Pregenerated sensors for CA14 (Homo sapiens)
Ensembl gene IDs: ENSG00000118298Ensembl transcript IDs: ENST00000369111.9, ENST00000483993.3, ENST00000582010.3, ENST00000607652.5, ENST00000647854.1
Found 53 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 72 bp | AAAGGCTCGGTGCCAGGCTGGTCATATCCGTGGGGCTaGAGAGCAGGCAAATCAGGGTCAAATGTCACACTG | + |
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Preference number: 3 (lower is better) Translates to: KGSVPGWSYPWG*RAGKSGSNVTL Trigger: CAGTGTGACATTTGACCCTGATTTGCCTGCTCTGCAGCCCCACGGATATGACCAGCCTGGCACCGAGCCTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000483993.3 |
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| CDS-3UTR CCA 90 bp | CTTCCTGATAGGCATGAAGGGAAGTCATCCACATCCATGGTATCTGAGAAGGAAGGCTCGGTGCCAGGCTaGTCATATCCGTGGGGCTGC | + |
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Preference number: 4 (lower is better) Translates to: LPDRHEGKSSTSMVSEKEGSVPG*SYPWGC Trigger: GCAGCCCCACGGATATGACCAGCCTGGCACCGAGCC...TTCCTTCTCAGATACCATGGATGTGGATGACTTCCCTTCATGCCTATCAGGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000369111.9 ENST00000647854.1 |
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| CDS-3UTR TCA 90 bp | CTTCCTGATAGGCATGAAGGGAAGTCATCCACATCCATGGTATCTGAGAAGGAAGCTGGCCAATGGTCCTaGCCATGTGGGCCCTCATAC | + |
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Preference number: 4 (lower is better) Translates to: LPDRHEGKSSTSMVSEKEAGQWS*PCGPSY Trigger: GTATGAGGGCCCACATGGTCAGGACCATTGGCCAGC...TTCCTTCTCAGATACCATGGATGTGGATGACTTCCCTTCATGCCTATCAGGAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000369111.9 ENST00000647854.1 |
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| CDS-3UTR TCA 90 bp | CTTCCTGATAGGCATGAAGGGAAGTCATCCACATCCATGGTATCTGAGAAGGAATCATACGTCCAGTGTTaGCCCCCATCTGCAGCCAGG | + |
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Preference number: 4 (lower is better) Translates to: LPDRHEGKSSTSMVSEKESYVQC*PPSAAR Trigger: CCTGGCTGCAGATGGGGGTCAACACTGGACGTATGA...TTCCTTCTCAGATACCATGGATGTGGATGACTTCCCTTCATGCCTATCAGGAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000369111.9 ENST00000647854.1 |
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| CDS-3UTR TCA 90 bp | CTTCCTGATAGGCATGAAGGGAAGTCATCCACATCCATGGTATCTGAGAAGGAAAGCAAGGGGGAGTTGTaGGCGAGCCATTGTAGCGGA | + |
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Preference number: 4 (lower is better) Translates to: LPDRHEGKSSTSMVSEKESKGEL*ASHCSG Trigger: TCCGCTACAATGGCTCGCTCACAACTCCCCCTTGCT...TTCCTTCTCAGATACCATGGATGTGGATGACTTCCCTTCATGCCTATCAGGAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000369111.9 ENST00000647854.1 |
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| CDS-3UTR TCA 90 bp | CTTCCTGATAGGCATGAAGGGAAGTCATCCACATCCATGGTATCTGAGAAGGAAAGACCATGCGCTGATTaGGAGGCTGAAGGGCTCGGT | + |
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Preference number: 4 (lower is better) Translates to: LPDRHEGKSSTSMVSEKERPCAD*EAEGLG Trigger: ACCGAGCCCTTCAGCCTCTCAATCAGCGCATGGTCT...TTCCTTCTCAGATACCATGGATGTGGATGACTTCCCTTCATGCCTATCAGGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000369111.9 ENST00000647854.1 |
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| CDS-3UTR GCA 90 bp | CTTCCTGATAGGCATGAAGGGAAGTCATCCACATCCATGGTATCTGAGAAGGAAGGTCCAAAGGCTCGGTaGCAGGCTGGTCATATCCGT | + |
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Preference number: 4 (lower is better) Translates to: LPDRHEGKSSTSMVSEKEGPKAR*QAGHIR Trigger: ACGGATATGACCAGCCTGGCACCGAGCCTTTGGACC...TTCCTTCTCAGATACCATGGATGTGGATGACTTCCCTTCATGCCTATCAGGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000369111.9 ENST00000647854.1 |
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| CDS-3UTR CCA 90 bp | CTTCCTGATAGGCATGAAGGGAAGTCATCCACATCCATGGTATCTGAGAAGGAAAAGGTGGCTCTGAACTaGTGTATGTGGGGACGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: LPDRHEGKSSTSMVSEKEKVALN*CMWGRG Trigger: CCCCCGTCCCCACATACACCAGTTCAGAGCCACCTT...TTCCTTCTCAGATACCATGGATGTGGATGACTTCCCTTCATGCCTATCAGGAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000369111.9 |
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| CDS-3UTR TCA 90 bp | CTTCCTGATAGGCATGAAGGGAAGTCATCCACATCCATGGTATCTGAGAAGGAAGCAGCTCTCTTAGGTTaGAGGGAGGCACTGAGGTCT | + |
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Preference number: 4 (lower is better) Translates to: LPDRHEGKSSTSMVSEKEAALLG*REALRS Trigger: AGACCTCAGTGCCTCCCTTCAACCTAAGAGAGCTGC...TTCCTTCTCAGATACCATGGATGTGGATGACTTCCCTTCATGCCTATCAGGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000369111.9 ENST00000647854.1 |
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| CDS-3UTR GCA 90 bp | CTTCCTGATAGGCATGAAGGGAAGTCATCCACATCCATGGTATCTGAGAAGGAATCATATCCGTGGGGCTaGAGAGCAGGCAAATCAGGG | + |
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Preference number: 4 (lower is better) Translates to: LPDRHEGKSSTSMVSEKESYPWG*RAGKSG Trigger: CCCTGATTTGCCTGCTCTGCAGCCCCACGGATATGA...TTCCTTCTCAGATACCATGGATGTGGATGACTTCCCTTCATGCCTATCAGGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000369111.9 ENST00000647854.1 |
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| CDS-3UTR GCA 90 bp | CTTCCTGATAGGCATGAAGGGAAGTCATCCACATCCATGGTATCTGAGAAGGAAGTGTGGCCATTGTTGTaGAGGTCCAAAGGCTCGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LPDRHEGKSSTSMVSEKEVWPLL*RSKGSV Trigger: CACCGAGCCTTTGGACCTGCACAACAATGGCCACAC...TTCCTTCTCAGATACCATGGATGTGGATGACTTCCCTTCATGCCTATCAGGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000369111.9 ENST00000647854.1 |
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| CDS-3UTR CCA 90 bp | CTTCCTGATAGGCATGAAGGGAAGTCATCCACATCCATGGTATCTGAGAAGGAACTGTCTCTGTCTCTGTaGGCTTCCAGGGGATTCGGT | + |
|
Preference number: 4 (lower is better) Translates to: LPDRHEGKSSTSMVSEKELSLSL*ASRGFG Trigger: ACCGAATCCCCTGGAAGCCCACAGAGACAGAGACAG...TTCCTTCTCAGATACCATGGATGTGGATGACTTCCCTTCATGCCTATCAGGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369111.9 |
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| CDS-3UTR CCA 90 bp | CTTCCTGATAGGCATGAAGGGAAGTCATCCACATCCATGGTATCTGAGAAGGAAATGGTCCTGACCATGTaGGCCCTCATACGTCCAGTG | + |
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Preference number: 4 (lower is better) Translates to: LPDRHEGKSSTSMVSEKEMVLTM*ALIRPV Trigger: CACTGGACGTATGAGGGCCCACATGGTCAGGACCAT...TTCCTTCTCAGATACCATGGATGTGGATGACTTCCCTTCATGCCTATCAGGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000369111.9 ENST00000647854.1 |
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| CDS-3UTR CCA 90 bp | CTTCCTGATAGGCATGAAGGGAAGTCATCCACATCCATGGTATCTGAGAAGGAACTCAGGGTAAGAGGCTaGCCAATGGTCCTGACCATG | + |
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Preference number: 4 (lower is better) Translates to: LPDRHEGKSSTSMVSEKELRVRG*PMVLTM Trigger: CATGGTCAGGACCATTGGCCAGCCTCTTACCCTGAG...TTCCTTCTCAGATACCATGGATGTGGATGACTTCCCTTCATGCCTATCAGGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000369111.9 ENST00000647854.1 |
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| CDS-3UTR TCA 90 bp | CTTCCTGATAGGCATGAAGGGAAGTCATCCACATCCATGGTATCTGAGAAGGAATGGCTTGTGCTGAGGTaGAGACCACACTCTTTCGGT | + |
|
Preference number: 4 (lower is better) Translates to: LPDRHEGKSSTSMVSEKEWLVLR*RPHSFG Trigger: ACCGAAAGAGTGTGGTCTTCACCTCAGCACAAGCCA...TTCCTTCTCAGATACCATGGATGTGGATGACTTCCCTTCATGCCTATCAGGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000369111.9 ENST00000647854.1 |
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| CDS-3UTR TCA 90 bp | CTTCCTGATAGGCATGAAGGGAAGTCATCCACATCCATGGTATCTGAGAAGGAAAGTCGTGGCTTGTGCTaGGGTGAAGACCACACTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LPDRHEGKSSTSMVSEKESRGLC*GEDHTL Trigger: AAGAGTGTGGTCTTCACCTCAGCACAAGCCACGACT...TTCCTTCTCAGATACCATGGATGTGGATGACTTCCCTTCATGCCTATCAGGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000369111.9 ENST00000647854.1 |
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| CDS-3UTR CCA 90 bp | CTTCCTGATAGGCATGAAGGGAAGTCATCCACATCCATGGTATCTGAGAAGGAACTCCACTCCACTAGCTaGCCAGCGACTTTACAACTG | + |
|
Preference number: 4 (lower is better) Translates to: LPDRHEGKSSTSMVSEKELHSTS*PATLQL Trigger: CAGTTGTAAAGTCGCTGGCCAGCTAGTGGAGTGGAG...TTCCTTCTCAGATACCATGGATGTGGATGACTTCCCTTCATGCCTATCAGGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369111.9 |
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| CDS-3UTR CCA 90 bp | CTTCCTGATAGGCATGAAGGGAAGTCATCCACATCCATGGTATCTGAGAAGGAACCTGGAATGACAGCCTaGGTCCATTCCTCTCTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LPDRHEGKSSTSMVSEKEPGMTA*VHSSLG Trigger: TCCTAGAGAGGAATGGACCCAGGCTGTCATTCCAGG...TTCCTTCTCAGATACCATGGATGTGGATGACTTCCCTTCATGCCTATCAGGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000369111.9 ENST00000647854.1 |
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| CDS-3UTR TCA 90 bp | CTTCCTGATAGGCATGAAGGGAAGTCATCCACATCCATGGTATCTGAGAAGGAACTTTTAAGGTGGCTCTaGACTGGTGTATGTGGGGAC | + |
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Preference number: 4 (lower is better) Translates to: LPDRHEGKSSTSMVSEKELLRWL*TGVCGD Trigger: GTCCCCACATACACCAGTTCAGAGCCACCTTAAAAG...TTCCTTCTCAGATACCATGGATGTGGATGACTTCCCTTCATGCCTATCAGGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000369111.9 |
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| CDS-3UTR GCA 90 bp | CTTCCTGATAGGCATGAAGGGAAGTCATCCACATCCATGGTATCTGAGAAGGAACTCTTTATCTCCCTCTaGAGTCTCCACTCCACTAGC | + |
|
Preference number: 4 (lower is better) Translates to: LPDRHEGKSSTSMVSEKELFISL*SLHSTS Trigger: GCTAGTGGAGTGGAGACTGCAGAGGGAGATAAAGAG...TTCCTTCTCAGATACCATGGATGTGGATGACTTCCCTTCATGCCTATCAGGAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369111.9 |
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| CDS-3UTR CCA 90 bp | CTTCCTGATAGGCATGAAGGGAAGTCATCCACATCCATGGTATCTGAGAAGGAACTCCTACAGTGTTTCTaGCCAGATCCTACACCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: LPDRHEGKSSTSMVSEKELLQCF*PDPTPH Trigger: ATGGGGTGTAGGATCTGGCCAGAAACACTGTAGGAG...TTCCTTCTCAGATACCATGGATGTGGATGACTTCCCTTCATGCCTATCAGGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000369111.9 ENST00000647854.1 |
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| CDS-3UTR TCA 90 bp | CTTCCTGATAGGCATGAAGGGAAGTCATCCACATCCATGGTATCTGAGAAGGAAGGCACTGAGGTCTTCTaGTCTTTATGCCTGACTTCA | + |
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Preference number: 4 (lower is better) Translates to: LPDRHEGKSSTSMVSEKEGTEVF*SLCLTS Trigger: TGAAGTCAGGCATAAAGATCAGAAGACCTCAGTGCC...TTCCTTCTCAGATACCATGGATGTGGATGACTTCCCTTCATGCCTATCAGGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000369111.9 ENST00000647854.1 |
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| CDS-3UTR TCA 90 bp | CTTCCTGATAGGCATGAAGGGAAGTCATCCACATCCATGGTATCTGAGAAGGAAGTTGAAGGGAGGCACTaGGGTCTTCTGATCTTTATG | + |
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Preference number: 4 (lower is better) Translates to: LPDRHEGKSSTSMVSEKEVEGRH*GLLIFM Trigger: CATAAAGATCAGAAGACCTCAGTGCCTCCCTTCAAC...TTCCTTCTCAGATACCATGGATGTGGATGACTTCCCTTCATGCCTATCAGGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000369111.9 ENST00000647854.1 |
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| CDS-3UTR GCA 90 bp | CTTCCTGATAGGCATGAAGGGAAGTCATCCACATCCATGGTATCTGAGAAGGAACTGAGAAGGAATTTATaGCTCAGTCGTGGCTTGTGC | + |
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Preference number: 4 (lower is better) Translates to: LPDRHEGKSSTSMVSEKELRRNL*LSRGLC Trigger: GCACAAGCCACGACTGAGGCATAAATTCCTTCTCAG...TTCCTTCTCAGATACCATGGATGTGGATGACTTCCCTTCATGCCTATCAGGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000369111.9 ENST00000647854.1 |
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| CDS-3UTR GCA 90 bp | CTTCCTGATAGGCATGAAGGGAAGTCATCCACATCCATGGTATCTGAGAAGGAAGGGAAGGAGGACATCTaGTTACTACTCCTACAGTGT | + |
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Preference number: 4 (lower is better) Translates to: LPDRHEGKSSTSMVSEKEGKEDI*LLLLQC Trigger: ACACTGTAGGAGTAGTAAGCAGATGTCCTCCTTCCC...TTCCTTCTCAGATACCATGGATGTGGATGACTTCCCTTCATGCCTATCAGGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000369111.9 ENST00000647854.1 |
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| CDS-3UTR CCA 90 bp | CTTCCTGATAGGCATGAAGGGAAGTCATCCACATCCATGGTATCTGAGAAGGAAGGTATCATGGGTTTCTaGATCCCCAGGACAAATCTC | + |
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Preference number: 4 (lower is better) Translates to: LPDRHEGKSSTSMVSEKEGIMGF*IPRTNL Trigger: GAGATTTGTCCTGGGGATCCAGAAACCCATGATACC...TTCCTTCTCAGATACCATGGATGTGGATGACTTCCCTTCATGCCTATCAGGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369111.9 |
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| CDS-3UTR CCA 90 bp | CTTCCTGATAGGCATGAAGGGAAGTCATCCACATCCATGGTATCTGAGAAGGAACTGTCTGAATATCGATaGGCGACTGGGCATTGTTTC | + |
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Preference number: 4 (lower is better) Translates to: LPDRHEGKSSTSMVSEKELSEYR*ATGHCF Trigger: GAAACAATGCCCAGTCGCCCATCGATATTCAGACAG...TTCCTTCTCAGATACCATGGATGTGGATGACTTCCCTTCATGCCTATCAGGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000369111.9 ENST00000647854.1 |
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| CDS-3UTR CCA 90 bp | CTTCCTGATAGGCATGAAGGGAAGTCATCCACATCCATGGTATCTGAGAAGGAACAAGGAGAACTCATCTaGAGCAATCTCTTCTGTGCC | + |
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Preference number: 4 (lower is better) Translates to: LPDRHEGKSSTSMVSEKEQGELI*SNLFCA Trigger: GGCACAGAAGAGATTGCTCCAGATGAGTTCTCCTTG...TTCCTTCTCAGATACCATGGATGTGGATGACTTCCCTTCATGCCTATCAGGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000647854.1 |
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| CDS-3UTR CCA 90 bp | CTTCCTGATAGGCATGAAGGGAAGTCATCCACATCCATGGTATCTGAGAAGGAATCAGCATTTCACCTGTaGTATACGAGGATCCTGCTT | + |
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Preference number: 4 (lower is better) Translates to: LPDRHEGKSSTSMVSEKESAFHL*YTRILL Trigger: AAGCAGGATCCTCGTATACCACAGGTGAAATGCTGA...TTCCTTCTCAGATACCATGGATGTGGATGACTTCCCTTCATGCCTATCAGGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000369111.9 ENST00000647854.1 |
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| CDS-3UTR TCA 90 bp | CTTCCTGATAGGCATGAAGGGAAGTCATCCACATCCATGGTATCTGAGAAGGAATTCCAGCTGTTCCATTaGAATCTGGGACCTTCTATA | + |
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Preference number: 4 (lower is better) Translates to: LPDRHEGKSSTSMVSEKEFQLFH*NLGPSI Trigger: TATAGAAGGTCCCAGATTTCAATGGAACAGCTGGAA...TTCCTTCTCAGATACCATGGATGTGGATGACTTCCCTTCATGCCTATCAGGAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000369111.9 ENST00000647854.1 |
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| CDS-3UTR GCA 90 bp | CTTCCTGATAGGCATGAAGGGAAGTCATCCACATCCATGGTATCTGAGAAGGAATACAATGTGGAGCTCTaGAAATGTGGCTTCACTGTT | + |
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Preference number: 4 (lower is better) Translates to: LPDRHEGKSSTSMVSEKEYNVEL*KCGFTV Trigger: AACAGTGAAGCCACATTTGCAGAGCTCCACATTGTA...TTCCTTCTCAGATACCATGGATGTGGATGACTTCCCTTCATGCCTATCAGGAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000369111.9 ENST00000647854.1 |
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| CDS-3UTR GCA 90 bp | CTTCCTGATAGGCATGAAGGGAAGTCATCCACATCCATGGTATCTGAGAAGGAAGAGTGTATTTATCTCTaGTTCTCTTGCTGTCTCTGT | + |
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Preference number: 4 (lower is better) Translates to: LPDRHEGKSSTSMVSEKEECIYL*FSCCLC Trigger: ACAGAGACAGCAAGAGAAGCAGAGATAAATACACTC...TTCCTTCTCAGATACCATGGATGTGGATGACTTCCCTTCATGCCTATCAGGAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369111.9 |
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| CDS-3UTR CCA 90 bp | CTTCCTGATAGGCATGAAGGGAAGTCATCCACATCCATGGTATCTGAGAAGGAAAGTCATCCACATCCATaGTATCTGAGAAGGAATTTA | + |
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Preference number: 4 (lower is better) Translates to: LPDRHEGKSSTSMVSEKESHPHP*YLRRNL Trigger: TAAATTCCTTCTCAGATACCATGGATGTGGATGACT...TTCCTTCTCAGATACCATGGATGTGGATGACTTCCCTTCATGCCTATCAGGAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000369111.9 ENST00000647854.1 |
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| CDS TCA 90 bp | GGGGCCGCACAGTGTGTCTTCCTGCCAGGTGAGGAGGTCCCAGTGTaGAAGGGTTGTCGGGAGGCCTTGAGATCTGCTCACCCTCATACG | + |
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Preference number: 5 (lower is better) Translates to: GAAQCVFLPGEEVPV*KGCREALRSAHPHT Trigger: CGTATGAGGGTGAGCAGATCTCAAGGCCTCCCGACAACCCTTTCACACTGGGACCTCCTCACCTGGCAGGAAGACACACTGTGCGGCCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000607652.5 |
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| CDS TCA 90 bp | CCACCCGCACAGTGTGTCTTCCTGCCAGGTGAGGAGGTCCCAGTGTaGAAGGGTTGTCGGGAGGCCTTGAGATCTGCTCACCCTCATACG | + |
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Preference number: 5 (lower is better) Translates to: PPAQCVFLPGEEVPV*KGCREALRSAHPHT Trigger: CGTATGAGGGTGAGCAGATCTCAAGGCCTCCCGACAACCCTTTCACACTGGGACCTCCTCACCTGGCAGGAAGACACACTGTGCGGGTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000582010.3 |
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| CDS GCA 90 bp | GAGAAGGTAAAGGAAGTCTCCTCCCACCCGCACAGTGTGTCTTCCTaGCAGGTGAGGAGGTCCCAGTGTGAAAGGGTTGTCGGGAGGCCT | + |
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Preference number: 5 (lower is better) Translates to: EKVKEVSSHPHSVSS*QVRRSQCERVVGRP Trigger: AGGCCTCCCGACAACCCTTTCACACTGGGACCTCCTCACCTGGCAGGAAGACACACTGTGCGGGTGGGAGGAGACTTCCTTTACCTTCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000582010.3 |
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| CDS TCA 90 bp | GCAGAAGCGTGGGAGAGGTGTTACTTTGGGGAGTGGGAAGGGGTCTaGAGTTACAACTGTGTCTCACCTCACCTCGTTTCTCCACCACTT | + |
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Preference number: 5 (lower is better) Translates to: AEAWERCYFGEWEGV*SYNCVSPHLVSPPL Trigger: AAGTGGTGGAGAAACGAGGTGAGGTGAGACACAGTTGTAACTTCAGACCCCTTCCCACTCCCCAAAGTAACACCTCTCCCACGCTTCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000607652.5 |
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| CDS-3UTR CAA 90 bp | CTTCCTGATAGGCATGAAGGGAAGTCATCCACATCCATGGTATCTGAGAAGGAACTCATACGTCCAGTGTaGACCCCCATCTGCAGCCAG | + |
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Preference number: 5 (lower is better) Translates to: LPDRHEGKSSTSMVSEKELIRPV*TPICSQ Trigger: CTGGCTGCAGATGGGGGTCAACACTGGACGTATGAG...TTCCTTCTCAGATACCATGGATGTGGATGACTTCCCTTCATGCCTATCAGGAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000369111.9 ENST00000647854.1 |
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| CDS-3UTR CAA 90 bp | CTTCCTGATAGGCATGAAGGGAAGTCATCCACATCCATGGTATCTGAGAAGGAACCCAGGACAAATCTCTaGCTGCCTCTTTGCCCTCTC | + |
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Preference number: 5 (lower is better) Translates to: LPDRHEGKSSTSMVSEKEPRTNL*LPLCPL Trigger: GAGAGGGCAAAGAGGCAGCAAGAGATTTGTCCTGGG...TTCCTTCTCAGATACCATGGATGTGGATGACTTCCCTTCATGCCTATCAGGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369111.9 |
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| CDS-3UTR CAA 90 bp | CTTCCTGATAGGCATGAAGGGAAGTCATCCACATCCATGGTATCTGAGAAGGAAAGCAGCTCTCTTAGGTaGAAGGGAGGCACTGAGGTC | + |
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Preference number: 5 (lower is better) Translates to: LPDRHEGKSSTSMVSEKESSSLR*KGGTEV Trigger: GACCTCAGTGCCTCCCTTCAACCTAAGAGAGCTGCT...TTCCTTCTCAGATACCATGGATGTGGATGACTTCCCTTCATGCCTATCAGGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000369111.9 ENST00000647854.1 |
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| CDS TCA 90 bp | AGGACTAGAGGACTGAGTTGTGTCCTAAGTTCTAAGGAAGAGAAGTaGGGCAAGGAGAACTCATCTGGAGCAATCTCTTCTGTGCCTGCC | + |
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Preference number: 5 (lower is better) Translates to: RTRGLSCVLSSKEEK*GKENSSGAISSVPA Trigger: GGCAGGCACAGAAGAGATTGCTCCAGATGAGTTCTCCTTGCCTCACTTCTCTTCCTTAGAACTTAGGACACAACTCAGTCCTCTAGTCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000647854.1 |
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| CDS CCA 90 bp | AACCTAGAGAGATACGGTCTCCTGGAGGCCCCTATCAAGTGGCCTTaGGATTCAGATATCCTGACTTCTCATCATTCACTTCTTGCTCTC | + |
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Preference number: 5 (lower is better) Translates to: NLERYGLLEAPIKWP*DSDILTSHHSLLAL Trigger: GAGAGCAAGAAGTGAATGATGAGAAGTCAGGATATCTGAATCCCAAGGCCACTTGATAGGGGCCTCCAGGAGACCGTATCTCTCTAGGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000582010.3 |
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| CDS-3UTR CAA 90 bp | CTTCCTGATAGGCATGAAGGGAAGTCATCCACATCCATGGTATCTGAGAAGGAAATACGAGGATCCTGCTaGGATGAAAGAAGCAAAGAC | + |
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Preference number: 5 (lower is better) Translates to: LPDRHEGKSSTSMVSEKEIRGSC*DERSKD Trigger: GTCTTTGCTTCTTTCATCCAAGCAGGATCCTCGTAT...TTCCTTCTCAGATACCATGGATGTGGATGACTTCCCTTCATGCCTATCAGGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000369111.9 ENST00000647854.1 |
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| CDS CCA 90 bp | AAAAATAACCTAGAGAGATACGGTCTCCTGGAGGCCCCTATCAAGTaGCCTTGGGATTCAGATATCCTGACTTCTCATCATTCACTTCTT | + |
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Preference number: 5 (lower is better) Translates to: KNNLERYGLLEAPIK*PWDSDILTSHHSLL Trigger: AAGAAGTGAATGATGAGAAGTCAGGATATCTGAATCCCAAGGCCACTTGATAGGGGCCTCCAGGAGACCGTATCTCTCTAGGTTATTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000582010.3 |
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| CDS-3UTR CAA 90 bp | CTTCCTGATAGGCATGAAGGGAAGTCATCCACATCCATGGTATCTGAGAAGGAATTTCCAGCTGTTCCATaGAAATCTGGGACCTTCTAT | + |
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Preference number: 5 (lower is better) Translates to: LPDRHEGKSSTSMVSEKEFPAVP*KSGTFY Trigger: ATAGAAGGTCCCAGATTTCAATGGAACAGCTGGAAA...TTCCTTCTCAGATACCATGGATGTGGATGACTTCCCTTCATGCCTATCAGGAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000369111.9 ENST00000647854.1 |
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| CDS TCA 72 bp | AGGACTAGGACAGGCAGAGAGAGAGGGAGGGAGGAGTaGGAGAGAGAGAGAGAGAGCGAGCGAGCTCCTGGC | + |
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Preference number: 6 (lower is better) Translates to: RTRTGRERGREE*ERERESERAPG Trigger: GCCAGGAGCTCGCTCGCTCTCTCTCTCTCTCTCTCACTCCTCCCTCCCTCTCTCTCTGCCTGTCCTAGTCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000369111.9 ENST00000582010.3 ENST00000607652.5 |
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| CDS TCA 72 bp | CAGTGTGTCTTCCTGCCAGGTGAGGAGGTCCCAGTGTaGAAGGGTTGTCGGGAGGCCTTGAGATCTGCTCAC | + |
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Preference number: 6 (lower is better) Translates to: QCVFLPGEEVPV*KGCREALRSAH Trigger: GTGAGCAGATCTCAAGGCCTCCCGACAACCCTTTCACACTGGGACCTCCTCACCTGGCAGGAAGACACACTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000582010.3 ENST00000607652.5 |
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| CDS TCA 72 bp | AGGAGGTCCCAGTGTGAAAGGGTTGTCGGGAGGCCTTaGGATCTGCTCACCCTCATACGTCCAGTGTTGACC | + |
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Preference number: 6 (lower is better) Translates to: RRSQCERVVGRP*DLLTLIRPVLT Trigger: GGTCAACACTGGACGTATGAGGGTGAGCAGATCTCAAGGCCTCCCGACAACCCTTTCACACTGGGACCTCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000582010.3 ENST00000607652.5 |
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| CDS TCA 72 bp | GAGAGAGAGAGAGAGAGAGCGAGCGAGCTCCTGGCGTaGGTGTATTTATCTCTGCTTCTCTTGCTGTCTCTG | + |
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Preference number: 6 (lower is better) Translates to: ERERERASELLA*VYLSLLLLLSL Trigger: CAGAGACAGCAAGAGAAGCAGAGATAAATACACTCACGCCAGGAGCTCGCTCGCTCTCTCTCTCTCTCTCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000369111.9 ENST00000582010.3 ENST00000607652.5 |
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| CDS TCA 72 bp | CCACCCAGGTTAAGACCCCAGTTGTATAGGGATGGGTaGGGTAGGAGTCCTGTTGAGTCTCATGCTGCAGTT | + |
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Preference number: 6 (lower is better) Translates to: PPRLRPQLYRDG*GRSPVESHAAV Trigger: AACTGCAGCATGAGACTCAACAGGACTCCTACCTCACCCATCCCTATACAACTGGGGTCTTAACCTGGGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000582010.3 |
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| CDS GCA 72 bp | CTCACCCCTGACCTCCAGCTCTGTCCCAATTTCAGATaGAGGTTAGGGGTAGGATGGATTAGGATAGACGGA | + |
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Preference number: 6 (lower is better) Translates to: LTPDLQLCPNFR*RLGVGWIRIDG Trigger: TCCGTCTATCCTAATCCATCCTACCCCTAACCTGCATCTGAAATTGGGACAGAGCTGGAGGTCAGGGGTGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000582010.3 |
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| CDS CCA 72 bp | CTAGAGAGATACGGTCTCCTGGAGGCCCCTATCAAGTaGCCTTGGGATTCAGATATCCTGACTTCTCATCAT | + |
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Preference number: 6 (lower is better) Translates to: LERYGLLEAPIK*PWDSDILTSHH Trigger: ATGATGAGAAGTCAGGATATCTGAATCCCAAGGCCACTTGATAGGGGCCTCCAGGAGACCGTATCTCTCTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000582010.3 |
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| CDS CCA 72 bp | AGATACGGTCTCCTGGAGGCCCCTATCAAGTGGCCTTaGGATTCAGATATCCTGACTTCTCATCATTCACTT | + |
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Preference number: 6 (lower is better) Translates to: RYGLLEAPIKWP*DSDILTSHHSL Trigger: AAGTGAATGATGAGAAGTCAGGATATCTGAATCCCAAGGCCACTTGATAGGGGCCTCCAGGAGACCGTATCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000582010.3 |
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