Pregenerated sensors for CA3 (Homo sapiens)
Ensembl gene IDs: ENSG00000164879Ensembl transcript IDs: ENST00000285381.3, ENST00000520921.1, ENST00000522207.1
Found 85 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | TTTATTGGTTCTGGTGATCAGTACAACTGCTTTGACTTCAAGTGTCATCATTCAACTTCAATAAATGACTaGCTTCTTGCTGGTGTTAAG | + |
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Preference number: 2 (lower is better) Translates to: FIGSGDQYNCFDFKCHHSTSIND*LLAGVK Trigger: CTTAACACCAGCAAGAAGTCAGTCATTTATTGAAGT...TGAATGATGACACTTGAAGTCAAAGCAGTTGTACTGATCACCAGAACCAATAAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000285381.3 |
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| 3UTR GCA 72 bp | ATTTATGTCTTTATTGGTTCTGGTGATCAGTACAACTaGTTTGACTTCAAGTGTCATCATTCACTCTTTTGT | + |
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Preference number: 3 (lower is better) Translates to: IYVFIGSGDQYN*FDFKCHHSLFC Trigger: ACAAAAGAGTGAATGATGACACTTGAAGTCAAAGCAGTTGTACTGATCACCAGAACCAATAAAGACATAAAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000285381.3 |
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| CDS-3UTR GCA 90 bp | CTTGGAGTAAGGAGCACCAGAAGGAGGCAAGGAACCAAGCTCTCCAATGGTAGGGGTCGCCTTCCTCCGTaGTGGACGGCTCCTGCTTTC | + |
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Preference number: 4 (lower is better) Translates to: LGVRSTRRRQGTKLSNGRGRLPP*WTAPAF Trigger: GAAAGCAGGAGCCGTCCAGCACGGAGGAAGGCGACC...CCTACCATTGGAGAGCTTGGTTCCTTGCCTCCTTCTGGTGCTCCTTACTCCAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000285381.3 |
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| CDS-3UTR TCA 90 bp | ATTGGTTCTGGTGATCAGTACAACTGCTTTGACTTCAAGTGTCATCATTCACTCCGCAGGGCGGCGTGGTaGATGAGCCCTGGTAGGTCC | + |
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Preference number: 4 (lower is better) Translates to: IGSGDQYNCFDFKCHHSLRRAAW*MSPGRS Trigger: GGACCTACCAGGGCTCATTCACCACGCCGCCCTGCG...GAGTGAATGATGACACTTGAAGTCAAAGCAGTTGTACTGATCACCAGAACCAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000285381.3 |
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| CDS-3UTR CCA 90 bp | AGGAGGCAAGGAACCAAGCTCTCCAATGGTAGGTTTCCTTTCCTGAAGAGGGCACGGGAACAGGCAGGATaGGTCAAACTTTGTGAAGGG | + |
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Preference number: 4 (lower is better) Translates to: RRQGTKLSNGRFPFLKRAREQAG*VKLCEG Trigger: CCCTTCACAAAGTTTGACCCATCCTGCCTGTTCCCG...TGCCCTCTTCAGGAAAGGAAACCTACCATTGGAGAGCTTGGTTCCTTGCCTCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000285381.3 |
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| CDS-3UTR GCA 90 bp | CTTGGAGTAAGGAGCACCAGAAGGAGGCAAGGAACCAAGCTCTCCAATGGTAGGTTTGGGAAAAGTTCATaGCAGTGGTCAGGACCGTTG | + |
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Preference number: 4 (lower is better) Translates to: LGVRSTRRRQGTKLSNGRFGKSS*QWSGPL Trigger: CAACGGTCCTGACCACTGGCATGAACTTTTCCCAAA...CCTACCATTGGAGAGCTTGGTTCCTTGCCTCCTTCTGGTGCTCCTTACTCCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000285381.3 |
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| CDS-3UTR GCA 90 bp | TCAACAAGTAACTTAGATCTTGGTGACCACATCTCTCACATTCATTGCTCAGTGGCAGCAGCCACACAATaGATTCCTCGCAGGGCGGCG | + |
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Preference number: 4 (lower is better) Translates to: STSNLDLGDHISHIHCSVAAATQ*IPRRAA Trigger: CGCCGCCCTGCGAGGAATGCATTGTGTGGCTGCTGC...CACTGAGCAATGAATGTGAGAGATGTGGTCACCAAGATCTAAGTTACTTGTTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000285381.3 |
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| CDS-3UTR CCA 90 bp | ACAAGTAACTTAGATCTTGGTGACCACATCTCTCACATTCATTGCTCAGTGTGGCGCCTTCCTCCGTGCTaGACGGCTCCTGCTTTCTCT | + |
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Preference number: 4 (lower is better) Translates to: TSNLDLGDHISHIHCSVWRLPPC*TAPAFS Trigger: AGAGAAAGCAGGAGCCGTCCAGCACGGAGGAAGGCG...CCACACTGAGCAATGAATGTGAGAGATGTGGTCACCAAGATCTAAGTTACTTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000285381.3 |
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| CDS-3UTR CCA 90 bp | AGGAGGCAAGGAACCAAGCTCTCCAATGGTAGGTTTCCTTTCCTGAAGAGGGCATTCCCCCTTGGCATTTaGGAAAAGTTCATGCCAGTG | + |
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Preference number: 4 (lower is better) Translates to: RRQGTKLSNGRFPFLKRAFPLGI*EKFMPV Trigger: CACTGGCATGAACTTTTCCCAAATGCCAAGGGGGAA...TGCCCTCTTCAGGAAAGGAAACCTACCATTGGAGAGCTTGGTTCCTTGCCTCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000285381.3 |
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| CDS-3UTR TCA 90 bp | TTCAAGTGTCATCATTCACTCTTTTGTGTTCTAGTGATCATTCATTCCAGCCTCGGGCGGCGTGGTGAATaGGCCCTGGTAGGTCCAGTA | + |
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Preference number: 4 (lower is better) Translates to: FKCHHSLFCVLVIIHSSLGRRGE*ALVGPV Trigger: TACTGGACCTACCAGGGCTCATTCACCACGCCGCCC...GAGGCTGGAATGAATGATCACTAGAACACAAAAGAGTGAATGATGACACTTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000285381.3 |
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| CDS-3UTR GCA 90 bp | TCAACAAGTAACTTAGATCTTGGTGACCACATCTCTCACATTCATTGCTCAGTGGTGCTGGACGGCTCCTaGTTTCTCTTCCCCTGCGTG | + |
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Preference number: 4 (lower is better) Translates to: STSNLDLGDHISHIHCSVVLDGS*FLFPCV Trigger: CACGCAGGGGAAGAGAAAGCAGGAGCCGTCCAGCAC...CACTGAGCAATGAATGTGAGAGATGTGGTCACCAAGATCTAAGTTACTTGTTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000285381.3 |
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| CDS-3UTR GCA 90 bp | AGGAGGCAAGGAACCAAGCTCTCCAATGGTAGGTTTCCTTTCCTGAAGAGGGCATGCAGAGAAGGGTCATaGCTGATGTCTTTAGTATGC | + |
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Preference number: 4 (lower is better) Translates to: RRQGTKLSNGRFPFLKRACREGS*LMSLVC Trigger: GCATACTAAAGACATCAGGCATGACCCTTCTCTGCA...TGCCCTCTTCAGGAAAGGAAACCTACCATTGGAGAGCTTGGTTCCTTGCCTCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000285381.3 |
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| CDS-3UTR GCA 90 bp | TTCAAGTGTCATCATTCACTCTTTTGTGTTCTAGTGATCATTCATTCCAGCCTCCCAGTAGTCCCGGCATaGCGGGAACAGGCAGGATGG | + |
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Preference number: 4 (lower is better) Translates to: FKCHHSLFCVLVIIHSSLPVVPA*REQAGW Trigger: CCATCCTGCCTGTTCCCGGCATGCCGGGACTACTGG...GAGGCTGGAATGAATGATCACTAGAACACAAAAGAGTGAATGATGACACTTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000285381.3 |
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| CDS-3UTR GCA 90 bp | TCATTCACTCTTTTGTGTTCTAGTGATCATTCATTCCAGCCTCCAGTGAGAAACGTGGAGGTCGCCAGTTaGTCACAAGAGGCACTGGGG | + |
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Preference number: 4 (lower is better) Translates to: SFTLLCSSDHSFQPPVRNVEVAS*SQEALG Trigger: CCCCAGTGCCTCTTGTGAGCAACTGGCGACCTCCAC...GTTTCTCACTGGAGGCTGGAATGAATGATCACTAGAACACAAAAGAGTGAATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000285381.3 |
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| CDS-3UTR CCA 90 bp | GTGATCAGTACAACTGCTTTGACTTCAAGTGTCATCATTCACTCTTTTGTGTTCCGTAGCCCCACTCCTTaGCCATGGTCGCCTTCCTCC | + |
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Preference number: 4 (lower is better) Translates to: VISTTALTSSVIIHSFVFRSPTP*PWSPSS Trigger: GGAGGAAGGCGACCATGGCCAAGGAGTGGGGCTACG...GAACACAAAAGAGTGAATGATGACACTTGAAGTCAAAGCAGTTGTACTGATCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000285381.3 |
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| CDS-3UTR CCA 90 bp | TCAACAAGTAACTTAGATCTTGGTGACCACATCTCTCACATTCATTGCTCAGTGCAGAGCTCACGGTCATaGGCTCCTTCAGCAGCAGCC | + |
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Preference number: 4 (lower is better) Translates to: STSNLDLGDHISHIHCSVQSSRS*APSAAA Trigger: GGCTGCTGCTGAAGGAGCCCATGACCGTGAGCTCTG...CACTGAGCAATGAATGTGAGAGATGTGGTCACCAAGATCTAAGTTACTTGTTGA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000285381.3 |
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| CDS-3UTR CCA 90 bp | TCATTCACTCTTTTGTGTTCTAGTGATCATTCATTCCAGCCTCCAGTGAGAAACGGAGGCTCCGCAGCTTaGCCATCTGGTCAGAGCTCA | + |
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Preference number: 4 (lower is better) Translates to: SFTLLCSSDHSFQPPVRNGGSAA*PSGQSS Trigger: TGAGCTCTGACCAGATGGCCAAGCTGCGGAGCCTCC...GTTTCTCACTGGAGGCTGGAATGAATGATCACTAGAACACAAAAGAGTGAATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000285381.3 |
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| CDS-3UTR TCA 90 bp | ACAAGTAACTTAGATCTTGGTGACCACATCTCTCACATTCATTGCTCAGTGTGGATGGGTCAAACTTTGTaGAGGGCGCCTCCTTGCCCT | + |
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Preference number: 4 (lower is better) Translates to: TSNLDLGDHISHIHCSVWMGQTL*RAPPCP Trigger: AGGGCAAGGAGGCGCCCTTCACAAAGTTTGACCCAT...CCACACTGAGCAATGAATGTGAGAGATGTGGTCACCAAGATCTAAGTTACTTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000285381.3 |
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| CDS-3UTR CCA 90 bp | GTCTTTATTGGTTCTGGTGATCAGTACAACTGCTTTGACTTCAAGTGTCATCATCAGGACCGTTGTGACTaGCGTAGCCCCACTCCTTGG | + |
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Preference number: 4 (lower is better) Translates to: VFIGSGDQYNCFDFKCHHQDRCD*RSPTPW Trigger: CCAAGGAGTGGGGCTACGCCAGTCACAACGGTCCTG...ATGATGACACTTGAAGTCAAAGCAGTTGTACTGATCACCAGAACCAATAAAGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000285381.3 |
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| CDS-3UTR CCA 90 bp | TCAACAAGTAACTTAGATCTTGGTGACCACATCTCTCACATTCATTGCTCAGTGCGCAGCTTGGCCATCTaGTCAGAGCTCACGGTCATG | + |
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Preference number: 4 (lower is better) Translates to: STSNLDLGDHISHIHCSVRSLAI*SELTVM Trigger: CATGACCGTGAGCTCTGACCAGATGGCCAAGCTGCG...CACTGAGCAATGAATGTGAGAGATGTGGTCACCAAGATCTAAGTTACTTGTTGA 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000285381.3 |
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| CDS-3UTR CCA 90 bp | ATTGGTTCTGGTGATCAGTACAACTGCTTTGACTTCAAGTGTCATCATTCACTCGCTCACAAGAGGCACTaGGGGCTCGTTCTCAGCACT | + |
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Preference number: 4 (lower is better) Translates to: IGSGDQYNCFDFKCHHSLAHKRH*GLVLST Trigger: AGTGCTGAGAACGAGCCCCCAGTGCCTCTTGTGAGC...GAGTGAATGATGACACTTGAAGTCAAAGCAGTTGTACTGATCACCAGAACCAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000285381.3 |
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| CDS-3UTR TCA 90 bp | GTCTTTATTGGTTCTGGTGATCAGTACAACTGCTTTGACTTCAAGTGTCATCATGCTCCGCTGCATACTTaGCTCCATCCACGGTGTGCT | + |
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Preference number: 4 (lower is better) Translates to: VFIGSGDQYNCFDFKCHHAPLHT*LHPRCA Trigger: AGCACACCGTGGATGGAGTCAAGTATGCAGCGGAGC...ATGATGACACTTGAAGTCAAAGCAGTTGTACTGATCACCAGAACCAATAAAGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000285381.3 |
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| CDS-3UTR CCA 90 bp | TTTATTGGTTCTGGTGATCAGTACAACTGCTTTGACTTCAAGTGTCATCATTCAGCTCGTTCTCAGCACTaGAGAGGAGGCTCCGCAGCT | + |
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Preference number: 4 (lower is better) Translates to: FIGSGDQYNCFDFKCHHSARSQH*RGGSAA Trigger: AGCTGCGGAGCCTCCTCTCCAGTGCTGAGAACGAGC...TGAATGATGACACTTGAAGTCAAAGCAGTTGTACTGATCACCAGAACCAATAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000285381.3 |
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| CDS-3UTR TCA 90 bp | TTTATTGGTTCTGGTGATCAGTACAACTGCTTTGACTTCAAGTGTCATCATTCAGTGTGCTCAGAGCCATaGTCATCCGAAGAGCCCCAG | + |
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Preference number: 4 (lower is better) Translates to: FIGSGDQYNCFDFKCHHSVCSEP*SSEEPQ Trigger: CTGGGGCTCTTCGGATGATCATGGCTCTGAGCACAC...TGAATGATGACACTTGAAGTCAAAGCAGTTGTACTGATCACCAGAACCAATAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000285381.3 |
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| CDS-3UTR TCA 90 bp | TTCAAGTGTCATCATTCACTCTTTTGTGTTCTAGTGATCATTCATTCCAGCCTCTCCAGCAGCCTCATTTaGAGGAAGCTCTCACCACCC | + |
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Preference number: 4 (lower is better) Translates to: FKCHHSLFCVLVIIHSSLSSSLI*RKLSPP Trigger: GGGTGGTGAGAGCTTCCTTCAAATGAGGCTGCTGGA...GAGGCTGGAATGAATGATCACTAGAACACAAAAGAGTGAATGATGACACTTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000285381.3 |
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| CDS-3UTR GCA 90 bp | GTCTTTATTGGTTCTGGTGATCAGTACAACTGCTTTGACTTCAAGTGTCATCATGACACAGACCATGGCTaGAGAGAAGGGTCATGCCTG | + |
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Preference number: 4 (lower is better) Translates to: VFIGSGDQYNCFDFKCHHDTDHG*REGSCL Trigger: CAGGCATGACCCTTCTCTGCAGCCATGGTCTGTGTC...ATGATGACACTTGAAGTCAAAGCAGTTGTACTGATCACCAGAACCAATAAAGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000285381.3 |
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| CDS-3UTR GCA 90 bp | TCATTCACTCTTTTGTGTTCTAGTGATCATTCATTCCAGCCTCCAGTGAGAAACCTGATGTCTTTAGTATaGAGCTCAACGGGCGACTGG | + |
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Preference number: 4 (lower is better) Translates to: SFTLLCSSDHSFQPPVRNLMSLV*SSTGDW Trigger: CCAGTCGCCCGTTGAGCTGCATACTAAAGACATCAG...GTTTCTCACTGGAGGCTGGAATGAATGATCACTAGAACACAAAAGAGTGAATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000285381.3 |
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| CDS-3UTR GCA 90 bp | TCATTCACTCTTTTGTGTTCTAGTGATCATTCATTCCAGCCTCCAGTGAGAAACGCGATCCCATCGCGCTaGTTCAGGGCTTCTTTAAAA | + |
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Preference number: 4 (lower is better) Translates to: SFTLLCSSDHSFQPPVRNAIPSR*FRASLK Trigger: TTTTAAAGAAGCCCTGAAGCAGCGCGATGGGATCGC...GTTTCTCACTGGAGGCTGGAATGAATGATCACTAGAACACAAAAGAGTGAATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000285381.3 |
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| CDS-3UTR GCA 90 bp | AGGAGGCAAGGAACCAAGCTCTCCAATGGTAGGTTTCCTTTCCTGAAGAGGGCAATCTCTCACATTCATTaGTCAGTGTGGAAAAATGAA | + |
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Preference number: 4 (lower is better) Translates to: RRQGTKLSNGRFPFLKRAISHIH*SVWKNE Trigger: TTCATTTTTCCACACTGAGCAATGAATGTGAGAGAT...TGCCCTCTTCAGGAAAGGAAACCTACCATTGGAGAGCTTGGTTCCTTGCCTCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000285381.3 |
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| CDS-3UTR CCA 90 bp | GTGATCAGTACAACTGCTTTGACTTCAAGTGTCATCATTCACTCTTTTGTGTTCAGCTCAACGGGCGACTaGTTTTCCCCCTTGGCATTT | + |
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Preference number: 4 (lower is better) Translates to: VISTTALTSSVIIHSFVFSSTGD*FSPLAF Trigger: AAATGCCAAGGGGGAAAACCAGTCGCCCGTTGAGCT...GAACACAAAAGAGTGAATGATGACACTTGAAGTCAAAGCAGTTGTACTGATCAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000285381.3 |
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| CDS-3UTR CCA 90 bp | ACAAGTAACTTAGATCTTGGTGACCACATCTCTCACATTCATTGCTCAGTGTGGATAAGACACAGACCATaGCTGCAGAGAAGGGTCATG | + |
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Preference number: 4 (lower is better) Translates to: TSNLDLGDHISHIHCSVWIRHRP*LQRRVM Trigger: CATGACCCTTCTCTGCAGCCATGGTCTGTGTCTTAT...CCACACTGAGCAATGAATGTGAGAGATGTGGTCACCAAGATCTAAGTTACTTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000285381.3 |
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| CDS-3UTR CCA 90 bp | TCAACAAGTAACTTAGATCTTGGTGACCACATCTCTCACATTCATTGCTCAGTGTCCCATTATTCAGGATaGTCTTGGCAGAGCCACCAT | + |
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Preference number: 4 (lower is better) Translates to: STSNLDLGDHISHIHCSVSHYSG*SWQSHH Trigger: ATGGTGGCTCTGCCAAGACCATCCTGAATAATGGGA...CACTGAGCAATGAATGTGAGAGATGTGGTCACCAAGATCTAAGTTACTTGTTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000285381.3 |
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| CDS-3UTR CCA 90 bp | GTGATCAGTACAACTGCTTTGACTTCAAGTGTCATCATTCACTCTTTTGTGTTCGTTATTGATAGGCTGTaGAGGTCGCCAGTTGCTCAC | + |
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Preference number: 4 (lower is better) Translates to: VISTTALTSSVIIHSFVFVIDRL*RSPVAH Trigger: GTGAGCAACTGGCGACCTCCACAGCCTATCAATAAC...GAACACAAAAGAGTGAATGATGACACTTGAAGTCAAAGCAGTTGTACTGATCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000285381.3 |
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| CDS-3UTR TCA 90 bp | TCAACAAGTAACTTAGATCTTGGTGACCACATCTCTCACATTCATTGCTCAGTGACCCCCTCTCAGCATTaGCCTATCATAAGTATCATC | + |
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Preference number: 4 (lower is better) Translates to: STSNLDLGDHISHIHCSVTPSQH*PIISII Trigger: GATGATACTTATGATAGGTCAATGCTGAGAGGGGGT...CACTGAGCAATGAATGTGAGAGATGTGGTCACCAAGATCTAAGTTACTTGTTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000285381.3 |
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| CDS-3UTR GCA 90 bp | GTCTTTATTGGTTCTGGTGATCAGTACAACTGCTTTGACTTCAAGTGTCATCATCAAATGAAGCTCCGCTaGATACTTGACTCCATCCAC | + |
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Preference number: 4 (lower is better) Translates to: VFIGSGDQYNCFDFKCHHQMKLR*ILDSIH Trigger: GTGGATGGAGTCAAGTATGCAGCGGAGCTTCATTTG...ATGATGACACTTGAAGTCAAAGCAGTTGTACTGATCACCAGAACCAATAAAGAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000285381.3 |
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| CDS-3UTR CCA 90 bp | GTCTTTATTGGTTCTGGTGATCAGTACAACTGCTTTGACTTCAAGTGTCATCATTATTCAGGATGGTCTTaGCAGAGCCACCATCATAAG | + |
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Preference number: 4 (lower is better) Translates to: VFIGSGDQYNCFDFKCHHYSGWS*QSHHHK Trigger: CTTATGATGGTGGCTCTGCCAAGACCATCCTGAATA...ATGATGACACTTGAAGTCAAAGCAGTTGTACTGATCACCAGAACCAATAAAGAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000285381.3 |
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| CDS-3UTR CCA 90 bp | TCATTCACTCTTTTGTGTTCTAGTGATCATTCATTCCAGCCTCCAGTGAGAAACGCATCAAGGAAAATCTaGAACTCGCCATTCTCATGT | + |
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Preference number: 4 (lower is better) Translates to: SFTLLCSSDHSFQPPVRNASRKI*NSPFSC Trigger: ACATGAGAATGGCGAGTTCCAGATTTTCCTTGATGC...GTTTCTCACTGGAGGCTGGAATGAATGATCACTAGAACACAAAAGAGTGAATGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000285381.3 |
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| CDS-3UTR TCA 90 bp | TCATTCACTCTTTTGTGTTCTAGTGATCATTCATTCCAGCCTCCAGTGAGAAACCTCAGTGTGGAAAAATaGAATAGACTTGGAGTAAGG | + |
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Preference number: 4 (lower is better) Translates to: SFTLLCSSDHSFQPPVRNLSVEK*NRLGVR Trigger: CCTTACTCCAAGTCTATTTCATTTTTCCACACTGAG...GTTTCTCACTGGAGGCTGGAATGAATGATCACTAGAACACAAAAGAGTGAATGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000285381.3 |
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| CDS-3UTR TCA 90 bp | TCAACAAGTAACTTAGATCTTGGTGACCACATCTCTCACATTCATTGCTCAGTGTCAGTACAACTGCTTTaGCTTCAAGTGTCATCATTC | + |
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Preference number: 4 (lower is better) Translates to: STSNLDLGDHISHIHCSVSVQLL*LQVSSF Trigger: GAATGATGACACTTGAAGTCAAAGCAGTTGTACTGA...CACTGAGCAATGAATGTGAGAGATGTGGTCACCAAGATCTAAGTTACTTGTTGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000285381.3 |
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| CDS-3UTR GCA 90 bp | TCAACAAGTAACTTAGATCTTGGTGACCACATCTCTCACATTCATTGCTCAGTGGGTGATCAGTACAACTaGTTTGACTTCAAGTGTCAT | + |
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Preference number: 4 (lower is better) Translates to: STSNLDLGDHISHIHCSVGDQYN*FDFKCH Trigger: ATGACACTTGAAGTCAAAGCAGTTGTACTGATCACC...CACTGAGCAATGAATGTGAGAGATGTGGTCACCAAGATCTAAGTTACTTGTTGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000285381.3 |
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| CDS-3UTR TCA 90 bp | TCATTCACTCTTTTGTGTTCTAGTGATCATTCATTCCAGCCTCCAGTGAGAAACACTTCAATAAATGACTaGCTTCTTGCTGGTGTTAAG | + |
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Preference number: 4 (lower is better) Translates to: SFTLLCSSDHSFQPPVRNTSIND*LLAGVK Trigger: CTTAACACCAGCAAGAAGTCAGTCATTTATTGAAGT...GTTTCTCACTGGAGGCTGGAATGAATGATCACTAGAACACAAAAGAGTGAATGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000285381.3 |
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| 3UTR CAA 72 bp | ATGTCTTTATTGGTTCTGGTGATCAGTACAACTGCTTaGACTTCAAGTGTCATCATTCACTCTTTTGTGTTC | + |
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Preference number: 4 (lower is better) Translates to: MSLLVLVISTTA*TSSVIIHSFVF Trigger: GAACACAAAAGAGTGAATGATGACACTTGAAGTCAAAGCAGTTGTACTGATCACCAGAACCAATAAAGACAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000285381.3 |
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| CDS-3UTR GCA 90 bp | GTGATCAGTACAACTGCTTTGACTTCAAGTGTCATCATTCACTCTTTTGTGTTCCTTAATCTTGTCCAATaGATCAAGGAAAATCTGGAA | + |
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Preference number: 4 (lower is better) Translates to: VISTTALTSSVIIHSFVFLNLVQ*IKENLE Trigger: TTCCAGATTTTCCTTGATGCATTGGACAAGATTAAG...GAACACAAAAGAGTGAATGATGACACTTGAAGTCAAAGCAGTTGTACTGATCAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000285381.3 |
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| CDS CCA 90 bp | AGTGGTCAGGACCGTTGTGACTGGCGTAGCCCCACTCCTTGGCCATaGTCGCCTTCCTCCGTGCTGGACGGCTCCTGCTTTCTCTTCCCC | + |
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Preference number: 5 (lower is better) Translates to: SGQDRCDWRSPTPWP*SPSSVLDGSCFLFP Trigger: GGGGAAGAGAAAGCAGGAGCCGTCCAGCACGGAGGAAGGCGACCATGGCCAAGGAGTGGGGCTACGCCAGTCACAACGGTCCTGACCACT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000285381.3 ENST00000522207.1 |
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| CDS CCA 90 bp | CATGCCAGTGGTCAGGACCGTTGTGACTGGCGTAGCCCCACTCCTTaGCCATGGTCGCCTTCCTCCGTGCTGGACGGCTCCTGCTTTCTC | + |
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Preference number: 5 (lower is better) Translates to: HASGQDRCDWRSPTP*PWSPSSVLDGSCFL Trigger: GAGAAAGCAGGAGCCGTCCAGCACGGAGGAAGGCGACCATGGCCAAGGAGTGGGGCTACGCCAGTCACAACGGTCCTGACCACTGGCATG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000285381.3 ENST00000522207.1 |
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| CDS CCA 90 bp | GTTATTGATAGGCTGTGGAGGTCGCCAGTTGCTCACAAGAGGCACTaGGGGCTCGTTCTCAGCACTGGAGAGGAGGCTCCGCAGCTTGGC | + |
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Preference number: 5 (lower is better) Translates to: VIDRLWRSPVAHKRH*GLVLSTGEEAPQLG Trigger: GCCAAGCTGCGGAGCCTCCTCTCCAGTGCTGAGAACGAGCCCCCAGTGCCTCTTGTGAGCAACTGGCGACCTCCACAGCCTATCAATAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000285381.3 |
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| CDS TCA 90 bp | ATTGTGGACTCTTGGGTAGCTCCTTGTGGGGCAGGGTGCAGGGTGTaGGGGTCTGCTCTTGGCTTACTCATTGGCTCCAGACCCACACCA | + |
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Preference number: 5 (lower is better) Translates to: IVDSWVAPCGAGCRV*GSALGLLIGSRPTP Trigger: TGGTGTGGGTCTGGAGCCAATGAGTAAGCCAAGAGCAGACCCTCACACCCTGCACCCTGCCCCACAAGGAGCTACCCAAGAGTCCACAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000520921.1 |
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| CDS CCA 90 bp | GCAGGAAGGTGTGGCCATGATTGTGGACTCTTGGGTAGCTCCTTGTaGGGCAGGGTGCAGGGTGTGAGGGTCTGCTCTTGGCTTACTCAT | + |
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Preference number: 5 (lower is better) Translates to: AGRCGHDCGLLGSSL*GRVQGVRVCSWLTH Trigger: ATGAGTAAGCCAAGAGCAGACCCTCACACCCTGCACCCTGCCCCACAAGGAGCTACCCAAGAGTCCACAATCATGGCCACACCTTCCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000520921.1 |
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| CDS-3UTR CAA 90 bp | CTTGGAGTAAGGAGCACCAGAAGGAGGCAAGGAACCAAGCTCTCCAATGGTAGGAGGAGGCTCCGCAGCTaGGCCATCTGGTCAGAGCTC | + |
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Preference number: 5 (lower is better) Translates to: LGVRSTRRRQGTKLSNGRRRLRS*AIWSEL Trigger: GAGCTCTGACCAGATGGCCAAGCTGCGGAGCCTCCT...CCTACCATTGGAGAGCTTGGTTCCTTGCCTCCTTCTGGTGCTCCTTACTCCAAG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000285381.3 |
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| CDS GCA 90 bp | CTGCTGCCTGTTGGTGAGCTGCAATTTAGCTGGTGCTGCTGTGCCTaGCGGTGGTTGCCAAGTCTCTCCGTATCCACATTCCTTTCTTGT | + |
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Preference number: 5 (lower is better) Translates to: LLPVGELQFSWCCCA*RWLPSLSVSTFLSC Trigger: ACAAGAAAGGAATGTGGATACGGAGAGACTTGGCAACCACCGGCAGGCACAGCAGCACCAGCTAAATTGCAGCTCACCAACAGGCAGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000520921.1 |
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| CDS-3UTR CAA 90 bp | CTTGGAGTAAGGAGCACCAGAAGGAGGCAAGGAACCAAGCTCTCCAATGGTAGGGTGAAGGGCGCCTCCTaGCCCTTTGTCTTAATCTTG | + |
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Preference number: 5 (lower is better) Translates to: LGVRSTRRRQGTKLSNGRVKGAS*PFVLIL Trigger: CAAGATTAAGACAAAGGGCAAGGAGGCGCCCTTCAC...CCTACCATTGGAGAGCTTGGTTCCTTGCCTCCTTCTGGTGCTCCTTACTCCAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000285381.3 |
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| CDS GCA 90 bp | ACAGACCATGGCTGCAGAGAAGGGTCATGCCTGATGTCTTTAGTATaGAGCTCAACGGGCGACTGGTTTTCCCCCTTGGCATTTGGGAAA | + |
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Preference number: 5 (lower is better) Translates to: TDHGCREGSCLMSLV*SSTGDWFSPLAFGK Trigger: TTTCCCAAATGCCAAGGGGGAAAACCAGTCGCCCGTTGAGCTGCATACTAAAGACATCAGGCATGACCCTTCTCTGCAGCCATGGTCTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000285381.3 ENST00000520921.1 ENST00000522207.1 |
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| CDS GCA 90 bp | TTGGTGAGCTGCAATTTAGCTGGTGCTGCTGTGCCTGCCGGTGGTTaGCAAGTCTCTCCGTATCCACATTCCTTTCTTGTCATGGGAGAT | + |
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Preference number: 5 (lower is better) Translates to: LVSCNLAGAAVPAGG*QVSPYPHSFLVMGD Trigger: ATCTCCCATGACAAGAAAGGAATGTGGATACGGAGAGACTTGGCAACCACCGGCAGGCACAGCAGCACCAGCTAAATTGCAGCTCACCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000520921.1 |
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| CDS CCA 90 bp | ATTCAGGATGGTCTTGGCAGAGCCACCATCATAAGACACAGACCATaGCTGCAGAGAAGGGTCATGCCTGATGTCTTTAGTATGCAGCTC | + |
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Preference number: 5 (lower is better) Translates to: IQDGLGRATIIRHRP*LQRRVMPDVFSMQL Trigger: GAGCTGCATACTAAAGACATCAGGCATGACCCTTCTCTGCAGCCATGGTCTGTGTCTTATGATGGTGGCTCTGCCAAGACCATCCTGAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000285381.3 ENST00000520921.1 ENST00000522207.1 |
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| CDS-3UTR CAA 90 bp | TCAACAAGTAACTTAGATCTTGGTGACCACATCTCTCACATTCATTGCTCAGTGAGCTCCGCTGCATACTaGACTCCATCCACGGTGTGC | + |
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Preference number: 5 (lower is better) Translates to: STSNLDLGDHISHIHCSVSSAAY*TPSTVC Trigger: GCACACCGTGGATGGAGTCAAGTATGCAGCGGAGCT...CACTGAGCAATGAATGTGAGAGATGTGGTCACCAAGATCTAAGTTACTTGTTGA 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000285381.3 |
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| CDS CCA 90 bp | AAGTATCATCAAATACAACTCGGCAGGTCTTCCCATTATTCAGGATaGTCTTGGCAGAGCCACCATCATAAGACACAGACCATGGCTGCA | + |
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Preference number: 5 (lower is better) Translates to: KYHQIQLGRSSHYSG*SWQSHHHKTQTMAA Trigger: TGCAGCCATGGTCTGTGTCTTATGATGGTGGCTCTGCCAAGACCATCCTGAATAATGGGAAGACCTGCCGAGTTGTATTTGATGATACTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000285381.3 ENST00000520921.1 ENST00000522207.1 |
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| CDS TCA 90 bp | TGTCCACCATCAAAAGTCTTCAAATCTTATAAACAATTGGTGCTGTaGGCAGGAAGGTGTGGCCATGATTGTGGACTCTTGGGTAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: CPPSKVFKSYKQLVL*AGRCGHDCGLLGSS Trigger: GGAGCTACCCAAGAGTCCACAATCATGGCCACACCTTCCTGCTCACAGCACCAATTGTTTATAAGATTTGAAGACTTTTGATGGTGGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000520921.1 |
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| CDS-3UTR CAA 90 bp | TTCAAGTGTCATCATTCACTCTTTTGTGTTCTAGTGATCATTCATTCCAGCCTCCTCACCACCCTGTTATaGATAGGCTGTGGAGGTCGC | + |
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Preference number: 5 (lower is better) Translates to: FKCHHSLFCVLVIIHSSLLTTLL*IGCGGR Trigger: GCGACCTCCACAGCCTATCAATAACAGGGTGGTGAG...GAGGCTGGAATGAATGATCACTAGAACACAAAAGAGTGAATGATGACACTTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000285381.3 |
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| CDS-3UTR CAA 90 bp | AGGAGGCAAGGAACCAAGCTCTCCAATGGTAGGTTTCCTTTCCTGAAGAGGGCACCATTTATGTCTTTATaGGTTCTGGTGATCAGTACA | + |
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Preference number: 5 (lower is better) Translates to: RRQGTKLSNGRFPFLKRAPFMSL*VLVIST Trigger: TGTACTGATCACCAGAACCAATAAAGACATAAATGG...TGCCCTCTTCAGGAAAGGAAACCTACCATTGGAGAGCTTGGTTCCTTGCCTCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000285381.3 |
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| CDS CCA 90 bp | CCTGTAAGTGTCCACCATCAAAAGTCTTCAAATCTTATAAACAATTaGTGCTGTGAGCAGGAAGGTGTGGCCATGATTGTGGACTCTTGG | + |
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Preference number: 5 (lower is better) Translates to: PVSVHHQKSSNLINN*CCEQEGVAMIVDSW Trigger: CCAAGAGTCCACAATCATGGCCACACCTTCCTGCTCACAGCACCAATTGTTTATAAGATTTGAAGACTTTTGATGGTGGACACTTACAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000520921.1 |
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| CDS GCA 90 bp | GTAAGTGTCCACCATCAAAAGTCTTCAAATCTTATAAACAATTGGTaGTGTGAGCAGGAAGGTGTGGCCATGATTGTGGACTCTTGGGTA | + |
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Preference number: 5 (lower is better) Translates to: VSVHHQKSSNLINNW*CEQEGVAMIVDSWV Trigger: TACCCAAGAGTCCACAATCATGGCCACACCTTCCTGCTCACAGCACCAATTGTTTATAAGATTTGAAGACTTTTGATGGTGGACACTTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000520921.1 |
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| CDS-3UTR CAA 90 bp | GTGATCAGTACAACTGCTTTGACTTCAAGTGTCATCATTCACTCTTTTGTGTTCTTTCCCCCTTGGCATTaGGGAAAAGTTCATGCCAGT | + |
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Preference number: 5 (lower is better) Translates to: VISTTALTSSVIIHSFVFFPPWH*GKVHAS Trigger: ACTGGCATGAACTTTTCCCAAATGCCAAGGGGGAAA...GAACACAAAAGAGTGAATGATGACACTTGAAGTCAAAGCAGTTGTACTGATCAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000285381.3 |
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| CDS-3UTR CAA 90 bp | TCAACAAGTAACTTAGATCTTGGTGACCACATCTCTCACATTCATTGCTCAGTGGACCCCCTCTCAGCATaGACCTATCATAAGTATCAT | + |
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Preference number: 5 (lower is better) Translates to: STSNLDLGDHISHIHCSVDPLSA*TYHKYH Trigger: ATGATACTTATGATAGGTCAATGCTGAGAGGGGGTC...CACTGAGCAATGAATGTGAGAGATGTGGTCACCAAGATCTAAGTTACTTGTTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000285381.3 |
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| CDS CCA 90 bp | TCCTTGCCCTTTGTCTTAATCTTGTCCAATGCATCAAGGAAAATCTaGAACTCGCCATTCTCATGTCCTATCTTCAGAAAAATGCCAATC | + |
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Preference number: 5 (lower is better) Translates to: SLPFVLILSNASRKI*NSPFSCPIFRKMPI Trigger: GATTGGCATTTTTCTGAAGATAGGACATGAGAATGGCGAGTTCCAGATTTTCCTTGATGCATTGGACAAGATTAAGACAAAGGGCAAGGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000285381.3 |
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| CDS-3UTR CAA 90 bp | TCATTCACTCTTTTGTGTTCTAGTGATCATTCATTCCAGCCTCCAGTGAGAAACATCAGTACAACTGCTTaGACTTCAAGTGTCATCATT | + |
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Preference number: 5 (lower is better) Translates to: SFTLLCSSDHSFQPPVRNISTTA*TSSVII Trigger: AATGATGACACTTGAAGTCAAAGCAGTTGTACTGAT...GTTTCTCACTGGAGGCTGGAATGAATGATCACTAGAACACAAAAGAGTGAATGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000285381.3 |
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| CDS CCA 72 bp | GGTCAGGACCGTTGTGACTGGCGTAGCCCCACTCCTTaGCCATGGTCGCCTTCCTCCGTGCTGGACGGCTCC | + |
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Preference number: 6 (lower is better) Translates to: GQDRCDWRSPTP*PWSPSSVLDGS Trigger: GGAGCCGTCCAGCACGGAGGAAGGCGACCATGGCCAAGGAGTGGGGCTACGCCAGTCACAACGGTCCTGACC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000285381.3 ENST00000522207.1 |
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| CDS CCA 72 bp | GACCGTTGTGACTGGCGTAGCCCCACTCCTTGGCCATaGTCGCCTTCCTCCGTGCTGGACGGCTCCTGCTTT | + |
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Preference number: 6 (lower is better) Translates to: DRCDWRSPTPWP*SPSSVLDGSCF Trigger: AAAGCAGGAGCCGTCCAGCACGGAGGAAGGCGACCATGGCCAAGGAGTGGGGCTACGCCAGTCACAACGGTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000285381.3 ENST00000522207.1 |
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| CDS CCA 72 bp | AGGCTGTGGAGGTCGCCAGTTGCTCACAAGAGGCACTaGGGGCTCGTTCTCAGCACTGGAGAGGAGGCTCCG | + |
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Preference number: 6 (lower is better) Translates to: RLWRSPVAHKRH*GLVLSTGEEAP Trigger: CGGAGCCTCCTCTCCAGTGCTGAGAACGAGCCCCCAGTGCCTCTTGTGAGCAACTGGCGACCTCCACAGCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000285381.3 |
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| CDS GCA 72 bp | AGCTCCTTGTGGGGCAGGGTGCAGGGTGTGAGGGTCTaGTCTTGGCTTACTCATTGGCTCCAGACCCACACC | + |
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Preference number: 6 (lower is better) Translates to: SSLWGRVQGVRV*SWLTHWLQTHT Trigger: GGTGTGGGTCTGGAGCCAATGAGTAAGCCAAGAGCAGACCCTCACACCCTGCACCCTGCCCCACAAGGAGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000520921.1 |
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| CDS CAA 72 bp | CTTGTGGGGCAGGGTGCAGGGTGTGAGGGTCTGCTCTaGGCTTACTCATTGGCTCCAGACCCACACCAGCAC | + |
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Preference number: 6 (lower is better) Translates to: LVGQGAGCEGLL*AYSLAPDPHQH Trigger: GTGCTGGTGTGGGTCTGGAGCCAATGAGTAAGCCAAGAGCAGACCCTCACACCCTGCACCCTGCCCCACAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000520921.1 |
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| CDS CCA 72 bp | TTGTGGGGCAGGGTGCAGGGTGTGAGGGTCTGCTCTTaGCTTACTCATTGGCTCCAGACCCACACCAGCACA | + |
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Preference number: 6 (lower is better) Translates to: LWGRVQGVRVCS*LTHWLQTHTST Trigger: TGTGCTGGTGTGGGTCTGGAGCCAATGAGTAAGCCAAGAGCAGACCCTCACACCCTGCACCCTGCCCCACAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000520921.1 |
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| CDS CCA 72 bp | TGTGGCCATGATTGTGGACTCTTGGGTAGCTCCTTGTaGGGCAGGGTGCAGGGTGTGAGGGTCTGCTCTTGG | + |
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Preference number: 6 (lower is better) Translates to: CGHDCGLLGSSL*GRVQGVRVCSW Trigger: CCAAGAGCAGACCCTCACACCCTGCACCCTGCCCCACAAGGAGCTACCCAAGAGTCCACAATCATGGCCACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000520921.1 |
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| CDS CAA 72 bp | AGGTGTGGCCATGATTGTGGACTCTTGGGTAGCTCCTaGTGGGGCAGGGTGCAGGGTGTGAGGGTCTGCTCT | + |
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Preference number: 6 (lower is better) Translates to: RCGHDCGLLGSS*WGRVQGVRVCS Trigger: AGAGCAGACCCTCACACCCTGCACCCTGCCCCACAAGGAGCTACCCAAGAGTCCACAATCATGGCCACACCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000520921.1 |
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| CDS CCA 72 bp | TCCGCAGCTTGGCCATCTGGTCAGAGCTCACGGTCATaGGCTCCTTCAGCAGCAGCCACACAATGCATTCCT | + |
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Preference number: 6 (lower is better) Translates to: SAAWPSGQSSRS*APSAAATQCIP Trigger: AGGAATGCATTGTGTGGCTGCTGCTGAAGGAGCCCATGACCGTGAGCTCTGACCAGATGGCCAAGCTGCGGA 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000285381.3 |
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| CDS GCA 72 bp | GGCTGCAGAGAAGGGTCATGCCTGATGTCTTTAGTATaGAGCTCAACGGGCGACTGGTTTTCCCCCTTGGCA | + |
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Preference number: 6 (lower is better) Translates to: GCREGSCLMSLV*SSTGDWFSPLA Trigger: TGCCAAGGGGGAAAACCAGTCGCCCGTTGAGCTGCATACTAAAGACATCAGGCATGACCCTTCTCTGCAGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000285381.3 ENST00000520921.1 ENST00000522207.1 |
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| CDS GCA 72 bp | GTTGGTGAGCTGCAATTTAGCTGGTGCTGCTGTGCCTaGCGGTGGTTGCCAAGTCTCTCCGTATCCACATTC | + |
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Preference number: 6 (lower is better) Translates to: VGELQFSWCCCA*RWLPSLSVSTF Trigger: GAATGTGGATACGGAGAGACTTGGCAACCACCGGCAGGCACAGCAGCACCAGCTAAATTGCAGCTCACCAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000520921.1 |
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| CDS CAA 90 bp | AAGATCCAGCAGCCTCATTTGAAGGAAGCTCTCACCACCCTGTTATaGATAGGCTGTGGAGGTCGCCAGTTGCTCACAAGAGGCACTGGG | + |
|
Preference number: 6 (lower is better) Translates to: KIQQPHLKEALTTLL*IGCGGRQLLTRGTG Trigger: CCCAGTGCCTCTTGTGAGCAACTGGCGACCTCCACAGCCTATCAATAACAGGGTGGTGAGAGCTTCCTTCAAATGAGGCTGCTGGATCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000285381.3 |
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| CDS GCA 72 bp | TGCAATTTAGCTGGTGCTGCTGTGCCTGCCGGTGGTTaGCAAGTCTCTCCGTATCCACATTCCTTTCTTGTC | + |
|
Preference number: 6 (lower is better) Translates to: CNLAGAAVPAGG*QVSPYPHSFLV Trigger: GACAAGAAAGGAATGTGGATACGGAGAGACTTGGCAACCACCGGCAGGCACAGCAGCACCAGCTAAATTGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000520921.1 |
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| CDS TCA 72 bp | GGTTCCAGTGAACCAAATGAAGCTCCGCTGCATACTTaGCTCCATCCACGGTGTGCTCAGAGCCATGATCAT | + |
|
Preference number: 6 (lower is better) Translates to: GSSEPNEAPLHT*LHPRCAQSHDH Trigger: ATGATCATGGCTCTGAGCACACCGTGGATGGAGTCAAGTATGCAGCGGAGCTTCATTTGGTTCACTGGAACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000285381.3 |
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| CDS TCA 72 bp | GGATTATGGCAGTTCCTCTTACCTCCGCTGCATACTTaGCTCCATCCACGGTGTGCTCAGAGCCATGATCAT | + |
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Preference number: 6 (lower is better) Translates to: GLWQFLLPPLHT*LHPRCAQSHDH Trigger: ATGATCATGGCTCTGAGCACACCGTGGATGGAGTCAAGTATGCAGCGGAGGTAAGAGGAACTGCCATAATCC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000522207.1 |
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| CDS CCA 72 bp | GGTCTTGGCAGAGCCACCATCATAAGACACAGACCATaGCTGCAGAGAAGGGTCATGCCTGATGTCTTTAGT | + |
|
Preference number: 6 (lower is better) Translates to: GLGRATIIRHRP*LQRRVMPDVFS Trigger: ACTAAAGACATCAGGCATGACCCTTCTCTGCAGCCATGGTCTGTGTCTTATGATGGTGGCTCTGCCAAGACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000285381.3 ENST00000520921.1 ENST00000522207.1 |
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| CDS GCA 72 bp | GGGCGCCTCCTTGCCCTTTGTCTTAATCTTGTCCAATaGATCAAGGAAAATCTGGAACTCGCCATTCTCATG | + |
|
Preference number: 6 (lower is better) Translates to: GRLLALCLNLVQ*IKENLELAILM Trigger: CATGAGAATGGCGAGTTCCAGATTTTCCTTGATGCATTGGACAAGATTAAGACAAAGGGCAAGGAGGCGCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000285381.3 |
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| CDS CCA 72 bp | CAAATACAACTCGGCAGGTCTTCCCATTATTCAGGATaGTCTTGGCAGAGCCACCATCATAAGACACAGACC | + |
|
Preference number: 6 (lower is better) Translates to: QIQLGRSSHYSG*SWQSHHHKTQT Trigger: GGTCTGTGTCTTATGATGGTGGCTCTGCCAAGACCATCCTGAATAATGGGAAGACCTGCCGAGTTGTATTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000285381.3 ENST00000520921.1 ENST00000522207.1 |
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| CDS GCA 72 bp | TTCAGAAAAATGCCAATCACAGCGATCCCATCGCGCTaGTTCAGGGCTTCTTTAAAAGTGTTATACTTCGGG | + |
|
Preference number: 6 (lower is better) Translates to: FRKMPITAIPSR*FRASLKVLYFG Trigger: CCCGAAGTATAACACTTTTAAAGAAGCCCTGAAGCAGCGCGATGGGATCGCTGTGATTGGCATTTTTCTGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000285381.3 |
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| CDS CCA 72 bp | TTTGTCTTAATCTTGTCCAATGCATCAAGGAAAATCTaGAACTCGCCATTCTCATGTCCTATCTTCAGAAAA | + |
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Preference number: 6 (lower is better) Translates to: FVLILSNASRKI*NSPFSCPIFRK Trigger: TTTTCTGAAGATAGGACATGAGAATGGCGAGTTCCAGATTTTCCTTGATGCATTGGACAAGATTAAGACAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000285381.3 |
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