CGAGCTGGGACGGGCGCAGAGCGAAGGTGGGAGGCTTaGCCCTGGGGCGGACATGCTGTGTGGGGTCTGCTG +
Preference number: 4 (lower is better)
Translates to: RAGTGAERRWEA*PWGGHAVWGLL
Trigger: CAGCAGACCCCACACAGCATGTCCGCCCCAGGGCAAAGCCTCCCACCTTCGCTCTGCGCCCGTCCCAGCTCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316803.7
ENST00000453000.1
CDS-3UTR TCA 90 bp AGGCCCCATCCGCCAGTACATCCTGGGCTCTCGGCGGCTACAGCGGGTGAGGCACCTCCAGGACGGATGTaGGCCCTCTCTTGCGCGCGT +
Preference number: 4 (lower is better)
Translates to: RPHPPVHPGLSAATAGEAPPGRM*ALSCAR
Trigger: ACGCGCGCAAGAGAGGGCTCACATCCGTCCTGGAGG...TGCCTCACCCGCTGTAGCCGCCGAGAGCCCAGGATGTACTGGCGGATGGGGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288616.7
CDS-3UTR TCA 90 bp GACCTCTGCCGGCTTGGCACGGTGGCCTCCTCGTCGGCGGGCGCCCCCGCTTTCTTCCTCTGGTCGCAGTaGTCTATCCTGGCCAAAGGC +
Preference number: 4 (lower is better)
Translates to: DLCRLGTVASSSAGAPAFFLWSQ*SILAKG
Trigger: GCCTTTGGCCAGGATAGATCACTGCGACCAGAGGAA...GAAAGCGGGGGCGCCCGCCGACGAGGAGGCCACCGTGCCAAGCCGGCAGAGGTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316803.7
CDS-3UTR TCA 90 bp GGTGCAGGCAGGCCCCATCCGCCAGTACATCCTGGGCTCTCGGCGGCTACAGCGCGCAAGAGGGGACCCTaGGAGTCAAGGAGCGGGGTT +
Preference number: 4 (lower is better)
Translates to: GAGRPHPPVHPGLSAATARKRGP*ESRSGV
Trigger: AACCCCGCTCCTTGACTCTCAGGGTCCCCTCTTGCG...CGCTGTAGCCGCCGAGAGCCCAGGATGTACTGGCGGATGGGGCCTGCCTGCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000453000.1
CDS-3UTR GCA 90 bp TGCAGGCAGGCCCCATCCGCCAGTACATCCTGGGCTCTCGGCGGCTACAGCGGGCCCCGCTGCCAAATCTaGAGGGAGATGGCCTCAGGG +
Preference number: 4 (lower is better)
Translates to: CRQAPSASTSWALGGYSGPRCQI*REMASG
Trigger: CCCTGAGGCCATCTCCCTGCAGATTTGGCAGCGGGG...CCCGCTGTAGCCGCCGAGAGCCCAGGATGTACTGGCGGATGGGGCCTGCCTGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288616.7
CDS-3UTR GCA 90 bp GGTGCAGGCAGGCCCCATCCGCCAGTACATCCTGGGCTCTCGGCGGCTACAGCGGCCTCCCTCCGTCTGTaGCGTTCTTCCTCCAGGACG +
Preference number: 4 (lower is better)
Translates to: GAGRPHPPVHPGLSAATAASLRL*RSSSRT
Trigger: CGTCCTGGAGGAAGAACGGCACAGACGGAGGGAGGC...CGCTGTAGCCGCCGAGAGCCCAGGATGTACTGGCGGATGGGGCCTGCCTGCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288616.7
ENST00000351200.6
CDS-3UTR GCA 90 bp TGCAGGCAGGCCCCATCCGCCAGTACATCCTGGGCTCTCGGCGGCTACAGCGGGGAAGGTGGGAGGCTTTaGCCTGGGGCGGACATGCTG +
Preference number: 4 (lower is better)
Translates to: CRQAPSASTSWALGGYSGEGGRL*PGADML
Trigger: CAGCATGTCCGCCCCAGGGCAAAGCCTCCCACCTTC...CCCGCTGTAGCCGCCGAGAGCCCAGGATGTACTGGCGGATGGGGCCTGCCTGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000316803.7
ENST00000453000.1
CDS-3UTR GCA 90 bp GCGAAGGTGGGAGGCTTTGCCCTGGGGCGGACATGCTGTGTGGGGTCTGCTGGCAGGGTGTCACCTCCCTaGCCAGCCTGGCTCCTGGTC +
Preference number: 4 (lower is better)
Translates to: AKVGGFALGRTCCVGSAGRVSPP*PAWLLV
Trigger: GACCAGGAGCCAGGCTGGGCAGGGAGGTGACACCCT...GCCAGCAGACCCCACACAGCATGTCCGCCCCAGGGCAAAGCCTCCCACCTTCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453000.1
CDS-3UTR CCA 90 bp AGGCCCCATCCGCCAGTACATCCTGGGCTCTCGGCGGCTACAGCGGGTGAGGCACCGCCTTTGGGAGCTTaGCAGTCCTGGAGGGGCCCT +
Preference number: 4 (lower is better)
Translates to: RPHPPVHPGLSAATAGEAPPLGA*QSWRGP
Trigger: AGGGCCCCTCCAGGACTGCCAAGCTCCCAAAGGCGG...TGCCTCACCCGCTGTAGCCGCCGAGAGCCCAGGATGTACTGGCGGATGGGGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288616.7
ENST00000316803.7
ENST00000351200.6
ENST00000453000.1
CDS-3UTR CCA 90 bp GAGGCTTTGCCCTGGGGCGGACATGCTGTGTGGGGTCTGCTGGCGGGCTCCCTGTCCGCCAGTACATCCTaGGCTCTCGGCGGCTACAGC +
Preference number: 4 (lower is better)
Translates to: EALPWGGHAVWGLLAGSLSASTS*ALGGYS
Trigger: GCTGTAGCCGCCGAGAGCCCAGGATGTACTGGCGGA...CAGGGAGCCCGCCAGCAGACCCCACACAGCATGTCCGCCCCAGGGCAAAGCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316803.7
ENST00000453000.1
CDS-3UTR CCA 90 bp CTCCTCTTAGCCCCGCCTTTGGGAGCTTGGCAGTCCTGGAGGGGCCCTCGCGGCTCCGCCAGTACATCCTaGGCTCTCGGCGGCTACAGC +
Preference number: 4 (lower is better)
Translates to: LLLAPPLGAWQSWRGPRGSASTS*ALGGYS
Trigger: GCTGTAGCCGCCGAGAGCCCAGGATGTACTGGCGGA...GCCGCGAGGGCCCCTCCAGGACTGCCAAGCTCCCAAAGGCGGGGCTAAGAGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288616.7
ENST00000316803.7
ENST00000351200.6
ENST00000453000.1
CDS-3UTR CCA 90 bp GGTGCAGGCAGGCCCCATCCGCCAGTACATCCTGGGCTCTCGGCGGCTACAGCGATGGCCCTTGGCGCCTaGCATGACCTCTGCCGGCTT +
Preference number: 4 (lower is better)
Translates to: GAGRPHPPVHPGLSAATAMALGA*HDLCRL
Trigger: AAGCCGGCAGAGGTCATGCCAGGCGCCAAGGGCCAT...CGCTGTAGCCGCCGAGAGCCCAGGATGTACTGGCGGATGGGGCCTGCCTGCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316803.7
ENST00000453000.1
CDS-3UTR CCA 90 bp CTTGGCGCCTGGCATGACCTCTGCCGGCTTGGCACGGTGGCCTCCTCGTCGGCGGAGGGCAATCGGAGCTaGCAGCATGGAGACCAGGCT +
Preference number: 4 (lower is better)
Translates to: LGAWHDLCRLGTVASSSAEGNRS*QHGDQA
Trigger: AGCCTGGTCTCCATGCTGCCAGCTCCGATTGCCCTC...CGCCGACGAGGAGGCCACCGTGCCAAGCCGGCAGAGGTCATGCCAGGCGCCAAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453000.1
CDS-3UTR TCA 90 bp GGTGCAGGCAGGCCCCATCCGCCAGTACATCCTGGGCTCTCGGCGGCTACAGCGCCAGCAGGTTGTGCATaGCTGCGCAGTTCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: GAGRPHPPVHPGLSAATAPAGCA*LRSSGP
Trigger: TGGCCCAGAACTGCGCAGTCATGCACAACCTGCTGG...CGCTGTAGCCGCCGAGAGCCCAGGATGTACTGGCGGATGGGGCCTGCCTGCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288616.7
ENST00000453000.1
CDS-3UTR TCA 90 bp CTCTGCCGGCTTGGCACGGTGGCCTCCTCGTCGGCGGGCGCCCCCGCTTTCCAGCACCCAGGTTCATGTTaGTCTGCTGGGACAGTTCGA +
Preference number: 4 (lower is better)
Translates to: LCRLGTVASSSAGAPAFQHPGSC*SAGTVR
Trigger: TCGAACTGTCCCAGCAGATCAACATGAACCTGGGTG...CTGGAAAGCGGGGGCGCCCGCCGACGAGGAGGCCACCGTGCCAAGCCGGCAGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316803.7
ENST00000453000.1
CDS-3UTR GCA 90 bp GGTGCAGGCAGGCCCCATCCGCCAGTACATCCTGGGCTCTCGGCGGCTACAGCGGCCCAGAATGGCAGCTaGGGCTGGGAATTAGGCCAG +
Preference number: 4 (lower is better)
Translates to: GAGRPHPPVHPGLSAATAAQNGS*GWELGQ
Trigger: CTGGCCTAATTCCCAGCCGCAGCTGCCATTCTGGGC...CGCTGTAGCCGCCGAGAGCCCAGGATGTACTGGCGGATGGGGCCTGCCTGCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288616.7
CDS-3UTR GCA 90 bp CTCCTCTTAGCCCCGCCTTTGGGAGCTTGGCAGTCCTGGAGGGGCCCTCGCGGCCCTTGCGCAGGAAAATaGAGGCAGGGCCCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: LLLAPPLGAWQSWRGPRGPCAGK*RQGPAG
Trigger: ACCTGCTGGGCCCTGCCTGCATTTTCCTGCGCAAGG...GCCGCGAGGGCCCCTCCAGGACTGCCAAGCTCCCAAAGGCGGGGCTAAGAGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000288616.7
ENST00000453000.1
CDS-3UTR GCA 90 bp GCGAAGGTGGGAGGCTTTGCCCTGGGGCGGACATGCTGTGTGGGGTCTGCTGGCTCGCTTTTGGCGATGTaGGAGCTCATCGCGGCGGGG +
Preference number: 4 (lower is better)
Translates to: AKVGGFALGRTCCVGSAGSLLAM*ELIAAG
Trigger: CCCCGCCGCGATGAGCTCGCACATCGCCAAAAGCGA...GCCAGCAGACCCCACACAGCATGTCCGCCCCAGGGCAAAGCCTCCCACCTTCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000316803.7
CDS-3UTR GCA 90 bp GAGGCTTTGCCCTGGGGCGGACATGCTGTGTGGGGTCTGCTGGCGGGCTCCCTGGTTAGTCTTTCACAGTaGGGAGGGGTGGGGGTCCGG +
Preference number: 4 (lower is better)
Translates to: EALPWGGHAVWGLLAGSLVSLSQ*GGVGVR
Trigger: CCGGACCCCCACCCCTCCGCACTGTGAAAGACTAAC...CAGGGAGCCCGCCAGCAGACCCCACACAGCATGTCCGCCCCAGGGCAAAGCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000316803.7
ENST00000453000.1
CDS-3UTR GCA 90 bp AGAGCGAAGGTGGGAGGCTTTGCCCTGGGGCGGACATGCTGTGTGGGGTCTGCTGCCTGGCATGACCTCTaGCGGCTTGGCACGGTGGCC +
Preference number: 4 (lower is better)
Translates to: RAKVGGFALGRTCCVGSAAWHDL*RLGTVA
Trigger: GGCCACCGTGCCAAGCCGGCAGAGGTCATGCCAGGC...AGCAGACCCCACACAGCATGTCCGCCCCAGGGCAAAGCCTCCCACCTTCGCTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316803.7
ENST00000453000.1
CDS-3UTR GCA 90 bp AGAGCGAAGGTGGGAGGCTTTGCCCTGGGGCGGACATGCTGTGTGGGGTCTGCTGCCCTGGGGCGGACATaGTGTGTGGGGTCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: RAKVGGFALGRTCCVGSAALGRT*CVGSAG
Trigger: GCCAGCAGACCCCACACAGCATGTCCGCCCCAGGGC...AGCAGACCCCACACAGCATGTCCGCCCCAGGGCAAAGCCTCCCACCTTCGCTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000316803.7
ENST00000453000.1
CDS-3UTR CCA 90 bp GTACATCCTGGGCTCTCGGCGGCTACAGCGGGTGAGGCAAGCTCTAGCTCCTCTGGAGCTTGGCAGTCCTaGAGGGGCCCTCGCGGCCTC +
Preference number: 4 (lower is better)
Translates to: VHPGLSAATAGEASSSSSGAWQS*RGPRGL
Trigger: GAGGCCGCGAGGGCCCCTCCAGGACTGCCAAGCTCC...AGAGGAGCTAGAGCTTGCCTCACCCGCTGTAGCCGCCGAGAGCCCAGGATGTAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288616.7
ENST00000316803.7
ENST00000351200.6
ENST00000453000.1
CDS-3UTR CCA 90 bp CAAGCTCTAGCTCCTCTTAGCCCCGCCTTTGGGAGCTTGGCAGTCCTGGAGGGGGGAGCTTGGCAGTCCTaGAGGGGCCCTCGCGGCCTC +
Preference number: 4 (lower is better)
Translates to: QALAPLSPAFGSLAVLEGGAWQS*RGPRGL
Trigger: GAGGCCGCGAGGGCCCCTCCAGGACTGCCAAGCTCC...CCCCTCCAGGACTGCCAAGCTCCCAAAGGCGGGGCTAAGAGGAGCTAGAGCTTG
67% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000288616.7
ENST00000316803.7
ENST00000351200.6
ENST00000453000.1
CDS-3UTR CCA 90 bp GGCCCCATCCGCCAGTACATCCTGGGCTCTCGGCGGCTACAGCGGGTGAGGCAATCCGCCAGTACATCCTaGGCTCTCGGCGGCTACAGC +
Preference number: 4 (lower is better)
Translates to: GPIRQYILGSRRLQRVRQSASTS*ALGGYS
Trigger: GCTGTAGCCGCCGAGAGCCCAGGATGTACTGGCGGA...TTGCCTCACCCGCTGTAGCCGCCGAGAGCCCAGGATGTACTGGCGGATGGGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288616.7
ENST00000316803.7
ENST00000351200.6
ENST00000453000.1
CDS-3UTR CCA 90 bp ATCCTGGGCTCTCGGCGGCTACAGCGGGTGAGGCAAGCTCTAGCTCCTCTTAGCCTGGCGGTGCAGATCTaGGGGCGCTGCCGGCTGTCC +
Preference number: 4 (lower is better)
Translates to: ILGSRRLQRVRQALAPLSLAVQI*GRCRLS
Trigger: GGACAGCCGGCAGCGCCCCCAGATCTGCACCGCCAG...GCTAAGAGGAGCTAGAGCTTGCCTCACCCGCTGTAGCCGCCGAGAGCCCAGGAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316803.7
CDS-3UTR CCA 90 bp AGGCAAGCTCTAGCTCCTCTTAGCCCCGCCTTTGGGAGCTTGGCAGTCCTGGAGGGGGCCTCCGCGAACTaGGGTCCCCGGACGACTGCG +
Preference number: 4 (lower is better)
Translates to: RQALAPLSPAFGSLAVLEGASAN*GPRTTA
Trigger: CGCAGTCGTCCGGGGACCCCAGTTCGCGGAGGCCCC...CTCCAGGACTGCCAAGCTCCCAAAGGCGGGGCTAAGAGGAGCTAGAGCTTGCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000316803.7
CDS-3UTR CCA 90 bp CTTGGCGCCTGGCATGACCTCTGCCGGCTTGGCACGGTGGCCTCCTCGTCGGCGCGCAGTGATCTATCCTaGCCAAAGGCGGAGCTGAGC +
Preference number: 4 (lower is better)
Translates to: LGAWHDLCRLGTVASSSARSDLS*PKAELS
Trigger: GCTCAGCTCCGCCTTTGGCCAGGATAGATCACTGCG...CGCCGACGAGGAGGCCACCGTGCCAAGCCGGCAGAGGTCATGCCAGGCGCCAAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316803.7
CDS-3UTR CCA 90 bp GGCCCCATCCGCCAGTACATCCTGGGCTCTCGGCGGCTACAGCGGGTGAGGCAAATGGCCCTTGGCGCCTaGCATGACCTCTGCCGGCTT +
Preference number: 4 (lower is better)
Translates to: GPIRQYILGSRRLQRVRQMALGA*HDLCRL
Trigger: AAGCCGGCAGAGGTCATGCCAGGCGCCAAGGGCCAT...TTGCCTCACCCGCTGTAGCCGCCGAGAGCCCAGGATGTACTGGCGGATGGGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316803.7
ENST00000453000.1
CDS-3UTR CCA 90 bp CGCAGAGCGAAGGTGGGAGGCTTTGCCCTGGGGCGGACATGCTGTGTGGGGTCTCAGCAGCTGGGCACATaGCCCTTGGCGCCTGGCATG +
Preference number: 4 (lower is better)
Translates to: RRAKVGGFALGRTCCVGSQQLGT*PLAPGM
Trigger: CATGCCAGGCGCCAAGGGCCATGTGCCCAGCTGCTG...AGACCCCACACAGCATGTCCGCCCCAGGGCAAAGCCTCCCACCTTCGCTCTGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316803.7
ENST00000453000.1
CDS-3UTR CCA 90 bp CAAGCTCTAGCTCCTCTTAGCCCCGCCTTTGGGAGCTTGGCAGTCCTGGAGGGGCTGTGTGGGGTCTGCTaGCGGGCTCCCTGGCCCACC +
Preference number: 4 (lower is better)
Translates to: QALAPLSPAFGSLAVLEGLCGVC*RAPWPT
Trigger: GGTGGGCCAGGGAGCCCGCCAGCAGACCCCACACAG...CCCCTCCAGGACTGCCAAGCTCCCAAAGGCGGGGCTAAGAGGAGCTAGAGCTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000316803.7
ENST00000453000.1
CDS-3UTR CCA 90 bp CATCCGCCAGTACATCCTGGGCTCTCGGCGGCTACAGCGGGTGAGGCAAGCTCTGGCGGACATGCTGTGTaGGGTCTGCTGGCGGGCTCC +
Preference number: 4 (lower is better)
Translates to: HPPVHPGLSAATAGEASSGGHAV*GLLAGS
Trigger: GGAGCCCGCCAGCAGACCCCACACAGCATGTCCGCC...AGAGCTTGCCTCACCCGCTGTAGCCGCCGAGAGCCCAGGATGTACTGGCGGATG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316803.7
ENST00000453000.1
CDS-3UTR CCA 90 bp GATAACAGGGCTGAGGCGAGCTGGGACGGGCGCAGAGCGAAGGTGGGAGGCTTTGGCGGACATGCTGTGTaGGGTCTGCTGGCGGGCTCC +
Preference number: 4 (lower is better)
Translates to: DNRAEASWDGRRAKVGGFGGHAV*GLLAGS
Trigger: GGAGCCCGCCAGCAGACCCCACACAGCATGTCCGCC...AAAGCCTCCCACCTTCGCTCTGCGCCCGTCCCAGCTCGCCTCAGCCCTGTTATC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316803.7
ENST00000453000.1
CDS-3UTR CCA 90 bp GCCTCCTCGTCGGCGGGCGCCCCCGCTTTCCAGTTGCAGGAGTTAGTCTTTCACGGCGCAGAGCGAAGGTaGGAGGCTTTGCCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: ASSSAGAPAFQLQELVFHGAERR*EALPWG
Trigger: GCCCCAGGGCAAAGCCTCCCACCTTCGCTCTGCGCC...GTGAAAGACTAACTCCTGCAACTGGAAAGCGGGGGCGCCCGCCGACGAGGAGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316803.7
ENST00000453000.1
3UTR CAA 72 bp GTGGCCTCCTCGTCGGCGGGCGCCCCCGCTTTCCAGTaGCAGGAGTTAGTCTTTCACAGTGCGGAGGGGTGG +
Preference number: 4 (lower is better)
Translates to: VASSSAGAPAFQ*QELVFHSAEGW
Trigger: CCACCCCTCCGCACTGTGAAAGACTAACTCCTGCAACTGGAAAGCGGGGGCGCCCGCCGACGAGGAGGCCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316803.7
ENST00000453000.1
CDS-3UTR TCA 90 bp AGGCCCCATCCGCCAGTACATCCTGGGCTCTCGGCGGCTACAGCGGGTGAGGCACCAGCAGGTTGTGCATaGCTGCGCAGTTCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: RPHPPVHPGLSAATAGEAPAGCA*LRSSGP
Trigger: TGGCCCAGAACTGCGCAGTCATGCACAACCTGCTGG...TGCCTCACCCGCTGTAGCCGCCGAGAGCCCAGGATGTACTGGCGGATGGGGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288616.7
ENST00000453000.1
CDS-3UTR TCA 90 bp CCCTTGGCGCCTGGCATGACCTCTGCCGGCTTGGCACGGTGGCCTCCTCGTCGGCCAGATCCCGGCAGTTaGTGTAGCCATCCTTGTCCT +
Preference number: 4 (lower is better)
Translates to: PLAPGMTSAGLARWPPRRPDPGS*CSHPCP
Trigger: AGGACAAGGATGGCTACATCAACTGCCGGGATCTGG...CCGACGAGGAGGCCACCGTGCCAAGCCGGCAGAGGTCATGCCAGGCGCCAAGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316803.7
ENST00000453000.1
CDS-3UTR GCA 90 bp GGGGTGCAGGCAGGCCCCATCCGCCAGTACATCCTGGGCTCTCGGCGGCTACAGCCTCTCTTGCGCGCGTaGTCTCTTACTCGTCTGCCT +
Preference number: 4 (lower is better)
Translates to: GVQAGPIRQYILGSRRLQPLLRA*SLTRLP
Trigger: AGGCAGACGAGTAAGAGAGCACGCGCGCAAGAGAGG...CTGTAGCCGCCGAGAGCCCAGGATGTACTGGCGGATGGGGCCTGCCTGCACCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288616.7
CDS-3UTR GCA 90 bp CGGCGGCTACAGCGGGTGAGGCAAGCTCTAGCTCCTCTTAGCCCCGCCTTTGGGAGCCCATGGTGCGCATaGAGTTGCCCAGATCCCGGC +
Preference number: 4 (lower is better)
Translates to: RRLQRVRQALAPLSPAFGSPWCA*SCPDPG
Trigger: GCCGGGATCTGGGCAACTGCATGCGCACCATGGGCT...CCCAAAGGCGGGGCTAAGAGGAGCTAGAGCTTGCCTCACCCGCTGTAGCCGCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288616.7
ENST00000316803.7
ENST00000351200.6
ENST00000453000.1
CDS-3UTR GCA 90 bp CCGCCAGTACATCCTGGGCTCTCGGCGGCTACAGCGGGTGAGGCAAGCTCTAGCAGCCCATGGTGCGCATaGAGTTGCCCAGATCCCGGC +
Preference number: 4 (lower is better)
Translates to: PPVHPGLSAATAGEASSSSPWCA*SCPDPG
Trigger: GCCGGGATCTGGGCAACTGCATGCGCACCATGGGCT...GCTAGAGCTTGCCTCACCCGCTGTAGCCGCCGAGAGCCCAGGATGTACTGGCGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288616.7
ENST00000316803.7
ENST00000351200.6
ENST00000453000.1
CDS-3UTR GCA 90 bp ATCCTGGGCTCTCGGCGGCTACAGCGGGTGAGGCAAGCTCTAGCTCCTCTTAGCATGCTGTGTGGGGTCTaGTGGCGGGCTCCCTGGCCC +
Preference number: 4 (lower is better)
Translates to: ILGSRRLQRVRQALAPLSMLCGV*WRAPWP
Trigger: GGGCCAGGGAGCCCGCCAGCAGACCCCACACAGCAT...GCTAAGAGGAGCTAGAGCTTGCCTCACCCGCTGTAGCCGCCGAGAGCCCAGGAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316803.7
ENST00000453000.1
CDS-3UTR GCA 90 bp CAGTACATCCTGGGCTCTCGGCGGCTACAGCGGGTGAGGCAAGCTCTAGCTCCTATGCTGTGTGGGGTCTaGTGGCGGGCTCCCTGGCCC +
Preference number: 4 (lower is better)
Translates to: QYILGSRRLQRVRQALAPMLCGV*WRAPWP
Trigger: GGGCCAGGGAGCCCGCCAGCAGACCCCACACAGCAT...AGGAGCTAGAGCTTGCCTCACCCGCTGTAGCCGCCGAGAGCCCAGGATGTACTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316803.7
ENST00000453000.1
CDS-3UTR GCA 90 bp CTCGTCGGCGGGCGCCCCCGCTTTCCAGTTGCAGGAGTTAGTCTTTCACAGTGCGCCCTGGGGCGGACATaGTGTGTGGGGTCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: LVGGRPRFPVAGVSLSQCALGRT*CVGSAG
Trigger: GCCAGCAGACCCCACACAGCATGTCCGCCCCAGGGC...GCACTGTGAAAGACTAACTCCTGCAACTGGAAAGCGGGGGCGCCCGCCGACGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000316803.7
ENST00000453000.1
CDS-3UTR CCA 90 bp CATCCGCCAGTACATCCTGGGCTCTCGGCGGCTACAGCGGGTGAGGCAAGCTCTCCGCCTTTGGGAGCTTaGCAGTCCTGGAGGGGCCCT +
Preference number: 4 (lower is better)
Translates to: HPPVHPGLSAATAGEASSPPLGA*QSWRGP
Trigger: AGGGCCCCTCCAGGACTGCCAAGCTCCCAAAGGCGG...AGAGCTTGCCTCACCCGCTGTAGCCGCCGAGAGCCCAGGATGTACTGGCGGATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288616.7
ENST00000316803.7
ENST00000351200.6
ENST00000453000.1
CDS-3UTR CCA 90 bp CAGTACATCCTGGGCTCTCGGCGGCTACAGCGGGTGAGGCAAGCTCTAGCTCCTGGCGCAGAGCGAAGGTaGGAGGCTTTGCCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: QYILGSRRLQRVRQALAPGAERR*EALPWG
Trigger: GCCCCAGGGCAAAGCCTCCCACCTTCGCTCTGCGCC...AGGAGCTAGAGCTTGCCTCACCCGCTGTAGCCGCCGAGAGCCCAGGATGTACTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316803.7
ENST00000453000.1
CDS-3UTR CCA 90 bp GCGAAGGTGGGAGGCTTTGCCCTGGGGCGGACATGCTGTGTGGGGTCTGCTGGCGCAGGGTGTGAGAGGTaGGGACTGGGGCAAAGTGGA +
Preference number: 4 (lower is better)
Translates to: AKVGGFALGRTCCVGSAGAGCER*GLGQSG
Trigger: TCCACTTTGCCCCAGTCCCCACCTCTCACACCCTGC...GCCAGCAGACCCCACACAGCATGTCCGCCCCAGGGCAAAGCCTCCCACCTTCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000453000.1
CDS-3UTR TCA 90 bp ATCCTGGGCTCTCGGCGGCTACAGCGGGTGAGGCAAGCTCTAGCTCCTCTTAGCAGGCTCCTGGGGGACTaGGGGACTTCCGTCCCAGTC +
Preference number: 4 (lower is better)
Translates to: ILGSRRLQRVRQALAPLSRLLGD*GTSVPV
Trigger: GACTGGGACGGAAGTCCCTCAGTCCCCCAGGAGCCT...GCTAAGAGGAGCTAGAGCTTGCCTCACCCGCTGTAGCCGCCGAGAGCCCAGGAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288616.7
ENST00000351200.6
CDS-3UTR TCA 90 bp CTCCTCTTAGCCCCGCCTTTGGGAGCTTGGCAGTCCTGGAGGGGCCCTCGCGGCCCAGATCCCGGCAGTTaGTGTAGCCATCCTTGTCCT +
Preference number: 4 (lower is better)
Translates to: LLLAPPLGAWQSWRGPRGPDPGS*CSHPCP
Trigger: AGGACAAGGATGGCTACATCAACTGCCGGGATCTGG...GCCGCGAGGGCCCCTCCAGGACTGCCAAGCTCCCAAAGGCGGGGCTAAGAGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288616.7
ENST00000316803.7
ENST00000351200.6
ENST00000453000.1
CDS-3UTR TCA 90 bp TGCAGGCAGGCCCCATCCGCCAGTACATCCTGGGCTCTCGGCGGCTACAGCGGGCCAGATCCCGGCAGTTaGTGTAGCCATCCTTGTCCT +
Preference number: 4 (lower is better)
Translates to: CRQAPSASTSWALGGYSGPDPGS*CSHPCP
Trigger: AGGACAAGGATGGCTACATCAACTGCCGGGATCTGG...CCCGCTGTAGCCGCCGAGAGCCCAGGATGTACTGGCGGATGGGGCCTGCCTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288616.7
ENST00000316803.7
ENST00000351200.6
ENST00000453000.1
CDS-3UTR TCA 90 bp GCTCTAGCTCCTCTTAGCCCCGCCTTTGGGAGCTTGGCAGTCCTGGAGGGGCCCGCTGGGACAGTTCGATaGGCTCCATCTCGGTGGGCA +
Preference number: 4 (lower is better)
Translates to: ALAPLSPAFGSLAVLEGPAGTVR*APSRWA
Trigger: TGCCCACCGAGATGGAGCTCATCGAACTGTCCCAGC...GGGCCCCTCCAGGACTGCCAAGCTCCCAAAGGCGGGGCTAAGAGGAGCTAGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288616.7
ENST00000316803.7
ENST00000351200.6
ENST00000453000.1
CDS-3UTR GCA 90 bp AGGCCCCATCCGCCAGTACATCCTGGGCTCTCGGCGGCTACAGCGGGTGAGGCACCCTCCTTTCCCCGCTaGCAAATCTGCAGGGAGATG +
Preference number: 4 (lower is better)
Translates to: RPHPPVHPGLSAATAGEAPSFPR*QICREM
Trigger: CATCTCCCTGCAGATTTGGCAGCGGGGAAAGGAGGG...TGCCTCACCCGCTGTAGCCGCCGAGAGCCCAGGATGTACTGGCGGATGGGGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288616.7
CDS-3UTR GCA 90 bp CCGCCAGTACATCCTGGGCTCTCGGCGGCTACAGCGGGTGAGGCAAGCTCTAGCCCTTGCGCAGGAAAATaGAGGCAGGGCCCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: PPVHPGLSAATAGEASSSPCAGK*RQGPAG
Trigger: ACCTGCTGGGCCCTGCCTGCATTTTCCTGCGCAAGG...GCTAGAGCTTGCCTCACCCGCTGTAGCCGCCGAGAGCCCAGGATGTACTGGCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288616.7
ENST00000453000.1
CDS-3UTR GCA 90 bp CATCCGCCAGTACATCCTGGGCTCTCGGCGGCTACAGCGGGTGAGGCAAGCTCTAGCCCATGGTGCGCATaGAGTTGCCCAGATCCCGGC +
Preference number: 4 (lower is better)
Translates to: HPPVHPGLSAATAGEASSSPWCA*SCPDPG
Trigger: GCCGGGATCTGGGCAACTGCATGCGCACCATGGGCT...AGAGCTTGCCTCACCCGCTGTAGCCGCCGAGAGCCCAGGATGTACTGGCGGATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288616.7
ENST00000316803.7
ENST00000351200.6
ENST00000453000.1
CDS-3UTR CCA 90 bp CCGCCAGTACATCCTGGGCTCTCGGCGGCTACAGCGGGTGAGGCAAGCTCTAGCAATGGCAGCTGCGGCTaGGAATTAGGCCAGCAGGCC +
Preference number: 4 (lower is better)
Translates to: PPVHPGLSAATAGEASSSNGSCG*ELGQQA
Trigger: GGCCTGCTGGCCTAATTCCCAGCCGCAGCTGCCATT...GCTAGAGCTTGCCTCACCCGCTGTAGCCGCCGAGAGCCCAGGATGTACTGGCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288616.7
CDS-3UTR CCA 90 bp GGGGTGCAGGCAGGCCCCATCCGCCAGTACATCCTGGGCTCTCGGCGGCTACAGACAGGGAAAGTCACCTaGAGAGCTGATGGCAGAGGG +
Preference number: 4 (lower is better)
Translates to: GVQAGPIRQYILGSRRLQTGKVT*RADGRG
Trigger: CCCTCTGCCATCAGCTCTCCAGGTGACTTTCCCTGT...CTGTAGCCGCCGAGAGCCCAGGATGTACTGGCGGATGGGGCCTGCCTGCACCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288616.7
CDS-3UTR CCA 90 bp CCTCTGCCGGCTTGGCACGGTGGCCTCCTCGTCGGCGGGCGCCCCCGCTTTCCATTCATGTTGATCTGCTaGGACAGTTCGATGAGCTCC +
Preference number: 4 (lower is better)
Translates to: PLPAWHGGLLVGGRPRFPFMLIC*DSSMSS
Trigger: GGAGCTCATCGAACTGTCCCAGCAGATCAACATGAA...TGGAAAGCGGGGGCGCCCGCCGACGAGGAGGCCACCGTGCCAAGCCGGCAGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316803.7
ENST00000453000.1
CDS-3UTR CCA 90 bp CTTGGCGCCTGGCATGACCTCTGCCGGCTTGGCACGGTGGCCTCCTCGTCGGCGCCTCTCGCAGCTCACTaGTGCTTATTTCCCCATCAC +
Preference number: 4 (lower is better)
Translates to: LGAWHDLCRLGTVASSSAPLAAH*CLFPHH
Trigger: GTGATGGGGAAATAAGCACCAGTGAGCTGCGAGAGG...CGCCGACGAGGAGGCCACCGTGCCAAGCCGGCAGAGGTCATGCCAGGCGCCAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316803.7
ENST00000453000.1
CDS-3UTR CCA 90 bp CCCTTGGCGCCTGGCATGACCTCTGCCGGCTTGGCACGGTGGCCTCCTCGTCGGCCTCTCGCAGCTCACTaGTGCTTATTTCCCCATCAC +
Preference number: 4 (lower is better)
Translates to: PLAPGMTSAGLARWPPRRPLAAH*CLFPHH
Trigger: GTGATGGGGAAATAAGCACCAGTGAGCTGCGAGAGG...CCGACGAGGAGGCCACCGTGCCAAGCCGGCAGAGGTCATGCCAGGCGCCAAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316803.7
ENST00000453000.1
CDS-3UTR CCA 90 bp CGGGTGAGGCAAGCTCTAGCTCCTCTTAGCCCCGCCTTTGGGAGCTTGGCAGTCCCGCCTTTGGGAGCTTaGCAGTCCTGGAGGGGCCCT +
Preference number: 4 (lower is better)
Translates to: RVRQALAPLSPAFGSLAVPPLGA*QSWRGP
Trigger: AGGGCCCCTCCAGGACTGCCAAGCTCCCAAAGGCGG...GACTGCCAAGCTCCCAAAGGCGGGGCTAAGAGGAGCTAGAGCTTGCCTCACCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288616.7
ENST00000316803.7
ENST00000351200.6
ENST00000453000.1
CDS-3UTR CCA 90 bp TCGTCGGCGGGCGCCCCCGCTTTCCAGTTGCAGGAGTTAGTCTTTCACAGTGCGCAGCAGCTGGGCACATaGCCCTTGGCGCCTGGCATG +
Preference number: 4 (lower is better)
Translates to: SSAGAPAFQLQELVFHSAQQLGT*PLAPGM
Trigger: CATGCCAGGCGCCAAGGGCCATGTGCCCAGCTGCTG...CGCACTGTGAAAGACTAACTCCTGCAACTGGAAAGCGGGGGCGCCCGCCGACGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316803.7
ENST00000453000.1
CDS-3UTR CCA 90 bp CTCCTCTTAGCCCCGCCTTTGGGAGCTTGGCAGTCCTGGAGGGGCCCTCGCGGCGTGATGCCCTCTGTGTaGCACATGCGCACACACACA +
Preference number: 4 (lower is better)
Translates to: LLLAPPLGAWQSWRGPRGVMPSV*HMRTHT
Trigger: TGTGTGTGTGCGCATGTGCCACACAGAGGGCATCAC...GCCGCGAGGGCCCCTCCAGGACTGCCAAGCTCCCAAAGGCGGGGCTAAGAGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453000.1
CDS-3UTR TCA 90 bp GTGAGGCAAGCTCTAGCTCCTCTTAGCCCCGCCTTTGGGAGCTTGGCAGTCCTGAGGCTCCTGGGGGACTaGGGGACTTCCGTCCCAGTC +
Preference number: 4 (lower is better)
Translates to: VRQALAPLSPAFGSLAVLRLLGD*GTSVPV
Trigger: GACTGGGACGGAAGTCCCTCAGTCCCCCAGGAGCCT...CAGGACTGCCAAGCTCCCAAAGGCGGGGCTAAGAGGAGCTAGAGCTTGCCTCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000288616.7
ENST00000351200.6
CDS-3UTR TCA 90 bp GGTGCAGGCAGGCCCCATCCGCCAGTACATCCTGGGCTCTCGGCGGCTACAGCGTTCCTCTGGTCGCAGTaGTCTATCAGGCTGCCTGTT +
Preference number: 4 (lower is better)
Translates to: GAGRPHPPVHPGLSAATAFLWSQ*SIRLPV
Trigger: AACAGGCAGCCTGATAGATCACTGCGACCAGAGGAA...CGCTGTAGCCGCCGAGAGCCCAGGATGTACTGGCGGATGGGGCCTGCCTGCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288616.7
ENST00000453000.1
CDS-3UTR TCA 90 bp GGTGCAGGCAGGCCCCATCCGCCAGTACATCCTGGGCTCTCGGCGGCTACAGCGCCTTGTCGAATTCTCTaGAGGCCTCTCGGAGCTCTT +
Preference number: 4 (lower is better)
Translates to: GAGRPHPPVHPGLSAATAPCRIL*RPLGAL
Trigger: AAGAGCTCCGAGAGGCCTTCAGAGAATTCGACAAGG...CGCTGTAGCCGCCGAGAGCCCAGGATGTACTGGCGGATGGGGCCTGCCTGCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288616.7
ENST00000316803.7
ENST00000351200.6
ENST00000453000.1
CDS-3UTR TCA 90 bp CTCCTCTTAGCCCCGCCTTTGGGAGCTTGGCAGTCCTGGAGGGGCCCTCGCGGCCCTTGTCGAATTCTCTaGAGGCCTCTCGGAGCTCTT +
Preference number: 4 (lower is better)
Translates to: LLLAPPLGAWQSWRGPRGPCRIL*RPLGAL
Trigger: AAGAGCTCCGAGAGGCCTTCAGAGAATTCGACAAGG...GCCGCGAGGGCCCCTCCAGGACTGCCAAGCTCCCAAAGGCGGGGCTAAGAGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288616.7
ENST00000316803.7
ENST00000351200.6
ENST00000453000.1
CDS-3UTR TCA 90 bp CGCAGAGCGAAGGTGGGAGGCTTTGCCCTGGGGCGGACATGCTGTGTGGGGTCTCCTGCCTCAGCCTCCTaGGTAGCTTGGTTTACAGGC +
Preference number: 4 (lower is better)
Translates to: RRAKVGGFALGRTCCVGSPASAS*VAWFTG
Trigger: GCCTGTAAACCAAGCTACTCAGGAGGCTGAGGCAGG...AGACCCCACACAGCATGTCCGCCCCAGGGCAAAGCCTCCCACCTTCGCTCTGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453000.1
CDS-3UTR TCA 90 bp TACATCCTGGGCTCTCGGCGGCTACAGCGGGTGAGGCAAGCTCTAGCTCCTCTTCCCGCTGGAAGGCAGTaGGGGCAATCGGAGCTGGCA +
Preference number: 4 (lower is better)
Translates to: YILGSRRLQRVRQALAPLPAGRQ*GQSELA
Trigger: TGCCAGCTCCGATTGCCCTCACTGCCTTCCAGCGGG...AAGAGGAGCTAGAGCTTGCCTCACCCGCTGTAGCCGCCGAGAGCCCAGGATGTA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453000.1
CDS-3UTR GCA 90 bp CAGTACATCCTGGGCTCTCGGCGGCTACAGCGGGTGAGGCAAGCTCTAGCTCCTGCCTCCCTCCGTCTGTaGCGTTCTTCCTCCAGGACG +
Preference number: 4 (lower is better)
Translates to: QYILGSRRLQRVRQALAPASLRL*RSSSRT
Trigger: CGTCCTGGAGGAAGAACGGCACAGACGGAGGGAGGC...AGGAGCTAGAGCTTGCCTCACCCGCTGTAGCCGCCGAGAGCCCAGGATGTACTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288616.7
ENST00000351200.6
CDS-3UTR GCA 90 bp GTACATCCTGGGCTCTCGGCGGCTACAGCGGGTGAGGCAAGCTCTAGCTCCTCTTTCCGTCCCAGTCTCTaGCAACCCCAGCCTCCCTCC +
Preference number: 4 (lower is better)
Translates to: VHPGLSAATAGEASSSSSFRPSL*QPQPPS
Trigger: GGAGGGAGGCTGGGGTTGGCAGAGACTGGGACGGAA...AGAGGAGCTAGAGCTTGCCTCACCCGCTGTAGCCGCCGAGAGCCCAGGATGTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288616.7
ENST00000351200.6
CDS-3UTR GCA 90 bp GCGAAGGTGGGAGGCTTTGCCCTGGGGCGGACATGCTGTGTGGGGTCTGCTGGCTCTCAGCGAAGCCCTTaGGCAGGAAAATGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: AKVGGFALGRTCCVGSAGSQRSP*AGKCRQ
Trigger: CTGCCTGCATTTTCCTGCGCAAGGGCTTCGCTGAGA...GCCAGCAGACCCCACACAGCATGTCCGCCCCAGGGCAAAGCCTCCCACCTTCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000453000.1
CDS-3UTR CCA 90 bp CCGCCAGTACATCCTGGGCTCTCGGCGGCTACAGCGGGTGAGGCAAGCTCTAGCATGACTGCGCAGTTCTaGGCCAGCATCAGGAGCGGT +
Preference number: 4 (lower is better)
Translates to: PPVHPGLSAATAGEASSSMTAQF*ASIRSG
Trigger: ACCGCTCCTGATGCTGGCCCAGAACTGCGCAGTCAT...GCTAGAGCTTGCCTCACCCGCTGTAGCCGCCGAGAGCCCAGGATGTACTGGCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288616.7
ENST00000453000.1
CDS-3UTR CCA 90 bp CGCCCCCGCTTTCCAGTTGCAGGAGTTAGTCTTTCACAGTGCGGAGGGGTGGGGTGGGAGGCTTTGCCCTaGGGCGGACATGCTGTGTGG +
Preference number: 4 (lower is better)
Translates to: RPRFPVAGVSLSQCGGVGWEALP*GGHAVW
Trigger: CCACACAGCATGTCCGCCCCAGGGCAAAGCCTCCCA...CCCCACCCCTCCGCACTGTGAAAGACTAACTCCTGCAACTGGAAAGCGGGGGCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000316803.7
ENST00000453000.1
CDS-3UTR CCA 90 bp CGGGTGAGGCAAGCTCTAGCTCCTCTTAGCCCCGCCTTTGGGAGCTTGGCAGTCTGGGAGGCTTTGCCCTaGGGCGGACATGCTGTGTGG +
Preference number: 4 (lower is better)
Translates to: RVRQALAPLSPAFGSLAVWEALP*GGHAVW
Trigger: CCACACAGCATGTCCGCCCCAGGGCAAAGCCTCCCA...GACTGCCAAGCTCCCAAAGGCGGGGCTAAGAGGAGCTAGAGCTTGCCTCACCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316803.7
ENST00000453000.1
CDS-3UTR CCA 90 bp CCCATCCGCCAGTACATCCTGGGCTCTCGGCGGCTACAGCGGGTGAGGCAAGCTCATGGAGACCAGGCTTaGCTGGTCTGCCAGACCAGA +
Preference number: 4 (lower is better)
Translates to: PIRQYILGSRRLQRVRQAHGDQA*LVCQTR
Trigger: TCTGGTCTGGCAGACCAGCCAAGCCTGGTCTCCATG...AGCTTGCCTCACCCGCTGTAGCCGCCGAGAGCCCAGGATGTACTGGCGGATGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453000.1
CDS-3UTR TCA 90 bp CGGCGGCTACAGCGGGTGAGGCAAGCTCTAGCTCCTCTTAGCCCCGCCTTTGGGTTGCCCATCCTAAGTTaGGGCAGCCCCTCTTGGGAT +
Preference number: 4 (lower is better)
Translates to: RRLQRVRQALAPLSPAFGLPILS*GSPSWD
Trigger: ATCCCAAGAGGGGCTGCCTCAACTTAGGATGGGCAA...CCCAAAGGCGGGGCTAAGAGGAGCTAGAGCTTGCCTCACCCGCTGTAGCCGCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288616.7
ENST00000351200.6
CDS-3UTR TCA 90 bp CGGGTGAGGCAAGCTCTAGCTCCTCTTAGCCCCGCCTTTGGGAGCTTGGCAGTCGCTGGGACAGTTCGATaGGCTCCATCTCGGTGGGCA +
Preference number: 4 (lower is better)
Translates to: RVRQALAPLSPAFGSLAVAGTVR*APSRWA
Trigger: TGCCCACCGAGATGGAGCTCATCGAACTGTCCCAGC...GACTGCCAAGCTCCCAAAGGCGGGGCTAAGAGGAGCTAGAGCTTGCCTCACCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288616.7
ENST00000316803.7
ENST00000351200.6
ENST00000453000.1
CDS-3UTR TCA 90 bp AGGCCCCATCCGCCAGTACATCCTGGGCTCTCGGCGGCTACAGCGGGTGAGGCACACCCAGGTTCATGTTaGTCTGCTGGGACAGTTCGA +
Preference number: 4 (lower is better)
Translates to: RPHPPVHPGLSAATAGEAHPGSC*SAGTVR
Trigger: TCGAACTGTCCCAGCAGATCAACATGAACCTGGGTG...TGCCTCACCCGCTGTAGCCGCCGAGAGCCCAGGATGTACTGGCGGATGGGGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288616.7
ENST00000316803.7
ENST00000351200.6
ENST00000453000.1
CDS-3UTR GCA 90 bp CCGCCAGTACATCCTGGGCTCTCGGCGGCTACAGCGGGTGAGGCAAGCTCTAGCGCTCTCTTACTCGTCTaGCTGCTCCTGCTCTCCGAT +
Preference number: 4 (lower is better)
Translates to: PPVHPGLSAATAGEASSSALLLV*LLLLSD
Trigger: ATCGGAGAGCAGGAGCAGGCAGACGAGTAAGAGAGC...GCTAGAGCTTGCCTCACCCGCTGTAGCCGCCGAGAGCCCAGGATGTACTGGCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288616.7
CDS-3UTR GCA 90 bp CTACAGCGGGTGAGGCAAGCTCTAGCTCCTCTTAGCCCCGCCTTTGGGAGCTTGTTCCGTCCCAGTCTCTaGCAACCCCAGCCTCCCTCC +
Preference number: 4 (lower is better)
Translates to: LQRVRQALAPLSPAFGSLFRPSL*QPQPPS
Trigger: GGAGGGAGGCTGGGGTTGGCAGAGACTGGGACGGAA...CAAGCTCCCAAAGGCGGGGCTAAGAGGAGCTAGAGCTTGCCTCACCCGCTGTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288616.7
ENST00000351200.6
CDS-3UTR GCA 90 bp GTACATCCTGGGCTCTCGGCGGCTACAGCGGGTGAGGCAAGCTCTAGCTCCTCTGGGCCCAGCAGGTTGTaGATGACTGCGCAGTTCTGG +
Preference number: 4 (lower is better)
Translates to: VHPGLSAATAGEASSSSSGPSRL*MTAQFW
Trigger: CCAGAACTGCGCAGTCATGCACAACCTGCTGGGCCC...AGAGGAGCTAGAGCTTGCCTCACCCGCTGTAGCCGCCGAGAGCCCAGGATGTAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288616.7
ENST00000453000.1
CDS-3UTR GCA 90 bp GGCCCCATCCGCCAGTACATCCTGGGCTCTCGGCGGCTACAGCGGGTGAGGCAAAGTGATCTATCAGGCTaGCTGTTCTCAGCGAAGCCC +
Preference number: 4 (lower is better)
Translates to: GPIRQYILGSRRLQRVRQSDLSG*LFSAKP
Trigger: GGGCTTCGCTGAGAACAGGCAGCCTGATAGATCACT...TTGCCTCACCCGCTGTAGCCGCCGAGAGCCCAGGATGTACTGGCGGATGGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288616.7
ENST00000453000.1
CDS-3UTR GCA 90 bp CACATGGCCCTTGGCGCCTGGCATGACCTCTGCCGGCTTGGCACGGTGGCCTCCCATATCTGCTGTCTCTaGCAGGAGTTTAGGCCCCAT +
Preference number: 4 (lower is better)
Translates to: HMALGAWHDLCRLGTVASHICCL*QEFRPH
Trigger: ATGGGGCCTAAACTCCTGGCAGAGACAGCAGATATG...GGAGGCCACCGTGCCAAGCCGGCAGAGGTCATGCCAGGCGCCAAGGGCCATGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316803.7
ENST00000453000.1
CDS-3UTR GCA 90 bp TACATCCTGGGCTCTCGGCGGCTACAGCGGGTGAGGCAAGCTCTAGCTCCTCTTGAAGGTGGGAGGCTTTaGCCTGGGGCGGACATGCTG +
Preference number: 4 (lower is better)
Translates to: YILGSRRLQRVRQALAPLEGGRL*PGADML
Trigger: CAGCATGTCCGCCCCAGGGCAAAGCCTCCCACCTTC...AAGAGGAGCTAGAGCTTGCCTCACCCGCTGTAGCCGCCGAGAGCCCAGGATGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316803.7
ENST00000453000.1
CDS-3UTR GCA 90 bp TCTGAGATAACAGGGCTGAGGCGAGCTGGGACGGGCGCAGAGCGAAGGTGGGAGCAGGCTTGGCTGGTCTaGCAGACCAGAGGTTGCACA +
Preference number: 4 (lower is better)
Translates to: SEITGLRRAGTGAERRWEQAWLV*QTRGCT
Trigger: TGTGCAACCTCTGGTCTGGCAGACCAGCCAAGCCTG...CTCCCACCTTCGCTCTGCGCCCGTCCCAGCTCGCCTCAGCCCTGTTATCTCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453000.1
CDS-3UTR CCA 90 bp ATCCTGGGCTCTCGGCGGCTACAGCGGGTGAGGCAAGCTCTAGCTCCTCTTAGCTCGGAGCTGGCAGCATaGAGACCAGGCTTGGCTGGT +
Preference number: 4 (lower is better)
Translates to: ILGSRRLQRVRQALAPLSSELAA*RPGLAG
Trigger: ACCAGCCAAGCCTGGTCTCCATGCTGCCAGCTCCGA...GCTAAGAGGAGCTAGAGCTTGCCTCACCCGCTGTAGCCGCCGAGAGCCCAGGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453000.1
CDS-3UTR TCA 90 bp GCTCTAGCTCCTCTTAGCCCCGCCTTTGGGAGCTTGGCAGTCCTGGAGGGGCCCCCTTGTCGAATTCTCTaGAGGCCTCTCGGAGCTCTT +
Preference number: 4 (lower is better)
Translates to: ALAPLSPAFGSLAVLEGPPCRIL*RPLGAL
Trigger: AAGAGCTCCGAGAGGCCTTCAGAGAATTCGACAAGG...GGGCCCCTCCAGGACTGCCAAGCTCCCAAAGGCGGGGCTAAGAGGAGCTAGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000288616.7
ENST00000316803.7
ENST00000351200.6
ENST00000453000.1
CDS-3UTR TCA 90 bp GGCGCCCCCGCTTTCCAGTTGCAGGAGTTAGTCTTTCACAGTGCGGAGGGGTGGGGGTTCAGAGAGCCCTaGGCGTGCACAGGCATCAAA +
Preference number: 4 (lower is better)
Translates to: GAPAFQLQELVFHSAEGWGFREP*ACTGIK
Trigger: TTTGATGCCTGTGCACGCTCAGGGCTCTCTGAACCC...CCACCCCTCCGCACTGTGAAAGACTAACTCCTGCAACTGGAAAGCGGGGGCGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000453000.1
CDS-3UTR GCA 90 bp AGGCCCCATCCGCCAGTACATCCTGGGCTCTCGGCGGCTACAGCGGGTGAGGCACAAGCTGGAGAAGGCTaGCGGATCATCTACATCAGA +
Preference number: 4 (lower is better)
Translates to: RPHPPVHPGLSAATAGEAQAGEG*RIIYIR
Trigger: TCTGATGTAGATGATCCGGCAGCCTTCTCCAGCTTG...TGCCTCACCCGCTGTAGCCGCCGAGAGCCCAGGATGTACTGGCGGATGGGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288616.7
CDS-3UTR GCA 90 bp AGGCAAGCTCTAGCTCCTCTTAGCCCCGCCTTTGGGAGCTTGGCAGTCCTGGAGGGGCCCAGCAGGTTGTaGATGACTGCGCAGTTCTGG +
Preference number: 4 (lower is better)
Translates to: RQALAPLSPAFGSLAVLEGPSRL*MTAQFW
Trigger: CCAGAACTGCGCAGTCATGCACAACCTGCTGGGCCC...CTCCAGGACTGCCAAGCTCCCAAAGGCGGGGCTAAGAGGAGCTAGAGCTTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288616.7
ENST00000453000.1
CDS-3UTR GCA 90 bp GGGGTGCAGGCAGGCCCCATCCGCCAGTACATCCTGGGCTCTCGGCGGCTACAGAGGTTCATGTTGATCTaGTGGGACAGTTCGATGAGC +
Preference number: 4 (lower is better)
Translates to: GVQAGPIRQYILGSRRLQRFMLI*WDSSMS
Trigger: GCTCATCGAACTGTCCCAGCAGATCAACATGAACCT...CTGTAGCCGCCGAGAGCCCAGGATGTACTGGCGGATGGGGCCTGCCTGCACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288616.7
ENST00000316803.7
ENST00000351200.6
ENST00000453000.1
CDS-3UTR GCA 90 bp CTACAGCGGGTGAGGCAAGCTCTAGCTCCTCTTAGCCCCGCCTTTGGGAGCTTGGTTAGTCTTTCACAGTaGGGAGGGGTGGGGGTCCGG +
Preference number: 4 (lower is better)
Translates to: LQRVRQALAPLSPAFGSLVSLSQ*GGVGVR
Trigger: CCGGACCCCCACCCCTCCGCACTGTGAAAGACTAAC...CAAGCTCCCAAAGGCGGGGCTAAGAGGAGCTAGAGCTTGCCTCACCCGCTGTAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000316803.7
ENST00000453000.1
CDS-3UTR GCA 90 bp TCTGAGATAACAGGGCTGAGGCGAGCTGGGACGGGCGCAGAGCGAAGGTGGGAGCCTCTGTGTGGCACATaGGCACACACACACACACAC +
Preference number: 4 (lower is better)
Translates to: SEITGLRRAGTGAERRWEPLCGT*AHTHTH
Trigger: GTGTGTGTGTGTGTGTGCGCATGTGCCACACAGAGG...CTCCCACCTTCGCTCTGCGCCCGTCCCAGCTCGCCTCAGCCCTGTTATCTCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453000.1
CDS-3UTR CCA 90 bp GCTCTAGCTCCTCTTAGCCCCGCCTTTGGGAGCTTGGCAGTCCTGGAGGGGCCCTCAGCAGCGACGTCTTaGACTCGCTTTTGGCGATGT +
Preference number: 4 (lower is better)
Translates to: ALAPLSPAFGSLAVLEGPSAATS*TRFWRC
Trigger: ACATCGCCAAAAGCGAGTCCAAGACGTCGCTGCTGA...GGGCCCCTCCAGGACTGCCAAGCTCCCAAAGGCGGGGCTAAGAGGAGCTAGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000316803.7
CDS-3UTR TCA 90 bp CAAGCTCTAGCTCCTCTTAGCCCCGCCTTTGGGAGCTTGGCAGTCCTGGAGGGGTTGCCCATCCTAAGTTaGGGCAGCCCCTCTTGGGAT +
Preference number: 4 (lower is better)
Translates to: QALAPLSPAFGSLAVLEGLPILS*GSPSWD
Trigger: ATCCCAAGAGGGGCTGCCTCAACTTAGGATGGGCAA...CCCCTCCAGGACTGCCAAGCTCCCAAAGGCGGGGCTAAGAGGAGCTAGAGCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000288616.7
ENST00000351200.6
CDS-3UTR TCA 90 bp CATCCGCCAGTACATCCTGGGCTCTCGGCGGCTACAGCGGGTGAGGCAAGCTCTTTCCTCTGGTCGCAGTaGTCTATCAGGCTGCCTGTT +
Preference number: 4 (lower is better)
Translates to: HPPVHPGLSAATAGEASSFLWSQ*SIRLPV
Trigger: AACAGGCAGCCTGATAGATCACTGCGACCAGAGGAA...AGAGCTTGCCTCACCCGCTGTAGCCGCCGAGAGCCCAGGATGTACTGGCGGATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288616.7
ENST00000453000.1
CDS-3UTR GCA 90 bp AGGCCCCATCCGCCAGTACATCCTGGGCTCTCGGCGGCTACAGCGGGTGAGGCATCTTACTCGTCTGCCTaGTCCTGCTCTCCGATTTTT +
Preference number: 4 (lower is better)
Translates to: RPHPPVHPGLSAATAGEASYSSA*SCSPIF
Trigger: AAAAATCGGAGAGCAGGAGCAGGCAGACGAGTAAGA...TGCCTCACCCGCTGTAGCCGCCGAGAGCCCAGGATGTACTGGCGGATGGGGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288616.7
CDS-3UTR GCA 90 bp GTACATCCTGGGCTCTCGGCGGCTACAGCGGGTGAGGCAAGCTCTAGCTCCTCTCAGGTTGTGCATGACTaGGCAGTTCTGGGCCAGCAT +
Preference number: 4 (lower is better)
Translates to: VHPGLSAATAGEASSSSSQVVHD*AVLGQH
Trigger: ATGCTGGCCCAGAACTGCGCAGTCATGCACAACCTG...AGAGGAGCTAGAGCTTGCCTCACCCGCTGTAGCCGCCGAGAGCCCAGGATGTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288616.7
ENST00000453000.1
CDS-3UTR GCA 90 bp GTACATCCTGGGCTCTCGGCGGCTACAGCGGGTGAGGCAAGCTCTAGCTCCTCTTCTCAGCGAAGCCCTTaGGCAGGAAAATGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: VHPGLSAATAGEASSSSSSQRSP*AGKCRQ
Trigger: CTGCCTGCATTTTCCTGCGCAAGGGCTTCGCTGAGA...AGAGGAGCTAGAGCTTGCCTCACCCGCTGTAGCCGCCGAGAGCCCAGGATGTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288616.7
ENST00000453000.1
CDS-3UTR GCA 90 bp CCGCCAGTACATCCTGGGCTCTCGGCGGCTACAGCGGGTGAGGCAAGCTCTAGCCATATCTGCTGTCTCTaGCAGGAGTTTAGGCCCCAT +
Preference number: 4 (lower is better)
Translates to: PPVHPGLSAATAGEASSSHICCL*QEFRPH
Trigger: ATGGGGCCTAAACTCCTGGCAGAGACAGCAGATATG...GCTAGAGCTTGCCTCACCCGCTGTAGCCGCCGAGAGCCCAGGATGTACTGGCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288616.7
ENST00000316803.7
ENST00000351200.6
ENST00000453000.1
CDS-3UTR GCA 90 bp CGGCGGCTACAGCGGGTGAGGCAAGCTCTAGCTCCTCTTAGCCCCGCCTTTGGGCTCGCAGCTCACTGGTaGTTATTTCCCCATCACCAT +
Preference number: 4 (lower is better)
Translates to: RRLQRVRQALAPLSPAFGLAAHW*LFPHHH
Trigger: ATGGTGATGGGGAAATAAGCACCAGTGAGCTGCGAG...CCCAAAGGCGGGGCTAAGAGGAGCTAGAGCTTGCCTCACCCGCTGTAGCCGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288616.7
ENST00000316803.7
ENST00000351200.6
ENST00000453000.1
CDS-3UTR GCA 90 bp CCGCCAGTACATCCTGGGCTCTCGGCGGCTACAGCGGGTGAGGCAAGCTCTAGCCTCGCAGCTCACTGGTaGTTATTTCCCCATCACCAT +
Preference number: 4 (lower is better)
Translates to: PPVHPGLSAATAGEASSSLAAHW*LFPHHH
Trigger: ATGGTGATGGGGAAATAAGCACCAGTGAGCTGCGAG...GCTAGAGCTTGCCTCACCCGCTGTAGCCGCCGAGAGCCCAGGATGTACTGGCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288616.7
ENST00000316803.7
ENST00000351200.6
ENST00000453000.1
CDS-3UTR GCA 90 bp CCGCCAGTACATCCTGGGCTCTCGGCGGCTACAGCGGGTGAGGCAAGCTCTAGCGGCAAAGTGGAAACATaGCCCCTCCTTTTTCGTGTG +
Preference number: 4 (lower is better)
Translates to: PPVHPGLSAATAGEASSSGKVET*PLLFRV
Trigger: CACACGAAAAAGGAGGGGGCATGTTTCCACTTTGCC...GCTAGAGCTTGCCTCACCCGCTGTAGCCGCCGAGAGCCCAGGATGTACTGGCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000453000.1
CDS-3UTR GCA 90 bp ATCCTGGGCTCTCGGCGGCTACAGCGGGTGAGGCAAGCTCTAGCTCCTCTTAGCTGCCAGACCAGAGGTTaGACATGCAGGTGCCATTGC +
Preference number: 4 (lower is better)
Translates to: ILGSRRLQRVRQALAPLSCQTRG*TCRCHC
Trigger: GCAATGGCACCTGCATGTGCAACCTCTGGTCTGGCA...GCTAAGAGGAGCTAGAGCTTGCCTCACCCGCTGTAGCCGCCGAGAGCCCAGGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453000.1
CDS-3UTR GCA 90 bp GGGAGGCTTTGCCCTGGGGCGGACATGCTGTGTGGGGTCTGCTGGCGGGCTCCCACTGGCACATACATATaGACAGAATCACACACCCAA +
Preference number: 4 (lower is better)
Translates to: GRLCPGADMLCGVCWRAPTGTYI*TESHTQ
Trigger: TTGGGTGTGTGATTCTGTGCATATGTATGTGCCAGT...GGGAGCCCGCCAGCAGACCCCACACAGCATGTCCGCCCCAGGGCAAAGCCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453000.1
CDS-3UTR CCA 90 bp TCTGAGATAACAGGGCTGAGGCGAGCTGGGACGGGCGCAGAGCGAAGGTGGGAGCTCCTTTTTCGTGTGTaGCTAGTGCACTCTGTCGCC +
Preference number: 4 (lower is better)
Translates to: SEITGLRRAGTGAERRWELLFRV*LVHSVA
Trigger: GGCGACAGAGTGCACTAGCCACACACGAAAAAGGAG...CTCCCACCTTCGCTCTGCGCCCGTCCCAGCTCGCCTCAGCCCTGTTATCTCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000453000.1
CDS-3UTR CCA 90 bp CAGTACATCCTGGGCTCTCGGCGGCTACAGCGGGTGAGGCAAGCTCTAGCTCCTGGGACTGGGGCAAAGTaGAAACATGCCCCCTCCTTT +
Preference number: 4 (lower is better)
Translates to: QYILGSRRLQRVRQALAPGTGAK*KHAPSF
Trigger: AAAGGAGGGGGCATGTTTCCACTTTGCCCCAGTCCC...AGGAGCTAGAGCTTGCCTCACCCGCTGTAGCCGCCGAGAGCCCAGGATGTACTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000453000.1
CDS-3UTR TCA 90 bp AGGCCCCATCCGCCAGTACATCCTGGGCTCTCGGCGGCTACAGCGGGTGAGGCAACTTTCTTAAGGAGATaGAAGCAGAAGGGGAGAGTG +
Preference number: 4 (lower is better)
Translates to: RPHPPVHPGLSAATAGEATFLRR*KQKGRV
Trigger: CACTCTCCCCTTCTGCTTTCATCTCCTTAAGAAAGT...TGCCTCACCCGCTGTAGCCGCCGAGAGCCCAGGATGTACTGGCGGATGGGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288616.7
CDS-3UTR TCA 90 bp TCGTCGGCGGGCGCCCCCGCTTTCCAGTTGCAGGAGTTAGTCTTTCACAGTGCGCCTTGTCGAATTCTCTaGAGGCCTCTCGGAGCTCTT +
Preference number: 4 (lower is better)
Translates to: SSAGAPAFQLQELVFHSAPCRIL*RPLGAL
Trigger: AAGAGCTCCGAGAGGCCTTCAGAGAATTCGACAAGG...CGCACTGTGAAAGACTAACTCCTGCAACTGGAAAGCGGGGGCGCCCGCCGACGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316803.7
ENST00000453000.1
CDS-3UTR TCA 90 bp AGGCAAGCTCTAGCTCCTCTTAGCCCCGCCTTTGGGAGCTTGGCAGTCCTGGAGCCAGATCCCGGCAGTTaGTGTAGCCATCCTTGTCCT +
Preference number: 4 (lower is better)
Translates to: RQALAPLSPAFGSLAVLEPDPGS*CSHPCP
Trigger: AGGACAAGGATGGCTACATCAACTGCCGGGATCTGG...CTCCAGGACTGCCAAGCTCCCAAAGGCGGGGCTAAGAGGAGCTAGAGCTTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288616.7
ENST00000316803.7
ENST00000351200.6
ENST00000453000.1
CDS-3UTR TCA 90 bp CAGCGGGTGAGGCAAGCTCTAGCTCCTCTTAGCCCCGCCTTTGGGAGCTTGGCACACCCAGGTTCATGTTaGTCTGCTGGGACAGTTCGA +
Preference number: 4 (lower is better)
Translates to: QRVRQALAPLSPAFGSLAHPGSC*SAGTVR
Trigger: TCGAACTGTCCCAGCAGATCAACATGAACCTGGGTG...TGCCAAGCTCCCAAAGGCGGGGCTAAGAGGAGCTAGAGCTTGCCTCACCCGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288616.7
ENST00000316803.7
ENST00000351200.6
ENST00000453000.1
CDS-3UTR GCA 90 bp AGGCAAGCTCTAGCTCCTCTTAGCCCCGCCTTTGGGAGCTTGGCAGTCCTGGAGCAGGTTGTGCATGACTaGGCAGTTCTGGGCCAGCAT +
Preference number: 4 (lower is better)
Translates to: RQALAPLSPAFGSLAVLEQVVHD*AVLGQH
Trigger: ATGCTGGCCCAGAACTGCGCAGTCATGCACAACCTG...CTCCAGGACTGCCAAGCTCCCAAAGGCGGGGCTAAGAGGAGCTAGAGCTTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288616.7
ENST00000453000.1
CDS-3UTR GCA 90 bp GTACATCCTGGGCTCTCGGCGGCTACAGCGGGTGAGGCAAGCTCTAGCTCCTCTAGTGATCTATCAGGCTaGCTGTTCTCAGCGAAGCCC +
Preference number: 4 (lower is better)
Translates to: VHPGLSAATAGEASSSSSSDLSG*LFSAKP
Trigger: GGGCTTCGCTGAGAACAGGCAGCCTGATAGATCACT...AGAGGAGCTAGAGCTTGCCTCACCCGCTGTAGCCGCCGAGAGCCCAGGATGTAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288616.7
ENST00000453000.1
CDS-3UTR GCA 90 bp CGGCGGCTACAGCGGGTGAGGCAAGCTCTAGCTCCTCTTAGCCCCGCCTTTGGGAGGTTCATGTTGATCTaGTGGGACAGTTCGATGAGC +
Preference number: 4 (lower is better)
Translates to: RRLQRVRQALAPLSPAFGRFMLI*WDSSMS
Trigger: GCTCATCGAACTGTCCCAGCAGATCAACATGAACCT...CCCAAAGGCGGGGCTAAGAGGAGCTAGAGCTTGCCTCACCCGCTGTAGCCGCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288616.7
ENST00000316803.7
ENST00000351200.6
ENST00000453000.1
CDS-3UTR GCA 90 bp GTGCAGGCAGGCCCCATCCGCCAGTACATCCTGGGCTCTCGGCGGCTACAGCGGTACACCAATCATATCTaGTGTCTCTGCCAGGAGTTT +
Preference number: 4 (lower is better)
Translates to: VQAGPIRQYILGSRRLQRYTNHI*CLCQEF
Trigger: AAACTCCTGGCAGAGACAGCAGATATGATTGGTGTA...CCGCTGTAGCCGCCGAGAGCCCAGGATGTACTGGCGGATGGGGCCTGCCTGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288616.7
ENST00000316803.7
ENST00000351200.6
ENST00000453000.1
CDS-3UTR CCA 90 bp CAGCGGGTGAGGCAAGCTCTAGCTCCTCTTAGCCCCGCCTTTGGGAGCTTGGCACCCAGAAAGGGAAGCTaGCTAGTTTGGGTTCCCGAA +
Preference number: 4 (lower is better)
Translates to: QRVRQALAPLSPAFGSLAPRKGS*LVWVPE
Trigger: TTCGGGAACCCAAACTAGCCAGCTTCCCTTTCTGGG...TGCCAAGCTCCCAAAGGCGGGGCTAAGAGGAGCTAGAGCTTGCCTCACCCGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288616.7
CDS-3UTR CCA 90 bp TACATCCTGGGCTCTCGGCGGCTACAGCGGGTGAGGCAAGCTCTAGCTCCTCTTAGAGGGGAACCAAGCTaGAGAAGGCTGCCGGATCAT +
Preference number: 4 (lower is better)
Translates to: YILGSRRLQRVRQALAPLRGEPS*RRLPDH
Trigger: ATGATCCGGCAGCCTTCTCCAGCTTGGTTCCCCTCT...AAGAGGAGCTAGAGCTTGCCTCACCCGCTGTAGCCGCCGAGAGCCCAGGATGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288616.7
CDS-3UTR CCA 90 bp GGGGTGCAGGCAGGCCCCATCCGCCAGTACATCCTGGGCTCTCGGCGGCTACAGTCATCAAAATCTACATaGCCACCCAGGTTCATGTTG +
Preference number: 4 (lower is better)
Translates to: GVQAGPIRQYILGSRRLQSSKST*PPRFML
Trigger: CAACATGAACCTGGGTGGCCATGTAGATTTTGATGA...CTGTAGCCGCCGAGAGCCCAGGATGTACTGGCGGATGGGGCCTGCCTGCACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288616.7
ENST00000316803.7
ENST00000351200.6
ENST00000453000.1
CDS-3UTR CCA 90 bp CAAGCTCTAGCTCCTCTTAGCCCCGCCTTTGGGAGCTTGGCAGTCCTGGAGGGGCCTCTCGCAGCTCACTaGTGCTTATTTCCCCATCAC +
Preference number: 4 (lower is better)
Translates to: QALAPLSPAFGSLAVLEGPLAAH*CLFPHH
Trigger: GTGATGGGGAAATAAGCACCAGTGAGCTGCGAGAGG...CCCCTCCAGGACTGCCAAGCTCCCAAAGGCGGGGCTAAGAGGAGCTAGAGCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288616.7
ENST00000316803.7
ENST00000351200.6
ENST00000453000.1
CDS-3UTR CCA 90 bp GTACATCCTGGGCTCTCGGCGGCTACAGCGGGTGAGGCAAGCTCTAGCTCCTCTTCTTGGACTCGCTTTTaGCGATGTGCGAGCTCATCG +
Preference number: 4 (lower is better)
Translates to: VHPGLSAATAGEASSSSSSWTRF*RCASSS
Trigger: CGATGAGCTCGCACATCGCCAAAAGCGAGTCCAAGA...AGAGGAGCTAGAGCTTGCCTCACCCGCTGTAGCCGCCGAGAGCCCAGGATGTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316803.7
CDS-3UTR CCA 90 bp AATATTTTTATTGGTTCTGAGATAACAGGGCTGAGGCGAGCTGGGACGGGCGCACTGTGTGGGGTCTGCTaGCGGGCTCCCTGGCCCACC +
Preference number: 4 (lower is better)
Translates to: NIFIGSEITGLRRAGTGALCGVC*RAPWPT
Trigger: GGTGGGCCAGGGAGCCCGCCAGCAGACCCCACACAG...TGCGCCCGTCCCAGCTCGCCTCAGCCCTGTTATCTCAGAACCAATAAAAATATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000453000.1
CDS-3UTR CCA 90 bp CCCATCCGCCAGTACATCCTGGGCTCTCGGCGGCTACAGCGGGTGAGGCAAGCTGCACAGGCATCAAATTaGTCCAACAGACAGAGTCTC +
Preference number: 4 (lower is better)
Translates to: PIRQYILGSRRLQRVRQAAQASN*SNRQSL
Trigger: GAGACTCTGTCTGTTGGACCAATTTGATGCCTGTGC...AGCTTGCCTCACCCGCTGTAGCCGCCGAGAGCCCAGGATGTACTGGCGGATGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453000.1
CDS-3UTR TCA 90 bp AGGCAAGCTCTAGCTCCTCTTAGCCCCGCCTTTGGGAGCTTGGCAGTCCTGGAGCACCCAGGTTCATGTTaGTCTGCTGGGACAGTTCGA +
Preference number: 4 (lower is better)
Translates to: RQALAPLSPAFGSLAVLEHPGSC*SAGTVR
Trigger: TCGAACTGTCCCAGCAGATCAACATGAACCTGGGTG...CTCCAGGACTGCCAAGCTCCCAAAGGCGGGGCTAAGAGGAGCTAGAGCTTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288616.7
ENST00000316803.7
ENST00000351200.6
ENST00000453000.1
CDS-3UTR GCA 90 bp ATCCTGGGCTCTCGGCGGCTACAGCGGGTGAGGCAAGCTCTAGCTCCTCTTAGCCATATCTGCTGTCTCTaGCAGGAGTTTAGGCCCCAT +
Preference number: 4 (lower is better)
Translates to: ILGSRRLQRVRQALAPLSHICCL*QEFRPH
Trigger: ATGGGGCCTAAACTCCTGGCAGAGACAGCAGATATG...GCTAAGAGGAGCTAGAGCTTGCCTCACCCGCTGTAGCCGCCGAGAGCCCAGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288616.7
ENST00000316803.7
ENST00000351200.6
ENST00000453000.1
CDS-3UTR GCA 90 bp CTCGTCGGCGGGCGCCCCCGCTTTCCAGTTGCAGGAGTTAGTCTTTCACAGTGCCATATCTGCTGTCTCTaGCAGGAGTTTAGGCCCCAT +
Preference number: 4 (lower is better)
Translates to: LVGGRPRFPVAGVSLSQCHICCL*QEFRPH
Trigger: ATGGGGCCTAAACTCCTGGCAGAGACAGCAGATATG...GCACTGTGAAAGACTAACTCCTGCAACTGGAAAGCGGGGGCGCCCGCCGACGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316803.7
ENST00000453000.1
CDS-3UTR GCA 90 bp CAGCGGGTGAGGCAAGCTCTAGCTCCTCTTAGCCCCGCCTTTGGGAGCTTGGCACTCGCAGCTCACTGGTaGTTATTTCCCCATCACCAT +
Preference number: 4 (lower is better)
Translates to: QRVRQALAPLSPAFGSLALAAHW*LFPHHH
Trigger: ATGGTGATGGGGAAATAAGCACCAGTGAGCTGCGAG...TGCCAAGCTCCCAAAGGCGGGGCTAAGAGGAGCTAGAGCTTGCCTCACCCGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288616.7
ENST00000316803.7
ENST00000351200.6
ENST00000453000.1
CDS-3UTR CCA 90 bp GGCCCCATCCGCCAGTACATCCTGGGCTCTCGGCGGCTACAGCGGGTGAGGCAATCATCAAAATCTACATaGCCACCCAGGTTCATGTTG +
Preference number: 4 (lower is better)
Translates to: GPIRQYILGSRRLQRVRQSSKST*PPRFML
Trigger: CAACATGAACCTGGGTGGCCATGTAGATTTTGATGA...TTGCCTCACCCGCTGTAGCCGCCGAGAGCCCAGGATGTACTGGCGGATGGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288616.7
ENST00000316803.7
ENST00000351200.6
ENST00000453000.1
CDS-3UTR CCA 90 bp GCTCTAGCTCCTCTTAGCCCCGCCTTTGGGAGCTTGGCAGTCCTGGAGGGGCCCTTTCCCCATCACCATTaGTGTCAAACTCTCGGAAAG +
Preference number: 4 (lower is better)
Translates to: ALAPLSPAFGSLAVLEGPFPHHH*CQTLGK
Trigger: CTTTCCGAGAGTTTGACACCAATGGTGATGGGGAAA...GGGCCCCTCCAGGACTGCCAAGCTCCCAAAGGCGGGGCTAAGAGGAGCTAGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288616.7
ENST00000316803.7
ENST00000351200.6
ENST00000453000.1
CDS-3UTR CCA 90 bp GCAGAGCGAAGGTGGGAGGCTTTGCCCTGGGGCGGACATGCTGTGTGGGGTCTGTTTCCCCATCACCATTaGTGTCAAACTCTCGGAAAG +
Preference number: 4 (lower is better)
Translates to: AERRWEALPWGGHAVWGLFPHHH*CQTLGK
Trigger: CTTTCCGAGAGTTTGACACCAATGGTGATGGGGAAA...CAGACCCCACACAGCATGTCCGCCCCAGGGCAAAGCCTCCCACCTTCGCTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000316803.7
ENST00000453000.1
CDS-3UTR CCA 90 bp GTGAGGCAAGCTCTAGCTCCTCTTAGCCCCGCCTTTGGGAGCTTGGCAGTCCTGCCTCTCGCAGCTCACTaGTGCTTATTTCCCCATCAC +
Preference number: 4 (lower is better)
Translates to: VRQALAPLSPAFGSLAVLPLAAH*CLFPHH
Trigger: GTGATGGGGAAATAAGCACCAGTGAGCTGCGAGAGG...CAGGACTGCCAAGCTCCCAAAGGCGGGGCTAAGAGGAGCTAGAGCTTGCCTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288616.7
ENST00000316803.7
ENST00000351200.6
ENST00000453000.1
CDS-3UTR CCA 90 bp GTACATCCTGGGCTCTCGGCGGCTACAGCGGGTGAGGCAAGCTCTAGCTCCTCTTTCATGTTGATCTGCTaGGACAGTTCGATGAGCTCC +
Preference number: 4 (lower is better)
Translates to: VHPGLSAATAGEASSSSSFMLIC*DSSMSS
Trigger: GGAGCTCATCGAACTGTCCCAGCAGATCAACATGAA...AGAGGAGCTAGAGCTTGCCTCACCCGCTGTAGCCGCCGAGAGCCCAGGATGTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288616.7
ENST00000316803.7
ENST00000351200.6
ENST00000453000.1
CDS-3UTR CCA 90 bp CAAGCTCTAGCTCCTCTTAGCCCCGCCTTTGGGAGCTTGGCAGTCCTGGAGGGGTTCATGTTGATCTGCTaGGACAGTTCGATGAGCTCC +
Preference number: 4 (lower is better)
Translates to: QALAPLSPAFGSLAVLEGFMLIC*DSSMSS
Trigger: GGAGCTCATCGAACTGTCCCAGCAGATCAACATGAA...CCCCTCCAGGACTGCCAAGCTCCCAAAGGCGGGGCTAAGAGGAGCTAGAGCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288616.7
ENST00000316803.7
ENST00000351200.6
ENST00000453000.1
CDS-3UTR CCA 90 bp CGCAGAGCGAAGGTGGGAGGCTTTGCCCTGGGGCGGACATGCTGTGTGGGGTCTTTCTATTCTCACCAATaGGAAGTGTTCACTCAGAGC +
Preference number: 4 (lower is better)
Translates to: RRAKVGGFALGRTCCVGSFYSHQ*EVFTQS
Trigger: GCTCTGAGTGAACACTTCCCATTGGTGAGAATAGAA...AGACCCCACACAGCATGTCCGCCCCAGGGCAAAGCCTCCCACCTTCGCTCTGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453000.1
CDS-3UTR TCA 90 bp CAAGCTCTAGCTCCTCTTAGCCCCGCCTTTGGGAGCTTGGCAGTCCTGGAGGGGCTGGCACATCTTCCTTaGGAGATTTCTCAGTGGATA +
Preference number: 4 (lower is better)
Translates to: QALAPLSPAFGSLAVLEGLAHLP*EISQWI
Trigger: TATCCACTGAGAAATCTCTCAAGGAAGATGTGCCAG...CCCCTCCAGGACTGCCAAGCTCCCAAAGGCGGGGCTAAGAGGAGCTAGAGCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288616.7
CDS-3UTR GCA 90 bp GTGAGGCAAGCTCTAGCTCCTCTTAGCCCCGCCTTTGGGAGCTTGGCAGTCCTGAGGTTCATGTTGATCTaGTGGGACAGTTCGATGAGC +
Preference number: 4 (lower is better)
Translates to: VRQALAPLSPAFGSLAVLRFMLI*WDSSMS
Trigger: GCTCATCGAACTGTCCCAGCAGATCAACATGAACCT...CAGGACTGCCAAGCTCCCAAAGGCGGGGCTAAGAGGAGCTAGAGCTTGCCTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288616.7
ENST00000316803.7
ENST00000351200.6
ENST00000453000.1
CDS-3UTR GCA 90 bp TACATCCTGGGCTCTCGGCGGCTACAGCGGGTGAGGCAAGCTCTAGCTCCTCTTAGGTTCATGTTGATCTaGTGGGACAGTTCGATGAGC +
Preference number: 4 (lower is better)
Translates to: YILGSRRLQRVRQALAPLRFMLI*WDSSMS
Trigger: GCTCATCGAACTGTCCCAGCAGATCAACATGAACCT...AAGAGGAGCTAGAGCTTGCCTCACCCGCTGTAGCCGCCGAGAGCCCAGGATGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288616.7
ENST00000316803.7
ENST00000351200.6
ENST00000453000.1
CDS-3UTR GCA 90 bp CGCCAGTACATCCTGGGCTCTCGGCGGCTACAGCGGGTGAGGCAAGCTCTAGCTTACACCAATCATATCTaGTGTCTCTGCCAGGAGTTT +
Preference number: 4 (lower is better)
Translates to: RQYILGSRRLQRVRQALAYTNHI*CLCQEF
Trigger: AAACTCCTGGCAGAGACAGCAGATATGATTGGTGTA...AGCTAGAGCTTGCCTCACCCGCTGTAGCCGCCGAGAGCCCAGGATGTACTGGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288616.7
ENST00000316803.7
ENST00000351200.6
ENST00000453000.1
CDS-3UTR CCA 90 bp AGGCAAGCTCTAGCTCCTCTTAGCCCCGCCTTTGGGAGCTTGGCAGTCCTGGAGTTCATGTTGATCTGCTaGGACAGTTCGATGAGCTCC +
Preference number: 4 (lower is better)
Translates to: RQALAPLSPAFGSLAVLEFMLIC*DSSMSS
Trigger: GGAGCTCATCGAACTGTCCCAGCAGATCAACATGAA...CTCCAGGACTGCCAAGCTCCCAAAGGCGGGGCTAAGAGGAGCTAGAGCTTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288616.7
ENST00000316803.7
ENST00000351200.6
ENST00000453000.1
CDS-3UTR CCA 90 bp GTGGCCTCCTCGTCGGCGGGCGCCCCCGCTTTCCAGTTGCAGGAGTTAGTCTTTTCATCAAAATCTACATaGCCACCCAGGTTCATGTTG +
Preference number: 4 (lower is better)
Translates to: VASSSAGAPAFQLQELVFSSKST*PPRFML
Trigger: CAACATGAACCTGGGTGGCCATGTAGATTTTGATGA...AAAGACTAACTCCTGCAACTGGAAAGCGGGGGCGCCCGCCGACGAGGAGGCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000316803.7
ENST00000453000.1
CDS-3UTR CCA 90 bp GTACATCCTGGGCTCTCGGCGGCTACAGCGGGTGAGGCAAGCTCTAGCTCCTCTTTTCCCCATCACCATTaGTGTCAAACTCTCGGAAAG +
Preference number: 4 (lower is better)
Translates to: VHPGLSAATAGEASSSSSFPHHH*CQTLGK
Trigger: CTTTCCGAGAGTTTGACACCAATGGTGATGGGGAAA...AGAGGAGCTAGAGCTTGCCTCACCCGCTGTAGCCGCCGAGAGCCCAGGATGTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288616.7
ENST00000316803.7
ENST00000351200.6
ENST00000453000.1
CDS-3UTR CCA 90 bp CGGGTGAGGCAAGCTCTAGCTCCTCTTAGCCCCGCCTTTGGGAGCTTGGCAGTCTTTCCCCATCACCATTaGTGTCAAACTCTCGGAAAG +
Preference number: 4 (lower is better)
Translates to: RVRQALAPLSPAFGSLAVFPHHH*CQTLGK
Trigger: CTTTCCGAGAGTTTGACACCAATGGTGATGGGGAAA...GACTGCCAAGCTCCCAAAGGCGGGGCTAAGAGGAGCTAGAGCTTGCCTCACCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288616.7
ENST00000316803.7
ENST00000351200.6
ENST00000453000.1
CDS-3UTR GCA 90 bp CAAGCTCTAGCTCCTCTTAGCCCCGCCTTTGGGAGCTTGGCAGTCCTGGAGGGGTACACCAATCATATCTaGTGTCTCTGCCAGGAGTTT +
Preference number: 4 (lower is better)
Translates to: QALAPLSPAFGSLAVLEGYTNHI*CLCQEF
Trigger: AAACTCCTGGCAGAGACAGCAGATATGATTGGTGTA...CCCCTCCAGGACTGCCAAGCTCCCAAAGGCGGGGCTAAGAGGAGCTAGAGCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288616.7
ENST00000316803.7
ENST00000351200.6
ENST00000453000.1
CDS-3UTR GCA 90 bp GTACATCCTGGGCTCTCGGCGGCTACAGCGGGTGAGGCAAGCTCTAGCTCCTCTTACACCAATCATATCTaGTGTCTCTGCCAGGAGTTT +
Preference number: 4 (lower is better)
Translates to: VHPGLSAATAGEASSSSSYTNHI*CLCQEF
Trigger: AAACTCCTGGCAGAGACAGCAGATATGATTGGTGTA...AGAGGAGCTAGAGCTTGCCTCACCCGCTGTAGCCGCCGAGAGCCCAGGATGTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288616.7
ENST00000316803.7
ENST00000351200.6
ENST00000453000.1
CDS-3UTR GCA 90 bp ATTGGTTCTGAGATAACAGGGCTGAGGCGAGCTGGGACGGGCGCAGAGCGAAGGCATCCTTTCCCAAAATaGTCCCAACCTCCCAATTCA +
Preference number: 4 (lower is better)
Translates to: IGSEITGLRRAGTGAERRHPFPK*SQPPNS
Trigger: TGAATTGGGAGGTTGGGAGCATTTTGGGAAAGGATG...CCTTCGCTCTGCGCCCGTCCCAGCTCGCCTCAGCCCTGTTATCTCAGAACCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453000.1
CDS-3UTR CCA 90 bp CGCCCCCGCTTTCCAGTTGCAGGAGTTAGTCTTTCACAGTGCGGAGGGGTGGGGTCATCAAAATCTACATaGCCACCCAGGTTCATGTTG +
Preference number: 4 (lower is better)
Translates to: RPRFPVAGVSLSQCGGVGSSKST*PPRFML
Trigger: CAACATGAACCTGGGTGGCCATGTAGATTTTGATGA...CCCCACCCCTCCGCACTGTGAAAGACTAACTCCTGCAACTGGAAAGCGGGGGCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000316803.7
ENST00000453000.1
CDS-3UTR TCA 90 bp AATATTTTTATTGGTTCTGAGATAACAGGGCTGAGGCGAGCTGGGACGGGCGCAAGAGTCTCCAATCCTTaGCGGAAATGGTGGTTCCGG +
Preference number: 4 (lower is better)
Translates to: NIFIGSEITGLRRAGTGARVSNP*RKWWFR
Trigger: CCGGAACCACCATTTCCGTCAAGGATTGGAGACTCT...TGCGCCCGTCCCAGCTCGCCTCAGCCCTGTTATCTCAGAACCAATAAAAATATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000453000.1
CDS CCA 90 bp CGCCCTCCTCTCGCGGCGCCGGCCGGCACAGGGGCCTCCGCGAACTaGGGTCCCCGGACGACTGCGGCGTCGCCGGGCAGGAGCCGGGTA +
Preference number: 5 (lower is better)
Translates to: RPPLAAPAGTGASAN*GPRTTAASPGRSRV
Trigger: TACCCGGCTCCTGCCCGGCGACGCCGCAGTCGTCCGGGGACCCCAGTTCGCGGAGGCCCCTGTGCCGGCCGGCGCCGCGAGAGGAGGGCG
80% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316803.7
CDS GCA 90 bp CCCGAGGACGCGCTGGAGGCGGGCGCCGTCCCCCGGCCGCTTAAATaGGGCCCCGTCGCCGCCGCCCATGTGACAGCGCAGCCTCTACGC +
Preference number: 5 (lower is better)
Translates to: PEDALEAGAVPRPLK*GPVAAAHVTAQPLR
Trigger: GCGTAGAGGCTGCGCTGTCACATGGGCGGCGGCGACGGGGCCGCATTTAAGCGGCCGGGGGACGGCGCCCGCCTCCAGCGCGTCCTCGGG
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316803.7
CDS GCA 90 bp GCCGCCGCCTTCAGCAGCGACGTCTTGGACTCGCTTTTGGCGATGTaGGAGCTCATCGCGGCGGGGCCCGCGCTCGCATGGCCCGGCGGG +
Preference number: 5 (lower is better)
Translates to: AAAFSSDVLDSLLAM*ELIAAGPALAWPGG
Trigger: CCCGCCGGGCCATGCGAGCGCGGGCCCCGCCGCGATGAGCTCGCACATCGCCAAAAGCGAGTCCAAGACGTCGCTGCTGAAGGCGGCGGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316803.7
CDS CCA 90 bp GATCTATCCTGGCCAAAGGCGGAGCTGAGCATGGGGCGCAGCCGGTaGAGGAACGGGTCCGCCTCGGACGCGGCGGCTGGAACGGAGTCC +
Preference number: 5 (lower is better)
Translates to: DLSWPKAELSMGRSR*RNGSASDAAAGTES
Trigger: GGACTCCGTTCCAGCCGCCGCGTCCGAGGCGGACCCGTTCCTCCACCGGCTGCGCCCCATGCTCAGCTCCGCCTTTGGCCAGGATAGATC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316803.7
CDS-3UTR CAA 90 bp ACCTCTGCCGGCTTGGCACGGTGGCCTCCTCGTCGGCGGGCGCCCCCGCTTTCCATGGTGCGCATGCAGTaGCCCAGATCCCGGCAGTTG +
Preference number: 5 (lower is better)
Translates to: TSAGLARWPPRRRAPPLSMVRMQ*PRSRQL
Trigger: CAACTGCCGGGATCTGGGCAACTGCATGCGCACCAT...GGAAAGCGGGGGCGCCCGCCGACGAGGAGGCCACCGTGCCAAGCCGGCAGAGGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316803.7
ENST00000453000.1
CDS-3UTR CAA 90 bp GGGCACATGGCCCTTGGCGCCTGGCATGACCTCTGCCGGCTTGGCACGGTGGCCCTCTTAGCCCCGCCTTaGGGAGCTTGGCAGTCCTGG +
Preference number: 5 (lower is better)
Translates to: GHMALGAWHDLCRLGTVALLAPP*GAWQSW
Trigger: CCAGGACTGCCAAGCTCCCAAAGGCGGGGCTAAGAG...GGCCACCGTGCCAAGCCGGCAGAGGTCATGCCAGGCGCCAAGGGCCATGTGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316803.7
ENST00000453000.1
CDS-3UTR CAA 90 bp GGGGTGCAGGCAGGCCCCATCCGCCAGTACATCCTGGGCTCTCGGCGGCTACAGATGACCTCTGCCGGCTaGGCACGGTGGCCTCCTCGT +
Preference number: 5 (lower is better)
Translates to: GVQAGPIRQYILGSRRLQMTSAG*ARWPPR
Trigger: ACGAGGAGGCCACCGTGCCAAGCCGGCAGAGGTCAT...CTGTAGCCGCCGAGAGCCCAGGATGTACTGGCGGATGGGGCCTGCCTGCACCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316803.7
ENST00000453000.1
CDS-3UTR CAA 90 bp CGCCAGTACATCCTGGGCTCTCGGCGGCTACAGCGGGTGAGGCAAGCTCTAGCTCCCGCCTTTGGGAGCTaGGCAGTCCTGGAGGGGCCC +
Preference number: 5 (lower is better)
Translates to: RQYILGSRRLQRVRQALAPAFGS*AVLEGP
Trigger: GGGCCCCTCCAGGACTGCCAAGCTCCCAAAGGCGGG...AGCTAGAGCTTGCCTCACCCGCTGTAGCCGCCGAGAGCCCAGGATGTACTGGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288616.7
ENST00000316803.7
ENST00000351200.6
ENST00000453000.1
CDS CCA 90 bp AAAATGCAGGCAGGGCCCAGCAGGTTGTGCATGACTGCGCAGTTCTaGGCCAGCATCAGGAGCGGTCCCGGGAGCTCGGCGTCAGCCGCC +
Preference number: 5 (lower is better)
Translates to: KMQAGPSRLCMTAQF*ASIRSGPGSSASAA
Trigger: GGCGGCTGACGCCGAGCTCCCGGGACCGCTCCTGATGCTGGCCCAGAACTGCGCAGTCATGCACAACCTGCTGGGCCCTGCCTGCATTTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288616.7
ENST00000453000.1
CDS-3UTR CAA 90 bp CAGCGGGTGAGGCAAGCTCTAGCTCCTCTTAGCCCCGCCTTTGGGAGCTTGGCACCCGCCTTTGGGAGCTaGGCAGTCCTGGAGGGGCCC +
Preference number: 5 (lower is better)
Translates to: QRVRQALAPLSPAFGSLAPAFGS*AVLEGP
Trigger: GGGCCCCTCCAGGACTGCCAAGCTCCCAAAGGCGGG...TGCCAAGCTCCCAAAGGCGGGGCTAAGAGGAGCTAGAGCTTGCCTCACCCGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288616.7
ENST00000316803.7
ENST00000351200.6
ENST00000453000.1
CDS-3UTR CAA 90 bp ATCCTGGGCTCTCGGCGGCTACAGCGGGTGAGGCAAGCTCTAGCTCCTCTTAGCCCCGCCTTTGGGAGCTaGGCAGTCCTGGAGGGGCCC +
Preference number: 5 (lower is better)
Translates to: ILGSRRLQRVRQALAPLSPAFGS*AVLEGP
Trigger: GGGCCCCTCCAGGACTGCCAAGCTCCCAAAGGCGGG...GCTAAGAGGAGCTAGAGCTTGCCTCACCCGCTGTAGCCGCCGAGAGCCCAGGAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288616.7
ENST00000316803.7
ENST00000351200.6
ENST00000453000.1
CDS-3UTR CAA 90 bp GGGCACATGGCCCTTGGCGCCTGGCATGACCTCTGCCGGCTTGGCACGGTGGCCCTGCCAGACCAGAGGTaGCACATGCAGGTGCCATTG +
Preference number: 5 (lower is better)
Translates to: GHMALGAWHDLCRLGTVALPDQR*HMQVPL
Trigger: CAATGGCACCTGCATGTGCAACCTCTGGTCTGGCAG...GGCCACCGTGCCAAGCCGGCAGAGGTCATGCCAGGCGCCAAGGGCCATGTGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453000.1
CDS-3UTR CAA 90 bp CGCAGAGCGAAGGTGGGAGGCTTTGCCCTGGGGCGGACATGCTGTGTGGGGTCTGCAGGGCCCAGCAGGTaGTGCATGACTGCGCAGTTC +
Preference number: 5 (lower is better)
Translates to: RRAKVGGFALGRTCCVGSAGPSR*CMTAQF
Trigger: GAACTGCGCAGTCATGCACAACCTGCTGGGCCCTGC...AGACCCCACACAGCATGTCCGCCCCAGGGCAAAGCCTCCCACCTTCGCTCTGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453000.1
CDS-3UTR CAA 90 bp GCTCTAGCTCCTCTTAGCCCCGCCTTTGGGAGCTTGGCAGTCCTGGAGGGGCCCCTCTTAGCCCCGCCTTaGGGAGCTTGGCAGTCCTGG +
Preference number: 5 (lower is better)
Translates to: ALAPLSPAFGSLAVLEGPLLAPP*GAWQSW
Trigger: CCAGGACTGCCAAGCTCCCAAAGGCGGGGCTAAGAG...GGGCCCCTCCAGGACTGCCAAGCTCCCAAAGGCGGGGCTAAGAGGAGCTAGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000288616.7
ENST00000316803.7
ENST00000351200.6
ENST00000453000.1
CDS-3UTR CAA 90 bp GTGGCCTCCTCGTCGGCGGGCGCCCCCGCTTTCCAGTTGCAGGAGTTAGTCTTTCGAAGGTGGGAGGCTTaGCCCTGGGGCGGACATGCT +
Preference number: 5 (lower is better)
Translates to: VASSSAGAPAFQLQELVFRRWEA*PWGGHA
Trigger: AGCATGTCCGCCCCAGGGCAAAGCCTCCCACCTTCG...AAAGACTAACTCCTGCAACTGGAAAGCGGGGGCGCCCGCCGACGAGGAGGCCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316803.7
ENST00000453000.1
CDS-3UTR CAA 90 bp CGCCAGTACATCCTGGGCTCTCGGCGGCTACAGCGGGTGAGGCAAGCTCTAGCTCTCTTAGCCCCGCCTTaGGGAGCTTGGCAGTCCTGG +
Preference number: 5 (lower is better)
Translates to: RQYILGSRRLQRVRQALALLAPP*GAWQSW
Trigger: CCAGGACTGCCAAGCTCCCAAAGGCGGGGCTAAGAG...AGCTAGAGCTTGCCTCACCCGCTGTAGCCGCCGAGAGCCCAGGATGTACTGGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288616.7
ENST00000316803.7
ENST00000351200.6
ENST00000453000.1
CDS-3UTR CAA 90 bp CAGCGGGTGAGGCAAGCTCTAGCTCCTCTTAGCCCCGCCTTTGGGAGCTTGGCAATGACCTCTGCCGGCTaGGCACGGTGGCCTCCTCGT +
Preference number: 5 (lower is better)
Translates to: QRVRQALAPLSPAFGSLAMTSAG*ARWPPR
Trigger: ACGAGGAGGCCACCGTGCCAAGCCGGCAGAGGTCAT...TGCCAAGCTCCCAAAGGCGGGGCTAAGAGGAGCTAGAGCTTGCCTCACCCGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316803.7
ENST00000453000.1
CDS-3UTR CAA 90 bp CAGCGGGTGAGGCAAGCTCTAGCTCCTCTTAGCCCCGCCTTTGGGAGCTTGGCACGAAGGTGGGAGGCTTaGCCCTGGGGCGGACATGCT +
Preference number: 5 (lower is better)
Translates to: QRVRQALAPLSPAFGSLARRWEA*PWGGHA
Trigger: AGCATGTCCGCCCCAGGGCAAAGCCTCCCACCTTCG...TGCCAAGCTCCCAAAGGCGGGGCTAAGAGGAGCTAGAGCTTGCCTCACCCGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316803.7
ENST00000453000.1
CDS TCA 90 bp AGACAACAGAAGAGGCGCAGGAGGGGAGGGAAGGCAGGGCCATCCTaGAGCGAGGGTAGGAGGACAGGGAGGAGTCAGGAGGAGACGTGG +
Preference number: 5 (lower is better)
Translates to: RQQKRRRRGGKAGPS*SEGRRTGRSQEETW
Trigger: CCACGTCTCCTCCTGACTCCTCCCTGTCCTCCTACCCTCGCTTCAGGATGGCCCTGCCTTCCCTCCCCTCCTGCGCCTCTTCTGTTGTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498082.1
CDS CCA 90 bp ACTCCAGCCAGATCCCCGCTGGAAGGCAGTGAGGGCAATCGGAGCTaGCAGCATGGAGACCAGGCTTGGCTGGTCTGCCAGACCAGAGGT +
Preference number: 5 (lower is better)
Translates to: TPARSPLEGSEGNRS*QHGDQAWLVCQTRG
Trigger: ACCTCTGGTCTGGCAGACCAGCCAAGCCTGGTCTCCATGCTGCCAGCTCCGATTGCCCTCACTGCCTTCCAGCGGGGATCTGGCTGGAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453000.1
CDS-3UTR CAA 90 bp CCGCCAGTACATCCTGGGCTCTCGGCGGCTACAGCGGGTGAGGCAAGCTCTAGCGTTGCCCATCCTAAGTaGAGGCAGCCCCTCTTGGGA +
Preference number: 5 (lower is better)
Translates to: PPVHPGLSAATAGEASSSVAHPK*RQPLLG
Trigger: TCCCAAGAGGGGCTGCCTCAACTTAGGATGGGCAAC...GCTAGAGCTTGCCTCACCCGCTGTAGCCGCCGAGAGCCCAGGATGTACTGGCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288616.7
ENST00000351200.6
CDS-3UTR CAA 90 bp CAGTACATCCTGGGCTCTCGGCGGCTACAGCGGGTGAGGCAAGCTCTAGCTCCTGCAGGGCCCAGCAGGTaGTGCATGACTGCGCAGTTC +
Preference number: 5 (lower is better)
Translates to: QYILGSRRLQRVRQALAPAGPSR*CMTAQF
Trigger: GAACTGCGCAGTCATGCACAACCTGCTGGGCCCTGC...AGGAGCTAGAGCTTGCCTCACCCGCTGTAGCCGCCGAGAGCCCAGGATGTACTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288616.7
ENST00000453000.1
CDS-3UTR CAA 90 bp GCCTCCTCGTCGGCGGGCGCCCCCGCTTTCCAGTTGCAGGAGTTAGTCTTTCACATGGTGCGCATGCAGTaGCCCAGATCCCGGCAGTTG +
Preference number: 5 (lower is better)
Translates to: ASSSAGAPAFQLQELVFHMVRMQ*PRSRQL
Trigger: CAACTGCCGGGATCTGGGCAACTGCATGCGCACCAT...GTGAAAGACTAACTCCTGCAACTGGAAAGCGGGGGCGCCCGCCGACGAGGAGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316803.7
ENST00000453000.1
CDS-3UTR CAA 90 bp CGCCAGTACATCCTGGGCTCTCGGCGGCTACAGCGGGTGAGGCAAGCTCTAGCTATGGTGCGCATGCAGTaGCCCAGATCCCGGCAGTTG +
Preference number: 5 (lower is better)
Translates to: RQYILGSRRLQRVRQALAMVRMQ*PRSRQL
Trigger: CAACTGCCGGGATCTGGGCAACTGCATGCGCACCAT...AGCTAGAGCTTGCCTCACCCGCTGTAGCCGCCGAGAGCCCAGGATGTACTGGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288616.7
ENST00000316803.7
ENST00000351200.6
ENST00000453000.1
CDS-3UTR CAA 90 bp GGGGTGCAGGCAGGCCCCATCCGCCAGTACATCCTGGGCTCTCGGCGGCTACAGACTCGTCCATCCCCATaGAGGTCCACATCTCGGATA +
Preference number: 5 (lower is better)
Translates to: GVQAGPIRQYILGSRRLQTRPSP*RSTSRI
Trigger: TATCCGAGATGTGGACCTCAATGGGGATGGACGAGT...CTGTAGCCGCCGAGAGCCCAGGATGTACTGGCGGATGGGGCCTGCCTGCACCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288616.7
ENST00000316803.7
ENST00000351200.6
ENST00000453000.1
CDS TCA 90 bp GGACAGGGAGGAGTCAGGAGGAGACGTGGCAACAGAATGGGGCTGTaGCTGCTTCGCGGGCACTGCCCCACCTTCTCCAATTTGACCCCC +
Preference number: 5 (lower is better)
Translates to: GQGGVRRRRGNRMGL*LLRGHCPTFSNLTP
Trigger: GGGGGTCAAATTGGAGAAGGTGGGGCAGTGCCCGCGAAGCAGTCACAGCCCCATTCTGTTGCCACGTCTCCTCCTGACTCCTCCCTGTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498082.1
CDS CCA 90 bp TCTGAAGGCCTCTCGGAGCTCTGGGGAAGTGAGCAAAGGTGGATGTaGTCAGGGGTAGGACCCGCAGAGCCTCTGTGGGCAAAGGCAGCC +
Preference number: 5 (lower is better)
Translates to: SEGLSELWGSEQRWM*SGVGPAEPLWAKAA
Trigger: GGCTGCCTTTGCCCACAGAGGCTCTGCGGGTCCTACCCCTGACCACATCCACCTTTGCTCACTTCCCCAGAGCTCCGAGAGGCCTTCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498082.1
CDS-3UTR CAA 90 bp GTACATCCTGGGCTCTCGGCGGCTACAGCGGGTGAGGCAAGCTCTAGCTCCTCTGGGAAGCTGGCTAGTTaGGGTTCCCGAAGCCAGGGT +
Preference number: 5 (lower is better)
Translates to: VHPGLSAATAGEASSSSSGKLAS*GSRSQG
Trigger: ACCCTGGCTTCGGGAACCCAAACTAGCCAGCTTCCC...AGAGGAGCTAGAGCTTGCCTCACCCGCTGTAGCCGCCGAGAGCCCAGGATGTAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288616.7
CDS-3UTR CAA 90 bp GTGAGGCAAGCTCTAGCTCCTCTTAGCCCCGCCTTTGGGAGCTTGGCAGTCCTGCTCTTAGCCCCGCCTTaGGGAGCTTGGCAGTCCTGG +
Preference number: 5 (lower is better)
Translates to: VRQALAPLSPAFGSLAVLLLAPP*GAWQSW
Trigger: CCAGGACTGCCAAGCTCCCAAAGGCGGGGCTAAGAG...CAGGACTGCCAAGCTCCCAAAGGCGGGGCTAAGAGGAGCTAGAGCTTGCCTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288616.7
ENST00000316803.7
ENST00000351200.6
ENST00000453000.1
CDS GCA 90 bp GGCAGCAGGCACTGGGTAGGAGGTGACGAGGATGCAGCACAGGTGTaGCTGGATCAGGTCCTTGAGGGGAGAAGAAAGCCCCACATCTCC +
Preference number: 5 (lower is better)
Translates to: GSRHWVGGDEDAAQV*LDQVLEGRRKPHIS
Trigger: GGAGATGTGGGGCTTTCTTCTCCCCTCAAGGACCTGATCCAGGCACACCTGTGCTGCATCCTCGTCACCTCCTACCCAGTGCCTGCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498082.1
CDS CCA 90 bp GCAGTGAGGGCAATCGGAGCTGGCAGCATGGAGACCAGGCTTGGCTaGTCTGCCAGACCAGAGGTTGCACATGCAGGTGCCATTGCTGAC +
Preference number: 5 (lower is better)
Translates to: AVRAIGAGSMETRLG*SARPEVAHAGAIAD
Trigger: GTCAGCAATGGCACCTGCATGTGCAACCTCTGGTCTGGCAGACCAGCCAAGCCTGGTCTCCATGCTGCCAGCTCCGATTGCCCTCACTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453000.1
CDS CCA 90 bp GAAGGCAGTGAGGGCAATCGGAGCTGGCAGCATGGAGACCAGGCTTaGCTGGTCTGCCAGACCAGAGGTTGCACATGCAGGTGCCATTGC +
Preference number: 5 (lower is better)
Translates to: EGSEGNRSWQHGDQA*LVCQTRGCTCRCHC
Trigger: GCAATGGCACCTGCATGTGCAACCTCTGGTCTGGCAGACCAGCCAAGCCTGGTCTCCATGCTGCCAGCTCCGATTGCCCTCACTGCCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453000.1
CDS CCA 90 bp TCCCAGCTCCCAAACAGACTTGTCCTACTCCAGCCAGATCCCCGCTaGAAGGCAGTGAGGGCAATCGGAGCTGGCAGCATGGAGACCAGG +
Preference number: 5 (lower is better)
Translates to: SQLPNRLVLLQPDPR*KAVRAIGAGSMETR
Trigger: CCTGGTCTCCATGCTGCCAGCTCCGATTGCCCTCACTGCCTTCCAGCGGGGATCTGGCTGGAGTAGGACAAGTCTGTTTGGGAGCTGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453000.1
CDS-3UTR CAA 90 bp CAAGCTCTAGCTCCTCTTAGCCCCGCCTTTGGGAGCTTGGCAGTCCTGGAGGGGGATGTGAGCCCTCTCTaGCGCGCGTGCTCTCTTACT +
Preference number: 5 (lower is better)
Translates to: QALAPLSPAFGSLAVLEGDVSPL*RACSLT
Trigger: AGTAAGAGAGCACGCGCGCAAGAGAGGGCTCACATC...CCCCTCCAGGACTGCCAAGCTCCCAAAGGCGGGGCTAAGAGGAGCTAGAGCTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000288616.7
CDS-3UTR CAA 90 bp AGGCAAGCTCTAGCTCCTCTTAGCCCCGCCTTTGGGAGCTTGGCAGTCCTGGAGATGGTGCGCATGCAGTaGCCCAGATCCCGGCAGTTG +
Preference number: 5 (lower is better)
Translates to: RQALAPLSPAFGSLAVLEMVRMQ*PRSRQL
Trigger: CAACTGCCGGGATCTGGGCAACTGCATGCGCACCAT...CTCCAGGACTGCCAAGCTCCCAAAGGCGGGGCTAAGAGGAGCTAGAGCTTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288616.7
ENST00000316803.7
ENST00000351200.6
ENST00000453000.1
CDS-3UTR CAA 90 bp TCTGAGATAACAGGGCTGAGGCGAGCTGGGACGGGCGCAGAGCGAAGGTGGGAGCCACCCAGGTTCATGTaGATCTGCTGGGACAGTTCG +
Preference number: 5 (lower is better)
Translates to: SEITGLRRAGTGAERRWEPPRFM*ICWDSS
Trigger: CGAACTGTCCCAGCAGATCAACATGAACCTGGGTGG...CTCCCACCTTCGCTCTGCGCCCGTCCCAGCTCGCCTCAGCCCTGTTATCTCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316803.7
ENST00000453000.1
CDS-3UTR CAA 90 bp TCTGAGATAACAGGGCTGAGGCGAGCTGGGACGGGCGCAGAGCGAAGGTGGGAGGCCCCCGCTTTCCAGTaGCAGGAGTTAGTCTTTCAC +
Preference number: 5 (lower is better)
Translates to: SEITGLRRAGTGAERRWEAPAFQ*QELVFH
Trigger: GTGAAAGACTAACTCCTGCAACTGGAAAGCGGGGGC...CTCCCACCTTCGCTCTGCGCCCGTCCCAGCTCGCCTCAGCCCTGTTATCTCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316803.7
ENST00000453000.1
CDS TCA 90 bp CAAACAGACTTGTCCTACTCCAGCCAGATCCCCGCTGGAAGGCAGTaGGGGCAATCGGAGCTGGCAGCATGGAGACCAGGCTTGGCTGGT +
Preference number: 5 (lower is better)
Translates to: QTDLSYSSQIPAGRQ*GQSELAAWRPGLAG
Trigger: ACCAGCCAAGCCTGGTCTCCATGCTGCCAGCTCCGATTGCCCTCACTGCCTTCCAGCGGGGATCTGGCTGGAGTAGGACAAGTCTGTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453000.1
CDS-3UTR CAA 90 bp GTGAGGCAAGCTCTAGCTCCTCTTAGCCCCGCCTTTGGGAGCTTGGCAGTCCTGGTTGCCCATCCTAAGTaGAGGCAGCCCCTCTTGGGA +
Preference number: 5 (lower is better)
Translates to: VRQALAPLSPAFGSLAVLVAHPK*RQPLLG
Trigger: TCCCAAGAGGGGCTGCCTCAACTTAGGATGGGCAAC...CAGGACTGCCAAGCTCCCAAAGGCGGGGCTAAGAGGAGCTAGAGCTTGCCTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288616.7
ENST00000351200.6
CDS-3UTR CAA 90 bp GGTGCAGGCAGGCCCCATCCGCCAGTACATCCTGGGCTCTCGGCGGCTACAGCGTTTCTCAGTGGATACTaGACACAGTTGCCCATCCTA +
Preference number: 5 (lower is better)
Translates to: GAGRPHPPVHPGLSAATAFLSGY*TQLPIL
Trigger: TAGGATGGGCAACTGTGTCAAGTATCCACTGAGAAA...CGCTGTAGCCGCCGAGAGCCCAGGATGTACTGGCGGATGGGGCCTGCCTGCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288616.7
ENST00000351200.6
CDS-3UTR CAA 90 bp AGGCCCCATCCGCCAGTACATCCTGGGCTCTCGGCGGCTACAGCGGGTGAGGCACCTGGCACATCTTCCTaGAGAGATTTCTCAGTGGAT +
Preference number: 5 (lower is better)
Translates to: RPHPPVHPGLSAATAGEAPGTSS*RDFSVD
Trigger: ATCCACTGAGAAATCTCTCAAGGAAGATGTGCCAGG...TGCCTCACCCGCTGTAGCCGCCGAGAGCCCAGGATGTACTGGCGGATGGGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288616.7
CDS-3UTR CAA 90 bp ATCCTGGGCTCTCGGCGGCTACAGCGGGTGAGGCAAGCTCTAGCTCCTCTTAGCCCACCCAGGTTCATGTaGATCTGCTGGGACAGTTCG +
Preference number: 5 (lower is better)
Translates to: ILGSRRLQRVRQALAPLSPPRFM*ICWDSS
Trigger: CGAACTGTCCCAGCAGATCAACATGAACCTGGGTGG...GCTAAGAGGAGCTAGAGCTTGCCTCACCCGCTGTAGCCGCCGAGAGCCCAGGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288616.7
ENST00000316803.7
ENST00000351200.6
ENST00000453000.1
CDS-3UTR CAA 90 bp GAGGCTTTGCCCTGGGGCGGACATGCTGTGTGGGGTCTGCTGGCGGGCTCCCTGATTTCCCCATCACCATaGGTGTCAAACTCTCGGAAA +
Preference number: 5 (lower is better)
Translates to: EALPWGGHAVWGLLAGSLISPSP*VSNSRK
Trigger: TTTCCGAGAGTTTGACACCAATGGTGATGGGGAAAT...CAGGGAGCCCGCCAGCAGACCCCACACAGCATGTCCGCCCCAGGGCAAAGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000316803.7
ENST00000453000.1
CDS-3UTR CAA 90 bp CATCCGCCAGTACATCCTGGGCTCTCGGCGGCTACAGCGGGTGAGGCAAGCTCTACTCGTCCATCCCCATaGAGGTCCACATCTCGGATA +
Preference number: 5 (lower is better)
Translates to: HPPVHPGLSAATAGEASSTRPSP*RSTSRI
Trigger: TATCCGAGATGTGGACCTCAATGGGGATGGACGAGT...AGAGCTTGCCTCACCCGCTGTAGCCGCCGAGAGCCCAGGATGTACTGGCGGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288616.7
ENST00000316803.7
ENST00000351200.6
ENST00000453000.1
CDS-3UTR CAA 90 bp GTGGCCTCCTCGTCGGCGGGCGCCCCCGCTTTCCAGTTGCAGGAGTTAGTCTTTACTCGTCCATCCCCATaGAGGTCCACATCTCGGATA +
Preference number: 5 (lower is better)
Translates to: VASSSAGAPAFQLQELVFTRPSP*RSTSRI
Trigger: TATCCGAGATGTGGACCTCAATGGGGATGGACGAGT...AAAGACTAACTCCTGCAACTGGAAAGCGGGGGCGCCCGCCGACGAGGAGGCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316803.7
ENST00000453000.1
CDS-3UTR CAA 90 bp CGCCCCCGCTTTCCAGTTGCAGGAGTTAGTCTTTCACAGTGCGGAGGGGTGGGGGTCTTGGACTCGCTTTaGGCGATGTGCGAGCTCATC +
Preference number: 5 (lower is better)
Translates to: RPRFPVAGVSLSQCGGVGVLDSL*AMCELI
Trigger: GATGAGCTCGCACATCGCCAAAAGCGAGTCCAAGAC...CCCCACCCCTCCGCACTGTGAAAGACTAACTCCTGCAACTGGAAAGCGGGGGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000316803.7
CDS-3UTR CAA 90 bp TCGTCGGCGGGCGCCCCCGCTTTCCAGTTGCAGGAGTTAGTCTTTCACAGTGCGTTCAGCAGCGACGTCTaGGACTCGCTTTTGGCGATG +
Preference number: 5 (lower is better)
Translates to: SSAGAPAFQLQELVFHSAFSSDV*DSLLAM
Trigger: CATCGCCAAAAGCGAGTCCAAGACGTCGCTGCTGAA...CGCACTGTGAAAGACTAACTCCTGCAACTGGAAAGCGGGGGCGCCCGCCGACGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316803.7
CDS-3UTR CAA 90 bp GATAACAGGGCTGAGGCGAGCTGGGACGGGCGCAGAGCGAAGGTGGGAGGCTTTAGCTCCCAAACAGACTaGTCCTACTCCAGCCAGATC +
Preference number: 5 (lower is better)
Translates to: DNRAEASWDGRRAKVGGFSSQTD*SYSSQI
Trigger: GATCTGGCTGGAGTAGGACAAGTCTGTTTGGGAGCT...AAAGCCTCCCACCTTCGCTCTGCGCCCGTCCCAGCTCGCCTCAGCCCTGTTATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453000.1
CDS-3UTR CAA 90 bp GTGGCCTCCTCGTCGGCGGGCGCCCCCGCTTTCCAGTTGCAGGAGTTAGTCTTTCAGAGTCTCCAATCCTaGACGGAAATGGTGGTTCCG +
Preference number: 5 (lower is better)
Translates to: VASSSAGAPAFQLQELVFQSLQS*TEMVVP
Trigger: CGGAACCACCATTTCCGTCAAGGATTGGAGACTCTG...AAAGACTAACTCCTGCAACTGGAAAGCGGGGGCGCCCGCCGACGAGGAGGCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000453000.1
CDS GCA 90 bp CACATCTCCCTTAGACATAGAAGCTCCTGGGCCCCTAACAGGAGATaGCCAAGAAGCCACCAGCCCCACCAGCCTGGGCACAGAACCTCT +
Preference number: 5 (lower is better)
Translates to: HISLRHRSSWAPNRR*PRSHQPHQPGHRTS
Trigger: AGAGGTTCTGTGCCCAGGCTGGTGGGGCTGGTGGCTTCTTGGGCATCTCCTGTTAGGGGCCCAGGAGCTTCTATGTCTAAGGGAGATGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498082.1
CDS CCA 90 bp CGTCAGCCGCCAGCCCCTCCTCGCTCGTCTGCACCACCATGTAGCTaGTCTGTTCCTCCTGGCACATCTTCCTTGAGAGATTTCTCAGTG +
Preference number: 5 (lower is better)
Translates to: RQPPAPPRSSAPPCS*SVPPGTSSLRDFSV
Trigger: CACTGAGAAATCTCTCAAGGAAGATGTGCCAGGAGGAACAGACCAGCTACATGGTGGTGCAGACGAGCGAGGAGGGGCTGGCGGCTGACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288616.7
CDS CCA 90 bp GAATTCTCTGAAGGCCTCTCGGAGCTCTGGGGAAGTGAGCAAAGGTaGATGTGGTCAGGGGTAGGACCCGCAGAGCCTCTGTGGGCAAAG +
Preference number: 5 (lower is better)
Translates to: EFSEGLSELWGSEQR*MWSGVGPAEPLWAK
Trigger: CTTTGCCCACAGAGGCTCTGCGGGTCCTACCCCTGACCACATCCACCTTTGCTCACTTCCCCAGAGCTCCGAGAGGCCTTCAGAGAATTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498082.1
CDS-3UTR CAA 90 bp AGGCAAGCTCTAGCTCCTCTTAGCCCCGCCTTTGGGAGCTTGGCAGTCCTGGAGCCACCCAGGTTCATGTaGATCTGCTGGGACAGTTCG +
Preference number: 5 (lower is better)
Translates to: RQALAPLSPAFGSLAVLEPPRFM*ICWDSS
Trigger: CGAACTGTCCCAGCAGATCAACATGAACCTGGGTGG...CTCCAGGACTGCCAAGCTCCCAAAGGCGGGGCTAAGAGGAGCTAGAGCTTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288616.7
ENST00000316803.7
ENST00000351200.6
ENST00000453000.1
CDS-3UTR CAA 90 bp CAGTACATCCTGGGCTCTCGGCGGCTACAGCGGGTGAGGCAAGCTCTAGCTCCTACTCGTCCATCCCCATaGAGGTCCACATCTCGGATA +
Preference number: 5 (lower is better)
Translates to: QYILGSRRLQRVRQALAPTRPSP*RSTSRI
Trigger: TATCCGAGATGTGGACCTCAATGGGGATGGACGAGT...AGGAGCTAGAGCTTGCCTCACCCGCTGTAGCCGCCGAGAGCCCAGGATGTACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288616.7
ENST00000316803.7
ENST00000351200.6
ENST00000453000.1
CDS-3UTR CAA 90 bp AGGCAAGCTCTAGCTCCTCTTAGCCCCGCCTTTGGGAGCTTGGCAGTCCTGGAGGCCCCCGCTTTCCAGTaGCAGGAGTTAGTCTTTCAC +
Preference number: 5 (lower is better)
Translates to: RQALAPLSPAFGSLAVLEAPAFQ*QELVFH
Trigger: GTGAAAGACTAACTCCTGCAACTGGAAAGCGGGGGC...CTCCAGGACTGCCAAGCTCCCAAAGGCGGGGCTAAGAGGAGCTAGAGCTTGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316803.7
ENST00000453000.1
CDS-3UTR CAA 90 bp GGTGCAGGCAGGCCCCATCCGCCAGTACATCCTGGGCTCTCGGCGGCTACAGCGGTGATCTATCCTTCCTaGAGAGATTTCTCAGTGGAT +
Preference number: 5 (lower is better)
Translates to: GAGRPHPPVHPGLSAATAVIYPS*RDFSVD
Trigger: ATCCACTGAGAAATCTCTCAAGGAAGGATAGATCAC...CGCTGTAGCCGCCGAGAGCCCAGGATGTACTGGCGGATGGGGCCTGCCTGCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000351200.6
CDS-3UTR CAA 90 bp CGGCGGCTACAGCGGGTGAGGCAAGCTCTAGCTCCTCTTAGCCCCGCCTTTGGGTGCACAGGCATCAAATaGGTCCAACAGACAGAGTCT +
Preference number: 5 (lower is better)
Translates to: RRLQRVRQALAPLSPAFGCTGIK*VQQTES
Trigger: AGACTCTGTCTGTTGGACCAATTTGATGCCTGTGCA...CCCAAAGGCGGGGCTAAGAGGAGCTAGAGCTTGCCTCACCCGCTGTAGCCGCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453000.1
CDS TCA 90 bp GCAAGAGGGGACCCTGAGAGTCAAGGAGCGGGGTTCAGAGAGCCCTaGGCGTGCACAGGCATCAAATTGGTCCAACAGACAGAGTCTCCA +
Preference number: 5 (lower is better)
Translates to: ARGDPESQGAGFREP*ACTGIKLVQQTESP
Trigger: TGGAGACTCTGTCTGTTGGACCAATTTGATGCCTGTGCACGCTCAGGGCTCTCTGAACCCCGCTCCTTGACTCTCAGGGTCCCCTCTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453000.1
CDS-3UTR CAA 90 bp CGCAGAGCGAAGGTGGGAGGCTTTGCCCTGGGGCGGACATGCTGTGTGGGGTCTATTTCCCCATCACCATaGGTGTCAAACTCTCGGAAA +
Preference number: 5 (lower is better)
Translates to: RRAKVGGFALGRTCCVGSISPSP*VSNSRK
Trigger: TTTCCGAGAGTTTGACACCAATGGTGATGGGGAAAT...AGACCCCACACAGCATGTCCGCCCCAGGGCAAAGCCTCCCACCTTCGCTCTGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000316803.7
ENST00000453000.1
CDS-3UTR CAA 90 bp CCCATCCGCCAGTACATCCTGGGCTCTCGGCGGCTACAGCGGGTGAGGCAAGCTATTTCCCCATCACCATaGGTGTCAAACTCTCGGAAA +
Preference number: 5 (lower is better)
Translates to: PIRQYILGSRRLQRVRQAISPSP*VSNSRK
Trigger: TTTCCGAGAGTTTGACACCAATGGTGATGGGGAAAT...AGCTTGCCTCACCCGCTGTAGCCGCCGAGAGCCCAGGATGTACTGGCGGATGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288616.7
ENST00000316803.7
ENST00000351200.6
ENST00000453000.1
CDS GCA 90 bp TTGGCAGCAGCAGATCCCAAAGTTGAGCTCCTTCTCCAGTGTCATTaGCCCCCTTTACCAGAGACCTTTCTCTGTCCAAGCTCCCTCCCC +
Preference number: 5 (lower is better)
Translates to: LAAADPKVELLLQCH*PPLPETFLCPSSLP
Trigger: GGGGAGGGAGCTTGGACAGAGAAAGGTCTCTGGTAAAGGGGGGCAATGACACTGGAGAAGGAGCTCAACTTTGGGATCTGCTGCTGCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000498082.1
CDS CCA 90 bp ACAGGGAAAGTCACCTGGAGAGCTGATGGCAGAGGGGAACCAAGCTaGAGAAGGCTGCCGGATCATCTACATCAGATTAGCGCTCAGTCC +
Preference number: 5 (lower is better)
Translates to: TGKVTWRADGRGEPS*RRLPDHLHQISAQS
Trigger: GGACTGAGCGCTAATCTGATGTAGATGATCCGGCAGCCTTCTCCAGCTTGGTTCCCCTCTGCCATCAGCTCTCCAGGTGACTTTCCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288616.7
CDS CCA 90 bp CTAGAGAAGGCAGGAAGGAAGGAGAGGTCGCCCCAGCATGGCGATTaGCAGCAGCAGATCCCAAAGTTGAGCTCCTTCTCCAGTGTCATT +
Preference number: 5 (lower is better)
Translates to: LEKAGRKERSPQHGD*QQQIPKLSSFSSVI
Trigger: AATGACACTGGAGAAGGAGCTCAACTTTGGGATCTGCTGCTGCCAATCGCCATGCTGGGGCGACCTCTCCTTCCTTCCTGCCTTCTCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498082.1
CDS CCA 90 bp TGTCAAACTAGAGAAGGCAGGAAGGAAGGAGAGGTCGCCCCAGCATaGCGATTGGCAGCAGCAGATCCCAAAGTTGAGCTCCTTCTCCAG +
Preference number: 5 (lower is better)
Translates to: CQTREGRKEGEVAPA*RLAAADPKVELLLQ
Trigger: CTGGAGAAGGAGCTCAACTTTGGGATCTGCTGCTGCCAATCGCCATGCTGGGGCGACCTCTCCTTCCTTCCTGCCTTCTCTAGTTTGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498082.1
CDS TCA 90 bp CAGAGTCCAGGGAGGTCACAACAGGGAAAAGAGAGCACCACCCAATaGAACAGGAAGAGCAGGGCGACAGAGGCTGCAAGACAACAGAAG +
Preference number: 5 (lower is better)
Translates to: QSPGRSQQGKESTTQ*NRKSRATEAARQQK
Trigger: CTTCTGTTGTCTTGCAGCCTCTGTCGCCCTGCTCTTCCTGTTTCATTGGGTGGTGCTCTCTTTTCCCTGTTGTGACCTCCCTGGACTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498082.1
CDS GCA 90 bp ACACACACACACACACACACGCACGCACGCACTGGCACATACATATaGACAGAATCACACACCCAAGTGCATGAAGAGACAGGGGCAGCG +
Preference number: 5 (lower is better)
Translates to: THTHTHTHARTGTYI*TESHTQVHEETGAA
Trigger: CGCTGCCCCTGTCTCTTCATGCACTTGGGTGTGTGATTCTGTGCATATGTATGTGCCAGTGCGTGCGTGCGTGTGTGTGTGTGTGTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453000.1
CDS CCA 90 bp TCCAAAAAGCACATGTCTCCAGCCTCAAGCAGTGCCCAGGTCTCCTaGGCAATCAAGGCAACCCTGAATCTAGGCGTCAGAACAGATGGC +
Preference number: 5 (lower is better)
Translates to: SKKHMSPASSSAQVS*AIKATLNLGVRTDG
Trigger: GCCATCTGTTCTGACGCCTAGATTCAGGGTTGCCTTGATTGCCCAGGAGACCTGGGCACTGCTTGAGGCTGGAGACATGTGCTTTTTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000498082.1
CDS-3UTR CAA 90 bp TACATCCTGGGCTCTCGGCGGCTACAGCGGGTGAGGCAAGCTCTAGCTCCTCTTATTTCCCCATCACCATaGGTGTCAAACTCTCGGAAA +
Preference number: 5 (lower is better)
Translates to: YILGSRRLQRVRQALAPLISPSP*VSNSRK
Trigger: TTTCCGAGAGTTTGACACCAATGGTGATGGGGAAAT...AAGAGGAGCTAGAGCTTGCCTCACCCGCTGTAGCCGCCGAGAGCCCAGGATGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288616.7
ENST00000316803.7
ENST00000351200.6
ENST00000453000.1
CDS GCA 90 bp GGTTGCATGATGGATACACAATTGGAGGGCTCCATGGATGGCCACTaGTGGCTTGCTTCTCTCCCACTTTCAAGCCCCACCTACCTTCAA +
Preference number: 5 (lower is better)
Translates to: GCMMDTQLEGSMDGH*WLASLPLSSPTYLQ
Trigger: TTGAAGGTAGGTGGGGCTTGAAAGTGGGAGAGAAGCAAGCCAGCAGTGGCCATCCATGGAGCCCTCCAATTGTGTATCCATCATGCAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498082.1
CDS CCA 90 bp AAGGAGCGGGGTTCAGAGAGCCCTGAGCGTGCACAGGCATCAAATTaGTCCAACAGACAGAGTCTCCAATCCTTGACGGAAATGGTGGTT +
Preference number: 5 (lower is better)
Translates to: KERGSESPERAQASN*SNRQSLQSLTEMVV
Trigger: AACCACCATTTCCGTCAAGGATTGGAGACTCTGTCTGTTGGACCAATTTGATGCCTGTGCACGCTCAGGGCTCTCTGAACCCCGCTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453000.1
CDS GCA 90 bp AGGATGAAAGGGCTGGGGGTTGGAAAATTAGGGCGGATTGATGGTTaGATGATGGATACACAATTGGAGGGCTCCATGGATGGCCACTGC +
Preference number: 5 (lower is better)
Translates to: RMKGLGVGKLGRIDG*MMDTQLEGSMDGHC
Trigger: GCAGTGGCCATCCATGGAGCCCTCCAATTGTGTATCCATCATGCAACCATCAATCCGCCCTAATTTTCCAACCCCCAGCCCTTTCATCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000498082.1
CDS CCA 90 bp CAAGTATTTTGGTGGAGTGTGAATGAAGGACTGTTGAGTTGTGGCTaGGGAGGTGAGCTGTGGTCAGATCTTAGGGAGCCTGAGTGTCCA +
Preference number: 5 (lower is better)
Translates to: QVFWWSVNEGLLSCG*GGELWSDLREPECP
Trigger: TGGACACTCAGGCTCCCTAAGATCTGACCACAGCTCACCTCCCCAGCCACAACTCAACAGTCCTTCATTCACACTCCACCAAAATACTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498082.1
CDS CCA 90 bp AGTGTGAATGAAGGACTGTTGAGTTGTGGCTGGGGAGGTGAGCTGTaGTCAGATCTTAGGGAGCCTGAGTGTCCAGTTGAGGAATGTAAT +
Preference number: 5 (lower is better)
Translates to: SVNEGLLSCGWGGEL*SDLREPECPVEECN
Trigger: ATTACATTCCTCAACTGGACACTCAGGCTCCCTAAGATCTGACCACAGCTCACCTCCCCAGCCACAACTCAACAGTCCTTCATTCACACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498082.1
CDS GCA 90 bp AGAATGAATAGATGCACGAATGGACAGATAAATGCATGGATAAATTaGTATAGGAATGATTGCTTAGAGATGGAGGAATGGATAAATAGG +
Preference number: 5 (lower is better)
Translates to: RMNRCTNGQINAWIN*YRNDCLEMEEWINR
Trigger: CCTATTTATCCATTCCTCCATCTCTAAGCAATCATTCCTATAGCAATTTATCCATGCATTTATCTGTCCATTCGTGCATCTATTCATTCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498082.1
CDS CCA 72 bp GGAGCCCGGAGCTCCCGGCGGCTGGCGGTGCAGATCTaGGGGCGCTGCCGGCTGTCCCCGGAGAGCCCACCC +
Preference number: 6 (lower is better)
Translates to: GARSSRRLAVQI*GRCRLSPESPP
Trigger: GGGTGGGCTCTCCGGGGACAGCCGGCAGCGCCCCCAGATCTGCACCGCCAGCCGCCGGGAGCTCCGGGCTCC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316803.7
CDS CCA 72 bp CGGGGCTCCCGGCGGGAGCCAAGCCCGAGGACGCGCTaGAGGCGGGCGCCGTCCCCCGGCCGCTTAAATGCG +
Preference number: 6 (lower is better)
Translates to: RGSRREPSPRTR*RRAPSPGRLNA
Trigger: CGCATTTAAGCGGCCGGGGGACGGCGCCCGCCTCCAGCGCGTCCTCGGGCTTGGCTCCCGCCGGGAGCCCCG
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316803.7
CDS GCA 72 bp GCGCTGGAGGCGGGCGCCGTCCCCCGGCCGCTTAAATaGGGCCCCGTCGCCGCCGCCCATGTGACAGCGCAG +
Preference number: 6 (lower is better)
Translates to: ALEAGAVPRPLK*GPVAAAHVTAQ
Trigger: CTGCGCTGTCACATGGGCGGCGGCGACGGGGCCGCATTTAAGCGGCCGGGGGACGGCGCCCGCCTCCAGCGC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316803.7
CDS CCA 72 bp CAGCCTCTACGCCCGGAGCCCGGAGCTCCCGGCGGCTaGCGGTGCAGATCTGGGGGCGCTGCCGGCTGTCCC +
Preference number: 6 (lower is better)
Translates to: QPLRPEPGAPGG*RCRSGGAAGCP
Trigger: GGGACAGCCGGCAGCGCCCCCAGATCTGCACCGCCAGCCGCCGGGAGCTCCGGGCTCCGGGCGTAGAGGCTG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316803.7
CDS CCA 72 bp CCGGTGGAGGAACGGGTCCGCCTCGGACGCGGCGGCTaGAACGGAGTCCCCGCGGCCCCGGGCTCGCAGAGA +
Preference number: 6 (lower is better)
Translates to: PVEERVRLGRGG*NGVPAAPGSQR
Trigger: TCTCTGCGAGCCCGGGGCCGCGGGGACTCCGTTCCAGCCGCCGCGTCCGAGGCGGACCCGTTCCTCCACCGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316803.7
CDS CCA 72 bp TGGCCAAAGGCGGAGCTGAGCATGGGGCGCAGCCGGTaGAGGAACGGGTCCGCCTCGGACGCGGCGGCTGGA +
Preference number: 6 (lower is better)
Translates to: WPKAELSMGRSR*RNGSASDAAAG
Trigger: TCCAGCCGCCGCGTCCGAGGCGGACCCGTTCCTCCACCGGCTGCGCCCCATGCTCAGCTCCGCCTTTGGCCA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316803.7
CDS CAA 72 bp GCCGCCGCCTTCAGCAGCGACGTCTTGGACTCGCTTTaGGCGATGTGCGAGCTCATCGCGGCGGGGCCCGCG +
Preference number: 6 (lower is better)
Translates to: AAAFSSDVLDSL*AMCELIAAGPA
Trigger: CGCGGGCCCCGCCGCGATGAGCTCGCACATCGCCAAAAGCGAGTCCAAGACGTCGCTGCTGAAGGCGGCGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316803.7
CDS CCA 72 bp CTCCTCTTAGCCCCGCCTTTGGGAGCTTGGCAGTCCTaGAGGGGCCCTCGCGGCCTCAGCGGGACATCATCC +
Preference number: 6 (lower is better)
Translates to: LLLAPPLGAWQS*RGPRGLSGTSS
Trigger: GGATGATGTCCCGCTGAGGCCGCGAGGGCCCCTCCAGGACTGCCAAGCTCCCAAAGGCGGGGCTAAGAGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288616.7
ENST00000316803.7
ENST00000351200.6
ENST00000453000.1
CDS CAA 90 bp CGGGTGAGGCAAGCTCTAGCTCCTCTTAGCCCCGCCTTTGGGAGCTaGGCAGTCCTGGAGGGGCCCTCGCGGCCTCAGCGGGACATCATC +
Preference number: 6 (lower is better)
Translates to: RVRQALAPLSPAFGS*AVLEGPSRPQRDII
Trigger: GATGATGTCCCGCTGAGGCCGCGAGGGCCCCTCCAGGACTGCCAAGCTCCCAAAGGCGGGGCTAAGAGGAGCTAGAGCTTGCCTCACCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288616.7
ENST00000316803.7
ENST00000351200.6
ENST00000453000.1
CDS TCA 72 bp CTGGTCGCAGTGATCTATCCTGGCCAAAGGCGGAGCTaGGCATGGGGCGCAGCCGGTGGAGGAACGGGTCCG +
Preference number: 6 (lower is better)
Translates to: LVAVIYPGQRRS*AWGAAGGGTGP
Trigger: CGGACCCGTTCCTCCACCGGCTGCGCCCCATGCTCAGCTCCGCCTTTGGCCAGGATAGATCACTGCGACCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316803.7
CDS GCA 72 bp TTCAGCAGCGACGTCTTGGACTCGCTTTTGGCGATGTaGGAGCTCATCGCGGCGGGGCCCGCGCTCGCATGG +
Preference number: 6 (lower is better)
Translates to: FSSDVLDSLLAM*ELIAAGPALAW
Trigger: CCATGCGAGCGCGGGCCCCGCCGCGATGAGCTCGCACATCGCCAAAAGCGAGTCCAAGACGTCGCTGCTGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316803.7
CDS CCA 72 bp AGATCCCCGCTGGAAGGCAGTGAGGGCAATCGGAGCTaGCAGCATGGAGACCAGGCTTGGCTGGTCTGCCAG +
Preference number: 6 (lower is better)
Translates to: RSPLEGSEGNRS*QHGDQAWLVCQ
Trigger: CTGGCAGACCAGCCAAGCCTGGTCTCCATGCTGCCAGCTCCGATTGCCCTCACTGCCTTCCAGCGGGGATCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453000.1
CDS CCA 72 bp GACAGGGAGGAGTCAGGAGGAGACGTGGCAACAGAATaGGGCTGTGACTGCTTCGCGGGCACTGCCCCACCT +
Preference number: 6 (lower is better)
Translates to: DREESGGDVATE*GCDCFAGTAPP
Trigger: AGGTGGGGCAGTGCCCGCGAAGCAGTCACAGCCCCATTCTGTTGCCACGTCTCCTCCTGACTCCTCCCTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498082.1
CDS CAA 90 bp CTCCGTCTGTGCCGTTCTTCCTCCAGGACGGATGTGAGCCCTCTCTaGCGCGCGTGCTCTCTTACTCGTCTGCCTGCTCCTGCTCTCCGA +
Preference number: 6 (lower is better)
Translates to: LRLCRSSSRTDVSPL*RACSLTRLPAPALR
Trigger: TCGGAGAGCAGGAGCAGGCAGACGAGTAAGAGAGCACGCGCGCAAGAGAGGGCTCACATCCGTCCTGGAGGAAGAACGGCACAGACGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288616.7
CDS TCA 72 bp CCCTCCGTCTGTGCCGTTCTTCCTCCAGGACGGATGTaGGCCCTCTCTTGCGCGCGTGCTCTCTTACTCGTC +
Preference number: 6 (lower is better)
Translates to: PSVCAVLPPGRM*ALSCARALLLV
Trigger: GACGAGTAAGAGAGCACGCGCGCAAGAGAGGGCTCACATCCGTCCTGGAGGAAGAACGGCACAGACGGAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288616.7
CDS TCA 72 bp TTGTCCTACTCCAGCCAGATCCCCGCTGGAAGGCAGTaGGGGCAATCGGAGCTGGCAGCATGGAGACCAGGC +
Preference number: 6 (lower is better)
Translates to: LSYSSQIPAGRQ*GQSELAAWRPG
Trigger: GCCTGGTCTCCATGCTGCCAGCTCCGATTGCCCTCACTGCCTTCCAGCGGGGATCTGGCTGGAGTAGGACAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453000.1
CDS GCA 72 bp TCCTCCAGGACGGATGTGAGCCCTCTCTTGCGCGCGTaGTCTCTTACTCGTCTGCCTGCTCCTGCTCTCCGA +
Preference number: 6 (lower is better)
Translates to: SSRTDVSPLLRA*SLTRLPAPALR
Trigger: TCGGAGAGCAGGAGCAGGCAGACGAGTAAGAGAGCACGCGCGCAAGAGAGGGCTCACATCCGTCCTGGAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288616.7
CDS CCA 72 bp GAGGGCAATCGGAGCTGGCAGCATGGAGACCAGGCTTaGCTGGTCTGCCAGACCAGAGGTTGCACATGCAGG +
Preference number: 6 (lower is better)
Translates to: EGNRSWQHGDQA*LVCQTRGCTCR
Trigger: CCTGCATGTGCAACCTCTGGTCTGGCAGACCAGCCAAGCCTGGTCTCCATGCTGCCAGCTCCGATTGCCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453000.1
CDS CCA 72 bp CTCTCGGAGCTCTGGGGAAGTGAGCAAAGGTGGATGTaGTCAGGGGTAGGACCCGCAGAGCCTCTGTGGGCA +
Preference number: 6 (lower is better)
Translates to: LSELWGSEQRWM*SGVGPAEPLWA
Trigger: TGCCCACAGAGGCTCTGCGGGTCCTACCCCTGACCACATCCACCTTTGCTCACTTCCCCAGAGCTCCGAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498082.1
CDS CCA 72 bp GAAGGCCTCTCGGAGCTCTGGGGAAGTGAGCAAAGGTaGATGTGGTCAGGGGTAGGACCCGCAGAGCCTCTG +
Preference number: 6 (lower is better)
Translates to: EGLSELWGSEQR*MWSGVGPAEPL
Trigger: CAGAGGCTCTGCGGGTCCTACCCCTGACCACATCCACCTTTGCTCACTTCCCCAGAGCTCCGAGAGGCCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498082.1
CDS TCA 72 bp GGAGTCAGGAGGAGACGTGGCAACAGAATGGGGCTGTaGCTGCTTCGCGGGCACTGCCCCACCTTCTCCAAT +
Preference number: 6 (lower is better)
Translates to: GVRRRRGNRMGL*LLRGHCPTFSN
Trigger: ATTGGAGAAGGTGGGGCAGTGCCCGCGAAGCAGTCACAGCCCCATTCTGTTGCCACGTCTCCTCCTGACTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498082.1
CDS CAA 72 bp TGCCGTTCTTCCTCCAGGACGGATGTGAGCCCTCTCTaGCGCGCGTGCTCTCTTACTCGTCTGCCTGCTCCT +
Preference number: 6 (lower is better)
Translates to: CRSSSRTDVSPL*RACSLTRLPAP
Trigger: AGGAGCAGGCAGACGAGTAAGAGAGCACGCGCGCAAGAGAGGGCTCACATCCGTCCTGGAGGAAGAACGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288616.7
CDS CCA 72 bp CCAAACAGACTTGTCCTACTCCAGCCAGATCCCCGCTaGAAGGCAGTGAGGGCAATCGGAGCTGGCAGCATG +
Preference number: 6 (lower is better)
Translates to: PNRLVLLQPDPR*KAVRAIGAGSM
Trigger: CATGCTGCCAGCTCCGATTGCCCTCACTGCCTTCCAGCGGGGATCTGGCTGGAGTAGGACAAGTCTGTTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453000.1
CDS CCA 72 bp GCGACAAGGGACCTGGAAGTCACAAAATACCTAACCTaGGGGCCATCCACGTGGCAGCAGGCACTGGGTAGG +
Preference number: 6 (lower is better)
Translates to: ATRDLEVTKYLT*GPSTWQQALGR
Trigger: CCTACCCAGTGCCTGCTGCCACGTGGATGGCCCCCAGGTTAGGTATTTTGTGACTTCCAGGTCCCTTGTCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498082.1
CDS CCA 72 bp GCAGGAAGGAAGGAGAGGTCGCCCCAGCATGGCGATTaGCAGCAGCAGATCCCAAAGTTGAGCTCCTTCTCC +
Preference number: 6 (lower is better)
Translates to: AGRKERSPQHGD*QQQIPKLSSFS
Trigger: GGAGAAGGAGCTCAACTTTGGGATCTGCTGCTGCCAATCGCCATGCTGGGGCGACCTCTCCTTCCTTCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498082.1
CDS CAA 72 bp GGCAGGAAGGAAGGAGAGGTCGCCCCAGCATGGCGATaGGCAGCAGCAGATCCCAAAGTTGAGCTCCTTCTC +
Preference number: 6 (lower is better)
Translates to: GRKEGEVAPAWR*AAADPKVELLL
Trigger: GAGAAGGAGCTCAACTTTGGGATCTGCTGCTGCCAATCGCCATGCTGGGGCGACCTCTCCTTCCTTCCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498082.1
CDS CCA 72 bp CCAGCCCCTCCTCGCTCGTCTGCACCACCATGTAGCTaGTCTGTTCCTCCTGGCACATCTTCCTTGAGAGAT +
Preference number: 6 (lower is better)
Translates to: PAPPRSSAPPCS*SVPPGTSSLRD
Trigger: ATCTCTCAAGGAAGATGTGCCAGGAGGAACAGACCAGCTACATGGTGGTGCAGACGAGCGAGGAGGGGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288616.7
CDS CCA 72 bp AGAGAAGGCAGGAAGGAAGGAGAGGTCGCCCCAGCATaGCGATTGGCAGCAGCAGATCCCAAAGTTGAGCTC +
Preference number: 6 (lower is better)
Translates to: REGRKEGEVAPA*RLAAADPKVEL
Trigger: GAGCTCAACTTTGGGATCTGCTGCTGCCAATCGCCATGCTGGGGCGACCTCTCCTTCCTTCCTGCCTTCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498082.1
CDS TCA 72 bp GACCCTGAGAGTCAAGGAGCGGGGTTCAGAGAGCCCTaGGCGTGCACAGGCATCAAATTGGTCCAACAGACA +
Preference number: 6 (lower is better)
Translates to: DPESQGAGFREP*ACTGIKLVQQT
Trigger: TGTCTGTTGGACCAATTTGATGCCTGTGCACGCTCAGGGCTCTCTGAACCCCGCTCCTTGACTCTCAGGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453000.1
CDS CCA 72 bp CACATGTCTCCAGCCTCAAGCAGTGCCCAGGTCTCCTaGGCAATCAAGGCAACCCTGAATCTAGGCGTCAGA +
Preference number: 6 (lower is better)
Translates to: HMSPASSSAQVS*AIKATLNLGVR
Trigger: TCTGACGCCTAGATTCAGGGTTGCCTTGATTGCCCAGGAGACCTGGGCACTGCTTGAGGCTGGAGACATGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498082.1
CDS CAA 90 bp ACTAGAGAAGGCAGGAAGGAAGGAGAGGTCGCCCCAGCATGGCGATaGGCAGCAGCAGATCCCAAAGTTGAGCTCCTTCTCCAGTGTCAT +
Preference number: 6 (lower is better)
Translates to: TREGRKEGEVAPAWR*AAADPKVELLLQCH
Trigger: ATGACACTGGAGAAGGAGCTCAACTTTGGGATCTGCTGCTGCCAATCGCCATGCTGGGGCGACCTCTCCTTCCTTCCTGCCTTCTCTAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498082.1
CDS TCA 72 bp CTCAGTGGATACTTGACACAGTTGCCCATCCTAAGTTaGGGCAGCCCCTCTTGGGATCCCCGGGTCCATGAA +
Preference number: 6 (lower is better)
Translates to: LSGYLTQLPILS*GSPSWDPRVHE
Trigger: TTCATGGACCCGGGGATCCCAAGAGGGGCTGCCTCAACTTAGGATGGGCAACTGTGTCAAGTATCCACTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288616.7
ENST00000351200.6
CDS CCA 72 bp GTCACCTGGAGAGCTGATGGCAGAGGGGAACCAAGCTaGAGAAGGCTGCCGGATCATCTACATCAGATTAGC +
Preference number: 6 (lower is better)
Translates to: VTWRADGRGEPS*RRLPDHLHQIS
Trigger: GCTAATCTGATGTAGATGATCCGGCAGCCTTCTCCAGCTTGGTTCCCCTCTGCCATCAGCTCTCCAGGTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288616.7
CDS CCA 72 bp GAAGGACTGTTGAGTTGTGGCTGGGGAGGTGAGCTGTaGTCAGATCTTAGGGAGCCTGAGTGTCCAGTTGAG +
Preference number: 6 (lower is better)
Translates to: EGLLSCGWGGEL*SDLREPECPVE
Trigger: CTCAACTGGACACTCAGGCTCCCTAAGATCTGACCACAGCTCACCTCCCCAGCCACAACTCAACAGTCCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498082.1
CDS GCA 72 bp CTTCCCAGGATGCTGGGGCATTTCTCTTGCCTCCTGTaGACACCTTCAGCAGCTGGTTTCACAGAAGATACC +
Preference number: 6 (lower is better)
Translates to: LPRMLGHFSCLL*TPSAAGFTEDT
Trigger: GGTATCTTCTGTGAAACCAGCTGCTGAAGGTGTGCACAGGAGGCAAGAGAAATGCCCCAGCATCCTGGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498082.1
CDS CAA 90 bp CGTGCACAGGCATCAAATTGGTCCAACAGACAGAGTCTCCAATCCTaGACGGAAATGGTGGTTCCGGGGAGAGCTGAATGTGATGCCCTC +
Preference number: 6 (lower is better)
Translates to: RAQASNWSNRQSLQS*TEMVVPGRAECDAL
Trigger: GAGGGCATCACATTCAGCTCTCCCCGGAACCACCATTTCCGTCAAGGATTGGAGACTCTGTCTGTTGGACCAATTTGATGCCTGTGCACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453000.1
CDS GCA 72 bp ATTTATACTGCAGATAGGATTCCAATAGCCGCCCCATaGCTGCCTGCCTCTGTCCGTTACCTCTCGGAAAGC +
Preference number: 6 (lower is better)
Translates to: IYTADRIPIAAP*LPASVRYLSES
Trigger: GCTTTCCGAGAGGTAACGGACAGAGGCAGGCAGGCATGGGGCGGCTATTGGAATCCTATCTGCAGTATAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498082.1
CDS GCA 72 bp GCAGATCCCAAAGTTGAGCTCCTTCTCCAGTGTCATTaGCCCCCTTTACCAGAGACCTTTCTCTGTCCAAGC +
Preference number: 6 (lower is better)
Translates to: ADPKVELLLQCH*PPLPETFLCPS
Trigger: GCTTGGACAGAGAAAGGTCTCTGGTAAAGGGGGGCAATGACACTGGAGAAGGAGCTCAACTTTGGGATCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000498082.1
CDS CCA 72 bp GGTTCAGAGAGCCCTGAGCGTGCACAGGCATCAAATTaGTCCAACAGACAGAGTCTCCAATCCTTGACGGAA +
Preference number: 6 (lower is better)
Translates to: GSESPERAQASN*SNRQSLQSLTE
Trigger: TTCCGTCAAGGATTGGAGACTCTGTCTGTTGGACCAATTTGATGCCTGTGCACGCTCAGGGCTCTCTGAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453000.1
CDS CAA 72 bp TTAGGGCGGATTGATGGTTGCATGATGGATACACAATaGGAGGGCTCCATGGATGGCCACTGCTGGCTTGCT +
Preference number: 6 (lower is better)
Translates to: LGRIDGCMMDTQ*EGSMDGHCWLA
Trigger: AGCAAGCCAGCAGTGGCCATCCATGGAGCCCTCCAATTGTGTATCCATCATGCAACCATCAATCCGCCCTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498082.1
CDS CAA 90 bp GGGGAGGTGAGCTGTGGTCAGATCTTAGGGAGCCTGAGTGTCCAGTaGAGGAATGTAATGTTCAGAAAACACCTACCGTGGATGGATGCA +
Preference number: 6 (lower is better)
Translates to: GEVSCGQILGSLSVQ*RNVMFRKHLPWMDA
Trigger: TGCATCCATCCACGGTAGGTGTTTTCTGAACATTACATTCCTCAACTGGACACTCAGGCTCCCTAAGATCTGACCACAGCTCACCTCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498082.1
CDS CCA 72 bp CTCGCAGCTCACTGGTGCTTATTTCCCCATCACCATTaGTGTCAAACTAGAGAAGGCAGGAAGGAAGGAGAG +
Preference number: 6 (lower is better)
Translates to: LAAHWCLFPHHH*CQTREGRKEGE
Trigger: CTCTCCTTCCTTCCTGCCTTCTCTAGTTTGACACCAATGGTGATGGGGAAATAAGCACCAGTGAGCTGCGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498082.1
CDS TCA 72 bp CATCAAATTGGTCCAACAGACAGAGTCTCCAATCCTTaGCGGAAATGGTGGTTCCGGGGAGAGCTGAATGTG +
Preference number: 6 (lower is better)
Translates to: HQIGPTDRVSNP*RKWWFRGELNV
Trigger: CACATTCAGCTCTCCCCGGAACCACCATTTCCGTCAAGGATTGGAGACTCTGTCTGTTGGACCAATTTGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453000.1
CDS CAA 72 bp GCATCAAATTGGTCCAACAGACAGAGTCTCCAATCCTaGACGGAAATGGTGGTTCCGGGGAGAGCTGAATGT +
Preference number: 6 (lower is better)
Translates to: ASNWSNRQSLQS*TEMVVPGRAEC
Trigger: ACATTCAGCTCTCCCCGGAACCACCATTTCCGTCAAGGATTGGAGACTCTGTCTGTTGGACCAATTTGATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453000.1
CDS GCA 72 bp ACTCAGAGCCTAATGAGACAACATCCTTTCCCAAAATaGTCCCAACCTCCCAATTCAGTCAATCTCCAGGGC +
Preference number: 6 (lower is better)
Translates to: TQSLMRQHPFPK*SQPPNSVNLQG
Trigger: GCCCTGGAGATTGACTGAATTGGGAGGTTGGGAGCATTTTGGGAAAGGATGTTGTCTCATTAGGCTCTGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453000.1
CDS CAA 72 bp AGCTGTGGTCAGATCTTAGGGAGCCTGAGTGTCCAGTaGAGGAATGTAATGTTCAGAAAACACCTACCGTGG +
Preference number: 6 (lower is better)
Translates to: SCGQILGSLSVQ*RNVMFRKHLPW
Trigger: CCACGGTAGGTGTTTTCTGAACATTACATTCCTCAACTGGACACTCAGGCTCCCTAAGATCTGACCACAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498082.1
CDS TCA 72 bp CAAGTATGGGTAGAAGTATATGCAGACGAAGAGACATaGATGTGTGAATGGAAGTATAGAAGTGTGAACACA +
Preference number: 6 (lower is better)
Translates to: QVWVEVYADEET*MCEWKYRSVNT
Trigger: TGTGTTCACACTTCTATACTTCCATTCACACATTCATGTCTCTTCGTCTGCATATACTTCTACCCATACTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498082.1
CDS GCA 72 bp CAGATAAATGCATGGATAAATTGCTATAGGAATGATTaGTTAGAGATGGAGGAATGGATAAATAGGCATCTG +
Preference number: 6 (lower is better)
Translates to: QINAWINCYRND*LEMEEWINRHL
Trigger: CAGATGCCTATTTATCCATTCCTCCATCTCTAAGCAATCATTCCTATAGCAATTTATCCATGCATTTATCTG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498082.1