Pregenerated sensors for CABCOCO1 (Homo sapiens)
Ensembl gene IDs: ENSG00000183346Ensembl transcript IDs: ENST00000330194.2, ENST00000389639.3, ENST00000648843.3
Found 86 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTCAATAGTGTGGTACTGGTATGTTTTCACAGTGTTCCAGTAACGTaGCAGTCCGTTTGGGTCAAAATGGATGAAGTTATTATCATCTTT | + |
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Preference number: 1 (lower is better) Translates to: LNSVVLVCFHSVPVT*QSVWVKMDEVIIIF Trigger: AAAGATGATAATAACTTCATCCATTTTGACCCAAACGGACTGCCACGTTACTGGAACACTGTGAAAACATACCAGTACCACACTATTGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000330194.2 ENST00000648843.3 |
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| 3UTR CCA 90 bp | GTACTGGTATGTTTTCACAGTGTTCCAGTAACGTGGCAGTCCGTTTaGGTCAAAATGGATGAAGTTATTATCATCTTTCTTTATTTCTGG | + |
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Preference number: 1 (lower is better) Translates to: VLVCFHSVPVTWQSV*VKMDEVIIIFLYFW Trigger: CCAGAAATAAAGAAAGATGATAATAACTTCATCCATTTTGACCCAAACGGACTGCCACGTTACTGGAACACTGTGAAAACATACCAGTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000330194.2 ENST00000648843.3 |
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| 3UTR-3UTR CCA 90 bp | TGTGGTACTGGTATGTTTTCACAGTGTTCCAGTAACGTGGCAGTCCGTTTGGGTGAGGCTGTTATGGGATaGGAGATAGCAAAATTGGGA | + |
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Preference number: 2 (lower is better) Translates to: CGTGMFSQCSSNVAVRLGEAVMG*EIAKLG Trigger: TCCCAATTTTGCTATCTCCCATCCCATAACAGCCTC...ACCCAAACGGACTGCCACGTTACTGGAACACTGTGAAAACATACCAGTACCACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000330194.2 ENST00000648843.3 |
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| 3UTR-3UTR GCA 90 bp | TGTGGTACTGGTATGTTTTCACAGTGTTCCAGTAACGTGGCAGTCCGTTTGGGTTCTCATTACACTTGGTaGAATAAATTCAGAGGCTGT | + |
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Preference number: 2 (lower is better) Translates to: CGTGMFSQCSSNVAVRLGSHYTW*NKFRGC Trigger: ACAGCCTCTGAATTTATTGCACCAAGTGTAATGAGA...ACCCAAACGGACTGCCACGTTACTGGAACACTGTGAAAACATACCAGTACCACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000330194.2 ENST00000648843.3 |
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| 3UTR-3UTR TCA 90 bp | GGTCATGTATTCTCCTGGGAGAGTAACAAGATTAGAAATAACAAATACAGTACACCTTTCACAACTAAGTaGTGGAGACACGACGCTCCA | + |
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Preference number: 2 (lower is better) Translates to: GHVFSWESNKIRNNKYSTPFTTK*WRHDAP Trigger: TGGAGCGTCGTGTCTCCATCACTTAGTTGTGAAAGG...TGTACTGTATTTGTTATTTCTAATCTTGTTACTCTCCCAGGAGAATACATGACC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000330194.2 ENST00000648843.3 |
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| 3UTR-3UTR CCA 90 bp | GGTCATGTATTCTCCTGGGAGAGTAACAAGATTAGAAATAACAAATACAGTACAAGTGTTCCAGTAACGTaGCAGTCCGTTTGGGTCAAA | + |
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Preference number: 2 (lower is better) Translates to: GHVFSWESNKIRNNKYSTSVPVT*QSVWVK Trigger: TTTGACCCAAACGGACTGCCACGTTACTGGAACACT...TGTACTGTATTTGTTATTTCTAATCTTGTTACTCTCCCAGGAGAATACATGACC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000330194.2 ENST00000648843.3 |
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| 3UTR-3UTR GCA 90 bp | TTTATCCTCAATAGTGTGGTACTGGTATGTTTTCACAGTGTTCCAGTAACGTGGTCTCATTACACTTGGTaGAATAAATTCAGAGGCTGT | + |
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Preference number: 2 (lower is better) Translates to: FILNSVVLVCFHSVPVTWSHYTW*NKFRGC Trigger: ACAGCCTCTGAATTTATTGCACCAAGTGTAATGAGA...CCACGTTACTGGAACACTGTGAAAACATACCAGTACCACACTATTGAGGATAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000330194.2 ENST00000648843.3 |
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| 3UTR-3UTR CCA 90 bp | TTTATCCTCAATAGTGTGGTACTGGTATGTTTTCACAGTGTTCCAGTAACGTGGTGTTCTCATTACACTTaGTGCAATAAATTCAGAGGC | + |
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Preference number: 2 (lower is better) Translates to: FILNSVVLVCFHSVPVTWCSHYT*CNKFRG Trigger: GCCTCTGAATTTATTGCACCAAGTGTAATGAGAACA...CCACGTTACTGGAACACTGTGAAAACATACCAGTACCACACTATTGAGGATAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000330194.2 ENST00000648843.3 |
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| 3UTR-3UTR CCA 90 bp | GGTCATGTATTCTCCTGGGAGAGTAACAAGATTAGAAATAACAAATACAGTACACCGTTTGGGTCAAAATaGATGAAGTTATTATCATCT | + |
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Preference number: 2 (lower is better) Translates to: GHVFSWESNKIRNNKYSTPFGSK*MKLLSS Trigger: AGATGATAATAACTTCATCCATTTTGACCCAAACGG...TGTACTGTATTTGTTATTTCTAATCTTGTTACTCTCCCAGGAGAATACATGACC 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000330194.2 ENST00000648843.3 |
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| 3UTR CCA 72 bp | GTGGTACTGGTATGTTTTCACAGTGTTCCAGTAACGTaGCAGTCCGTTTGGGTCAAAATGGATGAAGTTATT | + |
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Preference number: 3 (lower is better) Translates to: VVLVCFHSVPVT*QSVWVKMDEVI Trigger: AATAACTTCATCCATTTTGACCCAAACGGACTGCCACGTTACTGGAACACTGTGAAAACATACCAGTACCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000330194.2 ENST00000648843.3 |
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| 3UTR CCA 72 bp | TGTTTTCACAGTGTTCCAGTAACGTGGCAGTCCGTTTaGGTCAAAATGGATGAAGTTATTATCATCTTTCTT | + |
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Preference number: 3 (lower is better) Translates to: CFHSVPVTWQSV*VKMDEVIIIFL Trigger: AAGAAAGATGATAATAACTTCATCCATTTTGACCCAAACGGACTGCCACGTTACTGGAACACTGTGAAAACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000330194.2 ENST00000648843.3 |
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| 3UTR CCA 72 bp | TTCAAACTCTTGTATACAAAATGTTCTCATTACACTTaGTGCAATAAATTCAGAGGCTGTTATGGGATGGGA | + |
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Preference number: 3 (lower is better) Translates to: FKLLYTKCSHYT*CNKFRGCYGMG Trigger: TCCCATCCCATAACAGCCTCTGAATTTATTGCACCAAGTGTAATGAGAACATTTTGTATACAAGAGTTTGAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000330194.2 ENST00000648843.3 |
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| CDS-3UTR GCA 90 bp | TGTGGTACTGGTATGTTTTCACAGTGTTCCAGTAACGTGGCAGTCCGTTTGGGTAGCCGGGGCCAGACGTaGGGCGCCTCTTCGGAGACC | + |
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Preference number: 4 (lower is better) Translates to: CGTGMFSQCSSNVAVRLGSRGQT*GASSET Trigger: GGTCTCCGAAGAGGCGCCGCACGTCTGGCCCCGGCT...ACCCAAACGGACTGCCACGTTACTGGAACACTGTGAAAACATACCAGTACCACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330194.2 |
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| CDS-3UTR TCA 90 bp | AGTGATGGAGACACGACGCTCCAGAGAGTCTGTTATTCTGGCTGGTTTTGTTTGTCCGCGGACTGGGAATaGGCGCTCGGAGGTCTCTGG | + |
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Preference number: 4 (lower is better) Translates to: SDGDTTLQRVCYSGWFCLSADWE*ALGGLW Trigger: CCAGAGACCTCCGAGCGCTCATTCCCAGTCCGCGGA...CAAACAAAACCAGCCAGAATAACAGACTCTCTGGAGCGTCGTGTCTCCATCACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330194.2 |
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| CDS-3UTR CCA 90 bp | TTTATCCTCAATAGTGTGGTACTGGTATGTTTTCACAGTGTTCCAGTAACGTGGCCTCCGATTCGGGCGTaGTTCCCGCCGGGGTCGGCC | + |
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Preference number: 4 (lower is better) Translates to: FILNSVVLVCFHSVPVTWPPIRA*FPPGSA Trigger: GGCCGACCCCGGCGGGAACCACGCCCGAATCGGAGG...CCACGTTACTGGAACACTGTGAAAACATACCAGTACCACACTATTGAGGATAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330194.2 |
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| CDS-3UTR CCA 90 bp | GTTTTCCTTTCACAACTAAGTGATGGAGACACGACGCTCCAGAGAGTCTGTTATGCGCTCGGAGGTCTCTaGTACCGGCACCGGTACCGG | + |
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Preference number: 4 (lower is better) Translates to: VFLSQLSDGDTTLQRVCYALGGL*YRHRYR Trigger: CCGGTACCGGTGCCGGTACCAGAGACCTCCGAGCGC...ATAACAGACTCTCTGGAGCGTCGTGTCTCCATCACTTAGTTGTGAAAGGAAAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330194.2 |
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| CDS-3UTR CCA 90 bp | AGTGATGGAGACACGACGCTCCAGAGAGTCTGTTATTCTGGCTGGTTTTGTTTGTTCGGAGACCGGATTTaGCTTGGCCGCAGACTCCGC | + |
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Preference number: 4 (lower is better) Translates to: SDGDTTLQRVCYSGWFCLFGDRI*LGRRLR Trigger: GCGGAGTCTGCGGCCAAGCCAAATCCGGTCTCCGAA...CAAACAAAACCAGCCAGAATAACAGACTCTCTGGAGCGTCGTGTCTCCATCACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330194.2 |
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| CDS-3UTR CCA 90 bp | TTTATCCTCAATAGTGTGGTACTGGTATGTTTTCACAGTGTTCCAGTAACGTGGTCTCCGATTCGGGCGTaGTTCCCGCCGGGGTCGGCC | + |
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Preference number: 4 (lower is better) Translates to: FILNSVVLVCFHSVPVTWSPIRA*FPPGSA Trigger: GGCCGACCCCGGCGGGAACCACGCCCGAATCGGAGA...CCACGTTACTGGAACACTGTGAAAACATACCAGTACCACACTATTGAGGATAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000648843.3 |
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| CDS-3UTR CCA 90 bp | GTTTTCCTTTCACAACTAAGTGATGGAGACACGACGCTCCAGAGAGTCTGTTATAGACCGGATTTGGCTTaGCCGCAGACTCCGCGGACT | + |
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Preference number: 4 (lower is better) Translates to: VFLSQLSDGDTTLQRVCYRPDLA*PQTPRT Trigger: AGTCCGCGGAGTCTGCGGCCAAGCCAAATCCGGTCT...ATAACAGACTCTCTGGAGCGTCGTGTCTCCATCACTTAGTTGTGAAAGGAAAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330194.2 |
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| CDS-3UTR GCA 90 bp | TTTATCCTCAATAGTGTGGTACTGGTATGTTTTCACAGTGTTCCAGTAACGTGGCAGGGAGTCGTCCCCTaGGACATCGCCGCAATCTCG | + |
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Preference number: 4 (lower is better) Translates to: FILNSVVLVCFHSVPVTWQGVVP*DIAAIS Trigger: CGAGATTGCGGCGATGTCGCAGGGGACGACTCCCTG...CCACGTTACTGGAACACTGTGAAAACATACCAGTACCACACTATTGAGGATAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000648843.3 |
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| CDS-3UTR TCA 90 bp | AGTGTGGTACTGGTATGTTTTCACAGTGTTCCAGTAACGTGGCAGTCCGTTTGGGGCCACATGCAGACTTaGCAACCTCTATCACTTGCT | + |
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Preference number: 4 (lower is better) Translates to: SVVLVCFHSVPVTWQSVWGHMQT*QPLSLA Trigger: AGCAAGTGATAGAGGTTGTCAAGTCTGCATGTGGCC...CCAAACGGACTGCCACGTTACTGGAACACTGTGAAAACATACCAGTACCACACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000330194.2 ENST00000648843.3 |
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| CDS-3UTR TCA 90 bp | AGTGATGGAGACACGACGCTCCAGAGAGTCTGTTATTCTGGCTGGTTTTGTTTGCCTTTCACAACTAAGTaGTGGAGACACGACGCTCCA | + |
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Preference number: 4 (lower is better) Translates to: SDGDTTLQRVCYSGWFCLPFTTK*WRHDAP Trigger: TGGAGCGTCGTGTCTCCATCACTTAGTTGTGAAAGG...CAAACAAAACCAGCCAGAATAACAGACTCTCTGGAGCGTCGTGTCTCCATCACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000330194.2 ENST00000648843.3 |
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| CDS-3UTR TCA 90 bp | CTTTCACAACTAAGTGATGGAGACACGACGCTCCAGAGAGTCTGTTATTCTGGCCCTTTCACAACTAAGTaGTGGAGACACGACGCTCCA | + |
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Preference number: 4 (lower is better) Translates to: LSQLSDGDTTLQRVCYSGPFTTK*WRHDAP Trigger: TGGAGCGTCGTGTCTCCATCACTTAGTTGTGAAAGG...GCCAGAATAACAGACTCTCTGGAGCGTCGTGTCTCCATCACTTAGTTGTGAAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000330194.2 ENST00000648843.3 |
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| CDS-3UTR TCA 90 bp | AGTGTGGTACTGGTATGTTTTCACAGTGTTCCAGTAACGTGGCAGTCCGTTTGGTCAGGGCCTTGTTCTTaGTCCAACCTCTTCATTTCC | + |
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Preference number: 4 (lower is better) Translates to: SVVLVCFHSVPVTWQSVWSGPCS*SNLFIS Trigger: GGAAATGAAGAGGTTGGATCAAGAACAAGGCCCTGA...CCAAACGGACTGCCACGTTACTGGAACACTGTGAAAACATACCAGTACCACACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000330194.2 ENST00000648843.3 |
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| CDS-3UTR GCA 90 bp | AGTGTGGTACTGGTATGTTTTCACAGTGTTCCAGTAACGTGGCAGTCCGTTTGGTGGGAAAGGGCCACATaGAGACTTGACAACCTCTAT | + |
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Preference number: 4 (lower is better) Translates to: SVVLVCFHSVPVTWQSVWWERAT*RLDNLY Trigger: ATAGAGGTTGTCAAGTCTGCATGTGGCCCTTTCCCA...CCAAACGGACTGCCACGTTACTGGAACACTGTGAAAACATACCAGTACCACACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000330194.2 ENST00000648843.3 |
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| CDS-3UTR GCA 90 bp | CTTTCACAACTAAGTGATGGAGACACGACGCTCCAGAGAGTCTGTTATTCTGGCTGGGAAAGGGCCACATaGAGACTTGACAACCTCTAT | + |
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Preference number: 4 (lower is better) Translates to: LSQLSDGDTTLQRVCYSGWERAT*RLDNLY Trigger: ATAGAGGTTGTCAAGTCTGCATGTGGCCCTTTCCCA...GCCAGAATAACAGACTCTCTGGAGCGTCGTGTCTCCATCACTTAGTTGTGAAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000330194.2 ENST00000648843.3 |
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| CDS-3UTR CCA 90 bp | AGTGATGGAGACACGACGCTCCAGAGAGTCTGTTATTCTGGCTGGTTTTGTTTGAGTGTTCCAGTAACGTaGCAGTCCGTTTGGGTCAAA | + |
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Preference number: 4 (lower is better) Translates to: SDGDTTLQRVCYSGWFCLSVPVT*QSVWVK Trigger: TTTGACCCAAACGGACTGCCACGTTACTGGAACACT...CAAACAAAACCAGCCAGAATAACAGACTCTCTGGAGCGTCGTGTCTCCATCACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000330194.2 ENST00000648843.3 |
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| CDS-3UTR TCA 90 bp | GTTTTCCTTTCACAACTAAGTGATGGAGACACGACGCTCCAGAGAGTCTGTTATGGCCACATGCAGACTTaGCAACCTCTATCACTTGCT | + |
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Preference number: 4 (lower is better) Translates to: VFLSQLSDGDTTLQRVCYGHMQT*QPLSLA Trigger: AGCAAGTGATAGAGGTTGTCAAGTCTGCATGTGGCC...ATAACAGACTCTCTGGAGCGTCGTGTCTCCATCACTTAGTTGTGAAAGGAAAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000330194.2 ENST00000648843.3 |
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| CDS-3UTR CCA 90 bp | AGTGTGGTACTGGTATGTTTTCACAGTGTTCCAGTAACGTGGCAGTCCGTTTGGGAGGCTGTTATGGGATaGGAGATAGCAAAATTGGGA | + |
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Preference number: 4 (lower is better) Translates to: SVVLVCFHSVPVTWQSVWEAVMG*EIAKLG Trigger: TCCCAATTTTGCTATCTCCCATCCCATAACAGCCTC...CCAAACGGACTGCCACGTTACTGGAACACTGTGAAAACATACCAGTACCACACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000330194.2 ENST00000648843.3 |
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| CDS-3UTR CCA 90 bp | AGTGATGGAGACACGACGCTCCAGAGAGTCTGTTATTCTGGCTGGTTTTGTTTGACGTGGCAGTCCGTTTaGGTCAAAATGGATGAAGTT | + |
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Preference number: 4 (lower is better) Translates to: SDGDTTLQRVCYSGWFCLTWQSV*VKMDEV Trigger: AACTTCATCCATTTTGACCCAAACGGACTGCCACGT...CAAACAAAACCAGCCAGAATAACAGACTCTCTGGAGCGTCGTGTCTCCATCACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000330194.2 ENST00000648843.3 |
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| CDS-3UTR GCA 90 bp | TGTGGTACTGGTATGTTTTCACAGTGTTCCAGTAACGTGGCAGTCCGTTTGGGTCAGTCCTCACTCTTTTaGGAATGTGTTGGTCCTATT | + |
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Preference number: 4 (lower is better) Translates to: CGTGMFSQCSSNVAVRLGQSSLF*ECVGPI Trigger: AATAGGACCAACACATTCGCAAAAGAGTGAGGACTG...ACCCAAACGGACTGCCACGTTACTGGAACACTGTGAAAACATACCAGTACCACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000330194.2 ENST00000648843.3 |
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| CDS-3UTR CCA 90 bp | GTTTTCCTTTCACAACTAAGTGATGGAGACACGACGCTCCAGAGAGTCTGTTATAGTGTTCCAGTAACGTaGCAGTCCGTTTGGGTCAAA | + |
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Preference number: 4 (lower is better) Translates to: VFLSQLSDGDTTLQRVCYSVPVT*QSVWVK Trigger: TTTGACCCAAACGGACTGCCACGTTACTGGAACACT...ATAACAGACTCTCTGGAGCGTCGTGTCTCCATCACTTAGTTGTGAAAGGAAAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000330194.2 ENST00000648843.3 |
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| CDS-3UTR TCA 90 bp | TGTGGTACTGGTATGTTTTCACAGTGTTCCAGTAACGTGGCAGTCCGTTTGGGTGACTTGATCCAGCACTaGTTTTACATCTTCAATGGT | + |
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Preference number: 4 (lower is better) Translates to: CGTGMFSQCSSNVAVRLGDLIQH*FYIFNG Trigger: ACCATTGAAGATGTAAAATCAGTGCTGGATCAAGTC...ACCCAAACGGACTGCCACGTTACTGGAACACTGTGAAAACATACCAGTACCACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000330194.2 ENST00000648843.3 |
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| CDS-3UTR TCA 90 bp | TGTGGTACTGGTATGTTTTCACAGTGTTCCAGTAACGTGGCAGTCCGTTTGGGTATGTCATCTGTGACTTaGTCCAGCACTGATTTTACA | + |
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Preference number: 4 (lower is better) Translates to: CGTGMFSQCSSNVAVRLGMSSVT*SSTDFT Trigger: TGTAAAATCAGTGCTGGATCAAGTCACAGATGACAT...ACCCAAACGGACTGCCACGTTACTGGAACACTGTGAAAACATACCAGTACCACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000330194.2 ENST00000648843.3 |
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| CDS-3UTR GCA 90 bp | TGTGGTACTGGTATGTTTTCACAGTGTTCCAGTAACGTGGCAGTCCGTTTGGGTGACAGAATCTTTTCATaGTCCTGGAATTCAGTGTCT | + |
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Preference number: 4 (lower is better) Translates to: CGTGMFSQCSSNVAVRLGDRIFS*SWNSVS Trigger: AGACACTGAATTCCAGGAGCATGAAAAGATTCTGTC...ACCCAAACGGACTGCCACGTTACTGGAACACTGTGAAAACATACCAGTACCACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000648843.3 |
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| CDS-3UTR CCA 90 bp | TGTGGTACTGGTATGTTTTCACAGTGTTCCAGTAACGTGGCAGTCCGTTTGGGTCTTTTGCGAATGTGTTaGTCCTATTTCAGCCATAAC | + |
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Preference number: 4 (lower is better) Translates to: CGTGMFSQCSSNVAVRLGLLRMC*SYFSHN Trigger: GTTATGGCTGAAATAGGACCAACACATTCGCAAAAG...ACCCAAACGGACTGCCACGTTACTGGAACACTGTGAAAACATACCAGTACCACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000330194.2 ENST00000648843.3 |
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| CDS-3UTR CCA 90 bp | GTTTTCCTTTCACAACTAAGTGATGGAGACACGACGCTCCAGAGAGTCTGTTATACGTGGCAGTCCGTTTaGGTCAAAATGGATGAAGTT | + |
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Preference number: 4 (lower is better) Translates to: VFLSQLSDGDTTLQRVCYTWQSV*VKMDEV Trigger: AACTTCATCCATTTTGACCCAAACGGACTGCCACGT...ATAACAGACTCTCTGGAGCGTCGTGTCTCCATCACTTAGTTGTGAAAGGAAAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000330194.2 ENST00000648843.3 |
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| CDS-3UTR CCA 90 bp | AGTGTGGTACTGGTATGTTTTCACAGTGTTCCAGTAACGTGGCAGTCCGTTTGGGGTCATGTATTCTCCTaGGAGAGTAACAAGATTAGA | + |
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Preference number: 4 (lower is better) Translates to: SVVLVCFHSVPVTWQSVWGHVFS*ESNKIR Trigger: TCTAATCTTGTTACTCTCCCAGGAGAATACATGACC...CCAAACGGACTGCCACGTTACTGGAACACTGTGAAAACATACCAGTACCACACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000330194.2 ENST00000648843.3 |
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| CDS-3UTR TCA 90 bp | AGTGATGGAGACACGACGCTCCAGAGAGTCTGTTATTCTGGCTGGTTTTGTTTGTTAAAATGTCATCTGTaGCTTGATCCAGCACTGATT | + |
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Preference number: 4 (lower is better) Translates to: SDGDTTLQRVCYSGWFCLLKCHL*LDPALI Trigger: AATCAGTGCTGGATCAAGTCACAGATGACATTTTAA...CAAACAAAACCAGCCAGAATAACAGACTCTCTGGAGCGTCGTGTCTCCATCACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000330194.2 ENST00000648843.3 |
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| CDS-3UTR TCA 90 bp | TGTGGTACTGGTATGTTTTCACAGTGTTCCAGTAACGTGGCAGTCCGTTTGGGTTTAAAATGTCATCTGTaGCTTGATCCAGCACTGATT | + |
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Preference number: 4 (lower is better) Translates to: CGTGMFSQCSSNVAVRLGLKCHL*LDPALI Trigger: AATCAGTGCTGGATCAAGTCACAGATGACATTTTAA...ACCCAAACGGACTGCCACGTTACTGGAACACTGTGAAAACATACCAGTACCACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000330194.2 ENST00000648843.3 |
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| CDS-3UTR TCA 90 bp | GTTTTCCTTTCACAACTAAGTGATGGAGACACGACGCTCCAGAGAGTCTGTTATATTCTCAGTTTTTCTTaGACTCCATCGATGTCCTCC | + |
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Preference number: 4 (lower is better) Translates to: VFLSQLSDGDTTLQRVCYILSFS*TPSMSS Trigger: GGAGGACATCGATGGAGTTCAAGAAAAACTGAGAAT...ATAACAGACTCTCTGGAGCGTCGTGTCTCCATCACTTAGTTGTGAAAGGAAAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000648843.3 |
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| CDS-3UTR GCA 90 bp | AGTGATGGAGACACGACGCTCCAGAGAGTCTGTTATTCTGGCTGGTTTTGTTTGACAACCTCTATCACTTaGTCAGTTCCTATCACAATT | + |
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Preference number: 4 (lower is better) Translates to: SDGDTTLQRVCYSGWFCLTTSIT*SVPITI Trigger: AATTGTGATAGGAACTGAGCAAGTGATAGAGGTTGT...CAAACAAAACCAGCCAGAATAACAGACTCTCTGGAGCGTCGTGTCTCCATCACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000330194.2 ENST00000648843.3 |
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| CDS-3UTR GCA 90 bp | AGTGTGGTACTGGTATGTTTTCACAGTGTTCCAGTAACGTGGCAGTCCGTTTGGTTATCTCGGTCTGAATaGCGATTAAAATGTCATCTG | + |
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Preference number: 4 (lower is better) Translates to: SVVLVCFHSVPVTWQSVWLSRSE*RLKCHL Trigger: CAGATGACATTTTAATCGGCATTCAGACCGAGATAA...CCAAACGGACTGCCACGTTACTGGAACACTGTGAAAACATACCAGTACCACACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000330194.2 ENST00000648843.3 |
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| CDS-3UTR GCA 90 bp | CTTTCACAACTAAGTGATGGAGACACGACGCTCCAGAGAGTCTGTTATTCTGGCCAATTTTTCTATTCGTaGATTAAAGGCCTCTTCCTG | + |
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Preference number: 4 (lower is better) Translates to: LSQLSDGDTTLQRVCYSGQFFYS*IKGLFL Trigger: CAGGAAGAGGCCTTTAATGCACGAATAGAAAAATTG...GCCAGAATAACAGACTCTCTGGAGCGTCGTGTCTCCATCACTTAGTTGTGAAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000330194.2 ENST00000648843.3 |
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| CDS-3UTR GCA 90 bp | AGTGATGGAGACACGACGCTCCAGAGAGTCTGTTATTCTGGCTGGTTTTGTTTGCAATTTTTCTATTCGTaGATTAAAGGCCTCTTCCTG | + |
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Preference number: 4 (lower is better) Translates to: SDGDTTLQRVCYSGWFCLQFFYS*IKGLFL Trigger: CAGGAAGAGGCCTTTAATGCACGAATAGAAAAATTG...CAAACAAAACCAGCCAGAATAACAGACTCTCTGGAGCGTCGTGTCTCCATCACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000330194.2 ENST00000648843.3 |
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| CDS-3UTR GCA 90 bp | CTTTCACAACTAAGTGATGGAGACACGACGCTCCAGAGAGTCTGTTATTCTGGCTCTCATTACACTTGGTaGAATAAATTCAGAGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LSQLSDGDTTLQRVCYSGSHYTW*NKFRGC Trigger: ACAGCCTCTGAATTTATTGCACCAAGTGTAATGAGA...GCCAGAATAACAGACTCTCTGGAGCGTCGTGTCTCCATCACTTAGTTGTGAAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000330194.2 ENST00000648843.3 |
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| CDS-3UTR GCA 90 bp | AGTGATGGAGACACGACGCTCCAGAGAGTCTGTTATTCTGGCTGGTTTTGTTTGTCTCATTACACTTGGTaGAATAAATTCAGAGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: SDGDTTLQRVCYSGWFCLSHYTW*NKFRGC Trigger: ACAGCCTCTGAATTTATTGCACCAAGTGTAATGAGA...CAAACAAAACCAGCCAGAATAACAGACTCTCTGGAGCGTCGTGTCTCCATCACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000330194.2 ENST00000648843.3 |
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| CDS-3UTR CCA 90 bp | TGTGGTACTGGTATGTTTTCACAGTGTTCCAGTAACGTGGCAGTCCGTTTGGGTTGTTCTCATTACACTTaGTGCAATAAATTCAGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: CGTGMFSQCSSNVAVRLGCSHYT*CNKFRG Trigger: GCCTCTGAATTTATTGCACCAAGTGTAATGAGAACA...ACCCAAACGGACTGCCACGTTACTGGAACACTGTGAAAACATACCAGTACCACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000330194.2 ENST00000648843.3 |
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| CDS-3UTR CCA 90 bp | AGTGTGGTACTGGTATGTTTTCACAGTGTTCCAGTAACGTGGCAGTCCGTTTGGTCAATAGTGTGGTACTaGTATGTTTTCACAGTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: SVVLVCFHSVPVTWQSVWSIVWY*YVFTVF Trigger: GAACACTGTGAAAACATACCAGTACCACACTATTGA...CCAAACGGACTGCCACGTTACTGGAACACTGTGAAAACATACCAGTACCACACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000330194.2 ENST00000648843.3 |
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| CDS-3UTR TCA 90 bp | TTTATCCTCAATAGTGTGGTACTGGTATGTTTTCACAGTGTTCCAGTAACGTGGAGTGATTTGGGCAACTaGAAGAAAATCCGGAGACAG | + |
|
Preference number: 4 (lower is better) Translates to: FILNSVVLVCFHSVPVTWSDLGN*KKIRRQ Trigger: CTGTCTCCGGATTTTCTTTCAGTTGCCCAAATCACT...CCACGTTACTGGAACACTGTGAAAACATACCAGTACCACACTATTGAGGATAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000648843.3 |
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| CDS-3UTR CCA 90 bp | AGTGTGGTACTGGTATGTTTTCACAGTGTTCCAGTAACGTGGCAGTCCGTTTGGCCGTTTGGGTCAAAATaGATGAAGTTATTATCATCT | + |
|
Preference number: 4 (lower is better) Translates to: SVVLVCFHSVPVTWQSVWPFGSK*MKLLSS Trigger: AGATGATAATAACTTCATCCATTTTGACCCAAACGG...CCAAACGGACTGCCACGTTACTGGAACACTGTGAAAACATACCAGTACCACACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000330194.2 ENST00000648843.3 |
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| CDS-3UTR CCA 90 bp | AGTGTGGTACTGGTATGTTTTCACAGTGTTCCAGTAACGTGGCAGTCCGTTTGGTTATCCTCAATAGTGTaGTACTGGTATGTTTTCACA | + |
|
Preference number: 4 (lower is better) Translates to: SVVLVCFHSVPVTWQSVWLSSIV*YWYVFT Trigger: TGTGAAAACATACCAGTACCACACTATTGAGGATAA...CCAAACGGACTGCCACGTTACTGGAACACTGTGAAAACATACCAGTACCACACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000330194.2 ENST00000648843.3 |
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| CDS-3UTR CCA 90 bp | AGTGATGGAGACACGACGCTCCAGAGAGTCTGTTATTCTGGCTGGTTTTGTTTGTTATCCTCAATAGTGTaGTACTGGTATGTTTTCACA | + |
|
Preference number: 4 (lower is better) Translates to: SDGDTTLQRVCYSGWFCLLSSIV*YWYVFT Trigger: TGTGAAAACATACCAGTACCACACTATTGAGGATAA...CAAACAAAACCAGCCAGAATAACAGACTCTCTGGAGCGTCGTGTCTCCATCACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000330194.2 ENST00000648843.3 |
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| CDS-3UTR CCA 90 bp | GTTTTCCTTTCACAACTAAGTGATGGAGACACGACGCTCCAGAGAGTCTGTTATTGTTCTCATTACACTTaGTGCAATAAATTCAGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: VFLSQLSDGDTTLQRVCYCSHYT*CNKFRG Trigger: GCCTCTGAATTTATTGCACCAAGTGTAATGAGAACA...ATAACAGACTCTCTGGAGCGTCGTGTCTCCATCACTTAGTTGTGAAAGGAAAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000330194.2 ENST00000648843.3 |
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| CDS-3UTR CCA 90 bp | GTTTTCCTTTCACAACTAAGTGATGGAGACACGACGCTCCAGAGAGTCTGTTATCCGTTTGGGTCAAAATaGATGAAGTTATTATCATCT | + |
|
Preference number: 4 (lower is better) Translates to: VFLSQLSDGDTTLQRVCYPFGSK*MKLLSS Trigger: AGATGATAATAACTTCATCCATTTTGACCCAAACGG...ATAACAGACTCTCTGGAGCGTCGTGTCTCCATCACTTAGTTGTGAAAGGAAAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000330194.2 ENST00000648843.3 |
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| CDS-3UTR CCA 90 bp | TTTATCCTCAATAGTGTGGTACTGGTATGTTTTCACAGTGTTCCAGTAACGTGGGGTCATGTATTCTCCTaGGAGAGTAACAAGATTAGA | + |
|
Preference number: 4 (lower is better) Translates to: FILNSVVLVCFHSVPVTWGHVFS*ESNKIR Trigger: TCTAATCTTGTTACTCTCCCAGGAGAATACATGACC...CCACGTTACTGGAACACTGTGAAAACATACCAGTACCACACTATTGAGGATAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000330194.2 ENST00000648843.3 |
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| CDS-3UTR GCA 90 bp | GGTCATGTATTCTCCTGGGAGAGTAACAAGATTAGAAATAACAAATACAGTACACAGTCCTCACTCTTTTaGGAATGTGTTGGTCCTATT | + |
|
Preference number: 4 (lower is better) Translates to: GHVFSWESNKIRNNKYSTQSSLF*ECVGPI Trigger: AATAGGACCAACACATTCGCAAAAGAGTGAGGACTG...TGTACTGTATTTGTTATTTCTAATCTTGTTACTCTCCCAGGAGAATACATGACC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000330194.2 ENST00000648843.3 |
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| CDS-3UTR TCA 90 bp | GGTCATGTATTCTCCTGGGAGAGTAACAAGATTAGAAATAACAAATACAGTACAATGTCATCTGTGACTTaGTCCAGCACTGATTTTACA | + |
|
Preference number: 4 (lower is better) Translates to: GHVFSWESNKIRNNKYSTMSSVT*SSTDFT Trigger: TGTAAAATCAGTGCTGGATCAAGTCACAGATGACAT...TGTACTGTATTTGTTATTTCTAATCTTGTTACTCTCCCAGGAGAATACATGACC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000330194.2 ENST00000648843.3 |
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| CDS-3UTR TCA 90 bp | GGTCATGTATTCTCCTGGGAGAGTAACAAGATTAGAAATAACAAATACAGTACACCATTAACAAATCAGTaGTTTGGGCAACTGAAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: GHVFSWESNKIRNNKYSTPLTNQ*FGQLKE Trigger: TTCTTTCAGTTGCCCAAATCACTGATTTGTTAATGG...TGTACTGTATTTGTTATTTCTAATCTTGTTACTCTCCCAGGAGAATACATGACC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648843.3 |
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| CDS-3UTR GCA 90 bp | GGTCATGTATTCTCCTGGGAGAGTAACAAGATTAGAAATAACAAATACAGTACAACAACCTCTATCACTTaGTCAGTTCCTATCACAATT | + |
|
Preference number: 4 (lower is better) Translates to: GHVFSWESNKIRNNKYSTTTSIT*SVPITI Trigger: AATTGTGATAGGAACTGAGCAAGTGATAGAGGTTGT...TGTACTGTATTTGTTATTTCTAATCTTGTTACTCTCCCAGGAGAATACATGACC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000330194.2 ENST00000648843.3 |
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| CDS-3UTR CAA 90 bp | AGTGTGGTACTGGTATGTTTTCACAGTGTTCCAGTAACGTGGCAGTCCGTTTGGGAGACCGGATTTGGCTaGGCCGCAGACTCCGCGGAC | + |
|
Preference number: 5 (lower is better) Translates to: SVVLVCFHSVPVTWQSVWETGFG*AADSAD Trigger: GTCCGCGGAGTCTGCGGCCAAGCCAAATCCGGTCTC...CCAAACGGACTGCCACGTTACTGGAACACTGTGAAAACATACCAGTACCACACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330194.2 |
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| CDS-3UTR CAA 90 bp | AGTGTGGTACTGGTATGTTTTCACAGTGTTCCAGTAACGTGGCAGTCCGTTTGGCTTCGGAGACCGGATTaGGCTTGGCCGCAGACTCCG | + |
|
Preference number: 5 (lower is better) Translates to: SVVLVCFHSVPVTWQSVWLRRPD*AWPQTP Trigger: CGGAGTCTGCGGCCAAGCCAAATCCGGTCTCCGAAG...CCAAACGGACTGCCACGTTACTGGAACACTGTGAAAACATACCAGTACCACACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330194.2 |
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| CDS-3UTR CAA 90 bp | CTTTCACAACTAAGTGATGGAGACACGACGCTCCAGAGAGTCTGTTATTCTGGCGGGCCACATGCAGACTaGACAACCTCTATCACTTGC | + |
|
Preference number: 5 (lower is better) Translates to: LSQLSDGDTTLQRVCYSGGPHAD*TTSITC Trigger: GCAAGTGATAGAGGTTGTCAAGTCTGCATGTGGCCC...GCCAGAATAACAGACTCTCTGGAGCGTCGTGTCTCCATCACTTAGTTGTGAAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000330194.2 ENST00000648843.3 |
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| CDS-3UTR CAA 90 bp | AGTGTGGTACTGGTATGTTTTCACAGTGTTCCAGTAACGTGGCAGTCCGTTTGGCTTCTTCCAGAGGATTaGGGAAAGGGCCACATGCAG | + |
|
Preference number: 5 (lower is better) Translates to: SVVLVCFHSVPVTWQSVWLLPED*GKGHMQ Trigger: CTGCATGTGGCCCTTTCCCAAATCCTCTGGAAGAAG...CCAAACGGACTGCCACGTTACTGGAACACTGTGAAAACATACCAGTACCACACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000330194.2 ENST00000648843.3 |
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| CDS-3UTR CAA 90 bp | CTTTCACAACTAAGTGATGGAGACACGACGCTCCAGAGAGTCTGTTATTCTGGCCTTCTTCCAGAGGATTaGGGAAAGGGCCACATGCAG | + |
|
Preference number: 5 (lower is better) Translates to: LSQLSDGDTTLQRVCYSGLLPED*GKGHMQ Trigger: CTGCATGTGGCCCTTTCCCAAATCCTCTGGAAGAAG...GCCAGAATAACAGACTCTCTGGAGCGTCGTGTCTCCATCACTTAGTTGTGAAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000330194.2 ENST00000648843.3 |
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| CDS GCA 90 bp | GTGATTTGGGCAACTGAAAGAAAATCCGGAGACAGAATCTTTTCATaGTCCTGGAATTCAGTGTCTCTCTCCGATTCGGGCGTGGTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: VIWATERKSGDRIFS*SWNSVSLSDSGVVP Trigger: GGGAACCACGCCCGAATCGGAGAGAGACACTGAATTCCAGGAGCATGAAAAGATTCTGTCTCCGGATTTTCTTTCAGTTGCCCAAATCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000648843.3 |
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| CDS-3UTR CAA 90 bp | CTTTCACAACTAAGTGATGGAGACACGACGCTCCAGAGAGTCTGTTATTCTGGCAGACTCCTCAGGGCCTaGTTCTTGATCCAACCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: LSQLSDGDTTLQRVCYSGRLLRA*FLIQPL Trigger: AAGAGGTTGGATCAAGAACAAGGCCCTGAGGAGTCT...GCCAGAATAACAGACTCTCTGGAGCGTCGTGTCTCCATCACTTAGTTGTGAAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000330194.2 ENST00000648843.3 |
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| CDS-3UTR CAA 90 bp | AGTGTGGTACTGGTATGTTTTCACAGTGTTCCAGTAACGTGGCAGTCCGTTTGGCCAGTCCTCACTCTTTaGCGAATGTGTTGGTCCTAT | + |
|
Preference number: 5 (lower is better) Translates to: SVVLVCFHSVPVTWQSVWPVLTL*RMCWSY Trigger: ATAGGACCAACACATTCGCAAAAGAGTGAGGACTGG...CCAAACGGACTGCCACGTTACTGGAACACTGTGAAAACATACCAGTACCACACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000330194.2 ENST00000648843.3 |
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| CDS-3UTR CAA 90 bp | AGTGTGGTACTGGTATGTTTTCACAGTGTTCCAGTAACGTGGCAGTCCGTTTGGCTCAGGGCCTTGTTCTaGATCCAACCTCTTCATTTC | + |
|
Preference number: 5 (lower is better) Translates to: SVVLVCFHSVPVTWQSVWLRALF*IQPLHF Trigger: GAAATGAAGAGGTTGGATCAAGAACAAGGCCCTGAG...CCAAACGGACTGCCACGTTACTGGAACACTGTGAAAACATACCAGTACCACACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000330194.2 ENST00000648843.3 |
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| CDS-3UTR CAA 90 bp | CTTTCACAACTAAGTGATGGAGACACGACGCTCCAGAGAGTCTGTTATTCTGGCCTCAGGGCCTTGTTCTaGATCCAACCTCTTCATTTC | + |
|
Preference number: 5 (lower is better) Translates to: LSQLSDGDTTLQRVCYSGLRALF*IQPLHF Trigger: GAAATGAAGAGGTTGGATCAAGAACAAGGCCCTGAG...GCCAGAATAACAGACTCTCTGGAGCGTCGTGTCTCCATCACTTAGTTGTGAAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000330194.2 ENST00000648843.3 |
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| CDS-3UTR CAA 90 bp | CTTTCACAACTAAGTGATGGAGACACGACGCTCCAGAGAGTCTGTTATTCTGGCTTAGCATCACTCTCCTaGTACCAAGTCCTTAGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: LSQLSDGDTTLQRVCYSGLASLS*YQVLRP Trigger: AGGCCTAAGGACTTGGTACAAGGAGAGTGATGCTAA...GCCAGAATAACAGACTCTCTGGAGCGTCGTGTCTCCATCACTTAGTTGTGAAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000330194.2 ENST00000648843.3 |
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| CDS-3UTR CAA 90 bp | TGTGGTACTGGTATGTTTTCACAGTGTTCCAGTAACGTGGCAGTCCGTTTGGGTGACAACCTCTATCACTaGCTCAGTTCCTATCACAAT | + |
|
Preference number: 5 (lower is better) Translates to: CGTGMFSQCSSNVAVRLGDNLYH*LSSYHN Trigger: ATTGTGATAGGAACTGAGCAAGTGATAGAGGTTGTC...ACCCAAACGGACTGCCACGTTACTGGAACACTGTGAAAACATACCAGTACCACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000330194.2 ENST00000648843.3 |
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| CDS-3UTR CAA 90 bp | TTTATCCTCAATAGTGTGGTACTGGTATGTTTTCACAGTGTTCCAGTAACGTGGGGGCCACATGCAGACTaGACAACCTCTATCACTTGC | + |
|
Preference number: 5 (lower is better) Translates to: FILNSVVLVCFHSVPVTWGPHAD*TTSITC Trigger: GCAAGTGATAGAGGTTGTCAAGTCTGCATGTGGCCC...CCACGTTACTGGAACACTGTGAAAACATACCAGTACCACACTATTGAGGATAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000330194.2 ENST00000648843.3 |
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| CDS-3UTR CAA 90 bp | GGTCATGTATTCTCCTGGGAGAGTAACAAGATTAGAAATAACAAATACAGTACAAGACTCCTCAGGGCCTaGTTCTTGATCCAACCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: GHVFSWESNKIRNNKYSTRLLRA*FLIQPL Trigger: AAGAGGTTGGATCAAGAACAAGGCCCTGAGGAGTCT...TGTACTGTATTTGTTATTTCTAATCTTGTTACTCTCCCAGGAGAATACATGACC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000330194.2 ENST00000648843.3 |
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| CDS-3UTR CAA 90 bp | GGTCATGTATTCTCCTGGGAGAGTAACAAGATTAGAAATAACAAATACAGTACACCAGTCCTCACTCTTTaGCGAATGTGTTGGTCCTAT | + |
|
Preference number: 5 (lower is better) Translates to: GHVFSWESNKIRNNKYSTPVLTL*RMCWSY Trigger: ATAGGACCAACACATTCGCAAAAGAGTGAGGACTGG...TGTACTGTATTTGTTATTTCTAATCTTGTTACTCTCCCAGGAGAATACATGACC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000330194.2 ENST00000648843.3 |
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| CDS-3UTR CAA 90 bp | GGTCATGTATTCTCCTGGGAGAGTAACAAGATTAGAAATAACAAATACAGTACATTAGCATCACTCTCCTaGTACCAAGTCCTTAGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: GHVFSWESNKIRNNKYSTLASLS*YQVLRP Trigger: AGGCCTAAGGACTTGGTACAAGGAGAGTGATGCTAA...TGTACTGTATTTGTTATTTCTAATCTTGTTACTCTCCCAGGAGAATACATGACC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000330194.2 ENST00000648843.3 |
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| CDS-3UTR CAA 90 bp | GGTCATGTATTCTCCTGGGAGAGTAACAAGATTAGAAATAACAAATACAGTACATATTCTCAGTTTTTCTaGAACTCCATCGATGTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: GHVFSWESNKIRNNKYSTYSQFF*NSIDVL Trigger: GAGGACATCGATGGAGTTCAAGAAAAACTGAGAATA...TGTACTGTATTTGTTATTTCTAATCTTGTTACTCTCCCAGGAGAATACATGACC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000648843.3 |
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| CDS CCA 72 bp | GGGCCAGACGTGCGGCGCCTCTTCGGAGACCGGATTTaGCTTGGCCGCAGACTCCGCGGACTGGGAATGAGC | + |
|
Preference number: 6 (lower is better) Translates to: GPDVRRLFGDRI*LGRRLRGLGMS Trigger: GCTCATTCCCAGTCCGCGGAGTCTGCGGCCAAGCCAAATCCGGTCTCCGAAGAGGCGCCGCACGTCTGGCCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330194.2 |
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| CDS CAA 72 bp | GGGGCCAGACGTGCGGCGCCTCTTCGGAGACCGGATTaGGCTTGGCCGCAGACTCCGCGGACTGGGAATGAG | + |
|
Preference number: 6 (lower is better) Translates to: GARRAAPLRRPD*AWPQTPRTGNE Trigger: CTCATTCCCAGTCCGCGGAGTCTGCGGCCAAGCCAAATCCGGTCTCCGAAGAGGCGCCGCACGTCTGGCCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330194.2 |
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| CDS CAA 90 bp | TTTTCAGCCGGGGCCAGACGTGCGGCGCCTCTTCGGAGACCGGATTaGGCTTGGCCGCAGACTCCGCGGACTGGGAATGAGCGCTCGGAG | + |
|
Preference number: 6 (lower is better) Translates to: FSAGARRAAPLRRPD*AWPQTPRTGNERSE Trigger: CTCCGAGCGCTCATTCCCAGTCCGCGGAGTCTGCGGCCAAGCCAAATCCGGTCTCCGAAGAGGCGCCGCACGTCTGGCCCCGGCTGAAAA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330194.2 |
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| CDS CCA 72 bp | AGACGTGCGGCGCCTCTTCGGAGACCGGATTTGGCTTaGCCGCAGACTCCGCGGACTGGGAATGAGCGCTCG | + |
|
Preference number: 6 (lower is better) Translates to: RRAAPLRRPDLA*PQTPRTGNERS Trigger: CGAGCGCTCATTCCCAGTCCGCGGAGTCTGCGGCCAAGCCAAATCCGGTCTCCGAAGAGGCGCCGCACGTCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330194.2 |
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| CDS GCA 72 bp | GATTCCTTCTTCCAGAGGATTTGGGAAAGGGCCACATaGAGACTTGACAACCTCTATCACTTGCTCAGTTCC | + |
|
Preference number: 6 (lower is better) Translates to: DSFFQRIWERAT*RLDNLYHLLSS Trigger: GGAACTGAGCAAGTGATAGAGGTTGTCAAGTCTGCATGTGGCCCTTTCCCAAATCCTCTGGAAGAAGGAATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000330194.2 ENST00000648843.3 |
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| CDS TCA 72 bp | CTTCCAGAGGATTTGGGAAAGGGCCACATGCAGACTTaGCAACCTCTATCACTTGCTCAGTTCCTATCACAA | + |
|
Preference number: 6 (lower is better) Translates to: LPEDLGKGHMQT*QPLSLAQFLSQ Trigger: TTGTGATAGGAACTGAGCAAGTGATAGAGGTTGTCAAGTCTGCATGTGGCCCTTTCCCAAATCCTCTGGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000330194.2 ENST00000648843.3 |
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| CDS GCA 72 bp | GCAACTGAAAGAAAATCCGGAGACAGAATCTTTTCATaGTCCTGGAATTCAGTGTCTCTCTCCGATTCGGGC | + |
|
Preference number: 6 (lower is better) Translates to: ATERKSGDRIFS*SWNSVSLSDSG Trigger: GCCCGAATCGGAGAGAGACACTGAATTCCAGGAGCATGAAAAGATTCTGTCTCCGGATTTTCTTTCAGTTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000648843.3 |
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| CDS CAA 72 bp | GTCAGTTTCTGGCTGAGACTCCTCAGGGCCTTGTTCTaGATCCAACCTCTTCATTTCCGTATCCAATATTGT | + |
|
Preference number: 6 (lower is better) Translates to: VSFWLRLLRALF*IQPLHFRIQYC Trigger: ACAATATTGGATACGGAAATGAAGAGGTTGGATCAAGAACAAGGCCCTGAGGAGTCTCAGCCAGAAACTGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000330194.2 ENST00000648843.3 |
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| CDS CCA 72 bp | AAAGATATTCCAGTCCTCACTCTTTTGCGAATGTGTTaGTCCTATTTCAGCCATAACTTCTCCAAGCCATTT | + |
|
Preference number: 6 (lower is better) Translates to: KDIPVLTLLRMC*SYFSHNFSKPF Trigger: AAATGGCTTGGAGAAGTTATGGCTGAAATAGGACCAACACATTCGCAAAAGAGTGAGGACTGGAATATCTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000330194.2 ENST00000389639.3 ENST00000648843.3 |
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