RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CA1 (Homo sapiens)

Ensembl gene IDs: ENSG00000133742

Ensembl transcript IDs: ENST00000431316.3, ENST00000517429.5, ENST00000517590.5, ENST00000517618.5, ENST00000518341.5, ENST00000519129.5, ENST00000519991.5, ENST00000520093.5, ENST00000520663.5, ENST00000520990.5, ENST00000521679.5, ENST00000521846.5, ENST00000522389.5, ENST00000522579.5, ENST00000522662.5, ENST00000522814.5, ENST00000523022.6, ENST00000523712.5, ENST00000523858.5, ENST00000523953.5, ENST00000524324.5, ENST00000542576.5, ENST00000626824.1

Found 277 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ACCAACCTTCATCAAAACACCAATAACTGCCAAACCATCAGCCTTTaGGGCAGCTTCAGCAAGGCTGGAGTACTTTGCAGAATTCCAGTG +
Preference number: 1 (lower is better)
Translates to: TNLHQNTNNCQTISL*GSFSKAGVLCRIPV
Trigger: CACTGGAATTCTGCAAAGTACTCCAGCCTTGCTGAAGCTGCCTCAAAGGCTGATGGTTTGGCAGTTATTGGTGTTTTGATGAAGGTTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517429.5
3UTR CCA 90 bp CTAACTAGTTGTAATAATGGCAGAGAAGCATTGTCCTTGCTAACGTaGGGAGAAGAAGTGAAAGCAATATCCAGAAGCGTCATCTTCCTA +
Preference number: 1 (lower is better)
Translates to: LTSCNNGREALSLLT*GEEVKAISRSVIFL
Trigger: TAGGAAGATGACGCTTCTGGATATTGCTTTCACTTCTTCTCCCCACGTTAGCAAGGACAATGCTTCTCTGCCATTATTACAACTAGTTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000523022.6
ENST00000523953.5
ENST00000626824.1
3UTR-3UTR CCA 90 bp TACTGCCCCAGTGAAAATGGAACTGAAAGAGCCTGTAGCTGTCAGAGAAAGGACACCTTTCAGCACACCTaGGCGTTTTCCAGAAGTCCA +
Preference number: 2 (lower is better)
Translates to: YCPSENGTERACSCQRKDTFQHT*AFSRSP
Trigger: TGGACTTCTGGAAAACGCCCAGGTGTGCTGAAAGGT...GTCCTTTCTCTGACAGCTACAGGCTCTTTCAGTTCCATTTTCACTGGGGCAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000517429.5
3UTR-3UTR TCA 90 bp CCTTTGAGGCAGCTTCAGCAAGGCTGGAGTACTTTGCAGAATTCCAGTGAGCTAATCCACTGTATGTTCTaGACCATGCTCATTTGTACT +
Preference number: 2 (lower is better)
Translates to: PLRQLQQGWSTLQNSSELIHCMF*TMLICT
Trigger: AGTACAAATGAGCATGGTTCAGAACATACAGTGGAT...TAGCTCACTGGAATTCTGCAAAGTACTCCAGCCTTGCTGAAGCTGCCTCAAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517429.5
3UTR-3UTR TCA 90 bp CATCAAGTACTTTCTGCAGCTTTGGGTTGGCCTCACCAACCTTCATCAAAACACGCTCGGCAGAATATTTaGCTCCATCCACTGTATGTT +
Preference number: 2 (lower is better)
Translates to: HQVLSAALGWPHQPSSKHARQNI*LHPLYV
Trigger: AACATACAGTGGATGGAGTCAAATATTCTGCCGAGC...GTGTTTTGATGAAGGTTGGTGAGGCCAACCCAAAGCTGCAGAAAGTACTTGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517429.5
3UTR-3UTR GCA 90 bp CATCAAGTACTTTCTGCAGCTTTGGGTTGGCCTCACCAACCTTCATCAAAACACGTATGTTCTGAACCATaGTCATTTGTACTGCCCCAG +
Preference number: 2 (lower is better)
Translates to: HQVLSAALGWPHQPSSKHVCSEP*SFVLPQ
Trigger: CTGGGGCAGTACAAATGAGCATGGTTCAGAACATAC...GTGTTTTGATGAAGGTTGGTGAGGCCAACCCAAAGCTGCAGAAAGTACTTGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517429.5
3UTR-3UTR GCA 90 bp GTTGGCCTCACCAACCTTCATCAAAACACCAATAACTGCCAAACCATCAGCCTTAAGGCTGGAGTACTTTaGAGAATTCCAGTGAGCTAC +
Preference number: 2 (lower is better)
Translates to: VGLTNLHQNTNNCQTISLKAGVL*RIPVSY
Trigger: GTAGCTCACTGGAATTCTGCAAAGTACTCCAGCCTT...AAGGCTGATGGTTTGGCAGTTATTGGTGTTTTGATGAAGGTTGGTGAGGCCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517429.5
3UTR-3UTR CCA 90 bp AGTACTTTCTGCAGCTTTGGGTTGGCCTCACCAACCTTCATCAAAACACCAATACAGCTTCAGCAAGGCTaGAGTACTTTGCAGAATTCC +
Preference number: 2 (lower is better)
Translates to: STFCSFGLASPTFIKTPIQLQQG*STLQNS
Trigger: GGAATTCTGCAAAGTACTCCAGCCTTGCTGAAGCTG...TATTGGTGTTTTGATGAAGGTTGGTGAGGCCAACCCAAAGCTGCAGAAAGTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517429.5
3UTR-3UTR TCA 90 bp ACACAAATGGTAGCAATGTTGGGCCAGCATAACGATATTAAATCCAGTGGTCATGCAGGGCTGTGTTCTTaGGGAAGGACAAGTTTCTTC +
Preference number: 2 (lower is better)
Translates to: TQMVAMLGQHNDIKSSGHAGLCS*GRTSFF
Trigger: GAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGC...ATGACCACTGGATTTAATATCGTTATGCTGGCCCAACATTGCTACCATTTGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000523022.6
ENST00000523953.5
ENST00000626824.1
3UTR CAA 90 bp CCATGCAAACTAACTAGTTGTAATAATGGCAGAGAAGCATTGTCCTaGCTAACGTGGGGAGAAGAAGTGAAAGCAATATCCAGAAGCGTC +
Preference number: 2 (lower is better)
Translates to: PCKLTSCNNGREALS*LTWGEEVKAISRSV
Trigger: GACGCTTCTGGATATTGCTTTCACTTCTTCTCCCCACGTTAGCAAGGACAATGCTTCTCTGCCATTATTACAACTAGTTAGTTTGCATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000523022.6
ENST00000523953.5
ENST00000626824.1
3UTR-3UTR CAA 90 bp TTAATTGCTTGGAGGGCATCAAGTACTTTCTGCAGCTTTGGGTTGGCCTCACCACCAAACCATCAGCCTTaGAGGCAGCTTCAGCAAGGC +
Preference number: 3 (lower is better)
Translates to: LIAWRASSTFCSFGLASPPNHQP*RQLQQG
Trigger: GCCTTGCTGAAGCTGCCTCAAAGGCTGATGGTTTGG...TGGTGAGGCCAACCCAAAGCTGCAGAAAGTACTTGATGCCCTCCAAGCAATTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517429.5
3UTR TCA 72 bp CATCAAAACACCAATAACTGCCAAACCATCAGCCTTTaGGGCAGCTTCAGCAAGGCTGGAGTACTTTGCAGA +
Preference number: 3 (lower is better)
Translates to: HQNTNNCQTISL*GSFSKAGVLCR
Trigger: TCTGCAAAGTACTCCAGCCTTGCTGAAGCTGCCTCAAAGGCTGATGGTTTGGCAGTTATTGGTGTTTTGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517429.5
3UTR-3UTR CAA 90 bp CTTTGCAGAATTCCAGTGAGCTACGTGAAGCTCGGCAGAATATTTGACTCCATCCTGAACCATGCTCATTaGTACTGCCCCAGTGAAAAT +
Preference number: 3 (lower is better)
Translates to: LCRIPVSYVKLGRIFDSILNHAH*YCPSEN
Trigger: ATTTTCACTGGGGCAGTACAAATGAGCATGGTTCAG...GATGGAGTCAAATATTCTGCCGAGCTTCACGTAGCTCACTGGAATTCTGCAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517429.5
3UTR CCA 72 bp TGTAATAATGGCAGAGAAGCATTGTCCTTGCTAACGTaGGGAGAAGAAGTGAAAGCAATATCCAGAAGCGTC +
Preference number: 3 (lower is better)
Translates to: CNNGREALSLLT*GEEVKAISRSV
Trigger: GACGCTTCTGGATATTGCTTTCACTTCTTCTCCCCACGTTAGCAAGGACAATGCTTCTCTGCCATTATTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000523022.6
ENST00000523953.5
ENST00000626824.1
3UTR-3UTR CAA 90 bp ACACAAATGGTAGCAATGTTGGGCCAGCATAACGATATTAAATCCAGTGGTCATAGCAGGGCTGTGTTCTaGAGGAAGGACAAGTTTCTT +
Preference number: 3 (lower is better)
Translates to: TQMVAMLGQHNDIKSSGHSRAVF*RKDKFL
Trigger: AAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCT...ATGACCACTGGATTTAATATCGTTATGCTGGCCCAACATTGCTACCATTTGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000523022.6
ENST00000523953.5
ENST00000626824.1
3UTR-3UTR CAA 90 bp ACACAAATGGTAGCAATGTTGGGCCAGCATAACGATATTAAATCCAGTGGTCATCCAGCTGCTCTTAGGTaGTTGTATTTGAAGCAAAAT +
Preference number: 3 (lower is better)
Translates to: TQMVAMLGQHNDIKSSGHPAALR*LYLKQN
Trigger: ATTTTGCTTCAAATACAACAACCTAAGAGCAGCTGG...ATGACCACTGGATTTAATATCGTTATGCTGGCCCAACATTGCTACCATTTGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000523022.6
ENST00000523953.5
ENST00000626824.1
3UTR-3UTR CAA 90 bp ACACAAATGGTAGCAATGTTGGGCCAGCATAACGATATTAAATCCAGTGGTCATGCTGCTCTTAGGTTGTaGTATTTGAAGCAAAATACT +
Preference number: 3 (lower is better)
Translates to: TQMVAMLGQHNDIKSSGHAALRL*YLKQNT
Trigger: AGTATTTTGCTTCAAATACAACAACCTAAGAGCAGC...ATGACCACTGGATTTAATATCGTTATGCTGGCCCAACATTGCTACCATTTGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000523022.6
ENST00000523953.5
ENST00000626824.1
CDS-3UTR CCA 90 bp GCTTGGAGGGCATCAAGTACTTTCTGCAGCTTTGGGTTGGCCTCACCAACCTTCTCTGCAGCTTTGGGTTaGCCTCACCAACCTTCATCA +
Preference number: 4 (lower is better)
Translates to: AWRASSTFCSFGLASPTFSAALG*PHQPSS
Trigger: TGATGAAGGTTGGTGAGGCCAACCCAAAGCTGCAGA...GAAGGTTGGTGAGGCCAACCCAAAGCTGCAGAAAGTACTTGATGCCCTCCAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517429.5
CDS-3UTR TCA 90 bp TTAATTGCTTGGAGGGCATCAAGTACTTTCTGCAGCTTTGGGTTGGCCTCACCACAAACCATCAGCCTTTaGGGCAGCTTCAGCAAGGCT +
Preference number: 4 (lower is better)
Translates to: LIAWRASSTFCSFGLASPQTISL*GSFSKA
Trigger: AGCCTTGCTGAAGCTGCCTCAAAGGCTGATGGTTTG...TGGTGAGGCCAACCCAAAGCTGCAGAAAGTACTTGATGCCCTCCAAGCAATTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517429.5
CDS-3UTR CCA 90 bp GATTATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGACTGCCCTTCAGAGGTTaGGTTGGGCGGTTGTTGTGC +
Preference number: 4 (lower is better)
Translates to: DYVRSRAVFLRKDKFLLRLPFRG*VGRLLC
Trigger: GCACAACAACCGCCCAACCCAACCTCTGAAGGGCAG...TCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATAATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000431316.3
ENST00000521679.5
ENST00000522389.5
ENST00000523022.6
ENST00000523953.5
ENST00000542576.5
ENST00000626824.1
CDS-3UTR CCA 90 bp TATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGAATCCTGCCCTTCAGAGGTTaGGTTGGGCGGTTGTTGTGC +
Preference number: 4 (lower is better)
Translates to: YVRSRAVFLRKDKFLLRILPFRG*VGRLLC
Trigger: GCACAACAACCGCCCAACCCAACCTCTGAAGGGCAG...GATTCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000431316.3
ENST00000521679.5
ENST00000522389.5
ENST00000523022.6
ENST00000523953.5
ENST00000542576.5
ENST00000626824.1
CDS-3UTR TCA 90 bp GATTATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGATTGTGCCAGCTGCTCTaGGCTGACACTGATGCTCTC +
Preference number: 4 (lower is better)
Translates to: DYVRSRAVFLRKDKFLLRLCQLL*ADTDAL
Trigger: GAGAGCATCAGTGTCAGCTCAGAGCAGCTGGCACAA...TCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATAATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000431316.3
ENST00000522389.5
ENST00000523022.6
ENST00000523953.5
ENST00000542576.5
ENST00000626824.1
CDS-3UTR TCA 90 bp TATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGAATCTTGTGCCAGCTGCTCTaGGCTGACACTGATGCTCTC +
Preference number: 4 (lower is better)
Translates to: YVRSRAVFLRKDKFLLRILCQLL*ADTDAL
Trigger: GAGAGCATCAGTGTCAGCTCAGAGCAGCTGGCACAA...GATTCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000431316.3
ENST00000522389.5
ENST00000523022.6
ENST00000523953.5
ENST00000542576.5
ENST00000626824.1
CDS-3UTR GCA 90 bp CAGCCTTTGAGGCAGCTTCAGCAAGGCTGGAGTACTTTGCAGAATTCCAGTGAGTCCCCAGTCTGGACTTaGCATTATCTTCTACTGAGT +
Preference number: 4 (lower is better)
Translates to: QPLRQLQQGWSTLQNSSESPVWT*HYLLLS
Trigger: ACTCAGTAGAAGATAATGGCAAGTCCAGACTGGGGA...CTCACTGGAATTCTGCAAAGTACTCCAGCCTTGCTGAAGCTGCCTCAAAGGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517429.5
CDS-3UTR GCA 90 bp GCCCCAGTGAAAATGGAACTGAAAGAGCCTGTAGCTGTCAGAGAAAGGACCACCGTATGTTCTGAACCATaGTCATTTGTACTGCCCCAG +
Preference number: 4 (lower is better)
Translates to: APVKMELKEPVAVRERTTVCSEP*SFVLPQ
Trigger: CTGGGGCAGTACAAATGAGCATGGTTCAGAACATAC...GGTGGTCCTTTCTCTGACAGCTACAGGCTCTTTCAGTTCCATTTTCACTGGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000517429.5
CDS-3UTR GCA 90 bp TATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGAATCGGGCGGTTGTTGTGCTaGATGGGGACAGCGTTATCA +
Preference number: 4 (lower is better)
Translates to: YVRSRAVFLRKDKFLLRIGRLLC*MGTALS
Trigger: TGATAACGCTGTCCCCATGCAGCACAACAACCGCCC...GATTCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000431316.3
ENST00000522389.5
ENST00000523022.6
ENST00000523953.5
ENST00000542576.5
ENST00000626824.1
CDS-3UTR GCA 90 bp GATTATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGAGGGCGGTTGTTGTGCTaGATGGGGACAGCGTTATCA +
Preference number: 4 (lower is better)
Translates to: DYVRSRAVFLRKDKFLLRGRLLC*MGTALS
Trigger: TGATAACGCTGTCCCCATGCAGCACAACAACCGCCC...TCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000431316.3
ENST00000522389.5
ENST00000523022.6
ENST00000523953.5
ENST00000542576.5
ENST00000626824.1
CDS-3UTR GCA 90 bp TATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGAATCGTTGGGCGGTTGTTGTaGTGCATGGGGACAGCGTTA +
Preference number: 4 (lower is better)
Translates to: YVRSRAVFLRKDKFLLRIVGRLL*CMGTAL
Trigger: TAACGCTGTCCCCATGCAGCACAACAACCGCCCAAC...GATTCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000431316.3
ENST00000522389.5
ENST00000523022.6
ENST00000523953.5
ENST00000542576.5
ENST00000626824.1
CDS-3UTR GCA 90 bp GATTATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGAGTTGGGCGGTTGTTGTaGTGCATGGGGACAGCGTTA +
Preference number: 4 (lower is better)
Translates to: DYVRSRAVFLRKDKFLLRVGRLL*CMGTAL
Trigger: TAACGCTGTCCCCATGCAGCACAACAACCGCCCAAC...TCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000431316.3
ENST00000522389.5
ENST00000523022.6
ENST00000523953.5
ENST00000542576.5
ENST00000626824.1
CDS-3UTR GCA 90 bp CCTGTAGCTGTCAGAGAAAGGACCACCTTTCAGCACACCTGGGCGTTTTCCAGATCCAGAAGTCCAAGATaGCTCACTAGATTACAGCAA +
Preference number: 4 (lower is better)
Translates to: PVAVRERTTFQHTWAFSRSRSPR*LTRLQQ
Trigger: TTGCTGTAATCTAGTGAGGCATCTTGGACTTCTGGA...TCTGGAAAACGCCCAGGTGTGCTGAAAGGTGGTCCTTTCTCTGACAGCTACAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517429.5
CDS-3UTR GCA 90 bp TATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGAATCGGGCGGTTGTTGTGCTaGTCTGAGCTGACACTGATG +
Preference number: 4 (lower is better)
Translates to: YVRSRAVFLRKDKFLLRIGRLLC*SELTLM
Trigger: CATCAGTGTCAGCTCAGAGCAGCACAACAACCGCCC...GATTCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521679.5
CDS-3UTR CCA 90 bp TTATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGAATCTGCCCTTCAGAGGTTaGGTTGGGCGGTTGTTGTGC +
Preference number: 4 (lower is better)
Translates to: LCQKQGCVLEEGQVSSQNLPFRG*VGRLLC
Trigger: GCACAACAACCGCCCAACCCAACCTCTGAAGGGCAG...ATTCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000431316.3
ENST00000521679.5
ENST00000522389.5
ENST00000523022.6
ENST00000523953.5
ENST00000542576.5
ENST00000626824.1
CDS-3UTR CCA 90 bp TATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGAATCCTTCAGAGGTTGGGTTaGGCGGTTGTTGTGCTGCTC +
Preference number: 4 (lower is better)
Translates to: YVRSRAVFLRKDKFLLRILQRLG*AVVVLL
Trigger: GAGCAGCACAACAACCGCCCAACCCAACCTCTGAAG...GATTCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521679.5
CDS-3UTR TCA 90 bp CCTGTAGCTGTCAGAGAAAGGACCACCTTTCAGCACACCTGGGCGTTTTCCAGAATCCACTGTATGTTCTaGACCATGCTCATTTGTACT +
Preference number: 4 (lower is better)
Translates to: PVAVRERTTFQHTWAFSRIHCMF*TMLICT
Trigger: AGTACAAATGAGCATGGTTCAGAACATACAGTGGAT...TCTGGAAAACGCCCAGGTGTGCTGAAAGGTGGTCCTTTCTCTGACAGCTACAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517429.5
CDS-3UTR TCA 90 bp TATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGAATCCAAACCATCAGCCTTTaGGGCAGCTTCAGCAAGGCT +
Preference number: 4 (lower is better)
Translates to: YVRSRAVFLRKDKFLLRIQTISL*GSFSKA
Trigger: AGCCTTGCTGAAGCTGCCTCAAAGGCTGATGGTTTG...GATTCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000431316.3
ENST00000521679.5
ENST00000522389.5
ENST00000523022.6
ENST00000523953.5
ENST00000542576.5
ENST00000626824.1
CDS-3UTR TCA 90 bp TTATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGAATTTGTGCCAGCTGCTCTaGGCTGACACTGATGCTCTC +
Preference number: 4 (lower is better)
Translates to: LCQKQGCVLEEGQVSSQNLCQLL*ADTDAL
Trigger: GAGAGCATCAGTGTCAGCTCAGAGCAGCTGGCACAA...ATTCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000431316.3
ENST00000522389.5
ENST00000523022.6
ENST00000523953.5
ENST00000542576.5
ENST00000626824.1
CDS-3UTR TCA 90 bp GATTATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGAGTTGTTGTGCTGCTCTaGGCTGACACTGATGCTCTC +
Preference number: 4 (lower is better)
Translates to: DYVRSRAVFLRKDKFLLRVVVLL*ADTDAL
Trigger: GAGAGCATCAGTGTCAGCTCAGAGCAGCACAACAAC...TCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATAATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521679.5
CDS-3UTR TCA 90 bp TATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGAATCAGTGGCCCCAGAGTGTaGGAACCTGATAAGGGAAGT +
Preference number: 4 (lower is better)
Translates to: YVRSRAVFLRKDKFLLRISGPRV*EPDKGS
Trigger: ACTTCCCTTATCAGGTTCTCACACTCTGGGGCCACT...GATTCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000523953.5
ENST00000626824.1
CDS-3UTR GCA 90 bp TATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGAATCCGGAATTGTGCCAGCTaGTCTGAGCTGACACTGATG +
Preference number: 4 (lower is better)
Translates to: YVRSRAVFLRKDKFLLRIRNCAS*SELTLM
Trigger: CATCAGTGTCAGCTCAGAGCAGCTGGCACAATTCCG...GATTCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000431316.3
ENST00000522389.5
ENST00000523022.6
ENST00000523953.5
ENST00000542576.5
ENST00000626824.1
CDS-3UTR GCA 90 bp TTATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGAATGTTGGGCGGTTGTTGTaGTGCATGGGGACAGCGTTA +
Preference number: 4 (lower is better)
Translates to: LCQKQGCVLEEGQVSSQNVGRLL*CMGTAL
Trigger: TAACGCTGTCCCCATGCAGCACAACAACCGCCCAAC...ATTCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000431316.3
ENST00000522389.5
ENST00000523022.6
ENST00000523953.5
ENST00000542576.5
ENST00000626824.1
CDS-3UTR CCA 90 bp GCTTGGAGGGCATCAAGTACTTTCTGCAGCTTTGGGTTGGCCTCACCAACCTTCATCATATCCCCAGTCTaGACTTGCCATTATCTTCTA +
Preference number: 4 (lower is better)
Translates to: AWRASSTFCSFGLASPTFIISPV*TCHYLL
Trigger: TAGAAGATAATGGCAAGTCCAGACTGGGGATATGAT...GAAGGTTGGTGAGGCCAACCCAAAGCTGCAGAAAGTACTTGATGCCCTCCAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517429.5
CDS-3UTR CCA 90 bp TATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGAATCCTTCAGAGGTTGGGTTaGGCGGTTGTTGTGCTGCAT +
Preference number: 4 (lower is better)
Translates to: YVRSRAVFLRKDKFLLRILQRLG*AVVVLH
Trigger: ATGCAGCACAACAACCGCCCAACCCAACCTCTGAAG...GATTCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000431316.3
ENST00000522389.5
ENST00000523022.6
ENST00000523953.5
ENST00000542576.5
ENST00000626824.1
CDS-3UTR CCA 90 bp ACACAAATGGTAGCAATGTTGGGCCAGCATAACGATATTAAATCCAGTGGTCATCTGCCCTTCAGAGGTTaGGTTGGGCGGTTGTTGTGC +
Preference number: 4 (lower is better)
Translates to: TQMVAMLGQHNDIKSSGHLPFRG*VGRLLC
Trigger: GCACAACAACCGCCCAACCCAACCTCTGAAGGGCAG...ATGACCACTGGATTTAATATCGTTATGCTGGCCCAACATTGCTACCATTTGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000523022.6
ENST00000523953.5
ENST00000626824.1
CDS-3UTR CCA 90 bp GCCTCACCAACCTTCATCAAAACACCAATAACTGCCAAACCATCAGCCTTTGAGACCTTTCAGCACACCTaGGCGTTTTCCAGAAGTCCA +
Preference number: 4 (lower is better)
Translates to: ASPTFIKTPITAKPSAFETFQHT*AFSRSP
Trigger: TGGACTTCTGGAAAACGCCCAGGTGTGCTGAAAGGT...CTCAAAGGCTGATGGTTTGGCAGTTATTGGTGTTTTGATGAAGGTTGGTGAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517429.5
CDS-3UTR CCA 90 bp TATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGAATCAGGCTGGAGGGGGAATaGGCAGCTTATGTACAGCAA +
Preference number: 4 (lower is better)
Translates to: YVRSRAVFLRKDKFLLRIRLEGE*AAYVQQ
Trigger: TTGCTGTACATAAGCTGCCCATTCCCCCTCCAGCCT...GATTCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000523953.5
ENST00000626824.1
CDS-3UTR TCA 90 bp TTATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGAATCAAACCATCAGCCTTTaGGGCAGCTTCAGCAAGGCT +
Preference number: 4 (lower is better)
Translates to: LCQKQGCVLEEGQVSSQNQTISL*GSFSKA
Trigger: AGCCTTGCTGAAGCTGCCTCAAAGGCTGATGGTTTG...ATTCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000431316.3
ENST00000521679.5
ENST00000522389.5
ENST00000523022.6
ENST00000523953.5
ENST00000542576.5
ENST00000626824.1
CDS-3UTR TCA 90 bp TATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGAATCGCAGGGCTGTGTTCTTaGGGAAGGACAAGTTTCTTC +
Preference number: 4 (lower is better)
Translates to: YVRSRAVFLRKDKFLLRIAGLCS*GRTSFF
Trigger: GAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGC...GATTCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000431316.3
ENST00000521679.5
ENST00000522389.5
ENST00000523022.6
ENST00000523953.5
ENST00000542576.5
ENST00000626824.1
CDS-3UTR TCA 90 bp GATTATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGAGCAGGGCTGTGTTCTTaGGGAAGGACAAGTTTCTTC +
Preference number: 4 (lower is better)
Translates to: DYVRSRAVFLRKDKFLLRAGLCS*GRTSFF
Trigger: GAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGC...TCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATAATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000431316.3
ENST00000521679.5
ENST00000522389.5
ENST00000523022.6
ENST00000523953.5
ENST00000542576.5
ENST00000626824.1
CDS-3UTR TCA 90 bp GAAAATGGAACTGAAAGAGCCTGTAGCTGTCAGAGAAAGGACCACCTTTCAGCACTTTTTAGCTCTGAATaGGAGAAGGCTGCCACAGAG +
Preference number: 4 (lower is better)
Translates to: ENGTERACSCQRKDHLSALFSSE*EKAATE
Trigger: CTCTGTGGCAGCCTTCTCTCATTCAGAGCTAAAAAG...TGCTGAAAGGTGGTCCTTTCTCTGACAGCTACAGGCTCTTTCAGTTCCATTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000517429.5
CDS-3UTR TCA 90 bp GATTATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGAGAAAACAGCTCTGAATaGGAGAAGGCTGCCACAGAG +
Preference number: 4 (lower is better)
Translates to: DYVRSRAVFLRKDKFLLRENSSE*EKAATE
Trigger: CTCTGTGGCAGCCTTCTCTCATTCAGAGCTGTTTTC...TCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000523953.5
ENST00000626824.1
CDS-3UTR TCA 90 bp GATTATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGACGTGGGGAGAAGAAGTaGAAGCAATATCCAGAAGCG +
Preference number: 4 (lower is better)
Translates to: DYVRSRAVFLRKDKFLLRRGEKK*KQYPEA
Trigger: CGCTTCTGGATATTGCTTTCACTTCTTCTCCCCACG...TCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000523022.6
ENST00000523953.5
ENST00000626824.1
CDS-3UTR TCA 90 bp TTATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGAATAGTGGCCCCAGAGTGTaGGAACCTGATAAGGGAAGT +
Preference number: 4 (lower is better)
Translates to: LCQKQGCVLEEGQVSSQNSGPRV*EPDKGS
Trigger: ACTTCCCTTATCAGGTTCTCACACTCTGGGGCCACT...ATTCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000523953.5
ENST00000626824.1
CDS-3UTR GCA 90 bp TTATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGAATCGGAATTGTGCCAGCTaGTCTGAGCTGACACTGATG +
Preference number: 4 (lower is better)
Translates to: LCQKQGCVLEEGQVSSQNRNCAS*SELTLM
Trigger: CATCAGTGTCAGCTCAGAGCAGCTGGCACAATTCCG...ATTCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000431316.3
ENST00000522389.5
ENST00000523022.6
ENST00000523953.5
ENST00000542576.5
ENST00000626824.1
CDS-3UTR GCA 90 bp GATTATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGAAAGCTCTCACTGTTCTaGCCTTCAGAGGTTGGGTTG +
Preference number: 4 (lower is better)
Translates to: DYVRSRAVFLRKDKFLLRKLSLF*PSEVGL
Trigger: CAACCCAACCTCTGAAGGGCAGAACAGTGAGAGCTT...TCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATAATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000431316.3
ENST00000521679.5
ENST00000522389.5
ENST00000523022.6
ENST00000523953.5
ENST00000542576.5
ENST00000626824.1
CDS-3UTR GCA 90 bp TATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGAATCAAGCTCTCACTGTTCTaGCCTTCAGAGGTTGGGTTG +
Preference number: 4 (lower is better)
Translates to: YVRSRAVFLRKDKFLLRIKLSLF*PSEVGL
Trigger: CAACCCAACCTCTGAAGGGCAGAACAGTGAGAGCTT...GATTCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000431316.3
ENST00000521679.5
ENST00000522389.5
ENST00000523022.6
ENST00000523953.5
ENST00000542576.5
ENST00000626824.1
CDS-3UTR CCA 90 bp AAAGAGCCTGTAGCTGTCAGAGAAAGGACCACCTTTCAGCACACCTGGGCGTTTTATTTCCATTGGCAATaGGATACAGCTTGCTCCATT +
Preference number: 4 (lower is better)
Translates to: KEPVAVRERTTFQHTWAFYFHWQ*DTACSI
Trigger: AATGGAGCAAGCTGTATCCCATTGCCAATGGAAATA...AAACGCCCAGGTGTGCTGAAAGGTGGTCCTTTCTCTGACAGCTACAGGCTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517429.5
CDS-3UTR CCA 90 bp GCCCCAGTGAAAATGGAACTGAAAGAGCCTGTAGCTGTCAGAGAAAGGACCACCATATCAACAGGGGACTaGTTATTTCCATTGGCAATG +
Preference number: 4 (lower is better)
Translates to: APVKMELKEPVAVRERTTISTGD*LFPLAM
Trigger: CATTGCCAATGGAAATAACCAGTCCCCTGTTGATAT...GGTGGTCCTTTCTCTGACAGCTACAGGCTCTTTCAGTTCCATTTTCACTGGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000517429.5
CDS-3UTR CCA 90 bp GAAAATGGAACTGAAAGAGCCTGTAGCTGTCAGAGAAAGGACCACCTTTCAGCACAGCTTCAGCAAGGCTaGAGTACTTTGCAGAATTCC +
Preference number: 4 (lower is better)
Translates to: ENGTERACSCQRKDHLSAQLQQG*STLQNS
Trigger: GGAATTCTGCAAAGTACTCCAGCCTTGCTGAAGCTG...TGCTGAAAGGTGGTCCTTTCTCTGACAGCTACAGGCTCTTTCAGTTCCATTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517429.5
CDS-3UTR CCA 90 bp TATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGAATCTCTGCAGCTTTGGGTTaGCCTCACCAACCTTCATCA +
Preference number: 4 (lower is better)
Translates to: YVRSRAVFLRKDKFLLRISAALG*PHQPSS
Trigger: TGATGAAGGTTGGTGAGGCCAACCCAAAGCTGCAGA...GATTCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431316.3
ENST00000521679.5
ENST00000523022.6
ENST00000523953.5
ENST00000542576.5
CDS-3UTR CCA 90 bp GATTATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGATCTGCAGCTTTGGGTTaGCCTCACCAACCTTCATCA +
Preference number: 4 (lower is better)
Translates to: DYVRSRAVFLRKDKFLLRSAALG*PHQPSS
Trigger: TGATGAAGGTTGGTGAGGCCAACCCAAAGCTGCAGA...TCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATAATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431316.3
ENST00000521679.5
ENST00000523022.6
ENST00000523953.5
ENST00000542576.5
CDS-3UTR CCA 90 bp TATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGAATCGGTTGTTGTGCTGCATaGGGACAGCGTTATCACCTT +
Preference number: 4 (lower is better)
Translates to: YVRSRAVFLRKDKFLLRIGCCAA*GQRYHL
Trigger: AAGGTGATAACGCTGTCCCCATGCAGCACAACAACC...GATTCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000431316.3
ENST00000522389.5
ENST00000523022.6
ENST00000523953.5
ENST00000542576.5
ENST00000626824.1
CDS-3UTR CCA 90 bp GATTATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGAGGTTGTTGTGCTGCATaGGGACAGCGTTATCACCTT +
Preference number: 4 (lower is better)
Translates to: DYVRSRAVFLRKDKFLLRGCCAA*GQRYHL
Trigger: AAGGTGATAACGCTGTCCCCATGCAGCACAACAACC...TCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATAATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000431316.3
ENST00000522389.5
ENST00000523022.6
ENST00000523953.5
ENST00000542576.5
ENST00000626824.1
CDS-3UTR CCA 90 bp TTATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGAATCTTCAGAGGTTGGGTTaGGCGGTTGTTGTGCTGCAT +
Preference number: 4 (lower is better)
Translates to: LCQKQGCVLEEGQVSSQNLQRLG*AVVVLH
Trigger: ATGCAGCACAACAACCGCCCAACCCAACCTCTGAAG...ATTCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000431316.3
ENST00000522389.5
ENST00000523022.6
ENST00000523953.5
ENST00000542576.5
ENST00000626824.1
CDS-3UTR CCA 90 bp TTATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGAATAGGCTGGAGGGGGAATaGGCAGCTTATGTACAGCAA +
Preference number: 4 (lower is better)
Translates to: LCQKQGCVLEEGQVSSQNRLEGE*AAYVQQ
Trigger: TTGCTGTACATAAGCTGCCCATTCCCCCTCCAGCCT...ATTCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000523953.5
ENST00000626824.1
3UTR CAA 72 bp GCTTGGAGGGCATCAAGTACTTTCTGCAGCTTTGGGTaGGCCTCACCAACCTTCATCAAAACACCAATAACT +
Preference number: 4 (lower is better)
Translates to: AWRASSTFCSFG*ASPTFIKTPIT
Trigger: AGTTATTGGTGTTTTGATGAAGGTTGGTGAGGCCAACCCAAAGCTGCAGAAAGTACTTGATGCCCTCCAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517429.5
CDS-3UTR TCA 90 bp ACACAAATGGTAGCAATGTTGGGCCAGCATAACGATATTAAATCCAGTGGTCATCAAACCATCAGCCTTTaGGGCAGCTTCAGCAAGGCT +
Preference number: 4 (lower is better)
Translates to: TQMVAMLGQHNDIKSSGHQTISL*GSFSKA
Trigger: AGCCTTGCTGAAGCTGCCTCAAAGGCTGATGGTTTG...ATGACCACTGGATTTAATATCGTTATGCTGGCCCAACATTGCTACCATTTGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000523022.6
ENST00000523953.5
ENST00000626824.1
CDS-3UTR TCA 90 bp TTATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGAATGAAAACAGCTCTGAATaGGAGAAGGCTGCCACAGAG +
Preference number: 4 (lower is better)
Translates to: LCQKQGCVLEEGQVSSQNENSSE*EKAATE
Trigger: CTCTGTGGCAGCCTTCTCTCATTCAGAGCTGTTTTC...ATTCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000523953.5
ENST00000626824.1
CDS-3UTR TCA 90 bp TTATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGAATATGGTAAGGATTGTCTaGGCTGCTGCAACCCCTGAA +
Preference number: 4 (lower is better)
Translates to: LCQKQGCVLEEGQVSSQNMVRIV*AAATPE
Trigger: TTCAGGGGTTGCAGCAGCTCAGACAATCCTTACCAT...ATTCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542576.5
CDS-3UTR GCA 90 bp TATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGAATCCATTTGATAGAAGGCTaGGGAATTGTGCCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: YVRSRAVFLRKDKFLLRIHLIEG*GIVPAA
Trigger: AGCAGCTGGCACAATTCCGCAGCCTTCTATCAAATG...GATTCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000431316.3
ENST00000522389.5
ENST00000523022.6
ENST00000523953.5
ENST00000542576.5
ENST00000626824.1
CDS-3UTR GCA 90 bp TTATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGAATAAGCTCTCACTGTTCTaGCCTTCAGAGGTTGGGTTG +
Preference number: 4 (lower is better)
Translates to: LCQKQGCVLEEGQVSSQNKLSLF*PSEVGL
Trigger: CAACCCAACCTCTGAAGGGCAGAACAGTGAGAGCTT...ATTCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000431316.3
ENST00000521679.5
ENST00000522389.5
ENST00000523022.6
ENST00000523953.5
ENST00000542576.5
ENST00000626824.1
CDS-3UTR CCA 90 bp GTTTTAATTGCTTGGAGGGCATCAAGTACTTTCTGCAGCTTTGGGTTGGCCTCATTCTTTGGCTGTGGCTaGGTTGTAGGAGACACTAAT +
Preference number: 4 (lower is better)
Translates to: VLIAWRASSTFCSFGLASFFGCG*VVGDTN
Trigger: ATTAGTGTCTCCTACAACCCAGCCACAGCCAAAGAA...TGAGGCCAACCCAAAGCTGCAGAAAGTACTTGATGCCCTCCAAGCAATTAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517429.5
CDS-3UTR CCA 90 bp TATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGAATCCAGCTTCAGCAAGGCTaGAGTACTTTGCAGAATTCC +
Preference number: 4 (lower is better)
Translates to: YVRSRAVFLRKDKFLLRIQLQQG*STLQNS
Trigger: GGAATTCTGCAAAGTACTCCAGCCTTGCTGAAGCTG...GATTCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000431316.3
ENST00000521679.5
ENST00000522389.5
ENST00000523022.6
ENST00000523953.5
ENST00000542576.5
ENST00000626824.1
CDS-3UTR CCA 90 bp GATTATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGACAGCTTCAGCAAGGCTaGAGTACTTTGCAGAATTCC +
Preference number: 4 (lower is better)
Translates to: DYVRSRAVFLRKDKFLLRQLQQG*STLQNS
Trigger: GGAATTCTGCAAAGTACTCCAGCCTTGCTGAAGCTG...TCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATAATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000431316.3
ENST00000521679.5
ENST00000522389.5
ENST00000523022.6
ENST00000523953.5
ENST00000542576.5
ENST00000626824.1
CDS-3UTR CCA 90 bp TTATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGAATTCTGCAGCTTTGGGTTaGCCTCACCAACCTTCATCA +
Preference number: 4 (lower is better)
Translates to: LCQKQGCVLEEGQVSSQNSAALG*PHQPSS
Trigger: TGATGAAGGTTGGTGAGGCCAACCCAAAGCTGCAGA...ATTCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431316.3
ENST00000521679.5
ENST00000523022.6
ENST00000523953.5
ENST00000542576.5
CDS-3UTR CCA 90 bp TTATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGAATGGTTGTTGTGCTGCATaGGGACAGCGTTATCACCTT +
Preference number: 4 (lower is better)
Translates to: LCQKQGCVLEEGQVSSQNGCCAA*GQRYHL
Trigger: AAGGTGATAACGCTGTCCCCATGCAGCACAACAACC...ATTCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000431316.3
ENST00000522389.5
ENST00000523022.6
ENST00000523953.5
ENST00000542576.5
ENST00000626824.1
CDS-3UTR CCA 90 bp ACACAAATGGTAGCAATGTTGGGCCAGCATAACGATATTAAATCCAGTGGTCATCTTCAGAGGTTGGGTTaGGCGGTTGTTGTGCTGCAT +
Preference number: 4 (lower is better)
Translates to: TQMVAMLGQHNDIKSSGHLQRLG*AVVVLH
Trigger: ATGCAGCACAACAACCGCCCAACCCAACCTCTGAAG...ATGACCACTGGATTTAATATCGTTATGCTGGCCCAACATTGCTACCATTTGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000523022.6
ENST00000523953.5
ENST00000626824.1
CDS-3UTR TCA 90 bp GATTATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGAGCTCGGCAGAATATTTaGCTCCATCCACTGTATGTT +
Preference number: 4 (lower is better)
Translates to: DYVRSRAVFLRKDKFLLRARQNI*LHPLYV
Trigger: AACATACAGTGGATGGAGTCAAATATTCTGCCGAGC...TCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431316.3
ENST00000521679.5
ENST00000523022.6
ENST00000523953.5
ENST00000542576.5
CDS-3UTR TCA 90 bp TTATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGAATCTTTTTAGCTCTGAATaGGAGAAGGCTGCCACAGAG +
Preference number: 4 (lower is better)
Translates to: LCQKQGCVLEEGQVSSQNLFSSE*EKAATE
Trigger: CTCTGTGGCAGCCTTCTCTCATTCAGAGCTAAAAAG...ATTCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523022.6
CDS-3UTR TCA 90 bp ACACAAATGGTAGCAATGTTGGGCCAGCATAACGATATTAAATCCAGTGGTCATCGTGGGGAGAAGAAGTaGAAGCAATATCCAGAAGCG +
Preference number: 4 (lower is better)
Translates to: TQMVAMLGQHNDIKSSGHRGEKK*KQYPEA
Trigger: CGCTTCTGGATATTGCTTTCACTTCTTCTCCCCACG...ATGACCACTGGATTTAATATCGTTATGCTGGCCCAACATTGCTACCATTTGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000523022.6
ENST00000523953.5
ENST00000626824.1
CDS-3UTR TCA 90 bp GATTATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGAGGCTTTCTGTTAGAATaGCCTCTTGATTGGTGGTGT +
Preference number: 4 (lower is better)
Translates to: DYVRSRAVFLRKDKFLLRGFLLE*PLDWWC
Trigger: ACACCACCAATCAAGAGGTCATTCTAACAGAAAGCC...TCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000523953.5
ENST00000626824.1
CDS-3UTR GCA 90 bp GATTATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGATCCCCAGTCTGGACTTaGCATTATCTTCTACTGAGT +
Preference number: 4 (lower is better)
Translates to: DYVRSRAVFLRKDKFLLRSPVWT*HYLLLS
Trigger: ACTCAGTAGAAGATAATGGCAAGTCCAGACTGGGGA...TCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000431316.3
ENST00000522389.5
ENST00000523022.6
ENST00000523953.5
ENST00000542576.5
ENST00000626824.1
CDS-3UTR GCA 90 bp AGTACTTTCTGCAGCTTTGGGTTGGCCTCACCAACCTTCATCAAAACACCAATACAATGGGATACAGCTTaGTCCATTGTTCAGGACCAT +
Preference number: 4 (lower is better)
Translates to: STFCSFGLASPTFIKTPIQWDTA*SIVQDH
Trigger: ATGGTCCTGAACAATGGAGCAAGCTGTATCCCATTG...TATTGGTGTTTTGATGAAGGTTGGTGAGGCCAACCCAAAGCTGCAGAAAGTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517429.5
CDS-3UTR GCA 90 bp TATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGAATCGTATGTTCTGAACCATaGTCATTTGTACTGCCCCAG +
Preference number: 4 (lower is better)
Translates to: YVRSRAVFLRKDKFLLRIVCSEP*SFVLPQ
Trigger: CTGGGGCAGTACAAATGAGCATGGTTCAGAACATAC...GATTCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431316.3
ENST00000521679.5
ENST00000523022.6
ENST00000523953.5
ENST00000542576.5
CDS-3UTR GCA 90 bp GATTATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGAGTATGTTCTGAACCATaGTCATTTGTACTGCCCCAG +
Preference number: 4 (lower is better)
Translates to: DYVRSRAVFLRKDKFLLRVCSEP*SFVLPQ
Trigger: CTGGGGCAGTACAAATGAGCATGGTTCAGAACATAC...TCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431316.3
ENST00000521679.5
ENST00000523022.6
ENST00000523953.5
ENST00000542576.5
CDS-3UTR GCA 90 bp AGTGAAAATGGAACTGAAAGAGCCTGTAGCTGTCAGAGAAAGGACCACCTTTCAAAGGCTGGAGTACTTTaGAGAATTCCAGTGAGCTAC +
Preference number: 4 (lower is better)
Translates to: SENGTERACSCQRKDHLSKAGVL*RIPVSY
Trigger: GTAGCTCACTGGAATTCTGCAAAGTACTCCAGCCTT...TGAAAGGTGGTCCTTTCTCTGACAGCTACAGGCTCTTTCAGTTCCATTTTCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517429.5
CDS-3UTR GCA 90 bp TATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGAATCAAGGCTGGAGTACTTTaGAGAATTCCAGTGAGCTAC +
Preference number: 4 (lower is better)
Translates to: YVRSRAVFLRKDKFLLRIKAGVL*RIPVSY
Trigger: GTAGCTCACTGGAATTCTGCAAAGTACTCCAGCCTT...GATTCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000431316.3
ENST00000521679.5
ENST00000522389.5
ENST00000523022.6
ENST00000523953.5
ENST00000542576.5
ENST00000626824.1
CDS-3UTR GCA 90 bp GATTATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGAAAGGCTGGAGTACTTTaGAGAATTCCAGTGAGCTAC +
Preference number: 4 (lower is better)
Translates to: DYVRSRAVFLRKDKFLLRKAGVL*RIPVSY
Trigger: GTAGCTCACTGGAATTCTGCAAAGTACTCCAGCCTT...TCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000431316.3
ENST00000521679.5
ENST00000522389.5
ENST00000523022.6
ENST00000523953.5
ENST00000542576.5
ENST00000626824.1
CDS-3UTR GCA 90 bp GATTATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGAGCCCTTGGTTTTAATTaGTTGGAGGGCATCAAGTAC +
Preference number: 4 (lower is better)
Translates to: DYVRSRAVFLRKDKFLLRALGFN*LEGIKY
Trigger: GTACTTGATGCCCTCCAAGCAATTAAAACCAAGGGC...TCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431316.3
ENST00000521679.5
ENST00000523022.6
ENST00000523953.5
ENST00000542576.5
CDS-3UTR GCA 90 bp TATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGAATCGCCCTTGGTTTTAATTaGTTGGAGGGCATCAAGTAC +
Preference number: 4 (lower is better)
Translates to: YVRSRAVFLRKDKFLLRIALGFN*LEGIKY
Trigger: GTACTTGATGCCCTCCAAGCAATTAAAACCAAGGGC...GATTCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431316.3
ENST00000521679.5
ENST00000523022.6
ENST00000523953.5
ENST00000542576.5
CDS-3UTR GCA 90 bp TTATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGAATCATTTGATAGAAGGCTaGGGAATTGTGCCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: LCQKQGCVLEEGQVSSQNHLIEG*GIVPAA
Trigger: AGCAGCTGGCACAATTCCGCAGCCTTCTATCAAATG...ATTCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000431316.3
ENST00000522389.5
ENST00000523022.6
ENST00000523953.5
ENST00000542576.5
ENST00000626824.1
CDS-3UTR CCA 90 bp TATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGAATCGATCAGCCTACAGGATaGAACAAAATAGGTCCTCCT +
Preference number: 4 (lower is better)
Translates to: YVRSRAVFLRKDKFLLRIDQPTG*NKIGPP
Trigger: AGGAGGACCTATTTTGTTCCATCCTGTAGGCTGATC...GATTCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431316.3
CDS-3UTR CCA 90 bp GATTATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGATTCTTTGGCTGTGGCTaGGTTGTAGGAGACACTAAT +
Preference number: 4 (lower is better)
Translates to: DYVRSRAVFLRKDKFLLRFFGCG*VVGDTN
Trigger: ATTAGTGTCTCCTACAACCCAGCCACAGCCAAAGAA...TCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000431316.3
ENST00000523022.6
ENST00000523953.5
ENST00000542576.5
CDS-3UTR CCA 90 bp TATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGAATCTTCTTTGGCTGTGGCTaGGTTGTAGGAGACACTAAT +
Preference number: 4 (lower is better)
Translates to: YVRSRAVFLRKDKFLLRIFFGCG*VVGDTN
Trigger: ATTAGTGTCTCCTACAACCCAGCCACAGCCAAAGAA...GATTCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000431316.3
ENST00000523022.6
ENST00000523953.5
ENST00000542576.5
CDS-3UTR CCA 90 bp TTATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGAATCAGCTTCAGCAAGGCTaGAGTACTTTGCAGAATTCC +
Preference number: 4 (lower is better)
Translates to: LCQKQGCVLEEGQVSSQNQLQQG*STLQNS
Trigger: GGAATTCTGCAAAGTACTCCAGCCTTGCTGAAGCTG...ATTCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000431316.3
ENST00000521679.5
ENST00000522389.5
ENST00000523022.6
ENST00000523953.5
ENST00000542576.5
ENST00000626824.1
CDS-3UTR CCA 90 bp TATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGAATCTTGTCCTTGCTAACGTaGGGAGAAGAAGTGAAAGCA +
Preference number: 4 (lower is better)
Translates to: YVRSRAVFLRKDKFLLRILSLLT*GEEVKA
Trigger: TGCTTTCACTTCTTCTCCCCACGTTAGCAAGGACAA...GATTCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000523022.6
ENST00000523953.5
ENST00000626824.1
CDS-3UTR CCA 90 bp GATTATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGATTGTCCTTGCTAACGTaGGGAGAAGAAGTGAAAGCA +
Preference number: 4 (lower is better)
Translates to: DYVRSRAVFLRKDKFLLRLSLLT*GEEVKA
Trigger: TGCTTTCACTTCTTCTCCCCACGTTAGCAAGGACAA...TCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000523022.6
ENST00000523953.5
ENST00000626824.1
CDS-3UTR TCA 90 bp TATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGAATCTGCTCTCCTTACAGATaGTCCAAGTTACACTCTCAT +
Preference number: 4 (lower is better)
Translates to: YVRSRAVFLRKDKFLLRICSPYR*SKLHSH
Trigger: ATGAGAGTGTAACTTGGATCATCTGTAAGGAGAGCA...GATTCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000431316.3
ENST00000521679.5
ENST00000522389.5
ENST00000523022.6
ENST00000523953.5
ENST00000542576.5
ENST00000626824.1
CDS-3UTR TCA 90 bp GATTATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGATGCTCTCCTTACAGATaGTCCAAGTTACACTCTCAT +
Preference number: 4 (lower is better)
Translates to: DYVRSRAVFLRKDKFLLRCSPYR*SKLHSH
Trigger: ATGAGAGTGTAACTTGGATCATCTGTAAGGAGAGCA...TCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATAATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000431316.3
ENST00000521679.5
ENST00000522389.5
ENST00000523022.6
ENST00000523953.5
ENST00000542576.5
ENST00000626824.1
CDS-3UTR TCA 90 bp TTATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGAATGTTAGAATGACCTCTTaGTTGGTGGTGTTAACCCAC +
Preference number: 4 (lower is better)
Translates to: LCQKQGCVLEEGQVSSQNVRMTS*LVVLTH
Trigger: GTGGGTTAACACCACCAATCAAGAGGTCATTCTAAC...ATTCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000523953.5
ENST00000626824.1
CDS-3UTR TCA 90 bp TTATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGAATGGCTTTCTGTTAGAATaGCCTCTTGATTGGTGGTGT +
Preference number: 4 (lower is better)
Translates to: LCQKQGCVLEEGQVSSQNGFLLE*PLDWWC
Trigger: ACACCACCAATCAAGAGGTCATTCTAACAGAAAGCC...ATTCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000523953.5
ENST00000626824.1
CDS-3UTR GCA 90 bp TTATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGAATTCCCCAGTCTGGACTTaGCATTATCTTCTACTGAGT +
Preference number: 4 (lower is better)
Translates to: LCQKQGCVLEEGQVSSQNSPVWT*HYLLLS
Trigger: ACTCAGTAGAAGATAATGGCAAGTCCAGACTGGGGA...ATTCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000431316.3
ENST00000522389.5
ENST00000523022.6
ENST00000523953.5
ENST00000542576.5
ENST00000626824.1
CDS-3UTR GCA 90 bp TTATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGAATCAATGGGATACAGCTTaGTCCATTGTTCAGGACCAT +
Preference number: 4 (lower is better)
Translates to: LCQKQGCVLEEGQVSSQNQWDTA*SIVQDH
Trigger: ATGGTCCTGAACAATGGAGCAAGCTGTATCCCATTG...ATTCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000431316.3
ENST00000523022.6
ENST00000523953.5
ENST00000542576.5
CDS-3UTR GCA 90 bp TTATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGAATGTATGTTCTGAACCATaGTCATTTGTACTGCCCCAG +
Preference number: 4 (lower is better)
Translates to: LCQKQGCVLEEGQVSSQNVCSEP*SFVLPQ
Trigger: CTGGGGCAGTACAAATGAGCATGGTTCAGAACATAC...ATTCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431316.3
ENST00000521679.5
ENST00000523022.6
ENST00000523953.5
ENST00000542576.5
CDS-3UTR GCA 90 bp TTATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGAATAAGGCTGGAGTACTTTaGAGAATTCCAGTGAGCTAC +
Preference number: 4 (lower is better)
Translates to: LCQKQGCVLEEGQVSSQNKAGVL*RIPVSY
Trigger: GTAGCTCACTGGAATTCTGCAAAGTACTCCAGCCTT...ATTCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000431316.3
ENST00000521679.5
ENST00000522389.5
ENST00000523022.6
ENST00000523953.5
ENST00000542576.5
ENST00000626824.1
CDS-3UTR GCA 90 bp TTATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGAATGCCCTTGGTTTTAATTaGTTGGAGGGCATCAAGTAC +
Preference number: 4 (lower is better)
Translates to: LCQKQGCVLEEGQVSSQNALGFN*LEGIKY
Trigger: GTACTTGATGCCCTCCAAGCAATTAAAACCAAGGGC...ATTCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431316.3
ENST00000521679.5
ENST00000523022.6
ENST00000523953.5
ENST00000542576.5
CDS-3UTR GCA 90 bp GATTATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGAGTGGATTTAATCAGCTaGTCAAGAGAGGAAACTGAC +
Preference number: 4 (lower is better)
Translates to: DYVRSRAVFLRKDKFLLRVDLIS*SREETD
Trigger: GTCAGTTTCCTCTCTTGAGCAGCTGATTAAATCCAC...TCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATAATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000523953.5
ENST00000626824.1
CDS-3UTR CCA 90 bp TATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGAATCACTGGTTATTTCCATTaGCAATGGGATACAGCTTGC +
Preference number: 4 (lower is better)
Translates to: YVRSRAVFLRKDKFLLRITGYFH*QWDTAC
Trigger: GCAAGCTGTATCCCATTGCCAATGGAAATAACCAGT...GATTCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000431316.3
ENST00000523022.6
ENST00000523953.5
ENST00000542576.5
CDS-3UTR CCA 90 bp AGTACTTTCTGCAGCTTTGGGTTGGCCTCACCAACCTTCATCAAAACACCAATAACTGGTTATTTCCATTaGCAATGGGATACAGCTTGC +
Preference number: 4 (lower is better)
Translates to: STFCSFGLASPTFIKTPITGYFH*QWDTAC
Trigger: GCAAGCTGTATCCCATTGCCAATGGAAATAACCAGT...TATTGGTGTTTTGATGAAGGTTGGTGAGGCCAACCCAAAGCTGCAGAAAGTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517429.5
CDS-3UTR CCA 90 bp TTATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGAATTTCTTTGGCTGTGGCTaGGTTGTAGGAGACACTAAT +
Preference number: 4 (lower is better)
Translates to: LCQKQGCVLEEGQVSSQNFFGCG*VVGDTN
Trigger: ATTAGTGTCTCCTACAACCCAGCCACAGCCAAAGAA...ATTCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000431316.3
ENST00000523022.6
ENST00000523953.5
ENST00000542576.5
CDS-3UTR TCA 90 bp TATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGAATCATCCACTGTATGTTCTaGACCATGCTCATTTGTACT +
Preference number: 4 (lower is better)
Translates to: YVRSRAVFLRKDKFLLRIIHCMF*TMLICT
Trigger: AGTACAAATGAGCATGGTTCAGAACATACAGTGGAT...GATTCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431316.3
ENST00000521679.5
ENST00000523022.6
ENST00000523953.5
ENST00000542576.5
CDS-3UTR TCA 90 bp GATTATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGAATCCACTGTATGTTCTaGACCATGCTCATTTGTACT +
Preference number: 4 (lower is better)
Translates to: DYVRSRAVFLRKDKFLLRIHCMF*TMLICT
Trigger: AGTACAAATGAGCATGGTTCAGAACATACAGTGGAT...TCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATAATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431316.3
ENST00000521679.5
ENST00000523022.6
ENST00000523953.5
ENST00000542576.5
CDS-3UTR TCA 90 bp TTATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGAATTGCTCTCCTTACAGATaGTCCAAGTTACACTCTCAT +
Preference number: 4 (lower is better)
Translates to: LCQKQGCVLEEGQVSSQNCSPYR*SKLHSH
Trigger: ATGAGAGTGTAACTTGGATCATCTGTAAGGAGAGCA...ATTCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000431316.3
ENST00000521679.5
ENST00000522389.5
ENST00000523022.6
ENST00000523953.5
ENST00000542576.5
ENST00000626824.1
CDS-3UTR GCA 90 bp ACACAAATGGTAGCAATGTTGGGCCAGCATAACGATATTAAATCCAGTGGTCATAAGGCTGGAGTACTTTaGAGAATTCCAGTGAGCTAC +
Preference number: 4 (lower is better)
Translates to: TQMVAMLGQHNDIKSSGHKAGVL*RIPVSY
Trigger: GTAGCTCACTGGAATTCTGCAAAGTACTCCAGCCTT...ATGACCACTGGATTTAATATCGTTATGCTGGCCCAACATTGCTACCATTTGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000523022.6
ENST00000523953.5
ENST00000626824.1
CDS-3UTR GCA 90 bp ACACAAATGGTAGCAATGTTGGGCCAGCATAACGATATTAAATCCAGTGGTCATGCCCTTGGTTTTAATTaGTTGGAGGGCATCAAGTAC +
Preference number: 4 (lower is better)
Translates to: TQMVAMLGQHNDIKSSGHALGFN*LEGIKY
Trigger: GTACTTGATGCCCTCCAAGCAATTAAAACCAAGGGC...ATGACCACTGGATTTAATATCGTTATGCTGGCCCAACATTGCTACCATTTGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000523022.6
ENST00000523953.5
CDS-3UTR GCA 90 bp TTATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGAATGTGGATTTAATCAGCTaGTCAAGAGAGGAAACTGAC +
Preference number: 4 (lower is better)
Translates to: LCQKQGCVLEEGQVSSQNVDLIS*SREETD
Trigger: GTCAGTTTCCTCTCTTGAGCAGCTGATTAAATCCAC...ATTCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000523953.5
ENST00000626824.1
CDS-3UTR CCA 90 bp TATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGAATCATCATATCCCCAGTCTaGACTTGCCATTATCTTCTA +
Preference number: 4 (lower is better)
Translates to: YVRSRAVFLRKDKFLLRIIISPV*TCHYLL
Trigger: TAGAAGATAATGGCAAGTCCAGACTGGGGATATGAT...GATTCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000431316.3
ENST00000522389.5
ENST00000523022.6
ENST00000523953.5
ENST00000542576.5
ENST00000626824.1
CDS-3UTR CCA 90 bp GATTATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGAATCATATCCCCAGTCTaGACTTGCCATTATCTTCTA +
Preference number: 4 (lower is better)
Translates to: DYVRSRAVFLRKDKFLLRIISPV*TCHYLL
Trigger: TAGAAGATAATGGCAAGTCCAGACTGGGGATATGAT...TCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000431316.3
ENST00000522389.5
ENST00000523022.6
ENST00000523953.5
ENST00000542576.5
ENST00000626824.1
CDS-3UTR CCA 90 bp GATTATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGATATTTCCATTGGCAATaGGATACAGCTTGCTCCATT +
Preference number: 4 (lower is better)
Translates to: DYVRSRAVFLRKDKFLLRYFHWQ*DTACSI
Trigger: AATGGAGCAAGCTGTATCCCATTGCCAATGGAAATA...TCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATAATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000431316.3
ENST00000523022.6
ENST00000523953.5
ENST00000542576.5
CDS-3UTR CCA 90 bp TATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGAATCTATTTCCATTGGCAATaGGATACAGCTTGCTCCATT +
Preference number: 4 (lower is better)
Translates to: YVRSRAVFLRKDKFLLRIYFHWQ*DTACSI
Trigger: AATGGAGCAAGCTGTATCCCATTGCCAATGGAAATA...GATTCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000431316.3
ENST00000523022.6
ENST00000523953.5
ENST00000542576.5
CDS-3UTR CCA 90 bp TTATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGAATACTGGTTATTTCCATTaGCAATGGGATACAGCTTGC +
Preference number: 4 (lower is better)
Translates to: LCQKQGCVLEEGQVSSQNTGYFH*QWDTAC
Trigger: GCAAGCTGTATCCCATTGCCAATGGAAATAACCAGT...ATTCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000431316.3
ENST00000523022.6
ENST00000523953.5
ENST00000542576.5
CDS-3UTR CCA 90 bp GATTATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGAATATCAACAGGGGACTaGTTATTTCCATTGGCAATG +
Preference number: 4 (lower is better)
Translates to: DYVRSRAVFLRKDKFLLRISTGD*LFPLAM
Trigger: CATTGCCAATGGAAATAACCAGTCCCCTGTTGATAT...TCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000431316.3
ENST00000523022.6
ENST00000523953.5
ENST00000542576.5
CDS-3UTR CCA 90 bp TTCATCAAAACACCAATAACTGCCAAACCATCAGCCTTTGAGGCAGCTTCAGCATCCTCAAAATTTACATaGAAGGAATGCCCCACATTG +
Preference number: 4 (lower is better)
Translates to: FIKTPITAKPSAFEAASASSKFT*KECPTL
Trigger: CAATGTGGGGCATTCCTTCCATGTAAATTTTGAGGA...TGCTGAAGCTGCCTCAAAGGCTGATGGTTTGGCAGTTATTGGTGTTTTGATGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000517429.5
CDS-3UTR CCA 90 bp GATTATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGATCCTCAAAATTTACATaGAAGGAATGCCCCACATTG +
Preference number: 4 (lower is better)
Translates to: DYVRSRAVFLRKDKFLLRSSKFT*KECPTL
Trigger: CAATGTGGGGCATTCCTTCCATGTAAATTTTGAGGA...TCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000431316.3
ENST00000523022.6
ENST00000523953.5
ENST00000542576.5
CDS-3UTR CCA 90 bp TATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGAATCTTTTCACTACCTCTGTaGAAAACAGCTCTGAATGAG +
Preference number: 4 (lower is better)
Translates to: YVRSRAVFLRKDKFLLRIFSLPL*KTALNE
Trigger: CTCATTCAGAGCTGTTTTCCACAGAGGTAGTGAAAA...GATTCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000523953.5
ENST00000626824.1
CDS-3UTR CCA 90 bp ACACAAATGGTAGCAATGTTGGGCCAGCATAACGATATTAAATCCAGTGGTCATTTGTCCTTGCTAACGTaGGGAGAAGAAGTGAAAGCA +
Preference number: 4 (lower is better)
Translates to: TQMVAMLGQHNDIKSSGHLSLLT*GEEVKA
Trigger: TGCTTTCACTTCTTCTCCCCACGTTAGCAAGGACAA...ATGACCACTGGATTTAATATCGTTATGCTGGCCCAACATTGCTACCATTTGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000523022.6
ENST00000523953.5
ENST00000626824.1
CDS-3UTR CCA 90 bp TATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGAATCTTTGCCAAAGCTCCCTaGTTTAGCAGGACTAATATT +
Preference number: 4 (lower is better)
Translates to: YVRSRAVFLRKDKFLLRIFAKAP*FSRTNI
Trigger: AATATTAGTCCTGCTAAACCAGGGAGCTTTGGCAAA...GATTCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000523953.5
ENST00000626824.1
3UTR CAA 72 bp CTAACTAGTTGTAATAATGGCAGAGAAGCATTGTCCTaGCTAACGTGGGGAGAAGAAGTGAAAGCAATATCC +
Preference number: 4 (lower is better)
Translates to: LTSCNNGREALS*LTWGEEVKAIS
Trigger: GGATATTGCTTTCACTTCTTCTCCCCACGTTAGCAAGGACAATGCTTCTCTGCCATTATTACAACTAGTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000523022.6
ENST00000523953.5
ENST00000626824.1
3UTR CAA 72 bp TGCAAACTAACTAGTTGTAATAATGGCAGAGAAGCATaGTCCTTGCTAACGTGGGGAGAAGAAGTGAAAGCA +
Preference number: 4 (lower is better)
Translates to: CKLTSCNNGREA*SLLTWGEEVKA
Trigger: TGCTTTCACTTCTTCTCCCCACGTTAGCAAGGACAATGCTTCTCTGCCATTATTACAACTAGTTAGTTTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000523022.6
ENST00000523953.5
ENST00000626824.1
CDS-3UTR TCA 90 bp TTATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGAATATCCACTGTATGTTCTaGACCATGCTCATTTGTACT +
Preference number: 4 (lower is better)
Translates to: LCQKQGCVLEEGQVSSQNIHCMF*TMLICT
Trigger: AGTACAAATGAGCATGGTTCAGAACATACAGTGGAT...ATTCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431316.3
ENST00000521679.5
ENST00000523022.6
ENST00000523953.5
ENST00000542576.5
CDS-3UTR TCA 90 bp ACACAAATGGTAGCAATGTTGGGCCAGCATAACGATATTAAATCCAGTGGTCATTGCTCTCCTTACAGATaGTCCAAGTTACACTCTCAT +
Preference number: 4 (lower is better)
Translates to: TQMVAMLGQHNDIKSSGHCSPYR*SKLHSH
Trigger: ATGAGAGTGTAACTTGGATCATCTGTAAGGAGAGCA...ATGACCACTGGATTTAATATCGTTATGCTGGCCCAACATTGCTACCATTTGTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000523022.6
ENST00000523953.5
ENST00000626824.1
CDS-3UTR TCA 90 bp GATTATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGATTTTACAGATTGATTTaGAGGCATGCTGTCTTGCTA +
Preference number: 4 (lower is better)
Translates to: DYVRSRAVFLRKDKFLLRFYRLI*RHAVLL
Trigger: TAGCAAGACAGCATGCCTTCAAATCAATCTGTAAAA...TCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431316.3
ENST00000523022.6
ENST00000523953.5
ENST00000542576.5
ENST00000626824.1
CDS-3UTR TCA 90 bp TATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGAATCTTTTACAGATTGATTTaGAGGCATGCTGTCTTGCTA +
Preference number: 4 (lower is better)
Translates to: YVRSRAVFLRKDKFLLRIFYRLI*RHAVLL
Trigger: TAGCAAGACAGCATGCCTTCAAATCAATCTGTAAAA...GATTCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431316.3
ENST00000523022.6
ENST00000523953.5
ENST00000542576.5
ENST00000626824.1
CDS-3UTR TCA 90 bp TATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGAATCAAAAATAGCATAAGGTaGAGCGCACATCTGACTAAA +
Preference number: 4 (lower is better)
Translates to: YVRSRAVFLRKDKFLLRIKNSIR*SAHLTK
Trigger: TTTAGTCAGATGTGCGCTTCACCTTATGCTATTTTT...GATTCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000523022.6
ENST00000523953.5
ENST00000626824.1
CDS-3UTR TCA 90 bp GATTATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGAAAAAATAGCATAAGGTaGAGCGCACATCTGACTAAA +
Preference number: 4 (lower is better)
Translates to: DYVRSRAVFLRKDKFLLRKNSIR*SAHLTK
Trigger: TTTAGTCAGATGTGCGCTTCACCTTATGCTATTTTT...TCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATAATC
41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000523022.6
ENST00000523953.5
ENST00000626824.1
CDS-3UTR CCA 90 bp TTATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGAATATCATATCCCCAGTCTaGACTTGCCATTATCTTCTA +
Preference number: 4 (lower is better)
Translates to: LCQKQGCVLEEGQVSSQNIISPV*TCHYLL
Trigger: TAGAAGATAATGGCAAGTCCAGACTGGGGATATGAT...ATTCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000431316.3
ENST00000522389.5
ENST00000523022.6
ENST00000523953.5
ENST00000542576.5
ENST00000626824.1
CDS-3UTR CCA 90 bp TTATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGAATTATTTCCATTGGCAATaGGATACAGCTTGCTCCATT +
Preference number: 4 (lower is better)
Translates to: LCQKQGCVLEEGQVSSQNYFHWQ*DTACSI
Trigger: AATGGAGCAAGCTGTATCCCATTGCCAATGGAAATA...ATTCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000431316.3
ENST00000523022.6
ENST00000523953.5
ENST00000542576.5
CDS-3UTR CCA 90 bp ACACAAATGGTAGCAATGTTGGGCCAGCATAACGATATTAAATCCAGTGGTCATACTGGTTATTTCCATTaGCAATGGGATACAGCTTGC +
Preference number: 4 (lower is better)
Translates to: TQMVAMLGQHNDIKSSGHTGYFH*QWDTAC
Trigger: GCAAGCTGTATCCCATTGCCAATGGAAATAACCAGT...ATGACCACTGGATTTAATATCGTTATGCTGGCCCAACATTGCTACCATTTGTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000523022.6
ENST00000523953.5
CDS-3UTR CCA 90 bp TTATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGAATATATCAACAGGGGACTaGTTATTTCCATTGGCAATG +
Preference number: 4 (lower is better)
Translates to: LCQKQGCVLEEGQVSSQNISTGD*LFPLAM
Trigger: CATTGCCAATGGAAATAACCAGTCCCCTGTTGATAT...ATTCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000431316.3
ENST00000523022.6
ENST00000523953.5
ENST00000542576.5
CDS-3UTR CCA 90 bp TTATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGAATTCCTCAAAATTTACATaGAAGGAATGCCCCACATTG +
Preference number: 4 (lower is better)
Translates to: LCQKQGCVLEEGQVSSQNSSKFT*KECPTL
Trigger: CAATGTGGGGCATTCCTTCCATGTAAATTTTGAGGA...ATTCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000431316.3
ENST00000523022.6
ENST00000523953.5
ENST00000542576.5
CDS-3UTR CCA 90 bp GATTATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGATTGGTTTTAATTGCTTaGAGGGCATCAAGTACTTTC +
Preference number: 4 (lower is better)
Translates to: DYVRSRAVFLRKDKFLLRLVLIA*RASSTF
Trigger: GAAAGTACTTGATGCCCTCCAAGCAATTAAAACCAA...TCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431316.3
ENST00000521679.5
ENST00000523022.6
ENST00000523953.5
ENST00000542576.5
CDS-3UTR CCA 90 bp TATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGAATCTTGGTTTTAATTGCTTaGAGGGCATCAAGTACTTTC +
Preference number: 4 (lower is better)
Translates to: YVRSRAVFLRKDKFLLRILVLIA*RASSTF
Trigger: GAAAGTACTTGATGCCCTCCAAGCAATTAAAACCAA...GATTCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431316.3
ENST00000521679.5
ENST00000523022.6
ENST00000523953.5
ENST00000542576.5
CDS-3UTR CCA 90 bp TTATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGAATTTTGCCAAAGCTCCCTaGTTTAGCAGGACTAATATT +
Preference number: 4 (lower is better)
Translates to: LCQKQGCVLEEGQVSSQNFAKAP*FSRTNI
Trigger: AATATTAGTCCTGCTAAACCAGGGAGCTTTGGCAAA...ATTCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000523953.5
ENST00000626824.1
CDS-3UTR TCA 90 bp TTATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGAATTTTTACAGATTGATTTaGAGGCATGCTGTCTTGCTA +
Preference number: 4 (lower is better)
Translates to: LCQKQGCVLEEGQVSSQNFYRLI*RHAVLL
Trigger: TAGCAAGACAGCATGCCTTCAAATCAATCTGTAAAA...ATTCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000431316.3
ENST00000523022.6
ENST00000523953.5
ENST00000542576.5
ENST00000626824.1
CDS-3UTR TCA 90 bp TTATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGAATCCTTTAGTCATATTTTaGCTGGATTTCAGAGTGTGT +
Preference number: 4 (lower is better)
Translates to: LCQKQGCVLEEGQVSSQNPLVIF*LDFRVC
Trigger: ACACACTCTGAAATCCAGTCAAAATATGACTAAAGG...ATTCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000523953.5
ENST00000626824.1
CDS-3UTR GCA 90 bp GATTATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGATTTACATGGAAGGAATaGCCCACATTGATAATTTCT +
Preference number: 4 (lower is better)
Translates to: DYVRSRAVFLRKDKFLLRFTWKE*PTLIIS
Trigger: AGAAATTATCAATGTGGGGCATTCCTTCCATGTAAA...TCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATAATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000431316.3
ENST00000523022.6
ENST00000523953.5
ENST00000542576.5
CDS-3UTR GCA 90 bp AGTGAAAATGGAACTGAAAGAGCCTGTAGCTGTCAGAGAAAGGACCACCTTTCATTTACATGGAAGGAATaGCCCACATTGATAATTTCT +
Preference number: 4 (lower is better)
Translates to: SENGTERACSCQRKDHLSFTWKE*PTLIIS
Trigger: AGAAATTATCAATGTGGGGCATTCCTTCCATGTAAA...TGAAAGGTGGTCCTTTCTCTGACAGCTACAGGCTCTTTCAGTTCCATTTTCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517429.5
CDS-3UTR GCA 90 bp TATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGAATCTTTACATGGAAGGAATaGCCCACATTGATAATTTCT +
Preference number: 4 (lower is better)
Translates to: YVRSRAVFLRKDKFLLRIFTWKE*PTLIIS
Trigger: AGAAATTATCAATGTGGGGCATTCCTTCCATGTAAA...GATTCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000431316.3
ENST00000523022.6
ENST00000523953.5
ENST00000542576.5
CDS-3UTR CCA 90 bp TTATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGAATTTGGTTTTAATTGCTTaGAGGGCATCAAGTACTTTC +
Preference number: 4 (lower is better)
Translates to: LCQKQGCVLEEGQVSSQNLVLIA*RASSTF
Trigger: GAAAGTACTTGATGCCCTCCAAGCAATTAAAACCAA...ATTCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431316.3
ENST00000521679.5
ENST00000523022.6
ENST00000523953.5
ENST00000542576.5
CDS-3UTR CCA 90 bp ACACAAATGGTAGCAATGTTGGGCCAGCATAACGATATTAAATCCAGTGGTCATTTTTCACTACCTCTGTaGAAAACAGCTCTGAATGAG +
Preference number: 4 (lower is better)
Translates to: TQMVAMLGQHNDIKSSGHFSLPL*KTALNE
Trigger: CTCATTCAGAGCTGTTTTCCACAGAGGTAGTGAAAA...ATGACCACTGGATTTAATATCGTTATGCTGGCCCAACATTGCTACCATTTGTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000523953.5
ENST00000626824.1
CDS-3UTR TCA 90 bp ACACAAATGGTAGCAATGTTGGGCCAGCATAACGATATTAAATCCAGTGGTCATTTTTACAGATTGATTTaGAGGCATGCTGTCTTGCTA +
Preference number: 4 (lower is better)
Translates to: TQMVAMLGQHNDIKSSGHFYRLI*RHAVLL
Trigger: TAGCAAGACAGCATGCCTTCAAATCAATCTGTAAAA...ATGACCACTGGATTTAATATCGTTATGCTGGCCCAACATTGCTACCATTTGTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000523022.6
ENST00000523953.5
ENST00000626824.1
CDS-3UTR TCA 90 bp ACACAAATGGTAGCAATGTTGGGCCAGCATAACGATATTAAATCCAGTGGTCATAAAAATAGCATAAGGTaGAGCGCACATCTGACTAAA +
Preference number: 4 (lower is better)
Translates to: TQMVAMLGQHNDIKSSGHKNSIR*SAHLTK
Trigger: TTTAGTCAGATGTGCGCTTCACCTTATGCTATTTTT...ATGACCACTGGATTTAATATCGTTATGCTGGCCCAACATTGCTACCATTTGTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000523022.6
ENST00000523953.5
ENST00000626824.1
CDS-3UTR TCA 90 bp ACACAAATGGTAGCAATGTTGGGCCAGCATAACGATATTAAATCCAGTGGTCATCCTTTAGTCATATTTTaGCTGGATTTCAGAGTGTGT +
Preference number: 4 (lower is better)
Translates to: TQMVAMLGQHNDIKSSGHPLVIF*LDFRVC
Trigger: ACACACTCTGAAATCCAGTCAAAATATGACTAAAGG...ATGACCACTGGATTTAATATCGTTATGCTGGCCCAACATTGCTACCATTTGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000523953.5
ENST00000626824.1
CDS-3UTR GCA 90 bp TTATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGAATTTTACATGGAAGGAATaGCCCACATTGATAATTTCT +
Preference number: 4 (lower is better)
Translates to: LCQKQGCVLEEGQVSSQNFTWKE*PTLIIS
Trigger: AGAAATTATCAATGTGGGGCATTCCTTCCATGTAAA...ATTCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000431316.3
ENST00000523022.6
ENST00000523953.5
ENST00000542576.5
CDS-3UTR CAA 90 bp TACTGCCCCAGTGAAAATGGAACTGAAAGAGCCTGTAGCTGTCAGAGAAAGGACGGACCACGCAGGGGGTaGCACCTGAGGACTGGGTAC +
Preference number: 5 (lower is better)
Translates to: YCPSENGTERACSCQRKDGPRRG*HLRTGY
Trigger: GTACCCAGTCCTCAGGTGCAACCCCCTGCGTGGTCC...GTCCTTTCTCTGACAGCTACAGGCTCTTTCAGTTCCATTTTCACTGGGGCAGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000517429.5
CDS CCA 90 bp CTGTTCTGCCCTTCAGAGGTTGGGTTGGGCGGTTGTTGTGCTGCATaGGGACAGCGTTATCACCTTCAACATTTGATAGAAGGCTGCGGA +
Preference number: 5 (lower is better)
Translates to: LFCPSEVGLGGCCAA*GQRYHLQHLIEGCG
Trigger: TCCGCAGCCTTCTATCAAATGTTGAAGGTGATAACGCTGTCCCCATGCAGCACAACAACCGCCCAACCCAACCTCTGAAGGGCAGAACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000431316.3
ENST00000522389.5
ENST00000523022.6
ENST00000523953.5
ENST00000524324.5
ENST00000542576.5
ENST00000626824.1
CDS-3UTR CAA 90 bp TATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGAATCGGACCACGCAGGGGGTaGCACCTGAGGACTGGGTAC +
Preference number: 5 (lower is better)
Translates to: YVRSRAVFLRKDKFLLRIGPRRG*HLRTGY
Trigger: GTACCCAGTCCTCAGGTGCAACCCCCTGCGTGGTCC...GATTCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000523022.6
ENST00000523953.5
ENST00000626824.1
CDS-3UTR CAA 90 bp GATTATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGAGGACCACGCAGGGGGTaGCACCTGAGGACTGGGTAC +
Preference number: 5 (lower is better)
Translates to: DYVRSRAVFLRKDKFLLRGPRRG*HLRTGY
Trigger: GTACCCAGTCCTCAGGTGCAACCCCCTGCGTGGTCC...TCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATAATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000523022.6
ENST00000523953.5
ENST00000626824.1
CDS GCA 90 bp CTCACTGTTCTGCCCTTCAGAGGTTGGGTTGGGCGGTTGTTGTGCTaGATGGGGACAGCGTTATCACCTTCAACATTTGATAGAAGGCTG +
Preference number: 5 (lower is better)
Translates to: LTVLPFRGWVGRLLC*MGTALSPSTFDRRL
Trigger: CAGCCTTCTATCAAATGTTGAAGGTGATAACGCTGTCCCCATGCAGCACAACAACCGCCCAACCCAACCTCTGAAGGGCAGAACAGTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000431316.3
ENST00000522389.5
ENST00000523022.6
ENST00000523953.5
ENST00000524324.5
ENST00000542576.5
ENST00000626824.1
CDS GCA 90 bp GCTCTCACTGTTCTGCCCTTCAGAGGTTGGGTTGGGCGGTTGTTGTaGTGCATGGGGACAGCGTTATCACCTTCAACATTTGATAGAAGG +
Preference number: 5 (lower is better)
Translates to: ALTVLPFRGWVGRLL*CMGTALSPSTFDRR
Trigger: CCTTCTATCAAATGTTGAAGGTGATAACGCTGTCCCCATGCAGCACAACAACCGCCCAACCCAACCTCTGAAGGGCAGAACAGTGAGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000431316.3
ENST00000522389.5
ENST00000523022.6
ENST00000523953.5
ENST00000524324.5
ENST00000542576.5
ENST00000626824.1
CDS-3UTR CAA 90 bp TATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGAATCTGGGTTGGGCGGTTGTaGTGCTGCATGGGGACAGCG +
Preference number: 5 (lower is better)
Translates to: YVRSRAVFLRKDKFLLRIWVGRL*CCMGTA
Trigger: CGCTGTCCCCATGCAGCACAACAACCGCCCAACCCA...GATTCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000431316.3
ENST00000522389.5
ENST00000523022.6
ENST00000523953.5
ENST00000542576.5
ENST00000626824.1
CDS-3UTR CAA 90 bp GATTATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGATGGGTTGGGCGGTTGTaGTGCTGCATGGGGACAGCG +
Preference number: 5 (lower is better)
Translates to: DYVRSRAVFLRKDKFLLRWVGRL*CCMGTA
Trigger: CGCTGTCCCCATGCAGCACAACAACCGCCCAACCCA...TCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000431316.3
ENST00000522389.5
ENST00000523022.6
ENST00000523953.5
ENST00000542576.5
ENST00000626824.1
CDS CCA 90 bp CAGAATCATCAAAATGAAGCTCTCACTGTTCTGCCCTTCAGAGGTTaGGTTGGGCGGTTGTTGTGCTGCATGGGGACAGCGTTATCACCT +
Preference number: 5 (lower is better)
Translates to: QNHQNEALTVLPFRG*VGRLLCCMGTALSP
Trigger: AGGTGATAACGCTGTCCCCATGCAGCACAACAACCGCCCAACCCAACCTCTGAAGGGCAGAACAGTGAGAGCTTCATTTTGATGATTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000431316.3
ENST00000522389.5
ENST00000523022.6
ENST00000523953.5
ENST00000542576.5
ENST00000626824.1
CDS-3UTR CAA 90 bp CCTGTAGCTGTCAGAGAAAGGACCACCTTTCAGCACACCTGGGCGTTTTCCAGACAAGGCTGGAGTACTTaGCAGAATTCCAGTGAGCTA +
Preference number: 5 (lower is better)
Translates to: PVAVRERTTFQHTWAFSRQGWST*QNSSEL
Trigger: TAGCTCACTGGAATTCTGCAAAGTACTCCAGCCTTG...TCTGGAAAACGCCCAGGTGTGCTGAAAGGTGGTCCTTTCTCTGACAGCTACAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517429.5
CDS-3UTR CAA 90 bp TACTGCCCCAGTGAAAATGGAACTGAAAGAGCCTGTAGCTGTCAGAGAAAGGACCCAAACCATCAGCCTTaGAGGCAGCTTCAGCAAGGC +
Preference number: 5 (lower is better)
Translates to: YCPSENGTERACSCQRKDPNHQP*RQLQQG
Trigger: GCCTTGCTGAAGCTGCCTCAAAGGCTGATGGTTTGG...GTCCTTTCTCTGACAGCTACAGGCTCTTTCAGTTCCATTTTCACTGGGGCAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517429.5
CDS-3UTR CAA 90 bp TTATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGAATTGGGTTGGGCGGTTGTaGTGCTGCATGGGGACAGCG +
Preference number: 5 (lower is better)
Translates to: LCQKQGCVLEEGQVSSQNWVGRL*CCMGTA
Trigger: CGCTGTCCCCATGCAGCACAACAACCGCCCAACCCA...ATTCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000431316.3
ENST00000522389.5
ENST00000523022.6
ENST00000523953.5
ENST00000542576.5
ENST00000626824.1
CDS-3UTR CAA 90 bp TATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGAATCGGTTGGGTTGGGCGGTaGTTGTGCTGCATGGGGACA +
Preference number: 5 (lower is better)
Translates to: YVRSRAVFLRKDKFLLRIGWVGR*LCCMGT
Trigger: TGTCCCCATGCAGCACAACAACCGCCCAACCCAACC...GATTCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000431316.3
ENST00000522389.5
ENST00000523022.6
ENST00000523953.5
ENST00000542576.5
ENST00000626824.1
CDS-3UTR CAA 90 bp GATTATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGAGGTTGGGTTGGGCGGTaGTTGTGCTGCATGGGGACA +
Preference number: 5 (lower is better)
Translates to: DYVRSRAVFLRKDKFLLRGWVGR*LCCMGT
Trigger: TGTCCCCATGCAGCACAACAACCGCCCAACCCAACC...TCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000431316.3
ENST00000522389.5
ENST00000523022.6
ENST00000523953.5
ENST00000542576.5
ENST00000626824.1
CDS-3UTR CAA 90 bp ACACAAATGGTAGCAATGTTGGGCCAGCATAACGATATTAAATCCAGTGGTCATGGACCACGCAGGGGGTaGCACCTGAGGACTGGGTAC +
Preference number: 5 (lower is better)
Translates to: TQMVAMLGQHNDIKSSGHGPRRG*HLRTGY
Trigger: GTACCCAGTCCTCAGGTGCAACCCCCTGCGTGGTCC...ATGACCACTGGATTTAATATCGTTATGCTGGCCCAACATTGCTACCATTTGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000523022.6
ENST00000523953.5
ENST00000626824.1
CDS-3UTR CAA 90 bp TATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGAATCGGTTGGGTTGGGCGGTaGTTGTGCTGCTCTGAGCTG +
Preference number: 5 (lower is better)
Translates to: YVRSRAVFLRKDKFLLRIGWVGR*LCCSEL
Trigger: CAGCTCAGAGCAGCACAACAACCGCCCAACCCAACC...GATTCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521679.5
CDS-3UTR CAA 90 bp TTAATTGCTTGGAGGGCATCAAGTACTTTCTGCAGCTTTGGGTTGGCCTCACCATTCTGCAGCTTTGGGTaGGCCTCACCAACCTTCATC +
Preference number: 5 (lower is better)
Translates to: LIAWRASSTFCSFGLASPFCSFG*ASPTFI
Trigger: GATGAAGGTTGGTGAGGCCAACCCAAAGCTGCAGAA...TGGTGAGGCCAACCCAAAGCTGCAGAAAGTACTTGATGCCCTCCAAGCAATTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517429.5
CDS-3UTR CAA 90 bp TTATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGAATGGTTGGGTTGGGCGGTaGTTGTGCTGCATGGGGACA +
Preference number: 5 (lower is better)
Translates to: LCQKQGCVLEEGQVSSQNGWVGR*LCCMGT
Trigger: TGTCCCCATGCAGCACAACAACCGCCCAACCCAACC...ATTCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000431316.3
ENST00000522389.5
ENST00000523022.6
ENST00000523953.5
ENST00000542576.5
ENST00000626824.1
CDS-3UTR CAA 90 bp TATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGAATCCCTTCAGAGGTTGGGTaGGGCGGTTGTTGTGCTGCA +
Preference number: 5 (lower is better)
Translates to: YVRSRAVFLRKDKFLLRIPSEVG*GGCCAA
Trigger: TGCAGCACAACAACCGCCCAACCCAACCTCTGAAGG...GATTCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000431316.3
ENST00000522389.5
ENST00000523022.6
ENST00000523953.5
ENST00000542576.5
ENST00000626824.1
CDS-3UTR CAA 90 bp GATTATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGACCTTCAGAGGTTGGGTaGGGCGGTTGTTGTGCTGCA +
Preference number: 5 (lower is better)
Translates to: DYVRSRAVFLRKDKFLLRPSEVG*GGCCAA
Trigger: TGCAGCACAACAACCGCCCAACCCAACCTCTGAAGG...TCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATAATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000431316.3
ENST00000522389.5
ENST00000523022.6
ENST00000523953.5
ENST00000542576.5
ENST00000626824.1
CDS-3UTR CAA 90 bp GATTATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGATCTGCCCTTCAGAGGTaGGGTTGGGCGGTTGTTGTG +
Preference number: 5 (lower is better)
Translates to: DYVRSRAVFLRKDKFLLRSALQR*GWAVVV
Trigger: CACAACAACCGCCCAACCCAACCTCTGAAGGGCAGA...TCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATAATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000431316.3
ENST00000521679.5
ENST00000522389.5
ENST00000523022.6
ENST00000523953.5
ENST00000542576.5
ENST00000626824.1
CDS-3UTR CAA 90 bp TATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGAATCTCTGCCCTTCAGAGGTaGGGTTGGGCGGTTGTTGTG +
Preference number: 5 (lower is better)
Translates to: YVRSRAVFLRKDKFLLRISALQR*GWAVVV
Trigger: CACAACAACCGCCCAACCCAACCTCTGAAGGGCAGA...GATTCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000431316.3
ENST00000521679.5
ENST00000522389.5
ENST00000523022.6
ENST00000523953.5
ENST00000542576.5
ENST00000626824.1
CDS-3UTR CAA 90 bp TATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGAATCCCTTCAGAGGTTGGGTaGGGCGGTTGTTGTGCTGCT +
Preference number: 5 (lower is better)
Translates to: YVRSRAVFLRKDKFLLRIPSEVG*GGCCAA
Trigger: AGCAGCACAACAACCGCCCAACCCAACCTCTGAAGG...GATTCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521679.5
CDS GCA 90 bp GACAAGTTTCTTCTCAGAATCATCAAAATGAAGCTCTCACTGTTCTaGCCTTCAGAGGTTGGGTTGGGCGGTTGTTGTGCTGCATGGGGA +
Preference number: 5 (lower is better)
Translates to: DKFLLRIIKMKLSLF*PSEVGLGGCCAAWG
Trigger: TCCCCATGCAGCACAACAACCGCCCAACCCAACCTCTGAAGGGCAGAACAGTGAGAGCTTCATTTTGATGATTCTGAGAAGAAACTTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000431316.3
ENST00000522389.5
ENST00000523022.6
ENST00000523953.5
ENST00000542576.5
ENST00000626824.1
CDS GCA 90 bp GACAAGTTTCTTCTCAGAATCATCAAAATGAAGCTCTCACTGTTCTaGCCTTCAGAGGTTGGGTTGGGCGGTTGTTGTGCTGCTCTGAGC +
Preference number: 5 (lower is better)
Translates to: DKFLLRIIKMKLSLF*PSEVGLGGCCAALS
Trigger: GCTCAGAGCAGCACAACAACCGCCCAACCCAACCTCTGAAGGGCAGAACAGTGAGAGCTTCATTTTGATGATTCTGAGAAGAAACTTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521679.5
CDS-3UTR CAA 90 bp TATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGAATCCCAAACCATCAGCCTTaGAGGCAGCTTCAGCAAGGC +
Preference number: 5 (lower is better)
Translates to: YVRSRAVFLRKDKFLLRIPNHQP*RQLQQG
Trigger: GCCTTGCTGAAGCTGCCTCAAAGGCTGATGGTTTGG...GATTCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000431316.3
ENST00000521679.5
ENST00000522389.5
ENST00000523022.6
ENST00000523953.5
ENST00000542576.5
ENST00000626824.1
CDS-3UTR CAA 90 bp TTATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGAATTCTGCCCTTCAGAGGTaGGGTTGGGCGGTTGTTGTG +
Preference number: 5 (lower is better)
Translates to: LCQKQGCVLEEGQVSSQNSALQR*GWAVVV
Trigger: CACAACAACCGCCCAACCCAACCTCTGAAGGGCAGA...ATTCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000431316.3
ENST00000521679.5
ENST00000522389.5
ENST00000523022.6
ENST00000523953.5
ENST00000542576.5
ENST00000626824.1
CDS-3UTR CAA 90 bp TTATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGAATTGGGTTGGGCGGTTGTaGTGCTGCTCTGAGCTGACA +
Preference number: 5 (lower is better)
Translates to: LCQKQGCVLEEGQVSSQNWVGRL*CCSELT
Trigger: TGTCAGCTCAGAGCAGCACAACAACCGCCCAACCCA...ATTCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521679.5
CDS-3UTR CAA 90 bp GGAACTGAAAGAGCCTGTAGCTGTCAGAGAAAGGACCACCTTTCAGCACACCTGTGTTCAGGACCATTTTaGTCATCATATCCCCAGTCT +
Preference number: 5 (lower is better)
Translates to: GTERACSCQRKDHLSAHLCSGPF*SSYPQS
Trigger: AGACTGGGGATATGATGACAAAAATGGTCCTGAACA...CAGGTGTGCTGAAAGGTGGTCCTTTCTCTGACAGCTACAGGCTCTTTCAGTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517429.5
CDS-3UTR CAA 90 bp TTATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGAATCCAAACCATCAGCCTTaGAGGCAGCTTCAGCAAGGC +
Preference number: 5 (lower is better)
Translates to: LCQKQGCVLEEGQVSSQNPNHQP*RQLQQG
Trigger: GCCTTGCTGAAGCTGCCTCAAAGGCTGATGGTTTGG...ATTCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000431316.3
ENST00000521679.5
ENST00000522389.5
ENST00000523022.6
ENST00000523953.5
ENST00000542576.5
ENST00000626824.1
CDS-3UTR CAA 90 bp GATTATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGATTCTGCAGCTTTGGGTaGGCCTCACCAACCTTCATC +
Preference number: 5 (lower is better)
Translates to: DYVRSRAVFLRKDKFLLRFCSFG*ASPTFI
Trigger: GATGAAGGTTGGTGAGGCCAACCCAAAGCTGCAGAA...TCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATAATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431316.3
ENST00000521679.5
ENST00000523022.6
ENST00000523953.5
ENST00000542576.5
CDS-3UTR CAA 90 bp GATTATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGAGGGGCTCGTTTGCCCTaGGTTTTAATTGCTTGGAGG +
Preference number: 5 (lower is better)
Translates to: DYVRSRAVFLRKDKFLLRGARLP*VLIAWR
Trigger: CCTCCAAGCAATTAAAACCAAGGGCAAACGAGCCCC...TCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000431316.3
ENST00000521679.5
ENST00000523022.6
ENST00000523953.5
ENST00000542576.5
CDS-3UTR CAA 90 bp TATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGAATCGGGGCTCGTTTGCCCTaGGTTTTAATTGCTTGGAGG +
Preference number: 5 (lower is better)
Translates to: YVRSRAVFLRKDKFLLRIGARLP*VLIAWR
Trigger: CCTCCAAGCAATTAAAACCAAGGGCAAACGAGCCCC...GATTCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000431316.3
ENST00000521679.5
ENST00000523022.6
ENST00000523953.5
ENST00000542576.5
CDS TCA 90 bp TTTGCCCTTCATCAAAACACCAATAACTGCCAAACCATCAGCCTTTaGGGCAGCTTCAGCAAGGCTGGAGTACTTTGCAGAATTCCAGTG +
Preference number: 5 (lower is better)
Translates to: FALHQNTNNCQTISL*GSFSKAGVLCRIPV
Trigger: CACTGGAATTCTGCAAAGTACTCCAGCCTTGCTGAAGCTGCCTCAAAGGCTGATGGTTTGGCAGTTATTGGTGTTTTGATGAAGGGCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522389.5
ENST00000626824.1
CDS-3UTR CAA 90 bp GATTATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGAGCAATGGGATACAGCTaGCTCCATTGTTCAGGACCA +
Preference number: 5 (lower is better)
Translates to: DYVRSRAVFLRKDKFLLRAMGYS*LHCSGP
Trigger: TGGTCCTGAACAATGGAGCAAGCTGTATCCCATTGC...TCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATAATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000431316.3
ENST00000523022.6
ENST00000523953.5
ENST00000542576.5
CDS-3UTR CAA 90 bp AGTACTTTCTGCAGCTTTGGGTTGGCCTCACCAACCTTCATCAAAACACCAATAGCAATGGGATACAGCTaGCTCCATTGTTCAGGACCA +
Preference number: 5 (lower is better)
Translates to: STFCSFGLASPTFIKTPIAMGYS*LHCSGP
Trigger: TGGTCCTGAACAATGGAGCAAGCTGTATCCCATTGC...TATTGGTGTTTTGATGAAGGTTGGTGAGGCCAACCCAAAGCTGCAGAAAGTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517429.5
CDS-3UTR CAA 90 bp TTAATTGCTTGGAGGGCATCAAGTACTTTCTGCAGCTTTGGGTTGGCCTCACCACTGAACCATGCTCATTaGTACTGCCCCAGTGAAAAT +
Preference number: 5 (lower is better)
Translates to: LIAWRASSTFCSFGLASPLNHAH*YCPSEN
Trigger: ATTTTCACTGGGGCAGTACAAATGAGCATGGTTCAG...TGGTGAGGCCAACCCAAAGCTGCAGAAAGTACTTGATGCCCTCCAAGCAATTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517429.5
CDS-3UTR CAA 90 bp ACACAAATGGTAGCAATGTTGGGCCAGCATAACGATATTAAATCCAGTGGTCATCCAAACCATCAGCCTTaGAGGCAGCTTCAGCAAGGC +
Preference number: 5 (lower is better)
Translates to: TQMVAMLGQHNDIKSSGHPNHQP*RQLQQG
Trigger: GCCTTGCTGAAGCTGCCTCAAAGGCTGATGGTTTGG...ATGACCACTGGATTTAATATCGTTATGCTGGCCCAACATTGCTACCATTTGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000523022.6
ENST00000523953.5
ENST00000626824.1
CDS-3UTR CAA 90 bp TTATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGAATTTCTGCAGCTTTGGGTaGGCCTCACCAACCTTCATC +
Preference number: 5 (lower is better)
Translates to: LCQKQGCVLEEGQVSSQNFCSFG*ASPTFI
Trigger: GATGAAGGTTGGTGAGGCCAACCCAAAGCTGCAGAA...ATTCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431316.3
ENST00000521679.5
ENST00000523022.6
ENST00000523953.5
ENST00000542576.5
CDS-3UTR CAA 90 bp TTATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGAATGGGGCTCGTTTGCCCTaGGTTTTAATTGCTTGGAGG +
Preference number: 5 (lower is better)
Translates to: LCQKQGCVLEEGQVSSQNGARLP*VLIAWR
Trigger: CCTCCAAGCAATTAAAACCAAGGGCAAACGAGCCCC...ATTCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000431316.3
ENST00000521679.5
ENST00000523022.6
ENST00000523953.5
ENST00000542576.5
CDS-3UTR CAA 90 bp TATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGAATCGTGAATGGGGCTCGTTaGCCCTTCATCAAAACACCA +
Preference number: 5 (lower is better)
Translates to: YVRSRAVFLRKDKFLLRIVNGAR*PFIKTP
Trigger: TGGTGTTTTGATGAAGGGCAAACGAGCCCCATTCAC...GATTCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000522389.5
ENST00000626824.1
CDS-3UTR CAA 90 bp GATTATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGAAATGGCAGAGAAGCATaGTCCTTGCTAACGTGGGGA +
Preference number: 5 (lower is better)
Translates to: DYVRSRAVFLRKDKFLLRNGREA*SLLTWG
Trigger: TCCCCACGTTAGCAAGGACAATGCTTCTCTGCCATT...TCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000523022.6
ENST00000523953.5
ENST00000626824.1
CDS-3UTR CAA 90 bp TTATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGAATCAGGCTCCCATTTGTTaGGCGTTGGCCAGGAGAATA +
Preference number: 5 (lower is better)
Translates to: LCQKQGCVLEEGQVSSQNQAPIC*ALARRI
Trigger: TATTCTCCTGGCCAACGCCAAACAAATGGGAGCCTG...ATTCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000523953.5
ENST00000626824.1
CDS-3UTR CAA 90 bp GATTATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGAATCCCCAGTCTGGACTaGCCATTATCTTCTACTGAG +
Preference number: 5 (lower is better)
Translates to: DYVRSRAVFLRKDKFLLRIPSLD*PLSSTE
Trigger: CTCAGTAGAAGATAATGGCAAGTCCAGACTGGGGAT...TCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000431316.3
ENST00000522389.5
ENST00000523022.6
ENST00000523953.5
ENST00000542576.5
ENST00000626824.1
CDS-3UTR CAA 90 bp TTCATCAAAACACCAATAACTGCCAAACCATCAGCCTTTGAGGCAGCTTCAGCAATCCCCAGTCTGGACTaGCCATTATCTTCTACTGAG +
Preference number: 5 (lower is better)
Translates to: FIKTPITAKPSAFEAASAIPSLD*PLSSTE
Trigger: CTCAGTAGAAGATAATGGCAAGTCCAGACTGGGGAT...TGCTGAAGCTGCCTCAAAGGCTGATGGTTTGGCAGTTATTGGTGTTTTGATGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517429.5
CDS-3UTR CAA 90 bp TATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGAATCATCCCCAGTCTGGACTaGCCATTATCTTCTACTGAG +
Preference number: 5 (lower is better)
Translates to: YVRSRAVFLRKDKFLLRIIPSLD*PLSSTE
Trigger: CTCAGTAGAAGATAATGGCAAGTCCAGACTGGGGAT...GATTCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000431316.3
ENST00000522389.5
ENST00000523022.6
ENST00000523953.5
ENST00000542576.5
ENST00000626824.1
CDS-3UTR CAA 90 bp TTATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGAATGCAATGGGATACAGCTaGCTCCATTGTTCAGGACCA +
Preference number: 5 (lower is better)
Translates to: LCQKQGCVLEEGQVSSQNAMGYS*LHCSGP
Trigger: TGGTCCTGAACAATGGAGCAAGCTGTATCCCATTGC...ATTCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000431316.3
ENST00000523022.6
ENST00000523953.5
ENST00000542576.5
CDS-3UTR CAA 90 bp TATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGAATCCAAGGCTGGAGTACTTaGCAGAATTCCAGTGAGCTA +
Preference number: 5 (lower is better)
Translates to: YVRSRAVFLRKDKFLLRIQGWST*QNSSEL
Trigger: TAGCTCACTGGAATTCTGCAAAGTACTCCAGCCTTG...GATTCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000431316.3
ENST00000521679.5
ENST00000522389.5
ENST00000523022.6
ENST00000523953.5
ENST00000542576.5
ENST00000626824.1
CDS-3UTR CAA 90 bp GATTATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGACAAGGCTGGAGTACTTaGCAGAATTCCAGTGAGCTA +
Preference number: 5 (lower is better)
Translates to: DYVRSRAVFLRKDKFLLRQGWST*QNSSEL
Trigger: TAGCTCACTGGAATTCTGCAAAGTACTCCAGCCTTG...TCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATAATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000431316.3
ENST00000521679.5
ENST00000522389.5
ENST00000523022.6
ENST00000523953.5
ENST00000542576.5
ENST00000626824.1
CDS-3UTR CAA 90 bp TATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGAATCGTGAATGGGGCTCGTTaGCCCTTGGTTTTAATTGCT +
Preference number: 5 (lower is better)
Translates to: YVRSRAVFLRKDKFLLRIVNGAR*PLVLIA
Trigger: AGCAATTAAAACCAAGGGCAAACGAGCCCCATTCAC...GATTCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000431316.3
ENST00000521679.5
ENST00000523022.6
ENST00000523953.5
ENST00000542576.5
CDS-3UTR CAA 90 bp GATTATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGAGTGAATGGGGCTCGTTaGCCCTTGGTTTTAATTGCT +
Preference number: 5 (lower is better)
Translates to: DYVRSRAVFLRKDKFLLRVNGAR*PLVLIA
Trigger: AGCAATTAAAACCAAGGGCAAACGAGCCCCATTCAC...TCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000431316.3
ENST00000521679.5
ENST00000523022.6
ENST00000523953.5
ENST00000542576.5
CDS-3UTR CAA 90 bp GATTATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGAAGCAGGGCTGTGTTCTaGAGGAAGGACAAGTTTCTT +
Preference number: 5 (lower is better)
Translates to: DYVRSRAVFLRKDKFLLRSRAVF*RKDKFL
Trigger: AAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCT...TCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATAATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000431316.3
ENST00000521679.5
ENST00000522389.5
ENST00000523022.6
ENST00000523953.5
ENST00000542576.5
ENST00000626824.1
CDS-3UTR CAA 90 bp TATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGAATCAGCAGGGCTGTGTTCTaGAGGAAGGACAAGTTTCTT +
Preference number: 5 (lower is better)
Translates to: YVRSRAVFLRKDKFLLRISRAVF*RKDKFL
Trigger: AAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCT...GATTCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000431316.3
ENST00000521679.5
ENST00000522389.5
ENST00000523022.6
ENST00000523953.5
ENST00000542576.5
ENST00000626824.1
CDS-3UTR CAA 90 bp TTATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGAATGTGAATGGGGCTCGTTaGCCCTTCATCAAAACACCA +
Preference number: 5 (lower is better)
Translates to: LCQKQGCVLEEGQVSSQNVNGAR*PFIKTP
Trigger: TGGTGTTTTGATGAAGGGCAAACGAGCCCCATTCAC...ATTCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000522389.5
ENST00000626824.1
CDS-3UTR CAA 90 bp TATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGAATCAGAGAAGCATTGTCCTaGCTAACGTGGGGAGAAGAA +
Preference number: 5 (lower is better)
Translates to: YVRSRAVFLRKDKFLLRIREALS*LTWGEE
Trigger: TTCTTCTCCCCACGTTAGCAAGGACAATGCTTCTCT...GATTCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000523022.6
ENST00000523953.5
ENST00000626824.1
CDS-3UTR CAA 90 bp ACACAAATGGTAGCAATGTTGGGCCAGCATAACGATATTAAATCCAGTGGTCATCAGGCTCCCATTTGTTaGGCGTTGGCCAGGAGAATA +
Preference number: 5 (lower is better)
Translates to: TQMVAMLGQHNDIKSSGHQAPIC*ALARRI
Trigger: TATTCTCCTGGCCAACGCCAAACAAATGGGAGCCTG...ATGACCACTGGATTTAATATCGTTATGCTGGCCCAACATTGCTACCATTTGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000523953.5
ENST00000626824.1
CDS-3UTR CAA 90 bp TTATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGAATATCCCCAGTCTGGACTaGCCATTATCTTCTACTGAG +
Preference number: 5 (lower is better)
Translates to: LCQKQGCVLEEGQVSSQNIPSLD*PLSSTE
Trigger: CTCAGTAGAAGATAATGGCAAGTCCAGACTGGGGAT...ATTCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000431316.3
ENST00000522389.5
ENST00000523022.6
ENST00000523953.5
ENST00000542576.5
ENST00000626824.1
CDS-3UTR CAA 90 bp GCCTCACCAACCTTCATCAAAACACCAATAACTGCCAAACCATCAGCCTTTGAGATACAGCTTGCTCCATaGTTCAGGACCATTTTTGTC +
Preference number: 5 (lower is better)
Translates to: ASPTFIKTPITAKPSAFEIQLAP*FRTIFV
Trigger: GACAAAAATGGTCCTGAACAATGGAGCAAGCTGTAT...CTCAAAGGCTGATGGTTTGGCAGTTATTGGTGTTTTGATGAAGGTTGGTGAGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000517429.5
CDS-3UTR CAA 90 bp ACACAAATGGTAGCAATGTTGGGCCAGCATAACGATATTAAATCCAGTGGTCATGCAATGGGATACAGCTaGCTCCATTGTTCAGGACCA +
Preference number: 5 (lower is better)
Translates to: TQMVAMLGQHNDIKSSGHAMGYS*LHCSGP
Trigger: TGGTCCTGAACAATGGAGCAAGCTGTATCCCATTGC...ATGACCACTGGATTTAATATCGTTATGCTGGCCCAACATTGCTACCATTTGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000523022.6
ENST00000523953.5
CDS-3UTR CAA 90 bp GTTGGCCTCACCAACCTTCATCAAAACACCAATAACTGCCAAACCATCAGCCTTAAGGAATGCCCCACATaGATAATTTCTTTGGCTGTG +
Preference number: 5 (lower is better)
Translates to: VGLTNLHQNTNNCQTISLKECPT*IISLAV
Trigger: CACAGCCAAAGAAATTATCAATGTGGGGCATTCCTT...AAGGCTGATGGTTTGGCAGTTATTGGTGTTTTGATGAAGGTTGGTGAGGCCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517429.5
CDS-3UTR CAA 90 bp TATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGAATCCTGAACCATGCTCATTaGTACTGCCCCAGTGAAAAT +
Preference number: 5 (lower is better)
Translates to: YVRSRAVFLRKDKFLLRILNHAH*YCPSEN
Trigger: ATTTTCACTGGGGCAGTACAAATGAGCATGGTTCAG...GATTCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000431316.3
ENST00000521679.5
ENST00000523022.6
ENST00000523953.5
ENST00000542576.5
CDS-3UTR CAA 90 bp GATTATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGACTGAACCATGCTCATTaGTACTGCCCCAGTGAAAAT +
Preference number: 5 (lower is better)
Translates to: DYVRSRAVFLRKDKFLLRLNHAH*YCPSEN
Trigger: ATTTTCACTGGGGCAGTACAAATGAGCATGGTTCAG...TCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000431316.3
ENST00000521679.5
ENST00000523022.6
ENST00000523953.5
ENST00000542576.5
CDS-3UTR CAA 90 bp TATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGAATCAGCTCGGCAGAATATTaGACTCCATCCACTGTATGT +
Preference number: 5 (lower is better)
Translates to: YVRSRAVFLRKDKFLLRISSAEY*TPSTVC
Trigger: ACATACAGTGGATGGAGTCAAATATTCTGCCGAGCT...GATTCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431316.3
ENST00000521679.5
ENST00000523022.6
ENST00000523953.5
ENST00000542576.5
CDS-3UTR CAA 90 bp AGTGAAAATGGAACTGAAAGAGCCTGTAGCTGTCAGAGAAAGGACCACCTTTCAAGCTCGGCAGAATATTaGACTCCATCCACTGTATGT +
Preference number: 5 (lower is better)
Translates to: SENGTERACSCQRKDHLSSSAEY*TPSTVC
Trigger: ACATACAGTGGATGGAGTCAAATATTCTGCCGAGCT...TGAAAGGTGGTCCTTTCTCTGACAGCTACAGGCTCTTTCAGTTCCATTTTCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517429.5
CDS-3UTR CAA 90 bp GATTATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGAAGCTCGGCAGAATATTaGACTCCATCCACTGTATGT +
Preference number: 5 (lower is better)
Translates to: DYVRSRAVFLRKDKFLLRSSAEY*TPSTVC
Trigger: ACATACAGTGGATGGAGTCAAATATTCTGCCGAGCT...TCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431316.3
ENST00000521679.5
ENST00000523022.6
ENST00000523953.5
ENST00000542576.5
CDS-3UTR CAA 90 bp TTATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGAATCAAGGCTGGAGTACTTaGCAGAATTCCAGTGAGCTA +
Preference number: 5 (lower is better)
Translates to: LCQKQGCVLEEGQVSSQNQGWST*QNSSEL
Trigger: TAGCTCACTGGAATTCTGCAAAGTACTCCAGCCTTG...ATTCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000431316.3
ENST00000521679.5
ENST00000522389.5
ENST00000523022.6
ENST00000523953.5
ENST00000542576.5
ENST00000626824.1
CDS-3UTR CAA 90 bp TTATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGAATGTGAATGGGGCTCGTTaGCCCTTGGTTTTAATTGCT +
Preference number: 5 (lower is better)
Translates to: LCQKQGCVLEEGQVSSQNVNGAR*PLVLIA
Trigger: AGCAATTAAAACCAAGGGCAAACGAGCCCCATTCAC...ATTCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000431316.3
ENST00000521679.5
ENST00000523022.6
ENST00000523953.5
ENST00000542576.5
CDS-3UTR CAA 90 bp TTATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGAATAGCAGGGCTGTGTTCTaGAGGAAGGACAAGTTTCTT +
Preference number: 5 (lower is better)
Translates to: LCQKQGCVLEEGQVSSQNSRAVF*RKDKFL
Trigger: AAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCT...ATTCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000431316.3
ENST00000521679.5
ENST00000522389.5
ENST00000523022.6
ENST00000523953.5
ENST00000542576.5
ENST00000626824.1
CDS-3UTR CAA 90 bp ACACAAATGGTAGCAATGTTGGGCCAGCATAACGATATTAAATCCAGTGGTCATAATGGCAGAGAAGCATaGTCCTTGCTAACGTGGGGA +
Preference number: 5 (lower is better)
Translates to: TQMVAMLGQHNDIKSSGHNGREA*SLLTWG
Trigger: TCCCCACGTTAGCAAGGACAATGCTTCTCTGCCATT...ATGACCACTGGATTTAATATCGTTATGCTGGCCCAACATTGCTACCATTTGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000523022.6
ENST00000523953.5
ENST00000626824.1
CDS CCA 90 bp TACATGGAAGGAATGCCCCACATTGATAATTTCTTTGGCTGTGGCTaGGTTGTAGGAGACACTAATAGGTTTCAGAGAGGTGTCATGTTT +
Preference number: 5 (lower is better)
Translates to: YMEGMPHIDNFFGCG*VVGDTNRFQRGVMF
Trigger: AAACATGACACCTCTCTGAAACCTATTAGTGTCTCCTACAACCCAGCCACAGCCAAAGAAATTATCAATGTGGGGCATTCCTTCCATGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000431316.3
ENST00000517429.5
ENST00000517590.5
ENST00000517618.5
ENST00000518341.5
ENST00000520093.5
ENST00000520990.5
ENST00000521846.5
ENST00000522579.5
ENST00000522662.5
ENST00000522814.5
ENST00000523022.6
ENST00000523858.5
ENST00000523953.5
ENST00000542576.5
CDS-3UTR CAA 90 bp ACACAAATGGTAGCAATGTTGGGCCAGCATAACGATATTAAATCCAGTGGTCATATCCCCAGTCTGGACTaGCCATTATCTTCTACTGAG +
Preference number: 5 (lower is better)
Translates to: TQMVAMLGQHNDIKSSGHIPSLD*PLSSTE
Trigger: CTCAGTAGAAGATAATGGCAAGTCCAGACTGGGGAT...ATGACCACTGGATTTAATATCGTTATGCTGGCCCAACATTGCTACCATTTGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000523022.6
ENST00000523953.5
ENST00000626824.1
CDS-3UTR CAA 90 bp GATTATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGATGTTCAGGACCATTTTaGTCATCATATCCCCAGTCT +
Preference number: 5 (lower is better)
Translates to: DYVRSRAVFLRKDKFLLRCSGPF*SSYPQS
Trigger: AGACTGGGGATATGATGACAAAAATGGTCCTGAACA...TCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000431316.3
ENST00000523022.6
ENST00000523953.5
ENST00000542576.5
CDS-3UTR CAA 90 bp GATTATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGAATACAGCTTGCTCCATaGTTCAGGACCATTTTTGTC +
Preference number: 5 (lower is better)
Translates to: DYVRSRAVFLRKDKFLLRIQLAP*FRTIFV
Trigger: GACAAAAATGGTCCTGAACAATGGAGCAAGCTGTAT...TCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATAATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000431316.3
ENST00000523022.6
ENST00000523953.5
ENST00000542576.5
CDS-3UTR CAA 90 bp TATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGAATCATACAGCTTGCTCCATaGTTCAGGACCATTTTTGTC +
Preference number: 5 (lower is better)
Translates to: YVRSRAVFLRKDKFLLRIIQLAP*FRTIFV
Trigger: GACAAAAATGGTCCTGAACAATGGAGCAAGCTGTAT...GATTCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000431316.3
ENST00000523022.6
ENST00000523953.5
ENST00000542576.5
CDS-3UTR CAA 90 bp TATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGAATCAAGGAATGCCCCACATaGATAATTTCTTTGGCTGTG +
Preference number: 5 (lower is better)
Translates to: YVRSRAVFLRKDKFLLRIKECPT*IISLAV
Trigger: CACAGCCAAAGAAATTATCAATGTGGGGCATTCCTT...GATTCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000431316.3
ENST00000523022.6
ENST00000523953.5
ENST00000542576.5
CDS-3UTR CAA 90 bp GATTATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGAAAGGAATGCCCCACATaGATAATTTCTTTGGCTGTG +
Preference number: 5 (lower is better)
Translates to: DYVRSRAVFLRKDKFLLRKECPT*IISLAV
Trigger: CACAGCCAAAGAAATTATCAATGTGGGGCATTCCTT...TCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000431316.3
ENST00000523022.6
ENST00000523953.5
ENST00000542576.5
CDS-3UTR CAA 90 bp TTATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGAATCTGAACCATGCTCATTaGTACTGCCCCAGTGAAAAT +
Preference number: 5 (lower is better)
Translates to: LCQKQGCVLEEGQVSSQNLNHAH*YCPSEN
Trigger: ATTTTCACTGGGGCAGTACAAATGAGCATGGTTCAG...ATTCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000431316.3
ENST00000521679.5
ENST00000523022.6
ENST00000523953.5
ENST00000542576.5
CDS-3UTR CAA 90 bp TTATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGAATAGCTCGGCAGAATATTaGACTCCATCCACTGTATGT +
Preference number: 5 (lower is better)
Translates to: LCQKQGCVLEEGQVSSQNSSAEY*TPSTVC
Trigger: ACATACAGTGGATGGAGTCAAATATTCTGCCGAGCT...ATTCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431316.3
ENST00000521679.5
ENST00000523022.6
ENST00000523953.5
ENST00000542576.5
CDS-3UTR CAA 90 bp TATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGAATCCTACGTGAAGCATTTTaGTCATCATATCCCCAGTCT +
Preference number: 5 (lower is better)
Translates to: YVRSRAVFLRKDKFLLRILREAF*SSYPQS
Trigger: AGACTGGGGATATGATGACAAAAATGCTTCACGTAG...GATTCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000522389.5
ENST00000626824.1
CDS-3UTR CAA 90 bp TATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGAATCCAAATGGTAGCAATGTaGGGCCAGCATAACGATATT +
Preference number: 5 (lower is better)
Translates to: YVRSRAVFLRKDKFLLRIQMVAM*GQHNDI
Trigger: AATATCGTTATGCTGGCCCAACATTGCTACCATTTG...GATTCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000523022.6
ENST00000523953.5
ENST00000626824.1
CDS-3UTR CAA 90 bp GATTATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGACAAATGGTAGCAATGTaGGGCCAGCATAACGATATT +
Preference number: 5 (lower is better)
Translates to: DYVRSRAVFLRKDKFLLRQMVAM*GQHNDI
Trigger: AATATCGTTATGCTGGCCCAACATTGCTACCATTTG...TCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATAATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000523022.6
ENST00000523953.5
ENST00000626824.1
CDS-3UTR CAA 90 bp ACACAAATGGTAGCAATGTTGGGCCAGCATAACGATATTAAATCCAGTGGTCATAGAGAAGCATTGTCCTaGCTAACGTGGGGAGAAGAA +
Preference number: 5 (lower is better)
Translates to: TQMVAMLGQHNDIKSSGHREALS*LTWGEE
Trigger: TTCTTCTCCCCACGTTAGCAAGGACAATGCTTCTCT...ATGACCACTGGATTTAATATCGTTATGCTGGCCCAACATTGCTACCATTTGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000523022.6
ENST00000523953.5
ENST00000626824.1
CDS-3UTR CAA 90 bp GATTATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGATTTGAACTCAATTATTaGGGGTGTTTGAGTGGCCTG +
Preference number: 5 (lower is better)
Translates to: DYVRSRAVFLRKDKFLLRFELNY*GCLSGL
Trigger: CAGGCCACTCAAACACCCCAAATAATTGAGTTCAAA...TCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000523953.5
ENST00000626824.1
CDS-3UTR CAA 90 bp TATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGAATCTTTGAACTCAATTATTaGGGGTGTTTGAGTGGCCTG +
Preference number: 5 (lower is better)
Translates to: YVRSRAVFLRKDKFLLRIFELNY*GCLSGL
Trigger: CAGGCCACTCAAACACCCCAAATAATTGAGTTCAAA...GATTCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000523953.5
ENST00000626824.1
CDS-3UTR CAA 90 bp TTATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGAATATAATTTGCATAATTTaGGCGGGCTTTGGGGCATGG +
Preference number: 5 (lower is better)
Translates to: LCQKQGCVLEEGQVSSQNIICII*AGFGAW
Trigger: CCATGCCCCAAAGCCCGCCAAAATTATGCAAATTAT...ATTCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000523953.5
ENST00000626824.1
CDS-3UTR CAA 90 bp TTATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGAATTGTTCAGGACCATTTTaGTCATCATATCCCCAGTCT +
Preference number: 5 (lower is better)
Translates to: LCQKQGCVLEEGQVSSQNCSGPF*SSYPQS
Trigger: AGACTGGGGATATGATGACAAAAATGGTCCTGAACA...ATTCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000431316.3
ENST00000523022.6
ENST00000523953.5
ENST00000542576.5
CDS-3UTR CAA 90 bp TTATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGAATATACAGCTTGCTCCATaGTTCAGGACCATTTTTGTC +
Preference number: 5 (lower is better)
Translates to: LCQKQGCVLEEGQVSSQNIQLAP*FRTIFV
Trigger: GACAAAAATGGTCCTGAACAATGGAGCAAGCTGTAT...ATTCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000431316.3
ENST00000523022.6
ENST00000523953.5
ENST00000542576.5
CDS-3UTR CAA 90 bp TTATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGAATAAGGAATGCCCCACATaGATAATTTCTTTGGCTGTG +
Preference number: 5 (lower is better)
Translates to: LCQKQGCVLEEGQVSSQNKECPT*IISLAV
Trigger: CACAGCCAAAGAAATTATCAATGTGGGGCATTCCTT...ATTCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000431316.3
ENST00000523022.6
ENST00000523953.5
ENST00000542576.5
CDS-3UTR CAA 90 bp TATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGAATCTATCACCTTCAACATTaGATAGAAGGCTGCGGAATT +
Preference number: 5 (lower is better)
Translates to: YVRSRAVFLRKDKFLLRIYHLQH*IEGCGI
Trigger: AATTCCGCAGCCTTCTATCAAATGTTGAAGGTGATA...GATTCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000431316.3
ENST00000522389.5
ENST00000523022.6
ENST00000523953.5
ENST00000542576.5
ENST00000626824.1
CDS-3UTR CAA 90 bp TTATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGAATCTACGTGAAGCATTTTaGTCATCATATCCCCAGTCT +
Preference number: 5 (lower is better)
Translates to: LCQKQGCVLEEGQVSSQNLREAF*SSYPQS
Trigger: AGACTGGGGATATGATGACAAAAATGCTTCACGTAG...ATTCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000522389.5
ENST00000626824.1
CDS-3UTR CAA 90 bp GATTATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGACCAGCTGCTCTTAGGTaGTTGTATTTGAAGCAAAAT +
Preference number: 5 (lower is better)
Translates to: DYVRSRAVFLRKDKFLLRPAALR*LYLKQN
Trigger: ATTTTGCTTCAAATACAACAACCTAAGAGCAGCTGG...TCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000523022.6
ENST00000523953.5
ENST00000626824.1
CDS-3UTR CAA 90 bp TATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGAATCCCAGCTGCTCTTAGGTaGTTGTATTTGAAGCAAAAT +
Preference number: 5 (lower is better)
Translates to: YVRSRAVFLRKDKFLLRIPAALR*LYLKQN
Trigger: ATTTTGCTTCAAATACAACAACCTAAGAGCAGCTGG...GATTCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000523022.6
ENST00000523953.5
ENST00000626824.1
CDS-3UTR CAA 90 bp GATTATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGAGCCTTTAGTCATATTTaGACTGGATTTCAGAGTGTG +
Preference number: 5 (lower is better)
Translates to: DYVRSRAVFLRKDKFLLRAFSHI*TGFQSV
Trigger: CACACTCTGAAATCCAGTCAAAATATGACTAAAGGC...TCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATAATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000523953.5
ENST00000626824.1
CDS-3UTR CAA 90 bp ACACAAATGGTAGCAATGTTGGGCCAGCATAACGATATTAAATCCAGTGGTCATATAATTTGCATAATTTaGGCGGGCTTTGGGGCATGG +
Preference number: 5 (lower is better)
Translates to: TQMVAMLGQHNDIKSSGHIICII*AGFGAW
Trigger: CCATGCCCCAAAGCCCGCCAAAATTATGCAAATTAT...ATGACCACTGGATTTAATATCGTTATGCTGGCCCAACATTGCTACCATTTGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000523953.5
ENST00000626824.1
CDS-3UTR CAA 90 bp TTATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGAATTATCACCTTCAACATTaGATAGAAGGCTGCGGAATT +
Preference number: 5 (lower is better)
Translates to: LCQKQGCVLEEGQVSSQNYHLQH*IEGCGI
Trigger: AATTCCGCAGCCTTCTATCAAATGTTGAAGGTGATA...ATTCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000431316.3
ENST00000522389.5
ENST00000523022.6
ENST00000523953.5
ENST00000542576.5
ENST00000626824.1
CDS-3UTR CAA 90 bp GATTATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGAGCTGCTCTTAGGTTGTaGTATTTGAAGCAAAATACT +
Preference number: 5 (lower is better)
Translates to: DYVRSRAVFLRKDKFLLRAALRL*YLKQNT
Trigger: AGTATTTTGCTTCAAATACAACAACCTAAGAGCAGC...TCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000523022.6
ENST00000523953.5
ENST00000626824.1
CDS-3UTR CAA 90 bp TATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGAATCGCTGCTCTTAGGTTGTaGTATTTGAAGCAAAATACT +
Preference number: 5 (lower is better)
Translates to: YVRSRAVFLRKDKFLLRIAALRL*YLKQNT
Trigger: AGTATTTTGCTTCAAATACAACAACCTAAGAGCAGC...GATTCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000523022.6
ENST00000523953.5
ENST00000626824.1
CDS-3UTR CAA 90 bp TTATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGAATCCAGCTGCTCTTAGGTaGTTGTATTTGAAGCAAAAT +
Preference number: 5 (lower is better)
Translates to: LCQKQGCVLEEGQVSSQNPAALR*LYLKQN
Trigger: ATTTTGCTTCAAATACAACAACCTAAGAGCAGCTGG...ATTCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000523022.6
ENST00000523953.5
ENST00000626824.1
CDS-3UTR CAA 90 bp ACACAAATGGTAGCAATGTTGGGCCAGCATAACGATATTAAATCCAGTGGTCATCAAATGGTAGCAATGTaGGGCCAGCATAACGATATT +
Preference number: 5 (lower is better)
Translates to: TQMVAMLGQHNDIKSSGHQMVAM*GQHNDI
Trigger: AATATCGTTATGCTGGCCCAACATTGCTACCATTTG...ATGACCACTGGATTTAATATCGTTATGCTGGCCCAACATTGCTACCATTTGTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000523022.6
ENST00000523953.5
ENST00000626824.1
CDS-3UTR CAA 90 bp TTATGTCAGAAGCAGGGCTGTGTTCTTGAGGAAGGACAAGTTTCTTCTCAGAATGCCTTTAGTCATATTTaGACTGGATTTCAGAGTGTG +
Preference number: 5 (lower is better)
Translates to: LCQKQGCVLEEGQVSSQNAFSHI*TGFQSV
Trigger: CACACTCTGAAATCCAGTCAAAATATGACTAAAGGC...ATTCTGAGAAGAAACTTGTCCTTCCTCAAGAACACAGCCCTGCTTCTGACATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000523953.5
ENST00000626824.1
CDS TCA 72 bp AAGGCTGCCACAGAGGACCACGCAGGGGGTTGCACCTaGGGACTGGGTACCACAGGCTGGAGGGGGAATGGG +
Preference number: 6 (lower is better)
Translates to: KAATEDHAGGCT*GLGTTGWRGNG
Trigger: CCCATTCCCCCTCCAGCCTGTGGTACCCAGTCCTCAGGTGCAACCCCCTGCGTGGTCCTCTGTGGCAGCCTT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000523953.5
ENST00000626824.1
CDS CCA 72 bp CAAAATGAAGCTCTCACTGTTCTGCCCTTCAGAGGTTaGGTTGGGCGGTTGTTGTGCTGCATGGGGACAGCG +
Preference number: 6 (lower is better)
Translates to: QNEALTVLPFRG*VGRLLCCMGTA
Trigger: CGCTGTCCCCATGCAGCACAACAACCGCCCAACCCAACCTCTGAAGGGCAGAACAGTGAGAGCTTCATTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000431316.3
ENST00000522389.5
ENST00000523022.6
ENST00000523953.5
ENST00000542576.5
ENST00000626824.1
CDS CAA 72 bp CTCACTGTTCTGCCCTTCAGAGGTTGGGTTGGGCGGTaGTTGTGCTGCATGGGGACAGCGTTATCACCTTCA +
Preference number: 6 (lower is better)
Translates to: LTVLPFRGWVGR*LCCMGTALSPS
Trigger: TGAAGGTGATAACGCTGTCCCCATGCAGCACAACAACCGCCCAACCCAACCTCTGAAGGGCAGAACAGTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000431316.3
ENST00000522389.5
ENST00000523022.6
ENST00000523953.5
ENST00000524324.5
ENST00000542576.5
ENST00000626824.1
CDS CAA 72 bp ACTGTTCTGCCCTTCAGAGGTTGGGTTGGGCGGTTGTaGTGCTGCATGGGGACAGCGTTATCACCTTCAACA +
Preference number: 6 (lower is better)
Translates to: TVLPFRGWVGRL*CCMGTALSPST
Trigger: TGTTGAAGGTGATAACGCTGTCCCCATGCAGCACAACAACCGCCCAACCCAACCTCTGAAGGGCAGAACAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000431316.3
ENST00000522389.5
ENST00000523022.6
ENST00000523953.5
ENST00000524324.5
ENST00000542576.5
ENST00000626824.1
CDS CAA 72 bp ATGAAGCTCTCACTGTTCTGCCCTTCAGAGGTTGGGTaGGGCGGTTGTTGTGCTGCATGGGGACAGCGTTAT +
Preference number: 6 (lower is better)
Translates to: MKLSLFCPSEVG*GGCCAAWGQRY
Trigger: ATAACGCTGTCCCCATGCAGCACAACAACCGCCCAACCCAACCTCTGAAGGGCAGAACAGTGAGAGCTTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000431316.3
ENST00000522389.5
ENST00000523022.6
ENST00000523953.5
ENST00000524324.5
ENST00000542576.5
ENST00000626824.1
CDS CAA 72 bp AGGCTGACTCGTAACCAGGCTCCCATTTGTTTGGCGTaGGCCAGGAGAATACATCAGTCATGGCAAGGGCCT +
Preference number: 6 (lower is better)
Translates to: RLTRNQAPICLA*ARRIHQSWQGP
Trigger: AGGCCCTTGCCATGACTGATGTATTCTCCTGGCCAACGCCAAACAAATGGGAGCCTGGTTACGAGTCAGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000523953.5
ENST00000626824.1
CDS CCA 72 bp CAAAATGAAGCTCTCACTGTTCTGCCCTTCAGAGGTTaGGTTGGGCGGTTGTTGTGCTGCTCTGAGCTGACA +
Preference number: 6 (lower is better)
Translates to: QNEALTVLPFRG*VGRLLCCSELT
Trigger: TGTCAGCTCAGAGCAGCACAACAACCGCCCAACCCAACCTCTGAAGGGCAGAACAGTGAGAGCTTCATTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521679.5
CDS CAA 90 bp GAAGCTCTCACTGTTCTGCCCTTCAGAGGTTGGGTTGGGCGGTTGTaGTGCTGCATGGGGACAGCGTTATCACCTTCAACATTTGATAGA +
Preference number: 6 (lower is better)
Translates to: EALTVLPFRGWVGRL*CCMGTALSPSTFDR
Trigger: TCTATCAAATGTTGAAGGTGATAACGCTGTCCCCATGCAGCACAACAACCGCCCAACCCAACCTCTGAAGGGCAGAACAGTGAGAGCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000431316.3
ENST00000522389.5
ENST00000523022.6
ENST00000523953.5
ENST00000524324.5
ENST00000542576.5
ENST00000626824.1
CDS TCA 72 bp TCCAGTTCTTTTCACTACCTCTGTGGAAAACAGCTCTaGATGAGAGAAGGCTGCCACAGAGGACCACGCAGG +
Preference number: 6 (lower is better)
Translates to: SSSFHYLCGKQL*MREGCHRGPRR
Trigger: CCTGCGTGGTCCTCTGTGGCAGCCTTCTCTCATTCAGAGCTGTTTTCCACAGAGGTAGTGAAAAGAACTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000519129.5
ENST00000521846.5
ENST00000523858.5
ENST00000523953.5
ENST00000626824.1
CDS TCA 72 bp GGGTGTGGATTTAATCAGCTGCTCAAGAGAGGAAACTaGCCAGCCTCTAGCCAAGGCCTCCATACTAGGTCA +
Preference number: 6 (lower is better)
Translates to: GCGFNQLLKRGN*PASSQGLHTRS
Trigger: TGACCTAGTATGGAGGCCTTGGCTAGAGGCTGGTCAGTTTCCTCTCTTGAGCAGCTGATTAAATCCACACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000523953.5
ENST00000626824.1
CDS CAA 72 bp TGTGCTGCATGGGGACAGCGTTATCACCTTCAACATTaGATAGAAGGCTGCGGAATTGTGCCAGCTGCTCTG +
Preference number: 6 (lower is better)
Translates to: CAAWGQRYHLQH*IEGCGIVPAAL
Trigger: CAGAGCAGCTGGCACAATTCCGCAGCCTTCTATCAAATGTTGAAGGTGATAACGCTGTCCCCATGCAGCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000431316.3
ENST00000517618.5
ENST00000519991.5
ENST00000522389.5
ENST00000523022.6
ENST00000523953.5
ENST00000524324.5
ENST00000542576.5
ENST00000626824.1
CDS CAA 90 bp AATGAAGCTCTCACTGTTCTGCCCTTCAGAGGTTGGGTTGGGCGGTaGTTGTGCTGCATGGGGACAGCGTTATCACCTTCAACATTTGAT +
Preference number: 6 (lower is better)
Translates to: NEALTVLPFRGWVGR*LCCMGTALSPSTFD
Trigger: ATCAAATGTTGAAGGTGATAACGCTGTCCCCATGCAGCACAACAACCGCCCAACCCAACCTCTGAAGGGCAGAACAGTGAGAGCTTCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000431316.3
ENST00000522389.5
ENST00000523022.6
ENST00000523953.5
ENST00000542576.5
ENST00000626824.1
CDS GCA 72 bp TCATTCCTCCTTTCACATGGTAAGGATTGTCTGAGCTaGTGCAACCCAGCTCTGAATGAGAGAAGGCTGCCA +
Preference number: 6 (lower is better)
Translates to: SFLLSHGKDCLS*CNPALNERRLP
Trigger: TGGCAGCCTTCTCTCATTCAGAGCTGGGTTGCAGCAGCTCAGACAATCCTTACCATGTGAAAGGAGGAATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000517590.5
ENST00000520663.5
ENST00000520990.5
CDS GCA 72 bp GATAAGGGAAGTGGTTGGGGTGTGGATTTAATCAGCTaGTCAAGAGAGGAAACTGACCAGCCTCTAGCCAAG +
Preference number: 6 (lower is better)
Translates to: DKGSGWGVDLIS*SREETDQPLAK
Trigger: CTTGGCTAGAGGCTGGTCAGTTTCCTCTCTTGAGCAGCTGATTAAATCCACACCCCAACCACTTCCCTTATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000523953.5
ENST00000626824.1
CDS CCA 72 bp CCTTCAGAGGTTGGGTTGGGCGGTTGTTGTGCTGCATaGGGACAGCGTTATCACCTTCAACATTTGATAGAA +
Preference number: 6 (lower is better)
Translates to: PSEVGLGGCCAA*GQRYHLQHLIE
Trigger: TTCTATCAAATGTTGAAGGTGATAACGCTGTCCCCATGCAGCACAACAACCGCCCAACCCAACCTCTGAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000431316.3
ENST00000522389.5
ENST00000523022.6
ENST00000523953.5
ENST00000524324.5
ENST00000542576.5
ENST00000626824.1
CDS CCA 72 bp CCTGTAGCTGTCAGAGAAAGGACCACCTTTCAGCACTaGAAGAAAAGGGAACCGATTGTTAGCCTGATGCTC +
Preference number: 6 (lower is better)
Translates to: PVAVRERTTFQH*KKREPIVSLML
Trigger: GAGCATCAGGCTAACAATCGGTTCCCTTTTCTTCCAGTGCTGAAAGGTGGTCCTTTCTCTGACAGCTACAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523712.5
CDS CAA 72 bp GGGGACTGGTTATTTCCATTGGCAATGGGATACAGCTaGCTCCATTGTTCAGGACCTGTAGTCCCAGCTACT +
Preference number: 6 (lower is better)
Translates to: GDWLFPLAMGYS*LHCSGPVVPAT
Trigger: AGTAGCTGGGACTACAGGTCCTGAACAATGGAGCAAGCTGTATCCCATTGCCAATGGAAATAACCAGTCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518341.5
CDS GCA 72 bp CTTCTCAGAATCATCAAAATGAAGCTCTCACTGTTCTaGCCTTCAGAGGTTGGGTTGGGCGGTTGTTGTGCT +
Preference number: 6 (lower is better)
Translates to: LLRIIKMKLSLF*PSEVGLGGCCA
Trigger: AGCACAACAACCGCCCAACCCAACCTCTGAAGGGCAGAACAGTGAGAGCTTCATTTTGATGATTCTGAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000431316.3
ENST00000521679.5
ENST00000522389.5
ENST00000523022.6
ENST00000523953.5
ENST00000542576.5
ENST00000626824.1
CDS GCA 72 bp GTCTTTACCACCTGGGCGTTTTCCAGAAGTCCAAGATaGCTCACTAGATTACAGCAATGCTGCACACAAGCA +
Preference number: 6 (lower is better)
Translates to: VFTTWAFSRSPR*LTRLQQCCTQA
Trigger: TGCTTGTGTGCAGCATTGCTGTAATCTAGTGAGGCATCTTGGACTTCTGGAAAACGCCCAGGTGGTAAAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520093.5
CDS CCA 72 bp AGAGAGCTGGGAGTTCCAAAAATTGTCTTTACCACCTaGGCGTTTTCCAGAAGTCCAAGATGCCTCACTAGA +
Preference number: 6 (lower is better)
Translates to: RELGVPKIVFTT*AFSRSPRCLTR
Trigger: TCTAGTGAGGCATCTTGGACTTCTGGAAAACGCCCAGGTGGTAAAGACAATTTTTGGAACTCCCAGCTCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000520093.5
ENST00000520990.5
CDS CAA 72 bp TGTGAATGGGGCTCGTTTGCCCTTGGTTTTAATTGCTaGGAGGGCATCAAGTACTTTCTGCAGCTTTGGGTT +
Preference number: 6 (lower is better)
Translates to: CEWGSFALGFNC*EGIKYFLQLWV
Trigger: AACCCAAAGCTGCAGAAAGTACTTGATGCCCTCCAAGCAATTAAAACCAAGGGCAAACGAGCCCCATTCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000431316.3
ENST00000517618.5
ENST00000519991.5
ENST00000520663.5
ENST00000521679.5
ENST00000523022.6
ENST00000523712.5
ENST00000523953.5
ENST00000524324.5
ENST00000542576.5
CDS TCA 72 bp ACAAGGAAGAAACCAAGTAGAAATGTGACAAGTCCCTaGAGGCTGACTCGTAACCAGGCTCCCATTTGTTTG +
Preference number: 6 (lower is better)
Translates to: TRKKPSRNVTSP*RLTRNQAPICL
Trigger: CAAACAAATGGGAGCCTGGTTACGAGTCAGCCTTCAGGGACTTGTCACATTTCTACTTGGTTTCTTCCTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000523953.5
ENST00000626824.1
CDS CCA 72 bp GGAATGCCCCACATTGATAATTTCTTTGGCTGTGGCTaGGTTGTAGGAGACACTAATAGGTTTCAGAGAGGT +
Preference number: 6 (lower is better)
Translates to: GMPHIDNFFGCG*VVGDTNRFQRG
Trigger: ACCTCTCTGAAACCTATTAGTGTCTCCTACAACCCAGCCACAGCCAAAGAAATTATCAATGTGGGGCATTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000431316.3
ENST00000517429.5
ENST00000517590.5
ENST00000517618.5
ENST00000518341.5
ENST00000520093.5
ENST00000520990.5
ENST00000521846.5
ENST00000522579.5
ENST00000522662.5
ENST00000522814.5
ENST00000523022.6
ENST00000523858.5
ENST00000523953.5
ENST00000542576.5
CDS CAA 72 bp GGGGACTGGTTATTTCCATTGGCAATGGGATACAGCTaGCTCCATTGTTCAGGACCATTTTTGTCATCATAT +
Preference number: 6 (lower is better)
Translates to: GDWLFPLAMGYS*LHCSGPFLSSY
Trigger: ATATGATGACAAAAATGGTCCTGAACAATGGAGCAAGCTGTATCCCATTGCCAATGGAAATAACCAGTCCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 14 transcripts:
ENST00000431316.3
ENST00000517429.5
ENST00000517590.5
ENST00000517618.5
ENST00000520093.5
ENST00000520990.5
ENST00000521846.5
ENST00000522579.5
ENST00000522662.5
ENST00000522814.5
ENST00000523022.6
ENST00000523858.5
ENST00000523953.5
ENST00000542576.5