Pregenerated sensors for C9ORF62 (Homo sapiens)
Ensembl gene IDs: ENSG00000178243Ensembl transcript IDs: ENST00000623103.1
Found 56 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | TGGTGGGCGCCCACACTGTCGCCCACAGCCCTCCTGCAGGCGCCTTaGAGCGGGTCCCTGGCAGTGGGCAGGGCTGGCCCGCCCCTGCAG | + |
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Preference number: 5 (lower is better) Translates to: WWAPTLSPTALLQAP*SGSLAVGRAGPPLQ Trigger: CTGCAGGGGCGGGCCAGCCCTGCCCACTGCCAGGGACCCGCTCCAAGGCGCCTGCAGGAGGGCTGTGGGCGACAGTGTGGGCGCCCACCA 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000623103.1 |
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| CDS GCA 90 bp | CAGCCCAGGACTGGGCGTCCGGCCGTTCTGTCCACGCTGCAGCCCTaGTGTCCGCTAGATGGCGCTGCGTCATGCCCGTGGCGGGCCTGT | + |
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Preference number: 5 (lower is better) Translates to: QPRTGRPAVLSTLQP*CPLDGAASCPWRAC Trigger: ACAGGCCCGCCACGGGCATGACGCAGCGCCATCTAGCGGACAGCAGGGCTGCAGCGTGGACAGAACGGCCGGACGCCCAGTCCTGGGCTG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000623103.1 |
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| CDS CCA 90 bp | CACTGTCGCCCACAGCCCTCCTGCAGGCGCCTTGGAGCGGGTCCCTaGCAGTGGGCAGGGCTGGCCCGCCCCTGCAGAGTGAAGGATAGC | + |
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Preference number: 5 (lower is better) Translates to: HCRPQPSCRRLGAGP*QWAGLARPCRVKDS Trigger: GCTATCCTTCACTCTGCAGGGGCGGGCCAGCCCTGCCCACTGCCAGGGACCCGCTCCAAGGCGCCTGCAGGAGGGCTGTGGGCGACAGTG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000623103.1 |
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| CDS CCA 90 bp | GCCCTCTTGCCCTGTGAGGCTGTTCCTCAGCCGCCAGCCCAGGACTaGGCGTCCGGCCGTTCTGTCCACGCTGCAGCCCTGCTGTCCGCT | + |
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Preference number: 5 (lower is better) Translates to: ALLPCEAVPQPPAQD*ASGRSVHAAALLSA Trigger: AGCGGACAGCAGGGCTGCAGCGTGGACAGAACGGCCGGACGCCCAGTCCTGGGCTGGCGGCTGAGGAACAGCCTCACAGGGCAAGAGGGC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000623103.1 |
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| CDS GCA 90 bp | CTGTCCACGCTGCAGCCCTGCTGTCCGCTAGATGGCGCTGCGTCATaGCCGTGGCGGGCCTGTCTGGAACCCAGGAAGGCCTGGCGGAGT | + |
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Preference number: 5 (lower is better) Translates to: LSTLQPCCPLDGAAS*PWRACLEPRKAWRS Trigger: ACTCCGCCAGGCCTTCCTGGGTTCCAGACAGGCCCGCCACGGGCATGACGCAGCGCCATCTAGCGGACAGCAGGGCTGCAGCGTGGACAG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000623103.1 |
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| CDS CCA 90 bp | ACGCTGCAGCCCTGCTGTCCGCTAGATGGCGCTGCGTCATGCCCGTaGCGGGCCTGTCTGGAACCCAGGAAGGCCTGGCGGAGTTCCAGG | + |
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Preference number: 5 (lower is better) Translates to: TLQPCCPLDGAASCP*RACLEPRKAWRSSR Trigger: CCTGGAACTCCGCCAGGCCTTCCTGGGTTCCAGACAGGCCCGCCACGGGCATGACGCAGCGCCATCTAGCGGACAGCAGGGCTGCAGCGT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000623103.1 |
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| CDS CCA 90 bp | AGCGCACCAGCTTCGTGCACAGACCATGACAGGCCCTCCTGCTGGTaGGCGCCCACACTGTCGCCCACAGCCCTCCTGCAGGCGCCTTGG | + |
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Preference number: 5 (lower is better) Translates to: SAPASCTDHDRPSCW*APTLSPTALLQAPW Trigger: CCAAGGCGCCTGCAGGAGGGCTGTGGGCGACAGTGTGGGCGCCCACCAGCAGGAGGGCCTGTCATGGTCTGTGCACGAAGCTGGTGCGCT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000623103.1 |
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| CDS CCA 90 bp | GACAGCGCACCAGCTTCGTGCACAGACCATGACAGGCCCTCCTGCTaGTGGGCGCCCACACTGTCGCCCACAGCCCTCCTGCAGGCGCCT | + |
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Preference number: 5 (lower is better) Translates to: DSAPASCTDHDRPSC*WAPTLSPTALLQAP Trigger: AGGCGCCTGCAGGAGGGCTGTGGGCGACAGTGTGGGCGCCCACCAGCAGGAGGGCCTGTCATGGTCTGTGCACGAAGCTGGTGCGCTGTC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000623103.1 |
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| CDS GCA 90 bp | GAAGACAGCGCACCAGCTTCGTGCACAGACCATGACAGGCCCTCCTaGTGGTGGGCGCCCACACTGTCGCCCACAGCCCTCCTGCAGGCG | + |
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Preference number: 5 (lower is better) Translates to: EDSAPASCTDHDRPS*WWAPTLSPTALLQA Trigger: CGCCTGCAGGAGGGCTGTGGGCGACAGTGTGGGCGCCCACCAGCAGGAGGGCCTGTCATGGTCTGTGCACGAAGCTGGTGCGCTGTCTTC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000623103.1 |
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| CDS TCA 90 bp | GAGCGGGTCCCTGGCAGTGGGCAGGGCTGGCCCGCCCCTGCAGAGTaGAGGATAGCCCGGGTTTGGGAACCATGTGTGAGGGTTGGAGAT | + |
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Preference number: 5 (lower is better) Translates to: ERVPGSGQGWPAPAE*RIARVWEPCVRVGD Trigger: ATCTCCAACCCTCACACATGGTTCCCAAACCCGGGCTATCCTTCACTCTGCAGGGGCGGGCCAGCCCTGCCCACTGCCAGGGACCCGCTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000623103.1 |
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| CDS TCA 90 bp | GCGAGTTCCTGGAGAAGACAGCGCACCAGCTTCGTGCACAGACCATaGCAGGCCCTCCTGCTGGTGGGCGCCCACACTGTCGCCCACAGC | + |
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Preference number: 5 (lower is better) Translates to: ASSWRRQRTSFVHRP*QALLLVGAHTVAHS Trigger: GCTGTGGGCGACAGTGTGGGCGCCCACCAGCAGGAGGGCCTGTCATGGTCTGTGCACGAAGCTGGTGCGCTGTCTTCTCCAGGAACTCGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000623103.1 |
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| CDS GCA 90 bp | GGAGCGAAGGTGCGAGTTCCTGGAGAAGACAGCGCACCAGCTTCGTaGACAGACCATGACAGGCCCTCCTGCTGGTGGGCGCCCACACTG | + |
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Preference number: 5 (lower is better) Translates to: GAKVRVPGEDSAPAS*TDHDRPSCWWAPTL Trigger: CAGTGTGGGCGCCCACCAGCAGGAGGGCCTGTCATGGTCTGTGCACGAAGCTGGTGCGCTGTCTTCTCCAGGAACTCGCACCTTCGCTCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000623103.1 |
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| CDS GCA 90 bp | TCCAAGCCCAGTTGCTGGCTGTGTGGTTGGCGCCGAAAGCTGGGGTaGGCTGTGTTCTCAGGGGTGTCGGCACTGCTGCAGGCACACCTG | + |
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Preference number: 5 (lower is better) Translates to: SKPSCWLCGWRRKLG*AVFSGVSALLQAHL Trigger: CAGGTGTGCCTGCAGCAGTGCCGACACCCCTGAGAACACAGCGCACCCCAGCTTTCGGCGCCAACCACACAGCCAGCAACTGGGCTTGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000623103.1 |
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| CDS CCA 90 bp | AAGCTTCCAAGCCCAGTTGCTGGCTGTGTGGTTGGCGCCGAAAGCTaGGGTGCGCTGTGTTCTCAGGGGTGTCGGCACTGCTGCAGGCAC | + |
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Preference number: 5 (lower is better) Translates to: KLPSPVAGCVVGAES*GALCSQGCRHCCRH Trigger: GTGCCTGCAGCAGTGCCGACACCCCTGAGAACACAGCGCACCCCAGCTTTCGGCGCCAACCACACAGCCAGCAACTGGGCTTGGAAGCTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000623103.1 |
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| CDS CCA 90 bp | GTCGACCTCAGGGAAGCTTCCAAGCCCAGTTGCTGGCTGTGTGGTTaGCGCCGAAAGCTGGGGTGCGCTGTGTTCTCAGGGGTGTCGGCA | + |
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Preference number: 5 (lower is better) Translates to: VDLREASKPSCWLCG*RRKLGCAVFSGVSA Trigger: TGCCGACACCCCTGAGAACACAGCGCACCCCAGCTTTCGGCGCCAACCACACAGCCAGCAACTGGGCTTGGAAGCTTCCCTGAGGTCGAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000623103.1 |
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| CDS CCA 90 bp | CAGCGTCGACCTCAGGGAAGCTTCCAAGCCCAGTTGCTGGCTGTGTaGTTGGCGCCGAAAGCTGGGGTGCGCTGTGTTCTCAGGGGTGTC | + |
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Preference number: 5 (lower is better) Translates to: QRRPQGSFQAQLLAV*LAPKAGVRCVLRGV Trigger: GACACCCCTGAGAACACAGCGCACCCCAGCTTTCGGCGCCAACCACACAGCCAGCAACTGGGCTTGGAAGCTTCCCTGAGGTCGACGCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000623103.1 |
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| CDS GCA 90 bp | CCATTTCCAGGCAGCGTCGACCTCAGGGAAGCTTCCAAGCCCAGTTaGTGGCTGTGTGGTTGGCGCCGAAAGCTGGGGTGCGCTGTGTTC | + |
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Preference number: 5 (lower is better) Translates to: PFPGSVDLREASKPS*WLCGWRRKLGCAVF Trigger: GAACACAGCGCACCCCAGCTTTCGGCGCCAACCACACAGCCAGCAACTGGGCTTGGAAGCTTCCCTGAGGTCGACGCTGCCTGGAAATGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000623103.1 |
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| CDS CCA 90 bp | TTTCCAGGCAGCGTCGACCTCAGGGAAGCTTCCAAGCCCAGTTGCTaGCTGTGTGGTTGGCGCCGAAAGCTGGGGTGCGCTGTGTTCTCA | + |
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Preference number: 5 (lower is better) Translates to: FPGSVDLREASKPSC*LCGWRRKLGCAVFS Trigger: TGAGAACACAGCGCACCCCAGCTTTCGGCGCCAACCACACAGCCAGCAACTGGGCTTGGAAGCTTCCCTGAGGTCGACGCTGCCTGGAAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000623103.1 |
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| CDS TCA 90 bp | GCAGCTCGGAACAGAGCCAGCAGGCTCGACTCCATGCATGCTGTTTaGTCTGCAAAAAGTGGAGAAGGAGCAGGCGCGGAGCGGGTAGAG | + |
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Preference number: 5 (lower is better) Translates to: AARNRASRLDSMHAV*SAKSGEGAGAERVE Trigger: CTCTACCCGCTCCGCGCCTGCTCCTTCTCCACTTTTTGCAGATCAAACAGCATGCATGGAGTCGAGCCTGCTGGCTCTGTTCCGAGCTGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000623103.1 |
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| CDS GCA 90 bp | TCGGAACAGAGCCAGCAGGCTCGACTCCATGCATGCTGTTTGATCTaGAAAAAGTGGAGAAGGAGCAGGCGCGGAGCGGGTAGAGAGGGA | + |
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Preference number: 5 (lower is better) Translates to: SEQSQQARLHACCLI*KKWRRSRRGAGREG Trigger: TCCCTCTCTACCCGCTCCGCGCCTGCTCCTTCTCCACTTTTTGCAGATCAAACAGCATGCATGGAGTCGAGCCTGCTGGCTCTGTTCCGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000623103.1 |
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| CDS GCA 90 bp | CCAAAGTGCAGCTCGGAACAGAGCCAGCAGGCTCGACTCCATGCATaGTGTTTGATCTGCAAAAAGTGGAGAAGGAGCAGGCGCGGAGCG | + |
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Preference number: 5 (lower is better) Translates to: PKCSSEQSQQARLHA*CLICKKWRRSRRGA Trigger: CGCTCCGCGCCTGCTCCTTCTCCACTTTTTGCAGATCAAACAGCATGCATGGAGTCGAGCCTGCTGGCTCTGTTCCGAGCTGCACTTTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000623103.1 |
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| CDS GCA 90 bp | TCCTTTGCTTTTCTTGAGGTTCTTATGCCGGAAAGATGCAGGTGTTaGCTGCCCTCTTGCCCTGTGAGGCTGTTCCTCAGCCGCCAGCCC | + |
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Preference number: 5 (lower is better) Translates to: SFAFLEVLMPERCRC*LPSCPVRLFLSRQP Trigger: GGGCTGGCGGCTGAGGAACAGCCTCACAGGGCAAGAGGGCAGGCAACACCTGCATCTTTCCGGCATAAGAACCTCAAGAAAAGCAAAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000623103.1 |
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| CDS GCA 90 bp | ATGCCCAAAGTGCAGCTCGGAACAGAGCCAGCAGGCTCGACTCCATaGATGCTGTTTGATCTGCAAAAAGTGGAGAAGGAGCAGGCGCGG | + |
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Preference number: 5 (lower is better) Translates to: MPKVQLGTEPAGSTP*MLFDLQKVEKEQAR Trigger: CCGCGCCTGCTCCTTCTCCACTTTTTGCAGATCAAACAGCATGCATGGAGTCGAGCCTGCTGGCTCTGTTCCGAGCTGCACTTTGGGCAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000623103.1 |
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| CDS CCA 90 bp | ATGTGCAGACCCTCTAGCCTGAGAAGCCCAGGTCTTCCAGGCAGATaGTTGTGTGAGTTTCTCTCTCCCAGGACCAGGCAGACGCAGCAT | + |
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Preference number: 5 (lower is better) Translates to: MCRPSSLRSPGLPGR*LCEFLSPRTRQTQH Trigger: ATGCTGCGTCTGCCTGGTCCTGGGAGAGAGAAACTCACACAACCATCTGCCTGGAAGACCTGGGCTTCTCAGGCTAGAGGGTCTGCACAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000623103.1 |
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| CDS CCA 90 bp | CACTGGTCCTCACAGGCTCAAACTAATGTCCACCATGCAGGGTGGTaGCCCTCCCTCTGGAGCTGCTCAGACATTCACATGTGTGTGCAC | + |
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Preference number: 5 (lower is better) Translates to: HWSSQAQTNVHHAGW*PSLWSCSDIHMCVH Trigger: GTGCACACACATGTGAATGTCTGAGCAGCTCCAGAGGGAGGGCCACCACCCTGCATGGTGGACATTAGTTTGAGCCTGTGAGGACCAGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000623103.1 |
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| CDS CCA 90 bp | GGACACTGGTCCTCACAGGCTCAAACTAATGTCCACCATGCAGGGTaGTGGCCCTCCCTCTGGAGCTGCTCAGACATTCACATGTGTGTG | + |
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Preference number: 5 (lower is better) Translates to: GHWSSQAQTNVHHAG*WPSLWSCSDIHMCV Trigger: CACACACATGTGAATGTCTGAGCAGCTCCAGAGGGAGGGCCACCACCCTGCATGGTGGACATTAGTTTGAGCCTGTGAGGACCAGTGTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000623103.1 |
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| CDS TCA 90 bp | CCCATTGGGGCGGTGGCGGCTCCCTTAAACTTTCAGCGACTGCCATaGGAACAGAGATTTCGGTGGCTCCAAAGAACACAGGCTTATATT | + |
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Preference number: 5 (lower is better) Translates to: PIGAVAAPLNFQRLP*EQRFRWLQRTQAYI Trigger: AATATAAGCCTGTGTTCTTTGGAGCCACCGAAATCTCTGTTCTCATGGCAGTCGCTGAAAGTTTAAGGGAGCCGCCACCGCCCCAATGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000623103.1 |
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| CDS GCA 90 bp | GGCTTATATTCCTTTGCTTTTCTTGAGGTTCTTATGCCGGAAAGATaGAGGTGTTGCCTGCCCTCTTGCCCTGTGAGGCTGTTCCTCAGC | + |
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Preference number: 5 (lower is better) Translates to: GLYSFAFLEVLMPER*RCCLPSCPVRLFLS Trigger: GCTGAGGAACAGCCTCACAGGGCAAGAGGGCAGGCAACACCTGCATCTTTCCGGCATAAGAACCTCAAGAAAAGCAAAGGAATATAAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000623103.1 |
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| CDS CAA 90 bp | CTGGTGGGCGCCCACACTGTCGCCCACAGCCCTCCTGCAGGCGCCTaGGAGCGGGTCCCTGGCAGTGGGCAGGGCTGGCCCGCCCCTGCA | + |
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Preference number: 6 (lower is better) Translates to: LVGAHTVAHSPPAGA*ERVPGSGQGWPAPA Trigger: TGCAGGGGCGGGCCAGCCCTGCCCACTGCCAGGGACCCGCTCCAAGGCGCCTGCAGGAGGGCTGTGGGCGACAGTGTGGGCGCCCACCAG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000623103.1 |
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| CDS GCA 72 bp | GCTGGTGGGCGCCCACACTGTCGCCCACAGCCCTCCTaGAGGCGCCTTGGAGCGGGTCCCTGGCAGTGGGCA | + |
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Preference number: 6 (lower is better) Translates to: AGGRPHCRPQPS*RRLGAGPWQWA Trigger: TGCCCACTGCCAGGGACCCGCTCCAAGGCGCCTGCAGGAGGGCTGTGGGCGACAGTGTGGGCGCCCACCAGC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000623103.1 |
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| CDS GCA 72 bp | CTGCAGCCCTGCTGTCCGCTAGATGGCGCTGCGTCATaGCCGTGGCGGGCCTGTCTGGAACCCAGGAAGGCC | + |
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Preference number: 6 (lower is better) Translates to: LQPCCPLDGAAS*PWRACLEPRKA Trigger: GGCCTTCCTGGGTTCCAGACAGGCCCGCCACGGGCATGACGCAGCGCCATCTAGCGGACAGCAGGGCTGCAG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000623103.1 |
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| CDS GCA 72 bp | ACTGGGCGTCCGGCCGTTCTGTCCACGCTGCAGCCCTaGTGTCCGCTAGATGGCGCTGCGTCATGCCCGTGG | + |
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Preference number: 6 (lower is better) Translates to: TGRPAVLSTLQP*CPLDGAASCPW Trigger: CCACGGGCATGACGCAGCGCCATCTAGCGGACAGCAGGGCTGCAGCGTGGACAGAACGGCCGGACGCCCAGT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000623103.1 |
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| CDS GCA 72 bp | GCACCAGCTTCGTGCACAGACCATGACAGGCCCTCCTaGTGGTGGGCGCCCACACTGTCGCCCACAGCCCTC | + |
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Preference number: 6 (lower is better) Translates to: APASCTDHDRPS*WWAPTLSPTAL Trigger: GAGGGCTGTGGGCGACAGTGTGGGCGCCCACCAGCAGGAGGGCCTGTCATGGTCTGTGCACGAAGCTGGTGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000623103.1 |
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| CDS CCA 72 bp | CGTTCTGTCCACGCTGCAGCCCTGCTGTCCGCTAGATaGCGCTGCGTCATGCCCGTGGCGGGCCTGTCTGGA | + |
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Preference number: 6 (lower is better) Translates to: RSVHAAALLSAR*RCVMPVAGLSG Trigger: TCCAGACAGGCCCGCCACGGGCATGACGCAGCGCCATCTAGCGGACAGCAGGGCTGCAGCGTGGACAGAACG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000623103.1 |
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| CDS CCA 72 bp | GCTTCGTGCACAGACCATGACAGGCCCTCCTGCTGGTaGGCGCCCACACTGTCGCCCACAGCCCTCCTGCAG | + |
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Preference number: 6 (lower is better) Translates to: ASCTDHDRPSCW*APTLSPTALLQ Trigger: CTGCAGGAGGGCTGTGGGCGACAGTGTGGGCGCCCACCAGCAGGAGGGCCTGTCATGGTCTGTGCACGAAGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000623103.1 |
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| CDS CCA 72 bp | CCAGCTTCGTGCACAGACCATGACAGGCCCTCCTGCTaGTGGGCGCCCACACTGTCGCCCACAGCCCTCCTG | + |
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Preference number: 6 (lower is better) Translates to: PASCTDHDRPSC*WAPTLSPTALL Trigger: CAGGAGGGCTGTGGGCGACAGTGTGGGCGCCCACCAGCAGGAGGGCCTGTCATGGTCTGTGCACGAAGCTGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000623103.1 |
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| CDS CCA 72 bp | CCAGGAGGGTCTCTGGAGACCCAGGCGTCAGCACAGTaGCGGGGACGAGTCCCCTCCCTGTGTTGTGGTCAC | + |
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Preference number: 6 (lower is better) Translates to: PGGSLETQASAQ*RGRVPSLCCGH Trigger: GTGACCACAACACAGGGAGGGGACTCGTCCCCGCCACTGTGCTGACGCCTGGGTCTCCAGAGACCCTCCTGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000623103.1 |
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| CDS TCA 72 bp | GCGGCCACAGGAAGGACACTGAGGTCTGCCCTGGGCTaGGGCCCATGGCATCCTGTTCATCATGGGGGTGCC | + |
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Preference number: 6 (lower is better) Translates to: AATGRTLRSALG*GPWHPVHHGGA Trigger: GGCACCCCCATGATGAACAGGATGCCATGGGCCTCAGCCCAGGGCAGACCTCAGTGTCCTTCCTGTGGCCGC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000623103.1 |
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| CDS GCA 72 bp | GGCAGCGTCGACCTCAGGGAAGCTTCCAAGCCCAGTTaGTGGCTGTGTGGTTGGCGCCGAAAGCTGGGGTGC | + |
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Preference number: 6 (lower is better) Translates to: GSVDLREASKPS*WLCGWRRKLGC Trigger: GCACCCCAGCTTTCGGCGCCAACCACACAGCCAGCAACTGGGCTTGGAAGCTTCCCTGAGGTCGACGCTGCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000623103.1 |
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| CDS CAA 90 bp | CGTCGACCTCAGGGAAGCTTCCAAGCCCAGTTGCTGGCTGTGTGGTaGGCGCCGAAAGCTGGGGTGCGCTGTGTTCTCAGGGGTGTCGGC | + |
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Preference number: 6 (lower is better) Translates to: RRPQGSFQAQLLAVW*APKAGVRCVLRGVG Trigger: GCCGACACCCCTGAGAACACAGCGCACCCCAGCTTTCGGCGCCAACCACACAGCCAGCAACTGGGCTTGGAAGCTTCCCTGAGGTCGACG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000623103.1 |
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| CDS GCA 72 bp | AGCTGGGGTGCGCTGTGTTCTCAGGGGTGTCGGCACTaGTGCAGGCACACCTGGGACCTGCTCTTGAAGCCA | + |
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Preference number: 6 (lower is better) Translates to: SWGALCSQGCRH*CRHTWDLLLKP Trigger: TGGCTTCAAGAGCAGGTCCCAGGTGTGCCTGCAGCAGTGCCGACACCCCTGAGAACACAGCGCACCCCAGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000623103.1 |
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| CDS CCA 72 bp | AGCGTCGACCTCAGGGAAGCTTCCAAGCCCAGTTGCTaGCTGTGTGGTTGGCGCCGAAAGCTGGGGTGCGCT | + |
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Preference number: 6 (lower is better) Translates to: SVDLREASKPSC*LCGWRRKLGCA Trigger: AGCGCACCCCAGCTTTCGGCGCCAACCACACAGCCAGCAACTGGGCTTGGAAGCTTCCCTGAGGTCGACGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000623103.1 |
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| CDS GCA 72 bp | CCCACAAGGAGCAAGGCAGCCCACGGATGCCCAAAGTaGAGCTCGGAACAGAGCCAGCAGGCTCGACTCCAT | + |
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Preference number: 6 (lower is better) Translates to: PTRSKAAHGCPK*SSEQSQQARLH Trigger: ATGGAGTCGAGCCTGCTGGCTCTGTTCCGAGCTGCACTTTGGGCATCCGTGGGCTGCCTTGCTCCTTGTGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000623103.1 |
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| CDS CCA 72 bp | AGGGAAGCTTCCAAGCCCAGTTGCTGGCTGTGTGGTTaGCGCCGAAAGCTGGGGTGCGCTGTGTTCTCAGGG | + |
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Preference number: 6 (lower is better) Translates to: REASKPSCWLCG*RRKLGCAVFSG Trigger: CCCTGAGAACACAGCGCACCCCAGCTTTCGGCGCCAACCACACAGCCAGCAACTGGGCTTGGAAGCTTCCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000623103.1 |
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| CDS CAA 72 bp | CAGGGAAGCTTCCAAGCCCAGTTGCTGGCTGTGTGGTaGGCGCCGAAAGCTGGGGTGCGCTGTGTTCTCAGG | + |
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Preference number: 6 (lower is better) Translates to: QGSFQAQLLAVW*APKAGVRCVLR Trigger: CCTGAGAACACAGCGCACCCCAGCTTTCGGCGCCAACCACACAGCCAGCAACTGGGCTTGGAAGCTTCCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000623103.1 |
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| CDS CAA 90 bp | TCCATTTCCAGGCAGCGTCGACCTCAGGGAAGCTTCCAAGCCCAGTaGCTGGCTGTGTGGTTGGCGCCGAAAGCTGGGGTGCGCTGTGTT | + |
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Preference number: 6 (lower is better) Translates to: SISRQRRPQGSFQAQ*LAVWLAPKAGVRCV Trigger: AACACAGCGCACCCCAGCTTTCGGCGCCAACCACACAGCCAGCAACTGGGCTTGGAAGCTTCCCTGAGGTCGACGCTGCCTGGAAATGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000623103.1 |
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| CDS CAA 90 bp | TGCAGCTCGGAACAGAGCCAGCAGGCTCGACTCCATGCATGCTGTTaGATCTGCAAAAAGTGGAGAAGGAGCAGGCGCGGAGCGGGTAGA | + |
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Preference number: 6 (lower is better) Translates to: CSSEQSQQARLHACC*ICKKWRRSRRGAGR Trigger: TCTACCCGCTCCGCGCCTGCTCCTTCTCCACTTTTTGCAGATCAAACAGCATGCATGGAGTCGAGCCTGCTGGCTCTGTTCCGAGCTGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000623103.1 |
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| CDS GCA 72 bp | AGCCAGCAGGCTCGACTCCATGCATGCTGTTTGATCTaGAAAAAGTGGAGAAGGAGCAGGCGCGGAGCGGGT | + |
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Preference number: 6 (lower is better) Translates to: SQQARLHACCLI*KKWRRSRRGAG Trigger: ACCCGCTCCGCGCCTGCTCCTTCTCCACTTTTTGCAGATCAAACAGCATGCATGGAGTCGAGCCTGCTGGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000623103.1 |
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| CDS CCA 72 bp | TCCTCACAGGCTCAAACTAATGTCCACCATGCAGGGTaGTGGCCCTCCCTCTGGAGCTGCTCAGACATTCAC | + |
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Preference number: 6 (lower is better) Translates to: SSQAQTNVHHAG*WPSLWSCSDIH Trigger: GTGAATGTCTGAGCAGCTCCAGAGGGAGGGCCACCACCCTGCATGGTGGACATTAGTTTGAGCCTGTGAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000623103.1 |
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| CDS TCA 72 bp | CAACTTGTAATGGGGGAGCAAACATGGCCCCTGGCCTaGATGCAGGCAGCAAAGTCCATTTCCAGGCAGCGT | + |
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Preference number: 6 (lower is better) Translates to: QLVMGEQTWPLA*MQAAKSISRQR Trigger: ACGCTGCCTGGAAATGGACTTTGCTGCCTGCATTCAGGCCAGGGGCCATGTTTGCTCCCCCATTACAAGTTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000623103.1 |
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| CDS CCA 72 bp | TCACAGGCTCAAACTAATGTCCACCATGCAGGGTGGTaGCCCTCCCTCTGGAGCTGCTCAGACATTCACATG | + |
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Preference number: 6 (lower is better) Translates to: SQAQTNVHHAGW*PSLWSCSDIHM Trigger: CATGTGAATGTCTGAGCAGCTCCAGAGGGAGGGCCACCACCCTGCATGGTGGACATTAGTTTGAGCCTGTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000623103.1 |
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| CDS CAA 72 bp | GAACAGAGCCAGCAGGCTCGACTCCATGCATGCTGTTaGATCTGCAAAAAGTGGAGAAGGAGCAGGCGCGGA | + |
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Preference number: 6 (lower is better) Translates to: EQSQQARLHACC*ICKKWRRSRRG Trigger: TCCGCGCCTGCTCCTTCTCCACTTTTTGCAGATCAAACAGCATGCATGGAGTCGAGCCTGCTGGCTCTGTTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000623103.1 |
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| CDS TCA 72 bp | GCGGTGGCGGCTCCCTTAAACTTTCAGCGACTGCCATaGGAACAGAGATTTCGGTGGCTCCAAAGAACACAG | + |
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Preference number: 6 (lower is better) Translates to: AVAAPLNFQRLP*EQRFRWLQRTQ Trigger: CTGTGTTCTTTGGAGCCACCGAAATCTCTGTTCTCATGGCAGTCGCTGAAAGTTTAAGGGAGCCGCCACCGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000623103.1 |
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| CDS GCA 72 bp | TTTCTTGAGGTTCTTATGCCGGAAAGATGCAGGTGTTaGCTGCCCTCTTGCCCTGTGAGGCTGTTCCTCAGC | + |
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Preference number: 6 (lower is better) Translates to: FLEVLMPERCRC*LPSCPVRLFLS Trigger: GCTGAGGAACAGCCTCACAGGGCAAGAGGGCAGGCAACACCTGCATCTTTCCGGCATAAGAACCTCAAGAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000623103.1 |
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| CDS GCA 72 bp | AGCTCGGAACAGAGCCAGCAGGCTCGACTCCATGCATaGTGTTTGATCTGCAAAAAGTGGAGAAGGAGCAGG | + |
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Preference number: 6 (lower is better) Translates to: SSEQSQQARLHA*CLICKKWRRSR Trigger: CCTGCTCCTTCTCCACTTTTTGCAGATCAAACAGCATGCATGGAGTCGAGCCTGCTGGCTCTGTTCCGAGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000623103.1 |
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| CDS GCA 72 bp | GTGCAGCTCGGAACAGAGCCAGCAGGCTCGACTCCATaGATGCTGTTTGATCTGCAAAAAGTGGAGAAGGAG | + |
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Preference number: 6 (lower is better) Translates to: VQLGTEPAGSTP*MLFDLQKVEKE Trigger: CTCCTTCTCCACTTTTTGCAGATCAAACAGCATGCATGGAGTCGAGCCTGCTGGCTCTGTTCCGAGCTGCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000623103.1 |
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