Pregenerated sensors for CA11 (Homo sapiens)
Ensembl gene IDs: ENSG00000063180Ensembl transcript IDs: ENST00000084798.9, ENST00000596080.1, ENST00000599267.1
Found 69 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | GACGGGCGGGTGCAATCCTCGAAGGGGAGTCTCAGCGACCATGGGGGACACCATCTTAGGACGGGCGGGTaGAATCCTCGAAGGGGAGTC | + |
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Preference number: 2 (lower is better) Translates to: DGRVQSSKGSLSDHGGHHLRTGG*NPRRGV Trigger: GACTCCCCTTCGAGGATTGCACCCGCCCGTCCTAAG...ATGGTGTCCCCCATGGTCGCTGAGACTCCCCTTCGAGGATTGCACCCGCCCGTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000596080.1 |
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| 3UTR-3UTR GCA 90 bp | CCCACCGCGCCTAGAATCAGACCACTGAGAAAACAGGAAGTATTCTGTCCCTTTCTTAGGACGGGCGGGTaGAATCCTCGAAGGGGAGTC | + |
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Preference number: 2 (lower is better) Translates to: PTAPRIRPLRKQEVFCPFLRTGG*NPRRGV Trigger: GACTCCCCTTCGAGGATTGCACCCGCCCGTCCTAAG...AAAGGGACAGAATACTTCCTGTTTTCTCAGTGGTCTGATTCTAGGCGCGGTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000084798.9 |
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| 3UTR-3UTR CCA 90 bp | AAATGTTTCCCCACCGCGCCTAGAATCAGACCACTGAGAAAACAGGAAGTATTCACTCCCCTCGCCTTGTaGGGAGGCTTAGGACGGGCG | + |
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Preference number: 2 (lower is better) Translates to: KCFPTAPRIRPLRKQEVFTPLAL*GGLGRA Trigger: CGCCCGTCCTAAGCCTCCCCACAAGGCGAGGGGAGT...GAATACTTCCTGTTTTCTCAGTGGTCTGATTCTAGGCGCGGTGGGGAAACATTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000084798.9 |
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| 3UTR CCA 72 bp | GCGGGTGCAATCCTCGAAGGGGAGTCTCAGCGACCATaGGGGACACCATCCACGTCGGAAGTCTGCGAGCGG | + |
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Preference number: 3 (lower is better) Translates to: AGAILEGESQRP*GTPSTSEVCER Trigger: CCGCTCGCAGACTTCCGACGTGGATGGTGTCCCCCATGGTCGCTGAGACTCCCCTTCGAGGATTGCACCCGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000596080.1 |
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| 3UTR-3UTR CAA 90 bp | AGACCACTGAGAAAACAGGAAGTATTCTGTCCCTTTAATAGCTTTGTTTTAGGGGTAACTCCCCTCGCCTaGTGGGGAGGCTTAGGACGG | + |
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Preference number: 3 (lower is better) Translates to: RPLRKQEVFCPFNSFVLGVTPLA*WGGLGR Trigger: CCGTCCTAAGCCTCCCCACAAGGCGAGGGGAGTTAC...CCCTAAAACAAAGCTATTAAAGGGACAGAATACTTCCTGTTTTCTCAGTGGTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt. Matches the following 1 transcripts: ENST00000084798.9 |
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| 3UTR TCA 72 bp | CCAAATGTTTCCCCACCGCGCCTAGAATCAGACCACTaGGAAAACAGGAAGTATTCTGTCCCTTTAATAGCT | + |
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Preference number: 3 (lower is better) Translates to: PNVSPPRLESDH*ENRKYSVPLIA Trigger: AGCTATTAAAGGGACAGAATACTTCCTGTTTTCTCAGTGGTCTGATTCTAGGCGCGGTGGGGAAACATTTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000084798.9 |
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| CDS-3UTR GCA 90 bp | GGAGGCTTAGGACGGGCGGGTGCAATCCTCGAAGGGGAGTCTCAGCGACCATGGGCCGGGGGTCCCTGTTaGCCCTCAGTGCCCTGTGGG | + |
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Preference number: 4 (lower is better) Translates to: GGLGRAGAILEGESQRPWAGGPC*PSVPCG Trigger: CCCACAGGGCACTGAGGGGCAACAGGGACCCCCGGC...CCATGGTCGCTGAGACTCCCCTTCGAGGATTGCACCCGCCCGTCCTAAGCCTCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000596080.1 |
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| CDS-3UTR GCA 90 bp | GGAGGCTTAGGACGGGCGGGTGCAATCCTCGAAGGGGAGTCTCAGCGACCATGGCTGTGGGCCAAGGGCTaGAGGGGCCGGCTGTTACCG | + |
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Preference number: 4 (lower is better) Translates to: GGLGRAGAILEGESQRPWLWAKG*RGRLLP Trigger: CGGTAACAGCCGGCCCCTGCAGCCCTTGGCCCACAG...CCATGGTCGCTGAGACTCCCCTTCGAGGATTGCACCCGCCCGTCCTAAGCCTCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000596080.1 |
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| CDS-3UTR CCA 90 bp | AGGACGGGCGGGTGCAATCCTCGAAGGGGAGTCTCAGCGACCATGGGGGACACCACTCCCCTCGCCTTGTaGGGAGGCTTAGGACGGGCG | + |
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Preference number: 4 (lower is better) Translates to: RTGGCNPRRGVSATMGDTTPLAL*GGLGRA Trigger: CGCCCGTCCTAAGCCTCCCCACAAGGCGAGGGGAGT...GGTGTCCCCCATGGTCGCTGAGACTCCCCTTCGAGGATTGCACCCGCCCGTCCT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000596080.1 |
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| CDS-3UTR CCA 90 bp | GGGCGGGTGCAATCCTCGAAGGGGAGTCTCAGCGACCATGGGGGACACCATCCACATGCAGGCGGTAGTTaGGGCCTCGGCAGCGCCTCT | + |
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Preference number: 4 (lower is better) Translates to: GRVQSSKGSLSDHGGHHPHAGGS*GLGSAS Trigger: AGAGGCGCTGCCGAGGCCCCAACTACCGCCTGCATG...TGGATGGTGTCCCCCATGGTCGCTGAGACTCCCCTTCGAGGATTGCACCCGCCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000596080.1 |
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| CDS-3UTR TCA 90 bp | CTCGAAGGGGAGTCTCAGCGACCATGGGGGACACCATCCACGTCGGAAGTCTGCGCCGGCTGTTACCGCTaGGGCTCTGGAAGATCTGAG | + |
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Preference number: 4 (lower is better) Translates to: LEGESQRPWGTPSTSEVCAGCYR*GSGRSE Trigger: CTCAGATCTTCCAGAGCCTCAGCGGTAACAGCCGGC...GCAGACTTCCGACGTGGATGGTGTCCCCCATGGTCGCTGAGACTCCCCTTCGAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000596080.1 |
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| CDS-3UTR GCA 90 bp | GGGAGGCTTAGGACGGGCGGGTGCAATCCTCGAAGGGGAGTCTCAGCGACCATGTCCACGTCGGAAGTCTaGGAGCGGGGAACCAGAATG | + |
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Preference number: 4 (lower is better) Translates to: GRLRTGGCNPRRGVSATMSTSEV*ERGTRM Trigger: CATTCTGGTTCCCCGCTCGCAGACTTCCGACGTGGA...CATGGTCGCTGAGACTCCCCTTCGAGGATTGCACCCGCCCGTCCTAAGCCTCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000596080.1 |
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| CDS-3UTR CCA 90 bp | CTCGAAGGGGAGTCTCAGCGACCATGGGGGACACCATCCACGTCGGAAGTCTGCGAGTCTCAGCGACCATaGGGGACACCATCCACGTCG | + |
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Preference number: 4 (lower is better) Translates to: LEGESQRPWGTPSTSEVCESQRP*GTPSTS Trigger: CGACGTGGATGGTGTCCCCCATGGTCGCTGAGACTC...GCAGACTTCCGACGTGGATGGTGTCCCCCATGGTCGCTGAGACTCCCCTTCGAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000596080.1 |
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| CDS-3UTR TCA 90 bp | GGGAGTCTCAGCGACCATGGGGGACACCATCCACGTCGGAAGTCTGCGAGCGGGCTCAGGGAGTGCATCTaGAGGGAGGTGATATTGAGG | + |
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Preference number: 4 (lower is better) Translates to: GSLSDHGGHHPRRKSASGLRECI*REVILR Trigger: CCTCAATATCACCTCCCTTCAGATGCACTCCCTGAG...CCCGCTCGCAGACTTCCGACGTGGATGGTGTCCCCCATGGTCGCTGAGACTCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000596080.1 |
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| CDS-3UTR GCA 90 bp | TGCAATCCTCGAAGGGGAGTCTCAGCGACCATGGGGGACACCATCCACGTCGGACTTAGGACGGGCGGGTaGAATCCTCGAAGGGGAGTC | + |
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Preference number: 4 (lower is better) Translates to: CNPRRGVSATMGDTIHVGLRTGG*NPRRGV Trigger: GACTCCCCTTCGAGGATTGCACCCGCCCGTCCTAAG...TCCGACGTGGATGGTGTCCCCCATGGTCGCTGAGACTCCCCTTCGAGGATTGCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000596080.1 |
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| CDS-3UTR TCA 90 bp | GCGACCATGGGGGACACCATCCACGTCGGAAGTCTGCGAGCGGGGAACCAGAATAGGCTCTGGAAGATCTaGGATGGAGGATTCTGGCTC | + |
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Preference number: 4 (lower is better) Translates to: ATMGDTIHVGSLRAGNQNRLWKI*DGGFWL Trigger: GAGCCAGAATCCTCCATCTCAGATCTTCCAGAGCCT...ATTCTGGTTCCCCGCTCGCAGACTTCCGACGTGGATGGTGTCCCCCATGGTCGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000596080.1 |
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| CDS-3UTR GCA 90 bp | CCCACCGCGCCTAGAATCAGACCACTGAGAAAACAGGAAGTATTCTGTCCCTTTGCCGGGGGTCCCTGTTaGCCCTCAGTGCCCTGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: PTAPRIRPLRKQEVFCPFAGGPC*PSVPCG Trigger: CCCACAGGGCACTGAGGGGCAACAGGGACCCCCGGC...AAAGGGACAGAATACTTCCTGTTTTCTCAGTGGTCTGATTCTAGGCGCGGTGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000084798.9 |
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| CDS-3UTR GCA 90 bp | CCCAAATGTTTCCCCACCGCGCCTAGAATCAGACCACTGAGAAAACAGGAAGTACCCTGCCCAACGCCCTaGCCCCCTCTCTCAGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: PKCFPTAPRIRPLRKQEVPCPTP*PPLSAP Trigger: AGGAGCTGAGAGAGGGGGGCAGGGCGTTGGGCAGGG...TACTTCCTGTTTTCTCAGTGGTCTGATTCTAGGCGCGGTGGGGAAACATTTGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000084798.9 |
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| CDS-3UTR GCA 90 bp | CCCAAATGTTTCCCCACCGCGCCTAGAATCAGACCACTGAGAAAACAGGAAGTAGGCGCTCAGACGAGCTaGAGCCCCCATCCCCAGGAG | + |
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Preference number: 4 (lower is better) Translates to: PKCFPTAPRIRPLRKQEVGAQTS*SPHPQE Trigger: CTCCTGGGGATGGGGGCTGCAGCTCGTCTGAGCGCC...TACTTCCTGTTTTCTCAGTGGTCTGATTCTAGGCGCGGTGGGGAAACATTTGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000084798.9 |
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| CDS-3UTR CCA 90 bp | CTCGAAGGGGAGTCTCAGCGACCATGGGGGACACCATCCACGTCGGAAGTCTGCCTGGAAGATCTGAGATaGAGGATTCTGGCTCAGGAG | + |
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Preference number: 4 (lower is better) Translates to: LEGESQRPWGTPSTSEVCLEDLR*RILAQE Trigger: CTCCTGAGCCAGAATCCTCCATCTCAGATCTTCCAG...GCAGACTTCCGACGTGGATGGTGTCCCCCATGGTCGCTGAGACTCCCCTTCGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000596080.1 |
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| CDS-3UTR GCA 90 bp | CCCAAATGTTTCCCCACCGCGCCTAGAATCAGACCACTGAGAAAACAGGAAGTACGGCCTCCAGCTTCGTaGTCTCCCCACCTCCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: PKCFPTAPRIRPLRKQEVRPPAS*SPHLLL Trigger: GAGGAGGAGGTGGGGAGAGCACGAAGCTGGAGGCCG...TACTTCCTGTTTTCTCAGTGGTCTGATTCTAGGCGCGGTGGGGAAACATTTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000084798.9 |
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| CDS-3UTR CCA 90 bp | AAATGTTTCCCCACCGCGCCTAGAATCAGACCACTGAGAAAACAGGAAGTATTCGAATGGCCAGGCCATTaGGGCCGCGGGAGGCAGCGC | + |
|
Preference number: 4 (lower is better) Translates to: KCFPTAPRIRPLRKQEVFEWPGH*GRGRQR Trigger: GCGCTGCCTCCCGCGGCCCCAATGGCCTGGCCATTC...GAATACTTCCTGTTTTCTCAGTGGTCTGATTCTAGGCGCGGTGGGGAAACATTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000084798.9 |
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| CDS-3UTR CCA 90 bp | CCCACCGCGCCTAGAATCAGACCACTGAGAAAACAGGAAGTATTCTGTCCCTTTCATGCAGGCGGTAGTTaGGGCCTCGGCAGCGCCTCT | + |
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Preference number: 4 (lower is better) Translates to: PTAPRIRPLRKQEVFCPFHAGGS*GLGSAS Trigger: AGAGGCGCTGCCGAGGCCCCAACTACCGCCTGCATG...AAAGGGACAGAATACTTCCTGTTTTCTCAGTGGTCTGATTCTAGGCGCGGTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000084798.9 |
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| CDS-3UTR TCA 90 bp | TTCCCCACCGCGCCTAGAATCAGACCACTGAGAAAACAGGAAGTATTCTGTCCCGCCGGCTGTTACCGCTaGGGCTCTGGAAGATCTGAG | + |
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Preference number: 4 (lower is better) Translates to: FPTAPRIRPLRKQEVFCPAGCYR*GSGRSE Trigger: CTCAGATCTTCCAGAGCCTCAGCGGTAACAGCCGGC...GGGACAGAATACTTCCTGTTTTCTCAGTGGTCTGATTCTAGGCGCGGTGGGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000084798.9 |
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| CDS-3UTR GCA 90 bp | CCCACCGCGCCTAGAATCAGACCACTGAGAAAACAGGAAGTATTCTGTCCCTTTCTCCTCTCAGCCTTCTaGTGCCCCCAGGGCTACCTC | + |
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Preference number: 4 (lower is better) Translates to: PTAPRIRPLRKQEVFCPFLLSAF*CPQGYL Trigger: GAGGTAGCCCTGGGGGCAGCAGAAGGCTGAGAGGAG...AAAGGGACAGAATACTTCCTGTTTTCTCAGTGGTCTGATTCTAGGCGCGGTGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000084798.9 |
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| CDS-3UTR CCA 90 bp | GTCTGTTCTTTAATACCCAAATGTTTCCCCACCGCGCCTAGAATCAGACCACTGACTCCCCTCGCCTTGTaGGGAGGCTTAGGACGGGCG | + |
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Preference number: 4 (lower is better) Translates to: VCSLIPKCFPTAPRIRPLTPLAL*GGLGRA Trigger: CGCCCGTCCTAAGCCTCCCCACAAGGCGAGGGGAGT...CAGTGGTCTGATTCTAGGCGCGGTGGGGAAACATTTGGGTATTAAAGAACAGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000084798.9 |
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| CDS-3UTR TCA 90 bp | CCCAAATGTTTCCCCACCGCGCCTAGAATCAGACCACTGAGAAAACAGGAAGTAGACCTCCAGACACATTaGCCACAGGTCGGGGTGCAG | + |
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Preference number: 4 (lower is better) Translates to: PKCFPTAPRIRPLRKQEVDLQTH*PQVGVQ Trigger: CTGCACCCCGACCTGTGGTCAATGTGTCTGGAGGTC...TACTTCCTGTTTTCTCAGTGGTCTGATTCTAGGCGCGGTGGGGAAACATTTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000084798.9 |
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| CDS-3UTR GCA 90 bp | GCGCCTAGAATCAGACCACTGAGAAAACAGGAAGTATTCTGTCCCTTTAATAGCCTGTGGGCCAAGGGCTaGAGGGGCCGGCTGTTACCG | + |
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Preference number: 4 (lower is better) Translates to: APRIRPLRKQEVFCPFNSLWAKG*RGRLLP Trigger: CGGTAACAGCCGGCCCCTGCAGCCCTTGGCCCACAG...GCTATTAAAGGGACAGAATACTTCCTGTTTTCTCAGTGGTCTGATTCTAGGCGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000084798.9 |
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| CDS-3UTR CCA 90 bp | GTCTGTTCTTTAATACCCAAATGTTTCCCCACCGCGCCTAGAATCAGACCACTGCTCGGGGTCAGGTGCTaGTCCGATGTGAGCTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: VCSLIPKCFPTAPRIRPLLGVRC*SDVSCC Trigger: GCAGCAGCTCACATCGGACCAGCACCTGACCCCGAG...CAGTGGTCTGATTCTAGGCGCGGTGGGGAAACATTTGGGTATTAAAGAACAGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000084798.9 |
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| CDS-3UTR CCA 90 bp | TTCCCCACCGCGCCTAGAATCAGACCACTGAGAAAACAGGAAGTATTCTGTCCCCCAGAAAGGAGGCCCTaGCACGAAGTTTCCCTGGAG | + |
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Preference number: 4 (lower is better) Translates to: FPTAPRIRPLRKQEVFCPPERRP*HEVSLE Trigger: CTCCAGGGAAACTTCGTGCCAGGGCCTCCTTTCTGG...GGGACAGAATACTTCCTGTTTTCTCAGTGGTCTGATTCTAGGCGCGGTGGGGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000084798.9 |
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| CDS-3UTR TCA 90 bp | CCCAAATGTTTCCCCACCGCGCCTAGAATCAGACCACTGAGAAAACAGGAAGTAAAAGCAGCCAGGGACTaGGATCCGCCCTTCAAACCC | + |
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Preference number: 4 (lower is better) Translates to: PKCFPTAPRIRPLRKQEVKAARD*DPPFKP Trigger: GGGTTTGAAGGGCGGATCTCAGTCCCTGGCTGCTTT...TACTTCCTGTTTTCTCAGTGGTCTGATTCTAGGCGCGGTGGGGAAACATTTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000084798.9 |
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| CDS-3UTR TCA 90 bp | TTCCCCACCGCGCCTAGAATCAGACCACTGAGAAAACAGGAAGTATTCTGTCCCTCTCTCCTCCAGTGCTaGGCCTTAATGGGGGCAGAA | + |
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Preference number: 4 (lower is better) Translates to: FPTAPRIRPLRKQEVFCPSLLQC*ALMGAE Trigger: TTCTGCCCCCATTAAGGCTCAGCACTGGAGGAGAGA...GGGACAGAATACTTCCTGTTTTCTCAGTGGTCTGATTCTAGGCGCGGTGGGGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000084798.9 |
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| CDS-3UTR TCA 90 bp | CCCACCGCGCCTAGAATCAGACCACTGAGAAAACAGGAAGTATTCTGTCCCTTTGCAGCCGCAGTTCACTaGGTCGGTGGCTGTAAAGGA | + |
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Preference number: 4 (lower is better) Translates to: PTAPRIRPLRKQEVFCPFAAAVH*VGGCKG Trigger: TCCTTTACAGCCACCGACTCAGTGAACTGCGGCTGC...AAAGGGACAGAATACTTCCTGTTTTCTCAGTGGTCTGATTCTAGGCGCGGTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000084798.9 |
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| CDS-3UTR TCA 90 bp | AAATGTTTCCCCACCGCGCCTAGAATCAGACCACTGAGAAAACAGGAAGTATTCCCCTGGTGGTTGATCTaGTGTTCCGAGCCGGCTCCG | + |
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Preference number: 4 (lower is better) Translates to: KCFPTAPRIRPLRKQEVFPWWLI*CSEPAP Trigger: CGGAGCCGGCTCGGAACATCAGATCAACCACCAGGG...GAATACTTCCTGTTTTCTCAGTGGTCTGATTCTAGGCGCGGTGGGGAAACATTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000084798.9 |
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| CDS-3UTR GCA 90 bp | GAAGTCTGTTCTTTAATACCCAAATGTTTCCCCACCGCGCCTAGAATCAGACCAGTCCTCGGGGTCAGGTaGTGGTCCGATGTGAGCTGC | + |
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Preference number: 4 (lower is better) Translates to: EVCSLIPKCFPTAPRIRPVLGVR*WSDVSC Trigger: GCAGCTCACATCGGACCAGCACCTGACCCCGAGGAC...TGGTCTGATTCTAGGCGCGGTGGGGAAACATTTGGGTATTAAAGAACAGACTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000084798.9 |
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| CDS-3UTR GCA 90 bp | AAATGTTTCCCCACCGCGCCTAGAATCAGACCACTGAGAAAACAGGAAGTATTCACATCCACGGGGCTCTaGCGCTTCCCCACAGCACAC | + |
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Preference number: 4 (lower is better) Translates to: KCFPTAPRIRPLRKQEVFTSTGL*RFPTAH Trigger: GTGTGCTGTGGGGAAGCGGCAGAGCCCCGTGGATGT...GAATACTTCCTGTTTTCTCAGTGGTCTGATTCTAGGCGCGGTGGGGAAACATTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000084798.9 |
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| CDS-3UTR CCA 90 bp | CCCACCGCGCCTAGAATCAGACCACTGAGAAAACAGGAAGTATTCTGTCCCTTTCCCAGGGCTACCTCTTaGTTCCTAACCCACACCTCC | + |
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Preference number: 4 (lower is better) Translates to: PTAPRIRPLRKQEVFCPFPRATS*FLTHTS Trigger: GGAGGTGTGGGTTAGGAACCAAGAGGTAGCCCTGGG...AAAGGGACAGAATACTTCCTGTTTTCTCAGTGGTCTGATTCTAGGCGCGGTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000084798.9 |
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| CDS-3UTR GCA 90 bp | CCCAAATGTTTCCCCACCGCGCCTAGAATCAGACCACTGAGAAAACAGGAAGTAACACAGACTCCACGCTaGATTCACCAGGCCCCAGAA | + |
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Preference number: 4 (lower is better) Translates to: PKCFPTAPRIRPLRKQEVTQTPR*IHQAPE Trigger: TTCTGGGGCCTGGTGAATGCAGCGTGGAGTCTGTGT...TACTTCCTGTTTTCTCAGTGGTCTGATTCTAGGCGCGGTGGGGAAACATTTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000084798.9 |
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| CDS-3UTR TCA 90 bp | CCCACCGCGCCTAGAATCAGACCACTGAGAAAACAGGAAGTATTCTGTCCCTTTCTCAGGGAGTGCATCTaGAGGGAGGTGATATTGAGG | + |
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Preference number: 4 (lower is better) Translates to: PTAPRIRPLRKQEVFCPFLRECI*REVILR Trigger: CCTCAATATCACCTCCCTTCAGATGCACTCCCTGAG...AAAGGGACAGAATACTTCCTGTTTTCTCAGTGGTCTGATTCTAGGCGCGGTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000084798.9 |
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| CDS-3UTR TCA 90 bp | CCCACCGCGCCTAGAATCAGACCACTGAGAAAACAGGAAGTATTCTGTCCCTTTAGGCTCTGGAAGATCTaGGATGGAGGATTCTGGCTC | + |
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Preference number: 4 (lower is better) Translates to: PTAPRIRPLRKQEVFCPFRLWKI*DGGFWL Trigger: GAGCCAGAATCCTCCATCTCAGATCTTCCAGAGCCT...AAAGGGACAGAATACTTCCTGTTTTCTCAGTGGTCTGATTCTAGGCGCGGTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000084798.9 |
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| CDS-3UTR GCA 90 bp | GCGCCTAGAATCAGACCACTGAGAAAACAGGAAGTATTCTGTCCCTTTAATAGCCTTAGGACGGGCGGGTaGAATCCTCGAAGGGGAGTC | + |
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Preference number: 4 (lower is better) Translates to: APRIRPLRKQEVFCPFNSLRTGG*NPRRGV Trigger: GACTCCCCTTCGAGGATTGCACCCGCCCGTCCTAAG...GCTATTAAAGGGACAGAATACTTCCTGTTTTCTCAGTGGTCTGATTCTAGGCGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000084798.9 |
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| CDS-3UTR CCA 90 bp | AAATGTTTCCCCACCGCGCCTAGAATCAGACCACTGAGAAAACAGGAAGTATTCGAGTCTCAGCGACCATaGGGGACACCATCCACATGC | + |
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Preference number: 4 (lower is better) Translates to: KCFPTAPRIRPLRKQEVFESQRP*GTPSTC Trigger: GCATGTGGATGGTGTCCCCCATGGTCGCTGAGACTC...GAATACTTCCTGTTTTCTCAGTGGTCTGATTCTAGGCGCGGTGGGGAAACATTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000084798.9 |
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| CDS-3UTR GCA 90 bp | AGACCACTGAGAAAACAGGAAGTATTCTGTCCCTTTAATAGCTTTGTTTTAGGGTCCGATGTGAGCTGCTaGCCCCAGTGCAGCCCAGAG | + |
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Preference number: 4 (lower is better) Translates to: RPLRKQEVFCPFNSFVLGSDVSC*PQCSPE Trigger: CTCTGGGCTGCACTGGGGGCAGCAGCTCACATCGGA...CCCTAAAACAAAGCTATTAAAGGGACAGAATACTTCCTGTTTTCTCAGTGGTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000084798.9 |
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| CDS-3UTR CCA 90 bp | AAATGTTTCCCCACCGCGCCTAGAATCAGACCACTGAGAAAACAGGAAGTATTCGAGGCGACTGAGGAATaGGTTAGAGGTACTGGCAAC | + |
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Preference number: 4 (lower is better) Translates to: KCFPTAPRIRPLRKQEVFEATEE*VRGTGN Trigger: GTTGCCAGTACCTCTAACCCATTCCTCAGTCGCCTC...GAATACTTCCTGTTTTCTCAGTGGTCTGATTCTAGGCGCGGTGGGGAAACATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000084798.9 |
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| CDS-3UTR TCA 90 bp | AGACCACTGAGAAAACAGGAAGTATTCTGTCCCTTTAATAGCTTTGTTTTAGGGCGCGGGAGGCAGCGCTaGAATTCCCGTAGAGTTCCT | + |
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Preference number: 4 (lower is better) Translates to: RPLRKQEVFCPFNSFVLGRGRQR*NSRRVP Trigger: AGGAACTCTACGGGAATTTCAGCGCTGCCTCCCGCG...CCCTAAAACAAAGCTATTAAAGGGACAGAATACTTCCTGTTTTCTCAGTGGTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000084798.9 |
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| CDS-3UTR TCA 90 bp | AGACCACTGAGAAAACAGGAAGTATTCTGTCCCTTTAATAGCTTTGTTTTAGGGAGAAGCCCTGGTGGTTaGTCTGATGTTCCGAGCCGG | + |
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Preference number: 4 (lower is better) Translates to: RPLRKQEVFCPFNSFVLGRSPGG*SDVPSR Trigger: CCGGCTCGGAACATCAGATCAACCACCAGGGCTTCT...CCCTAAAACAAAGCTATTAAAGGGACAGAATACTTCCTGTTTTCTCAGTGGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000084798.9 |
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| CDS-3UTR TCA 90 bp | GCGCCTAGAATCAGACCACTGAGAAAACAGGAAGTATTCTGTCCCTTTAATAGCAGTTCCTGGTTGAAGTaGATGAGCTGCACCTCAGCA | + |
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Preference number: 4 (lower is better) Translates to: APRIRPLRKQEVFCPFNSSSWLK*MSCTSA Trigger: TGCTGAGGTGCAGCTCATTCACTTCAACCAGGAACT...GCTATTAAAGGGACAGAATACTTCCTGTTTTCTCAGTGGTCTGATTCTAGGCGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000084798.9 |
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| CDS-3UTR CCA 90 bp | GCGCCTAGAATCAGACCACTGAGAAAACAGGAAGTATTCTGTCCCTTTAATAGCCTGGAAGATCTGAGATaGAGGATTCTGGCTCAGGAG | + |
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Preference number: 4 (lower is better) Translates to: APRIRPLRKQEVFCPFNSLEDLR*RILAQE Trigger: CTCCTGAGCCAGAATCCTCCATCTCAGATCTTCCAG...GCTATTAAAGGGACAGAATACTTCCTGTTTTCTCAGTGGTCTGATTCTAGGCGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000084798.9 |
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| CDS-3UTR TCA 90 bp | GTCTGTTCTTTAATACCCAAATGTTTCCCCACCGCGCCTAGAATCAGACCACTGCTAGAATCAGACCACTaGGAAAACAGGAAGTATTCT | + |
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Preference number: 4 (lower is better) Translates to: VCSLIPKCFPTAPRIRPLLESDH*ENRKYS Trigger: AGAATACTTCCTGTTTTCTCAGTGGTCTGATTCTAG...CAGTGGTCTGATTCTAGGCGCGGTGGGGAAACATTTGGGTATTAAAGAACAGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000084798.9 |
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| CDS-3UTR CAA 90 bp | GCGACCATGGGGGACACCATCCACGTCGGAAGTCTGCGAGCGGGGAACCAGAATGTAACTCCCCTCGCCTaGTGGGGAGGCTTAGGACGG | + |
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Preference number: 5 (lower is better) Translates to: ATMGDTIHVGSLRAGNQNVTPLA*WGGLGR Trigger: CCGTCCTAAGCCTCCCCACAAGGCGAGGGGAGTTAC...ATTCTGGTTCCCCGCTCGCAGACTTCCGACGTGGATGGTGTCCCCCATGGTCGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000596080.1 |
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| CDS GCA 90 bp | GCTGTAAAGGAGGGGACCTCCAGACACATTGACCACAGGTCGGGGTaGAGGCAGGAAGGAGACATGTCGGCCGGTGTTGTACAAGGTTCC | + |
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Preference number: 5 (lower is better) Translates to: AVKEGTSRHIDHRSG*RQEGDMSAGVVQGS Trigger: GGAACCTTGTACAACACCGGCCGACATGTCTCCTTCCTGCCTGCACCCCGACCTGTGGTCAATGTGTCTGGAGGTCCCCTCCTTTACAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000084798.9 |
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| CDS-3UTR CAA 90 bp | TTCCCCACCGCGCCTAGAATCAGACCACTGAGAAAACAGGAAGTATTCTGTCCCCCCCAGGGCTACCTCTaGGTTCCTAACCCACACCTC | + |
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Preference number: 5 (lower is better) Translates to: FPTAPRIRPLRKQEVFCPPQGYL*VPNPHL Trigger: GAGGTGTGGGTTAGGAACCAAGAGGTAGCCCTGGGG...GGGACAGAATACTTCCTGTTTTCTCAGTGGTCTGATTCTAGGCGCGGTGGGGAA 56% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENST00000084798.9 |
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| CDS-3UTR CAA 90 bp | AAATGTTTCCCCACCGCGCCTAGAATCAGACCACTGAGAAAACAGGAAGTATTCGTAACTCCCCTCGCCTaGTGGGGAGGCTTAGGACGG | + |
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Preference number: 5 (lower is better) Translates to: KCFPTAPRIRPLRKQEVFVTPLA*WGGLGR Trigger: CCGTCCTAAGCCTCCCCACAAGGCGAGGGGAGTTAC...GAATACTTCCTGTTTTCTCAGTGGTCTGATTCTAGGCGCGGTGGGGAAACATTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000084798.9 |
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| CDS-3UTR CAA 90 bp | GCGCCTAGAATCAGACCACTGAGAAAACAGGAAGTATTCTGTCCCTTTAATAGCGGACCTCCAGACACATaGACCACAGGTCGGGGTGCA | + |
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Preference number: 5 (lower is better) Translates to: APRIRPLRKQEVFCPFNSGPPDT*TTGRGA Trigger: TGCACCCCGACCTGTGGTCAATGTGTCTGGAGGTCC...GCTATTAAAGGGACAGAATACTTCCTGTTTTCTCAGTGGTCTGATTCTAGGCGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000084798.9 |
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| CDS-3UTR CAA 90 bp | AGACCACTGAGAAAACAGGAAGTATTCTGTCCCTTTAATAGCTTTGTTTTAGGGACATGTCGGCCGGTGTaGTACAAGGTTCCCCGGAGC | + |
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Preference number: 5 (lower is better) Translates to: RPLRKQEVFCPFNSFVLGTCRPV*YKVPRS Trigger: GCTCCGGGGAACCTTGTACAACACCGGCCGACATGT...CCCTAAAACAAAGCTATTAAAGGGACAGAATACTTCCTGTTTTCTCAGTGGTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000084798.9 |
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| CDS-3UTR CAA 90 bp | AAATGTTTCCCCACCGCGCCTAGAATCAGACCACTGAGAAAACAGGAAGTATTCGAGGTACTGGCAACGTaGACAAAGAGGCTGAGAATG | + |
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Preference number: 5 (lower is better) Translates to: KCFPTAPRIRPLRKQEVFEVLAT*TKRLRM Trigger: CATTCTCAGCCTCTTTGTCAACGTTGCCAGTACCTC...GAATACTTCCTGTTTTCTCAGTGGTCTGATTCTAGGCGCGGTGGGGAAACATTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000084798.9 |
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| CDS-3UTR CAA 90 bp | GAAGTCTGTTCTTTAATACCCAAATGTTTCCCCACCGCGCCTAGAATCAGACCACTCCAGGCTCAGGTCTaGAAGAAAGTAGGCATCATT | + |
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Preference number: 5 (lower is better) Translates to: EVCSLIPKCFPTAPRIRPLQAQV*KKVGII Trigger: AATGATGCCTACTTTCTTCAAGACCTGAGCCTGGAG...TGGTCTGATTCTAGGCGCGGTGGGGAAACATTTGGGTATTAAAGAACAGACTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000084798.9 |
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| CDS GCA 72 bp | CTCGGCAGCGCCTCTCGGGGTGCCGGGGGTCCCTGTTaGCCCTCAGTGCCCTGTGGGCCAAGGGCTGCAGGG | + |
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Preference number: 6 (lower is better) Translates to: LGSASRGAGGPC*PSVPCGPRAAG Trigger: CCCTGCAGCCCTTGGCCCACAGGGCACTGAGGGGCAACAGGGACCCCCGGCACCCCGAGAGGCGCTGCCGAG 75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000084798.9 ENST00000596080.1 ENST00000599267.1 |
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| CDS CCA 72 bp | ACTAGGTCGAGAAGCACTGGGCATGCAGGCGGTAGTTaGGGCCTCGGCAGCGCCTCTCGGGGTGCCGGGGGT | + |
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Preference number: 6 (lower is better) Translates to: TRSRSTGHAGGS*GLGSASRGAGG Trigger: ACCCCCGGCACCCCGAGAGGCGCTGCCGAGGCCCCAACTACCGCCTGCATGCCCAGTGCTTCTCGACCTAGT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000596080.1 |
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| CDS GCA 72 bp | GCTCTGCCGCTTCCCCACAGCACACAGACTCCACGCTaGATTCACCAGGCCCCAGAAAGGAGGCCCTGGCAC | + |
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Preference number: 6 (lower is better) Translates to: ALPLPHSTQTPR*IHQAPERRPWH Trigger: GTGCCAGGGCCTCCTTTCTGGGGCCTGGTGAATGCAGCGTGGAGTCTGTGTGCTGTGGGGAAGCGGCAGAGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000084798.9 |
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| CDS CCA 72 bp | ATCCTTGTAGCTCCACCAGTCCTCGGGGTCAGGTGCTaGTCCGATGTGAGCTGCTGCCCCCAGTGCAGCCCA | + |
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Preference number: 6 (lower is better) Translates to: ILVAPPVLGVRC*SDVSCCPQCSP Trigger: TGGGCTGCACTGGGGGCAGCAGCTCACATCGGACCAGCACCTGACCCCGAGGACTGGTGGAGCTACAAGGAT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000084798.9 |
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| CDS TCA 72 bp | TGTGGGCCAAGGGCTGCAGGGGCCGGCTGTTACCGCTaGGGCTCTGGAAGATCTGAGATGGAGGATTCTGGC | + |
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Preference number: 6 (lower is better) Translates to: CGPRAAGAGCYR*GSGRSEMEDSG Trigger: GCCAGAATCCTCCATCTCAGATCTTCCAGAGCCTCAGCGGTAACAGCCGGCCCCTGCAGCCCTTGGCCCACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000084798.9 ENST00000596080.1 ENST00000599267.1 |
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| CDS TCA 72 bp | CTCCGTCGCGAGCTCCAAACAGCAGCCGCAGTTCACTaGGTCGGTGGCTGTAAAGGAGGGGACCTCCAGACA | + |
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Preference number: 6 (lower is better) Translates to: LRRELQTAAAVH*VGGCKGGDLQT Trigger: TGTCTGGAGGTCCCCTCCTTTACAGCCACCGACTCAGTGAACTGCGGCTGCTGTTTGGAGCTCGCGACGGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000084798.9 |
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| CDS GCA 72 bp | ATTATCCTTGTAGCTCCACCAGTCCTCGGGGTCAGGTaGTGGTCCGATGTGAGCTGCTGCCCCCAGTGCAGC | + |
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Preference number: 6 (lower is better) Translates to: IILVAPPVLGVR*WSDVSCCPQCS Trigger: GCTGCACTGGGGGCAGCAGCTCACATCGGACCAGCACCTGACCCCGAGGACTGGTGGAGCTACAAGGATAAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000084798.9 |
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| CDS GCA 72 bp | GAGGGGACCTCCAGACACATTGACCACAGGTCGGGGTaGAGGCAGGAAGGAGACATGTCGGCCGGTGTTGTA | + |
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Preference number: 6 (lower is better) Translates to: EGTSRHIDHRSG*RQEGDMSAGVV Trigger: TACAACACCGGCCGACATGTCTCCTTCCTGCCTGCACCCCGACCTGTGGTCAATGTGTCTGGAGGTCCCCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000084798.9 |
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| CDS TCA 72 bp | AGGGGCCGGCTGTTACCGCTGAGGCTCTGGAAGATCTaGGATGGAGGATTCTGGCTCAGGAGTCTCAGGGAG | + |
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Preference number: 6 (lower is better) Translates to: RGRLLPLRLWKI*DGGFWLRSLRE Trigger: CTCCCTGAGACTCCTGAGCCAGAATCCTCCATCTCAGATCTTCCAGAGCCTCAGCGGTAACAGCCGGCCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000084798.9 ENST00000596080.1 ENST00000599267.1 |
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| CDS GCA 72 bp | CCTCCAGCTTCGTGCTCTCCCCACCTCCTCCTCTCCTaGCTCTTCTCCCTGTTTCAGTCTCTCTTCTCTCTT | + |
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Preference number: 6 (lower is better) Translates to: PPASCSPHLLLS*LFSLFQSLFSL Trigger: AAGAGAGAAGAGAGACTGAAACAGGGAGAAGAGGCAGGAGAGGAGGAGGTGGGGAGAGCACGAAGCTGGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000084798.9 |
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| CDS CAA 90 bp | ATCTTCCTACTCCTCTCAGCCTTCTGCTGCCCCCAGGGCTACCTCTaGGTTCCTAACCCACACCTCCTCTCCGTTCTCTTTTCATTAAGC | + |
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Preference number: 6 (lower is better) Translates to: IFLLLSAFCCPQGYL*VPNPHLLSVLFSLS Trigger: GCTTAATGAAAAGAGAACGGAGAGGAGGTGTGGGTTAGGAACCAAGAGGTAGCCCTGGGGGCAGCAGAAGGCTGAGAGGAGTAGGAAGAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000084798.9 |
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| CDS CCA 72 bp | AGTGATGGTGTCGCGGTTAAGGAGGCGACTGAGGAATaGGTTAGAGGTACTGGCAACGTTGACAAAGAGGCT | + |
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Preference number: 6 (lower is better) Translates to: SDGVAVKEATEE*VRGTGNVDKEA Trigger: AGCCTCTTTGTCAACGTTGCCAGTACCTCTAACCCATTCCTCAGTCGCCTCCTTAACCGCGACACCATCACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000084798.9 |
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