Pregenerated sensors for C9ORF85 (Homo sapiens)
Ensembl gene IDs: ENSG00000155621Ensembl transcript IDs: ENST00000334731.7, ENST00000377027.1, ENST00000377031.7, ENST00000473252.5, ENST00000479413.1, ENST00000486911.2
Found 192 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGCCACCTCCCAAAGGCAGAGCTGCCGCAACCTGCCTGGCCCATGTaGTGGCAAGTCACCCAGTCAGGAGACACCCTGGCCAGTAGTTTA | + |
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Preference number: 1 (lower is better) Translates to: SHLPKAELPQPAWPM*WQVTQSGDTLASSL Trigger: TAAACTACTGGCCAGGGTGTCTCCTGACTGGGTGACTTGCCACCACATGGGCCAGGCAGGTTGCGGCAGCTCTGCCTTTGGGAGGTGGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000486911.2 |
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| 3UTR TCA 90 bp | TCCAACAGTTGTGGCCCACATCTGCCAGTTAGACAGCCCTGTGCCTaGGTCTGTAGCGCAACAGCTGTGGGGCTGGGTGTGAGCCTGTCC | + |
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Preference number: 1 (lower is better) Translates to: SNSCGPHLPVRQPCA*VCSATAVGLGVSLS Trigger: GGACAGGCTCACACCCAGCCCCACAGCTGTTGCGCTACAGACTCAGGCACAGGGCTGTCTAACTGGCAGATGTGGGCCACAACTGTTGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000486911.2 |
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| 3UTR CCA 90 bp | CACCTCCCAAAGGCAGAGCTGCCGCAACCTGCCTGGCCCATGTGGTaGCAAGTCACCCAGTCAGGAGACACCCTGGCCAGTAGTTTATCT | + |
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Preference number: 1 (lower is better) Translates to: HLPKAELPQPAWPMW*QVTQSGDTLASSLS Trigger: AGATAAACTACTGGCCAGGGTGTCTCCTGACTGGGTGACTTGCCACCACATGGGCCAGGCAGGTTGCGGCAGCTCTGCCTTTGGGAGGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000486911.2 |
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| 3UTR TCA 90 bp | GGACCTTTGCCTGCTGAGCCATTTTGGCCTGCCTTAGTGGCTCCCTaGACTGTATCAGGGTGTCACATGGCAGGAGAGCTTTGCCCGTGG | + |
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Preference number: 1 (lower is better) Translates to: GPLPAEPFWPALVAP*TVSGCHMAGELCPW Trigger: CCACGGGCAAAGCTCTCCTGCCATGTGACACCCTGATACAGTTCAGGGAGCCACTAAGGCAGGCCAAAATGGCTCAGCAGGCAAAGGTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000486911.2 |
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| 3UTR TCA 90 bp | AGCCCTGTGCCTGAGTCTGTAGCGCAACAGCTGTGGGGCTGGGTGTaGGCCTGTCCTCCTAGCTATGCTAAGCATGCTGTAATGACACAC | + |
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Preference number: 1 (lower is better) Translates to: SPVPESVAQQLWGWV*ACPPSYAKHAVMTH Trigger: GTGTGTCATTACAGCATGCTTAGCATAGCTAGGAGGACAGGCTCACACCCAGCCCCACAGCTGTTGCGCTACAGACTCAGGCACAGGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000486911.2 |
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| 3UTR GCA 90 bp | TCGTGCTTAACCACAATACTGTTACCACACCTGCAGTTCAACTCCTaGTGTGTGGCCCAGTTCCTGACAGGCCATGGACCGATGCGGGGG | + |
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Preference number: 1 (lower is better) Translates to: SCLTTILLPHLQFNS*CVAQFLTGHGPMRG Trigger: CCCCCGCATCGGTCCATGGCCTGTCAGGAACTGGGCCACACAGCAGGAGTTGAACTGCAGGTGTGGTAACAGTATTGTGGTTAAGCACGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000473252.5 |
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| 3UTR GCA 90 bp | TTCCCAAATATGGCTGGCTTGTCTCCAACAGTTGTGGCCCACATCTaGCAGTTAGACAGCCCTGTGCCTGAGTCTGTAGCGCAACAGCTG | + |
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Preference number: 1 (lower is better) Translates to: FPNMAGLSPTVVAHI*QLDSPVPESVAQQL Trigger: CAGCTGTTGCGCTACAGACTCAGGCACAGGGCTGTCTAACTGGCAGATGTGGGCCACAACTGTTGGAGACAAGCCAGCCATATTTGGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000486911.2 |
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| 3UTR CCA 90 bp | CTGCCTGGCCCATGTGGTGGCAAGTCACCCAGTCAGGAGACACCCTaGCCAGTAGTTTATCTCTTTCTTCCACATCTCTCCTATAACACA | + |
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Preference number: 1 (lower is better) Translates to: LPGPCGGKSPSQETP*PVVYLFLPHLSYNT Trigger: TGTGTTATAGGAGAGATGTGGAAGAAAGAGATAAACTACTGGCCAGGGTGTCTCCTGACTGGGTGACTTGCCACCACATGGGCCAGGCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000486911.2 |
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| 3UTR GCA 90 bp | GAAACAGGCTGTGGAATTCCTTTCGGCACCCTGAATGTTAACCCCTaGTCAGGAAAGGGTGCATCTGTCTTCATCATGCCTCTCTCTCCT | + |
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Preference number: 1 (lower is better) Translates to: ETGCGIPFGTLNVNP*SGKGASVFIMPLSP Trigger: AGGAGAGAGAGGCATGATGAAGACAGATGCACCCTTTCCTGAGCAGGGGTTAACATTCAGGGTGCCGAAAGGAATTCCACAGCCTGTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000486911.2 |
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| 3UTR TCA 90 bp | GACAAGAGAGATGGGAAACAGGCTGTGGAATTCCTTTCGGCACCCTaGATGTTAACCCCTGCTCAGGAAAGGGTGCATCTGTCTTCATCA | + |
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Preference number: 1 (lower is better) Translates to: DKRDGKQAVEFLSAP*MLTPAQERVHLSSS Trigger: TGATGAAGACAGATGCACCCTTTCCTGAGCAGGGGTTAACATTCAGGGTGCCGAAAGGAATTCCACAGCCTGTTTCCCATCTCTCTTGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000486911.2 |
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| 3UTR TCA 90 bp | GAAATCACAACTGCACACACAACAGGTGCTCTACAGTTTTGTAAATaGTGCAGTATGTGCCCAGGCGTGGCAGCAGATAGACTTTCAGGC | + |
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Preference number: 1 (lower is better) Translates to: EITTAHTTGALQFCK*CSMCPGVAADRLSG Trigger: GCCTGAAAGTCTATCTGCTGCCACGCCTGGGCACATACTGCATCATTTACAAAACTGTAGAGCACCTGTTGTGTGTGCAGTTGTGATTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000486911.2 |
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| 3UTR GCA 90 bp | ATTATAGCAACACCTAGTGGCTTGAGAAGGCCAGGTCTAGAGGTATaGATTTACGGCTGGGAAACACTGACCTTTAGCTTTGAAGACCTC | + |
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Preference number: 1 (lower is better) Translates to: IIATPSGLRRPGLEV*IYGWETLTFSFEDL Trigger: GAGGTCTTCAAAGCTAAAGGTCAGTGTTTCCCAGCCGTAAATGCATACCTCTAGACCTGGCCTTCTCAAGCCACTAGGTGTTGCTATAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000486911.2 |
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| 3UTR GCA 90 bp | CAGAATCTTTGGAGGAAGAGGCCAGGATTGGTAGGTTATAAAAGTTaGCCAGATGATTTTAATGTGCAGCCAAGGCTAAGAGCTACTTAT | + |
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Preference number: 1 (lower is better) Translates to: QNLWRKRPGLVGYKS*PDDFNVQPRLRATY Trigger: ATAAGTAGCTCTTAGCCTTGGCTGCACATTAAAATCATCTGGGCAACTTTTATAACCTACCAATCCTGGCCTCTTCCTCCAAAGATTCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000486911.2 |
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| 3UTR GCA 90 bp | ATGTTTGGAGAGGTGGGTGAGGTAACTCTTTTCCATAAACGTATTTaGAAAAACGTAAACATCCTGAGAAAGCGGAAGCAGAACACATAC | + |
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Preference number: 1 (lower is better) Translates to: MFGEVGEVTLFHKRI*KNVNILRKRKQNTY Trigger: GTATGTGTTCTGCTTCCGCTTTCTCAGGATGTTTACGTTTTTGCAAATACGTTTATGGAAAAGAGTTACCTCACCCACCTCTCCAAACAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000486911.2 |
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| 3UTR TCA 90 bp | ACAATTACTTTCCTCTCATCAGATATATCTAAGCTTGGATACTGCTaGATGTTATGCCATTTGAAGCTATGTAAAGAGATCACTCCCCCG | + |
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Preference number: 1 (lower is better) Translates to: TITFLSSDISKLGYC*MLCHLKLCKEITPP Trigger: CGGGGGAGTGATCTCTTTACATAGCTTCAAATGGCATAACATTCAGCAGTATCCAAGCTTAGATATATCTGATGAGAGGAAAGTAATTGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000486911.2 |
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| 3UTR TCA 90 bp | AAGAAATACATTTTCCTCCTCCTCATCCATATCCAAAGACGGTTCTaGAAATGCCTTTTCTTCTCTATTATAGCAACACCTAGTGGCTTG | + |
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Preference number: 1 (lower is better) Translates to: KKYIFLLLIHIQRRF*KCLFFSIIATPSGL Trigger: CAAGCCACTAGGTGTTGCTATAATAGAGAAGAAAAGGCATTTTCAGAACCGTCTTTGGATATGGATGAGGAGGAGGAAAATGTATTTCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000486911.2 |
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| 3UTR CCA 90 bp | GATTTTAATGTGCAGCCAAGGCTAAGAGCTACTTATCTAGACCAGTaGTTTGCAAACTTTTGTCAAATAATCAGAATCGCGTTTCAAACA | + |
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Preference number: 1 (lower is better) Translates to: DFNVQPRLRATYLDQ*FANFCQIIRIAFQT Trigger: TGTTTGAAACGCGATTCTGATTATTTGACAAAAGTTTGCAAACCACTGGTCTAGATAAGTAGCTCTTAGCCTTGGCTGCACATTAAAATC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000486911.2 |
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| 3UTR TCA 90 bp | CATCAGATATATCTAAGCTTGGATACTGCTGAATGTTATGCCATTTaGAGCTATGTAAAGAGATCACTCCCCCGCAATAAAAATGTAAAA | + |
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Preference number: 1 (lower is better) Translates to: HQIYLSLDTAECYAI*SYVKRSLPRNKNVK Trigger: TTTTACATTTTTATTGCGGGGGAGTGATCTCTTTACATAGCTTCAAATGGCATAACATTCAGCAGTATCCAAGCTTAGATATATCTGATG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000486911.2 |
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| 3UTR-3UTR TCA 90 bp | ACGAACTCAGCTCACTTCAATCTCCGCCTCCAGGGTTCAAGCAATCCTCCTGCCCTGGTCTCGAACTCCTaGCCTCAGGTGATCCACCCT | + |
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Preference number: 2 (lower is better) Translates to: TNSAHFNLRLQGSSNPPALVSNS*PQVIHP Trigger: AGGGTGGATCACCTGAGGTCAGGAGTTCGAGACCAG...GGCAGGAGGATTGCTTGAACCCTGGAGGCGGAGATTGAAGTGAGCTGAGTTCGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000334731.7 ENST00000479413.1 |
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| 3UTR-3UTR GCA 90 bp | CTACCCTGGCAGCTTGGACCTTTGCCTGCTGAGCCATTTTGGCCTGCCTTAGTGCTGAAATGGTGCCACTaGACTCCAGCCCGGGCTATA | + |
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Preference number: 2 (lower is better) Translates to: LPWQLGPLPAEPFWPALVLKWCH*TPARAI Trigger: TATAGCCCGGGCTGGAGTGCAGTGGCACCATTTCAG...CACTAAGGCAGGCCAAAATGGCTCAGCAGGCAAAGGTCCAAGCTGCCAGGGTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000486911.2 |
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| 3UTR-3UTR GCA 90 bp | TGCTGGGCCCCGCCCACAGAGTATGTTTCAGTAGGTCTAGGGCAGAGCCCAAGACTGCTCAGGAAAGGGTaGATCTGTCTTCATCATGCC | + |
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Preference number: 2 (lower is better) Translates to: CWAPPTEYVSVGLGQSPRLLRKG*ICLHHA Trigger: GGCATGATGAAGACAGATGCACCCTTTCCTGAGCAG...TCTTGGGCTCTGCCCTAGACCTACTGAAACATACTCTGTGGGCGGGGCCCAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000486911.2 |
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| 3UTR-3UTR TCA 90 bp | TGTAATGGCACGAACTCAGCTCACTTCAATCTCCGCCTCCAGGGTTCAAGCAATCTGGTCTCGAACTCCTaGCCTCAGGTGATCCACCCT | + |
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Preference number: 2 (lower is better) Translates to: CNGTNSAHFNLRLQGSSNLVSNS*PQVIHP Trigger: AGGGTGGATCACCTGAGGTCAGGAGTTCGAGACCAG...ATTGCTTGAACCCTGGAGGCGGAGATTGAAGTGAGCTGAGTTCGTGCCATTACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000334731.7 ENST00000479413.1 |
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| 3UTR-3UTR TCA 90 bp | TGGCTTGAGAAGGCCAGGTCTAGAGGTATGCATTTACGGCTGGGAAACACTGACCACAAAGTCCCTGATTaGATCACCTCCTCCTTCCAG | + |
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Preference number: 2 (lower is better) Translates to: WLEKARSRGMHLRLGNTDHKVPD*ITSSFQ Trigger: CTGGAAGGAGGAGGTGATTCAATCAGGGACTTTGTG...GTCAGTGTTTCCCAGCCGTAAATGCATACCTCTAGACCTGGCCTTCTCAAGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000486911.2 |
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| 3UTR-3UTR TCA 90 bp | TGGCTTGAGAAGGCCAGGTCTAGAGGTATGCATTTACGGCTGGGAAACACTGACTGCAGGCCAGACAGTTaGAGCAATTTGCTGGAGTCA | + |
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Preference number: 2 (lower is better) Translates to: WLEKARSRGMHLRLGNTDCRPDS*SNLLES Trigger: TGACTCCAGCAAATTGCTTCAACTGTCTGGCCTGCA...GTCAGTGTTTCCCAGCCGTAAATGCATACCTCTAGACCTGGCCTTCTCAAGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000486911.2 |
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| 3UTR-3UTR GCA 90 bp | TGCTGGGCCCCGCCCACAGAGTATGTTTCAGTAGGTCTAGGGCAGAGCCCAAGATACCAAAACGATCTCTaGAACTACAGTGGTTACATC | + |
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Preference number: 2 (lower is better) Translates to: CWAPPTEYVSVGLGQSPRYQNDL*NYSGYI Trigger: GATGTAACCACTGTAGTTGCAGAGATCGTTTTGGTA...TCTTGGGCTCTGCCCTAGACCTACTGAAACATACTCTGTGGGCGGGGCCCAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000486911.2 |
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| 3UTR-3UTR CCA 90 bp | GGACAAGAGAGATGGGAAACAGGCTGTGGAATTCCTTTCGGCACCCTGAATGTTGGAGAGCTTTGCCCGTaGAGCTGGGGAATCTGTATT | + |
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Preference number: 2 (lower is better) Translates to: GQERWETGCGIPFGTLNVGELCP*SWGICI Trigger: AATACAGATTCCCCAGCTCCACGGGCAAAGCTCTCC...AACATTCAGGGTGCCGAAAGGAATTCCACAGCCTGTTTCCCATCTCTCTTGTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000486911.2 |
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| 3UTR-3UTR TCA 90 bp | ACAATAAGATTTTCCCAAATATGGCTGGCTTGTCTCCAACAGTTGTGGCCCACAAGACAGCCCTGTGCCTaGGTCTGTAGCGCAACAGCT | + |
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Preference number: 2 (lower is better) Translates to: TIRFSQIWLACLQQLWPTRQPCA*VCSATA Trigger: AGCTGTTGCGCTACAGACTCAGGCACAGGGCTGTCT...TGTGGGCCACAACTGTTGGAGACAAGCCAGCCATATTTGGGAAAATCTTATTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000486911.2 |
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| 3UTR-3UTR CCA 90 bp | GCCCACATCTGCCAGTTAGACAGCCCTGTGCCTGAGTCTGTAGCGCAACAGCTGTCTCTGCAACTACAGTaGTTACATCAACAGTTTCTT | + |
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Preference number: 2 (lower is better) Translates to: AHICQLDSPVPESVAQQLSLQLQ*LHQQFL Trigger: AAGAAACTGTTGATGTAACCACTGTAGTTGCAGAGA...CAGCTGTTGCGCTACAGACTCAGGCACAGGGCTGTCTAACTGGCAGATGTGGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000486911.2 |
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| 3UTR-3UTR CCA 90 bp | TTGATGCTGCTAGTCCAGAAACCACATGATAAGAACCACCGATCTAGACTAAGTGCCTGGCCCATGTGGTaGCAAGTCACCCAGTCAGGA | + |
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Preference number: 2 (lower is better) Translates to: LMLLVQKPHDKNHRSRLSAWPMW*QVTQSG Trigger: TCCTGACTGGGTGACTTGCCACCACATGGGCCAGGC...ACTTAGTCTAGATCGGTGGTTCTTATCATGTGGTTTCTGGACTAGCAGCATCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000486911.2 |
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| 3UTR-3UTR CCA 90 bp | GCATTTCTAACAAGTTTCCCAGGTAATATTGATGCTGCTAGTCCAGAAACCACACTGCCGCAACCTGCCTaGCCCATGTGGTGGCAAGTC | + |
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Preference number: 2 (lower is better) Translates to: AFLTSFPGNIDAASPETTLPQPA*PMWWQV Trigger: GACTTGCCACCACATGGGCCAGGCAGGTTGCGGCAG...TGTGGTTTCTGGACTAGCAGCATCAATATTACCTGGGAAACTTGTTAGAAATGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000486911.2 |
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| 3UTR CAA 90 bp | CTCACACTTGCCCCTTACAATAAGATTTTCCCAAATATGGCTGGCTaGTCTCCAACAGTTGTGGCCCACATCTGCCAGTTAGACAGCCCT | + |
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Preference number: 2 (lower is better) Translates to: LTLAPYNKIFPNMAG*SPTVVAHICQLDSP Trigger: AGGGCTGTCTAACTGGCAGATGTGGGCCACAACTGTTGGAGACAAGCCAGCCATATTTGGGAAAATCTTATTGTAAGGGGCAAGTGTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000486911.2 |
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| 3UTR-3UTR CCA 90 bp | CTACCCTGGCAGCTTGGACCTTTGCCTGCTGAGCCATTTTGGCCTGCCTTAGTGTCTAAAGTACACTTCTaGGAAGTGTGGACATTTTCA | + |
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Preference number: 2 (lower is better) Translates to: LPWQLGPLPAEPFWPALVSKVHF*EVWTFS Trigger: TGAAAATGTCCACACTTCCCAGAAGTGTACTTTAGA...CACTAAGGCAGGCCAAAATGGCTCAGCAGGCAAAGGTCCAAGCTGCCAGGGTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000486911.2 |
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| 3UTR-3UTR CCA 90 bp | TGCAAAAACGTAAACATCCTGAGAAAGCGGAAGCAGAACACATACACGAGGACCTATCAGGGTGTCACATaGCAGGAGAGCTTTGCCCGT | + |
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Preference number: 2 (lower is better) Translates to: CKNVNILRKRKQNTYTRTYQGVT*QESFAR Trigger: ACGGGCAAAGCTCTCCTGCCATGTGACACCCTGATA...GGTCCTCGTGTATGTGTTCTGCTTCCGCTTTCTCAGGATGTTTACGTTTTTGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000486911.2 |
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| 3UTR-3UTR CCA 90 bp | CAGTCAGGAGACACCCTGGCCAGTAGTTTATCTCTTTCTTCCACATCTCTCCTAAATGACACACTACCCTaGCAGCTTGGACCTTTGCCT | + |
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Preference number: 2 (lower is better) Translates to: QSGDTLASSLSLSSTSLLNDTLP*QLGPLP Trigger: AGGCAAAGGTCCAAGCTGCCAGGGTAGTGTGTCATT...TAGGAGAGATGTGGAAGAAAGAGATAAACTACTGGCCAGGGTGTCTCCTGACTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000486911.2 |
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| 3UTR-3UTR CCA 90 bp | TGGCTTGAGAAGGCCAGGTCTAGAGGTATGCATTTACGGCTGGGAAACACTGACAGTCAGGAGACACCCTaGCCAGTAGTTTATCTCTTT | + |
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Preference number: 2 (lower is better) Translates to: WLEKARSRGMHLRLGNTDSQETP*PVVYLF Trigger: AAAGAGATAAACTACTGGCCAGGGTGTCTCCTGACT...GTCAGTGTTTCCCAGCCGTAAATGCATACCTCTAGACCTGGCCTTCTCAAGCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000486911.2 |
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| 3UTR CAA 90 bp | CATCCTGAGAAAGCGGAAGCAGAACACATACACGAGGACCAGTACTaGATGAGGACAAGAGAGATGGGAAACAGGCTGTGGAATTCCTTT | + |
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Preference number: 2 (lower is better) Translates to: HPEKAEAEHIHEDQY*MRTREMGNRLWNSF Trigger: AAAGGAATTCCACAGCCTGTTTCCCATCTCTCTTGTCCTCATCAAGTACTGGTCCTCGTGTATGTGTTCTGCTTCCGCTTTCTCAGGATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000486911.2 |
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| 3UTR-3UTR GCA 90 bp | CAGTCAGGAGACACCCTGGCCAGTAGTTTATCTCTTTCTTCCACATCTCTCCTAGCATCAACCAGAGATTaGAGGTGCAGAGCATTCTCA | + |
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Preference number: 2 (lower is better) Translates to: QSGDTLASSLSLSSTSLLASTRD*RCRAFS Trigger: TGAGAATGCTCTGCACCTGCAATCTCTGGTTGATGC...TAGGAGAGATGTGGAAGAAAGAGATAAACTACTGGCCAGGGTGTCTCCTGACTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000486911.2 |
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| 3UTR-3UTR CCA 90 bp | TGGCTTGAGAAGGCCAGGTCTAGAGGTATGCATTTACGGCTGGGAAACACTGACCTTTGCCCGTGGAGCTaGGGAATCTGTATTTTAAAT | + |
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Preference number: 2 (lower is better) Translates to: WLEKARSRGMHLRLGNTDLCPWS*GICILN Trigger: ATTTAAAATACAGATTCCCCAGCTCCACGGGCAAAG...GTCAGTGTTTCCCAGCCGTAAATGCATACCTCTAGACCTGGCCTTCTCAAGCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000486911.2 |
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| 3UTR-3UTR CCA 90 bp | CAATTTGCTGGAGTCATGGAGTCAGATAGTGACAAAGTTGTAACTAGAACAAAGCCTGCCTGGCCCATGTaGTGGCAAGTCACCCAGTCA | + |
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Preference number: 2 (lower is better) Translates to: QFAGVMESDSDKVVTRTKPAWPM*WQVTQS Trigger: TGACTGGGTGACTTGCCACCACATGGGCCAGGCAGG...CTTTGTTCTAGTTACAACTTTGTCACTATCTGACTCCATGACTCCAGCAAATTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000486911.2 |
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| 3UTR-3UTR TCA 90 bp | TTGATGCTGCTAGTCCAGAAACCACATGATAAGAACCACCGATCTAGACTAAGTAGGCAGAGGTTGCATTaGGCTGAAATGGTGCCACTG | + |
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Preference number: 2 (lower is better) Translates to: LMLLVQKPHDKNHRSRLSRQRLH*AEMVPL Trigger: CAGTGGCACCATTTCAGCTCAATGCAACCTCTGCCT...ACTTAGTCTAGATCGGTGGTTCTTATCATGTGGTTTCTGGACTAGCAGCATCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000486911.2 |
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| 3UTR-3UTR TCA 90 bp | CAGTCAGGAGACACCCTGGCCAGTAGTTTATCTCTTTCTTCCACATCTCTCCTACTTTCACAAAGTCCCTaGTTGAATCACCTCCTCCTT | + |
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Preference number: 2 (lower is better) Translates to: QSGDTLASSLSLSSTSLLLSQSP*LNHLLL Trigger: AAGGAGGAGGTGATTCAATCAGGGACTTTGTGAAAG...TAGGAGAGATGTGGAAGAAAGAGATAAACTACTGGCCAGGGTGTCTCCTGACTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000486911.2 |
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| 3UTR-3UTR CCA 90 bp | GGACAAGAGAGATGGGAAACAGGCTGTGGAATTCCTTTCGGCACCCTGAATGTTTTTCCCAAATATGGCTaGCTTGTCTCCAACAGTTGT | + |
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Preference number: 2 (lower is better) Translates to: GQERWETGCGIPFGTLNVFPKYG*LVSNSC Trigger: ACAACTGTTGGAGACAAGCCAGCCATATTTGGGAAA...AACATTCAGGGTGCCGAAAGGAATTCCACAGCCTGTTTCCCATCTCTCTTGTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000486911.2 |
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| 3UTR-3UTR GCA 90 bp | TTGATGCTGCTAGTCCAGAAACCACATGATAAGAACCACCGATCTAGACTAAGTCTAGGAGGCAGAGGTTaGATTGAGCTGAAATGGTGC | + |
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Preference number: 2 (lower is better) Translates to: LMLLVQKPHDKNHRSRLSLGGRG*IELKWC Trigger: GCACCATTTCAGCTCAATGCAACCTCTGCCTCCTAG...ACTTAGTCTAGATCGGTGGTTCTTATCATGTGGTTTCTGGACTAGCAGCATCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000486911.2 |
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| 3UTR-3UTR CCA 90 bp | GCATTTCTAACAAGTTTCCCAGGTAATATTGATGCTGCTAGTCCAGAAACCACAGTATGTGCCCAGGCGTaGCAGCAGATAGACTTTCAG | + |
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Preference number: 2 (lower is better) Translates to: AFLTSFPGNIDAASPETTVCAQA*QQIDFQ Trigger: CTGAAAGTCTATCTGCTGCCACGCCTGGGCACATAC...TGTGGTTTCTGGACTAGCAGCATCAATATTACCTGGGAAACTTGTTAGAAATGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000486911.2 |
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| 3UTR-3UTR CCA 90 bp | AGTTGCCCAGATGATTTTAATGTGCAGCCAAGGCTAAGAGCTACTTATCTAGACATGGGAAACAGGCTGTaGAATTCCTTTCGGCACCCT | + |
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Preference number: 2 (lower is better) Translates to: SCPDDFNVQPRLRATYLDMGNRL*NSFRHP Trigger: AGGGTGCCGAAAGGAATTCCACAGCCTGTTTCCCAT...GTCTAGATAAGTAGCTCTTAGCCTTGGCTGCACATTAAAATCATCTGGGCAACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000486911.2 |
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| 3UTR-3UTR CCA 90 bp | GCATTTCTAACAAGTTTCCCAGGTAATATTGATGCTGCTAGTCCAGAAACCACACACAAGGTCAGTAGATaGAGACCATCCTGGCCAACA | + |
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Preference number: 2 (lower is better) Translates to: AFLTSFPGNIDAASPETTHKVSR*RPSWPT Trigger: TGTTGGCCAGGATGGTCTCCATCTACTGACCTTGTG...TGTGGTTTCTGGACTAGCAGCATCAATATTACCTGGGAAACTTGTTAGAAATGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000486911.2 |
||
| 3UTR-3UTR TCA 90 bp | AGTTGCCCAGATGATTTTAATGTGCAGCCAAGGCTAAGAGCTACTTATCTAGACCTACAGTTTTGTAAATaGTGCAGTATGTGCCCAGGC | + |
|
Preference number: 2 (lower is better) Translates to: SCPDDFNVQPRLRATYLDLQFCK*CSMCPG Trigger: GCCTGGGCACATACTGCATCATTTACAAAACTGTAG...GTCTAGATAAGTAGCTCTTAGCCTTGGCTGCACATTAAAATCATCTGGGCAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000486911.2 |
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| 3UTR-3UTR TCA 90 bp | ACTCTTTTCCATAAACGTATTTGCAAAAACGTAAACATCCTGAGAAAGCGGAAGTTCCTTTCGGCACCCTaGATGTTAACCCCTGCTCAG | + |
|
Preference number: 2 (lower is better) Translates to: TLFHKRICKNVNILRKRKFLSAP*MLTPAQ Trigger: CTGAGCAGGGGTTAACATTCAGGGTGCCGAAAGGAA...CTTCCGCTTTCTCAGGATGTTTACGTTTTTGCAAATACGTTTATGGAAAAGAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000486911.2 |
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| 3UTR-3UTR TCA 90 bp | AGTTGCCCAGATGATTTTAATGTGCAGCCAAGGCTAAGAGCTACTTATCTAGACAATGGGCAACACATCTaGATAGACATTTCACCAGTG | + |
|
Preference number: 2 (lower is better) Translates to: SCPDDFNVQPRLRATYLDNGQHI*IDISPV Trigger: CACTGGTGAAATGTCTATTCAGATGTGTTGCCCATT...GTCTAGATAAGTAGCTCTTAGCCTTGGCTGCACATTAAAATCATCTGGGCAACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000486911.2 |
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| 3UTR-3UTR TCA 90 bp | ACAATAAGATTTTCCCAAATATGGCTGGCTTGTCTCCAACAGTTGTGGCCCACAACTGGCATCTCACTTTaGCTTAAAGATGATGAAAGC | + |
|
Preference number: 2 (lower is better) Translates to: TIRFSQIWLACLQQLWPTTGISL*LKDDES Trigger: GCTTTCATCATCTTTAAGTCAAAGTGAGATGCCAGT...TGTGGGCCACAACTGTTGGAGACAAGCCAGCCATATTTGGGAAAATCTTATTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000486911.2 |
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| 3UTR-3UTR GCA 90 bp | GCATTTCTAACAAGTTTCCCAGGTAATATTGATGCTGCTAGTCCAGAAACCACAAGAGAGAAAGGAAACTaGATCAACCAGAGATTGCAG | + |
|
Preference number: 2 (lower is better) Translates to: AFLTSFPGNIDAASPETTREKGN*INQRLQ Trigger: CTGCAATCTCTGGTTGATGCAGTTTCCTTTCTCTCT...TGTGGTTTCTGGACTAGCAGCATCAATATTACCTGGGAAACTTGTTAGAAATGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000486911.2 |
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| 3UTR-3UTR GCA 90 bp | ACTCTTTTCCATAAACGTATTTGCAAAAACGTAAACATCCTGAGAAAGCGGAAGCTGAATGTTAACCCCTaGTCAGGAAAGGGTGCATCT | + |
|
Preference number: 2 (lower is better) Translates to: TLFHKRICKNVNILRKRKLNVNP*SGKGAS Trigger: AGATGCACCCTTTCCTGAGCAGGGGTTAACATTCAG...CTTCCGCTTTCTCAGGATGTTTACGTTTTTGCAAATACGTTTATGGAAAAGAGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000486911.2 |
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| 3UTR-3UTR CCA 90 bp | AGTTGCCCAGATGATTTTAATGTGCAGCCAAGGCTAAGAGCTACTTATCTAGACAATTTGCTGGAGTCATaGAGTCAGATAGTGACAAAG | + |
|
Preference number: 2 (lower is better) Translates to: SCPDDFNVQPRLRATYLDNLLES*SQIVTK Trigger: CTTTGTCACTATCTGACTCCATGACTCCAGCAAATT...GTCTAGATAAGTAGCTCTTAGCCTTGGCTGCACATTAAAATCATCTGGGCAACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000486911.2 |
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| 3UTR-3UTR GCA 90 bp | AAAGGCCTCACAATTACTTTCCTCTCATCAGATATATCTAAGCTTGGATACTGCGACTTAAGGACTGTCTaGTATGGAATAAAAGGCAGC | + |
|
Preference number: 2 (lower is better) Translates to: KGLTITFLSSDISKLGYCDLRTV*YGIKGS Trigger: GCTGCCTTTTATTCCATAGCAGACAGTCCTTAAGTC...GCAGTATCCAAGCTTAGATATATCTGATGAGAGGAAAGTAATTGTGAGGCCTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000486911.2 |
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| 3UTR-3UTR CCA 90 bp | AAAGAGGGTCTAGAATATACCAAAACGATCTCTGCAACTACAGTGGTTACATCAAATACAAAAATTAGCTaGGCATGGTGGTGTGTGCCT | + |
|
Preference number: 2 (lower is better) Translates to: KEGLEYTKTISATTVVTSNTKIS*AWWCVP Trigger: AGGCACACACCACCATGCCCAGCTAATTTTTGTATT...TGATGTAACCACTGTAGTTGCAGAGATCGTTTTGGTATATTCTAGACCCTCTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000486911.2 |
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| 3UTR-3UTR CCA 90 bp | AAAGGCCTCACAATTACTTTCCTCTCATCAGATATATCTAAGCTTGGATACTGCAGATTTTCCCAAATATaGCTGGCTTGTCTCCAACAG | + |
|
Preference number: 2 (lower is better) Translates to: KGLTITFLSSDISKLGYCRFSQI*LACLQQ Trigger: CTGTTGGAGACAAGCCAGCCATATTTGGGAAAATCT...GCAGTATCCAAGCTTAGATATATCTGATGAGAGGAAAGTAATTGTGAGGCCTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000486911.2 |
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| 3UTR-3UTR CCA 90 bp | AGTTGCCCAGATGATTTTAATGTGCAGCCAAGGCTAAGAGCTACTTATCTAGACGATTTATTCTACCAATaGGAACAGAGAAGAGAGAAA | + |
|
Preference number: 2 (lower is better) Translates to: SCPDDFNVQPRLRATYLDDLFYQ*EQRREK Trigger: TTTCTCTCTTCTCTGTTCCCATTGGTAGAATAAATC...GTCTAGATAAGTAGCTCTTAGCCTTGGCTGCACATTAAAATCATCTGGGCAACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000486911.2 |
||
| 3UTR-3UTR TCA 90 bp | ACTCTTTTCCATAAACGTATTTGCAAAAACGTAAACATCCTGAGAAAGCGGAAGTGGCTAATAAACACATaGAAAGATGTTCAGTCGGCT | + |
|
Preference number: 2 (lower is better) Translates to: TLFHKRICKNVNILRKRKWLINT*KDVQSA Trigger: AGCCGACTGAACATCTTTTCATGTGTTTATTAGCCA...CTTCCGCTTTCTCAGGATGTTTACGTTTTTGCAAATACGTTTATGGAAAAGAGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000486911.2 |
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| 3UTR-3UTR GCA 90 bp | ACTCTTTTCCATAAACGTATTTGCAAAAACGTAAACATCCTGAGAAAGCGGAAGATAAGAAATCACAACTaGACACACAACAGGTGCTCT | + |
|
Preference number: 2 (lower is better) Translates to: TLFHKRICKNVNILRKRKIRNHN*THNRCS Trigger: AGAGCACCTGTTGTGTGTGCAGTTGTGATTTCTTAT...CTTCCGCTTTCTCAGGATGTTTACGTTTTTGCAAATACGTTTATGGAAAAGAGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000486911.2 |
||
| 3UTR CCA 72 bp | CCAAAGGCAGAGCTGCCGCAACCTGCCTGGCCCATGTaGTGGCAAGTCACCCAGTCAGGAGACACCCTGGCC | + |
|
Preference number: 3 (lower is better) Translates to: PKAELPQPAWPM*WQVTQSGDTLA Trigger: GGCCAGGGTGTCTCCTGACTGGGTGACTTGCCACCACATGGGCCAGGCAGGTTGCGGCAGCTCTGCCTTTGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000486911.2 |
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| 3UTR CCA 72 bp | AAGGCAGAGCTGCCGCAACCTGCCTGGCCCATGTGGTaGCAAGTCACCCAGTCAGGAGACACCCTGGCCAGT | + |
|
Preference number: 3 (lower is better) Translates to: KAELPQPAWPMW*QVTQSGDTLAS Trigger: ACTGGCCAGGGTGTCTCCTGACTGGGTGACTTGCCACCACATGGGCCAGGCAGGTTGCGGCAGCTCTGCCTT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000486911.2 |
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| 3UTR CCA 72 bp | AGCCACCTCCCAAAGGCAGAGCTGCCGCAACCTGCCTaGCCCATGTGGTGGCAAGTCACCCAGTCAGGAGAC | + |
|
Preference number: 3 (lower is better) Translates to: SHLPKAELPQPA*PMWWQVTQSGD Trigger: GTCTCCTGACTGGGTGACTTGCCACCACATGGGCCAGGCAGGTTGCGGCAGCTCTGCCTTTGGGAGGTGGCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000486911.2 |
||
| 3UTR GCA 72 bp | ATGGCTGGCTTGTCTCCAACAGTTGTGGCCCACATCTaGCAGTTAGACAGCCCTGTGCCTGAGTCTGTAGCG | + |
|
Preference number: 3 (lower is better) Translates to: MAGLSPTVVAHI*QLDSPVPESVA Trigger: CGCTACAGACTCAGGCACAGGGCTGTCTAACTGGCAGATGTGGGCCACAACTGTTGGAGACAAGCCAGCCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000486911.2 |
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| 3UTR TCA 72 bp | CCTGCTGAGCCATTTTGGCCTGCCTTAGTGGCTCCCTaGACTGTATCAGGGTGTCACATGGCAGGAGAGCTT | + |
|
Preference number: 3 (lower is better) Translates to: PAEPFWPALVAP*TVSGCHMAGEL Trigger: AAGCTCTCCTGCCATGTGACACCCTGATACAGTTCAGGGAGCCACTAAGGCAGGCCAAAATGGCTCAGCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000486911.2 |
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| 3UTR-3UTR CAA 90 bp | GGACAAGAGAGATGGGAAACAGGCTGTGGAATTCCTTTCGGCACCCTGAATGTTCATGGCAGGAGAGCTTaGCCCGTGGAGCTGGGGAAT | + |
|
Preference number: 3 (lower is better) Translates to: GQERWETGCGIPFGTLNVHGRRA*PVELGN Trigger: ATTCCCCAGCTCCACGGGCAAAGCTCTCCTGCCATG...AACATTCAGGGTGCCGAAAGGAATTCCACAGCCTGTTTCCCATCTCTCTTGTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000486911.2 |
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| 3UTR TCA 72 bp | GATGGGAAACAGGCTGTGGAATTCCTTTCGGCACCCTaGATGTTAACCCCTGCTCAGGAAAGGGTGCATCTG | + |
|
Preference number: 3 (lower is better) Translates to: DGKQAVEFLSAP*MLTPAQERVHL Trigger: CAGATGCACCCTTTCCTGAGCAGGGGTTAACATTCAGGGTGCCGAAAGGAATTCCACAGCCTGTTTCCCATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000486911.2 |
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| 3UTR CCA 72 bp | CCATGTGGTGGCAAGTCACCCAGTCAGGAGACACCCTaGCCAGTAGTTTATCTCTTTCTTCCACATCTCTCC | + |
|
Preference number: 3 (lower is better) Translates to: PCGGKSPSQETP*PVVYLFLPHLS Trigger: GGAGAGATGTGGAAGAAAGAGATAAACTACTGGCCAGGGTGTCTCCTGACTGGGTGACTTGCCACCACATGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000486911.2 |
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| 3UTR-3UTR CAA 90 bp | GGACAAGAGAGATGGGAAACAGGCTGTGGAATTCCTTTCGGCACCCTGAATGTTGTGGACAAGAGCAACTaGAGGGGGAAGAAACCCCAA | + |
|
Preference number: 3 (lower is better) Translates to: GQERWETGCGIPFGTLNVVDKSN*RGKKPQ Trigger: TTGGGGTTTCTTCCCCCTCAAGTTGCTCTTGTCCAC...AACATTCAGGGTGCCGAAAGGAATTCCACAGCCTGTTTCCCATCTCTCTTGTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000486911.2 |
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| 3UTR-3UTR CAA 90 bp | AACGTAAACATCCTGAGAAAGCGGAAGCAGAACACATACACGAGGACCAGTACTTGGCAGCTTGGACCTTaGCCTGCTGAGCCATTTTGG | + |
|
Preference number: 3 (lower is better) Translates to: NVNILRKRKQNTYTRTSTWQLGP*PAEPFW Trigger: CCAAAATGGCTCAGCAGGCAAAGGTCCAAGCTGCCA...AGTACTGGTCCTCGTGTATGTGTTCTGCTTCCGCTTTCTCAGGATGTTTACGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000486911.2 |
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| 3UTR GCA 72 bp | GATGATGAAAGCCATTTCAGTCACTATCTCAGGGGATaGCACTTCCCTTACCTCCCCTGTCACGTTGGACAT | + |
|
Preference number: 3 (lower is better) Translates to: DDESHFSHYLRG*HFPYLPCHVGH Trigger: ATGTCCAACGTGACAGGGGAGGTAAGGGAAGTGGCATCCCCTGAGATAGTGACTGAAATGGCTTTCATCATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000486911.2 |
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| 3UTR GCA 72 bp | TGTGGAATTCCTTTCGGCACCCTGAATGTTAACCCCTaGTCAGGAAAGGGTGCATCTGTCTTCATCATGCCT | + |
|
Preference number: 3 (lower is better) Translates to: CGIPFGTLNVNP*SGKGASVFIMP Trigger: AGGCATGATGAAGACAGATGCACCCTTTCCTGAGCAGGGGTTAACATTCAGGGTGCCGAAAGGAATTCCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000486911.2 |
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| 3UTR-3UTR CAA 90 bp | AACGTAAACATCCTGAGAAAGCGGAAGCAGAACACATACACGAGGACCAGTACTACCTCCCCTGTCACGTaGGACATACCCACAATAGAC | + |
|
Preference number: 3 (lower is better) Translates to: NVNILRKRKQNTYTRTSTTSPVT*DIPTID Trigger: GTCTATTGTGGGTATGTCCAACGTGACAGGGGAGGT...AGTACTGGTCCTCGTGTATGTGTTCTGCTTCCGCTTTCTCAGGATGTTTACGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000486911.2 |
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| 3UTR TCA 72 bp | ACTGCACACACAACAGGTGCTCTACAGTTTTGTAAATaGTGCAGTATGTGCCCAGGCGTGGCAGCAGATAGA | + |
|
Preference number: 3 (lower is better) Translates to: TAHTTGALQFCK*CSMCPGVAADR Trigger: TCTATCTGCTGCCACGCCTGGGCACATACTGCATCATTTACAAAACTGTAGAGCACCTGTTGTGTGTGCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000486911.2 |
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| 3UTR GCA 72 bp | ACACCTAGTGGCTTGAGAAGGCCAGGTCTAGAGGTATaGATTTACGGCTGGGAAACACTGACCTTTAGCTTT | + |
|
Preference number: 3 (lower is better) Translates to: TPSGLRRPGLEV*IYGWETLTFSF Trigger: AAAGCTAAAGGTCAGTGTTTCCCAGCCGTAAATGCATACCTCTAGACCTGGCCTTCTCAAGCCACTAGGTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000486911.2 |
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| 3UTR CCA 72 bp | TTGAGAAGGCCAGGTCTAGAGGTATGCATTTACGGCTaGGAAACACTGACCTTTAGCTTTGAAGACCTCAGG | + |
|
Preference number: 3 (lower is better) Translates to: LRRPGLEVCIYG*ETLTFSFEDLR Trigger: CCTGAGGTCTTCAAAGCTAAAGGTCAGTGTTTCCCAGCCGTAAATGCATACCTCTAGACCTGGCCTTCTCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000486911.2 |
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| 3UTR-3UTR CAA 90 bp | AGTTGCCCAGATGATTTTAATGTGCAGCCAAGGCTAAGAGCTACTTATCTAGACCCAAATATGGCTGGCTaGTCTCCAACAGTTGTGGCC | + |
|
Preference number: 3 (lower is better) Translates to: SCPDDFNVQPRLRATYLDPNMAG*SPTVVA Trigger: GGCCACAACTGTTGGAGACAAGCCAGCCATATTTGG...GTCTAGATAAGTAGCTCTTAGCCTTGGCTGCACATTAAAATCATCTGGGCAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000486911.2 |
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| 3UTR CCA 72 bp | TACAGTTTTGTAAATGATGCAGTATGTGCCCAGGCGTaGCAGCAGATAGACTTTCAGGCTTCAGGAGTCCAA | + |
|
Preference number: 3 (lower is better) Translates to: YSFVNDAVCAQA*QQIDFQASGVQ Trigger: TTGGACTCCTGAAGCCTGAAAGTCTATCTGCTGCCACGCCTGGGCACATACTGCATCATTTACAAAACTGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000486911.2 |
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| 3UTR GCA 72 bp | TTGTCAAATAATCAGAATCGCGTTTCAAACACAGATTaGTGGGCCCCGCCCACAGAGTATGTTTCAGTAGGT | + |
|
Preference number: 3 (lower is better) Translates to: LSNNQNRVSNTD*WAPPTEYVSVG Trigger: ACCTACTGAAACATACTCTGTGGGCGGGGCCCAGCAATCTGTGTTTGAAACGCGATTCTGATTATTTGACAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000486911.2 |
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| 3UTR CCA 72 bp | TCACACTTGCCCCTTACAATAAGATTTTCCCAAATATaGCTGGCTTGTCTCCAACAGTTGTGGCCCACATCT | + |
|
Preference number: 3 (lower is better) Translates to: SHLPLTIRFSQI*LACLQQLWPTS Trigger: AGATGTGGGCCACAACTGTTGGAGACAAGCCAGCCATATTTGGGAAAATCTTATTGTAAGGGGCAAGTGTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000486911.2 |
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| 3UTR CCA 72 bp | TCAAATAATCAGAATCGCGTTTCAAACACAGATTGCTaGGCCCCGCCCACAGAGTATGTTTCAGTAGGTCTA | + |
|
Preference number: 3 (lower is better) Translates to: SNNQNRVSNTDC*APPTEYVSVGL Trigger: TAGACCTACTGAAACATACTCTGTGGGCGGGGCCCAGCAATCTGTGTTTGAAACGCGATTCTGATTATTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000486911.2 |
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| 3UTR GCA 72 bp | TTGAATAAGGACATATGCAAAGACTTAAGGACTGTCTaGTATGGAATAAAAGGCAGCCAGTCTAGTGGTGGA | + |
|
Preference number: 3 (lower is better) Translates to: LNKDICKDLRTV*YGIKGSQSSGG Trigger: TCCACCACTAGACTGGCTGCCTTTTATTCCATAGCAGACAGTCCTTAAGTCTTTGCATATGTCCTTATTCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000486911.2 |
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| 3UTR-3UTR CAA 90 bp | TTGATGCTGCTAGTCCAGAAACCACATGATAAGAACCACCGATCTAGACTAAGTAAATCTCACTCACACTaGCCCCTTACAATAAGATTT | + |
|
Preference number: 3 (lower is better) Translates to: LMLLVQKPHDKNHRSRLSKSHSH*PLTIRF Trigger: AAATCTTATTGTAAGGGGCAAGTGTGAGTGAGATTT...ACTTAGTCTAGATCGGTGGTTCTTATCATGTGGTTTCTGGACTAGCAGCATCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000486911.2 |
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| 3UTR GCA 72 bp | AATACTCATCATATCCTAGCAATAAAGACCTTCTCGTaGTTAACCACAATACTGTTACCACACCTGCAGTTC | + |
|
Preference number: 3 (lower is better) Translates to: NTHHILAIKTFS*LTTILLPHLQF Trigger: GAACTGCAGGTGTGGTAACAGTATTGTGGTTAAGCACGAGAAGGTCTTTATTGCTAGGATATGATGAGTATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000473252.5 |
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| 3UTR TCA 72 bp | ATTTTCCTCCTCCTCATCCATATCCAAAGACGGTTCTaGAAATGCCTTTTCTTCTCTATTATAGCAACACCT | + |
|
Preference number: 3 (lower is better) Translates to: IFLLLIHIQRRF*KCLFFSIIATP Trigger: AGGTGTTGCTATAATAGAGAAGAAAAGGCATTTTCAGAACCGTCTTTGGATATGGATGAGGAGGAGGAAAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000486911.2 |
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| 3UTR GCA 72 bp | AGAGAAGAGAGAAAGGAAACTGCATCAACCAGAGATTaGAGGTGCAGAGCATTCTCATGTAAGATATTTAAA | + |
|
Preference number: 3 (lower is better) Translates to: REERKETASTRD*RCRAFSCKIFK Trigger: TTTAAATATCTTACATGAGAATGCTCTGCACCTGCAATCTCTGGTTGATGCAGTTTCCTTTCTCTCTTCTCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000486911.2 |
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| 3UTR-3UTR CAA 90 bp | TTCCATAAACGTATTTGCAAAAACGTAAACATCCTGAGAAAGCGGAAGCAGAACACAAGATTTACTGTGTaGGTGTATTTTCCCATGACT | + |
|
Preference number: 3 (lower is better) Translates to: FHKRICKNVNILRKRKQNTRFTV*VYFPMT Trigger: AGTCATGGGAAAATACACCAACACAGTAAATCTTGT...GTTCTGCTTCCGCTTTCTCAGGATGTTTACGTTTTTGCAAATACGTTTATGGAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000486911.2 |
||
| 3UTR GCA 72 bp | AAACAAAGAGGGTCTAGAATATACCAAAACGATCTCTaGAACTACAGTGGTTACATCAACAGTTTCTTAGGA | + |
|
Preference number: 3 (lower is better) Translates to: KQRGSRIYQNDL*NYSGYINSFLG Trigger: TCCTAAGAAACTGTTGATGTAACCACTGTAGTTGCAGAGATCGTTTTGGTATATTCTAGACCCTCTTTGTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000486911.2 |
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| CDS-3UTR CCA 90 bp | ACGAACTCAGCTCACTTCAATCTCCGCCTCCAGGGTTCAAGCAATCCTCCTGCCTTTCCGCCCCGGCTCTaGGTCAGCCCACGTGACTCT | + |
|
Preference number: 4 (lower is better) Translates to: TNSAHFNLRLQGSSNPPAFPPRL*VSPRDS Trigger: AGAGTCACGTGGGCTGACCCAGAGCCGGGGCGGAAA...GGCAGGAGGATTGCTTGAACCCTGGAGGCGGAGATTGAAGTGAGCTGAGTTCGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000479413.1 |
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| CDS-3UTR CCA 90 bp | CTACCCTGGCAGCTTGGACCTTTGCCTGCTGAGCCATTTTGGCCTGCCTTAGTGCCTGCCTGGCCCATGTaGTGGCAAGTCACCCAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: LPWQLGPLPAEPFWPALVPAWPM*WQVTQS Trigger: TGACTGGGTGACTTGCCACCACATGGGCCAGGCAGG...CACTAAGGCAGGCCAAAATGGCTCAGCAGGCAAAGGTCCAAGCTGCCAGGGTAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000486911.2 |
||
| CDS-3UTR GCA 90 bp | GCCCACATCTGCCAGTTAGACAGCCCTGTGCCTGAGTCTGTAGCGCAACAGCTGGTTGTGGCCCACATCTaGCAGTTAGACAGCCCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: AHICQLDSPVPESVAQQLVVAHI*QLDSPV Trigger: CACAGGGCTGTCTAACTGGCAGATGTGGGCCACAAC...CAGCTGTTGCGCTACAGACTCAGGCACAGGGCTGTCTAACTGGCAGATGTGGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000486911.2 |
||
| CDS-3UTR TCA 90 bp | GCACGAACTCAGCTCACTTCAATCTCCGCCTCCAGGGTTCAAGCAATCCTCCTGCTGGTCTCGAACTCCTaGCCTCAGGTGATCCACCCT | + |
|
Preference number: 4 (lower is better) Translates to: ARTQLTSISASRVQAILLLVSNS*PQVIHP Trigger: AGGGTGGATCACCTGAGGTCAGGAGTTCGAGACCAG...CAGGAGGATTGCTTGAACCCTGGAGGCGGAGATTGAAGTGAGCTGAGTTCGTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000334731.7 ENST00000479413.1 |
||
| CDS-3UTR TCA 90 bp | ACGAACTCAGCTCACTTCAATCTCCGCCTCCAGGGTTCAAGCAATCCTCCTGCCCTGGGTCAGCCCACGTaGCTCTTCTGGGAGGTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: TNSAHFNLRLQGSSNPPALGQPT*LFWEVK Trigger: TTTGACCTCCCAGAAGAGTCACGTGGGCTGACCCAG...GGCAGGAGGATTGCTTGAACCCTGGAGGCGGAGATTGAAGTGAGCTGAGTTCGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000479413.1 |
||
| CDS-3UTR CCA 90 bp | TGGCTTGAGAAGGCCAGGTCTAGAGGTATGCATTTACGGCTGGGAAACACTGACCTGCCGCAACCTGCCTaGCCCATGTGGTGGCAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: WLEKARSRGMHLRLGNTDLPQPA*PMWWQV Trigger: GACTTGCCACCACATGGGCCAGGCAGGTTGCGGCAG...GTCAGTGTTTCCCAGCCGTAAATGCATACCTCTAGACCTGGCCTTCTCAAGCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000486911.2 |
||
| CDS-3UTR CCA 90 bp | TGCTGGGCCCCGCCCACAGAGTATGTTTCAGTAGGTCTAGGGCAGAGCCCAAGACACAAGGTCAGTAGATaGAGACCATCCTGGCCAACA | + |
|
Preference number: 4 (lower is better) Translates to: CWAPPTEYVSVGLGQSPRHKVSR*RPSWPT Trigger: TGTTGGCCAGGATGGTCTCCATCTACTGACCTTGTG...TCTTGGGCTCTGCCCTAGACCTACTGAAACATACTCTGTGGGCGGGGCCCAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000486911.2 |
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| CDS-3UTR TCA 90 bp | TGTAATGGCACGAACTCAGCTCACTTCAATCTCCGCCTCCAGGGTTCAAGCAATACTCCTGACCTCAGGTaGTCCACCCTCCTTGGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: CNGTNSAHFNLRLQGSSNTPDLR*STLLGL Trigger: GAGGCCAAGGAGGGTGGATCACCTGAGGTCAGGAGT...ATTGCTTGAACCCTGGAGGCGGAGATTGAAGTGAGCTGAGTTCGTGCCATTACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000334731.7 ENST00000479413.1 |
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| CDS-3UTR TCA 90 bp | ATTAATTTTCTGCAGTTCAACTCCTGCTGTGTGGCCCAGTTCCTGACAGGCCATGTGTGGCCCAGTTCCTaGCAGGCCATGGACCGATGC | + |
|
Preference number: 4 (lower is better) Translates to: INFLQFNSCCVAQFLTGHVWPSS*QAMDRC Trigger: GCATCGGTCCATGGCCTGTCAGGAACTGGGCCACAC...ATGGCCTGTCAGGAACTGGGCCACACAGCAGGAGTTGAACTGCAGAAAATTAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377027.1 |
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| CDS-3UTR TCA 90 bp | ACCTTCTCGTGCTTAACCACAATACTGTTACCACACCTGCAGTTCAACTCCTGCGTGTGGCCCAGTTCCTaGCAGGCCATGGACCGATGC | + |
|
Preference number: 4 (lower is better) Translates to: TFSCLTTILLPHLQFNSCVWPSS*QAMDRC Trigger: GCATCGGTCCATGGCCTGTCAGGAACTGGGCCACAC...GCAGGAGTTGAACTGCAGGTGTGGTAACAGTATTGTGGTTAAGCACGAGAAGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000473252.5 |
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| CDS-3UTR CCA 90 bp | CTACCCTGGCAGCTTGGACCTTTGCCTGCTGAGCCATTTTGGCCTGCCTTAGTGAATGACACACTACCCTaGCAGCTTGGACCTTTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LPWQLGPLPAEPFWPALVNDTLP*QLGPLP Trigger: AGGCAAAGGTCCAAGCTGCCAGGGTAGTGTGTCATT...CACTAAGGCAGGCCAAAATGGCTCAGCAGGCAAAGGTCCAAGCTGCCAGGGTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000486911.2 |
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| 3UTR CAA 72 bp | TGCTGTAATGACACACTACCCTGGCAGCTTGGACCTTaGCCTGCTGAGCCATTTTGGCCTGCCTTAGTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: CCNDTLPWQLGP*PAEPFWPALVA Trigger: AGCCACTAAGGCAGGCCAAAATGGCTCAGCAGGCAAAGGTCCAAGCTGCCAGGGTAGTGTGTCATTACAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000486911.2 |
||
| CDS-3UTR TCA 90 bp | TGGCTTGAGAAGGCCAGGTCTAGAGGTATGCATTTACGGCTGGGAAACACTGACGCCTTAGTGGCTCCCTaGACTGTATCAGGGTGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: WLEKARSRGMHLRLGNTDALVAP*TVSGCH Trigger: GTGACACCCTGATACAGTTCAGGGAGCCACTAAGGC...GTCAGTGTTTCCCAGCCGTAAATGCATACCTCTAGACCTGGCCTTCTCAAGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000486911.2 |
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| CDS-3UTR GCA 90 bp | AACGTAAACATCCTGAGAAAGCGGAAGCAGAACACATACACGAGGACCAGTACTAGAGCTGCCGCAACCTaGCTGGCCCATGTGGTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: NVNILRKRKQNTYTRTSTRAAAT*LAHVVA Trigger: TGCCACCACATGGGCCAGGCAGGTTGCGGCAGCTCT...AGTACTGGTCCTCGTGTATGTGTTCTGCTTCCGCTTTCTCAGGATGTTTACGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000486911.2 |
||
| CDS-3UTR TCA 90 bp | TGGCTTGAGAAGGCCAGGTCTAGAGGTATGCATTTACGGCTGGGAAACACTGACTTCCTTTCGGCACCCTaGATGTTAACCCCTGCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: WLEKARSRGMHLRLGNTDFLSAP*MLTPAQ Trigger: CTGAGCAGGGGTTAACATTCAGGGTGCCGAAAGGAA...GTCAGTGTTTCCCAGCCGTAAATGCATACCTCTAGACCTGGCCTTCTCAAGCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000486911.2 |
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| CDS-3UTR GCA 90 bp | GCCCACATCTGCCAGTTAGACAGCCCTGTGCCTGAGTCTGTAGCGCAACAGCTGACAGTTGAAGCAATTTaGTGGAGTCATGGAGTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: AHICQLDSPVPESVAQQLTVEAI*WSHGVR Trigger: TCTGACTCCATGACTCCAGCAAATTGCTTCAACTGT...CAGCTGTTGCGCTACAGACTCAGGCACAGGGCTGTCTAACTGGCAGATGTGGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000486911.2 |
||
| CDS-3UTR TCA 90 bp | GGACAAGAGAGATGGGAAACAGGCTGTGGAATTCCTTTCGGCACCCTGAATGTTAGGCAGAGGTTGCATTaGGCTGAAATGGTGCCACTG | + |
|
Preference number: 4 (lower is better) Translates to: GQERWETGCGIPFGTLNVRQRLH*AEMVPL Trigger: CAGTGGCACCATTTCAGCTCAATGCAACCTCTGCCT...AACATTCAGGGTGCCGAAAGGAATTCCACAGCCTGTTTCCCATCTCTCTTGTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000486911.2 |
||
| CDS-3UTR TCA 90 bp | CAGTCAGGAGACACCCTGGCCAGTAGTTTATCTCTTTCTTCCACATCTCTCCTATGGACCTTTGCCTGCTaGGCCATTTTGGCCTGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: QSGDTLASSLSLSSTSLLWTFAC*AILACL Trigger: AAGGCAGGCCAAAATGGCTCAGCAGGCAAAGGTCCA...TAGGAGAGATGTGGAAGAAAGAGATAAACTACTGGCCAGGGTGTCTCCTGACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000486911.2 |
||
| CDS-3UTR GCA 90 bp | AGTTGCCCAGATGATTTTAATGTGCAGCCAAGGCTAAGAGCTACTTATCTAGACTCCCAAAGGCAGAGCTaGCGCAACCTGCCTGGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: SCPDDFNVQPRLRATYLDSQRQS*RNLPGP Trigger: TGGGCCAGGCAGGTTGCGGCAGCTCTGCCTTTGGGA...GTCTAGATAAGTAGCTCTTAGCCTTGGCTGCACATTAAAATCATCTGGGCAACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000486911.2 |
||
| CDS-3UTR CCA 90 bp | ACAATAAGATTTTCCCAAATATGGCTGGCTTGTCTCCAACAGTTGTGGCCCACAGCCTGGCCCATGTGGTaGCAAGTCACCCAGTCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: TIRFSQIWLACLQQLWPTAWPMW*QVTQSG Trigger: TCCTGACTGGGTGACTTGCCACCACATGGGCCAGGC...TGTGGGCCACAACTGTTGGAGACAAGCCAGCCATATTTGGGAAAATCTTATTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000486911.2 |
||
| CDS-3UTR TCA 90 bp | CTACCCTGGCAGCTTGGACCTTTGCCTGCTGAGCCATTTTGGCCTGCCTTAGTGTGGCTAATAAACACATaGAAAGATGTTCAGTCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LPWQLGPLPAEPFWPALVWLINT*KDVQSA Trigger: AGCCGACTGAACATCTTTTCATGTGTTTATTAGCCA...CACTAAGGCAGGCCAAAATGGCTCAGCAGGCAAAGGTCCAAGCTGCCAGGGTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000486911.2 |
||
| CDS-3UTR CCA 90 bp | TTTTCTGCAGTTCAACTCCTGCTGTGTGGCCCAGTTCCTGACAGGCCATGGACCAAGTTCACAGGCACATaGCCTGCACATTATGTGATA | + |
|
Preference number: 4 (lower is better) Translates to: FSAVQLLLCGPVPDRPWTKFTGT*PAHYVI Trigger: TATCACATAATGTGCAGGCCATGTGCCTGTGAACTT...GGTCCATGGCCTGTCAGGAACTGGGCCACACAGCAGGAGTTGAACTGCAGAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377027.1 |
||
| CDS-3UTR CCA 90 bp | GCCCACATCTGCCAGTTAGACAGCCCTGTGCCTGAGTCTGTAGCGCAACAGCTGTCTAAAGTACACTTCTaGGAAGTGTGGACATTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: AHICQLDSPVPESVAQQLSKVHF*EVWTFS Trigger: TGAAAATGTCCACACTTCCCAGAAGTGTACTTTAGA...CAGCTGTTGCGCTACAGACTCAGGCACAGGGCTGTCTAACTGGCAGATGTGGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000486911.2 |
||
| CDS-3UTR CCA 90 bp | CTACCCTGGCAGCTTGGACCTTTGCCTGCTGAGCCATTTTGGCCTGCCTTAGTGAATTTGCTGGAGTCATaGAGTCAGATAGTGACAAAG | + |
|
Preference number: 4 (lower is better) Translates to: LPWQLGPLPAEPFWPALVNLLES*SQIVTK Trigger: CTTTGTCACTATCTGACTCCATGACTCCAGCAAATT...CACTAAGGCAGGCCAAAATGGCTCAGCAGGCAAAGGTCCAAGCTGCCAGGGTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000486911.2 |
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| 3UTR CAA 72 bp | AAAGCGGAAGCAGAACACATACACGAGGACCAGTACTaGATGAGGACAAGAGAGATGGGAAACAGGCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: KAEAEHIHEDQY*MRTREMGNRLW Trigger: CCACAGCCTGTTTCCCATCTCTCTTGTCCTCATCAAGTACTGGTCCTCGTGTATGTGTTCTGCTTCCGCTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000486911.2 |
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| CDS-3UTR GCA 90 bp | GGACAAGAGAGATGGGAAACAGGCTGTGGAATTCCTTTCGGCACCCTGAATGTTGCATCAACCAGAGATTaGAGGTGCAGAGCATTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: GQERWETGCGIPFGTLNVASTRD*RCRAFS Trigger: TGAGAATGCTCTGCACCTGCAATCTCTGGTTGATGC...AACATTCAGGGTGCCGAAAGGAATTCCACAGCCTGTTTCCCATCTCTCTTGTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000486911.2 |
||
| CDS-3UTR CCA 90 bp | CAGTCAGGAGACACCCTGGCCAGTAGTTTATCTCTTTCTTCCACATCTCTCCTAATGGGAAACAGGCTGTaGAATTCCTTTCGGCACCCT | + |
|
Preference number: 4 (lower is better) Translates to: QSGDTLASSLSLSSTSLLMGNRL*NSFRHP Trigger: AGGGTGCCGAAAGGAATTCCACAGCCTGTTTCCCAT...TAGGAGAGATGTGGAAGAAAGAGATAAACTACTGGCCAGGGTGTCTCCTGACTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000486911.2 |
||
| 3UTR CAA 72 bp | CTGAACTGTATCAGGGTGTCACATGGCAGGAGAGCTTaGCCCGTGGAGCTGGGGAATCTGTATTTTAAATAC | + |
|
Preference number: 4 (lower is better) Translates to: LNCIRVSHGRRA*PVELGNLYFKY Trigger: GTATTTAAAATACAGATTCCCCAGCTCCACGGGCAAAGCTCTCCTGCCATGTGACACCCTGATACAGTTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000486911.2 |
||
| CDS-3UTR GCA 90 bp | AGTTGCCCAGATGATTTTAATGTGCAGCCAAGGCTAAGAGCTACTTATCTAGACCTGAAATGGTGCCACTaGACTCCAGCCCGGGCTATA | + |
|
Preference number: 4 (lower is better) Translates to: SCPDDFNVQPRLRATYLDLKWCH*TPARAI Trigger: TATAGCCCGGGCTGGAGTGCAGTGGCACCATTTCAG...GTCTAGATAAGTAGCTCTTAGCCTTGGCTGCACATTAAAATCATCTGGGCAACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000486911.2 |
||
| CDS-3UTR GCA 90 bp | AACGTAAACATCCTGAGAAAGCGGAAGCAGAACACATACACGAGGACCAGTACTCTAGGAGGCAGAGGTTaGATTGAGCTGAAATGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: NVNILRKRKQNTYTRTSTLGGRG*IELKWC Trigger: GCACCATTTCAGCTCAATGCAACCTCTGCCTCCTAG...AGTACTGGTCCTCGTGTATGTGTTCTGCTTCCGCTTTCTCAGGATGTTTACGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000486911.2 |
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| CDS-3UTR GCA 90 bp | TGGCTTGAGAAGGCCAGGTCTAGAGGTATGCATTTACGGCTGGGAAACACTGACGACTTAAGGACTGTCTaGTATGGAATAAAAGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: WLEKARSRGMHLRLGNTDDLRTV*YGIKGS Trigger: GCTGCCTTTTATTCCATAGCAGACAGTCCTTAAGTC...GTCAGTGTTTCCCAGCCGTAAATGCATACCTCTAGACCTGGCCTTCTCAAGCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000486911.2 |
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| CDS-3UTR CCA 90 bp | TTTTCTGCAGTTCAACTCCTGCTGTGTGGCCCAGTTCCTGACAGGCCATGGACCTTGCAGATAAAGACTTaGTCTGCACACTTTTATCGA | + |
|
Preference number: 4 (lower is better) Translates to: FSAVQLLLCGPVPDRPWTLQIKT*SAHFYR Trigger: TCGATAAAAGTGTGCAGACCAAGTCTTTATCTGCAA...GGTCCATGGCCTGTCAGGAACTGGGCCACACAGCAGGAGTTGAACTGCAGAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000377027.1 |
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| CDS-3UTR TCA 90 bp | TTCCCTTACCTCCCCTGTCACGTTGGACATACCCACAATAGACCCAATACAGAACTTTCACAAAGTCCCTaGTTGAATCACCTCCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: FPYLPCHVGHTHNRPNTELSQSP*LNHLLL Trigger: AAGGAGGAGGTGATTCAATCAGGGACTTTGTGAAAG...TTCTGTATTGGGTCTATTGTGGGTATGTCCAACGTGACAGGGGAGGTAAGGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000486911.2 |
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| CDS-3UTR TCA 90 bp | ACAATAAGATTTTCCCAAATATGGCTGGCTTGTCTCCAACAGTTGTGGCCCACATGCAGGCCAGACAGTTaGAGCAATTTGCTGGAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: TIRFSQIWLACLQQLWPTCRPDS*SNLLES Trigger: TGACTCCAGCAAATTGCTTCAACTGTCTGGCCTGCA...TGTGGGCCACAACTGTTGGAGACAAGCCAGCCATATTTGGGAAAATCTTATTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000486911.2 |
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| CDS-3UTR GCA 90 bp | GCATTTCTAACAAGTTTCCCAGGTAATATTGATGCTGCTAGTCCAGAAACCACAGGCAGCTTGGACCTTTaGCTGCTGAGCCATTTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: AFLTSFPGNIDAASPETTGSLDL*LLSHFG Trigger: GCCAAAATGGCTCAGCAGGCAAAGGTCCAAGCTGCC...TGTGGTTTCTGGACTAGCAGCATCAATATTACCTGGGAAACTTGTTAGAAATGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000486911.2 |
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| CDS-3UTR GCA 90 bp | TGCAAAAACGTAAACATCCTGAGAAAGCGGAAGCAGAACACATACACGAGGACCCCAGGTCTAGAGGTATaGATTTACGGCTGGGAAACA | + |
|
Preference number: 4 (lower is better) Translates to: CKNVNILRKRKQNTYTRTPGLEV*IYGWET Trigger: TGTTTCCCAGCCGTAAATGCATACCTCTAGACCTGG...GGTCCTCGTGTATGTGTTCTGCTTCCGCTTTCTCAGGATGTTTACGTTTTTGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000486911.2 |
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| CDS-3UTR CCA 90 bp | TGTAATGGCACGAACTCAGCTCACTTCAATCTCCGCCTCCAGGGTTCAAGCAATAAGTTCACAGGCACATaGCCTGCACATTATGTGATA | + |
|
Preference number: 4 (lower is better) Translates to: CNGTNSAHFNLRLQGSSNKFTGT*PAHYVI Trigger: TATCACATAATGTGCAGGCCATGTGCCTGTGAACTT...ATTGCTTGAACCCTGGAGGCGGAGATTGAAGTGAGCTGAGTTCGTGCCATTACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000334731.7 ENST00000479413.1 |
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| CDS-3UTR CCA 90 bp | GAAAAGATGCTCAGTCAACATCATGAGTCATTAGAAATATACAAATTAGGCCAGTTTCCGCCCCGGCTCTaGGTCAGCCCACGTGACTCT | + |
|
Preference number: 4 (lower is better) Translates to: EKMLSQHHESLEIYKLGQFPPRL*VSPRDS Trigger: AGAGTCACGTGGGCTGACCCAGAGCCGGGGCGGAAA...CTGGCCTAATTTGTATATTTCTAATGACTCATGATGTTGACTGAGCATCTTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000377031.7 |
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| 3UTR CAA 72 bp | GCCCCTTACAATAAGATTTTCCCAAATATGGCTGGCTaGTCTCCAACAGTTGTGGCCCACATCTGCCAGTTA | + |
|
Preference number: 4 (lower is better) Translates to: APYNKIFPNMAG*SPTVVAHICQL Trigger: TAACTGGCAGATGTGGGCCACAACTGTTGGAGACAAGCCAGCCATATTTGGGAAAATCTTATTGTAAGGGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000486911.2 |
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| CDS-3UTR TCA 90 bp | GAAAAGATGCTCAGTCAACATCATGAGTCATTAGAAATATACAAATTAGGCCAGAGGCGGAGGTTGTGGTaGGCCAAGATCCTGCCACTG | + |
|
Preference number: 4 (lower is better) Translates to: EKMLSQHHESLEIYKLGQRRRLW*AKILPL Trigger: CAGTGGCAGGATCTTGGCTCACCACAACCTCCGCCT...CTGGCCTAATTTGTATATTTCTAATGACTCATGATGTTGACTGAGCATCTTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377031.7 |
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| CDS-3UTR GCA 90 bp | TTCCCTTACCTCCCCTGTCACGTTGGACATACCCACAATAGACCCAATACAGAAAGAGAGAAAGGAAACTaGATCAACCAGAGATTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: FPYLPCHVGHTHNRPNTEREKGN*INQRLQ Trigger: CTGCAATCTCTGGTTGATGCAGTTTCCTTTCTCTCT...TTCTGTATTGGGTCTATTGTGGGTATGTCCAACGTGACAGGGGAGGTAAGGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000486911.2 |
||
| CDS-3UTR CCA 90 bp | CAGTCAGGAGACACCCTGGCCAGTAGTTTATCTCTTTCTTCCACATCTCTCCTACTTTGCCCGTGGAGCTaGGGAATCTGTATTTTAAAT | + |
|
Preference number: 4 (lower is better) Translates to: QSGDTLASSLSLSSTSLLLCPWS*GICILN Trigger: ATTTAAAATACAGATTCCCCAGCTCCACGGGCAAAG...TAGGAGAGATGTGGAAGAAAGAGATAAACTACTGGCCAGGGTGTCTCCTGACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000486911.2 |
||
| 3UTR CAA 72 bp | TGCCTTTTCTTCTCTATTATAGCAACACCTAGTGGCTaGAGAAGGCCAGGTCTAGAGGTATGCATTTACGGC | + |
|
Preference number: 4 (lower is better) Translates to: CLFFSIIATPSG*RRPGLEVCIYG Trigger: GCCGTAAATGCATACCTCTAGACCTGGCCTTCTCAAGCCACTAGGTGTTGCTATAATAGAGAAGAAAAGGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000486911.2 |
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| CDS-3UTR TCA 90 bp | GAAAAGATGCTCAGTCAACATCATGAGTCATTAGAAATATACAAATTAGGCCAGCTGGGTCAGCCCACGTaGCTCTTCTGGGAGGTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: EKMLSQHHESLEIYKLGQLGQPT*LFWEVK Trigger: TTTGACCTCCCAGAAGAGTCACGTGGGCTGACCCAG...CTGGCCTAATTTGTATATTTCTAATGACTCATGATGTTGACTGAGCATCTTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377031.7 |
||
| CDS-3UTR TCA 90 bp | TTCCCTTACCTCCCCTGTCACGTTGGACATACCCACAATAGACCCAATACAGAAACAATGGTCCCCATCTaGAACCATTTAAGTCAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: FPYLPCHVGHTHNRPNTETMVPI*NHLSQN Trigger: ATTCTGACTTAAATGGTTTCAGATGGGGACCATTGT...TTCTGTATTGGGTCTATTGTGGGTATGTCCAACGTGACAGGGGAGGTAAGGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000486911.2 |
||
| CDS-3UTR GCA 90 bp | TGCTTAACCACAATACTGTTACCACACCTGCAGTTCAACTCCTGCTGTGTGGCCGATAAAGACTTGGTCTaGACACTTTTATCGAACTTG | + |
|
Preference number: 4 (lower is better) Translates to: CLTTILLPHLQFNSCCVADKDLV*TLLSNL Trigger: CAAGTTCGATAAAAGTGTGCAGACCAAGTCTTTATC...GGCCACACAGCAGGAGTTGAACTGCAGGTGTGGTAACAGTATTGTGGTTAAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000473252.5 |
||
| CDS-3UTR GCA 90 bp | TTCCCTTACCTCCCCTGTCACGTTGGACATACCCACAATAGACCCAATACAGAATACCAAAACGATCTCTaGAACTACAGTGGTTACATC | + |
|
Preference number: 4 (lower is better) Translates to: FPYLPCHVGHTHNRPNTEYQNDL*NYSGYI Trigger: GATGTAACCACTGTAGTTGCAGAGATCGTTTTGGTA...TTCTGTATTGGGTCTATTGTGGGTATGTCCAACGTGACAGGGGAGGTAAGGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000486911.2 |
||
| CDS-3UTR GCA 90 bp | TTGATGCTGCTAGTCCAGAAACCACATGATAAGAACCACCGATCTAGACTAAGTCTGAATGTTAACCCCTaGTCAGGAAAGGGTGCATCT | + |
|
Preference number: 4 (lower is better) Translates to: LMLLVQKPHDKNHRSRLSLNVNP*SGKGAS Trigger: AGATGCACCCTTTCCTGAGCAGGGGTTAACATTCAG...ACTTAGTCTAGATCGGTGGTTCTTATCATGTGGTTTCTGGACTAGCAGCATCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000486911.2 |
||
| CDS-3UTR GCA 90 bp | TTCCCTTACCTCCCCTGTCACGTTGGACATACCCACAATAGACCCAATACAGAACAGAGCCCAAGAATTTaGATTTCTAACAAGTTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: FPYLPCHVGHTHNRPNTEQSPRI*ISNKFP Trigger: GGGAAACTTGTTAGAAATGCAAATTCTTGGGCTCTG...TTCTGTATTGGGTCTATTGTGGGTATGTCCAACGTGACAGGGGAGGTAAGGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000486911.2 |
||
| CDS-3UTR CCA 90 bp | CAATTTGCTGGAGTCATGGAGTCAGATAGTGACAAAGTTGTAACTAGAACAAAGGGAGAGCTTTGCCCGTaGAGCTGGGGAATCTGTATT | + |
|
Preference number: 4 (lower is better) Translates to: QFAGVMESDSDKVVTRTKGELCP*SWGICI Trigger: AATACAGATTCCCCAGCTCCACGGGCAAAGCTCTCC...CTTTGTTCTAGTTACAACTTTGTCACTATCTGACTCCATGACTCCAGCAAATTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000486911.2 |
||
| CDS-3UTR TCA 90 bp | GAAAAGATGCTCAGTCAACATCATGAGTCATTAGAAATATACAAATTAGGCCAGAGCACTTTGGGAGGTTaGGGCAGGCAGATCATGAGG | + |
|
Preference number: 4 (lower is better) Translates to: EKMLSQHHESLEIYKLGQSTLGG*GRQIMR Trigger: CCTCATGATCTGCCTGCCTCAACCTCCCAAAGTGCT...CTGGCCTAATTTGTATATTTCTAATGACTCATGATGTTGACTGAGCATCTTTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377031.7 |
||
| CDS-3UTR TCA 90 bp | CAATTTGCTGGAGTCATGGAGTCAGATAGTGACAAAGTTGTAACTAGAACAAAGCACAAAGTCCCTGATTaGATCACCTCCTCCTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: QFAGVMESDSDKVVTRTKHKVPD*ITSSFQ Trigger: CTGGAAGGAGGAGGTGATTCAATCAGGGACTTTGTG...CTTTGTTCTAGTTACAACTTTGTCACTATCTGACTCCATGACTCCAGCAAATTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000486911.2 |
||
| CDS-3UTR GCA 90 bp | ATTAATTTTCTGCAGTTCAACTCCTGCTGTGTGGCCCAGTTCCTGACAGGCCATGATAAAGACTTGGTCTaGACACTTTTATCGAACTTG | + |
|
Preference number: 4 (lower is better) Translates to: INFLQFNSCCVAQFLTGHDKDLV*TLLSNL Trigger: CAAGTTCGATAAAAGTGTGCAGACCAAGTCTTTATC...ATGGCCTGTCAGGAACTGGGCCACACAGCAGGAGTTGAACTGCAGAAAATTAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000377027.1 |
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| CDS-3UTR GCA 90 bp | ATTAATTTTCTGCAGTTCAACTCCTGCTGTGTGGCCCAGTTCCTGACAGGCCATTTTGCATTAATTTTCTaGAGTTCAACTCCTGCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: INFLQFNSCCVAQFLTGHFALIF*SSTPAV Trigger: CACAGCAGGAGTTGAACTGCAGAAAATTAATGCAAA...ATGGCCTGTCAGGAACTGGGCCACACAGCAGGAGTTGAACTGCAGAAAATTAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000377027.1 |
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| CDS-3UTR GCA 90 bp | GAAAAGATGCTCAGTCAACATCATGAGTCATTAGAAATATACAAATTAGGCCAGCTGAAATGGTGCCACTaGACTCCAGCCCGGGCTATA | + |
|
Preference number: 4 (lower is better) Translates to: EKMLSQHHESLEIYKLGQLKWCH*TPARAI Trigger: TATAGCCCGGGCTGGAGTGCAGTGGCACCATTTCAG...CTGGCCTAATTTGTATATTTCTAATGACTCATGATGTTGACTGAGCATCTTTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377031.7 |
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| CDS-3UTR GCA 90 bp | TTCCATAAACGTATTTGCAAAAACGTAAACATCCTGAGAAAGCGGAAGCAGAACCTGCTCAGGAAAGGGTaGATCTGTCTTCATCATGCC | + |
|
Preference number: 4 (lower is better) Translates to: FHKRICKNVNILRKRKQNLLRKG*ICLHHA Trigger: GGCATGATGAAGACAGATGCACCCTTTCCTGAGCAG...GTTCTGCTTCCGCTTTCTCAGGATGTTTACGTTTTTGCAAATACGTTTATGGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000486911.2 |
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| CDS-3UTR CCA 90 bp | ACTCTTTTCCATAAACGTATTTGCAAAAACGTAAACATCCTGAGAAAGCGGAAGGTATGTGCCCAGGCGTaGCAGCAGATAGACTTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: TLFHKRICKNVNILRKRKVCAQA*QQIDFQ Trigger: CTGAAAGTCTATCTGCTGCCACGCCTGGGCACATAC...CTTCCGCTTTCTCAGGATGTTTACGTTTTTGCAAATACGTTTATGGAAAAGAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000486911.2 |
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| CDS-3UTR CCA 90 bp | AGTTGCCCAGATGATTTTAATGTGCAGCCAAGGCTAAGAGCTACTTATCTAGACAAGGACTGTCTGCTATaGAATAAAAGGCAGCCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: SCPDDFNVQPRLRATYLDKDCLL*NKRQPV Trigger: GACTGGCTGCCTTTTATTCCATAGCAGACAGTCCTT...GTCTAGATAAGTAGCTCTTAGCCTTGGCTGCACATTAAAATCATCTGGGCAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000486911.2 |
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| CDS-3UTR CCA 90 bp | ACTCTTTTCCATAAACGTATTTGCAAAAACGTAAACATCCTGAGAAAGCGGAAGTATCAGGGTGTCACATaGCAGGAGAGCTTTGCCCGT | + |
|
Preference number: 4 (lower is better) Translates to: TLFHKRICKNVNILRKRKYQGVT*QESFAR Trigger: ACGGGCAAAGCTCTCCTGCCATGTGACACCCTGATA...CTTCCGCTTTCTCAGGATGTTTACGTTTTTGCAAATACGTTTATGGAAAAGAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000486911.2 |
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| CDS-3UTR TCA 90 bp | GAAAAGATGCTCAGTCAACATCATGAGTCATTAGAAATATACAAATTAGGCCAGAGGCAGAGGTTGCATTaGGCTGAAATGGTGCCACTG | + |
|
Preference number: 4 (lower is better) Translates to: EKMLSQHHESLEIYKLGQRQRLH*AEMVPL Trigger: CAGTGGCACCATTTCAGCTCAATGCAACCTCTGCCT...CTGGCCTAATTTGTATATTTCTAATGACTCATGATGTTGACTGAGCATCTTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377031.7 |
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| CDS-3UTR TCA 90 bp | GCATTTCTAACAAGTTTCCCAGGTAATATTGATGCTGCTAGTCCAGAAACCACACTACAGTTTTGTAAATaGTGCAGTATGTGCCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: AFLTSFPGNIDAASPETTLQFCK*CSMCPG Trigger: GCCTGGGCACATACTGCATCATTTACAAAACTGTAG...TGTGGTTTCTGGACTAGCAGCATCAATATTACCTGGGAAACTTGTTAGAAATGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000486911.2 |
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| CDS-3UTR GCA 90 bp | GAAAAGATGCTCAGTCAACATCATGAGTCATTAGAAATATACAAATTAGGCCAGCTAGGAGGCAGAGGTTaGATTGAGCTGAAATGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: EKMLSQHHESLEIYKLGQLGGRG*IELKWC Trigger: GCACCATTTCAGCTCAATGCAACCTCTGCCTCCTAG...CTGGCCTAATTTGTATATTTCTAATGACTCATGATGTTGACTGAGCATCTTTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377031.7 |
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| CDS-3UTR GCA 90 bp | TTCCATAAACGTATTTGCAAAAACGTAAACATCCTGAGAAAGCGGAAGCAGAACACCAGAGATTGCAGGTaGAGAGCATTCTCATGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: FHKRICKNVNILRKRKQNTRDCR*RAFSCK Trigger: CTTACATGAGAATGCTCTGCACCTGCAATCTCTGGT...GTTCTGCTTCCGCTTTCTCAGGATGTTTACGTTTTTGCAAATACGTTTATGGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000486911.2 |
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| CDS-3UTR CCA 90 bp | GAAAAGATGCTCAGTCAACATCATGAGTCATTAGAAATATACAAATTAGGCCAGCACAAGGTCAGTAGATaGAGACCATCCTGGCCAACA | + |
|
Preference number: 4 (lower is better) Translates to: EKMLSQHHESLEIYKLGQHKVSR*RPSWPT Trigger: TGTTGGCCAGGATGGTCTCCATCTACTGACCTTGTG...CTGGCCTAATTTGTATATTTCTAATGACTCATGATGTTGACTGAGCATCTTTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377031.7 |
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| CDS-3UTR CCA 90 bp | CAAAACAAAGAGGGTCTAGAATATACCAAAACGATCTCTGCAACTACAGTGGTTAGTCAGGAGACACCCTaGCCAGTAGTTTATCTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: QNKEGLEYTKTISATTVVSQETP*PVVYLF Trigger: AAAGAGATAAACTACTGGCCAGGGTGTCTCCTGACT...AACCACTGTAGTTGCAGAGATCGTTTTGGTATATTCTAGACCCTCTTTGTTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000486911.2 |
||
| CDS-3UTR CCA 90 bp | CAAAACAAAGAGGGTCTAGAATATACCAAAACGATCTCTGCAACTACAGTGGTTGTATGCATTTACGGCTaGGAAACACTGACCTTTAGC | + |
|
Preference number: 4 (lower is better) Translates to: QNKEGLEYTKTISATTVVVCIYG*ETLTFS Trigger: GCTAAAGGTCAGTGTTTCCCAGCCGTAAATGCATAC...AACCACTGTAGTTGCAGAGATCGTTTTGGTATATTCTAGACCCTCTTTGTTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000486911.2 |
||
| CDS-3UTR TCA 90 bp | CAAAACAAAGAGGGTCTAGAATATACCAAAACGATCTCTGCAACTACAGTGGTTAATGGGCAACACATCTaGATAGACATTTCACCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: QNKEGLEYTKTISATTVVNGQHI*IDISPV Trigger: CACTGGTGAAATGTCTATTCAGATGTGTTGCCCATT...AACCACTGTAGTTGCAGAGATCGTTTTGGTATATTCTAGACCCTCTTTGTTTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000486911.2 |
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| CDS-3UTR CCA 90 bp | CAAAACAAAGAGGGTCTAGAATATACCAAAACGATCTCTGCAACTACAGTGGTTTTTCCCAAATATGGCTaGCTTGTCTCCAACAGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: QNKEGLEYTKTISATTVVFPKYG*LVSNSC Trigger: ACAACTGTTGGAGACAAGCCAGCCATATTTGGGAAA...AACCACTGTAGTTGCAGAGATCGTTTTGGTATATTCTAGACCCTCTTTGTTTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000486911.2 |
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| CDS-3UTR CCA 90 bp | TTCCATAAACGTATTTGCAAAAACGTAAACATCCTGAGAAAGCGGAAGCAGAACAGATTTTCCCAAATATaGCTGGCTTGTCTCCAACAG | + |
|
Preference number: 4 (lower is better) Translates to: FHKRICKNVNILRKRKQNRFSQI*LACLQQ Trigger: CTGTTGGAGACAAGCCAGCCATATTTGGGAAAATCT...GTTCTGCTTCCGCTTTCTCAGGATGTTTACGTTTTTGCAAATACGTTTATGGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000486911.2 |
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| CDS-3UTR TCA 90 bp | CAAAACAAAGAGGGTCTAGAATATACCAAAACGATCTCTGCAACTACAGTGGTTACTGGCATCTCACTTTaGCTTAAAGATGATGAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: QNKEGLEYTKTISATTVVTGISL*LKDDES Trigger: GCTTTCATCATCTTTAAGTCAAAGTGAGATGCCAGT...AACCACTGTAGTTGCAGAGATCGTTTTGGTATATTCTAGACCCTCTTTGTTTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000486911.2 |
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| CDS-3UTR TCA 90 bp | ACTCTTTTCCATAAACGTATTTGCAAAAACGTAAACATCCTGAGAAAGCGGAAGTGGTGTATTTTCCCATaGCTCCTAAATCTCACTCAC | + |
|
Preference number: 4 (lower is better) Translates to: TLFHKRICKNVNILRKRKWCIFP*LLNLTH Trigger: GTGAGTGAGATTTAGGAGTCATGGGAAAATACACCA...CTTCCGCTTTCTCAGGATGTTTACGTTTTTGCAAATACGTTTATGGAAAAGAGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000486911.2 |
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| CDS-3UTR TCA 90 bp | AAAGAGGGTCTAGAATATACCAAAACGATCTCTGCAACTACAGTGGTTACATCAAAGCTTGGATACTGCTaGATGTTATGCCATTTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: KEGLEYTKTISATTVVTSKLGYC*MLCHLK Trigger: CTTCAAATGGCATAACATTCAGCAGTATCCAAGCTT...TGATGTAACCACTGTAGTTGCAGAGATCGTTTTGGTATATTCTAGACCCTCTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000486911.2 |
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| CDS-3UTR TCA 90 bp | CAATTTGCTGGAGTCATGGAGTCAGATAGTGACAAAGTTGTAACTAGAACAAAGATCCAAAGACGGTTCTaGAAATGCCTTTTCTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: QFAGVMESDSDKVVTRTKIQRRF*KCLFFS Trigger: AGAGAAGAAAAGGCATTTTCAGAACCGTCTTTGGAT...CTTTGTTCTAGTTACAACTTTGTCACTATCTGACTCCATGACTCCAGCAAATTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000486911.2 |
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| CDS-3UTR CCA 90 bp | TACTCATCATATCCTAGCAATAAAGACCTTCTCGTGCTTAACCACAATACTGTTAAGTTCACAGGCACATaGCCTGCACATTATGTGATA | + |
|
Preference number: 4 (lower is better) Translates to: YSSYPSNKDLLVLNHNTVKFTGT*PAHYVI Trigger: TATCACATAATGTGCAGGCCATGTGCCTGTGAACTT...AACAGTATTGTGGTTAAGCACGAGAAGGTCTTTATTGCTAGGATATGATGAGTA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000473252.5 |
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| CDS-3UTR CCA 90 bp | ACTCTTTTCCATAAACGTATTTGCAAAAACGTAAACATCCTGAGAAAGCGGAAGTTAAGTCAGAATCTTTaGAGGAAGAGGCCAGGATTG | + |
|
Preference number: 4 (lower is better) Translates to: TLFHKRICKNVNILRKRKLSQNL*RKRPGL Trigger: CAATCCTGGCCTCTTCCTCCAAAGATTCTGACTTAA...CTTCCGCTTTCTCAGGATGTTTACGTTTTTGCAAATACGTTTATGGAAAAGAGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000486911.2 |
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| CDS-3UTR CCA 90 bp | GAAAAGATGCTCAGTCAACATCATGAGTCATTAGAAATATACAAATTAGGCCAGAAGTTCACAGGCACATaGCCTGCACATTATGTGATA | + |
|
Preference number: 4 (lower is better) Translates to: EKMLSQHHESLEIYKLGQKFTGT*PAHYVI Trigger: TATCACATAATGTGCAGGCCATGTGCCTGTGAACTT...CTGGCCTAATTTGTATATTTCTAATGACTCATGATGTTGACTGAGCATCTTTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377031.7 |
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| 3UTR CAA 72 bp | CATTTAAGTCAGAATCTTTGGAGGAAGAGGCCAGGATaGGTAGGTTATAAAAGTTGCCCAGATGATTTTAAT | + |
|
Preference number: 4 (lower is better) Translates to: HLSQNLWRKRPG*VGYKSCPDDFN Trigger: ATTAAAATCATCTGGGCAACTTTTATAACCTACCAATCCTGGCCTCTTCCTCCAAAGATTCTGACTTAAATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000486911.2 |
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| CDS-3UTR CCA 90 bp | GAAAAGATGCTCAGTCAACATCATGAGTCATTAGAAATATACAAATTAGGCCAGCAGAGGGAGACTCCATaGAATAACAATGTCTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: EKMLSQHHESLEIYKLGQQRETP*NNNVFF Trigger: AAAGAAGACATTGTTATTCCATGGAGTCTCCCTCTG...CTGGCCTAATTTGTATATTTCTAATGACTCATGATGTTGACTGAGCATCTTTTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377031.7 |
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| CDS-3UTR CCA 90 bp | ACTCTTTTCCATAAACGTATTTGCAAAAACGTAAACATCCTGAGAAAGCGGAAGTCTCTGCAACTACAGTaGTTACATCAACAGTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: TLFHKRICKNVNILRKRKSLQLQ*LHQQFL Trigger: AAGAAACTGTTGATGTAACCACTGTAGTTGCAGAGA...CTTCCGCTTTCTCAGGATGTTTACGTTTTTGCAAATACGTTTATGGAAAAGAGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000486911.2 |
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| CDS-3UTR CCA 90 bp | AAAGGCCTCACAATTACTTTCCTCTCATCAGATATATCTAAGCTTGGATACTGCGATTTATTCTACCAATaGGAACAGAGAAGAGAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: KGLTITFLSSDISKLGYCDLFYQ*EQRREK Trigger: TTTCTCTCTTCTCTGTTCCCATTGGTAGAATAAATC...GCAGTATCCAAGCTTAGATATATCTGATGAGAGGAAAGTAATTGTGAGGCCTTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000486911.2 |
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| CDS TCA 90 bp | AGAAACAAACGCAGCCTTTCCGCCCCGGCTCTGGGTCAGCCCACGTaGCTCTTCTGGGAGGTCAAAGAGCATCGCTCTGCCCTCCCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: RNKRSLSAPALGQPT*LFWEVKEHRSALPA Trigger: AGCAGGGAGGGCAGAGCGATGCTCTTTGACCTCCCAGAAGAGTCACGTGGGCTGACCCAGAGCCGGGGCGGAAAGGCTGCGTTTGTTTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000479413.1 |
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| CDS CCA 90 bp | GTCAATGACCCGGAAGAAACAAACGCAGCCTTTCCGCCCCGGCTCTaGGTCAGCCCACGTGACTCTTCTGGGAGGTCAAAGAGCATCGCT | + |
|
Preference number: 5 (lower is better) Translates to: VNDPEETNAAFPPRL*VSPRDSSGRSKSIA Trigger: AGCGATGCTCTTTGACCTCCCAGAAGAGTCACGTGGGCTGACCCAGAGCCGGGGCGGAAAGGCTGCGTTTGTTTCTTCCGGGTCATTGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000377031.7 ENST00000479413.1 |
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| CDS-3UTR CAA 90 bp | TGGCTTGAGAAGGCCAGGTCTAGAGGTATGCATTTACGGCTGGGAAACACTGACCACTACCCTGGCAGCTaGGACCTTTGCCTGCTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: WLEKARSRGMHLRLGNTDHYPGS*DLCLLS Trigger: GCTCAGCAGGCAAAGGTCCAAGCTGCCAGGGTAGTG...GTCAGTGTTTCCCAGCCGTAAATGCATACCTCTAGACCTGGCCTTCTCAAGCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000486911.2 |
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| CDS-3UTR CAA 90 bp | GGACAAGAGAGATGGGAAACAGGCTGTGGAATTCCTTTCGGCACCCTGAATGTTGCAACACCTAGTGGCTaGAGAAGGCCAGGTCTAGAG | + |
|
Preference number: 5 (lower is better) Translates to: GQERWETGCGIPFGTLNVATPSG*RRPGLE Trigger: CTCTAGACCTGGCCTTCTCAAGCCACTAGGTGTTGC...AACATTCAGGGTGCCGAAAGGAATTCCACAGCCTGTTTCCCATCTCTCTTGTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000486911.2 |
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| CDS-3UTR CAA 90 bp | GGACAAGAGAGATGGGAAACAGGCTGTGGAATTCCTTTCGGCACCCTGAATGTTCTGCAGGCCAGACAGTaGAAGCAATTTGCTGGAGTC | + |
|
Preference number: 5 (lower is better) Translates to: GQERWETGCGIPFGTLNVLQARQ*KQFAGV Trigger: GACTCCAGCAAATTGCTTCAACTGTCTGGCCTGCAG...AACATTCAGGGTGCCGAAAGGAATTCCACAGCCTGTTTCCCATCTCTCTTGTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000486911.2 |
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| CDS-3UTR CAA 90 bp | TTCCCTTACCTCCCCTGTCACGTTGGACATACCCACAATAGACCCAATACAGAAGTGGACAAGAGCAACTaGAGGGGGAAGAAACCCCAA | + |
|
Preference number: 5 (lower is better) Translates to: FPYLPCHVGHTHNRPNTEVDKSN*RGKKPQ Trigger: TTGGGGTTTCTTCCCCCTCAAGTTGCTCTTGTCCAC...TTCTGTATTGGGTCTATTGTGGGTATGTCCAACGTGACAGGGGAGGTAAGGGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000486911.2 |
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| CDS-3UTR CAA 90 bp | TGCTGGGCCCCGCCCACAGAGTATGTTTCAGTAGGTCTAGGGCAGAGCCCAAGAAAATCTCACTCACACTaGCCCCTTACAATAAGATTT | + |
|
Preference number: 5 (lower is better) Translates to: CWAPPTEYVSVGLGQSPRKSHSH*PLTIRF Trigger: AAATCTTATTGTAAGGGGCAAGTGTGAGTGAGATTT...TCTTGGGCTCTGCCCTAGACCTACTGAAACATACTCTGTGGGCGGGGCCCAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000486911.2 |
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| CDS-3UTR CAA 90 bp | GCCCACATCTGCCAGTTAGACAGCCCTGTGCCTGAGTCTGTAGCGCAACAGCTGGTGGTTTGCAAACTTTaGTCAAATAATCAGAATCGC | + |
|
Preference number: 5 (lower is better) Translates to: AHICQLDSPVPESVAQQLVVCKL*SNNQNR Trigger: GCGATTCTGATTATTTGACAAAAGTTTGCAAACCAC...CAGCTGTTGCGCTACAGACTCAGGCACAGGGCTGTCTAACTGGCAGATGTGGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000486911.2 |
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| CDS-3UTR CAA 90 bp | TTTTCTGCAGTTCAACTCCTGCTGTGTGGCCCAGTTCCTGACAGGCCATGGACCTTTGCAGATAAAGACTaGGTCTGCACACTTTTATCG | + |
|
Preference number: 5 (lower is better) Translates to: FSAVQLLLCGPVPDRPWTFADKD*VCTLLS Trigger: CGATAAAAGTGTGCAGACCAAGTCTTTATCTGCAAA...GGTCCATGGCCTGTCAGGAACTGGGCCACACAGCAGGAGTTGAACTGCAGAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000377027.1 |
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| CDS-3UTR CAA 90 bp | TTACCACACCTGCAGTTCAACTCCTGCTGTGTGGCCCAGTTCCTGACAGGCCATTTTGCAGATAAAGACTaGGTCTGCACACTTTTATCG | + |
|
Preference number: 5 (lower is better) Translates to: LPHLQFNSCCVAQFLTGHFADKD*VCTLLS Trigger: CGATAAAAGTGTGCAGACCAAGTCTTTATCTGCAAA...ATGGCCTGTCAGGAACTGGGCCACACAGCAGGAGTTGAACTGCAGGTGTGGTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000473252.5 |
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| CDS-3UTR CAA 90 bp | TGTAATGGCACGAACTCAGCTCACTTCAATCTCCGCCTCCAGGGTTCAAGCAATAACTACTCCCAGGAATaGACGCTTCTGTCAATGACC | + |
|
Preference number: 5 (lower is better) Translates to: CNGTNSAHFNLRLQGSSNNYSQE*TLLSMT Trigger: GGTCATTGACAGAAGCGTCAATTCCTGGGAGTAGTT...ATTGCTTGAACCCTGGAGGCGGAGATTGAAGTGAGCTGAGTTCGTGCCATTACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000479413.1 |
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| CDS-3UTR CAA 90 bp | TGCAAAAACGTAAACATCCTGAGAAAGCGGAAGCAGAACACATACACGAGGACCCCAAATATGGCTGGCTaGTCTCCAACAGTTGTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: CKNVNILRKRKQNTYTRTPNMAG*SPTVVA Trigger: GGCCACAACTGTTGGAGACAAGCCAGCCATATTTGG...GGTCCTCGTGTATGTGTTCTGCTTCCGCTTTCTCAGGATGTTTACGTTTTTGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000486911.2 |
||
| CDS-3UTR CAA 90 bp | CAATTTGCTGGAGTCATGGAGTCAGATAGTGACAAAGTTGTAACTAGAACAAAGCATGGCAGGAGAGCTTaGCCCGTGGAGCTGGGGAAT | + |
|
Preference number: 5 (lower is better) Translates to: QFAGVMESDSDKVVTRTKHGRRA*PVELGN Trigger: ATTCCCCAGCTCCACGGGCAAAGCTCTCCTGCCATG...CTTTGTTCTAGTTACAACTTTGTCACTATCTGACTCCATGACTCCAGCAAATTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000486911.2 |
||
| CDS-3UTR CAA 90 bp | TTGATGCTGCTAGTCCAGAAACCACATGATAAGAACCACCGATCTAGACTAAGTGCTTGTCTCCAACAGTaGTGGCCCACATCTGCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: LMLLVQKPHDKNHRSRLSACLQQ*WPTSAS Trigger: ACTGGCAGATGTGGGCCACAACTGTTGGAGACAAGC...ACTTAGTCTAGATCGGTGGTTCTTATCATGTGGTTTCTGGACTAGCAGCATCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000486911.2 |
||
| CDS-3UTR CAA 90 bp | GGACAAGAGAGATGGGAAACAGGCTGTGGAATTCCTTTCGGCACCCTGAATGTTTTTAAGTCAGAATCTTaGGAGGAAGAGGCCAGGATT | + |
|
Preference number: 5 (lower is better) Translates to: GQERWETGCGIPFGTLNVFKSES*EEEARI Trigger: AATCCTGGCCTCTTCCTCCAAAGATTCTGACTTAAA...AACATTCAGGGTGCCGAAAGGAATTCCACAGCCTGTTTCCCATCTCTCTTGTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000486911.2 |
||
| CDS-3UTR CAA 90 bp | AAAGAGGGTCTAGAATATACCAAAACGATCTCTGCAACTACAGTGGTTACATCATGGCAGCTTGGACCTTaGCCTGCTGAGCCATTTTGG | + |
|
Preference number: 5 (lower is better) Translates to: KEGLEYTKTISATTVVTSWQLGP*PAEPFW Trigger: CCAAAATGGCTCAGCAGGCAAAGGTCCAAGCTGCCA...TGATGTAACCACTGTAGTTGCAGAGATCGTTTTGGTATATTCTAGACCCTCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000486911.2 |
||
| CDS-3UTR CAA 90 bp | AACGTAAACATCCTGAGAAAGCGGAAGCAGAACACATACACGAGGACCAGTACTAGGAAGAGGCCAGGATaGGTAGGTTATAAAAGTTGC | + |
|
Preference number: 5 (lower is better) Translates to: NVNILRKRKQNTYTRTSTRKRPG*VGYKSC Trigger: GCAACTTTTATAACCTACCAATCCTGGCCTCTTCCT...AGTACTGGTCCTCGTGTATGTGTTCTGCTTCCGCTTTCTCAGGATGTTTACGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000486911.2 |
||
| CDS-3UTR CAA 90 bp | CAAAACAAAGAGGGTCTAGAATATACCAAAACGATCTCTGCAACTACAGTGGTTACCTCCCCTGTCACGTaGGACATACCCACAATAGAC | + |
|
Preference number: 5 (lower is better) Translates to: QNKEGLEYTKTISATTVVTSPVT*DIPTID Trigger: GTCTATTGTGGGTATGTCCAACGTGACAGGGGAGGT...AACCACTGTAGTTGCAGAGATCGTTTTGGTATATTCTAGACCCTCTTTGTTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000486911.2 |
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| CDS-3UTR CAA 90 bp | GAAAAGATGCTCAGTCAACATCATGAGTCATTAGAAATATACAAATTAGGCCAGAGGCAGGAGAATCACTaGAACAAGGGAGGCGGAGGT | + |
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Preference number: 5 (lower is better) Translates to: EKMLSQHHESLEIYKLGQRQENH*NKGGGG Trigger: ACCTCCGCCTCCCTTGTTCAAGTGATTCTCCTGCCT...CTGGCCTAATTTGTATATTTCTAATGACTCATGATGTTGACTGAGCATCTTTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377031.7 |
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| CDS-3UTR CAA 90 bp | AAAGAGGGTCTAGAATATACCAAAACGATCTCTGCAACTACAGTGGTTACATCACACGAGGACCAGTACTaGATGAGGACAAGAGAGATG | + |
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Preference number: 5 (lower is better) Translates to: KEGLEYTKTISATTVVTSHEDQY*MRTREM Trigger: CATCTCTCTTGTCCTCATCAAGTACTGGTCCTCGTG...TGATGTAACCACTGTAGTTGCAGAGATCGTTTTGGTATATTCTAGACCCTCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000486911.2 |
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| CDS-3UTR CAA 90 bp | GAAAAGATGCTCAGTCAACATCATGAGTCATTAGAAATATACAAATTAGGCCAGAACTACTCCCAGGAATaGACGCTTCTGTCAATGACC | + |
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Preference number: 5 (lower is better) Translates to: EKMLSQHHESLEIYKLGQNYSQE*TLLSMT Trigger: GGTCATTGACAGAAGCGTCAATTCCTGGGAGTAGTT...CTGGCCTAATTTGTATATTTCTAATGACTCATGATGTTGACTGAGCATCTTTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377031.7 |
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| CDS-3UTR CAA 90 bp | AAAGGCCTCACAATTACTTTCCTCTCATCAGATATATCTAAGCTTGGATACTGCGTTTCCCAGGTAATATaGATGCTGCTAGTCCAGAAA | + |
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Preference number: 5 (lower is better) Translates to: KGLTITFLSSDISKLGYCVSQVI*MLLVQK Trigger: TTTCTGGACTAGCAGCATCAATATTACCTGGGAAAC...GCAGTATCCAAGCTTAGATATATCTGATGAGAGGAAAGTAATTGTGAGGCCTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000486911.2 |
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| CDS-3UTR CAA 90 bp | GCATTTCTAACAAGTTTCCCAGGTAATATTGATGCTGCTAGTCCAGAAACCACAACAAGATTTACTGTGTaGGTGTATTTTCCCATGACT | + |
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Preference number: 5 (lower is better) Translates to: AFLTSFPGNIDAASPETTTRFTV*VYFPMT Trigger: AGTCATGGGAAAATACACCAACACAGTAAATCTTGT...TGTGGTTTCTGGACTAGCAGCATCAATATTACCTGGGAAACTTGTTAGAAATGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000486911.2 |
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| CDS TCA 72 bp | CGCAGCCTTTCCGCCCCGGCTCTGGGTCAGCCCACGTaGCTCTTCTGGGAGGTCAAAGAGCATCGCTCTGCC | + |
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Preference number: 6 (lower is better) Translates to: RSLSAPALGQPT*LFWEVKEHRSA Trigger: GGCAGAGCGATGCTCTTTGACCTCCCAGAAGAGTCACGTGGGCTGACCCAGAGCCGGGGCGGAAAGGCTGCG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000377031.7 ENST00000479413.1 |
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| CDS TCA 72 bp | GACCCCTGCTCCACAGGGAGACAAACTCAAACATCATaGCTAGAGTTTGCAGATAAAGACTTGGTCTGCACA | + |
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Preference number: 6 (lower is better) Translates to: DPCSTGRQTQTS*LEFADKDLVCT Trigger: TGTGCAGACCAAGTCTTTATCTGCAAACTCTAGTCATGATGTTTGAGTTTGTCTCCCTGTGGAGCAGGGGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000377027.1 ENST00000473252.5 |
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