Pregenerated sensors for C9ORF135 (Homo sapiens)
Ensembl gene IDs: ENSG00000204711Ensembl transcript IDs: ENST00000377197.8, ENST00000466872.2, ENST00000480564.1, ENST00000495399.1, ENST00000527647.5, ENST00000529131.5, ENST00000529446.5
Found 115 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CAA 90 bp | TTAAAGGCAAGTCGAAGATGTCATGTAAAGGGCATTTTGTTGACCTaGGCTCACCCTGTCATACCTTTGCCCCTGCAAACAAACCTTCTG | + |
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Preference number: 2 (lower is better) Translates to: LKASRRCHVKGILLT*AHPVIPLPLQTNLL Trigger: CAGAAGGTTTGTTTGCAGGGGCAAAGGTATGACAGGGTGAGCCAAGGTCAACAAAATGCCCTTTACATGACATCTTCGACTTGCCTTTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000495399.1 |
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| 3UTR-3UTR CCA 90 bp | CGTGAACTGAGAACGGCATTTTCTGTGGACTATGGAATAATCATCTTGACAGGGTTTGCTCCAATCCGGTaGATGTCTAGGAAAGACAGC | + |
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Preference number: 2 (lower is better) Translates to: RELRTAFSVDYGIIILTGFAPIR*MSRKDS Trigger: GCTGTCTTTCCTAGACATCCACCGGATTGGAGCAAA...CCCTGTCAAGATGATTATTCCATAGTCCACAGAAAATGCCGTTCTCAGTTCACG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000529131.5 ENST00000529446.5 |
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| 3UTR CAA 90 bp | AACATTTGGTTAAAGGCAAGTCGAAGATGTCATGTAAAGGGCATTTaGTTGACCTTGGCTCACCCTGTCATACCTTTGCCCCTGCAAACA | + |
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Preference number: 2 (lower is better) Translates to: NIWLKASRRCHVKGI*LTLAHPVIPLPLQT Trigger: TGTTTGCAGGGGCAAAGGTATGACAGGGTGAGCCAAGGTCAACAAAATGCCCTTTACATGACATCTTCGACTTGCCTTTAACCAAATGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000495399.1 |
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| 3UTR-3UTR GCA 90 bp | ACAGGGATAAGCAGTTTTGAGGACTTTAGAATGTCAATGATCAAACCTGGGAGATCAATGCACACATTTTaGTCCAATCCGGTGGATGTC | + |
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Preference number: 2 (lower is better) Translates to: TGISSFEDFRMSMIKPGRSMHTF*SNPVDV Trigger: GACATCCACCGGATTGGAGCAAAATGTGTGCATTGA...TCTCCCAGGTTTGATCATTGACATTCTAAAGTCCTCAAAACTGCTTATCCCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000529131.5 |
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| 3UTR-3UTR CCA 90 bp | TTAAATTGGCACAATAGGCCCACTAGTCAAGGGATAGAGTTTCTGTTTTACATCTTTGCTCCAATCCGGTaGATGTCTAGGAAAGACAGC | + |
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Preference number: 2 (lower is better) Translates to: LNWHNRPTSQGIEFLFYIFAPIR*MSRKDS Trigger: GCTGTCTTTCCTAGACATCCACCGGATTGGAGCAAA...GATGTAAAACAGAAACTCTATCCCTTGACTAGTGGGCCTATTGTGCCAATTTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000529131.5 ENST00000529446.5 |
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| 3UTR-3UTR TCA 90 bp | TTAAATTGGCACAATAGGCCCACTAGTCAAGGGATAGAGTTTCTGTTTTACATCTTTAGATCCGTGAACTaGGAACGGCATTTTCTGTGG | + |
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Preference number: 2 (lower is better) Translates to: LNWHNRPTSQGIEFLFYIFRSVN*ERHFLW Trigger: CCACAGAAAATGCCGTTCTCAGTTCACGGATCTAAA...GATGTAAAACAGAAACTCTATCCCTTGACTAGTGGGCCTATTGTGCCAATTTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000527647.5 ENST00000529131.5 ENST00000529446.5 |
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| 3UTR CAA 90 bp | CTTTCGATAATCCCGGAGCTCACTGTTTCCTCATTCAATAAAGCCTaGCTCTTCATTTCAACCCATTCTGTGTTTAAACACATTTGTGAC | + |
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Preference number: 2 (lower is better) Translates to: LSIIPELTVSSFNKA*LFISTHSVFKHICD Trigger: GTCACAAATGTGTTTAAACACAGAATGGGTTGAAATGAAGAGCAAGGCTTTATTGAATGAGGAAACAGTGAGCTCCGGGATTATCGAAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000495399.1 ENST00000529131.5 ENST00000529446.5 |
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| 3UTR-3UTR TCA 90 bp | TTAAATTGGCACAATAGGCCCACTAGTCAAGGGATAGAGTTTCTGTTTTACATCAACCATTTAGATCCGTaGACTGAGAACGGCATTTTC | + |
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Preference number: 2 (lower is better) Translates to: LNWHNRPTSQGIEFLFYINHLDP*TENGIF Trigger: GAAAATGCCGTTCTCAGTTCACGGATCTAAATGGTT...GATGTAAAACAGAAACTCTATCCCTTGACTAGTGGGCCTATTGTGCCAATTTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000527647.5 ENST00000529131.5 ENST00000529446.5 |
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| 3UTR-3UTR GCA 90 bp | TTAAATTGGCACAATAGGCCCACTAGTCAAGGGATAGAGTTTCTGTTTTACATCATCCCACTCTCATCATaGCAAGTGTTGATGCCAAAT | + |
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Preference number: 2 (lower is better) Translates to: LNWHNRPTSQGIEFLFYIIPLSS*QVLMPN Trigger: ATTTGGCATCAACACTTGGCATGATGAGAGTGGGAT...GATGTAAAACAGAAACTCTATCCCTTGACTAGTGGGCCTATTGTGCCAATTTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000527647.5 ENST00000529131.5 ENST00000529446.5 |
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| 3UTR-3UTR CCA 90 bp | ACAGGGATAAGCAGTTTTGAGGACTTTAGAATGTCAATGATCAAACCTGGGAGAATAGGGAAGAACATGTaGCTGATAATCATATGGTGG | + |
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Preference number: 2 (lower is better) Translates to: TGISSFEDFRMSMIKPGRIGKNM*LIIIWW Trigger: CCACCATATGATTATCAGCCACATGTTCTTCCCTAT...TCTCCCAGGTTTGATCATTGACATTCTAAAGTCCTCAAAACTGCTTATCCCTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000529131.5 |
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| 3UTR CAA 90 bp | CATACCTTTGCCCCTGCAAACAAACCTTCTGAATCAAGAAACATTTaGTACAGTTGTAGCAGTTTAGGGACTACTAACATTTTGCTCCAA | + |
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Preference number: 2 (lower is better) Translates to: HTFAPANKPSESRNI*YSCSSLGTTNILLQ Trigger: TTGGAGCAAAATGTTAGTAGTCCCTAAACTGCTACAACTGTACAAAATGTTTCTTGATTCAGAAGGTTTGTTTGCAGGGGCAAAGGTATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000495399.1 |
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| 3UTR-3UTR TCA 90 bp | AATGTCAATGATCAAACCTGGGAGATTATAGAGTTCTCCAAATGGGTAGAGAAAGGCTTAGAGAAGAGTTaGAATGAAGAGGAGGAAGAT | + |
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Preference number: 2 (lower is better) Translates to: NVNDQTWEIIEFSKWVEKGLEKS*NEEEED Trigger: ATCTTCCTCCTCTTCATTTCAACTCTTCTCTAAGCC...TTTCTCTACCCATTTGGAGAACTCTATAATCTCCCAGGTTTGATCATTGACATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000529131.5 |
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| 3UTR-3UTR CCA 90 bp | AGTTGTAGCAGTTTAGGGACTACTAACATTTTGCTCCAATCCGGTGGATGTCTAAAAGGAGAAAACATTTaGTTAAAGGCAAGTCGAAGA | + |
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Preference number: 2 (lower is better) Translates to: SCSSLGTTNILLQSGGCLKGENI*LKASRR Trigger: TCTTCGACTTGCCTTTAACCAAATGTTTTCTCCTTT...TAGACATCCACCGGATTGGAGCAAAATGTTAGTAGTCCCTAAACTGCTACAACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000495399.1 |
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| 3UTR-3UTR TCA 90 bp | ATCTTGACAGGGATAAGCAGTTTTGAGGACTTTAGAATGTCAATGATCAAACCTTGGAACATAATCTTCTaGGTACGTTGTCAATGCACA | + |
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Preference number: 2 (lower is better) Translates to: ILTGISSFEDFRMSMIKPWNIIF*VRCQCT Trigger: TGTGCATTGACAACGTACTCAGAAGATTATGTTCCA...AGGTTTGATCATTGACATTCTAAAGTCCTCAAAACTGCTTATCCCTGTCAAGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000529131.5 |
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| 3UTR-3UTR GCA 90 bp | ACAGGGATAAGCAGTTTTGAGGACTTTAGAATGTCAATGATCAAACCTGGGAGACATTCAATAAAGCCTTaGTCTTCATTTCAACCCATT | + |
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Preference number: 2 (lower is better) Translates to: TGISSFEDFRMSMIKPGRHSIKP*SSFQPI Trigger: AATGGGTTGAAATGAAGAGCAAGGCTTTATTGAATG...TCTCCCAGGTTTGATCATTGACATTCTAAAGTCCTCAAAACTGCTTATCCCTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000529131.5 |
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| 3UTR-3UTR GCA 90 bp | AGGGATAAGCATGTGGCTGATAATCATATGGTGGAACATAATCTTCTGAGTACGCATTCAATAAAGCCTTaGTCTTCATTTCAACCCATT | + |
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Preference number: 2 (lower is better) Translates to: RDKHVADNHMVEHNLLSTHSIKP*SSFQPI Trigger: AATGGGTTGAAATGAAGAGCAAGGCTTTATTGAATG...CGTACTCAGAAGATTATGTTCCACCATATGATTATCAGCCACATGCTTATCCCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000529446.5 |
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| 3UTR-3UTR GCA 90 bp | TTAAATTGGCACAATAGGCCCACTAGTCAAGGGATAGAGTTTCTGTTTTACATCAGAGAAAATATCCTTTaGTATGAAGGCTTAGAGAAG | + |
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Preference number: 2 (lower is better) Translates to: LNWHNRPTSQGIEFLFYIRENIL*YEGLEK Trigger: CTTCTCTAAGCCTTCATAGCAAAGGATATTTTCTCT...GATGTAAAACAGAAACTCTATCCCTTGACTAGTGGGCCTATTGTGCCAATTTAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000529131.5 |
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| 3UTR-3UTR CAA 90 bp | AGGCAATCCGGTGACCCTTTCGATAATCCCGGAGCTCACTGTTTCCTCATTCAAGAAAGGAGAAAACATTaGGTTAAAGGCAAGTCGAAG | + |
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Preference number: 3 (lower is better) Translates to: RQSGDPFDNPGAHCFLIQERRKH*VKGKSK Trigger: CTTCGACTTGCCTTTAACCAAATGTTTTCTCCTTTC...TTGAATGAGGAAACAGTGAGCTCCGGGATTATCGAAAGGGTCACCGGATTGCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000495399.1 |
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| 3UTR-3UTR CAA 90 bp | ATTTTGTACAGTTGTAGCAGTTTAGGGACTACTAACATTTTGCTCCAATCCGGTCATGTAAAGGGCATTTaGTTGACCTTGGCTCACCCT | + |
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Preference number: 3 (lower is better) Translates to: ILYSCSSLGTTNILLQSGHVKGI*LTLAHP Trigger: AGGGTGAGCCAAGGTCAACAAAATGCCCTTTACATG...ACCGGATTGGAGCAAAATGTTAGTAGTCCCTAAACTGCTACAACTGTACAAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000495399.1 |
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| 3UTR TCA 72 bp | ATGTGGCTGATAATCATATGGTGGAACATAATCTTCTaGGTACGTTGTCAATGCACACATTTTGCTCCAATC | + |
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Preference number: 3 (lower is better) Translates to: MWLIIIWWNIIF*VRCQCTHFAPI Trigger: GATTGGAGCAAAATGTGTGCATTGACAACGTACTCAGAAGATTATGTTCCACCATATGATTATCAGCCACAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000529131.5 ENST00000529446.5 |
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| 3UTR-3UTR CAA 90 bp | TTAAATTGGCACAATAGGCCCACTAGTCAAGGGATAGAGTTTCTGTTTTACATCTCATCATGCCAAGTGTaGATGCCAAATCTTTTAGAA | + |
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Preference number: 3 (lower is better) Translates to: LNWHNRPTSQGIEFLFYISSCQV*MPNLLE Trigger: TTCTAAAAGATTTGGCATCAACACTTGGCATGATGA...GATGTAAAACAGAAACTCTATCCCTTGACTAGTGGGCCTATTGTGCCAATTTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000527647.5 ENST00000529131.5 ENST00000529446.5 |
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| CDS-3UTR GCA 90 bp | GCAAGTCGAAGATGTCATGTAAAGGGCATTTTGTTGACCTTGGCTCACCCTGTCGGGTCAGGGAGCCCTTaGGCTCCACCAAGTCCGGTG | + |
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Preference number: 4 (lower is better) Translates to: ASRRCHVKGILLTLAHPVGSGSP*APPSPV Trigger: CACCGGACTTGGTGGAGCGCAAGGGCTCCCTGACCC...GACAGGGTGAGCCAAGGTCAACAAAATGCCCTTTACATGACATCTTCGACTTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000495399.1 |
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| CDS-3UTR TCA 90 bp | AGGCAATCCGGTGACCCTTTCGATAATCCCGGAGCTCACTGTTTCCTCATTCAACGAGGTACAGACCTCTaGGGAGTTCCCTATGCACCT | + |
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Preference number: 4 (lower is better) Translates to: RQSGDPFDNPGAHCFLIQRGTDL*GVPYAP Trigger: AGGTGCATAGGGAACTCCTCAGAGGTCTGTACCTCG...TTGAATGAGGAAACAGTGAGCTCCGGGATTATCGAAAGGGTCACCGGATTGCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000529131.5 ENST00000529446.5 |
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| CDS-3UTR GCA 90 bp | TTAAATTGGCACAATAGGCCCACTAGTCAAGGGATAGAGTTTCTGTTTTACATCGGGTCAGGGAGCCCTTaGGCTCCACCAAGTCCGGTG | + |
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Preference number: 4 (lower is better) Translates to: LNWHNRPTSQGIEFLFYIGSGSP*APPSPV Trigger: CACCGGACTTGGTGGAGCGCAAGGGCTCCCTGACCC...GATGTAAAACAGAAACTCTATCCCTTGACTAGTGGGCCTATTGTGCCAATTTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000527647.5 ENST00000529131.5 ENST00000529446.5 |
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| CDS-3UTR CCA 90 bp | CCCTGTCATACCTTTGCCCCTGCAAACAAACCTTCTGAATCAAGAAACATTTTGCTCCACCAAGTCCGGTaGTCCGATCTCCAACCAGTG | + |
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Preference number: 4 (lower is better) Translates to: PCHTFAPANKPSESRNILLHQVR*SDLQPV Trigger: CACTGGTTGGAGATCGGACCACCGGACTTGGTGGAG...CAAAATGTTTCTTGATTCAGAAGGTTTGTTTGCAGGGGCAAAGGTATGACAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000495399.1 |
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| 3UTR CAA 72 bp | AAGGCAAGTCGAAGATGTCATGTAAAGGGCATTTTGTaGACCTTGGCTCACCCTGTCATACCTTTGCCCCTG | + |
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Preference number: 4 (lower is better) Translates to: KASRRCHVKGIL*TLAHPVIPLPL Trigger: CAGGGGCAAAGGTATGACAGGGTGAGCCAAGGTCAACAAAATGCCCTTTACATGACATCTTCGACTTGCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000495399.1 |
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| CDS-3UTR TCA 90 bp | AGGCAATCCGGTGACCCTTTCGATAATCCCGGAGCTCACTGTTTCCTCATTCAATTTAGATCCGTGAACTaGGAACGGCATTTTCTGTGG | + |
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Preference number: 4 (lower is better) Translates to: RQSGDPFDNPGAHCFLIQFRSVN*ERHFLW Trigger: CCACAGAAAATGCCGTTCTCAGTTCACGGATCTAAA...TTGAATGAGGAAACAGTGAGCTCCGGGATTATCGAAAGGGTCACCGGATTGCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000529131.5 ENST00000529446.5 |
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| CDS-3UTR TCA 90 bp | GGAAAGACAGCTCCAAAACCTGTGGCAGGCAATCCGGTGACCCTTTCGATAATCAACCATTTAGATCCGTaGACTGAGAACGGCATTTTC | + |
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Preference number: 4 (lower is better) Translates to: GKTAPKPVAGNPVTLSIINHLDP*TENGIF Trigger: GAAAATGCCGTTCTCAGTTCACGGATCTAAATGGTT...GATTATCGAAAGGGTCACCGGATTGCCTGCCACAGGTTTTGGAGCTGTCTTTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000529131.5 ENST00000529446.5 |
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| CDS-3UTR GCA 90 bp | CGTGAACTGAGAACGGCATTTTCTGTGGACTATGGAATAATCATCTTGACAGGGATCTCCAACCAGTGTTaGTTCCTGTCGCACCAGTCC | + |
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Preference number: 4 (lower is better) Translates to: RELRTAFSVDYGIIILTGISNQC*FLSHQS Trigger: GGACTGGTGCGACAGGAAGCAACACTGGTTGGAGAT...CCCTGTCAAGATGATTATTCCATAGTCCACAGAAAATGCCGTTCTCAGTTCACG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000529131.5 ENST00000529446.5 |
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| CDS-3UTR CCA 90 bp | ACAGGGATAAGCAGTTTTGAGGACTTTAGAATGTCAATGATCAAACCTGGGAGACTCCACCAAGTCCGGTaGTCCGATCTCCAACCAGTG | + |
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Preference number: 4 (lower is better) Translates to: TGISSFEDFRMSMIKPGRLHQVR*SDLQPV Trigger: CACTGGTTGGAGATCGGACCACCGGACTTGGTGGAG...TCTCCCAGGTTTGATCATTGACATTCTAAAGTCCTCAAAACTGCTTATCCCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000529131.5 |
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| CDS-3UTR TCA 90 bp | GTGGCTGATAATCATATGGTGGAACATAATCTTCTGAGTACGTTGTCAATGCACCGAGGTACAGACCTCTaGGGAGTTCCCTATGCACCT | + |
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Preference number: 4 (lower is better) Translates to: VADNHMVEHNLLSTLSMHRGTDL*GVPYAP Trigger: AGGTGCATAGGGAACTCCTCAGAGGTCTGTACCTCG...GTGCATTGACAACGTACTCAGAAGATTATGTTCCACCATATGATTATCAGCCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000529131.5 ENST00000529446.5 |
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| CDS-3UTR TCA 90 bp | AGTTTAGGGACTACTAACATTTTGCTCCAATCCGGTGGATGTCTAGGAAAGACATTCGAGTATTTCTTGTaGTGGGAGCGGAGGGTCAGG | + |
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Preference number: 4 (lower is better) Translates to: SLGTTNILLQSGGCLGKTFEYFL*WERRVR Trigger: CCTGACCCTCCGCTCCCATCACAAGAAATACTCGAA...TGTCTTTCCTAGACATCCACCGGATTGGAGCAAAATGTTAGTAGTCCCTAAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000495399.1 |
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| CDS-3UTR TCA 90 bp | GGAAAGACAGCTCCAAAACCTGTGGCAGGCAATCCGGTGACCCTTTCGATAATCTGGAACATAATCTTCTaGGTACGTTGTCAATGCACA | + |
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Preference number: 4 (lower is better) Translates to: GKTAPKPVAGNPVTLSIIWNIIF*VRCQCT Trigger: TGTGCATTGACAACGTACTCAGAAGATTATGTTCCA...GATTATCGAAAGGGTCACCGGATTGCCTGCCACAGGTTTTGGAGCTGTCTTTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000529131.5 ENST00000529446.5 |
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| CDS-3UTR GCA 90 bp | TTGGTTAAAGGCAAGTCGAAGATGTCATGTAAAGGGCATTTTGTTGACCTTGGCGCTTCTCTGTCACGGTaGCAGGAATACACCAACACC | + |
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Preference number: 4 (lower is better) Translates to: LVKGKSKMSCKGHFVDLGASLSR*QEYTNT Trigger: GGTGTTGGTGTATTCCTGGCACCGTGACAGAGAAGC...GCCAAGGTCAACAAAATGCCCTTTACATGACATCTTCGACTTGCCTTTAACCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000480564.1 |
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| CDS-3UTR CCA 90 bp | TTAAATTGGCACAATAGGCCCACTAGTCAAGGGATAGAGTTTCTGTTTTACATCCTCCACCAAGTCCGGTaGTCCGATCTCCAACCAGTG | + |
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Preference number: 4 (lower is better) Translates to: LNWHNRPTSQGIEFLFYILHQVR*SDLQPV Trigger: CACTGGTTGGAGATCGGACCACCGGACTTGGTGGAG...GATGTAAAACAGAAACTCTATCCCTTGACTAGTGGGCCTATTGTGCCAATTTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000527647.5 ENST00000529131.5 ENST00000529446.5 |
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| CDS-3UTR CCA 90 bp | ATGGTGGAACATAATCTTCTGAGTACGTTGTCAATGCACACATTTTGCTCCAATCTCCACCAAGTCCGGTaGTCCGATCTCCAACCAGTG | + |
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Preference number: 4 (lower is better) Translates to: MVEHNLLSTLSMHTFCSNLHQVR*SDLQPV Trigger: CACTGGTTGGAGATCGGACCACCGGACTTGGTGGAG...ATTGGAGCAAAATGTGTGCATTGACAACGTACTCAGAAGATTATGTTCCACCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000529131.5 ENST00000529446.5 |
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| 3UTR CAA 72 bp | AGTCGAAGATGTCATGTAAAGGGCATTTTGTTGACCTaGGCTCACCCTGTCATACCTTTGCCCCTGCAAACA | + |
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Preference number: 4 (lower is better) Translates to: SRRCHVKGILLT*AHPVIPLPLQT Trigger: TGTTTGCAGGGGCAAAGGTATGACAGGGTGAGCCAAGGTCAACAAAATGCCCTTTACATGACATCTTCGACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000495399.1 |
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| CDS-3UTR TCA 90 bp | TTAAATTGGCACAATAGGCCCACTAGTCAAGGGATAGAGTTTCTGTTTTACATCCGAGGTACAGACCTCTaGGGAGTTCCCTATGCACCT | + |
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Preference number: 4 (lower is better) Translates to: LNWHNRPTSQGIEFLFYIRGTDL*GVPYAP Trigger: AGGTGCATAGGGAACTCCTCAGAGGTCTGTACCTCG...GATGTAAAACAGAAACTCTATCCCTTGACTAGTGGGCCTATTGTGCCAATTTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000527647.5 ENST00000529131.5 ENST00000529446.5 |
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| CDS-3UTR GCA 90 bp | AGGGATAAGCATGTGGCTGATAATCATATGGTGGAACATAATCTTCTGAGTACGATCTCCAACCAGTGTTaGTTCCTGTCGCACCAGTCC | + |
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Preference number: 4 (lower is better) Translates to: RDKHVADNHMVEHNLLSTISNQC*FLSHQS Trigger: GGACTGGTGCGACAGGAAGCAACACTGGTTGGAGAT...CGTACTCAGAAGATTATGTTCCACCATATGATTATCAGCCACATGCTTATCCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000529446.5 |
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| CDS-3UTR CCA 90 bp | AGGGATAAGCATGTGGCTGATAATCATATGGTGGAACATAATCTTCTGAGTACGTGTCAAGGCTATCCATaGGAGCCCTCGAGGTACAGA | + |
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Preference number: 4 (lower is better) Translates to: RDKHVADNHMVEHNLLSTCQGYP*EPSRYR Trigger: TCTGTACCTCGAGGGCTCCCATGGATAGCCTTGACA...CGTACTCAGAAGATTATGTTCCACCATATGATTATCAGCCACATGCTTATCCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000529446.5 |
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| CDS-3UTR CCA 90 bp | TTAAATTGGCACAATAGGCCCACTAGTCAAGGGATAGAGTTTCTGTTTTACATCCTGTCGCACCAGTCCTaGCAGGATCTGTCAAGGCTA | + |
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Preference number: 4 (lower is better) Translates to: LNWHNRPTSQGIEFLFYILSHQS*QDLSRL Trigger: TAGCCTTGACAGATCCTGCCAGGACTGGTGCGACAG...GATGTAAAACAGAAACTCTATCCCTTGACTAGTGGGCCTATTGTGCCAATTTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000527647.5 ENST00000529131.5 ENST00000529446.5 |
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| CDS-3UTR CCA 90 bp | ATGGTGGAACATAATCTTCTGAGTACGTTGTCAATGCACACATTTTGCTCCAATCTGTCGCACCAGTCCTaGCAGGATCTGTCAAGGCTA | + |
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Preference number: 4 (lower is better) Translates to: MVEHNLLSTLSMHTFCSNLSHQS*QDLSRL Trigger: TAGCCTTGACAGATCCTGCCAGGACTGGTGCGACAG...ATTGGAGCAAAATGTGTGCATTGACAACGTACTCAGAAGATTATGTTCCACCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000529131.5 ENST00000529446.5 |
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| CDS-3UTR CCA 90 bp | CTTTCGATAATCCCGGAGCTCACTGTTTCCTCATTCAATAAAGCCTTGCTCTTCTTTGCTCCAATCCGGTaGATGTCTAGGAAAGACAGC | + |
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Preference number: 4 (lower is better) Translates to: LSIIPELTVSSFNKALLFFAPIR*MSRKDS Trigger: GCTGTCTTTCCTAGACATCCACCGGATTGGAGCAAA...GAAGAGCAAGGCTTTATTGAATGAGGAAACAGTGAGCTCCGGGATTATCGAAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000495399.1 ENST00000529131.5 ENST00000529446.5 |
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| CDS-3UTR TCA 90 bp | ATTTGGTTAAAGGCAAGTCGAAGATGTCATGTAAAGGGCATTTTGTTGACCTTGTTCGAGTATTTCTTGTaGTGGGAGCGGAGGGTCAGG | + |
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Preference number: 4 (lower is better) Translates to: IWLKASRRCHVKGILLTLFEYFL*WERRVR Trigger: CCTGACCCTCCGCTCCCATCACAAGAAATACTCGAA...CAAGGTCAACAAAATGCCCTTTACATGACATCTTCGACTTGCCTTTAACCAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000480564.1 ENST00000495399.1 |
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| CDS-3UTR GCA 90 bp | TTAAATTGGCACAATAGGCCCACTAGTCAAGGGATAGAGTTTCTGTTTTACATCATCTCCAACCAGTGTTaGTTCCTGTCGCACCAGTCC | + |
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Preference number: 4 (lower is better) Translates to: LNWHNRPTSQGIEFLFYIISNQC*FLSHQS Trigger: GGACTGGTGCGACAGGAAGCAACACTGGTTGGAGAT...GATGTAAAACAGAAACTCTATCCCTTGACTAGTGGGCCTATTGTGCCAATTTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000527647.5 ENST00000529131.5 ENST00000529446.5 |
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| CDS-3UTR GCA 90 bp | TTAAATTGGCACAATAGGCCCACTAGTCAAGGGATAGAGTTTCTGTTTTACATCGCTTCTCTGTCACGGTaGCAGGAATACACCAACACC | + |
|
Preference number: 4 (lower is better) Translates to: LNWHNRPTSQGIEFLFYIASLSR*QEYTNT Trigger: GGTGTTGGTGTATTCCTGGCACCGTGACAGAGAAGC...GATGTAAAACAGAAACTCTATCCCTTGACTAGTGGGCCTATTGTGCCAATTTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000527647.5 |
||
| CDS-3UTR GCA 90 bp | GGAAAGACAGCTCCAAAACCTGTGGCAGGCAATCCGGTGACCCTTTCGATAATCCATTCAATAAAGCCTTaGTCTTCATTTCAACCCATT | + |
|
Preference number: 4 (lower is better) Translates to: GKTAPKPVAGNPVTLSIIHSIKP*SSFQPI Trigger: AATGGGTTGAAATGAAGAGCAAGGCTTTATTGAATG...GATTATCGAAAGGGTCACCGGATTGCCTGCCACAGGTTTTGGAGCTGTCTTTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000495399.1 ENST00000529131.5 ENST00000529446.5 |
||
| CDS-3UTR GCA 90 bp | TTAAAGGCAAGTCGAAGATGTCATGTAAAGGGCATTTTGTTGACCTTGGCTCACACCCTGTCATACCTTTaGCCCTGCAAACAAACCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LKASRRCHVKGILLTLAHTLSYL*PCKQTF Trigger: GAAGGTTTGTTTGCAGGGGCAAAGGTATGACAGGGT...GTGAGCCAAGGTCAACAAAATGCCCTTTACATGACATCTTCGACTTGCCTTTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000480564.1 ENST00000495399.1 |
||
| CDS-3UTR CCA 90 bp | TTAAATTGGCACAATAGGCCCACTAGTCAAGGGATAGAGTTTCTGTTTTACATCTGTCAAGGCTATCCATaGGAGCCCTCGAGGTACAGA | + |
|
Preference number: 4 (lower is better) Translates to: LNWHNRPTSQGIEFLFYICQGYP*EPSRYR Trigger: TCTGTACCTCGAGGGCTCCCATGGATAGCCTTGACA...GATGTAAAACAGAAACTCTATCCCTTGACTAGTGGGCCTATTGTGCCAATTTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000527647.5 ENST00000529131.5 ENST00000529446.5 |
||
| CDS-3UTR GCA 90 bp | CTTTCGATAATCCCGGAGCTCACTGTTTCCTCATTCAATAAAGCCTTGCTCTTCATCCCACTCTCATCATaGCAAGTGTTGATGCCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: LSIIPELTVSSFNKALLFIPLSS*QVLMPN Trigger: ATTTGGCATCAACACTTGGCATGATGAGAGTGGGAT...GAAGAGCAAGGCTTTATTGAATGAGGAAACAGTGAGCTCCGGGATTATCGAAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000529131.5 ENST00000529446.5 |
||
| CDS-3UTR GCA 90 bp | TGGTTAAAGGCAAGTCGAAGATGTCATGTAAAGGGCATTTTGTTGACCTTGGCTGGACTACTAACATTTTaGTCCAATCCGGTGGATGTC | + |
|
Preference number: 4 (lower is better) Translates to: WLKASRRCHVKGILLTLAGLLTF*SNPVDV Trigger: GACATCCACCGGATTGGAGCAAAATGTTAGTAGTCC...AGCCAAGGTCAACAAAATGCCCTTTACATGACATCTTCGACTTGCCTTTAACCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000480564.1 ENST00000495399.1 |
||
| CDS-3UTR CCA 90 bp | AATGTCAATGATCAAACCTGGGAGATTATAGAGTTCTCCAAATGGGTAGAGAAATGTCAAGGCTATCCATaGGAGCCCTCGAGGTACAGA | + |
|
Preference number: 4 (lower is better) Translates to: NVNDQTWEIIEFSKWVEKCQGYP*EPSRYR Trigger: TCTGTACCTCGAGGGCTCCCATGGATAGCCTTGACA...TTTCTCTACCCATTTGGAGAACTCTATAATCTCCCAGGTTTGATCATTGACATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000529131.5 |
||
| 3UTR CAA 72 bp | TTGTACAGTTGTAGCAGTTTAGGGACTACTAACATTTaGCTCCAATCCGGTGGATGTCTAGGAAAGACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LYSCSSLGTTNI*LQSGGCLGKTA Trigger: AGCTGTCTTTCCTAGACATCCACCGGATTGGAGCAAAATGTTAGTAGTCCCTAAACTGCTACAACTGTACAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000495399.1 |
||
| CDS-3UTR GCA 90 bp | AGGGATAAGCATGTGGCTGATAATCATATGGTGGAACATAATCTTCTGAGTACGTCAATGCACACATTTTaGTCCAATCCGGTGGATGTC | + |
|
Preference number: 4 (lower is better) Translates to: RDKHVADNHMVEHNLLSTSMHTF*SNPVDV Trigger: GACATCCACCGGATTGGAGCAAAATGTGTGCATTGA...CGTACTCAGAAGATTATGTTCCACCATATGATTATCAGCCACATGCTTATCCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000529446.5 |
||
| CDS-3UTR CCA 90 bp | AAAGGCAAGTCGAAGATGTCATGTAAAGGGCATTTTGTTGACCTTGGCTCACCCCTATATCATAACCTTTaGGAAAAGCTTCTCTGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: KGKSKMSCKGHFVDLGSPLYHNL*EKLLCH Trigger: GTGACAGAGAAGCTTTTCCCAAAGGTTATGATATAG...GGGTGAGCCAAGGTCAACAAAATGCCCTTTACATGACATCTTCGACTTGCCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000480564.1 |
||
| CDS-3UTR CCA 90 bp | CGTGAACTGAGAACGGCATTTTCTGTGGACTATGGAATAATCATCTTGACAGGGATAGGGAAGAACATGTaGCTGATAATCATATGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: RELRTAFSVDYGIIILTGIGKNM*LIIIWW Trigger: CCACCATATGATTATCAGCCACATGTTCTTCCCTAT...CCCTGTCAAGATGATTATTCCATAGTCCACAGAAAATGCCGTTCTCAGTTCACG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000529131.5 |
||
| CDS-3UTR TCA 90 bp | ATGGTGGAACATAATCTTCTGAGTACGTTGTCAATGCACACATTTTGCTCCAATTTTAGATCCGTGAACTaGGAACGGCATTTTCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: MVEHNLLSTLSMHTFCSNFRSVN*ERHFLW Trigger: CCACAGAAAATGCCGTTCTCAGTTCACGGATCTAAA...ATTGGAGCAAAATGTGTGCATTGACAACGTACTCAGAAGATTATGTTCCACCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000529131.5 ENST00000529446.5 |
||
| CDS-3UTR TCA 90 bp | ACAGGGATAAGCAGTTTTGAGGACTTTAGAATGTCAATGATCAAACCTGGGAGAAACCATTTAGATCCGTaGACTGAGAACGGCATTTTC | + |
|
Preference number: 4 (lower is better) Translates to: TGISSFEDFRMSMIKPGRNHLDP*TENGIF Trigger: GAAAATGCCGTTCTCAGTTCACGGATCTAAATGGTT...TCTCCCAGGTTTGATCATTGACATTCTAAAGTCCTCAAAACTGCTTATCCCTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000529131.5 |
||
| CDS-3UTR TCA 90 bp | GTGGCTGATAATCATATGGTGGAACATAATCTTCTGAGTACGTTGTCAATGCACGGCTTAGAGAAGAGTTaGAATGAAGAGGAGGAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: VADNHMVEHNLLSTLSMHGLEKS*NEEEED Trigger: ATCTTCCTCCTCTTCATTTCAACTCTTCTCTAAGCC...GTGCATTGACAACGTACTCAGAAGATTATGTTCCACCATATGATTATCAGCCAC 41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000529131.5 |
||
| CDS-3UTR GCA 90 bp | GTGGCTGATAATCATATGGTGGAACATAATCTTCTGAGTACGTTGTCAATGCACATCCCACTCTCATCATaGCAAGTGTTGATGCCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: VADNHMVEHNLLSTLSMHIPLSS*QVLMPN Trigger: ATTTGGCATCAACACTTGGCATGATGAGAGTGGGAT...GTGCATTGACAACGTACTCAGAAGATTATGTTCCACCATATGATTATCAGCCAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000529131.5 ENST00000529446.5 |
||
| CDS-3UTR GCA 90 bp | AAACATTTGGTTAAAGGCAAGTCGAAGATGTCATGTAAAGGGCATTTTGTTGACACCCTGTCATACCTTTaGCCCTGCAAACAAACCTTC | + |
|
Preference number: 4 (lower is better) Translates to: KHLVKGKSKMSCKGHFVDTLSYL*PCKQTF Trigger: GAAGGTTTGTTTGCAGGGGCAAAGGTATGACAGGGT...GTCAACAAAATGCCCTTTACATGACATCTTCGACTTGCCTTTAACCAAATGTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000480564.1 ENST00000495399.1 |
||
| CDS-3UTR CCA 90 bp | AAACATTTGGTTAAAGGCAAGTCGAAGATGTCATGTAAAGGGCATTTTGTTGACTTTGCTCCAATCCGGTaGATGTCTAGGAAAGACAGC | + |
|
Preference number: 4 (lower is better) Translates to: KHLVKGKSKMSCKGHFVDFAPIR*MSRKDS Trigger: GCTGTCTTTCCTAGACATCCACCGGATTGGAGCAAA...GTCAACAAAATGCCCTTTACATGACATCTTCGACTTGCCTTTAACCAAATGTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000480564.1 ENST00000495399.1 |
||
| CDS-3UTR CCA 90 bp | AGGGATAAGCATGTGGCTGATAATCATATGGTGGAACATAATCTTCTGAGTACGACAGGGATAAGCATGTaGCTGATAATCATATGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: RDKHVADNHMVEHNLLSTTGISM*LIIIWW Trigger: CCACCATATGATTATCAGCCACATGCTTATCCCTGT...CGTACTCAGAAGATTATGTTCCACCATATGATTATCAGCCACATGCTTATCCCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000529446.5 |
||
| CDS-3UTR GCA 90 bp | ATCTTGACAGGGATAAGCAGTTTTGAGGACTTTAGAATGTCAATGATCAAACCTTCAATGCACACATTTTaGTCCAATCCGGTGGATGTC | + |
|
Preference number: 4 (lower is better) Translates to: ILTGISSFEDFRMSMIKPSMHTF*SNPVDV Trigger: GACATCCACCGGATTGGAGCAAAATGTGTGCATTGA...AGGTTTGATCATTGACATTCTAAAGTCCTCAAAACTGCTTATCCCTGTCAAGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000529131.5 |
||
| CDS-3UTR GCA 90 bp | CGTGAACTGAGAACGGCATTTTCTGTGGACTATGGAATAATCATCTTGACAGGGAGAGAAAATATCCTTTaGTATGAAGGCTTAGAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: RELRTAFSVDYGIIILTGRENIL*YEGLEK Trigger: CTTCTCTAAGCCTTCATAGCAAAGGATATTTTCTCT...CCCTGTCAAGATGATTATTCCATAGTCCACAGAAAATGCCGTTCTCAGTTCACG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000529131.5 |
||
| 3UTR CAA 72 bp | GATAATCATATGGTGGAACATAATCTTCTGAGTACGTaGTCAATGCACACATTTTGCTCCAATCCGGTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: DNHMVEHNLLST*SMHTFCSNPVD Trigger: ATCCACCGGATTGGAGCAAAATGTGTGCATTGACAACGTACTCAGAAGATTATGTTCCACCATATGATTATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000529131.5 ENST00000529446.5 |
||
| CDS-3UTR TCA 90 bp | TTAAATTGGCACAATAGGCCCACTAGTCAAGGGATAGAGTTTCTGTTTTACATCTGGAACATAATCTTCTaGGTACGTTGTCAATGCACA | + |
|
Preference number: 4 (lower is better) Translates to: LNWHNRPTSQGIEFLFYIWNIIF*VRCQCT Trigger: TGTGCATTGACAACGTACTCAGAAGATTATGTTCCA...GATGTAAAACAGAAACTCTATCCCTTGACTAGTGGGCCTATTGTGCCAATTTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000529131.5 ENST00000529446.5 |
||
| CDS-3UTR GCA 90 bp | TGGTTAAAGGCAAGTCGAAGATGTCATGTAAAGGGCATTTTGTTGACCTTGGCTCATTCAATAAAGCCTTaGTCTTCATTTCAACCCATT | + |
|
Preference number: 4 (lower is better) Translates to: WLKASRRCHVKGILLTLAHSIKP*SSFQPI Trigger: AATGGGTTGAAATGAAGAGCAAGGCTTTATTGAATG...AGCCAAGGTCAACAAAATGCCCTTTACATGACATCTTCGACTTGCCTTTAACCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000480564.1 ENST00000495399.1 |
||
| CDS-3UTR CCA 90 bp | TGGTTAAAGGCAAGTCGAAGATGTCATGTAAAGGGCATTTTGTTGACCTTGGCTAAAGGAGAAAACATTTaGTTAAAGGCAAGTCGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: WLKASRRCHVKGILLTLAKGENI*LKASRR Trigger: TCTTCGACTTGCCTTTAACCAAATGTTTTCTCCTTT...AGCCAAGGTCAACAAAATGCCCTTTACATGACATCTTCGACTTGCCTTTAACCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000480564.1 ENST00000495399.1 |
||
| CDS-3UTR GCA 90 bp | AGGGAAGAACATGTGGCTGATAATCATATGGTGGAACATAATCTTCTGAGTACGCATTCAATAAAGCCTTaGTCTTCATTTCAACCCATT | + |
|
Preference number: 4 (lower is better) Translates to: REEHVADNHMVEHNLLSTHSIKP*SSFQPI Trigger: AATGGGTTGAAATGAAGAGCAAGGCTTTATTGAATG...CGTACTCAGAAGATTATGTTCCACCATATGATTATCAGCCACATGTTCTTCCCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000529131.5 |
||
| CDS-3UTR CCA 90 bp | TTAAATTGGCACAATAGGCCCACTAGTCAAGGGATAGAGTTTCTGTTTTACATCCTATATCATAACCTTTaGGAAAAGCTTCTCTGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: LNWHNRPTSQGIEFLFYILYHNL*EKLLCH Trigger: GTGACAGAGAAGCTTTTCCCAAAGGTTATGATATAG...GATGTAAAACAGAAACTCTATCCCTTGACTAGTGGGCCTATTGTGCCAATTTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000527647.5 |
||
| CDS-3UTR GCA 90 bp | TTAAATTGGCACAATAGGCCCACTAGTCAAGGGATAGAGTTTCTGTTTTACATCCATTCAATAAAGCCTTaGTCTTCATTTCAACCCATT | + |
|
Preference number: 4 (lower is better) Translates to: LNWHNRPTSQGIEFLFYIHSIKP*SSFQPI Trigger: AATGGGTTGAAATGAAGAGCAAGGCTTTATTGAATG...GATGTAAAACAGAAACTCTATCCCTTGACTAGTGGGCCTATTGTGCCAATTTAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000527647.5 ENST00000529131.5 ENST00000529446.5 |
||
| CDS-3UTR GCA 90 bp | AAACCTTCTGAATCAAGAAACATTTTGTACAGTTGTAGCAGTTTAGGGACTACTCATTCAATAAAGCCTTaGTCTTCATTTCAACCCATT | + |
|
Preference number: 4 (lower is better) Translates to: KPSESRNILYSCSSLGTTHSIKP*SSFQPI Trigger: AATGGGTTGAAATGAAGAGCAAGGCTTTATTGAATG...AGTAGTCCCTAAACTGCTACAACTGTACAAAATGTTTCTTGATTCAGAAGGTTT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000495399.1 |
||
| CDS-3UTR CCA 90 bp | AAACCTTCTGAATCAAGAAACATTTTGTACAGTTGTAGCAGTTTAGGGACTACTAAAGGAGAAAACATTTaGTTAAAGGCAAGTCGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: KPSESRNILYSCSSLGTTKGENI*LKASRR Trigger: TCTTCGACTTGCCTTTAACCAAATGTTTTCTCCTTT...AGTAGTCCCTAAACTGCTACAACTGTACAAAATGTTTCTTGATTCAGAAGGTTT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000495399.1 |
||
| CDS CCA 90 bp | ATGGGAGCGGAGGGTCAGGGAGCCCTTGCGCTCCACCAAGTCCGGTaGTCCGATCTCCAACCAGTGTTGCTTCCTGTCGCACCAGTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: MGAEGQGALALHQVR*SDLQPVLLPVAPVL Trigger: CAGGACTGGTGCGACAGGAAGCAACACTGGTTGGAGATCGGACCACCGGACTTGGTGGAGCGCAAGGGCTCCCTGACCCTCCGCTCCCAT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000377197.8 ENST00000466872.2 ENST00000527647.5 ENST00000529131.5 ENST00000529446.5 |
||
| CDS GCA 90 bp | CCCTTGCGCTCCACCAAGTCCGGTGGTCCGATCTCCAACCAGTGTTaGTTCCTGTCGCACCAGTCCTGGCAGGATCTGTCAAGGCTATCC | + |
|
Preference number: 5 (lower is better) Translates to: PLRSTKSGGPISNQC*FLSHQSWQDLSRLS Trigger: GGATAGCCTTGACAGATCCTGCCAGGACTGGTGCGACAGGAAGCAACACTGGTTGGAGATCGGACCACCGGACTTGGTGGAGCGCAAGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000377197.8 ENST00000466872.2 ENST00000527647.5 ENST00000529131.5 ENST00000529446.5 |
||
| CDS TCA 90 bp | TCACGGTGCCAGGAATACACCAACACCGGCTTCGAGTATTTCTTGTaGTGGGAGCGGAGGGTCAGGGAGCCCTTGCGCTCCACCAAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: SRCQEYTNTGFEYFL*WERRVREPLRSTKS Trigger: GGACTTGGTGGAGCGCAAGGGCTCCCTGACCCTCCGCTCCCATCACAAGAAATACTCGAAGCCGGTGTTGGTGTATTCCTGGCACCGTGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000377197.8 ENST00000527647.5 |
||
| CDS GCA 90 bp | GCTTCGAGTATTTCTTGTGATGGGAGCGGAGGGTCAGGGAGCCCTTaGGCTCCACCAAGTCCGGTGGTCCGATCTCCAACCAGTGTTGCT | + |
|
Preference number: 5 (lower is better) Translates to: ASSISCDGSGGSGSP*APPSPVVRSPTSVA Trigger: AGCAACACTGGTTGGAGATCGGACCACCGGACTTGGTGGAGCGCAAGGGCTCCCTGACCCTCCGCTCCCATCACAAGAAATACTCGAAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000377197.8 ENST00000466872.2 ENST00000495399.1 ENST00000527647.5 ENST00000529131.5 ENST00000529446.5 |
||
| CDS CCA 90 bp | GCTTCCTGTCGCACCAGTCCTGGCAGGATCTGTCAAGGCTATCCATaGGAGCCCTCGAGGTACAGACCTCTGAGGAGTTCCCTATGCACC | + |
|
Preference number: 5 (lower is better) Translates to: ASCRTSPGRICQGYP*EPSRYRPLRSSLCT Trigger: GGTGCATAGGGAACTCCTCAGAGGTCTGTACCTCGAGGGCTCCCATGGATAGCCTTGACAGATCCTGCCAGGACTGGTGCGACAGGAAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000377197.8 ENST00000466872.2 ENST00000527647.5 ENST00000529131.5 ENST00000529446.5 |
||
| CDS CCA 90 bp | GGTGGTCCGATCTCCAACCAGTGTTGCTTCCTGTCGCACCAGTCCTaGCAGGATCTGTCAAGGCTATCCATGGGAGCCCTCGAGGTACAG | + |
|
Preference number: 5 (lower is better) Translates to: GGPISNQCCFLSHQS*QDLSRLSMGALEVQ Trigger: CTGTACCTCGAGGGCTCCCATGGATAGCCTTGACAGATCCTGCCAGGACTGGTGCGACAGGAAGCAACACTGGTTGGAGATCGGACCACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000377197.8 ENST00000466872.2 ENST00000527647.5 ENST00000529131.5 ENST00000529446.5 |
||
| CDS-3UTR CAA 90 bp | AGGCAATCCGGTGACCCTTTCGATAATCCCGGAGCTCACTGTTTCCTCATTCAAAGGGTCAGGGAGCCCTaGCGCTCCACCAAGTCCGGT | + |
|
Preference number: 5 (lower is better) Translates to: RQSGDPFDNPGAHCFLIQRVREP*RSTKSG Trigger: ACCGGACTTGGTGGAGCGCAAGGGCTCCCTGACCCT...TTGAATGAGGAAACAGTGAGCTCCGGGATTATCGAAAGGGTCACCGGATTGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000495399.1 ENST00000529131.5 ENST00000529446.5 |
||
| CDS TCA 90 bp | TGTCCAAATCAGGAATACACCAACACCGGCTTCGAGTATTTCTTGTaGTGGGAGCGGAGGGTCAGGGAGCCCTTGCGCTCCACCAAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: CPNQEYTNTGFEYFL*WERRVREPLRSTKS Trigger: GGACTTGGTGGAGCGCAAGGGCTCCCTGACCCTCCGCTCCCATCACAAGAAATACTCGAAGCCGGTGTTGGTGTATTCCTGATTTGGACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000466872.2 ENST00000495399.1 ENST00000529131.5 ENST00000529446.5 |
||
| CDS-3UTR CAA 90 bp | TTAAATTGGCACAATAGGCCCACTAGTCAAGGGATAGAGTTTCTGTTTTACATCAGGGTCAGGGAGCCCTaGCGCTCCACCAAGTCCGGT | + |
|
Preference number: 5 (lower is better) Translates to: LNWHNRPTSQGIEFLFYIRVREP*RSTKSG Trigger: ACCGGACTTGGTGGAGCGCAAGGGCTCCCTGACCCT...GATGTAAAACAGAAACTCTATCCCTTGACTAGTGGGCCTATTGTGCCAATTTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000527647.5 ENST00000529131.5 ENST00000529446.5 |
||
| CDS-3UTR CAA 90 bp | AGGGATAAGCATGTGGCTGATAATCATATGGTGGAACATAATCTTCTGAGTACGGATCTCCAACCAGTGTaGCTTCCTGTCGCACCAGTC | + |
|
Preference number: 5 (lower is better) Translates to: RDKHVADNHMVEHNLLSTDLQPV*LPVAPV Trigger: GACTGGTGCGACAGGAAGCAACACTGGTTGGAGATC...CGTACTCAGAAGATTATGTTCCACCATATGATTATCAGCCACATGCTTATCCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000529446.5 |
||
| CDS-3UTR CAA 90 bp | TTAAATTGGCACAATAGGCCCACTAGTCAAGGGATAGAGTTTCTGTTTTACATCGATCTCCAACCAGTGTaGCTTCCTGTCGCACCAGTC | + |
|
Preference number: 5 (lower is better) Translates to: LNWHNRPTSQGIEFLFYIDLQPV*LPVAPV Trigger: GACTGGTGCGACAGGAAGCAACACTGGTTGGAGATC...GATGTAAAACAGAAACTCTATCCCTTGACTAGTGGGCCTATTGTGCCAATTTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000527647.5 ENST00000529131.5 ENST00000529446.5 |
||
| CDS-3UTR CAA 90 bp | ATGGTGGAACATAATCTTCTGAGTACGTTGTCAATGCACACATTTTGCTCCAATGATCTCCAACCAGTGTaGCTTCCTGTCGCACCAGTC | + |
|
Preference number: 5 (lower is better) Translates to: MVEHNLLSTLSMHTFCSNDLQPV*LPVAPV Trigger: GACTGGTGCGACAGGAAGCAACACTGGTTGGAGATC...ATTGGAGCAAAATGTGTGCATTGACAACGTACTCAGAAGATTATGTTCCACCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000529131.5 ENST00000529446.5 |
||
| CDS-3UTR CAA 90 bp | CTTTCGATAATCCCGGAGCTCACTGTTTCCTCATTCAATAAAGCCTTGCTCTTCGTCAATGCACACATTTaGCTCCAATCCGGTGGATGT | + |
|
Preference number: 5 (lower is better) Translates to: LSIIPELTVSSFNKALLFVNAHI*LQSGGC Trigger: ACATCCACCGGATTGGAGCAAAATGTGTGCATTGAC...GAAGAGCAAGGCTTTATTGAATGAGGAAACAGTGAGCTCCGGGATTATCGAAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000529131.5 ENST00000529446.5 |
||
| CDS-3UTR CAA 90 bp | TTAAAGGCAAGTCGAAGATGTCATGTAAAGGGCATTTTGTTGACCTTGGCTCACGGGACTACTAACATTTaGCTCCAATCCGGTGGATGT | + |
|
Preference number: 5 (lower is better) Translates to: LKASRRCHVKGILLTLAHGTTNI*LQSGGC Trigger: ACATCCACCGGATTGGAGCAAAATGTTAGTAGTCCC...GTGAGCCAAGGTCAACAAAATGCCCTTTACATGACATCTTCGACTTGCCTTTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000480564.1 ENST00000495399.1 |
||
| CDS-3UTR CAA 90 bp | TTGTACAGTTGTAGCAGTTTAGGGACTACTAACATTTTGCTCCAATCCGGTGGACATGTAAAGGGCATTTaGTTGACCTTGGCTCACCCT | + |
|
Preference number: 5 (lower is better) Translates to: LYSCSSLGTTNILLQSGGHVKGI*LTLAHP Trigger: AGGGTGAGCCAAGGTCAACAAAATGCCCTTTACATG...TCCACCGGATTGGAGCAAAATGTTAGTAGTCCCTAAACTGCTACAACTGTACAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000495399.1 |
||
| CDS-3UTR CAA 90 bp | TTAAAGGCAAGTCGAAGATGTCATGTAAAGGGCATTTTGTTGACCTTGGCTCACTTTCTGATGTCCAAATaGGGGATTCATCGGTTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: LKASRRCHVKGILLTLAHFLMSK*GIHRFP Trigger: TGGGAACCGATGAATCCCCAATTTGGACATCAGAAA...GTGAGCCAAGGTCAACAAAATGCCCTTTACATGACATCTTCGACTTGCCTTTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000480564.1 |
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| CDS-3UTR CAA 90 bp | ATTTTGTACAGTTGTAGCAGTTTAGGGACTACTAACATTTTGCTCCAATCCGGTCACCCTGTCATACCTTaGCCCCTGCAAACAAACCTT | + |
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Preference number: 5 (lower is better) Translates to: ILYSCSSLGTTNILLQSGHPVIP*PLQTNL Trigger: AAGGTTTGTTTGCAGGGGCAAAGGTATGACAGGGTG...ACCGGATTGGAGCAAAATGTTAGTAGTCCCTAAACTGCTACAACTGTACAAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000495399.1 |
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| CDS-3UTR CAA 90 bp | ATTTGGTTAAAGGCAAGTCGAAGATGTCATGTAAAGGGCATTTTGTTGACCTTGGTAAAGGGCATTTTGTaGACCTTGGCTCACCCTGTC | + |
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Preference number: 5 (lower is better) Translates to: IWLKASRRCHVKGILLTLVKGIL*TLAHPV Trigger: GACAGGGTGAGCCAAGGTCAACAAAATGCCCTTTAC...CAAGGTCAACAAAATGCCCTTTACATGACATCTTCGACTTGCCTTTAACCAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000480564.1 ENST00000495399.1 |
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| CDS-3UTR CAA 90 bp | ATTTTGTACAGTTGTAGCAGTTTAGGGACTACTAACATTTTGCTCCAATCCGGTGTAAAGGGCATTTTGTaGACCTTGGCTCACCCTGTC | + |
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Preference number: 5 (lower is better) Translates to: ILYSCSSLGTTNILLQSGVKGIL*TLAHPV Trigger: GACAGGGTGAGCCAAGGTCAACAAAATGCCCTTTAC...ACCGGATTGGAGCAAAATGTTAGTAGTCCCTAAACTGCTACAACTGTACAAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000495399.1 |
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| CDS-3UTR CAA 90 bp | TTAAATTGGCACAATAGGCCCACTAGTCAAGGGATAGAGTTTCTGTTTTACATCGTCAATGCACACATTTaGCTCCAATCCGGTGGATGT | + |
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Preference number: 5 (lower is better) Translates to: LNWHNRPTSQGIEFLFYIVNAHI*LQSGGC Trigger: ACATCCACCGGATTGGAGCAAAATGTGTGCATTGAC...GATGTAAAACAGAAACTCTATCCCTTGACTAGTGGGCCTATTGTGCCAATTTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000529131.5 ENST00000529446.5 |
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| CDS-3UTR CAA 90 bp | CTTTCGATAATCCCGGAGCTCACTGTTTCCTCATTCAATAAAGCCTTGCTCTTCAATCTTCTGAGTACGTaGTCAATGCACACATTTTGC | + |
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Preference number: 5 (lower is better) Translates to: LSIIPELTVSSFNKALLFNLLST*SMHTFC Trigger: GCAAAATGTGTGCATTGACAACGTACTCAGAAGATT...GAAGAGCAAGGCTTTATTGAATGAGGAAACAGTGAGCTCCGGGATTATCGAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000529131.5 ENST00000529446.5 |
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| CDS-3UTR CAA 90 bp | CGTGAACTGAGAACGGCATTTTCTGTGGACTATGGAATAATCATCTTGACAGGGTATGGAATAATCATCTaGACAGGGATAAGCATGTGG | + |
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Preference number: 5 (lower is better) Translates to: RELRTAFSVDYGIIILTGYGIII*TGISMW Trigger: CCACATGCTTATCCCTGTCAAGATGATTATTCCATA...CCCTGTCAAGATGATTATTCCATAGTCCACAGAAAATGCCGTTCTCAGTTCACG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000529446.5 |
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| CDS-3UTR CAA 90 bp | ATTTGGTTAAAGGCAAGTCGAAGATGTCATGTAAAGGGCATTTTGTTGACCTTGGGGACTACTAACATTTaGCTCCAATCCGGTGGATGT | + |
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Preference number: 5 (lower is better) Translates to: IWLKASRRCHVKGILLTLGTTNI*LQSGGC Trigger: ACATCCACCGGATTGGAGCAAAATGTTAGTAGTCCC...CAAGGTCAACAAAATGCCCTTTACATGACATCTTCGACTTGCCTTTAACCAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000480564.1 ENST00000495399.1 |
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| CDS-3UTR CAA 90 bp | TTAAATTGGCACAATAGGCCCACTAGTCAAGGGATAGAGTTTCTGTTTTACATCACAGGGATAAGCATTTaGCTCCAATCCGGTGGATGT | + |
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Preference number: 5 (lower is better) Translates to: LNWHNRPTSQGIEFLFYITGISI*LQSGGC Trigger: ACATCCACCGGATTGGAGCAAAATGCTTATCCCTGT...GATGTAAAACAGAAACTCTATCCCTTGACTAGTGGGCCTATTGTGCCAATTTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000527647.5 |
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| CDS-3UTR CAA 90 bp | TTAAATTGGCACAATAGGCCCACTAGTCAAGGGATAGAGTTTCTGTTTTACATCTTTCTGATGTCCAAATaGGGGATTCATCGGTTCCCA | + |
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Preference number: 5 (lower is better) Translates to: LNWHNRPTSQGIEFLFYIFLMSK*GIHRFP Trigger: TGGGAACCGATGAATCCCCAATTTGGACATCAGAAA...GATGTAAAACAGAAACTCTATCCCTTGACTAGTGGGCCTATTGTGCCAATTTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000527647.5 |
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| CDS-3UTR CAA 90 bp | AGAAAACATTTGGTTAAAGGCAAGTCGAAGATGTCATGTAAAGGGCATTTTGTTCACCCTGTCATACCTTaGCCCCTGCAAACAAACCTT | + |
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Preference number: 5 (lower is better) Translates to: RKHLVKGKSKMSCKGHFVHPVIP*PLQTNL Trigger: AAGGTTTGTTTGCAGGGGCAAAGGTATGACAGGGTG...AACAAAATGCCCTTTACATGACATCTTCGACTTGCCTTTAACCAAATGTTTTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000480564.1 ENST00000495399.1 |
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| CDS-3UTR CAA 90 bp | AAACATTTGGTTAAAGGCAAGTCGAAGATGTCATGTAAAGGGCATTTTGTTGACCATGTAAAGGGCATTTaGTTGACCTTGGCTCACCCT | + |
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Preference number: 5 (lower is better) Translates to: KHLVKGKSKMSCKGHFVDHVKGI*LTLAHP Trigger: AGGGTGAGCCAAGGTCAACAAAATGCCCTTTACATG...GTCAACAAAATGCCCTTTACATGACATCTTCGACTTGCCTTTAACCAAATGTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000480564.1 ENST00000495399.1 |
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| CDS-3UTR CAA 90 bp | AGGGATAAGCATGTGGCTGATAATCATATGGTGGAACATAATCTTCTGAGTACGAATCTTCTGAGTACGTaGTCAATGCACACATTTTGC | + |
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Preference number: 5 (lower is better) Translates to: RDKHVADNHMVEHNLLSTNLLST*SMHTFC Trigger: GCAAAATGTGTGCATTGACAACGTACTCAGAAGATT...CGTACTCAGAAGATTATGTTCCACCATATGATTATCAGCCACATGCTTATCCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000529446.5 |
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| CDS-3UTR CAA 90 bp | GTGGCTGATAATCATATGGTGGAACATAATCTTCTGAGTACGTTGTCAATGCACTCATCATGCCAAGTGTaGATGCCAAATCTTTTAGAA | + |
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Preference number: 5 (lower is better) Translates to: VADNHMVEHNLLSTLSMHSSCQV*MPNLLE Trigger: TTCTAAAAGATTTGGCATCAACACTTGGCATGATGA...GTGCATTGACAACGTACTCAGAAGATTATGTTCCACCATATGATTATCAGCCAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000529131.5 ENST00000529446.5 |
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| CDS-3UTR CAA 90 bp | AACATTTGGTTAAAGGCAAGTCGAAGATGTCATGTAAAGGGCATTTTGTTGACCGAAAGGAGAAAACATTaGGTTAAAGGCAAGTCGAAG | + |
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Preference number: 5 (lower is better) Translates to: NIWLKASRRCHVKGILLTERRKH*VKGKSK Trigger: CTTCGACTTGCCTTTAACCAAATGTTTTCTCCTTTC...GGTCAACAAAATGCCCTTTACATGACATCTTCGACTTGCCTTTAACCAAATGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000480564.1 ENST00000495399.1 |
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| CDS-3UTR CAA 90 bp | ATTTTGTACAGTTGTAGCAGTTTAGGGACTACTAACATTTTGCTCCAATCCGGTGAAAGGAGAAAACATTaGGTTAAAGGCAAGTCGAAG | + |
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Preference number: 5 (lower is better) Translates to: ILYSCSSLGTTNILLQSGERRKH*VKGKSK Trigger: CTTCGACTTGCCTTTAACCAAATGTTTTCTCCTTTC...ACCGGATTGGAGCAAAATGTTAGTAGTCCCTAAACTGCTACAACTGTACAAAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000495399.1 |
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| CDS-3UTR CAA 90 bp | AATGTCAATGATCAAACCTGGGAGATTATAGAGTTCTCCAAATGGGTAGAGAAATCATCATGCCAAGTGTaGATGCCAAATCTTTTAGAA | + |
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Preference number: 5 (lower is better) Translates to: NVNDQTWEIIEFSKWVEKSSCQV*MPNLLE Trigger: TTCTAAAAGATTTGGCATCAACACTTGGCATGATGA...TTTCTCTACCCATTTGGAGAACTCTATAATCTCCCAGGTTTGATCATTGACATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000529131.5 |
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| CDS CCA 72 bp | GAGGGTCAGGGAGCCCTTGCGCTCCACCAAGTCCGGTaGTCCGATCTCCAACCAGTGTTGCTTCCTGTCGCA | + |
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Preference number: 6 (lower is better) Translates to: EGQGALALHQVR*SDLQPVLLPVA Trigger: TGCGACAGGAAGCAACACTGGTTGGAGATCGGACCACCGGACTTGGTGGAGCGCAAGGGCTCCCTGACCCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000377197.8 ENST00000466872.2 ENST00000527647.5 ENST00000529131.5 ENST00000529446.5 |
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| CDS TCA 72 bp | AAGGCTATCCATGGGAGCCCTCGAGGTACAGACCTCTaGGGAGTTCCCTATGCACCTGTCCTGCCCGGCAGG | + |
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Preference number: 6 (lower is better) Translates to: KAIHGSPRGTDL*GVPYAPVLPGR Trigger: CCTGCCGGGCAGGACAGGTGCATAGGGAACTCCTCAGAGGTCTGTACCTCGAGGGCTCCCATGGATAGCCTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377197.8 |
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| CDS CAA 90 bp | GCCCTTGCGCTCCACCAAGTCCGGTGGTCCGATCTCCAACCAGTGTaGCTTCCTGTCGCACCAGTCCTGGCAGGATCTGTCAAGGCTATC | + |
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Preference number: 6 (lower is better) Translates to: ALALHQVRWSDLQPV*LPVAPVLAGSVKAI Trigger: GATAGCCTTGACAGATCCTGCCAGGACTGGTGCGACAGGAAGCAACACTGGTTGGAGATCGGACCACCGGACTTGGTGGAGCGCAAGGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000377197.8 ENST00000466872.2 ENST00000527647.5 ENST00000529131.5 ENST00000529446.5 |
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| CDS CCA 72 bp | CGCACCAGTCCTGGCAGGATCTGTCAAGGCTATCCATaGGAGCCCTCGAGGTACAGACCTCTGAGGAGTTCC | + |
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Preference number: 6 (lower is better) Translates to: RTSPGRICQGYP*EPSRYRPLRSS Trigger: GGAACTCCTCAGAGGTCTGTACCTCGAGGGCTCCCATGGATAGCCTTGACAGATCCTGCCAGGACTGGTGCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000377197.8 ENST00000466872.2 ENST00000527647.5 ENST00000529131.5 ENST00000529446.5 |
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| CDS TCA 72 bp | CAGGAATACACCAACACCGGCTTCGAGTATTTCTTGTaGTGGGAGCGGAGGGTCAGGGAGCCCTTGCGCTCC | + |
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Preference number: 6 (lower is better) Translates to: QEYTNTGFEYFL*WERRVREPLRS Trigger: GGAGCGCAAGGGCTCCCTGACCCTCCGCTCCCATCACAAGAAATACTCGAAGCCGGTGTTGGTGTATTCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000377197.8 ENST00000466872.2 ENST00000480564.1 ENST00000495399.1 ENST00000527647.5 ENST00000529131.5 ENST00000529446.5 |
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| CDS GCA 72 bp | TCCACCAAGTCCGGTGGTCCGATCTCCAACCAGTGTTaGTTCCTGTCGCACCAGTCCTGGCAGGATCTGTCA | + |
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Preference number: 6 (lower is better) Translates to: STKSGGPISNQC*FLSHQSWQDLS Trigger: TGACAGATCCTGCCAGGACTGGTGCGACAGGAAGCAACACTGGTTGGAGATCGGACCACCGGACTTGGTGGA 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000377197.8 ENST00000466872.2 ENST00000527647.5 ENST00000529131.5 ENST00000529446.5 |
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| CDS CCA 72 bp | ATCTCCAACCAGTGTTGCTTCCTGTCGCACCAGTCCTaGCAGGATCTGTCAAGGCTATCCATGGGAGCCCTC | + |
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Preference number: 6 (lower is better) Translates to: ISNQCCFLSHQS*QDLSRLSMGAL Trigger: GAGGGCTCCCATGGATAGCCTTGACAGATCCTGCCAGGACTGGTGCGACAGGAAGCAACACTGGTTGGAGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000377197.8 ENST00000466872.2 ENST00000527647.5 ENST00000529131.5 ENST00000529446.5 |
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| CDS TCA 72 bp | CAATTCTTGCCAGGCCCTCAGGTTGTGGTGATTTCCTaGGTAGTAGCAGCAGTACATTTTGCTCCAATCCGG | + |
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Preference number: 6 (lower is better) Translates to: QFLPGPQVVVIS*VVAAVHFAPIR Trigger: CCGGATTGGAGCAAAATGTACTGCTGCTACTACTCAGGAAATCACCACAACCTGAGGGCCTGGCAAGAATTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000466872.2 |
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| CDS CAA 72 bp | GATAATCATATGGTGGAACATAATCTTCTGAGTACGTaGTCAATGCACACCTGGGTGGTAACCACCAATTCT | + |
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Preference number: 6 (lower is better) Translates to: DNHMVEHNLLST*SMHTWVVTTNS Trigger: AGAATTGGTGGTTACCACCCAGGTGTGCATTGACAACGTACTCAGAAGATTATGTTCCACCATATGATTATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000466872.2 |
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