Pregenerated sensors for C9ORF152 (Homo sapiens)
Ensembl gene IDs: ENSG00000188959Ensembl transcript IDs: ENST00000400613.5, ENST00000473442.1
Found 127 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCTCCCCAAGGAATGGATATCCAGGACCTCATAGTAATGTCAGAATaGGGCTGCACTGACCAGACAGTCCTCTTCATCCTAAACTGTGGG | + |
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Preference number: 1 (lower is better) Translates to: PPQGMDIQDLIVMSE*GCTDQTVLFILNCG Trigger: CCCACAGTTTAGGATGAAGAGGACTGTCTGGTCAGTGCAGCCCCATTCTGACATTACTATGAGGTCCTGGATATCCATTCCTTGGGGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000400613.5 |
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| 3UTR TCA 90 bp | AATGGATATCCAGGACCTCATAGTAATGTCAGAATGGGGCTGCACTaGCCAGACAGTCCTCTTCATCCTAAACTGTGGGCAATTTGGCCT | + |
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Preference number: 1 (lower is better) Translates to: NGYPGPHSNVRMGLH*PDSPLHPKLWAIWP Trigger: AGGCCAAATTGCCCACAGTTTAGGATGAAGAGGACTGTCTGGTCAGTGCAGCCCCATTCTGACATTACTATGAGGTCCTGGATATCCATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000400613.5 |
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| 3UTR GCA 90 bp | CAAGGAATGGATATCCAGGACCTCATAGTAATGTCAGAATGGGGCTaGACTGACCAGACAGTCCTCTTCATCCTAAACTGTGGGCAATTT | + |
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Preference number: 1 (lower is better) Translates to: QGMDIQDLIVMSEWG*TDQTVLFILNCGQF Trigger: AAATTGCCCACAGTTTAGGATGAAGAGGACTGTCTGGTCAGTGCAGCCCCATTCTGACATTACTATGAGGTCCTGGATATCCATTCCTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000400613.5 |
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| 3UTR CCA 90 bp | TTTTCACAGGTAATGACACTACTAGTTAACAGCTCTGGATGTAGATaGGCAAGACTGGACGGCCATGCAGAGAAAAGAAAGGTGGGAGTG | + |
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Preference number: 1 (lower is better) Translates to: FSQVMTLLVNSSGCR*ARLDGHAEKRKVGV Trigger: CACTCCCACCTTTCTTTTCTCTGCATGGCCGTCCAGTCTTGCCCATCTACATCCAGAGCTGTTAACTAGTAGTGTCATTACCTGTGAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000400613.5 |
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| 3UTR CCA 90 bp | ATGTTCCAAAATTATCCAGTTCCAGGGATGGAGCAGATGTCTTACTaGTCCTCCCCAAGGAATGGATATCCAGGACCTCATAGTAATGTC | + |
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Preference number: 1 (lower is better) Translates to: MFQNYPVPGMEQMSY*SSPRNGYPGPHSNV Trigger: GACATTACTATGAGGTCCTGGATATCCATTCCTTGGGGAGGACCAGTAAGACATCTGCTCCATCCCTGGAACTGGATAATTTTGGAACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000400613.5 |
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| 3UTR TCA 90 bp | TGGGAAGTCTCTTCTTATTGGAAGGGTAAAACCATGTTACCATTGTaGAGTTCGTCTCCCACAATTCCTATAATTAGGTTAGTCCAGTTC | + |
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Preference number: 1 (lower is better) Translates to: WEVSSYWKGKTMLPL*SSSPTIPIIRLVQF Trigger: GAACTGGACTAACCTAATTATAGGAATTGTGGGAGACGAACTTCACAATGGTAACATGGTTTTACCCTTCCAATAAGAAGAGACTTCCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000400613.5 |
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| 3UTR CCA 90 bp | TTTAAAAATATATTTGATCCCAGGAAGGATCTGAGTGATCTAAGTTaGACTAAACAGGAGGCAGTCTATAGGGAATGTGTATTTTTCAAG | + |
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Preference number: 1 (lower is better) Translates to: FKNIFDPRKDLSDLS*TKQEAVYRECVFFK Trigger: CTTGAAAAATACACATTCCCTATAGACTGCCTCCTGTTTAGTCCAACTTAGATCACTCAGATCCTTCCTGGGATCAAATATATTTTTAAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000400613.5 |
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| 3UTR-3UTR TCA 90 bp | GGCAAGACTGGACGGCCATGCAGAGAAAAGAAAGGTGGGAGTGAAACTTTACAGGAATGCCACGCCCATTaGCCCCTGGGCATTGCTAAG | + |
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Preference number: 2 (lower is better) Translates to: GKTGRPCREKKGGSETLQECHAH*PLGIAK Trigger: CTTAGCAATGCCCAGGGGTCAATGGGCGTGGCATTC...CTGTAAAGTTTCACTCCCACCTTTCTTTTCTCTGCATGGCCGTCCAGTCTTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000400613.5 |
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| 3UTR-3UTR TCA 90 bp | CTAGTTAACAGCTCTGGATGTAGATGGGCAAGACTGGACGGCCATGCAGAGAAATTGGGAAGCCCAAATTaGAATGATGTGATCACTGCC | + |
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Preference number: 2 (lower is better) Translates to: LVNSSGCRWARLDGHAEKLGSPN*NDVITA Trigger: GGCAGTGATCACATCATTTCAATTTGGGCTTCCCAA...TTTCTCTGCATGGCCGTCCAGTCTTGCCCATCTACATCCAGAGCTGTTAACTAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000400613.5 |
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| 3UTR-3UTR CCA 90 bp | CTAGTTAACAGCTCTGGATGTAGATGGGCAAGACTGGACGGCCATGCAGAGAAAAAACTGTGGGCAATTTaGCCTGGGAAGTCTCTTCTT | + |
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Preference number: 2 (lower is better) Translates to: LVNSSGCRWARLDGHAEKKLWAI*PGKSLL Trigger: AAGAAGAGACTTCCCAGGCCAAATTGCCCACAGTTT...TTTCTCTGCATGGCCGTCCAGTCTTGCCCATCTACATCCAGAGCTGTTAACTAG 48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENST00000400613.5 |
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| 3UTR-3UTR CCA 90 bp | AATTATCCAGTTCCAGGGATGGAGCAGATGTCTTACTGGTCCTCCCCAAGGAATCTTCATCCTAAACTGTaGGCAATTTGGCCTGGGAAG | + |
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Preference number: 2 (lower is better) Translates to: NYPVPGMEQMSYWSSPRNLHPKL*AIWPGK Trigger: CTTCCCAGGCCAAATTGCCCACAGTTTAGGATGAAG...ATTCCTTGGGGAGGACCAGTAAGACATCTGCTCCATCCCTGGAACTGGATAATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000400613.5 |
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| 3UTR-3UTR TCA 90 bp | CTAGTTAACAGCTCTGGATGTAGATGGGCAAGACTGGACGGCCATGCAGAGAAAACCATGTTACCATTGTaGAGTTCGTCTCCCACAATT | + |
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Preference number: 2 (lower is better) Translates to: LVNSSGCRWARLDGHAEKTMLPL*SSSPTI Trigger: AATTGTGGGAGACGAACTTCACAATGGTAACATGGT...TTTCTCTGCATGGCCGTCCAGTCTTGCCCATCTACATCCAGAGCTGTTAACTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000400613.5 |
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| 3UTR-3UTR CCA 90 bp | TCCCTGGTTTATGTTCCAAAATTATCCAGTTCCAGGGATGGAGCAGATGTCTTACTAGAGACCTCGTTGTaGCTCTGCCTCCTTGGTTCT | + |
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Preference number: 2 (lower is better) Translates to: SLVYVPKLSSSRDGADVLLETSL*LCLLGS Trigger: AGAACCAAGGAGGCAGAGCCACAACGAGGTCTCTAG...TAAGACATCTGCTCCATCCCTGGAACTGGATAATTTTGGAACATAAACCAGGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000400613.5 |
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| 3UTR-3UTR GCA 90 bp | ACAAAAGGAATGACAATCCCCAAATTTGAGTGGATTTCTGGGTGGTTCAAGGAAATGTCAGAATGGGGCTaGACTGACCAGACAGTCCTC | + |
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Preference number: 2 (lower is better) Translates to: TKGMTIPKFEWISGWFKEMSEWG*TDQTVL Trigger: GAGGACTGTCTGGTCAGTGCAGCCCCATTCTGACAT...TTCCTTGAACCACCCAGAAATCCACTCAAATTTGGGGATTGTCATTCCTTTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000400613.5 |
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| 3UTR-3UTR TCA 90 bp | ACAAAAGGAATGACAATCCCCAAATTTGAGTGGATTTCTGGGTGGTTCAAGGAATACAGAGAAAGCACCTaGGATGAGGGAAAGGCACCT | + |
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Preference number: 2 (lower is better) Translates to: TKGMTIPKFEWISGWFKEYREST*DEGKAP Trigger: AGGTGCCTTTCCCTCATCTCAGGTGCTTTCTCTGTA...TTCCTTGAACCACCCAGAAATCCACTCAAATTTGGGGATTGTCATTCCTTTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000400613.5 |
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| 3UTR-3UTR CCA 90 bp | TCCCTGGTTTATGTTCCAAAATTATCCAGTTCCAGGGATGGAGCAGATGTCTTAGTGGCTCTGCCTCCTTaGTTCTTCTATAAGGCCATA | + |
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Preference number: 2 (lower is better) Translates to: SLVYVPKLSSSRDGADVLVALPP*FFYKAI Trigger: TATGGCCTTATAGAAGAACCAAGGAGGCAGAGCCAC...TAAGACATCTGCTCCATCCCTGGAACTGGATAATTTTGGAACATAAACCAGGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000400613.5 |
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| 3UTR-3UTR CCA 90 bp | ATGAGAAATCATCAGAAGACATTGAAAACAAGAATGCCACGCCCATTGACCCCTATCCAGTTCCAGGGATaGAGCAGATGTCTTACTGGT | + |
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Preference number: 2 (lower is better) Translates to: MRNHQKTLKTRMPRPLTPIQFQG*SRCLTG Trigger: ACCAGTAAGACATCTGCTCCATCCCTGGAACTGGAT...AGGGGTCAATGGGCGTGGCATTCTTGTTTTCAATGTCTTCTGATGATTTCTCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000400613.5 |
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| 3UTR-3UTR CCA 90 bp | ACAAAAGGAATGACAATCCCCAAATTTGAGTGGATTTCTGGGTGGTTCAAGGAACTCACCTTCATACCCTaGGTGACCATACTTTGGGAA | + |
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Preference number: 2 (lower is better) Translates to: TKGMTIPKFEWISGWFKELTFIP*VTILWE Trigger: TTCCCAAAGTATGGTCACCCAGGGTATGAAGGTGAG...TTCCTTGAACCACCCAGAAATCCACTCAAATTTGGGGATTGTCATTCCTTTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000400613.5 |
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| 3UTR-3UTR CCA 90 bp | ACAAAAGGAATGACAATCCCCAAATTTGAGTGGATTTCTGGGTGGTTCAAGGAAATAGTAATGTCAGAATaGGGCTGCACTGACCAGACA | + |
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Preference number: 2 (lower is better) Translates to: TKGMTIPKFEWISGWFKEIVMSE*GCTDQT Trigger: TGTCTGGTCAGTGCAGCCCCATTCTGACATTACTAT...TTCCTTGAACCACCCAGAAATCCACTCAAATTTGGGGATTGTCATTCCTTTTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000400613.5 |
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| 3UTR-3UTR TCA 90 bp | ACAAAAGGAATGACAATCCCCAAATTTGAGTGGATTTCTGGGTGGTTCAAGGAAATCATCAGAAGACATTaGAAACAAGAATGCCACGCC | + |
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Preference number: 2 (lower is better) Translates to: TKGMTIPKFEWISGWFKEIIRRH*KQECHA Trigger: GGCGTGGCATTCTTGTTTTCAATGTCTTCTGATGAT...TTCCTTGAACCACCCAGAAATCCACTCAAATTTGGGGATTGTCATTCCTTTTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000400613.5 |
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| 3UTR-3UTR TCA 90 bp | ACAAAAGGAATGACAATCCCCAAATTTGAGTGGATTTCTGGGTGGTTCAAGGAAACCAGAAAAAGCATCTaGATTCTCAGAGCTTGTCTT | + |
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Preference number: 2 (lower is better) Translates to: TKGMTIPKFEWISGWFKETRKSI*ILRACL Trigger: AAGACAAGCTCTGAGAATTCAGATGCTTTTTCTGGT...TTCCTTGAACCACCCAGAAATCCACTCAAATTTGGGGATTGTCATTCCTTTTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000400613.5 |
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| 3UTR-3UTR TCA 90 bp | GAACTTAATTTGCAGAGAGAGAGAGAGAGAAAAGATAGGCAGGAAGGCAGGAAACAAATTGAAATGATGTaGTCACTGCCAATGAGTGTT | + |
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Preference number: 2 (lower is better) Translates to: ELNLQRERERKDRQEGRKQIEMM*SLPMSV Trigger: AACACTCATTGGCAGTGATCACATCATTTCAATTTG...TTTCCTGCCTTCCTGCCTATCTTTTCTCTCTCTCTCTCTCTGCAAATTAAGTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000400613.5 |
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| 3UTR-3UTR CCA 90 bp | ATGAGAAATCATCAGAAGACATTGAAAACAAGAATGCCACGCCCATTGACCCCTGAAGTCTCTTCTTATTaGAAGGGTAAAACCATGTTA | + |
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Preference number: 2 (lower is better) Translates to: MRNHQKTLKTRMPRPLTPEVSSY*KGKTML Trigger: TAACATGGTTTTACCCTTCCAATAAGAAGAGACTTC...AGGGGTCAATGGGCGTGGCATTCTTGTTTTCAATGTCTTCTGATGATTTCTCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000400613.5 |
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| 3UTR CCA 72 bp | CTCATAGCTAGAGACCTCGTTGTGGCTCTGCCTCCTTaGTTCTTCTATAAGGCCATAGGTGGCCTCAAGGTC | + |
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Preference number: 3 (lower is better) Translates to: LIARDLVVALPP*FFYKAIGGLKV Trigger: GACCTTGAGGCCACCTATGGCCTTATAGAAGAACCAAGGAGGCAGAGCCACAACGAGGTCTCTAGCTATGAG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000400613.5 |
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| 3UTR TCA 72 bp | CCAGGACCTCATAGTAATGTCAGAATGGGGCTGCACTaGCCAGACAGTCCTCTTCATCCTAAACTGTGGGCA | + |
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Preference number: 3 (lower is better) Translates to: PGPHSNVRMGLH*PDSPLHPKLWA Trigger: TGCCCACAGTTTAGGATGAAGAGGACTGTCTGGTCAGTGCAGCCCCATTCTGACATTACTATGAGGTCCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000400613.5 |
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| 3UTR CCA 72 bp | AATTATCCAGTTCCAGGGATGGAGCAGATGTCTTACTaGTCCTCCCCAAGGAATGGATATCCAGGACCTCAT | + |
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Preference number: 3 (lower is better) Translates to: NYPVPGMEQMSY*SSPRNGYPGPH Trigger: ATGAGGTCCTGGATATCCATTCCTTGGGGAGGACCAGTAAGACATCTGCTCCATCCCTGGAACTGGATAATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000400613.5 |
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| 3UTR CCA 72 bp | CTGGGCATTGCTAAGGCATTCTGTTGGCTAGGTCCCTaGTTTATGTTCCAAAATTATCCAGTTCCAGGGATG | + |
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Preference number: 3 (lower is better) Translates to: LGIAKAFCWLGP*FMFQNYPVPGM Trigger: CATCCCTGGAACTGGATAATTTTGGAACATAAACCAGGGACCTAGCCAACAGAATGCCTTAGCAATGCCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000400613.5 |
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| 3UTR CCA 72 bp | CCAGACAGTCCTCTTCATCCTAAACTGTGGGCAATTTaGCCTGGGAAGTCTCTTCTTATTGGAAGGGTAAAA | + |
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Preference number: 3 (lower is better) Translates to: PDSPLHPKLWAI*PGKSLLIGRVK Trigger: TTTTACCCTTCCAATAAGAAGAGACTTCCCAGGCCAAATTGCCCACAGTTTAGGATGAAGAGGACTGTCTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000400613.5 |
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| 3UTR CCA 72 bp | GTAATGACACTACTAGTTAACAGCTCTGGATGTAGATaGGCAAGACTGGACGGCCATGCAGAGAAAAGAAAG | + |
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Preference number: 3 (lower is better) Translates to: VMTLLVNSSGCR*ARLDGHAEKRK Trigger: CTTTCTTTTCTCTGCATGGCCGTCCAGTCTTGCCCATCTACATCCAGAGCTGTTAACTAGTAGTGTCATTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000400613.5 |
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| 3UTR-3UTR CAA 90 bp | AAGGCATTCTGTTGGCTAGGTCCCTGGTTTATGTTCCAAAATTATCCAGTTCCAAGGTTAGTCCAGTTCTaGCTCATAGCTAGAGACCTC | + |
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Preference number: 3 (lower is better) Translates to: KAFCWLGPWFMFQNYPVPRLVQF*LIARDL Trigger: GAGGTCTCTAGCTATGAGCAAGAACTGGACTAACCT...TGGAACTGGATAATTTTGGAACATAAACCAGGGACCTAGCCAACAGAATGCCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000400613.5 |
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| 3UTR CCA 72 bp | ATATTTGATCCCAGGAAGGATCTGAGTGATCTAAGTTaGACTAAACAGGAGGCAGTCTATAGGGAATGTGTA | + |
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Preference number: 3 (lower is better) Translates to: IFDPRKDLSDLS*TKQEAVYRECV Trigger: TACACATTCCCTATAGACTGCCTCCTGTTTAGTCCAACTTAGATCACTCAGATCCTTCCTGGGATCAAATAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000400613.5 |
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| 3UTR TCA 72 bp | TCTTCTTATTGGAAGGGTAAAACCATGTTACCATTGTaGAGTTCGTCTCCCACAATTCCTATAATTAGGTTA | + |
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Preference number: 3 (lower is better) Translates to: SSYWKGKTMLPL*SSSPTIPIIRL Trigger: TAACCTAATTATAGGAATTGTGGGAGACGAACTTCACAATGGTAACATGGTTTTACCCTTCCAATAAGAAGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000400613.5 |
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| CDS-3UTR TCA 90 bp | AGAGACCTCGTTGTGGCTCTGCCTCCTTGGTTCTTCTATAAGGCCATAGGTGGCGCAGGAACTGGATGCTaGGTGGGGGCCCTTTCCCAG | + |
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Preference number: 4 (lower is better) Translates to: RDLVVALPPWFFYKAIGGAGTGC*VGALSQ Trigger: CTGGGAAAGGGCCCCCACTCAGCATCCAGTTCCTGC...GCCACCTATGGCCTTATAGAAGAACCAAGGAGGCAGAGCCACAACGAGGTCTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000400613.5 |
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| CDS-3UTR TCA 90 bp | GGCAAGACTGGACGGCCATGCAGAGAAAAGAAAGGTGGGAGTGAAACTTTACAGTTCCCAGTGCCACGGTaGAGTCTCCCCTTTCCTGGC | + |
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Preference number: 4 (lower is better) Translates to: GKTGRPCREKKGGSETLQFPVPR*SLPFPG Trigger: GCCAGGAAAGGGGAGACTTCACCGTGGCACTGGGAA...CTGTAAAGTTTCACTCCCACCTTTCTTTTCTCTGCATGGCCGTCCAGTCTTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000400613.5 |
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| CDS-3UTR CCA 90 bp | ATTAGGTTAGTCCAGTTCTTGCTCATAGCTAGAGACCTCGTTGTGGCTCTGCCTTGGGCTCGCAGGAACTaGATGCTGAGTGGGGGCCCT | + |
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Preference number: 4 (lower is better) Translates to: IRLVQFLLIARDLVVALPWARRN*MLSGGP Trigger: AGGGCCCCCACTCAGCATCCAGTTCCTGCGAGCCCA...AGGCAGAGCCACAACGAGGTCTCTAGCTATGAGCAAGAACTGGACTAACCTAAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000400613.5 |
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| CDS-3UTR CCA 90 bp | CTAGTTAACAGCTCTGGATGTAGATGGGCAAGACTGGACGGCCATGCAGAGAAATGTGCCATGGAGACTTaGGGGCCTGAAGGCAGCCCT | + |
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Preference number: 4 (lower is better) Translates to: LVNSSGCRWARLDGHAEKCAMET*GPEGSP Trigger: AGGGCTGCCTTCAGGCCCCCAAGTCTCCATGGCACA...TTTCTCTGCATGGCCGTCCAGTCTTGCCCATCTACATCCAGAGCTGTTAACTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000400613.5 |
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| CDS-3UTR CCA 90 bp | GGCAAGACTGGACGGCCATGCAGAGAAAAGAAAGGTGGGAGTGAAACTTTACAGATTGCCCACCTGGCATaGAAGCTGGGCAGCCTCTGG | + |
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Preference number: 4 (lower is better) Translates to: GKTGRPCREKKGGSETLQIAHLA*KLGSLW Trigger: CCAGAGGCTGCCCAGCTTCCATGCCAGGTGGGCAAT...CTGTAAAGTTTCACTCCCACCTTTCTTTTCTCTGCATGGCCGTCCAGTCTTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000400613.5 |
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| CDS-3UTR CCA 90 bp | AGAGACCTCGTTGTGGCTCTGCCTCCTTGGTTCTTCTATAAGGCCATAGGTGGCAGGTTCCGGGCAGCTTaGGAGATCCTGGGTGTTTTC | + |
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Preference number: 4 (lower is better) Translates to: RDLVVALPPWFFYKAIGGRFRAA*EILGVF Trigger: GAAAACACCCAGGATCTCCCAAGCTGCCCGGAACCT...GCCACCTATGGCCTTATAGAAGAACCAAGGAGGCAGAGCCACAACGAGGTCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000400613.5 |
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| CDS-3UTR CCA 90 bp | CAGATGTCTTACTGGTCCTCCCCAAGGAATGGATATCCAGGACCTCATAGTAATGAACTGGATGCTGAGTaGGGGCCCTTTCCCAGGGGC | + |
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Preference number: 4 (lower is better) Translates to: QMSYWSSPRNGYPGPHSNELDAE*GPFPRG Trigger: GCCCCTGGGAAAGGGCCCCCACTCAGCATCCAGTTC...ATTACTATGAGGTCCTGGATATCCATTCCTTGGGGAGGACCAGTAAGACATCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000400613.5 |
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| CDS-3UTR CCA 90 bp | AATTATCCAGTTCCAGGGATGGAGCAGATGTCTTACTGGTCCTCCCCAAGGAATACCTGGCATGGAAGCTaGGCAGCCTCTGGGATTCCG | + |
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Preference number: 4 (lower is better) Translates to: NYPVPGMEQMSYWSSPRNTWHGS*AASGIP Trigger: CGGAATCCCAGAGGCTGCCCAGCTTCCATGCCAGGT...ATTCCTTGGGGAGGACCAGTAAGACATCTGCTCCATCCCTGGAACTGGATAATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000400613.5 |
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| CDS-3UTR CCA 90 bp | AGAGACCTCGTTGTGGCTCTGCCTCCTTGGTTCTTCTATAAGGCCATAGGTGGCAGCTCTGGATGTAGATaGGCAAGACTGGACGGCCAT | + |
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Preference number: 4 (lower is better) Translates to: RDLVVALPPWFFYKAIGGSSGCR*ARLDGH Trigger: ATGGCCGTCCAGTCTTGCCCATCTACATCCAGAGCT...GCCACCTATGGCCTTATAGAAGAACCAAGGAGGCAGAGCCACAACGAGGTCTCT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000400613.5 |
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| CDS-3UTR TCA 90 bp | ATTAGGTTAGTCCAGTTCTTGCTCATAGCTAGAGACCTCGTTGTGGCTCTGCCTGAATGCCACGCCCATTaGCCCCTGGGCATTGCTAAG | + |
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Preference number: 4 (lower is better) Translates to: IRLVQFLLIARDLVVALPECHAH*PLGIAK Trigger: CTTAGCAATGCCCAGGGGTCAATGGGCGTGGCATTC...AGGCAGAGCCACAACGAGGTCTCTAGCTATGAGCAAGAACTGGACTAACCTAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000400613.5 |
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| CDS-3UTR GCA 90 bp | CCCCTGGGCATTGCTAAGGCATTCTGTTGGCTAGGTCCCTGGTTTATGTTCCAACAATGCATCTCCAGGTaGGTGTGCCATGGAGACTTG | + |
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Preference number: 4 (lower is better) Translates to: PLGIAKAFCWLGPWFMFQQCISR*VCHGDL Trigger: CAAGTCTCCATGGCACACGCACCTGGAGATGCATTG...TTGGAACATAAACCAGGGACCTAGCCAACAGAATGCCTTAGCAATGCCCAGGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000400613.5 |
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| CDS-3UTR CCA 90 bp | CCCCTGGGCATTGCTAAGGCATTCTGTTGGCTAGGTCCCTGGTTTATGTTCCAACTAGAGACCTCGTTGTaGCTCTGCCTCCTTGGTTCT | + |
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Preference number: 4 (lower is better) Translates to: PLGIAKAFCWLGPWFMFQLETSL*LCLLGS Trigger: AGAACCAAGGAGGCAGAGCCACAACGAGGTCTCTAG...TTGGAACATAAACCAGGGACCTAGCCAACAGAATGCCTTAGCAATGCCCAGGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000400613.5 |
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| CDS-3UTR TCA 90 bp | CTAGTTAACAGCTCTGGATGTAGATGGGCAAGACTGGACGGCCATGCAGAGAAAAGAATGGGGCTGCACTaGCCAGACAGTCCTCTTCAT | + |
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Preference number: 4 (lower is better) Translates to: LVNSSGCRWARLDGHAEKRMGLH*PDSPLH Trigger: ATGAAGAGGACTGTCTGGTCAGTGCAGCCCCATTCT...TTTCTCTGCATGGCCGTCCAGTCTTGCCCATCTACATCCAGAGCTGTTAACTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000400613.5 |
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| CDS-3UTR GCA 90 bp | CAGATGTCTTACTGGTCCTCCCCAAGGAATGGATATCCAGGACCTCATAGTAATTGGGCCTGGGTCCTCTaGTGCCTCTTCAAGCCTTCA | + |
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Preference number: 4 (lower is better) Translates to: QMSYWSSPRNGYPGPHSNWAWVL*CLFKPS Trigger: TGAAGGCTTGAAGAGGCAGCAGAGGACCCAGGCCCA...ATTACTATGAGGTCCTGGATATCCATTCCTTGGGGAGGACCAGTAAGACATCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000400613.5 |
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| CDS-3UTR GCA 90 bp | AGACACAAAATGGTAGGTAGCATTGATCTCACCTTCATACCCTGGGTGACCATAATCTCCAGGTGCGTGTaGCATGGAGACTTGGGGGCC | + |
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Preference number: 4 (lower is better) Translates to: RHKMVGSIDLTFIPWVTIISRCV*HGDLGA Trigger: GGCCCCCAAGTCTCCATGGCACACGCACCTGGAGAT...TATGGTCACCCAGGGTATGAAGGTGAGATCAATGCTACCTACCATTTTGTGTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000400613.5 |
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| CDS-3UTR GCA 90 bp | CTAGTTAACAGCTCTGGATGTAGATGGGCAAGACTGGACGGCCATGCAGAGAAAATGTCAGAATGGGGCTaGACTGACCAGACAGTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LVNSSGCRWARLDGHAEKMSEWG*TDQTVL Trigger: GAGGACTGTCTGGTCAGTGCAGCCCCATTCTGACAT...TTTCTCTGCATGGCCGTCCAGTCTTGCCCATCTACATCCAGAGCTGTTAACTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000400613.5 |
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| CDS-3UTR CCA 90 bp | CAGTTCCAGGGATGGAGCAGATGTCTTACTGGTCCTCCCCAAGGAATGGATATCTTCAAGCCTTCATACTaGGCTCGCAGGAACTGGATG | + |
|
Preference number: 4 (lower is better) Translates to: QFQGWSRCLTGPPQGMDIFKPSY*ARRNWM Trigger: CATCCAGTTCCTGCGAGCCCAGTATGAAGGCTTGAA...GATATCCATTCCTTGGGGAGGACCAGTAAGACATCTGCTCCATCCCTGGAACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000400613.5 |
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| CDS-3UTR CCA 90 bp | CAGTTCCAGGGATGGAGCAGATGTCTTACTGGTCCTCCCCAAGGAATGGATATCTCCACTGCCTTTGTTTaGGTATTGCCCACCTGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: QFQGWSRCLTGPPQGMDISTAFV*VLPTWH Trigger: ATGCCAGGTGGGCAATACCCAAACAAAGGCAGTGGA...GATATCCATTCCTTGGGGAGGACCAGTAAGACATCTGCTCCATCCCTGGAACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000400613.5 |
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| CDS-3UTR CCA 90 bp | GGCAAGACTGGACGGCCATGCAGAGAAAAGAAAGGTGGGAGTGAAACTTTACAGCAGCTTGGGAGATCCTaGGTGTTTTCCTCTGGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: GKTGRPCREKKGGSETLQQLGRS*VFSSGE Trigger: TTCCCCAGAGGAAAACACCCAGGATCTCCCAAGCTG...CTGTAAAGTTTCACTCCCACCTTTCTTTTCTCTGCATGGCCGTCCAGTCTTGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000400613.5 |
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| CDS-3UTR CCA 90 bp | AGAGACCTCGTTGTGGCTCTGCCTCCTTGGTTCTTCTATAAGGCCATAGGTGGCCTCACCTTCATACCCTaGGTGACCATACTTTGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: RDLVVALPPWFFYKAIGGLTFIP*VTILWE Trigger: TTCCCAAAGTATGGTCACCCAGGGTATGAAGGTGAG...GCCACCTATGGCCTTATAGAAGAACCAAGGAGGCAGAGCCACAACGAGGTCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000400613.5 |
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| CDS-3UTR GCA 90 bp | TCCCTGGTTTATGTTCCAAAATTATCCAGTTCCAGGGATGGAGCAGATGTCTTAAAAGGCAAGCCCAGCTaGTCAGAGCCCTTCAGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: SLVYVPKLSSSRDGADVLKGKPS*SEPFRG Trigger: CCCCCTGAAGGGCTCTGAGCAGCTGGGCTTGCCTTT...TAAGACATCTGCTCCATCCCTGGAACTGGATAATTTTGGAACATAAACCAGGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000400613.5 |
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| CDS-3UTR GCA 90 bp | CTAGTTAACAGCTCTGGATGTAGATGGGCAAGACTGGACGGCCATGCAGAGAAACCTTTGTTTGGGTATTaGCCACCTGGCATGGAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LVNSSGCRWARLDGHAEKPLFGY*PPGMEA Trigger: AGCTTCCATGCCAGGTGGGCAATACCCAAACAAAGG...TTTCTCTGCATGGCCGTCCAGTCTTGCCCATCTACATCCAGAGCTGTTAACTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000400613.5 |
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| CDS-3UTR CCA 90 bp | GAACTTAATTTGCAGAGAGAGAGAGAGAGAAAAGATAGGCAGGAAGGCAGGAAACAGGTGCGTGTGCCATaGAGACTTGGGGGCCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: ELNLQRERERKDRQEGRKQVRVP*RLGGLK Trigger: CTTCAGGCCCCCAAGTCTCCATGGCACACGCACCTG...TTTCCTGCCTTCCTGCCTATCTTTTCTCTCTCTCTCTCTCTGCAAATTAAGTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000400613.5 |
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| CDS-3UTR CCA 90 bp | GAACTTAATTTGCAGAGAGAGAGAGAGAGAAAAGATAGGCAGGAAGGCAGGAAATGGGTATTGCCCACCTaGCATGGAAGCTGGGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: ELNLQRERERKDRQEGRKWVLPT*HGSWAA Trigger: GGCTGCCCAGCTTCCATGCCAGGTGGGCAATACCCA...TTTCCTGCCTTCCTGCCTATCTTTTCTCTCTCTCTCTCTCTGCAAATTAAGTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000400613.5 |
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| CDS-3UTR TCA 90 bp | ATTAGGTTAGTCCAGTTCTTGCTCATAGCTAGAGACCTCGTTGTGGCTCTGCCTCTCTTCCAGGGACAGTaGGCTTCTTCTCTCCTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: IRLVQFLLIARDLVVALPLFQGQ*ASSLLV Trigger: AACAAGGAGAGAAGAAGCTCACTGTCCCTGGAAGAG...AGGCAGAGCCACAACGAGGTCTCTAGCTATGAGCAAGAACTGGACTAACCTAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000400613.5 |
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| CDS-3UTR TCA 90 bp | AGAGACCTCGTTGTGGCTCTGCCTCCTTGGTTCTTCTATAAGGCCATAGGTGGCACCATGTTACCATTGTaGAGTTCGTCTCCCACAATT | + |
|
Preference number: 4 (lower is better) Translates to: RDLVVALPPWFFYKAIGGTMLPL*SSSPTI Trigger: AATTGTGGGAGACGAACTTCACAATGGTAACATGGT...GCCACCTATGGCCTTATAGAAGAACCAAGGAGGCAGAGCCACAACGAGGTCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000400613.5 |
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| CDS-3UTR TCA 90 bp | AGACACAAAATGGTAGGTAGCATTGATCTCACCTTCATACCCTGGGTGACCATACCTTCATACCCTGGGTaGCCATACTTTGGGAAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: RHKMVGSIDLTFIPWVTIPSYPG*PYFGKP Trigger: GGGCTTCCCAAAGTATGGTCACCCAGGGTATGAAGG...TATGGTCACCCAGGGTATGAAGGTGAGATCAATGCTACCTACCATTTTGTGTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000400613.5 |
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| CDS-3UTR TCA 90 bp | AATTATCCAGTTCCAGGGATGGAGCAGATGTCTTACTGGTCCTCCCCAAGGAATTACAGAGAAAGCACCTaGGATGAGGGAAAGGCACCT | + |
|
Preference number: 4 (lower is better) Translates to: NYPVPGMEQMSYWSSPRNYREST*DEGKAP Trigger: AGGTGCCTTTCCCTCATCTCAGGTGCTTTCTCTGTA...ATTCCTTGGGGAGGACCAGTAAGACATCTGCTCCATCCCTGGAACTGGATAATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000400613.5 |
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| CDS-3UTR GCA 90 bp | AATTATCCAGTTCCAGGGATGGAGCAGATGTCTTACTGGTCCTCCCCAAGGAATGTTTGGACCAAACAATaGATCTCCAGGTGCGTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: NYPVPGMEQMSYWSSPRNVWTKQ*ISRCVC Trigger: GCACACGCACCTGGAGATGCATTGTTTGGTCCAAAC...ATTCCTTGGGGAGGACCAGTAAGACATCTGCTCCATCCCTGGAACTGGATAATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000400613.5 |
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| CDS-3UTR GCA 90 bp | ATTAGGTTAGTCCAGTTCTTGCTCATAGCTAGAGACCTCGTTGTGGCTCTGCCTAAGACTGGACGGCCATaGAGAGAAAAGAAAGGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: IRLVQFLLIARDLVVALPKTGRP*REKKGG Trigger: CCCACCTTTCTTTTCTCTGCATGGCCGTCCAGTCTT...AGGCAGAGCCACAACGAGGTCTCTAGCTATGAGCAAGAACTGGACTAACCTAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000400613.5 |
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| CDS-3UTR CCA 90 bp | CAGATGTCTTACTGGTCCTCCCCAAGGAATGGATATCCAGGACCTCATAGTAATTGTGTTTCCTCCTTTTaGAAGCACCAGGAGGTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: QMSYWSSPRNGYPGPHSNCVSSF*KHQEVG Trigger: GCCCACCTCCTGGTGCTTCCAAAAGGAGGAAACACA...ATTACTATGAGGTCCTGGATATCCATTCCTTGGGGAGGACCAGTAAGACATCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000400613.5 |
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| CDS-3UTR CCA 90 bp | CCCCTGGGCATTGCTAAGGCATTCTGTTGGCTAGGTCCCTGGTTTATGTTCCAATTTGCCAGACCTGTGTaGGTTCTTTATGGAAAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: PLGIAKAFCWLGPWFMFQFARPV*VLYGKR Trigger: CCTCTTTCCATAAAGAACCCACACAGGTCTGGCAAA...TTGGAACATAAACCAGGGACCTAGCCAACAGAATGCCTTAGCAATGCCCAGGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000400613.5 |
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| CDS-3UTR GCA 90 bp | CTAGTTAACAGCTCTGGATGTAGATGGGCAAGACTGGACGGCCATGCAGAGAAACAGATCCCACAAGCTTaGCCCTATGATGTACTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: LVNSSGCRWARLDGHAEKQIPQA*PYDVLD Trigger: ATCAAGTACATCATAGGGGCAAGCTTGTGGGATCTG...TTTCTCTGCATGGCCGTCCAGTCTTGCCCATCTACATCCAGAGCTGTTAACTAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000400613.5 |
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| CDS-3UTR CCA 90 bp | CTAGTTAACAGCTCTGGATGTAGATGGGCAAGACTGGACGGCCATGCAGAGAAAAAATGGATAGTAAGCTaGTTTGCCAGACCTGTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LVNSSGCRWARLDGHAEKKWIVS*FARPVW Trigger: CCACACAGGTCTGGCAAACCAGCTTACTATCCATTT...TTTCTCTGCATGGCCGTCCAGTCTTGCCCATCTACATCCAGAGCTGTTAACTAG 48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENST00000400613.5 |
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| CDS-3UTR CCA 90 bp | GGCAAGACTGGACGGCCATGCAGAGAAAAGAAAGGTGGGAGTGAAACTTTACAGATAGTAATGTCAGAATaGGGCTGCACTGACCAGACA | + |
|
Preference number: 4 (lower is better) Translates to: GKTGRPCREKKGGSETLQIVMSE*GCTDQT Trigger: TGTCTGGTCAGTGCAGCCCCATTCTGACATTACTAT...CTGTAAAGTTTCACTCCCACCTTTCTTTTCTCTGCATGGCCGTCCAGTCTTGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000400613.5 |
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| CDS-3UTR CCA 90 bp | ATTAGGTTAGTCCAGTTCTTGCTCATAGCTAGAGACCTCGTTGTGGCTCTGCCTATCCAGTTCCAGGGATaGAGCAGATGTCTTACTGGT | + |
|
Preference number: 4 (lower is better) Translates to: IRLVQFLLIARDLVVALPIQFQG*SRCLTG Trigger: ACCAGTAAGACATCTGCTCCATCCCTGGAACTGGAT...AGGCAGAGCCACAACGAGGTCTCTAGCTATGAGCAAGAACTGGACTAACCTAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000400613.5 |
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| CDS-3UTR CCA 90 bp | CTAGTTAACAGCTCTGGATGTAGATGGGCAAGACTGGACGGCCATGCAGAGAAAGAGTGGATTTCTGGGTaGTTCAAGGAAGCTTCTACA | + |
|
Preference number: 4 (lower is better) Translates to: LVNSSGCRWARLDGHAEKEWISG*FKEAST Trigger: TGTAGAAGCTTCCTTGAACCACCCAGAAATCCACTC...TTTCTCTGCATGGCCGTCCAGTCTTGCCCATCTACATCCAGAGCTGTTAACTAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000400613.5 |
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| CDS-3UTR CCA 90 bp | CAGTTCCAGGGATGGAGCAGATGTCTTACTGGTCCTCCCCAAGGAATGGATATCATCCCCAAATTTGAGTaGATTTCTGGGTGGTTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: QFQGWSRCLTGPPQGMDIIPKFE*ISGWFK Trigger: CTTGAACCACCCAGAAATCCACTCAAATTTGGGGAT...GATATCCATTCCTTGGGGAGGACCAGTAAGACATCTGCTCCATCCCTGGAACTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000400613.5 |
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| CDS-3UTR TCA 90 bp | TCCCTGGTTTATGTTCCAAAATTATCCAGTTCCAGGGATGGAGCAGATGTCTTACCCTCAGCCATTAAGTaGGACCTAAGCTGCCAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SLVYVPKLSSSRDGADVLPSAIK*DLSCQK Trigger: CTTCTGGCAGCTTAGGTCTCACTTAATGGCTGAGGG...TAAGACATCTGCTCCATCCCTGGAACTGGATAATTTTGGAACATAAACCAGGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000400613.5 |
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| CDS-3UTR TCA 90 bp | TCCCTGGTTTATGTTCCAAAATTATCCAGTTCCAGGGATGGAGCAGATGTCTTATCAGGAGGGAGCCTTTaGTCAGATCCCACAAGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: SLVYVPKLSSSRDGADVLSGGSL*SDPTSL Trigger: CAAGCTTGTGGGATCTGATCAAAGGCTCCCTCCTGA...TAAGACATCTGCTCCATCCCTGGAACTGGATAATTTTGGAACATAAACCAGGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000400613.5 |
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| CDS-3UTR GCA 90 bp | AAGGCATTCTGTTGGCTAGGTCCCTGGTTTATGTTCCAAAATTATCCAGTTCCAGAATCCAATTCCCAGTaGCACGGTGAAGTCTCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: KAFCWLGPWFMFQNYPVPESNSQ*HGEVSP Trigger: AGGGGAGACTTCACCGTGGCACTGGGAATTGGATTC...TGGAACTGGATAATTTTGGAACATAAACCAGGGACCTAGCCAACAGAATGCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000400613.5 |
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| CDS-3UTR CCA 90 bp | CAGATGTCTTACTGGTCCTCCCCAAGGAATGGATATCCAGGACCTCATAGTAATCTTCATCCTAAACTGTaGGCAATTTGGCCTGGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: QMSYWSSPRNGYPGPHSNLHPKL*AIWPGK Trigger: CTTCCCAGGCCAAATTGCCCACAGTTTAGGATGAAG...ATTACTATGAGGTCCTGGATATCCATTCCTTGGGGAGGACCAGTAAGACATCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000400613.5 |
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| CDS-3UTR CCA 90 bp | AAGGCATTCTGTTGGCTAGGTCCCTGGTTTATGTTCCAAAATTATCCAGTTCCAACGCCCATTGACCCCTaGGCATTGCTAAGGCATTCT | + |
|
Preference number: 4 (lower is better) Translates to: KAFCWLGPWFMFQNYPVPTPIDP*ALLRHS Trigger: AGAATGCCTTAGCAATGCCCAGGGGTCAATGGGCGT...TGGAACTGGATAATTTTGGAACATAAACCAGGGACCTAGCCAACAGAATGCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000400613.5 |
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| CDS-3UTR GCA 90 bp | AGACACAAAATGGTAGGTAGCATTGATCTCACCTTCATACCCTGGGTGACCATAATTGACCATCGATTCTaGAGGAGCAGGTGTGTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: RHKMVGSIDLTFIPWVTIIDHRF*RSRCVS Trigger: GGAAACACACCTGCTCCTGCAGAATCGATGGTCAAT...TATGGTCACCCAGGGTATGAAGGTGAGATCAATGCTACCTACCATTTTGTGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000400613.5 |
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| CDS-3UTR CCA 90 bp | ATTAGGTTAGTCCAGTTCTTGCTCATAGCTAGAGACCTCGTTGTGGCTCTGCCTTGTGTGGGTTCTTTATaGAAAGAGGACATTGAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: IRLVQFLLIARDLVVALPCVGSL*KEDIEC Trigger: GCACTCAATGTCCTCTTTCCATAAAGAACCCACACA...AGGCAGAGCCACAACGAGGTCTCTAGCTATGAGCAAGAACTGGACTAACCTAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000400613.5 |
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| CDS-3UTR CCA 90 bp | ATTAGGTTAGTCCAGTTCTTGCTCATAGCTAGAGACCTCGTTGTGGCTCTGCCTCAAGGTCAAGACATCTaGCAGAATAGAAAGCTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: IRLVQFLLIARDLVVALPQGQDI*QNRKLH Trigger: GTGAAGCTTTCTATTCTGCCAGATGTCTTGACCTTG...AGGCAGAGCCACAACGAGGTCTCTAGCTATGAGCAAGAACTGGACTAACCTAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000400613.5 |
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| CDS-3UTR CCA 90 bp | AGACACAAAATGGTAGGTAGCATTGATCTCACCTTCATACCCTGGGTGACCATAGTGGCTCTGCCTCCTTaGTTCTTCTATAAGGCCATA | + |
|
Preference number: 4 (lower is better) Translates to: RHKMVGSIDLTFIPWVTIVALPP*FFYKAI Trigger: TATGGCCTTATAGAAGAACCAAGGAGGCAGAGCCAC...TATGGTCACCCAGGGTATGAAGGTGAGATCAATGCTACCTACCATTTTGTGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000400613.5 |
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| CDS-3UTR CCA 90 bp | AGAGACCTCGTTGTGGCTCTGCCTCCTTGGTTCTTCTATAAGGCCATAGGTGGCGAAGTCTCTTCTTATTaGAAGGGTAAAACCATGTTA | + |
|
Preference number: 4 (lower is better) Translates to: RDLVVALPPWFFYKAIGGEVSSY*KGKTML Trigger: TAACATGGTTTTACCCTTCCAATAAGAAGAGACTTC...GCCACCTATGGCCTTATAGAAGAACCAAGGAGGCAGAGCCACAACGAGGTCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000400613.5 |
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| CDS-3UTR CCA 90 bp | AGACACAAAATGGTAGGTAGCATTGATCTCACCTTCATACCCTGGGTGACCATAGCTAAGGCATTCTGTTaGCTAGGTCCCTGGTTTATG | + |
|
Preference number: 4 (lower is better) Translates to: RHKMVGSIDLTFIPWVTIAKAFC*LGPWFM Trigger: CATAAACCAGGGACCTAGCCAACAGAATGCCTTAGC...TATGGTCACCCAGGGTATGAAGGTGAGATCAATGCTACCTACCATTTTGTGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000400613.5 |
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| CDS-3UTR CCA 90 bp | GAACTTAATTTGCAGAGAGAGAGAGAGAGAAAAGATAGGCAGGAAGGCAGGAAAGTAGATGGGCAAGACTaGACGGCCATGCAGAGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: ELNLQRERERKDRQEGRKVDGQD*TAMQRK Trigger: TTTTCTCTGCATGGCCGTCCAGTCTTGCCCATCTAC...TTTCCTGCCTTCCTGCCTATCTTTTCTCTCTCTCTCTCTCTGCAAATTAAGTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000400613.5 |
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| 3UTR CAA 72 bp | TCTCCCACAATTCCTATAATTAGGTTAGTCCAGTTCTaGCTCATAGCTAGAGACCTCGTTGTGGCTCTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: SPTIPIIRLVQF*LIARDLVVALP Trigger: AGGCAGAGCCACAACGAGGTCTCTAGCTATGAGCAAGAACTGGACTAACCTAATTATAGGAATTGTGGGAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000400613.5 |
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| CDS-3UTR TCA 90 bp | CAGATGTCTTACTGGTCCTCCCCAAGGAATGGATATCCAGGACCTCATAGTAATGAGGACATTGAGTGCTaGATTTTAAGCCAGATTCCA | + |
|
Preference number: 4 (lower is better) Translates to: QMSYWSSPRNGYPGPHSNEDIEC*ILSQIP Trigger: TGGAATCTGGCTTAAAATTCAGCACTCAATGTCCTC...ATTACTATGAGGTCCTGGATATCCATTCCTTGGGGAGGACCAGTAAGACATCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000400613.5 |
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| CDS-3UTR GCA 90 bp | AAGGCATTCTGTTGGCTAGGTCCCTGGTTTATGTTCCAAAATTATCCAGTTCCAGATAGTAAGCTGGTTTaGCAGACCTGTGTGGGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: KAFCWLGPWFMFQNYPVPDSKLV*QTCVGS Trigger: AGAACCCACACAGGTCTGGCAAACCAGCTTACTATC...TGGAACTGGATAATTTTGGAACATAAACCAGGGACCTAGCCAACAGAATGCCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000400613.5 |
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| CDS-3UTR TCA 90 bp | ATTAGGTTAGTCCAGTTCTTGCTCATAGCTAGAGACCTCGTTGTGGCTCTGCCTCAAATTGAAATGATGTaGTCACTGCCAATGAGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: IRLVQFLLIARDLVVALPQIEMM*SLPMSV Trigger: AACACTCATTGGCAGTGATCACATCATTTCAATTTG...AGGCAGAGCCACAACGAGGTCTCTAGCTATGAGCAAGAACTGGACTAACCTAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000400613.5 |
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| CDS-3UTR TCA 90 bp | GAACTTAATTTGCAGAGAGAGAGAGAGAGAAAAGATAGGCAGGAAGGCAGGAAATTGGGAAGCCCAAATTaGAATGATGTGATCACTGCC | + |
|
Preference number: 4 (lower is better) Translates to: ELNLQRERERKDRQEGRKLGSPN*NDVITA Trigger: GGCAGTGATCACATCATTTCAATTTGGGCTTCCCAA...TTTCCTGCCTTCCTGCCTATCTTTTCTCTCTCTCTCTCTCTGCAAATTAAGTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000400613.5 |
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| CDS-3UTR TCA 90 bp | TCCCTGGTTTATGTTCCAAAATTATCCAGTTCCAGGGATGGAGCAGATGTCTTAGACAATCCCCAAATTTaGGTGGATTTCTGGGTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: SLVYVPKLSSSRDGADVLDNPQI*VDFWVV Trigger: AACCACCCAGAAATCCACTCAAATTTGGGGATTGTC...TAAGACATCTGCTCCATCCCTGGAACTGGATAATTTTGGAACATAAACCAGGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000400613.5 |
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| CDS-3UTR CCA 90 bp | TCCCTGGTTTATGTTCCAAAATTATCCAGTTCCAGGGATGGAGCAGATGTCTTAAAACTGTGGGCAATTTaGCCTGGGAAGTCTCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: SLVYVPKLSSSRDGADVLKLWAI*PGKSLL Trigger: AAGAAGAGACTTCCCAGGCCAAATTGCCCACAGTTT...TAAGACATCTGCTCCATCCCTGGAACTGGATAATTTTGGAACATAAACCAGGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000400613.5 |
||
| CDS-3UTR CCA 90 bp | AATTATCCAGTTCCAGGGATGGAGCAGATGTCTTACTGGTCCTCCCCAAGGAATTGTTGGCTAGGTCCCTaGTTTATGTTCCAAAATTAT | + |
|
Preference number: 4 (lower is better) Translates to: NYPVPGMEQMSYWSSPRNCWLGP*FMFQNY Trigger: ATAATTTTGGAACATAAACCAGGGACCTAGCCAACA...ATTCCTTGGGGAGGACCAGTAAGACATCTGCTCCATCCCTGGAACTGGATAATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000400613.5 |
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| CDS-3UTR CCA 90 bp | GAACTTAATTTGCAGAGAGAGAGAGAGAGAAAAGATAGGCAGGAAGGCAGGAAACTGAGTGATCTAAGTTaGACTAAACAGGAGGCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: ELNLQRERERKDRQEGRKLSDLS*TKQEAV Trigger: GACTGCCTCCTGTTTAGTCCAACTTAGATCACTCAG...TTTCCTGCCTTCCTGCCTATCTTTTCTCTCTCTCTCTCTCTGCAAATTAAGTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000400613.5 |
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| CDS-3UTR TCA 90 bp | ATGAGAAATCATCAGAAGACATTGAAAACAAGAATGCCACGCCCATTGACCCCTATCATCAGAAGACATTaGAAACAAGAATGCCACGCC | + |
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Preference number: 4 (lower is better) Translates to: MRNHQKTLKTRMPRPLTPIIRRH*KQECHA Trigger: GGCGTGGCATTCTTGTTTTCAATGTCTTCTGATGAT...AGGGGTCAATGGGCGTGGCATTCTTGTTTTCAATGTCTTCTGATGATTTCTCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000400613.5 |
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| CDS-3UTR TCA 90 bp | GAGCTTGTCTTCTCCAGAATATATGAGAAATCATCAGAAGACATTGAAAACAAGAGAAAGCACCTGAGATaGGGGAAAGGCACCTTAGGT | + |
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Preference number: 4 (lower is better) Translates to: ELVFSRIYEKSSEDIENKRKHLR*GKGTLG Trigger: ACCTAAGGTGCCTTTCCCTCATCTCAGGTGCTTTCT...CTTGTTTTCAATGTCTTCTGATGATTTCTCATATATTCTGGAGAAGACAAGCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000400613.5 |
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| CDS-3UTR GCA 90 bp | GAACTTAATTTGCAGAGAGAGAGAGAGAGAAAAGATAGGCAGGAAGGCAGGAAATCCAGGTCCTTCCATTaGTTGATCCTAAAGTTTAGA | + |
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Preference number: 4 (lower is better) Translates to: ELNLQRERERKDRQEGRKSRSFH*LILKFR Trigger: TCTAAACTTTAGGATCAAGCAATGGAAGGACCTGGA...TTTCCTGCCTTCCTGCCTATCTTTTCTCTCTCTCTCTCTCTGCAAATTAAGTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000400613.5 |
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| CDS-3UTR GCA 90 bp | GAACTTAATTTGCAGAGAGAGAGAGAGAGAAAAGATAGGCAGGAAGGCAGGAAAGTAGGAGCATTTCTTTaGCTCTTTTGTTCAGGATCT | + |
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Preference number: 4 (lower is better) Translates to: ELNLQRERERKDRQEGRKVGAFL*LFCSGS Trigger: AGATCCTGAACAAAAGAGGCAAAGAAATGCTCCTAC...TTTCCTGCCTTCCTGCCTATCTTTTCTCTCTCTCTCTCTCTGCAAATTAAGTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000400613.5 |
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| CDS-3UTR GCA 90 bp | GAGCTTGTCTTCTCCAGAATATATGAGAAATCATCAGAAGACATTGAAAACAAGACCTCGTTGTGGCTCTaGCTCCTTGGTTCTTCTATA | + |
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Preference number: 4 (lower is better) Translates to: ELVFSRIYEKSSEDIENKTSLWL*LLGSSI Trigger: TATAGAAGAACCAAGGAGGCAGAGCCACAACGAGGT...CTTGTTTTCAATGTCTTCTGATGATTTCTCATATATTCTGGAGAAGACAAGCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000400613.5 |
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| CDS CCA 90 bp | ACGCTGAGCCATATAAGCCCAGGTTCCGGGCAGCTTGGGAGATCCTaGGTGTTTTCCTCTGGGGAAATGGATAGTAAGCTGGTTTGCCAG | + |
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Preference number: 5 (lower is better) Translates to: TLSHISPGSGQLGRS*VFSSGEMDSKLVCQ Trigger: CTGGCAAACCAGCTTACTATCCATTTCCCCAGAGGAAAACACCCAGGATCTCCCAAGCTGCCCGGAACCTGGGCTTATATGGCTCAGCGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000400613.5 |
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| CDS-3UTR CAA 90 bp | CCCCTGGGCATTGCTAAGGCATTCTGTTGGCTAGGTCCCTGGTTTATGTTCCAAGCCTTTGTTTGGGTATaGCCCACCTGGCATGGAAGC | + |
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Preference number: 5 (lower is better) Translates to: PLGIAKAFCWLGPWFMFQAFVWV*PTWHGS Trigger: GCTTCCATGCCAGGTGGGCAATACCCAAACAAAGGC...TTGGAACATAAACCAGGGACCTAGCCAACAGAATGCCTTAGCAATGCCCAGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000400613.5 |
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| CDS TCA 90 bp | CCAAAGCTTTGGGATGAGGAAGCTGCATCCCAAAAGAGGGTCCTCTaGGATGGTTCTCAAGGATACGGCAGGGCCTACCTTTTGGAAGCA | + |
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Preference number: 5 (lower is better) Translates to: PKLWDEEAASQKRVL*DGSQGYGRAYLLEA Trigger: TGCTTCCAAAAGGTAGGCCCTGCCGTATCCTTGAGAACCATCTCAGAGGACCCTCTTTTGGGATGCAGCTTCCTCATCCCAAAGCTTTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000473442.1 |
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| CDS CCA 90 bp | GCTGGGCAGCCTCTGGGATTCCGGTTCCTTGCTGAGTCATCTGATTaGTTTCAAACAAGTGTGTGTCTCCTTCAGGAGGGAGCCTTTGAT | + |
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Preference number: 5 (lower is better) Translates to: AGQPLGFRFLAESSD*FQTSVCLLQEGAFD Trigger: ATCAAAGGCTCCCTCCTGAAGGAGACACACACTTGTTTGAAACCAATCAGATGACTCAGCAAGGAACCGGAATCCCAGAGGCTGCCCAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000400613.5 |
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| CDS CCA 90 bp | GTTCCGGGCAGCTTGGGAGATCCTGGGTGTTTTCCTCTGGGGAAATaGATAGTAAGCTGGTTTGCCAGACCTGTGTGGGTTCTTTATGGA | + |
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Preference number: 5 (lower is better) Translates to: VPGSLGDPGCFPLGK*IVSWFARPVWVLYG Trigger: TCCATAAAGAACCCACACAGGTCTGGCAAACCAGCTTACTATCCATTTCCCCAGAGGAAAACACCCAGGATCTCCCAAGCTGCCCGGAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000400613.5 |
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| CDS-3UTR CAA 90 bp | CTAGTTAACAGCTCTGGATGTAGATGGGCAAGACTGGACGGCCATGCAGAGAAAGCCCCTATGATGTACTaGATGACTGGTGTCCTGGGG | + |
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Preference number: 5 (lower is better) Translates to: LVNSSGCRWARLDGHAEKAPMMY*MTGVLG Trigger: CCCCAGGACACCAGTCATCAAGTACATCATAGGGGC...TTTCTCTGCATGGCCGTCCAGTCTTGCCCATCTACATCCAGAGCTGTTAACTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000400613.5 |
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| CDS-3UTR CAA 90 bp | AATTATCCAGTTCCAGGGATGGAGCAGATGTCTTACTGGTCCTCCCCAAGGAATCAGGTTCCGGGCAGCTaGGGAGATCCTGGGTGTTTT | + |
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Preference number: 5 (lower is better) Translates to: NYPVPGMEQMSYWSSPRNQVPGS*GDPGCF Trigger: AAAACACCCAGGATCTCCCAAGCTGCCCGGAACCTG...ATTCCTTGGGGAGGACCAGTAAGACATCTGCTCCATCCCTGGAACTGGATAATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000400613.5 |
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| CDS CCA 90 bp | CTTTGTTTGGGTATTGCCCACCTGGCATGGAAGCTGGGCAGCCTCTaGGATTCCGGTTCCTTGCTGAGTCATCTGATTGGTTTCAAACAA | + |
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Preference number: 5 (lower is better) Translates to: LCLGIAHLAWKLGSL*DSGSLLSHLIGFKQ Trigger: TTGTTTGAAACCAATCAGATGACTCAGCAAGGAACCGGAATCCCAGAGGCTGCCCAGCTTCCATGCCAGGTGGGCAATACCCAAACAAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000400613.5 |
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| CDS-3UTR CAA 90 bp | ATTAGGTTAGTCCAGTTCTTGCTCATAGCTAGAGACCTCGTTGTGGCTCTGCCTATTGACCCCTGGGCATaGCTAAGGCATTCTGTTGGC | + |
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Preference number: 5 (lower is better) Translates to: IRLVQFLLIARDLVVALPIDPWA*LRHSVG Trigger: GCCAACAGAATGCCTTAGCAATGCCCAGGGGTCAAT...AGGCAGAGCCACAACGAGGTCTCTAGCTATGAGCAAGAACTGGACTAACCTAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000400613.5 |
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| CDS GCA 90 bp | AGATCCTGGGTGTTTTCCTCTGGGGAAATGGATAGTAAGCTGGTTTaGCAGACCTGTGTGGGTTCTTTATGGAAAGAGGACATTGAGTGC | + |
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Preference number: 5 (lower is better) Translates to: RSWVFSSGEMDSKLV*QTCVGSLWKEDIEC Trigger: GCACTCAATGTCCTCTTTCCATAAAGAACCCACACAGGTCTGGCAAACCAGCTTACTATCCATTTCCCCAGAGGAAAACACCCAGGATCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000400613.5 |
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| CDS CCA 90 bp | TTGGGAGATCCTGGGTGTTTTCCTCTGGGGAAATGGATAGTAAGCTaGTTTGCCAGACCTGTGTGGGTTCTTTATGGAAAGAGGACATTG | + |
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Preference number: 5 (lower is better) Translates to: LGDPGCFPLGKWIVS*FARPVWVLYGKRTL Trigger: CAATGTCCTCTTTCCATAAAGAACCCACACAGGTCTGGCAAACCAGCTTACTATCCATTTCCCCAGAGGAAAACACCCAGGATCTCCCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000400613.5 |
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| CDS-3UTR CAA 90 bp | AAGGCATTCTGTTGGCTAGGTCCCTGGTTTATGTTCCAAAATTATCCAGTTCCAGTGTGTTTCCTCCTTTaGGAAGCACCAGGAGGTGGG | + |
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Preference number: 5 (lower is better) Translates to: KAFCWLGPWFMFQNYPVPVCFLL*EAPGGG Trigger: CCCACCTCCTGGTGCTTCCAAAAGGAGGAAACACAC...TGGAACTGGATAATTTTGGAACATAAACCAGGGACCTAGCCAACAGAATGCCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000400613.5 |
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| CDS-3UTR CAA 90 bp | AATTATCCAGTTCCAGGGATGGAGCAGATGTCTTACTGGTCCTCCCCAAGGAATAGGTTAGTCCAGTTCTaGCTCATAGCTAGAGACCTC | + |
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Preference number: 5 (lower is better) Translates to: NYPVPGMEQMSYWSSPRNRLVQF*LIARDL Trigger: GAGGTCTCTAGCTATGAGCAAGAACTGGACTAACCT...ATTCCTTGGGGAGGACCAGTAAGACATCTGCTCCATCCCTGGAACTGGATAATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000400613.5 |
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| CDS TCA 90 bp | TGCCAGACCTGTGTGGGTTCTTTATGGAAAGAGGACATTGAGTGCTaGATTTTAAGCCAGATTCCACTGCCTTTGTTTGGGTATTGCCCA | + |
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Preference number: 5 (lower is better) Translates to: CQTCVGSLWKEDIEC*ILSQIPLPLFGYCP Trigger: TGGGCAATACCCAAACAAAGGCAGTGGAATCTGGCTTAAAATTCAGCACTCAATGTCCTCTTTCCATAAAGAACCCACACAGGTCTGGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000400613.5 |
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| CDS-3UTR CAA 90 bp | AAGGCATTCTGTTGGCTAGGTCCCTGGTTTATGTTCCAAAATTATCCAGTTCCATGGGATTCCGGTTCCTaGCTGAGTCATCTGATTGGT | + |
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Preference number: 5 (lower is better) Translates to: KAFCWLGPWFMFQNYPVPWDSGS*LSHLIG Trigger: ACCAATCAGATGACTCAGCAAGGAACCGGAATCCCA...TGGAACTGGATAATTTTGGAACATAAACCAGGGACCTAGCCAACAGAATGCCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000400613.5 |
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| CDS-3UTR CAA 90 bp | ATGAGAAATCATCAGAAGACATTGAAAACAAGAATGCCACGCCCATTGACCCCTCAGATTCCACTGCCTTaGTTTGGGTATTGCCCACCT | + |
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Preference number: 5 (lower is better) Translates to: MRNHQKTLKTRMPRPLTPQIPLP*FGYCPP Trigger: AGGTGGGCAATACCCAAACAAAGGCAGTGGAATCTG...AGGGGTCAATGGGCGTGGCATTCTTGTTTTCAATGTCTTCTGATGATTTCTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000400613.5 |
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| CDS-3UTR CAA 90 bp | CAGATGTCTTACTGGTCCTCCCCAAGGAATGGATATCCAGGACCTCATAGTAATAATCATCAGAAGACATaGAAAACAAGAATGCCACGC | + |
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Preference number: 5 (lower is better) Translates to: QMSYWSSPRNGYPGPHSNNHQKT*KTRMPR Trigger: GCGTGGCATTCTTGTTTTCAATGTCTTCTGATGATT...ATTACTATGAGGTCCTGGATATCCATTCCTTGGGGAGGACCAGTAAGACATCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000400613.5 |
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| CDS-3UTR CAA 90 bp | GAACTTAATTTGCAGAGAGAGAGAGAGAGAAAAGATAGGCAGGAAGGCAGGAAATTAATCCAAACAGCATaGACCATCGATTCTGCAGGA | + |
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Preference number: 5 (lower is better) Translates to: ELNLQRERERKDRQEGRKLIQTA*TIDSAG Trigger: TCCTGCAGAATCGATGGTCAATGCTGTTTGGATTAA...TTTCCTGCCTTCCTGCCTATCTTTTCTCTCTCTCTCTCTCTGCAAATTAAGTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000400613.5 |
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| CDS-3UTR CAA 90 bp | ATGAGAAATCATCAGAAGACATTGAAAACAAGAATGCCACGCCCATTGACCCCTAGGTCCTTCCATTGCTaGATCCTAAAGTTTAGAATC | + |
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Preference number: 5 (lower is better) Translates to: MRNHQKTLKTRMPRPLTPRSFHC*ILKFRI Trigger: GATTCTAAACTTTAGGATCAAGCAATGGAAGGACCT...AGGGGTCAATGGGCGTGGCATTCTTGTTTTCAATGTCTTCTGATGATTTCTCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000400613.5 |
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| CDS CCA 72 bp | GCCTTCATACTGGGCTCGCAGGAACTGGATGCTGAGTaGGGGCCCTTTCCCAGGGGCCTGAGTCCTGGAGCC | + |
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Preference number: 6 (lower is better) Translates to: AFILGSQELDAE*GPFPRGLSPGA Trigger: GGCTCCAGGACTCAGGCCCCTGGGAAAGGGCCCCCACTCAGCATCCAGTTCCTGCGAGCCCAGTATGAAGGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000400613.5 |
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| CDS CCA 72 bp | TTGGACCAAACAATGCATCTCCAGGTGCGTGTGCCATaGAGACTTGGGGGCCTGAAGGCAGCCCTGGGCAGC | + |
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Preference number: 6 (lower is better) Translates to: LDQTMHLQVRVP*RLGGLKAALGS Trigger: GCTGCCCAGGGCTGCCTTCAGGCCCCCAAGTCTCCATGGCACACGCACCTGGAGATGCATTGTTTGGTCCAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000400613.5 |
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| CDS CCA 72 bp | CACGCTGAGCCATATAAGCCCAGGTTCCGGGCAGCTTaGGAGATCCTGGGTGTTTTCCTCTGGGGAAATGGA | + |
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Preference number: 6 (lower is better) Translates to: HAEPYKPRFRAA*EILGVFLWGNG Trigger: TCCATTTCCCCAGAGGAAAACACCCAGGATCTCCCAAGCTGCCCGGAACCTGGGCTTATATGGCTCAGCGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000400613.5 |
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| CDS TCA 72 bp | TGGGATGAGGAAGCTGCATCCCAAAAGAGGGTCCTCTaGGATGGTTCTCAAGGATACGGCAGGGCCTACCTT | + |
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Preference number: 6 (lower is better) Translates to: WDEEAASQKRVL*DGSQGYGRAYL Trigger: AAGGTAGGCCCTGCCGTATCCTTGAGAACCATCTCAGAGGACCCTCTTTTGGGATGCAGCTTCCTCATCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000473442.1 |
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| CDS CCA 72 bp | ATTAATGGGGCGAGAGAAGAAAGAGAGGGAGGAAGATaGAGACAGGCAGGAGGAGGCAGGGAAAGGAGTGAT | + |
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Preference number: 6 (lower is better) Translates to: INGAREEREGGR*RQAGGGRERSD Trigger: ATCACTCCTTTCCCTGCCTCCTCCTGCCTGTCTCCATCTTCCTCCCTCTCTTTCTTCTCTCGCCCCATTAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000400613.5 |
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| CDS CCA 72 bp | CATATAAGCCCAGGTTCCGGGCAGCTTGGGAGATCCTaGGTGTTTTCCTCTGGGGAAATGGATAGTAAGCTG | + |
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Preference number: 6 (lower is better) Translates to: HISPGSGQLGRS*VFSSGEMDSKL Trigger: CAGCTTACTATCCATTTCCCCAGAGGAAAACACCCAGGATCTCCCAAGCTGCCCGGAACCTGGGCTTATATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000400613.5 |
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| CDS CCA 72 bp | CCTGGGTGTTTTCCTCTGGGGAAATGGATAGTAAGCTaGTTTGCCAGACCTGTGTGGGTTCTTTATGGAAAG | + |
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Preference number: 6 (lower is better) Translates to: PGCFPLGKWIVS*FARPVWVLYGK Trigger: CTTTCCATAAAGAACCCACACAGGTCTGGCAAACCAGCTTACTATCCATTTCCCCAGAGGAAAACACCCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000400613.5 |
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| CDS GCA 72 bp | CTCCTTGTTAATCCAAACAGCATTGACCATCGATTCTaGAGGAGCAGGTGTGTTTCCTCCTTTTGGAAGCAC | + |
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Preference number: 6 (lower is better) Translates to: LLVNPNSIDHRF*RSRCVSSFWKH Trigger: GTGCTTCCAAAAGGAGGAAACACACCTGCTCCTGCAGAATCGATGGTCAATGCTGTTTGGATTAACAAGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000400613.5 |
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| CDS CAA 72 bp | AGTGAGCTTCTTCTCTCCTTGTTAATCCAAACAGCATaGACCATCGATTCTGCAGGAGCAGGTGTGTTTCCT | + |
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Preference number: 6 (lower is better) Translates to: SELLLSLLIQTA*TIDSAGAGVFP Trigger: AGGAAACACACCTGCTCCTGCAGAATCGATGGTCAATGCTGTTTGGATTAACAAGGAGAGAAGAAGCTCACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000400613.5 |
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| CDS GCA 72 bp | GGGGTCAAGAAGGTGTCTTATTCCAGGTCCTTCCATTaGTTGATCCTAAAGTTTAGAATCCAATTCCCAGTG | + |
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Preference number: 6 (lower is better) Translates to: GVKKVSYSRSFH*LILKFRIQFPV Trigger: CACTGGGAATTGGATTCTAAACTTTAGGATCAAGCAATGGAAGGACCTGGAATAAGACACCTTCTTGACCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000400613.5 |
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| CDS CCA 72 bp | GAGAAACTCCAAGACATGAAGTCATCAGCACACTTCTaGTTCTATGTAATGATGAAAGGCAGACAGGTCAGC | + |
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Preference number: 6 (lower is better) Translates to: EKLQDMKSSAHF*FYVMMKGRQVS Trigger: GCTGACCTGTCTGCCTTTCATCATTACATAGAACCAGAAGTGTGCTGATGACTTCATGTCTTGGAGTTTCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000473442.1 |
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| CDS CAA 72 bp | GTCAAGAAGGTGTCTTATTCCAGGTCCTTCCATTGCTaGATCCTAAAGTTTAGAATCCAATTCCCAGTGCCA | + |
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Preference number: 6 (lower is better) Translates to: VKKVSYSRSFHC*ILKFRIQFPVP Trigger: TGGCACTGGGAATTGGATTCTAAACTTTAGGATCAAGCAATGGAAGGACCTGGAATAAGACACCTTCTTGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000400613.5 |
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