Pregenerated sensors for CA13 (Homo sapiens)
Ensembl gene IDs: ENSG00000185015Ensembl transcript IDs: ENST00000321764.4, ENST00000517298.5, ENST00000517831.5, ENST00000518392.1, ENST00000522631.1
Found 42 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CGGCAGGAGTGCGAGACCGTGAACCCGGTCCGGGGCGCTCCCGCCTaGGTCCTCCAGACGGCAGAGGCGTGCGGGGAAGGCGCCCGCGCC | + |
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Preference number: 5 (lower is better) Translates to: RQECETVNPVRGAPA*VLQTAEACGEGARA Trigger: GGCGCGGGCGCCTTCCCCGCACGCCTCTGCCGTCTGGAGGACGCAGGCGGGAGCGCCCCGGACCGGGTTCACGGTCTCGCACTCCTGCCG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000321764.4 |
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| CDS CCA 90 bp | CGTCCTCCAGACGGCAGAGGCGTGCGGGGAAGGCGCCCGCGCCGCTaGCTGACTCCTGGGGCGCGAGTCTCTCTTAGTTTGGACTCGGGA | + |
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Preference number: 5 (lower is better) Translates to: RPPDGRGVRGRRPRR*LTPGARVSLSLDSG Trigger: TCCCGAGTCCAAACTAAGAGAGACTCGCGCCCCAGGAGTCAGCCAGCGGCGCGGGCGCCTTCCCCGCACGCCTCTGCCGTCTGGAGGACG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000321764.4 |
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| CDS CCA 90 bp | CCCTGGAAACCACCCAGAGGTGCACAGCGCCTCCTCCTGGGAGAGTaGCAGAGTCAGCCGGGAGTCCGCGGCGGAGCGCTGACCTCCGGT | + |
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Preference number: 5 (lower is better) Translates to: PWKPPRGAQRLLLGE*QSQPGVRGGALTSG Trigger: ACCGGAGGTCAGCGCTCCGCCGCGGACTCCCGGCTGACTCTGCCACTCTCCCAGGAGGAGGCGCTGTGCACCTCTGGGTGGTTTCCAGGG 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000517298.5 ENST00000517831.5 |
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| CDS TCA 90 bp | TCCTGGGAGAGTGGCAGAGTCAGCCGGGAGTCCGCGGCGGAGCGCTaGCCTCCGGTGCGGCGGTCTTCACTGTGCAGTCTCAGAAGCACC | + |
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Preference number: 5 (lower is better) Translates to: SWESGRVSRESAAER*PPVRRSSLCSLRST Trigger: GGTGCTTCTGAGACTGCACAGTGAAGACCGCCGCACCGGAGGTCAGCGCTCCGCCGCGGACTCCCGGCTGACTCTGCCACTCTCCCAGGA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000517298.5 ENST00000517831.5 |
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| CDS GCA 90 bp | GTGGCAGAGTCAGCCGGGAGTCCGCGGCGGAGCGCTGACCTCCGGTaGGGCGGTCTTCACTGTGCAGTCTCAGAAGCACCTCGGGAAGTT | + |
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Preference number: 5 (lower is better) Translates to: VAESAGSPRRSADLR*GGLHCAVSEAPREV Trigger: AACTTCCCGAGGTGCTTCTGAGACTGCACAGTGAAGACCGCCGCACCGGAGGTCAGCGCTCCGCCGCGGACTCCCGGCTGACTCTGCCAC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000517298.5 ENST00000517831.5 |
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| CDS GCA 90 bp | CGGCGGTCTTCACTGTGCAGTCTCAGAAGCACCTCGGGAAGTTTCTaGACAAGTACCCACGCCAGCAAGGGGAGACTTGGCTGGCTCCAT | + |
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Preference number: 5 (lower is better) Translates to: RRSSLCSLRSTSGSF*TSTHASKGRLGWLH Trigger: ATGGAGCCAGCCAAGTCTCCCCTTGCTGGCGTGGGTACTTGTGCAGAAACTTCCCGAGGTGCTTCTGAGACTGCACAGTGAAGACCGCCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000517298.5 ENST00000517831.5 |
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| CDS GCA 90 bp | CCTAGGGCTGTGGTAGGGGGTGCCACAGGGATAGTCTCAAGCACTTaGAGAAAGCCCTTAACCGCCCTTTCCCCAGTAATTTCTCCAGTC | + |
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Preference number: 5 (lower is better) Translates to: PRAVVGGATGIVSST*RKPLTALSPVISPV Trigger: GACTGGAGAAATTACTGGGGAAAGGGCGGTTAAGGGCTTTCTGCAAGTGCTTGAGACTATCCCTGTGGCACCCCCTACCACAGCCCTAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000522631.1 |
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| CDS CCA 90 bp | GGAAGTTTCTGCACAAGTACCCACGCCAGCAAGGGGAGACTTGGCTaGCTCCATAACGCCCCAAACTCGCTTGAGCTGAGGATAAGTCTG | + |
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Preference number: 5 (lower is better) Translates to: GSFCTSTHASKGRLG*LHNAPNSLELRISL Trigger: CAGACTTATCCTCAGCTCAAGCGAGTTTGGGGCGTTATGGAGCCAGCCAAGTCTCCCCTTGCTGGCGTGGGTACTTGTGCAGAAACTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000517298.5 ENST00000517831.5 |
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| CDS TCA 90 bp | TCCATCTGGTTCATGAGCTGCCTCAACAAAGCTGGGGTATTTGTCTaGATTCCAGTGAACAACATGGAGCTCTGCAGCATAGCTCACTCC | + |
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Preference number: 5 (lower is better) Translates to: SIWFMSCLNKAGVFV*IPVNNMELCSIAHS Trigger: GGAGTGAGCTATGCTGCAGAGCTCCATGTTGTTCACTGGAATTCAGACAAATACCCCAGCTTTGTTGAGGCAGCTCATGAACCAGATGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000321764.4 ENST00000517298.5 |
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| CDS TCA 90 bp | CCGGGTGACAGAGTGAGACCCTCTTGCAGCTTCATAGTAATCTACTaGTGCGAGTCACTTTTCCTTCACTGCAAAGCATTAACCATCTCT | + |
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Preference number: 5 (lower is better) Translates to: PGDRVRPSCSFIVIY*CESLFLHCKALTIS Trigger: AGAGATGGTTAATGCTTTGCAGTGAAGGAAAAGTGACTCGCATCAGTAGATTACTATGAAGCTGCAAGAGGGTCTCACTCTGTCACCCGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000517831.5 |
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| CDS TCA 90 bp | TTCCTTCCAGTGAATAGGACCTCTTGCAGCTTCATAGTAATCTACTaGTGCGAGTCACTTTTCCTTCACTGCAAAGCATTAACCATCTCT | + |
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Preference number: 5 (lower is better) Translates to: FLPVNRTSCSFIVIY*CESLFLHCKALTIS Trigger: AGAGATGGTTAATGCTTTGCAGTGAAGGAAAAGTGACTCGCATCAGTAGATTACTATGAAGCTGCAAGAGGTCCTATTCACTGGAAGGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000517298.5 |
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| CDS GCA 90 bp | AGGAAAATTTCTCTGGTCTTCAATTCATCACAGTGGCTGCTGAGATaGTCAATGCCAAAGTCCACATTACATTTAAAGGCAGAAAACTCC | + |
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Preference number: 5 (lower is better) Translates to: RKISLVFNSSQWLLR*SMPKSTLHLKAENS Trigger: GGAGTTTTCTGCCTTTAAATGTAATGTGGACTTTGGCATTGAGCATCTCAGCAGCCACTGTGATGAATTGAAGACCAGAGAAATTTTCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000522631.1 |
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| CDS TCA 72 bp | AGTGGCAGAGTCAGCCGGGAGTCCGCGGCGGAGCGCTaGCCTCCGGTGCGGCGGTCTTCACTGTGCAGTCTC | + |
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Preference number: 6 (lower is better) Translates to: SGRVSRESAAER*PPVRRSSLCSL Trigger: GAGACTGCACAGTGAAGACCGCCGCACCGGAGGTCAGCGCTCCGCCGCGGACTCCCGGCTGACTCTGCCACT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000517298.5 ENST00000517831.5 |
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| CDS GCA 72 bp | TCAGCCGGGAGTCCGCGGCGGAGCGCTGACCTCCGGTaGGGCGGTCTTCACTGTGCAGTCTCAGAAGCACCT | + |
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Preference number: 6 (lower is better) Translates to: SAGSPRRSADLR*GGLHCAVSEAP Trigger: AGGTGCTTCTGAGACTGCACAGTGAAGACCGCCGCACCGGAGGTCAGCGCTCCGCCGCGGACTCCCGGCTGA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000517298.5 ENST00000517831.5 |
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| CDS CCA 72 bp | TGCACAAGTACCCACGCCAGCAAGGGGAGACTTGGCTaGCTCCATAACGCCCCAAACTCGCTTGAGCTGAGG | + |
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Preference number: 6 (lower is better) Translates to: CTSTHASKGRLG*LHNAPNSLELR Trigger: CCTCAGCTCAAGCGAGTTTGGGGCGTTATGGAGCCAGCCAAGTCTCCCCTTGCTGGCGTGGGTACTTGTGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000517298.5 ENST00000517831.5 |
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| CDS GCA 72 bp | CTGTGGTGGGCGGTGATTGCTCACCAGAAAAGCTGCTaGTTCACCCTCCGCTGTGCACAGGAGACTGCGAAA | + |
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Preference number: 6 (lower is better) Translates to: LWWAVIAHQKSC*FTLRCAQETAK Trigger: TTTCGCAGTCTCCTGTGCACAGCGGAGGGTGAAGCAGCAGCTTTTCTGGTGAGCAATCACCGCCCACCACAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000321764.4 |
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| CDS CAA 72 bp | GTTTCTGCACAAGTACCCACGCCAGCAAGGGGAGACTaGGCTGGCTCCATAACGCCCCAAACTCGCTTGAGC | + |
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Preference number: 6 (lower is better) Translates to: VSAQVPTPARGD*AGSITPQTRLS Trigger: GCTCAAGCGAGTTTGGGGCGTTATGGAGCCAGCCAAGTCTCCCCTTGCTGGCGTGGGTACTTGTGCAGAAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000517298.5 ENST00000517831.5 |
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| CDS GCA 72 bp | TCACTGTGCAGTCTCAGAAGCACCTCGGGAAGTTTCTaGACAAGTACCCACGCCAGCAAGGGGAGACTTGGC | + |
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Preference number: 6 (lower is better) Translates to: SLCSLRSTSGSF*TSTHASKGRLG Trigger: GCCAAGTCTCCCCTTGCTGGCGTGGGTACTTGTGCAGAAACTTCCCGAGGTGCTTCTGAGACTGCACAGTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000517298.5 ENST00000517831.5 |
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| CDS GCA 72 bp | GTGGTAGGGGGTGCCACAGGGATAGTCTCAAGCACTTaGAGAAAGCCCTTAACCGCCCTTTCCCCAGTAATT | + |
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Preference number: 6 (lower is better) Translates to: VVGGATGIVSST*RKPLTALSPVI Trigger: AATTACTGGGGAAAGGGCGGTTAAGGGCTTTCTGCAAGTGCTTGAGACTATCCCTGTGGCACCCCCTACCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000522631.1 |
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| CDS CAA 72 bp | TTTAAAGCACCCGGATCCTGCCGCAACCACCCCTACTaGGTGTCCAAAGGCAAGGAATTGTTGCCATCCGTG | + |
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Preference number: 6 (lower is better) Translates to: FKAPGSCRNHPY*VSKGKELLPSV Trigger: CACGGATGGCAACAATTCCTTGCCTTTGGACACCAAGTAGGGGTGGTTGCGGCAGGATCCGGGTGCTTTAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000517298.5 |
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| CDS CAA 72 bp | TGTGGTAGGGGGTGCCACAGGGATAGTCTCAAGCACTaGCAGAAAGCCCTTAACCGCCCTTTCCCCAGTAAT | + |
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Preference number: 6 (lower is better) Translates to: CGRGCHRDSLKH*QKALNRPFPSN Trigger: ATTACTGGGGAAAGGGCGGTTAAGGGCTTTCTGCAAGTGCTTGAGACTATCCCTGTGGCACCCCCTACCACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000522631.1 |
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| CDS GCA 72 bp | GTTCACCAATCTGAAGGTTTTAAAGCACCCGGATCCTaGCGCAACCACCCCTACTTGGTGTCCAAAGGCAAG | + |
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Preference number: 6 (lower is better) Translates to: VHQSEGFKAPGS*RNHPYLVSKGK Trigger: CTTGCCTTTGGACACCAAGTAGGGGTGGTTGCGGCAGGATCCGGGTGCTTTAAAACCTTCAGATTGGTGAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000517298.5 |
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| CDS CAA 90 bp | TCTGAAGGTTTTAAAGCACCCGGATCCTGCCGCAACCACCCCTACTaGGTGTCCAAAGGCAAGGAATTGTTGCCATCCGTGAAGCATTCT | + |
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Preference number: 6 (lower is better) Translates to: SEGFKAPGSCRNHPY*VSKGKELLPSVKHS Trigger: AGAATGCTTCACGGATGGCAACAATTCCTTGCCTTTGGACACCAAGTAGGGGTGGTTGCGGCAGGATCCGGGTGCTTTAAAACCTTCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000517298.5 |
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| CDS TCA 72 bp | AGTGAAGGTGAACCTGCCGTAACCTGTAGCTTCCAGTaGGAGGACCACCACGCAGAACTGATTTGTTCTCTG | + |
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Preference number: 6 (lower is better) Translates to: SEGEPAVTCSFQ*EDHHAELICSL Trigger: CAGAGAACAAATCAGTTCTGCGTGGTGGTCCTCTCACTGGAAGCTACAGGTTACGGCAGGTTCACCTTCACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000321764.4 ENST00000517298.5 |
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| CDS CAA 90 bp | TCCTGCCGCAACCACCCCTACTTGGTGTCCAAAGGCAAGGAATTGTaGCCATCCGTGAAGCATTCTCTGTTCATGAGTTACAACACATGG | + |
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Preference number: 6 (lower is better) Translates to: SCRNHPYLVSKGKEL*PSVKHSLFMSYNTW Trigger: CCATGTGTTGTAACTCATGAACAGAGAATGCTTCACGGATGGCAACAATTCCTTGCCTTTGGACACCAAGTAGGGGTGGTTGCGGCAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000517298.5 |
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| CDS CAA 90 bp | GGATCCTGCCGCAACCACCCCTACTTGGTGTCCAAAGGCAAGGAATaGTTGCCATCCGTGAAGCATTCTCTGTTCATGAGTTACAACACA | + |
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Preference number: 6 (lower is better) Translates to: GSCRNHPYLVSKGKE*LPSVKHSLFMSYNT Trigger: TGTGTTGTAACTCATGAACAGAGAATGCTTCACGGATGGCAACAATTCCTTGCCTTTGGACACCAAGTAGGGGTGGTTGCGGCAGGATCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000517298.5 |
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| CDS CAA 90 bp | CCACCACGCAGAACTGATTTGTTCTCTGTGTCATCAAAGTCAACATaGAAGGAATGGCCGCTGTTGCTGATGATTTTAGCTGAGCTTGGG | + |
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Preference number: 6 (lower is better) Translates to: PPRRTDLFSVSSKST*KEWPLLLMILAELG Trigger: CCCAAGCTCAGCTAAAATCATCAGCAACAGCGGCCATTCCTTCAATGTTGACTTTGATGACACAGAGAACAAATCAGTTCTGCGTGGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000321764.4 ENST00000517298.5 |
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| CDS TCA 72 bp | AAAAACACTCCCAAGACAGCCAGTCCATCTGGTTCATaGGCTGCCTCAACAAAGCTGGGGTATTTGTCTGAA | + |
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Preference number: 6 (lower is better) Translates to: KNTPKTASPSGS*AASTKLGYLSE Trigger: TTCAGACAAATACCCCAGCTTTGTTGAGGCAGCTCATGAACCAGATGGACTGGCTGTCTTGGGAGTGTTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000321764.4 ENST00000517298.5 |
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| CDS CAA 72 bp | AACCACCCCTACTTGGTGTCCAAAGGCAAGGAATTGTaGCCATCCGTGAAGCATTCTCTGTTCATGAGTTAC | + |
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Preference number: 6 (lower is better) Translates to: NHPYLVSKGKEL*PSVKHSLFMSY Trigger: GTAACTCATGAACAGAGAATGCTTCACGGATGGCAACAATTCCTTGCCTTTGGACACCAAGTAGGGGTGGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000517298.5 |
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| CDS TCA 72 bp | TTCATGAGCTGCCTCAACAAAGCTGGGGTATTTGTCTaGATTCCAGTGAACAACATGGAGCTCTGCAGCATA | + |
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Preference number: 6 (lower is better) Translates to: FMSCLNKAGVFV*IPVNNMELCSI Trigger: TATGCTGCAGAGCTCCATGTTGTTCACTGGAATTCAGACAAATACCCCAGCTTTGTTGAGGCAGCTCATGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000321764.4 ENST00000517298.5 |
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| CDS TCA 72 bp | TGTCTCTCCACAGCCATGTTTGGGGGAGTTCATTGGTaGCAATTTTTAATGGAAAGAGGCTCTCACTTTGCG | + |
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Preference number: 6 (lower is better) Translates to: CLSTAMFGGVHW*QFLMERGSHFA Trigger: CGCAAAGTGAGAGCCTCTTTCCATTAAAAATTGTCACCAATGAACTCCCCCAAACATGGCTGTGGAGAGACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000321764.4 |
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| CDS GCA 72 bp | GGCAGAAAACTCCATCCTTTCTGTGACATTTATTGGTaGAAGGATCTTATGCTATTGTTCCTAGGGCTGTGG | + |
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Preference number: 6 (lower is better) Translates to: GRKLHPFCDIYW*KDLMLLFLGLW Trigger: CCACAGCCCTAGGAACAATAGCATAAGATCCTTGCACCAATAAATGTCACAGAAAGGATGGAGTTTTCTGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000522631.1 |
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| CDS CCA 72 bp | CATTCTCTGTTCATGAGTTACAACACATGGAGAGTATaGGGTGTGACAAAGGGGCACACCTGTAAAAACACT | + |
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Preference number: 6 (lower is better) Translates to: HSLFMSYNTWRV*GVTKGHTCKNT Trigger: AGTGTTTTTACAGGTGTGCCCCTTTGTCACACCCCATACTCTCCATGTGTTGTAACTCATGAACAGAGAATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000517298.5 |
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| CDS TCA 72 bp | AGAGTGAGACCCTCTTGCAGCTTCATAGTAATCTACTaGTGCGAGTCACTTTTCCTTCACTGCAAAGCATTA | + |
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Preference number: 6 (lower is better) Translates to: RVRPSCSFIVIY*CESLFLHCKAL Trigger: TAATGCTTTGCAGTGAAGGAAAAGTGACTCGCATCAGTAGATTACTATGAAGCTGCAAGAGGGTCTCACTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000517831.5 |
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| CDS TCA 72 bp | TTTTCTGGGCCCTCTTGCAGCTTCATAGTAATCTACTaGTGCGAGTCACTTTTCCTTCACTGCAAAGCATTA | + |
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Preference number: 6 (lower is better) Translates to: FSGPSCSFIVIY*CESLFLHCKAL Trigger: TAATGCTTTGCAGTGAAGGAAAAGTGACTCGCATCAGTAGATTACTATGAAGCTGCAAGAGGGCCCAGAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000522631.1 |
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| CDS GCA 72 bp | TCTCTGGTCTTCAATTCATCACAGTGGCTGCTGAGATaGTCAATGCCAAAGTCCACATTACATTTAAAGGCA | + |
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Preference number: 6 (lower is better) Translates to: SLVFNSSQWLLR*SMPKSTLHLKA Trigger: TGCCTTTAAATGTAATGTGGACTTTGGCATTGAGCATCTCAGCAGCCACTGTGATGAATTGAAGACCAGAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000522631.1 |
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| CDS CAA 72 bp | CTGTTGCTGATGATTTTAGCTGAGCTTGGGTCATACTaGATACTAAGTGGTCGGAGGGAAGAGTCATATTTC | + |
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Preference number: 6 (lower is better) Translates to: LLLMILAELGSY*ILSGRREESYF Trigger: GAAATATGACTCTTCCCTCCGACCACTTAGTATCAAGTATGACCCAAGCTCAGCTAAAATCATCAGCAACAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000321764.4 ENST00000517298.5 |
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| CDS TCA 72 bp | GTGAATAGGACCTCTTGCAGCTTCATAGTAATCTACTaGTGCGAGTCACTTTTCCTTCACTGCAAAGCATTA | + |
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Preference number: 6 (lower is better) Translates to: VNRTSCSFIVIY*CESLFLHCKAL Trigger: TAATGCTTTGCAGTGAAGGAAAAGTGACTCGCATCAGTAGATTACTATGAAGCTGCAAGAGGTCCTATTCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000517298.5 |
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| CDS CCA 72 bp | AAAGGCAGAAAACTCCATCCTTTCTGTGACATTTATTaGTGCAAGGATCTTATGCTATTGTTCCTAGGGCTG | + |
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Preference number: 6 (lower is better) Translates to: KGRKLHPFCDIY*CKDLMLLFLGL Trigger: CAGCCCTAGGAACAATAGCATAAGATCCTTGCACCAATAAATGTCACAGAAAGGATGGAGTTTTCTGCCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000522631.1 |
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| CDS CCA 72 bp | AATAGGAAAATTTCTCTGGTCTTCAATTCATCACAGTaGCTGCTGAGATGCTCAATGCCAAAGTCCACATTA | + |
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Preference number: 6 (lower is better) Translates to: NRKISLVFNSSQ*LLRCSMPKSTL Trigger: TAATGTGGACTTTGGCATTGAGCATCTCAGCAGCCACTGTGATGAATTGAAGACCAGAGAAATTTTCCTATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000522631.1 |
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| CDS CAA 72 bp | CTACAAGAAGACGAAAAGTGTTCTTCTAGGTATATCTaGGCCATGCTAACAGTGACAGTGCTTTACAATAAT | + |
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Preference number: 6 (lower is better) Translates to: LQEDEKCSSRYI*AMLTVTVLYNN Trigger: ATTATTGTAAAGCACTGTCACTGTTAGCATGGCCAAGATATACCTAGAAGAACACTTTTCGTCTTCTTGTAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000518392.1 |
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| CDS CAA 90 bp | TTGTTTACCCTTTTCTTTAATGGAATCCAAAGTGTCAGTAATCTTTaGCAGTTGGGAATTAGGTTCACCAATCTGAAGGTTTTAAAGCAC | + |
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Preference number: 6 (lower is better) Translates to: LFTLFFNGIQSVSNL*QLGIRFTNLKVLKH Trigger: GTGCTTTAAAACCTTCAGATTGGTGAACCTAATTCCCAACTGCAAAAGATTACTGACACTTTGGATTCCATTAAAGAAAAGGGTAAACAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000517298.5 |
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