Pregenerated sensors for C9ORF40 (Homo sapiens)
Ensembl gene IDs: ENSG00000135045Ensembl transcript IDs: ENST00000376854.6
Found 93 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | TCAACCCTGTCTGCACATGAGAGGAATGGAGGGAAACAGGACAGGTGTTTAAAACTCAGAACTATTAAATaGGAATCTCTCAAGAGTGAG | + |
|
Preference number: 2 (lower is better) Translates to: STLSAHERNGGKQDRCLKLRTIK*ESLKSE Trigger: CTCACTCTTGAGAGATTCTCATTTAATAGTTCTGAG...TTTTAAACACCTGTCCTGTTTCCCTCCATTCCTCTCATGTGCAGACAGGGTTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376854.6 |
||
| 3UTR-3UTR CCA 90 bp | TCAACCCTGTCTGCACATGAGAGGAATGGAGGGAAACAGGACAGGTGTTTAAAAACCAACATCAAATATTaGAAGCTTTGCAAACACGCT | + |
|
Preference number: 2 (lower is better) Translates to: STLSAHERNGGKQDRCLKTNIKY*KLCKHA Trigger: AGCGTGTTTGCAAAGCTTCCAATATTTGATGTTGGT...TTTTAAACACCTGTCCTGTTTCCCTCCATTCCTCTCATGTGCAGACAGGGTTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000376854.6 |
||
| 3UTR-3UTR GCA 90 bp | TCAACCCTGTCTGCACATGAGAGGAATGGAGGGAAACAGGACAGGTGTTTAAAAAAATATTGGAAGCTTTaGAAACACGCTACCCAAATT | + |
|
Preference number: 2 (lower is better) Translates to: STLSAHERNGGKQDRCLKKYWKL*KHATQI Trigger: AATTTGGGTAGCGTGTTTGCAAAGCTTCCAATATTT...TTTTAAACACCTGTCCTGTTTCCCTCCATTCCTCTCATGTGCAGACAGGGTTGA 41% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 1 transcripts: ENST00000376854.6 |
||
| 3UTR-3UTR TCA 90 bp | CTATTAAATGAGAATCTCTCAAGAGTGAGGCCCAGGCAAAGATTTTTAAAGTGCGATAGGAGGAATATTTaGGTTTTTCCCACCTATTTC | + |
|
Preference number: 2 (lower is better) Translates to: LLNENLSRVRPRQRFLKCDRRNI*VFPTYF Trigger: GAAATAGGTGGGAAAAACTCAAATATTCCTCCTATC...GCACTTTAAAAATCTTTGCCTGGGCCTCACTCTTGAGAGATTCTCATTTAATAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000376854.6 |
||
| 3UTR-3UTR CAA 90 bp | TCAACCCTGTCTGCACATGAGAGGAATGGAGGGAAACAGGACAGGTGTTTAAAATTTATCCATCTTCAGTaGCCCATAGTAGAGCTTAAC | + |
|
Preference number: 3 (lower is better) Translates to: STLSAHERNGGKQDRCLKFIHLQ*PIVELN Trigger: GTTAAGCTCTACTATGGGCAACTGAAGATGGATAAA...TTTTAAACACCTGTCCTGTTTCCCTCCATTCCTCTCATGTGCAGACAGGGTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376854.6 |
||
| 3UTR-3UTR CAA 90 bp | AGACCCACCTCAGAACTATTAAATGAGAATCTCTCAAGAGTGAGGCCCAGGCAAAAAGTGCTGTCAGTGTaGAAAACTACAGGTCTAAAG | + |
|
Preference number: 3 (lower is better) Translates to: RPTSELLNENLSRVRPRQKVLSV*KTTGLK Trigger: CTTTAGACCTGTAGTTTTCAACACTGACAGCACTTT...TTGCCTGGGCCTCACTCTTGAGAGATTCTCATTTAATAGTTCTGAGGTGGGTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000376854.6 |
||
| 3UTR TCA 72 bp | ATAGTTATATCCAAGACCCACCTCAGAACTATTAAATaGGAATCTCTCAAGAGTGAGGCCCAGGCAAAGATT | + |
|
Preference number: 3 (lower is better) Translates to: IVISKTHLRTIK*ESLKSEAQAKI Trigger: AATCTTTGCCTGGGCCTCACTCTTGAGAGATTCTCATTTAATAGTTCTGAGGTGGGTCTTGGATATAACTAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376854.6 |
||
| CDS-3UTR CCA 90 bp | TCAACCCTGTCTGCACATGAGAGGAATGGAGGGAAACAGGACAGGTGTTTAAAACACGCCGCTTGGCCATaGGCCCAGAGGCTCGGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: STLSAHERNGGKQDRCLKHAAWP*AQRLGR Trigger: CCGCCCGAGCCTCTGGGCCCATGGCCAAGCGGCGTG...TTTTAAACACCTGTCCTGTTTCCCTCCATTCCTCTCATGTGCAGACAGGGTTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376854.6 |
||
| CDS-3UTR CCA 90 bp | AGACCCACCTCAGAACTATTAAATGAGAATCTCTCAAGAGTGAGGCCCAGGCAACGGCCGCACGCCGCTTaGCCATGGGCCCAGAGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: RPTSELLNENLSRVRPRQRPHAA*PWAQRL Trigger: GAGCCTCTGGGCCCATGGCCAAGCGGCGTGCGGCCG...TTGCCTGGGCCTCACTCTTGAGAGATTCTCATTTAATAGTTCTGAGGTGGGTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376854.6 |
||
| CDS-3UTR GCA 90 bp | CCATTAGTCTACTGGTTCTCAACCCTGTCTGCACATGAGAGGAATGGAGGGAAATCGCCGCCGCCGAGATaGGGCCCGGACGTTGAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: PLVYWFSTLSAHERNGGKSPPPR*GPDVEK Trigger: CTTCTCAACGTCCGGGCCGCATCTCGGCGGCGGCGA...TTTCCCTCCATTCCTCTCATGTGCAGACAGGGTTGAGAACCAGTAGACTAATGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376854.6 |
||
| CDS-3UTR CCA 90 bp | TCTACTGGTTCTCAACCCTGTCTGCACATGAGAGGAATGGAGGGAAACAGGACACTTTCGGTGCTGCTCTaGGACGCCGAGGAGCTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: STGSQPCLHMRGMEGNRTLSVLL*DAEELP Trigger: GGGCAGCTCCTCGGCGTCCCAGAGCAGCACCGAAAG...TGTCCTGTTTCCCTCCATTCCTCTCATGTGCAGACAGGGTTGAGAACCAGTAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376854.6 |
||
| CDS-3UTR CCA 90 bp | CCATTAGTCTACTGGTTCTCAACCCTGTCTGCACATGAGAGGAATGGAGGGAAATGGTCCTCACGCTCCTaGCCGCTCGGGGCGCTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: PLVYWFSTLSAHERNGGKWSSRS*PLGALL Trigger: CAACAGCGCCCCGAGCGGCCAGGAGCGTGAGGACCA...TTTCCCTCCATTCCTCTCATGTGCAGACAGGGTTGAGAACCAGTAGACTAATGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376854.6 |
||
| CDS-3UTR GCA 90 bp | AGACCCACCTCAGAACTATTAAATGAGAATCTCTCAAGAGTGAGGCCCAGGCAACGCTGTCACGGCGCTTaGTGGGCGAAGCCGAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: RPTSELLNENLSRVRPRQRCHGA*WAKPRA Trigger: AGCCCTCGGCTTCGCCCAGCAAGCGCCGTGACAGCG...TTGCCTGGGCCTCACTCTTGAGAGATTCTCATTTAATAGTTCTGAGGTGGGTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376854.6 |
||
| CDS-3UTR GCA 90 bp | AGACCCACCTCAGAACTATTAAATGAGAATCTCTCAAGAGTGAGGCCCAGGCAACGAAGCCGAGGGCTCTaGCATGGTCCCTGCGTCGAT | + |
|
Preference number: 4 (lower is better) Translates to: RPTSELLNENLSRVRPRQRSRGL*HGPCVD Trigger: ATCGACGCAGGGACCATGGCAGAGCCCTCGGCTTCG...TTGCCTGGGCCTCACTCTTGAGAGATTCTCATTTAATAGTTCTGAGGTGGGTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376854.6 |
||
| CDS-3UTR GCA 90 bp | AAAACAATAGCTTTTACAACAATCCCGCCCATCTTAAGTTTGCATAGATGTTCAGGGACGCCGAGGAGCTaGCCAGCATGCGCGACCCCG | + |
|
Preference number: 4 (lower is better) Translates to: KTIAFTTIPPILSLHRCSGTPRS*PACATP Trigger: CGGGGTCGCGCATGCTGGGCAGCTCCTCGGCGTCCC...TGAACATCTATGCAAACTTAAGATGGGCGGGATTGTTGTAAAAGCTATTGTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000376854.6 |
||
| CDS-3UTR TCA 90 bp | TCCCTTAAGAATACGAGAATTCACTTAGAGACATCTCCTCAAATCAGCCAATCCGCGAAGAGCGAGGACTaGGCGCGTGAGAGAGGGACA | + |
|
Preference number: 4 (lower is better) Translates to: SLKNTRIHLETSPQISQSAKSED*ARERGT Trigger: TGTCCCTCTCTCACGCGCTCAGTCCTCGCTCTTCGC...GGATTGGCTGATTTGAGGAGATGTCTCTAAGTGAATTCTCGTATTCTTAAGGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376854.6 |
||
| CDS-3UTR GCA 90 bp | TCAACCCTGTCTGCACATGAGAGGAATGGAGGGAAACAGGACAGGTGTTTAAAACTCTGCCATGGTCCCTaGGTCGATTTTGCGCTTTCG | + |
|
Preference number: 4 (lower is better) Translates to: STLSAHERNGGKQDRCLKLCHGP*VDFALS Trigger: CGAAAGCGCAAAATCGACGCAGGGACCATGGCAGAG...TTTTAAACACCTGTCCTGTTTCCCTCCATTCCTCTCATGTGCAGACAGGGTTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000376854.6 |
||
| CDS-3UTR CCA 90 bp | CTATTAAATGAGAATCTCTCAAGAGTGAGGCCCAGGCAAAGATTTTTAAAGTGCCGCTTCCAAGGCACGTaGAACGTCACCGGCTCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: LLNENLSRVRPRQRFLKCRFQGT*NVTGSA Trigger: GGCCGAGCCGGTGACGTTCCACGTGCCTTGGAAGCG...GCACTTTAAAAATCTTTGCCTGGGCCTCACTCTTGAGAGATTCTCATTTAATAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000376854.6 |
||
| CDS-3UTR GCA 90 bp | ATACTTCCCCTACAACTGTACTCTATCCTTGACAAATCCTTATTAAGAGGTTCAGCGGAGATTCGAACCTaGGCACAACGTGCGCGCGCG | + |
|
Preference number: 4 (lower is better) Translates to: ILPLQLYSILDKSLLRGSAEIRT*AQRARA Trigger: CGCGCGCGCACGTTGTGCGCAGGTTCGAATCTCCGC...TGAACCTCTTAATAAGGATTTGTCAAGGATAGAGTACAGTTGTAGGGGAAGTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376854.6 |
||
| CDS-3UTR GCA 90 bp | AAAACAATAGCTTTTACAACAATCCCGCCCATCTTAAGTTTGCATAGATGTTCAGGCGGTGGCGGCGGCTaGTCAGCGAAGTCGCAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: KTIAFTTIPPILSLHRCSGGGGG*SAKSQS Trigger: GCTTTGCGACTTCGCTGAGCAGCCGCCGCCACCGCC...TGAACATCTATGCAAACTTAAGATGGGCGGGATTGTTGTAAAAGCTATTGTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000376854.6 |
||
| CDS-3UTR GCA 90 bp | TCAACCCTGTCTGCACATGAGAGGAATGGAGGGAAACAGGACAGGTGTTTAAAACCTGCCCTGAAGTGTTaGTTCTGTCAGGGTGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: STLSAHERNGGKQDRCLKPALKC*FCQGVF Trigger: GAAGACACCCTGACAGAAGCAACACTTCAGGGCAGG...TTTTAAACACCTGTCCTGTTTCCCTCCATTCCTCTCATGTGCAGACAGGGTTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376854.6 |
||
| CDS-3UTR CCA 90 bp | ATACTTCCCCTACAACTGTACTCTATCCTTGACAAATCCTTATTAAGAGGTTCAGATCCAGAGAGGCGGTaGCGGCGGCTGCTCAGCGAA | + |
|
Preference number: 4 (lower is better) Translates to: ILPLQLYSILDKSLLRGSDPERR*RRLLSE Trigger: TTCGCTGAGCAGCCGCCGCCACCGCCTCTCTGGATC...TGAACCTCTTAATAAGGATTTGTCAAGGATAGAGTACAGTTGTAGGGGAAGTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376854.6 |
||
| CDS-3UTR TCA 90 bp | AAAACAATAGCTTTTACAACAATCCCGCCCATCTTAAGTTTGCATAGATGTTCAATGCGGCCCGGACGTTaGGAAGCAACCGCGAAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: KTIAFTTIPPILSLHRCSMRPGR*EATAKR Trigger: CCGCTTCGCGGTTGCTTCTCAACGTCCGGGCCGCAT...TGAACATCTATGCAAACTTAAGATGGGCGGGATTGTTGTAAAAGCTATTGTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000376854.6 |
||
| CDS-3UTR GCA 90 bp | ATACTTCCCCTACAACTGTACTCTATCCTTGACAAATCCTTATTAAGAGGTTCATTGCGCTTTCGGTGCTaGTCTGGGACGCCGAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: ILPLQLYSILDKSLLRGSLRFRC*SGTPRS Trigger: GCTCCTCGGCGTCCCAGAGCAGCACCGAAAGCGCAA...TGAACCTCTTAATAAGGATTTGTCAAGGATAGAGTACAGTTGTAGGGGAAGTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376854.6 |
||
| CDS-3UTR GCA 90 bp | TCCCTTAAGAATACGAGAATTCACTTAGAGACATCTCCTCAAATCAGCCAATCCATTTTGCGCTTTCGGTaGTGCTCTGGGACGCCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SLKNTRIHLETSPQISQSILRFR*CSGTPR Trigger: CCTCGGCGTCCCAGAGCAGCACCGAAAGCGCAAAAT...GGATTGGCTGATTTGAGGAGATGTCTCTAAGTGAATTCTCGTATTCTTAAGGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376854.6 |
||
| CDS-3UTR GCA 90 bp | AGACCCACCTCAGAACTATTAAATGAGAATCTCTCAAGAGTGAGGCCCAGGCAAATCAGCCAATCCCACTaGTTCGGCTCCTTACATCAG | + |
|
Preference number: 4 (lower is better) Translates to: RPTSELLNENLSRVRPRQISQSH*FGSLHQ Trigger: CTGATGTAAGGAGCCGAAGCAGTGGGATTGGCTGAT...TTGCCTGGGCCTCACTCTTGAGAGATTCTCATTTAATAGTTCTGAGGTGGGTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376854.6 |
||
| CDS-3UTR CCA 90 bp | CTATTAAATGAGAATCTCTCAAGAGTGAGGCCCAGGCAAAGATTTTTAAAGTGCCCGAGGGCTCTGCCATaGTCCCTGCGTCGATTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: LLNENLSRVRPRQRFLKCPRALP*SLRRFC Trigger: GCAAAATCGACGCAGGGACCATGGCAGAGCCCTCGG...GCACTTTAAAAATCTTTGCCTGGGCCTCACTCTTGAGAGATTCTCATTTAATAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000376854.6 |
||
| CDS-3UTR TCA 90 bp | TCTACTGGTTCTCAACCCTGTCTGCACATGAGAGGAATGGAGGGAAACAGGACAACTTTGAACCATGTCTaGCCACAATGCAATACAGTT | + |
|
Preference number: 4 (lower is better) Translates to: STGSQPCLHMRGMEGNRTTLNHV*PQCNTV Trigger: AACTGTATTGCATTGTGGTCAGACATGGTTCAAAGT...TGTCCTGTTTCCCTCCATTCCTCTCATGTGCAGACAGGGTTGAGAACCAGTAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376854.6 |
||
| CDS-3UTR TCA 90 bp | TCTACTGGTTCTCAACCCTGTCTGCACATGAGAGGAATGGAGGGAAACAGGACAACTGTACTCTATCCTTaGCAAATCCTTATTAAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: STGSQPCLHMRGMEGNRTTVLYP*QILIKR Trigger: CCTCTTAATAAGGATTTGTCAAGGATAGAGTACAGT...TGTCCTGTTTCCCTCCATTCCTCTCATGTGCAGACAGGGTTGAGAACCAGTAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376854.6 |
||
| CDS-3UTR GCA 90 bp | AAAACAATAGCTTTTACAACAATCCCGCCCATCTTAAGTTTGCATAGATGTTCATCCCTGCGTCGATTTTaGGCTTTCGGTGCTGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: KTIAFTTIPPILSLHRCSSLRRF*AFGAAL Trigger: CAGAGCAGCACCGAAAGCGCAAAATCGACGCAGGGA...TGAACATCTATGCAAACTTAAGATGGGCGGGATTGTTGTAAAAGCTATTGTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000376854.6 |
||
| CDS-3UTR CCA 90 bp | TCAACCCTGTCTGCACATGAGAGGAATGGAGGGAAACAGGACAGGTGTTTAAAATACATAGGTAGGAAGTaGCAGTACAAGACTTTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: STLSAHERNGGKQDRCLKYIGRK*QYKTLN Trigger: GTTCAAAGTCTTGTACTGCCACTTCCTACCTATGTA...TTTTAAACACCTGTCCTGTTTCCCTCCATTCCTCTCATGTGCAGACAGGGTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376854.6 |
||
| CDS-3UTR TCA 90 bp | AAAACAATAGCTTTTACAACAATCCCGCCCATCTTAAGTTTGCATAGATGTTCACCTTCATTCCTGCCCTaGAGTGTTGCTTCTGTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: KTIAFTTIPPILSLHRCSPSFLP*SVASVR Trigger: CCTGACAGAAGCAACACTTCAGGGCAGGAATGAAGG...TGAACATCTATGCAAACTTAAGATGGGCGGGATTGTTGTAAAAGCTATTGTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000376854.6 |
||
| CDS-3UTR TCA 90 bp | ATACTTCCCCTACAACTGTACTCTATCCTTGACAAATCCTTATTAAGAGGTTCAAACCCTGTCTGCACATaGGAGGAATGGAGGGAAACA | + |
|
Preference number: 4 (lower is better) Translates to: ILPLQLYSILDKSLLRGSNPVCT*EEWRET Trigger: TGTTTCCCTCCATTCCTCTCATGTGCAGACAGGGTT...TGAACCTCTTAATAAGGATTTGTCAAGGATAGAGTACAGTTGTAGGGGAAGTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376854.6 |
||
| CDS-3UTR TCA 90 bp | AGACCCACCTCAGAACTATTAAATGAGAATCTCTCAAGAGTGAGGCCCAGGCAATTTGAGGCTTGGAGATaGAAAATAACTGGCTTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: RPTSELLNENLSRVRPRQFEAWR*KITGLK Trigger: CTTTAAGCCAGTTATTTTTCATCTCCAAGCCTCAAA...TTGCCTGGGCCTCACTCTTGAGAGATTCTCATTTAATAGTTCTGAGGTGGGTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376854.6 |
||
| CDS-3UTR GCA 90 bp | AAAACAATAGCTTTTACAACAATCCCGCCCATCTTAAGTTTGCATAGATGTTCACAGCCCCTTCATTCCTaGCCTGAAGTGTTGCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: KTIAFTTIPPILSLHRCSQPLHS*PEVLLL Trigger: CAGAAGCAACACTTCAGGGCAGGAATGAAGGGGCTG...TGAACATCTATGCAAACTTAAGATGGGCGGGATTGTTGTAAAAGCTATTGTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000376854.6 |
||
| CDS-3UTR GCA 90 bp | CCATTAGTCTACTGGTTCTCAACCCTGTCTGCACATGAGAGGAATGGAGGGAAAAAATATTGGAAGCTTTaGAAACACGCTACCCAAATT | + |
|
Preference number: 4 (lower is better) Translates to: PLVYWFSTLSAHERNGGKKYWKL*KHATQI Trigger: AATTTGGGTAGCGTGTTTGCAAAGCTTCCAATATTT...TTTCCCTCCATTCCTCTCATGTGCAGACAGGGTTGAGAACCAGTAGACTAATGG 42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENST00000376854.6 |
||
| CDS-3UTR CCA 90 bp | CTATTAAATGAGAATCTCTCAAGAGTGAGGCCCAGGCAAAGATTTTTAAAGTGCCGACCATTAGTCTACTaGTTCTCAACCCTGTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LLNENLSRVRPRQRFLKCRPLVY*FSTLSA Trigger: TGCAGACAGGGTTGAGAACCAGTAGACTAATGGTCG...GCACTTTAAAAATCTTTGCCTGGGCCTCACTCTTGAGAGATTCTCATTTAATAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000376854.6 |
||
| CDS-3UTR CCA 90 bp | TCCCTTAAGAATACGAGAATTCACTTAGAGACATCTCCTCAAATCAGCCAATCCACCAACATCAAATATTaGAAGCTTTGCAAACACGCT | + |
|
Preference number: 4 (lower is better) Translates to: SLKNTRIHLETSPQISQSTNIKY*KLCKHA Trigger: AGCGTGTTTGCAAAGCTTCCAATATTTGATGTTGGT...GGATTGGCTGATTTGAGGAGATGTCTCTAAGTGAATTCTCGTATTCTTAAGGGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376854.6 |
||
| CDS-3UTR CCA 90 bp | AAAACAATAGCTTTTACAACAATCCCGCCCATCTTAAGTTTGCATAGATGTTCAGGATTCCTCCAGTACTaGAAGGTATTATACTGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: KTIAFTTIPPILSLHRCSGFLQY*KVLYCQ Trigger: TTGGCAGTATAATACCTTCCAGTACTGGAGGAATCC...TGAACATCTATGCAAACTTAAGATGGGCGGGATTGTTGTAAAAGCTATTGTTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000376854.6 |
||
| CDS-3UTR TCA 90 bp | ATACTTCCCCTACAACTGTACTCTATCCTTGACAAATCCTTATTAAGAGGTTCAGATAGGAGGAATATTTaGGTTTTTCCCACCTATTTC | + |
|
Preference number: 4 (lower is better) Translates to: ILPLQLYSILDKSLLRGSDRRNI*VFPTYF Trigger: GAAATAGGTGGGAAAAACTCAAATATTCCTCCTATC...TGAACCTCTTAATAAGGATTTGTCAAGGATAGAGTACAGTTGTAGGGGAAGTAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000376854.6 |
||
| CDS-3UTR TCA 90 bp | ATACTTCCCCTACAACTGTACTCTATCCTTGACAAATCCTTATTAAGAGGTTCACTCAGAACTATTAAATaGGAATCTCTCAAGAGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: ILPLQLYSILDKSLLRGSLRTIK*ESLKSE Trigger: CTCACTCTTGAGAGATTCTCATTTAATAGTTCTGAG...TGAACCTCTTAATAAGGATTTGTCAAGGATAGAGTACAGTTGTAGGGGAAGTAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376854.6 |
||
| CDS-3UTR GCA 90 bp | ATACTTCCCCTACAACTGTACTCTATCCTTGACAAATCCTTATTAAGAGGTTCATGGAAGGTATTATACTaGCAAAATTCTTCATTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: ILPLQLYSILDKSLLRGSWKVLY*QNSSLC Trigger: GCACAATGAAGAATTTTGGCAGTATAATACCTTCCA...TGAACCTCTTAATAAGGATTTGTCAAGGATAGAGTACAGTTGTAGGGGAAGTAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000376854.6 |
||
| CDS-3UTR GCA 90 bp | ATACTTCCCCTACAACTGTACTCTATCCTTGACAAATCCTTATTAAGAGGTTCAAACCAGTTACTCAATTaGAAAACCAACATTCTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: ILPLQLYSILDKSLLRGSNQLLN*KTNILD Trigger: ATCCAGAATGTTGGTTTTGCAATTGAGTAACTGGTT...TGAACCTCTTAATAAGGATTTGTCAAGGATAGAGTACAGTTGTAGGGGAAGTAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000376854.6 |
||
| CDS CCA 90 bp | CTGCCCAGCATGCGCGACCCCGGGCGGCCGGATCCAGAGAGGCGGTaGCGGCGGCTGCTCAGCGAAGTCGCAAAGCAGGAGCCGCTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: LPSMRDPGRPDPERR*RRLLSEVAKQEPLP Trigger: TGGAAGCGGCTCCTGCTTTGCGACTTCGCTGAGCAGCCGCCGCCACCGCCTCTCTGGATCCGGCCGCCCGGGGTCGCGCATGCTGGGCAG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376854.6 |
||
| CDS CCA 90 bp | GGCAGCGGCGGATCGCCTGTCTCCAGACCGTGGTCCTCACGCTCCTaGCCGCTCGGGGCGCTGTTGTCCCCGCTGTCACGGCGCTTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: GSGGSPVSRPWSSRS*PLGALLSPLSRRLL Trigger: CAGCAAGCGCCGTGACAGCGGGGACAACAGCGCCCCGAGCGGCCAGGAGCGTGAGGACCACGGTCTGGAGACAGGCGATCCGCCGCTGCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000376854.6 |
||
| CDS GCA 90 bp | GCGTCGATTTTGCGCTTTCGGTGCTGCTCTGGGACGCCGAGGAGCTaGCCAGCATGCGCGACCCCGGGCGGCCGGATCCAGAGAGGCGGT | + |
|
Preference number: 5 (lower is better) Translates to: ASILRFRCCSGTPRS*PACATPGGRIQRGG Trigger: ACCGCCTCTCTGGATCCGGCCGCCCGGGGTCGCGCATGCTGGGCAGCTCCTCGGCGTCCCAGAGCAGCACCGAAAGCGCAAAATCGACGC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000376854.6 |
||
| CDS GCA 90 bp | GCTCCTGGCCGCTCGGGGCGCTGTTGTCCCCGCTGTCACGGCGCTTaGTGGGCGAAGCCGAGGGCTCTGCCATGGTCCCTGCGTCGATTT | + |
|
Preference number: 5 (lower is better) Translates to: APGRSGRCCPRCHGA*WAKPRALPWSLRRF Trigger: AAATCGACGCAGGGACCATGGCAGAGCCCTCGGCTTCGCCCAGCAAGCGCCGTGACAGCGGGGACAACAGCGCCCCGAGCGGCCAGGAGC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000376854.6 |
||
| CDS CCA 90 bp | CTCTGCCATGGTCCCTGCGTCGATTTTGCGCTTTCGGTGCTGCTCTaGGACGCCGAGGAGCTGCCCAGCATGCGCGACCCCGGGCGGCCG | + |
|
Preference number: 5 (lower is better) Translates to: LCHGPCVDFALSVLL*DAEELPSMRDPGRP Trigger: CGGCCGCCCGGGGTCGCGCATGCTGGGCAGCTCCTCGGCGTCCCAGAGCAGCACCGAAAGCGCAAAATCGACGCAGGGACCATGGCAGAG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000376854.6 |
||
| CDS GCA 90 bp | GAGGGCTCTGCCATGGTCCCTGCGTCGATTTTGCGCTTTCGGTGCTaGTCTGGGACGCCGAGGAGCTGCCCAGCATGCGCGACCCCGGGC | + |
|
Preference number: 5 (lower is better) Translates to: EGSAMVPASILRFRC*SGTPRSCPACATPG Trigger: GCCCGGGGTCGCGCATGCTGGGCAGCTCCTCGGCGTCCCAGAGCAGCACCGAAAGCGCAAAATCGACGCAGGGACCATGGCAGAGCCCTC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000376854.6 |
||
| CDS GCA 90 bp | GCCGAGGGCTCTGCCATGGTCCCTGCGTCGATTTTGCGCTTTCGGTaGTGCTCTGGGACGCCGAGGAGCTGCCCAGCATGCGCGACCCCG | + |
|
Preference number: 5 (lower is better) Translates to: AEGSAMVPASILRFR*CSGTPRSCPACATP Trigger: CGGGGTCGCGCATGCTGGGCAGCTCCTCGGCGTCCCAGAGCAGCACCGAAAGCGCAAAATCGACGCAGGGACCATGGCAGAGCCCTCGGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000376854.6 |
||
| CDS CCA 90 bp | GGCTGCTCAGCGAAGTCGCAAAGCAGGAGCCGCTTCCAAGGCACGTaGAACGTCACCGGCTCGGCCGCACGCCGCTTGGCCATGGGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: GCSAKSQSRSRFQGT*NVTGSAARRLAMGP Trigger: TGGGCCCATGGCCAAGCGGCGTGCGGCCGAGCCGGTGACGTTCCACGTGCCTTGGAAGCGGCTCCTGCTTTGCGACTTCGCTGAGCAGCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376854.6 |
||
| CDS CCA 90 bp | CCCCGCTGTCACGGCGCTTGCTGGGCGAAGCCGAGGGCTCTGCCATaGTCCCTGCGTCGATTTTGCGCTTTCGGTGCTGCTCTGGGACGC | + |
|
Preference number: 5 (lower is better) Translates to: PRCHGACWAKPRALP*SLRRFCAFGAALGR Trigger: GCGTCCCAGAGCAGCACCGAAAGCGCAAAATCGACGCAGGGACCATGGCAGAGCCCTCGGCTTCGCCCAGCAAGCGCCGTGACAGCGGGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000376854.6 |
||
| CDS GCA 90 bp | GTCACGGCGCTTGCTGGGCGAAGCCGAGGGCTCTGCCATGGTCCCTaGGTCGATTTTGCGCTTTCGGTGCTGCTCTGGGACGCCGAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: VTALAGRSRGLCHGP*VDFALSVLLWDAEE Trigger: CTCCTCGGCGTCCCAGAGCAGCACCGAAAGCGCAAAATCGACGCAGGGACCATGGCAGAGCCCTCGGCTTCGCCCAGCAAGCGCCGTGAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376854.6 |
||
| CDS GCA 90 bp | GTTGTCCCCGCTGTCACGGCGCTTGCTGGGCGAAGCCGAGGGCTCTaGCATGGTCCCTGCGTCGATTTTGCGCTTTCGGTGCTGCTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: VVPAVTALAGRSRGL*HGPCVDFALSVLLW Trigger: CCAGAGCAGCACCGAAAGCGCAAAATCGACGCAGGGACCATGGCAGAGCCCTCGGCTTCGCCCAGCAAGCGCCGTGACAGCGGGGACAAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000376854.6 |
||
| CDS-3UTR CAA 90 bp | CCATTAGTCTACTGGTTCTCAACCCTGTCTGCACATGAGAGGAATGGAGGGAAACCGCTGTCACGGCGCTaGCTGGGCGAAGCCGAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: PLVYWFSTLSAHERNGGKPLSRR*LGEAEG Trigger: GCCCTCGGCTTCGCCCAGCAAGCGCCGTGACAGCGG...TTTCCCTCCATTCCTCTCATGTGCAGACAGGGTTGAGAACCAGTAGACTAATGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376854.6 |
||
| CDS-3UTR CAA 90 bp | AGACCCACCTCAGAACTATTAAATGAGAATCTCTCAAGAGTGAGGCCCAGGCAACCGCTCGGGGCGCTGTaGTCCCCGCTGTCACGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: RPTSELLNENLSRVRPRQPLGAL*SPLSRR Trigger: GCGCCGTGACAGCGGGGACAACAGCGCCCCGAGCGG...TTGCCTGGGCCTCACTCTTGAGAGATTCTCATTTAATAGTTCTGAGGTGGGTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000376854.6 |
||
| CDS-3UTR CAA 90 bp | CTATTAAATGAGAATCTCTCAAGAGTGAGGCCCAGGCAAAGATTTTTAAAGTGCTCGGCCGCACGCCGCTaGGCCATGGGCCCAGAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: LLNENLSRVRPRQRFLKCSAARR*AMGPEA Trigger: AGCCTCTGGGCCCATGGCCAAGCGGCGTGCGGCCGA...GCACTTTAAAAATCTTTGCCTGGGCCTCACTCTTGAGAGATTCTCATTTAATAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000376854.6 |
||
| CDS-3UTR CAA 90 bp | TCCCTTAAGAATACGAGAATTCACTTAGAGACATCTCCTCAAATCAGCCAATCCGATGCGGCCCGGACGTaGAGAAGCAACCGCGAAGCG | + |
|
Preference number: 5 (lower is better) Translates to: SLKNTRIHLETSPQISQSDAART*RSNREA Trigger: CGCTTCGCGGTTGCTTCTCAACGTCCGGGCCGCATC...GGATTGGCTGATTTGAGGAGATGTCTCTAAGTGAATTCTCGTATTCTTAAGGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376854.6 |
||
| CDS-3UTR CAA 90 bp | TCAACCCTGTCTGCACATGAGAGGAATGGAGGGAAACAGGACAGGTGTTTAAAAGTCCCTGCGTCGATTTaGCGCTTTCGGTGCTGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: STLSAHERNGGKQDRCLKVPASI*RFRCCS Trigger: AGAGCAGCACCGAAAGCGCAAAATCGACGCAGGGAC...TTTTAAACACCTGTCCTGTTTCCCTCCATTCCTCTCATGTGCAGACAGGGTTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376854.6 |
||
| CDS-3UTR CAA 90 bp | CCATTAGTCTACTGGTTCTCAACCCTGTCTGCACATGAGAGGAATGGAGGGAAATCCTGCCCTGAAGTGTaGCTTCTGTCAGGGTGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: PLVYWFSTLSAHERNGGKSCPEV*LLSGCL Trigger: AAGACACCCTGACAGAAGCAACACTTCAGGGCAGGA...TTTCCCTCCATTCCTCTCATGTGCAGACAGGGTTGAGAACCAGTAGACTAATGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376854.6 |
||
| CDS-3UTR CAA 90 bp | TCTACTGGTTCTCAACCCTGTCTGCACATGAGAGGAATGGAGGGAAACAGGACAGAACCAGTTACTCAATaGCAAAACCAACATTCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: STGSQPCLHMRGMEGNRTEPVTQ*QNQHSG Trigger: TCCAGAATGTTGGTTTTGCAATTGAGTAACTGGTTC...TGTCCTGTTTCCCTCCATTCCTCTCATGTGCAGACAGGGTTGAGAACCAGTAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376854.6 |
||
| CDS CCA 90 bp | TCAATGTCTGCCAGATCAATAGGAGGCAAAGGATTCCTCCAGTACTaGAAGGTATTATACTGCCAAAATTCTTCATTGTGCTGGCGCGAT | + |
|
Preference number: 5 (lower is better) Translates to: SMSARSIGGKGFLQY*KVLYCQNSSLCWRD Trigger: ATCGCGCCAGCACAATGAAGAATTTTGGCAGTATAATACCTTCCAGTACTGGAGGAATCCTTTGCCTCCTATTGATCTGGCAGACATTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376854.6 |
||
| CDS-3UTR CAA 90 bp | ATACTTCCCCTACAACTGTACTCTATCCTTGACAAATCCTTATTAAGAGGTTCATGCCAAAATTCTTCATaGTGCTGGCGCGATGCGACC | + |
|
Preference number: 5 (lower is better) Translates to: ILPLQLYSILDKSLLRGSCQNSS*CWRDAT Trigger: GGTCGCATCGCGCCAGCACAATGAAGAATTTTGGCA...TGAACCTCTTAATAAGGATTTGTCAAGGATAGAGTACAGTTGTAGGGGAAGTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000376854.6 |
||
| CDS-3UTR CAA 90 bp | AGACCCACCTCAGAACTATTAAATGAGAATCTCTCAAGAGTGAGGCCCAGGCAACAAATATTGGAAGCTTaGCAAACACGCTACCCAAAT | + |
|
Preference number: 5 (lower is better) Translates to: RPTSELLNENLSRVRPRQQILEA*QTRYPN Trigger: ATTTGGGTAGCGTGTTTGCAAAGCTTCCAATATTTG...TTGCCTGGGCCTCACTCTTGAGAGATTCTCATTTAATAGTTCTGAGGTGGGTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376854.6 |
||
| CDS-3UTR CAA 90 bp | CTATTAAATGAGAATCTCTCAAGAGTGAGGCCCAGGCAAAGATTTTTAAAGTGCTTTATCCATCTTCAGTaGCCCATAGTAGAGCTTAAC | + |
|
Preference number: 5 (lower is better) Translates to: LLNENLSRVRPRQRFLKCFIHLQ*PIVELN Trigger: GTTAAGCTCTACTATGGGCAACTGAAGATGGATAAA...GCACTTTAAAAATCTTTGCCTGGGCCTCACTCTTGAGAGATTCTCATTTAATAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000376854.6 |
||
| CDS-3UTR CAA 90 bp | CTATTAAATGAGAATCTCTCAAGAGTGAGGCCCAGGCAAAGATTTTTAAAGTGCAAAGTGCTGTCAGTGTaGAAAACTACAGGTCTAAAG | + |
|
Preference number: 5 (lower is better) Translates to: LLNENLSRVRPRQRFLKCKVLSV*KTTGLK Trigger: CTTTAGACCTGTAGTTTTCAACACTGACAGCACTTT...GCACTTTAAAAATCTTTGCCTGGGCCTCACTCTTGAGAGATTCTCATTTAATAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000376854.6 |
||
| CDS CAA 72 bp | GGCACGTGGAACGTCACCGGCTCGGCCGCACGCCGCTaGGCCATGGGCCCAGAGGCTCGGGCGGAGCCCGCC | + |
|
Preference number: 6 (lower is better) Translates to: GTWNVTGSAARR*AMGPEARAEPA Trigger: GGCGGGCTCCGCCCGAGCCTCTGGGCCCATGGCCAAGCGGCGTGCGGCCGAGCCGGTGACGTTCCACGTGCC 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376854.6 |
||
| CDS CCA 72 bp | GCACGTGGAACGTCACCGGCTCGGCCGCACGCCGCTTaGCCATGGGCCCAGAGGCTCGGGCGGAGCCCGCCA | + |
|
Preference number: 6 (lower is better) Translates to: ARGTSPARPHAA*PWAQRLGRSPP Trigger: TGGCGGGCTCCGCCCGAGCCTCTGGGCCCATGGCCAAGCGGCGTGCGGCCGAGCCGGTGACGTTCCACGTGC 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376854.6 |
||
| CDS CCA 72 bp | GGCGGCGGCAGCGGCGGATCGCCTGTCTCCAGACCGTaGTCCTCACGCTCCTGGCCGCTCGGGGCGCTGTTG | + |
|
Preference number: 6 (lower is better) Translates to: GGGSGGSPVSRP*SSRSWPLGALL Trigger: CAACAGCGCCCCGAGCGGCCAGGAGCGTGAGGACCACGGTCTGGAGACAGGCGATCCGCCGCTGCCGCCGCC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376854.6 |
||
| CDS CAA 72 bp | CCGTGGTCCTCACGCTCCTGGCCGCTCGGGGCGCTGTaGTCCCCGCTGTCACGGCGCTTGCTGGGCGAAGCC | + |
|
Preference number: 6 (lower is better) Translates to: PWSSRSWPLGAL*SPLSRRLLGEA Trigger: GGCTTCGCCCAGCAAGCGCCGTGACAGCGGGGACAACAGCGCCCCGAGCGGCCAGGAGCGTGAGGACCACGG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000376854.6 |
||
| CDS GCA 72 bp | TTGCGCTTTCGGTGCTGCTCTGGGACGCCGAGGAGCTaGCCAGCATGCGCGACCCCGGGCGGCCGGATCCAG | + |
|
Preference number: 6 (lower is better) Translates to: LRFRCCSGTPRS*PACATPGGRIQ Trigger: CTGGATCCGGCCGCCCGGGGTCGCGCATGCTGGGCAGCTCCTCGGCGTCCCAGAGCAGCACCGAAAGCGCAA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376854.6 |
||
| CDS GCA 72 bp | CGCTCGGGGCGCTGTTGTCCCCGCTGTCACGGCGCTTaGTGGGCGAAGCCGAGGGCTCTGCCATGGTCCCTG | + |
|
Preference number: 6 (lower is better) Translates to: RSGRCCPRCHGA*WAKPRALPWSL Trigger: CAGGGACCATGGCAGAGCCCTCGGCTTCGCCCAGCAAGCGCCGTGACAGCGGGGACAACAGCGCCCCGAGCG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000376854.6 |
||
| CDS CAA 72 bp | CCGCTCGGGGCGCTGTTGTCCCCGCTGTCACGGCGCTaGCTGGGCGAAGCCGAGGGCTCTGCCATGGTCCCT | + |
|
Preference number: 6 (lower is better) Translates to: PLGALLSPLSRR*LGEAEGSAMVP Trigger: AGGGACCATGGCAGAGCCCTCGGCTTCGCCCAGCAAGCGCCGTGACAGCGGGGACAACAGCGCCCCGAGCGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000376854.6 |
||
| CDS CAA 90 bp | CGCTCCTGGCCGCTCGGGGCGCTGTTGTCCCCGCTGTCACGGCGCTaGCTGGGCGAAGCCGAGGGCTCTGCCATGGTCCCTGCGTCGATT | + |
|
Preference number: 6 (lower is better) Translates to: RSWPLGALLSPLSRR*LGEAEGSAMVPASI Trigger: AATCGACGCAGGGACCATGGCAGAGCCCTCGGCTTCGCCCAGCAAGCGCCGTGACAGCGGGGACAACAGCGCCCCGAGCGGCCAGGAGCG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000376854.6 |
||
| CDS CAA 90 bp | GTCTCCAGACCGTGGTCCTCACGCTCCTGGCCGCTCGGGGCGCTGTaGTCCCCGCTGTCACGGCGCTTGCTGGGCGAAGCCGAGGGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: VSRPWSSRSWPLGAL*SPLSRRLLGEAEGS Trigger: AGAGCCCTCGGCTTCGCCCAGCAAGCGCCGTGACAGCGGGGACAACAGCGCCCCGAGCGGCCAGGAGCGTGAGGACCACGGTCTGGAGAC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000376854.6 |
||
| CDS CCA 72 bp | GGATCGCCTGTCTCCAGACCGTGGTCCTCACGCTCCTaGCCGCTCGGGGCGCTGTTGTCCCCGCTGTCACGG | + |
|
Preference number: 6 (lower is better) Translates to: GSPVSRPWSSRS*PLGALLSPLSR Trigger: CCGTGACAGCGGGGACAACAGCGCCCCGAGCGGCCAGGAGCGTGAGGACCACGGTCTGGAGACAGGCGATCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000376854.6 |
||
| CDS CAA 90 bp | GCTCCCGCGCTCAGCCCTCGCCGCCGCCGAGATGCGGCCCGGACGTaGAGAAGCAACCGCGAAGCGGCGGAGATTCGAACCTGCGCACAA | + |
|
Preference number: 6 (lower is better) Translates to: APALSPRRRRDAART*RSNREAAEIRTCAQ Trigger: TTGTGCGCAGGTTCGAATCTCCGCCGCTTCGCGGTTGCTTCTCAACGTCCGGGCCGCATCTCGGCGGCGGCGAGGGCTGAGCGCGGGAGC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376854.6 |
||
| CDS CCA 72 bp | GCGAAGTCGCAAAGCAGGAGCCGCTTCCAAGGCACGTaGAACGTCACCGGCTCGGCCGCACGCCGCTTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: AKSQSRSRFQGT*NVTGSAARRLA Trigger: GGCCAAGCGGCGTGCGGCCGAGCCGGTGACGTTCCACGTGCCTTGGAAGCGGCTCCTGCTTTGCGACTTCGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376854.6 |
||
| CDS CAA 72 bp | CTCAGCCCTCGCCGCCGCCGAGATGCGGCCCGGACGTaGAGAAGCAACCGCGAAGCGGCGGAGATTCGAACC | + |
|
Preference number: 6 (lower is better) Translates to: LSPRRRRDAART*RSNREAAEIRT Trigger: GGTTCGAATCTCCGCCGCTTCGCGGTTGCTTCTCAACGTCCGGGCCGCATCTCGGCGGCGGCGAGGGCTGAG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376854.6 |
||
| CDS CCA 72 bp | GGTCCCTGCGTCGATTTTGCGCTTTCGGTGCTGCTCTaGGACGCCGAGGAGCTGCCCAGCATGCGCGACCCC | + |
|
Preference number: 6 (lower is better) Translates to: GPCVDFALSVLL*DAEELPSMRDP Trigger: GGGGTCGCGCATGCTGGGCAGCTCCTCGGCGTCCCAGAGCAGCACCGAAAGCGCAAAATCGACGCAGGGACC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376854.6 |
||
| CDS GCA 72 bp | GCCATGGTCCCTGCGTCGATTTTGCGCTTTCGGTGCTaGTCTGGGACGCCGAGGAGCTGCCCAGCATGCGCG | + |
|
Preference number: 6 (lower is better) Translates to: AMVPASILRFRC*SGTPRSCPACA Trigger: CGCGCATGCTGGGCAGCTCCTCGGCGTCCCAGAGCAGCACCGAAAGCGCAAAATCGACGCAGGGACCATGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376854.6 |
||
| CDS GCA 72 bp | GCTGTCACGGCGCTTGCTGGGCGAAGCCGAGGGCTCTaGCATGGTCCCTGCGTCGATTTTGCGCTTTCGGTG | + |
|
Preference number: 6 (lower is better) Translates to: AVTALAGRSRGL*HGPCVDFALSV Trigger: CACCGAAAGCGCAAAATCGACGCAGGGACCATGGCAGAGCCCTCGGCTTCGCCCAGCAAGCGCCGTGACAGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376854.6 |
||
| CDS CCA 72 bp | CACGGCGCTTGCTGGGCGAAGCCGAGGGCTCTGCCATaGTCCCTGCGTCGATTTTGCGCTTTCGGTGCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: HGACWAKPRALP*SLRRFCAFGAA Trigger: AGCAGCACCGAAAGCGCAAAATCGACGCAGGGACCATGGCAGAGCCCTCGGCTTCGCCCAGCAAGCGCCGTG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376854.6 |
||
| CDS CAA 72 bp | GAAGCCGAGGGCTCTGCCATGGTCCCTGCGTCGATTTaGCGCTTTCGGTGCTGCTCTGGGACGCCGAGGAGC | + |
|
Preference number: 6 (lower is better) Translates to: EAEGSAMVPASI*RFRCCSGTPRS Trigger: GCTCCTCGGCGTCCCAGAGCAGCACCGAAAGCGCAAAATCGACGCAGGGACCATGGCAGAGCCCTCGGCTTC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376854.6 |
||
| CDS GCA 72 bp | TCTGCCATGGTCCCTGCGTCGATTTTGCGCTTTCGGTaGTGCTCTGGGACGCCGAGGAGCTGCCCAGCATGC | + |
|
Preference number: 6 (lower is better) Translates to: SAMVPASILRFR*CSGTPRSCPAC Trigger: GCATGCTGGGCAGCTCCTCGGCGTCCCAGAGCAGCACCGAAAGCGCAAAATCGACGCAGGGACCATGGCAGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376854.6 |
||
| CDS GCA 72 bp | AAGCCGAGGGCTCTGCCATGGTCCCTGCGTCGATTTTaGGCTTTCGGTGCTGCTCTGGGACGCCGAGGAGCT | + |
|
Preference number: 6 (lower is better) Translates to: KPRALPWSLRRF*AFGAALGRRGA Trigger: AGCTCCTCGGCGTCCCAGAGCAGCACCGAAAGCGCAAAATCGACGCAGGGACCATGGCAGAGCCCTCGGCTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376854.6 |
||
| CDS GCA 72 bp | CTTGCTGGGCGAAGCCGAGGGCTCTGCCATGGTCCCTaGGTCGATTTTGCGCTTTCGGTGCTGCTCTGGGAC | + |
|
Preference number: 6 (lower is better) Translates to: LAGRSRGLCHGP*VDFALSVLLWD Trigger: GTCCCAGAGCAGCACCGAAAGCGCAAAATCGACGCAGGGACCATGGCAGAGCCCTCGGCTTCGCCCAGCAAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376854.6 |
||
| CDS TCA 72 bp | GACTCCATGTCAACCTCAGCCCCTTCATTCCTGCCCTaGAGTGTTGCTTCTGTCAGGGTGTCTTCACTTAAA | + |
|
Preference number: 6 (lower is better) Translates to: DSMSTSAPSFLP*SVASVRVSSLK Trigger: TTTAAGTGAAGACACCCTGACAGAAGCAACACTTCAGGGCAGGAATGAAGGGGCTGAGGTTGACATGGAGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376854.6 |
||
| CDS GCA 72 bp | CACTTAGAGACATCTCCTCAAATCAGCCAATCCCACTaGTTCGGCTCCTTACATCAGGACTCCATGTCAACC | + |
|
Preference number: 6 (lower is better) Translates to: HLETSPQISQSH*FGSLHQDSMST Trigger: GGTTGACATGGAGTCCTGATGTAAGGAGCCGAAGCAGTGGGATTGGCTGATTTGAGGAGATGTCTCTAAGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376854.6 |
||
| CDS CAA 90 bp | AGGACTCCATGTCAACCTCAGCCCCTTCATTCCTGCCCTGAAGTGTaGCTTCTGTCAGGGTGTCTTCACTTAAATCTTCAATGTCTGCCA | + |
|
Preference number: 6 (lower is better) Translates to: RTPCQPQPLHSCPEV*LLSGCLHLNLQCLP Trigger: TGGCAGACATTGAAGATTTAAGTGAAGACACCCTGACAGAAGCAACACTTCAGGGCAGGAATGAAGGGGCTGAGGTTGACATGGAGTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376854.6 |
||
| CDS GCA 72 bp | GGCAAAGGATTCCTCCAGTACTGGAAGGTATTATACTaGCAAAATTCTTCATTGTGCTGGCGCGATGCGACC | + |
|
Preference number: 6 (lower is better) Translates to: GKGFLQYWKVLY*QNSSLCWRDAT Trigger: GGTCGCATCGCGCCAGCACAATGAAGAATTTTGGCAGTATAATACCTTCCAGTACTGGAGGAATCCTTTGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376854.6 |
||
| CDS CAA 72 bp | TGTCAACCTCAGCCCCTTCATTCCTGCCCTGAAGTGTaGCTTCTGTCAGGGTGTCTTCACTTAAATCTTCAA | + |
|
Preference number: 6 (lower is better) Translates to: CQPQPLHSCPEV*LLSGCLHLNLQ Trigger: TTGAAGATTTAAGTGAAGACACCCTGACAGAAGCAACACTTCAGGGCAGGAATGAAGGGGCTGAGGTTGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376854.6 |
||
| CDS CCA 72 bp | GCCAGATCAATAGGAGGCAAAGGATTCCTCCAGTACTaGAAGGTATTATACTGCCAAAATTCTTCATTGTGC | + |
|
Preference number: 6 (lower is better) Translates to: ARSIGGKGFLQY*KVLYCQNSSLC Trigger: GCACAATGAAGAATTTTGGCAGTATAATACCTTCCAGTACTGGAGGAATCCTTTGCCTCCTATTGATCTGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376854.6 |
||