Pregenerated sensors for CA8 (Homo sapiens)
Ensembl gene IDs: ENSG00000178538Ensembl transcript IDs: ENST00000317995.5, ENST00000524872.5, ENST00000528666.1, ENST00000529918.1
Found 146 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGAAGTCCAGGACCTCTCTCCGCTTTCAGAGGCACTGCCTGGTGCTaGCCCCATGTGATCCAGGGCTACCAACAGATCTCAACCCTTAGC | + |
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Preference number: 1 (lower is better) Translates to: GSPGPLSAFRGTAWC*PHVIQGYQQISTLS Trigger: GCTAAGGGTTGAGATCTGTTGGTAGCCCTGGATCACATGGGGTCAGCACCAGGCAGTGCCTCTGAAAGCGGAGAGAGGTCCTGGACTTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000317995.5 |
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| 3UTR CCA 90 bp | CAATCCCTGACTGTTCAGCACCAACCCGGTCAGGAGTGGAGAGGCTaGTACCTGTGCAGTGTTTTGTTCCAGGAATGCCATATGAATGGC | + |
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Preference number: 1 (lower is better) Translates to: QSLTVQHQPGQEWRG*YLCSVLFQECHMNG Trigger: GCCATTCATATGGCATTCCTGGAACAAAACACTGCACAGGTACCAGCCTCTCCACTCCTGACCGGGTTGGTGCTGAACAGTCAGGGATTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000317995.5 |
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| 3UTR GCA 90 bp | ACTGTTCAGCACCAACCCGGTCAGGAGTGGAGAGGCTGGTACCTGTaGAGTGTTTTGTTCCAGGAATGCCATATGAATGGCCTCTCATTT | + |
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Preference number: 1 (lower is better) Translates to: TVQHQPGQEWRGWYL*SVLFQECHMNGLSF Trigger: AAATGAGAGGCCATTCATATGGCATTCCTGGAACAAAACACTGCACAGGTACCAGCCTCTCCACTCCTGACCGGGTTGGTGCTGAACAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000317995.5 |
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| 3UTR GCA 90 bp | ACCAACAGATCTCAACCCTTAGCAAGCCTCAACTTTTCCACACATTaGCATAACCCTAGTCCTTTCTCTTGCTGCCCAAGAATACATGAT | + |
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Preference number: 1 (lower is better) Translates to: TNRSQPLASLNFSTH*HNPSPFSCCPRIHD Trigger: ATCATGTATTCTTGGGCAGCAAGAGAAAGGACTAGGGTTATGGCAATGTGTGGAAAAGTTGAGGCTTGCTAAGGGTTGAGATCTGTTGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000317995.5 |
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| 3UTR CCA 90 bp | TTTTTGTCACAGTTTTGTAACCATGCTTCACCGTTTCCTCATTGTTaGACACTAGGAACTGTTATACACAAGGGAAGTCCAGGACCTCTC | + |
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Preference number: 1 (lower is better) Translates to: FLSQFCNHASPFPHC*TLGTVIHKGSPGPL Trigger: GAGAGGTCCTGGACTTCCCTTGTGTATAACAGTTCCTAGTGTCCAACAATGAGGAAACGGTGAAGCATGGTTACAAAACTGTGACAAAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000317995.5 |
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| 3UTR GCA 90 bp | AGCCTCAACTTTTCCACACATTGCCATAACCCTAGTCCTTTCTCTTaGTGCCCAAGAATACATGATGAACTTTCTTTGCTTGAATTTCAG | + |
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Preference number: 1 (lower is better) Translates to: SLNFSTHCHNPSPFS*CPRIHDELSLLEFQ Trigger: CTGAAATTCAAGCAAAGAAAGTTCATCATGTATTCTTGGGCAGCAAGAGAAAGGACTAGGGTTATGGCAATGTGTGGAAAAGTTGAGGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000317995.5 |
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| 3UTR TCA 90 bp | TTAATTACAAATAAGGCTGCACGTGTGCAGCCAATGTTTGGCATGTaGGTGGTAACAGTGCTAGATGTAAATATTTTTGTCACAGTTTTG | + |
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Preference number: 1 (lower is better) Translates to: LITNKAARVQPMFGM*VVTVLDVNIFVTVL Trigger: CAAAACTGTGACAAAAATATTTACATCTAGCACTGTTACCACTCACATGCCAAACATTGGCTGCACACGTGCAGCCTTATTTGTAATTAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000317995.5 |
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| 3UTR CCA 90 bp | AACACAGCATCCAACAACAGTACAATACATACTCTTAAGTACACATaGATTATTCTGCAGGATAAACCATATGCTAAGCCAGAAAGCAAA | + |
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Preference number: 1 (lower is better) Translates to: NTASNNSTIHTLKYT*IILQDKPYAKPESK Trigger: TTTGCTTTCTGGCTTAGCATATGGTTTATCCTGCAGAATAATCCATGTGTACTTAAGAGTATGTATTGTACTGTTGTTGGATGCTGTGTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000317995.5 |
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| 3UTR-3UTR CCA 90 bp | AATGTCACCAATGGACACCATGATCTGAACCAAGTAGTTCATTTCAGTCTTTTACAACCCGGTCAGGAGTaGAGAGGCTGGTACCTGTGC | + |
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Preference number: 2 (lower is better) Translates to: NVTNGHHDLNQVVHFSLLQPGQE*RGWYLC Trigger: GCACAGGTACCAGCCTCTCCACTCCTGACCGGGTTG...TAAAAGACTGAAATGAACTACTTGGTTCAGATCATGGTGTCCATTGGTGACATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000317995.5 |
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| 3UTR-3UTR TCA 90 bp | TTAGCAAGCCTCAACTTTTCCACACATTGCCATAACCCTAGTCCTTTCTCTTGCGTTGGAGACAGGAAATaGAGAACTACTAACACCGGG | + |
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Preference number: 2 (lower is better) Translates to: LASLNFSTHCHNPSPFSCVGDRK*RTTNTG Trigger: CCCGGTGTTAGTAGTTCTTCATTTCCTGTCTCCAAC...GCAAGAGAAAGGACTAGGGTTATGGCAATGTGTGGAAAAGTTGAGGCTTGCTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000317995.5 |
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| 3UTR-3UTR TCA 90 bp | AATGTCACCAATGGACACCATGATCTGAACCAAGTAGTTCATTTCAGTCTTTTAGGTGCTGACCCCATGTaGTCCAGGGCTACCAACAGA | + |
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Preference number: 2 (lower is better) Translates to: NVTNGHHDLNQVVHFSLLGADPM*SRATNR Trigger: TCTGTTGGTAGCCCTGGATCACATGGGGTCAGCACC...TAAAAGACTGAAATGAACTACTTGGTTCAGATCATGGTGTCCATTGGTGACATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000317995.5 |
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| 3UTR-3UTR TCA 90 bp | TTAGCAAGCCTCAACTTTTCCACACATTGCCATAACCCTAGTCCTTTCTCTTGCCAGTATGTGCAACTATaGATCCTAGCAGCAGTAATG | + |
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Preference number: 2 (lower is better) Translates to: LASLNFSTHCHNPSPFSCQYVQL*ILAAVM Trigger: CATTACTGCTGCTAGGATTCATAGTTGCACATACTG...GCAAGAGAAAGGACTAGGGTTATGGCAATGTGTGGAAAAGTTGAGGCTTGCTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000317995.5 |
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| 3UTR-3UTR TCA 90 bp | GTCTTCTATTTCTATGACTTAGATATTCTGCATCACAAAATCCCTCCAAACTGGTGTCTTCCTCCCTCATaGAGACAGACTTGTTCCTGT | + |
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Preference number: 2 (lower is better) Translates to: VFYFYDLDILHHKIPPNWCLPPS*RQTCSC Trigger: ACAGGAACAAGTCTGTCTTCATGAGGGAGGAAGACA...CCAGTTTGGAGGGATTTTGTGATGCAGAATATCTAAGTCATAGAAATAGAAGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000317995.5 |
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| 3UTR-3UTR TCA 90 bp | AATGTCACCAATGGACACCATGATCTGAACCAAGTAGTTCATTTCAGTCTTTTACCAATGTTTGGCATGTaGGTGGTAACAGTGCTAGAT | + |
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Preference number: 2 (lower is better) Translates to: NVTNGHHDLNQVVHFSLLPMFGM*VVTVLD Trigger: ATCTAGCACTGTTACCACTCACATGCCAAACATTGG...TAAAAGACTGAAATGAACTACTTGGTTCAGATCATGGTGTCCATTGGTGACATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000317995.5 |
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| 3UTR CAA 90 bp | CATATGAATGGCCTCTCATTTATGGAAGGCTTCAGATCTAGTCTTTaGATGTTAATTACAAATAAGGCTGCACGTGTGCAGCCAATGTTT | + |
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Preference number: 2 (lower is better) Translates to: HMNGLSFMEGFRSSL*MLITNKAARVQPMF Trigger: AAACATTGGCTGCACACGTGCAGCCTTATTTGTAATTAACATCAAAAGACTAGATCTGAAGCCTTCCATAAATGAGAGGCCATTCATATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000317995.5 |
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| 3UTR-3UTR TCA 90 bp | AATGTCACCAATGGACACCATGATCTGAACCAAGTAGTTCATTTCAGTCTTTTACCTGGTACATGGTGCTaGCCTTCTTTTTATCCTATT | + |
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Preference number: 2 (lower is better) Translates to: NVTNGHHDLNQVVHFSLLPGTWC*PSFYPI Trigger: AATAGGATAAAAAGAAGGTCAGCACCATGTACCAGG...TAAAAGACTGAAATGAACTACTTGGTTCAGATCATGGTGTCCATTGGTGACATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000317995.5 |
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| 3UTR-3UTR CCA 90 bp | AATGTCACCAATGGACACCATGATCTGAACCAAGTAGTTCATTTCAGTCTTTTAATGGCCTCTCATTTATaGAAGGCTTCAGATCTAGTC | + |
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Preference number: 2 (lower is better) Translates to: NVTNGHHDLNQVVHFSLLMASHL*KASDLV Trigger: GACTAGATCTGAAGCCTTCCATAAATGAGAGGCCAT...TAAAAGACTGAAATGAACTACTTGGTTCAGATCATGGTGTCCATTGGTGACATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000317995.5 |
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| 3UTR-3UTR GCA 90 bp | AATGTCACCAATGGACACCATGATCTGAACCAAGTAGTTCATTTCAGTCTTTTAAACTTTTCCACACATTaGCATAACCCTAGTCCTTTC | + |
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Preference number: 2 (lower is better) Translates to: NVTNGHHDLNQVVHFSLLNFSTH*HNPSPF Trigger: GAAAGGACTAGGGTTATGGCAATGTGTGGAAAAGTT...TAAAAGACTGAAATGAACTACTTGGTTCAGATCATGGTGTCCATTGGTGACATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000317995.5 |
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| 3UTR-3UTR GCA 90 bp | GTCTTCTATTTCTATGACTTAGATATTCTGCATCACAAAATCCCTCCAAACTGGTTATTGTTTGCTTTGTaGCAGGTACTCTACTGCTTT | + |
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Preference number: 2 (lower is better) Translates to: VFYFYDLDILHHKIPPNWLLFAL*QVLYCF Trigger: AAAGCAGTAGAGTACCTGGCACAAAGCAAACAATAA...CCAGTTTGGAGGGATTTTGTGATGCAGAATATCTAAGTCATAGAAATAGAAGAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000317995.5 |
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| 3UTR TCA 72 bp | CCGCTTTCAGAGGCACTGCCTGGTGCTGACCCCATGTaGTCCAGGGCTACCAACAGATCTCAACCCTTAGCA | + |
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Preference number: 3 (lower is better) Translates to: PLSEALPGADPM*SRATNRSQPLA Trigger: TGCTAAGGGTTGAGATCTGTTGGTAGCCCTGGATCACATGGGGTCAGCACCAGGCAGTGCCTCTGAAAGCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000317995.5 |
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| 3UTR CCA 72 bp | ACTGTTCAGCACCAACCCGGTCAGGAGTGGAGAGGCTaGTACCTGTGCAGTGTTTTGTTCCAGGAATGCCAT | + |
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Preference number: 3 (lower is better) Translates to: TVQHQPGQEWRG*YLCSVLFQECH Trigger: ATGGCATTCCTGGAACAAAACACTGCACAGGTACCAGCCTCTCCACTCCTGACCGGGTTGGTGCTGAACAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000317995.5 |
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| 3UTR GCA 72 bp | TCTCAACCCTTAGCAAGCCTCAACTTTTCCACACATTaGCATAACCCTAGTCCTTTCTCTTGCTGCCCAAGA | + |
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Preference number: 3 (lower is better) Translates to: SQPLASLNFSTH*HNPSPFSCCPR Trigger: TCTTGGGCAGCAAGAGAAAGGACTAGGGTTATGGCAATGTGTGGAAAAGTTGAGGCTTGCTAAGGGTTGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000317995.5 |
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| 3UTR TCA 72 bp | GGTACCTGTGCAGTGTTTTGTTCCAGGAATGCCATATaGATGGCCTCTCATTTATGGAAGGCTTCAGATCTA | + |
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Preference number: 3 (lower is better) Translates to: GTCAVFCSRNAI*MASHLWKASDL Trigger: TAGATCTGAAGCCTTCCATAAATGAGAGGCCATTCATATGGCATTCCTGGAACAAAACACTGCACAGGTACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000317995.5 |
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| 3UTR CCA 72 bp | CAGTTTTGTAACCATGCTTCACCGTTTCCTCATTGTTaGACACTAGGAACTGTTATACACAAGGGAAGTCCA | + |
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Preference number: 3 (lower is better) Translates to: QFCNHASPFPHC*TLGTVIHKGSP Trigger: TGGACTTCCCTTGTGTATAACAGTTCCTAGTGTCCAACAATGAGGAAACGGTGAAGCATGGTTACAAAACTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000317995.5 |
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| 3UTR TCA 72 bp | AATAAGGCTGCACGTGTGCAGCCAATGTTTGGCATGTaGGTGGTAACAGTGCTAGATGTAAATATTTTTGTC | + |
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Preference number: 3 (lower is better) Translates to: NKAARVQPMFGM*VVTVLDVNIFV Trigger: GACAAAAATATTTACATCTAGCACTGTTACCACTCACATGCCAAACATTGGCTGCACACGTGCAGCCTTATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000317995.5 |
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| 3UTR-3UTR CAA 90 bp | GTCTTCTATTTCTATGACTTAGATATTCTGCATCACAAAATCCCTCCAAACTGGGGCATTATAGGACCATaGTCTTCCTCCCTCATGAAG | + |
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Preference number: 3 (lower is better) Translates to: VFYFYDLDILHHKIPPNWGIIGP*SSSLMK Trigger: CTTCATGAGGGAGGAAGACAATGGTCCTATAATGCC...CCAGTTTGGAGGGATTTTGTGATGCAGAATATCTAAGTCATAGAAATAGAAGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000317995.5 |
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| 3UTR GCA 72 bp | TTTTCCACACATTGCCATAACCCTAGTCCTTTCTCTTaGTGCCCAAGAATACATGATGAACTTTCTTTGCTT | + |
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Preference number: 3 (lower is better) Translates to: FSTHCHNPSPFS*CPRIHDELSLL Trigger: AAGCAAAGAAAGTTCATCATGTATTCTTGGGCAGCAAGAGAAAGGACTAGGGTTATGGCAATGTGTGGAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000317995.5 |
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| 3UTR-3UTR CAA 90 bp | GTCTTCTATTTCTATGACTTAGATATTCTGCATCACAAAATCCCTCCAAACTGGTATTTATTGTTTGCTTaGTGCCAGGTACTCTACTGC | + |
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Preference number: 3 (lower is better) Translates to: VFYFYDLDILHHKIPPNWYLLFA*CQVLYC Trigger: GCAGTAGAGTACCTGGCACAAAGCAAACAATAAATA...CCAGTTTGGAGGGATTTTGTGATGCAGAATATCTAAGTCATAGAAATAGAAGAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000317995.5 |
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| 3UTR-3UTR CAA 90 bp | AATGTCACCAATGGACACCATGATCTGAACCAAGTAGTTCATTTCAGTCTTTTACATTCACTTTGCATTTaGAAGCTCTATGCTGTTCTT | + |
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Preference number: 3 (lower is better) Translates to: NVTNGHHDLNQVVHFSLLHSLCI*KLYAVL Trigger: AAGAACAGCATAGAGCTTCAAAATGCAAAGTGAATG...TAAAAGACTGAAATGAACTACTTGGTTCAGATCATGGTGTCCATTGGTGACATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000317995.5 |
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| 3UTR GCA 72 bp | GTACAATACATACTCTTAAGTACACATGGATTATTCTaGAGGATAAACCATATGCTAAGCCAGAAAGCAAAC | + |
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Preference number: 3 (lower is better) Translates to: VQYILLSTHGLF*RINHMLSQKAN Trigger: GTTTGCTTTCTGGCTTAGCATATGGTTTATCCTGCAGAATAATCCATGTGTACTTAAGAGTATGTATTGTAC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000317995.5 |
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| 3UTR CCA 72 bp | TCCAACAACAGTACAATACATACTCTTAAGTACACATaGATTATTCTGCAGGATAAACCATATGCTAAGCCA | + |
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Preference number: 3 (lower is better) Translates to: SNNSTIHTLKYT*IILQDKPYAKP Trigger: TGGCTTAGCATATGGTTTATCCTGCAGAATAATCCATGTGTACTTAAGAGTATGTATTGTACTGTTGTTGGA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000317995.5 |
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| CDS-3UTR CCA 90 bp | TTAGCAAGCCTCAACTTTTCCACACATTGCCATAACCCTAGTCCTTTCTCTTGCGGAGCGGAGCGCGCGTaGGGGAGTGTGAGCACGCGT | + |
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Preference number: 4 (lower is better) Translates to: LASLNFSTHCHNPSPFSCGAERA*GSVSTR Trigger: ACGCGTGCTCACACTCCCCCACGCGCGCTCCGCTCC...GCAAGAGAAAGGACTAGGGTTATGGCAATGTGTGGAAAAGTTGAGGCTTGCTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000317995.5 |
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| CDS-3UTR GCA 90 bp | CTCAAAAGTTTCCTTTTCTTATCCAAGGGCATTATAGGACCATTGTCTTCCTCCCTCGGCAGCAGTGCCTaGGCCTTCGCTGGGCGCGGG | + |
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Preference number: 4 (lower is better) Translates to: LKSFLFLSKGIIGPLSSSLGSSA*AFAGRG Trigger: CCCGCGCCCAGCGAAGGCGCAGGCACTGCTGCCGAG...GGAGGAAGACAATGGTCCTATAATGCCCTTGGATAAGAAAAGGAAACTTTTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000317995.5 |
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| CDS-3UTR GCA 90 bp | CTCAAAAGTTTCCTTTTCTTATCCAAGGGCATTATAGGACCATTGTCTTCCTCCCGCTCTCGGCAGCAGTaGCTGCGCCTTCGCTGGGCG | + |
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Preference number: 4 (lower is better) Translates to: LKSFLFLSKGIIGPLSSSRSRQQ*LRLRWA Trigger: CGCCCAGCGAAGGCGCAGGCACTGCTGCCGAGAGCG...GGAGGAAGACAATGGTCCTATAATGCCCTTGGATAAGAAAAGGAAACTTTTGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000317995.5 |
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| CDS-3UTR TCA 90 bp | GTCTTCTATTTCTATGACTTAGATATTCTGCATCACAAAATCCCTCCAAACTGGGCGCGTGGGGGAGTGTaGGCACGCGTGAGCGGCAGT | + |
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Preference number: 4 (lower is better) Translates to: VFYFYDLDILHHKIPPNWARGGV*ARVSGS Trigger: ACTGCCGCTCACGCGTGCTCACACTCCCCCACGCGC...CCAGTTTGGAGGGATTTTGTGATGCAGAATATCTAAGTCATAGAAATAGAAGAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000317995.5 |
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| CDS-3UTR CCA 90 bp | AATGTCACCAATGGACACCATGATCTGAACCAAGTAGTTCATTTCAGTCTTTTAAGCTCAGGTCCGCCATaGGAAGGCCGCGGGGCCCCT | + |
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Preference number: 4 (lower is better) Translates to: NVTNGHHDLNQVVHFSLLSSGPP*EGRGAP Trigger: AGGGGCCCCGCGGCCTTCCCATGGCGGACCTGAGCT...TAAAAGACTGAAATGAACTACTTGGTTCAGATCATGGTGTCCATTGGTGACATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000317995.5 |
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| CDS-3UTR CCA 90 bp | AATGTCACCAATGGACACCATGATCTGAACCAAGTAGTTCATTTCAGTCTTTTATTCCAGAGACCCGCGTaGGAAGCGCGTCCGGAGGCC | + |
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Preference number: 4 (lower is better) Translates to: NVTNGHHDLNQVVHFSLLFQRPA*EARPEA Trigger: GGCCTCCGGACGCGCTTCCCACGCGGGTCTCTGGAA...TAAAAGACTGAAATGAACTACTTGGTTCAGATCATGGTGTCCATTGGTGACATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000317995.5 |
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| CDS-3UTR TCA 90 bp | AATGTCACCAATGGACACCATGATCTGAACCAAGTAGTTCATTTCAGTCTTTTAGGCACTGCCTGGTGCTaGCCCCATGTGATCCAGGGC | + |
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Preference number: 4 (lower is better) Translates to: NVTNGHHDLNQVVHFSLLGTAWC*PHVIQG Trigger: GCCCTGGATCACATGGGGTCAGCACCAGGCAGTGCC...TAAAAGACTGAAATGAACTACTTGGTTCAGATCATGGTGTCCATTGGTGACATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000317995.5 |
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| CDS-3UTR GCA 90 bp | AATGTCACCAATGGACACCATGATCTGAACCAAGTAGTTCATTTCAGTCTTTTAGAGCGGCAGTGTGAGTaGGAGAGCGCCTCCGGGTGT | + |
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Preference number: 4 (lower is better) Translates to: NVTNGHHDLNQVVHFSLLERQCE*ESASGC Trigger: ACACCCGGAGGCGCTCTCGCACTCACACTGCCGCTC...TAAAAGACTGAAATGAACTACTTGGTTCAGATCATGGTGTCCATTGGTGACATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000317995.5 |
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| CDS-3UTR CCA 90 bp | CTCAAAAGTTTCCTTTTCTTATCCAAGGGCATTATAGGACCATTGTCTTCCTCCCAACCCGGTCAGGAGTaGAGAGGCTGGTACCTGTGC | + |
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Preference number: 4 (lower is better) Translates to: LKSFLFLSKGIIGPLSSSQPGQE*RGWYLC Trigger: GCACAGGTACCAGCCTCTCCACTCCTGACCGGGTTG...GGAGGAAGACAATGGTCCTATAATGCCCTTGGATAAGAAAAGGAAACTTTTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000317995.5 |
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| CDS-3UTR TCA 90 bp | CTCAAAAGTTTCCTTTTCTTATCCAAGGGCATTATAGGACCATTGTCTTCCTCCGGTGCTGACCCCATGTaGTCCAGGGCTACCAACAGA | + |
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Preference number: 4 (lower is better) Translates to: LKSFLFLSKGIIGPLSSSGADPM*SRATNR Trigger: TCTGTTGGTAGCCCTGGATCACATGGGGTCAGCACC...GGAGGAAGACAATGGTCCTATAATGCCCTTGGATAAGAAAAGGAAACTTTTGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000317995.5 |
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| CDS-3UTR CCA 90 bp | TTAGCAAGCCTCAACTTTTCCACACATTGCCATAACCCTAGTCCTTTCTCTTGCACCTTCACTGCAAGGTaGGATGGTGAGAGAGCCTTC | + |
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Preference number: 4 (lower is better) Translates to: LASLNFSTHCHNPSPFSCTFTAR*DGERAF Trigger: GAAGGCTCTCTCACCATCCCACCTTGCAGTGAAGGT...GCAAGAGAAAGGACTAGGGTTATGGCAATGTGTGGAAAAGTTGAGGCTTGCTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000317995.5 |
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| CDS-3UTR TCA 90 bp | TTAGCAAGCCTCAACTTTTCCACACATTGCCATAACCCTAGTCCTTTCTCTTGCTCAAATTCATGCCCTTaGGGCAATGGTCCTCCCGAA | + |
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Preference number: 4 (lower is better) Translates to: LASLNFSTHCHNPSPFSCSNSCP*GNGPPE Trigger: TTCGGGAGGACCATTGCCTCAAGGGCATGAATTTGA...GCAAGAGAAAGGACTAGGGTTATGGCAATGTGTGGAAAAGTTGAGGCTTGCTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000317995.5 |
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| CDS-3UTR TCA 90 bp | CTCAAAAGTTTCCTTTTCTTATCCAAGGGCATTATAGGACCATTGTCTTCCTCCTGCAAGGTGGGATGGTaGGAGAGCCTTCATACACCC | + |
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Preference number: 4 (lower is better) Translates to: LKSFLFLSKGIIGPLSSSCKVGW*ESLHTP Trigger: GGGTGTATGAAGGCTCTCTCACCATCCCACCTTGCA...GGAGGAAGACAATGGTCCTATAATGCCCTTGGATAAGAAAAGGAAACTTTTGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000317995.5 |
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| CDS-3UTR GCA 90 bp | GTCTTCTATTTCTATGACTTAGATATTCTGCATCACAAAATCCCTCCAAACTGGGAGTGCAAGCAGGCGTaGGTTCGGACCGAGTGTTCC | + |
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Preference number: 4 (lower is better) Translates to: VFYFYDLDILHHKIPPNWECKQA*VRTECS Trigger: GGAACACTCGGTCCGAACGCACGCCTGCTTGCACTC...CCAGTTTGGAGGGATTTTGTGATGCAGAATATCTAAGTCATAGAAATAGAAGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000317995.5 |
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| CDS-3UTR GCA 90 bp | AATGTCACCAATGGACACCATGATCTGAACCAAGTAGTTCATTTCAGTCTTTTAGAACCGCAGTGTGAGTaGAAGCAGGCGTGCGTTCGG | + |
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Preference number: 4 (lower is better) Translates to: NVTNGHHDLNQVVHFSLLEPQCE*KQACVR Trigger: CCGAACGCACGCCTGCTTGCACTCACACTGCGGTTC...TAAAAGACTGAAATGAACTACTTGGTTCAGATCATGGTGTCCATTGGTGACATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000317995.5 |
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| CDS-3UTR TCA 90 bp | AATGTCACCAATGGACACCATGATCTGAACCAAGTAGTTCATTTCAGTCTTTTACGACGGTATCTTCGATaGAGCTCAGGTCCGCCATGG | + |
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Preference number: 4 (lower is better) Translates to: NVTNGHHDLNQVVHFSLLRRYLR*SSGPPW Trigger: CCATGGCGGACCTGAGCTTCATCGAAGATACCGTCG...TAAAAGACTGAAATGAACTACTTGGTTCAGATCATGGTGTCCATTGGTGACATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000317995.5 |
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| CDS-3UTR TCA 90 bp | TTAGCAAGCCTCAACTTTTCCACACATTGCCATAACCCTAGTCCTTTCTCTTGCTATGTCCATCATTGGTaGCTTCACAGTCTCGGCACA | + |
|
Preference number: 4 (lower is better) Translates to: LASLNFSTHCHNPSPFSCYVHHW*LHSLGT Trigger: TGTGCCGAGACTGTGAAGTCACCAATGATGGACATA...GCAAGAGAAAGGACTAGGGTTATGGCAATGTGTGGAAAAGTTGAGGCTTGCTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000317995.5 |
||
| CDS-3UTR TCA 90 bp | CTCAAAAGTTTCCTTTTCTTATCCAAGGGCATTATAGGACCATTGTCTTCCTCCGAACAAACAGAGCAATaGTGGCGATTCCGTGCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LKSFLFLSKGIIGPLSSSEQTEQ*WRFRAA Trigger: AGCCGCACGGAATCGCCATCATTGCTCTGTTTGTTC...GGAGGAAGACAATGGTCCTATAATGCCCTTGGATAAGAAAAGGAAACTTTTGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000317995.5 |
||
| CDS-3UTR GCA 90 bp | AATGTCACCAATGGACACCATGATCTGAACCAAGTAGTTCATTTCAGTCTTTTAATGATGGCGATTCCGTaGGGCTTCCCCACAGCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: NVTNGHHDLNQVVHFSLLMMAIP*GFPTAS Trigger: TGAGGCTGTGGGGAAGCCGCACGGAATCGCCATCAT...TAAAAGACTGAAATGAACTACTTGGTTCAGATCATGGTGTCCATTGGTGACATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000317995.5 |
||
| CDS-3UTR GCA 90 bp | GTCTTCTATTTCTATGACTTAGATATTCTGCATCACAAAATCCCTCCAAACTGGCGCTTTCAGAGGCACTaGCTGGTGCTGACCCCATGT | + |
|
Preference number: 4 (lower is better) Translates to: VFYFYDLDILHHKIPPNWRFQRH*LVLTPC Trigger: ACATGGGGTCAGCACCAGGCAGTGCCTCTGAAAGCG...CCAGTTTGGAGGGATTTTGTGATGCAGAATATCTAAGTCATAGAAATAGAAGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000317995.5 |
||
| CDS-3UTR TCA 90 bp | TTAGCAAGCCTCAACTTTTCCACACATTGCCATAACCCTAGTCCTTTCTCTTGCGTCCTCTTTGGCTACTaGAATGCAGCTCTAATGACT | + |
|
Preference number: 4 (lower is better) Translates to: LASLNFSTHCHNPSPFSCVLFGY*NAALMT Trigger: AGTCATTAGAGCTGCATTTCAGTAGCCAAAGAGGAC...GCAAGAGAAAGGACTAGGGTTATGGCAATGTGTGGAAAAGTTGAGGCTTGCTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000317995.5 |
||
| CDS-3UTR TCA 90 bp | TTAGCAAGCCTCAACTTTTCCACACATTGCCATAACCCTAGTCCTTTCTCTTGCTCCAGGAATGCCATATaGATGGCCTCTCATTTATGG | + |
|
Preference number: 4 (lower is better) Translates to: LASLNFSTHCHNPSPFSCSRNAI*MASHLW Trigger: CCATAAATGAGAGGCCATTCATATGGCATTCCTGGA...GCAAGAGAAAGGACTAGGGTTATGGCAATGTGTGGAAAAGTTGAGGCTTGCTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000317995.5 |
||
| CDS-3UTR GCA 90 bp | CTCAAAAGTTTCCTTTTCTTATCCAAGGGCATTATAGGACCATTGTCTTCCTCCGCCTTCCACAAGTTCTaGCCCCTTAACATGTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LKSFLFLSKGIIGPLSSSAFHKF*PLNMCP Trigger: AGGACACATGTTAAGGGGGCAGAACTTGTGGAAGGC...GGAGGAAGACAATGGTCCTATAATGCCCTTGGATAAGAAAAGGAAACTTTTGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000317995.5 |
||
| CDS-3UTR TCA 90 bp | CTCAAAAGTTTCCTTTTCTTATCCAAGGGCATTATAGGACCATTGTCTTCCTCCGGAATAATATCCAGGTaGCACCTTCACTGCAAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LKSFLFLSKGIIGPLSSSGIISR*HLHCKV Trigger: CACCTTGCAGTGAAGGTGTCACCTGGATATTATTCC...GGAGGAAGACAATGGTCCTATAATGCCCTTGGATAAGAAAAGGAAACTTTTGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000317995.5 |
||
| CDS-3UTR TCA 90 bp | CTCAAAAGTTTCCTTTTCTTATCCAAGGGCATTATAGGACCATTGTCTTCCTCCGTTGGAGACAGGAAATaGAGAACTACTAACACCGGG | + |
|
Preference number: 4 (lower is better) Translates to: LKSFLFLSKGIIGPLSSSVGDRK*RTTNTG Trigger: CCCGGTGTTAGTAGTTCTTCATTTCCTGTCTCCAAC...GGAGGAAGACAATGGTCCTATAATGCCCTTGGATAAGAAAAGGAAACTTTTGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000317995.5 |
||
| CDS-3UTR TCA 90 bp | TTAGCAAGCCTCAACTTTTCCACACATTGCCATAACCCTAGTCCTTTCTCTTGCGTGAAGGGTGAAGTCTaGACAACTAGATGTTATCCT | + |
|
Preference number: 4 (lower is better) Translates to: LASLNFSTHCHNPSPFSCVKGEV*TTRCYP Trigger: AGGATAACATCTAGTTGTTCAGACTTCACCCTTCAC...GCAAGAGAAAGGACTAGGGTTATGGCAATGTGTGGAAAAGTTGAGGCTTGCTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000317995.5 |
||
| CDS-3UTR GCA 90 bp | TTAGCAAGCCTCAACTTTTCCACACATTGCCATAACCCTAGTCCTTTCTCTTGCTTGAAATTAACCGTGTaGTCAGAACCACGCTGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: LASLNFSTHCHNPSPFSCLKLTV*SEPRWF Trigger: AAACCAGCGTGGTTCTGAGCACACGGTTAATTTCAA...GCAAGAGAAAGGACTAGGGTTATGGCAATGTGTGGAAAAGTTGAGGCTTGCTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000317995.5 |
||
| CDS-3UTR TCA 90 bp | TTAGCAAGCCTCAACTTTTCCACACATTGCCATAACCCTAGTCCTTTCTCTTGCTGTTCCTTTCCTATCTaGACAAACAGAGCAATGATG | + |
|
Preference number: 4 (lower is better) Translates to: LASLNFSTHCHNPSPFSCCSFPI*TNRAMM Trigger: CATCATTGCTCTGTTTGTTCAGATAGGAAAGGAACA...GCAAGAGAAAGGACTAGGGTTATGGCAATGTGTGGAAAAGTTGAGGCTTGCTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000317995.5 |
||
| CDS-3UTR TCA 90 bp | CTCAAAAGTTTCCTTTTCTTATCCAAGGGCATTATAGGACCATTGTCTTCCTCCCAAAGCTGGATTAGATaGAGACAAACAACGCAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LKSFLFLSKGIIGPLSSSQSWIR*RQTTQA Trigger: AGCCTGCGTTGTTTGTCTTCATCTAATCCAGCTTTG...GGAGGAAGACAATGGTCCTATAATGCCCTTGGATAAGAAAAGGAAACTTTTGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000317995.5 |
||
| CDS-3UTR TCA 90 bp | AATGTCACCAATGGACACCATGATCTGAACCAAGTAGTTCATTTCAGTCTTTTATTCAAGAACAATCCCTaGCTGTTCAGCACCAACCCG | + |
|
Preference number: 4 (lower is better) Translates to: NVTNGHHDLNQVVHFSLLFKNNP*LFSTNP Trigger: CGGGTTGGTGCTGAACAGTCAGGGATTGTTCTTGAA...TAAAAGACTGAAATGAACTACTTGGTTCAGATCATGGTGTCCATTGGTGACATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000317995.5 |
||
| CDS-3UTR GCA 90 bp | AATGTCACCAATGGACACCATGATCTGAACCAAGTAGTTCATTTCAGTCTTTTACAGCCTCATCAATGCTaGCAAACAGAGTGGAGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: NVTNGHHDLNQVVHFSLLQPHQC*QTEWSS Trigger: GGAACTCCACTCTGTTTGGCAGCATTGATGAGGCTG...TAAAAGACTGAAATGAACTACTTGGTTCAGATCATGGTGTCCATTGGTGACATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000317995.5 |
||
| CDS-3UTR GCA 90 bp | AATGTCACCAATGGACACCATGATCTGAACCAAGTAGTTCATTTCAGTCTTTTACCACAGCCTCATCAATaGTGCCAAACAGAGTGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: NVTNGHHDLNQVVHFSLLPQPHQ*CQTEWS Trigger: ACTCCACTCTGTTTGGCAGCATTGATGAGGCTGTGG...TAAAAGACTGAAATGAACTACTTGGTTCAGATCATGGTGTCCATTGGTGACATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000317995.5 |
||
| CDS-3UTR CCA 90 bp | TTAGCAAGCCTCAACTTTTCCACACATTGCCATAACCCTAGTCCTTTCTCTTGCAGGTTAATAGGAGACTaGTATTCCCCATTAGCATCA | + |
|
Preference number: 4 (lower is better) Translates to: LASLNFSTHCHNPSPFSCRLIGD*YSPLAS Trigger: TGATGCTAATGGGGAATACCAGTCTCCTATTAACCT...GCAAGAGAAAGGACTAGGGTTATGGCAATGTGTGGAAAAGTTGAGGCTTGCTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000317995.5 |
||
| CDS-3UTR CCA 90 bp | AATGTCACCAATGGACACCATGATCTGAACCAAGTAGTTCATTTCAGTCTTTTAGCACACCACATAATTTaGGGAGAGGCGGACATCCAA | + |
|
Preference number: 4 (lower is better) Translates to: NVTNGHHDLNQVVHFSLLAHHII*GEADIQ Trigger: TTGGATGTCCGCCTCTCCCCAAATTATGTGGTGTGC...TAAAAGACTGAAATGAACTACTTGGTTCAGATCATGGTGTCCATTGGTGACATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000317995.5 |
||
| CDS-3UTR CCA 90 bp | GTCTTCTATTTCTATGACTTAGATATTCTGCATCACAAAATCCCTCCAAACTGGAGAGTGGAGTTCCAGTaGATCAGATGGAGCTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: VFYFYDLDILHHKIPPNWRVEFQ*IRWSSM Trigger: CATGGAGCTCCATCTGATCCACTGGAACTCCACTCT...CCAGTTTGGAGGGATTTTGTGATGCAGAATATCTAAGTCATAGAAATAGAAGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000317995.5 |
||
| CDS-3UTR CCA 90 bp | CTCAAAAGTTTCCTTTTCTTATCCAAGGGCATTATAGGACCATTGTCTTCCTCCTGTTCCTGTCCTCTTTaGCTACTGAAATGCAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LKSFLFLSKGIIGPLSSSCSCPL*LLKCSS Trigger: AGAGCTGCATTTCAGTAGCCAAAGAGGACAGGAACA...GGAGGAAGACAATGGTCCTATAATGCCCTTGGATAAGAAAAGGAAACTTTTGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000317995.5 |
||
| CDS-3UTR TCA 90 bp | CTCAAAAGTTTCCTTTTCTTATCCAAGGGCATTATAGGACCATTGTCTTCCTCCGCTTTGAGGATAAACTaGAGGTGCAGCTCAAAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: LKSFLFLSKGIIGPLSSSALRIN*RCSSKV Trigger: AACTTTTGAGCTGCACCTTCAGTTTATCCTCAAAGC...GGAGGAAGACAATGGTCCTATAATGCCCTTGGATAAGAAAAGGAAACTTTTGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000317995.5 |
||
| CDS-3UTR TCA 90 bp | CTCAAAAGTTTCCTTTTCTTATCCAAGGGCATTATAGGACCATTGTCTTCCTCCCAGTATGTGCAACTATaGATCCTAGCAGCAGTAATG | + |
|
Preference number: 4 (lower is better) Translates to: LKSFLFLSKGIIGPLSSSQYVQL*ILAAVM Trigger: CATTACTGCTGCTAGGATTCATAGTTGCACATACTG...GGAGGAAGACAATGGTCCTATAATGCCCTTGGATAAGAAAAGGAAACTTTTGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000317995.5 |
||
| CDS-3UTR GCA 90 bp | TTAGCAAGCCTCAACTTTTCCACACATTGCCATAACCCTAGTCCTTTCTCTTGCTTATTGTTTGCTTTGTaGCAGGTACTCTACTGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: LASLNFSTHCHNPSPFSCLLFAL*QVLYCF Trigger: AAAGCAGTAGAGTACCTGGCACAAAGCAAACAATAA...GCAAGAGAAAGGACTAGGGTTATGGCAATGTGTGGAAAAGTTGAGGCTTGCTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000317995.5 |
||
| CDS-3UTR GCA 90 bp | AATGTCACCAATGGACACCATGATCTGAACCAAGTAGTTCATTTCAGTCTTTTAATAAGGCTGCACGTGTaGAGCCAATGTTTGGCATGT | + |
|
Preference number: 4 (lower is better) Translates to: NVTNGHHDLNQVVHFSLLIRLHV*SQCLAC Trigger: ACATGCCAAACATTGGCTGCACACGTGCAGCCTTAT...TAAAAGACTGAAATGAACTACTTGGTTCAGATCATGGTGTCCATTGGTGACATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000317995.5 |
||
| CDS-3UTR GCA 90 bp | CTCAAAAGTTTCCTTTTCTTATCCAAGGGCATTATAGGACCATTGTCTTCCTCCGTTTTGTTCCAGGAATaGCATATGAATGGCCTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: LKSFLFLSKGIIGPLSSSVLFQE*HMNGLS Trigger: TGAGAGGCCATTCATATGGCATTCCTGGAACAAAAC...GGAGGAAGACAATGGTCCTATAATGCCCTTGGATAAGAAAAGGAAACTTTTGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000317995.5 |
||
| CDS-3UTR GCA 90 bp | GTCTTCTATTTCTATGACTTAGATATTCTGCATCACAAAATCCCTCCAAACTGGTCTTTGGGAGATTCCTaGCCCAATTACAGGGTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: VFYFYDLDILHHKIPPNWSLGDS*PNYRVH Trigger: ATGGACCCTGTAATTGGGGCAGGAATCTCCCAAAGA...CCAGTTTGGAGGGATTTTGTGATGCAGAATATCTAAGTCATAGAAATAGAAGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000317995.5 |
||
| CDS-3UTR CCA 90 bp | AATGTCACCAATGGACACCATGATCTGAACCAAGTAGTTCATTTCAGTCTTTTATTCCAGTGGATCAGATaGAGCTCCATGGGAAAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: NVTNGHHDLNQVVHFSLLFQWIR*SSMGKA Trigger: AGCTTTTCCCATGGAGCTCCATCTGATCCACTGGAA...TAAAAGACTGAAATGAACTACTTGGTTCAGATCATGGTGTCCATTGGTGACATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000317995.5 |
||
| CDS-3UTR CCA 90 bp | AATGTCACCAATGGACACCATGATCTGAACCAAGTAGTTCATTTCAGTCTTTTATGCTGCCAAACAGAGTaGAGTTCCAGTGGATCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: NVTNGHHDLNQVVHFSLLCCQTE*SSSGSD Trigger: ATCTGATCCACTGGAACTCCACTCTGTTTGGCAGCA...TAAAAGACTGAAATGAACTACTTGGTTCAGATCATGGTGTCCATTGGTGACATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000317995.5 |
||
| CDS-3UTR CCA 90 bp | CTCAAAAGTTTCCTTTTCTTATCCAAGGGCATTATAGGACCATTGTCTTCCTCCATGGCCTCTCATTTATaGAAGGCTTCAGATCTAGTC | + |
|
Preference number: 4 (lower is better) Translates to: LKSFLFLSKGIIGPLSSSMASHL*KASDLV Trigger: GACTAGATCTGAAGCCTTCCATAAATGAGAGGCCAT...GGAGGAAGACAATGGTCCTATAATGCCCTTGGATAAGAAAAGGAAACTTTTGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000317995.5 |
||
| CDS-3UTR TCA 90 bp | GTCTTCTATTTCTATGACTTAGATATTCTGCATCACAAAATCCCTCCAAACTGGCCAATGTTTGGCATGTaGGTGGTAACAGTGCTAGAT | + |
|
Preference number: 4 (lower is better) Translates to: VFYFYDLDILHHKIPPNWPMFGM*VVTVLD Trigger: ATCTAGCACTGTTACCACTCACATGCCAAACATTGG...CCAGTTTGGAGGGATTTTGTGATGCAGAATATCTAAGTCATAGAAATAGAAGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000317995.5 |
||
| CDS-3UTR TCA 90 bp | AATGTCACCAATGGACACCATGATCTGAACCAAGTAGTTCATTTCAGTCTTTTAATACACACACACCTGTaGAGGGTGAAGTCTGAACAA | + |
|
Preference number: 4 (lower is better) Translates to: NVTNGHHDLNQVVHFSLLIHTHL*RVKSEQ Trigger: TTGTTCAGACTTCACCCTTCACAGGTGTGTGTGTAT...TAAAAGACTGAAATGAACTACTTGGTTCAGATCATGGTGTCCATTGGTGACATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000317995.5 |
||
| CDS-3UTR TCA 90 bp | GTCTTCTATTTCTATGACTTAGATATTCTGCATCACAAAATCCCTCCAAACTGGCACCAATGGACACCATaGTCTGAACCAAGTAGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: VFYFYDLDILHHKIPPNWHQWTP*SEPSSS Trigger: TGAACTACTTGGTTCAGATCATGGTGTCCATTGGTG...CCAGTTTGGAGGGATTTTGTGATGCAGAATATCTAAGTCATAGAAATAGAAGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000317995.5 |
||
| CDS-3UTR GCA 90 bp | CTCAAAAGTTTCCTTTTCTTATCCAAGGGCATTATAGGACCATTGTCTTCCTCCAACTTTTCCACACATTaGCATAACCCTAGTCCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: LKSFLFLSKGIIGPLSSSNFSTH*HNPSPF Trigger: GAAAGGACTAGGGTTATGGCAATGTGTGGAAAAGTT...GGAGGAAGACAATGGTCCTATAATGCCCTTGGATAAGAAAAGGAAACTTTTGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000317995.5 |
||
| CDS-3UTR GCA 90 bp | TTAGCAAGCCTCAACTTTTCCACACATTGCCATAACCCTAGTCCTTTCTCTTGCAAGATGAAAGAAGATTaGAAGAAGCATCAGAAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LASLNFSTHCHNPSPFSCKMKED*KKHQKS Trigger: AGACTTCTGATGCTTCTTGCAATCTTCTTTCATCTT...GCAAGAGAAAGGACTAGGGTTATGGCAATGTGTGGAAAAGTTGAGGCTTGCTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000317995.5 |
||
| CDS-3UTR TCA 90 bp | GTCTTCTATTTCTATGACTTAGATATTCTGCATCACAAAATCCCTCCAAACTGGGACTTCAGGATAACCTaGATGGTATGTCCATCATTG | + |
|
Preference number: 4 (lower is better) Translates to: VFYFYDLDILHHKIPPNWDFRIT*MVCPSL Trigger: CAATGATGGACATACCATTCAGGTTATCCTGAAGTC...CCAGTTTGGAGGGATTTTGTGATGCAGAATATCTAAGTCATAGAAATAGAAGAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000317995.5 |
||
| CDS-3UTR TCA 90 bp | GTCTTCTATTTCTATGACTTAGATATTCTGCATCACAAAATCCCTCCAAACTGGCCTGGTACATGGTGCTaGCCTTCTTTTTATCCTATT | + |
|
Preference number: 4 (lower is better) Translates to: VFYFYDLDILHHKIPPNWPGTWC*PSFYPI Trigger: AATAGGATAAAAAGAAGGTCAGCACCATGTACCAGG...CCAGTTTGGAGGGATTTTGTGATGCAGAATATCTAAGTCATAGAAATAGAAGAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000317995.5 |
||
| CDS-3UTR TCA 90 bp | CTCAAAAGTTTCCTTTTCTTATCCAAGGGCATTATAGGACCATTGTCTTCCTCCAATCACACCAGATGGTaGCTCAAATTTACAAGACAA | + |
|
Preference number: 4 (lower is better) Translates to: LKSFLFLSKGIIGPLSSSNHTRW*LKFTRQ Trigger: TTGTCTTGTAAATTTGAGTCACCATCTGGTGTGATT...GGAGGAAGACAATGGTCCTATAATGCCCTTGGATAAGAAAAGGAAACTTTTGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000317995.5 |
||
| CDS-3UTR GCA 90 bp | GTCTTCTATTTCTATGACTTAGATATTCTGCATCACAAAATCCCTCCAAACTGGCCTAGTCCTTTCTCTTaGTGCCCAAGAATACATGAT | + |
|
Preference number: 4 (lower is better) Translates to: VFYFYDLDILHHKIPPNWPSPFS*CPRIHD Trigger: ATCATGTATTCTTGGGCAGCAAGAGAAAGGACTAGG...CCAGTTTGGAGGGATTTTGTGATGCAGAATATCTAAGTCATAGAAATAGAAGAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000317995.5 |
||
| CDS-3UTR CCA 90 bp | AATGTCACCAATGGACACCATGATCTGAACCAAGTAGTTCATTTCAGTCTTTTAGGAATGCCATATGAATaGCCTCTCATTTATGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: NVTNGHHDLNQVVHFSLLGMPYE*PLIYGR Trigger: CCTTCCATAAATGAGAGGCCATTCATATGGCATTCC...TAAAAGACTGAAATGAACTACTTGGTTCAGATCATGGTGTCCATTGGTGACATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000317995.5 |
||
| CDS-3UTR TCA 90 bp | AATGTCACCAATGGACACCATGATCTGAACCAAGTAGTTCATTTCAGTCTTTTAGACTTCCCCTTATACTaGATATCTTGGAGGATTTCA | + |
|
Preference number: 4 (lower is better) Translates to: NVTNGHHDLNQVVHFSLLDFPLY*ISWRIS Trigger: TGAAATCCTCCAAGATATTCAGTATAAGGGGAAGTC...TAAAAGACTGAAATGAACTACTTGGTTCAGATCATGGTGTCCATTGGTGACATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000317995.5 |
||
| CDS-3UTR GCA 90 bp | AATGTCACCAATGGACACCATGATCTGAACCAAGTAGTTCATTTCAGTCTTTTAAACAAGTATATGATATaGCCTTTAGCAACCACTGTG | + |
|
Preference number: 4 (lower is better) Translates to: NVTNGHHDLNQVVHFSLLNKYMI*PLATTV Trigger: CACAGTGGTTGCTAAAGGGCATATCATATACTTGTT...TAAAAGACTGAAATGAACTACTTGGTTCAGATCATGGTGTCCATTGGTGACATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000317995.5 |
||
| CDS-3UTR CCA 90 bp | GTCTTCTATTTCTATGACTTAGATATTCTGCATCACAAAATCCCTCCAAACTGGAGCAAGGTATTGTTTTaGACTTCCCCTTATACTGAA | + |
|
Preference number: 4 (lower is better) Translates to: VFYFYDLDILHHKIPPNWSKVLF*TSPYTE Trigger: TTCAGTATAAGGGGAAGTCCAAAACAATACCTTGCT...CCAGTTTGGAGGGATTTTGTGATGCAGAATATCTAAGTCATAGAAATAGAAGAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000317995.5 |
||
| CDS-3UTR GCA 90 bp | AATGTCACCAATGGACACCATGATCTGAACCAAGTAGTTCATTTCAGTCTTTTAACACATGGATTATTCTaGAGGATAAACCATATGCTA | + |
|
Preference number: 4 (lower is better) Translates to: NVTNGHHDLNQVVHFSLLTHGLF*RINHML Trigger: TAGCATATGGTTTATCCTGCAGAATAATCCATGTGT...TAAAAGACTGAAATGAACTACTTGGTTCAGATCATGGTGTCCATTGGTGACATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000317995.5 |
||
| CDS-3UTR CCA 90 bp | GTCTTCTATTTCTATGACTTAGATATTCTGCATCACAAAATCCCTCCAAACTGGTCTTCTATCTGTAGCTaGGATATAGTTAAAGGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: VFYFYDLDILHHKIPPNWSSICS*DIVKGY Trigger: ATACCCTTTAACTATATCCCAGCTACAGATAGAAGA...CCAGTTTGGAGGGATTTTGTGATGCAGAATATCTAAGTCATAGAAATAGAAGAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000317995.5 |
||
| CDS-3UTR CCA 90 bp | GTCTTCTATTTCTATGACTTAGATATTCTGCATCACAAAATCCCTCCAAACTGGGATCCAACTATAAGTTaGAGACACACTTTAGATTCA | + |
|
Preference number: 4 (lower is better) Translates to: VFYFYDLDILHHKIPPNWDPTIS*RHTLDS Trigger: TGAATCTAAAGTGTGTCTCCAACTTATAGTTGGATC...CCAGTTTGGAGGGATTTTGTGATGCAGAATATCTAAGTCATAGAAATAGAAGAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000317995.5 |
||
| CDS GCA 90 bp | GAGAGCGCCTCCGGGTGTGAACCGCAGTGTGAGTGCAAGCAGGCGTaGGTTCGGACCGAGTGTTCCAGAGACCCGCGTGGGAAGCGCGTC | + |
|
Preference number: 5 (lower is better) Translates to: ESASGCEPQCECKQA*VRTECSRDPRGKRV Trigger: GACGCGCTTCCCACGCGGGTCTCTGGAACACTCGGTCCGAACGCACGCCTGCTTGCACTCACACTGCGGTTCACACCCGGAGGCGCTCTC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000317995.5 ENST00000524872.5 |
||
| CDS GCA 90 bp | CAGTGTGAGTGCGAGAGCGCCTCCGGGTGTGAACCGCAGTGTGAGTaGAAGCAGGCGTGCGTTCGGACCGAGTGTTCCAGAGACCCGCGT | + |
|
Preference number: 5 (lower is better) Translates to: QCECESASGCEPQCE*KQACVRTECSRDPR Trigger: ACGCGGGTCTCTGGAACACTCGGTCCGAACGCACGCCTGCTTGCACTCACACTGCGGTTCACACCCGGAGGCGCTCTCGCACTCACACTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000317995.5 ENST00000524872.5 |
||
| CDS GCA 90 bp | CATGCCAGATATGCTCCCTCCCCTGAGAAACAAGAGGATCAATTCTaGAGGAGACGAGAAGGGTCCACACTGAGGCTCACACGCTCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: HARYAPSPEKQEDQF*RRREGSTLRLTRSP Trigger: TGGGGAGCGTGTGAGCCTCAGTGTGGACCCTTCTCGTCTCCTGCAGAATTGATCCTCTTGTTTCTCAGGGGAGGGAGCATATCTGGCATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000524872.5 |
||
| CDS CCA 90 bp | ACAGGCAGCAAGAAAGACGCTGTGGAGACTAAATGGTACAACCCATaGGGCCAGCGCCATGGCAGTGCCCTATCAAGCATACAGGGAGCA | + |
|
Preference number: 5 (lower is better) Translates to: TGSKKDAVETKWYNP*GQRHGSALSSIQGA Trigger: TGCTCCCTGTATGCTTGATAGGGCACTGCCATGGCGCTGGCCCCATGGGTTGTACCATTTAGTCTCCACAGCGTCTTTCTTGCTGCCTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000529918.1 |
||
| CDS TCA 90 bp | AGAAACAAGAGGATCAATTCTGCAGGAGACGAGAAGGGTCCACACTaGGGCTCACACGCTCCCCAAGTCCCCTCCTATGTGCTCCTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: RNKRINSAGDEKGPH*GSHAPQVPSYVLLG Trigger: ACCAAGGAGCACATAGGAGGGGACTTGGGGAGCGTGTGAGCCTCAGTGTGGACCCTTCTCGTCTCCTGCAGAATTGATCCTCTTGTTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000524872.5 |
||
| CDS CCA 90 bp | ATGTCCATCATTGGTGACTTCACAGTCTCGGCACACCACATAATTTaGGGAGAGGCGGACATCCAACAGCGAGGGGTCATACCTAGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: MSIIGDFTVSAHHII*GEADIQQRGVIPSL Trigger: GAGGCTAGGTATGACCCCTCGCTGTTGGATGTCCGCCTCTCCCCAAATTATGTGGTGTGCCGAGACTGTGAAGTCACCAATGATGGACAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000317995.5 ENST00000524872.5 ENST00000529918.1 |
||
| CDS TCA 90 bp | ATCAAGACGTGGACTGAATCCAACATCCCCTCACTTTCACCAGTGTaGACTGTCTATCTCCACTGTGCCTGGCAGTGGGCAAATGATGGG | + |
|
Preference number: 5 (lower is better) Translates to: IKTWTESNIPSLSPV*TVYLHCAWQWANDG Trigger: CCCATCATTTGCCCACTGCCAGGCACAGTGGAGATAGACAGTTCACACTGGTGAAAGTGAGGGGATGTTGGATTCAGTCCACGTCTTGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000529918.1 |
||
| CDS GCA 90 bp | CCGAAAGTTGTCTCCCAAAATCCCATCACAGCCTTCCACAAGTTCTaGCCCCTTAACATGTGTCCTCAGCCTTCGAAATTCTTCTATCTG | + |
|
Preference number: 5 (lower is better) Translates to: PKVVSQNPITAFHKF*PLNMCPQPSKFFYL Trigger: CAGATAGAAGAATTTCGAAGGCTGAGGACACATGTTAAGGGGGCAGAACTTGTGGAAGGCTGTGATGGGATTTTGGGAGACAACTTTCGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000317995.5 ENST00000524872.5 |
||
| CDS-3UTR CAA 90 bp | TTAGCAAGCCTCAACTTTTCCACACATTGCCATAACCCTAGTCCTTTCTCTTGCTTCAAATTCATGCCCTaGAGGCAATGGTCCTCCCGA | + |
|
Preference number: 5 (lower is better) Translates to: LASLNFSTHCHNPSPFSCFKFMP*RQWSSR Trigger: TCGGGAGGACCATTGCCTCAAGGGCATGAATTTGAA...GCAAGAGAAAGGACTAGGGTTATGGCAATGTGTGGAAAAGTTGAGGCTTGCTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000317995.5 |
||
| CDS GCA 90 bp | GCTGCTTCACGGGGACAACATGGTAAGTTACTAAAGAGGTATGCATaGATGTCACTTTTTCTGGGCCTGAGGGTGTCTGTTCTTATGAAA | + |
|
Preference number: 5 (lower is better) Translates to: AASRGQHGKLLKRYA*MSLFLGLRVSVLMK Trigger: TTTCATAAGAACAGACACCCTCAGGCCCAGAAAAAGTGACATGCATGCATACCTCTTTAGTAACTTACCATGTTGTCCCCGTGAAGCAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000524872.5 |
||
| CDS-3UTR CAA 90 bp | TTAGCAAGCCTCAACTTTTCCACACATTGCCATAACCCTAGTCCTTTCTCTTGCATGGTATGTCCATCATaGGTGACTTCACAGTCTCGG | + |
|
Preference number: 5 (lower is better) Translates to: LASLNFSTHCHNPSPFSCMVCPS*VTSQSR Trigger: CCGAGACTGTGAAGTCACCAATGATGGACATACCAT...GCAAGAGAAAGGACTAGGGTTATGGCAATGTGTGGAAAAGTTGAGGCTTGCTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000317995.5 |
||
| CDS-3UTR CAA 90 bp | TTAGCAAGCCTCAACTTTTCCACACATTGCCATAACCCTAGTCCTTTCTCTTGCTTGTTCCTGTCCTCTTaGGCTACTGAAATGCAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: LASLNFSTHCHNPSPFSCLFLSS*ATEMQL Trigger: GAGCTGCATTTCAGTAGCCAAAGAGGACAGGAACAA...GCAAGAGAAAGGACTAGGGTTATGGCAATGTGTGGAAAAGTTGAGGCTTGCTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000317995.5 |
||
| CDS CCA 90 bp | ACGCTAGGTTTAAGTAGCTGTGCACCTCATTTTCCTTACTTAATCTaGACATACCCTCATGAAGACAGACTTGTTCCTGTCCTCTTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: TLGLSSCAPHFPYLI*TYPHEDRLVPVLFG Trigger: GCCAAAGAGGACAGGAACAAGTCTGTCTTCATGAGGGTATGTCCAGATTAAGTAAGGAAAATGAGGTGCACAGCTACTTAAACCTAGCGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000524872.5 |
||
| CDS-3UTR CAA 90 bp | TTAGCAAGCCTCAACTTTTCCACACATTGCCATAACCCTAGTCCTTTCTCTTGCTACCTGTGCAGTGTTTaGTTCCAGGAATGCCATATG | + |
|
Preference number: 5 (lower is better) Translates to: LASLNFSTHCHNPSPFSCYLCSV*FQECHM Trigger: CATATGGCATTCCTGGAACAAAACACTGCACAGGTA...GCAAGAGAAAGGACTAGGGTTATGGCAATGTGTGGAAAAGTTGAGGCTTGCTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000317995.5 |
||
| CDS GCA 90 bp | TCCTTCCTTCTTATTTCTGAACAGAAGCAGTGCTTAGTGGATCACTaGCTCTTAAGTCCAGTTTTAGTCCTGATGAGGAGGAAGACAACT | + |
|
Preference number: 5 (lower is better) Translates to: SFLLISEQKQCLVDH*LLSPVLVLMRRKTT Trigger: AGTTGTCTTCCTCCTCATCAGGACTAAAACTGGACTTAAGAGGCAGTGATCCACTAAGCACTGCTTCTGTTCAGAAATAAGAAGGAAGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000528666.1 |
||
| CDS-3UTR CAA 90 bp | TTAGCAAGCCTCAACTTTTCCACACATTGCCATAACCCTAGTCCTTTCTCTTGCTCCATGGGAAAAGCTTaGAAATTAACCGTGTGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: LASLNFSTHCHNPSPFSCSMGKA*KLTVCS Trigger: TGAGCACACGGTTAATTTCAAAGCTTTTCCCATGGA...GCAAGAGAAAGGACTAGGGTTATGGCAATGTGTGGAAAAGTTGAGGCTTGCTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000317995.5 |
||
| CDS-3UTR CAA 90 bp | TTAGCAAGCCTCAACTTTTCCACACATTGCCATAACCCTAGTCCTTTCTCTTGCTATTTATTGTTTGCTTaGTGCCAGGTACTCTACTGC | + |
|
Preference number: 5 (lower is better) Translates to: LASLNFSTHCHNPSPFSCYLLFA*CQVLYC Trigger: GCAGTAGAGTACCTGGCACAAAGCAAACAATAAATA...GCAAGAGAAAGGACTAGGGTTATGGCAATGTGTGGAAAAGTTGAGGCTTGCTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000317995.5 |
||
| CDS GCA 90 bp | GTTCTCTGTATGAATTCCTTCCTTCTTATTTCTGAACAGAAGCAGTaGTTAGTGGATCACTGCCTCTTAAGTCCAGTTTTAGTCCTGATG | + |
|
Preference number: 5 (lower is better) Translates to: VLCMNSFLLISEQKQ*LVDHCLLSPVLVLM Trigger: CATCAGGACTAAAACTGGACTTAAGAGGCAGTGATCCACTAAGCACTGCTTCTGTTCAGAAATAAGAAGGAAGGAATTCATACAGAGAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000528666.1 |
||
| CDS-3UTR CAA 90 bp | AATGTCACCAATGGACACCATGATCTGAACCAAGTAGTTCATTTCAGTCTTTTACTCATGAAGACAGACTaGTTCCTGTCCTCTTTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: NVTNGHHDLNQVVHFSLLLMKTD*FLSSLA Trigger: AGCCAAAGAGGACAGGAACAAGTCTGTCTTCATGAG...TAAAAGACTGAAATGAACTACTTGGTTCAGATCATGGTGTCCATTGGTGACATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000317995.5 |
||
| CDS-3UTR CAA 90 bp | AATGTCACCAATGGACACCATGATCTGAACCAAGTAGTTCATTTCAGTCTTTTAGGCATTATAGGACCATaGTCTTCCTCCCTCATGAAG | + |
|
Preference number: 5 (lower is better) Translates to: NVTNGHHDLNQVVHFSLLGIIGP*SSSLMK Trigger: CTTCATGAGGGAGGAAGACAATGGTCCTATAATGCC...TAAAAGACTGAAATGAACTACTTGGTTCAGATCATGGTGTCCATTGGTGACATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000317995.5 |
||
| CDS-3UTR CAA 90 bp | TTAGCAAGCCTCAACTTTTCCACACATTGCCATAACCCTAGTCCTTTCTCTTGCAGATCCAACTATAAGTaGGAGACACACTTTAGATTC | + |
|
Preference number: 5 (lower is better) Translates to: LASLNFSTHCHNPSPFSCRSNYK*ETHFRF Trigger: GAATCTAAAGTGTGTCTCCAACTTATAGTTGGATCT...GCAAGAGAAAGGACTAGGGTTATGGCAATGTGTGGAAAAGTTGAGGCTTGCTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000317995.5 |
||
| CDS CCA 90 bp | TGGATCAGATGGAGCACAAGAGGATCACAAGTAGACACAAACTACTaGCTTAATACGAGTTCTCTGTATGAATTCCTTCCTTCTTATTTC | + |
|
Preference number: 5 (lower is better) Translates to: WIRWSTRGSQVDTNY*LNTSSLYEFLPSYF Trigger: GAAATAAGAAGGAAGGAATTCATACAGAGAACTCGTATTAAGCCAGTAGTTTGTGTCTACTTGTGATCCTCTTGTGCTCCATCTGATCCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000528666.1 |
||
| CDS-3UTR CAA 90 bp | CTCAAAAGTTTCCTTTTCTTATCCAAGGGCATTATAGGACCATTGTCTTCCTCCCATTCACTTTGCATTTaGAAGCTCTATGCTGTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: LKSFLFLSKGIIGPLSSSHSLCI*KLYAVL Trigger: AAGAACAGCATAGAGCTTCAAAATGCAAAGTGAATG...GGAGGAAGACAATGGTCCTATAATGCCCTTGGATAAGAAAAGGAAACTTTTGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000317995.5 |
||
| CDS-3UTR CAA 90 bp | AATGTCACCAATGGACACCATGATCTGAACCAAGTAGTTCATTTCAGTCTTTTAACCGTTTCCTCATTGTaGGACACTAGGAACTGTTAT | + |
|
Preference number: 5 (lower is better) Translates to: NVTNGHHDLNQVVHFSLLTVSSL*DTRNCY Trigger: ATAACAGTTCCTAGTGTCCAACAATGAGGAAACGGT...TAAAAGACTGAAATGAACTACTTGGTTCAGATCATGGTGTCCATTGGTGACATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000317995.5 |
||
| CDS GCA 90 bp | TCAATTTATCATATAAAAGGCACTTCCATAGAAGAAGTATTTCAATaGATGCCAGATATGCTCCCTCCCCTGAGAAACAAGAGGATCAAT | + |
|
Preference number: 5 (lower is better) Translates to: SIYHIKGTSIEEVFQ*MPDMLPPLRNKRIN Trigger: ATTGATCCTCTTGTTTCTCAGGGGAGGGAGCATATCTGGCATGCATTGAAATACTTCTTCTATGGAAGTGCCTTTTATATGATAAATTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000524872.5 |
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| CDS-3UTR CAA 90 bp | AATGTCACCAATGGACACCATGATCTGAACCAAGTAGTTCATTTCAGTCTTTTACTTATACTGAATATCTaGGAGGATTTCAGTCACAGC | + |
|
Preference number: 5 (lower is better) Translates to: NVTNGHHDLNQVVHFSLLLILNI*EDFSHS Trigger: GCTGTGACTGAAATCCTCCAAGATATTCAGTATAAG...TAAAAGACTGAAATGAACTACTTGGTTCAGATCATGGTGTCCATTGGTGACATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000317995.5 |
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| CDS-3UTR CAA 90 bp | AATGTCACCAATGGACACCATGATCTGAACCAAGTAGTTCATTTCAGTCTTTTAGCATACCAAAACTTATaGGATGCAGCTAAAGCAATG | + |
|
Preference number: 5 (lower is better) Translates to: NVTNGHHDLNQVVHFSLLAYQNL*DAAKAM Trigger: CATTGCTTTAGCTGCATCCAATAAGTTTTGGTATGC...TAAAAGACTGAAATGAACTACTTGGTTCAGATCATGGTGTCCATTGGTGACATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000317995.5 |
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| CDS-3UTR CAA 90 bp | AATGTCACCAATGGACACCATGATCTGAACCAAGTAGTTCATTTCAGTCTTTTAAAGGAAATAGAAGACTaGAACAACACAACAGGCCAA | + |
|
Preference number: 5 (lower is better) Translates to: NVTNGHHDLNQVVHFSLLKEIED*NNTTGQ Trigger: TTGGCCTGTTGTGTTGTTCAAGTCTTCTATTTCCTT...TAAAAGACTGAAATGAACTACTTGGTTCAGATCATGGTGTCCATTGGTGACATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000317995.5 |
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| CDS-3UTR CAA 90 bp | GTCTTCTATTTCTATGACTTAGATATTCTGCATCACAAAATCCCTCCAAACTGGATGAACTTTCTTTGCTaGAATTTCAGGGATATCTGG | + |
|
Preference number: 5 (lower is better) Translates to: VFYFYDLDILHHKIPPNWMNFLC*NFRDIW Trigger: CCAGATATCCCTGAAATTCAAGCAAAGAAAGTTCAT...CCAGTTTGGAGGGATTTTGTGATGCAGAATATCTAAGTCATAGAAATAGAAGAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000317995.5 |
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| CDS CCA 72 bp | CCTCGGCGCTCTCGGCAGCAGTGCCTGCGCCTTCGCTaGGCGCGGGGCTGGAGCCGGAGCGGAGCGCGCGTG | + |
|
Preference number: 6 (lower is better) Translates to: PRRSRQQCLRLR*ARGWSRSGARV Trigger: CACGCGCGCTCCGCTCCGGCTCCAGCCCCGCGCCCAGCGAAGGCGCAGGCACTGCTGCCGAGAGCGCCGAGG 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000317995.5 ENST00000524872.5 ENST00000529918.1 |
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| CDS CCA 72 bp | CGGCAGCAGTGCCTGCGCCTTCGCTGGGCGCGGGGCTaGAGCCGGAGCGGAGCGCGCGTGGGGGAGTGTGAG | + |
|
Preference number: 6 (lower is better) Translates to: RQQCLRLRWARG*SRSGARVGECE Trigger: CTCACACTCCCCCACGCGCGCTCCGCTCCGGCTCCAGCCCCGCGCCCAGCGAAGGCGCAGGCACTGCTGCCG 78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000317995.5 ENST00000524872.5 ENST00000529918.1 |
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| CDS CCA 72 bp | GGCGTGCGTTCGGACCGAGTGTTCCAGAGACCCGCGTaGGAAGCGCGTCCGGAGGCCCCAGCAGAGCGAGGG | + |
|
Preference number: 6 (lower is better) Translates to: GVRSDRVFQRPA*EARPEAPAERG Trigger: CCCTCGCTCTGCTGGGGCCTCCGGACGCGCTTCCCACGCGGGTCTCTGGAACACTCGGTCCGAACGCACGCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000317995.5 |
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| CDS GCA 72 bp | TGGGGGAGTGTGAGCACGCGTGAGCGGCAGTGTGAGTaGGAGAGCGCCTCCGGGTGTGAACCGCAGTGTGAG | + |
|
Preference number: 6 (lower is better) Translates to: WGSVSTRERQCE*ESASGCEPQCE Trigger: CTCACACTGCGGTTCACACCCGGAGGCGCTCTCGCACTCACACTGCCGCTCACGCGTGCTCACACTCCCCCA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000317995.5 ENST00000524872.5 ENST00000529918.1 |
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| CDS TCA 72 bp | CCTCTTCCTTCTCGGGGAAGGCGACGGTATCTTCGATaGAGCTCAGGTCCGCCATGGGAAGGCCGCGGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: PLPSRGRRRYLR*SSGPPWEGRGA Trigger: GGCCCCGCGGCCTTCCCATGGCGGACCTGAGCTTCATCGAAGATACCGTCGCCTTCCCCGAGAAGGAAGAGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000317995.5 ENST00000524872.5 ENST00000529918.1 |
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| CDS GCA 72 bp | TCCGGGTGTGAACCGCAGTGTGAGTGCAAGCAGGCGTaGGTTCGGACCGAGTGTTCCAGAGACCCGCGTGGG | + |
|
Preference number: 6 (lower is better) Translates to: SGCEPQCECKQA*VRTECSRDPRG Trigger: CCCACGCGGGTCTCTGGAACACTCGGTCCGAACGCACGCCTGCTTGCACTCACACTGCGGTTCACACCCGGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000317995.5 ENST00000524872.5 |
||
| CDS GCA 72 bp | TGCGAGAGCGCCTCCGGGTGTGAACCGCAGTGTGAGTaGAAGCAGGCGTGCGTTCGGACCGAGTGTTCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: CESASGCEPQCE*KQACVRTECSR Trigger: TCTGGAACACTCGGTCCGAACGCACGCCTGCTTGCACTCACACTGCGGTTCACACCCGGAGGCGCTCTCGCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000317995.5 ENST00000524872.5 |
||
| CDS CCA 72 bp | CTCACACGCTCCCCAAGTCCCCTCCTATGTGCTCCTTaGTCACTGGGACATGACTGGTGCTGCTTCACGGGG | + |
|
Preference number: 6 (lower is better) Translates to: LTRSPSPLLCAP*SLGHDWCCFTG Trigger: CCCCGTGAAGCAGCACCAGTCATGTCCCAGTGACCAAGGAGCACATAGGAGGGGACTTGGGGAGCGTGTGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000524872.5 |
||
| CDS CCA 72 bp | CTCACAGGCAGCAAGAAAGACGCTGTGGAGACTAAATaGTACAACCCATGGGGCCAGCGCCATGGCAGTGCC | + |
|
Preference number: 6 (lower is better) Translates to: LTGSKKDAVETK*YNPWGQRHGSA Trigger: GGCACTGCCATGGCGCTGGCCCCATGGGTTGTACCATTTAGTCTCCACAGCGTCTTTCTTGCTGCCTGTGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000529918.1 |
||
| CDS TCA 72 bp | AGGATCAATTCTGCAGGAGACGAGAAGGGTCCACACTaGGGCTCACACGCTCCCCAAGTCCCCTCCTATGTG | + |
|
Preference number: 6 (lower is better) Translates to: RINSAGDEKGPH*GSHAPQVPSYV Trigger: CACATAGGAGGGGACTTGGGGAGCGTGTGAGCCTCAGTGTGGACCCTTCTCGTCTCCTGCAGAATTGATCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000524872.5 |
||
| CDS GCA 72 bp | CGATTCCGTGCGGCTTCCCCACAGCCTCATCAATGCTaGCAAACAGAGTGGAGTTCCAGTGGATCAGATGGA | + |
|
Preference number: 6 (lower is better) Translates to: RFRAASPQPHQC*QTEWSSSGSDG Trigger: TCCATCTGATCCACTGGAACTCCACTCTGTTTGGCAGCATTGATGAGGCTGTGGGGAAGCCGCACGGAATCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000317995.5 ENST00000524872.5 ENST00000528666.1 |
||
| CDS CCA 72 bp | ATTGGTGACTTCACAGTCTCGGCACACCACATAATTTaGGGAGAGGCGGACATCCAACAGCGAGGGGTCATA | + |
|
Preference number: 6 (lower is better) Translates to: IGDFTVSAHHII*GEADIQQRGVI Trigger: TATGACCCCTCGCTGTTGGATGTCCGCCTCTCCCCAAATTATGTGGTGTGCCGAGACTGTGAAGTCACCAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000317995.5 ENST00000524872.5 ENST00000529918.1 |
||
| CDS CCA 72 bp | AAGAAAGACGCTGTGGAGACTAAATGGTACAACCCATaGGGCCAGCGCCATGGCAGTGCCCTATCAAGCATA | + |
|
Preference number: 6 (lower is better) Translates to: KKDAVETKWYNP*GQRHGSALSSI Trigger: TATGCTTGATAGGGCACTGCCATGGCGCTGGCCCCATGGGTTGTACCATTTAGTCTCCACAGCGTCTTTCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000529918.1 |
||
| CDS CCA 72 bp | GCCTCATCAATGCTGCCAAACAGAGTGGAGTTCCAGTaGATCAGATGGAGCACAAGAGGATCACAAGTAGAC | + |
|
Preference number: 6 (lower is better) Translates to: ASSMLPNRVEFQ*IRWSTRGSQVD Trigger: GTCTACTTGTGATCCTCTTGTGCTCCATCTGATCCACTGGAACTCCACTCTGTTTGGCAGCATTGATGAGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000528666.1 |
||
| CDS CCA 72 bp | GCCTCATCAATGCTGCCAAACAGAGTGGAGTTCCAGTaGATCAGATGGAGCTCCATGGGAAAAGCTTTGAAA | + |
|
Preference number: 6 (lower is better) Translates to: ASSMLPNRVEFQ*IRWSSMGKALK Trigger: TTTCAAAGCTTTTCCCATGGAGCTCCATCTGATCCACTGGAACTCCACTCTGTTTGGCAGCATTGATGAGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000317995.5 ENST00000524872.5 |
||
| CDS GCA 72 bp | CGGGGACAACATGGTAAGTTACTAAAGAGGTATGCATaGATGTCACTTTTTCTGGGCCTGAGGGTGTCTGTT | + |
|
Preference number: 6 (lower is better) Translates to: RGQHGKLLKRYA*MSLFLGLRVSV Trigger: AACAGACACCCTCAGGCCCAGAAAAAGTGACATGCATGCATACCTCTTTAGTAACTTACCATGTTGTCCCCG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000524872.5 |
||
| CDS CAA 72 bp | ATAGGACCATTGTCTTCCTCCCTCATGAAGACAGACTaGTTCCTGTCCTCTTTGGCTACTGAAATGCAGCTC | + |
|
Preference number: 6 (lower is better) Translates to: IGPLSSSLMKTD*FLSSLATEMQL Trigger: GAGCTGCATTTCAGTAGCCAAAGAGGACAGGAACAAGTCTGTCTTCATGAGGGAGGAAGACAATGGTCCTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000317995.5 |
||
| CDS TCA 72 bp | CATGAAGACAGACTTGTTCCTGTCCTCTTTGGCTACTaGAATGCAGCTCTAATGACTCTGTCACTAAGAGGC | + |
|
Preference number: 6 (lower is better) Translates to: HEDRLVPVLFGY*NAALMTLSLRG Trigger: GCCTCTTAGTGACAGAGTCATTAGAGCTGCATTTCAGTAGCCAAAGAGGACAGGAACAAGTCTGTCTTCATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000317995.5 ENST00000524872.5 |
||
| CDS CCA 72 bp | TACCTAGCCTCTCTTGAGTTTAGGTTAATAGGAGACTaGTATTCCCCATTAGCATCAGGAAACACCAGACCC | + |
|
Preference number: 6 (lower is better) Translates to: YLASLEFRLIGD*YSPLASGNTRP Trigger: GGGTCTGGTGTTTCCTGATGCTAATGGGGAATACCAGTCTCCTATTAACCTAAACTCAAGAGAGGCTAGGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000317995.5 ENST00000524872.5 ENST00000529918.1 |
||
| CDS GCA 72 bp | CTTATTTCTGAACAGAAGCAGTGCTTAGTGGATCACTaGCTCTTAAGTCCAGTTTTAGTCCTGATGAGGAGG | + |
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Preference number: 6 (lower is better) Translates to: LISEQKQCLVDH*LLSPVLVLMRR Trigger: CCTCCTCATCAGGACTAAAACTGGACTTAAGAGGCAGTGATCCACTAAGCACTGCTTCTGTTCAGAAATAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000528666.1 |
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| CDS CAA 72 bp | CTACACTTTTCATTACTGTTGAGGTTTCTCCAACGGTaGCTTGTCTTCAGCTCGTCACCTATCCAAAGCATC | + |
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Preference number: 6 (lower is better) Translates to: LHFSLLLRFLQR*LVFSSSPIQSI Trigger: GATGCTTTGGATAGGTGACGAGCTGAAGACAAGCAACCGTTGGAGAAACCTCAACAGTAATGAAAAGTGTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000529918.1 |
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| CDS TCA 72 bp | ACCTCATTTTCCTTACTTAATCTGGACATACCCTCATaGAGACAGACTTGTTCCTGTCCTCTTTGGCTACTG | + |
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Preference number: 6 (lower is better) Translates to: TSFSLLNLDIPS*RQTCSCPLWLL Trigger: CAGTAGCCAAAGAGGACAGGAACAAGTCTGTCTTCATGAGGGTATGTCCAGATTAAGTAAGGAAAATGAGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000524872.5 |
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| CDS GCA 72 bp | CATATAAAAGGCACTTCCATAGAAGAAGTATTTCAATaGATGCCAGATATGCTCCCTCCCCTGAGAAACAAG | + |
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Preference number: 6 (lower is better) Translates to: HIKGTSIEEVFQ*MPDMLPPLRNK Trigger: CTTGTTTCTCAGGGGAGGGAGCATATCTGGCATGCATTGAAATACTTCTTCTATGGAAGTGCCTTTTATATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000524872.5 |
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| CDS CAA 72 bp | AGGTATTGTTTTGGACTTCCCCTTATACTGAATATCTaGGAGGATTTCAGTCACAGCCTTCAAGCCAACATG | + |
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Preference number: 6 (lower is better) Translates to: RYCFGLPLILNI*EDFSHSLQANM Trigger: CATGTTGGCTTGAAGGCTGTGACTGAAATCCTCCAAGATATTCAGTATAAGGGGAAGTCCAAAACAATACCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000317995.5 ENST00000524872.5 ENST00000528666.1 |
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| CDS CCA 72 bp | TTATACAGCCATGATTTCCAGCCACTGAAGTGGTACTaGATATTGCATCTGGTCATGAGCAATTTTATATTT | + |
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Preference number: 6 (lower is better) Translates to: LYSHDFQPLKWY*ILHLVMSNFIF Trigger: AAATATAAAATTGCTCATGACCAGATGCAATATCCAGTACCACTTCAGTGGCTGGAAATCATGGCTGTATAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000529918.1 |
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