Pregenerated sensors for CA9 (Homo sapiens)
Ensembl gene IDs: ENSG00000107159Ensembl transcript IDs: ENST00000378357.9, ENST00000485665.1, ENST00000493245.1, ENST00000617161.1
Found 109 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ACATTCTCCAAGATCCAGCCTCTAGGCTCCAGTCTCGGCTACCTCTaGTGGGCGGTAGCTCACACCCCCTTTGGTTCCCCTTCTGTGCTG | + |
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Preference number: 1 (lower is better) Translates to: TFSKIQPLGSSLGYL*WAVAHTPFGSPSVL Trigger: CAGCACAGAAGGGGAACCAAAGGGGGTGTGAGCTACCGCCCAGCAGAGGTAGCCGAGACTGGAGCCTAGAGGCTGGATCTTGGAGAATGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000617161.1 |
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| 3UTR CCA 90 bp | GAGCAGGACAGGACAGTTACCGGCTCCCCCTCAGATGCCTCTGGCTaGCTTCTCACATTCTCCAAGATCCAGCCTCTAGGCTCCAGTCTC | + |
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Preference number: 1 (lower is better) Translates to: EQDRTVTGSPSDASG*LLTFSKIQPLGSSL Trigger: GAGACTGGAGCCTAGAGGCTGGATCTTGGAGAATGTGAGAAGCCAGCCAGAGGCATCTGAGGGGGAGCCGGTAACTGTCCTGTCCTGCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000617161.1 |
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| 3UTR-3UTR GCA 90 bp | TGGCATAATGAGCAGGACAGGACAGTTACCGGCTCCCCCTCAGATGCCTCTGGCCGGCTCCCCCTCAGATaGCTCTGGCTGGCTTCTCAC | + |
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Preference number: 2 (lower is better) Translates to: WHNEQDRTVTGSPSDASGRLPLR*LWLASH Trigger: GTGAGAAGCCAGCCAGAGGCATCTGAGGGGGAGCCG...GCCAGAGGCATCTGAGGGGGAGCCGGTAACTGTCCTGTCCTGCTCATTATGCCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000378357.9 ENST00000617161.1 |
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| 3UTR-3UTR CCA 90 bp | CAGGACAGGACAGTTACCGGCTCCCCCTCAGATGCCTCTGGCTGGCTTCTCACAAGCTCACACCCCCTTTaGTTCCCCTTCTGTGCTGCC | + |
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Preference number: 2 (lower is better) Translates to: QDRTVTGSPSDASGWLLTSSHPL*FPFCAA Trigger: GGCAGCACAGAAGGGGAACCAAAGGGGGTGTGAGCT...TGTGAGAAGCCAGCCAGAGGCATCTGAGGGGGAGCCGGTAACTGTCCTGTCCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000617161.1 |
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| 3UTR-3UTR GCA 90 bp | GGCATAATGAGCAGGACAGGACAGTTACCGGCTCCCCCTCAGATGCCTCTGGCTGTTCCCCTTCTGTGCTaGCTTCTCATCTGCACAAGG | + |
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Preference number: 2 (lower is better) Translates to: GIMSRTGQLPAPPQMPLAVPLLC*LLICTR Trigger: CCTTGTGCAGATGAGAAGGCAGCACAGAAGGGGAAC...AGCCAGAGGCATCTGAGGGGGAGCCGGTAACTGTCCTGTCCTGCTCATTATGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000617161.1 |
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| 3UTR GCA 72 bp | AAGATCCAGCCTCTAGGCTCCAGTCTCGGCTACCTCTaGTGGGCGGTAGCTCACACCCCCTTTGGTTCCCCT | + |
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Preference number: 3 (lower is better) Translates to: KIQPLGSSLGYL*WAVAHTPFGSP Trigger: AGGGGAACCAAAGGGGGTGTGAGCTACCGCCCAGCAGAGGTAGCCGAGACTGGAGCCTAGAGGCTGGATCTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000617161.1 |
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| CDS-3UTR CCA 90 bp | ATGAGCAGGACAGGACAGTTACCGGCTCCCCCTCAGATGCCTCTGGCTGGCTTCCAGAAGGCGGCGAGCTaGGGGCGGATATCCACCGGG | + |
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Preference number: 4 (lower is better) Translates to: MSRTGQLPAPPQMPLAGFQKAAS*GRISTG Trigger: CCCGGTGGATATCCGCCCCCAGCTCGCCGCCTTCTG...GAAGCCAGCCAGAGGCATCTGAGGGGGAGCCGGTAACTGTCCTGTCCTGCTCAT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000378357.9 ENST00000617161.1 |
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| CDS-3UTR CCA 90 bp | AGCAGGACAGGACAGTTACCGGCTCCCCCTCAGATGCCTCTGGCTGGCTTCTCAGGGAGCGGCGGGAGCTaGAAGCCCAGGAGTTCCAGG | + |
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Preference number: 4 (lower is better) Translates to: SRTGQLPAPPQMPLAGFSGSGGS*KPRSSR Trigger: CCTGGAACTCCTGGGCTTCCAGCTCCCGCCGCTCCC...TGAGAAGCCAGCCAGAGGCATCTGAGGGGGAGCCGGTAACTGTCCTGTCCTGCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000378357.9 ENST00000617161.1 |
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| CDS-3UTR CCA 90 bp | CAGGACAGGACAGTTACCGGCTCCCCCTCAGATGCCTCTGGCTGGCTTCTCACAGCGCAGGCGCAGTTCTaGGAGCGGCGGGAGCTGGAA | + |
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Preference number: 4 (lower is better) Translates to: QDRTVTGSPSDASGWLLTAQAQF*ERRELE Trigger: TTCCAGCTCCCGCCGCTCCCAGAACTGCGCCTGCGC...TGTGAGAAGCCAGCCAGAGGCATCTGAGGGGGAGCCGGTAACTGTCCTGTCCTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000378357.9 ENST00000617161.1 |
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| CDS-3UTR TCA 90 bp | CAGGACAGTTACCGGCTCCCCCTCAGATGCCTCTGGCTGGCTTCTCACATTCTCGGGGAGCCATGCGGCTaGCTGTGGGGTGTCCCAGCA | + |
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Preference number: 4 (lower is better) Translates to: QDSYRLPLRCLWLASHILGEPCG*LWGVPA Trigger: TGCTGGGACACCCCACAGTCAGCCGCATGGCTCCCC...GAGAATGTGAGAAGCCAGCCAGAGGCATCTGAGGGGGAGCCGGTAACTGTCCTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000378357.9 ENST00000617161.1 |
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| CDS-3UTR TCA 90 bp | ATAATGAGCAGGACAGGACAGTTACCGGCTCCCCCTCAGATGCCTCTGGCTGGCGCAGCAGTTGCACAGTaGGGCCTGGAGCAGGGGCCG | + |
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Preference number: 4 (lower is better) Translates to: IMSRTGQLPAPPQMPLAGAAVAQ*GLEQGP Trigger: CGGCCCCTGCTCCAGGCCTCACTGTGCAACTGCTGC...GCCAGCCAGAGGCATCTGAGGGGGAGCCGGTAACTGTCCTGTCCTGCTCATTAT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000378357.9 ENST00000617161.1 |
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| CDS-3UTR CCA 90 bp | TACCGGCTCCCCCTCAGATGCCTCTGGCTGGCTTCTCACATTCTCCAAGATCCAGAGGGAGCCAGGGGCTaGGGCACAGGGGAGCCATGC | + |
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Preference number: 4 (lower is better) Translates to: YRLPLRCLWLASHILQDPEGARG*GTGEPC Trigger: GCATGGCTCCCCTGTGCCCCAGCCCCTGGCTCCCTC...TGGATCTTGGAGAATGTGAGAAGCCAGCCAGAGGCATCTGAGGGGGAGCCGGTA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000378357.9 ENST00000617161.1 |
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| CDS-3UTR CCA 90 bp | ATGAGCAGGACAGGACAGTTACCGGCTCCCCCTCAGATGCCTCTGGCTGGCTTCATATCCACCGGGGACTaGAAGCGGCCCGCGCAGGCT | + |
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Preference number: 4 (lower is better) Translates to: MSRTGQLPAPPQMPLAGFISTGD*KRPAQA Trigger: AGCCTGCGCGGGCCGCTTCCAGTCCCCGGTGGATAT...GAAGCCAGCCAGAGGCATCTGAGGGGGAGCCGGTAACTGTCCTGTCCTGCTCAT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000378357.9 ENST00000617161.1 |
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| CDS-3UTR CCA 90 bp | CATAATGAGCAGGACAGGACAGTTACCGGCTCCCCCTCAGATGCCTCTGGCTGGGGGAGCGGCGGGAGCTaGAAGCCCAGGAGTTCCAGG | + |
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Preference number: 4 (lower is better) Translates to: HNEQDRTVTGSPSDASGWGSGGS*KPRSSR Trigger: CCTGGAACTCCTGGGCTTCCAGCTCCCGCCGCTCCC...CCAGCCAGAGGCATCTGAGGGGGAGCCGGTAACTGTCCTGTCCTGCTCATTATG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000378357.9 ENST00000617161.1 |
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| CDS-3UTR CCA 90 bp | ACCGGCTCCCCCTCAGATGCCTCTGGCTGGCTTCTCACATTCTCCAAGATCCAGGCGCAGGCGCAGTTCTaGGAGCGGCGGGAGCTGGAA | + |
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Preference number: 4 (lower is better) Translates to: TGSPSDASGWLLTFSKIQAQAQF*ERRELE Trigger: TTCCAGCTCCCGCCGCTCCCAGAACTGCGCCTGCGC...CTGGATCTTGGAGAATGTGAGAAGCCAGCCAGAGGCATCTGAGGGGGAGCCGGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000378357.9 ENST00000617161.1 |
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| CDS-3UTR TCA 90 bp | CAGTTACCGGCTCCCCCTCAGATGCCTCTGGCTGGCTTCTCACATTCTCCAAGAGGGGAGCCATGCGGCTaGCTGTGGGGTGTCCCAGCA | + |
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Preference number: 4 (lower is better) Translates to: QLPAPPQMPLAGFSHSPRGEPCG*LWGVPA Trigger: TGCTGGGACACCCCACAGTCAGCCGCATGGCTCCCC...TCTTGGAGAATGTGAGAAGCCAGCCAGAGGCATCTGAGGGGGAGCCGGTAACTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000378357.9 ENST00000617161.1 |
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| CDS-3UTR GCA 90 bp | ATGAGCAGGACAGGACAGTTACCGGCTCCCCCTCAGATGCCTCTGGCTGGCTTCTGGCCTTCCACAGTGTaGTCCGAGCCCGGACGACCT | + |
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Preference number: 4 (lower is better) Translates to: MSRTGQLPAPPQMPLAGFWPSTV*SEPGRP Trigger: AGGTCGTCCGGGCTCGGAGCACACTGTGGAAGGCCA...GAAGCCAGCCAGAGGCATCTGAGGGGGAGCCGGTAACTGTCCTGTCCTGCTCAT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000378357.9 ENST00000617161.1 |
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| CDS-3UTR GCA 90 bp | AGCAGGACAGGACAGTTACCGGCTCCCCCTCAGATGCCTCTGGCTGGCTTCTCACGGCTCCCCCTCAGATaGCTCTGGCTGGCTTCTCAC | + |
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Preference number: 4 (lower is better) Translates to: SRTGQLPAPPQMPLAGFSRLPLR*LWLASH Trigger: GTGAGAAGCCAGCCAGAGGCATCTGAGGGGGAGCCG...TGAGAAGCCAGCCAGAGGCATCTGAGGGGGAGCCGGTAACTGTCCTGTCCTGCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000378357.9 ENST00000617161.1 |
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| CDS-3UTR CCA 90 bp | CAGTTACCGGCTCCCCCTCAGATGCCTCTGGCTGGCTTCTCACATTCTCCAAGACAGAAGGCGGCGAGCTaGGGGCGGATATCCACCGGG | + |
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Preference number: 4 (lower is better) Translates to: QLPAPPQMPLAGFSHSPRQKAAS*GRISTG Trigger: CCCGGTGGATATCCGCCCCCAGCTCGCCGCCTTCTG...TCTTGGAGAATGTGAGAAGCCAGCCAGAGGCATCTGAGGGGGAGCCGGTAACTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000378357.9 ENST00000617161.1 |
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| CDS-3UTR CCA 90 bp | ACCGGCTCCCCCTCAGATGCCTCTGGCTGGCTTCTCACATTCTCCAAGATCCAGCTCGGCTACCTCTGCTaGGCGGTAGCTCACACCCCC | + |
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Preference number: 4 (lower is better) Translates to: TGSPSDASGWLLTFSKIQLGYLC*AVAHTP Trigger: GGGGGTGTGAGCTACCGCCCAGCAGAGGTAGCCGAG...CTGGATCTTGGAGAATGTGAGAAGCCAGCCAGAGGCATCTGAGGGGGAGCCGGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000378357.9 ENST00000617161.1 |
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| CDS-3UTR TCA 90 bp | AGTTACCGGCTCCCCCTCAGATGCCTCTGGCTGGCTTCTCACATTCTCCAAGATGCAGCAGTTGCACAGTaGGGCCTGGAGCAGGGGCCG | + |
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Preference number: 4 (lower is better) Translates to: SYRLPLRCLWLASHILQDAAVAQ*GLEQGP Trigger: CGGCCCCTGCTCCAGGCCTCACTGTGCAACTGCTGC...ATCTTGGAGAATGTGAGAAGCCAGCCAGAGGCATCTGAGGGGGAGCCGGTAACT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000378357.9 ENST00000617161.1 |
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| CDS-3UTR GCA 90 bp | TGGCATAATGAGCAGGACAGGACAGTTACCGGCTCCCCCTCAGATGCCTCTGGCCAGTGCAGATGCAGCTaGAGAGCCCGGTACTCCCGC | + |
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Preference number: 4 (lower is better) Translates to: WHNEQDRTVTGSPSDASGQCRCS*RARYSR Trigger: GCGGGAGTACCGGGCTCTGCAGCTGCATCTGCACTG...GCCAGAGGCATCTGAGGGGGAGCCGGTAACTGTCCTGTCCTGCTCATTATGCCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000378357.9 ENST00000617161.1 |
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| CDS-3UTR GCA 90 bp | GCTCCCCCTCAGATGCCTCTGGCTGGCTTCTCACATTCTCCAAGATCCAGCCTCTGGCCTTCCACAGTGTaGTCCGAGCCCGGACGACCT | + |
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Preference number: 4 (lower is better) Translates to: APPQMPLAGFSHSPRSSLWPSTV*SEPGRP Trigger: AGGTCGTCCGGGCTCGGAGCACACTGTGGAAGGCCA...GAGGCTGGATCTTGGAGAATGTGAGAAGCCAGCCAGAGGCATCTGAGGGGGAGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000617161.1 |
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| CDS-3UTR GCA 90 bp | GGCTCCCCCTCAGATGCCTCTGGCTGGCTTCTCACATTCTCCAAGATCCAGCCTCGGCTCCCCCTCAGATaGCTCTGGCTGGCTTCTCAC | + |
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Preference number: 4 (lower is better) Translates to: GSPSDASGWLLTFSKIQPRLPLR*LWLASH Trigger: GTGAGAAGCCAGCCAGAGGCATCTGAGGGGGAGCCG...AGGCTGGATCTTGGAGAATGTGAGAAGCCAGCCAGAGGCATCTGAGGGGGAGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000378357.9 ENST00000617161.1 |
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| CDS-3UTR CCA 90 bp | CTCATCTGCACAAGGAACGCGACGCTGGTGACAGCAAAAAGGAGGCCAAAAACCGAGGGAGCCAGGGGCTaGGGCACAGGGGAGCCATGC | + |
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Preference number: 4 (lower is better) Translates to: LICTRNATLVTAKRRPKTEGARG*GTGEPC Trigger: GCATGGCTCCCCTGTGCCCCAGCCCCTGGCTCCCTC...GGTTTTTGGCCTCCTTTTTGCTGTCACCAGCGTCGCGTTCCTTGTGCAGATGAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000617161.1 |
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| CDS-3UTR CCA 90 bp | ATGAGCAGGACAGGACAGTTACCGGCTCCCCCTCAGATGCCTCTGGCTGGCTTCGGCAACCTCTGGGGATaGACAGGCACCAGAAGCAGC | + |
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Preference number: 4 (lower is better) Translates to: MSRTGQLPAPPQMPLAGFGNLWG*TGTRSS Trigger: GCTGCTTCTGGTGCCTGTCCATCCCCAGAGGTTGCC...GAAGCCAGCCAGAGGCATCTGAGGGGGAGCCGGTAACTGTCCTGTCCTGCTCAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000378357.9 ENST00000617161.1 |
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| CDS-3UTR CCA 90 bp | CGGCTCCCCCTCAGATGCCTCTGGCTGGCTTCTCACATTCTCCAAGATCCAGCCATCCGGGGCAACCTCTaGGGATGGACAGGCACCAGA | + |
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Preference number: 4 (lower is better) Translates to: RLPLRCLWLASHILQDPAIRGNL*GWTGTR Trigger: TCTGGTGCCTGTCCATCCCCAGAGGTTGCCCCGGAT...GGCTGGATCTTGGAGAATGTGAGAAGCCAGCCAGAGGCATCTGAGGGGGAGCCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000378357.9 ENST00000617161.1 |
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| CDS-3UTR TCA 90 bp | GGCTCCCCCTCAGATGCCTCTGGCTGGCTTCTCACATTCTCCAAGATCCAGCCTAAGGCGGTGCTGAGGTaGACCACGTGGATCTCGGCA | + |
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Preference number: 4 (lower is better) Translates to: GSPSDASGWLLTFSKIQPKAVLR*TTWISA Trigger: TGCCGAGATCCACGTGGTTCACCTCAGCACCGCCTT...AGGCTGGATCTTGGAGAATGTGAGAAGCCAGCCAGAGGCATCTGAGGGGGAGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000378357.9 ENST00000617161.1 |
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| CDS-3UTR TCA 90 bp | AGCAGGACAGGACAGTTACCGGCTCCCCCTCAGATGCCTCTGGCTGGCTTCTCATGGCAAAGGCGGTGCTaGGGTGAACCACGTGGATCT | + |
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Preference number: 4 (lower is better) Translates to: SRTGQLPAPPQMPLAGFSWQRRC*GEPRGS Trigger: AGATCCACGTGGTTCACCTCAGCACCGCCTTTGCCA...TGAGAAGCCAGCCAGAGGCATCTGAGGGGGAGCCGGTAACTGTCCTGTCCTGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000378357.9 ENST00000617161.1 |
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| CDS-3UTR GCA 90 bp | ACCGGCTCCCCCTCAGATGCCTCTGGCTGGCTTCTCACATTCTCCAAGATCCAGAAGGGGGAATCCTCCTaGATCCGGGGCAACCTCTGG | + |
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Preference number: 4 (lower is better) Translates to: TGSPSDASGWLLTFSKIQKGESS*IRGNLW Trigger: CCAGAGGTTGCCCCGGATGCAGGAGGATTCCCCCTT...CTGGATCTTGGAGAATGTGAGAAGCCAGCCAGAGGCATCTGAGGGGGAGCCGGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000378357.9 ENST00000617161.1 |
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| CDS-3UTR GCA 90 bp | CAGGACAGGACAGTTACCGGCTCCCCCTCAGATGCCTCTGGCTGGCTTCTCACACGCCCATTCAAAGGCTaGGTCGCTCGGAAGTTCAGC | + |
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Preference number: 4 (lower is better) Translates to: QDRTVTGSPSDASGWLLTRPFKG*VARKFS Trigger: GCTGAACTTCCGAGCGACGCAGCCTTTGAATGGGCG...TGTGAGAAGCCAGCCAGAGGCATCTGAGGGGGAGCCGGTAACTGTCCTGTCCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000378357.9 |
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| CDS-3UTR GCA 90 bp | CAGTTACCGGCTCCCCCTCAGATGCCTCTGGCTGGCTTCTCACATTCTCCAAGACAGCAGCCCGAGGACTaGTGTCCACTCCAGCAGGGA | + |
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Preference number: 4 (lower is better) Translates to: QLPAPPQMPLAGFSHSPRQQPED*CPLQQG Trigger: TCCCTGCTGGAGTGGACAGCAGTCCTCGGGCTGCTG...TCTTGGAGAATGTGAGAAGCCAGCCAGAGGCATCTGAGGGGGAGCCGGTAACTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000378357.9 |
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| CDS-3UTR GCA 90 bp | CAGGACAGTTACCGGCTCCCCCTCAGATGCCTCTGGCTGGCTTCTCACATTCTCAGTCTCGGCTACCTCTaGTGGGCGGTAGCTCACACC | + |
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Preference number: 4 (lower is better) Translates to: QDSYRLPLRCLWLASHILSLGYL*WAVAHT Trigger: GGTGTGAGCTACCGCCCAGCAGAGGTAGCCGAGACT...GAGAATGTGAGAAGCCAGCCAGAGGCATCTGAGGGGGAGCCGGTAACTGTCCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000378357.9 ENST00000617161.1 |
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| CDS-3UTR CCA 90 bp | GGCATAATGAGCAGGACAGGACAGTTACCGGCTCCCCCTCAGATGCCTCTGGCTTTGCACAGTGAGGCCTaGAGCAGGGGCCGGGATCAA | + |
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Preference number: 4 (lower is better) Translates to: GIMSRTGQLPAPPQMPLALHSEA*SRGRDQ Trigger: TTGATCCCGGCCCCTGCTCCAGGCCTCACTGTGCAA...AGCCAGAGGCATCTGAGGGGGAGCCGGTAACTGTCCTGTCCTGCTCATTATGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000378357.9 ENST00000617161.1 |
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| CDS-3UTR CCA 90 bp | CCTTCTGTGCTGCCTTCTCATCTGCACAAGGAACGCGACGCTGGTGACAGCAAAATATCCACCGGGGACTaGAAGCGGCCCGCGCAGGCT | + |
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Preference number: 4 (lower is better) Translates to: PSVLPSHLHKERDAGDSKISTGD*KRPAQA Trigger: AGCCTGCGCGGGCCGCTTCCAGTCCCCGGTGGATAT...TTTGCTGTCACCAGCGTCGCGTTCCTTGTGCAGATGAGAAGGCAGCACAGAAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000617161.1 |
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| CDS-3UTR TCA 90 bp | ACAGGACAGTTACCGGCTCCCCCTCAGATGCCTCTGGCTGGCTTCTCACATTCTAAGGCGGTGCTGAGGTaGACCACGTGGATCTCGGCA | + |
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Preference number: 4 (lower is better) Translates to: TGQLPAPPQMPLAGFSHSKAVLR*TTWISA Trigger: TGCCGAGATCCACGTGGTTCACCTCAGCACCGCCTT...AGAATGTGAGAAGCCAGCCAGAGGCATCTGAGGGGGAGCCGGTAACTGTCCTGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000378357.9 ENST00000617161.1 |
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| CDS-3UTR TCA 90 bp | ACCGGCTCCCCCTCAGATGCCTCTGGCTGGCTTCTCACATTCTCCAAGATCCAGGGAACGCGACGCTGGTaGCAGCAAAAAGGAGGCCAA | + |
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Preference number: 4 (lower is better) Translates to: TGSPSDASGWLLTFSKIQGTRRW*QQKGGQ Trigger: TTGGCCTCCTTTTTGCTGTCACCAGCGTCGCGTTCC...CTGGATCTTGGAGAATGTGAGAAGCCAGCCAGAGGCATCTGAGGGGGAGCCGGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000378357.9 ENST00000617161.1 |
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| CDS-3UTR GCA 90 bp | CAGGACAGGACAGTTACCGGCTCCCCCTCAGATGCCTCTGGCTGGCTTCTCACAGGAGGCAGGGTCAGTTaGACACTGTGGCCATTGTTG | + |
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Preference number: 4 (lower is better) Translates to: QDRTVTGSPSDASGWLLTGGRVS*TLWPLL Trigger: CAACAATGGCCACAGTGTGCAACTGACCCTGCCTCC...TGTGAGAAGCCAGCCAGAGGCATCTGAGGGGGAGCCGGTAACTGTCCTGTCCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000378357.9 ENST00000617161.1 |
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| CDS-3UTR GCA 90 bp | CTGCTGGGCGGTAGCTCACACCCCCTTTGGTTCCCCTTCTGTGCTGCCTTCTCAGGAGGCAGGGTCAGTTaGACACTGTGGCCATTGTTG | + |
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Preference number: 4 (lower is better) Translates to: LLGGSSHPLWFPFCAAFSGGRVS*TLWPLL Trigger: CAACAATGGCCACAGTGTGCAACTGACCCTGCCTCC...TGAGAAGGCAGCACAGAAGGGGAACCAAAGGGGGTGTGAGCTACCGCCCAGCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000617161.1 |
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| CDS-3UTR GCA 90 bp | GCTTCTCACATTCTCCAAGATCCAGCCTCTAGGCTCCAGTCTCGGCTACCTCTGCAGTGCAGATGCAGCTaGAGAGCCCGGTACTCCCGC | + |
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Preference number: 4 (lower is better) Translates to: ASHILQDPASRLQSRLPLQCRCS*RARYSR Trigger: GCGGGAGTACCGGGCTCTGCAGCTGCATCTGCACTG...CAGAGGTAGCCGAGACTGGAGCCTAGAGGCTGGATCTTGGAGAATGTGAGAAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000617161.1 |
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| CDS-3UTR GCA 90 bp | ACAGGACAGTTACCGGCTCCCCCTCAGATGCCTCTGGCTGGCTTCTCACATTCTAGTCTCGGCTACCTCTaGTGGGCGGTAGCTCACACC | + |
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Preference number: 4 (lower is better) Translates to: TGQLPAPPQMPLAGFSHSSLGYL*WAVAHT Trigger: GGTGTGAGCTACCGCCCAGCAGAGGTAGCCGAGACT...AGAATGTGAGAAGCCAGCCAGAGGCATCTGAGGGGGAGCCGGTAACTGTCCTGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000378357.9 ENST00000617161.1 |
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| CDS-3UTR CCA 90 bp | AGCAGGACAGGACAGTTACCGGCTCCCCCTCAGATGCCTCTGGCTGGCTTCTCAGTGAATCCTCTTCACTaGGCAGATCCTCCTCGCCCA | + |
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Preference number: 4 (lower is better) Translates to: SRTGQLPAPPQMPLAGFSVNPLH*ADPPRP Trigger: TGGGCGAGGAGGATCTGCCCAGTGAAGAGGATTCAC...TGAGAAGCCAGCCAGAGGCATCTGAGGGGGAGCCGGTAACTGTCCTGTCCTGCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000378357.9 ENST00000617161.1 |
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| CDS-3UTR CCA 90 bp | CATAATGAGCAGGACAGGACAGTTACCGGCTCCCCCTCAGATGCCTCTGGCTGGGTCAGTTGCACACTGTaGCCATTGTTGCGCAGGCGC | + |
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Preference number: 4 (lower is better) Translates to: HNEQDRTVTGSPSDASGWVSCTL*PLLRRR Trigger: GCGCCTGCGCAACAATGGCCACAGTGTGCAACTGAC...CCAGCCAGAGGCATCTGAGGGGGAGCCGGTAACTGTCCTGTCCTGCTCATTATG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000378357.9 ENST00000617161.1 |
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| CDS-3UTR CCA 90 bp | CAGTTACCGGCTCCCCCTCAGATGCCTCTGGCTGGCTTCTCACATTCTCCAAGATCGGCAGGGAAACGGTaGCCTTCCACAGTGTGCTCC | + |
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Preference number: 4 (lower is better) Translates to: QLPAPPQMPLAGFSHSPRSAGKR*PSTVCS Trigger: GGAGCACACTGTGGAAGGCCACCGTTTCCCTGCCGA...TCTTGGAGAATGTGAGAAGCCAGCCAGAGGCATCTGAGGGGGAGCCGGTAACTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000378357.9 ENST00000617161.1 |
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| CDS-3UTR CCA 90 bp | AGCAGGACAGGACAGTTACCGGCTCCCCCTCAGATGCCTCTGGCTGGCTTCTCAGTGTCAGAGAGGGTGTaGAGCTGCTTAGCACTCAGC | + |
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Preference number: 4 (lower is better) Translates to: SRTGQLPAPPQMPLAGFSVSERV*SCLALS Trigger: GCTGAGTGCTAAGCAGCTCCACACCCTCTCTGACAC...TGAGAAGCCAGCCAGAGGCATCTGAGGGGGAGCCGGTAACTGTCCTGTCCTGCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000378357.9 |
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| CDS-3UTR CCA 90 bp | ATAATGAGCAGGACAGGACAGTTACCGGCTCCCCCTCAGATGCCTCTGGCTGGCAGGCAGGAATTCAGCTaGACTGGCTCAGCAGCCCGA | + |
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Preference number: 4 (lower is better) Translates to: IMSRTGQLPAPPQMPLAGRQEFS*TGSAAR Trigger: TCGGGCTGCTGAGCCAGTCCAGCTGAATTCCTGCCT...GCCAGCCAGAGGCATCTGAGGGGGAGCCGGTAACTGTCCTGTCCTGCTCATTAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000378357.9 |
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| CDS-3UTR CCA 90 bp | AGGACAGGACAGTTACCGGCTCCCCCTCAGATGCCTCTGGCTGGCTTCTCACATAGCTCACACCCCCTTTaGTTCCCCTTCTGTGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: RTGQLPAPPQMPLAGFSHSSHPL*FPFCAA Trigger: GGCAGCACAGAAGGGGAACCAAAGGGGGTGTGAGCT...ATGTGAGAAGCCAGCCAGAGGCATCTGAGGGGGAGCCGGTAACTGTCCTGTCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000378357.9 ENST00000617161.1 |
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| CDS-3UTR TCA 90 bp | TCCAGTCTCGGCTACCTCTGCTGGGCGGTAGCTCACACCCCCTTTGGTTCCCCTTTATTCTGGGGTTCTTaGGGATCTCCAGGAGCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: SSLGYLCWAVAHTPFGSPLFWGS*GSPGAS Trigger: TGAGGCTCCTGGAGATCCTCAAGAACCCCAGAATAA...AGGGGAACCAAAGGGGGTGTGAGCTACCGCCCAGCAGAGGTAGCCGAGACTGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000617161.1 |
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| CDS-3UTR TCA 90 bp | CAGTTACCGGCTCCCCCTCAGATGCCTCTGGCTGGCTTCTCACATTCTCCAAGATGGCAAAGGCGGTGCTaGGGTGAACCACGTGGATCT | + |
|
Preference number: 4 (lower is better) Translates to: QLPAPPQMPLAGFSHSPRWQRRC*GEPRGS Trigger: AGATCCACGTGGTTCACCTCAGCACCGCCTTTGCCA...TCTTGGAGAATGTGAGAAGCCAGCCAGAGGCATCTGAGGGGGAGCCGGTAACTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000378357.9 ENST00000617161.1 |
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| CDS-3UTR TCA 90 bp | GGACAGTTACCGGCTCCCCCTCAGATGCCTCTGGCTGGCTTCTCACATTCTCCATGGGACCTGAGTCTCTaGGCCTTCCTCAGCGATTTC | + |
|
Preference number: 4 (lower is better) Translates to: GQLPAPPQMPLAGFSHSPWDLSL*AFLSDF Trigger: GAAATCGCTGAGGAAGGCTCAGAGACTCAGGTCCCA...TGGAGAATGTGAGAAGCCAGCCAGAGGCATCTGAGGGGGAGCCGGTAACTGTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000378357.9 ENST00000617161.1 |
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| CDS-3UTR TCA 90 bp | AGGACAGGACAGTTACCGGCTCCCCCTCAGATGCCTCTGGCTGGCTTCTCACATATTGGAAGTAGCGGCTaGAGTCAGAGGGCAGGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: RTGQLPAPPQMPLAGFSHIGSSG*SQRAGV Trigger: CACTCCTGCCCTCTGACTTCAGCCGCTACTTCCAAT...ATGTGAGAAGCCAGCCAGAGGCATCTGAGGGGGAGCCGGTAACTGTCCTGTCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000378357.9 ENST00000617161.1 |
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| CDS-3UTR TCA 90 bp | CATAATGAGCAGGACAGGACAGTTACCGGCTCCCCCTCAGATGCCTCTGGCTGGATTGGAAGTAGCGGCTaGAGTCAGAGGGCAGGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: HNEQDRTVTGSPSDASGWIGSSG*SQRAGV Trigger: CACTCCTGCCCTCTGACTTCAGCCGCTACTTCCAAT...CCAGCCAGAGGCATCTGAGGGGGAGCCGGTAACTGTCCTGTCCTGCTCATTATG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000378357.9 ENST00000617161.1 |
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| CDS-3UTR GCA 90 bp | ACAGGACAGTTACCGGCTCCCCCTCAGATGCCTCTGGCTGGCTTCTCACATTCTCACTGTGGCCATTGTTaGGCAGGCGCAGTTCTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: TGQLPAPPQMPLAGFSHSHCGHC*AGAVLG Trigger: TCCCAGAACTGCGCCTGCGCAACAATGGCCACAGTG...AGAATGTGAGAAGCCAGCCAGAGGCATCTGAGGGGGAGCCGGTAACTGTCCTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000378357.9 ENST00000617161.1 |
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| CDS-3UTR GCA 90 bp | ACCGGCTCCCCCTCAGATGCCTCTGGCTGGCTTCTCACATTCTCCAAGATCCAGTGCTGCCTTCTCATCTaGACAAGGAACGCGACGCTG | + |
|
Preference number: 4 (lower is better) Translates to: TGSPSDASGWLLTFSKIQCCLLI*TRNATL Trigger: CAGCGTCGCGTTCCTTGTGCAGATGAGAAGGCAGCA...CTGGATCTTGGAGAATGTGAGAAGCCAGCCAGAGGCATCTGAGGGGGAGCCGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000378357.9 ENST00000617161.1 |
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| CDS-3UTR CCA 90 bp | GTGCTGCCTTCTCATCTGCACAAGGAACGCGACGCTGGTGACAGCAAAAAGGAGTTGCACAGTGAGGCCTaGAGCAGGGGCCGGGATCAA | + |
|
Preference number: 4 (lower is better) Translates to: VLPSHLHKERDAGDSKKELHSEA*SRGRDQ Trigger: TTGATCCCGGCCCCTGCTCCAGGCCTCACTGTGCAA...CTCCTTTTTGCTGTCACCAGCGTCGCGTTCCTTGTGCAGATGAGAAGGCAGCAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000617161.1 |
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| CDS-3UTR CCA 90 bp | TGCTGCCTTCTCATCTGCACAAGGAACGCGACGCTGGTGACAGCAAAAAGGAGGATCCGGGGCAACCTCTaGGGATGGACAGGCACCAGA | + |
|
Preference number: 4 (lower is better) Translates to: CCLLICTRNATLVTAKRRIRGNL*GWTGTR Trigger: TCTGGTGCCTGTCCATCCCCAGAGGTTGCCCCGGAT...CCTCCTTTTTGCTGTCACCAGCGTCGCGTTCCTTGTGCAGATGAGAAGGCAGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000617161.1 |
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| CDS-3UTR CCA 90 bp | ACCGGCTCCCCCTCAGATGCCTCTGGCTGGCTTCTCACATTCTCCAAGATCCAGATCCTCCTCGCCCAGTaGGTCATCTTCCCCAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: TGSPSDASGWLLTFSKIQILLAQ*VIFPRR Trigger: TCTTCTGGGGAAGATGACCCACTGGGCGAGGAGGAT...CTGGATCTTGGAGAATGTGAGAAGCCAGCCAGAGGCATCTGAGGGGGAGCCGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000378357.9 ENST00000617161.1 |
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| CDS-3UTR CCA 90 bp | CAGGACAGTTACCGGCTCCCCCTCAGATGCCTCTGGCTGGCTTCTCACATTCTCGTGAATCCTCTTCACTaGGCAGATCCTCCTCGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: QDSYRLPLRCLWLASHILVNPLH*ADPPRP Trigger: TGGGCGAGGAGGATCTGCCCAGTGAAGAGGATTCAC...GAGAATGTGAGAAGCCAGCCAGAGGCATCTGAGGGGGAGCCGGTAACTGTCCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000378357.9 ENST00000617161.1 |
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| CDS-3UTR CCA 90 bp | ACAGGACAGTTACCGGCTCCCCCTCAGATGCCTCTGGCTGGCTTCTCACATTCTGTCAGTTGCACACTGTaGCCATTGTTGCGCAGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: TGQLPAPPQMPLAGFSHSVSCTL*PLLRRR Trigger: GCGCCTGCGCAACAATGGCCACAGTGTGCAACTGAC...AGAATGTGAGAAGCCAGCCAGAGGCATCTGAGGGGGAGCCGGTAACTGTCCTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000378357.9 ENST00000617161.1 |
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| CDS-3UTR CCA 90 bp | AGTTACCGGCTCCCCCTCAGATGCCTCTGGCTGGCTTCTCACATTCTCCAAGATGTCCAGATGACACCCTaGGCACAGGGCGGTGTAGTC | + |
|
Preference number: 4 (lower is better) Translates to: SYRLPLRCLWLASHILQDVQMTP*AQGGVV Trigger: GACTACACCGCCCTGTGCCCAGGGTGTCATCTGGAC...ATCTTGGAGAATGTGAGAAGCCAGCCAGAGGCATCTGAGGGGGAGCCGGTAACT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000378357.9 ENST00000617161.1 |
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| CDS-3UTR CCA 90 bp | ACAGGACAGTTACCGGCTCCCCCTCAGATGCCTCTGGCTGGCTTCTCACATTCTAGCTCACACCCCCTTTaGTTCCCCTTCTGTGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: TGQLPAPPQMPLAGFSHSSSHPL*FPFCAA Trigger: GGCAGCACAGAAGGGGAACCAAAGGGGGTGTGAGCT...AGAATGTGAGAAGCCAGCCAGAGGCATCTGAGGGGGAGCCGGTAACTGTCCTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000378357.9 ENST00000617161.1 |
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| CDS-3UTR TCA 90 bp | AGTTACCGGCTCCCCCTCAGATGCCTCTGGCTGGCTTCTCACATTCTCCAAGATGGAACGCGACGCTGGTaGCAGCAAAAAGGAGGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: SYRLPLRCLWLASHILQDGTRRW*QQKGGQ Trigger: TTGGCCTCCTTTTTGCTGTCACCAGCGTCGCGTTCC...ATCTTGGAGAATGTGAGAAGCCAGCCAGAGGCATCTGAGGGGGAGCCGGTAACT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000378357.9 ENST00000617161.1 |
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| CDS-3UTR GCA 90 bp | GTGCTGCCTTCTCATCTGCACAAGGAACGCGACGCTGGTGACAGCAAAAAGGAGCACTGTGGCCATTGTTaGGCAGGCGCAGTTCTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: VLPSHLHKERDAGDSKKEHCGHC*AGAVLG Trigger: TCCCAGAACTGCGCCTGCGCAACAATGGCCACAGTG...CTCCTTTTTGCTGTCACCAGCGTCGCGTTCCTTGTGCAGATGAGAAGGCAGCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000617161.1 |
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| CDS-3UTR GCA 90 bp | CAGTTACCGGCTCCCCCTCAGATGCCTCTGGCTGGCTTCTCACATTCTCCAAGAGTCAGAGGGCAGGAGTaGAGATATGTCCAGTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: QLPAPPQMPLAGFSHSPRVRGQE*RYVQSW Trigger: CCAGGACTGGACATATCTGCACTCCTGCCCTCTGAC...TCTTGGAGAATGTGAGAAGCCAGCCAGAGGCATCTGAGGGGGAGCCGGTAACTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000378357.9 ENST00000617161.1 |
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| CDS-3UTR GCA 90 bp | CAGGACAGTTACCGGCTCCCCCTCAGATGCCTCTGGCTGGCTTCTCACATTCTCGTTCCCCTTCTGTGCTaGCTTCTCATCTGCACAAGG | + |
|
Preference number: 4 (lower is better) Translates to: QDSYRLPLRCLWLASHILVPLLC*LLICTR Trigger: CCTTGTGCAGATGAGAAGGCAGCACAGAAGGGGAAC...GAGAATGTGAGAAGCCAGCCAGAGGCATCTGAGGGGGAGCCGGTAACTGTCCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000378357.9 ENST00000617161.1 |
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| CDS-3UTR CCA 90 bp | ATCTGCACAAGGAACGCGACGCTGGTGACAGCAAAAAGGAGGCCAAAAACCAGGTCGGCAGGGAAACGGTaGCCTTCCACAGTGTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: ICTRNATLVTAKRRPKTRSAGKR*PSTVCS Trigger: GGAGCACACTGTGGAAGGCCACCGTTTCCCTGCCGA...CCTGGTTTTTGGCCTCCTTTTTGCTGTCACCAGCGTCGCGTTCCTTGTGCAGAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000617161.1 |
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| CDS-3UTR CCA 90 bp | CTCATCTGCACAAGGAACGCGACGCTGGTGACAGCAAAAAGGAGGCCAAAAACCGTCCAGATGACACCCTaGGCACAGGGCGGTGTAGTC | + |
|
Preference number: 4 (lower is better) Translates to: LICTRNATLVTAKRRPKTVQMTP*AQGGVV Trigger: GACTACACCGCCCTGTGCCCAGGGTGTCATCTGGAC...GGTTTTTGGCCTCCTTTTTGCTGTCACCAGCGTCGCGTTCCTTGTGCAGATGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000617161.1 |
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| CDS-3UTR GCA 90 bp | AGTTACCGGCTCCCCCTCAGATGCCTCTGGCTGGCTTCTCACATTCTCCAAGATAGTGACAGCAGCAGTTaGACAGTGAGGCCTGGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SYRLPLRCLWLASHILQDSDSSS*TVRPGA Trigger: TGCTCCAGGCCTCACTGTGCAACTGCTGCTGTCACT...ATCTTGGAGAATGTGAGAAGCCAGCCAGAGGCATCTGAGGGGGAGCCGGTAACT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000378357.9 ENST00000617161.1 |
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| CDS-3UTR GCA 90 bp | ACAGGACAGTTACCGGCTCCCCCTCAGATGCCTCTGGCTGGCTTCTCACATTCTGTTCCCCTTCTGTGCTaGCTTCTCATCTGCACAAGG | + |
|
Preference number: 4 (lower is better) Translates to: TGQLPAPPQMPLAGFSHSVPLLC*LLICTR Trigger: CCTTGTGCAGATGAGAAGGCAGCACAGAAGGGGAAC...AGAATGTGAGAAGCCAGCCAGAGGCATCTGAGGGGGAGCCGGTAACTGTCCTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000378357.9 ENST00000617161.1 |
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| CDS-3UTR GCA 90 bp | TGGCATAATGAGCAGGACAGGACAGTTACCGGCTCCCCCTCAGATGCCTCTGGCTTGGTTCCCCTTCTGTaGTGCCTTCTCATCTGCACA | + |
|
Preference number: 4 (lower is better) Translates to: WHNEQDRTVTGSPSDASGLVPLL*CLLICT Trigger: TGTGCAGATGAGAAGGCAGCACAGAAGGGGAACCAA...GCCAGAGGCATCTGAGGGGGAGCCGGTAACTGTCCTGTCCTGCTCATTATGCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000378357.9 ENST00000617161.1 |
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| CDS-3UTR CCA 90 bp | TCCCCCTCAGATGCCTCTGGCTGGCTTCTCACATTCTCCAAGATCCAGCCTCTAATCCTCCTCGCCCAGTaGGTCATCTTCCCCAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: SPSDASGWLLTFSKIQPLILLAQ*VIFPRR Trigger: TCTTCTGGGGAAGATGACCCACTGGGCGAGGAGGAT...TAGAGGCTGGATCTTGGAGAATGTGAGAAGCCAGCCAGAGGCATCTGAGGGGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000617161.1 |
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| CDS-3UTR TCA 90 bp | AGGACAGGACAGTTACCGGCTCCCCCTCAGATGCCTCTGGCTGGCTTCTCACATGGAGCCCTCTTCTTCTaGTTTAGGCTTAACTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: RTGQLPAPPQMPLAGFSHGALFF*FRLNFR Trigger: CCTGAAGTTAAGCCTAAATCAGAAGAAGAGGGCTCC...ATGTGAGAAGCCAGCCAGAGGCATCTGAGGGGGAGCCGGTAACTGTCCTGTCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000378357.9 ENST00000617161.1 |
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| CDS-3UTR TCA 90 bp | CAGTTACCGGCTCCCCCTCAGATGCCTCTGGCTGGCTTCTCACATTCTCCAAGATTATTCTGGGGTTCTTaGGGATCTCCAGGAGCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: QLPAPPQMPLAGFSHSPRLFWGS*GSPGAS Trigger: TGAGGCTCCTGGAGATCCTCAAGAACCCCAGAATAA...TCTTGGAGAATGTGAGAAGCCAGCCAGAGGCATCTGAGGGGGAGCCGGTAACTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000378357.9 ENST00000617161.1 |
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| CDS-3UTR TCA 90 bp | CTCATCTGCACAAGGAACGCGACGCTGGTGACAGCAAAAAGGAGGCCAAAAACCTGGGACCTGAGTCTCTaGGCCTTCCTCAGCGATTTC | + |
|
Preference number: 4 (lower is better) Translates to: LICTRNATLVTAKRRPKTWDLSL*AFLSDF Trigger: GAAATCGCTGAGGAAGGCTCAGAGACTCAGGTCCCA...GGTTTTTGGCCTCCTTTTTGCTGTCACCAGCGTCGCGTTCCTTGTGCAGATGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000617161.1 |
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| CDS-3UTR GCA 90 bp | CTCATCTGCACAAGGAACGCGACGCTGGTGACAGCAAAAAGGAGGCCAAAAACCAGTGACAGCAGCAGTTaGACAGTGAGGCCTGGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LICTRNATLVTAKRRPKTSDSSS*TVRPGA Trigger: TGCTCCAGGCCTCACTGTGCAACTGCTGCTGTCACT...GGTTTTTGGCCTCCTTTTTGCTGTCACCAGCGTCGCGTTCCTTGTGCAGATGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000617161.1 |
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| CDS-3UTR GCA 90 bp | CTCATCTGCACAAGGAACGCGACGCTGGTGACAGCAAAAAGGAGGCCAAAAACCGTCAGAGGGCAGGAGTaGAGATATGTCCAGTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LICTRNATLVTAKRRPKTVRGQE*RYVQSW Trigger: CCAGGACTGGACATATCTGCACTCCTGCCCTCTGAC...GGTTTTTGGCCTCCTTTTTGCTGTCACCAGCGTCGCGTTCCTTGTGCAGATGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000617161.1 |
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| CDS-3UTR GCA 90 bp | CTCATCTGCACAAGGAACGCGACGCTGGTGACAGCAAAAAGGAGGCCAAAAACCTGCTGCCTTCTCATCTaGACAAGGAACGCGACGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LICTRNATLVTAKRRPKTCCLLI*TRNATL Trigger: CAGCGTCGCGTTCCTTGTGCAGATGAGAAGGCAGCA...GGTTTTTGGCCTCCTTTTTGCTGTCACCAGCGTCGCGTTCCTTGTGCAGATGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000617161.1 |
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| CDS-3UTR GCA 90 bp | CAGTTACCGGCTCCCCCTCAGATGCCTCTGGCTGGCTTCTCACATTCTCCAAGATTGGTTCCCCTTCTGTaGTGCCTTCTCATCTGCACA | + |
|
Preference number: 4 (lower is better) Translates to: QLPAPPQMPLAGFSHSPRLVPLL*CLLICT Trigger: TGTGCAGATGAGAAGGCAGCACAGAAGGGGAACCAA...TCTTGGAGAATGTGAGAAGCCAGCCAGAGGCATCTGAGGGGGAGCCGGTAACTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000378357.9 ENST00000617161.1 |
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| CDS-3UTR CCA 90 bp | AGGACAGGACAGTTACCGGCTCCCCCTCAGATGCCTCTGGCTGGCTTCTCACATCCTTCTTTGTCCCTGTaGGCATTATTCTGGGGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: RTGQLPAPPQMPLAGFSHPSLSL*ALFWGS Trigger: AGAACCCCAGAATAATGCCCACAGGGACAAAGAAGG...ATGTGAGAAGCCAGCCAGAGGCATCTGAGGGGGAGCCGGTAACTGTCCTGTCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000378357.9 ENST00000617161.1 |
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| CDS-3UTR CCA 90 bp | CAGGACAGTTACCGGCTCCCCCTCAGATGCCTCTGGCTGGCTTCTCACATTCTCCTCAGCATCACTGTCTaGTTAAACACAGTCCAGATG | + |
|
Preference number: 4 (lower is better) Translates to: QDSYRLPLRCLWLASHILLSITV*LNTVQM Trigger: CATCTGGACTGTGTTTAACCAGACAGTGATGCTGAG...GAGAATGTGAGAAGCCAGCCAGAGGCATCTGAGGGGGAGCCGGTAACTGTCCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000378357.9 ENST00000617161.1 |
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| CDS-3UTR CCA 90 bp | TCCCCCTCAGATGCCTCTGGCTGGCTTCTCACATTCTCCAAGATCCAGCCTCTACCTTCTTTGTCCCTGTaGGCATTATTCTGGGGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SPSDASGWLLTFSKIQPLPSLSL*ALFWGS Trigger: AGAACCCCAGAATAATGCCCACAGGGACAAAGAAGG...TAGAGGCTGGATCTTGGAGAATGTGAGAAGCCAGCCAGAGGCATCTGAGGGGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000617161.1 |
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| CDS-3UTR CCA 90 bp | CCTTCTGTGCTGCCTTCTCATCTGCACAAGGAACGCGACGCTGGTGACAGCAAACTCAGCATCACTGTCTaGTTAAACACAGTCCAGATG | + |
|
Preference number: 4 (lower is better) Translates to: PSVLPSHLHKERDAGDSKLSITV*LNTVQM Trigger: CATCTGGACTGTGTTTAACCAGACAGTGATGCTGAG...TTTGCTGTCACCAGCGTCGCGTTCCTTGTGCAGATGAGAAGGCAGCACAGAAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000617161.1 |
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| CDS GCA 90 bp | CTCTGGGGATGGACAGGCACCAGAAGCAGCAGTGACAGCAGCAGTTaGACAGTGAGGCCTGGAGCAGGGGCCGGGATCAACAGAGGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: LWGWTGTRSSSDSSS*TVRPGAGAGINRGS Trigger: GCTCCCTCTGTTGATCCCGGCCCCTGCTCCAGGCCTCACTGTGCAACTGCTGCTGTCACTGCTGCTTCTGGTGCCTGTCCATCCCCAGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000378357.9 ENST00000617161.1 |
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| CDS CCA 90 bp | GAGCCTCCTCCCAAGGGGGAATCCTCCTGCATCCGGGGCAACCTCTaGGGATGGACAGGCACCAGAAGCAGCAGTGACAGCAGCAGTTGC | + |
|
Preference number: 5 (lower is better) Translates to: EPPPKGESSCIRGNL*GWTGTRSSSDSSSC Trigger: GCAACTGCTGCTGTCACTGCTGCTTCTGGTGCCTGTCCATCCCCAGAGGTTGCCCCGGATGCAGGAGGATTCCCCCTTGGGAGGAGGCTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000378357.9 ENST00000617161.1 |
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| CDS GCA 90 bp | ACTCCAGCAGGGAAGGAGGCCTCAATCACTCGCCCATTCAAAGGCTaGGTCGCTCGGAAGTTCAGCTGTAGCCGAGAGTCACCAGGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: TPAGKEASITRPFKG*VARKFSCSRESPGP Trigger: GGGACCTGGTGACTCTCGGCTACAGCTGAACTTCCGAGCGACGCAGCCTTTGAATGGGCGAGTGATTGAGGCCTCCTTCCCTGCTGGAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000378357.9 ENST00000493245.1 |
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| CDS-3UTR CAA 90 bp | ATAATGAGCAGGACAGGACAGTTACCGGCTCCCCCTCAGATGCCTCTGGCTGGCACACTGTGGCCATTGTaGCGCAGGCGCAGTTCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: IMSRTGQLPAPPQMPLAGTLWPL*RRRSSG Trigger: CCCAGAACTGCGCCTGCGCAACAATGGCCACAGTGT...GCCAGCCAGAGGCATCTGAGGGGGAGCCGGTAACTGTCCTGTCCTGCTCATTAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000378357.9 ENST00000617161.1 |
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| CDS-3UTR CAA 90 bp | ATGAGCAGGACAGGACAGTTACCGGCTCCCCCTCAGATGCCTCTGGCTGGCTTCTGCACACTGTGGCCATaGTTGCGCAGGCGCAGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: MSRTGQLPAPPQMPLAGFCTLWP*LRRRSS Trigger: AGAACTGCGCCTGCGCAACAATGGCCACAGTGTGCA...GAAGCCAGCCAGAGGCATCTGAGGGGGAGCCGGTAACTGTCCTGTCCTGCTCAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000378357.9 ENST00000617161.1 |
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| CDS-3UTR CAA 90 bp | ATAATGAGCAGGACAGGACAGTTACCGGCTCCCCCTCAGATGCCTCTGGCTGGCTGCACACTGTGGCCATaGTTGCGCAGGCGCAGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: IMSRTGQLPAPPQMPLAGCTLWP*LRRRSS Trigger: AGAACTGCGCCTGCGCAACAATGGCCACAGTGTGCA...GCCAGCCAGAGGCATCTGAGGGGGAGCCGGTAACTGTCCTGTCCTGCTCATTAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000378357.9 ENST00000617161.1 |
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| CDS-3UTR CAA 90 bp | TCCAGTCTCGGCTACCTCTGCTGGGCGGTAGCTCACACCCCCTTTGGTTCCCCTCAGAGACCCCTCATATaGGAAGTAGCGGCTGAAGTC | + |
|
Preference number: 5 (lower is better) Translates to: SSLGYLCWAVAHTPFGSPQRPLI*EVAAEV Trigger: GACTTCAGCCGCTACTTCCAATATGAGGGGTCTCTG...AGGGGAACCAAAGGGGGTGTGAGCTACCGCCCAGCAGAGGTAGCCGAGACTGGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000617161.1 |
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| CDS-3UTR CAA 90 bp | GGCTCCCCCTCAGATGCCTCTGGCTGGCTTCTCACATTCTCCAAGATCCAGCCTAGGAGGCAGGGTCAGTaGCACACTGTGGCCATTGTT | + |
|
Preference number: 5 (lower is better) Translates to: GSPSDASGWLLTFSKIQPRRQGQ*HTVAIV Trigger: AACAATGGCCACAGTGTGCAACTGACCCTGCCTCCT...AGGCTGGATCTTGGAGAATGTGAGAAGCCAGCCAGAGGCATCTGAGGGGGAGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000378357.9 ENST00000617161.1 |
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| CDS-3UTR CAA 90 bp | TGGCATAATGAGCAGGACAGGACAGTTACCGGCTCCCCCTCAGATGCCTCTGGCAGGAGGCAGGGTCAGTaGCACACTGTGGCCATTGTT | + |
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Preference number: 5 (lower is better) Translates to: WHNEQDRTVTGSPSDASGRRQGQ*HTVAIV Trigger: AACAATGGCCACAGTGTGCAACTGACCCTGCCTCCT...GCCAGAGGCATCTGAGGGGGAGCCGGTAACTGTCCTGTCCTGCTCATTATGCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000378357.9 ENST00000617161.1 |
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| CDS-3UTR CAA 90 bp | CAGGACAGGACAGTTACCGGCTCCCCCTCAGATGCCTCTGGCTGGCTTCTCACACAGAGACCCCTCATATaGGAAGTAGCGGCTGAAGTC | + |
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Preference number: 5 (lower is better) Translates to: QDRTVTGSPSDASGWLLTQRPLI*EVAAEV Trigger: GACTTCAGCCGCTACTTCCAATATGAGGGGTCTCTG...TGTGAGAAGCCAGCCAGAGGCATCTGAGGGGGAGCCGGTAACTGTCCTGTCCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000378357.9 ENST00000617161.1 |
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| CDS TCA 90 bp | CCCTTCTGTGCTGCCTTCTCATCTGCACAAGGAACGCGACGCTGGTaGCAGCAAAAAGGAGGCCAAAAACCAGGGCTAGGATGTCACCAG | + |
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Preference number: 5 (lower is better) Translates to: PFCAAFSSAQGTRRW*QQKGGQKPGLGCHQ Trigger: CTGGTGACATCCTAGCCCTGGTTTTTGGCCTCCTTTTTGCTGTCACCAGCGTCGCGTTCCTTGTGCAGATGAGAAGGCAGCACAGAAGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000378357.9 ENST00000493245.1 |
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| CDS TCA 90 bp | CCCTTCTGTGCTGCCTTCTCATCTGCACAAGGAACGCGACGCTGGTaGCAGCAAAAAGGAGGCCAAAAACCAGGGCTAGGATGTCACCTG | + |
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Preference number: 5 (lower is better) Translates to: PFCAAFSSAQGTRRW*QQKGGQKPGLGCHL Trigger: CAGGTGACATCCTAGCCCTGGTTTTTGGCCTCCTTTTTGCTGTCACCAGCGTCGCGTTCCTTGTGCAGATGAGAAGGCAGCACAGAAGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000485665.1 |
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| CDS TCA 90 bp | CCCTTCTGTGCTGCCTTCTCATCTGCACAAGGAACGCGACGCTGGTaGCAGCAAAAAGGAGGCCAAAAACCAGGGCTAGGACTGCTTAGC | + |
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Preference number: 5 (lower is better) Translates to: PFCAAFSSAQGTRRW*QQKGGQKPGLGLLS Trigger: GCTAAGCAGTCCTAGCCCTGGTTTTTGGCCTCCTTTTTGCTGTCACCAGCGTCGCGTTCCTTGTGCAGATGAGAAGGCAGCACAGAAGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000617161.1 |
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| CDS CCA 90 bp | GTGTCAGAGAGGGTGTGGAGCTGCTTAGCACTCAGCATCACTGTCTaGTTAAACACAGTCCAGATGACACCCTGGGCACAGGGCGGTGTA | + |
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Preference number: 5 (lower is better) Translates to: VSERVWSCLALSITV*LNTVQMTPWAQGGV Trigger: TACACCGCCCTGTGCCCAGGGTGTCATCTGGACTGTGTTTAACCAGACAGTGATGCTGAGTGCTAAGCAGCTCCACACCCTCTCTGACAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000378357.9 ENST00000493245.1 |
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| CDS-3UTR CAA 90 bp | GGCATAATGAGCAGGACAGGACAGTTACCGGCTCCCCCTCAGATGCCTCTGGCTATTATTCTGGGGTTCTaGAGGATCTCCAGGAGCCTC | + |
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Preference number: 5 (lower is better) Translates to: GIMSRTGQLPAPPQMPLAIILGF*RISRSL Trigger: GAGGCTCCTGGAGATCCTCAAGAACCCCAGAATAAT...AGCCAGAGGCATCTGAGGGGGAGCCGGTAACTGTCCTGTCCTGCTCATTATGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000378357.9 ENST00000617161.1 |
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| CDS-3UTR CAA 90 bp | GCTCCCCCTCAGATGCCTCTGGCTGGCTTCTCACATTCTCCAAGATCCAGCCTCATTATTCTGGGGTTCTaGAGGATCTCCAGGAGCCTC | + |
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Preference number: 5 (lower is better) Translates to: APPQMPLAGFSHSPRSSLIILGF*RISRSL Trigger: GAGGCTCCTGGAGATCCTCAAGAACCCCAGAATAAT...GAGGCTGGATCTTGGAGAATGTGAGAAGCCAGCCAGAGGCATCTGAGGGGGAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000617161.1 |
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| CDS-3UTR CAA 90 bp | CAGGACAGTTACCGGCTCCCCCTCAGATGCCTCTGGCTGGCTTCTCACATTCTCTGGTCATCCCCTTCTTaGTCCCTGTGGGCATTATTC | + |
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Preference number: 5 (lower is better) Translates to: QDSYRLPLRCLWLASHILWSSPS*SLWALF Trigger: GAATAATGCCCACAGGGACAAAGAAGGGGATGACCA...GAGAATGTGAGAAGCCAGCCAGAGGCATCTGAGGGGGAGCCGGTAACTGTCCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000378357.9 ENST00000617161.1 |
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| CDS-3UTR CAA 90 bp | ACAGGACAGTTACCGGCTCCCCCTCAGATGCCTCTGGCTGGCTTCTCACATTCTTGGTCATCCCCTTCTTaGTCCCTGTGGGCATTATTC | + |
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Preference number: 5 (lower is better) Translates to: TGQLPAPPQMPLAGFSHSWSSPS*SLWALF Trigger: GAATAATGCCCACAGGGACAAAGAAGGGGATGACCA...AGAATGTGAGAAGCCAGCCAGAGGCATCTGAGGGGGAGCCGGTAACTGTCCTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000378357.9 ENST00000617161.1 |
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| CDS CCA 72 bp | CCCAAGGGGGAATCCTCCTGCATCCGGGGCAACCTCTaGGGATGGACAGGCACCAGAAGCAGCAGTGACAGC | + |
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Preference number: 6 (lower is better) Translates to: PKGESSCIRGNL*GWTGTRSSSDS Trigger: GCTGTCACTGCTGCTTCTGGTGCCTGTCCATCCCCAGAGGTTGCCCCGGATGCAGGAGGATTCCCCCTTGGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000378357.9 ENST00000617161.1 |
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| CDS TCA 72 bp | GCCCCAAGGCCTCGTCAACTCTGGCAAAGGCGGTGCTaGGGTGAACCACGTGGATCTCGGCAGGGAAACGGT | + |
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Preference number: 6 (lower is better) Translates to: APRPRQLWQRRC*GEPRGSRQGNG Trigger: ACCGTTTCCCTGCCGAGATCCACGTGGTTCACCTCAGCACCGCCTTTGCCAGAGTTGACGAGGCCTTGGGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000378357.9 ENST00000617161.1 |
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| CDS TCA 72 bp | AAGGCCTCGTCAACTCTGGCAAAGGCGGTGCTGAGGTaGACCACGTGGATCTCGGCAGGGAAACGGTGGCCT | + |
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Preference number: 6 (lower is better) Translates to: KASSTLAKAVLR*TTWISAGKRWP Trigger: AGGCCACCGTTTCCCTGCCGAGATCCACGTGGTTCACCTCAGCACCGCCTTTGCCAGAGTTGACGAGGCCTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000378357.9 ENST00000617161.1 |
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| CDS CAA 72 bp | CTGGGCACAGGGCGGTGTAGTCAGAGACCCCTCATATaGGAAGTAGCGGCTGAAGTCAGAGGGCAGGAGTGC | + |
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Preference number: 6 (lower is better) Translates to: LGTGRCSQRPLI*EVAAEVRGQEC Trigger: GCACTCCTGCCCTCTGACTTCAGCCGCTACTTCCAATATGAGGGGTCTCTGACTACACCGCCCTGTGCCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000378357.9 ENST00000493245.1 ENST00000617161.1 |
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| CDS GCA 72 bp | GGGAAGGAGGCCTCAATCACTCGCCCATTCAAAGGCTaGGTCGCTCGGAAGTTCAGCTGTAGCCGAGAGTCA | + |
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Preference number: 6 (lower is better) Translates to: GKEASITRPFKG*VARKFSCSRES Trigger: TGACTCTCGGCTACAGCTGAACTTCCGAGCGACGCAGCCTTTGAATGGGCGAGTGATTGAGGCCTCCTTCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000378357.9 ENST00000493245.1 |
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| CDS CAA 90 bp | GATGACACCCTGGGCACAGGGCGGTGTAGTCAGAGACCCCTCATATaGGAAGTAGCGGCTGAAGTCAGAGGGCAGGAGTGCAGATATGTC | + |
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Preference number: 6 (lower is better) Translates to: DDTLGTGRCSQRPLI*EVAAEVRGQECRYV Trigger: GACATATCTGCACTCCTGCCCTCTGACTTCAGCCGCTACTTCCAATATGAGGGGTCTCTGACTACACCGCCCTGTGCCCAGGGTGTCATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000378357.9 ENST00000493245.1 ENST00000617161.1 |
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| CDS TCA 72 bp | GCTGCCTTCTCATCTGCACAAGGAACGCGACGCTGGTaGCAGCAAAAAGGAGGCCAAAAACCAGGGCTAGGA | + |
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Preference number: 6 (lower is better) Translates to: AAFSSAQGTRRW*QQKGGQKPGLG Trigger: TCCTAGCCCTGGTTTTTGGCCTCCTTTTTGCTGTCACCAGCGTCGCGTTCCTTGTGCAGATGAGAAGGCAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENST00000378357.9 ENST00000485665.1 ENST00000493245.1 ENST00000617161.1 |
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| CDS CCA 72 bp | AGGGTGTGGAGCTGCTTAGCACTCAGCATCACTGTCTaGTTAAACACAGTCCAGATGACACCCTGGGCACAG | + |
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Preference number: 6 (lower is better) Translates to: RVWSCLALSITV*LNTVQMTPWAQ Trigger: CTGTGCCCAGGGTGTCATCTGGACTGTGTTTAACCAGACAGTGATGCTGAGTGCTAAGCAGCTCCACACCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000378357.9 ENST00000493245.1 |
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| CDS CCA 72 bp | ATCACTGTCTGGTTAAACACAGTCCAGATGACACCCTaGGCACAGGGCGGTGTAGTCAGAGACCCCTCATAT | + |
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Preference number: 6 (lower is better) Translates to: ITVWLNTVQMTP*AQGGVVRDPSY Trigger: ATATGAGGGGTCTCTGACTACACCGCCCTGTGCCCAGGGTGTCATCTGGACTGTGTTTAACCAGACAGTGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000378357.9 ENST00000493245.1 ENST00000617161.1 |
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