Pregenerated sensors for C9ORF16 (Homo sapiens)
Ensembl gene IDs: ENSG00000171159Ensembl transcript IDs: ENST00000372994.2, ENST00000486420.1, ENST00000489240.1, ENST00000492588.1
Found 57 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGTGGGGAGCGCCCAGGAGTTGGGTGGGCAGGCAAGTGGGTGGGTTaGAGGCCCACTCTTGGCCCCAGGAGGGCATGCCAGGTGGTGGGG | + |
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Preference number: 1 (lower is better) Translates to: SGERPGVGWAGKWVG*RPTLGPRRACQVVG Trigger: CCCCACCACCTGGCATGCCCTCCTGGGGCCAAGAGTGGGCCTGCAACCCACCCACTTGCCTGCCCACCCAACTCCTGGGCGCTCCCCACT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000372994.2 |
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| CDS-3UTR CCA 90 bp | TGGGCAGGCAAGTGGGTGGGTTGCAGGCCCACTCTTGGCCCCAGGAGGGCATGCAGGGCCGCGCGACGATaGAACGCGGCGACCGTCGCG | + |
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Preference number: 4 (lower is better) Translates to: WAGKWVGCRPTLGPRRACRAARR*NAATVA Trigger: CGCGACGGTCGCCGCGTTCCATCGTCGCGCGGCCCT...GCATGCCCTCCTGGGGCCAAGAGTGGGCCTGCAACCCACCCACTTGCCTGCCCA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372994.2 |
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| CDS-3UTR GCA 90 bp | GGCAGGCAAGTGGGTGGGTTGCAGGCCCACTCTTGGCCCCAGGAGGGCATGCCAGTTGGGGCCCGACATTaGGGGCTCGGGCGCCCGAAG | + |
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Preference number: 4 (lower is better) Translates to: GRQVGGLQAHSWPQEGMPVGARH*GLGRPK Trigger: CTTCGGGCGCCCGAGCCCGCAATGTCGGGCCCCAAC...TGGCATGCCCTCCTGGGGCCAAGAGTGGGCCTGCAACCCACCCACTTGCCTGCC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000372994.2 |
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| CDS-3UTR GCA 90 bp | GGCAGGCAAGTGGGTGGGTTGCAGGCCCACTCTTGGCCCCAGGAGGGCATGCCAGCCTCCCCGAGCTGCTaGTGGAACTCCAGGCGTGTC | + |
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Preference number: 4 (lower is better) Translates to: GRQVGGLQAHSWPQEGMPASPSC*WNSRRV Trigger: GACACGCCTGGAGTTCCAGCAGCAGCTCGGGGAGGC...TGGCATGCCCTCCTGGGGCCAAGAGTGGGCCTGCAACCCACCCACTTGCCTGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000372994.2 |
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| CDS-3UTR GCA 90 bp | GGCAGGCAAGTGGGTGGGTTGCAGGCCCACTCTTGGCCCCAGGAGGGCATGCCAGGCAAGTGGGTGGGTTaGAGGCCCACTCTTGGCCCC | + |
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Preference number: 4 (lower is better) Translates to: GRQVGGLQAHSWPQEGMPGKWVG*RPTLGP Trigger: GGGGCCAAGAGTGGGCCTGCAACCCACCCACTTGCC...TGGCATGCCCTCCTGGGGCCAAGAGTGGGCCTGCAACCCACCCACTTGCCTGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372994.2 |
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| CDS-3UTR CCA 90 bp | GGCAGGCAAGTGGGTGGGTTGCAGGCCCACTCTTGGCCCCAGGAGGGCATGCCAAAAGCCGGCGCCGGATaGAAGGTGGAGGCGGCGGAT | + |
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Preference number: 4 (lower is better) Translates to: GRQVGGLQAHSWPQEGMPKAGAG*KVEAAD Trigger: ATCCGCCGCCTCCACCTTCCATCCGGCGCCGGCTTT...TGGCATGCCCTCCTGGGGCCAAGAGTGGGCCTGCAACCCACCCACTTGCCTGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000372994.2 |
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| CDS-3UTR CCA 90 bp | TGGGCAGGCAAGTGGGTGGGTTGCAGGCCCACTCTTGGCCCCAGGAGGGCATGCGGGTTGGGTCCCGGTTaGGGGCTCTTGGAGCCTAGG | + |
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Preference number: 4 (lower is better) Translates to: WAGKWVGCRPTLGPRRACGLGPG*GLLEPR Trigger: CCTAGGCTCCAAGAGCCCCCAACCGGGACCCAACCC...GCATGCCCTCCTGGGGCCAAGAGTGGGCCTGCAACCCACCCACTTGCCTGCCCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000372994.2 |
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| CDS-3UTR CCA 90 bp | GGGCAGGCAAGTGGGTGGGTTGCAGGCCCACTCTTGGCCCCAGGAGGGCATGCCTTGCAGGCCCACTCTTaGCCCCAGGAGGGCATGCCA | + |
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Preference number: 4 (lower is better) Translates to: GQASGWVAGPLLAPGGHALQAHS*PQEGMP Trigger: TGGCATGCCCTCCTGGGGCCAAGAGTGGGCCTGCAA...GGCATGCCCTCCTGGGGCCAAGAGTGGGCCTGCAACCCACCCACTTGCCTGCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000372994.2 |
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| CDS-3UTR CCA 90 bp | TGGGCAGGCAAGTGGGTGGGTTGCAGGCCCACTCTTGGCCCCAGGAGGGCATGCCGCCCAGGAGTTGGGTaGGCAGGCAAGTGGGTGGGT | + |
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Preference number: 4 (lower is better) Translates to: WAGKWVGCRPTLGPRRACRPGVG*AGKWVG Trigger: ACCCACCCACTTGCCTGCCCACCCAACTCCTGGGCG...GCATGCCCTCCTGGGGCCAAGAGTGGGCCTGCAACCCACCCACTTGCCTGCCCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372994.2 |
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| CDS-3UTR CCA 90 bp | GGCAGGCAAGTGGGTGGGTTGCAGGCCCACTCTTGGCCCCAGGAGGGCATGCCAGGGCAGGCAAGTGGGTaGGTTGCAGGCCCACTCTTG | + |
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Preference number: 4 (lower is better) Translates to: GRQVGGLQAHSWPQEGMPGQASG*VAGPLL Trigger: CAAGAGTGGGCCTGCAACCCACCCACTTGCCTGCCC...TGGCATGCCCTCCTGGGGCCAAGAGTGGGCCTGCAACCCACCCACTTGCCTGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372994.2 |
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| CDS-3UTR GCA 90 bp | TGGGCAGGCAAGTGGGTGGGTTGCAGGCCCACTCTTGGCCCCAGGAGGGCATGCAACTCCAGGCGTGTCTaGCGGTTGGACTCCAGCAGC | + |
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Preference number: 4 (lower is better) Translates to: WAGKWVGCRPTLGPRRACNSRRV*RLDSSS Trigger: GCTGCTGGAGTCCAACCGGCAGACACGCCTGGAGTT...GCATGCCCTCCTGGGGCCAAGAGTGGGCCTGCAACCCACCCACTTGCCTGCCCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372994.2 |
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| CDS-3UTR CCA 90 bp | TGGGCAGGCAAGTGGGTGGGTTGCAGGCCCACTCTTGGCCCCAGGAGGGCATGCAGGCGGGCGTGGAGGTaGTCATTCTTCTCCTCCAGG | + |
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Preference number: 4 (lower is better) Translates to: WAGKWVGCRPTLGPRRACRRAWR*SFFSSR Trigger: CCTGGAGGAGAAGAATGACCACCTCCACGCCCGCCT...GCATGCCCTCCTGGGGCCAAGAGTGGGCCTGCAACCCACCCACTTGCCTGCCCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372994.2 |
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| CDS-3UTR CCA 90 bp | TGGGCAGGCAAGTGGGTGGGTTGCAGGCCCACTCTTGGCCCCAGGAGGGCATGCTCCTGGAGGCGGGCGTaGAGGTGGTCATTCTTCTCC | + |
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Preference number: 4 (lower is better) Translates to: WAGKWVGCRPTLGPRRACSWRRA*RWSFFS Trigger: GGAGAAGAATGACCACCTCCACGCCCGCCTCCAGGA...GCATGCCCTCCTGGGGCCAAGAGTGGGCCTGCAACCCACCCACTTGCCTGCCCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372994.2 |
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| CDS-3UTR CCA 90 bp | GGCAGGCAAGTGGGTGGGTTGCAGGCCCACTCTTGGCCCCAGGAGGGCATGCCATTCTTCTCCTCCAGGTaGTCCAGACAGGAGTTGATC | + |
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Preference number: 4 (lower is better) Translates to: GRQVGGLQAHSWPQEGMPFFSSR*SRQELI Trigger: GATCAACTCCTGTCTGGACCACCTGGAGGAGAAGAA...TGGCATGCCCTCCTGGGGCCAAGAGTGGGCCTGCAACCCACCCACTTGCCTGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372994.2 |
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| CDS CCA 90 bp | GGGCCCGACATTGCGGGCTCGGGCGCCCGAAGGGCCGCGCGACGATaGAACGCGGCGACCGTCGCGCCGAAAGCCGGCGCCGGATGGAAG | + |
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Preference number: 5 (lower is better) Translates to: GPDIAGSGARRAARR*NAATVAPKAGAGWK Trigger: CTTCCATCCGGCGCCGGCTTTCGGCGCGACGGTCGCCGCGTTCCATCGTCGCGCGGCCCTTCGGGCGCCCGAGCCCGCAATGTCGGGCCC 77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000372994.2 ENST00000492588.1 |
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| CDS-3UTR CAA 90 bp | GGGCAGGCAAGTGGGTGGGTTGCAGGCCCACTCTTGGCCCCAGGAGGGCATGCCCGTTGGGGCCCGACATaGCGGGCTCGGGCGCCCGAA | + |
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Preference number: 5 (lower is better) Translates to: GQASGWVAGPLLAPGGHARWGPT*RARAPE Trigger: TTCGGGCGCCCGAGCCCGCAATGTCGGGCCCCAACG...GGCATGCCCTCCTGGGGCCAAGAGTGGGCCTGCAACCCACCCACTTGCCTGCCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000372994.2 |
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| CDS-3UTR CAA 90 bp | GGGCAGGCAAGTGGGTGGGTTGCAGGCCCACTCTTGGCCCCAGGAGGGCATGCCGTTGCAGGCCCACTCTaGGCCCCAGGAGGGCATGCC | + |
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Preference number: 5 (lower is better) Translates to: GQASGWVAGPLLAPGGHAVAGPL*APGGHA Trigger: GGCATGCCCTCCTGGGGCCAAGAGTGGGCCTGCAAC...GGCATGCCCTCCTGGGGCCAAGAGTGGGCCTGCAACCCACCCACTTGCCTGCCC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000372994.2 |
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| CDS CCA 90 bp | CGACGATGGAACGCGGCGACCGTCGCGCCGAAAGCCGGCGCCGGATaGAAGGTGGAGGCGGCGGATAGAACACGGGCCGGAAGGGTAGAA | + |
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Preference number: 5 (lower is better) Translates to: RRWNAATVAPKAGAG*KVEAADRTRAGRVE Trigger: TTCTACCCTTCCGGCCCGTGTTCTATCCGCCGCCTCCACCTTCCATCCGGCGCCGGCTTTCGGCGCGACGGTCGCCGCGTTCCATCGTCG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372994.2 |
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| CDS-3UTR CAA 90 bp | GGCAGGCAAGTGGGTGGGTTGCAGGCCCACTCTTGGCCCCAGGAGGGCATGCCAATCCCCAGGTCTCCGTaGGGGCCCGACATTGCGGGC | + |
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Preference number: 5 (lower is better) Translates to: GRQVGGLQAHSWPQEGMPIPRSP*GPDIAG Trigger: GCCCGCAATGTCGGGCCCCAACGGAGACCTGGGGAT...TGGCATGCCCTCCTGGGGCCAAGAGTGGGCCTGCAACCCACCCACTTGCCTGCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000372994.2 |
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| CDS-3UTR CAA 90 bp | TGGGCAGGCAAGTGGGTGGGTTGCAGGCCCACTCTTGGCCCCAGGAGGGCATGCAGGCAAGTGGGTGGGTaGCAGGCCCACTCTTGGCCC | + |
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Preference number: 5 (lower is better) Translates to: WAGKWVGCRPTLGPRRACRQVGG*QAHSWP Trigger: GGGCCAAGAGTGGGCCTGCAACCCACCCACTTGCCT...GCATGCCCTCCTGGGGCCAAGAGTGGGCCTGCAACCCACCCACTTGCCTGCCCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372994.2 |
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| CDS TCA 90 bp | TCCACGGCCACTCCAGAGCTGCCCTGCTCAGCAACACAGTGTCCCTaGGGACTCAAGGTCTGGGCCTGTGCCCACTGCGGGACCCAGTTC | + |
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Preference number: 5 (lower is better) Translates to: STATPELPCSATQCP*GLKVWACAHCGTQF Trigger: GAACTGGGTCCCGCAGTGGGCACAGGCCCAGACCTTGAGTCCTCAGGGACACTGTGTTGCTGAGCAGGGCAGCTCTGGAGTGGCCGTGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000492588.1 |
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| CDS GCA 90 bp | GCGGGACCCAGTTCTGAGCCAGCCCATGACTCACATACACTCAGCTaGCAGCTTGAGACCAAGGGGGAAGCAGCCGGTGGAGGAGCTGGA | + |
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Preference number: 5 (lower is better) Translates to: AGPSSEPAHDSHTLS*QLETKGEAAGGGAG Trigger: TCCAGCTCCTCCACCGGCTGCTTCCCCCTTGGTCTCAAGCTGGCAGCTGAGTGTATGTGAGTCATGGGCTGGCTCAGAACTGGGTCCCGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000492588.1 |
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| CDS GCA 90 bp | CTGCTCAGCAACACAGTGTCCCTGAGGACTCAAGGTCTGGGCCTGTaGCCACTGCGGGACCCAGTTCTGAGCCAGCCCATGACTCACATA | + |
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Preference number: 5 (lower is better) Translates to: LLSNTVSLRTQGLGL*PLRDPVLSQPMTHI Trigger: TATGTGAGTCATGGGCTGGCTCAGAACTGGGTCCCGCAGTGGGCACAGGCCCAGACCTTGAGTCCTCAGGGACACTGTGTTGCTGAGCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000492588.1 |
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| CDS GCA 90 bp | CGGTGGAGGAGCTGGAGGAGCGTATCTGGGTTATGGGTGCATATGTaGCTGTGTTCTAGGAAAGGGCACCCGTTGCCTAGAGCCAGCCAC | + |
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Preference number: 5 (lower is better) Translates to: RWRSWRSVSGLWVHM*LCSRKGHPLPRASH Trigger: GTGGCTGGCTCTAGGCAACGGGTGCCCTTTCCTAGAACACAGGCACATATGCACCCATAACCCAGATACGCTCCTCCAGCTCCTCCACCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000489240.1 ENST00000492588.1 |
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| CDS GCA 90 bp | GAAGCAGCCGGTGGAGGAGCTGGAGGAGCGTATCTGGGTTATGGGTaGATATGTGCCTGTGTTCTAGGAAAGGGCACCCGTTGCCTAGAG | + |
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Preference number: 5 (lower is better) Translates to: EAAGGGAGGAYLGYG*ICACVLGKGTRCLE Trigger: CTCTAGGCAACGGGTGCCCTTTCCTAGAACACAGGCACATATGCACCCATAACCCAGATACGCTCCTCCAGCTCCTCCACCGGCTGCTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000489240.1 ENST00000492588.1 |
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| CDS GCA 90 bp | GGTTATGGGTGCATATGTGCCTGTGTTCTAGGAAAGGGCACCCGTTaGCTAGAGCCAGCCACCCTCACAGACGACAGCGTCCTGGGAAAT | + |
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Preference number: 5 (lower is better) Translates to: GYGCICACVLGKGTR*LEPATLTDDSVLGN Trigger: ATTTCCCAGGACGCTGTCGTCTGTGAGGGTGGCTGGCTCTAGGCAACGGGTGCCCTTTCCTAGAACACAGGCACATATGCACCCATAACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000489240.1 ENST00000492588.1 |
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| CDS CCA 90 bp | ACCTGCCCAGGGTCCTCCAGGTTGGTAACAGCCGAAACTCAGGATTaGACTTGGGGGTCAGGGTCACTTGGGTTTGAATTTCAGCTCTGC | + |
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Preference number: 5 (lower is better) Translates to: TCPGSSRLVTAETQD*TWGSGSLGFEFQLC Trigger: GCAGAGCTGAAATTCAAACCCAAGTGACCCTGACCCCCAAGTCCAATCCTGAGTTTCGGCTGTTACCAACCTGGAGGACCCTGGGCAGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000489240.1 ENST00000492588.1 |
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| CDS GCA 90 bp | GAAGCCTCTGACTTTCCAGCCTCTCCGCCATTGCTCAACTATCCCTaGAACCTAGAATGCCTCAACCACAACAGCCCTTCAAGGACCAGC | + |
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Preference number: 5 (lower is better) Translates to: EASDFPASPPLLNYP*NLECLNHNSPSRTS Trigger: GCTGGTCCTTGAAGGGCTGTTGTGGTTGAGGCATTCTAGGTTGCAGGGATAGTTGAGCAATGGCGGAGAGGCTGGAAAGTCAGAGGCTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000492588.1 |
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| CDS CCA 90 bp | TTCTGCCCAGGGTCCTCCAGGTTGGTAACAGCCGAAACTCAGGATTaGACTTGGGGGTCAGGGTCACTTGGGTTTGAATTTCAGCTCTGC | + |
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Preference number: 5 (lower is better) Translates to: FCPGSSRLVTAETQD*TWGSGSLGFEFQLC Trigger: GCAGAGCTGAAATTCAAACCCAAGTGACCCTGACCCCCAAGTCCAATCCTGAGTTTCGGCTGTTACCAACCTGGAGGACCCTGGGCAGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000486420.1 |
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| CDS TCA 90 bp | GACTGCTGTGCTTATCTGAGTGCTGTTATGTTTCCCCATGAAAGATaGACGGTCCTGTGTTCGCTGCTGGCTCCCTGGTGCCCTCACAGT | + |
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Preference number: 5 (lower is better) Translates to: DCCAYLSAVMFPHER*TVLCSLLAPWCPHS Trigger: ACTGTGAGGGCACCAGGGAGCCAGCAGCGAACACAGGACCGTTCATCTTTCATGGGGAAACATAACAGCACTCAGATAAGCACAGCAGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000492588.1 |
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| CDS TCA 90 bp | AGCCGAAACTCAGGATTGGACTTGGGGGTCAGGGTCACTTGGGTTTaGATTTCAGCTCTGCTTTACCCCAGCAAGTTGTACCTTTCTGCT | + |
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Preference number: 5 (lower is better) Translates to: SRNSGLDLGVRVTWV*ISALLYPSKLYLSA Trigger: AGCAGAAAGGTACAACTTGCTGGGGTAAAGCAGAGCTGAAATTCAAACCCAAGTGACCCTGACCCCCAAGTCCAATCCTGAGTTTCGGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000486420.1 ENST00000489240.1 ENST00000492588.1 |
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| CDS CAA 90 bp | CTCCCGCCTCCACCGGCATCCCCAGGTCTCCGTTGGGGCCCGACATaGCGGGCTCGGGCGCCCGAAGGGCCGCGCGACGATGGAACGCGG | + |
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Preference number: 6 (lower is better) Translates to: LPPPPASPGLRWGPT*RARAPEGPRDDGTR Trigger: CCGCGTTCCATCGTCGCGCGGCCCTTCGGGCGCCCGAGCCCGCAATGTCGGGCCCCAACGGAGACCTGGGGATGCCGGTGGAGGCGGGAG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000372994.2 ENST00000489240.1 ENST00000492588.1 |
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| CDS CAA 72 bp | CCACCGGCATCCCCAGGTCTCCGTTGGGGCCCGACATaGCGGGCTCGGGCGCCCGAAGGGCCGCGCGACGAT | + |
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Preference number: 6 (lower is better) Translates to: PPASPGLRWGPT*RARAPEGPRDD Trigger: ATCGTCGCGCGGCCCTTCGGGCGCCCGAGCCCGCAATGTCGGGCCCCAACGGAGACCTGGGGATGCCGGTGG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000372994.2 ENST00000489240.1 ENST00000492588.1 |
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| CDS CCA 72 bp | AACGCGGCGACCGTCGCGCCGAAAGCCGGCGCCGGATaGAAGGTGGAGGCGGCGGATAGAACACGGGCCGGA | + |
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Preference number: 6 (lower is better) Translates to: NAATVAPKAGAG*KVEAADRTRAG Trigger: TCCGGCCCGTGTTCTATCCGCCGCCTCCACCTTCCATCCGGCGCCGGCTTTCGGCGCGACGGTCGCCGCGTT 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372994.2 |
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| CDS GCA 72 bp | AACACAGTGTCCCTGAGGACTCAAGGTCTGGGCCTGTaGCCACTGCGGGACCCAGTTCTGAGCCAGCCCATG | + |
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Preference number: 6 (lower is better) Translates to: NTVSLRTQGLGL*PLRDPVLSQPM Trigger: CATGGGCTGGCTCAGAACTGGGTCCCGCAGTGGGCACAGGCCCAGACCTTGAGTCCTCAGGGACACTGTGTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000492588.1 |
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| CDS CAA 72 bp | AGCCAGCCCATGACTCACATACACTCAGCTGCCAGCTaGAGACCAAGGGGGAAGCAGCCGGTGGAGGAGCTG | + |
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Preference number: 6 (lower is better) Translates to: SQPMTHIHSAAS*RPRGKQPVEEL Trigger: CAGCTCCTCCACCGGCTGCTTCCCCCTTGGTCTCAAGCTGGCAGCTGAGTGTATGTGAGTCATGGGCTGGCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000492588.1 |
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| CDS CAA 90 bp | GGGTTATGGGTGCATATGTGCCTGTGTTCTAGGAAAGGGCACCCGTaGCCTAGAGCCAGCCACCCTCACAGACGACAGCGTCCTGGGAAA | + |
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Preference number: 6 (lower is better) Translates to: GLWVHMCLCSRKGHP*PRASHPHRRQRPGK Trigger: TTTCCCAGGACGCTGTCGTCTGTGAGGGTGGCTGGCTCTAGGCAACGGGTGCCCTTTCCTAGAACACAGGCACATATGCACCCATAACCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000489240.1 ENST00000492588.1 |
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| CDS GCA 72 bp | TGCATATGTGCCTGTGTTCTAGGAAAGGGCACCCGTTaGCTAGAGCCAGCCACCCTCACAGACGACAGCGTC | + |
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Preference number: 6 (lower is better) Translates to: CICACVLGKGTR*LEPATLTDDSV Trigger: GACGCTGTCGTCTGTGAGGGTGGCTGGCTCTAGGCAACGGGTGCCCTTTCCTAGAACACAGGCACATATGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000489240.1 ENST00000492588.1 |
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| CDS GCA 72 bp | AGTTCTGAGCCAGCCCATGACTCACATACACTCAGCTaGCAGCTTGAGACCAAGGGGGAAGCAGCCGGTGGA | + |
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Preference number: 6 (lower is better) Translates to: SSEPAHDSHTLS*QLETKGEAAGG Trigger: TCCACCGGCTGCTTCCCCCTTGGTCTCAAGCTGGCAGCTGAGTGTATGTGAGTCATGGGCTGGCTCAGAACT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000492588.1 |
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| CDS CAA 90 bp | CAGCATGGAGTTGATGGCAGCGTATTCTGCCCAGGGTCCTCCAGGTaGGTAACAGCCGAAACTCAGGATTGGACTTGGGGGTCAGGGTCA | + |
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Preference number: 6 (lower is better) Translates to: QHGVDGSVFCPGSSR*VTAETQDWTWGSGS Trigger: TGACCCTGACCCCCAAGTCCAATCCTGAGTTTCGGCTGTTACCAACCTGGAGGACCCTGGGCAGAATACGCTGCCATCAACTCCATGCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000486420.1 |
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| CDS GCA 72 bp | GGTGGAGGAGCTGGAGGAGCGTATCTGGGTTATGGGTaGATATGTGCCTGTGTTCTAGGAAAGGGCACCCGT | + |
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Preference number: 6 (lower is better) Translates to: GGGAGGAYLGYG*ICACVLGKGTR Trigger: ACGGGTGCCCTTTCCTAGAACACAGGCACATATGCACCCATAACCCAGATACGCTCCTCCAGCTCCTCCACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000489240.1 ENST00000492588.1 |
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| CDS CCA 72 bp | AGCCGGTGGAGGAGCTGGAGGAGCGTATCTGGGTTATaGGTGCATATGTGCCTGTGTTCTAGGAAAGGGCAC | + |
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Preference number: 6 (lower is better) Translates to: SRWRSWRSVSGL*VHMCLCSRKGH Trigger: GTGCCCTTTCCTAGAACACAGGCACATATGCACCCATAACCCAGATACGCTCCTCCAGCTCCTCCACCGGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000489240.1 ENST00000492588.1 |
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| CDS CAA 72 bp | GTTGATGGCAGCGTATTCTGCCCAGGGTCCTCCAGGTaGGTAACAGCCGAAACTCAGGATTGGACTTGGGGG | + |
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Preference number: 6 (lower is better) Translates to: VDGSVFCPGSSR*VTAETQDWTWG Trigger: CCCCCAAGTCCAATCCTGAGTTTCGGCTGTTACCAACCTGGAGGACCCTGGGCAGAATACGCTGCCATCAAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000486420.1 |
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| CDS CCA 72 bp | ATTCTCAGGCCCTTTGAACATGCTGCTGTCTCTGCCTaGAAGGTGCTGGGTCCTCCCATCTTCCTTCCCTTC | + |
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Preference number: 6 (lower is better) Translates to: ILRPFEHAAVSA*KVLGPPIFLPF Trigger: GAAGGGAAGGAAGATGGGAGGACCCAGCACCTTCCAGGCAGAGACAGCAGCATGTTCAAAGGGCCTGAGAAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000492588.1 |
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| CDS TCA 72 bp | GCCCTCCTCAGCCCTCCACGACCTTCTCTCCAGGATTaGCTGCTGTGCTTATCTGAGTGCTGTTATGTTTCC | + |
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Preference number: 6 (lower is better) Translates to: ALLSPPRPSLQD*LLCLSECCYVS Trigger: GGAAACATAACAGCACTCAGATAAGCACAGCAGTCAATCCTGGAGAGAAGGTCGTGGAGGGCTGAGGAGGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000492588.1 |
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| CDS GCA 72 bp | AGCTGGAGGAGCGTATCTGGGTTATGGGTGCATATGTaGCTGTGTTCTAGGAAAGGGCACCCGTTGCCTAGA | + |
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Preference number: 6 (lower is better) Translates to: SWRSVSGLWVHM*LCSRKGHPLPR Trigger: TCTAGGCAACGGGTGCCCTTTCCTAGAACACAGGCACATATGCACCCATAACCCAGATACGCTCCTCCAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000489240.1 ENST00000492588.1 |
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| CDS GCA 72 bp | GACTTTCCAGCCTCTCCGCCATTGCTCAACTATCCCTaGAACCTAGAATGCCTCAACCACAACAGCCCTTCA | + |
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Preference number: 6 (lower is better) Translates to: DFPASPPLLNYP*NLECLNHNSPS Trigger: TGAAGGGCTGTTGTGGTTGAGGCATTCTAGGTTGCAGGGATAGTTGAGCAATGGCGGAGAGGCTGGAAAGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000492588.1 |
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| CDS CCA 72 bp | GGGTCCTCCAGGTTGGTAACAGCCGAAACTCAGGATTaGACTTGGGGGTCAGGGTCACTTGGGTTTGAATTT | + |
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Preference number: 6 (lower is better) Translates to: GSSRLVTAETQD*TWGSGSLGFEF Trigger: AAATTCAAACCCAAGTGACCCTGACCCCCAAGTCCAATCCTGAGTTTCGGCTGTTACCAACCTGGAGGACCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000486420.1 ENST00000489240.1 ENST00000492588.1 |
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| CDS CAA 90 bp | CAGCCGAAACTCAGGATTGGACTTGGGGGTCAGGGTCACTTGGGTTaGAATTTCAGCTCTGCTTTACCCCAGCAAGTTGTACCTTTCTGC | + |
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Preference number: 6 (lower is better) Translates to: QPKLRIGLGGQGHLG*NFSSALPQQVVPFC Trigger: GCAGAAAGGTACAACTTGCTGGGGTAAAGCAGAGCTGAAATTCAAACCCAAGTGACCCTGACCCCCAAGTCCAATCCTGAGTTTCGGCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000486420.1 ENST00000489240.1 ENST00000492588.1 |
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| CDS TCA 72 bp | CTGCTGTGCTTATCTGAGTGCTGTTATGTTTCCCCATaGAAGATGAACGGTCCTGTGTTCGCTGCTGGCTCC | + |
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Preference number: 6 (lower is better) Translates to: LLCLSECCYVSP*KMNGPVFAAGS Trigger: GGAGCCAGCAGCGAACACAGGACCGTTCATCTTTCATGGGGAAACATAACAGCACTCAGATAAGCACAGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000492588.1 |
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| CDS GCA 72 bp | TGGGGGTCAGGGTCACTTGGGTTTGAATTTCAGCTCTaGTTTACCCCAGCAAGTTGTACCTTTCTGCTTCCC | + |
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Preference number: 6 (lower is better) Translates to: WGSGSLGFEFQL*FTPASCTFLLP Trigger: GGGAAGCAGAAAGGTACAACTTGCTGGGGTAAAGCAGAGCTGAAATTCAAACCCAAGTGACCCTGACCCCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000486420.1 ENST00000489240.1 ENST00000492588.1 |
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| CDS GCA 72 bp | TCCTCAGCCCTCCACGACCTTCTCTCCAGGATTGACTaGTGTGCTTATCTGAGTGCTGTTATGTTTCCCCAT | + |
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Preference number: 6 (lower is better) Translates to: SSALHDLLSRID*CAYLSAVMFPH Trigger: ATGGGGAAACATAACAGCACTCAGATAAGCACAGCAGTCAATCCTGGAGAGAAGGTCGTGGAGGGCTGAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000492588.1 |
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| CDS CCA 72 bp | TCCAGGTTGGTAACAGCCGAAACTCAGGATTGGACTTaGGGGTCAGGGTCACTTGGGTTTGAATTTCAGCTC | + |
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Preference number: 6 (lower is better) Translates to: SRLVTAETQDWT*GSGSLGFEFQL Trigger: GAGCTGAAATTCAAACCCAAGTGACCCTGACCCCCAAGTCCAATCCTGAGTTTCGGCTGTTACCAACCTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000486420.1 ENST00000489240.1 ENST00000492588.1 |
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| CDS CAA 72 bp | CCGAAACTCAGGATTGGACTTGGGGGTCAGGGTCACTaGGGTTTGAATTTCAGCTCTGCTTTACCCCAGCAA | + |
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Preference number: 6 (lower is better) Translates to: PKLRIGLGGQGH*GLNFSSALPQQ Trigger: TTGCTGGGGTAAAGCAGAGCTGAAATTCAAACCCAAGTGACCCTGACCCCCAAGTCCAATCCTGAGTTTCGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000486420.1 ENST00000489240.1 ENST00000492588.1 |
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| CDS TCA 72 bp | TCAGGATTGGACTTGGGGGTCAGGGTCACTTGGGTTTaGATTTCAGCTCTGCTTTACCCCAGCAAGTTGTAC | + |
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Preference number: 6 (lower is better) Translates to: SGLDLGVRVTWV*ISALLYPSKLY Trigger: GTACAACTTGCTGGGGTAAAGCAGAGCTGAAATTCAAACCCAAGTGACCCTGACCCCCAAGTCCAATCCTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000486420.1 ENST00000489240.1 ENST00000492588.1 |
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| CDS CAA 72 bp | CTCAGGATTGGACTTGGGGGTCAGGGTCACTTGGGTTaGAATTTCAGCTCTGCTTTACCCCAGCAAGTTGTA | + |
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Preference number: 6 (lower is better) Translates to: LRIGLGGQGHLG*NFSSALPQQVV Trigger: TACAACTTGCTGGGGTAAAGCAGAGCTGAAATTCAAACCCAAGTGACCCTGACCCCCAAGTCCAATCCTGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000486420.1 ENST00000489240.1 ENST00000492588.1 |
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| CDS TCA 72 bp | ACGACCTTCTCTCCAGGATTGACTGCTGTGCTTATCTaGGTGCTGTTATGTTTCCCCATGAAAGATGAACGG | + |
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Preference number: 6 (lower is better) Translates to: TTFSPGLTAVLI*VLLCFPMKDER Trigger: CCGTTCATCTTTCATGGGGAAACATAACAGCACTCAGATAAGCACAGCAGTCAATCCTGGAGAGAAGGTCGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000492588.1 |
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