RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CAB39L (Homo sapiens)

Ensembl gene IDs: ENSG00000102547

Ensembl transcript IDs: ENST00000347776.9, ENST00000355854.8, ENST00000409082.5, ENST00000409130.5, ENST00000409308.6, ENST00000410043.5, ENST00000413278.5, ENST00000425242.5, ENST00000457041.5, ENST00000470410.1, ENST00000476943.1, ENST00000610540.4

Found 441 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGAGTACGGGTCATCAGGCTGCCGGCCGGCCTCCTGCAAGGGCACTaGCCAGGGAGGCCACAGCTGCCAAAGCGGGGAGGTGCGCCAGGC +
Preference number: 1 (lower is better)
Translates to: RVRVIRLPAGLLQGH*PGRPQLPKRGGAPG
Trigger: GCCTGGCGCACCTCCCCGCTTTGGCAGCTGTGGCCTCCCTGGCCAGTGCCCTTGCAGGAGGCCGGCCGGCAGCCTGATGACCCGTACTCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
3UTR CCA 90 bp AGAAGTTCCCCGCTGAGACTCCCTGGACCCATGGTTTGTGCCTGCTaGGCATCCCACTATGCTGATTCCTACTCTAAAAGACACTTACAG +
Preference number: 1 (lower is better)
Translates to: RSSPLRLPGPMVCAC*ASHYADSYSKRHLQ
Trigger: CTGTAAGTGTCTTTTAGAGTAGGAATCAGCATAGTGGGATGCCCAGCAGGCACAAACCATGGGTCCAGGGAGTCTCAGCGGGGAACTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
3UTR TCA 90 bp ACTGAGCTGAGAGGGAGCACTGGATCCTGGGAGGTGTGGATGCACTaGTTACAGTCCAAAGACATTGGCAGCAACAAAGGACACACAATG +
Preference number: 1 (lower is better)
Translates to: TELRGSTGSWEVWMH*LQSKDIGSNKGHTM
Trigger: CATTGTGTGTCCTTTGTTGCTGCCAATGTCTTTGGACTGTAATCAGTGCATCCACACCTCCCAGGATCCAGTGCTCCCTCTCAGCTCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409130.5
ENST00000409308.6
ENST00000610540.4
3UTR TCA 90 bp CATTTCTCCTTCCAATGGTTATTGATACTGATAGAAGTTCCCCGCTaGGACTCCCTGGACCCATGGTTTGTGCCTGCTGGGCATCCCACT +
Preference number: 1 (lower is better)
Translates to: HFSFQWLLILIEVPR*DSLDPWFVPAGHPT
Trigger: AGTGGGATGCCCAGCAGGCACAAACCATGGGTCCAGGGAGTCTCAGCGGGGAACTTCTATCAGTATCAATAACCATTGGAAGGAGAAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
3UTR TCA 90 bp ATGACTGAAAACATTAACGTTACCTTCTGGGATCTCTCAGTGCCCTaGGCGATCTGTGTGTCTACCTACAGATGGGCAAAGCATTTTTGC +
Preference number: 1 (lower is better)
Translates to: MTENINVTFWDLSVP*AICVSTYRWAKHFC
Trigger: GCAAAAATGCTTTGCCCATCTGTAGGTAGACACACAGATCGCTCAGGGCACTGAGAGATCCCAGAAGGTAACGTTAATGTTTTCAGTCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409130.5
ENST00000409308.6
ENST00000610540.4
3UTR TCA 90 bp ACTGATTACAGTCCAAAGACATTGGCAGCAACAAAGGACACACAATaGCTGAAAACATTAACGTTACCTTCTGGGATCTCTCAGTGCCCT +
Preference number: 1 (lower is better)
Translates to: TDYSPKTLAATKDTQ*LKTLTLPSGISQCP
Trigger: AGGGCACTGAGAGATCCCAGAAGGTAACGTTAATGTTTTCAGTCATTGTGTGTCCTTTGTTGCTGCCAATGTCTTTGGACTGTAATCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409130.5
ENST00000409308.6
ENST00000610540.4
3UTR TCA 90 bp AATAGGCACCTCCAAAGTCTTCCCAAGAATGATGACTTTCTGAAATaGCACACTGTACAAACTGGACAAATGAGACGACTGACTGTGACA +
Preference number: 1 (lower is better)
Translates to: NRHLQSLPKNDDFLK*HTVQTGQMRRLTVT
Trigger: TGTCACAGTCAGTCGTCTCATTTGTCCAGTTTGTACAGTGTGTCATTTCAGAAAGTCATCATTCTTGGGAAGACTTTGGAGGTGCCTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409130.5
ENST00000409308.6
ENST00000410043.5
ENST00000425242.5
ENST00000610540.4
3UTR-3UTR CCA 90 bp GGTCATCAGGCTGCCGGCCGGCCTCCTGCAAGGGCACTGGCCAGGGAGGCCACAGCTGAGAGGGAGCACTaGATCCTGGGAGGTGTGGAT +
Preference number: 2 (lower is better)
Translates to: GHQAAGRPPARALAREATAEREH*ILGGVD
Trigger: ATCCACACCTCCCAGGATCCAGTGCTCCCTCTCAGC...TGTGGCCTCCCTGGCCAGTGCCCTTGCAGGAGGCCGGCCGGCAGCCTGATGACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
3UTR-3UTR CCA 90 bp AGTACGGGTCATCAGGCTGCCGGCCGGCCTCCTGCAAGGGCACTGGCCAGGGAGCCCGCTGAGACTCCCTaGACCCATGGTTTGTGCCTG +
Preference number: 2 (lower is better)
Translates to: STGHQAAGRPPARALAREPAETP*THGLCL
Trigger: CAGGCACAAACCATGGGTCCAGGGAGTCTCAGCGGG...CTCCCTGGCCAGTGCCCTTGCAGGAGGCCGGCCGGCAGCCTGATGACCCGTACT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
3UTR-3UTR TCA 90 bp AGTACGGGTCATCAGGCTGCCGGCCGGCCTCCTGCAAGGGCACTGGCCAGGGAGCCCCGTGACCCTTGTTaGTCCATCCTCTTCCTGCTC +
Preference number: 2 (lower is better)
Translates to: STGHQAAGRPPARALAREPRDPC*SILFLL
Trigger: GAGCAGGAAGAGGATGGATCAACAAGGGTCACGGGG...CTCCCTGGCCAGTGCCCTTGCAGGAGGCCGGCCGGCAGCCTGATGACCCGTACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
3UTR-3UTR TCA 90 bp AGTACGGGTCATCAGGCTGCCGGCCGGCCTCCTGCAAGGGCACTGGCCAGGGAGATAGAAGTTCCCCGCTaGGACTCCCTGGACCCATGG +
Preference number: 2 (lower is better)
Translates to: STGHQAAGRPPARALAREIEVPR*DSLDPW
Trigger: CCATGGGTCCAGGGAGTCTCAGCGGGGAACTTCTAT...CTCCCTGGCCAGTGCCCTTGCAGGAGGCCGGCCGGCAGCCTGATGACCCGTACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
3UTR-3UTR GCA 90 bp GGTCATCAGGCTGCCGGCCGGCCTCCTGCAAGGGCACTGGCCAGGGAGGCCACATGGGCAAAGCATTTTTaGACCCTGGCCCCATTCCCA +
Preference number: 2 (lower is better)
Translates to: GHQAAGRPPARALAREATWAKHF*TLAPFP
Trigger: TGGGAATGGGGCCAGGGTGCAAAAATGCTTTGCCCA...TGTGGCCTCCCTGGCCAGTGCCCTTGCAGGAGGCCGGCCGGCAGCCTGATGACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
3UTR-3UTR GCA 90 bp AGTACGGGTCATCAGGCTGCCGGCCGGCCTCCTGCAAGGGCACTGGCCAGGGAGTGGACCCATGGTTTGTaGCTGCTGGGCATCCCACTA +
Preference number: 2 (lower is better)
Translates to: STGHQAAGRPPARALAREWTHGL*LLGIPL
Trigger: TAGTGGGATGCCCAGCAGGCACAAACCATGGGTCCA...CTCCCTGGCCAGTGCCCTTGCAGGAGGCCGGCCGGCAGCCTGATGACCCGTACT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
3UTR-3UTR GCA 90 bp GGCCCCACATCACCTGCCTCGGGGTCCATGCCAGGCAAGAAAGAAACACACACCGCTCAGTTGCTCCCCTaGTCACCTGGACTGCGGGAG +
Preference number: 2 (lower is better)
Translates to: GPTSPASGSMPGKKETHTAQLLP*SPGLRE
Trigger: CTCCCGCAGTCCAGGTGAGCAGGGGAGCAACTGAGC...GGTGTGTGTTTCTTTCTTGCCTGGCATGGACCCCGAGGCAGGTGATGTGGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
3UTR-3UTR GCA 90 bp GGCCCCACATCACCTGCCTCGGGGTCCATGCCAGGCAAGAAAGAAACACACACCGGAGCTGGGATGGAATaGAGGACAGGGAGAGAGGGG +
Preference number: 2 (lower is better)
Translates to: GPTSPASGSMPGKKETHTGAGME*RTGREG
Trigger: CCCCTCTCTCCCTGTCCTGCATTCCATCCCAGCTCC...GGTGTGTGTTTCTTTCTTGCCTGGCATGGACCCCGAGGCAGGTGATGTGGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
3UTR-3UTR GCA 90 bp CACATCACCTGCCTCGGGGTCCATGCCAGGCAAGAAAGAAACACACACCTGGGCGCTCAGTTGCTCCCCTaGTCACCTGGACTGCGGGAG +
Preference number: 2 (lower is better)
Translates to: HITCLGVHARQERNTHLGAQLLP*SPGLRE
Trigger: CTCCCGCAGTCCAGGTGAGCAGGGGAGCAACTGAGC...GCCCAGGTGTGTGTTTCTTTCTTGCCTGGCATGGACCCCGAGGCAGGTGATGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
3UTR-3UTR CCA 90 bp GGTCATCAGGCTGCCGGCCGGCCTCCTGCAAGGGCACTGGCCAGGGAGGCCACAAAAGGGGATCAGTCCTaGAGAACACATTTCTCTTCC +
Preference number: 2 (lower is better)
Translates to: GHQAAGRPPARALAREATKGDQS*RTHFSS
Trigger: GGAAGAGAAATGTGTTCTCCAGGACTGATCCCCTTT...TGTGGCCTCCCTGGCCAGTGCCCTTGCAGGAGGCCGGCCGGCAGCCTGATGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
3UTR-3UTR GCA 90 bp CACATCACCTGCCTCGGGGTCCATGCCAGGCAAGAAAGAAACACACACCTGGGCGGAGCTGGGATGGAATaGAGGACAGGGAGAGAGGGG +
Preference number: 2 (lower is better)
Translates to: HITCLGVHARQERNTHLGGAGME*RTGREG
Trigger: CCCCTCTCTCCCTGTCCTGCATTCCATCCCAGCTCC...GCCCAGGTGTGTGTTTCTTTCTTGCCTGGCATGGACCCCGAGGCAGGTGATGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
3UTR-3UTR CCA 90 bp AGTACGGGTCATCAGGCTGCCGGCCGGCCTCCTGCAAGGGCACTGGCCAGGGAGACAGTCCAAAGACATTaGCAGCAACAAAGGACACAC +
Preference number: 2 (lower is better)
Translates to: STGHQAAGRPPARALARETVQRH*QQQRTH
Trigger: GTGTGTCCTTTGTTGCTGCCAATGTCTTTGGACTGT...CTCCCTGGCCAGTGCCCTTGCAGGAGGCCGGCCGGCAGCCTGATGACCCGTACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
3UTR-3UTR CCA 90 bp GGCCCCACATCACCTGCCTCGGGGTCCATGCCAGGCAAGAAAGAAACACACACCGACTCCCTGGACCCATaGTTTGTGCCTGCTGGGCAT +
Preference number: 2 (lower is better)
Translates to: GPTSPASGSMPGKKETHTDSLDP*FVPAGH
Trigger: ATGCCCAGCAGGCACAAACCATGGGTCCAGGGAGTC...GGTGTGTGTTTCTTTCTTGCCTGGCATGGACCCCGAGGCAGGTGATGTGGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
3UTR-3UTR TCA 90 bp AGTACGGGTCATCAGGCTGCCGGCCGGCCTCCTGCAAGGGCACTGGCCAGGGAGAGAGAAATACCTGGCTaGAGAAAAACTACACAACAC +
Preference number: 2 (lower is better)
Translates to: STGHQAAGRPPARALAREREIPG*RKTTQH
Trigger: GTGTTGTGTAGTTTTTCTTCAGCCAGGTATTTCTCT...CTCCCTGGCCAGTGCCCTTGCAGGAGGCCGGCCGGCAGCCTGATGACCCGTACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
3UTR-3UTR GCA 90 bp TCACTCTATCCAGAGCCACATGTTCACAGTTCTCTAGCAAGCAGGTCACACCCCGCTCAGTTGCTCCCCTaGTCACCTGGACTGCGGGAG +
Preference number: 2 (lower is better)
Translates to: SLYPEPHVHSSLASRSHPAQLLP*SPGLRE
Trigger: CTCCCGCAGTCCAGGTGAGCAGGGGAGCAACTGAGC...GGGGTGTGACCTGCTTGCTAGAGAACTGTGAACATGTGGCTCTGGATAGAGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
3UTR-3UTR TCA 90 bp AGTTCCCCGCTGAGACTCCCTGGACCCATGGTTTGTGCCTGCTGGGCATCCCACGAGGTGTGGATGCACTaGTTACAGTCCAAAGACATT +
Preference number: 2 (lower is better)
Translates to: SSPLRLPGPMVCACWASHEVWMH*LQSKDI
Trigger: AATGTCTTTGGACTGTAATCAGTGCATCCACACCTC...GTGGGATGCCCAGCAGGCACAAACCATGGGTCCAGGGAGTCTCAGCGGGGAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
3UTR-3UTR CCA 90 bp AGTTCCCCGCTGAGACTCCCTGGACCCATGGTTTGTGCCTGCTGGGCATCCCACACACACTGTACAAACTaGACAAATGAGACGACTGAC +
Preference number: 2 (lower is better)
Translates to: SSPLRLPGPMVCACWASHTHCTN*TNETTD
Trigger: GTCAGTCGTCTCATTTGTCCAGTTTGTACAGTGTGT...GTGGGATGCCCAGCAGGCACAAACCATGGGTCCAGGGAGTCTCAGCGGGGAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
3UTR-3UTR CCA 90 bp GGCCTCACTCTCCAAAGGAAAACAGACGTCCCAAGATGTTGTGGAACAGTATTACTCCTGCAAGGGCACTaGCCAGGGAGGCCACAGCTG +
Preference number: 2 (lower is better)
Translates to: GLTLQRKTDVPRCCGTVLLLQGH*PGRPQL
Trigger: CAGCTGTGGCCTCCCTGGCCAGTGCCCTTGCAGGAG...TAATACTGTTCCACAACATCTTGGGACGTCTGTTTTCCTTTGGAGAGTGAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
3UTR-3UTR TCA 90 bp TCACTCTATCCAGAGCCACATGTTCACAGTTCTCTAGCAAGCAGGTCACACCCCGTCCCCTATTCCCCGTaGCCCTTGTTGATCCATCCT +
Preference number: 2 (lower is better)
Translates to: SLYPEPHVHSSLASRSHPVPYSP*PLLIHP
Trigger: AGGATGGATCAACAAGGGTCACGGGGAATAGGGGAC...GGGGTGTGACCTGCTTGCTAGAGAACTGTGAACATGTGGCTCTGGATAGAGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
3UTR-3UTR GCA 90 bp GGCCTCACTCTCCAAAGGAAAACAGACGTCCCAAGATGTTGTGGAACAGTATTAGCTCAGTTGCTCCCCTaGTCACCTGGACTGCGGGAG +
Preference number: 2 (lower is better)
Translates to: GLTLQRKTDVPRCCGTVLAQLLP*SPGLRE
Trigger: CTCCCGCAGTCCAGGTGAGCAGGGGAGCAACTGAGC...TAATACTGTTCCACAACATCTTGGGACGTCTGTTTTCCTTTGGAGAGTGAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
3UTR-3UTR GCA 90 bp CTCACAGTATTTACAGTGAACTTTGTGCAAACAAATCCCCCTTTGTGCAAAGGGTACGGGTCATCAGGCTaGCGGCCGGCCTCCTGCAAG +
Preference number: 2 (lower is better)
Translates to: LTVFTVNFVQTNPPLCKGYGSSG*RPASCK
Trigger: CTTGCAGGAGGCCGGCCGGCAGCCTGATGACCCGTA...CCCTTTGCACAAAGGGGGATTTGTTTGCACAAAGTTCACTGTAAATACTGTGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
3UTR-3UTR TCA 90 bp TACCTTCTGGGATCTCTCAGTGCCCTGAGCGATCTGTGTGTCTACCTACAGATGGAACTCAGTCCTCCTTaGAGACTTGGTGATGCCTGT +
Preference number: 2 (lower is better)
Translates to: YLLGSLSALSDLCVYLQMELSPP*RLGDAC
Trigger: ACAGGCATCACCAAGTCTTCAAGGAGGACTGAGTTC...CATCTGTAGGTAGACACACAGATCGCTCAGGGCACTGAGAGATCCCAGAAGGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409130.5
ENST00000409308.6
ENST00000610540.4
3UTR-3UTR GCA 90 bp ACATTAACGTTACCTTCTGGGATCTCTCAGTGCCCTGAGCGATCTGTGTGTCTATTTAGCGGCTCATTGTaGCCAGGGGCTCACATCTGC +
Preference number: 2 (lower is better)
Translates to: TLTLPSGISQCPERSVCLFSGSL*PGAHIC
Trigger: GCAGATGTGAGCCCCTGGGCACAATGAGCCGCTAAA...TAGACACACAGATCGCTCAGGGCACTGAGAGATCCCAGAAGGTAACGTTAATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409130.5
ENST00000409308.6
ENST00000610540.4
3UTR-3UTR TCA 90 bp TTACCTTCTGGGATCTCTCAGTGCCCTGAGCGATCTGTGTGTCTACCTACAGATGAACTCAGTCCTCCTTaGAGACTTGGTGATGCCTGT +
Preference number: 2 (lower is better)
Translates to: LPSGISQCPERSVCLPTDELSPP*RLGDAC
Trigger: ACAGGCATCACCAAGTCTTCAAGGAGGACTGAGTTC...ATCTGTAGGTAGACACACAGATCGCTCAGGGCACTGAGAGATCCCAGAAGGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409130.5
ENST00000409308.6
ENST00000610540.4
3UTR-3UTR CCA 90 bp ACATTAACGTTACCTTCTGGGATCTCTCAGTGCCCTGAGCGATCTGTGTGTCTAAGCATTTTTGCACCCTaGCCCCATTCCCAGTTCTCC +
Preference number: 2 (lower is better)
Translates to: TLTLPSGISQCPERSVCLSIFAP*PHSQFS
Trigger: GGAGAACTGGGAATGGGGCCAGGGTGCAAAAATGCT...TAGACACACAGATCGCTCAGGGCACTGAGAGATCCCAGAAGGTAACGTTAATGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409130.5
ENST00000409308.6
ENST00000610540.4
3UTR-3UTR CCA 90 bp AAGCATTCACCCATGACCATTATGAAGGAAATATTCTGTCCCTCACTCACCCTCGCCATGCTGAGGAGCTaGGATGGAATGCAGGACAGG +
Preference number: 2 (lower is better)
Translates to: KHSPMTIMKEIFCPSLTLAMLRS*DGMQDR
Trigger: CCTGTCCTGCATTCCATCCCAGCTCCTCAGCATGGC...GAGGGTGAGTGAGGGACAGAATATTTCCTTCATAATGGTCATGGGTGAATGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
3UTR-3UTR TCA 90 bp CTCACAGTATTTACAGTGAACTTTGTGCAAACAAATCCCCCTTTGTGCAAAGGGCCCCGTGACCCTTGTTaGTCCATCCTCTTCCTGCTC +
Preference number: 2 (lower is better)
Translates to: LTVFTVNFVQTNPPLCKGPRDPC*SILFLL
Trigger: GAGCAGGAAGAGGATGGATCAACAAGGGTCACGGGG...CCCTTTGCACAAAGGGGGATTTGTTTGCACAAAGTTCACTGTAAATACTGTGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
3UTR-3UTR TCA 90 bp AAGCATTCACCCATGACCATTATGAAGGAAATATTCTGTCCCTCACTCACCCTCGTCCCCTATTCCCCGTaGCCCTTGTTGATCCATCCT +
Preference number: 2 (lower is better)
Translates to: KHSPMTIMKEIFCPSLTLVPYSP*PLLIHP
Trigger: AGGATGGATCAACAAGGGTCACGGGGAATAGGGGAC...GAGGGTGAGTGAGGGACAGAATATTTCCTTCATAATGGTCATGGGTGAATGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
3UTR-3UTR CCA 90 bp CTCACAGTATTTACAGTGAACTTTGTGCAAACAAATCCCCCTTTGTGCAAAGGGGACTCCCTGGACCCATaGTTTGTGCCTGCTGGGCAT +
Preference number: 2 (lower is better)
Translates to: LTVFTVNFVQTNPPLCKGDSLDP*FVPAGH
Trigger: ATGCCCAGCAGGCACAAACCATGGGTCCAGGGAGTC...CCCTTTGCACAAAGGGGGATTTGTTTGCACAAAGTTCACTGTAAATACTGTGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
3UTR-3UTR TCA 90 bp GGCCTCACTCTCCAAAGGAAAACAGACGTCCCAAGATGTTGTGGAACAGTATTAGAACTCAGTCCTCCTTaGAGACTTGGTGATGCCTGT +
Preference number: 2 (lower is better)
Translates to: GLTLQRKTDVPRCCGTVLELSPP*RLGDAC
Trigger: ACAGGCATCACCAAGTCTTCAAGGAGGACTGAGTTC...TAATACTGTTCCACAACATCTTGGGACGTCTGTTTTCCTTTGGAGAGTGAGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
3UTR-3UTR TCA 90 bp CTCACAGTATTTACAGTGAACTTTGTGCAAACAAATCCCCCTTTGTGCAAAGGGGATCTCTCAGTGCCCTaGGCGATCTGTGTGTCTACC +
Preference number: 2 (lower is better)
Translates to: LTVFTVNFVQTNPPLCKGDLSVP*AICVST
Trigger: GGTAGACACACAGATCGCTCAGGGCACTGAGAGATC...CCCTTTGCACAAAGGGGGATTTGTTTGCACAAAGTTCACTGTAAATACTGTGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
3UTR-3UTR GCA 90 bp GGCCTCACTCTCCAAAGGAAAACAGACGTCCCAAGATGTTGTGGAACAGTATTACCTGGGAGGTGTGGATaGACTGATTACAGTCCAAAG +
Preference number: 2 (lower is better)
Translates to: GLTLQRKTDVPRCCGTVLPGRCG*TDYSPK
Trigger: CTTTGGACTGTAATCAGTGCATCCACACCTCCCAGG...TAATACTGTTCCACAACATCTTGGGACGTCTGTTTTCCTTTGGAGAGTGAGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
3UTR-3UTR GCA 90 bp CTCACAGTATTTACAGTGAACTTTGTGCAAACAAATCCCCCTTTGTGCAAAGGGTGGACCCATGGTTTGTaGCTGCTGGGCATCCCACTA +
Preference number: 2 (lower is better)
Translates to: LTVFTVNFVQTNPPLCKGWTHGL*LLGIPL
Trigger: TAGTGGGATGCCCAGCAGGCACAAACCATGGGTCCA...CCCTTTGCACAAAGGGGGATTTGTTTGCACAAAGTTCACTGTAAATACTGTGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
3UTR-3UTR CCA 90 bp ACTTACAGCAGAAAGCATTCACCCATGACCATTATGAAGGAAATATTCTGTCCCGCTGAGAGGGAGCACTaGATCCTGGGAGGTGTGGAT +
Preference number: 2 (lower is better)
Translates to: TYSRKHSPMTIMKEIFCPAEREH*ILGGVD
Trigger: ATCCACACCTCCCAGGATCCAGTGCTCCCTCTCAGC...GGGACAGAATATTTCCTTCATAATGGTCATGGGTGAATGCTTTCTGCTGTAAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
3UTR-3UTR GCA 90 bp ACTTACAGCAGAAAGCATTCACCCATGACCATTATGAAGGAAATATTCTGTCCCTTTAGCGGCTCATTGTaGCCAGGGGCTCACATCTGC +
Preference number: 2 (lower is better)
Translates to: TYSRKHSPMTIMKEIFCPFSGSL*PGAHIC
Trigger: GCAGATGTGAGCCCCTGGGCACAATGAGCCGCTAAA...GGGACAGAATATTTCCTTCATAATGGTCATGGGTGAATGCTTTCTGCTGTAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
3UTR-3UTR GCA 90 bp CTCACAGTATTTACAGTGAACTTTGTGCAAACAAATCCCCCTTTGTGCAAAGGGTCTGGGATCTCTCAGTaGCCTGAGCGATCTGTGTGT +
Preference number: 2 (lower is better)
Translates to: LTVFTVNFVQTNPPLCKGSGISQ*PERSVC
Trigger: ACACACAGATCGCTCAGGGCACTGAGAGATCCCAGA...CCCTTTGCACAAAGGGGGATTTGTTTGCACAAAGTTCACTGTAAATACTGTGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
3UTR-3UTR GCA 90 bp TACTCTAAAAGACACTTACAGCAGAAAGCATTCACCCATGACCATTATGAAGGATTTAGCGGCTCATTGTaGCCAGGGGCTCACATCTGC +
Preference number: 2 (lower is better)
Translates to: YSKRHLQQKAFTHDHYEGFSGSL*PGAHIC
Trigger: GCAGATGTGAGCCCCTGGGCACAATGAGCCGCTAAA...TCCTTCATAATGGTCATGGGTGAATGCTTTCTGCTGTAAGTGTCTTTTAGAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
3UTR-3UTR CCA 90 bp ACATTAACGTTACCTTCTGGGATCTCTCAGTGCCCTGAGCGATCTGTGTGTCTAACACACTGTACAAACTaGACAAATGAGACGACTGAC +
Preference number: 2 (lower is better)
Translates to: TLTLPSGISQCPERSVCLTHCTN*TNETTD
Trigger: GTCAGTCGTCTCATTTGTCCAGTTTGTACAGTGTGT...TAGACACACAGATCGCTCAGGGCACTGAGAGATCCCAGAAGGTAACGTTAATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409130.5
ENST00000409308.6
ENST00000610540.4
3UTR-3UTR TCA 90 bp TCTCTTCCCCTCTCTAGGCAGAGAAATACCTGGCTGAAGAAAAACTACACAACACCCGTTTTAGATGGTTaGTGTCTGAAACGAAACCAC +
Preference number: 2 (lower is better)
Translates to: SLPLSRQRNTWLKKNYTTPVLDG*CLKRNH
Trigger: GTGGTTTCGTTTCAGACATCAACCATCTAAAACGGG...TGTTGTGTAGTTTTTCTTCAGCCAGGTATTTCTCTGCCTAGAGAGGGGAAGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
3UTR-3UTR CCA 90 bp TACTCTAAAAGACACTTACAGCAGAAAGCATTCACCCATGACCATTATGAAGGAAGCATTTTTGCACCCTaGCCCCATTCCCAGTTCTCC +
Preference number: 2 (lower is better)
Translates to: YSKRHLQQKAFTHDHYEGSIFAP*PHSQFS
Trigger: GGAGAACTGGGAATGGGGCCAGGGTGCAAAAATGCT...TCCTTCATAATGGTCATGGGTGAATGCTTTCTGCTGTAAGTGTCTTTTAGAGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
3UTR-3UTR CCA 90 bp TACTCTAAAAGACACTTACAGCAGAAAGCATTCACCCATGACCATTATGAAGGAACAGTCCAAAGACATTaGCAGCAACAAAGGACACAC +
Preference number: 2 (lower is better)
Translates to: YSKRHLQQKAFTHDHYEGTVQRH*QQQRTH
Trigger: GTGTGTCCTTTGTTGCTGCCAATGTCTTTGGACTGT...TCCTTCATAATGGTCATGGGTGAATGCTTTCTGCTGTAAGTGTCTTTTAGAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
3UTR-3UTR CCA 90 bp TACTCTAAAAGACACTTACAGCAGAAAGCATTCACCCATGACCATTATGAAGGAACACACTGTACAAACTaGACAAATGAGACGACTGAC +
Preference number: 2 (lower is better)
Translates to: YSKRHLQQKAFTHDHYEGTHCTN*TNETTD
Trigger: GTCAGTCGTCTCATTTGTCCAGTTTGTACAGTGTGT...TCCTTCATAATGGTCATGGGTGAATGCTTTCTGCTGTAAGTGTCTTTTAGAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
3UTR CCA 72 bp GTCATCAGGCTGCCGGCCGGCCTCCTGCAAGGGCACTaGCCAGGGAGGCCACAGCTGCCAAAGCGGGGAGGT +
Preference number: 3 (lower is better)
Translates to: VIRLPAGLLQGH*PGRPQLPKRGG
Trigger: ACCTCCCCGCTTTGGCAGCTGTGGCCTCCCTGGCCAGTGCCCTTGCAGGAGGCCGGCCGGCAGCCTGATGAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
3UTR-3UTR CAA 90 bp GGTCATCAGGCTGCCGGCCGGCCTCCTGCAAGGGCACTGGCCAGGGAGGCCACAGGTGATGCCTGTCAATaGAGCTCCCATTTAGCGGCT +
Preference number: 3 (lower is better)
Translates to: GHQAAGRPPARALAREATGDACQ*SSHLAA
Trigger: AGCCGCTAAATGGGAGCTCAATTGACAGGCATCACC...TGTGGCCTCCCTGGCCAGTGCCCTTGCAGGAGGCCGGCCGGCAGCCTGATGACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
3UTR-3UTR CAA 90 bp AGTACGGGTCATCAGGCTGCCGGCCGGCCTCCTGCAAGGGCACTGGCCAGGGAGTCCTTCCAATGGTTATaGATACTGATAGAAGTTCCC +
Preference number: 3 (lower is better)
Translates to: STGHQAAGRPPARALARESFQWL*ILIEVP
Trigger: GGGAACTTCTATCAGTATCAATAACCATTGGAAGGA...CTCCCTGGCCAGTGCCCTTGCAGGAGGCCGGCCGGCAGCCTGATGACCCGTACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
3UTR CCA 72 bp CCGCTGAGACTCCCTGGACCCATGGTTTGTGCCTGCTaGGCATCCCACTATGCTGATTCCTACTCTAAAAGA +
Preference number: 3 (lower is better)
Translates to: PLRLPGPMVCAC*ASHYADSYSKR
Trigger: TCTTTTAGAGTAGGAATCAGCATAGTGGGATGCCCAGCAGGCACAAACCATGGGTCCAGGGAGTCTCAGCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
3UTR-3UTR CAA 90 bp TTACCTTCTGGGATCTCTCAGTGCCCTGAGCGATCTGTGTGTCTACCTACAGATCCATTTAGCGGCTCATaGTGCCCAGGGGCTCACATC +
Preference number: 3 (lower is better)
Translates to: LPSGISQCPERSVCLPTDPFSGS*CPGAHI
Trigger: GATGTGAGCCCCTGGGCACAATGAGCCGCTAAATGG...ATCTGTAGGTAGACACACAGATCGCTCAGGGCACTGAGAGATCCCAGAAGGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409130.5
ENST00000409308.6
ENST00000610540.4
3UTR-3UTR CAA 90 bp TCACTCTATCCAGAGCCACATGTTCACAGTTCTCTAGCAAGCAGGTCACACCCCATGGGCAAAGCATTTTaGCACCCTGGCCCCATTCCC +
Preference number: 3 (lower is better)
Translates to: SLYPEPHVHSSLASRSHPMGKAF*HPGPIP
Trigger: GGGAATGGGGCCAGGGTGCAAAAATGCTTTGCCCAT...GGGGTGTGACCTGCTTGCTAGAGAACTGTGAACATGTGGCTCTGGATAGAGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
3UTR-3UTR CAA 90 bp CTCACAGTATTTACAGTGAACTTTGTGCAAACAAATCCCCCTTTGTGCAAAGGGCCCTGGACCCATGGTTaGTGCCTGCTGGGCATCCCA +
Preference number: 3 (lower is better)
Translates to: LTVFTVNFVQTNPPLCKGPWTHG*CLLGIP
Trigger: TGGGATGCCCAGCAGGCACAAACCATGGGTCCAGGG...CCCTTTGCACAAAGGGGGATTTGTTTGCACAAAGTTCACTGTAAATACTGTGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
3UTR-3UTR CAA 90 bp CACATCACCTGCCTCGGGGTCCATGCCAGGCAAGAAAGAAACACACACCTGGGCTCCTTCCAATGGTTATaGATACTGATAGAAGTTCCC +
Preference number: 3 (lower is better)
Translates to: HITCLGVHARQERNTHLGSFQWL*ILIEVP
Trigger: GGGAACTTCTATCAGTATCAATAACCATTGGAAGGA...GCCCAGGTGTGTGTTTCTTTCTTGCCTGGCATGGACCCCGAGGCAGGTGATGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
3UTR TCA 72 bp AGAGGGAGCACTGGATCCTGGGAGGTGTGGATGCACTaGTTACAGTCCAAAGACATTGGCAGCAACAAAGGA +
Preference number: 3 (lower is better)
Translates to: RGSTGSWEVWMH*LQSKDIGSNKG
Trigger: TCCTTTGTTGCTGCCAATGTCTTTGGACTGTAATCAGTGCATCCACACCTCCCAGGATCCAGTGCTCCCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409130.5
ENST00000409308.6
ENST00000610540.4
3UTR TCA 72 bp TTCCAATGGTTATTGATACTGATAGAAGTTCCCCGCTaGGACTCCCTGGACCCATGGTTTGTGCCTGCTGGG +
Preference number: 3 (lower is better)
Translates to: FQWLLILIEVPR*DSLDPWFVPAG
Trigger: CCCAGCAGGCACAAACCATGGGTCCAGGGAGTCTCAGCGGGGAACTTCTATCAGTATCAATAACCATTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
3UTR TCA 72 bp AACATTAACGTTACCTTCTGGGATCTCTCAGTGCCCTaGGCGATCTGTGTGTCTACCTACAGATGGGCAAAG +
Preference number: 3 (lower is better)
Translates to: NINVTFWDLSVP*AICVSTYRWAK
Trigger: CTTTGCCCATCTGTAGGTAGACACACAGATCGCTCAGGGCACTGAGAGATCCCAGAAGGTAACGTTAATGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409130.5
ENST00000409308.6
ENST00000610540.4
3UTR GCA 72 bp TGCCTGTCAATTGAGCTCCCATTTAGCGGCTCATTGTaGCCAGGGGCTCACATCTGCAAGTTAAAATTGCTT +
Preference number: 3 (lower is better)
Translates to: CLSIELPFSGSL*PGAHICKLKLL
Trigger: AAGCAATTTTAACTTGCAGATGTGAGCCCCTGGGCACAATGAGCCGCTAAATGGGAGCTCAATTGACAGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409130.5
ENST00000409308.6
ENST00000610540.4
3UTR-3UTR CAA 90 bp ACTTACAGCAGAAAGCATTCACCCATGACCATTATGAAGGAAATATTCTGTCCCCCATTTAGCGGCTCATaGTGCCCAGGGGCTCACATC +
Preference number: 3 (lower is better)
Translates to: TYSRKHSPMTIMKEIFCPPFSGS*CPGAHI
Trigger: GATGTGAGCCCCTGGGCACAATGAGCCGCTAAATGG...GGGACAGAATATTTCCTTCATAATGGTCATGGGTGAATGCTTTCTGCTGTAAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
3UTR-3UTR CAA 90 bp ACTTACAGCAGAAAGCATTCACCCATGACCATTATGAAGGAAATATTCTGTCCCGGTGATGCCTGTCAATaGAGCTCCCATTTAGCGGCT +
Preference number: 3 (lower is better)
Translates to: TYSRKHSPMTIMKEIFCPGDACQ*SSHLAA
Trigger: AGCCGCTAAATGGGAGCTCAATTGACAGGCATCACC...GGGACAGAATATTTCCTTCATAATGGTCATGGGTGAATGCTTTCTGCTGTAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
3UTR-3UTR CAA 90 bp CTCACAGTATTTACAGTGAACTTTGTGCAAACAAATCCCCCTTTGTGCAAAGGGTCCCGTTTTAGATGGTaGATGTCTGAAACGAAACCA +
Preference number: 3 (lower is better)
Translates to: LTVFTVNFVQTNPPLCKGSRFRW*MSETKP
Trigger: TGGTTTCGTTTCAGACATCAACCATCTAAAACGGGA...CCCTTTGCACAAAGGGGGATTTGTTTGCACAAAGTTCACTGTAAATACTGTGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
3UTR TCA 72 bp CTCCAAAGTCTTCCCAAGAATGATGACTTTCTGAAATaGCACACTGTACAAACTGGACAAATGAGACGACTG +
Preference number: 3 (lower is better)
Translates to: LQSLPKNDDFLK*HTVQTGQMRRL
Trigger: CAGTCGTCTCATTTGTCCAGTTTGTACAGTGTGTCATTTCAGAAAGTCATCATTCTTGGGAAGACTTTGGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409130.5
ENST00000409308.6
ENST00000410043.5
ENST00000425242.5
ENST00000610540.4
3UTR TCA 72 bp AGTCCAAAGACATTGGCAGCAACAAAGGACACACAATaGCTGAAAACATTAACGTTACCTTCTGGGATCTCT +
Preference number: 3 (lower is better)
Translates to: SPKTLAATKDTQ*LKTLTLPSGIS
Trigger: AGAGATCCCAGAAGGTAACGTTAATGTTTTCAGTCATTGTGTGTCCTTTGTTGCTGCCAATGTCTTTGGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409130.5
ENST00000409308.6
ENST00000610540.4
CDS-3UTR CCA 90 bp AGTACGGGTCATCAGGCTGCCGGCCGGCCTCCTGCAAGGGCACTGGCCAGGGAGGACTCCCTGGACCCATaGTTTGTGCCTGCTGGGCAT +
Preference number: 4 (lower is better)
Translates to: STGHQAAGRPPARALAREDSLDP*FVPAGH
Trigger: ATGCCCAGCAGGCACAAACCATGGGTCCAGGGAGTC...CTCCCTGGCCAGTGCCCTTGCAGGAGGCCGGCCGGCAGCCTGATGACCCGTACT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR TCA 90 bp GGTCATCAGGCTGCCGGCCGGCCTCCTGCAAGGGCACTGGCCAGGGAGGCCACAAGTTCTTGTGCTAGCTaGGCCACTGCTTCTGTTGGG +
Preference number: 4 (lower is better)
Translates to: GHQAAGRPPARALAREATSSCAS*ATASVG
Trigger: CCCAACAGAAGCAGTGGCTCAGCTAGCACAAGAACT...TGTGGCCTCCCTGGCCAGTGCCCTTGCAGGAGGCCGGCCGGCAGCCTGATGACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR TCA 90 bp AGTTCCCCGCTGAGACTCCCTGGACCCATGGTTTGTGCCTGCTGGGCATCCCACGCGCCACCACTCCAGTaGTGCCGGCCTCTCGACTAC +
Preference number: 4 (lower is better)
Translates to: SSPLRLPGPMVCACWASHAPPLQ*CRPLDY
Trigger: GTAGTCGAGAGGCCGGCATCACTGGAGTGGTGGCGC...GTGGGATGCCCAGCAGGCACAAACCATGGGTCCAGGGAGTCTCAGCGGGGAACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409308.6
CDS-3UTR GCA 90 bp AGTACGGGTCATCAGGCTGCCGGCCGGCCTCCTGCAAGGGCACTGGCCAGGGAGCTGCCTCGGGGTCCATaGCAGGCAAGAAAGAAACAC +
Preference number: 4 (lower is better)
Translates to: STGHQAAGRPPARALARELPRGP*QARKKH
Trigger: GTGTTTCTTTCTTGCCTGGCATGGACCCCGAGGCAG...CTCCCTGGCCAGTGCCCTTGCAGGAGGCCGGCCGGCAGCCTGATGACCCGTACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR GCA 90 bp GGCCCCACATCACCTGCCTCGGGGTCCATGCCAGGCAAGAAAGAAACACACACCGCCAAAGCGGGGAGGTaGGCCAGGCCCCACATCACC +
Preference number: 4 (lower is better)
Translates to: GPTSPASGSMPGKKETHTAKAGR*ARPHIT
Trigger: GGTGATGTGGGGCCTGGCGCACCTCCCCGCTTTGGC...GGTGTGTGTTTCTTTCTTGCCTGGCATGGACCCCGAGGCAGGTGATGTGGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR GCA 90 bp GGTCATCAGGCTGCCGGCCGGCCTCCTGCAAGGGCACTGGCCAGGGAGGCCACAACAAATCCCCCTTTGTaGAAAGGGGGAGCTTCCTGC +
Preference number: 4 (lower is better)
Translates to: GHQAAGRPPARALAREATTNPPL*KGGASC
Trigger: GCAGGAAGCTCCCCCTTTGCACAAAGGGGGATTTGT...TGTGGCCTCCCTGGCCAGTGCCCTTGCAGGAGGCCGGCCGGCAGCCTGATGACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR CCA 90 bp AGTTCCCCGCTGAGACTCCCTGGACCCATGGTTTGTGCCTGCTGGGCATCCCACCTCCTGCAAGGGCACTaGCCAGGGAGGCCACAGCTG +
Preference number: 4 (lower is better)
Translates to: SSPLRLPGPMVCACWASHLLQGH*PGRPQL
Trigger: CAGCTGTGGCCTCCCTGGCCAGTGCCCTTGCAGGAG...GTGGGATGCCCAGCAGGCACAAACCATGGGTCCAGGGAGTCTCAGCGGGGAACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR TCA 90 bp GGTCATCAGGCTGCCGGCCGGCCTCCTGCAAGGGCACTGGCCAGGGAGGCCACAGAAGGAGGTTCATCATaGGTTTCAGGTTCTCCGGCT +
Preference number: 4 (lower is better)
Translates to: GHQAAGRPPARALAREATEGGSS*VSGSPA
Trigger: AGCCGGAGAACCTGAAACTCATGATGAACCTCCTTC...TGTGGCCTCCCTGGCCAGTGCCCTTGCAGGAGGCCGGCCGGCAGCCTGATGACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR GCA 90 bp GGCCCCACATCACCTGCCTCGGGGTCCATGCCAGGCAAGAAAGAAACACACACCTACGGGTCATCAGGCTaGCGGCCGGCCTCCTGCAAG +
Preference number: 4 (lower is better)
Translates to: GPTSPASGSMPGKKETHTYGSSG*RPASCK
Trigger: CTTGCAGGAGGCCGGCCGGCAGCCTGATGACCCGTA...GGTGTGTGTTTCTTTCTTGCCTGGCATGGACCCCGAGGCAGGTGATGTGGGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR CCA 90 bp AGTACGGGTCATCAGGCTGCCGGCCGGCCTCCTGCAAGGGCACTGGCCAGGGAGCCCTCACTCACCCTCTaGAAGCTAATATGGAGCAGC +
Preference number: 4 (lower is better)
Translates to: STGHQAAGRPPARALAREPSLTL*KLIWSS
Trigger: GCTGCTCCATATTAGCTTCCAGAGGGTGAGTGAGGG...CTCCCTGGCCAGTGCCCTTGCAGGAGGCCGGCCGGCAGCCTGATGACCCGTACT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR GCA 90 bp GGTCATCAGGCTGCCGGCCGGCCTCCTGCAAGGGCACTGGCCAGGGAGGCCACATCACTAGCAGGCCACTaGTGTAGAGTTCTTGTGCTA +
Preference number: 4 (lower is better)
Translates to: GHQAAGRPPARALAREATSLAGH*CRVLVL
Trigger: TAGCACAAGAACTCTACAGCAGTGGCCTGCTAGTGA...TGTGGCCTCCCTGGCCAGTGCCCTTGCAGGAGGCCGGCCGGCAGCCTGATGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR GCA 90 bp CCTTCTGGGATCTCTCAGTGCCCTGAGCGATCTGTGTGTCTACCTACAGATGGGTGCCGGCCGGCCTCCTaGAAGGGCACTGGCCAGGGA +
Preference number: 4 (lower is better)
Translates to: PSGISQCPERSVCLPTDGCRPAS*KGTGQG
Trigger: TCCCTGGCCAGTGCCCTTGCAGGAGGCCGGCCGGCA...CCCATCTGTAGGTAGACACACAGATCGCTCAGGGCACTGAGAGATCCCAGAAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR GCA 90 bp CACACTGTACAAACTGGACAAATGAGACGACTGACTGTGACAGGGGCCGGGGAGTGCCGGCCGGCCTCCTaGAAGGGCACTGGCCAGGGA +
Preference number: 4 (lower is better)
Translates to: HTVQTGQMRRLTVTGAGECRPAS*KGTGQG
Trigger: TCCCTGGCCAGTGCCCTTGCAGGAGGCCGGCCGGCA...CTCCCCGGCCCCTGTCACAGTCAGTCGTCTCATTTGTCCAGTTTGTACAGTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR CCA 90 bp GGTCATCAGGCTGCCGGCCGGCCTCCTGCAAGGGCACTGGCCAGGGAGGCCACAAGCCACTGCTTCTGTTaGGGGTTCTTTCTCGTTTGT +
Preference number: 4 (lower is better)
Translates to: GHQAAGRPPARALAREATSHCFC*GFFLVC
Trigger: ACAAACGAGAAAGAACCCCCAACAGAAGCAGTGGCT...TGTGGCCTCCCTGGCCAGTGCCCTTGCAGGAGGCCGGCCGGCAGCCTGATGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR CCA 90 bp AGTTCCCCGCTGAGACTCCCTGGACCCATGGTTTGTGCCTGCTGGGCATCCCACCCCGCTGAGACTCCCTaGACCCATGGTTTGTGCCTG +
Preference number: 4 (lower is better)
Translates to: SSPLRLPGPMVCACWASHPAETP*THGLCL
Trigger: CAGGCACAAACCATGGGTCCAGGGAGTCTCAGCGGG...GTGGGATGCCCAGCAGGCACAAACCATGGGTCCAGGGAGTCTCAGCGGGGAACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR GCA 90 bp GGCCCCACATCACCTGCCTCGGGGTCCATGCCAGGCAAGAAAGAAACACACACCGGACAGGTACAGGTCTaGAGCCCAGGGGTAAGGGAC +
Preference number: 4 (lower is better)
Translates to: GPTSPASGSMPGKKETHTGQVQV*SPGVRD
Trigger: GTCCCTTACCCCTGGGCTGCAGACCTGTACCTGTCC...GGTGTGTGTTTCTTTCTTGCCTGGCATGGACCCCGAGGCAGGTGATGTGGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000347776.9
ENST00000610540.4
CDS-3UTR CCA 90 bp GGCCCCACATCACCTGCCTCGGGGTCCATGCCAGGCAAGAAAGAAACACACACCCCCGCTGAGACTCCCTaGACCCATGGTTTGTGCCTG +
Preference number: 4 (lower is better)
Translates to: GPTSPASGSMPGKKETHTPAETP*THGLCL
Trigger: CAGGCACAAACCATGGGTCCAGGGAGTCTCAGCGGG...GGTGTGTGTTTCTTTCTTGCCTGGCATGGACCCCGAGGCAGGTGATGTGGGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR TCA 90 bp GGCCCCACATCACCTGCCTCGGGGTCCATGCCAGGCAAGAAAGAAACACACACCCCCCGTGACCCTTGTTaGTCCATCCTCTTCCTGCTC +
Preference number: 4 (lower is better)
Translates to: GPTSPASGSMPGKKETHTPRDPC*SILFLL
Trigger: GAGCAGGAAGAGGATGGATCAACAAGGGTCACGGGG...GGTGTGTGTTTCTTTCTTGCCTGGCATGGACCCCGAGGCAGGTGATGTGGGGCC
60% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR TCA 90 bp CACACTGTACAAACTGGACAAATGAGACGACTGACTGTGACAGGGGCCGGGGAGGCGCCACCACTCCAGTaGTGCCGGCCTCTCGACTAC +
Preference number: 4 (lower is better)
Translates to: HTVQTGQMRRLTVTGAGEAPPLQ*CRPLDY
Trigger: GTAGTCGAGAGGCCGGCATCACTGGAGTGGTGGCGC...CTCCCCGGCCCCTGTCACAGTCAGTCGTCTCATTTGTCCAGTTTGTACAGTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409308.6
ENST00000410043.5
CDS-3UTR GCA 90 bp AGTTCCCCGCTGAGACTCCCTGGACCCATGGTTTGTGCCTGCTGGGCATCCCACTTTAGCGGCTCATTGTaGCCAGGGGCTCACATCTGC +
Preference number: 4 (lower is better)
Translates to: SSPLRLPGPMVCACWASHFSGSL*PGAHIC
Trigger: GCAGATGTGAGCCCCTGGGCACAATGAGCCGCTAAA...GTGGGATGCCCAGCAGGCACAAACCATGGGTCCAGGGAGTCTCAGCGGGGAACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR GCA 90 bp AGTTCCCCGCTGAGACTCCCTGGACCCATGGTTTGTGCCTGCTGGGCATCCCACTGGACCCATGGTTTGTaGCTGCTGGGCATCCCACTA +
Preference number: 4 (lower is better)
Translates to: SSPLRLPGPMVCACWASHWTHGL*LLGIPL
Trigger: TAGTGGGATGCCCAGCAGGCACAAACCATGGGTCCA...GTGGGATGCCCAGCAGGCACAAACCATGGGTCCAGGGAGTCTCAGCGGGGAACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR GCA 90 bp CCTTCTGGGATCTCTCAGTGCCCTGAGCGATCTGTGTGTCTACCTACAGATGGGAGGCCCCACATCACCTaGCTCGGGGTCCATGCCAGG +
Preference number: 4 (lower is better)
Translates to: PSGISQCPERSVCLPTDGRPHIT*LGVHAR
Trigger: CCTGGCATGGACCCCGAGGCAGGTGATGTGGGGCCT...CCCATCTGTAGGTAGACACACAGATCGCTCAGGGCACTGAGAGATCCCAGAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR GCA 90 bp CTGGGATCTCTCAGTGCCCTGAGCGATCTGTGTGTCTACCTACAGATGGGCAAAGCCAAAGCGGGGAGGTaGGCCAGGCCCCACATCACC +
Preference number: 4 (lower is better)
Translates to: LGSLSALSDLCVYLQMGKAKAGR*ARPHIT
Trigger: GGTGATGTGGGGCCTGGCGCACCTCCCCGCTTTGGC...TTTGCCCATCTGTAGGTAGACACACAGATCGCTCAGGGCACTGAGAGATCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR GCA 90 bp ATGACACACTGTACAAACTGGACAAATGAGACGACTGACTGTGACAGGGGCCGGTGCCGGCCGGCCTCCTaGAAGGGCACTGGCCAGGGA +
Preference number: 4 (lower is better)
Translates to: MTHCTNWTNETTDCDRGRCRPAS*KGTGQG
Trigger: TCCCTGGCCAGTGCCCTTGCAGGAGGCCGGCCGGCA...CCGGCCCCTGTCACAGTCAGTCGTCTCATTTGTCCAGTTTGTACAGTGTGTCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR GCA 90 bp CCTTCTGGGATCTCTCAGTGCCCTGAGCGATCTGTGTGTCTACCTACAGATGGGTACGGGTCATCAGGCTaGCGGCCGGCCTCCTGCAAG +
Preference number: 4 (lower is better)
Translates to: PSGISQCPERSVCLPTDGYGSSG*RPASCK
Trigger: CTTGCAGGAGGCCGGCCGGCAGCCTGATGACCCGTA...CCCATCTGTAGGTAGACACACAGATCGCTCAGGGCACTGAGAGATCCCAGAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR TCA 90 bp GGTCATCAGGCTGCCGGCCGGCCTCCTGCAAGGGCACTGGCCAGGGAGGCCACATCAAAGCACTTTAGATaGAGTAGCCTTTATCGTCCA +
Preference number: 4 (lower is better)
Translates to: GHQAAGRPPARALAREATSKHFR*SSLYRP
Trigger: TGGACGATAAAGGCTACTTCATCTAAAGTGCTTTGA...TGTGGCCTCCCTGGCCAGTGCCCTTGCAGGAGGCCGGCCGGCAGCCTGATGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355854.8
ENST00000610540.4
CDS-3UTR TCA 90 bp AGTTCCCCGCTGAGACTCCCTGGACCCATGGTTTGTGCCTGCTGGGCATCCCACATGATGGCAAAGTTGTaGCGGTCCAGGATCAGCTCC +
Preference number: 4 (lower is better)
Translates to: SSPLRLPGPMVCACWASHMMAKL*RSRISS
Trigger: GGAGCTGATCCTGGACCGTCACAACTTTGCCATCAT...GTGGGATGCCCAGCAGGCACAAACCATGGGTCCAGGGAGTCTCAGCGGGGAACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR GCA 90 bp AGTTCCCCGCTGAGACTCCCTGGACCCATGGTTTGTGCCTGCTGGGCATCCCACTCTGGGATCTCTCAGTaGCCTGAGCGATCTGTGTGT +
Preference number: 4 (lower is better)
Translates to: SSPLRLPGPMVCACWASHSGISQ*PERSVC
Trigger: ACACACAGATCGCTCAGGGCACTGAGAGATCCCAGA...GTGGGATGCCCAGCAGGCACAAACCATGGGTCCAGGGAGTCTCAGCGGGGAACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR GCA 90 bp ACTGTACAAACTGGACAAATGAGACGACTGACTGTGACAGGGGCCGGGGAGCTCGCTCAGTTGCTCCCCTaGTCACCTGGACTGCGGGAG +
Preference number: 4 (lower is better)
Translates to: TVQTGQMRRLTVTGAGELAQLLP*SPGLRE
Trigger: CTCCCGCAGTCCAGGTGAGCAGGGGAGCAACTGAGC...GAGCTCCCCGGCCCCTGTCACAGTCAGTCGTCTCATTTGTCCAGTTTGTACAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409130.5
ENST00000409308.6
ENST00000610540.4
CDS-3UTR GCA 90 bp GGCCCCACATCACCTGCCTCGGGGTCCATGCCAGGCAAGAAAGAAACACACACCCCAAGGGTGGTGCCCTaGCAGGTAACTCTTCAGGTA +
Preference number: 4 (lower is better)
Translates to: GPTSPASGSMPGKKETHTPRVVP*QVTLQV
Trigger: TACCTGAAGAGTTACCTGGCAGGGCACCACCCTTGG...GGTGTGTGTTTCTTTCTTGCCTGGCATGGACCCCGAGGCAGGTGATGTGGGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR GCA 90 bp TTACCTTCTGGGATCTCTCAGTGCCCTGAGCGATCTGTGTGTCTACCTACAGATTGCCGGCCGGCCTCCTaGAAGGGCACTGGCCAGGGA +
Preference number: 4 (lower is better)
Translates to: LPSGISQCPERSVCLPTDCRPAS*KGTGQG
Trigger: TCCCTGGCCAGTGCCCTTGCAGGAGGCCGGCCGGCA...ATCTGTAGGTAGACACACAGATCGCTCAGGGCACTGAGAGATCCCAGAAGGTAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR CCA 90 bp CACATCACCTGCCTCGGGGTCCATGCCAGGCAAGAAAGAAACACACACCTGGGCGCCATGCTGAGGAGCTaGGATGGAATGCAGGACAGG +
Preference number: 4 (lower is better)
Translates to: HITCLGVHARQERNTHLGAMLRS*DGMQDR
Trigger: CCTGTCCTGCATTCCATCCCAGCTCCTCAGCATGGC...GCCCAGGTGTGTGTTTCTTTCTTGCCTGGCATGGACCCCGAGGCAGGTGATGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR TCA 90 bp AGTTCCCCGCTGAGACTCCCTGGACCCATGGTTTGTGCCTGCTGGGCATCCCACGAAGGAGGTTCATCATaGGTTTCAGGTTCTCCGGCT +
Preference number: 4 (lower is better)
Translates to: SSPLRLPGPMVCACWASHEGGSS*VSGSPA
Trigger: AGCCGGAGAACCTGAAACTCATGATGAACCTCCTTC...GTGGGATGCCCAGCAGGCACAAACCATGGGTCCAGGGAGTCTCAGCGGGGAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR GCA 90 bp CACATCACCTGCCTCGGGGTCCATGCCAGGCAAGAAAGAAACACACACCTGGGCTTTAGCGGCTCATTGTaGCCAGGGGCTCACATCTGC +
Preference number: 4 (lower is better)
Translates to: HITCLGVHARQERNTHLGFSGSL*PGAHIC
Trigger: GCAGATGTGAGCCCCTGGGCACAATGAGCCGCTAAA...GCCCAGGTGTGTGTTTCTTTCTTGCCTGGCATGGACCCCGAGGCAGGTGATGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR GCA 90 bp CACACTGTACAAACTGGACAAATGAGACGACTGACTGTGACAGGGGCCGGGGAGGGAGCTGGGATGGAATaGAGGACAGGGAGAGAGGGG +
Preference number: 4 (lower is better)
Translates to: HTVQTGQMRRLTVTGAGEGAGME*RTGREG
Trigger: CCCCTCTCTCCCTGTCCTGCATTCCATCCCAGCTCC...CTCCCCGGCCCCTGTCACAGTCAGTCGTCTCATTTGTCCAGTTTGTACAGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409130.5
ENST00000409308.6
ENST00000610540.4
CDS-3UTR CCA 90 bp TACCTTCTGGGATCTCTCAGTGCCCTGAGCGATCTGTGTGTCTACCTACAGATGCTCCTGCAAGGGCACTaGCCAGGGAGGCCACAGCTG +
Preference number: 4 (lower is better)
Translates to: YLLGSLSALSDLCVYLQMLLQGH*PGRPQL
Trigger: CAGCTGTGGCCTCCCTGGCCAGTGCCCTTGCAGGAG...CATCTGTAGGTAGACACACAGATCGCTCAGGGCACTGAGAGATCCCAGAAGGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR CCA 90 bp ATGACACACTGTACAAACTGGACAAATGAGACGACTGACTGTGACAGGGGCCGGCTCCTGCAAGGGCACTaGCCAGGGAGGCCACAGCTG +
Preference number: 4 (lower is better)
Translates to: MTHCTNWTNETTDCDRGRLLQGH*PGRPQL
Trigger: CAGCTGTGGCCTCCCTGGCCAGTGCCCTTGCAGGAG...CCGGCCCCTGTCACAGTCAGTCGTCTCATTTGTCCAGTTTGTACAGTGTGTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR TCA 90 bp CACATCACCTGCCTCGGGGTCCATGCCAGGCAAGAAAGAAACACACACCTGGGCATGATGGCAAAGTTGTaGCGGTCCAGGATCAGCTCC +
Preference number: 4 (lower is better)
Translates to: HITCLGVHARQERNTHLGMMAKL*RSRISS
Trigger: GGAGCTGATCCTGGACCGTCACAACTTTGCCATCAT...GCCCAGGTGTGTGTTTCTTTCTTGCCTGGCATGGACCCCGAGGCAGGTGATGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR TCA 90 bp CACACTGTACAAACTGGACAAATGAGACGACTGACTGTGACAGGGGCCGGGGAGCCCCGTGACCCTTGTTaGTCCATCCTCTTCCTGCTC +
Preference number: 4 (lower is better)
Translates to: HTVQTGQMRRLTVTGAGEPRDPC*SILFLL
Trigger: GAGCAGGAAGAGGATGGATCAACAAGGGTCACGGGG...CTCCCCGGCCCCTGTCACAGTCAGTCGTCTCATTTGTCCAGTTTGTACAGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR TCA 90 bp CCTTCTGGGATCTCTCAGTGCCCTGAGCGATCTGTGTGTCTACCTACAGATGGGATAGAAGTTCCCCGCTaGGACTCCCTGGACCCATGG +
Preference number: 4 (lower is better)
Translates to: PSGISQCPERSVCLPTDGIEVPR*DSLDPW
Trigger: CCATGGGTCCAGGGAGTCTCAGCGGGGAACTTCTAT...CCCATCTGTAGGTAGACACACAGATCGCTCAGGGCACTGAGAGATCCCAGAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR GCA 90 bp GGCCCCACATCACCTGCCTCGGGGTCCATGCCAGGCAAGAAAGAAACACACACCCCTGGGAGGTGTGGATaGACTGATTACAGTCCAAAG +
Preference number: 4 (lower is better)
Translates to: GPTSPASGSMPGKKETHTPGRCG*TDYSPK
Trigger: CTTTGGACTGTAATCAGTGCATCCACACCTCCCAGG...GGTGTGTGTTTCTTTCTTGCCTGGCATGGACCCCGAGGCAGGTGATGTGGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR GCA 90 bp ACATTAACGTTACCTTCTGGGATCTCTCAGTGCCCTGAGCGATCTGTGTGTCTAGCCAAAGCGGGGAGGTaGGCCAGGCCCCACATCACC +
Preference number: 4 (lower is better)
Translates to: TLTLPSGISQCPERSVCLAKAGR*ARPHIT
Trigger: GGTGATGTGGGGCCTGGCGCACCTCCCCGCTTTGGC...TAGACACACAGATCGCTCAGGGCACTGAGAGATCCCAGAAGGTAACGTTAATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR GCA 90 bp CTGGGATCTCTCAGTGCCCTGAGCGATCTGTGTGTCTACCTACAGATGGGCAAAGGACAGGTACAGGTCTaGAGCCCAGGGGTAAGGGAC +
Preference number: 4 (lower is better)
Translates to: LGSLSALSDLCVYLQMGKGQVQV*SPGVRD
Trigger: GTCCCTTACCCCTGGGCTGCAGACCTGTACCTGTCC...TTTGCCCATCTGTAGGTAGACACACAGATCGCTCAGGGCACTGAGAGATCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000347776.9
ENST00000610540.4
CDS-3UTR GCA 90 bp CACACTGTACAAACTGGACAAATGAGACGACTGACTGTGACAGGGGCCGGGGAGTCCGGAGGAAACAGCTaGGCCACCACTCCAGTGATG +
Preference number: 4 (lower is better)
Translates to: HTVQTGQMRRLTVTGAGESGGNS*ATTPVM
Trigger: CATCACTGGAGTGGTGGCGCAGCTGTTTCCTCCGGA...CTCCCCGGCCCCTGTCACAGTCAGTCGTCTCATTTGTCCAGTTTGTACAGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409308.6
ENST00000410043.5
CDS-3UTR CCA 90 bp ACTGTACAAACTGGACAAATGAGACGACTGACTGTGACAGGGGCCGGGGAGCTCGCTGAGAGGGAGCACTaGATCCTGGGAGGTGTGGAT +
Preference number: 4 (lower is better)
Translates to: TVQTGQMRRLTVTGAGELAEREH*ILGGVD
Trigger: ATCCACACCTCCCAGGATCCAGTGCTCCCTCTCAGC...GAGCTCCCCGGCCCCTGTCACAGTCAGTCGTCTCATTTGTCCAGTTTGTACAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409130.5
ENST00000409308.6
ENST00000610540.4
CDS-3UTR CCA 90 bp CTTGGTGATGCCTGTCAATTGAGCTCCCATTTAGCGGCTCATTGTGCCCAGGGGGCCATGCTGAGGAGCTaGGATGGAATGCAGGACAGG +
Preference number: 4 (lower is better)
Translates to: LGDACQLSSHLAAHCAQGAMLRS*DGMQDR
Trigger: CCTGTCCTGCATTCCATCCCAGCTCCTCAGCATGGC...CCCCTGGGCACAATGAGCCGCTAAATGGGAGCTCAATTGACAGGCATCACCAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409130.5
ENST00000409308.6
ENST00000610540.4
CDS-3UTR TCA 90 bp CACATCACCTGCCTCGGGGTCCATGCCAGGCAAGAAAGAAACACACACCTGGGCGAACTCAGTCCTCCTTaGAGACTTGGTGATGCCTGT +
Preference number: 4 (lower is better)
Translates to: HITCLGVHARQERNTHLGELSPP*RLGDAC
Trigger: ACAGGCATCACCAAGTCTTCAAGGAGGACTGAGTTC...GCCCAGGTGTGTGTTTCTTTCTTGCCTGGCATGGACCCCGAGGCAGGTGATGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR TCA 90 bp CCTTCTGGGATCTCTCAGTGCCCTGAGCGATCTGTGTGTCTACCTACAGATGGGGATCTCTCAGTGCCCTaGGCGATCTGTGTGTCTACC +
Preference number: 4 (lower is better)
Translates to: PSGISQCPERSVCLPTDGDLSVP*AICVST
Trigger: GGTAGACACACAGATCGCTCAGGGCACTGAGAGATC...CCCATCTGTAGGTAGACACACAGATCGCTCAGGGCACTGAGAGATCCCAGAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409130.5
ENST00000409308.6
ENST00000610540.4
CDS-3UTR TCA 90 bp ACTGTACAAACTGGACAAATGAGACGACTGACTGTGACAGGGGCCGGGGAGCTCGATCTCTCAGTGCCCTaGGCGATCTGTGTGTCTACC +
Preference number: 4 (lower is better)
Translates to: TVQTGQMRRLTVTGAGELDLSVP*AICVST
Trigger: GGTAGACACACAGATCGCTCAGGGCACTGAGAGATC...GAGCTCCCCGGCCCCTGTCACAGTCAGTCGTCTCATTTGTCCAGTTTGTACAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409130.5
ENST00000409308.6
ENST00000610540.4
CDS-3UTR TCA 90 bp CTTGGTGATGCCTGTCAATTGAGCTCCCATTTAGCGGCTCATTGTGCCCAGGGGGATCTCTCAGTGCCCTaGGCGATCTGTGTGTCTACC +
Preference number: 4 (lower is better)
Translates to: LGDACQLSSHLAAHCAQGDLSVP*AICVST
Trigger: GGTAGACACACAGATCGCTCAGGGCACTGAGAGATC...CCCCTGGGCACAATGAGCCGCTAAATGGGAGCTCAATTGACAGGCATCACCAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409130.5
ENST00000409308.6
ENST00000610540.4
CDS-3UTR TCA 90 bp CACACTGTACAAACTGGACAAATGAGACGACTGACTGTGACAGGGGCCGGGGAGGTCCCCTATTCCCCGTaGCCCTTGTTGATCCATCCT +
Preference number: 4 (lower is better)
Translates to: HTVQTGQMRRLTVTGAGEVPYSP*PLLIHP
Trigger: AGGATGGATCAACAAGGGTCACGGGGAATAGGGGAC...CTCCCCGGCCCCTGTCACAGTCAGTCGTCTCATTTGTCCAGTTTGTACAGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR TCA 90 bp AGTTCCCCGCTGAGACTCCCTGGACCCATGGTTTGTGCCTGCTGGGCATCCCACCCCGTTTTAGATGGTTaGTGTCTGAAACGAAACCAC +
Preference number: 4 (lower is better)
Translates to: SSPLRLPGPMVCACWASHPVLDG*CLKRNH
Trigger: GTGGTTTCGTTTCAGACATCAACCATCTAAAACGGG...GTGGGATGCCCAGCAGGCACAAACCATGGGTCCAGGGAGTCTCAGCGGGGAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR GCA 90 bp GGCCCCACATCACCTGCCTCGGGGTCCATGCCAGGCAAGAAAGAAACACACACCTCACTAGCAGGCCACTaGTGTAGAGTTCTTGTGCTA +
Preference number: 4 (lower is better)
Translates to: GPTSPASGSMPGKKETHTSLAGH*CRVLVL
Trigger: TAGCACAAGAACTCTACAGCAGTGGCCTGCTAGTGA...GGTGTGTGTTTCTTTCTTGCCTGGCATGGACCCCGAGGCAGGTGATGTGGGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR GCA 90 bp ACTGTACAAACTGGACAAATGAGACGACTGACTGTGACAGGGGCCGGGGAGCTCTTTAGCGGCTCATTGTaGCCAGGGGCTCACATCTGC +
Preference number: 4 (lower is better)
Translates to: TVQTGQMRRLTVTGAGELFSGSL*PGAHIC
Trigger: GCAGATGTGAGCCCCTGGGCACAATGAGCCGCTAAA...GAGCTCCCCGGCCCCTGTCACAGTCAGTCGTCTCATTTGTCCAGTTTGTACAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409130.5
ENST00000409308.6
ENST00000610540.4
CDS-3UTR GCA 90 bp AGACTTGGTGATGCCTGTCAATTGAGCTCCCATTTAGCGGCTCATTGTGCCCAGGGAGCTGGGATGGAATaGAGGACAGGGAGAGAGGGG +
Preference number: 4 (lower is better)
Translates to: RLGDACQLSSHLAAHCAQGAGME*RTGREG
Trigger: CCCCTCTCTCCCTGTCCTGCATTCCATCCCAGCTCC...CTGGGCACAATGAGCCGCTAAATGGGAGCTCAATTGACAGGCATCACCAAGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409130.5
ENST00000409308.6
ENST00000610540.4
CDS-3UTR GCA 90 bp CTTGGTGATGCCTGTCAATTGAGCTCCCATTTAGCGGCTCATTGTGCCCAGGGGTGGACCCATGGTTTGTaGCTGCTGGGCATCCCACTA +
Preference number: 4 (lower is better)
Translates to: LGDACQLSSHLAAHCAQGWTHGL*LLGIPL
Trigger: TAGTGGGATGCCCAGCAGGCACAAACCATGGGTCCA...CCCCTGGGCACAATGAGCCGCTAAATGGGAGCTCAATTGACAGGCATCACCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR GCA 90 bp CCTTCTGGGATCTCTCAGTGCCCTGAGCGATCTGTGTGTCTACCTACAGATGGGCCAAGGGTGGTGCCCTaGCAGGTAACTCTTCAGGTA +
Preference number: 4 (lower is better)
Translates to: PSGISQCPERSVCLPTDGPRVVP*QVTLQV
Trigger: TACCTGAAGAGTTACCTGGCAGGGCACCACCCTTGG...CCCATCTGTAGGTAGACACACAGATCGCTCAGGGCACTGAGAGATCCCAGAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR CCA 90 bp CTGGGATCTCTCAGTGCCCTGAGCGATCTGTGTGTCTACCTACAGATGGGCAAAGCTGAGAGGGAGCACTaGATCCTGGGAGGTGTGGAT +
Preference number: 4 (lower is better)
Translates to: LGSLSALSDLCVYLQMGKAEREH*ILGGVD
Trigger: ATCCACACCTCCCAGGATCCAGTGCTCCCTCTCAGC...TTTGCCCATCTGTAGGTAGACACACAGATCGCTCAGGGCACTGAGAGATCCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409130.5
ENST00000409308.6
ENST00000610540.4
CDS-3UTR CCA 90 bp CTGGGATCTCTCAGTGCCCTGAGCGATCTGTGTGTCTACCTACAGATGGGCAAAGCCATGCTGAGGAGCTaGGATGGAATGCAGGACAGG +
Preference number: 4 (lower is better)
Translates to: LGSLSALSDLCVYLQMGKAMLRS*DGMQDR
Trigger: CCTGTCCTGCATTCCATCCCAGCTCCTCAGCATGGC...TTTGCCCATCTGTAGGTAGACACACAGATCGCTCAGGGCACTGAGAGATCCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409130.5
ENST00000409308.6
ENST00000610540.4
CDS-3UTR CCA 90 bp CACATCACCTGCCTCGGGGTCCATGCCAGGCAAGAAAGAAACACACACCTGGGCATGGTTTGTGCCTGCTaGGCATCCCACTATGCTGAT +
Preference number: 4 (lower is better)
Translates to: HITCLGVHARQERNTHLGMVCAC*ASHYAD
Trigger: ATCAGCATAGTGGGATGCCCAGCAGGCACAAACCAT...GCCCAGGTGTGTGTTTCTTTCTTGCCTGGCATGGACCCCGAGGCAGGTGATGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR CCA 90 bp AGTTCCCCGCTGAGACTCCCTGGACCCATGGTTTGTGCCTGCTGGGCATCCCACAAAGGGGATCAGTCCTaGAGAACACATTTCTCTTCC +
Preference number: 4 (lower is better)
Translates to: SSPLRLPGPMVCACWASHKGDQS*RTHFSS
Trigger: GGAAGAGAAATGTGTTCTCCAGGACTGATCCCCTTT...GTGGGATGCCCAGCAGGCACAAACCATGGGTCCAGGGAGTCTCAGCGGGGAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR TCA 90 bp TCACTCTATCCAGAGCCACATGTTCACAGTTCTCTAGCAAGCAGGTCACACCCCATAGAAGTTCCCCGCTaGGACTCCCTGGACCCATGG +
Preference number: 4 (lower is better)
Translates to: SLYPEPHVHSSLASRSHPIEVPR*DSLDPW
Trigger: CCATGGGTCCAGGGAGTCTCAGCGGGGAACTTCTAT...GGGGTGTGACCTGCTTGCTAGAGAACTGTGAACATGTGGCTCTGGATAGAGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR GCA 90 bp CACATCACCTGCCTCGGGGTCCATGCCAGGCAAGAAAGAAACACACACCTGGGCTTCTCGTCAGCGAACTaGTCATCATCCGTCCTTTCT +
Preference number: 4 (lower is better)
Translates to: HITCLGVHARQERNTHLGFSSAN*SSSVLS
Trigger: AGAAAGGACGGATGATGAGCAGTTCGCTGACGAGAA...GCCCAGGTGTGTGTTTCTTTCTTGCCTGGCATGGACCCCGAGGCAGGTGATGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR GCA 90 bp CTTGGTGATGCCTGTCAATTGAGCTCCCATTTAGCGGCTCATTGTGCCCAGGGGTCTGGGATCTCTCAGTaGCCTGAGCGATCTGTGTGT +
Preference number: 4 (lower is better)
Translates to: LGDACQLSSHLAAHCAQGSGISQ*PERSVC
Trigger: ACACACAGATCGCTCAGGGCACTGAGAGATCCCAGA...CCCCTGGGCACAATGAGCCGCTAAATGGGAGCTCAATTGACAGGCATCACCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409130.5
ENST00000409308.6
ENST00000610540.4
CDS-3UTR GCA 90 bp TCTCTCAGTGCCCTGAGCGATCTGTGTGTCTACCTACAGATGGGCAAAGCATTTGGAGCTGGGATGGAATaGAGGACAGGGAGAGAGGGG +
Preference number: 4 (lower is better)
Translates to: SLSALSDLCVYLQMGKAFGAGME*RTGREG
Trigger: CCCCTCTCTCCCTGTCCTGCATTCCATCCCAGCTCC...AAATGCTTTGCCCATCTGTAGGTAGACACACAGATCGCTCAGGGCACTGAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409130.5
ENST00000409308.6
ENST00000610540.4
CDS-3UTR GCA 90 bp ACATTAACGTTACCTTCTGGGATCTCTCAGTGCCCTGAGCGATCTGTGTGTCTAGCTCAGTTGCTCCCCTaGTCACCTGGACTGCGGGAG +
Preference number: 4 (lower is better)
Translates to: TLTLPSGISQCPERSVCLAQLLP*SPGLRE
Trigger: CTCCCGCAGTCCAGGTGAGCAGGGGAGCAACTGAGC...TAGACACACAGATCGCTCAGGGCACTGAGAGATCCCAGAAGGTAACGTTAATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409130.5
ENST00000409308.6
ENST00000610540.4
CDS-3UTR GCA 90 bp GAAATGACACACTGTACAAACTGGACAAATGAGACGACTGACTGTGACAGGGGCGCTCAGTTGCTCCCCTaGTCACCTGGACTGCGGGAG +
Preference number: 4 (lower is better)
Translates to: EMTHCTNWTNETTDCDRGAQLLP*SPGLRE
Trigger: CTCCCGCAGTCCAGGTGAGCAGGGGAGCAACTGAGC...GCCCCTGTCACAGTCAGTCGTCTCATTTGTCCAGTTTGTACAGTGTGTCATTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409130.5
ENST00000409308.6
ENST00000610540.4
CDS-3UTR GCA 90 bp AGACTTGGTGATGCCTGTCAATTGAGCTCCCATTTAGCGGCTCATTGTGCCCAGTCCGGAGGAAACAGCTaGGCCACCACTCCAGTGATG +
Preference number: 4 (lower is better)
Translates to: RLGDACQLSSHLAAHCAQSGGNS*ATTPVM
Trigger: CATCACTGGAGTGGTGGCGCAGCTGTTTCCTCCGGA...CTGGGCACAATGAGCCGCTAAATGGGAGCTCAATTGACAGGCATCACCAAGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409308.6
CDS-3UTR CCA 90 bp ACTGTACAAACTGGACAAATGAGACGACTGACTGTGACAGGGGCCGGGGAGCTCAGCATTTTTGCACCCTaGCCCCATTCCCAGTTCTCC +
Preference number: 4 (lower is better)
Translates to: TVQTGQMRRLTVTGAGELSIFAP*PHSQFS
Trigger: GGAGAACTGGGAATGGGGCCAGGGTGCAAAAATGCT...GAGCTCCCCGGCCCCTGTCACAGTCAGTCGTCTCATTTGTCCAGTTTGTACAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409130.5
ENST00000409308.6
ENST00000610540.4
CDS-3UTR CCA 90 bp CTTGGTGATGCCTGTCAATTGAGCTCCCATTTAGCGGCTCATTGTGCCCAGGGGAGCATTTTTGCACCCTaGCCCCATTCCCAGTTCTCC +
Preference number: 4 (lower is better)
Translates to: LGDACQLSSHLAAHCAQGSIFAP*PHSQFS
Trigger: GGAGAACTGGGAATGGGGCCAGGGTGCAAAAATGCT...CCCCTGGGCACAATGAGCCGCTAAATGGGAGCTCAATTGACAGGCATCACCAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409130.5
ENST00000409308.6
ENST00000610540.4
CDS-3UTR CCA 90 bp CCTTCTGGGATCTCTCAGTGCCCTGAGCGATCTGTGTGTCTACCTACAGATGGGGTTCCTAACAGGCCATaGACAGGTACAGGTCTGCAG +
Preference number: 4 (lower is better)
Translates to: PSGISQCPERSVCLPTDGVPNRP*TGTGLQ
Trigger: CTGCAGACCTGTACCTGTCCATGGCCTGTTAGGAAC...CCCATCTGTAGGTAGACACACAGATCGCTCAGGGCACTGAGAGATCCCAGAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000347776.9
ENST00000610540.4
CDS-3UTR TCA 90 bp ACTGTACAAACTGGACAAATGAGACGACTGACTGTGACAGGGGCCGGGGAGCTCCACATGGTGAGGTGCTaGAGACAGCTCTTTCTTGAG +
Preference number: 4 (lower is better)
Translates to: TVQTGQMRRLTVTGAGELHMVRC*RQLFLE
Trigger: CTCAAGAAAGAGCTGTCTTCAGCACCTCACCATGTG...GAGCTCCCCGGCCCCTGTCACAGTCAGTCGTCTCATTTGTCCAGTTTGTACAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355854.8
ENST00000410043.5
ENST00000610540.4
CDS-3UTR TCA 90 bp CTGGGATCTCTCAGTGCCCTGAGCGATCTGTGTGTCTACCTACAGATGGGCAAAAGTTCTTGTGCTAGCTaGGCCACTGCTTCTGTTGGG +
Preference number: 4 (lower is better)
Translates to: LGSLSALSDLCVYLQMGKSSCAS*ATASVG
Trigger: CCCAACAGAAGCAGTGGCTCAGCTAGCACAAGAACT...TTTGCCCATCTGTAGGTAGACACACAGATCGCTCAGGGCACTGAGAGATCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR TCA 90 bp TCACTCTATCCAGAGCCACATGTTCACAGTTCTCTAGCAAGCAGGTCACACCCCGATCTCTCAGTGCCCTaGGCGATCTGTGTGTCTACC +
Preference number: 4 (lower is better)
Translates to: SLYPEPHVHSSLASRSHPDLSVP*AICVST
Trigger: GGTAGACACACAGATCGCTCAGGGCACTGAGAGATC...GGGGTGTGACCTGCTTGCTAGAGAACTGTGAACATGTGGCTCTGGATAGAGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR TCA 90 bp AGACTTGGTGATGCCTGTCAATTGAGCTCCCATTTAGCGGCTCATTGTGCCCAGGATCTCTCAGTGCCCTaGGCGATCTGTGTGTCTACC +
Preference number: 4 (lower is better)
Translates to: RLGDACQLSSHLAAHCAQDLSVP*AICVST
Trigger: GGTAGACACACAGATCGCTCAGGGCACTGAGAGATC...CTGGGCACAATGAGCCGCTAAATGGGAGCTCAATTGACAGGCATCACCAAGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409130.5
ENST00000409308.6
ENST00000610540.4
CDS-3UTR TCA 90 bp TCTCTCAGTGCCCTGAGCGATCTGTGTGTCTACCTACAGATGGGCAAAGCATTTATAGAAGTTCCCCGCTaGGACTCCCTGGACCCATGG +
Preference number: 4 (lower is better)
Translates to: SLSALSDLCVYLQMGKAFIEVPR*DSLDPW
Trigger: CCATGGGTCCAGGGAGTCTCAGCGGGGAACTTCTAT...AAATGCTTTGCCCATCTGTAGGTAGACACACAGATCGCTCAGGGCACTGAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR GCA 90 bp CTGGGATCTCTCAGTGCCCTGAGCGATCTGTGTGTCTACCTACAGATGGGCAAATGGGCAAAGCATTTTTaGACCCTGGCCCCATTCCCA +
Preference number: 4 (lower is better)
Translates to: LGSLSALSDLCVYLQMGKWAKHF*TLAPFP
Trigger: TGGGAATGGGGCCAGGGTGCAAAAATGCTTTGCCCA...TTTGCCCATCTGTAGGTAGACACACAGATCGCTCAGGGCACTGAGAGATCCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409130.5
ENST00000409308.6
ENST00000610540.4
CDS-3UTR GCA 90 bp CACACTGTACAAACTGGACAAATGAGACGACTGACTGTGACAGGGGCCGGGGAGCCTGGGAGGTGTGGATaGACTGATTACAGTCCAAAG +
Preference number: 4 (lower is better)
Translates to: HTVQTGQMRRLTVTGAGEPGRCG*TDYSPK
Trigger: CTTTGGACTGTAATCAGTGCATCCACACCTCCCAGG...CTCCCCGGCCCCTGTCACAGTCAGTCGTCTCATTTGTCCAGTTTGTACAGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409130.5
ENST00000409308.6
ENST00000610540.4
CDS-3UTR GCA 90 bp TCACTCTATCCAGAGCCACATGTTCACAGTTCTCTAGCAAGCAGGTCACACCCCCTGCCTCGGGGTCCATaGCAGGCAAGAAAGAAACAC +
Preference number: 4 (lower is better)
Translates to: SLYPEPHVHSSLASRSHPLPRGP*QARKKH
Trigger: GTGTTTCTTTCTTGCCTGGCATGGACCCCGAGGCAG...GGGGTGTGACCTGCTTGCTAGAGAACTGTGAACATGTGGCTCTGGATAGAGTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR CCA 90 bp TTACCTTCTGGGATCTCTCAGTGCCCTGAGCGATCTGTGTGTCTACCTACAGATGCCATGCTGAGGAGCTaGGATGGAATGCAGGACAGG +
Preference number: 4 (lower is better)
Translates to: LPSGISQCPERSVCLPTDAMLRS*DGMQDR
Trigger: CCTGTCCTGCATTCCATCCCAGCTCCTCAGCATGGC...ATCTGTAGGTAGACACACAGATCGCTCAGGGCACTGAGAGATCCCAGAAGGTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409130.5
ENST00000409308.6
ENST00000610540.4
CDS-3UTR CCA 90 bp CTTGGTGATGCCTGTCAATTGAGCTCCCATTTAGCGGCTCATTGTGCCCAGGGGATGGTTTGTGCCTGCTaGGCATCCCACTATGCTGAT +
Preference number: 4 (lower is better)
Translates to: LGDACQLSSHLAAHCAQGMVCAC*ASHYAD
Trigger: ATCAGCATAGTGGGATGCCCAGCAGGCACAAACCAT...CCCCTGGGCACAATGAGCCGCTAAATGGGAGCTCAATTGACAGGCATCACCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR CCA 90 bp ACATTAACGTTACCTTCTGGGATCTCTCAGTGCCCTGAGCGATCTGTGTGTCTACCCGCTGAGACTCCCTaGACCCATGGTTTGTGCCTG +
Preference number: 4 (lower is better)
Translates to: TLTLPSGISQCPERSVCLPAETP*THGLCL
Trigger: CAGGCACAAACCATGGGTCCAGGGAGTCTCAGCGGG...TAGACACACAGATCGCTCAGGGCACTGAGAGATCCCAGAAGGTAACGTTAATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR CCA 90 bp GAAATGACACACTGTACAAACTGGACAAATGAGACGACTGACTGTGACAGGGGCCCCGCTGAGACTCCCTaGACCCATGGTTTGTGCCTG +
Preference number: 4 (lower is better)
Translates to: EMTHCTNWTNETTDCDRGPAETP*THGLCL
Trigger: CAGGCACAAACCATGGGTCCAGGGAGTCTCAGCGGG...GCCCCTGTCACAGTCAGTCGTCTCATTTGTCCAGTTTGTACAGTGTGTCATTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR CCA 90 bp TCTCTTCCCCTCTCTAGGCAGAGAAATACCTGGCTGAAGAAAAACTACACAACACTCCTGCAAGGGCACTaGCCAGGGAGGCCACAGCTG +
Preference number: 4 (lower is better)
Translates to: SLPLSRQRNTWLKKNYTTLLQGH*PGRPQL
Trigger: CAGCTGTGGCCTCCCTGGCCAGTGCCCTTGCAGGAG...TGTTGTGTAGTTTTTCTTCAGCCAGGTATTTCTCTGCCTAGAGAGGGGAAGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR TCA 90 bp CCTTCTGGGATCTCTCAGTGCCCTGAGCGATCTGTGTGTCTACCTACAGATGGGAATGTAGACACATGGTaGGGTGCTGAAGACAGCTCT +
Preference number: 4 (lower is better)
Translates to: PSGISQCPERSVCLPTDGNVDTW*GAEDSS
Trigger: AGAGCTGTCTTCAGCACCTCACCATGTGTCTACATT...CCCATCTGTAGGTAGACACACAGATCGCTCAGGGCACTGAGAGATCCCAGAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355854.8
ENST00000610540.4
CDS-3UTR TCA 90 bp AGACTTGGTGATGCCTGTCAATTGAGCTCCCATTTAGCGGCTCATTGTGCCCAGAGTTCTTGTGCTAGCTaGGCCACTGCTTCTGTTGGG +
Preference number: 4 (lower is better)
Translates to: RLGDACQLSSHLAAHCAQSSCAS*ATASVG
Trigger: CCCAACAGAAGCAGTGGCTCAGCTAGCACAAGAACT...CTGGGCACAATGAGCCGCTAAATGGGAGCTCAATTGACAGGCATCACCAAGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR TCA 90 bp TACCTTCTGGGATCTCTCAGTGCCCTGAGCGATCTGTGTGTCTACCTACAGATGATGATGGCAAAGTTGTaGCGGTCCAGGATCAGCTCC +
Preference number: 4 (lower is better)
Translates to: YLLGSLSALSDLCVYLQMMMAKL*RSRISS
Trigger: GGAGCTGATCCTGGACCGTCACAACTTTGCCATCAT...CATCTGTAGGTAGACACACAGATCGCTCAGGGCACTGAGAGATCCCAGAAGGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409130.5
ENST00000409308.6
ENST00000610540.4
CDS-3UTR TCA 90 bp CTGGGATCTCTCAGTGCCCTGAGCGATCTGTGTGTCTACCTACAGATGGGCAAAATAGGCTGTGTTTTGTaGGGACTGGCCACAAACACC +
Preference number: 4 (lower is better)
Translates to: LGSLSALSDLCVYLQMGKIGCVL*GLATNT
Trigger: GGTGTTTGTGGCCAGTCCTCACAAAACACAGCCTAT...TTTGCCCATCTGTAGGTAGACACACAGATCGCTCAGGGCACTGAGAGATCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409130.5
ENST00000409308.6
ENST00000610540.4
CDS-3UTR TCA 90 bp CACATCACCTGCCTCGGGGTCCATGCCAGGCAAGAAAGAAACACACACCTGGGCGCATTAAGCAACTCTTaGTTGGTGTTTTCAGAAGCC +
Preference number: 4 (lower is better)
Translates to: HITCLGVHARQERNTHLGALSNS*LVFSEA
Trigger: GGCTTCTGAAAACACCAATCAAGAGTTGCTTAATGC...GCCCAGGTGTGTGTTTCTTTCTTGCCTGGCATGGACCCCGAGGCAGGTGATGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000347776.9
ENST00000610540.4
CDS-3UTR GCA 90 bp CTTGGTGATGCCTGTCAATTGAGCTCCCATTTAGCGGCTCATTGTGCCCAGGGGTCACTAGCAGGCCACTaGTGTAGAGTTCTTGTGCTA +
Preference number: 4 (lower is better)
Translates to: LGDACQLSSHLAAHCAQGSLAGH*CRVLVL
Trigger: TAGCACAAGAACTCTACAGCAGTGGCCTGCTAGTGA...CCCCTGGGCACAATGAGCCGCTAAATGGGAGCTCAATTGACAGGCATCACCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR GCA 90 bp ACTGTACAAACTGGACAAATGAGACGACTGACTGTGACAGGGGCCGGGGAGCTCTCACTAGCAGGCCACTaGTGTAGAGTTCTTGTGCTA +
Preference number: 4 (lower is better)
Translates to: TVQTGQMRRLTVTGAGELSLAGH*CRVLVL
Trigger: TAGCACAAGAACTCTACAGCAGTGGCCTGCTAGTGA...GAGCTCCCCGGCCCCTGTCACAGTCAGTCGTCTCATTTGTCCAGTTTGTACAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000410043.5
ENST00000425242.5
ENST00000610540.4
CDS-3UTR GCA 90 bp TCACTCTATCCAGAGCCACATGTTCACAGTTCTCTAGCAAGCAGGTCACACCCCTCTGGGATCTCTCAGTaGCCTGAGCGATCTGTGTGT +
Preference number: 4 (lower is better)
Translates to: SLYPEPHVHSSLASRSHPSGISQ*PERSVC
Trigger: ACACACAGATCGCTCAGGGCACTGAGAGATCCCAGA...GGGGTGTGACCTGCTTGCTAGAGAACTGTGAACATGTGGCTCTGGATAGAGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR GCA 90 bp TCTCTTCCCCTCTCTAGGCAGAGAAATACCTGGCTGAAGAAAAACTACACAACAGCTCAGTTGCTCCCCTaGTCACCTGGACTGCGGGAG +
Preference number: 4 (lower is better)
Translates to: SLPLSRQRNTWLKKNYTTAQLLP*SPGLRE
Trigger: CTCCCGCAGTCCAGGTGAGCAGGGGAGCAACTGAGC...TGTTGTGTAGTTTTTCTTCAGCCAGGTATTTCTCTGCCTAGAGAGGGGAAGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR GCA 90 bp TTACCTTCTGGGATCTCTCAGTGCCCTGAGCGATCTGTGTGTCTACCTACAGATTGGACCCATGGTTTGTaGCTGCTGGGCATCCCACTA +
Preference number: 4 (lower is better)
Translates to: LPSGISQCPERSVCLPTDWTHGL*LLGIPL
Trigger: TAGTGGGATGCCCAGCAGGCACAAACCATGGGTCCA...ATCTGTAGGTAGACACACAGATCGCTCAGGGCACTGAGAGATCCCAGAAGGTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR GCA 90 bp CTCACAGTATTTACAGTGAACTTTGTGCAAACAAATCCCCCTTTGTGCAAAGGGAGGCCCCACATCACCTaGCTCGGGGTCCATGCCAGG +
Preference number: 4 (lower is better)
Translates to: LTVFTVNFVQTNPPLCKGRPHIT*LGVHAR
Trigger: CCTGGCATGGACCCCGAGGCAGGTGATGTGGGGCCT...CCCTTTGCACAAAGGGGGATTTGTTTGCACAAAGTTCACTGTAAATACTGTGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR GCA 90 bp CTTTCTGAAATGACACACTGTACAAACTGGACAAATGAGACGACTGACTGTGACAGGCCCCACATCACCTaGCTCGGGGTCCATGCCAGG +
Preference number: 4 (lower is better)
Translates to: LSEMTHCTNWTNETTDCDRPHIT*LGVHAR
Trigger: CCTGGCATGGACCCCGAGGCAGGTGATGTGGGGCCT...GTCACAGTCAGTCGTCTCATTTGTCCAGTTTGTACAGTGTGTCATTTCAGAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR GCA 90 bp ATGACACACTGTACAAACTGGACAAATGAGACGACTGACTGTGACAGGGGCCGGACAAATCCCCCTTTGTaGAAAGGGGGAGCTTCCTGC +
Preference number: 4 (lower is better)
Translates to: MTHCTNWTNETTDCDRGRTNPPL*KGGASC
Trigger: GCAGGAAGCTCCCCCTTTGCACAAAGGGGGATTTGT...CCGGCCCCTGTCACAGTCAGTCGTCTCATTTGTCCAGTTTGTACAGTGTGTCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR CCA 90 bp ACTGTACAAACTGGACAAATGAGACGACTGACTGTGACAGGGGCCGGGGAGCTCAGCCACTGCTTCTGTTaGGGGTTCTTTCTCGTTTGT +
Preference number: 4 (lower is better)
Translates to: TVQTGQMRRLTVTGAGELSHCFC*GFFLVC
Trigger: ACAAACGAGAAAGAACCCCCAACAGAAGCAGTGGCT...GAGCTCCCCGGCCCCTGTCACAGTCAGTCGTCTCATTTGTCCAGTTTGTACAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000410043.5
ENST00000425242.5
ENST00000610540.4
CDS-3UTR CCA 90 bp AGTTCCCCGCTGAGACTCCCTGGACCCATGGTTTGTGCCTGCTGGGCATCCCACGATGATTTTGGCAAGTaGTTCATGTCGAATACATTC +
Preference number: 4 (lower is better)
Translates to: SSPLRLPGPMVCACWASHDDFGK*FMSNTF
Trigger: GAATGTATTCGACATGAACCACTTGCCAAAATCATC...GTGGGATGCCCAGCAGGCACAAACCATGGGTCCAGGGAGTCTCAGCGGGGAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR CCA 90 bp TCACTCTATCCAGAGCCACATGTTCACAGTTCTCTAGCAAGCAGGTCACACCCCCCCTCACTCACCCTCTaGAAGCTAATATGGAGCAGC +
Preference number: 4 (lower is better)
Translates to: SLYPEPHVHSSLASRSHPPSLTL*KLIWSS
Trigger: GCTGCTCCATATTAGCTTCCAGAGGGTGAGTGAGGG...GGGGTGTGACCTGCTTGCTAGAGAACTGTGAACATGTGGCTCTGGATAGAGTGA
52% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR CCA 90 bp ACATTAACGTTACCTTCTGGGATCTCTCAGTGCCCTGAGCGATCTGTGTGTCTAGACTCCCTGGACCCATaGTTTGTGCCTGCTGGGCAT +
Preference number: 4 (lower is better)
Translates to: TLTLPSGISQCPERSVCLDSLDP*FVPAGH
Trigger: ATGCCCAGCAGGCACAAACCATGGGTCCAGGGAGTC...TAGACACACAGATCGCTCAGGGCACTGAGAGATCCCAGAAGGTAACGTTAATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR TCA 90 bp TCACTCTATCCAGAGCCACATGTTCACAGTTCTCTAGCAAGCAGGTCACACCCCATAGGCTGTGTTTTGTaGGGACTGGCCACAAACACC +
Preference number: 4 (lower is better)
Translates to: SLYPEPHVHSSLASRSHPIGCVL*GLATNT
Trigger: GGTGTTTGTGGCCAGTCCTCACAAAACACAGCCTAT...GGGGTGTGACCTGCTTGCTAGAGAACTGTGAACATGTGGCTCTGGATAGAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR TCA 90 bp TACCTTCTGGGATCTCTCAGTGCCCTGAGCGATCTGTGTGTCTACCTACAGATGATAGGCTGTGTTTTGTaGGGACTGGCCACAAACACC +
Preference number: 4 (lower is better)
Translates to: YLLGSLSALSDLCVYLQMIGCVL*GLATNT
Trigger: GGTGTTTGTGGCCAGTCCTCACAAAACACAGCCTAT...CATCTGTAGGTAGACACACAGATCGCTCAGGGCACTGAGAGATCCCAGAAGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409130.5
ENST00000409308.6
ENST00000610540.4
CDS-3UTR TCA 90 bp ATGACACACTGTACAAACTGGACAAATGAGACGACTGACTGTGACAGGGGCCGGATAGGCTGTGTTTTGTaGGGACTGGCCACAAACACC +
Preference number: 4 (lower is better)
Translates to: MTHCTNWTNETTDCDRGRIGCVL*GLATNT
Trigger: GGTGTTTGTGGCCAGTCCTCACAAAACACAGCCTAT...CCGGCCCCTGTCACAGTCAGTCGTCTCATTTGTCCAGTTTGTACAGTGTGTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409130.5
ENST00000409308.6
ENST00000410043.5
ENST00000425242.5
ENST00000610540.4
CDS-3UTR TCA 90 bp CTTGGTGATGCCTGTCAATTGAGCTCCCATTTAGCGGCTCATTGTGCCCAGGGGGAGGTGTGGATGCACTaGTTACAGTCCAAAGACATT +
Preference number: 4 (lower is better)
Translates to: LGDACQLSSHLAAHCAQGEVWMH*LQSKDI
Trigger: AATGTCTTTGGACTGTAATCAGTGCATCCACACCTC...CCCCTGGGCACAATGAGCCGCTAAATGGGAGCTCAATTGACAGGCATCACCAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409130.5
ENST00000409308.6
ENST00000610540.4
CDS-3UTR TCA 90 bp ACATTAACGTTACCTTCTGGGATCTCTCAGTGCCCTGAGCGATCTGTGTGTCTAGTCCCCTATTCCCCGTaGCCCTTGTTGATCCATCCT +
Preference number: 4 (lower is better)
Translates to: TLTLPSGISQCPERSVCLVPYSP*PLLIHP
Trigger: AGGATGGATCAACAAGGGTCACGGGGAATAGGGGAC...TAGACACACAGATCGCTCAGGGCACTGAGAGATCCCAGAAGGTAACGTTAATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR GCA 90 bp AGACTTGGTGATGCCTGTCAATTGAGCTCCCATTTAGCGGCTCATTGTGCCCAGCTGGTCAAACCAGCTTaGTTATGCGTTCTCCACTCC +
Preference number: 4 (lower is better)
Translates to: RLGDACQLSSHLAAHCAQLVKPA*LCVLHS
Trigger: GGAGTGGAGAACGCATAAGCAAGCTGGTTTGACCAG...CTGGGCACAATGAGCCGCTAAATGGGAGCTCAATTGACAGGCATCACCAAGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355854.8
ENST00000610540.4
CDS-3UTR GCA 90 bp ACTGTACAAACTGGACAAATGAGACGACTGACTGTGACAGGGGCCGGGGAGCTCTCAAAGTCTATCAGCTaGAGGTCAGCTATCAGTGTC +
Preference number: 4 (lower is better)
Translates to: TVQTGQMRRLTVTGAGELSKSIS*RSAISV
Trigger: GACACTGATAGCTGACCTGCAGCTGATAGACTTTGA...GAGCTCCCCGGCCCCTGTCACAGTCAGTCGTCTCATTTGTCCAGTTTGTACAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000410043.5
ENST00000425242.5
ENST00000610540.4
CDS-3UTR GCA 90 bp TACCTTCTGGGATCTCTCAGTGCCCTGAGCGATCTGTGTGTCTACCTACAGATGCCTGGGAGGTGTGGATaGACTGATTACAGTCCAAAG +
Preference number: 4 (lower is better)
Translates to: YLLGSLSALSDLCVYLQMPGRCG*TDYSPK
Trigger: CTTTGGACTGTAATCAGTGCATCCACACCTCCCAGG...CATCTGTAGGTAGACACACAGATCGCTCAGGGCACTGAGAGATCCCAGAAGGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409130.5
ENST00000409308.6
ENST00000610540.4
CDS-3UTR GCA 90 bp TCTGAAATGACACACTGTACAAACTGGACAAATGAGACGACTGACTGTGACAGGGGAGCTGGGATGGAATaGAGGACAGGGAGAGAGGGG +
Preference number: 4 (lower is better)
Translates to: SEMTHCTNWTNETTDCDRGAGME*RTGREG
Trigger: CCCCTCTCTCCCTGTCCTGCATTCCATCCCAGCTCC...CCTGTCACAGTCAGTCGTCTCATTTGTCCAGTTTGTACAGTGTGTCATTTCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409130.5
ENST00000409308.6
ENST00000610540.4
CDS-3UTR GCA 90 bp TCTCTTCCCCTCTCTAGGCAGAGAAATACCTGGCTGAAGAAAAACTACACAACAGGAGCTGGGATGGAATaGAGGACAGGGAGAGAGGGG +
Preference number: 4 (lower is better)
Translates to: SLPLSRQRNTWLKKNYTTGAGME*RTGREG
Trigger: CCCCTCTCTCCCTGTCCTGCATTCCATCCCAGCTCC...TGTTGTGTAGTTTTTCTTCAGCCAGGTATTTCTCTGCCTAGAGAGGGGAAGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR GCA 90 bp ACTTACAGCAGAAAGCATTCACCCATGACCATTATGAAGGAAATATTCTGTCCCAGGCCCCACATCACCTaGCTCGGGGTCCATGCCAGG +
Preference number: 4 (lower is better)
Translates to: TYSRKHSPMTIMKEIFCPRPHIT*LGVHAR
Trigger: CCTGGCATGGACCCCGAGGCAGGTGATGTGGGGCCT...GGGACAGAATATTTCCTTCATAATGGTCATGGGTGAATGCTTTCTGCTGTAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR GCA 90 bp GAAATGACACACTGTACAAACTGGACAAATGAGACGACTGACTGTGACAGGGGCTCAGTCCTCCTACTGTaGTGCCCGGTTCCTAACAGG +
Preference number: 4 (lower is better)
Translates to: EMTHCTNWTNETTDCDRGSVLLL*CPVPNR
Trigger: CCTGTTAGGAACCGGGCAGCACAGTAGGAGGACTGA...GCCCCTGTCACAGTCAGTCGTCTCATTTGTCCAGTTTGTACAGTGTGTCATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610540.4
CDS-3UTR CCA 90 bp TTACCTTCTGGGATCTCTCAGTGCCCTGAGCGATCTGTGTGTCTACCTACAGATAGCATTTTTGCACCCTaGCCCCATTCCCAGTTCTCC +
Preference number: 4 (lower is better)
Translates to: LPSGISQCPERSVCLPTDSIFAP*PHSQFS
Trigger: GGAGAACTGGGAATGGGGCCAGGGTGCAAAAATGCT...ATCTGTAGGTAGACACACAGATCGCTCAGGGCACTGAGAGATCCCAGAAGGTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409130.5
ENST00000409308.6
ENST00000610540.4
CDS-3UTR CCA 90 bp CCTTCTGGGATCTCTCAGTGCCCTGAGCGATCTGTGTGTCTACCTACAGATGGGACAGTCCAAAGACATTaGCAGCAACAAAGGACACAC +
Preference number: 4 (lower is better)
Translates to: PSGISQCPERSVCLPTDGTVQRH*QQQRTH
Trigger: GTGTGTCCTTTGTTGCTGCCAATGTCTTTGGACTGT...CCCATCTGTAGGTAGACACACAGATCGCTCAGGGCACTGAGAGATCCCAGAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409130.5
ENST00000409308.6
ENST00000610540.4
CDS-3UTR CCA 90 bp CCTTCTGGGATCTCTCAGTGCCCTGAGCGATCTGTGTGTCTACCTACAGATGGGCTCTGGAAGCTAATATaGAGCAGCAGTCACTCTATC +
Preference number: 4 (lower is better)
Translates to: PSGISQCPERSVCLPTDGLWKLI*SSSHSI
Trigger: GATAGAGTGACTGCTGCTCCATATTAGCTTCCAGAG...CCCATCTGTAGGTAGACACACAGATCGCTCAGGGCACTGAGAGATCCCAGAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR CCA 90 bp TTACCTTCTGGGATCTCTCAGTGCCCTGAGCGATCTGTGTGTCTACCTACAGATCCCTCACTCACCCTCTaGAAGCTAATATGGAGCAGC +
Preference number: 4 (lower is better)
Translates to: LPSGISQCPERSVCLPTDPSLTL*KLIWSS
Trigger: GCTGCTCCATATTAGCTTCCAGAGGGTGAGTGAGGG...ATCTGTAGGTAGACACACAGATCGCTCAGGGCACTGAGAGATCCCAGAAGGTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR TCA 90 bp TCACTCTATCCAGAGCCACATGTTCACAGTTCTCTAGCAAGCAGGTCACACCCCAATGTAGACACATGGTaGGGTGCTGAAGACAGCTCT +
Preference number: 4 (lower is better)
Translates to: SLYPEPHVHSSLASRSHPNVDTW*GAEDSS
Trigger: AGAGCTGTCTTCAGCACCTCACCATGTGTCTACATT...GGGGTGTGACCTGCTTGCTAGAGAACTGTGAACATGTGGCTCTGGATAGAGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355854.8
ENST00000610540.4
CDS-3UTR TCA 90 bp ATGACACACTGTACAAACTGGACAAATGAGACGACTGACTGTGACAGGGGCCGGAATGTAGACACATGGTaGGGTGCTGAAGACAGCTCT +
Preference number: 4 (lower is better)
Translates to: MTHCTNWTNETTDCDRGRNVDTW*GAEDSS
Trigger: AGAGCTGTCTTCAGCACCTCACCATGTGTCTACATT...CCGGCCCCTGTCACAGTCAGTCGTCTCATTTGTCCAGTTTGTACAGTGTGTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355854.8
ENST00000410043.5
ENST00000610540.4
CDS-3UTR TCA 90 bp TTACCTTCTGGGATCTCTCAGTGCCCTGAGCGATCTGTGTGTCTACCTACAGATGAAGGAGGTTCATCATaGGTTTCAGGTTCTCCGGCT +
Preference number: 4 (lower is better)
Translates to: LPSGISQCPERSVCLPTDEGGSS*VSGSPA
Trigger: AGCCGGAGAACCTGAAACTCATGATGAACCTCCTTC...ATCTGTAGGTAGACACACAGATCGCTCAGGGCACTGAGAGATCCCAGAAGGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409130.5
ENST00000409308.6
ENST00000610540.4
CDS-3UTR TCA 90 bp TCTCTCAGTGCCCTGAGCGATCTGTGTGTCTACCTACAGATGGGCAAAGCATTTGAACTCAGTCCTCCTTaGAGACTTGGTGATGCCTGT +
Preference number: 4 (lower is better)
Translates to: SLSALSDLCVYLQMGKAFELSPP*RLGDAC
Trigger: ACAGGCATCACCAAGTCTTCAAGGAGGACTGAGTTC...AAATGCTTTGCCCATCTGTAGGTAGACACACAGATCGCTCAGGGCACTGAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409130.5
ENST00000409308.6
ENST00000610540.4
CDS-3UTR TCA 90 bp CTGGGATCTCTCAGTGCCCTGAGCGATCTGTGTGTCTACCTACAGATGGGCAAAGAGGTGTGGATGCACTaGTTACAGTCCAAAGACATT +
Preference number: 4 (lower is better)
Translates to: LGSLSALSDLCVYLQMGKEVWMH*LQSKDI
Trigger: AATGTCTTTGGACTGTAATCAGTGCATCCACACCTC...TTTGCCCATCTGTAGGTAGACACACAGATCGCTCAGGGCACTGAGAGATCCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409130.5
ENST00000409308.6
ENST00000610540.4
CDS-3UTR TCA 90 bp TCTGAAATGACACACTGTACAAACTGGACAAATGAGACGACTGACTGTGACAGGCCCCGTGACCCTTGTTaGTCCATCCTCTTCCTGCTC +
Preference number: 4 (lower is better)
Translates to: SEMTHCTNWTNETTDCDRPRDPC*SILFLL
Trigger: GAGCAGGAAGAGGATGGATCAACAAGGGTCACGGGG...CCTGTCACAGTCAGTCGTCTCATTTGTCCAGTTTGTACAGTGTGTCATTTCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR GCA 90 bp CCTTCTGGGATCTCTCAGTGCCCTGAGCGATCTGTGTGTCTACCTACAGATGGGTCCCTCTCTAACACTTaGTTTCAGATACGTACCACA +
Preference number: 4 (lower is better)
Translates to: PSGISQCPERSVCLPTDGSLSNT*FQIRTT
Trigger: TGTGGTACGTATCTGAAAGCAAGTGTTAGAGAGGGA...CCCATCTGTAGGTAGACACACAGATCGCTCAGGGCACTGAGAGATCCCAGAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355854.8
ENST00000610540.4
CDS-3UTR GCA 90 bp ATGACACACTGTACAAACTGGACAAATGAGACGACTGACTGTGACAGGGGCCGGTCACTAGCAGGCCACTaGTGTAGAGTTCTTGTGCTA +
Preference number: 4 (lower is better)
Translates to: MTHCTNWTNETTDCDRGRSLAGH*CRVLVL
Trigger: TAGCACAAGAACTCTACAGCAGTGGCCTGCTAGTGA...CCGGCCCCTGTCACAGTCAGTCGTCTCATTTGTCCAGTTTGTACAGTGTGTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000410043.5
ENST00000425242.5
ENST00000610540.4
CDS-3UTR GCA 90 bp TTACCTTCTGGGATCTCTCAGTGCCCTGAGCGATCTGTGTGTCTACCTACAGATCCTGGGAGGTGTGGATaGACTGATTACAGTCCAAAG +
Preference number: 4 (lower is better)
Translates to: LPSGISQCPERSVCLPTDPGRCG*TDYSPK
Trigger: CTTTGGACTGTAATCAGTGCATCCACACCTCCCAGG...ATCTGTAGGTAGACACACAGATCGCTCAGGGCACTGAGAGATCCCAGAAGGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409130.5
ENST00000409308.6
ENST00000610540.4
CDS-3UTR GCA 90 bp TACTCTAAAAGACACTTACAGCAGAAAGCATTCACCCATGACCATTATGAAGGATACGGGTCATCAGGCTaGCGGCCGGCCTCCTGCAAG +
Preference number: 4 (lower is better)
Translates to: YSKRHLQQKAFTHDHYEGYGSSG*RPASCK
Trigger: CTTGCAGGAGGCCGGCCGGCAGCCTGATGACCCGTA...TCCTTCATAATGGTCATGGGTGAATGCTTTCTGCTGTAAGTGTCTTTTAGAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR GCA 90 bp AGACTTGGTGATGCCTGTCAATTGAGCTCCCATTTAGCGGCTCATTGTGCCCAGAAAGGGGGAGCTTCCTaGTCCCCCTTTCACATTAAT +
Preference number: 4 (lower is better)
Translates to: RLGDACQLSSHLAAHCAQKGGAS*SPFHIN
Trigger: ATTAATGTGAAAGGGGGAGCAGGAAGCTCCCCCTTT...CTGGGCACAATGAGCCGCTAAATGGGAGCTCAATTGACAGGCATCACCAAGTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR CCA 90 bp CTTGGTGATGCCTGTCAATTGAGCTCCCATTTAGCGGCTCATTGTGCCCAGGGGTCCGTCCTTTCTTTTTaGAAGCTGCTCAGAAACTCA +
Preference number: 4 (lower is better)
Translates to: LGDACQLSSHLAAHCAQGSVLSF*KLLRNS
Trigger: TGAGTTTCTGAGCAGCTTCCAAAAAGAAAGGACGGA...CCCCTGGGCACAATGAGCCGCTAAATGGGAGCTCAATTGACAGGCATCACCAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409130.5
ENST00000409308.6
ENST00000610540.4
CDS-3UTR CCA 90 bp CACACTGTACAAACTGGACAAATGAGACGACTGACTGTGACAGGGGCCGGGGAGACACACTGTACAAACTaGACAAATGAGACGACTGAC +
Preference number: 4 (lower is better)
Translates to: HTVQTGQMRRLTVTGAGETHCTN*TNETTD
Trigger: GTCAGTCGTCTCATTTGTCCAGTTTGTACAGTGTGT...CTCCCCGGCCCCTGTCACAGTCAGTCGTCTCATTTGTCCAGTTTGTACAGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409130.5
ENST00000409308.6
ENST00000410043.5
ENST00000425242.5
ENST00000610540.4
CDS-3UTR CCA 90 bp CCTTCTGGGATCTCTCAGTGCCCTGAGCGATCTGTGTGTCTACCTACAGATGGGACACACTGTACAAACTaGACAAATGAGACGACTGAC +
Preference number: 4 (lower is better)
Translates to: PSGISQCPERSVCLPTDGTHCTN*TNETTD
Trigger: GTCAGTCGTCTCATTTGTCCAGTTTGTACAGTGTGT...CCCATCTGTAGGTAGACACACAGATCGCTCAGGGCACTGAGAGATCCCAGAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409130.5
ENST00000409308.6
ENST00000610540.4
CDS-3UTR CCA 90 bp CTGGGATCTCTCAGTGCCCTGAGCGATCTGTGTGTCTACCTACAGATGGGCAAAACAGTCCAAAGACATTaGCAGCAACAAAGGACACAC +
Preference number: 4 (lower is better)
Translates to: LGSLSALSDLCVYLQMGKTVQRH*QQQRTH
Trigger: GTGTGTCCTTTGTTGCTGCCAATGTCTTTGGACTGT...TTTGCCCATCTGTAGGTAGACACACAGATCGCTCAGGGCACTGAGAGATCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409130.5
ENST00000409308.6
ENST00000610540.4
CDS-3UTR CCA 90 bp TCTCTTCCCCTCTCTAGGCAGAGAAATACCTGGCTGAAGAAAAACTACACAACAGCTGAGAGGGAGCACTaGATCCTGGGAGGTGTGGAT +
Preference number: 4 (lower is better)
Translates to: SLPLSRQRNTWLKKNYTTAEREH*ILGGVD
Trigger: ATCCACACCTCCCAGGATCCAGTGCTCCCTCTCAGC...TGTTGTGTAGTTTTTCTTCAGCCAGGTATTTCTCTGCCTAGAGAGGGGAAGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR CCA 90 bp TTACCTTCTGGGATCTCTCAGTGCCCTGAGCGATCTGTGTGTCTACCTACAGATATGGTTTGTGCCTGCTaGGCATCCCACTATGCTGAT +
Preference number: 4 (lower is better)
Translates to: LPSGISQCPERSVCLPTDMVCAC*ASHYAD
Trigger: ATCAGCATAGTGGGATGCCCAGCAGGCACAAACCAT...ATCTGTAGGTAGACACACAGATCGCTCAGGGCACTGAGAGATCCCAGAAGGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR CCA 90 bp AAGCATTCACCCATGACCATTATGAAGGAAATATTCTGTCCCTCACTCACCCTCGACTCCCTGGACCCATaGTTTGTGCCTGCTGGGCAT +
Preference number: 4 (lower is better)
Translates to: KHSPMTIMKEIFCPSLTLDSLDP*FVPAGH
Trigger: ATGCCCAGCAGGCACAAACCATGGGTCCAGGGAGTC...GAGGGTGAGTGAGGGACAGAATATTTCCTTCATAATGGTCATGGGTGAATGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR CCA 90 bp ACTGTACAAACTGGACAAATGAGACGACTGACTGTGACAGGGGCCGGGGAGCTCGATCTACTATGTGCCTaGCACTATTGCAGACGTATT +
Preference number: 4 (lower is better)
Translates to: TVQTGQMRRLTVTGAGELDLLCA*HYCRRI
Trigger: AATACGTCTGCAATAGTGCCAGGCACATAGTAGATC...GAGCTCCCCGGCCCCTGTCACAGTCAGTCGTCTCATTTGTCCAGTTTGTACAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409130.5
CDS-3UTR TCA 90 bp CACACTGTACAAACTGGACAAATGAGACGACTGACTGTGACAGGGGCCGGGGAGAAGACAGCTCTTTCTTaGGCTCAAAGCACTTTAGAT +
Preference number: 4 (lower is better)
Translates to: HTVQTGQMRRLTVTGAGEKTALS*AQSTLD
Trigger: ATCTAAAGTGCTTTGAGCTCAAGAAAGAGCTGTCTT...CTCCCCGGCCCCTGTCACAGTCAGTCGTCTCATTTGTCCAGTTTGTACAGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355854.8
ENST00000410043.5
ENST00000610540.4
CDS-3UTR TCA 90 bp ACATTAACGTTACCTTCTGGGATCTCTCAGTGCCCTGAGCGATCTGTGTGTCTAGAAGGAGGTTCATCATaGGTTTCAGGTTCTCCGGCT +
Preference number: 4 (lower is better)
Translates to: TLTLPSGISQCPERSVCLEGGSS*VSGSPA
Trigger: AGCCGGAGAACCTGAAACTCATGATGAACCTCCTTC...TAGACACACAGATCGCTCAGGGCACTGAGAGATCCCAGAAGGTAACGTTAATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409130.5
ENST00000409308.6
ENST00000610540.4
CDS-3UTR TCA 90 bp GAAATGACACACTGTACAAACTGGACAAATGAGACGACTGACTGTGACAGGGGCGAAGGAGGTTCATCATaGGTTTCAGGTTCTCCGGCT +
Preference number: 4 (lower is better)
Translates to: EMTHCTNWTNETTDCDRGEGGSS*VSGSPA
Trigger: AGCCGGAGAACCTGAAACTCATGATGAACCTCCTTC...GCCCCTGTCACAGTCAGTCGTCTCATTTGTCCAGTTTGTACAGTGTGTCATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409130.5
ENST00000409308.6
ENST00000410043.5
ENST00000425242.5
ENST00000610540.4
CDS-3UTR TCA 90 bp ACATTAACGTTACCTTCTGGGATCTCTCAGTGCCCTGAGCGATCTGTGTGTCTAGAACTCAGTCCTCCTTaGAGACTTGGTGATGCCTGT +
Preference number: 4 (lower is better)
Translates to: TLTLPSGISQCPERSVCLELSPP*RLGDAC
Trigger: ACAGGCATCACCAAGTCTTCAAGGAGGACTGAGTTC...TAGACACACAGATCGCTCAGGGCACTGAGAGATCCCAGAAGGTAACGTTAATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409130.5
ENST00000409308.6
ENST00000610540.4
CDS-3UTR TCA 90 bp AGACTTGGTGATGCCTGTCAATTGAGCTCCCATTTAGCGGCTCATTGTGCCCAGCCCGTTTTAGATGGTTaGTGTCTGAAACGAAACCAC +
Preference number: 4 (lower is better)
Translates to: RLGDACQLSSHLAAHCAQPVLDG*CLKRNH
Trigger: GTGGTTTCGTTTCAGACATCAACCATCTAAAACGGG...CTGGGCACAATGAGCCGCTAAATGGGAGCTCAATTGACAGGCATCACCAAGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR TCA 90 bp TACCTTCTGGGATCTCTCAGTGCCCTGAGCGATCTGTGTGTCTACCTACAGATGCCCGTTTTAGATGGTTaGTGTCTGAAACGAAACCAC +
Preference number: 4 (lower is better)
Translates to: YLLGSLSALSDLCVYLQMPVLDG*CLKRNH
Trigger: GTGGTTTCGTTTCAGACATCAACCATCTAAAACGGG...CATCTGTAGGTAGACACACAGATCGCTCAGGGCACTGAGAGATCCCAGAAGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR GCA 90 bp ACTGTACAAACTGGACAAATGAGACGACTGACTGTGACAGGGGCCGGGGAGCTCAATTTCCACTCTCTTTaGTTGCTCTCAGATTCCAAG +
Preference number: 4 (lower is better)
Translates to: TVQTGQMRRLTVTGAGELNFHSL*LLSDSK
Trigger: CTTGGAATCTGAGAGCAAGCAAAGAGAGTGGAAATT...GAGCTCCCCGGCCCCTGTCACAGTCAGTCGTCTCATTTGTCCAGTTTGTACAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355854.8
ENST00000610540.4
CDS-3UTR GCA 90 bp TCACTCTATCCAGAGCCACATGTTCACAGTTCTCTAGCAAGCAGGTCACACCCCTCAAAGTCTATCAGCTaGAGGTCAGCTATCAGTGTC +
Preference number: 4 (lower is better)
Translates to: SLYPEPHVHSSLASRSHPSKSIS*RSAISV
Trigger: GACACTGATAGCTGACCTGCAGCTGATAGACTTTGA...GGGGTGTGACCTGCTTGCTAGAGAACTGTGAACATGTGGCTCTGGATAGAGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR GCA 90 bp AAGCATTCACCCATGACCATTATGAAGGAAATATTCTGTCCCTCACTCACCCTCTTTAGCGGCTCATTGTaGCCAGGGGCTCACATCTGC +
Preference number: 4 (lower is better)
Translates to: KHSPMTIMKEIFCPSLTLFSGSL*PGAHIC
Trigger: GCAGATGTGAGCCCCTGGGCACAATGAGCCGCTAAA...GAGGGTGAGTGAGGGACAGAATATTTCCTTCATAATGGTCATGGGTGAATGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR GCA 90 bp TCTCTTCCCCTCTCTAGGCAGAGAAATACCTGGCTGAAGAAAAACTACACAACACCAAGGGTGGTGCCCTaGCAGGTAACTCTTCAGGTA +
Preference number: 4 (lower is better)
Translates to: SLPLSRQRNTWLKKNYTTPRVVP*QVTLQV
Trigger: TACCTGAAGAGTTACCTGGCAGGGCACCACCCTTGG...TGTTGTGTAGTTTTTCTTCAGCCAGGTATTTCTCTGCCTAGAGAGGGGAAGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR GCA 90 bp AAGCATTCACCCATGACCATTATGAAGGAAATATTCTGTCCCTCACTCACCCTCCCAAGGGTGGTGCCCTaGCAGGTAACTCTTCAGGTA +
Preference number: 4 (lower is better)
Translates to: KHSPMTIMKEIFCPSLTLPRVVP*QVTLQV
Trigger: TACCTGAAGAGTTACCTGGCAGGGCACCACCCTTGG...GAGGGTGAGTGAGGGACAGAATATTTCCTTCATAATGGTCATGGGTGAATGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR GCA 90 bp TTACCTTCTGGGATCTCTCAGTGCCCTGAGCGATCTGTGTGTCTACCTACAGATAAAGGGGGAGCTTCCTaGTCCCCCTTTCACATTAAT +
Preference number: 4 (lower is better)
Translates to: LPSGISQCPERSVCLPTDKGGAS*SPFHIN
Trigger: ATTAATGTGAAAGGGGGAGCAGGAAGCTCCCCCTTT...ATCTGTAGGTAGACACACAGATCGCTCAGGGCACTGAGAGATCCCAGAAGGTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR CCA 90 bp CTGGGATCTCTCAGTGCCCTGAGCGATCTGTGTGTCTACCTACAGATGGGCAAATCCGTCCTTTCTTTTTaGAAGCTGCTCAGAAACTCA +
Preference number: 4 (lower is better)
Translates to: LGSLSALSDLCVYLQMGKSVLSF*KLLRNS
Trigger: TGAGTTTCTGAGCAGCTTCCAAAAAGAAAGGACGGA...TTTGCCCATCTGTAGGTAGACACACAGATCGCTCAGGGCACTGAGAGATCCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409130.5
ENST00000409308.6
ENST00000610540.4
CDS-3UTR CCA 90 bp AGACTTGGTGATGCCTGTCAATTGAGCTCCCATTTAGCGGCTCATTGTGCCCAGACAGTCCAAAGACATTaGCAGCAACAAAGGACACAC +
Preference number: 4 (lower is better)
Translates to: RLGDACQLSSHLAAHCAQTVQRH*QQQRTH
Trigger: GTGTGTCCTTTGTTGCTGCCAATGTCTTTGGACTGT...CTGGGCACAATGAGCCGCTAAATGGGAGCTCAATTGACAGGCATCACCAAGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409130.5
ENST00000409308.6
ENST00000610540.4
CDS-3UTR CCA 90 bp TCACTCTATCCAGAGCCACATGTTCACAGTTCTCTAGCAAGCAGGTCACACCCCCTCTGGAAGCTAATATaGAGCAGCAGTCACTCTATC +
Preference number: 4 (lower is better)
Translates to: SLYPEPHVHSSLASRSHPLWKLI*SSSHSI
Trigger: GATAGAGTGACTGCTGCTCCATATTAGCTTCCAGAG...GGGGTGTGACCTGCTTGCTAGAGAACTGTGAACATGTGGCTCTGGATAGAGTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR TCA 90 bp TCTGAAATGACACACTGTACAAACTGGACAAATGAGACGACTGACTGTGACAGGAGTTCTTGTGCTAGCTaGGCCACTGCTTCTGTTGGG +
Preference number: 4 (lower is better)
Translates to: SEMTHCTNWTNETTDCDRSSCAS*ATASVG
Trigger: CCCAACAGAAGCAGTGGCTCAGCTAGCACAAGAACT...CCTGTCACAGTCAGTCGTCTCATTTGTCCAGTTTGTACAGTGTGTCATTTCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000410043.5
ENST00000425242.5
ENST00000610540.4
CDS-3UTR TCA 90 bp AAGCATTCACCCATGACCATTATGAAGGAAATATTCTGTCCCTCACTCACCCTCATGATGGCAAAGTTGTaGCGGTCCAGGATCAGCTCC +
Preference number: 4 (lower is better)
Translates to: KHSPMTIMKEIFCPSLTLMMAKL*RSRISS
Trigger: GGAGCTGATCCTGGACCGTCACAACTTTGCCATCAT...GAGGGTGAGTGAGGGACAGAATATTTCCTTCATAATGGTCATGGGTGAATGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR TCA 90 bp TCTGAAATGACACACTGTACAAACTGGACAAATGAGACGACTGACTGTGACAGGATGATGGCAAAGTTGTaGCGGTCCAGGATCAGCTCC +
Preference number: 4 (lower is better)
Translates to: SEMTHCTNWTNETTDCDRMMAKL*RSRISS
Trigger: GGAGCTGATCCTGGACCGTCACAACTTTGCCATCAT...CCTGTCACAGTCAGTCGTCTCATTTGTCCAGTTTGTACAGTGTGTCATTTCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409130.5
ENST00000409308.6
ENST00000410043.5
ENST00000425242.5
ENST00000610540.4
CDS-3UTR TCA 90 bp GGCCTCACTCTCCAAAGGAAAACAGACGTCCCAAGATGTTGTGGAACAGTATTAATAGGCTGTGTTTTGTaGGGACTGGCCACAAACACC +
Preference number: 4 (lower is better)
Translates to: GLTLQRKTDVPRCCGTVLIGCVL*GLATNT
Trigger: GGTGTTTGTGGCCAGTCCTCACAAAACACAGCCTAT...TAATACTGTTCCACAACATCTTGGGACGTCTGTTTTCCTTTGGAGAGTGAGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR TCA 90 bp TTACCTTCTGGGATCTCTCAGTGCCCTGAGCGATCTGTGTGTCTACCTACAGATGAGGTGTGGATGCACTaGTTACAGTCCAAAGACATT +
Preference number: 4 (lower is better)
Translates to: LPSGISQCPERSVCLPTDEVWMH*LQSKDI
Trigger: AATGTCTTTGGACTGTAATCAGTGCATCCACACCTC...ATCTGTAGGTAGACACACAGATCGCTCAGGGCACTGAGAGATCCCAGAAGGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409130.5
ENST00000409308.6
ENST00000610540.4
CDS-3UTR TCA 90 bp ACTTACAGCAGAAAGCATTCACCCATGACCATTATGAAGGAAATATTCTGTCCCATAGAAGTTCCCCGCTaGGACTCCCTGGACCCATGG +
Preference number: 4 (lower is better)
Translates to: TYSRKHSPMTIMKEIFCPIEVPR*DSLDPW
Trigger: CCATGGGTCCAGGGAGTCTCAGCGGGGAACTTCTAT...GGGACAGAATATTTCCTTCATAATGGTCATGGGTGAATGCTTTCTGCTGTAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR TCA 90 bp TCTCTCAGTGCCCTGAGCGATCTGTGTGTCTACCTACAGATGGGCAAAGCATTTAATTCGAAGGGACTCTaGACTGTCAGGGAACGTTAT +
Preference number: 4 (lower is better)
Translates to: SLSALSDLCVYLQMGKAFNSKGL*TVRERY
Trigger: ATAACGTTCCCTGACAGTTCAGAGTCCCTTCGAATT...AAATGCTTTGCCCATCTGTAGGTAGACACACAGATCGCTCAGGGCACTGAGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR TCA 90 bp ACTGTACAAACTGGACAAATGAGACGACTGACTGTGACAGGGGCCGGGGAGCTCTTTCTTCTCAATATTTaGTGGATATCCGGAGGAAAC +
Preference number: 4 (lower is better)
Translates to: TVQTGQMRRLTVTGAGELFLLNI*WISGGN
Trigger: GTTTCCTCCGGATATCCATCAAATATTGAGAAGAAA...GAGCTCCCCGGCCCCTGTCACAGTCAGTCGTCTCATTTGTCCAGTTTGTACAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409308.6
ENST00000410043.5
CDS-3UTR GCA 90 bp ACATTAACGTTACCTTCTGGGATCTCTCAGTGCCCTGAGCGATCTGTGTGTCTAAAACCAGCTTGCTTATaGGTTCTCCACTCCCTCTCT +
Preference number: 4 (lower is better)
Translates to: TLTLPSGISQCPERSVCLKPACL*VLHSLS
Trigger: AGAGAGGGAGTGGAGAACGCATAAGCAAGCTGGTTT...TAGACACACAGATCGCTCAGGGCACTGAGAGATCCCAGAAGGTAACGTTAATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355854.8
ENST00000610540.4
CDS-3UTR GCA 90 bp GAAATGACACACTGTACAAACTGGACAAATGAGACGACTGACTGTGACAGGGGCTCACTAGCAGGCCACTaGTGTAGAGTTCTTGTGCTA +
Preference number: 4 (lower is better)
Translates to: EMTHCTNWTNETTDCDRGSLAGH*CRVLVL
Trigger: TAGCACAAGAACTCTACAGCAGTGGCCTGCTAGTGA...GCCCCTGTCACAGTCAGTCGTCTCATTTGTCCAGTTTGTACAGTGTGTCATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000410043.5
ENST00000425242.5
ENST00000610540.4
CDS-3UTR GCA 90 bp TCTCTCAGTGCCCTGAGCGATCTGTGTGTCTACCTACAGATGGGCAAAGCATTTTCAAAGTCTATCAGCTaGAGGTCAGCTATCAGTGTC +
Preference number: 4 (lower is better)
Translates to: SLSALSDLCVYLQMGKAFSKSIS*RSAISV
Trigger: GACACTGATAGCTGACCTGCAGCTGATAGACTTTGA...AAATGCTTTGCCCATCTGTAGGTAGACACACAGATCGCTCAGGGCACTGAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR GCA 90 bp GAAATGACACACTGTACAAACTGGACAAATGAGACGACTGACTGTGACAGGGGCTTCTCGTCAGCGAACTaGTCATCATCCGTCCTTTCT +
Preference number: 4 (lower is better)
Translates to: EMTHCTNWTNETTDCDRGFSSAN*SSSVLS
Trigger: AGAAAGGACGGATGATGAGCAGTTCGCTGACGAGAA...GCCCCTGTCACAGTCAGTCGTCTCATTTGTCCAGTTTGTACAGTGTGTCATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409130.5
ENST00000409308.6
ENST00000410043.5
ENST00000425242.5
ENST00000610540.4
CDS-3UTR GCA 90 bp CTCACAGTATTTACAGTGAACTTTGTGCAAACAAATCCCCCTTTGTGCAAAGGGTTTAGCGGCTCATTGTaGCCAGGGGCTCACATCTGC +
Preference number: 4 (lower is better)
Translates to: LTVFTVNFVQTNPPLCKGFSGSL*PGAHIC
Trigger: GCAGATGTGAGCCCCTGGGCACAATGAGCCGCTAAA...CCCTTTGCACAAAGGGGGATTTGTTTGCACAAAGTTCACTGTAAATACTGTGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR GCA 90 bp TCTCTTCCCCTCTCTAGGCAGAGAAATACCTGGCTGAAGAAAAACTACACAACATGGGCAAAGCATTTTTaGACCCTGGCCCCATTCCCA +
Preference number: 4 (lower is better)
Translates to: SLPLSRQRNTWLKKNYTTWAKHF*TLAPFP
Trigger: TGGGAATGGGGCCAGGGTGCAAAAATGCTTTGCCCA...TGTTGTGTAGTTTTTCTTCAGCCAGGTATTTCTCTGCCTAGAGAGGGGAAGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR GCA 90 bp TCTGAAATGACACACTGTACAAACTGGACAAATGAGACGACTGACTGTGACAGGTGGGCAAAGCATTTTTaGACCCTGGCCCCATTCCCA +
Preference number: 4 (lower is better)
Translates to: SEMTHCTNWTNETTDCDRWAKHF*TLAPFP
Trigger: TGGGAATGGGGCCAGGGTGCAAAAATGCTTTGCCCA...CCTGTCACAGTCAGTCGTCTCATTTGTCCAGTTTGTACAGTGTGTCATTTCAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409130.5
ENST00000409308.6
ENST00000610540.4
CDS-3UTR GCA 90 bp AAGCATTCACCCATGACCATTATGAAGGAAATATTCTGTCCCTCACTCACCCTCTGGGCAAAGCATTTTTaGACCCTGGCCCCATTCCCA +
Preference number: 4 (lower is better)
Translates to: KHSPMTIMKEIFCPSLTLWAKHF*TLAPFP
Trigger: TGGGAATGGGGCCAGGGTGCAAAAATGCTTTGCCCA...GAGGGTGAGTGAGGGACAGAATATTTCCTTCATAATGGTCATGGGTGAATGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR GCA 90 bp GAAATGACACACTGTACAAACTGGACAAATGAGACGACTGACTGTGACAGGGGCAAAGGGGGAGCTTCCTaGTCCCCCTTTCACATTAAT +
Preference number: 4 (lower is better)
Translates to: EMTHCTNWTNETTDCDRGKGGAS*SPFHIN
Trigger: ATTAATGTGAAAGGGGGAGCAGGAAGCTCCCCCTTT...GCCCCTGTCACAGTCAGTCGTCTCATTTGTCCAGTTTGTACAGTGTGTCATTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR GCA 90 bp ACTGTACAAACTGGACAAATGAGACGACTGACTGTGACAGGGGCCGGGGAGCTCTTAGTGCATTGCTCTTaGATGAAGAATGAACAAACC +
Preference number: 4 (lower is better)
Translates to: TVQTGQMRRLTVTGAGELLVHCS*MKNEQT
Trigger: GGTTTGTTCATTCTTCATGCAAGAGCAATGCACTAA...GAGCTCCCCGGCCCCTGTCACAGTCAGTCGTCTCATTTGTCCAGTTTGTACAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409308.6
ENST00000410043.5
CDS-3UTR CCA 90 bp ATGACACACTGTACAAACTGGACAAATGAGACGACTGACTGTGACAGGGGCCGGTCCTATTACCAAGCGTaGCAGAGAAAAGAGTTTCCA +
Preference number: 4 (lower is better)
Translates to: MTHCTNWTNETTDCDRGRSYYQA*QRKEFP
Trigger: TGGAAACTCTTTTCTCTGCCACGCTTGGTAATAGGA...CCGGCCCCTGTCACAGTCAGTCGTCTCATTTGTCCAGTTTGTACAGTGTGTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355854.8
CDS-3UTR CCA 90 bp CTTGGTGATGCCTGTCAATTGAGCTCCCATTTAGCGGCTCATTGTGCCCAGGGGGATGATTTTGGCAAGTaGTTCATGTCGAATACATTC +
Preference number: 4 (lower is better)
Translates to: LGDACQLSSHLAAHCAQGDDFGK*FMSNTF
Trigger: GAATGTATTCGACATGAACCACTTGCCAAAATCATC...CCCCTGGGCACAATGAGCCGCTAAATGGGAGCTCAATTGACAGGCATCACCAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409130.5
ENST00000409308.6
ENST00000610540.4
CDS-3UTR CCA 90 bp CACACTGTACAAACTGGACAAATGAGACGACTGACTGTGACAGGGGCCGGGGAGGATGATTTTGGCAAGTaGTTCATGTCGAATACATTC +
Preference number: 4 (lower is better)
Translates to: HTVQTGQMRRLTVTGAGEDDFGK*FMSNTF
Trigger: GAATGTATTCGACATGAACCACTTGCCAAAATCATC...CTCCCCGGCCCCTGTCACAGTCAGTCGTCTCATTTGTCCAGTTTGTACAGTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409130.5
ENST00000409308.6
ENST00000410043.5
ENST00000425242.5
ENST00000610540.4
CDS-3UTR CCA 90 bp TACCTTCTGGGATCTCTCAGTGCCCTGAGCGATCTGTGTGTCTACCTACAGATGTCCGTCCTTTCTTTTTaGAAGCTGCTCAGAAACTCA +
Preference number: 4 (lower is better)
Translates to: YLLGSLSALSDLCVYLQMSVLSF*KLLRNS
Trigger: TGAGTTTCTGAGCAGCTTCCAAAAAGAAAGGACGGA...CATCTGTAGGTAGACACACAGATCGCTCAGGGCACTGAGAGATCCCAGAAGGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409130.5
ENST00000409308.6
ENST00000610540.4
CDS-3UTR CCA 90 bp ATGACACACTGTACAAACTGGACAAATGAGACGACTGACTGTGACAGGGGCCGGTCCGTCCTTTCTTTTTaGAAGCTGCTCAGAAACTCA +
Preference number: 4 (lower is better)
Translates to: MTHCTNWTNETTDCDRGRSVLSF*KLLRNS
Trigger: TGAGTTTCTGAGCAGCTTCCAAAAAGAAAGGACGGA...CCGGCCCCTGTCACAGTCAGTCGTCTCATTTGTCCAGTTTGTACAGTGTGTCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409130.5
ENST00000409308.6
ENST00000410043.5
ENST00000425242.5
ENST00000610540.4
CDS-3UTR CCA 90 bp TCTGAAATGACACACTGTACAAACTGGACAAATGAGACGACTGACTGTGACAGGAGCATTTTTGCACCCTaGCCCCATTCCCAGTTCTCC +
Preference number: 4 (lower is better)
Translates to: SEMTHCTNWTNETTDCDRSIFAP*PHSQFS
Trigger: GGAGAACTGGGAATGGGGCCAGGGTGCAAAAATGCT...CCTGTCACAGTCAGTCGTCTCATTTGTCCAGTTTGTACAGTGTGTCATTTCAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409130.5
ENST00000409308.6
ENST00000610540.4
CDS-3UTR CCA 90 bp TCTCTCAGTGCCCTGAGCGATCTGTGTGTCTACCTACAGATGGGCAAAGCATTTACAGTCCAAAGACATTaGCAGCAACAAAGGACACAC +
Preference number: 4 (lower is better)
Translates to: SLSALSDLCVYLQMGKAFTVQRH*QQQRTH
Trigger: GTGTGTCCTTTGTTGCTGCCAATGTCTTTGGACTGT...AAATGCTTTGCCCATCTGTAGGTAGACACACAGATCGCTCAGGGCACTGAGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409130.5
ENST00000409308.6
ENST00000610540.4
CDS-3UTR CCA 90 bp TTACCTTCTGGGATCTCTCAGTGCCCTGAGCGATCTGTGTGTCTACCTACAGATCTCTGGAAGCTAATATaGAGCAGCAGTCACTCTATC +
Preference number: 4 (lower is better)
Translates to: LPSGISQCPERSVCLPTDLWKLI*SSSHSI
Trigger: GATAGAGTGACTGCTGCTCCATATTAGCTTCCAGAG...ATCTGTAGGTAGACACACAGATCGCTCAGGGCACTGAGAGATCCCAGAAGGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR CCA 90 bp AAGCATTCACCCATGACCATTATGAAGGAAATATTCTGTCCCTCACTCACCCTCCCCTCACTCACCCTCTaGAAGCTAATATGGAGCAGC +
Preference number: 4 (lower is better)
Translates to: KHSPMTIMKEIFCPSLTLPSLTL*KLIWSS
Trigger: GCTGCTCCATATTAGCTTCCAGAGGGTGAGTGAGGG...GAGGGTGAGTGAGGGACAGAATATTTCCTTCATAATGGTCATGGGTGAATGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR CCA 90 bp TTACCTTCTGGGATCTCTCAGTGCCCTGAGCGATCTGTGTGTCTACCTACAGATAAAGGGGATCAGTCCTaGAGAACACATTTCTCTTCC +
Preference number: 4 (lower is better)
Translates to: LPSGISQCPERSVCLPTDKGDQS*RTHFSS
Trigger: GGAAGAGAAATGTGTTCTCCAGGACTGATCCCCTTT...ATCTGTAGGTAGACACACAGATCGCTCAGGGCACTGAGAGATCCCAGAAGGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR CCA 90 bp TCTCTCAGTGCCCTGAGCGATCTGTGTGTCTACCTACAGATGGGCAAAGCATTTAAAGGGGATCAGTCCTaGAGAACACATTTCTCTTCC +
Preference number: 4 (lower is better)
Translates to: SLSALSDLCVYLQMGKAFKGDQS*RTHFSS
Trigger: GGAAGAGAAATGTGTTCTCCAGGACTGATCCCCTTT...AAATGCTTTGCCCATCTGTAGGTAGACACACAGATCGCTCAGGGCACTGAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR CCA 90 bp TCTGAAATGACACACTGTACAAACTGGACAAATGAGACGACTGACTGTGACAGGGTTCCTAACAGGCCATaGACAGGTACAGGTCTGCAG +
Preference number: 4 (lower is better)
Translates to: SEMTHCTNWTNETTDCDRVPNRP*TGTGLQ
Trigger: CTGCAGACCTGTACCTGTCCATGGCCTGTTAGGAAC...CCTGTCACAGTCAGTCGTCTCATTTGTCCAGTTTGTACAGTGTGTCATTTCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000347776.9
ENST00000610540.4
CDS-3UTR CCA 90 bp ATGACACACTGTACAAACTGGACAAATGAGACGACTGACTGTGACAGGGGCCGGTCTCTTCTTCCAATATaGAATGCTCCTACTGTGCTG +
Preference number: 4 (lower is better)
Translates to: MTHCTNWTNETTDCDRGRSLLPI*NAPTVL
Trigger: CAGCACAGTAGGAGCATTCCATATTGGAAGAAGAGA...CCGGCCCCTGTCACAGTCAGTCGTCTCATTTGTCCAGTTTGTACAGTGTGTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000347776.9
CDS-3UTR TCA 90 bp TCACTCTATCCAGAGCCACATGTTCACAGTTCTCTAGCAAGCAGGTCACACCCCTCAAAGCACTTTAGATaGAGTAGCCTTTATCGTCCA +
Preference number: 4 (lower is better)
Translates to: SLYPEPHVHSSLASRSHPSKHFR*SSLYRP
Trigger: TGGACGATAAAGGCTACTTCATCTAAAGTGCTTTGA...GGGGTGTGACCTGCTTGCTAGAGAACTGTGAACATGTGGCTCTGGATAGAGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355854.8
ENST00000610540.4
CDS-3UTR TCA 90 bp AAGCATTCACCCATGACCATTATGAAGGAAATATTCTGTCCCTCACTCACCCTCCACATGGTGAGGTGCTaGAGACAGCTCTTTCTTGAG +
Preference number: 4 (lower is better)
Translates to: KHSPMTIMKEIFCPSLTLHMVRC*RQLFLE
Trigger: CTCAAGAAAGAGCTGTCTTCAGCACCTCACCATGTG...GAGGGTGAGTGAGGGACAGAATATTTCCTTCATAATGGTCATGGGTGAATGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355854.8
ENST00000610540.4
CDS-3UTR TCA 90 bp CTCACAGTATTTACAGTGAACTTTGTGCAAACAAATCCCCCTTTGTGCAAAGGGAGTTCTTGTGCTAGCTaGGCCACTGCTTCTGTTGGG +
Preference number: 4 (lower is better)
Translates to: LTVFTVNFVQTNPPLCKGSSCAS*ATASVG
Trigger: CCCAACAGAAGCAGTGGCTCAGCTAGCACAAGAACT...CCCTTTGCACAAAGGGGGATTTGTTTGCACAAAGTTCACTGTAAATACTGTGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR TCA 90 bp TCTGAAATGACACACTGTACAAACTGGACAAATGAGACGACTGACTGTGACAGGATAGGCTGTGTTTTGTaGGGACTGGCCACAAACACC +
Preference number: 4 (lower is better)
Translates to: SEMTHCTNWTNETTDCDRIGCVL*GLATNT
Trigger: GGTGTTTGTGGCCAGTCCTCACAAAACACAGCCTAT...CCTGTCACAGTCAGTCGTCTCATTTGTCCAGTTTGTACAGTGTGTCATTTCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409130.5
ENST00000409308.6
ENST00000410043.5
ENST00000425242.5
ENST00000610540.4
CDS-3UTR TCA 90 bp ACATTAACGTTACCTTCTGGGATCTCTCAGTGCCCTGAGCGATCTGTGTGTCTAGAGGTGTGGATGCACTaGTTACAGTCCAAAGACATT +
Preference number: 4 (lower is better)
Translates to: TLTLPSGISQCPERSVCLEVWMH*LQSKDI
Trigger: AATGTCTTTGGACTGTAATCAGTGCATCCACACCTC...TAGACACACAGATCGCTCAGGGCACTGAGAGATCCCAGAAGGTAACGTTAATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409130.5
ENST00000409308.6
ENST00000610540.4
CDS-3UTR TCA 90 bp GAAATGACACACTGTACAAACTGGACAAATGAGACGACTGACTGTGACAGGGGCGAGGTGTGGATGCACTaGTTACAGTCCAAAGACATT +
Preference number: 4 (lower is better)
Translates to: EMTHCTNWTNETTDCDRGEVWMH*LQSKDI
Trigger: AATGTCTTTGGACTGTAATCAGTGCATCCACACCTC...GCCCCTGTCACAGTCAGTCGTCTCATTTGTCCAGTTTGTACAGTGTGTCATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409130.5
ENST00000409308.6
ENST00000610540.4
CDS-3UTR TCA 90 bp TCTCTCAGTGCCCTGAGCGATCTGTGTGTCTACCTACAGATGGGCAAAGCATTTTGCATTGCTCTTGCATaGAGAATGAACAAACCACTG +
Preference number: 4 (lower is better)
Translates to: SLSALSDLCVYLQMGKAFCIALA*RMNKPL
Trigger: CAGTGGTTTGTTCATTCTTCATGCAAGAGCAATGCA...AAATGCTTTGCCCATCTGTAGGTAGACACACAGATCGCTCAGGGCACTGAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409308.6
CDS-3UTR GCA 90 bp TCTCTCAGTGCCCTGAGCGATCTGTGTGTCTACCTACAGATGGGCAAAGCATTTTCCCTCTCTAACACTTaGTTTCAGATACGTACCACA +
Preference number: 4 (lower is better)
Translates to: SLSALSDLCVYLQMGKAFSLSNT*FQIRTT
Trigger: TGTGGTACGTATCTGAAAGCAAGTGTTAGAGAGGGA...AAATGCTTTGCCCATCTGTAGGTAGACACACAGATCGCTCAGGGCACTGAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355854.8
ENST00000610540.4
CDS-3UTR GCA 90 bp CACACTGTACAAACTGGACAAATGAGACGACTGACTGTGACAGGGGCCGGGGAGTCTTCCAATATGGAATaGAAATGTTACAGAAATGCC +
Preference number: 4 (lower is better)
Translates to: HTVQTGQMRRLTVTGAGESSNME*KCYRNA
Trigger: GGCATTTCTGTAACATTTGCATTCCATATTGGAAGA...CTCCCCGGCCCCTGTCACAGTCAGTCGTCTCATTTGTCCAGTTTGTACAGTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355854.8
ENST00000410043.5
ENST00000610540.4
CDS-3UTR GCA 90 bp GAAATGACACACTGTACAAACTGGACAAATGAGACGACTGACTGTGACAGGGGCTCAAAGTCTATCAGCTaGAGGTCAGCTATCAGTGTC +
Preference number: 4 (lower is better)
Translates to: EMTHCTNWTNETTDCDRGSKSIS*RSAISV
Trigger: GACACTGATAGCTGACCTGCAGCTGATAGACTTTGA...GCCCCTGTCACAGTCAGTCGTCTCATTTGTCCAGTTTGTACAGTGTGTCATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000410043.5
ENST00000425242.5
ENST00000610540.4
CDS-3UTR GCA 90 bp CTCACAGTATTTACAGTGAACTTTGTGCAAACAAATCCCCCTTTGTGCAAAGGGTGGGCAAAGCATTTTTaGACCCTGGCCCCATTCCCA +
Preference number: 4 (lower is better)
Translates to: LTVFTVNFVQTNPPLCKGWAKHF*TLAPFP
Trigger: TGGGAATGGGGCCAGGGTGCAAAAATGCTTTGCCCA...CCCTTTGCACAAAGGGGGATTTGTTTGCACAAAGTTCACTGTAAATACTGTGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR GCA 90 bp CTTTCTGAAATGACACACTGTACAAACTGGACAAATGAGACGACTGACTGTGACTCTGGGATCTCTCAGTaGCCTGAGCGATCTGTGTGT +
Preference number: 4 (lower is better)
Translates to: LSEMTHCTNWTNETTDCDSGISQ*PERSVC
Trigger: ACACACAGATCGCTCAGGGCACTGAGAGATCCCAGA...GTCACAGTCAGTCGTCTCATTTGTCCAGTTTGTACAGTGTGTCATTTCAGAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409130.5
ENST00000409308.6
ENST00000610540.4
CDS-3UTR GCA 90 bp CTCACAGTATTTACAGTGAACTTTGTGCAAACAAATCCCCCTTTGTGCAAAGGGACAAATCCCCCTTTGTaGAAAGGGGGAGCTTCCTGC +
Preference number: 4 (lower is better)
Translates to: LTVFTVNFVQTNPPLCKGTNPPL*KGGASC
Trigger: GCAGGAAGCTCCCCCTTTGCACAAAGGGGGATTTGT...CCCTTTGCACAAAGGGGGATTTGTTTGCACAAAGTTCACTGTAAATACTGTGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR CCA 90 bp TTACCTTCTGGGATCTCTCAGTGCCCTGAGCGATCTGTGTGTCTACCTACAGATACACACTGTACAAACTaGACAAATGAGACGACTGAC +
Preference number: 4 (lower is better)
Translates to: LPSGISQCPERSVCLPTDTHCTN*TNETTD
Trigger: GTCAGTCGTCTCATTTGTCCAGTTTGTACAGTGTGT...ATCTGTAGGTAGACACACAGATCGCTCAGGGCACTGAGAGATCCCAGAAGGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409130.5
ENST00000409308.6
ENST00000610540.4
CDS-3UTR CCA 90 bp TACTCTAAAAGACACTTACAGCAGAAAGCATTCACCCATGACCATTATGAAGGAGCCATGCTGAGGAGCTaGGATGGAATGCAGGACAGG +
Preference number: 4 (lower is better)
Translates to: YSKRHLQQKAFTHDHYEGAMLRS*DGMQDR
Trigger: CCTGTCCTGCATTCCATCCCAGCTCCTCAGCATGGC...TCCTTCATAATGGTCATGGGTGAATGCTTTCTGCTGTAAGTGTCTTTTAGAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR CCA 90 bp AAGCATTCACCCATGACCATTATGAAGGAAATATTCTGTCCCTCACTCACCCTCATGGTTTGTGCCTGCTaGGCATCCCACTATGCTGAT +
Preference number: 4 (lower is better)
Translates to: KHSPMTIMKEIFCPSLTLMVCAC*ASHYAD
Trigger: ATCAGCATAGTGGGATGCCCAGCAGGCACAAACCAT...GAGGGTGAGTGAGGGACAGAATATTTCCTTCATAATGGTCATGGGTGAATGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR CCA 90 bp CACACTGTACAAACTGGACAAATGAGACGACTGACTGTGACAGGGGCCGGGGAGAAATCCCGTTTTAGATaGTTGATGTCTGAAACGAAA +
Preference number: 4 (lower is better)
Translates to: HTVQTGQMRRLTVTGAGEKSRFR*LMSETK
Trigger: TTTCGTTTCAGACATCAACCATCTAAAACGGGATTT...CTCCCCGGCCCCTGTCACAGTCAGTCGTCTCATTTGTCCAGTTTGTACAGTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR TCA 90 bp TCTCTCAGTGCCCTGAGCGATCTGTGTGTCTACCTACAGATGGGCAAAGCATTTAAGACAGCTCTTTCTTaGGCTCAAAGCACTTTAGAT +
Preference number: 4 (lower is better)
Translates to: SLSALSDLCVYLQMGKAFKTALS*AQSTLD
Trigger: ATCTAAAGTGCTTTGAGCTCAAGAAAGAGCTGTCTT...AAATGCTTTGCCCATCTGTAGGTAGACACACAGATCGCTCAGGGCACTGAGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355854.8
ENST00000610540.4
CDS-3UTR TCA 90 bp CTCACAGTATTTACAGTGAACTTTGTGCAAACAAATCCCCCTTTGTGCAAAGGGGAAGGAGGTTCATCATaGGTTTCAGGTTCTCCGGCT +
Preference number: 4 (lower is better)
Translates to: LTVFTVNFVQTNPPLCKGEGGSS*VSGSPA
Trigger: AGCCGGAGAACCTGAAACTCATGATGAACCTCCTTC...CCCTTTGCACAAAGGGGGATTTGTTTGCACAAAGTTCACTGTAAATACTGTGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR TCA 90 bp TCTCTCAGTGCCCTGAGCGATCTGTGTGTCTACCTACAGATGGGCAAAGCATTTAGAGAAATACCTGGCTaGAGAAAAACTACACAACAC +
Preference number: 4 (lower is better)
Translates to: SLSALSDLCVYLQMGKAFREIPG*RKTTQH
Trigger: GTGTTGTGTAGTTTTTCTTCAGCCAGGTATTTCTCT...AAATGCTTTGCCCATCTGTAGGTAGACACACAGATCGCTCAGGGCACTGAGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR TCA 90 bp GGCCTCACTCTCCAAAGGAAAACAGACGTCCCAAGATGTTGTGGAACAGTATTAAATTCGAAGGGACTCTaGACTGTCAGGGAACGTTAT +
Preference number: 4 (lower is better)
Translates to: GLTLQRKTDVPRCCGTVLNSKGL*TVRERY
Trigger: ATAACGTTCCCTGACAGTTCAGAGTCCCTTCGAATT...TAATACTGTTCCACAACATCTTGGGACGTCTGTTTTCCTTTGGAGAGTGAGGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR TCA 90 bp GAAATGACACACTGTACAAACTGGACAAATGAGACGACTGACTGTGACAGGGGCGCATTAAGCAACTCTTaGTTGGTGTTTTCAGAAGCC +
Preference number: 4 (lower is better)
Translates to: EMTHCTNWTNETTDCDRGALSNS*LVFSEA
Trigger: GGCTTCTGAAAACACCAATCAAGAGTTGCTTAATGC...GCCCCTGTCACAGTCAGTCGTCTCATTTGTCCAGTTTGTACAGTGTGTCATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000347776.9
ENST00000610540.4
CDS-3UTR GCA 90 bp AAGCATTCACCCATGACCATTATGAAGGAAATATTCTGTCCCTCACTCACCCTCAAACCAGCTTGCTTATaGGTTCTCCACTCCCTCTCT +
Preference number: 4 (lower is better)
Translates to: KHSPMTIMKEIFCPSLTLKPACL*VLHSLS
Trigger: AGAGAGGGAGTGGAGAACGCATAAGCAAGCTGGTTT...GAGGGTGAGTGAGGGACAGAATATTTCCTTCATAATGGTCATGGGTGAATGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355854.8
ENST00000610540.4
CDS-3UTR GCA 90 bp ACATTAACGTTACCTTCTGGGATCTCTCAGTGCCCTGAGCGATCTGTGTGTCTACCATTTAATAGAGGTTaGCTCCTATTACCAAGCGTG +
Preference number: 4 (lower is better)
Translates to: TLTLPSGISQCPERSVCLPFNRG*LLLPSV
Trigger: CACGCTTGGTAATAGGAGGCAACCTCTATTAAATGG...TAGACACACAGATCGCTCAGGGCACTGAGAGATCCCAGAAGGTAACGTTAATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355854.8
CDS-3UTR GCA 90 bp GGCCTCACTCTCCAAAGGAAAACAGACGTCCCAAGATGTTGTGGAACAGTATTATCAAAGTCTATCAGCTaGAGGTCAGCTATCAGTGTC +
Preference number: 4 (lower is better)
Translates to: GLTLQRKTDVPRCCGTVLSKSIS*RSAISV
Trigger: GACACTGATAGCTGACCTGCAGCTGATAGACTTTGA...TAATACTGTTCCACAACATCTTGGGACGTCTGTTTTCCTTTGGAGAGTGAGGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR GCA 90 bp TCTGAAATGACACACTGTACAAACTGGACAAATGAGACGACTGACTGTGACAGGTTCTCGTCAGCGAACTaGTCATCATCCGTCCTTTCT +
Preference number: 4 (lower is better)
Translates to: SEMTHCTNWTNETTDCDRFSSAN*SSSVLS
Trigger: AGAAAGGACGGATGATGAGCAGTTCGCTGACGAGAA...CCTGTCACAGTCAGTCGTCTCATTTGTCCAGTTTGTACAGTGTGTCATTTCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409130.5
ENST00000409308.6
ENST00000410043.5
ENST00000425242.5
ENST00000610540.4
CDS-3UTR GCA 90 bp TACTCTAAAAGACACTTACAGCAGAAAGCATTCACCCATGACCATTATGAAGGACTGCCTCGGGGTCCATaGCAGGCAAGAAAGAAACAC +
Preference number: 4 (lower is better)
Translates to: YSKRHLQQKAFTHDHYEGLPRGP*QARKKH
Trigger: GTGTTTCTTTCTTGCCTGGCATGGACCCCGAGGCAG...TCCTTCATAATGGTCATGGGTGAATGCTTTCTGCTGTAAGTGTCTTTTAGAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR GCA 90 bp TCTCTTCCCCTCTCTAGGCAGAGAAATACCTGGCTGAAGAAAAACTACACAACAAAAGGGGGAGCTTCCTaGTCCCCCTTTCACATTAAT +
Preference number: 4 (lower is better)
Translates to: SLPLSRQRNTWLKKNYTTKGGAS*SPFHIN
Trigger: ATTAATGTGAAAGGGGGAGCAGGAAGCTCCCCCTTT...TGTTGTGTAGTTTTTCTTCAGCCAGGTATTTCTCTGCCTAGAGAGGGGAAGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 23 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR GCA 90 bp ACTTACAGCAGAAAGCATTCACCCATGACCATTATGAAGGAAATATTCTGTCCCACAAATCCCCCTTTGTaGAAAGGGGGAGCTTCCTGC +
Preference number: 4 (lower is better)
Translates to: TYSRKHSPMTIMKEIFCPTNPPL*KGGASC
Trigger: GCAGGAAGCTCCCCCTTTGCACAAAGGGGGATTTGT...GGGACAGAATATTTCCTTCATAATGGTCATGGGTGAATGCTTTCTGCTGTAAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR GCA 90 bp TACCTTCTGGGATCTCTCAGTGCCCTGAGCGATCTGTGTGTCTACCTACAGATGTTAGTGCATTGCTCTTaGATGAAGAATGAACAAACC +
Preference number: 4 (lower is better)
Translates to: YLLGSLSALSDLCVYLQMLVHCS*MKNEQT
Trigger: GGTTTGTTCATTCTTCATGCAAGAGCAATGCACTAA...CATCTGTAGGTAGACACACAGATCGCTCAGGGCACTGAGAGATCCCAGAAGGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409308.6
CDS-3UTR CCA 90 bp TCTCTTCCCCTCTCTAGGCAGAGAAATACCTGGCTGAAGAAAAACTACACAACAAGCCACTGCTTCTGTTaGGGGTTCTTTCTCGTTTGT +
Preference number: 4 (lower is better)
Translates to: SLPLSRQRNTWLKKNYTTSHCFC*GFFLVC
Trigger: ACAAACGAGAAAGAACCCCCAACAGAAGCAGTGGCT...TGTTGTGTAGTTTTTCTTCAGCCAGGTATTTCTCTGCCTAGAGAGGGGAAGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR CCA 90 bp ACATTAACGTTACCTTCTGGGATCTCTCAGTGCCCTGAGCGATCTGTGTGTCTATCCGTCCTTTCTTTTTaGAAGCTGCTCAGAAACTCA +
Preference number: 4 (lower is better)
Translates to: TLTLPSGISQCPERSVCLSVLSF*KLLRNS
Trigger: TGAGTTTCTGAGCAGCTTCCAAAAAGAAAGGACGGA...TAGACACACAGATCGCTCAGGGCACTGAGAGATCCCAGAAGGTAACGTTAATGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409130.5
ENST00000409308.6
ENST00000610540.4
CDS-3UTR CCA 90 bp GAAATGACACACTGTACAAACTGGACAAATGAGACGACTGACTGTGACAGGGGCTCCGTCCTTTCTTTTTaGAAGCTGCTCAGAAACTCA +
Preference number: 4 (lower is better)
Translates to: EMTHCTNWTNETTDCDRGSVLSF*KLLRNS
Trigger: TGAGTTTCTGAGCAGCTTCCAAAAAGAAAGGACGGA...GCCCCTGTCACAGTCAGTCGTCTCATTTGTCCAGTTTGTACAGTGTGTCATTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409130.5
ENST00000409308.6
ENST00000410043.5
ENST00000425242.5
ENST00000610540.4
CDS-3UTR CCA 90 bp GAAATGACACACTGTACAAACTGGACAAATGAGACGACTGACTGTGACAGGGGCACACACTGTACAAACTaGACAAATGAGACGACTGAC +
Preference number: 4 (lower is better)
Translates to: EMTHCTNWTNETTDCDRGTHCTN*TNETTD
Trigger: GTCAGTCGTCTCATTTGTCCAGTTTGTACAGTGTGT...GCCCCTGTCACAGTCAGTCGTCTCATTTGTCCAGTTTGTACAGTGTGTCATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409130.5
ENST00000409308.6
ENST00000410043.5
ENST00000425242.5
ENST00000610540.4
CDS-3UTR CCA 90 bp ACTTACAGCAGAAAGCATTCACCCATGACCATTATGAAGGAAATATTCTGTCCCAGCATTTTTGCACCCTaGCCCCATTCCCAGTTCTCC +
Preference number: 4 (lower is better)
Translates to: TYSRKHSPMTIMKEIFCPSIFAP*PHSQFS
Trigger: GGAGAACTGGGAATGGGGCCAGGGTGCAAAAATGCT...GGGACAGAATATTTCCTTCATAATGGTCATGGGTGAATGCTTTCTGCTGTAAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR CCA 90 bp CTGGGATCTCTCAGTGCCCTGAGCGATCTGTGTGTCTACCTACAGATGGGCAAAAAATCCCGTTTTAGATaGTTGATGTCTGAAACGAAA +
Preference number: 4 (lower is better)
Translates to: LGSLSALSDLCVYLQMGKKSRFR*LMSETK
Trigger: TTTCGTTTCAGACATCAACCATCTAAAACGGGATTT...TTTGCCCATCTGTAGGTAGACACACAGATCGCTCAGGGCACTGAGAGATCCCAG
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR TCA 90 bp GAAATGACACACTGTACAAACTGGACAAATGAGACGACTGACTGTGACAGGGGCTCAAAGCACTTTAGATaGAGTAGCCTTTATCGTCCA +
Preference number: 4 (lower is better)
Translates to: EMTHCTNWTNETTDCDRGSKHFR*SSLYRP
Trigger: TGGACGATAAAGGCTACTTCATCTAAAGTGCTTTGA...GCCCCTGTCACAGTCAGTCGTCTCATTTGTCCAGTTTGTACAGTGTGTCATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355854.8
ENST00000410043.5
ENST00000610540.4
CDS-3UTR TCA 90 bp ACTTACAGCAGAAAGCATTCACCCATGACCATTATGAAGGAAATATTCTGTCCCCACATGGTGAGGTGCTaGAGACAGCTCTTTCTTGAG +
Preference number: 4 (lower is better)
Translates to: TYSRKHSPMTIMKEIFCPHMVRC*RQLFLE
Trigger: CTCAAGAAAGAGCTGTCTTCAGCACCTCACCATGTG...GGGACAGAATATTTCCTTCATAATGGTCATGGGTGAATGCTTTCTGCTGTAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355854.8
ENST00000610540.4
CDS-3UTR TCA 90 bp AAGCATTCACCCATGACCATTATGAAGGAAATATTCTGTCCCTCACTCACCCTCAATTCGAAGGGACTCTaGACTGTCAGGGAACGTTAT +
Preference number: 4 (lower is better)
Translates to: KHSPMTIMKEIFCPSLTLNSKGL*TVRERY
Trigger: ATAACGTTCCCTGACAGTTCAGAGTCCCTTCGAATT...GAGGGTGAGTGAGGGACAGAATATTTCCTTCATAATGGTCATGGGTGAATGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR GCA 90 bp TACCTTCTGGGATCTCTCAGTGCCCTGAGCGATCTGTGTGTCTACCTACAGATGTCTTCCAATATGGAATaGAAATGTTACAGAAATGCC +
Preference number: 4 (lower is better)
Translates to: YLLGSLSALSDLCVYLQMSSNME*KCYRNA
Trigger: GGCATTTCTGTAACATTTGCATTCCATATTGGAAGA...CATCTGTAGGTAGACACACAGATCGCTCAGGGCACTGAGAGATCCCAGAAGGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355854.8
ENST00000610540.4
CDS-3UTR GCA 90 bp CTCACAGTATTTACAGTGAACTTTGTGCAAACAAATCCCCCTTTGTGCAAAGGGTTCTCGTCAGCGAACTaGTCATCATCCGTCCTTTCT +
Preference number: 4 (lower is better)
Translates to: LTVFTVNFVQTNPPLCKGFSSAN*SSSVLS
Trigger: AGAAAGGACGGATGATGAGCAGTTCGCTGACGAGAA...CCCTTTGCACAAAGGGGGATTTGTTTGCACAAAGTTCACTGTAAATACTGTGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR CCA 90 bp TCACTCTATCCAGAGCCACATGTTCACAGTTCTCTAGCAAGCAGGTCACACCCCAGTAACAGTTACCACTaGAAAACGTTACCAGAAAAT +
Preference number: 4 (lower is better)
Translates to: SLYPEPHVHSSLASRSHPSNSYH*KTLPEN
Trigger: ATTTTCTGGTAACGTTTTCCAGTGGTAACTGTTACT...GGGGTGTGACCTGCTTGCTAGAGAACTGTGAACATGTGGCTCTGGATAGAGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000355854.8
CDS-3UTR CCA 90 bp TCTCTTCCCCTCTCTAGGCAGAGAAATACCTGGCTGAAGAAAAACTACACAACACTCTGGAAGCTAATATaGAGCAGCAGTCACTCTATC +
Preference number: 4 (lower is better)
Translates to: SLPLSRQRNTWLKKNYTTLWKLI*SSSHSI
Trigger: GATAGAGTGACTGCTGCTCCATATTAGCTTCCAGAG...TGTTGTGTAGTTTTTCTTCAGCCAGGTATTTCTCTGCCTAGAGAGGGGAAGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR CCA 90 bp TCACTCTATCCAGAGCCACATGTTCACAGTTCTCTAGCAAGCAGGTCACACCCCAAATCCCGTTTTAGATaGTTGATGTCTGAAACGAAA +
Preference number: 4 (lower is better)
Translates to: SLYPEPHVHSSLASRSHPKSRFR*LMSETK
Trigger: TTTCGTTTCAGACATCAACCATCTAAAACGGGATTT...GGGGTGTGACCTGCTTGCTAGAGAACTGTGAACATGTGGCTCTGGATAGAGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR CCA 90 bp AAGCATTCACCCATGACCATTATGAAGGAAATATTCTGTCCCTCACTCACCCTCAAAGGGGATCAGTCCTaGAGAACACATTTCTCTTCC +
Preference number: 4 (lower is better)
Translates to: KHSPMTIMKEIFCPSLTLKGDQS*RTHFSS
Trigger: GGAAGAGAAATGTGTTCTCCAGGACTGATCCCCTTT...GAGGGTGAGTGAGGGACAGAATATTTCCTTCATAATGGTCATGGGTGAATGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR TCA 90 bp GGCCTCACTCTCCAAAGGAAAACAGACGTCCCAAGATGTTGTGGAACAGTATTAAAGACAGCTCTTTCTTaGGCTCAAAGCACTTTAGAT +
Preference number: 4 (lower is better)
Translates to: GLTLQRKTDVPRCCGTVLKTALS*AQSTLD
Trigger: ATCTAAAGTGCTTTGAGCTCAAGAAAGAGCTGTCTT...TAATACTGTTCCACAACATCTTGGGACGTCTGTTTTCCTTTGGAGAGTGAGGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355854.8
ENST00000610540.4
CDS-3UTR TCA 90 bp TCTGAAATGACACACTGTACAAACTGGACAAATGAGACGACTGACTGTGACAGGTGCATTGCTCTTGCATaGAGAATGAACAAACCACTG +
Preference number: 4 (lower is better)
Translates to: SEMTHCTNWTNETTDCDRCIALA*RMNKPL
Trigger: CAGTGGTTTGTTCATTCTTCATGCAAGAGCAATGCA...CCTGTCACAGTCAGTCGTCTCATTTGTCCAGTTTGTACAGTGTGTCATTTCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409308.6
ENST00000410043.5
CDS-3UTR CCA 90 bp ACATTAACGTTACCTTCTGGGATCTCTCAGTGCCCTGAGCGATCTGTGTGTCTAGATGATTTTGGCAAGTaGTTCATGTCGAATACATTC +
Preference number: 4 (lower is better)
Translates to: TLTLPSGISQCPERSVCLDDFGK*FMSNTF
Trigger: GAATGTATTCGACATGAACCACTTGCCAAAATCATC...TAGACACACAGATCGCTCAGGGCACTGAGAGATCCCAGAAGGTAACGTTAATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409130.5
ENST00000409308.6
ENST00000610540.4
CDS-3UTR CCA 90 bp AAGCATTCACCCATGACCATTATGAAGGAAATATTCTGTCCCTCACTCACCCTCTCCGTCCTTTCTTTTTaGAAGCTGCTCAGAAACTCA +
Preference number: 4 (lower is better)
Translates to: KHSPMTIMKEIFCPSLTLSVLSF*KLLRNS
Trigger: TGAGTTTCTGAGCAGCTTCCAAAAAGAAAGGACGGA...GAGGGTGAGTGAGGGACAGAATATTTCCTTCATAATGGTCATGGGTGAATGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR CCA 90 bp TCTCTTCCCCTCTCTAGGCAGAGAAATACCTGGCTGAAGAAAAACTACACAACAACACACTGTACAAACTaGACAAATGAGACGACTGAC +
Preference number: 4 (lower is better)
Translates to: SLPLSRQRNTWLKKNYTTTHCTN*TNETTD
Trigger: GTCAGTCGTCTCATTTGTCCAGTTTGTACAGTGTGT...TGTTGTGTAGTTTTTCTTCAGCCAGGTATTTCTCTGCCTAGAGAGGGGAAGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR TCA 90 bp ACTTACAGCAGAAAGCATTCACCCATGACCATTATGAAGGAAATATTCTGTCCCCCCGTTTTAGATGGTTaGTGTCTGAAACGAAACCAC +
Preference number: 4 (lower is better)
Translates to: TYSRKHSPMTIMKEIFCPPVLDG*CLKRNH
Trigger: GTGGTTTCGTTTCAGACATCAACCATCTAAAACGGG...GGGACAGAATATTTCCTTCATAATGGTCATGGGTGAATGCTTTCTGCTGTAAGT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR TCA 90 bp TCTGAAATGACACACTGTACAAACTGGACAAATGAGACGACTGACTGTGACAGGAGAGAAATACCTGGCTaGAGAAAAACTACACAACAC +
Preference number: 4 (lower is better)
Translates to: SEMTHCTNWTNETTDCDRREIPG*RKTTQH
Trigger: GTGTTGTGTAGTTTTTCTTCAGCCAGGTATTTCTCT...CCTGTCACAGTCAGTCGTCTCATTTGTCCAGTTTGTACAGTGTGTCATTTCAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR GCA 90 bp ACATTAACGTTACCTTCTGGGATCTCTCAGTGCCCTGAGCGATCTGTGTGTCTACAAATGTTACAGAAATaGCTAGGCTTTTCTAAGCAA +
Preference number: 4 (lower is better)
Translates to: TLTLPSGISQCPERSVCLQMLQK*LGFSKQ
Trigger: TTGCTTAGAAAAGCCTAGGCATTTCTGTAACATTTG...TAGACACACAGATCGCTCAGGGCACTGAGAGATCCCAGAAGGTAACGTTAATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355854.8
ENST00000610540.4
CDS-3UTR GCA 90 bp ACATTAACGTTACCTTCTGGGATCTCTCAGTGCCCTGAGCGATCTGTGTGTCTATCTTCCAATATGGAATaGAAATGTTACAGAAATGCC +
Preference number: 4 (lower is better)
Translates to: TLTLPSGISQCPERSVCLSSNME*KCYRNA
Trigger: GGCATTTCTGTAACATTTGCATTCCATATTGGAAGA...TAGACACACAGATCGCTCAGGGCACTGAGAGATCCCAGAAGGTAACGTTAATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355854.8
ENST00000610540.4
CDS-3UTR GCA 90 bp TACTCTAAAAGACACTTACAGCAGAAAGCATTCACCCATGACCATTATGAAGGATTCTCGTCAGCGAACTaGTCATCATCCGTCCTTTCT +
Preference number: 4 (lower is better)
Translates to: YSKRHLQQKAFTHDHYEGFSSAN*SSSVLS
Trigger: AGAAAGGACGGATGATGAGCAGTTCGCTGACGAGAA...TCCTTCATAATGGTCATGGGTGAATGCTTTCTGCTGTAAGTGTCTTTTAGAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR CCA 90 bp GGCCTCACTCTCCAAAGGAAAACAGACGTCCCAAGATGTTGTGGAACAGTATTAGATGATTTTGGCAAGTaGTTCATGTCGAATACATTC +
Preference number: 4 (lower is better)
Translates to: GLTLQRKTDVPRCCGTVLDDFGK*FMSNTF
Trigger: GAATGTATTCGACATGAACCACTTGCCAAAATCATC...TAATACTGTTCCACAACATCTTGGGACGTCTGTTTTCCTTTGGAGAGTGAGGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR TCA 90 bp CTTTCTGAAATGACACACTGTACAAACTGGACAAATGAGACGACTGACTGTGACAGAGAAATACCTGGCTaGAGAAAAACTACACAACAC +
Preference number: 4 (lower is better)
Translates to: LSEMTHCTNWTNETTDCDREIPG*RKTTQH
Trigger: GTGTTGTGTAGTTTTTCTTCAGCCAGGTATTTCTCT...GTCACAGTCAGTCGTCTCATTTGTCCAGTTTGTACAGTGTGTCATTTCAGAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR TCA 90 bp TACTCTAAAAGACACTTACAGCAGAAAGCATTCACCCATGACCATTATGAAGGAAATTCGAAGGGACTCTaGACTGTCAGGGAACGTTAT +
Preference number: 4 (lower is better)
Translates to: YSKRHLQQKAFTHDHYEGNSKGL*TVRERY
Trigger: ATAACGTTCCCTGACAGTTCAGAGTCCCTTCGAATT...TCCTTCATAATGGTCATGGGTGAATGCTTTCTGCTGTAAGTGTCTTTTAGAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR TCA 90 bp TCTGAAATGACACACTGTACAAACTGGACAAATGAGACGACTGACTGTGACAGGTTTCTTCTCAATATTTaGTGGATATCCGGAGGAAAC +
Preference number: 4 (lower is better)
Translates to: SEMTHCTNWTNETTDCDRFLLNI*WISGGN
Trigger: GTTTCCTCCGGATATCCATCAAATATTGAGAAGAAA...CCTGTCACAGTCAGTCGTCTCATTTGTCCAGTTTGTACAGTGTGTCATTTCAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409308.6
ENST00000410043.5
CDS-3UTR GCA 90 bp CTCACAGTATTTACAGTGAACTTTGTGCAAACAAATCCCCCTTTGTGCAAAGGGAATTTCCACTCTCTTTaGTTGCTCTCAGATTCCAAG +
Preference number: 4 (lower is better)
Translates to: LTVFTVNFVQTNPPLCKGNFHSL*LLSDSK
Trigger: CTTGGAATCTGAGAGCAAGCAAAGAGAGTGGAAATT...CCCTTTGCACAAAGGGGGATTTGTTTGCACAAAGTTCACTGTAAATACTGTGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355854.8
ENST00000610540.4
CDS-3UTR GCA 90 bp GGCCTCACTCTCCAAAGGAAAACAGACGTCCCAAGATGTTGTGGAACAGTATTACAAATGTTACAGAAATaGCTAGGCTTTTCTAAGCAA +
Preference number: 4 (lower is better)
Translates to: GLTLQRKTDVPRCCGTVLQMLQK*LGFSKQ
Trigger: TTGCTTAGAAAAGCCTAGGCATTTCTGTAACATTTG...TAATACTGTTCCACAACATCTTGGGACGTCTGTTTTCCTTTGGAGAGTGAGGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355854.8
ENST00000610540.4
CDS-3UTR CCA 90 bp TCTGAAATGACACACTGTACAAACTGGACAAATGAGACGACTGACTGTGACAGGGATGATTTTGGCAAGTaGTTCATGTCGAATACATTC +
Preference number: 4 (lower is better)
Translates to: SEMTHCTNWTNETTDCDRDDFGK*FMSNTF
Trigger: GAATGTATTCGACATGAACCACTTGCCAAAATCATC...CCTGTCACAGTCAGTCGTCTCATTTGTCCAGTTTGTACAGTGTGTCATTTCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409130.5
ENST00000409308.6
ENST00000410043.5
ENST00000425242.5
ENST00000610540.4
CDS-3UTR TCA 90 bp ACTTACAGCAGAAAGCATTCACCCATGACCATTATGAAGGAAATATTCTGTCCCTTCTGTCCCTCTTTTTaGAGAGTAACAGTTACCACT +
Preference number: 4 (lower is better)
Translates to: TYSRKHSPMTIMKEIFCPFCPSF*RVTVTT
Trigger: AGTGGTAACTGTTACTCTTCAAAAAGAGGGACAGAA...GGGACAGAATATTTCCTTCATAATGGTCATGGGTGAATGCTTTCTGCTGTAAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355854.8
CDS-3UTR TCA 90 bp ACTTACAGCAGAAAGCATTCACCCATGACCATTATGAAGGAAATATTCTGTCCCAGAGAAATACCTGGCTaGAGAAAAACTACACAACAC +
Preference number: 4 (lower is better)
Translates to: TYSRKHSPMTIMKEIFCPREIPG*RKTTQH
Trigger: GTGTTGTGTAGTTTTTCTTCAGCCAGGTATTTCTCT...GGGACAGAATATTTCCTTCATAATGGTCATGGGTGAATGCTTTCTGCTGTAAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR CCA 90 bp CTTTCTGAAATGACACACTGTACAAACTGGACAAATGAGACGACTGACTGTGACGATGATTTTGGCAAGTaGTTCATGTCGAATACATTC +
Preference number: 4 (lower is better)
Translates to: LSEMTHCTNWTNETTDCDDDFGK*FMSNTF
Trigger: GAATGTATTCGACATGAACCACTTGCCAAAATCATC...GTCACAGTCAGTCGTCTCATTTGTCCAGTTTGTACAGTGTGTCATTTCAGAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409130.5
ENST00000409308.6
ENST00000410043.5
ENST00000425242.5
ENST00000610540.4
CDS-3UTR TCA 90 bp ACTTACAGCAGAAAGCATTCACCCATGACCATTATGAAGGAAATATTCTGTCCCAACGTTACCAGAAAATaGTCACTTGAACACTCACAT +
Preference number: 4 (lower is better)
Translates to: TYSRKHSPMTIMKEIFCPNVTRK*SLEHSH
Trigger: ATGTGAGTGTTCAAGTGATCATTTTCTGGTAACGTT...GGGACAGAATATTTCCTTCATAATGGTCATGGGTGAATGCTTTCTGCTGTAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355854.8
CDS-3UTR GCA 90 bp CTTTCTGAAATGACACACTGTACAAACTGGACAAATGAGACGACTGACTGTGACCAAATGTTACAGAAATaGCTAGGCTTTTCTAAGCAA +
Preference number: 4 (lower is better)
Translates to: LSEMTHCTNWTNETTDCDQMLQK*LGFSKQ
Trigger: TTGCTTAGAAAAGCCTAGGCATTTCTGTAACATTTG...GTCACAGTCAGTCGTCTCATTTGTCCAGTTTGTACAGTGTGTCATTTCAGAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355854.8
ENST00000410043.5
ENST00000610540.4
CDS-3UTR CCA 90 bp CTTTCTGAAATGACACACTGTACAAACTGGACAAATGAGACGACTGACTGTGACAAATCCCGTTTTAGATaGTTGATGTCTGAAACGAAA +
Preference number: 4 (lower is better)
Translates to: LSEMTHCTNWTNETTDCDKSRFR*LMSETK
Trigger: TTTCGTTTCAGACATCAACCATCTAAAACGGGATTT...GTCACAGTCAGTCGTCTCATTTGTCCAGTTTGTACAGTGTGTCATTTCAGAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR CAA 90 bp AGTACGGGTCATCAGGCTGCCGGCCGGCCTCCTGCAAGGGCACTGGCCAGGGAGTCTGGTCAAACCAGCTaGCTTATGCGTTCTCCACTC +
Preference number: 5 (lower is better)
Translates to: STGHQAAGRPPARALARESGQTS*LMRSPL
Trigger: GAGTGGAGAACGCATAAGCAAGCTGGTTTGACCAGA...CTCCCTGGCCAGTGCCCTTGCAGGAGGCCGGCCGGCAGCCTGATGACCCGTACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355854.8
ENST00000610540.4
CDS-3UTR CAA 90 bp GGTCATCAGGCTGCCGGCCGGCCTCCTGCAAGGGCACTGGCCAGGGAGGCCACAGGGGCTTCATATCCTTaGAGGAGCATAAACAGGATA +
Preference number: 5 (lower is better)
Translates to: GHQAAGRPPARALAREATGASYP*RSINRI
Trigger: TATCCTGTTTATGCTCCTCAAAGGATATGAAGCCCC...TGTGGCCTCCCTGGCCAGTGCCCTTGCAGGAGGCCGGCCGGCAGCCTGATGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR CAA 90 bp CACATCACCTGCCTCGGGGTCCATGCCAGGCAAGAAAGAAACACACACCTGGGCCCCTGGACCCATGGTTaGTGCCTGCTGGGCATCCCA +
Preference number: 5 (lower is better)
Translates to: HITCLGVHARQERNTHLGPWTHG*CLLGIP
Trigger: TGGGATGCCCAGCAGGCACAAACCATGGGTCCAGGG...GCCCAGGTGTGTGTTTCTTTCTTGCCTGGCATGGACCCCGAGGCAGGTGATGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR CAA 90 bp AGTACGGGTCATCAGGCTGCCGGCCGGCCTCCTGCAAGGGCACTGGCCAGGGAGTTCAGGTTCTCCGGCTaGCTGATATACTTTGTCATG +
Preference number: 5 (lower is better)
Translates to: STGHQAAGRPPARALAREFRFSG*LIYFVM
Trigger: CATGACAAAGTATATCAGCAAGCCGGAGAACCTGAA...CTCCCTGGCCAGTGCCCTTGCAGGAGGCCGGCCGGCAGCCTGATGACCCGTACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS GCA 90 bp CACAGCTCCCTTTTACTTCCTCCCTCCTCAGTCCTCCTACTGTGCTaGCCGGTTCCTAACAGGCCATGGACAGGTACAGGTCTGCAGCCC +
Preference number: 5 (lower is better)
Translates to: HSSLLLPPSSVLLLC*PVPNRPWTGTGLQP
Trigger: GGGCTGCAGACCTGTACCTGTCCATGGCCTGTTAGGAACCGGGCAGCACAGTAGGAGGACTGAGGAGGGAGGAAGTAAAAGGGAGCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476943.1
ENST00000610540.4
CDS-3UTR CAA 90 bp AGTACGGGTCATCAGGCTGCCGGCCGGCCTCCTGCAAGGGCACTGGCCAGGGAGGAAAAGAGGATGATTTaGGCAAGTGGTTCATGTCGA +
Preference number: 5 (lower is better)
Translates to: STGHQAAGRPPARALAREEKRMI*ASGSCR
Trigger: TCGACATGAACCACTTGCCAAAATCATCCTCTTTTC...CTCCCTGGCCAGTGCCCTTGCAGGAGGCCGGCCGGCAGCCTGATGACCCGTACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR CAA 90 bp CACACTGTACAAACTGGACAAATGAGACGACTGACTGTGACAGGGGCCGGGGAGCCCTGGACCCATGGTTaGTGCCTGCTGGGCATCCCA +
Preference number: 5 (lower is better)
Translates to: HTVQTGQMRRLTVTGAGEPWTHG*CLLGIP
Trigger: TGGGATGCCCAGCAGGCACAAACCATGGGTCCAGGG...CTCCCCGGCCCCTGTCACAGTCAGTCGTCTCATTTGTCCAGTTTGTACAGTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR CAA 90 bp GGTCATCAGGCTGCCGGCCGGCCTCCTGCAAGGGCACTGGCCAGGGAGGCCACATCCTTCCAATGGTTATaGATACTGATAGAAGTTCCC +
Preference number: 5 (lower is better)
Translates to: GHQAAGRPPARALAREATSFQWL*ILIEVP
Trigger: GGGAACTTCTATCAGTATCAATAACCATTGGAAGGA...TGTGGCCTCCCTGGCCAGTGCCCTTGCAGGAGGCCGGCCGGCAGCCTGATGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR CAA 90 bp AGTTCCCCGCTGAGACTCCCTGGACCCATGGTTTGTGCCTGCTGGGCATCCCACCAAACAAATCCCCCTTaGTGCAAAGGGGGAGCTTCC +
Preference number: 5 (lower is better)
Translates to: SSPLRLPGPMVCACWASHQTNPP*CKGGAS
Trigger: GGAAGCTCCCCCTTTGCACAAAGGGGGATTTGTTTG...GTGGGATGCCCAGCAGGCACAAACCATGGGTCCAGGGAGTCTCAGCGGGGAACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR CAA 90 bp GGCCCCACATCACCTGCCTCGGGGTCCATGCCAGGCAAGAAAGAAACACACACCGGTGATGCCTGTCAATaGAGCTCCCATTTAGCGGCT +
Preference number: 5 (lower is better)
Translates to: GPTSPASGSMPGKKETHTGDACQ*SSHLAA
Trigger: AGCCGCTAAATGGGAGCTCAATTGACAGGCATCACC...GGTGTGTGTTTCTTTCTTGCCTGGCATGGACCCCGAGGCAGGTGATGTGGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR CAA 90 bp CTGGGATCTCTCAGTGCCCTGAGCGATCTGTGTGTCTACCTACAGATGGGCAAACCCTGGACCCATGGTTaGTGCCTGCTGGGCATCCCA +
Preference number: 5 (lower is better)
Translates to: LGSLSALSDLCVYLQMGKPWTHG*CLLGIP
Trigger: TGGGATGCCCAGCAGGCACAAACCATGGGTCCAGGG...TTTGCCCATCTGTAGGTAGACACACAGATCGCTCAGGGCACTGAGAGATCCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS GCA 90 bp AGTCACAGCTCCCTTTTACTTCCTCCCTCCTCAGTCCTCCTACTGTaGTGCCCGGTTCCTAACAGGCCATGGACAGGTACAGGTCTGCAG +
Preference number: 5 (lower is better)
Translates to: SHSSLLLPPSSVLLL*CPVPNRPWTGTGLQ
Trigger: CTGCAGACCTGTACCTGTCCATGGCCTGTTAGGAACCGGGCAGCACAGTAGGAGGACTGAGGAGGGAGGAAGTAAAAGGGAGCTGTGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476943.1
ENST00000610540.4
CDS-3UTR CAA 90 bp CTTGGTGATGCCTGTCAATTGAGCTCCCATTTAGCGGCTCATTGTGCCCAGGGGCCATTTAGCGGCTCATaGTGCCCAGGGGCTCACATC +
Preference number: 5 (lower is better)
Translates to: LGDACQLSSHLAAHCAQGPFSGS*CPGAHI
Trigger: GATGTGAGCCCCTGGGCACAATGAGCCGCTAAATGG...CCCCTGGGCACAATGAGCCGCTAAATGGGAGCTCAATTGACAGGCATCACCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409130.5
ENST00000409308.6
ENST00000610540.4
CDS-3UTR CAA 90 bp AGACTTGGTGATGCCTGTCAATTGAGCTCCCATTTAGCGGCTCATTGTGCCCAGCCCTGGACCCATGGTTaGTGCCTGCTGGGCATCCCA +
Preference number: 5 (lower is better)
Translates to: RLGDACQLSSHLAAHCAQPWTHG*CLLGIP
Trigger: TGGGATGCCCAGCAGGCACAAACCATGGGTCCAGGG...CTGGGCACAATGAGCCGCTAAATGGGAGCTCAATTGACAGGCATCACCAAGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR CAA 90 bp AGTTCCCCGCTGAGACTCCCTGGACCCATGGTTTGTGCCTGCTGGGCATCCCACGGGGCTTCATATCCTTaGAGGAGCATAAACAGGATA +
Preference number: 5 (lower is better)
Translates to: SSPLRLPGPMVCACWASHGASYP*RSINRI
Trigger: TATCCTGTTTATGCTCCTCAAAGGATATGAAGCCCC...GTGGGATGCCCAGCAGGCACAAACCATGGGTCCAGGGAGTCTCAGCGGGGAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR CAA 90 bp CTTGGTGATGCCTGTCAATTGAGCTCCCATTTAGCGGCTCATTGTGCCCAGGGGATGGGCAAAGCATTTTaGCACCCTGGCCCCATTCCC +
Preference number: 5 (lower is better)
Translates to: LGDACQLSSHLAAHCAQGMGKAF*HPGPIP
Trigger: GGGAATGGGGCCAGGGTGCAAAAATGCTTTGCCCAT...CCCCTGGGCACAATGAGCCGCTAAATGGGAGCTCAATTGACAGGCATCACCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409130.5
ENST00000409308.6
ENST00000610540.4
CDS-3UTR CAA 90 bp GGCCCCACATCACCTGCCTCGGGGTCCATGCCAGGCAAGAAAGAAACACACACCGGGGCTTCATATCCTTaGAGGAGCATAAACAGGATA +
Preference number: 5 (lower is better)
Translates to: GPTSPASGSMPGKKETHTGASYP*RSINRI
Trigger: TATCCTGTTTATGCTCCTCAAAGGATATGAAGCCCC...GGTGTGTGTTTCTTTCTTGCCTGGCATGGACCCCGAGGCAGGTGATGTGGGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR CAA 90 bp GGCCCCACATCACCTGCCTCGGGGTCCATGCCAGGCAAGAAAGAAACACACACCTTCAGGTTCTCCGGCTaGCTGATATACTTTGTCATG +
Preference number: 5 (lower is better)
Translates to: GPTSPASGSMPGKKETHTFRFSG*LIYFVM
Trigger: CATGACAAAGTATATCAGCAAGCCGGAGAACCTGAA...GGTGTGTGTTTCTTTCTTGCCTGGCATGGACCCCGAGGCAGGTGATGTGGGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR CAA 90 bp CCTTCTGGGATCTCTCAGTGCCCTGAGCGATCTGTGTGTCTACCTACAGATGGGGGTGATGCCTGTCAATaGAGCTCCCATTTAGCGGCT +
Preference number: 5 (lower is better)
Translates to: PSGISQCPERSVCLPTDGGDACQ*SSHLAA
Trigger: AGCCGCTAAATGGGAGCTCAATTGACAGGCATCACC...CCCATCTGTAGGTAGACACACAGATCGCTCAGGGCACTGAGAGATCCCAGAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409130.5
ENST00000409308.6
ENST00000610540.4
CDS-3UTR CAA 90 bp CACACTGTACAAACTGGACAAATGAGACGACTGACTGTGACAGGGGCCGGGGAGCAAACAAATCCCCCTTaGTGCAAAGGGGGAGCTTCC +
Preference number: 5 (lower is better)
Translates to: HTVQTGQMRRLTVTGAGEQTNPP*CKGGAS
Trigger: GGAAGCTCCCCCTTTGCACAAAGGGGGATTTGTTTG...CTCCCCGGCCCCTGTCACAGTCAGTCGTCTCATTTGTCCAGTTTGTACAGTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR CAA 90 bp GGCCCCACATCACCTGCCTCGGGGTCCATGCCAGGCAAGAAAGAAACACACACCGAAAAGAGGATGATTTaGGCAAGTGGTTCATGTCGA +
Preference number: 5 (lower is better)
Translates to: GPTSPASGSMPGKKETHTEKRMI*ASGSCR
Trigger: TCGACATGAACCACTTGCCAAAATCATCCTCTTTTC...GGTGTGTGTTTCTTTCTTGCCTGGCATGGACCCCGAGGCAGGTGATGTGGGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR CAA 90 bp AGTTCCCCGCTGAGACTCCCTGGACCCATGGTTTGTGCCTGCTGGGCATCCCACCTGGTTAGTAAATCCTaGAAAGTAGCAAAGGCATCT +
Preference number: 5 (lower is better)
Translates to: SSPLRLPGPMVCACWASHLVSKS*KVAKAS
Trigger: AGATGCCTTTGCTACTTTCAAGGATTTACTAACCAG...GTGGGATGCCCAGCAGGCACAAACCATGGGTCCAGGGAGTCTCAGCGGGGAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR CAA 90 bp TCTCTCAGTGCCCTGAGCGATCTGTGTGTCTACCTACAGATGGGCAAAGCATTTCCATTTAGCGGCTCATaGTGCCCAGGGGCTCACATC +
Preference number: 5 (lower is better)
Translates to: SLSALSDLCVYLQMGKAFPFSGS*CPGAHI
Trigger: GATGTGAGCCCCTGGGCACAATGAGCCGCTAAATGG...AAATGCTTTGCCCATCTGTAGGTAGACACACAGATCGCTCAGGGCACTGAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409130.5
ENST00000409308.6
ENST00000610540.4
CDS-3UTR CAA 90 bp ATGACACACTGTACAAACTGGACAAATGAGACGACTGACTGTGACAGGGGCCGGATGGGCAAAGCATTTTaGCACCCTGGCCCCATTCCC +
Preference number: 5 (lower is better)
Translates to: MTHCTNWTNETTDCDRGRMGKAF*HPGPIP
Trigger: GGGAATGGGGCCAGGGTGCAAAAATGCTTTGCCCAT...CCGGCCCCTGTCACAGTCAGTCGTCTCATTTGTCCAGTTTGTACAGTGTGTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409130.5
ENST00000409308.6
ENST00000610540.4
CDS-3UTR CAA 90 bp TACCTTCTGGGATCTCTCAGTGCCCTGAGCGATCTGTGTGTCTACCTACAGATGATGGGCAAAGCATTTTaGCACCCTGGCCCCATTCCC +
Preference number: 5 (lower is better)
Translates to: YLLGSLSALSDLCVYLQMMGKAF*HPGPIP
Trigger: GGGAATGGGGCCAGGGTGCAAAAATGCTTTGCCCAT...CATCTGTAGGTAGACACACAGATCGCTCAGGGCACTGAGAGATCCCAGAAGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409130.5
ENST00000409308.6
ENST00000610540.4
CDS-3UTR CAA 90 bp AGACTTGGTGATGCCTGTCAATTGAGCTCCCATTTAGCGGCTCATTGTGCCCAGATGGGCAAAGCATTTTaGCACCCTGGCCCCATTCCC +
Preference number: 5 (lower is better)
Translates to: RLGDACQLSSHLAAHCAQMGKAF*HPGPIP
Trigger: GGGAATGGGGCCAGGGTGCAAAAATGCTTTGCCCAT...CTGGGCACAATGAGCCGCTAAATGGGAGCTCAATTGACAGGCATCACCAAGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409130.5
ENST00000409308.6
ENST00000610540.4
CDS-3UTR CAA 90 bp AGTTCCCCGCTGAGACTCCCTGGACCCATGGTTTGTGCCTGCTGGGCATCCCACTCCTTCCAATGGTTATaGATACTGATAGAAGTTCCC +
Preference number: 5 (lower is better)
Translates to: SSPLRLPGPMVCACWASHSFQWL*ILIEVP
Trigger: GGGAACTTCTATCAGTATCAATAACCATTGGAAGGA...GTGGGATGCCCAGCAGGCACAAACCATGGGTCCAGGGAGTCTCAGCGGGGAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR CAA 90 bp AGTTCCCCGCTGAGACTCCCTGGACCCATGGTTTGTGCCTGCTGGGCATCCCACTGTCTTCTCAAGATGTaGTTAAATATCTGGGTCACA +
Preference number: 5 (lower is better)
Translates to: SSPLRLPGPMVCACWASHCLLKM*LNIWVT
Trigger: TGTGACCCAGATATTTAACAACATCTTGAGAAGACA...GTGGGATGCCCAGCAGGCACAAACCATGGGTCCAGGGAGTCTCAGCGGGGAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS GCA 90 bp ATGTGTAGAAATCTCTTCTTCCAATATGGAATGCTCCTACTGTGCTaGCCGGTTCCTAACAGGCCATGGACAGGTACAGGTCTGCAGCCC +
Preference number: 5 (lower is better)
Translates to: MCRNLFFQYGMLLLC*PVPNRPWTGTGLQP
Trigger: GGGCTGCAGACCTGTACCTGTCCATGGCCTGTTAGGAACCGGGCAGCACAGTAGGAGCATTCCATATTGGAAGAAGAGATTTCTACACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000347776.9
ENST00000409082.5
CDS-3UTR CAA 90 bp CACATCACCTGCCTCGGGGTCCATGCCAGGCAAGAAAGAAACACACACCTGGGCTTTCTGTCCCTCTTTTaGAAGAGTAACAGTTACCAC +
Preference number: 5 (lower is better)
Translates to: HITCLGVHARQERNTHLGFLSLF*KSNSYH
Trigger: GTGGTAACTGTTACTCTTCAAAAAGAGGGACAGAAA...GCCCAGGTGTGTGTTTCTTTCTTGCCTGGCATGGACCCCGAGGCAGGTGATGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355854.8
CDS-3UTR CAA 90 bp CACACTGTACAAACTGGACAAATGAGACGACTGACTGTGACAGGGGCCGGGGAGGGGGCTTCATATCCTTaGAGGAGCATAAACAGGATA +
Preference number: 5 (lower is better)
Translates to: HTVQTGQMRRLTVTGAGEGASYP*RSINRI
Trigger: TATCCTGTTTATGCTCCTCAAAGGATATGAAGCCCC...CTCCCCGGCCCCTGTCACAGTCAGTCGTCTCATTTGTCCAGTTTGTACAGTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000410043.5
ENST00000425242.5
ENST00000610540.4
CDS-3UTR CAA 90 bp CACACTGTACAAACTGGACAAATGAGACGACTGACTGTGACAGGGGCCGGGGAGTTCAGGTTCTCCGGCTaGCTGATATACTTTGTCATG +
Preference number: 5 (lower is better)
Translates to: HTVQTGQMRRLTVTGAGEFRFSG*LIYFVM
Trigger: CATGACAAAGTATATCAGCAAGCCGGAGAACCTGAA...CTCCCCGGCCCCTGTCACAGTCAGTCGTCTCATTTGTCCAGTTTGTACAGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409130.5
ENST00000409308.6
ENST00000410043.5
ENST00000425242.5
ENST00000610540.4
CDS-3UTR CAA 90 bp CCTTCTGGGATCTCTCAGTGCCCTGAGCGATCTGTGTGTCTACCTACAGATGGGTACAGTCCAAAGACATaGGCAGCAACAAAGGACACA +
Preference number: 5 (lower is better)
Translates to: PSGISQCPERSVCLPTDGYSPKT*AATKDT
Trigger: TGTGTCCTTTGTTGCTGCCAATGTCTTTGGACTGTA...CCCATCTGTAGGTAGACACACAGATCGCTCAGGGCACTGAGAGATCCCAGAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409130.5
ENST00000409308.6
ENST00000610540.4
CDS-3UTR CAA 90 bp CTTGGTGATGCCTGTCAATTGAGCTCCCATTTAGCGGCTCATTGTGCCCAGGGGTACAGTCCAAAGACATaGGCAGCAACAAAGGACACA +
Preference number: 5 (lower is better)
Translates to: LGDACQLSSHLAAHCAQGYSPKT*AATKDT
Trigger: TGTGTCCTTTGTTGCTGCCAATGTCTTTGGACTGTA...CCCCTGGGCACAATGAGCCGCTAAATGGGAGCTCAATTGACAGGCATCACCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409130.5
ENST00000409308.6
ENST00000610540.4
CDS-3UTR CAA 90 bp TCTCTCAGTGCCCTGAGCGATCTGTGTGTCTACCTACAGATGGGCAAAGCATTTCAAACAAATCCCCCTTaGTGCAAAGGGGGAGCTTCC +
Preference number: 5 (lower is better)
Translates to: SLSALSDLCVYLQMGKAFQTNPP*CKGGAS
Trigger: GGAAGCTCCCCCTTTGCACAAAGGGGGATTTGTTTG...AAATGCTTTGCCCATCTGTAGGTAGACACACAGATCGCTCAGGGCACTGAGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR CAA 90 bp GGCCCCACATCACCTGCCTCGGGGTCCATGCCAGGCAAGAAAGAAACACACACCCTTTCTTCTCAATATTaGATGGATATCCGGAGGAAA +
Preference number: 5 (lower is better)
Translates to: GPTSPASGSMPGKKETHTLSSQY*MDIRRK
Trigger: TTTCCTCCGGATATCCATCAAATATTGAGAAGAAAG...GGTGTGTGTTTCTTTCTTGCCTGGCATGGACCCCGAGGCAGGTGATGTGGGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409308.6
CDS-3UTR CAA 90 bp ACTGTACAAACTGGACAAATGAGACGACTGACTGTGACAGGGGCCGGGGAGCTCGAACAAACCACTGATTaGGGGTTCGCATCTTTACGT +
Preference number: 5 (lower is better)
Translates to: TVQTGQMRRLTVTGAGELEQTTD*GFASLR
Trigger: ACGTAAAGATGCGAACCCCAAATCAGTGGTTTGTTC...GAGCTCCCCGGCCCCTGTCACAGTCAGTCGTCTCATTTGTCCAGTTTGTACAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000409308.6
ENST00000410043.5
CDS-3UTR CAA 90 bp ACTGTACAAACTGGACAAATGAGACGACTGACTGTGACAGGGGCCGGGGAGCTCGAAGACAGCTCTTTCTaGAGCTCAAAGCACTTTAGA +
Preference number: 5 (lower is better)
Translates to: TVQTGQMRRLTVTGAGELEDSSF*SSKHFR
Trigger: TCTAAAGTGCTTTGAGCTCAAGAAAGAGCTGTCTTC...GAGCTCCCCGGCCCCTGTCACAGTCAGTCGTCTCATTTGTCCAGTTTGTACAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355854.8
ENST00000410043.5
ENST00000610540.4
CDS-3UTR CAA 90 bp ACTGTACAAACTGGACAAATGAGACGACTGACTGTGACAGGGGCCGGGGAGCTCACTTCTTCTGAAGCCTaGTCTGTCTTTTTGTCTTGC +
Preference number: 5 (lower is better)
Translates to: TVQTGQMRRLTVTGAGELTSSEA*SVFLSC
Trigger: GCAAGACAAAAAGACAGACAAGGCTTCAGAAGAAGT...GAGCTCCCCGGCCCCTGTCACAGTCAGTCGTCTCATTTGTCCAGTTTGTACAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000410043.5
ENST00000610540.4
CDS-3UTR CAA 90 bp CACACTGTACAAACTGGACAAATGAGACGACTGACTGTGACAGGGGCCGGGGAGGAAAAGAGGATGATTTaGGCAAGTGGTTCATGTCGA +
Preference number: 5 (lower is better)
Translates to: HTVQTGQMRRLTVTGAGEEKRMI*ASGSCR
Trigger: TCGACATGAACCACTTGCCAAAATCATCCTCTTTTC...CTCCCCGGCCCCTGTCACAGTCAGTCGTCTCATTTGTCCAGTTTGTACAGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409130.5
ENST00000409308.6
ENST00000410043.5
ENST00000425242.5
ENST00000610540.4
CDS-3UTR CAA 90 bp TCTCTTCCCCTCTCTAGGCAGAGAAATACCTGGCTGAAGAAAAACTACACAACACCATTTAGCGGCTCATaGTGCCCAGGGGCTCACATC +
Preference number: 5 (lower is better)
Translates to: SLPLSRQRNTWLKKNYTTPFSGS*CPGAHI
Trigger: GATGTGAGCCCCTGGGCACAATGAGCCGCTAAATGG...TGTTGTGTAGTTTTTCTTCAGCCAGGTATTTCTCTGCCTAGAGAGGGGAAGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR CAA 90 bp AAGCATTCACCCATGACCATTATGAAGGAAATATTCTGTCCCTCACTCACCCTCCCATTTAGCGGCTCATaGTGCCCAGGGGCTCACATC +
Preference number: 5 (lower is better)
Translates to: KHSPMTIMKEIFCPSLTLPFSGS*CPGAHI
Trigger: GATGTGAGCCCCTGGGCACAATGAGCCGCTAAATGG...GAGGGTGAGTGAGGGACAGAATATTTCCTTCATAATGGTCATGGGTGAATGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR CAA 90 bp TCTGAAATGACACACTGTACAAACTGGACAAATGAGACGACTGACTGTGACAGGCCATTTAGCGGCTCATaGTGCCCAGGGGCTCACATC +
Preference number: 5 (lower is better)
Translates to: SEMTHCTNWTNETTDCDRPFSGS*CPGAHI
Trigger: GATGTGAGCCCCTGGGCACAATGAGCCGCTAAATGG...CCTGTCACAGTCAGTCGTCTCATTTGTCCAGTTTGTACAGTGTGTCATTTCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409130.5
ENST00000409308.6
ENST00000610540.4
CDS-3UTR CAA 90 bp ACTGTACAAACTGGACAAATGAGACGACTGACTGTGACAGGGGCCGGGGAGCTCTCCCGTTTTAGATGGTaGATGTCTGAAACGAAACCA +
Preference number: 5 (lower is better)
Translates to: TVQTGQMRRLTVTGAGELSRFRW*MSETKP
Trigger: TGGTTTCGTTTCAGACATCAACCATCTAAAACGGGA...GAGCTCCCCGGCCCCTGTCACAGTCAGTCGTCTCATTTGTCCAGTTTGTACAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR CAA 90 bp GAAATGACACACTGTACAAACTGGACAAATGAGACGACTGACTGTGACAGGGGCCAAACAAATCCCCCTTaGTGCAAAGGGGGAGCTTCC +
Preference number: 5 (lower is better)
Translates to: EMTHCTNWTNETTDCDRGQTNPP*CKGGAS
Trigger: GGAAGCTCCCCCTTTGCACAAAGGGGGATTTGTTTG...GCCCCTGTCACAGTCAGTCGTCTCATTTGTCCAGTTTGTACAGTGTGTCATTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS TCA 90 bp AGGTTCTCCGGCTTGCTGATATACTTTGTCATGATGGCAAAGTTGTaGCGGTCCAGGATCAGCTCCCCTAGCAGCTTTAAAGACTGTCTC +
Preference number: 5 (lower is better)
Translates to: RFSGLLIYFVMMAKL*RSRISSPSSFKDCL
Trigger: GAGACAGTCTTTAAAGCTGCTAGGGGAGCTGATCCTGGACCGTCACAACTTTGCCATCATGACAAAGTATATCAGCAAGCCGGAGAACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409130.5
ENST00000409308.6
ENST00000410043.5
ENST00000425242.5
ENST00000610540.4
CDS GCA 90 bp TTCATGTGTAGAAATCTCTTCTTCCAATATGGAATGCTCCTACTGTaGTGCCCGGTTCCTAACAGGCCATGGACAGGTACAGGTCTGCAG +
Preference number: 5 (lower is better)
Translates to: FMCRNLFFQYGMLLL*CPVPNRPWTGTGLQ
Trigger: CTGCAGACCTGTACCTGTCCATGGCCTGTTAGGAACCGGGCAGCACAGTAGGAGCATTCCATATTGGAAGAAGAGATTTCTACACATGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000347776.9
ENST00000409082.5
CDS-3UTR CAA 90 bp ACATTAACGTTACCTTCTGGGATCTCTCAGTGCCCTGAGCGATCTGTGTGTCTATCTGGTCAAACCAGCTaGCTTATGCGTTCTCCACTC +
Preference number: 5 (lower is better)
Translates to: TLTLPSGISQCPERSVCLSGQTS*LMRSPL
Trigger: GAGTGGAGAACGCATAAGCAAGCTGGTTTGACCAGA...TAGACACACAGATCGCTCAGGGCACTGAGAGATCCCAGAAGGTAACGTTAATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355854.8
ENST00000610540.4
CDS-3UTR CAA 90 bp CTGGGATCTCTCAGTGCCCTGAGCGATCTGTGTGTCTACCTACAGATGGGCAAAACTTCTTCTGAAGCCTaGTCTGTCTTTTTGTCTTGC +
Preference number: 5 (lower is better)
Translates to: LGSLSALSDLCVYLQMGKTSSEA*SVFLSC
Trigger: GCAAGACAAAAAGACAGACAAGGCTTCAGAAGAAGT...TTTGCCCATCTGTAGGTAGACACACAGATCGCTCAGGGCACTGAGAGATCCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR CAA 90 bp CACACTGTACAAACTGGACAAATGAGACGACTGACTGTGACAGGGGCCGGGGAGCTGGTTAGTAAATCCTaGAAAGTAGCAAAGGCATCT +
Preference number: 5 (lower is better)
Translates to: HTVQTGQMRRLTVTGAGELVSKS*KVAKAS
Trigger: AGATGCCTTTGCTACTTTCAAGGATTTACTAACCAG...CTCCCCGGCCCCTGTCACAGTCAGTCGTCTCATTTGTCCAGTTTGTACAGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409130.5
ENST00000409308.6
ENST00000410043.5
ENST00000610540.4
CDS-3UTR CAA 90 bp AGACTTGGTGATGCCTGTCAATTGAGCTCCCATTTAGCGGCTCATTGTGCCCAGTTCAGGTTCTCCGGCTaGCTGATATACTTTGTCATG +
Preference number: 5 (lower is better)
Translates to: RLGDACQLSSHLAAHCAQFRFSG*LIYFVM
Trigger: CATGACAAAGTATATCAGCAAGCCGGAGAACCTGAA...CTGGGCACAATGAGCCGCTAAATGGGAGCTCAATTGACAGGCATCACCAAGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409130.5
ENST00000409308.6
ENST00000610540.4
CDS-3UTR CAA 90 bp GGCCTCACTCTCCAAAGGAAAACAGACGTCCCAAGATGTTGTGGAACAGTATTAGGTGATGCCTGTCAATaGAGCTCCCATTTAGCGGCT +
Preference number: 5 (lower is better)
Translates to: GLTLQRKTDVPRCCGTVLGDACQ*SSHLAA
Trigger: AGCCGCTAAATGGGAGCTCAATTGACAGGCATCACC...TAATACTGTTCCACAACATCTTGGGACGTCTGTTTTCCTTTGGAGAGTGAGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR CAA 90 bp TCTGAAATGACACACTGTACAAACTGGACAAATGAGACGACTGACTGTGACAGGATGGGCAAAGCATTTTaGCACCCTGGCCCCATTCCC +
Preference number: 5 (lower is better)
Translates to: SEMTHCTNWTNETTDCDRMGKAF*HPGPIP
Trigger: GGGAATGGGGCCAGGGTGCAAAAATGCTTTGCCCAT...CCTGTCACAGTCAGTCGTCTCATTTGTCCAGTTTGTACAGTGTGTCATTTCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409130.5
ENST00000409308.6
ENST00000610540.4
CDS-3UTR CAA 90 bp CACACTGTACAAACTGGACAAATGAGACGACTGACTGTGACAGGGGCCGGGGAGTCCTTCCAATGGTTATaGATACTGATAGAAGTTCCC +
Preference number: 5 (lower is better)
Translates to: HTVQTGQMRRLTVTGAGESFQWL*ILIEVP
Trigger: GGGAACTTCTATCAGTATCAATAACCATTGGAAGGA...CTCCCCGGCCCCTGTCACAGTCAGTCGTCTCATTTGTCCAGTTTGTACAGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR CAA 90 bp ACTGTACAAACTGGACAAATGAGACGACTGACTGTGACAGGGGCCGGGGAGCTCTCCTTCCAATGGTTATaGATACTGATAGAAGTTCCC +
Preference number: 5 (lower is better)
Translates to: TVQTGQMRRLTVTGAGELSFQWL*ILIEVP
Trigger: GGGAACTTCTATCAGTATCAATAACCATTGGAAGGA...GAGCTCCCCGGCCCCTGTCACAGTCAGTCGTCTCATTTGTCCAGTTTGTACAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS GCA 90 bp GTCAAACCAGCTTGCTTATGCGTTCTCCACTCCCTCTCTAACACTTaGTTTCAGATACGTACCACAGTCACAGCTCCCTTTTACTTCCTC +
Preference number: 5 (lower is better)
Translates to: VKPACLCVLHSLSNT*FQIRTTVTAPFYFL
Trigger: GAGGAAGTAAAAGGGAGCTGTGACTGTGGTACGTATCTGAAAGCAAGTGTTAGAGAGGGAGTGGAGAACGCATAAGCAAGCTGGTTTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355854.8
ENST00000476943.1
ENST00000610540.4
CDS CCA 90 bp CCAAGCCTTGCTTGTCTCTTAATCTGTCACAGGCAGTTCTGTTTCTaGTCAAACCAGCTTGCTTATGCGTTCTCCACTCCCTCTCTAACA +
Preference number: 5 (lower is better)
Translates to: PSLACLLICHRQFCF*SNQLAYAFSTPSLT
Trigger: TGTTAGAGAGGGAGTGGAGAACGCATAAGCAAGCTGGTTTGACCAGAAACAGAACTGCCTGTGACAGATTAAGAGACAAGCAAGGCTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355854.8
ENST00000476943.1
ENST00000610540.4
CDS-3UTR CAA 90 bp TTACCTTCTGGGATCTCTCAGTGCCCTGAGCGATCTGTGTGTCTACCTACAGATGATTCCAAGCCTTGCTaGTCTCTTAATCTGTCACAG +
Preference number: 5 (lower is better)
Translates to: LPSGISQCPERSVCLPTDDSKPC*SLNLSQ
Trigger: CTGTGACAGATTAAGAGACAAGCAAGGCTTGGAATC...ATCTGTAGGTAGACACACAGATCGCTCAGGGCACTGAGAGATCCCAGAAGGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355854.8
ENST00000610540.4
CDS-3UTR CAA 90 bp CACACTGTACAAACTGGACAAATGAGACGACTGACTGTGACAGGGGCCGGGGAGTGTCTTCTCAAGATGTaGTTAAATATCTGGGTCACA +
Preference number: 5 (lower is better)
Translates to: HTVQTGQMRRLTVTGAGECLLKM*LNIWVT
Trigger: TGTGACCCAGATATTTAACAACATCTTGAGAAGACA...CTCCCCGGCCCCTGTCACAGTCAGTCGTCTCATTTGTCCAGTTTGTACAGTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000410043.5
ENST00000425242.5
ENST00000610540.4
CDS-3UTR CAA 90 bp ACTGTACAAACTGGACAAATGAGACGACTGACTGTGACAGGGGCCGGGGAGCTCTGTCTTCTCAAGATGTaGTTAAATATCTGGGTCACA +
Preference number: 5 (lower is better)
Translates to: TVQTGQMRRLTVTGAGELCLLKM*LNIWVT
Trigger: TGTGACCCAGATATTTAACAACATCTTGAGAAGACA...GAGCTCCCCGGCCCCTGTCACAGTCAGTCGTCTCATTTGTCCAGTTTGTACAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000410043.5
ENST00000425242.5
ENST00000610540.4
CDS-3UTR CAA 90 bp ATGACACACTGTACAAACTGGACAAATGAGACGACTGACTGTGACAGGGGCCGGGAAAAGAGGATGATTTaGGCAAGTGGTTCATGTCGA +
Preference number: 5 (lower is better)
Translates to: MTHCTNWTNETTDCDRGREKRMI*ASGSCR
Trigger: TCGACATGAACCACTTGCCAAAATCATCCTCTTTTC...CCGGCCCCTGTCACAGTCAGTCGTCTCATTTGTCCAGTTTGTACAGTGTGTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409130.5
ENST00000409308.6
ENST00000410043.5
ENST00000425242.5
ENST00000610540.4
CDS-3UTR CAA 90 bp TCTCTCAGTGCCCTGAGCGATCTGTGTGTCTACCTACAGATGGGCAAAGCATTTTTCAGGTTCTCCGGCTaGCTGATATACTTTGTCATG +
Preference number: 5 (lower is better)
Translates to: SLSALSDLCVYLQMGKAFFRFSG*LIYFVM
Trigger: CATGACAAAGTATATCAGCAAGCCGGAGAACCTGAA...AAATGCTTTGCCCATCTGTAGGTAGACACACAGATCGCTCAGGGCACTGAGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409130.5
ENST00000409308.6
ENST00000610540.4
CDS-3UTR CAA 90 bp ATGACACACTGTACAAACTGGACAAATGAGACGACTGACTGTGACAGGGGCCGGTCCCGTTTTAGATGGTaGATGTCTGAAACGAAACCA +
Preference number: 5 (lower is better)
Translates to: MTHCTNWTNETTDCDRGRSRFRW*MSETKP
Trigger: TGGTTTCGTTTCAGACATCAACCATCTAAAACGGGA...CCGGCCCCTGTCACAGTCAGTCGTCTCATTTGTCCAGTTTGTACAGTGTGTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR CAA 90 bp ATGACACACTGTACAAACTGGACAAATGAGACGACTGACTGTGACAGGGGCCGGACTCTAGTTTTCTGTTaGAAAGGTACTGAGCTGGGA +
Preference number: 5 (lower is better)
Translates to: MTHCTNWTNETTDCDRGRTLVFC*KGTELG
Trigger: TCCCAGCTCAGTACCTTTCAAACAGAAAACTAGAGT...CCGGCCCCTGTCACAGTCAGTCGTCTCATTTGTCCAGTTTGTACAGTGTGTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR CAA 90 bp AGACTTGGTGATGCCTGTCAATTGAGCTCCCATTTAGCGGCTCATTGTGCCCAGACTCTAGTTTTCTGTTaGAAAGGTACTGAGCTGGGA +
Preference number: 5 (lower is better)
Translates to: RLGDACQLSSHLAAHCAQTLVFC*KGTELG
Trigger: TCCCAGCTCAGTACCTTTCAAACAGAAAACTAGAGT...CTGGGCACAATGAGCCGCTAAATGGGAGCTCAATTGACAGGCATCACCAAGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR CAA 90 bp CTGGGATCTCTCAGTGCCCTGAGCGATCTGTGTGTCTACCTACAGATGGGCAAATGCATTAAGCAACTCTaGATTGGTGTTTTCAGAAGC +
Preference number: 5 (lower is better)
Translates to: LGSLSALSDLCVYLQMGKCIKQL*IGVFRS
Trigger: GCTTCTGAAAACACCAATCAAGAGTTGCTTAATGCA...TTTGCCCATCTGTAGGTAGACACACAGATCGCTCAGGGCACTGAGAGATCCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000347776.9
ENST00000610540.4
CDS-3UTR CAA 90 bp GAAATGACACACTGTACAAACTGGACAAATGAGACGACTGACTGTGACAGGGGCACTGATCACCACAGCTaGCTTCTCTCCTTTAGTGCA +
Preference number: 5 (lower is better)
Translates to: EMTHCTNWTNETTDCDRGTDHHS*LLSFSA
Trigger: TGCACTAAAGGAGAGAAGCAAGCTGTGGTGATCAGT...GCCCCTGTCACAGTCAGTCGTCTCATTTGTCCAGTTTGTACAGTGTGTCATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409308.6
ENST00000410043.5
CDS GCA 90 bp AATCTGTCACAGGCAGTTCTGTTTCTGGTCAAACCAGCTTGCTTATaGGTTCTCCACTCCCTCTCTAACACTTGCTTTCAGATACGTACC +
Preference number: 5 (lower is better)
Translates to: NLSQAVLFLVKPACL*VLHSLSNTCFQIRT
Trigger: GGTACGTATCTGAAAGCAAGTGTTAGAGAGGGAGTGGAGAACGCATAAGCAAGCTGGTTTGACCAGAAACAGAACTGCCTGTGACAGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355854.8
ENST00000476943.1
ENST00000610540.4
CDS-3UTR CAA 90 bp ACATTAACGTTACCTTCTGGGATCTCTCAGTGCCCTGAGCGATCTGTGTGTCTAGATTCCAAGCCTTGCTaGTCTCTTAATCTGTCACAG +
Preference number: 5 (lower is better)
Translates to: TLTLPSGISQCPERSVCLDSKPC*SLNLSQ
Trigger: CTGTGACAGATTAAGAGACAAGCAAGGCTTGGAATC...TAGACACACAGATCGCTCAGGGCACTGAGAGATCCCAGAAGGTAACGTTAATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355854.8
ENST00000610540.4
CDS-3UTR CAA 90 bp TCACTCTATCCAGAGCCACATGTTCACAGTTCTCTAGCAAGCAGGTCACACCCCCTGGTTAGTAAATCCTaGAAAGTAGCAAAGGCATCT +
Preference number: 5 (lower is better)
Translates to: SLYPEPHVHSSLASRSHPLVSKS*KVAKAS
Trigger: AGATGCCTTTGCTACTTTCAAGGATTTACTAACCAG...GGGGTGTGACCTGCTTGCTAGAGAACTGTGAACATGTGGCTCTGGATAGAGTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR CAA 90 bp CTTTCTGAAATGACACACTGTACAAACTGGACAAATGAGACGACTGACTGTGACGGTGATGCCTGTCAATaGAGCTCCCATTTAGCGGCT +
Preference number: 5 (lower is better)
Translates to: LSEMTHCTNWTNETTDCDGDACQ*SSHLAA
Trigger: AGCCGCTAAATGGGAGCTCAATTGACAGGCATCACC...GTCACAGTCAGTCGTCTCATTTGTCCAGTTTGTACAGTGTGTCATTTCAGAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409130.5
ENST00000409308.6
ENST00000610540.4
CDS-3UTR CAA 90 bp TTACCTTCTGGGATCTCTCAGTGCCCTGAGCGATCTGTGTGTCTACCTACAGATTCCCGTTTTAGATGGTaGATGTCTGAAACGAAACCA +
Preference number: 5 (lower is better)
Translates to: LPSGISQCPERSVCLPTDSRFRW*MSETKP
Trigger: TGGTTTCGTTTCAGACATCAACCATCTAAAACGGGA...ATCTGTAGGTAGACACACAGATCGCTCAGGGCACTGAGAGATCCCAGAAGGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR CAA 90 bp TCTCTCAGTGCCCTGAGCGATCTGTGTGTCTACCTACAGATGGGCAAAGCATTTTCCCGTTTTAGATGGTaGATGTCTGAAACGAAACCA +
Preference number: 5 (lower is better)
Translates to: SLSALSDLCVYLQMGKAFSRFRW*MSETKP
Trigger: TGGTTTCGTTTCAGACATCAACCATCTAAAACGGGA...AAATGCTTTGCCCATCTGTAGGTAGACACACAGATCGCTCAGGGCACTGAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR CAA 90 bp TCACTCTATCCAGAGCCACATGTTCACAGTTCTCTAGCAAGCAGGTCACACCCCTGCATTAAGCAACTCTaGATTGGTGTTTTCAGAAGC +
Preference number: 5 (lower is better)
Translates to: SLYPEPHVHSSLASRSHPCIKQL*IGVFRS
Trigger: GCTTCTGAAAACACCAATCAAGAGTTGCTTAATGCA...GGGGTGTGACCTGCTTGCTAGAGAACTGTGAACATGTGGCTCTGGATAGAGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000347776.9
ENST00000610540.4
CDS-3UTR CAA 90 bp ACATTAACGTTACCTTCTGGGATCTCTCAGTGCCCTGAGCGATCTGTGTGTCTAACTTCTTCTGAAGCCTaGTCTGTCTTTTTGTCTTGC +
Preference number: 5 (lower is better)
Translates to: TLTLPSGISQCPERSVCLTSSEA*SVFLSC
Trigger: GCAAGACAAAAAGACAGACAAGGCTTCAGAAGAAGT...TAGACACACAGATCGCTCAGGGCACTGAGAGATCCCAGAAGGTAACGTTAATGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR CAA 90 bp GAAATGACACACTGTACAAACTGGACAAATGAGACGACTGACTGTGACAGGGGCACTTCTTCTGAAGCCTaGTCTGTCTTTTTGTCTTGC +
Preference number: 5 (lower is better)
Translates to: EMTHCTNWTNETTDCDRGTSSEA*SVFLSC
Trigger: GCAAGACAAAAAGACAGACAAGGCTTCAGAAGAAGT...GCCCCTGTCACAGTCAGTCGTCTCATTTGTCCAGTTTGTACAGTGTGTCATTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000410043.5
ENST00000610540.4
CDS-3UTR CAA 90 bp ACATTAACGTTACCTTCTGGGATCTCTCAGTGCCCTGAGCGATCTGTGTGTCTAGAAAAGAGGATGATTTaGGCAAGTGGTTCATGTCGA +
Preference number: 5 (lower is better)
Translates to: TLTLPSGISQCPERSVCLEKRMI*ASGSCR
Trigger: TCGACATGAACCACTTGCCAAAATCATCCTCTTTTC...TAGACACACAGATCGCTCAGGGCACTGAGAGATCCCAGAAGGTAACGTTAATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409130.5
ENST00000409308.6
ENST00000610540.4
CDS-3UTR CAA 90 bp TCTGAAATGACACACTGTACAAACTGGACAAATGAGACGACTGACTGTGACAGGCCAGAAAATGATCACTaGAACACTCACATAGGGCAG +
Preference number: 5 (lower is better)
Translates to: SEMTHCTNWTNETTDCDRPENDH*NTHIGQ
Trigger: CTGCCCTATGTGAGTGTTCAAGTGATCATTTTCTGG...CCTGTCACAGTCAGTCGTCTCATTTGTCCAGTTTGTACAGTGTGTCATTTCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355854.8
CDS-3UTR CAA 90 bp TCTGAAATGACACACTGTACAAACTGGACAAATGAGACGACTGACTGTGACAGGGGGGCTTCATATCCTTaGAGGAGCATAAACAGGATA +
Preference number: 5 (lower is better)
Translates to: SEMTHCTNWTNETTDCDRGASYP*RSINRI
Trigger: TATCCTGTTTATGCTCCTCAAAGGATATGAAGCCCC...CCTGTCACAGTCAGTCGTCTCATTTGTCCAGTTTGTACAGTGTGTCATTTCAGA
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000410043.5
ENST00000425242.5
ENST00000610540.4
CDS-3UTR CAA 90 bp TCTGAAATGACACACTGTACAAACTGGACAAATGAGACGACTGACTGTGACAGGTACAGTCCAAAGACATaGGCAGCAACAAAGGACACA +
Preference number: 5 (lower is better)
Translates to: SEMTHCTNWTNETTDCDRYSPKT*AATKDT
Trigger: TGTGTCCTTTGTTGCTGCCAATGTCTTTGGACTGTA...CCTGTCACAGTCAGTCGTCTCATTTGTCCAGTTTGTACAGTGTGTCATTTCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409130.5
ENST00000409308.6
ENST00000610540.4
CDS-3UTR CAA 90 bp GGCCTCACTCTCCAAAGGAAAACAGACGTCCCAAGATGTTGTGGAACAGTATTAACTCTAGTTTTCTGTTaGAAAGGTACTGAGCTGGGA +
Preference number: 5 (lower is better)
Translates to: GLTLQRKTDVPRCCGTVLTLVFC*KGTELG
Trigger: TCCCAGCTCAGTACCTTTCAAACAGAAAACTAGAGT...TAATACTGTTCCACAACATCTTGGGACGTCTGTTTTCCTTTGGAGAGTGAGGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS GCA 90 bp TCACTTGAACACTCACATAGGGCAGCTGTAAATTTCCACTCTCTTTaGTTGCTCTCAGATTCCAAGCCTTGCTTGTCTCTTAATCTGTCA +
Preference number: 5 (lower is better)
Translates to: SLEHSHRAAVNFHSL*LLSDSKPCLSLNLS
Trigger: TGACAGATTAAGAGACAAGCAAGGCTTGGAATCTGAGAGCAAGCAAAGAGAGTGGAAATTTACAGCTGCCCTATGTGAGTGTTCAAGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355854.8
CDS CCA 90 bp GCCTTTATCGTCCATTTAATAGAGGTTGCCTCCTATTACCAAGCGTaGCAGAGAAAAGAGTTTCCACAATTAGGTCTTGACTTTCTGTCC +
Preference number: 5 (lower is better)
Translates to: AFIVHLIEVASYYQA*QRKEFPQLGLDFLS
Trigger: GGACAGAAAGTCAAGACCTAATTGTGGAAACTCTTTTCTCTGCCACGCTTGGTAATAGGAGGCAACCTCTATTAAATGGACGATAAAGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355854.8
CDS-3UTR CAA 90 bp TCTCTTCCCCTCTCTAGGCAGAGAAATACCTGGCTGAAGAAAAACTACACAACAGAAGACAGCTCTTTCTaGAGCTCAAAGCACTTTAGA +
Preference number: 5 (lower is better)
Translates to: SLPLSRQRNTWLKKNYTTEDSSF*SSKHFR
Trigger: TCTAAAGTGCTTTGAGCTCAAGAAAGAGCTGTCTTC...TGTTGTGTAGTTTTTCTTCAGCCAGGTATTTCTCTGCCTAGAGAGGGGAAGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355854.8
ENST00000610540.4
CDS-3UTR CAA 90 bp TCTGAAATGACACACTGTACAAACTGGACAAATGAGACGACTGACTGTGACAGGACTTCTTCTGAAGCCTaGTCTGTCTTTTTGTCTTGC +
Preference number: 5 (lower is better)
Translates to: SEMTHCTNWTNETTDCDRTSSEA*SVFLSC
Trigger: GCAAGACAAAAAGACAGACAAGGCTTCAGAAGAAGT...CCTGTCACAGTCAGTCGTCTCATTTGTCCAGTTTGTACAGTGTGTCATTTCAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000410043.5
ENST00000610540.4
CDS-3UTR CAA 90 bp TCTCTTCCCCTCTCTAGGCAGAGAAATACCTGGCTGAAGAAAAACTACACAACAGAAAAGAGGATGATTTaGGCAAGTGGTTCATGTCGA +
Preference number: 5 (lower is better)
Translates to: SLPLSRQRNTWLKKNYTTEKRMI*ASGSCR
Trigger: TCGACATGAACCACTTGCCAAAATCATCCTCTTTTC...TGTTGTGTAGTTTTTCTTCAGCCAGGTATTTCTCTGCCTAGAGAGGGGAAGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR CAA 90 bp CTTTCTGAAATGACACACTGTACAAACTGGACAAATGAGACGACTGACTGTGACTTCAGGTTCTCCGGCTaGCTGATATACTTTGTCATG +
Preference number: 5 (lower is better)
Translates to: LSEMTHCTNWTNETTDCDFRFSG*LIYFVM
Trigger: CATGACAAAGTATATCAGCAAGCCGGAGAACCTGAA...GTCACAGTCAGTCGTCTCATTTGTCCAGTTTGTACAGTGTGTCATTTCAGAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409130.5
ENST00000409308.6
ENST00000410043.5
ENST00000425242.5
ENST00000610540.4
CDS-3UTR CAA 90 bp CTCACAGTATTTACAGTGAACTTTGTGCAAACAAATCCCCCTTTGTGCAAAGGGTACAGTCCAAAGACATaGGCAGCAACAAAGGACACA +
Preference number: 5 (lower is better)
Translates to: LTVFTVNFVQTNPPLCKGYSPKT*AATKDT
Trigger: TGTGTCCTTTGTTGCTGCCAATGTCTTTGGACTGTA...CCCTTTGCACAAAGGGGGATTTGTTTGCACAAAGTTCACTGTAAATACTGTGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS TCA 90 bp CAGAAATGCCTAGGCTTTTCTAAGCAACAAAATGTAGACACATGGTaGGGTGCTGAAGACAGCTCTTTCTTGAGCTCAAAGCACTTTAGA +
Preference number: 5 (lower is better)
Translates to: QKCLGFSKQQNVDTW*GAEDSSFLSSKHFR
Trigger: TCTAAAGTGCTTTGAGCTCAAGAAAGAGCTGTCTTCAGCACCTCACCATGTGTCTACATTTTGTTGCTTAGAAAAGCCTAGGCATTTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355854.8
ENST00000410043.5
ENST00000476943.1
ENST00000610540.4
CDS GCA 90 bp CTTCCAATATGGAATGATAGGGCAGCTGTAAATTTCCACTCTCTTTaGTTGCTCTCAGATTCCAAGCCTTGCTTGTCTCTTAATCTGTCA +
Preference number: 5 (lower is better)
Translates to: LPIWNDRAAVNFHSL*LLSDSKPCLSLNLS
Trigger: TGACAGATTAAGAGACAAGCAAGGCTTGGAATCTGAGAGCAAGCAAAGAGAGTGGAAATTTACAGCTGCCCTATCATTCCATATTGGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457041.5
CDS-3UTR CAA 90 bp AAGCATTCACCCATGACCATTATGAAGGAAATATTCTGTCCCTCACTCACCCTCAAATTTCCACTCTCTTaGCTTGCTCTCAGATTCCAA +
Preference number: 5 (lower is better)
Translates to: KHSPMTIMKEIFCPSLTLKFPLS*LALRFQ
Trigger: TTGGAATCTGAGAGCAAGCAAAGAGAGTGGAAATTT...GAGGGTGAGTGAGGGACAGAATATTTCCTTCATAATGGTCATGGGTGAATGCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355854.8
ENST00000610540.4
CDS-3UTR CAA 90 bp CTTTCTGAAATGACACACTGTACAAACTGGACAAATGAGACGACTGACTGTGACGAAAAGAGGATGATTTaGGCAAGTGGTTCATGTCGA +
Preference number: 5 (lower is better)
Translates to: LSEMTHCTNWTNETTDCDEKRMI*ASGSCR
Trigger: TCGACATGAACCACTTGCCAAAATCATCCTCTTTTC...GTCACAGTCAGTCGTCTCATTTGTCCAGTTTGTACAGTGTGTCATTTCAGAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409130.5
ENST00000409308.6
ENST00000410043.5
ENST00000425242.5
ENST00000610540.4
CDS-3UTR CAA 90 bp TCTCTTCCCCTCTCTAGGCAGAGAAATACCTGGCTGAAGAAAAACTACACAACACTGGTTAGTAAATCCTaGAAAGTAGCAAAGGCATCT +
Preference number: 5 (lower is better)
Translates to: SLPLSRQRNTWLKKNYTTLVSKS*KVAKAS
Trigger: AGATGCCTTTGCTACTTTCAAGGATTTACTAACCAG...TGTTGTGTAGTTTTTCTTCAGCCAGGTATTTCTCTGCCTAGAGAGGGGAAGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR CAA 90 bp ACTTACAGCAGAAAGCATTCACCCATGACCATTATGAAGGAAATATTCTGTCCCGAACAAACCACTGATTaGGGGTTCGCATCTTTACGT +
Preference number: 5 (lower is better)
Translates to: TYSRKHSPMTIMKEIFCPEQTTD*GFASLR
Trigger: ACGTAAAGATGCGAACCCCAAATCAGTGGTTTGTTC...GGGACAGAATATTTCCTTCATAATGGTCATGGGTGAATGCTTTCTGCTGTAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409308.6
CDS-3UTR CAA 90 bp TACTCTAAAAGACACTTACAGCAGAAAGCATTCACCCATGACCATTATGAAGGAACTGATCACCACAGCTaGCTTCTCTCCTTTAGTGCA +
Preference number: 5 (lower is better)
Translates to: YSKRHLQQKAFTHDHYEGTDHHS*LLSFSA
Trigger: TGCACTAAAGGAGAGAAGCAAGCTGTGGTGATCAGT...TCCTTCATAATGGTCATGGGTGAATGCTTTCTGCTGTAAGTGTCTTTTAGAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409308.6
CDS-3UTR CAA 90 bp AAGCATTCACCCATGACCATTATGAAGGAAATATTCTGTCCCTCACTCACCCTCTGTCTTCTCAAGATGTaGTTAAATATCTGGGTCACA +
Preference number: 5 (lower is better)
Translates to: KHSPMTIMKEIFCPSLTLCLLKM*LNIWVT
Trigger: TGTGACCCAGATATTTAACAACATCTTGAGAAGACA...GAGGGTGAGTGAGGGACAGAATATTTCCTTCATAATGGTCATGGGTGAATGCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR CAA 90 bp CTTTCTGAAATGACACACTGTACAAACTGGACAAATGAGACGACTGACTGTGACCTGGTTAGTAAATCCTaGAAAGTAGCAAAGGCATCT +
Preference number: 5 (lower is better)
Translates to: LSEMTHCTNWTNETTDCDLVSKS*KVAKAS
Trigger: AGATGCCTTTGCTACTTTCAAGGATTTACTAACCAG...GTCACAGTCAGTCGTCTCATTTGTCCAGTTTGTACAGTGTGTCATTTCAGAAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409130.5
ENST00000409308.6
ENST00000410043.5
ENST00000610540.4
CDS-3UTR CAA 90 bp TACTCTAAAAGACACTTACAGCAGAAAGCATTCACCCATGACCATTATGAAGGATACAGTCCAAAGACATaGGCAGCAACAAAGGACACA +
Preference number: 5 (lower is better)
Translates to: YSKRHLQQKAFTHDHYEGYSPKT*AATKDT
Trigger: TGTGTCCTTTGTTGCTGCCAATGTCTTTGGACTGTA...TCCTTCATAATGGTCATGGGTGAATGCTTTCTGCTGTAAGTGTCTTTTAGAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR CAA 90 bp ACTTACAGCAGAAAGCATTCACCCATGACCATTATGAAGGAAATATTCTGTCCCACTCTAGTTTTCTGTTaGAAAGGTACTGAGCTGGGA +
Preference number: 5 (lower is better)
Translates to: TYSRKHSPMTIMKEIFCPTLVFC*KGTELG
Trigger: TCCCAGCTCAGTACCTTTCAAACAGAAAACTAGAGT...GGGACAGAATATTTCCTTCATAATGGTCATGGGTGAATGCTTTCTGCTGTAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS-3UTR CAA 90 bp TACTCTAAAAGACACTTACAGCAGAAAGCATTCACCCATGACCATTATGAAGGAGAAGACAGCTCTTTCTaGAGCTCAAAGCACTTTAGA +
Preference number: 5 (lower is better)
Translates to: YSKRHLQQKAFTHDHYEGEDSSF*SSKHFR
Trigger: TCTAAAGTGCTTTGAGCTCAAGAAAGAGCTGTCTTC...TCCTTCATAATGGTCATGGGTGAATGCTTTCTGCTGTAAGTGTCTTTTAGAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355854.8
ENST00000610540.4
CDS-3UTR CAA 90 bp CTTTCTGAAATGACACACTGTACAAACTGGACAAATGAGACGACTGACTGTGACCTTTCTTCTCAATATTaGATGGATATCCGGAGGAAA +
Preference number: 5 (lower is better)
Translates to: LSEMTHCTNWTNETTDCDLSSQY*MDIRRK
Trigger: TTTCCTCCGGATATCCATCAAATATTGAGAAGAAAG...GTCACAGTCAGTCGTCTCATTTGTCCAGTTTGTACAGTGTGTCATTTCAGAAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409308.6
ENST00000410043.5
CDS TCA 90 bp CACAATCACGCTATCATTACCATATGTTGTGATCAATGCACTTGTTaGCTTTTTCATCTTATGTTCCCAAATCTACTCCTCTGCTGGGTT +
Preference number: 5 (lower is better)
Translates to: HNHAIITICCDQCTC*LFHLMFPNLLLCWV
Trigger: AACCCAGCAGAGGAGTAGATTTGGGAACATAAGATGAAAAAGTCAACAAGTGCATTGATCACAACATATGGTAATGATAGCGTGATTGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000413278.5
CDS-3UTR CAA 90 bp TACTCTAAAAGACACTTACAGCAGAAAGCATTCACCCATGACCATTATGAAGGACTGGTTAGTAAATCCTaGAAAGTAGCAAAGGCATCT +
Preference number: 5 (lower is better)
Translates to: YSKRHLQQKAFTHDHYEGLVSKS*KVAKAS
Trigger: AGATGCCTTTGCTACTTTCAAGGATTTACTAACCAG...TCCTTCATAATGGTCATGGGTGAATGCTTTCTGCTGTAAGTGTCTTTTAGAGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS CCA 90 bp TTTGTCACGATTCATTCAATATCCACTGAAGATCTACTATGTGCCTaGCACTATTGCAGACGTATTCTGGAATTTGAGTGTATTCTGAAA +
Preference number: 5 (lower is better)
Translates to: FVTIHSISTEDLLCA*HYCRRILEFECILK
Trigger: TTTCAGAATACACTCAAATTCCAGAATACGTCTGCAATAGTGCCAGGCACATAGTAGATCTTCAGTGGATATTGAATGAATCGTGACAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409130.5
CDS-3UTR CAA 90 bp TACTCTAAAAGACACTTACAGCAGAAAGCATTCACCCATGACCATTATGAAGGATGTCTTCTCAAGATGTaGTTAAATATCTGGGTCACA +
Preference number: 5 (lower is better)
Translates to: YSKRHLQQKAFTHDHYEGCLLKM*LNIWVT
Trigger: TGTGACCCAGATATTTAACAACATCTTGAGAAGACA...TCCTTCATAATGGTCATGGGTGAATGCTTTCTGCTGTAAGTGTCTTTTAGAGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409308.6
ENST00000610540.4
CDS GCA 72 bp CTTTTACTTCCTCCCTCCTCAGTCCTCCTACTGTGCTaGCCGGTTCCTAACAGGCCATGGACAGGTACAGGT +
Preference number: 6 (lower is better)
Translates to: LLLPPSSVLLLC*PVPNRPWTGTG
Trigger: ACCTGTACCTGTCCATGGCCTGTTAGGAACCGGGCAGCACAGTAGGAGGACTGAGGAGGGAGGAAGTAAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476943.1
ENST00000610540.4
CDS GCA 72 bp TCCCTTTTACTTCCTCCCTCCTCAGTCCTCCTACTGTaGTGCCCGGTTCCTAACAGGCCATGGACAGGTACA +
Preference number: 6 (lower is better)
Translates to: SLLLPPSSVLLL*CPVPNRPWTGT
Trigger: TGTACCTGTCCATGGCCTGTTAGGAACCGGGCAGCACAGTAGGAGGACTGAGGAGGGAGGAAGTAAAAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476943.1
ENST00000610540.4
CDS GCA 72 bp CTGTCACAGGCAGTTCTGTTTCTGGTCAAACCAGCTTaGTTATGCGTTCTCCACTCCCTCTCTAACACTTGC +
Preference number: 6 (lower is better)
Translates to: LSQAVLFLVKPA*LCVLHSLSNTC
Trigger: GCAAGTGTTAGAGAGGGAGTGGAGAACGCATAAGCAAGCTGGTTTGACCAGAAACAGAACTGCCTGTGACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355854.8
ENST00000476943.1
ENST00000610540.4
CDS GCA 72 bp AATCTCTTCTTCCAATATGGAATGCTCCTACTGTGCTaGCCGGTTCCTAACAGGCCATGGACAGGTACAGGT +
Preference number: 6 (lower is better)
Translates to: NLFFQYGMLLLC*PVPNRPWTGTG
Trigger: ACCTGTACCTGTCCATGGCCTGTTAGGAACCGGGCAGCACAGTAGGAGCATTCCATATTGGAAGAAGAGATT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000347776.9
ENST00000409082.5
CDS GCA 72 bp GCTTGCTTATGCGTTCTCCACTCCCTCTCTAACACTTaGTTTCAGATACGTACCACAGTCACAGCTCCCTTT +
Preference number: 6 (lower is better)
Translates to: ACLCVLHSLSNT*FQIRTTVTAPF
Trigger: AAAGGGAGCTGTGACTGTGGTACGTATCTGAAAGCAAGTGTTAGAGAGGGAGTGGAGAACGCATAAGCAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355854.8
ENST00000470410.1
ENST00000476943.1
ENST00000610540.4
CDS GCA 72 bp CAGGCAGTTCTGTTTCTGGTCAAACCAGCTTGCTTATaGGTTCTCCACTCCCTCTCTAACACTTGCTTTCAG +
Preference number: 6 (lower is better)
Translates to: QAVLFLVKPACL*VLHSLSNTCFQ
Trigger: CTGAAAGCAAGTGTTAGAGAGGGAGTGGAGAACGCATAAGCAAGCTGGTTTGACCAGAAACAGAACTGCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355854.8
ENST00000476943.1
ENST00000610540.4
CDS GCA 72 bp AGAAATCTCTTCTTCCAATATGGAATGCTCCTACTGTaGTGCCCGGTTCCTAACAGGCCATGGACAGGTACA +
Preference number: 6 (lower is better)
Translates to: RNLFFQYGMLLL*CPVPNRPWTGT
Trigger: TGTACCTGTCCATGGCCTGTTAGGAACCGGGCAGCACAGTAGGAGCATTCCATATTGGAAGAAGAGATTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000347776.9
ENST00000409082.5
CDS CCA 72 bp GCTTGTCTCTTAATCTGTCACAGGCAGTTCTGTTTCTaGTCAAACCAGCTTGCTTATGCGTTCTCCACTCCC +
Preference number: 6 (lower is better)
Translates to: ACLLICHRQFCF*SNQLAYAFSTP
Trigger: GGGAGTGGAGAACGCATAAGCAAGCTGGTTTGACCAGAAACAGAACTGCCTGTGACAGATTAAGAGACAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355854.8
ENST00000457041.5
ENST00000476943.1
ENST00000610540.4
CDS TCA 72 bp GGCTTGCTGATATACTTTGTCATGATGGCAAAGTTGTaGCGGTCCAGGATCAGCTCCCCTAGCAGCTTTAAA +
Preference number: 6 (lower is better)
Translates to: GLLIYFVMMAKL*RSRISSPSSFK
Trigger: TTTAAAGCTGCTAGGGGAGCTGATCCTGGACCGTCACAACTTTGCCATCATGACAAAGTATATCAGCAAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000347776.9
ENST00000355854.8
ENST00000409130.5
ENST00000409308.6
ENST00000410043.5
ENST00000425242.5
ENST00000610540.4
CDS GCA 72 bp TTTTCATGTGTAGAAATCTCTTCTTCCAATATGGAATaGTCCTACTGTGCTGCCCGGTTCCTAACAGGCCAT +
Preference number: 6 (lower is better)
Translates to: FSCVEISSSNME*SYCAARFLTGH
Trigger: ATGGCCTGTTAGGAACCGGGCAGCACAGTAGGAGCATTCCATATTGGAAGAAGAGATTTCTACACATGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000347776.9
ENST00000409082.5
CDS TCA 72 bp CTAGGCTTTTCTAAGCAACAAAATGTAGACACATGGTaGGGTGCTGAAGACAGCTCTTTCTTGAGCTCAAAG +
Preference number: 6 (lower is better)
Translates to: LGFSKQQNVDTW*GAEDSSFLSSK
Trigger: CTTTGAGCTCAAGAAAGAGCTGTCTTCAGCACCTCACCATGTGTCTACATTTTGTTGCTTAGAAAAGCCTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355854.8
ENST00000410043.5
ENST00000476943.1
ENST00000610540.4
CDS CCA 72 bp GTCCATTTAATAGAGGTTGCCTCCTATTACCAAGCGTaGCAGAGAAAAGAGTTTCCACAATTAGGTCTTGAC +
Preference number: 6 (lower is better)
Translates to: VHLIEVASYYQA*QRKEFPQLGLD
Trigger: GTCAAGACCTAATTGTGGAAACTCTTTTCTCTGCCACGCTTGGTAATAGGAGGCAACCTCTATTAAATGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355854.8
CDS CAA 72 bp TTCTTAGCTTTCACCAAAGTCACTGATCACCACAGCTaGCTTCTCTCCTTTAGTGCATTGCTCTTGCATGAA +
Preference number: 6 (lower is better)
Translates to: FLAFTKVTDHHS*LLSFSALLLHE
Trigger: TTCATGCAAGAGCAATGCACTAAAGGAGAGAAGCAAGCTGTGGTGATCAGTGACTTTGGTGAAAGCTAAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409308.6
ENST00000410043.5
ENST00000470410.1
CDS CAA 72 bp CCACAACGTAAGGCAATCTGTGGGGCTTCATATCATTaGTCACGATTCATTCAATATCCACTGAAGATCTAC +
Preference number: 6 (lower is better)
Translates to: PQRKAICGASYH*SRFIQYPLKIY
Trigger: GTAGATCTTCAGTGGATATTGAATGAATCGTGACAAATGATATGAAGCCCCACAGATTGCCTTACGTTGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409130.5
CDS CAA 90 bp AGCATAATCCCACAACGTAAGGCAATCTGTGGGGCTTCATATCATTaGTCACGATTCATTCAATATCCACTGAAGATCTACTATGTGCCT +
Preference number: 6 (lower is better)
Translates to: SIIPQRKAICGASYH*SRFIQYPLKIYYVP
Trigger: AGGCACATAGTAGATCTTCAGTGGATATTGAATGAATCGTGACAAATGATATGAAGCCCCACAGATTGCCTTACGTTGTGGGATTATGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409130.5
CDS CAA 90 bp CCTTTAGTGCATTGCTCTTGCATGAAGAATGAACAAACCACTGATTaGGGGTTCGCATCTTTACGTTCTGAACAGCAACTTAGAACACTT +
Preference number: 6 (lower is better)
Translates to: PLVHCSCMKNEQTTD*GFASLRSEQQLRTL
Trigger: AAGTGTTCTAAGTTGCTGTTCAGAACGTAAAGATGCGAACCCCAAATCAGTGGTTTGTTCATTCTTCATGCAAGAGCAATGCACTAAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409308.6
ENST00000410043.5
ENST00000470410.1
CDS TCA 72 bp CTTCATATCATTTGTCACGATTCATTCAATATCCACTaGAGATCTACTATGTGCCTGGCACTATTGCAGACG +
Preference number: 6 (lower is better)
Translates to: LHIICHDSFNIH*RSTMCLALLQT
Trigger: CGTCTGCAATAGTGCCAGGCACATAGTAGATCTTCAGTGGATATTGAATGAATCGTGACAAATGATATGAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409130.5
CDS CAA 72 bp TCCTTAAAAGGCAATTTAACAACCGTCTCCAAATACTaGAACAAACCCTTTGTGGAGTCAACATTCATCACA +
Preference number: 6 (lower is better)
Translates to: SLKGNLTTVSKY*NKPFVESTFIT
Trigger: TGTGATGAATGTTGACTCCACAAAGGGTTTGTTCAAGTATTTGGAGACGGTTGTTAAATTGCCTTTTAAGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470410.1
CDS TCA 72 bp GCTATCATTACCATATGTTGTGATCAATGCACTTGTTaGCTTTTTCATCTTATGTTCCCAAATCTACTCCTC +
Preference number: 6 (lower is better)
Translates to: AIITICCDQCTC*LFHLMFPNLLL
Trigger: GAGGAGTAGATTTGGGAACATAAGATGAAAAAGTCAACAAGTGCATTGATCACAACATATGGTAATGATAGC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000413278.5
CDS TCA 72 bp GAACAAACCCTTTGTGGAGTCAACATTCATCACAAATaGATTATCCATGCTTTTCTTCCAAACAAATTCTGC +
Preference number: 6 (lower is better)
Translates to: EQTLCGVNIHHK*IIHAFLPNKFC
Trigger: GCAGAATTTGTTTGGAAGAAAAGCATGGATAATTCATTTGTGATGAATGTTGACTCCACAAAGGGTTTGTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470410.1