Pregenerated sensors for C9ORF64 (Homo sapiens)
Ensembl gene IDs: ENSG00000165118Ensembl transcript IDs: ENST00000314700.5, ENST00000376340.2, ENST00000376344.8
Found 86 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGGCTCAAGCAATCCACCCTCCTCAGCCTCAGCCTACCGCGTATTTaGGATTACAGAGCGTGCCACCATGCTAGGCTAATTTTTAAATTT | + |
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Preference number: 1 (lower is better) Translates to: GLKQSTLLSLSLPRI*DYRACHHARLIFKF Trigger: AAATTTAAAAATTAGCCTAGCATGGTGGCACGCTCTGTAATCCCAAATACGCGGTAGGCTGAGGCTGAGGAGGGTGGATTGCTTGAGCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000314700.5 ENST00000376344.8 |
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| 3UTR-3UTR CCA 90 bp | CCTAGGAAGTATTTTTCAAGTGAGAATGGGCAATCAATTTCCTATAACCTCGATGCAGGGGGTTTTCTTTaGATCAGTTTACACTTGAGG | + |
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Preference number: 2 (lower is better) Translates to: PRKYFSSENGQSISYNLDAGGFL*ISLHLR Trigger: CCTCAAGTGTAAACTGATCCAAAGAAAACCCCCTGC...ATCGAGGTTATAGGAAATTGATTGCCCATTCTCACTTGAAAAATACTTCCTAGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000314700.5 ENST00000376344.8 |
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| 3UTR-3UTR TCA 90 bp | CCTAGGAAGTATTTTTCAAGTGAGAATGGGCAATCAATTTCCTATAACCTCGATACTGTACAGATGATATaGTATAAAACGCAGGGGGTT | + |
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Preference number: 2 (lower is better) Translates to: PRKYFSSENGQSISYNLDTVQMI*YKTQGV Trigger: AACCCCCTGCGTTTTATATCATATCATCTGTACAGT...ATCGAGGTTATAGGAAATTGATTGCCCATTCTCACTTGAAAAATACTTCCTAGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000314700.5 ENST00000376344.8 |
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| 3UTR CCA 72 bp | ACAAGGTCTCCATCTGTTGCCCAGGATAGAATGCAGTaGCGTGACTGTGGCTCACTGCAGCCTCAAACCCCT | + |
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Preference number: 3 (lower is better) Translates to: TRSPSVAQDRMQ*RDCGSLQPQTP Trigger: AGGGGTTTGAGGCTGCAGTGAGCCACAGTCACGCCACTGCATTCTATCCTGGGCAACAGATGGAGACCTTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000314700.5 ENST00000376344.8 |
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| 3UTR CCA 72 bp | CAATCCACCCTCCTCAGCCTCAGCCTACCGCGTATTTaGGATTACAGAGCGTGCCACCATGCTAGGCTAATT | + |
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Preference number: 3 (lower is better) Translates to: QSTLLSLSLPRI*DYRACHHARLI Trigger: AATTAGCCTAGCATGGTGGCACGCTCTGTAATCCCAAATACGCGGTAGGCTGAGGCTGAGGAGGGTGGATTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000314700.5 ENST00000376344.8 |
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| 3UTR GCA 72 bp | CTGAGGCTGGAGTGCAATGGCCTAATCTCGCCTCACTaGAACCTCCACCTTCTGAGTTCAAGCGATTCTCTT | + |
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Preference number: 3 (lower is better) Translates to: LRLECNGLISPH*NLHLLSSSDSL Trigger: AAGAGAATCGCTTGAACTCAGAAGGTGGAGGTTGCAGTGAGGCGAGATTAGGCCATTGCACTCCAGCCTCAG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000314700.5 ENST00000376344.8 |
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| 3UTR-3UTR CAA 90 bp | CCTAGGAAGTATTTTTCAAGTGAGAATGGGCAATCAATTTCCTATAACCTCGATCGCAGGGGGTTTTCTTaGGATCAGTTTACACTTGAG | + |
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Preference number: 3 (lower is better) Translates to: PRKYFSSENGQSISYNLDRRGFS*DQFTLE Trigger: CTCAAGTGTAAACTGATCCAAAGAAAACCCCCTGCG...ATCGAGGTTATAGGAAATTGATTGCCCATTCTCACTTGAAAAATACTTCCTAGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000314700.5 ENST00000376344.8 |
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| CDS-3UTR GCA 90 bp | CCTAGGAAGTATTTTTCAAGTGAGAATGGGCAATCAATTTCCTATAACCTCGATTGCCCTGGGTCGCGATaGCCCCACCCCGCTCCCACC | + |
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Preference number: 4 (lower is better) Translates to: PRKYFSSENGQSISYNLDCPGSR*PHPAPT Trigger: GGTGGGAGCGGGGTGGGGGCATCGCGACCCAGGGCA...ATCGAGGTTATAGGAAATTGATTGCCCATTCTCACTTGAAAAATACTTCCTAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000314700.5 |
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| CDS-3UTR GCA 90 bp | CCTAGGAAGTATTTTTCAAGTGAGAATGGGCAATCAATTTCCTATAACCTCGATGGCGACTCGCCGCCTTaGCCTGGGTCGCGATGCCCC | + |
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Preference number: 4 (lower is better) Translates to: PRKYFSSENGQSISYNLDGDSPP*PGSRCP Trigger: GGGGCATCGCGACCCAGGGCAAGGCGGCGAGTCGCC...ATCGAGGTTATAGGAAATTGATTGCCCATTCTCACTTGAAAAATACTTCCTAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000314700.5 |
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| CDS-3UTR CCA 90 bp | CCTAGGAAGTATTTTTCAAGTGAGAATGGGCAATCAATTTCCTATAACCTCGATCTCGCCGCCTTGCCCTaGGTCGCGATGCCCCCACCC | + |
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Preference number: 4 (lower is better) Translates to: PRKYFSSENGQSISYNLDLAALP*VAMPPP Trigger: GGGTGGGGGCATCGCGACCCAGGGCAAGGCGGCGAG...ATCGAGGTTATAGGAAATTGATTGCCCATTCTCACTTGAAAAATACTTCCTAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000314700.5 |
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| CDS-3UTR CCA 90 bp | CCTAGGAAGTATTTTTCAAGTGAGAATGGGCAATCAATTTCCTATAACCTCGATCTCCACGCGCAGCTCTaGCCCCGCCGCCTTGGCCAG | + |
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Preference number: 4 (lower is better) Translates to: PRKYFSSENGQSISYNLDLHAQL*PRRLGQ Trigger: CTGGCCAAGGCGGCGGGGCCAGAGCTGCGCGTGGAG...ATCGAGGTTATAGGAAATTGATTGCCCATTCTCACTTGAAAAATACTTCCTAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000376344.8 |
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| CDS-3UTR TCA 90 bp | CCTAGGAAGTATTTTTCAAGTGAGAATGGGCAATCAATTTCCTATAACCTCGATCGTCGAGGGCTCTGTTaGCGGCGGCGCACAGGGACC | + |
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Preference number: 4 (lower is better) Translates to: PRKYFSSENGQSISYNLDRRGLC*RRRTGT Trigger: GGTCCCTGTGCGCCGCCGTCAACAGAGCCCTCGACG...ATCGAGGTTATAGGAAATTGATTGCCCATTCTCACTTGAAAAATACTTCCTAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000314700.5 ENST00000376344.8 |
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| CDS-3UTR CCA 90 bp | CCTAGGAAGTATTTTTCAAGTGAGAATGGGCAATCAATTTCCTATAACCTCGATCCCGGGGCAGCTCGCTaGGCAGAGGCCGCAAGCACT | + |
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Preference number: 4 (lower is better) Translates to: PRKYFSSENGQSISYNLDPGAAR*AEAAST Trigger: AGTGCTTGCGGCCTCTGCCCAGCGAGCTGCCCCGGG...ATCGAGGTTATAGGAAATTGATTGCCCATTCTCACTTGAAAAATACTTCCTAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000376344.8 |
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| CDS-3UTR TCA 90 bp | CCTAGGAAGTATTTTTCAAGTGAGAATGGGCAATCAATTTCCTATAACCTCGATTCACGAACACCCAGTTaGCCGCGGCCTCGTCGGCCG | + |
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Preference number: 4 (lower is better) Translates to: PRKYFSSENGQSISYNLDSRTPS*PRPRRP Trigger: CGGCCGACGAGGCCGCGGTCAACTGGGTGTTCGTGA...ATCGAGGTTATAGGAAATTGATTGCCCATTCTCACTTGAAAAATACTTCCTAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000376344.8 |
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| CDS-3UTR GCA 90 bp | CCTAGGAAGTATTTTTCAAGTGAGAATGGGCAATCAATTTCCTATAACCTCGATGGAGCCCGTCCATTCTaGCCTTTGGGACCCGGCGGG | + |
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Preference number: 4 (lower is better) Translates to: PRKYFSSENGQSISYNLDGARPF*PLGPGG Trigger: CCCGCCGGGTCCCAAAGGGCAGAATGGACGGGCTCC...ATCGAGGTTATAGGAAATTGATTGCCCATTCTCACTTGAAAAATACTTCCTAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000376344.8 |
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| CDS-3UTR CCA 90 bp | CCTAGGAAGTATTTTTCAAGTGAGAATGGGCAATCAATTTCCTATAACCTCGATCCTCGTCGGCCGCCCTaGGGTTCAGCTCATGAAGGG | + |
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Preference number: 4 (lower is better) Translates to: PRKYFSSENGQSISYNLDPRRPP*GSAHEG Trigger: CCCTTCATGAGCTGAACCCCAGGGCGGCCGACGAGG...ATCGAGGTTATAGGAAATTGATTGCCCATTCTCACTTGAAAAATACTTCCTAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000376344.8 |
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| CDS-3UTR GCA 90 bp | CCTAGGAAGTATTTTTCAAGTGAGAATGGGCAATCAATTTCCTATAACCTCGATAACAAGGTCCCGCCCTaGCAGGGAGTGGCACCGAGA | + |
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Preference number: 4 (lower is better) Translates to: PRKYFSSENGQSISYNLDNKVPP*QGVAPR Trigger: TCTCGGTGCCACTCCCTGGCAGGGCGGGACCTTGTT...ATCGAGGTTATAGGAAATTGATTGCCCATTCTCACTTGAAAAATACTTCCTAGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000376344.8 |
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| CDS-3UTR GCA 90 bp | CCTAGGAAGTATTTTTCAAGTGAGAATGGGCAATCAATTTCCTATAACCTCGATGTCCACTCTGCGCCTTaGGCTACTACGAACCGCGCG | + |
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Preference number: 4 (lower is better) Translates to: PRKYFSSENGQSISYNLDVHSAP*ATTNRA Trigger: CGCGCGGTTCGTAGTAGCGCAAGGCGCAGAGTGGAC...ATCGAGGTTATAGGAAATTGATTGCCCATTCTCACTTGAAAAATACTTCCTAGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000376344.8 |
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| CDS-3UTR CCA 90 bp | CCTAGGAAGTATTTTTCAAGTGAGAATGGGCAATCAATTTCCTATAACCTCGATCCCGCTTCGGACAGGTaGGACTCGAAGACGGCGACT | + |
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Preference number: 4 (lower is better) Translates to: PRKYFSSENGQSISYNLDPASDR*DSKTAT Trigger: AGTCGCCGTCTTCGAGTCCCACCTGTCCGAAGCGGG...ATCGAGGTTATAGGAAATTGATTGCCCATTCTCACTTGAAAAATACTTCCTAGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000314700.5 |
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| CDS-3UTR TCA 90 bp | CCTAGGAAGTATTTTTCAAGTGAGAATGGGCAATCAATTTCCTATAACCTCGATCCCGCGGCGTTGCCCTaGTTAGGAAACCAGAGAGAC | + |
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Preference number: 4 (lower is better) Translates to: PRKYFSSENGQSISYNLDPAALP*LGNQRD Trigger: GTCTCTCTGGTTTCCTAATCAGGGCAACGCCGCGGG...ATCGAGGTTATAGGAAATTGATTGCCCATTCTCACTTGAAAAATACTTCCTAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000376344.8 |
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| CDS-3UTR TCA 90 bp | CCTAGGAAGTATTTTTCAAGTGAGAATGGGCAATCAATTTCCTATAACCTCGATCTGGGGTTCAGCTCATaGAGGGCTTTCCACCCCTCC | + |
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Preference number: 4 (lower is better) Translates to: PRKYFSSENGQSISYNLDLGFSS*RAFHPS Trigger: GGAGGGGTGGAAAGCCCTTCATGAGCTGAACCCCAG...ATCGAGGTTATAGGAAATTGATTGCCCATTCTCACTTGAAAAATACTTCCTAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000376344.8 |
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| CDS-3UTR GCA 90 bp | CCTAGGAAGTATTTTTCAAGTGAGAATGGGCAATCAATTTCCTATAACCTCGATGTGACTGTGGCTCACTaGAGCCTCAAACCCCTGGGC | + |
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Preference number: 4 (lower is better) Translates to: PRKYFSSENGQSISYNLDVTVAH*SLKPLG Trigger: GCCCAGGGGTTTGAGGCTGCAGTGAGCCACAGTCAC...ATCGAGGTTATAGGAAATTGATTGCCCATTCTCACTTGAAAAATACTTCCTAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000314700.5 ENST00000376344.8 |
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| CDS-3UTR CCA 90 bp | CCTAGGAAGTATTTTTCAAGTGAGAATGGGCAATCAATTTCCTATAACCTCGATCGCCCTGCCAGGGAGTaGCACCGAGAACTTAGTGCA | + |
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Preference number: 4 (lower is better) Translates to: PRKYFSSENGQSISYNLDRPARE*HRELSA Trigger: TGCACTAAGTTCTCGGTGCCACTCCCTGGCAGGGCG...ATCGAGGTTATAGGAAATTGATTGCCCATTCTCACTTGAAAAATACTTCCTAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000376344.8 |
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| CDS-3UTR CCA 90 bp | CCTAGGAAGTATTTTTCAAGTGAGAATGGGCAATCAATTTCCTATAACCTCGATGTCCATTCTGCCCTTTaGGACCCGGCGGGCCAAACT | + |
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Preference number: 4 (lower is better) Translates to: PRKYFSSENGQSISYNLDVHSAL*DPAGQT Trigger: AGTTTGGCCCGCCGGGTCCCAAAGGGCAGAATGGAC...ATCGAGGTTATAGGAAATTGATTGCCCATTCTCACTTGAAAAATACTTCCTAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000376344.8 |
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| CDS-3UTR GCA 90 bp | CCTAGGAAGTATTTTTCAAGTGAGAATGGGCAATCAATTTCCTATAACCTCGATCTCACCACACACTTGTaGTCGTCCCCGCTTCGGACA | + |
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Preference number: 4 (lower is better) Translates to: PRKYFSSENGQSISYNLDLTTHL*SSPLRT Trigger: TGTCCGAAGCGGGGACGAGCACAAGTGTGTGGTGAG...ATCGAGGTTATAGGAAATTGATTGCCCATTCTCACTTGAAAAATACTTCCTAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000314700.5 |
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| CDS-3UTR TCA 90 bp | CCTAGGAAGTATTTTTCAAGTGAGAATGGGCAATCAATTTCCTATAACCTCGATGTGGTCTCAAACTCCTaGCCTCAGATGATCCACCCG | + |
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Preference number: 4 (lower is better) Translates to: PRKYFSSENGQSISYNLDVVSNS*PQMIHP Trigger: CGGGTGGATCATCTGAGGTCAGGAGTTTGAGACCAC...ATCGAGGTTATAGGAAATTGATTGCCCATTCTCACTTGAAAAATACTTCCTAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000314700.5 ENST00000376344.8 |
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| CDS-3UTR GCA 90 bp | CCTAGGAAGTATTTTTCAAGTGAGAATGGGCAATCAATTTCCTATAACCTCGATCTCACCACACACTTGTaGTCGTCCTGCTCCGACCAA | + |
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Preference number: 4 (lower is better) Translates to: PRKYFSSENGQSISYNLDLTTHL*SSCSDQ Trigger: TTGGTCGGAGCAGGACGAGCACAAGTGTGTGGTGAG...ATCGAGGTTATAGGAAATTGATTGCCCATTCTCACTTGAAAAATACTTCCTAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000376344.8 |
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| CDS-3UTR GCA 90 bp | CCTAGGAAGTATTTTTCAAGTGAGAATGGGCAATCAATTTCCTATAACCTCGATGGTCAAGGTCCACTCTaGGCCTTGCGCTACTACGAA | + |
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Preference number: 4 (lower is better) Translates to: PRKYFSSENGQSISYNLDGQGPL*ALRYYE Trigger: TTCGTAGTAGCGCAAGGCGCAGAGTGGACCTTGACC...ATCGAGGTTATAGGAAATTGATTGCCCATTCTCACTTGAAAAATACTTCCTAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000376344.8 |
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| CDS-3UTR CCA 90 bp | CCTAGGAAGTATTTTTCAAGTGAGAATGGGCAATCAATTTCCTATAACCTCGATGAGGCTGGAGTGCAATaGCCTAATCTCGCCTCACTG | + |
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Preference number: 4 (lower is better) Translates to: PRKYFSSENGQSISYNLDEAGVQ*PNLASL Trigger: CAGTGAGGCGAGATTAGGCCATTGCACTCCAGCCTC...ATCGAGGTTATAGGAAATTGATTGCCCATTCTCACTTGAAAAATACTTCCTAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000314700.5 ENST00000376344.8 |
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| CDS-3UTR TCA 90 bp | CCTAGGAAGTATTTTTCAAGTGAGAATGGGCAATCAATTTCCTATAACCTCGATAGTATATTCCGAACCTaGTCCAGGGTCACTGTCGCG | + |
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Preference number: 4 (lower is better) Translates to: PRKYFSSENGQSISYNLDSIFRT*SRVTVA Trigger: CGCGACAGTGACCCTGGATCAGGTTCGGAATATACT...ATCGAGGTTATAGGAAATTGATTGCCCATTCTCACTTGAAAAATACTTCCTAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000314700.5 ENST00000376344.8 |
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| CDS-3UTR TCA 90 bp | CCTAGGAAGTATTTTTCAAGTGAGAATGGGCAATCAATTTCCTATAACCTCGATAAAGCGAGCACCCTCTaGTTTCCACCTCTTGCCTGT | + |
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Preference number: 4 (lower is better) Translates to: PRKYFSSENGQSISYNLDKASTL*FPPLAC Trigger: ACAGGCAAGAGGTGGAAATCAGAGGGTGCTCGCTTT...ATCGAGGTTATAGGAAATTGATTGCCCATTCTCACTTGAAAAATACTTCCTAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000314700.5 ENST00000376344.8 |
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| CDS-3UTR GCA 90 bp | CCTAGGAAGTATTTTTCAAGTGAGAATGGGCAATCAATTTCCTATAACCTCGATCACTTGTGCTCGTCCTaGTCCGACCAAAAGGAGAAG | + |
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Preference number: 4 (lower is better) Translates to: PRKYFSSENGQSISYNLDHLCSS*SDQKEK Trigger: CTTCTCCTTTTGGTCGGAGCAGGACGAGCACAAGTG...ATCGAGGTTATAGGAAATTGATTGCCCATTCTCACTTGAAAAATACTTCCTAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000376344.8 |
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| CDS-3UTR CCA 90 bp | CCTAGGAAGTATTTTTCAAGTGAGAATGGGCAATCAATTTCCTATAACCTCGATCGAGGCACTAGTTATTaGTATCCCTTCGTCGAGGGC | + |
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Preference number: 4 (lower is better) Translates to: PRKYFSSENGQSISYNLDRGTSY*YPFVEG Trigger: GCCCTCGACGAAGGGATACCAATAACTAGTGCCTCG...ATCGAGGTTATAGGAAATTGATTGCCCATTCTCACTTGAAAAATACTTCCTAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000314700.5 ENST00000376344.8 |
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| CDS-3UTR CCA 90 bp | CCTAGGAAGTATTTTTCAAGTGAGAATGGGCAATCAATTTCCTATAACCTCGATGGGGTTTCACCATGTTaGCCAGGTGGTCTCAAACTC | + |
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Preference number: 4 (lower is better) Translates to: PRKYFSSENGQSISYNLDGVSPC*PGGLKL Trigger: GAGTTTGAGACCACCTGGCCAACATGGTGAAACCCC...ATCGAGGTTATAGGAAATTGATTGCCCATTCTCACTTGAAAAATACTTCCTAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000314700.5 ENST00000376344.8 |
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| CDS-3UTR GCA 90 bp | CCTAGGAAGTATTTTTCAAGTGAGAATGGGCAATCAATTTCCTATAACCTCGATCTAATCTCGCCTCACTaGAACCTCCACCTTCTGAGT | + |
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Preference number: 4 (lower is better) Translates to: PRKYFSSENGQSISYNLDLISPH*NLHLLS Trigger: ACTCAGAAGGTGGAGGTTGCAGTGAGGCGAGATTAG...ATCGAGGTTATAGGAAATTGATTGCCCATTCTCACTTGAAAAATACTTCCTAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000314700.5 ENST00000376344.8 |
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| CDS-3UTR TCA 90 bp | CCTAGGAAGTATTTTTCAAGTGAGAATGGGCAATCAATTTCCTATAACCTCGATTTTCTCGGACGCAGTTaGGAAAAGAGCCTCCAAACT | + |
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Preference number: 4 (lower is better) Translates to: PRKYFSSENGQSISYNLDFLGRS*EKSLQT Trigger: AGTTTGGAGGCTCTTTTCTCAACTGCGTCCGAGAAA...ATCGAGGTTATAGGAAATTGATTGCCCATTCTCACTTGAAAAATACTTCCTAGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000314700.5 ENST00000376344.8 |
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| CDS-3UTR TCA 90 bp | CCTAGGAAGTATTTTTCAAGTGAGAATGGGCAATCAATTTCCTATAACCTCGATACCAAAAGGAGAAGTTaGGCGTGTCTGTCACGAACA | + |
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Preference number: 4 (lower is better) Translates to: PRKYFSSENGQSISYNLDTKRRS*ACLSRT Trigger: TGTTCGTGACAGACACGCTCAACTTCTCCTTTTGGT...ATCGAGGTTATAGGAAATTGATTGCCCATTCTCACTTGAAAAATACTTCCTAGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000376344.8 |
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| CDS-3UTR GCA 90 bp | CCTAGGAAGTATTTTTCAAGTGAGAATGGGCAATCAATTTCCTATAACCTCGATCTGATTTCCACCTCTTaGCTGTCTCCATATGAGAGC | + |
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Preference number: 4 (lower is better) Translates to: PRKYFSSENGQSISYNLDLISTS*LSPYES Trigger: GCTCTCATATGGAGACAGGCAAGAGGTGGAAATCAG...ATCGAGGTTATAGGAAATTGATTGCCCATTCTCACTTGAAAAATACTTCCTAGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000314700.5 ENST00000376344.8 |
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| CDS-3UTR GCA 90 bp | CCTAGGAAGTATTTTTCAAGTGAGAATGGGCAATCAATTTCCTATAACCTCGATTTCAAGCGATTCTCTTaGCTCAGCCTCCCAAGTAAC | + |
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Preference number: 4 (lower is better) Translates to: PRKYFSSENGQSISYNLDFKRFS*LSLPSN Trigger: GTTACTTGGGAGGCTGAGGCAAGAGAATCGCTTGAA...ATCGAGGTTATAGGAAATTGATTGCCCATTCTCACTTGAAAAATACTTCCTAGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000314700.5 ENST00000376344.8 |
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| CDS-3UTR CCA 90 bp | CCTAGGAAGTATTTTTCAAGTGAGAATGGGCAATCAATTTCCTATAACCTCGATATGAGCCACCACATCTaGCCTAGGAAGTTTTGTTGT | + |
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Preference number: 4 (lower is better) Translates to: PRKYFSSENGQSISYNLDMSHHI*PRKFCC Trigger: ACAACAAAACTTCCTAGGCCAGATGTGGTGGCTCAT...ATCGAGGTTATAGGAAATTGATTGCCCATTCTCACTTGAAAAATACTTCCTAGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000314700.5 ENST00000376344.8 |
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| CDS-3UTR TCA 90 bp | CCTAGGAAGTATTTTTCAAGTGAGAATGGGCAATCAATTTCCTATAACCTCGATAGAGCATTTCTCCTTTaGGAAGCTTCTTCAGTAGGT | + |
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Preference number: 4 (lower is better) Translates to: PRKYFSSENGQSISYNLDRAFLL*EASSVG Trigger: ACCTACTGAAGAAGCTTCTCAAAGGAGAAATGCTCT...ATCGAGGTTATAGGAAATTGATTGCCCATTCTCACTTGAAAAATACTTCCTAGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000314700.5 ENST00000376344.8 |
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| CDS-3UTR GCA 90 bp | CCTAGGAAGTATTTTTCAAGTGAGAATGGGCAATCAATTTCCTATAACCTCGATTCATTGAGAATCCGATaGCTCTCTTCTACTAAAGGC | + |
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Preference number: 4 (lower is better) Translates to: PRKYFSSENGQSISYNLDSLRIR*LSSTKG Trigger: GCCTTTAGTAGAAGAGAGGCATCGGATTCTCAATGA...ATCGAGGTTATAGGAAATTGATTGCCCATTCTCACTTGAAAAATACTTCCTAGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000314700.5 ENST00000376344.8 |
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| CDS-3UTR CCA 90 bp | CCTAGGAAGTATTTTTCAAGTGAGAATGGGCAATCAATTTCCTATAACCTCGATCTTCTACTAAAGGCATaGAAACGTCTGTGTCAGAAC | + |
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Preference number: 4 (lower is better) Translates to: PRKYFSSENGQSISYNLDLLLKA*KRLCQN Trigger: GTTCTGACACAGACGTTTCCATGCCTTTAGTAGAAG...ATCGAGGTTATAGGAAATTGATTGCCCATTCTCACTTGAAAAATACTTCCTAGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000314700.5 ENST00000376344.8 |
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| CDS-3UTR TCA 90 bp | CCTAGGAAGTATTTTTCAAGTGAGAATGGGCAATCAATTTCCTATAACCTCGATATGCAACGTATGCGATaGAACGGAATTCCTTTCATA | + |
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Preference number: 4 (lower is better) Translates to: PRKYFSSENGQSISYNLDMQRMR*NGIPFI Trigger: TATGAAAGGAATTCCGTTTCATCGCATACGTTGCAT...ATCGAGGTTATAGGAAATTGATTGCCCATTCTCACTTGAAAAATACTTCCTAGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000314700.5 ENST00000376344.8 |
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| CDS-3UTR GCA 90 bp | CCTAGGAAGTATTTTTCAAGTGAGAATGGGCAATCAATTTCCTATAACCTCGATAGGTGCATTAACTTCTaGGCACTATTCTCACTTTCT | + |
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Preference number: 4 (lower is better) Translates to: PRKYFSSENGQSISYNLDRCINF*ALFSLS Trigger: AGAAAGTGAGAATAGTGCGCAGAAGTTAATGCACCT...ATCGAGGTTATAGGAAATTGATTGCCCATTCTCACTTGAAAAATACTTCCTAGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000314700.5 ENST00000376344.8 |
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| CDS-3UTR GCA 90 bp | CCTAGGAAGTATTTTTCAAGTGAGAATGGGCAATCAATTTCCTATAACCTCGATGAGGTCAATAATATATaGAACGTATGCGATGAAACG | + |
|
Preference number: 4 (lower is better) Translates to: PRKYFSSENGQSISYNLDEVNNI*NVCDET Trigger: CGTTTCATCGCATACGTTGCATATATTATTGACCTC...ATCGAGGTTATAGGAAATTGATTGCCCATTCTCACTTGAAAAATACTTCCTAGG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000314700.5 ENST00000376344.8 |
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| CDS-3UTR GCA 90 bp | CCTAGGAAGTATTTTTCAAGTGAGAATGGGCAATCAATTTCCTATAACCTCGATAATATATGCAACGTATaGGATGAAACGGAATTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: PRKYFSSENGQSISYNLDNICNV*DETEFL Trigger: AAGGAATTCCGTTTCATCGCATACGTTGCATATATT...ATCGAGGTTATAGGAAATTGATTGCCCATTCTCACTTGAAAAATACTTCCTAGG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000314700.5 ENST00000376344.8 |
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| CDS GCA 90 bp | CCAAACTCTTCCCGCCCTAGGCGGGTCAAGGTCCACTCTGCGCCTTaGGCTACTACGAACCGCGCGATCACAGGGCCTAAACAAGGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: PNSSRPRRVKVHSAP*ATTNRAITGPKQGP Trigger: GGGACCTTGTTTAGGCCCTGTGATCGCGCGGTTCGTAGTAGCGCAAGGCGCAGAGTGGACCTTGACCCGCCTAGGGCGGGAAGAGTTTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376344.8 |
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| CDS-3UTR CAA 90 bp | CCTAGGAAGTATTTTTCAAGTGAGAATGGGCAATCAATTTCCTATAACCTCGATCGGCGACTCGCCGCCTaGCCCTGGGTCGCGATGCCC | + |
|
Preference number: 5 (lower is better) Translates to: PRKYFSSENGQSISYNLDRRLAA*PWVAMP Trigger: GGGCATCGCGACCCAGGGCAAGGCGGCGAGTCGCCG...ATCGAGGTTATAGGAAATTGATTGCCCATTCTCACTTGAAAAATACTTCCTAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000314700.5 |
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| CDS TCA 90 bp | GAAGACAATCCCGGATCAGCTCAACACACCAAAGCGAGCACCCTCTaGTTTCCACCTCTTGCCTGTCTCCATATGAGAGCATTTCTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: EDNPGSAQHTKASTL*FPPLACLHMRAFLL Trigger: AAGGAGAAATGCTCTCATATGGAGACAGGCAAGAGGTGGAAATCAGAGGGTGCTCGCTTTGGTGTGTTGAGCTGATCCGGGATTGTCTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000314700.5 ENST00000376344.8 |
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| CDS-3UTR CAA 90 bp | CCTAGGAAGTATTTTTCAAGTGAGAATGGGCAATCAATTTCCTATAACCTCGATTCGTCGAGGGCTCTGTaGACGGCGGCGCACAGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: PRKYFSSENGQSISYNLDSSRAL*TAAHRD Trigger: GTCCCTGTGCGCCGCCGTCAACAGAGCCCTCGACGA...ATCGAGGTTATAGGAAATTGATTGCCCATTCTCACTTGAAAAATACTTCCTAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000314700.5 ENST00000376344.8 |
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| CDS-3UTR CAA 90 bp | CCTAGGAAGTATTTTTCAAGTGAGAATGGGCAATCAATTTCCTATAACCTCGATGTCACGAACACCCAGTaGACCGCGGCCTCGTCGGCC | + |
|
Preference number: 5 (lower is better) Translates to: PRKYFSSENGQSISYNLDVTNTQ*TAASSA Trigger: GGCCGACGAGGCCGCGGTCAACTGGGTGTTCGTGAC...ATCGAGGTTATAGGAAATTGATTGCCCATTCTCACTTGAAAAATACTTCCTAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000376344.8 |
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| CDS-3UTR CAA 90 bp | CCTAGGAAGTATTTTTCAAGTGAGAATGGGCAATCAATTTCCTATAACCTCGATGGTCCACTCTGCGCCTaGCGCTACTACGAACCGCGC | + |
|
Preference number: 5 (lower is better) Translates to: PRKYFSSENGQSISYNLDGPLCA*RYYEPR Trigger: GCGCGGTTCGTAGTAGCGCAAGGCGCAGAGTGGACC...ATCGAGGTTATAGGAAATTGATTGCCCATTCTCACTTGAAAAATACTTCCTAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000376344.8 |
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| CDS-3UTR CAA 90 bp | CCTAGGAAGTATTTTTCAAGTGAGAATGGGCAATCAATTTCCTATAACCTCGATCGTCCATTCTGCCCTTaGGGACCCGGCGGGCCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: PRKYFSSENGQSISYNLDRPFCP*GPGGPN Trigger: GTTTGGCCCGCCGGGTCCCAAAGGGCAGAATGGACG...ATCGAGGTTATAGGAAATTGATTGCCCATTCTCACTTGAAAAATACTTCCTAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000376344.8 |
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| CDS TCA 90 bp | GGTGCATTAACTTCTGCGCACTATTCTCACTTTCTCGGACGCAGTTaGGAAAAGAGCCTCCAAACTTCTCCAGCAGAATTTTCCCGGTTT | + |
|
Preference number: 5 (lower is better) Translates to: GALTSAHYSHFLGRS*EKSLQTSPAEFSRF Trigger: AAACCGGGAAAATTCTGCTGGAGAAGTTTGGAGGCTCTTTTCTCAACTGCGTCCGAGAAAGTGAGAATAGTGCGCAGAAGTTAATGCACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000314700.5 ENST00000376340.2 ENST00000376344.8 |
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| CDS-3UTR CAA 90 bp | CCTAGGAAGTATTTTTCAAGTGAGAATGGGCAATCAATTTCCTATAACCTCGATTACCTCACCACACACTaGTGCTCGTCCCCGCTTCGG | + |
|
Preference number: 5 (lower is better) Translates to: PRKYFSSENGQSISYNLDYLTTH*CSSPLR Trigger: CCGAAGCGGGGACGAGCACAAGTGTGTGGTGAGGTA...ATCGAGGTTATAGGAAATTGATTGCCCATTCTCACTTGAAAAATACTTCCTAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000314700.5 |
||
| CDS-3UTR CAA 90 bp | CCTAGGAAGTATTTTTCAAGTGAGAATGGGCAATCAATTTCCTATAACCTCGATTACCTCACCACACACTaGTGCTCGTCCTGCTCCGAC | + |
|
Preference number: 5 (lower is better) Translates to: PRKYFSSENGQSISYNLDYLTTH*CSSCSD Trigger: GTCGGAGCAGGACGAGCACAAGTGTGTGGTGAGGTA...ATCGAGGTTATAGGAAATTGATTGCCCATTCTCACTTGAAAAATACTTCCTAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000376344.8 |
||
| CDS-3UTR CAA 90 bp | CCTAGGAAGTATTTTTCAAGTGAGAATGGGCAATCAATTTCCTATAACCTCGATTGGGGTTTCACCATGTaGGCCAGGTGGTCTCAAACT | + |
|
Preference number: 5 (lower is better) Translates to: PRKYFSSENGQSISYNLDWGFTM*ARWSQT Trigger: AGTTTGAGACCACCTGGCCAACATGGTGAAACCCCA...ATCGAGGTTATAGGAAATTGATTGCCCATTCTCACTTGAAAAATACTTCCTAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000314700.5 ENST00000376344.8 |
||
| CDS-3UTR CAA 90 bp | CCTAGGAAGTATTTTTCAAGTGAGAATGGGCAATCAATTTCCTATAACCTCGATCTTTCTCGGACGCAGTaGAGAAAAGAGCCTCCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: PRKYFSSENGQSISYNLDLSRTQ*RKEPPN Trigger: GTTTGGAGGCTCTTTTCTCAACTGCGTCCGAGAAAG...ATCGAGGTTATAGGAAATTGATTGCCCATTCTCACTTGAAAAATACTTCCTAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000314700.5 ENST00000376344.8 |
||
| CDS-3UTR CAA 90 bp | CCTAGGAAGTATTTTTCAAGTGAGAATGGGCAATCAATTTCCTATAACCTCGATGACCAAAAGGAGAAGTaGAGCGTGTCTGTCACGAAC | + |
|
Preference number: 5 (lower is better) Translates to: PRKYFSSENGQSISYNLDDQKEK*SVSVTN Trigger: GTTCGTGACAGACACGCTCAACTTCTCCTTTTGGTC...ATCGAGGTTATAGGAAATTGATTGCCCATTCTCACTTGAAAAATACTTCCTAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000376344.8 |
||
| CDS-3UTR CAA 90 bp | CCTAGGAAGTATTTTTCAAGTGAGAATGGGCAATCAATTTCCTATAACCTCGATATTTTCCCGGTTTCATaGAGAATCCGATGCCTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: PRKYFSSENGQSISYNLDIFPVS*RIRCLS Trigger: AGAGAGGCATCGGATTCTCAATGAAACCGGGAAAAT...ATCGAGGTTATAGGAAATTGATTGCCCATTCTCACTTGAAAAATACTTCCTAGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000314700.5 ENST00000376344.8 |
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| CDS-3UTR CAA 90 bp | CCTAGGAAGTATTTTTCAAGTGAGAATGGGCAATCAATTTCCTATAACCTCGATGAGAGCATTTCTCCTTaGAGAAGCTTCTTCAGTAGG | + |
|
Preference number: 5 (lower is better) Translates to: PRKYFSSENGQSISYNLDESISP*RSFFSR Trigger: CCTACTGAAGAAGCTTCTCAAAGGAGAAATGCTCTC...ATCGAGGTTATAGGAAATTGATTGCCCATTCTCACTTGAAAAATACTTCCTAGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000314700.5 ENST00000376344.8 |
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| CDS GCA 90 bp | TCTTTGGATCAGTTTACACTTGAGGTCAATAATATATGCAACGTATaGGATGAAACGGAATTCCTTTCATATCTTCCCTATGGTCATGGG | + |
|
Preference number: 5 (lower is better) Translates to: SLDQFTLEVNNICNV*DETEFLSYLPYGHG Trigger: CCCATGACCATAGGGAAGATATGAAAGGAATTCCGTTTCATCGCATACGTTGCATATATTATTGACCTCAAGTGTAAACTGATCCAAAGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000314700.5 ENST00000376344.8 |
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| CDS GCA 90 bp | AGGGGGTTTTCTTTGGATCAGTTTACACTTGAGGTCAATAATATATaGAACGTATGCGATGAAACGGAATTCCTTTCATATCTTCCCTAT | + |
|
Preference number: 5 (lower is better) Translates to: RGFSLDQFTLEVNNI*NVCDETEFLSYLPY Trigger: ATAGGGAAGATATGAAAGGAATTCCGTTTCATCGCATACGTTGCATATATTATTGACCTCAAGTGTAAACTGATCCAAAGAAAACCCCCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000314700.5 ENST00000376344.8 |
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| CDS-3UTR CAA 90 bp | CCTAGGAAGTATTTTTCAAGTGAGAATGGGCAATCAATTTCCTATAACCTCGATAGGTTTTTCACCCTTTaGTTCAATAAGCTCCAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: PRKYFSSENGQSISYNLDRFFTL*FNKLQK Trigger: CTTCTGGAGCTTATTGAACAAAAGGGTGAAAAACCT...ATCGAGGTTATAGGAAATTGATTGCCCATTCTCACTTGAAAAATACTTCCTAGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000314700.5 ENST00000376344.8 |
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| CDS-3UTR CAA 90 bp | CCTAGGAAGTATTTTTCAAGTGAGAATGGGCAATCAATTTCCTATAACCTCGATTCCAGAAGAATGGAATaGATCTCTCCATTAGGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: PRKYFSSENGQSISYNLDSRRME*ISPLGF Trigger: AAAACCTAATGGAGAGATCAATTCCATTCTTCTGGA...ATCGAGGTTATAGGAAATTGATTGCCCATTCTCACTTGAAAAATACTTCCTAGG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000314700.5 ENST00000376344.8 |
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| CDS GCA 72 bp | GGACAGGTGGGACTCGAAGACGGCGACTCGCCGCCTTaGCCTGGGTCGCGATGCCCCCACCCCGCTCCCACC | + |
|
Preference number: 6 (lower is better) Translates to: GQVGLEDGDSPP*PGSRCPHPAPT Trigger: GGTGGGAGCGGGGTGGGGGCATCGCGACCCAGGGCAAGGCGGCGAGTCGCCGTCTTCGAGTCCCACCTGTCC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000314700.5 |
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| CDS CAA 72 bp | CGGACAGGTGGGACTCGAAGACGGCGACTCGCCGCCTaGCCCTGGGTCGCGATGCCCCCACCCCGCTCCCAC | + |
|
Preference number: 6 (lower is better) Translates to: RTGGTRRRRLAA*PWVAMPPPRSH Trigger: GTGGGAGCGGGGTGGGGGCATCGCGACCCAGGGCAAGGCGGCGAGTCGCCGTCTTCGAGTCCCACCTGTCCG 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000314700.5 |
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| CDS CCA 72 bp | CACCACACACTTGTGCTCGTCCCCGCTTCGGACAGGTaGGACTCGAAGACGGCGACTCGCCGCCTTGCCCTG | + |
|
Preference number: 6 (lower is better) Translates to: HHTLVLVPASDR*DSKTATRRLAL Trigger: CAGGGCAAGGCGGCGAGTCGCCGTCTTCGAGTCCCACCTGTCCGAAGCGGGGACGAGCACAAGTGTGTGGTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000314700.5 |
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| CDS GCA 72 bp | TCCCGCCCTAGGCGGGTCAAGGTCCACTCTGCGCCTTaGGCTACTACGAACCGCGCGATCACAGGGCCTAAA | + |
|
Preference number: 6 (lower is better) Translates to: SRPRRVKVHSAP*ATTNRAITGPK Trigger: TTTAGGCCCTGTGATCGCGCGGTTCGTAGTAGCGCAAGGCGCAGAGTGGACCTTGACCCGCCTAGGGCGGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376344.8 |
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| CDS CAA 72 bp | AAGGAGAAGTTGAGCGTGTCTGTCACGAACACCCAGTaGACCGCGGCCTCGTCGGCCGCCCTGGGGTTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: KEKLSVSVTNTQ*TAASSAALGFS Trigger: GCTGAACCCCAGGGCGGCCGACGAGGCCGCGGTCAACTGGGTGTTCGTGACAGACACGCTCAACTTCTCCTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376344.8 |
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| CDS CAA 72 bp | ATTCCCTGGGATTTAGGAGCCCGTCCATTCTGCCCTTaGGGACCCGGCGGGCCAAACTCTTCCCGCCCTAGG | + |
|
Preference number: 6 (lower is better) Translates to: IPWDLGARPFCP*GPGGPNSSRPR Trigger: CCTAGGGCGGGAAGAGTTTGGCCCGCCGGGTCCCAAAGGGCAGAATGGACGGGCTCCTAAATCCCAGGGAAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376344.8 |
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| CDS CAA 90 bp | CTCACCACACACTTGTGCTCGTCCTGCTCCGACCAAAAGGAGAAGTaGAGCGTGTCTGTCACGAACACCCAGTTGACCGCGGCCTCGTCG | + |
|
Preference number: 6 (lower is better) Translates to: LTTHLCSSCSDQKEK*SVSVTNTQLTAASS Trigger: CGACGAGGCCGCGGTCAACTGGGTGTTCGTGACAGACACGCTCAACTTCTCCTTTTGGTCGGAGCAGGACGAGCACAAGTGTGTGGTGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000376340.2 ENST00000376344.8 |
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| CDS CAA 72 bp | GCACTAGTTATTGGTATCCCTTCGTCGAGGGCTCTGTaGACGGCGGCGCACAGGGACCAGTACCCACTGTAT | + |
|
Preference number: 6 (lower is better) Translates to: ALVIGIPSSRAL*TAAHRDQYPLY Trigger: ATACAGTGGGTACTGGTCCCTGTGCGCCGCCGTCAACAGAGCCCTCGACGAAGGGATACCAATAACTAGTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000314700.5 ENST00000376340.2 ENST00000376344.8 |
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| CDS CAA 72 bp | CACTTGTGCTCGTCCTGCTCCGACCAAAAGGAGAAGTaGAGCGTGTCTGTCACGAACACCCAGTTGACCGCG | + |
|
Preference number: 6 (lower is better) Translates to: HLCSSCSDQKEK*SVSVTNTQLTA Trigger: CGCGGTCAACTGGGTGTTCGTGACAGACACGCTCAACTTCTCCTTTTGGTCGGAGCAGGACGAGCACAAGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000376340.2 ENST00000376344.8 |
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| CDS TCA 72 bp | CCCGGATCAGCTCAACACACCAAAGCGAGCACCCTCTaGTTTCCACCTCTTGCCTGTCTCCATATGAGAGCA | + |
|
Preference number: 6 (lower is better) Translates to: PGSAQHTKASTL*FPPLACLHMRA Trigger: TGCTCTCATATGGAGACAGGCAAGAGGTGGAAATCAGAGGGTGCTCGCTTTGGTGTGTTGAGCTGATCCGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000314700.5 ENST00000376344.8 |
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| CDS GCA 72 bp | ACACACCAAAGCGAGCACCCTCTGATTTCCACCTCTTaGCTGTCTCCATATGAGAGCATTTCTCCTTTGAGA | + |
|
Preference number: 6 (lower is better) Translates to: THQSEHPLISTS*LSPYESISPLR Trigger: TCTCAAAGGAGAAATGCTCTCATATGGAGACAGGCAAGAGGTGGAAATCAGAGGGTGCTCGCTTTGGTGTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000314700.5 ENST00000376344.8 |
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| CDS CAA 90 bp | AGGTGCATTAACTTCTGCGCACTATTCTCACTTTCTCGGACGCAGTaGAGAAAAGAGCCTCCAAACTTCTCCAGCAGAATTTTCCCGGTT | + |
|
Preference number: 6 (lower is better) Translates to: RCINFCALFSLSRTQ*RKEPPNFSSRIFPV Trigger: AACCGGGAAAATTCTGCTGGAGAAGTTTGGAGGCTCTTTTCTCAACTGCGTCCGAGAAAGTGAGAATAGTGCGCAGAAGTTAATGCACCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000314700.5 ENST00000376340.2 ENST00000376344.8 |
||
| CDS GCA 72 bp | GAAGGAAAACTTTCAACCACCAGGTGCATTAACTTCTaGGCACTATTCTCACTTTCTCGGACGCAGTTGAGA | + |
|
Preference number: 6 (lower is better) Translates to: EGKLSTTRCINF*ALFSLSRTQLR Trigger: TCTCAACTGCGTCCGAGAAAGTGAGAATAGTGCGCAGAAGTTAATGCACCTGGTGGTTGAAAGTTTTCCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000314700.5 ENST00000376340.2 ENST00000376344.8 |
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| CDS CAA 72 bp | AACTTCTGCGCACTATTCTCACTTTCTCGGACGCAGTaGAGAAAAGAGCCTCCAAACTTCTCCAGCAGAATT | + |
|
Preference number: 6 (lower is better) Translates to: NFCALFSLSRTQ*RKEPPNFSSRI Trigger: AATTCTGCTGGAGAAGTTTGGAGGCTCTTTTCTCAACTGCGTCCGAGAAAGTGAGAATAGTGCGCAGAAGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000314700.5 ENST00000376340.2 ENST00000376344.8 |
||
| CDS TCA 72 bp | CAAAATCCGGGTGCAGCCTGTGAGGGTCCAACAAAATaGTCATCATTTGTTCAAGTACACTCAAACAGAGTC | + |
|
Preference number: 6 (lower is better) Translates to: QNPGAACEGPTK*SSFVQVHSNRV Trigger: GACTCTGTTTGAGTGTACTTGAACAAATGATGATCATTTTGTTGGACCCTCACAGGCTGCACCCGGATTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000376340.2 |
||
| CDS CAA 72 bp | GTGCAGCCTGTGAGGGTCCAACAAAATGATCATCATTaGTTCAAGTACACTCAAACAGAGTCACATCTCTGT | + |
|
Preference number: 6 (lower is better) Translates to: VQPVRVQQNDHH*FKYTQTESHLC Trigger: ACAGAGATGTGACTCTGTTTGAGTGTACTTGAACAAATGATGATCATTTTGTTGGACCCTCACAGGCTGCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376340.2 |
||
| CDS CAA 90 bp | ATCCAGAAGAATGGAATTGATCTCTCCATTAGGTTTTTCACCCTTTaGTTCAATAAGCTCCAGAAGACAATCCCGGATCAGCTCAACACA | + |
|
Preference number: 6 (lower is better) Translates to: IQKNGIDLSIRFFTL*FNKLQKTIPDQLNT Trigger: TGTGTTGAGCTGATCCGGGATTGTCTTCTGGAGCTTATTGAACAAAAGGGTGAAAAACCTAATGGAGAGATCAATTCCATTCTTCTGGAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000314700.5 ENST00000376344.8 |
||
| CDS CAA 72 bp | AATGGAATTGATCTCTCCATTAGGTTTTTCACCCTTTaGTTCAATAAGCTCCAGAAGACAATCCCGGATCAG | + |
|
Preference number: 6 (lower is better) Translates to: NGIDLSIRFFTL*FNKLQKTIPDQ Trigger: CTGATCCGGGATTGTCTTCTGGAGCTTATTGAACAAAAGGGTGAAAAACCTAATGGAGAGATCAATTCCATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000314700.5 ENST00000376344.8 |
||
| CDS GCA 72 bp | CAGTTTACACTTGAGGTCAATAATATATGCAACGTATaGGATGAAACGGAATTCCTTTCATATCTTCCCTAT | + |
|
Preference number: 6 (lower is better) Translates to: QFTLEVNNICNV*DETEFLSYLPY Trigger: ATAGGGAAGATATGAAAGGAATTCCGTTTCATCGCATACGTTGCATATATTATTGACCTCAAGTGTAAACTG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000314700.5 ENST00000376344.8 |
||
| CDS GCA 72 bp | TCTTTGGATCAGTTTACACTTGAGGTCAATAATATATaGAACGTATGCGATGAAACGGAATTCCTTTCATAT | + |
|
Preference number: 6 (lower is better) Translates to: SLDQFTLEVNNI*NVCDETEFLSY Trigger: ATATGAAAGGAATTCCGTTTCATCGCATACGTTGCATATATTATTGACCTCAAGTGTAAACTGATCCAAAGA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000314700.5 ENST00000376344.8 |
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