RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for C9ORF131 (Homo sapiens)

Ensembl gene IDs: ENSG00000174038

Ensembl transcript IDs: ENST00000312292.6, ENST00000354479.5, ENST00000378745.3, ENST00000416537.2, ENST00000421362.6

Found 521 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCCTATAGCCTTGAGGAGGCCCTCAGAACCACAGGATGGCTGGGGTaGGGCTGGAGTGGCTTGCTCTCCAGTGGGAGCTTCTTTGGTAGG +
Preference number: 1 (lower is better)
Translates to: PYSLEEALRTTGWLG*GWSGLLSSGSFFGR
Trigger: CCTACCAAAGAAGCTCCCACTGGAGAGCAAGCCACTCCAGCCCCACCCCAGCCATCCTGTGGTTCTGAGGGCCTCCTCAAGGCTATAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416537.2
3UTR CCA 90 bp GGGGAAGGATCTGGAAGGGCTCACGGGCTGCATGACTGTTTGCTCTaGTATCCCTATAGCCTTGAGGAGGCCCTCAGAACCACAGGATGG +
Preference number: 1 (lower is better)
Translates to: GEGSGRAHGLHDCLL*YPYSLEEALRTTGW
Trigger: CCATCCTGTGGTTCTGAGGGCCTCCTCAAGGCTATAGGGATACCAGAGCAAACAGTCATGCAGCCCGTGAGCCCTTCCAGATCCTTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416537.2
3UTR CCA 90 bp GCTGCTGGCGGTTCCCTGATGCTATCTTGTGCCTCACAGGAAAGCTaGTCAGAATCTGGAAGATGGGGAAGGATCTGGAAGGGCTCACGG +
Preference number: 1 (lower is better)
Translates to: AAGGSLMLSCASQES*SESGRWGRIWKGSR
Trigger: CCGTGAGCCCTTCCAGATCCTTCCCCATCTTCCAGATTCTGACCAGCTTTCCTGTGAGGCACAAGATAGCATCAGGGAACCGCCAGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416537.2
3UTR GCA 90 bp AAGATGGGGAAGGATCTGGAAGGGCTCACGGGCTGCATGACTGTTTaGTCTGGTATCCCTATAGCCTTGAGGAGGCCCTCAGAACCACAG +
Preference number: 1 (lower is better)
Translates to: KMGKDLEGLTGCMTV*SGIPIALRRPSEPQ
Trigger: CTGTGGTTCTGAGGGCCTCCTCAAGGCTATAGGGATACCAGAGCAAACAGTCATGCAGCCCGTGAGCCCTTCCAGATCCTTCCCCATCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416537.2
3UTR CCA 90 bp TGGAGTGGCTTGCTCTCCAGTGGGAGCTTCTTTGGTAGGAGAACATaGCTTCAGTGGATCCAGAGATGCCTCGTCTTCCCCCTCTTCCTC +
Preference number: 1 (lower is better)
Translates to: WSGLLSSGSFFGRRT*LQWIQRCLVFPLFL
Trigger: GAGGAAGAGGGGGAAGACGAGGCATCTCTGGATCCACTGAAGCCATGTTCTCCTACCAAAGAAGCTCCCACTGGAGAGCAAGCCACTCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416537.2
3UTR GCA 90 bp GGGAGCTTCTTTGGTAGGAGAACATGGCTTCAGTGGATCCAGAGATaGCTCGTCTTCCCCCTCTTCCTCTTCTTCCCCTTCTTCCTCCAC +
Preference number: 1 (lower is better)
Translates to: GSFFGRRTWLQWIQR*LVFPLFLFFPFFLH
Trigger: GTGGAGGAAGAAGGGGAAGAAGAGGAAGAGGGGGAAGACGAGGCATCTCTGGATCCACTGAAGCCATGTTCTCCTACCAAAGAAGCTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000416537.2
3UTR TCA 90 bp CTCGTCTTCCCCCTCTTCCTCTTCTTCCCCTTCTTCCTCCACTTCTaGTTTCTGCTTACACAGGTGATCAAGGAAGGCCACACGGTGCAG +
Preference number: 1 (lower is better)
Translates to: LVFPLFLFFPFFLHF*FLLTQVIKEGHTVQ
Trigger: CTGCACCGTGTGGCCTTCCTTGATCACCTGTGTAAGCAGAAATCAGAAGTGGAGGAAGAAGGGGAAGAAGAGGAAGAGGGGGAAGACGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000416537.2
3UTR TCA 90 bp GAGACCCCAGAAGAGCTGGCTTTTTCTCTGCTGCTGGCGGTTCCCTaGTGCTATCTTGTGCCTCACAGGAAAGCTGGTCAGAATCTGGAA +
Preference number: 1 (lower is better)
Translates to: ETPEELAFSLLLAVP*CYLVPHRKAGQNLE
Trigger: TTCCAGATTCTGACCAGCTTTCCTGTGAGGCACAAGATAGCATCAGGGAACCGCCAGCAGCAGAGAAAAAGCCAGCTCTTCTGGGGTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000416537.2
3UTR CCA 90 bp TTCCCTGATGCTATCTTGTGCCTCACAGGAAAGCTGGTCAGAATCTaGAAGATGGGGAAGGATCTGGAAGGGCTCACGGGCTGCATGACT +
Preference number: 1 (lower is better)
Translates to: FPDAILCLTGKLVRI*KMGKDLEGLTGCMT
Trigger: AGTCATGCAGCCCGTGAGCCCTTCCAGATCCTTCCCCATCTTCCAGATTCTGACCAGCTTTCCTGTGAGGCACAAGATAGCATCAGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416537.2
3UTR CAA 90 bp GGGCTCACGGGCTGCATGACTGTTTGCTCTGGTATCCCTATAGCCTaGAGGAGGCCCTCAGAACCACAGGATGGCTGGGGTGGGGCTGGA +
Preference number: 2 (lower is better)
Translates to: GLTGCMTVCSGIPIA*RRPSEPQDGWGGAG
Trigger: TCCAGCCCCACCCCAGCCATCCTGTGGTTCTGAGGGCCTCCTCAAGGCTATAGGGATACCAGAGCAAACAGTCATGCAGCCCGTGAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416537.2
3UTR-3UTR CCA 90 bp AGGGCTCACGGGCTGCATGACTGTTTGCTCTGGTATCCCTATAGCCTTGAGGAGCTCAGAACCACAGGATaGCTGGGGTGGGGCTGGAGT +
Preference number: 2 (lower is better)
Translates to: RAHGLHDCLLWYPYSLEELRTTG*LGWGWS
Trigger: ACTCCAGCCCCACCCCAGCCATCCTGTGGTTCTGAG...CTCCTCAAGGCTATAGGGATACCAGAGCAAACAGTCATGCAGCCCGTGAGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416537.2
3UTR-3UTR CCA 90 bp GGTTCCCTGATGCTATCTTGTGCCTCACAGGAAAGCTGGTCAGAATCTGGAAGAGGGGTGGGGCTGGAGTaGCTTGCTCTCCAGTGGGAG +
Preference number: 2 (lower is better)
Translates to: GSLMLSCASQESWSESGRGVGLE*LALQWE
Trigger: CTCCCACTGGAGAGCAAGCCACTCCAGCCCCACCCC...TCTTCCAGATTCTGACCAGCTTTCCTGTGAGGCACAAGATAGCATCAGGGAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416537.2
3UTR CAA 90 bp GAAGATGGGGAAGGATCTGGAAGGGCTCACGGGCTGCATGACTGTTaGCTCTGGTATCCCTATAGCCTTGAGGAGGCCCTCAGAACCACA +
Preference number: 2 (lower is better)
Translates to: EDGEGSGRAHGLHDC*LWYPYSLEEALRTT
Trigger: TGTGGTTCTGAGGGCCTCCTCAAGGCTATAGGGATACCAGAGCAAACAGTCATGCAGCCCGTGAGCCCTTCCAGATCCTTCCCCATCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416537.2
3UTR-3UTR TCA 90 bp GGGAGCTTCTTTGGTAGGAGAACATGGCTTCAGTGGATCCAGAGATGCCTCGTCTTCTGCTTACACAGGTaGTCAAGGAAGGCCACACGG +
Preference number: 2 (lower is better)
Translates to: GSFFGRRTWLQWIQRCLVFCLHR*SRKATR
Trigger: CCGTGTGGCCTTCCTTGATCACCTGTGTAAGCAGAA...GACGAGGCATCTCTGGATCCACTGAAGCCATGTTCTCCTACCAAAGAAGCTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416537.2
3UTR-3UTR TCA 90 bp GGTTCCCTGATGCTATCTTGTGCCTCACAGGAAAGCTGGTCAGAATCTGGAAGAGGCTCACGGGCTGCATaGCTGTTTGCTCTGGTATCC +
Preference number: 2 (lower is better)
Translates to: GSLMLSCASQESWSESGRGSRAA*LFALVS
Trigger: GGATACCAGAGCAAACAGTCATGCAGCCCGTGAGCC...TCTTCCAGATTCTGACCAGCTTTCCTGTGAGGCACAAGATAGCATCAGGGAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416537.2
3UTR-3UTR GCA 90 bp GGAGCTTCTTTGGTAGGAGAACATGGCTTCAGTGGATCCAGAGATGCCTCGTCTAGGAAGGCCACACGGTaGAGAAGTGGTAGTTCCTGG +
Preference number: 2 (lower is better)
Translates to: GASLVGEHGFSGSRDASSRKATR*RSGSSW
Trigger: CCAGGAACTACCACTTCTGCACCGTGTGGCCTTCCT...AGACGAGGCATCTCTGGATCCACTGAAGCCATGTTCTCCTACCAAAGAAGCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416537.2
3UTR-3UTR CCA 90 bp GGGAGACCCCAGAAGAGCTGGCTTTTTCTCTGCTGCTGGCGGTTCCCTGATGCTAGAAGTGGTAGTTCCTaGGCCCACATTCATACCAAT +
Preference number: 2 (lower is better)
Translates to: GRPQKSWLFLCCWRFPDARSGSS*AHIHTN
Trigger: ATTGGTATGAATGTGGGCCCAGGAACTACCACTTCT...AGCATCAGGGAACCGCCAGCAGCAGAGAAAAAGCCAGCTCTTCTGGGGTCTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000416537.2
3UTR-3UTR CCA 90 bp ATCTGGAAGATGGGGAAGGATCTGGAAGGGCTCACGGGCTGCATGACTGTTTGCAGAACATGGCTTCAGTaGATCCAGAGATGCCTCGTC +
Preference number: 2 (lower is better)
Translates to: IWKMGKDLEGLTGCMTVCRTWLQ*IQRCLV
Trigger: GACGAGGCATCTCTGGATCCACTGAAGCCATGTTCT...GCAAACAGTCATGCAGCCCGTGAGCCCTTCCAGATCCTTCCCCATCTTCCAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416537.2
3UTR-3UTR TCA 90 bp GCTGGCGGTTCCCTGATGCTATCTTGTGCCTCACAGGAAAGCTGGTCAGAATCTCCACATTCATACCAATaGCCTCACATGTGGTGTCAG +
Preference number: 2 (lower is better)
Translates to: AGGSLMLSCASQESWSESPHSYQ*PHMWCQ
Trigger: CTGACACCACATGTGAGGTCATTGGTATGAATGTGG...AGATTCTGACCAGCTTTCCTGTGAGGCACAAGATAGCATCAGGGAACCGCCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416537.2
3UTR-3UTR GCA 90 bp TTCCCTGATGCTATCTTGTGCCTCACAGGAAAGCTGGTCAGAATCTGGAAGATGGGCTGCATGACTGTTTaGTCTGGTATCCCTATAGCC +
Preference number: 2 (lower is better)
Translates to: FPDAILCLTGKLVRIWKMGCMTV*SGIPIA
Trigger: GGCTATAGGGATACCAGAGCAAACAGTCATGCAGCC...CATCTTCCAGATTCTGACCAGCTTTCCTGTGAGGCACAAGATAGCATCAGGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416537.2
3UTR CCA 72 bp CTTGAGGAGGCCCTCAGAACCACAGGATGGCTGGGGTaGGGCTGGAGTGGCTTGCTCTCCAGTGGGAGCTTC +
Preference number: 3 (lower is better)
Translates to: LEEALRTTGWLG*GWSGLLSSGSF
Trigger: GAAGCTCCCACTGGAGAGCAAGCCACTCCAGCCCCACCCCAGCCATCCTGTGGTTCTGAGGGCCTCCTCAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416537.2
3UTR CCA 72 bp TCTGGAAGGGCTCACGGGCTGCATGACTGTTTGCTCTaGTATCCCTATAGCCTTGAGGAGGCCCTCAGAACC +
Preference number: 3 (lower is better)
Translates to: SGRAHGLHDCLL*YPYSLEEALRT
Trigger: GGTTCTGAGGGCCTCCTCAAGGCTATAGGGATACCAGAGCAAACAGTCATGCAGCCCGTGAGCCCTTCCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416537.2
3UTR CCA 72 bp GGGAGACCCCAGAAGAGCTGGCTTTTTCTCTGCTGCTaGCGGTTCCCTGATGCTATCTTGTGCCTCACAGGA +
Preference number: 3 (lower is better)
Translates to: GRPQKSWLFLCC*RFPDAILCLTG
Trigger: TCCTGTGAGGCACAAGATAGCATCAGGGAACCGCCAGCAGCAGAGAAAAAGCCAGCTCTTCTGGGGTCTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000416537.2
3UTR-3UTR CAA 90 bp GGTTCCCTGATGCTATCTTGTGCCTCACAGGAAAGCTGGTCAGAATCTGGAAGATGGGGCTGGAGTGGCTaGCTCTCCAGTGGGAGCTTC +
Preference number: 3 (lower is better)
Translates to: GSLMLSCASQESWSESGRWGWSG*LSSGSF
Trigger: GAAGCTCCCACTGGAGAGCAAGCCACTCCAGCCCCA...TCTTCCAGATTCTGACCAGCTTTCCTGTGAGGCACAAGATAGCATCAGGGAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416537.2
3UTR GCA 72 bp AAGGATCTGGAAGGGCTCACGGGCTGCATGACTGTTTaGTCTGGTATCCCTATAGCCTTGAGGAGGCCCTCA +
Preference number: 3 (lower is better)
Translates to: KDLEGLTGCMTV*SGIPIALRRPS
Trigger: TGAGGGCCTCCTCAAGGCTATAGGGATACCAGAGCAAACAGTCATGCAGCCCGTGAGCCCTTCCAGATCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416537.2
3UTR TCA 72 bp GAAGAGCTGGCTTTTTCTCTGCTGCTGGCGGTTCCCTaGTGCTATCTTGTGCCTCACAGGAAAGCTGGTCAG +
Preference number: 3 (lower is better)
Translates to: EELAFSLLLAVP*CYLVPHRKAGQ
Trigger: CTGACCAGCTTTCCTGTGAGGCACAAGATAGCATCAGGGAACCGCCAGCAGCAGAGAAAAAGCCAGCTCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416537.2
3UTR CCA 72 bp TTGCTCTCCAGTGGGAGCTTCTTTGGTAGGAGAACATaGCTTCAGTGGATCCAGAGATGCCTCGTCTTCCCC +
Preference number: 3 (lower is better)
Translates to: LLSSGSFFGRRT*LQWIQRCLVFP
Trigger: GGGGAAGACGAGGCATCTCTGGATCCACTGAAGCCATGTTCTCCTACCAAAGAAGCTCCCACTGGAGAGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416537.2
3UTR-3UTR CAA 90 bp GGTTCCCTGATGCTATCTTGTGCCTCACAGGAAAGCTGGTCAGAATCTGGAAGAGGTATCCCTATAGCCTaGAGGAGGCCCTCAGAACCA +
Preference number: 3 (lower is better)
Translates to: GSLMLSCASQESWSESGRGIPIA*RRPSEP
Trigger: TGGTTCTGAGGGCCTCCTCAAGGCTATAGGGATACC...TCTTCCAGATTCTGACCAGCTTTCCTGTGAGGCACAAGATAGCATCAGGGAACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416537.2
3UTR GCA 72 bp TTTCTCTGCTGCTGGCGGTTCCCTGATGCTATCTTGTaGCTCACAGGAAAGCTGGTCAGAATCTGGAAGATG +
Preference number: 3 (lower is better)
Translates to: FLCCWRFPDAIL*LTGKLVRIWKM
Trigger: CATCTTCCAGATTCTGACCAGCTTTCCTGTGAGGCACAAGATAGCATCAGGGAACCGCCAGCAGCAGAGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416537.2
3UTR CCA 72 bp GGTTCCCTGATGCTATCTTGTGCCTCACAGGAAAGCTaGTCAGAATCTGGAAGATGGGGAAGGATCTGGAAG +
Preference number: 3 (lower is better)
Translates to: GSLMLSCASQES*SESGRWGRIWK
Trigger: CTTCCAGATCCTTCCCCATCTTCCAGATTCTGACCAGCTTTCCTGTGAGGCACAAGATAGCATCAGGGAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416537.2
CDS-3UTR TCA 90 bp TCCACATCCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCCGCCCTGCCTCTGGCTaGTCCTGGGGACCCGAAGCT +
Preference number: 4 (lower is better)
Translates to: STSPPSPWFGFRSWHTKCRPASG*SWGPEA
Trigger: AGCTTCGGGTCCCCAGGATCAGCCAGAGGCAGGGCG...GCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGGATGTGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp GTCTCCACATCCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGCTCCGGTGCAAGAGCTaGGGGTGGGCTGAGGGCCAG +
Preference number: 4 (lower is better)
Translates to: VSTSPPSPWFGFRSWHTKLRCKS*GWAEGQ
Trigger: CTGGCCCTCAGCCCACCCCCAGCTCTTGCACCGGAG...CTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGGATGTGGAGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR TCA 90 bp GTCTCCACATCCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGGGAGGTGGAAGCAGCTaGGGATCGGGGGCCATCCCT +
Preference number: 4 (lower is better)
Translates to: VSTSPPSPWFGFRSWHTKGGGSS*GSGAIP
Trigger: AGGGATGGCCCCCGATCCTCAGCTGCTTCCACCTCC...CTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGGATGTGGAGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp GTCTCCACATCCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGGGGGTGGGGCTGGAGTaGCTTGCTCTCCAGTGGGAG +
Preference number: 4 (lower is better)
Translates to: VSTSPPSPWFGFRSWHTKGVGLE*LALQWE
Trigger: CTCCCACTGGAGAGCAAGCCACTCCAGCCCCACCCC...CTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGGATGTGGAGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp GGGAGACCCCAGAAGAGCTGGCTTTTTCTCTGCTGCTGGCGGTTCCCTGATGCTACAGGATGGCTGGGGTaGGGCTGGAGTGGCTTGCTC +
Preference number: 4 (lower is better)
Translates to: GRPQKSWLFLCCWRFPDATGWLG*GWSGLL
Trigger: GAGCAAGCCACTCCAGCCCCACCCCAGCCATCCTGT...AGCATCAGGGAACCGCCAGCAGCAGAGAAAAAGCCAGCTCTTCTGGGGTCTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000416537.2
CDS-3UTR GCA 90 bp TCCACATCCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTCTGAGCAGCTCCGGTaGAAGAGCTGGGGGTGGGCT +
Preference number: 4 (lower is better)
Translates to: STSPPSPWFGFRSWHTKCSEQLR*KSWGWA
Trigger: AGCCCACCCCCAGCTCTTGCACCGGAGCTGCTCAGA...GCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGGATGTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR GCA 90 bp CTCCACATCCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGGGAGAGTGGGGCCTCTaGCTTAACCCCTGGGCACGT +
Preference number: 4 (lower is better)
Translates to: LHIPTFPLVWLQVLAYQVGEWGL*LNPWAR
Trigger: ACGTGCCCAGGGGTTAAGGCAGAGGCCCCACTCTCC...CACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGGATGTGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp TCCACATCCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCACAGGATGGCTGGGGTaGGGCTGGAGTGGCTTGCTC +
Preference number: 4 (lower is better)
Translates to: STSPPSPWFGFRSWHTKCTGWLG*GWSGLL
Trigger: GAGCAAGCCACTCCAGCCCCACCCCAGCCATCCTGT...GCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGGATGTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp CTCCACATCCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCCACTGCCAGAGGGCTaGGGCCTTGGGGAACTTCTC +
Preference number: 4 (lower is better)
Translates to: LHIPTFPLVWLQVLAYQVPLPEG*GLGELL
Trigger: GAGAAGTTCCCCAAGGCCCCAGCCCTCTGGCAGTGG...CACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGGATGTGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp CTCCACATCCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGGCTAGGGTGGGAGGCTaGGGTACTGGGTGTAGGGGA +
Preference number: 4 (lower is better)
Translates to: LHIPTFPLVWLQVLAYQVARVGG*GTGCRG
Trigger: TCCCCTACACCCAGTACCCCAGCCTCCCACCCTAGC...CACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGGATGTGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp GTCTCCACATCCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGGCTAGGGTGGGAGGCTaGGGTACTGGGTGTAGGGGA +
Preference number: 4 (lower is better)
Translates to: VSTSPPSPWFGFRSWHTKARVGG*GTGCRG
Trigger: TCCCCTACACCCAGTACCCCAGCCTCCCACCCTAGC...CTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGGATGTGGAGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR TCA 90 bp GTCTCCACATCCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGCCAGAGCACCAGGGATaGAGCTGTCGCAACCTCCCA +
Preference number: 4 (lower is better)
Translates to: VSTSPPSPWFGFRSWHTKPEHQG*SCRNLP
Trigger: TGGGAGGTTGCGACAGCTTCATCCCTGGTGCTCTGG...CTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGGATGTGGAGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312292.6
ENST00000421362.6
CDS-3UTR TCA 90 bp CTCCACATCCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCCAGAGCACCAGGGATaGAGCTGTCGCAACCTCCCA +
Preference number: 4 (lower is better)
Translates to: LHIPTFPLVWLQVLAYQVPEHQG*SCRNLP
Trigger: TGGGAGGTTGCGACAGCTTCATCCCTGGTGCTCTGG...CACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGGATGTGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312292.6
ENST00000421362.6
CDS-3UTR TCA 90 bp TTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCCCGCCCTGCCTCTGGCTaGTCCTGGGGACCCGAAGCT +
Preference number: 4 (lower is better)
Translates to: FPLVWLQVLAYQVLVLPARPASG*SWGPEA
Trigger: AGCTTCGGGTCCCCAGGATCAGCCAGAGGCAGGGCG...GGCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR GCA 90 bp GTCTCCACATCCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTGCCGCAGTGTCTaGAGGCTAGGGCATGGGTCA +
Preference number: 4 (lower is better)
Translates to: VSTSPPSPWFGFRSWHTKCCRSV*RLGHGS
Trigger: TGACCCATGCCCTAGCCTGCAGACACTGCGGCAGCA...CTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGGATGTGGAGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000312292.6
CDS-3UTR GCA 90 bp TCCACATCCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCGGGGCTGGAGTGGCTTaGTCTCCAGTGGGAGCTTCT +
Preference number: 4 (lower is better)
Translates to: STSPPSPWFGFRSWHTKCGAGVA*SPVGAS
Trigger: AGAAGCTCCCACTGGAGAGCAAGCCACTCCAGCCCC...GCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGGATGTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR GCA 90 bp CTCCACATCCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGGGGGCTGGAGTGGCTTaGTCTCCAGTGGGAGCTTCT +
Preference number: 4 (lower is better)
Translates to: LHIPTFPLVWLQVLAYQVGAGVA*SPVGAS
Trigger: AGAAGCTCCCACTGGAGAGCAAGCCACTCCAGCCCC...CACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGGATGTGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR GCA 90 bp CTCCACATCCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTGGAGGCAGGGCTCTaGCGCAGTTTCTTCAGCCTG +
Preference number: 4 (lower is better)
Translates to: LHIPTFPLVWLQVLAYQVLEAGL*RSFFSL
Trigger: CAGGCTGAAGAAACTGCGGCAGAGCCCTGCCTCCAG...CACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGGATGTGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR GCA 90 bp GTCTCCACATCCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGACTTGCTCTTCGCCCTaGCTCTGGCTGATCCTGGGG +
Preference number: 4 (lower is better)
Translates to: VSTSPPSPWFGFRSWHTKTCSSP*LWLILG
Trigger: CCCCAGGATCAGCCAGAGGCAGGGCGAAGAGCAAGT...CTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGGATGTGGAGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR GCA 90 bp GTCTCCACATCCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGGGCCCAAGGACAGTaGTTACAGTGGCGAGGGGTC +
Preference number: 4 (lower is better)
Translates to: VSTSPPSPWFGFRSWHTKWAQGQ*LQWRGV
Trigger: GACCCCTCGCCACTGTAAGCACTGTCCTTGGGCCCA...CTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGGATGTGGAGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR GCA 90 bp TCCACATCCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTGGGCCCAAGGACAGTaGTTACAGTGGCGAGGGGTC +
Preference number: 4 (lower is better)
Translates to: STSPPSPWFGFRSWHTKCWAQGQ*LQWRGV
Trigger: GACCCCTCGCCACTGTAAGCACTGTCCTTGGGCCCA...GCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGGATGTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp CCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTGGGGTGGGGCTGGAGTaGCTTGCTCTCCAGTGGGAG +
Preference number: 4 (lower is better)
Translates to: PHLPPGLASGLGIPSASIGVGLE*LALQWE
Trigger: CTCCCACTGGAGAGCAAGCCACTCCAGCCCCACCCC...AATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp TGGCGGTTCCCTGATGCTATCTTGTGCCTCACAGGAAAGCTGGTCAGAATCTGGGGGGTGGGGCTGGAGTaGCTTGCTCTCCAGTGGGAG +
Preference number: 4 (lower is better)
Translates to: WRFPDAILCLTGKLVRIWGVGLE*LALQWE
Trigger: CTCCCACTGGAGAGCAAGCCACTCCAGCCCCACCCC...CCAGATTCTGACCAGCTTTCCTGTGAGGCACAAGATAGCATCAGGGAACCGCCA
59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000416537.2
CDS-3UTR CCA 90 bp TTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCCCTCCGGTGCAAGAGCTaGGGGTGGGCTGAGGGCCAG +
Preference number: 4 (lower is better)
Translates to: FPLVWLQVLAYQVLVLPALRCKS*GWAEGQ
Trigger: CTGGCCCTCAGCCCACCCCCAGCTCTTGCACCGGAG...GGCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp CTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCCTCCGGTGCAAGAGCTaGGGGTGGGCTGAGGGCCAG +
Preference number: 4 (lower is better)
Translates to: LPPGLASGLGIPSASITSLRCKS*GWAEGQ
Trigger: CTGGCCCTCAGCCCACCCCCAGCTCTTGCACCGGAG...GCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp GTCTCCACATCCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGAGACTCCCAGAGGGCTaGCTCCATGCAGGTCTTGGG +
Preference number: 4 (lower is better)
Translates to: VSTSPPSPWFGFRSWHTKRLPEG*LHAGLG
Trigger: CCCAAGACCTGCATGGAGCCAGCCCTCTGGGAGTCT...CTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGGATGTGGAGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp GTCTCCACATCCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGCAGCTTCAGCTAGGGTaGGAGGCTGGGGTACTGGGT +
Preference number: 4 (lower is better)
Translates to: VSTSPPSPWFGFRSWHTKQLQLG*EAGVLG
Trigger: ACCCAGTACCCCAGCCTCCCACCCTAGCTGAAGCTG...CTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGGATGTGGAGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp TCCACATCCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCCAGCTTCAGCTAGGGTaGGAGGCTGGGGTACTGGGT +
Preference number: 4 (lower is better)
Translates to: STSPPSPWFGFRSWHTKCQLQLG*EAGVLG
Trigger: ACCCAGTACCCCAGCCTCCCACCCTAGCTGAAGCTG...GCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGGATGTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp TCCACATCCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCCCATCTCTGGGAGAGTaGGGCCTCTGCCTTAACCCC +
Preference number: 4 (lower is better)
Translates to: STSPPSPWFGFRSWHTKCPSLGE*GLCLNP
Trigger: GGGGTTAAGGCAGAGGCCCCACTCTCCCAGAGATGG...GCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGGATGTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp TTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCCTTGGGCCAGGGGCTCTaGAGGCAGGGCTCTGCCGCA +
Preference number: 4 (lower is better)
Translates to: FPLVWLQVLAYQVLVLPALGQGL*RQGSAA
Trigger: TGCGGCAGAGCCCTGCCTCCAGAGCCCCTGGCCCAA...GGCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp CTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCTTGGGCCAGGGGCTCTaGAGGCAGGGCTCTGCCGCA +
Preference number: 4 (lower is better)
Translates to: LPPGLASGLGIPSASITSLGQGL*RQGSAA
Trigger: TGCGGCAGAGCCCTGCCTCCAGAGCCCCTGGCCCAA...GCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp CTCCACATCCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGGGGGACCCGAAGCTTTaGGGAGAAGCAGCTGGGGAA +
Preference number: 4 (lower is better)
Translates to: LHIPTFPLVWLQVLAYQVGDPKL*GEAAGE
Trigger: TTCCCCAGCTGCTTCTCCCCAAAGCTTCGGGTCCCC...CACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGGATGTGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR TCA 90 bp CTCCACATCCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGGGCTCACGGGCTGCATaGCTGTTTGCTCTGGTATCC +
Preference number: 4 (lower is better)
Translates to: LHIPTFPLVWLQVLAYQVGSRAA*LFALVS
Trigger: GGATACCAGAGCAAACAGTCATGCAGCCCGTGAGCC...CACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGGATGTGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR TCA 90 bp CTCCACATCCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTGCTGGCGGTTCCCTaGTGCTATCTTGTGCCTCAC +
Preference number: 4 (lower is better)
Translates to: LHIPTFPLVWLQVLAYQVLLAVP*CYLVPH
Trigger: GTGAGGCACAAGATAGCATCAGGGAACCGCCAGCAG...CACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGGATGTGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR TCA 90 bp GTCTCCACATCCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGCTGCTGGCGGTTCCCTaGTGCTATCTTGTGCCTCAC +
Preference number: 4 (lower is better)
Translates to: VSTSPPSPWFGFRSWHTKLLAVP*CYLVPH
Trigger: GTGAGGCACAAGATAGCATCAGGGAACCGCCAGCAG...CTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGGATGTGGAGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR TCA 90 bp TCCACATCCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCGCAAGGGACTGGCATTaGAGACTCAGAGGCCTGAGG +
Preference number: 4 (lower is better)
Translates to: STSPPSPWFGFRSWHTKCARDWH*RLRGLR
Trigger: CCTCAGGCCTCTGAGTCTTCAATGCCAGTCCCTTGC...GCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGGATGTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR GCA 90 bp GTCTCCACATCCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGGGGTGGTTGGAGGTGTaGTATGAACAGGGTCTGGGG +
Preference number: 4 (lower is better)
Translates to: VSTSPPSPWFGFRSWHTKGWLEV*YEQGLG
Trigger: CCCCAGACCCTGTTCATAGCACACCTCCAACCACCC...CTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGGATGTGGAGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR GCA 90 bp TCCACATCCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCGGTCAGGATGTCACTTaGTCTTCGCCCTGCCTCTGG +
Preference number: 4 (lower is better)
Translates to: STSPPSPWFGFRSWHTKCGQDVT*SSPCLW
Trigger: CCAGAGGCAGGGCGAAGAGCAAGTGACATCCTGACC...GCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGGATGTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp TTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCCGGGGTGGGGCTGGAGTaGCTTGCTCTCCAGTGGGAG +
Preference number: 4 (lower is better)
Translates to: FPLVWLQVLAYQVLVLPAGVGLE*LALQWE
Trigger: CTCCCACTGGAGAGCAAGCCACTCCAGCCCCACCCC...GGCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp GTCTCCACATCCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGAGATGGGGAAGGATCTaGAAGGGCTCACGGGCTGCA +
Preference number: 4 (lower is better)
Translates to: VSTSPPSPWFGFRSWHTKRWGRI*KGSRAA
Trigger: TGCAGCCCGTGAGCCCTTCCAGATCCTTCCCCATCT...CTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGGATGTGGAGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp CTCCACATCCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGTTCCAGGGGACTGTGTaGGTGCCTCAGCGCCAGATA +
Preference number: 4 (lower is better)
Translates to: LHIPTFPLVWLQVLAYQVFQGTV*VPQRQI
Trigger: TATCTGGCGCTGAGGCACCCACACAGTCCCCTGGAA...CACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGGATGTGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp CTCCACATCCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGGCTGAGGGCCAGAGATaGAGACCTAGAAGCCGAGGA +
Preference number: 4 (lower is better)
Translates to: LHIPTFPLVWLQVLAYQVAEGQR*RPRSRG
Trigger: TCCTCGGCTTCTAGGTCTCCATCTCTGGCCCTCAGC...CACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGGATGTGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp CCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTTGCAAGAGCTGGGGGTaGGCTGAGGGCCAGAGATGG +
Preference number: 4 (lower is better)
Translates to: PHLPPGLASGLGIPSASICKSWG*AEGQRW
Trigger: CCATCTCTGGCCCTCAGCCCACCCCCAGCTCTTGCA...AATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp CCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTCCACTGCCAGAGGGCTaGGGCCTTGGGGAACTTCTC +
Preference number: 4 (lower is better)
Translates to: PHLPPGLASGLGIPSASIPLPEG*GLGELL
Trigger: GAGAAGTTCCCCAAGGCCCCAGCCCTCTGGCAGTGG...AATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp CCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCCTTTTTGGGCCAGGGGCTCTaGAGGCAGGGCTCTGCCGCA +
Preference number: 4 (lower is better)
Translates to: PLVWLQVLAYQVLVLPAFLGQGL*RQGSAA
Trigger: TGCGGCAGAGCCCTGCCTCCAGAGCCCCTGGCCCAA...AAAGGCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp TCCACATCCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCCCTGCCAGACTCCTGTaGCTGAAGCTGGGAAGAGGA +
Preference number: 4 (lower is better)
Translates to: STSPPSPWFGFRSWHTKCPARLL*LKLGRG
Trigger: TCCTCTTCCCAGCTTCAGCCACAGGAGTCTGGCAGG...GCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGGATGTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp CTCCACATCCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGTGTACACATGGCCCTTaGGATGGGACCTGGCTCACC +
Preference number: 4 (lower is better)
Translates to: LHIPTFPLVWLQVLAYQVCTHGP*DGTWLT
Trigger: GGTGAGCCAGGTCCCATCCCAAGGGCCATGTGTACA...CACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGGATGTGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp GTCTCCACATCCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGTACACATGGCCCTTaGGATGGGACCTGGCTCACC +
Preference number: 4 (lower is better)
Translates to: VSTSPPSPWFGFRSWHTKCTHGP*DGTWLT
Trigger: GGTGAGCCAGGTCCCATCCCAAGGGCCATGTGTACA...CTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGGATGTGGAGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR TCA 90 bp GTCTCCACATCCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGATTTTCTCCCCTCTCTaGGACCCTTGTTCCGCCCTG +
Preference number: 4 (lower is better)
Translates to: VSTSPPSPWFGFRSWHTKIFSPL*DPCSAL
Trigger: CAGGGCGGAACAAGGGTCTCAGAGAGGGGAGAAAAT...CTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGGATGTGGAGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR TCA 90 bp TCCACATCCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCCAGAACCTTAGAGTTTaGGGGTTCTCCTGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: STSPPSPWFGFRSWHTKCQNLRV*GFSWAW
Trigger: CCAGGCCCAGGAGAACCCTCAAACTCTAAGGTTCTG...GCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGGATGTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR TCA 90 bp GTCTCCACATCCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGCAGAACCTTAGAGTTTaGGGGTTCTCCTGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: VSTSPPSPWFGFRSWHTKQNLRV*GFSWAW
Trigger: CCAGGCCCAGGAGAACCCTCAAACTCTAAGGTTCTG...CTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGGATGTGGAGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR TCA 90 bp GTCTCCACATCCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGGGTGGTTCTTCCCTGTaGCTGTGGATAACCCCAACC +
Preference number: 4 (lower is better)
Translates to: VSTSPPSPWFGFRSWHTKGGSSL*LWITPT
Trigger: GGTTGGGGTTATCCACAGTCACAGGGAAGAACCACC...CTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGGATGTGGAGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR TCA 90 bp TCCACATCCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCGGTGGTTCTTCCCTGTaGCTGTGGATAACCCCAACC +
Preference number: 4 (lower is better)
Translates to: STSPPSPWFGFRSWHTKCGGSSL*LWITPT
Trigger: GGTTGGGGTTATCCACAGTCACAGGGAAGAACCACC...GCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGGATGTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR TCA 90 bp CCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCCTTTTCCGCCCTGCCTCTGGCTaGTCCTGGGGACCCGAAGCT +
Preference number: 4 (lower is better)
Translates to: PGLASGLGIPSASITSLFRPASG*SWGPEA
Trigger: AGCTTCGGGTCCCCAGGATCAGCCAGAGGCAGGGCG...GAAAAGGCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR GCA 90 bp GGGAGCTTCTTTGGTAGGAGAACATGGCTTCAGTGGATCCAGAGATGCCTCGTCGGGGCTGGAGTGGCTTaGTCTCCAGTGGGAGCTTCT +
Preference number: 4 (lower is better)
Translates to: GSFFGRRTWLQWIQRCLVGAGVA*SPVGAS
Trigger: AGAAGCTCCCACTGGAGAGCAAGCCACTCCAGCCCC...GACGAGGCATCTCTGGATCCACTGAAGCCATGTTCTCCTACCAAAGAAGCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416537.2
CDS-3UTR GCA 90 bp TCTGGTATCCCTATAGCCTTGAGGAGGCCCTCAGAACCACAGGATGGCTGGGGTGAAGGGCTCACGGGCTaGATGACTGTTTGCTCTGGT +
Preference number: 4 (lower is better)
Translates to: SGIPIALRRPSEPQDGWGEGLTG*MTVCSG
Trigger: ACCAGAGCAAACAGTCATGCAGCCCGTGAGCCCTTC...ACCCCAGCCATCCTGTGGTTCTGAGGGCCTCCTCAAGGCTATAGGGATACCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416537.2
CDS-3UTR GCA 90 bp GTCTCCACATCCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGGAAGGGCTCACGGGCTaGATGACTGTTTGCTCTGGT +
Preference number: 4 (lower is better)
Translates to: VSTSPPSPWFGFRSWHTKEGLTG*MTVCSG
Trigger: ACCAGAGCAAACAGTCATGCAGCCCGTGAGCCCTTC...CTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGGATGTGGAGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR GCA 90 bp CTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCTCTGAGCAGCTCCGGTaGAAGAGCTGGGGGTGGGCT +
Preference number: 4 (lower is better)
Translates to: LPPGLASGLGIPSASITSSEQLR*KSWGWA
Trigger: AGCCCACCCCCAGCTCTTGCACCGGAGCTGCTCAGA...GCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp CTCCACATCCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGAGATTTCCTGGACTCTaGAAGCAGCTGCTGCCGCAG +
Preference number: 4 (lower is better)
Translates to: LHIPTFPLVWLQVLAYQVRFPGL*KQLLPQ
Trigger: CTGCGGCAGCAGCTGCTTCCAGAGTCCAGGAAATCT...CACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGGATGTGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000312292.6
CDS-3UTR CCA 90 bp CTCCACATCCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTGAGCTCAGGAAGATaGCCTCCAAGGACTCGCTGT +
Preference number: 4 (lower is better)
Translates to: LHIPTFPLVWLQVLAYQVLSSGR*PPRTRC
Trigger: ACAGCGAGTCCTTGGAGGCCATCTTCCTGAGCTCAG...CACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGGATGTGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp CTCCACATCCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGGGTTCCAGAGAGCTCTaGGTTGAGGTCCAAGACTGG +
Preference number: 4 (lower is better)
Translates to: LHIPTFPLVWLQVLAYQVGSREL*VEVQDW
Trigger: CCAGTCTTGGACCTCAACCCAGAGCTCTCTGGAACC...CACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGGATGTGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp GTCTCCACATCCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTCAGACAGGACTCCCTaGGGGCCCATTACTAGAGAC +
Preference number: 4 (lower is better)
Translates to: VSTSPPSPWFGFRSWHTKSDRTP*GPITRD
Trigger: GTCTCTAGTAATGGGCCCCCAGGGAGTCCTGTCTGA...CTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGGATGTGGAGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp CTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCTGCAAGAGCTGGGGGTaGGCTGAGGGCCAGAGATGG +
Preference number: 4 (lower is better)
Translates to: LPPGLASGLGIPSASITSCKSWG*AEGQRW
Trigger: CCATCTCTGGCCCTCAGCCCACCCCCAGCTCTTGCA...GCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp GTCTCCACATCCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGAGAGGGCTGGGGCCTTaGGGAACTTCTCTTTGTTGC +
Preference number: 4 (lower is better)
Translates to: VSTSPPSPWFGFRSWHTKRGLGP*GTSLCC
Trigger: GCAACAAAGAGAAGTTCCCCAAGGCCCCAGCCCTCT...CTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGGATGTGGAGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp CTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCCCACTGCCAGAGGGCTaGGGCCTTGGGGAACTTCTC +
Preference number: 4 (lower is better)
Translates to: LPPGLASGLGIPSASITSPLPEG*GLGELL
Trigger: GAGAAGTTCCCCAAGGCCCCAGCCCTCTGGCAGTGG...GCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp CTCCACATCCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGGCATGGATCCCAGGATaGGTGAGCAACTCTGGGACA +
Preference number: 4 (lower is better)
Translates to: LHIPTFPLVWLQVLAYQVAWIPG*VSNSGT
Trigger: TGTCCCAGAGTTGCTCACCCATCCTGGGATCCATGC...CACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGGATGTGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp TCCACATCCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCACATGGCCCTTGGGATaGGACCTGGCTCACCATCTT +
Preference number: 4 (lower is better)
Translates to: STSPPSPWFGFRSWHTKCTWPLG*DLAHHL
Trigger: AAGATGGTGAGCCAGGTCCCATCCCAAGGGCCATGT...GCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGGATGTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp CTCCACATCCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTCCATGTGTACACATaGCCCTTGGGATGGGACCTG +
Preference number: 4 (lower is better)
Translates to: LHIPTFPLVWLQVLAYQVLHVYT*PLGWDL
Trigger: CAGGTCCCATCCCAAGGGCCATGTGTACACATGGAG...CACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGGATGTGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp CTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCTCTTCGCCCTGCCTCTaGCTGATCCTGGGGACCCGA +
Preference number: 4 (lower is better)
Translates to: LPPGLASGLGIPSASITSSSPCL*LILGTR
Trigger: TCGGGTCCCCAGGATCAGCCAGAGGCAGGGCGAAGA...GCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp TTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCCTCTTCGCCCTGCCTCTaGCTGATCCTGGGGACCCGA +
Preference number: 4 (lower is better)
Translates to: FPLVWLQVLAYQVLVLPASSPCL*LILGTR
Trigger: TCGGGTCCCCAGGATCAGCCAGAGGCAGGGCGAAGA...GGCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
3UTR CAA 72 bp GGCTGCATGACTGTTTGCTCTGGTATCCCTATAGCCTaGAGGAGGCCCTCAGAACCACAGGATGGCTGGGGT +
Preference number: 4 (lower is better)
Translates to: GCMTVCSGIPIA*RRPSEPQDGWG
Trigger: ACCCCAGCCATCCTGTGGTTCTGAGGGCCTCCTCAAGGCTATAGGGATACCAGAGCAAACAGTCATGCAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416537.2
3UTR CAA 72 bp GAAGGATCTGGAAGGGCTCACGGGCTGCATGACTGTTaGCTCTGGTATCCCTATAGCCTTGAGGAGGCCCTC +
Preference number: 4 (lower is better)
Translates to: EGSGRAHGLHDC*LWYPYSLEEAL
Trigger: GAGGGCCTCCTCAAGGCTATAGGGATACCAGAGCAAACAGTCATGCAGCCCGTGAGCCCTTCCAGATCCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416537.2
CDS-3UTR TCA 90 bp CTCCACATCCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGTTCTGCTTACACAGGTaGTCAAGGAAGGCCACACGG +
Preference number: 4 (lower is better)
Translates to: LHIPTFPLVWLQVLAYQVFCLHR*SRKATR
Trigger: CCGTGTGGCCTTCCTTGATCACCTGTGTAAGCAGAA...CACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGGATGTGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR TCA 90 bp CCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTGGCTCACGGGCTGCATaGCTGTTTGCTCTGGTATCC +
Preference number: 4 (lower is better)
Translates to: PHLPPGLASGLGIPSASIGSRAA*LFALVS
Trigger: GGATACCAGAGCAAACAGTCATGCAGCCCGTGAGCC...AATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR TCA 90 bp TGGCGGTTCCCTGATGCTATCTTGTGCCTCACAGGAAAGCTGGTCAGAATCTGGGGCTCACGGGCTGCATaGCTGTTTGCTCTGGTATCC +
Preference number: 4 (lower is better)
Translates to: WRFPDAILCLTGKLVRIWGSRAA*LFALVS
Trigger: GGATACCAGAGCAAACAGTCATGCAGCCCGTGAGCC...CCAGATTCTGACCAGCTTTCCTGTGAGGCACAAGATAGCATCAGGGAACCGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416537.2
CDS-3UTR TCA 90 bp CTCCACATCCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGGTTGGAGGTGTGCTATaGACAGGGTCTGGGGAATCA +
Preference number: 4 (lower is better)
Translates to: LHIPTFPLVWLQVLAYQVVGGVL*TGSGES
Trigger: TGATTCCCCAGACCCTGTTCATAGCACACCTCCAAC...CACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGGATGTGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR TCA 90 bp TCCACATCCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCGTTGGAGGTGTGCTATaGACAGGGTCTGGGGAATCA +
Preference number: 4 (lower is better)
Translates to: STSPPSPWFGFRSWHTKCVGGVL*TGSGES
Trigger: TGATTCCCCAGACCCTGTTCATAGCACACCTCCAAC...GCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGGATGTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR TCA 90 bp CTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCGGATCCCAGGATGGGTaGGCAACTCTGGGACAGTCC +
Preference number: 4 (lower is better)
Translates to: LPPGLASGLGIPSASITSGSQDG*ATLGQS
Trigger: GGACTGTCCCAGAGTTGCTCACCCATCCTGGGATCC...GCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR TCA 90 bp TTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCCGGATCCCAGGATGGGTaGGCAACTCTGGGACAGTCC +
Preference number: 4 (lower is better)
Translates to: FPLVWLQVLAYQVLVLPAGSQDG*ATLGQS
Trigger: GGACTGTCCCAGAGTTGCTCACCCATCCTGGGATCC...GGCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR GCA 90 bp CCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTTCTGGAAGCAGCTGCTaGCGCAGTGTCTGCAGGCTA +
Preference number: 4 (lower is better)
Translates to: PHLPPGLASGLGIPSASISGSSC*RSVCRL
Trigger: TAGCCTGCAGACACTGCGGCAGCAGCTGCTTCCAGA...AATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000312292.6
CDS-3UTR GCA 90 bp CTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCGACTCTGGAAGCAGCTaGTGCCGCAGTGTCTGCAGG +
Preference number: 4 (lower is better)
Translates to: LPPGLASGLGIPSASITSDSGSS*CRSVCR
Trigger: CCTGCAGACACTGCGGCAGCAGCTGCTTCCAGAGTC...GCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000312292.6
CDS-3UTR GCA 90 bp TCCACATCCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCAGGAAGGCCACACGGTaGAGAAGTGGTAGTTCCTTG +
Preference number: 4 (lower is better)
Translates to: STSPPSPWFGFRSWHTKCRKATR*RSGSSL
Trigger: CAAGGAACTACCACTTCTGCACCGTGTGGCCTTCCT...GCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGGATGTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312292.6
ENST00000421362.6
CDS-3UTR GCA 90 bp TTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCCGGGGCTGGAGTGGCTTaGTCTCCAGTGGGAGCTTCT +
Preference number: 4 (lower is better)
Translates to: FPLVWLQVLAYQVLVLPAGAGVA*SPVGAS
Trigger: AGAAGCTCCCACTGGAGAGCAAGCCACTCCAGCCCC...GGCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR GCA 90 bp GGGTGGGGCTGGAGTGGCTTGCTCTCCAGTGGGAGCTTCTTTGGTAGGAGAACAGGCTGCATGACTGTTTaGTCTGGTATCCCTATAGCC +
Preference number: 4 (lower is better)
Translates to: GWGWSGLLSSGSFFGRRTGCMTV*SGIPIA
Trigger: GGCTATAGGGATACCAGAGCAAACAGTCATGCAGCC...TGTTCTCCTACCAAAGAAGCTCCCACTGGAGAGCAAGCCACTCCAGCCCCACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416537.2
CDS-3UTR GCA 90 bp GTCTCCACATCCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGCCATGGTGTCTCAGATaGTGGTGGGACACATTCAGG +
Preference number: 4 (lower is better)
Translates to: VSTSPPSPWFGFRSWHTKPWCLR*WWDTFR
Trigger: CCTGAATGTGTCCCACCAGCATCTGAGACACCATGG...CTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGGATGTGGAGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR GCA 90 bp CTCCACATCCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCCATGGTGTCTCAGATaGTGGTGGGACACATTCAGG +
Preference number: 4 (lower is better)
Translates to: LHIPTFPLVWLQVLAYQVPWCLR*WWDTFR
Trigger: CCTGAATGTGTCCCACCAGCATCTGAGACACCATGG...CACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGGATGTGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR GCA 90 bp GTCTCCACATCCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGAGAGGGCTGGCTCCATaGAGGTCTTGGGGTAAGTTA +
Preference number: 4 (lower is better)
Translates to: VSTSPPSPWFGFRSWHTKRGLAP*RSWGKL
Trigger: TAACTTACCCCAAGACCTGCATGGAGCCAGCCCTCT...CTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGGATGTGGAGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR GCA 90 bp CTCCACATCCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGAGAGGGCTGGCTCCATaGAGGTCTTGGGGTAAGTTA +
Preference number: 4 (lower is better)
Translates to: LHIPTFPLVWLQVLAYQVRGLAP*RSWGKL
Trigger: TAACTTACCCCAAGACCTGCATGGAGCCAGCCCTCT...CACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGGATGTGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR GCA 90 bp CCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCCTTGTTCCGCCCTaGCAGACTCCTGTGGCTGAA +
Preference number: 4 (lower is better)
Translates to: PHLPPGLASGLGIPSASITLVPP*QTPVAE
Trigger: TTCAGCCACAGGAGTCTGGCAGGGCGGAACAAGGGT...AATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR GCA 90 bp CCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTGGTCAGGATGTCACTTaGTCTTCGCCCTGCCTCTGG +
Preference number: 4 (lower is better)
Translates to: PHLPPGLASGLGIPSASIGQDVT*SSPCLW
Trigger: CCAGAGGCAGGGCGAAGAGCAAGTGACATCCTGACC...AATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR GCA 90 bp CTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCTGGGCCCAAGGACAGTaGTTACAGTGGCGAGGGGTC +
Preference number: 4 (lower is better)
Translates to: LPPGLASGLGIPSASITSWAQGQ*LQWRGV
Trigger: GACCCCTCGCCACTGTAAGCACTGTCCTTGGGCCCA...GCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp CCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTAGGGCATGGGTCAGTTaGCCCCAGAGAAGCCCCATA +
Preference number: 4 (lower is better)
Translates to: PHLPPGLASGLGIPSASIRAWVS*PQRSPI
Trigger: TATGGGGCTTCTCTGGGGCCAACTGACCCATGCCCT...AATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000312292.6
CDS-3UTR CCA 90 bp CCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCCTTTACAGGATGGCTGGGGTaGGGCTGGAGTGGCTTGCTC +
Preference number: 4 (lower is better)
Translates to: PLVWLQVLAYQVLVLPAFTGWLG*GWSGLL
Trigger: GAGCAAGCCACTCCAGCCCCACCCCAGCCATCCTGT...AAAGGCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp CTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCCTCAGAACCACAGGATaGCTGGGGTGGGGCTGGAGT +
Preference number: 4 (lower is better)
Translates to: LPPGLASGLGIPSASITSLRTTG*LGWGWS
Trigger: ACTCCAGCCCCACCCCAGCCATCCTGTGGTTCTGAG...GCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp ATCTGGAAGATGGGGAAGGATCTGGAAGGGCTCACGGGCTGCATGACTGTTTGCCTGAGCTCAGGAAGATaGCCTCCAAGGACTCGCTGT +
Preference number: 4 (lower is better)
Translates to: IWKMGKDLEGLTGCMTVCLSSGR*PPRTRC
Trigger: ACAGCGAGTCCTTGGAGGCCATCTTCCTGAGCTCAG...GCAAACAGTCATGCAGCCCGTGAGCCCTTCCAGATCCTTCCCCATCTTCCAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416537.2
CDS-3UTR CCA 90 bp TCCACATCCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCGATAAAACTCCCTTGTaGTCCACAGGGAAGGGCCTC +
Preference number: 4 (lower is better)
Translates to: STSPPSPWFGFRSWHTKCDKTPL*STGKGL
Trigger: GAGGCCCTTCCCTGTGGACCACAAGGGAGTTTTATC...GCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGGATGTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp GTCTCCACATCCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGAGGGAACTCTCTCTCTaGAGTTCTGGCAGGGAGTCT +
Preference number: 4 (lower is better)
Translates to: VSTSPPSPWFGFRSWHTKRELSL*SSGRES
Trigger: AGACTCCCTGCCAGAACTCCAGAGAGAGAGTTCCCT...CTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGGATGTGGAGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp GTCTCCACATCCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGTCTCAGATGCTGGTaGGACACATTCAGGGCTGGT +
Preference number: 4 (lower is better)
Translates to: VSTSPPSPWFGFRSWHTKCLRCW*DTFRAG
Trigger: ACCAGCCCTGAATGTGTCCCACCAGCATCTGAGACA...CTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGGATGTGGAGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp TCCACATCCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTGGTGTCTCAGATGCTaGTGGGACACATTCAGGGCT +
Preference number: 4 (lower is better)
Translates to: STSPPSPWFGFRSWHTKCWCLRC*WDTFRA
Trigger: AGCCCTGAATGTGTCCCACCAGCATCTGAGACACCA...GCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGGATGTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp TCCACATCCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCGCTATGAACAGGGTCTaGGGAATCAGATGCCCAGAG +
Preference number: 4 (lower is better)
Translates to: STSPPSPWFGFRSWHTKCAMNRV*GIRCPE
Trigger: CTCTGGGCATCTGATTCCCCAGACCCTGTTCATAGC...GCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGGATGTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp CCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCCTTTTGCAAGAGCTGGGGGTaGGCTGAGGGCCAGAGATGG +
Preference number: 4 (lower is better)
Translates to: PLVWLQVLAYQVLVLPAFCKSWG*AEGQRW
Trigger: CCATCTCTGGCCCTCAGCCCACCCCCAGCTCTTGCA...AAAGGCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp TCCACATCCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCGCTCCATGCAGGTCTTaGGGTAAGTTACAAGCTGGG +
Preference number: 4 (lower is better)
Translates to: STSPPSPWFGFRSWHTKCAPCRS*GKLQAG
Trigger: CCCAGCTTGTAACTTACCCCAAGACCTGCATGGAGC...GCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGGATGTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp TTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCCAGACTCCCAGAGGGCTaGCTCCATGCAGGTCTTGGG +
Preference number: 4 (lower is better)
Translates to: FPLVWLQVLAYQVLVLPARLPEG*LHAGLG
Trigger: CCCAAGACCTGCATGGAGCCAGCCCTCTGGGAGTCT...GGCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp CTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCAGACTCCCAGAGGGCTaGCTCCATGCAGGTCTTGGG +
Preference number: 4 (lower is better)
Translates to: LPPGLASGLGIPSASITSRLPEG*LHAGLG
Trigger: CCCAAGACCTGCATGGAGCCAGCCCTCTGGGAGTCT...GCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp TTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCCCAGCTTCAGCTAGGGTaGGAGGCTGGGGTACTGGGT +
Preference number: 4 (lower is better)
Translates to: FPLVWLQVLAYQVLVLPAQLQLG*EAGVLG
Trigger: ACCCAGTACCCCAGCCTCCCACCCTAGCTGAAGCTG...GGCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp CTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCCCATCTCTGGGAGAGTaGGGCCTCTGCCTTAACCCC +
Preference number: 4 (lower is better)
Translates to: LPPGLASGLGIPSASITSPSLGE*GLCLNP
Trigger: GGGGTTAAGGCAGAGGCCCCACTCTCCCAGAGATGG...GCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp GTCTCCACATCCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGATGGGTGAGCAACTCTaGGACAGTCCATCTCTGGGA +
Preference number: 4 (lower is better)
Translates to: VSTSPPSPWFGFRSWHTKMGEQL*DSPSLG
Trigger: TCCCAGAGATGGACTGTCCCAGAGTTGCTCACCCAT...CTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGGATGTGGAGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp GTCTCCACATCCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGATAAATCTGCTGTGGTaGGCAGGAAGGGAGTCCCCA +
Preference number: 4 (lower is better)
Translates to: VSTSPPSPWFGFRSWHTKINLLW*AGRESP
Trigger: TGGGGACTCCCTTCCTGCCCACCACAGCAGATTTAT...CTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGGATGTGGAGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp GTCTCCACATCCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGAGTGGGGGCATGGATTaGGGGGATAAATCTGCTGTG +
Preference number: 4 (lower is better)
Translates to: VSTSPPSPWFGFRSWHTKSGGMD*GDKSAV
Trigger: CACAGCAGATTTATCCCCCCAATCCATGCCCCCACT...CTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGGATGTGGAGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp CCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTCCTTGGGATGGGACCTaGCTCACCATCTTCCCCTTC +
Preference number: 4 (lower is better)
Translates to: PHLPPGLASGLGIPSASIPWDGT*LTIFPF
Trigger: GAAGGGGAAGATGGTGAGCCAGGTCCCATCCCAAGG...AATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp CCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTTGTACACATGGCCCTTaGGATGGGACCTGGCTCACC +
Preference number: 4 (lower is better)
Translates to: PHLPPGLASGLGIPSASICTHGP*DGTWLT
Trigger: GGTGAGCCAGGTCCCATCCCAAGGGCCATGTGTACA...AATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp CCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTCCTCTACTAGGCTTCTaGCCTGGGCAGGGTGGTTCT +
Preference number: 4 (lower is better)
Translates to: PHLPPGLASGLGIPSASIPLLGF*PGQGGS
Trigger: AGAACCACCCTGCCCAGGCCAGAAGCCTAGTAGAGG...AATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp CTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCGGGGACCCGAAGCTTTaGGGAGAAGCAGCTGGGGAA +
Preference number: 4 (lower is better)
Translates to: LPPGLASGLGIPSASITSGDPKL*GEAAGE
Trigger: TTCCCCAGCTGCTTCTCCCCAAAGCTTCGGGTCCCC...GCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp TCCACATCCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCACCTTCCCCCTGGTTTaGCTTCAGGTCTTGGCATAC +
Preference number: 4 (lower is better)
Translates to: STSPPSPWFGFRSWHTKCTFPLV*LQVLAY
Trigger: GTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGT...GCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGGATGTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR TCA 90 bp TCCACATCCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCAGCTGCCACCATCTCTaGATCTGCCAAACCACGAAT +
Preference number: 4 (lower is better)
Translates to: STSPPSPWFGFRSWHTKCSCHHL*ICQTTN
Trigger: ATTCGTGGTTTGGCAGATTCAGAGATGGTGGCAGCT...GCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGGATGTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000312292.6
CDS-3UTR TCA 90 bp TTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCCCTGCTGGCGGTTCCCTaGTGCTATCTTGTGCCTCAC +
Preference number: 4 (lower is better)
Translates to: FPLVWLQVLAYQVLVLPALLAVP*CYLVPH
Trigger: GTGAGGCACAAGATAGCATCAGGGAACCGCCAGCAG...GGCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR TCA 90 bp TTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCCGCAAGGGACTGGCATTaGAGACTCAGAGGCCTGAGG +
Preference number: 4 (lower is better)
Translates to: FPLVWLQVLAYQVLVLPAARDWH*RLRGLR
Trigger: CCTCAGGCCTCTGAGTCTTCAATGCCAGTCCCTTGC...GGCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR TCA 90 bp CTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCGCAAGGGACTGGCATTaGAGACTCAGAGGCCTGAGG +
Preference number: 4 (lower is better)
Translates to: LPPGLASGLGIPSASITSARDWH*RLRGLR
Trigger: CCTCAGGCCTCTGAGTCTTCAATGCCAGTCCCTTGC...GCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR TCA 90 bp CTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCCCAGACTCCTGTGGCTaGAGCTGGGAAGAGGATTGG +
Preference number: 4 (lower is better)
Translates to: LPPGLASGLGIPSASITSPDSCG*SWEEDW
Trigger: CCAATCCTCTTCCCAGCTTCAGCCACAGGAGTCTGG...GCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR TCA 90 bp TTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCCCCAGACTCCTGTGGCTaGAGCTGGGAAGAGGATTGG +
Preference number: 4 (lower is better)
Translates to: FPLVWLQVLAYQVLVLPAPDSCG*SWEEDW
Trigger: CCAATCCTCTTCCCAGCTTCAGCCACAGGAGTCTGG...GGCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR GCA 90 bp CTCCACATCCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGGGCTGCATGACTGTTTaGTCTGGTATCCCTATAGCC +
Preference number: 4 (lower is better)
Translates to: LHIPTFPLVWLQVLAYQVGCMTV*SGIPIA
Trigger: GGCTATAGGGATACCAGAGCAAACAGTCATGCAGCC...CACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGGATGTGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR GCA 90 bp GTCTCCACATCCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGGGCTGCATGACTGTTTaGTCTGGTATCCCTATAGCC +
Preference number: 4 (lower is better)
Translates to: VSTSPPSPWFGFRSWHTKGCMTV*SGIPIA
Trigger: GGCTATAGGGATACCAGAGCAAACAGTCATGCAGCC...CTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGGATGTGGAGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR GCA 90 bp CTCCACATCCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCAGAGGTTCTCTTTCTaGCCCATGGTCTCCCACAAA +
Preference number: 4 (lower is better)
Translates to: LHIPTFPLVWLQVLAYQVQRFSF*PMVSHK
Trigger: TTTGTGGGAGACCATGGGGCAGAAAGAGAACCTCTG...CACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGGATGTGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR GCA 90 bp TTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCCGGGTGGTTGGAGGTGTaGTATGAACAGGGTCTGGGG +
Preference number: 4 (lower is better)
Translates to: FPLVWLQVLAYQVLVLPAGWLEV*YEQGLG
Trigger: CCCCAGACCCTGTTCATAGCACACCTCCAACCACCC...GGCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR GCA 90 bp TTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCCACCCTTGTTCCGCCCTaGCAGACTCCTGTGGCTGAA +
Preference number: 4 (lower is better)
Translates to: FPLVWLQVLAYQVLVLPATLVPP*QTPVAE
Trigger: TTCAGCCACAGGAGTCTGGCAGGGCGGAACAAGGGT...GGCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR GCA 90 bp CCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCCTTTACTTGCTCTTCGCCCTaGCTCTGGCTGATCCTGGGG +
Preference number: 4 (lower is better)
Translates to: PLVWLQVLAYQVLVLPAFTCSSP*LWLILG
Trigger: CCCCAGGATCAGCCAGAGGCAGGGCGAAGAGCAAGT...AAAGGCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR GCA 90 bp TTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCCGGTCAGGATGTCACTTaGTCTTCGCCCTGCCTCTGG +
Preference number: 4 (lower is better)
Translates to: FPLVWLQVLAYQVLVLPAGQDVT*SSPCLW
Trigger: CCAGAGGCAGGGCGAAGAGCAAGTGACATCCTGACC...GGCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp CCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCCTTTCTCAGAACCACAGGATaGCTGGGGTGGGGCTGGAGT +
Preference number: 4 (lower is better)
Translates to: PLVWLQVLAYQVLVLPAFLRTTG*LGWGWS
Trigger: ACTCCAGCCCCACCCCAGCCATCCTGTGGTTCTGAG...AAAGGCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp TTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCCAGATGGGGAAGGATCTaGAAGGGCTCACGGGCTGCA +
Preference number: 4 (lower is better)
Translates to: FPLVWLQVLAYQVLVLPARWGRI*KGSRAA
Trigger: TGCAGCCCGTGAGCCCTTCCAGATCCTTCCCCATCT...GGCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp TCTGGTATCCCTATAGCCTTGAGGAGGCCCTCAGAACCACAGGATGGCTGGGGTGCCTCACAGGAAAGCTaGTCAGAATCTGGAAGATGG +
Preference number: 4 (lower is better)
Translates to: SGIPIALRRPSEPQDGWGASQES*SESGRW
Trigger: CCATCTTCCAGATTCTGACCAGCTTTCCTGTGAGGC...ACCCCAGCCATCCTGTGGTTCTGAGGGCCTCCTCAAGGCTATAGGGATACCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416537.2
CDS-3UTR CCA 90 bp CTCCACATCCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGATAGTATGGGCCCCATaGGTAGAAAACTGGGCTGAG +
Preference number: 4 (lower is better)
Translates to: LHIPTFPLVWLQVLAYQVIVWAP*VENWAE
Trigger: CTCAGCCCAGTTTTCTACCCATGGGGCCCATACTAT...CACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGGATGTGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp CTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCTTCCAGGGGACTGTGTaGGTGCCTCAGCGCCAGATA +
Preference number: 4 (lower is better)
Translates to: LPPGLASGLGIPSASITSFQGTV*VPQRQI
Trigger: TATCTGGCGCTGAGGCACCCACACAGTCCCCTGGAA...GCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp GTCTCCACATCCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGGTTGAGGTCCAAGACTaGAGACTCAAAAGCCCAGAG +
Preference number: 4 (lower is better)
Translates to: VSTSPPSPWFGFRSWHTKVEVQD*RLKSPE
Trigger: CTCTGGGCTTTTGAGTCTCCAGTCTTGGACCTCAAC...CTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGGATGTGGAGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp CCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTGCTGGAGCCCCTACCTaGGAACACAGGAACACAGTT +
Preference number: 4 (lower is better)
Translates to: PHLPPGLASGLGIPSASIAGAPT*EHRNTV
Trigger: AACTGTGTTCCTGTGTTCCCAGGTAGGGGCTCCAGC...AATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp CCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTAGTTTGAGGATGGGCTaGAGCCCCTACCTGGGAACA +
Preference number: 4 (lower is better)
Translates to: PHLPPGLASGLGIPSASISLRMG*SPYLGT
Trigger: TGTTCCCAGGTAGGGGCTCCAGCCCATCCTCAAACT...AATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp CCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCCTTTTCGCTAGGGTGGGAGGCTaGGGTACTGGGTGTAGGGGA +
Preference number: 4 (lower is better)
Translates to: PGLASGLGIPSASITSLFARVGG*GTGCRG
Trigger: TCCCCTACACCCAGTACCCCAGCCTCCCACCCTAGC...GAAAAGGCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp CCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTGGCACGTTACTCCCTTaGGTAGACCAGGATGAGTGC +
Preference number: 4 (lower is better)
Translates to: PHLPPGLASGLGIPSASIGTLLP*VDQDEC
Trigger: GCACTCATCCTGGTCTACCCAAGGGAGTAACGTGCC...AATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp CTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCCTCTGCCTTAACCCCTaGGCACGTTACTCCCTTGGG +
Preference number: 4 (lower is better)
Translates to: LPPGLASGLGIPSASITSLCLNP*ARYSLG
Trigger: CCCAAGGGAGTAACGTGCCCAGGGGTTAAGGCAGAG...GCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp CTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCCCTTGGGATGGGACCTaGCTCACCATCTTCCCCTTC +
Preference number: 4 (lower is better)
Translates to: LPPGLASGLGIPSASITSPWDGT*LTIFPF
Trigger: GAAGGGGAAGATGGTGAGCCAGGTCCCATCCCAAGG...GCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp CCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCCTTTTCTCTTCGCCCTGCCTCTaGCTGATCCTGGGGACCCGA +
Preference number: 4 (lower is better)
Translates to: PGLASGLGIPSASITSLFSSPCL*LILGTR
Trigger: TCGGGTCCCCAGGATCAGCCAGAGGCAGGGCGAAGA...GAAAAGGCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR TCA 90 bp CCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTTTCTGCTTACACAGGTaGTCAAGGAAGGCCACACGG +
Preference number: 4 (lower is better)
Translates to: PHLPPGLASGLGIPSASIFCLHR*SRKATR
Trigger: CCGTGTGGCCTTCCTTGATCACCTGTGTAAGCAGAA...AATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR TCA 90 bp CCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCCTTTGGCTCACGGGCTGCATaGCTGTTTGCTCTGGTATCC +
Preference number: 4 (lower is better)
Translates to: PLVWLQVLAYQVLVLPAFGSRAA*LFALVS
Trigger: GGATACCAGAGCAAACAGTCATGCAGCCCGTGAGCC...AAAGGCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR TCA 90 bp TCCACATCCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCAACTTTTCTGGGTTCTaGCAGAGAAGCTGGGGATTG +
Preference number: 4 (lower is better)
Translates to: STSPPSPWFGFRSWHTKCNFSGF*QRSWGL
Trigger: CAATCCCCAGCTTCTCTGTCAGAACCCAGAAAAGTT...GCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGGATGTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR TCA 90 bp CTCCACATCCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGAACTTTTCTGGGTTCTaGCAGAGAAGCTGGGGATTG +
Preference number: 4 (lower is better)
Translates to: LHIPTFPLVWLQVLAYQVNFSGF*QRSWGL
Trigger: CAATCCCCAGCTTCTCTGTCAGAACCCAGAAAAGTT...CACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGGATGTGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR TCA 90 bp GTCTCCACATCCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTTGGGTAGACCAGGATaGGTGCGTTCAATCTTCACA +
Preference number: 4 (lower is better)
Translates to: VSTSPPSPWFGFRSWHTKLGRPG*VRSIFT
Trigger: TGTGAAGATTGAACGCACTCATCCTGGTCTACCCAA...CTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGGATGTGGAGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR TCA 90 bp CCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCCTTTTCGGATCCCAGGATGGGTaGGCAACTCTGGGACAGTCC +
Preference number: 4 (lower is better)
Translates to: PGLASGLGIPSASITSLFGSQDG*ATLGQS
Trigger: GGACTGTCCCAGAGTTGCTCACCCATCCTGGGATCC...GAAAAGGCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR TCA 90 bp TTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCCGAGCTGCAAAATGATTaGCTTGGGCCAGGGGCTCTG +
Preference number: 4 (lower is better)
Translates to: FPLVWLQVLAYQVLVLPAELQND*LGPGAL
Trigger: CAGAGCCCCTGGCCCAAGTCAATCATTTTGCAGCTC...GGCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR TCA 90 bp TCCACATCCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTTGAGGATGACAACTTaGAGAGTGGGGGCATGGATT +
Preference number: 4 (lower is better)
Translates to: STSPPSPWFGFRSWHTKCLRMTT*RVGAWI
Trigger: AATCCATGCCCCCACTCTTCAAGTTGTCATCCTCAA...GCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGGATGTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR TCA 90 bp GTCTCCACATCCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTTGAGGATGACAACTTaGAGAGTGGGGGCATGGATT +
Preference number: 4 (lower is better)
Translates to: VSTSPPSPWFGFRSWHTKLRMTT*RVGAWI
Trigger: AATCCATGCCCCCACTCTTCAAGTTGTCATCCTCAA...CTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGGATGTGGAGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR TCA 90 bp CTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCCAGAACCTTAGAGTTTaGGGGTTCTCCTGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: LPPGLASGLGIPSASITSQNLRV*GFSWAW
Trigger: CCAGGCCCAGGAGAACCCTCAAACTCTAAGGTTCTG...GCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR TCA 90 bp TCCACATCCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCGTCCTTTCTCTTGCCTaGGACCAGAACCTTAGAGTT +
Preference number: 4 (lower is better)
Translates to: STSPPSPWFGFRSWHTKCVLSLA*DQNLRV
Trigger: AACTCTAAGGTTCTGGTCTCAGGCAAGAGAAAGGAC...GCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGGATGTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR TCA 90 bp CTCCACATCCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCAGCCTTTTCTCTACTaGCTAGATTTGGTGGGTAGG +
Preference number: 4 (lower is better)
Translates to: LHIPTFPLVWLQVLAYQVQPFLY*LDLVGR
Trigger: CCTACCCACCAAATCTAGTCAGTAGAGAAAAGGCTG...CACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGGATGTGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR GCA 90 bp TTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCCAGCTCTCTACTCCACTaGCAGGCATGGATCCCAGGA +
Preference number: 4 (lower is better)
Translates to: FPLVWLQVLAYQVLVLPASSLLH*QAWIPG
Trigger: TCCTGGGATCCATGCCTGGCAGTGGAGTAGAGAGCT...GGCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR GCA 90 bp CCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCCTTTACCCTTGTTCCGCCCTaGCAGACTCCTGTGGCTGAA +
Preference number: 4 (lower is better)
Translates to: PLVWLQVLAYQVLVLPAFTLVPP*QTPVAE
Trigger: TTCAGCCACAGGAGTCTGGCAGGGCGGAACAAGGGT...AAAGGCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR GCA 90 bp GTCTCCACATCCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTTGGGTTTCCTAGGGTaGTCTCTCTTTTTGGCTGAG +
Preference number: 4 (lower is better)
Translates to: VSTSPPSPWFGFRSWHTKLGFLG*SLFLAE
Trigger: CTCAGCCAAAAAGAGAGAGCACCCTAGGAAACCCAA...CTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGGATGTGGAGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR GCA 90 bp TCCACATCCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTTGGGTTTCCTAGGGTaGTCTCTCTTTTTGGCTGAG +
Preference number: 4 (lower is better)
Translates to: STSPPSPWFGFRSWHTKCLGFLG*SLFLAE
Trigger: CTCAGCCAAAAAGAGAGAGCACCCTAGGAAACCCAA...GCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGGATGTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR GCA 90 bp GTGGTAGTTCCTGGGCCCACATTCATACCAATGACCTCACATGTGGTGTCAGCAAGGAAGGCCACACGGTaGAGAAGTGGTAGTTCCTGG +
Preference number: 4 (lower is better)
Translates to: VVVPGPTFIPMTSHVVSARKATR*RSGSSW
Trigger: CCAGGAACTACCACTTCTGCACCGTGTGGCCTTCCT...TGCTGACACCACATGTGAGGTCATTGGTATGAATGTGGGCCCAGGAACTACCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416537.2
CDS-3UTR CCA 90 bp CCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCCTTTTCCTCAGAACCACAGGATaGCTGGGGTGGGGCTGGAGT +
Preference number: 4 (lower is better)
Translates to: PGLASGLGIPSASITSLFLRTTG*LGWGWS
Trigger: ACTCCAGCCCCACCCCAGCCATCCTGTGGTTCTGAG...GAAAAGGCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp CCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCCTTTAGATGGGGAAGGATCTaGAAGGGCTCACGGGCTGCA +
Preference number: 4 (lower is better)
Translates to: PLVWLQVLAYQVLVLPAFRWGRI*KGSRAA
Trigger: TGCAGCCCGTGAGCCCTTCCAGATCCTTCCCCATCT...AAAGGCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp CTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCCTGAGCTCAGGAAGATaGCCTCCAAGGACTCGCTGT +
Preference number: 4 (lower is better)
Translates to: LPPGLASGLGIPSASITSLSSGR*PPRTRC
Trigger: ACAGCGAGTCCTTGGAGGCCATCTTCCTGAGCTCAG...GCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp GTCTCCACATCCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGGGAGGCTCAAAAGCTTaGGGCATCTTTTTGTGTCCT +
Preference number: 4 (lower is better)
Translates to: VSTSPPSPWFGFRSWHTKGGSKA*GIFLCP
Trigger: AGGACACAAAAAGATGCCCCAAGCTTTTGAGCCTCC...CTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGGATGTGGAGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp GTCTCCACATCCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGGGGCTTATATCTGGATaGATCTTCCAGGGAACTCTC +
Preference number: 4 (lower is better)
Translates to: VSTSPPSPWFGFRSWHTKGLISG*IFQGTL
Trigger: GAGAGTTCCCTGGAAGATCCATCCAGATATAAGCCC...CTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGGATGTGGAGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp TCCACATCCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCACTGGGGCTTATATCTaGATGGATCTTCCAGGGAAC +
Preference number: 4 (lower is better)
Translates to: STSPPSPWFGFRSWHTKCTGAYI*MDLPGN
Trigger: GTTCCCTGGAAGATCCATCCAGATATAAGCCCCAGT...GCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGGATGTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp GTCTCCACATCCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTCTCTGCATTCCCACTaGGGCTTATATCTGGATGGA +
Preference number: 4 (lower is better)
Translates to: VSTSPPSPWFGFRSWHTKSLHSH*GLYLDG
Trigger: TCCATCCAGATATAAGCCCCAGTGGGAATGCAGAGA...CTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGGATGTGGAGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp TCCACATCCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTCTCTGCATTCCCACTaGGGCTTATATCTGGATGGA +
Preference number: 4 (lower is better)
Translates to: STSPPSPWFGFRSWHTKCSLHSH*GLYLDG
Trigger: TCCATCCAGATATAAGCCCCAGTGGGAATGCAGAGA...GCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGGATGTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp CTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCGGTTCCAGAGAGCTCTaGGTTGAGGTCCAAGACTGG +
Preference number: 4 (lower is better)
Translates to: LPPGLASGLGIPSASITSGSREL*VEVQDW
Trigger: CCAGTCTTGGACCTCAACCCAGAGCTCTCTGGAACC...GCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp CCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTTGTCTCAGATGCTGGTaGGACACATTCAGGGCTGGT +
Preference number: 4 (lower is better)
Translates to: PHLPPGLASGLGIPSASICLRCW*DTFRAG
Trigger: ACCAGCCCTGAATGTGTCCCACCAGCATCTGAGACA...AATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp CCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTTGGTGTCTCAGATGCTaGTGGGACACATTCAGGGCT +
Preference number: 4 (lower is better)
Translates to: PHLPPGLASGLGIPSASIWCLRC*WDTFRA
Trigger: AGCCCTGAATGTGTCCCACCAGCATCTGAGACACCA...AATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp CTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCTCAGACAGGACTCCCTaGGGGCCCATTACTAGAGAC +
Preference number: 4 (lower is better)
Translates to: LPPGLASGLGIPSASITSSDRTP*GPITRD
Trigger: GTCTCTAGTAATGGGCCCCCAGGGAGTCCTGTCTGA...GCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp GTCTCCACATCCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTTCCATAAGGGTGGTTaGAGGTGTGCTATGAACAGG +
Preference number: 4 (lower is better)
Translates to: VSTSPPSPWFGFRSWHTKFHKGG*RCAMNR
Trigger: CCTGTTCATAGCACACCTCCAACCACCCTTATGGAA...CTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGGATGTGGAGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp CTCCACATCCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGTTCCATAAGGGTGGTTaGAGGTGTGCTATGAACAGG +
Preference number: 4 (lower is better)
Translates to: LHIPTFPLVWLQVLAYQVFHKGG*RCAMNR
Trigger: CCTGTTCATAGCACACCTCCAACCACCCTTATGGAA...CACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGGATGTGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp CTCCACATCCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGAAGCCGAGGAATTCCTaGAATGCTCAGTATCCTTCC +
Preference number: 4 (lower is better)
Translates to: LHIPTFPLVWLQVLAYQVKPRNS*NAQYPS
Trigger: GGAAGGATACTGAGCATTCCAGGAATTCCTCGGCTT...CACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGGATGTGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp CTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCGCTGGAGCCCCTACCTaGGAACACAGGAACACAGTT +
Preference number: 4 (lower is better)
Translates to: LPPGLASGLGIPSASITSAGAPT*EHRNTV
Trigger: AACTGTGTTCCTGTGTTCCCAGGTAGGGGCTCCAGC...GCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp TTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCCGCTGGAGCCCCTACCTaGGAACACAGGAACACAGTT +
Preference number: 4 (lower is better)
Translates to: FPLVWLQVLAYQVLVLPAAGAPT*EHRNTV
Trigger: AACTGTGTTCCTGTGTTCCCAGGTAGGGGCTCCAGC...GGCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp TTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCCAGTTTGAGGATGGGCTaGAGCCCCTACCTGGGAACA +
Preference number: 4 (lower is better)
Translates to: FPLVWLQVLAYQVLVLPASLRMG*SPYLGT
Trigger: TGTTCCCAGGTAGGGGCTCCAGCCCATCCTCAAACT...GGCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp TTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCCAGAGGGCTGGGGCCTTaGGGAACTTCTCTTTGTTGC +
Preference number: 4 (lower is better)
Translates to: FPLVWLQVLAYQVLVLPARGLGP*GTSLCC
Trigger: GCAACAAAGAGAAGTTCCCCAAGGCCCCAGCCCTCT...GGCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp CCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTATGGGTGAGCAACTCTaGGACAGTCCATCTCTGGGA +
Preference number: 4 (lower is better)
Translates to: PHLPPGLASGLGIPSASIMGEQL*DSPSLG
Trigger: TCCCAGAGATGGACTGTCCCAGAGTTGCTCACCCAT...AATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp CTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCGCATGGATCCCAGGATaGGTGAGCAACTCTGGGACA +
Preference number: 4 (lower is better)
Translates to: LPPGLASGLGIPSASITSAWIPG*VSNSGT
Trigger: TGTCCCAGAGTTGCTCACCCATCCTGGGATCCATGC...GCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp CTCCACATCCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGGAGTCCCCAGAAGTCTaGAATTGTGGAGCTCAGAAT +
Preference number: 4 (lower is better)
Translates to: LHIPTFPLVWLQVLAYQVESPEV*NCGAQN
Trigger: ATTCTGAGCTCCACAATTCCAGACTTCTGGGGACTC...CACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGGATGTGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp GTCTCCACATCCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGGAGTCCCCAGAAGTCTaGAATTGTGGAGCTCAGAAT +
Preference number: 4 (lower is better)
Translates to: VSTSPPSPWFGFRSWHTKESPEV*NCGAQN
Trigger: ATTCTGAGCTCCACAATTCCAGACTTCTGGGGACTC...CTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGGATGTGGAGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp CCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCCTTTCCTGCCAGACTCCTGTaGCTGAAGCTGGGAAGAGGA +
Preference number: 4 (lower is better)
Translates to: PLVWLQVLAYQVLVLPAFPARLL*LKLGRG
Trigger: TCCTCTTCCCAGCTTCAGCCACAGGAGTCTGGCAGG...AAAGGCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp CTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCCTCCATGTGTACACATaGCCCTTGGGATGGGACCTG +
Preference number: 4 (lower is better)
Translates to: LPPGLASGLGIPSASITSLHVYT*PLGWDL
Trigger: CAGGTCCCATCCCAAGGGCCATGTGTACACATGGAG...GCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp TTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCCGGACAGTGCTTACAGTaGCGAGGGGTCAGGATGTCA +
Preference number: 4 (lower is better)
Translates to: FPLVWLQVLAYQVLVLPAGQCLQ*RGVRMS
Trigger: TGACATCCTGACCCCTCGCCACTGTAAGCACTGTCC...GGCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp CCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTGTGGGTAGGGGTCGATaGTTATCCAGGCATTTGGCT +
Preference number: 4 (lower is better)
Translates to: PHLPPGLASGLGIPSASIVGRGR*LSRHLA
Trigger: AGCCAAATGCCTGGATAACCATCGACCCCTACCCAC...AATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp CCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCTTCCCCCTGGTTTaGCTTCAGGTCTTGGCATAC +
Preference number: 4 (lower is better)
Translates to: PHLPPGLASGLGIPSASITFPLV*LQVLAY
Trigger: GTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGT...AATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp GGGTGGGGCTGGAGTGGCTTGCTCTCCAGTGGGAGCTTCTTTGGTAGGAGAACAAGAAGTGGTAGTTCCTaGGCCCACATTCATACCAAT +
Preference number: 4 (lower is better)
Translates to: GWGWSGLLSSGSFFGRRTRSGSS*AHIHTN
Trigger: ATTGGTATGAATGTGGGCCCAGGAACTACCACTTCT...TGTTCTCCTACCAAAGAAGCTCCCACTGGAGAGCAAGCCACTCCAGCCCCACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416537.2
CDS-3UTR TCA 90 bp TTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCCGGTAGAAAACTGGGCTaGGGAGTGATACTGGGGAAG +
Preference number: 4 (lower is better)
Translates to: FPLVWLQVLAYQVLVLPAGRKLG*GVILGK
Trigger: CTTCCCCAGTATCACTCCTCAGCCCAGTTTTCTACC...GGCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR TCA 90 bp CTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCGGTAGAAAACTGGGCTaGGGAGTGATACTGGGGAAG +
Preference number: 4 (lower is better)
Translates to: LPPGLASGLGIPSASITSGRKLG*GVILGK
Trigger: CTTCCCCAGTATCACTCCTCAGCCCAGTTTTCTACC...GCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR TCA 90 bp CCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCCTTTCAGAGAGCTCTGGGTTaGGGTCCAAGACTGGAGACT +
Preference number: 4 (lower is better)
Translates to: PLVWLQVLAYQVLVLPAFQRALG*GPRLET
Trigger: AGTCTCCAGTCTTGGACCTCAACCCAGAGCTCTCTG...AAAGGCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR TCA 90 bp TTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCCGTTGGAGGTGTGCTATaGACAGGGTCTGGGGAATCA +
Preference number: 4 (lower is better)
Translates to: FPLVWLQVLAYQVLVLPAVGGVL*TGSGES
Trigger: TGATTCCCCAGACCCTGTTCATAGCACACCTCCAAC...GGCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR TCA 90 bp CTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCCTTCCATGTAGCTTCTaGTGTAGCGAGGCATTCCCC +
Preference number: 4 (lower is better)
Translates to: LPPGLASGLGIPSASITSLPCSF*CSEAFP
Trigger: GGGGAATGCCTCGCTACATCAGAAGCTACATGGAAG...GCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR TCA 90 bp CCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTGCAGTTTCTTCAGCCTaGGTTTCAGCTCTCTACTCC +
Preference number: 4 (lower is better)
Translates to: PHLPPGLASGLGIPSASIAVSSA*VSALYS
Trigger: GGAGTAGAGAGCTGAAACTCAGGCTGAAGAAACTGC...AATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR TCA 90 bp CCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCCTTTGAGCTGCAAAATGATTaGCTTGGGCCAGGGGCTCTG +
Preference number: 4 (lower is better)
Translates to: PLVWLQVLAYQVLVLPAFELQND*LGPGAL
Trigger: CAGAGCCCCTGGCCCAAGTCAATCATTTTGCAGCTC...AAAGGCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR GCA 90 bp CCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTGGCTGCATGACTGTTTaGTCTGGTATCCCTATAGCC +
Preference number: 4 (lower is better)
Translates to: PHLPPGLASGLGIPSASIGCMTV*SGIPIA
Trigger: GGCTATAGGGATACCAGAGCAAACAGTCATGCAGCC...AATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR GCA 90 bp CCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCCTTTGAAGGGCTCACGGGCTaGATGACTGTTTGCTCTGGT +
Preference number: 4 (lower is better)
Translates to: PLVWLQVLAYQVLVLPAFEGLTG*MTVCSG
Trigger: ACCAGAGCAAACAGTCATGCAGCCCGTGAGCCCTTC...AAAGGCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR GCA 90 bp TCCACATCCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTTCCTGAGTTTTCTCTaGATTCCCACTGGGGCTTAT +
Preference number: 4 (lower is better)
Translates to: STSPPSPWFGFRSWHTKCFLSFL*IPTGAY
Trigger: ATAAGCCCCAGTGGGAATGCAGAGAAAACTCAGGAA...GCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGGATGTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR GCA 90 bp CTCCACATCCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGTTCCTGAGTTTTCTCTaGATTCCCACTGGGGCTTAT +
Preference number: 4 (lower is better)
Translates to: LHIPTFPLVWLQVLAYQVFLSFL*IPTGAY
Trigger: ATAAGCCCCAGTGGGAATGCAGAGAAAACTCAGGAA...CACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGGATGTGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR GCA 90 bp CCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTCAGAGGTTCTCTTTCTaGCCCATGGTCTCCCACAAA +
Preference number: 4 (lower is better)
Translates to: PHLPPGLASGLGIPSASIQRFSF*PMVSHK
Trigger: TTTGTGGGAGACCATGGGGCAGAAAGAGAACCTCTG...AATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR GCA 90 bp TCCACATCCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCATAGTTGCTTTGGTCTaGGATAGGCTCACTTACGTG +
Preference number: 4 (lower is better)
Translates to: STSPPSPWFGFRSWHTKCIVALV*DRLTYV
Trigger: CACGTAAGTGAGCCTATCGCAGACCAAAGCAACTAT...GCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGGATGTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR GCA 90 bp CCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTCAGGCTGAGGTACTGTaGGCTGAACTTCTTGAGGAT +
Preference number: 4 (lower is better)
Translates to: PHLPPGLASGLGIPSASIQAEVL*AELLED
Trigger: ATCCTCAAGAAGTTCAGCGCACAGTACCTCAGCCTG...AATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR GCA 90 bp TCCACATCCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTTGGCTAACACCTTTTaGAAACCCCTGGTAAGGGAA +
Preference number: 4 (lower is better)
Translates to: STSPPSPWFGFRSWHTKCLANTF*KPLVRE
Trigger: TTCCCTTACCAGGGGTTTGCAAAAGGTGTTAGCCAA...GCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGGATGTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp GTCTCCACATCCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGCATGACTGTTTGCTCTaGTATCCCTATAGCCTTGAG +
Preference number: 4 (lower is better)
Translates to: VSTSPPSPWFGFRSWHTKHDCLL*YPYSLE
Trigger: CTCAAGGCTATAGGGATACCAGAGCAAACAGTCATG...CTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGGATGTGGAGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp TTCCCTGATGCTATCTTGTGCCTCACAGGAAAGCTGGTCAGAATCTGGAAGATGAGATGGGGAAGGATCTaGAAGGGCTCACGGGCTGCA +
Preference number: 4 (lower is better)
Translates to: FPDAILCLTGKLVRIWKMRWGRI*KGSRAA
Trigger: TGCAGCCCGTGAGCCCTTCCAGATCCTTCCCCATCT...CATCTTCCAGATTCTGACCAGCTTTCCTGTGAGGCACAAGATAGCATCAGGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416537.2
CDS-3UTR CCA 90 bp CCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTCTTTTTCTCTGCTGCTaGCGGTTCCCTGATGCTATC +
Preference number: 4 (lower is better)
Translates to: PHLPPGLASGLGIPSASILFLCC*RFPDAI
Trigger: GATAGCATCAGGGAACCGCCAGCAGCAGAGAAAAAG...AATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp CCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCCTTTCTGAGCTCAGGAAGATaGCCTCCAAGGACTCGCTGT +
Preference number: 4 (lower is better)
Translates to: PLVWLQVLAYQVLVLPAFLSSGR*PPRTRC
Trigger: ACAGCGAGTCCTTGGAGGCCATCTTCCTGAGCTCAG...AAAGGCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp CCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTATAGTATGGGCCCCATaGGTAGAAAACTGGGCTGAG +
Preference number: 4 (lower is better)
Translates to: PHLPPGLASGLGIPSASIIVWAP*VENWAE
Trigger: CTCAGCCCAGTTTTCTACCCATGGGGCCCATACTAT...AATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp GTCTCCACATCCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGAGATCTTCCATAGTATaGGCCCCATGGGTAGAAAAC +
Preference number: 4 (lower is better)
Translates to: VSTSPPSPWFGFRSWHTKRSSIV*APWVEN
Trigger: GTTTTCTACCCATGGGGCCCATACTATGGAAGATCT...CTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGGATGTGGAGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp TCCACATCCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCAGATCTTCCATAGTATaGGCCCCATGGGTAGAAAAC +
Preference number: 4 (lower is better)
Translates to: STSPPSPWFGFRSWHTKCRSSIV*APWVEN
Trigger: GTTTTCTACCCATGGGGCCCATACTATGGAAGATCT...GCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGGATGTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp CCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCCTTTTCTTCCAGGGGACTGTGTaGGTGCCTCAGCGCCAGATA +
Preference number: 4 (lower is better)
Translates to: PGLASGLGIPSASITSLFFQGTV*VPQRQI
Trigger: TATCTGGCGCTGAGGCACCCACACAGTCCCCTGGAA...GAAAAGGCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp CCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTGTTGAGGTCCAAGACTaGAGACTCAAAAGCCCAGAG +
Preference number: 4 (lower is better)
Translates to: PHLPPGLASGLGIPSASIVEVQD*RLKSPE
Trigger: CTCTGGGCTTTTGAGTCTCCAGTCTTGGACCTCAAC...AATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp CTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCTGGTGTCTCAGATGCTaGTGGGACACATTCAGGGCT +
Preference number: 4 (lower is better)
Translates to: LPPGLASGLGIPSASITSWCLRC*WDTFRA
Trigger: AGCCCTGAATGTGTCCCACCAGCATCTGAGACACCA...GCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp CCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCCTTTTCAGACAGGACTCCCTaGGGGCCCATTACTAGAGAC +
Preference number: 4 (lower is better)
Translates to: PLVWLQVLAYQVLVLPAFSDRTP*GPITRD
Trigger: GTCTCTAGTAATGGGCCCCCAGGGAGTCCTGTCTGA...AAAGGCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp TCCACATCCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCAGGATTGATTCTGTGTaGTTCCATAAGGGTGGTTGG +
Preference number: 4 (lower is better)
Translates to: STSPPSPWFGFRSWHTKCRIDSV*FHKGGW
Trigger: CCAACCACCCTTATGGAACCACACAGAATCAATCCT...GCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGGATGTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp CCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCCTTTTCGCTGAGGGCCAGAGATaGAGACCTAGAAGCCGAGGA +
Preference number: 4 (lower is better)
Translates to: PGLASGLGIPSASITSLFAEGQR*RPRSRG
Trigger: TCCTCGGCTTCTAGGTCTCCATCTCTGGCCCTCAGC...GAAAAGGCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp CCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCCTTTAGTTTGAGGATGGGCTaGAGCCCCTACCTGGGAACA +
Preference number: 4 (lower is better)
Translates to: PLVWLQVLAYQVLVLPAFSLRMG*SPYLGT
Trigger: TGTTCCCAGGTAGGGGCTCCAGCCCATCCTCAAACT...AAAGGCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp CCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCCTTTAGAGGGCTGGGGCCTTaGGGAACTTCTCTTTGTTGC +
Preference number: 4 (lower is better)
Translates to: PLVWLQVLAYQVLVLPAFRGLGP*GTSLCC
Trigger: GCAACAAAGAGAAGTTCCCCAAGGCCCCAGCCCTCT...AAAGGCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp CTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCATGGGTGAGCAACTCTaGGACAGTCCATCTCTGGGA +
Preference number: 4 (lower is better)
Translates to: LPPGLASGLGIPSASITSMGEQL*DSPSLG
Trigger: TCCCAGAGATGGACTGTCCCAGAGTTGCTCACCCAT...GCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp CTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCATAAATCTGCTGTGGTaGGCAGGAAGGGAGTCCCCA +
Preference number: 4 (lower is better)
Translates to: LPPGLASGLGIPSASITSINLLW*AGRESP
Trigger: TGGGGACTCCCTTCCTGCCCACCACAGCAGATTTAT...GCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp TTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCCATAAATCTGCTGTGGTaGGCAGGAAGGGAGTCCCCA +
Preference number: 4 (lower is better)
Translates to: FPLVWLQVLAYQVLVLPAINLLW*AGRESP
Trigger: TGGGGACTCCCTTCCTGCCCACCACAGCAGATTTAT...GGCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp TTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCCAGTGGGGGCATGGATTaGGGGGATAAATCTGCTGTG +
Preference number: 4 (lower is better)
Translates to: FPLVWLQVLAYQVLVLPASGGMD*GDKSAV
Trigger: CACAGCAGATTTATCCCCCCAATCCATGCCCCCACT...GGCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp CCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCCTTTACATGGCCCTTGGGATaGGACCTGGCTCACCATCTT +
Preference number: 4 (lower is better)
Translates to: PLVWLQVLAYQVLVLPAFTWPLG*DLAHHL
Trigger: AAGATGGTGAGCCAGGTCCCATCCCAAGGGCCATGT...AAAGGCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp CCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCCTTTGGACAGTGCTTACAGTaGCGAGGGGTCAGGATGTCA +
Preference number: 4 (lower is better)
Translates to: PLVWLQVLAYQVLVLPAFGQCLQ*RGVRMS
Trigger: TGACATCCTGACCCCTCGCCACTGTAAGCACTGTCC...AAAGGCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR TCA 90 bp CCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTTCCCCTACAATAGACTaGGAATCAGACAAGACTCCC +
Preference number: 4 (lower is better)
Translates to: PHLPPGLASGLGIPSASISPTID*ESDKTP
Trigger: GGGAGTCTTGTCTGATTCTCAGTCTATTGTAGGGGA...AATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR TCA 90 bp TTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCCGCAGTTTCTTCAGCCTaGGTTTCAGCTCTCTACTCC +
Preference number: 4 (lower is better)
Translates to: FPLVWLQVLAYQVLVLPAAVSSA*VSALYS
Trigger: GGAGTAGAGAGCTGAAACTCAGGCTGAAGAAACTGC...GGCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR TCA 90 bp CTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCGCAGTTTCTTCAGCCTaGGTTTCAGCTCTCTACTCC +
Preference number: 4 (lower is better)
Translates to: LPPGLASGLGIPSASITSAVSSA*VSALYS
Trigger: GGAGTAGAGAGCTGAAACTCAGGCTGAAGAAACTGC...GCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR TCA 90 bp CCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCCTTTTCGAGCTGCAAAATGATTaGCTTGGGCCAGGGGCTCTG +
Preference number: 4 (lower is better)
Translates to: PGLASGLGIPSASITSLFELQND*LGPGAL
Trigger: CAGAGCCCCTGGCCCAAGTCAATCATTTTGCAGCTC...GAAAAGGCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR TCA 90 bp CCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCCTTTTCATTTTCTCCCCTCTCTaGGACCCTTGTTCCGCCCTG +
Preference number: 4 (lower is better)
Translates to: PGLASGLGIPSASITSLFIFSPL*DPCSAL
Trigger: CAGGGCGGAACAAGGGTCTCAGAGAGGGGAGAAAAT...GAAAAGGCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR TCA 90 bp CCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTCAGCCTTTTCTCTACTaGCTAGATTTGGTGGGTAGG +
Preference number: 4 (lower is better)
Translates to: PHLPPGLASGLGIPSASIQPFLY*LDLVGR
Trigger: CCTACCCACCAAATCTAGTCAGTAGAGAAAAGGCTG...AATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR GCA 90 bp CTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCGGTAGTTCCTTGCCTTaGACCATATTCCCAGAGCAC +
Preference number: 4 (lower is better)
Translates to: LPPGLASGLGIPSASITSGSSLP*TIFPEH
Trigger: GTGCTCTGGGAATATGGTGCAAGGCAAGGAACTACC...GCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312292.6
ENST00000421362.6
CDS-3UTR GCA 90 bp CCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCCTTTTCGAAGGGCTCACGGGCTaGATGACTGTTTGCTCTGGT +
Preference number: 4 (lower is better)
Translates to: PGLASGLGIPSASITSLFEGLTG*MTVCSG
Trigger: ACCAGAGCAAACAGTCATGCAGCCCGTGAGCCCTTC...GAAAAGGCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR GCA 90 bp GGTTCCCTGATGCTATCTTGTGCCTCACAGGAAAGCTGGTCAGAATCTGGAAGATGGCTTTTTCTCTGCTaGTGGCGGTTCCCTGATGCT +
Preference number: 4 (lower is better)
Translates to: GSLMLSCASQESWSESGRWLFLC*WRFPDA
Trigger: AGCATCAGGGAACCGCCAGCAGCAGAGAAAAAGCCA...TCTTCCAGATTCTGACCAGCTTTCCTGTGAGGCACAAGATAGCATCAGGGAACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416537.2
CDS-3UTR GCA 90 bp CTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCGTCTGGGGAATCAGATaGCCAGAGGTTCTCTTTCTG +
Preference number: 4 (lower is better)
Translates to: LPPGLASGLGIPSASITSVWGIR*PEVLFL
Trigger: CAGAAAGAGAACCTCTGGGCATCTGATTCCCCAGAC...GCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR GCA 90 bp CTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCCTTTCTTTGCTCCACTaGCTCCCCGTCAGGCTTATA +
Preference number: 4 (lower is better)
Translates to: LPPGLASGLGIPSASITSLSLLH*LPVRLI
Trigger: TATAAGCCTGACGGGGAGGCAGTGGAGCAAAGAAAG...GCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR GCA 90 bp CTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCCAGGCTGAGGTACTGTaGGCTGAACTTCTTGAGGAT +
Preference number: 4 (lower is better)
Translates to: LPPGLASGLGIPSASITSQAEVL*AELLED
Trigger: ATCCTCAAGAAGTTCAGCGCACAGTACCTCAGCCTG...GCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR GCA 90 bp CCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTTTGGGTTTCCTAGGGTaGTCTCTCTTTTTGGCTGAG +
Preference number: 4 (lower is better)
Translates to: PHLPPGLASGLGIPSASILGFLG*SLFLAE
Trigger: CTCAGCCAAAAAGAGAGAGCACCCTAGGAAACCCAA...AATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR GCA 90 bp CCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTTCTTCTATGGTCTCCTaGTTTGGGTTTCCTAGGGTG +
Preference number: 4 (lower is better)
Translates to: PHLPPGLASGLGIPSASISSMVS*FGFPRV
Trigger: CACCCTAGGAAACCCAAAGCAGGAGACCATAGAAGA...AATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR GCA 90 bp CCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCTTTGGGGAAATGTaGTTACAGGGGCCTCTACTA +
Preference number: 4 (lower is better)
Translates to: PHLPPGLASGLGIPSASITFGEM*LQGPLL
Trigger: TAGTAGAGGCCCCTGTAAGCACATTTCCCCAAAGGT...AATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR GCA 90 bp TTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCCAGGAAGGCCACACGGTaGAGAAGTGGTAGTTCCTTT +
Preference number: 4 (lower is better)
Translates to: FPLVWLQVLAYQVLVLPARKATR*RSGSSF
Trigger: AAAGGAACTACCACTTCTGCACCGTGTGGCCTTCCT...GGCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000354479.5
CDS-3UTR CCA 90 bp CTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCTGTCACCAGATTTCCTaGACTCTGGAAGCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: LPPGLASGLGIPSASITSCHQIS*TLEAAA
Trigger: AGCAGCTGCTTCCAGAGTCCAGGAAATCTGGTGACA...GCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000312292.6
CDS-3UTR CCA 90 bp AGGGCTCACGGGCTGCATGACTGTTTGCTCTGGTATCCCTATAGCCTTGAGGAGTTTGGTAGGAGAACATaGCTTCAGTGGATCCAGAGA +
Preference number: 4 (lower is better)
Translates to: RAHGLHDCLLWYPYSLEEFGRRT*LQWIQR
Trigger: TCTCTGGATCCACTGAAGCCATGTTCTCCTACCAAA...CTCCTCAAGGCTATAGGGATACCAGAGCAAACAGTCATGCAGCCCGTGAGCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416537.2
CDS-3UTR CCA 90 bp ATTCATACCAATGACCTCACATGTGGTGTCAGCAGTCATTCATCCAGCTGTACACTCAGAACCACAGGATaGCTGGGGTGGGGCTGGAGT +
Preference number: 4 (lower is better)
Translates to: IHTNDLTCGVSSHSSSCTLRTTG*LGWGWS
Trigger: ACTCCAGCCCCACCCCAGCCATCCTGTGGTTCTGAG...TGTACAGCTGGATGAATGACTGCTGACACCACATGTGAGGTCATTGGTATGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416537.2
CDS-3UTR CCA 90 bp CTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCGCCTCACAGGAAAGCTaGTCAGAATCTGGAAGATGG +
Preference number: 4 (lower is better)
Translates to: LPPGLASGLGIPSASITSASQES*SESGRW
Trigger: CCATCTTCCAGATTCTGACCAGCTTTCCTGTGAGGC...GCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp CTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCCTTTTTCTCTGCTGCTaGCGGTTCCCTGATGCTATC +
Preference number: 4 (lower is better)
Translates to: LPPGLASGLGIPSASITSLFLCC*RFPDAI
Trigger: GATAGCATCAGGGAACCGCCAGCAGCAGAGAAAAAG...GCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp CCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCCTTTAGGGAACTCTCTCTCTaGAGTTCTGGCAGGGAGTCT +
Preference number: 4 (lower is better)
Translates to: PLVWLQVLAYQVLVLPAFRELSL*SSGRES
Trigger: AGACTCCCTGCCAGAACTCCAGAGAGAGAGTTCCCT...AAAGGCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp CCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTTTCCATAAGGGTGGTTaGAGGTGTGCTATGAACAGG +
Preference number: 4 (lower is better)
Translates to: PHLPPGLASGLGIPSASIFHKGG*RCAMNR
Trigger: CCTGTTCATAGCACACCTCCAACCACCCTTATGGAA...AATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp CCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTAAGCCGAGGAATTCCTaGAATGCTCAGTATCCTTCC +
Preference number: 4 (lower is better)
Translates to: PHLPPGLASGLGIPSASIKPRNS*NAQYPS
Trigger: GGAAGGATACTGAGCATTCCAGGAATTCCTCGGCTT...AATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp CCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCCTTTGCTCCATGCAGGTCTTaGGGTAAGTTACAAGCTGGG +
Preference number: 4 (lower is better)
Translates to: PLVWLQVLAYQVLVLPAFAPCRS*GKLQAG
Trigger: CCCAGCTTGTAACTTACCCCAAGACCTGCATGGAGC...AAAGGCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp CCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCCTTTTCGGCACGTTACTCCCTTaGGTAGACCAGGATGAGTGC +
Preference number: 4 (lower is better)
Translates to: PGLASGLGIPSASITSLFGTLLP*VDQDEC
Trigger: GCACTCATCCTGGTCTACCCAAGGGAGTAACGTGCC...GAAAAGGCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp CCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCCTTTTCCTCCATGTGTACACATaGCCCTTGGGATGGGACCTG +
Preference number: 4 (lower is better)
Translates to: PGLASGLGIPSASITSLFLHVYT*PLGWDL
Trigger: CAGGTCCCATCCCAAGGGCCATGTGTACACATGGAG...GAAAAGGCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR TCA 90 bp ATTCATACCAATGACCTCACATGTGGTGTCAGCAGTCATTCATCCAGCTGTACACTGCTGGCGGTTCCCTaGTGCTATCTTGTGCCTCAC +
Preference number: 4 (lower is better)
Translates to: IHTNDLTCGVSSHSSSCTLLAVP*CYLVPH
Trigger: GTGAGGCACAAGATAGCATCAGGGAACCGCCAGCAG...TGTACAGCTGGATGAATGACTGCTGACACCACATGTGAGGTCATTGGTATGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416537.2
CDS-3UTR TCA 90 bp TTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCCCCTGTGGTTTCCAAATaGGTCTCATATCCAGGGAGA +
Preference number: 4 (lower is better)
Translates to: FPLVWLQVLAYQVLVLPAPVVSK*VSYPGR
Trigger: TCTCCCTGGATATGAGACTCATTTGGAAACCACAGG...GGCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR TCA 90 bp CCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCCTTTTCCTTCCATGTAGCTTCTaGTGTAGCGAGGCATTCCCC +
Preference number: 4 (lower is better)
Translates to: PGLASGLGIPSASITSLFLPCSF*CSEAFP
Trigger: GGGGAATGCCTCGCTACATCAGAAGCTACATGGAAG...GAAAAGGCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR TCA 90 bp CTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCTTGGGTAGACCAGGATaGGTGCGTTCAATCTTCACA +
Preference number: 4 (lower is better)
Translates to: LPPGLASGLGIPSASITSLGRPG*VRSIFT
Trigger: TGTGAAGATTGAACGCACTCATCCTGGTCTACCCAA...GCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR GCA 90 bp CCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCCTTTTCTGGCTTTTTCTCTGCTaGTGGCGGTTCCCTGATGCT +
Preference number: 4 (lower is better)
Translates to: PGLASGLGIPSASITSLFWLFLC*WRFPDA
Trigger: AGCATCAGGGAACCGCCAGCAGCAGAGAAAAAGCCA...GAAAAGGCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR GCA 90 bp TTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCCACCTTTGGGGAAATGTaGTTACAGGGGCCTCTACTA +
Preference number: 4 (lower is better)
Translates to: FPLVWLQVLAYQVLVLPATFGEM*LQGPLL
Trigger: TAGTAGAGGCCCCTGTAAGCACATTTCCCCAAAGGT...GGCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp CCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCCTTTAGAACATGGCTTCAGTaGATCCAGAGATGCCTCGTC +
Preference number: 4 (lower is better)
Translates to: PLVWLQVLAYQVLVLPAFRTWLQ*IQRCLV
Trigger: GACGAGGCATCTCTGGATCCACTGAAGCCATGTTCT...AAAGGCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp CCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTTTTGGTAGGAGAACATaGCTTCAGTGGATCCAGAGA +
Preference number: 4 (lower is better)
Translates to: PHLPPGLASGLGIPSASIFGRRT*LQWIQR
Trigger: TCTCTGGATCCACTGAAGCCATGTTCTCCTACCAAA...AATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp CCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCCTTTGCCTCACAGGAAAGCTaGTCAGAATCTGGAAGATGG +
Preference number: 4 (lower is better)
Translates to: PLVWLQVLAYQVLVLPAFASQES*SESGRW
Trigger: CCATCTTCCAGATTCTGACCAGCTTTCCTGTGAGGC...AAAGGCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp CCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCCTTTCTTTTTCTCTGCTGCTaGCGGTTCCCTGATGCTATC +
Preference number: 4 (lower is better)
Translates to: PLVWLQVLAYQVLVLPAFLFLCC*RFPDAI
Trigger: GATAGCATCAGGGAACCGCCAGCAGCAGAGAAAAAG...AAAGGCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp CCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCCTTTATAGTATGGGCCCCATaGGTAGAAAACTGGGCTGAG +
Preference number: 4 (lower is better)
Translates to: PLVWLQVLAYQVLVLPAFIVWAP*VENWAE
Trigger: CTCAGCCCAGTTTTCTACCCATGGGGCCCATACTAT...AAAGGCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp CCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCCTTTTCGATAAAACTCCCTTGTaGTCCACAGGGAAGGGCCTC +
Preference number: 4 (lower is better)
Translates to: PGLASGLGIPSASITSLFDKTPL*STGKGL
Trigger: GAGGCCCTTCCCTGTGGACCACAAGGGAGTTTTATC...GAAAAGGCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp CTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCACTGGGGCTTATATCTaGATGGATCTTCCAGGGAAC +
Preference number: 4 (lower is better)
Translates to: LPPGLASGLGIPSASITSTGAYI*MDLPGN
Trigger: GTTCCCTGGAAGATCCATCCAGATATAAGCCCCAGT...GCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp CCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTAGGATTGATTCTGTGTaGTTCCATAAGGGTGGTTGG +
Preference number: 4 (lower is better)
Translates to: PHLPPGLASGLGIPSASIRIDSV*FHKGGW
Trigger: CCAACCACCCTTATGGAACCACACAGAATCAATCCT...AATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp CCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCCTTTTCGCTCCATGCAGGTCTTaGGGTAAGTTACAAGCTGGG +
Preference number: 4 (lower is better)
Translates to: PGLASGLGIPSASITSLFAPCRS*GKLQAG
Trigger: CCCAGCTTGTAACTTACCCCAAGACCTGCATGGAGC...GAAAAGGCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp CCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCCTTTTCGTGGGTAGGGGTCGATaGTTATCCAGGCATTTGGCT +
Preference number: 4 (lower is better)
Translates to: PGLASGLGIPSASITSLFVGRGR*LSRHLA
Trigger: AGCCAAATGCCTGGATAACCATCGACCCCTACCCAC...GAAAAGGCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR TCA 90 bp TCTAATTCAGCTAGTTTATTAGAATTTCCATTTCTTGTCTCCACATCCCCACCTGGAGGTGGAAGCAGCTaGGGATCGGGGGCCATCCCT +
Preference number: 4 (lower is better)
Translates to: SNSASLLEFPFLVSTSPPGGGSS*GSGAIP
Trigger: AGGGATGGCCCCCGATCCTCAGCTGCTTCCACCTCC...AGGTGGGGATGTGGAGACAAGAAATGGAAATTCTAATAAACTAGCTGAATTAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR TCA 90 bp CCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCCTTTAACTTTTCTGGGTTCTaGCAGAGAAGCTGGGGATTG +
Preference number: 4 (lower is better)
Translates to: PLVWLQVLAYQVLVLPAFNFSGF*QRSWGL
Trigger: CAATCCCCAGCTTCTCTGTCAGAACCCAGAAAAGTT...AAAGGCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR TCA 90 bp CCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCCTTTGTCCTTTCTCTTGCCTaGGACCAGAACCTTAGAGTT +
Preference number: 4 (lower is better)
Translates to: PLVWLQVLAYQVLVLPAFVLSLA*DQNLRV
Trigger: AACTCTAAGGTTCTGGTCTCAGGCAAGAGAAAGGAC...AAAGGCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR TCA 90 bp CCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCCTTTCAGCCTTTTCTCTACTaGCTAGATTTGGTGGGTAGG +
Preference number: 4 (lower is better)
Translates to: PLVWLQVLAYQVLVLPAFQPFLY*LDLVGR
Trigger: CCTACCCACCAAATCTAGTCAGTAGAGAAAAGGCTG...AAAGGCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR TCA 90 bp GGTTCCCTGATGCTATCTTGTGCCTCACAGGAAAGCTGGTCAGAATCTGGAAGACCACATTCATACCAATaGCCTCACATGTGGTGTCAG +
Preference number: 4 (lower is better)
Translates to: GSLMLSCASQESWSESGRPHSYQ*PHMWCQ
Trigger: CTGACACCACATGTGAGGTCATTGGTATGAATGTGG...TCTTCCAGATTCTGACCAGCTTTCCTGTGAGGCACAAGATAGCATCAGGGAACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416537.2
CDS-3UTR GCA 90 bp CCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCCTTTTCGGTAGTTCCTTGCCTTaGACCATATTCCCAGAGCAC +
Preference number: 4 (lower is better)
Translates to: PGLASGLGIPSASITSLFGSSLP*TIFPEH
Trigger: GTGCTCTGGGAATATGGTGCAAGGCAAGGAACTACC...GAAAAGGCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312292.6
ENST00000421362.6
CDS-3UTR GCA 90 bp CCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCCTTTTCGTCTGGGGAATCAGATaGCCAGAGGTTCTCTTTCTG +
Preference number: 4 (lower is better)
Translates to: PGLASGLGIPSASITSLFVWGIR*PEVLFL
Trigger: CAGAAAGAGAACCTCTGGGCATCTGATTCCCCAGAC...GAAAAGGCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR GCA 90 bp TTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCCATAGTTGCTTTGGTCTaGGATAGGCTCACTTACGTG +
Preference number: 4 (lower is better)
Translates to: FPLVWLQVLAYQVLVLPAIVALV*DRLTYV
Trigger: CACGTAAGTGAGCCTATCGCAGACCAAAGCAACTAT...GGCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR GCA 90 bp TTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCCGTAGACCAGGATGAGTaGGTTCAATCTTCACAGCTT +
Preference number: 4 (lower is better)
Translates to: FPLVWLQVLAYQVLVLPAVDQDE*VQSSQL
Trigger: AAGCTGTGAAGATTGAACGCACTCATCCTGGTCTAC...GGCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR GCA 90 bp CCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCCTTTTCCAGGCTGAGGTACTGTaGGCTGAACTTCTTGAGGAT +
Preference number: 4 (lower is better)
Translates to: PGLASGLGIPSASITSLFQAEVL*AELLED
Trigger: ATCCTCAAGAAGTTCAGCGCACAGTACCTCAGCCTG...GAAAAGGCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR GCA 90 bp CTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCTTGGCTAACACCTTTTaGAAACCCCTGGTAAGGGAA +
Preference number: 4 (lower is better)
Translates to: LPPGLASGLGIPSASITSLANTF*KPLVRE
Trigger: TTCCCTTACCAGGGGTTTGCAAAAGGTGTTAGCCAA...GCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp CTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCCATGACTGTTTGCTCTaGTATCCCTATAGCCTTGAG +
Preference number: 4 (lower is better)
Translates to: LPPGLASGLGIPSASITSHDCLL*YPYSLE
Trigger: CTCAAGGCTATAGGGATACCAGAGCAAACAGTCATG...GCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp TTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCCAGATCTTCCATAGTATaGGCCCCATGGGTAGAAAAC +
Preference number: 4 (lower is better)
Translates to: FPLVWLQVLAYQVLVLPARSSIV*APWVEN
Trigger: GTTTTCTACCCATGGGGCCCATACTATGGAAGATCT...GGCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp CCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCCTTTGGAGGCTCAAAAGCTTaGGGCATCTTTTTGTGTCCT +
Preference number: 4 (lower is better)
Translates to: PLVWLQVLAYQVLVLPAFGGSKA*GIFLCP
Trigger: AGGACACAAAAAGATGCCCCAAGCTTTTGAGCCTCC...AAAGGCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp CCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCCTTTGGGCTTATATCTGGATaGATCTTCCAGGGAACTCTC +
Preference number: 4 (lower is better)
Translates to: PLVWLQVLAYQVLVLPAFGLISG*IFQGTL
Trigger: GAGAGTTCCCTGGAAGATCCATCCAGATATAAGCCC...AAAGGCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp CCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCCTTTAAGCCGAGGAATTCCTaGAATGCTCAGTATCCTTCC +
Preference number: 4 (lower is better)
Translates to: PLVWLQVLAYQVLVLPAFKPRNS*NAQYPS
Trigger: GGAAGGATACTGAGCATTCCAGGAATTCCTCGGCTT...AAAGGCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR TCA 90 bp CCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCCTTTTCCCTGTGGTTTCCAAATaGGTCTCATATCCAGGGAGA +
Preference number: 4 (lower is better)
Translates to: PGLASGLGIPSASITSLFPVVSK*VSYPGR
Trigger: TCTCCCTGGATATGAGACTCATTTGGAAACCACAGG...GAAAAGGCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR TCA 90 bp CCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCCTTTTCTCCCCTACAATAGACTaGGAATCAGACAAGACTCCC +
Preference number: 4 (lower is better)
Translates to: PGLASGLGIPSASITSLFSPTID*ESDKTP
Trigger: GGGAGTCTTGTCTGATTCTCAGTCTATTGTAGGGGA...GAAAAGGCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR TCA 90 bp CCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCCTTTTCTTGGGTAGACCAGGATaGGTGCGTTCAATCTTCACA +
Preference number: 4 (lower is better)
Translates to: PGLASGLGIPSASITSLFLGRPG*VRSIFT
Trigger: TGTGAAGATTGAACGCACTCATCCTGGTCTACCCAA...GAAAAGGCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR GCA 90 bp TTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCCGAGGAATTCCTGGAATaGTCAGTATCCTTCCATGTA +
Preference number: 4 (lower is better)
Translates to: FPLVWLQVLAYQVLVLPAEEFLE*SVSFHV
Trigger: TACATGGAAGGATACTGAGCATTCCAGGAATTCCTC...GGCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR GCA 90 bp TCTAATTCAGCTAGTTTATTAGAATTTCCATTTCTTGTCTCCACATCCCCACCTTCTGAGCAGCTCCGGTaGAAGAGCTGGGGGTGGGCT +
Preference number: 4 (lower is better)
Translates to: SNSASLLEFPFLVSTSPPSEQLR*KSWGWA
Trigger: AGCCCACCCCCAGCTCTTGCACCGGAGCTGCTCAGA...AGGTGGGGATGTGGAGACAAGAAATGGAAATTCTAATAAACTAGCTGAATTAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR GCA 90 bp TCTAATTCAGCTAGTTTATTAGAATTTCCATTTCTTGTCTCCACATCCCCACCTGGAGAGTGGGGCCTCTaGCTTAACCCCTGGGCACGT +
Preference number: 4 (lower is better)
Translates to: SNSASLLEFPFLVSTSPPGEWGL*LNPWAR
Trigger: ACGTGCCCAGGGGTTAAGGCAGAGGCCCCACTCTCC...AGGTGGGGATGTGGAGACAAGAAATGGAAATTCTAATAAACTAGCTGAATTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR GCA 90 bp CCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCCTTTTCTCTTCTATGGTCTCCTaGTTTGGGTTTCCTAGGGTG +
Preference number: 4 (lower is better)
Translates to: PGLASGLGIPSASITSLFSSMVS*FGFPRV
Trigger: CACCCTAGGAAACCCAAAGCAGGAGACCATAGAAGA...GAAAAGGCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR GCA 90 bp CCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCCTTTTCACCTTTGGGGAAATGTaGTTACAGGGGCCTCTACTA +
Preference number: 4 (lower is better)
Translates to: PGLASGLGIPSASITSLFTFGEM*LQGPLL
Trigger: TAGTAGAGGCCCCTGTAAGCACATTTCCCCAAAGGT...GAAAAGGCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp TCTAATTCAGCTAGTTTATTAGAATTTCCATTTCTTGTCTCCACATCCCCACCTACAGGATGGCTGGGGTaGGGCTGGAGTGGCTTGCTC +
Preference number: 4 (lower is better)
Translates to: SNSASLLEFPFLVSTSPPTGWLG*GWSGLL
Trigger: GAGCAAGCCACTCCAGCCCCACCCCAGCCATCCTGT...AGGTGGGGATGTGGAGACAAGAAATGGAAATTCTAATAAACTAGCTGAATTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp CCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCCTTTAGGATTGATTCTGTGTaGTTCCATAAGGGTGGTTGG +
Preference number: 4 (lower is better)
Translates to: PLVWLQVLAYQVLVLPAFRIDSV*FHKGGW
Trigger: CCAACCACCCTTATGGAACCACACAGAATCAATCCT...AAAGGCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp CCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTATAGGCTCACTTACGTaGGACTTTGAAACAGAGTTT +
Preference number: 4 (lower is better)
Translates to: PHLPPGLASGLGIPSASIIGSLT*DFETEF
Trigger: AAACTCTGTTTCAAAGTCCCACGTAAGTGAGCCTAT...AATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp CTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCGGTTATCCAGGCATTTaGCTAACACCTTTTGCAAAC +
Preference number: 4 (lower is better)
Translates to: LPPGLASGLGIPSASITSGYPGI*LTPFAN
Trigger: GTTTGCAAAAGGTGTTAGCCAAATGCCTGGATAACC...GCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR GCA 90 bp CCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCCTTTTCTTCCTGAGTTTTCTCTaGATTCCCACTGGGGCTTAT +
Preference number: 4 (lower is better)
Translates to: PGLASGLGIPSASITSLFFLSFL*IPTGAY
Trigger: ATAAGCCCCAGTGGGAATGCAGAGAAAACTCAGGAA...GAAAAGGCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp TCTAATTCAGCTAGTTTATTAGAATTTCCATTTCTTGTCTCCACATCCCCACCTCTGCAGGCTAGGGCATaGGTCAGTTGGCCCCAGAGA +
Preference number: 4 (lower is better)
Translates to: SNSASLLEFPFLVSTSPPLQARA*VSWPQR
Trigger: TCTCTGGGGCCAACTGACCCATGCCCTAGCCTGCAG...AGGTGGGGATGTGGAGACAAGAAATGGAAATTCTAATAAACTAGCTGAATTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312292.6
CDS-3UTR CCA 90 bp TTCCCTGATGCTATCTTGTGCCTCACAGGAAAGCTGGTCAGAATCTGGAAGATGCATGACTGTTTGCTCTaGTATCCCTATAGCCTTGAG +
Preference number: 4 (lower is better)
Translates to: FPDAILCLTGKLVRIWKMHDCLL*YPYSLE
Trigger: CTCAAGGCTATAGGGATACCAGAGCAAACAGTCATG...CATCTTCCAGATTCTGACCAGCTTTCCTGTGAGGCACAAGATAGCATCAGGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416537.2
CDS-3UTR CCA 90 bp CCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCCTTTTCCATGACTGTTTGCTCTaGTATCCCTATAGCCTTGAG +
Preference number: 4 (lower is better)
Translates to: PGLASGLGIPSASITSLFHDCLL*YPYSLE
Trigger: CTCAAGGCTATAGGGATACCAGAGCAAACAGTCATG...GAAAAGGCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp ATTCATACCAATGACCTCACATGTGGTGTCAGCAGTCATTCATCCAGCTGTACACTTTTTCTCTGCTGCTaGCGGTTCCCTGATGCTATC +
Preference number: 4 (lower is better)
Translates to: IHTNDLTCGVSSHSSSCTLFLCC*RFPDAI
Trigger: GATAGCATCAGGGAACCGCCAGCAGCAGAGAAAAAG...TGTACAGCTGGATGAATGACTGCTGACACCACATGTGAGGTCATTGGTATGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416537.2
CDS-3UTR CCA 90 bp TTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCCATAGGCTCACTTACGTaGGACTTTGAAACAGAGTTT +
Preference number: 4 (lower is better)
Translates to: FPLVWLQVLAYQVLVLPAIGSLT*DFETEF
Trigger: AAACTCTGTTTCAAAGTCCCACGTAAGTGAGCCTAT...GGCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp TCTAATTCAGCTAGTTTATTAGAATTTCCATTTCTTGTCTCCACATCCCCACCTGGGGACCCGAAGCTTTaGGGAGAAGCAGCTGGGGAA +
Preference number: 4 (lower is better)
Translates to: SNSASLLEFPFLVSTSPPGDPKL*GEAAGE
Trigger: TTCCCCAGCTGCTTCTCCCCAAAGCTTCGGGTCCCC...AGGTGGGGATGTGGAGACAAGAAATGGAAATTCTAATAAACTAGCTGAATTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR GCA 90 bp TCTAATTCAGCTAGTTTATTAGAATTTCCATTTCTTGTCTCCACATCCCCACCTGGGTGGTTGGAGGTGTaGTATGAACAGGGTCTGGGG +
Preference number: 4 (lower is better)
Translates to: SNSASLLEFPFLVSTSPPGWLEV*YEQGLG
Trigger: CCCCAGACCCTGTTCATAGCACACCTCCAACCACCC...AGGTGGGGATGTGGAGACAAGAAATGGAAATTCTAATAAACTAGCTGAATTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp TCTAATTCAGCTAGTTTATTAGAATTTCCATTTCTTGTCTCCACATCCCCACCTGCTGAGGGCCAGAGATaGAGACCTAGAAGCCGAGGA +
Preference number: 4 (lower is better)
Translates to: SNSASLLEFPFLVSTSPPAEGQR*RPRSRG
Trigger: TCCTCGGCTTCTAGGTCTCCATCTCTGGCCCTCAGC...AGGTGGGGATGTGGAGACAAGAAATGGAAATTCTAATAAACTAGCTGAATTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp TCTAATTCAGCTAGTTTATTAGAATTTCCATTTCTTGTCTCCACATCCCCACCTCTCTGCCTTAACCCCTaGGCACGTTACTCCCTTGGG +
Preference number: 4 (lower is better)
Translates to: SNSASLLEFPFLVSTSPPLCLNP*ARYSLG
Trigger: CCCAAGGGAGTAACGTGCCCAGGGGTTAAGGCAGAG...AGGTGGGGATGTGGAGACAAGAAATGGAAATTCTAATAAACTAGCTGAATTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp TCTAATTCAGCTAGTTTATTAGAATTTCCATTTCTTGTCTCCACATCCCCACCTCCTCTACTAGGCTTCTaGCCTGGGCAGGGTGGTTCT +
Preference number: 4 (lower is better)
Translates to: SNSASLLEFPFLVSTSPPPLLGF*PGQGGS
Trigger: AGAACCACCCTGCCCAGGCCAGAAGCCTAGTAGAGG...AGGTGGGGATGTGGAGACAAGAAATGGAAATTCTAATAAACTAGCTGAATTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp CCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCCTTTTCGGTTATCCAGGCATTTaGCTAACACCTTTTGCAAAC +
Preference number: 4 (lower is better)
Translates to: PGLASGLGIPSASITSLFGYPGI*LTPFAN
Trigger: GTTTGCAAAAGGTGTTAGCCAAATGCCTGGATAACC...GAAAAGGCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR TCA 90 bp TCTAATTCAGCTAGTTTATTAGAATTTCCATTTCTTGTCTCCACATCCCCACCTCAGAGAGCTCTGGGTTaGGGTCCAAGACTGGAGACT +
Preference number: 4 (lower is better)
Translates to: SNSASLLEFPFLVSTSPPQRALG*GPRLET
Trigger: AGTCTCCAGTCTTGGACCTCAACCCAGAGCTCTCTG...AGGTGGGGATGTGGAGACAAGAAATGGAAATTCTAATAAACTAGCTGAATTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR TCA 90 bp TCTAATTCAGCTAGTTTATTAGAATTTCCATTTCTTGTCTCCACATCCCCACCTATTTTCTCCCCTCTCTaGGACCCTTGTTCCGCCCTG +
Preference number: 4 (lower is better)
Translates to: SNSASLLEFPFLVSTSPPIFSPL*DPCSAL
Trigger: CAGGGCGGAACAAGGGTCTCAGAGAGGGGAGAAAAT...AGGTGGGGATGTGGAGACAAGAAATGGAAATTCTAATAAACTAGCTGAATTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR TCA 90 bp TCTAATTCAGCTAGTTTATTAGAATTTCCATTTCTTGTCTCCACATCCCCACCTGGTGGTTCTTCCCTGTaGCTGTGGATAACCCCAACC +
Preference number: 4 (lower is better)
Translates to: SNSASLLEFPFLVSTSPPGGSSL*LWITPT
Trigger: GGTTGGGGTTATCCACAGTCACAGGGAAGAACCACC...AGGTGGGGATGTGGAGACAAGAAATGGAAATTCTAATAAACTAGCTGAATTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp CCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCCTTTTCATAGGCTCACTTACGTaGGACTTTGAAACAGAGTTT +
Preference number: 4 (lower is better)
Translates to: PGLASGLGIPSASITSLFIGSLT*DFETEF
Trigger: AAACTCTGTTTCAAAGTCCCACGTAAGTGAGCCTAT...GAAAAGGCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp TCTAATTCAGCTAGTTTATTAGAATTTCCATTTCTTGTCTCCACATCCCCACCTGCATGGATCCCAGGATaGGTGAGCAACTCTGGGACA +
Preference number: 4 (lower is better)
Translates to: SNSASLLEFPFLVSTSPPAWIPG*VSNSGT
Trigger: TGTCCCAGAGTTGCTCACCCATCCTGGGATCCATGC...AGGTGGGGATGTGGAGACAAGAAATGGAAATTCTAATAAACTAGCTGAATTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp TCTAATTCAGCTAGTTTATTAGAATTTCCATTTCTTGTCTCCACATCCCCACCTACATGGCCCTTGGGATaGGACCTGGCTCACCATCTT +
Preference number: 4 (lower is better)
Translates to: SNSASLLEFPFLVSTSPPTWPLG*DLAHHL
Trigger: AAGATGGTGAGCCAGGTCCCATCCCAAGGGCCATGT...AGGTGGGGATGTGGAGACAAGAAATGGAAATTCTAATAAACTAGCTGAATTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR GCA 90 bp TCTAATTCAGCTAGTTTATTAGAATTTCCATTTCTTGTCTCCACATCCCCACCTAGGAAGGCCACACGGTaGAGAAGTGGTAGTTCCTTG +
Preference number: 4 (lower is better)
Translates to: SNSASLLEFPFLVSTSPPRKATR*RSGSSL
Trigger: CAAGGAACTACCACTTCTGCACCGTGTGGCCTTCCT...AGGTGGGGATGTGGAGACAAGAAATGGAAATTCTAATAAACTAGCTGAATTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312292.6
ENST00000421362.6
CDS-3UTR GCA 90 bp TCTAATTCAGCTAGTTTATTAGAATTTCCATTTCTTGTCTCCACATCCCCACCTTGGCTTTTTCTCTGCTaGTGGCGGTTCCCTGATGCT +
Preference number: 4 (lower is better)
Translates to: SNSASLLEFPFLVSTSPPWLFLC*WRFPDA
Trigger: AGCATCAGGGAACCGCCAGCAGCAGAGAAAAAGCCA...AGGTGGGGATGTGGAGACAAGAAATGGAAATTCTAATAAACTAGCTGAATTAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR GCA 90 bp TCTAATTCAGCTAGTTTATTAGAATTTCCATTTCTTGTCTCCACATCCCCACCTAGAGGGCTGGCTCCATaGAGGTCTTGGGGTAAGTTA +
Preference number: 4 (lower is better)
Translates to: SNSASLLEFPFLVSTSPPRGLAP*RSWGKL
Trigger: TAACTTACCCCAAGACCTGCATGGAGCCAGCCCTCT...AGGTGGGGATGTGGAGACAAGAAATGGAAATTCTAATAAACTAGCTGAATTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp TCTAATTCAGCTAGTTTATTAGAATTTCCATTTCTTGTCTCCACATCCCCACCTGATAAAACTCCCTTGTaGTCCACAGGGAAGGGCCTC +
Preference number: 4 (lower is better)
Translates to: SNSASLLEFPFLVSTSPPDKTPL*STGKGL
Trigger: GAGGCCCTTCCCTGTGGACCACAAGGGAGTTTTATC...AGGTGGGGATGTGGAGACAAGAAATGGAAATTCTAATAAACTAGCTGAATTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp TCTAATTCAGCTAGTTTATTAGAATTTCCATTTCTTGTCTCCACATCCCCACCTTGTCTCAGATGCTGGTaGGACACATTCAGGGCTGGT +
Preference number: 4 (lower is better)
Translates to: SNSASLLEFPFLVSTSPPCLRCW*DTFRAG
Trigger: ACCAGCCCTGAATGTGTCCCACCAGCATCTGAGACA...AGGTGGGGATGTGGAGACAAGAAATGGAAATTCTAATAAACTAGCTGAATTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp TCTAATTCAGCTAGTTTATTAGAATTTCCATTTCTTGTCTCCACATCCCCACCTGCTATGAACAGGGTCTaGGGAATCAGATGCCCAGAG +
Preference number: 4 (lower is better)
Translates to: SNSASLLEFPFLVSTSPPAMNRV*GIRCPE
Trigger: CTCTGGGCATCTGATTCCCCAGACCCTGTTCATAGC...AGGTGGGGATGTGGAGACAAGAAATGGAAATTCTAATAAACTAGCTGAATTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp TCTAATTCAGCTAGTTTATTAGAATTTCCATTTCTTGTCTCCACATCCCCACCTACCTTCCCCCTGGTTTaGCTTCAGGTCTTGGCATAC +
Preference number: 4 (lower is better)
Translates to: SNSASLLEFPFLVSTSPPTFPLV*LQVLAY
Trigger: GTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGT...AGGTGGGGATGTGGAGACAAGAAATGGAAATTCTAATAAACTAGCTGAATTAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR GCA 90 bp TCTAATTCAGCTAGTTTATTAGAATTTCCATTTCTTGTCTCCACATCCCCACCTGTCTGGGGAATCAGATaGCCAGAGGTTCTCTTTCTG +
Preference number: 4 (lower is better)
Translates to: SNSASLLEFPFLVSTSPPVWGIR*PEVLFL
Trigger: CAGAAAGAGAACCTCTGGGCATCTGATTCCCCAGAC...AGGTGGGGATGTGGAGACAAGAAATGGAAATTCTAATAAACTAGCTGAATTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp TCTAATTCAGCTAGTTTATTAGAATTTCCATTTCTTGTCTCCACATCCCCACCTGCCTCACAGGAAAGCTaGTCAGAATCTGGAAGATGG +
Preference number: 4 (lower is better)
Translates to: SNSASLLEFPFLVSTSPPASQES*SESGRW
Trigger: CCATCTTCCAGATTCTGACCAGCTTTCCTGTGAGGC...AGGTGGGGATGTGGAGACAAGAAATGGAAATTCTAATAAACTAGCTGAATTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR TCA 90 bp TCTAATTCAGCTAGTTTATTAGAATTTCCATTTCTTGTCTCCACATCCCCACCTTTGAGGATGACAACTTaGAGAGTGGGGGCATGGATT +
Preference number: 4 (lower is better)
Translates to: SNSASLLEFPFLVSTSPPLRMTT*RVGAWI
Trigger: AATCCATGCCCCCACTCTTCAAGTTGTCATCCTCAA...AGGTGGGGATGTGGAGACAAGAAATGGAAATTCTAATAAACTAGCTGAATTAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR TCA 90 bp TCTAATTCAGCTAGTTTATTAGAATTTCCATTTCTTGTCTCCACATCCCCACCTGTCCTTTCTCTTGCCTaGGACCAGAACCTTAGAGTT +
Preference number: 4 (lower is better)
Translates to: SNSASLLEFPFLVSTSPPVLSLA*DQNLRV
Trigger: AACTCTAAGGTTCTGGTCTCAGGCAAGAGAAAGGAC...AGGTGGGGATGTGGAGACAAGAAATGGAAATTCTAATAAACTAGCTGAATTAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR TCA 90 bp TCTAATTCAGCTAGTTTATTAGAATTTCCATTTCTTGTCTCCACATCCCCACCTAGCTGCCACCATCTCTaGATCTTTCTCAGCATTCCA +
Preference number: 4 (lower is better)
Translates to: SNSASLLEFPFLVSTSPPSCHHL*IFLSIP
Trigger: TGGAATGCTGAGAAAGATTCAGAGATGGTGGCAGCT...AGGTGGGGATGTGGAGACAAGAAATGGAAATTCTAATAAACTAGCTGAATTAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421362.6
CDS-3UTR GCA 90 bp TCTAATTCAGCTAGTTTATTAGAATTTCCATTTCTTGTCTCCACATCCCCACCTTCTTCTATGGTCTCCTaGTTTGGGTTTCCTAGGGTG +
Preference number: 4 (lower is better)
Translates to: SNSASLLEFPFLVSTSPPSSMVS*FGFPRV
Trigger: CACCCTAGGAAACCCAAAGCAGGAGACCATAGAAGA...AGGTGGGGATGTGGAGACAAGAAATGGAAATTCTAATAAACTAGCTGAATTAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp TCTAATTCAGCTAGTTTATTAGAATTTCCATTTCTTGTCTCCACATCCCCACCTGGAGGCTCAAAAGCTTaGGGCATCTTTTTGTGTCCT +
Preference number: 4 (lower is better)
Translates to: SNSASLLEFPFLVSTSPPGGSKA*GIFLCP
Trigger: AGGACACAAAAAGATGCCCCAAGCTTTTGAGCCTCC...AGGTGGGGATGTGGAGACAAGAAATGGAAATTCTAATAAACTAGCTGAATTAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp TCTAATTCAGCTAGTTTATTAGAATTTCCATTTCTTGTCTCCACATCCCCACCTGGGCTTATATCTGGATaGATCTTCCAGGGAACTCTC +
Preference number: 4 (lower is better)
Translates to: SNSASLLEFPFLVSTSPPGLISG*IFQGTL
Trigger: GAGAGTTCCCTGGAAGATCCATCCAGATATAAGCCC...AGGTGGGGATGTGGAGACAAGAAATGGAAATTCTAATAAACTAGCTGAATTAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp TCTAATTCAGCTAGTTTATTAGAATTTCCATTTCTTGTCTCCACATCCCCACCTGAGTCCCCAGAAGTCTaGAATTGTGGAGCTCAGAAT +
Preference number: 4 (lower is better)
Translates to: SNSASLLEFPFLVSTSPPESPEV*NCGAQN
Trigger: ATTCTGAGCTCCACAATTCCAGACTTCTGGGGACTC...AGGTGGGGATGTGGAGACAAGAAATGGAAATTCTAATAAACTAGCTGAATTAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR GCA 90 bp TCTAATTCAGCTAGTTTATTAGAATTTCCATTTCTTGTCTCCACATCCCCACCTGTAGACCAGGATGAGTaGGTTCAATCTTCACAGCTT +
Preference number: 4 (lower is better)
Translates to: SNSASLLEFPFLVSTSPPVDQDE*VQSSQL
Trigger: AAGCTGTGAAGATTGAACGCACTCATCCTGGTCTAC...AGGTGGGGATGTGGAGACAAGAAATGGAAATTCTAATAAACTAGCTGAATTAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR GCA 90 bp TCTAATTCAGCTAGTTTATTAGAATTTCCATTTCTTGTCTCCACATCCCCACCTTTGGCTAACACCTTTTaGAAACCCCTGGTAAGGGAA +
Preference number: 4 (lower is better)
Translates to: SNSASLLEFPFLVSTSPPLANTF*KPLVRE
Trigger: TTCCCTTACCAGGGGTTTGCAAAAGGTGTTAGCCAA...AGGTGGGGATGTGGAGACAAGAAATGGAAATTCTAATAAACTAGCTGAATTAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp TCTAATTCAGCTAGTTTATTAGAATTTCCATTTCTTGTCTCCACATCCCCACCTTTTGGTAGGAGAACATaGCTTCAGTGGATCCAGAGA +
Preference number: 4 (lower is better)
Translates to: SNSASLLEFPFLVSTSPPFGRRT*LQWIQR
Trigger: TCTCTGGATCCACTGAAGCCATGTTCTCCTACCAAA...AGGTGGGGATGTGGAGACAAGAAATGGAAATTCTAATAAACTAGCTGAATTAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR GCA 90 bp TCTAATTCAGCTAGTTTATTAGAATTTCCATTTCTTGTCTCCACATCCCCACCTGAGGAATTCCTGGAATaGTCAGTATCCTTCCATGTA +
Preference number: 4 (lower is better)
Translates to: SNSASLLEFPFLVSTSPPEEFLE*SVSFHV
Trigger: TACATGGAAGGATACTGAGCATTCCAGGAATTCCTC...AGGTGGGGATGTGGAGACAAGAAATGGAAATTCTAATAAACTAGCTGAATTAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CCA 90 bp TCTAATTCAGCTAGTTTATTAGAATTTCCATTTCTTGTCTCCACATCCCCACCTGGTTATCCAGGCATTTaGCTAACACCTTTTGCAAAC +
Preference number: 4 (lower is better)
Translates to: SNSASLLEFPFLVSTSPPGYPGI*LTPFAN
Trigger: GTTTGCAAAAGGTGTTAGCCAAATGCCTGGATAACC...AGGTGGGGATGTGGAGACAAGAAATGGAAATTCTAATAAACTAGCTGAATTAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS CCA 90 bp CAGGACCCCCATGGATCTAACTCTGAGCAGCTCCGGTGCAAGAGCTaGGGGTGGGCTGAGGGCCAGAGATGGAGACCTAGAAGCCGAGGA +
Preference number: 5 (lower is better)
Translates to: QDPHGSNSEQLRCKS*GWAEGQRWRPRSRG
Trigger: TCCTCGGCTTCTAGGTCTCCATCTCTGGCCCTCAGCCCACCCCCAGCTCTTGCACCGGAGCTGCTCAGAGTTAGATCCATGGGGGTCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS TCA 90 bp GGCCAGGGGCTCTGGAGGCAGGGCTCTGCCGCAGTTTCTTCAGCCTaGGTTTCAGCTCTCTACTCCACTGCCAGGCATGGATCCCAGGAT +
Preference number: 5 (lower is better)
Translates to: GQGLWRQGSAAVSSA*VSALYSTARHGSQD
Trigger: ATCCTGGGATCCATGCCTGGCAGTGGAGTAGAGAGCTGAAACTCAGGCTGAAGAAACTGCGGCAGAGCCCTGCCTCCAGAGCCCCTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS GCA 90 bp GGCCCAAGGACAGTGCTTACAGTGGCGAGGGGTCAGGATGTCACTTaGTCTTCGCCCTGCCTCTGGCTGATCCTGGGGACCCGAAGCTTT +
Preference number: 5 (lower is better)
Translates to: GPRTVLTVARGQDVT*SSPCLWLILGTRSF
Trigger: AAAGCTTCGGGTCCCCAGGATCAGCCAGAGGCAGGGCGAAGAGCAAGTGACATCCTGACCCCTCGCCACTGTAAGCACTGTCCTTGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS GCA 90 bp GGTGCAGAAGTGGTAGTTCCAGATTTCCTGGACTCTGGAAGCAGCTaGTGCCGCAGTGTCTGCAGGCTAGGGCATGGGTCAGTTGGCCCC +
Preference number: 5 (lower is better)
Translates to: GAEVVVPDFLDSGSS*CRSVCRLGHGSVGP
Trigger: GGGGCCAACTGACCCATGCCCTAGCCTGCAGACACTGCGGCAGCAGCTGCTTCCAGAGTCCAGGAAATCTGGAACTACCACTTCTGCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378745.3
CDS CCA 90 bp CCCCATGGATCTAACTCTGAGCAGCTCCGGTGCAAGAGCTGGGGGTaGGCTGAGGGCCAGAGATGGAGACCTAGAAGCCGAGGAATTCCT +
Preference number: 5 (lower is better)
Translates to: PHGSNSEQLRCKSWG*AEGQRWRPRSRGIP
Trigger: AGGAATTCCTCGGCTTCTAGGTCTCCATCTCTGGCCCTCAGCCCACCCCCAGCTCTTGCACCGGAGCTGCTCAGAGTTAGATCCATGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS TCA 90 bp GTTTCAGCTCTCTACTCCACTGCCAGGCATGGATCCCAGGATGGGTaGGCAACTCTGGGACAGTCCATCTCTGGGAGAGTGGGGCCTCTG +
Preference number: 5 (lower is better)
Translates to: VSALYSTARHGSQDG*ATLGQSISGRVGPL
Trigger: CAGAGGCCCCACTCTCCCAGAGATGGACTGTCCCAGAGTTGCTCACCCATCCTGGGATCCATGCCTGGCAGTGGAGTAGAGAGCTGAAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS GCA 90 bp TCACCAGATTTCCTGGACTCTGGAAGCAGCTGCTGCCGCAGTGTCTaGAGGCTAGGGCATGGGTCAGTTGGCCCCAGAGAAGCCCCATAT +
Preference number: 5 (lower is better)
Translates to: SPDFLDSGSSCCRSV*RLGHGSVGPREAPY
Trigger: ATATGGGGCTTCTCTGGGGCCAACTGACCCATGCCCTAGCCTGCAGACACTGCGGCAGCAGCTGCTTCCAGAGTCCAGGAAATCTGGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312292.6
CDS GCA 90 bp AGAATCAGACAGGACCCCCATGGATCTAACTCTGAGCAGCTCCGGTaGAAGAGCTGGGGGTGGGCTGAGGGCCAGAGATGGAGACCTAGA +
Preference number: 5 (lower is better)
Translates to: RIRQDPHGSNSEQLR*KSWGWAEGQRWRPR
Trigger: TCTAGGTCTCCATCTCTGGCCCTCAGCCCACCCCCAGCTCTTGCACCGGAGCTGCTCAGAGTTAGATCCATGGGGGTCCTGTCTGATTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS GCA 90 bp GTTCCAGATTTCCTGGACTCTGGAAGCAGCTGCTGCCGCAGTGTCTaGAGGCTAGGGCATGGGTCAGTTGGCCCCAGAGAAGCCCCATAT +
Preference number: 5 (lower is better)
Translates to: VPDFLDSGSSCCRSV*RLGHGSVGPREAPY
Trigger: ATATGGGGCTTCTCTGGGGCCAACTGACCCATGCCCTAGCCTGCAGACACTGCGGCAGCAGCTGCTTCCAGAGTCCAGGAAATCTGGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378745.3
CDS GCA 90 bp GCAGAAGTGGTAGTTCCAGATTTCCTGGACTCTGGAAGCAGCTGCTaGCGCAGTGTCTGCAGGCTAGGGCATGGGTCAGTTGGCCCCAGA +
Preference number: 5 (lower is better)
Translates to: AEVVVPDFLDSGSSC*RSVCRLGHGSVGPR
Trigger: TCTGGGGCCAACTGACCCATGCCCTAGCCTGCAGACACTGCGGCAGCAGCTGCTTCCAGAGTCCAGGAAATCTGGAACTACCACTTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378745.3
CDS CCA 90 bp GAGCAGCTCCGGTGCAAGAGCTGGGGGTGGGCTGAGGGCCAGAGATaGAGACCTAGAAGCCGAGGAATTCCTGGAATGCTCAGTATCCTT +
Preference number: 5 (lower is better)
Translates to: EQLRCKSWGWAEGQR*RPRSRGIPGMLSIL
Trigger: AAGGATACTGAGCATTCCAGGAATTCCTCGGCTTCTAGGTCTCCATCTCTGGCCCTCAGCCCACCCCCAGCTCTTGCACCGGAGCTGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS CCA 90 bp GTAGACCAGGATGAGTGCGTTCAATCTTCACAGCTTCAGCTAGGGTaGGAGGCTGGGGTACTGGGTGTAGGGGATCCACTGCCAGAGGGC +
Preference number: 5 (lower is better)
Translates to: VDQDECVQSSQLQLG*EAGVLGVGDPLPEG
Trigger: GCCCTCTGGCAGTGGATCCCCTACACCCAGTACCCCAGCCTCCCACCCTAGCTGAAGCTGTGAAGATTGAACGCACTCATCCTGGTCTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CAA 90 bp GTCTCCACATCCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGGTGTACACATGGCCCTaGGGATGGGACCTGGCTCAC +
Preference number: 5 (lower is better)
Translates to: VSTSPPSPWFGFRSWHTKVYTWP*GWDLAH
Trigger: GTGAGCCAGGTCCCATCCCAAGGGCCATGTGTACAC...CTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGGATGTGGAGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CAA 90 bp TCCACATCCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCGTGTACACATGGCCCTaGGGATGGGACCTGGCTCAC +
Preference number: 5 (lower is better)
Translates to: STSPPSPWFGFRSWHTKCVYTWP*GWDLAH
Trigger: GTGAGCCAGGTCCCATCCCAAGGGCCATGTGTACAC...GCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGGATGTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CAA 90 bp CTCCACATCCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGGGGAAGAGCAGTGTGTaGAGAGCTCTGGCCCCTGTG +
Preference number: 5 (lower is better)
Translates to: LHIPTFPLVWLQVLAYQVGKSSV*RALAPV
Trigger: CACAGGGGCCAGAGCTCTCAACACACTGCTCTTCCC...CACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGGATGTGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CAA 90 bp CTCCACATCCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGGGGTCAGGATGTCACTaGCTCTTCGCCCTGCCTCTG +
Preference number: 5 (lower is better)
Translates to: LHIPTFPLVWLQVLAYQVGSGCH*LFALPL
Trigger: CAGAGGCAGGGCGAAGAGCAAGTGACATCCTGACCC...CACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGGATGTGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CAA 90 bp CCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTTGGGGCTGGAGTGGCTaGCTCTCCAGTGGGAGCTTC +
Preference number: 5 (lower is better)
Translates to: PHLPPGLASGLGIPSASIWGWSG*LSSGSF
Trigger: GAAGCTCCCACTGGAGAGCAAGCCACTCCAGCCCCA...AATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CAA 90 bp CCAGTGGGAGCTTCTTTGGTAGGAGAACATGGCTTCAGTGGATCCAGAGATGCCTGGGGCTGGAGTGGCTaGCTCTCCAGTGGGAGCTTC +
Preference number: 5 (lower is better)
Translates to: PVGASLVGEHGFSGSRDAWGWSG*LSSGSF
Trigger: GAAGCTCCCACTGGAGAGCAAGCCACTCCAGCCCCA...GGCATCTCTGGATCCACTGAAGCCATGTTCTCCTACCAAAGAAGCTCCCACTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416537.2
CDS-3UTR CAA 90 bp GTCTCCACATCCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGGGCAAGGGACTGGCATaGAAGACTCAGAGGCCTGAG +
Preference number: 5 (lower is better)
Translates to: VSTSPPSPWFGFRSWHTKGKGLA*KTQRPE
Trigger: CTCAGGCCTCTGAGTCTTCAATGCCAGTCCCTTGCC...CTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGGATGTGGAGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CAA 90 bp CTCCACATCCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCCAGTGGTTCTTTCTTaGCTCCACTGCCTCCCCGTC +
Preference number: 5 (lower is better)
Translates to: LHIPTFPLVWLQVLAYQVPVVLS*LHCLPV
Trigger: GACGGGGAGGCAGTGGAGCAAAGAAAGAACCACTGG...CACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGGATGTGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS TCA 90 bp TCTGCCTTAACCCCTGGGCACGTTACTCCCTTGGGTAGACCAGGATaGGTGCGTTCAATCTTCACAGCTTCAGCTAGGGTGGGAGGCTGG +
Preference number: 5 (lower is better)
Translates to: SALTPGHVTPLGRPG*VRSIFTASARVGGW
Trigger: CCAGCCTCCCACCCTAGCTGAAGCTGTGAAGATTGAACGCACTCATCCTGGTCTACCCAAGGGAGTAACGTGCCCAGGGGTTAAGGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS GCA 90 bp CGAATAAGAATAGTGTCACCAGATTTCCTGGACTCTGGAAGCAGCTaGTGCCGCAGTGTCTGCAGGCTAGGGCATGGGTCAGTTGGCCCC +
Preference number: 5 (lower is better)
Translates to: RIRIVSPDFLDSGSS*CRSVCRLGHGSVGP
Trigger: GGGGCCAACTGACCCATGCCCTAGCCTGCAGACACTGCGGCAGCAGCTGCTTCCAGAGTCCAGGAAATCTGGTGACACTATTCTTATTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312292.6
CDS GCA 90 bp CTCTGCCGCAGTTTCTTCAGCCTGAGTTTCAGCTCTCTACTCCACTaGCAGGCATGGATCCCAGGATGGGTGAGCAACTCTGGGACAGTC +
Preference number: 5 (lower is better)
Translates to: LCRSFFSLSFSSLLH*QAWIPGWVSNSGTV
Trigger: GACTGTCCCAGAGTTGCTCACCCATCCTGGGATCCATGCCTGGCAGTGGAGTAGAGAGCTGAAACTCAGGCTGAAGAAACTGCGGCAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS GCA 90 bp AGGGTAGGGAAGGAGAGATACTTCTCCATGTGGGCCCAAGGACAGTaGTTACAGTGGCGAGGGGTCAGGATGTCACTTGCTCTTCGCCCT +
Preference number: 5 (lower is better)
Translates to: RVGKERYFSMWAQGQ*LQWRGVRMSLALRP
Trigger: AGGGCGAAGAGCAAGTGACATCCTGACCCCTCGCCACTGTAAGCACTGTCCTTGGGCCCACATGGAGAAGTATCTCTCCTTCCCTACCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CAA 90 bp CTCCACATCCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCCAGATAAAACTCCCTaGTGGTCCACAGGGAAGGGC +
Preference number: 5 (lower is better)
Translates to: LHIPTFPLVWLQVLAYQVPDKTP*WSTGKG
Trigger: GCCCTTCCCTGTGGACCACAAGGGAGTTTTATCTGG...CACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGGATGTGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CAA 90 bp GTCTCCACATCCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCAAAATGATTGACTaGGGCCAGGGGCTCTGGAGG +
Preference number: 5 (lower is better)
Translates to: VSTSPPSPWFGFRSWHTKCKMID*GQGLWR
Trigger: CCTCCAGAGCCCCTGGCCCAAGTCAATCATTTTGCA...CTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGGATGTGGAGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CAA 90 bp CTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCCCCTCTCTGAGACCCTaGTTCCGCCCTGCCAGACTC +
Preference number: 5 (lower is better)
Translates to: LPPGLASGLGIPSASITSPSLRP*FRPARL
Trigger: GAGTCTGGCAGGGCGGAACAAGGGTCTCAGAGAGGG...GCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CAA 90 bp CCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTGGGAAGAGCAGTGTGTaGAGAGCTCTGGCCCCTGTG +
Preference number: 5 (lower is better)
Translates to: PHLPPGLASGLGIPSASIGKSSV*RALAPV
Trigger: CACAGGGGCCAGAGCTCTCAACACACTGCTCTTCCC...AATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CAA 90 bp CCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTGGGTCAGGATGTCACTaGCTCTTCGCCCTGCCTCTG +
Preference number: 5 (lower is better)
Translates to: PHLPPGLASGLGIPSASIGSGCH*LFALPL
Trigger: CAGAGGCAGGGCGAAGAGCAAGTGACATCCTGACCC...AATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CAA 90 bp GTCTCCACATCCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGCTGGTAAGGGAAGCCTaGAGGGTAGGGAAGGAGAGA +
Preference number: 5 (lower is better)
Translates to: VSTSPPSPWFGFRSWHTKLVREA*RVGKER
Trigger: TCTCTCCTTCCCTACCCTCAAGGCTTCCCTTACCAG...CTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGGATGTGGAGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CAA 90 bp TCCACATCCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCCTGGTAAGGGAAGCCTaGAGGGTAGGGAAGGAGAGA +
Preference number: 5 (lower is better)
Translates to: STSPPSPWFGFRSWHTKCLVREA*RVGKER
Trigger: TCTCTCCTTCCCTACCCTCAAGGCTTCCCTTACCAG...GCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGGATGTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CAA 90 bp TCCACATCCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCCACCTTCCCCCTGGTTaGGCTTCAGGTCTTGGCATA +
Preference number: 5 (lower is better)
Translates to: STSPPSPWFGFRSWHTKCHLPPG*ASGLGI
Trigger: TATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTG...GCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGGATGTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS GCA 90 bp ATAAGAATAGTGTCACCAGATTTCCTGGACTCTGGAAGCAGCTGCTaGCGCAGTGTCTGCAGGCTAGGGCATGGGTCAGTTGGCCCCAGA +
Preference number: 5 (lower is better)
Translates to: IRIVSPDFLDSGSSC*RSVCRLGHGSVGPR
Trigger: TCTGGGGCCAACTGACCCATGCCCTAGCCTGCAGACACTGCGGCAGCAGCTGCTTCCAGAGTCCAGGAAATCTGGTGACACTATTCTTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312292.6
CDS CCA 90 bp GTAAGGGAAGCCTTGAGGGTAGGGAAGGAGAGATACTTCTCCATGTaGGCCCAAGGACAGTGCTTACAGTGGCGAGGGGTCAGGATGTCA +
Preference number: 5 (lower is better)
Translates to: VREALRVGKERYFSM*AQGQCLQWRGVRMS
Trigger: TGACATCCTGACCCCTCGCCACTGTAAGCACTGTCCTTGGGCCCACATGGAGAAGTATCTCTCCTTCCCTACCCTCAAGGCTTCCCTTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CAA 90 bp GTCTCCACATCCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGGGGCTGCATGACTGTTaGCTCTGGTATCCCTATAGC +
Preference number: 5 (lower is better)
Translates to: VSTSPPSPWFGFRSWHTKGLHDC*LWYPYS
Trigger: GCTATAGGGATACCAGAGCAAACAGTCATGCAGCCC...CTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGGATGTGGAGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CAA 90 bp CCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTGGCAAGGGACTGGCATaGAAGACTCAGAGGCCTGAG +
Preference number: 5 (lower is better)
Translates to: PHLPPGLASGLGIPSASIGKGLA*KTQRPE
Trigger: CTCAGGCCTCTGAGTCTTCAATGCCAGTCCCTTGCC...AATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CAA 90 bp CCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTCCAGAGAGCTCTGGGTaGAGGTCCAAGACTGGAGAC +
Preference number: 5 (lower is better)
Translates to: PHLPPGLASGLGIPSASIPESSG*RSKTGD
Trigger: GTCTCCAGTCTTGGACCTCAACCCAGAGCTCTCTGG...AATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CAA 90 bp GTCTCCACATCCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGGTCTCCCACAAAGCTTaGGATTCAGACAGGACTCCC +
Preference number: 5 (lower is better)
Translates to: VSTSPPSPWFGFRSWHTKVSHKA*DSDRTP
Trigger: GGGAGTCCTGTCTGAATCCAAAGCTTTGTGGGAGAC...CTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGGATGTGGAGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CAA 90 bp CCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTCCAGTGGTTCTTTCTTaGCTCCACTGCCTCCCCGTC +
Preference number: 5 (lower is better)
Translates to: PHLPPGLASGLGIPSASIPVVLS*LHCLPV
Trigger: GACGGGGAGGCAGTGGAGCAAAGAAAGAACCACTGG...AATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CAA 90 bp CTCCACATCCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGGGGTGCTCTCTCTTTTaGGCTGAGGATGAGGCTGAA +
Preference number: 5 (lower is better)
Translates to: LHIPTFPLVWLQVLAYQVGCSLF*AEDEAE
Trigger: TTCAGCCTCATCCTCAGCCAAAAAGAGAGAGCACCC...CACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGGATGTGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CAA 90 bp CTCCACATCCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTATGGTCTCCTGCTTaGGGTTTCCTAGGGTGCTCT +
Preference number: 5 (lower is better)
Translates to: LHIPTFPLVWLQVLAYQVLWSPA*GFLGCS
Trigger: AGAGCACCCTAGGAAACCCAAAGCAGGAGACCATAG...CACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGGATGTGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CAA 90 bp CTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCGGGAAGAGCAGTGTGTaGAGAGCTCTGGCCCCTGTG +
Preference number: 5 (lower is better)
Translates to: LPPGLASGLGIPSASITSGKSSV*RALAPV
Trigger: CACAGGGGCCAGAGCTCTCAACACACTGCTCTTCCC...GCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CAA 90 bp TTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCCGGGTCAGGATGTCACTaGCTCTTCGCCCTGCCTCTG +
Preference number: 5 (lower is better)
Translates to: FPLVWLQVLAYQVLVLPAGSGCH*LFALPL
Trigger: CAGAGGCAGGGCGAAGAGCAAGTGACATCCTGACCC...GGCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS CCA 90 bp GTGTGGTTCCATAAGGGTGGTTGGAGGTGTGCTATGAACAGGGTCTaGGGAATCAGATGCCCAGAGGTTCTCTTTCTGCCCCATGGTCTC +
Preference number: 5 (lower is better)
Translates to: VWFHKGGWRCAMNRV*GIRCPEVLFLPHGL
Trigger: GAGACCATGGGGCAGAAAGAGAACCTCTGGGCATCTGATTCCCCAGACCCTGTTCATAGCACACCTCCAACCACCCTTATGGAACCACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS CCA 90 bp AGTTTCTTCAGCCTGAGTTTCAGCTCTCTACTCCACTGCCAGGCATaGATCCCAGGATGGGTGAGCAACTCTGGGACAGTCCATCTCTGG +
Preference number: 5 (lower is better)
Translates to: SFFSLSFSSLLHCQA*IPGWVSNSGTVHLW
Trigger: CCAGAGATGGACTGTCCCAGAGTTGCTCACCCATCCTGGGATCCATGCCTGGCAGTGGAGTAGAGAGCTGAAACTCAGGCTGAAGAAACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CAA 90 bp CCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCCTTTTCTGGGGCTGGAGTGGCTaGCTCTCCAGTGGGAGCTTC +
Preference number: 5 (lower is better)
Translates to: PGLASGLGIPSASITSLFWGWSG*LSSGSF
Trigger: GAAGCTCCCACTGGAGAGCAAGCCACTCCAGCCCCA...GAAAAGGCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CAA 90 bp CCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTTGGGGAAGCAACAGGTaGGACCTAGGTAGGAAGGCA +
Preference number: 5 (lower is better)
Translates to: PHLPPGLASGLGIPSASIWGSNR*DLGRKA
Trigger: TGCCTTCCTACCTAGGTCCAACCTGTTGCTTCCCCA...AATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CAA 90 bp CCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTTGCAAAATGATTGACTaGGGCCAGGGGCTCTGGAGG +
Preference number: 5 (lower is better)
Translates to: PHLPPGLASGLGIPSASICKMID*GQGLWR
Trigger: CCTCCAGAGCCCCTGGCCCAAGTCAATCATTTTGCA...AATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CAA 90 bp CTCCACATCCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTTGAGGATGACAACTaGAAGAGTGGGGGCATGGAT +
Preference number: 5 (lower is better)
Translates to: LHIPTFPLVWLQVLAYQVLEDDN*KSGGMD
Trigger: ATCCATGCCCCCACTCTTCAAGTTGTCATCCTCAAG...CACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGGATGTGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CAA 90 bp CTCCACATCCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCCTGTGTTGAGACCTTaGGGGAAATGTGCTTACAGG +
Preference number: 5 (lower is better)
Translates to: LHIPTFPLVWLQVLAYQVPVLRP*GKCAYR
Trigger: CCTGTAAGCACATTTCCCCAAAGGTCTCAACACAGG...CACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGGATGTGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS GCA 90 bp AAGGGTGGTTGGAGGTGTGCTATGAACAGGGTCTGGGGAATCAGATaGCCAGAGGTTCTCTTTCTGCCCCATGGTCTCCCACAAAGCTTT +
Preference number: 5 (lower is better)
Translates to: KGGWRCAMNRVWGIR*PEVLFLPHGLPQSF
Trigger: AAAGCTTTGTGGGAGACCATGGGGCAGAAAGAGAACCTCTGGGCATCTGATTCCCCAGACCCTGTTCATAGCACACCTCCAACCACCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS CCA 90 bp GAGGCATTCCCCAGGATTGATTCTGTGTGGTTCCATAAGGGTGGTTaGAGGTGTGCTATGAACAGGGTCTGGGGAATCAGATGCCCAGAG +
Preference number: 5 (lower is better)
Translates to: EAFPRIDSVWFHKGG*RCAMNRVWGIRCPE
Trigger: CTCTGGGCATCTGATTCCCCAGACCCTGTTCATAGCACACCTCCAACCACCCTTATGGAACCACACAGAATCAATCCTGGGGAATGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CAA 90 bp GTCTCCACATCCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGAGAAGTGGTAGTTCCTaGCCTTGCACCATATTCCCA +
Preference number: 5 (lower is better)
Translates to: VSTSPPSPWFGFRSWHTKRSGSS*PCTIFP
Trigger: TGGGAATATGGTGCAAGGCAAGGAACTACCACTTCT...CTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGGATGTGGAGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312292.6
ENST00000421362.6
CDS-3UTR CAA 90 bp CTCCACATCCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGAGAAGTGGTAGTTCCTaGCCTTGCACCATATTCCCA +
Preference number: 5 (lower is better)
Translates to: LHIPTFPLVWLQVLAYQVRSGSS*PCTIFP
Trigger: TGGGAATATGGTGCAAGGCAAGGAACTACCACTTCT...CACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGGATGTGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312292.6
ENST00000421362.6
CDS-3UTR CAA 90 bp TTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCCGGTATCCCTATAGCCTaGAGGAGGCCCTCAGAACCA +
Preference number: 5 (lower is better)
Translates to: FPLVWLQVLAYQVLVLPAGIPIA*RRPSEP
Trigger: TGGTTCTGAGGGCCTCCTCAAGGCTATAGGGATACC...GGCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CAA 90 bp GTGGTAGTTCCTGGGCCCACATTCATACCAATGACCTCACATGTGGTGTCAGCAGGTATCCCTATAGCCTaGAGGAGGCCCTCAGAACCA +
Preference number: 5 (lower is better)
Translates to: VVVPGPTFIPMTSHVVSAGIPIA*RRPSEP
Trigger: TGGTTCTGAGGGCCTCCTCAAGGCTATAGGGATACC...TGCTGACACCACATGTGAGGTCATTGGTATGAATGTGGGCCCAGGAACTACCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416537.2
CDS-3UTR CAA 90 bp CCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTGTCTCCCACAAAGCTTaGGATTCAGACAGGACTCCC +
Preference number: 5 (lower is better)
Translates to: PHLPPGLASGLGIPSASIVSHKA*DSDRTP
Trigger: GGGAGTCCTGTCTGAATCCAAAGCTTTGTGGGAGAC...AATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CAA 90 bp CTCCACATCCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGAGGCATTCCCCAGGATaGATTCTGTGTGGTTCCATA +
Preference number: 5 (lower is better)
Translates to: LHIPTFPLVWLQVLAYQVRHSPG*ILCGSI
Trigger: TATGGAACCACACAGAATCAATCCTGGGGAATGCCT...CACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGGATGTGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CAA 90 bp TCCACATCCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCAGGCTTATAGTTGCTTaGGTCTGCGATAGGCTCACT +
Preference number: 5 (lower is better)
Translates to: STSPPSPWFGFRSWHTKCRLIVA*VCDRLT
Trigger: AGTGAGCCTATCGCAGACCAAAGCAACTATAAGCCT...GCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGGATGTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CAA 90 bp CCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCCTTTTCGTGTACACATGGCCCTaGGGATGGGACCTGGCTCAC +
Preference number: 5 (lower is better)
Translates to: PGLASGLGIPSASITSLFVYTWP*GWDLAH
Trigger: GTGAGCCAGGTCCCATCCCAAGGGCCATGTGTACAC...GAAAAGGCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CAA 90 bp TTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCCCTGGTAAGGGAAGCCTaGAGGGTAGGGAAGGAGAGA +
Preference number: 5 (lower is better)
Translates to: FPLVWLQVLAYQVLVLPALVREA*RVGKER
Trigger: TCTCTCCTTCCCTACCCTCAAGGCTTCCCTTACCAG...GGCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CAA 90 bp TCCACATCCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCGTTTGGCTTCAGGTCTaGGCATACCAAGTGCTAGTA +
Preference number: 5 (lower is better)
Translates to: STSPPSPWFGFRSWHTKCVWLQV*AYQVLV
Trigger: TACTAGCACTTGGTATGCCAAGACCTGAAGCCAAAC...GCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGGATGTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CAA 90 bp CTCCACATCCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGGTTTGGCTTCAGGTCTaGGCATACCAAGTGCTAGTA +
Preference number: 5 (lower is better)
Translates to: LHIPTFPLVWLQVLAYQVVWLQV*AYQVLV
Trigger: TACTAGCACTTGGTATGCCAAGACCTGAAGCCAAAC...CACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGGATGTGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS GCA 90 bp CTGAGGGCCAGAGATGGAGACCTAGAAGCCGAGGAATTCCTGGAATaGTCAGTATCCTTCCATGTAGCTTCTGATGTAGCGAGGCATTCC +
Preference number: 5 (lower is better)
Translates to: LRARDGDLEAEEFLE*SVSFHVASDVARHS
Trigger: GGAATGCCTCGCTACATCAGAAGCTACATGGAAGGATACTGAGCATTCCAGGAATTCCTCGGCTTCTAGGTCTCCATCTCTGGCCCTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CAA 90 bp CCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCCTTTGGTATCCCTATAGCCTaGAGGAGGCCCTCAGAACCA +
Preference number: 5 (lower is better)
Translates to: PLVWLQVLAYQVLVLPAFGIPIA*RRPSEP
Trigger: TGGTTCTGAGGGCCTCCTCAAGGCTATAGGGATACC...AAAGGCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CAA 90 bp GCAGAAGTGGTAGTTCCTGGGCCCACATTCATACCAATGACCTCACATGTGGTGGGGCTGCATGACTGTTaGCTCTGGTATCCCTATAGC +
Preference number: 5 (lower is better)
Translates to: AEVVVPGPTFIPMTSHVVGLHDC*LWYPYS
Trigger: GCTATAGGGATACCAGAGCAAACAGTCATGCAGCCC...CACCACATGTGAGGTCATTGGTATGAATGTGGGCCCAGGAACTACCACTTCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416537.2
CDS-3UTR CAA 90 bp CCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCCTTTCCAGATAAAACTCCCTaGTGGTCCACAGGGAAGGGC +
Preference number: 5 (lower is better)
Translates to: PLVWLQVLAYQVLVLPAFPDKTP*WSTGKG
Trigger: GCCCTTCCCTGTGGACCACAAGGGAGTTTTATCTGG...AAAGGCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CAA 90 bp CCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCCTTTTCCCAGAGAGCTCTGGGTaGAGGTCCAAGACTGGAGAC +
Preference number: 5 (lower is better)
Translates to: PGLASGLGIPSASITSLFPESSG*RSKTGD
Trigger: GTCTCCAGTCTTGGACCTCAACCCAGAGCTCTCTGG...GAAAAGGCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CAA 90 bp TCCACATCCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCGGGAACTTCTCTTTGTaGCACATTTCTCCACACAAG +
Preference number: 5 (lower is better)
Translates to: STSPPSPWFGFRSWHTKCGNFSL*HISPHK
Trigger: CTTGTGTGGAGAAATGTGCAACAAAGAGAAGTTCCC...GCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGGATGTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CAA 90 bp TCCACATCCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTTGGGGAACTTCTCTTaGTTGCACATTTCTCCACAC +
Preference number: 5 (lower is better)
Translates to: STSPPSPWFGFRSWHTKCLGNFS*LHISPH
Trigger: GTGTGGAGAAATGTGCAACAAAGAGAAGTTCCCCAA...GCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGGATGTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CAA 90 bp GTCTCCACATCCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTTGGGGAACTTCTCTTaGTTGCACATTTCTCCACAC +
Preference number: 5 (lower is better)
Translates to: VSTSPPSPWFGFRSWHTKLGNFS*LHISPH
Trigger: GTGTGGAGAAATGTGCAACAAAGAGAAGTTCCCCAA...CTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGGATGTGGAGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CAA 90 bp CCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTCTTGAGGATGACAACTaGAAGAGTGGGGGCATGGAT +
Preference number: 5 (lower is better)
Translates to: PHLPPGLASGLGIPSASILEDDN*KSGGMD
Trigger: ATCCATGCCCCCACTCTTCAAGTTGTCATCCTCAAG...AATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CAA 90 bp CCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTAAGCTGGGAAGAGGATaGGAAGTGATGACAGTGGGA +
Preference number: 5 (lower is better)
Translates to: PHLPPGLASGLGIPSASIKLGRG*EVMTVG
Trigger: TCCCACTGTCATCACTTCCAATCCTCTTCCCAGCTT...AATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CAA 90 bp CCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTGCCTTGTCCTTTCTCTaGCCTGAGACCAGAACCTTA +
Preference number: 5 (lower is better)
Translates to: PHLPPGLASGLGIPSASIALSFL*PETRTL
Trigger: TAAGGTTCTGGTCTCAGGCAAGAGAAAGGACAAGGC...AATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CAA 90 bp TTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCCGGGTGCTCTCTCTTTTaGGCTGAGGATGAGGCTGAA +
Preference number: 5 (lower is better)
Translates to: FPLVWLQVLAYQVLVLPAGCSLF*AEDEAE
Trigger: TTCAGCCTCATCCTCAGCCAAAAAGAGAGAGCACCC...GGCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CAA 90 bp TTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCCCTATGGTCTCCTGCTTaGGGTTTCCTAGGGTGCTCT +
Preference number: 5 (lower is better)
Translates to: FPLVWLQVLAYQVLVLPALWSPA*GFLGCS
Trigger: AGAGCACCCTAGGAAACCCAAAGCAGGAGACCATAG...GGCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS TCA 90 bp GGATTGATTCTGTGTGGTTCCATAAGGGTGGTTGGAGGTGTGCTATaGACAGGGTCTGGGGAATCAGATGCCCAGAGGTTCTCTTTCTGC +
Preference number: 5 (lower is better)
Translates to: GLILCGSIRVVGGVL*TGSGESDAQRFSFC
Trigger: GCAGAAAGAGAACCTCTGGGCATCTGATTCCCCAGACCCTGTTCATAGCACACCTCCAACCACCCTTATGGAACCACACAGAATCAATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS CCA 90 bp AGAGGTTTCCTGAGTTTTCTCTGCATTCCCACTGGGGCTTATATCTaGATGGATCTTCCAGGGAACTCTCTCTCTGGAGTTCTGGCAGGG +
Preference number: 5 (lower is better)
Translates to: RGFLSFLCIPTGAYI*MDLPGNSLSGVLAG
Trigger: CCCTGCCAGAACTCCAGAGAGAGAGTTCCCTGGAAGATCCATCCAGATATAAGCCCCAGTGGGAATGCAGAGAAAACTCAGGAAACCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS CCA 90 bp GTCTGCAGGGACCCAAATATTTTCTCTACTTTGCATGCCCTTCCATaGTGTCTCAGATGCTGGTGGGACACATTCAGGGCTGGTTCCAGA +
Preference number: 5 (lower is better)
Translates to: VCRDPNIFSTLHALP*CLRCWWDTFRAGSR
Trigger: TCTGGAACCAGCCCTGAATGTGTCCCACCAGCATCTGAGACACCATGGAAGGGCATGCAAAGTAGAGAAAATATTTGGGTCCCTGCAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS CCA 90 bp TTCCCTGTGACTGTGGATAACCCCAACCTTGCAGTCCCTCTTCTATaGTCTCCTGCTTTGGGTTTCCTAGGGTGCTCTCTCTTTTTGGCT +
Preference number: 5 (lower is better)
Translates to: FPVTVDNPNLAVPLL*SPALGFLGCSLFLA
Trigger: AGCCAAAAAGAGAGAGCACCCTAGGAAACCCAAAGCAGGAGACCATAGAAGAGGGACTGCAAGGTTGGGGTTATCCACAGTCACAGGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CAA 90 bp CCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCCTTTGGGCTGCATGACTGTTaGCTCTGGTATCCCTATAGC +
Preference number: 5 (lower is better)
Translates to: PLVWLQVLAYQVLVLPAFGLHDC*LWYPYS
Trigger: GCTATAGGGATACCAGAGCAAACAGTCATGCAGCCC...AAAGGCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CAA 90 bp TCCACATCCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCAGGAAGGCAAGCTTGTaGAAGAAGACAGAAGAACAA +
Preference number: 5 (lower is better)
Translates to: STSPPSPWFGFRSWHTKCRKASL*KKTEEQ
Trigger: TTGTTCTTCTGTCTTCTTCAACAAGCTTGCCTTCCT...GCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGGATGTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CAA 90 bp GTCTCCACATCCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGAGGAAGGCAAGCTTGTaGAAGAAGACAGAAGAACAA +
Preference number: 5 (lower is better)
Translates to: VSTSPPSPWFGFRSWHTKRKASL*KKTEEQ
Trigger: TTGTTCTTCTGTCTTCTTCAACAAGCTTGCCTTCCT...CTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGGATGTGGAGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CAA 90 bp CCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCCTTTTCCCAGATAAAACTCCCTaGTGGTCCACAGGGAAGGGC +
Preference number: 5 (lower is better)
Translates to: PGLASGLGIPSASITSLFPDKTP*WSTGKG
Trigger: GCCCTTCCCTGTGGACCACAAGGGAGTTTTATCTGG...GAAAAGGCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CAA 90 bp CCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCCTTTTCTGCAAAATGATTGACTaGGGCCAGGGGCTCTGGAGG +
Preference number: 5 (lower is better)
Translates to: PGLASGLGIPSASITSLFCKMID*GQGLWR
Trigger: CCTCCAGAGCCCCTGGCCCAAGTCAATCATTTTGCA...GAAAAGGCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CAA 90 bp TTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCCCTTGAGGATGACAACTaGAAGAGTGGGGGCATGGAT +
Preference number: 5 (lower is better)
Translates to: FPLVWLQVLAYQVLVLPALEDDN*KSGGMD
Trigger: ATCCATGCCCCCACTCTTCAAGTTGTCATCCTCAAG...GGCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CAA 90 bp TTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCCTGGATAACCCCAACCTaGCAGTCCCTCTTCTATGGT +
Preference number: 5 (lower is better)
Translates to: FPLVWLQVLAYQVLVLPAWITPT*QSLFYG
Trigger: ACCATAGAAGAGGGACTGCAAGGTTGGGGTTATCCA...GGCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CAA 90 bp CTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCTGGATAACCCCAACCTaGCAGTCCCTCTTCTATGGT +
Preference number: 5 (lower is better)
Translates to: LPPGLASGLGIPSASITSWITPT*QSLFYG
Trigger: ACCATAGAAGAGGGACTGCAAGGTTGGGGTTATCCA...GCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CAA 90 bp TCCACATCCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTGGTTATCCAGGCATTaGGCTAACACCTTTTGCAAA +
Preference number: 5 (lower is better)
Translates to: STSPPSPWFGFRSWHTKCWLSRH*ANTFCK
Trigger: TTTGCAAAAGGTGTTAGCCAAATGCCTGGATAACCA...GCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGGATGTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CAA 90 bp CCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCCTTTTCCACCTTCCCCCTGGTTaGGCTTCAGGTCTTGGCATA +
Preference number: 5 (lower is better)
Translates to: PGLASGLGIPSASITSLFHLPPG*ASGLGI
Trigger: TATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTG...GAAAAGGCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS CCA 90 bp GACTCAAAAGCCCAGAGGTTTCCTGAGTTTTCTCTGCATTCCCACTaGGGCTTATATCTGGATGGATCTTCCAGGGAACTCTCTCTCTGG +
Preference number: 5 (lower is better)
Translates to: DSKAQRFPEFSLHSH*GLYLDGSSRELSLW
Trigger: CCAGAGAGAGAGTTCCCTGGAAGATCCATCCAGATATAAGCCCCAGTGGGAATGCAGAGAAAACTCAGGAAACCTCTGGGCTTTTGAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CAA 90 bp CCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCCTTTTCGGGCTGCATGACTGTTaGCTCTGGTATCCCTATAGC +
Preference number: 5 (lower is better)
Translates to: PGLASGLGIPSASITSLFGLHDC*LWYPYS
Trigger: GCTATAGGGATACCAGAGCAAACAGTCATGCAGCCC...GAAAAGGCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CAA 90 bp CTCCACATCCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGAATATTTTCTCTACTTaGCATGCCCTTCCATGGTGT +
Preference number: 5 (lower is better)
Translates to: LHIPTFPLVWLQVLAYQVNIFST*HALPWC
Trigger: ACACCATGGAAGGGCATGCAAAGTAGAGAAAATATT...CACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGGATGTGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CAA 90 bp TCCACATCCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCAATATTTTCTCTACTTaGCATGCCCTTCCATGGTGT +
Preference number: 5 (lower is better)
Translates to: STSPPSPWFGFRSWHTKCNIFST*HALPWC
Trigger: ACACCATGGAAGGGCATGCAAAGTAGAGAAAATATT...GCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGGATGTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CAA 90 bp CCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCCTTTTCGTCTCCCACAAAGCTTaGGATTCAGACAGGACTCCC +
Preference number: 5 (lower is better)
Translates to: PGLASGLGIPSASITSLFVSHKA*DSDRTP
Trigger: GGGAGTCCTGTCTGAATCCAAAGCTTTGTGGGAGAC...GAAAAGGCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CAA 90 bp TTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCCAGGCATTCCCCAGGATaGATTCTGTGTGGTTCCATA +
Preference number: 5 (lower is better)
Translates to: FPLVWLQVLAYQVLVLPARHSPG*ILCGSI
Trigger: TATGGAACCACACAGAATCAATCCTGGGGAATGCCT...GGCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CAA 90 bp CCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTGGGAACTTCTCTTTGTaGCACATTTCTCCACACAAG +
Preference number: 5 (lower is better)
Translates to: PHLPPGLASGLGIPSASIGNFSL*HISPHK
Trigger: CTTGTGTGGAGAAATGTGCAACAAAGAGAAGTTCCC...AATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CAA 90 bp CCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTTTGGGGAACTTCTCTTaGTTGCACATTTCTCCACAC +
Preference number: 5 (lower is better)
Translates to: PHLPPGLASGLGIPSASILGNFS*LHISPH
Trigger: GTGTGGAGAAATGTGCAACAAAGAGAAGTTCCCCAA...AATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CAA 90 bp CCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCCTTTAAGCTGGGAAGAGGATaGGAAGTGATGACAGTGGGA +
Preference number: 5 (lower is better)
Translates to: PLVWLQVLAYQVLVLPAFKLGRG*EVMTVG
Trigger: TCCCACTGTCATCACTTCCAATCCTCTTCCCAGCTT...AAAGGCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CAA 90 bp CCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCCTTTGCCTTGTCCTTTCTCTaGCCTGAGACCAGAACCTTA +
Preference number: 5 (lower is better)
Translates to: PLVWLQVLAYQVLVLPAFALSFL*PETRTL
Trigger: TAAGGTTCTGGTCTCAGGCAAGAGAAAGGACAAGGC...AAAGGCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CAA 90 bp CCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCCTTTTCCTATGGTCTCCTGCTTaGGGTTTCCTAGGGTGCTCT +
Preference number: 5 (lower is better)
Translates to: PGLASGLGIPSASITSLFLWSPA*GFLGCS
Trigger: AGAGCACCCTAGGAAACCCAAAGCAGGAGACCATAG...GAAAAGGCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CAA 90 bp CCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCCTTTTCGCCTTGTCCTTTCTCTaGCCTGAGACCAGAACCTTA +
Preference number: 5 (lower is better)
Translates to: PGLASGLGIPSASITSLFALSFL*PETRTL
Trigger: TAAGGTTCTGGTCTCAGGCAAGAGAAAGGACAAGGC...GAAAAGGCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CAA 90 bp CCCCACCTTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTTGGTTATCCAGGCATTaGGCTAACACCTTTTGCAAA +
Preference number: 5 (lower is better)
Translates to: PHLPPGLASGLGIPSASIWLSRH*ANTFCK
Trigger: TTTGCAAAAGGTGTTAGCCAAATGCCTGGATAACCA...AATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTGGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CAA 90 bp CCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCCTTTGTTTGGCTTCAGGTCTaGGCATACCAAGTGCTAGTA +
Preference number: 5 (lower is better)
Translates to: PLVWLQVLAYQVLVLPAFVWLQV*AYQVLV
Trigger: TACTAGCACTTGGTATGCCAAGACCTGAAGCCAAAC...AAAGGCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CAA 90 bp TTCCCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCCAGGAAGGCAAGCTTGTaGAAGAAGACAGAAGAACAA +
Preference number: 5 (lower is better)
Translates to: FPLVWLQVLAYQVLVLPARKASL*KKTEEQ
Trigger: TTGTTCTTCTGTCTTCTTCAACAAGCTTGCCTTCCT...GGCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CAA 90 bp GTGGTAGTTCCTGGGCCCACATTCATACCAATGACCTCACATGTGGTGTCAGCAAGGAAGGCAAGCTTGTaGAAGAAGACAGAAGAACAA +
Preference number: 5 (lower is better)
Translates to: VVVPGPTFIPMTSHVVSARKASL*KKTEEQ
Trigger: TTGTTCTTCTGTCTTCTTCAACAAGCTTGCCTTCCT...TGCTGACACCACATGTGAGGTCATTGGTATGAATGTGGGCCCAGGAACTACCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416537.2
CDS-3UTR CAA 90 bp CCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCCTTTTCAGGCTTATAGTTGCTTaGGTCTGCGATAGGCTCACT +
Preference number: 5 (lower is better)
Translates to: PGLASGLGIPSASITSLFRLIVA*VCDRLT
Trigger: AGTGAGCCTATCGCAGACCAAAGCAACTATAAGCCT...GAAAAGGCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CAA 90 bp CCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCCTTTGGGAACTTCTCTTTGTaGCACATTTCTCCACACAAG +
Preference number: 5 (lower is better)
Translates to: PLVWLQVLAYQVLVLPAFGNFSL*HISPHK
Trigger: CTTGTGTGGAGAAATGTGCAACAAAGAGAAGTTCCC...AAAGGCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CAA 90 bp TCTAATTCAGCTAGTTTATTAGAATTTCCATTTCTTGTCTCCACATCCCCACCTCCCTCTCTGAGACCCTaGTTCCGCCCTGCCAGACTC +
Preference number: 5 (lower is better)
Translates to: SNSASLLEFPFLVSTSPPPSLRP*FRPARL
Trigger: GAGTCTGGCAGGGCGGAACAAGGGTCTCAGAGAGGG...AGGTGGGGATGTGGAGACAAGAAATGGAAATTCTAATAAACTAGCTGAATTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CAA 90 bp TCTAATTCAGCTAGTTTATTAGAATTTCCATTTCTTGTCTCCACATCCCCACCTGGCAAGGGACTGGCATaGAAGACTCAGAGGCCTGAG +
Preference number: 5 (lower is better)
Translates to: SNSASLLEFPFLVSTSPPGKGLA*KTQRPE
Trigger: CTCAGGCCTCTGAGTCTTCAATGCCAGTCCCTTGCC...AGGTGGGGATGTGGAGACAAGAAATGGAAATTCTAATAAACTAGCTGAATTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CAA 90 bp CCCCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCCTTTAATATTTTCTCTACTTaGCATGCCCTTCCATGGTGT +
Preference number: 5 (lower is better)
Translates to: PLVWLQVLAYQVLVLPAFNIFST*HALPWC
Trigger: ACACCATGGAAGGGCATGCAAAGTAGAGAAAATATT...AAAGGCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CAA 90 bp CCTGGTTTGGCTTCAGGTCTTGGCATACCAAGTGCTAGTATTACCAGCCTTTTCTGGTTATCCAGGCATTaGGCTAACACCTTTTGCAAA +
Preference number: 5 (lower is better)
Translates to: PGLASGLGIPSASITSLFWLSRH*ANTFCK
Trigger: TTTGCAAAAGGTGTTAGCCAAATGCCTGGATAACCA...GAAAAGGCTGGTAATACTAGCACTTGGTATGCCAAGACCTGAAGCCAAACCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CAA 90 bp TCTAATTCAGCTAGTTTATTAGAATTTCCATTTCTTGTCTCCACATCCCCACCTGGTATCCCTATAGCCTaGAGGAGGCCCTCAGAACCA +
Preference number: 5 (lower is better)
Translates to: SNSASLLEFPFLVSTSPPGIPIA*RRPSEP
Trigger: TGGTTCTGAGGGCCTCCTCAAGGCTATAGGGATACC...AGGTGGGGATGTGGAGACAAGAAATGGAAATTCTAATAAACTAGCTGAATTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CAA 90 bp TCTAATTCAGCTAGTTTATTAGAATTTCCATTTCTTGTCTCCACATCCCCACCTCACCTTCCCCCTGGTTaGGCTTCAGGTCTTGGCATA +
Preference number: 5 (lower is better)
Translates to: SNSASLLEFPFLVSTSPPHLPPG*ASGLGI
Trigger: TATGCCAAGACCTGAAGCCAAACCAGGGGGAAGGTG...AGGTGGGGATGTGGAGACAAGAAATGGAAATTCTAATAAACTAGCTGAATTAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CAA 90 bp TCTAATTCAGCTAGTTTATTAGAATTTCCATTTCTTGTCTCCACATCCCCACCTTGGATAACCCCAACCTaGCAGTCCCTCTTCTATGGT +
Preference number: 5 (lower is better)
Translates to: SNSASLLEFPFLVSTSPPWITPT*QSLFYG
Trigger: ACCATAGAAGAGGGACTGCAAGGTTGGGGTTATCCA...AGGTGGGGATGTGGAGACAAGAAATGGAAATTCTAATAAACTAGCTGAATTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CAA 90 bp TCTAATTCAGCTAGTTTATTAGAATTTCCATTTCTTGTCTCCACATCCCCACCTCCTGTGTTGAGACCTTaGGGGAAATGTGCTTACAGG +
Preference number: 5 (lower is better)
Translates to: SNSASLLEFPFLVSTSPPPVLRP*GKCAYR
Trigger: CCTGTAAGCACATTTCCCCAAAGGTCTCAACACAGG...AGGTGGGGATGTGGAGACAAGAAATGGAAATTCTAATAAACTAGCTGAATTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS-3UTR CAA 90 bp TCTAATTCAGCTAGTTTATTAGAATTTCCATTTCTTGTCTCCACATCCCCACCTAGGCTTATAGTTGCTTaGGTCTGCGATAGGCTCACT +
Preference number: 5 (lower is better)
Translates to: SNSASLLEFPFLVSTSPPRLIVA*VCDRLT
Trigger: AGTGAGCCTATCGCAGACCAAAGCAACTATAAGCCT...AGGTGGGGATGTGGAGACAAGAAATGGAAATTCTAATAAACTAGCTGAATTAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS CCA 72 bp AAGCAGCTGCTGCCGCAGTGTCTGCAGGCTAGGGCATaGGTCAGTTGGCCCCAGAGAAGCCCCATATCCCCC +
Preference number: 6 (lower is better)
Translates to: KQLLPQCLQARA*VSWPQRSPISP
Trigger: GGGGGATATGGGGCTTCTCTGGGGCCAACTGACCCATGCCCTAGCCTGCAGACACTGCGGCAGCAGCTGCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312292.6
ENST00000378745.3
CDS CAA 90 bp GGGCCCAAGGACAGTGCTTACAGTGGCGAGGGGTCAGGATGTCACTaGCTCTTCGCCCTGCCTCTGGCTGATCCTGGGGACCCGAAGCTT +
Preference number: 6 (lower is better)
Translates to: GPKDSAYSGEGSGCH*LFALPLADPGDPKL
Trigger: AAGCTTCGGGTCCCCAGGATCAGCCAGAGGCAGGGCGAAGAGCAAGTGACATCCTGACCCCTCGCCACTGTAAGCACTGTCCTTGGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS CCA 72 bp CTGCCAGGCATGGATCCCAGGATGGGTGAGCAACTCTaGGACAGTCCATCTCTGGGAGAGTGGGGCCTCTGC +
Preference number: 6 (lower is better)
Translates to: LPGMDPRMGEQL*DSPSLGEWGLC
Trigger: GCAGAGGCCCCACTCTCCCAGAGATGGACTGTCCCAGAGTTGCTCACCCATCCTGGGATCCATGCCTGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS GCA 72 bp TTCCTGGACTCTGGAAGCAGCTGCTGCCGCAGTGTCTaGAGGCTAGGGCATGGGTCAGTTGGCCCCAGAGAA +
Preference number: 6 (lower is better)
Translates to: FLDSGSSCCRSV*RLGHGSVGPRE
Trigger: TTCTCTGGGGCCAACTGACCCATGCCCTAGCCTGCAGACACTGCGGCAGCAGCTGCTTCCAGAGTCCAGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312292.6
ENST00000378745.3
CDS CAA 72 bp GACAGTGCTTACAGTGGCGAGGGGTCAGGATGTCACTaGCTCTTCGCCCTGCCTCTGGCTGATCCTGGGGAC +
Preference number: 6 (lower is better)
Translates to: DSAYSGEGSGCH*LFALPLADPGD
Trigger: GTCCCCAGGATCAGCCAGAGGCAGGGCGAAGAGCAAGTGACATCCTGACCCCTCGCCACTGTAAGCACTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS CCA 72 bp CATGGATCTAACTCTGAGCAGCTCCGGTGCAAGAGCTaGGGGTGGGCTGAGGGCCAGAGATGGAGACCTAGA +
Preference number: 6 (lower is better)
Translates to: HGSNSEQLRCKS*GWAEGQRWRPR
Trigger: TCTAGGTCTCCATCTCTGGCCCTCAGCCCACCCCCAGCTCTTGCACCGGAGCTGCTCAGAGTTAGATCCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS TCA 72 bp CTCTGGAGGCAGGGCTCTGCCGCAGTTTCTTCAGCCTaGGTTTCAGCTCTCTACTCCACTGCCAGGCATGGA +
Preference number: 6 (lower is better)
Translates to: LWRQGSAAVSSA*VSALYSTARHG
Trigger: TCCATGCCTGGCAGTGGAGTAGAGAGCTGAAACTCAGGCTGAAGAAACTGCGGCAGAGCCCTGCCTCCAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS TCA 72 bp CTAGGCTTCTGGCCTGGGCAGGGTGGTTCTTCCCTGTaGCTGTGGATAACCCCAACCTTGCAGTCCCTCTTC +
Preference number: 6 (lower is better)
Translates to: LGFWPGQGGSSL*LWITPTLQSLF
Trigger: GAAGAGGGACTGCAAGGTTGGGGTTATCCACAGTCACAGGGAAGAACCACCCTGCCCAGGCCAGAAGCCTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS GCA 72 bp GTGTCACCAGATTTCCTGGACTCTGGAAGCAGCTGCTaGCGCAGTGTCTGCAGGCTAGGGCATGGGTCAGTT +
Preference number: 6 (lower is better)
Translates to: VSPDFLDSGSSC*RSVCRLGHGSV
Trigger: AACTGACCCATGCCCTAGCCTGCAGACACTGCGGCAGCAGCTGCTTCCAGAGTCCAGGAAATCTGGTGACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312292.6
CDS CCA 72 bp GCCTTGAGGGTAGGGAAGGAGAGATACTTCTCCATGTaGGCCCAAGGACAGTGCTTACAGTGGCGAGGGGTC +
Preference number: 6 (lower is better)
Translates to: ALRVGKERYFSM*AQGQCLQWRGV
Trigger: GACCCCTCGCCACTGTAAGCACTGTCCTTGGGCCCACATGGAGAAGTATCTCTCCTTCCCTACCCTCAAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS GCA 72 bp GTAGTTCCAGATTTCCTGGACTCTGGAAGCAGCTGCTaGCGCAGTGTCTGCAGGCTAGGGCATGGGTCAGTT +
Preference number: 6 (lower is better)
Translates to: VVPDFLDSGSSC*RSVCRLGHGSV
Trigger: AACTGACCCATGCCCTAGCCTGCAGACACTGCGGCAGCAGCTGCTTCCAGAGTCCAGGAAATCTGGAACTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378745.3
CDS CCA 72 bp TGTGTGGGTGCCTCAGCGCCAGATAAAACTCCCTTGTaGTCCACAGGGAAGGGCCTCAGATGGAGGAGTAGT +
Preference number: 6 (lower is better)
Translates to: CVGASAPDKTPL*STGKGLRWRSS
Trigger: ACTACTCCTCCATCTGAGGCCCTTCCCTGTGGACCACAAGGGAGTTTTATCTGGCGCTGAGGCACCCACACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS CCA 72 bp GATGAGTGCGTTCAATCTTCACAGCTTCAGCTAGGGTaGGAGGCTGGGGTACTGGGTGTAGGGGATCCACTG +
Preference number: 6 (lower is better)
Translates to: DECVQSSQLQLG*EAGVLGVGDPL
Trigger: CAGTGGATCCCCTACACCCAGTACCCCAGCCTCCCACCCTAGCTGAAGCTGTGAAGATTGAACGCACTCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS CAA 90 bp GATGCCCAGAGGTTCTCTTTCTGCCCCATGGTCTCCCACAAAGCTTaGGATTCAGACAGGACTCCCTGGGGGCCCATTACTAGAGACTCC +
Preference number: 6 (lower is better)
Translates to: DAQRFSFCPMVSHKA*DSDRTPWGPITRDS
Trigger: GGAGTCTCTAGTAATGGGCCCCCAGGGAGTCCTGTCTGAATCCAAAGCTTTGTGGGAGACCATGGGGCAGAAAGAGAACCTCTGGGCATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS TCA 72 bp ACCCCTGGGCACGTTACTCCCTTGGGTAGACCAGGATaGGTGCGTTCAATCTTCACAGCTTCAGCTAGGGTG +
Preference number: 6 (lower is better)
Translates to: TPGHVTPLGRPG*VRSIFTASARV
Trigger: CACCCTAGCTGAAGCTGTGAAGATTGAACGCACTCATCCTGGTCTACCCAAGGGAGTAACGTGCCCAGGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS GCA 72 bp TGGAGGTGTGCTATGAACAGGGTCTGGGGAATCAGATaGCCAGAGGTTCTCTTTCTGCCCCATGGTCTCCCA +
Preference number: 6 (lower is better)
Translates to: WRCAMNRVWGIR*PEVLFLPHGLP
Trigger: TGGGAGACCATGGGGCAGAAAGAGAACCTCTGGGCATCTGATTCCCCAGACCCTGTTCATAGCACACCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS GCA 72 bp CTGGGCACGTTACTCCCTTGGGTAGACCAGGATGAGTaGGTTCAATCTTCACAGCTTCAGCTAGGGTGGGAG +
Preference number: 6 (lower is better)
Translates to: LGTLLPWVDQDE*VQSSQLQLGWE
Trigger: CTCCCACCCTAGCTGAAGCTGTGAAGATTGAACGCACTCATCCTGGTCTACCCAAGGGAGTAACGTGCCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS GCA 72 bp TCATTTTCTCCCCTCTCTGAGACCCTTGTTCCGCCCTaGCAGACTCCTGTGGCTGAAGCTGGGAAGAGGATT +
Preference number: 6 (lower is better)
Translates to: SFSPLSETLVPP*QTPVAEAGKRI
Trigger: AATCCTCTTCCCAGCTTCAGCCACAGGAGTCTGGCAGGGCGGAACAAGGGTCTCAGAGAGGGGAGAAAATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS CCA 72 bp TGGTGGGACACATTCAGGGCTGGTTCCAGAGAGCTCTaGGTTGAGGTCCAAGACTGGAGACTCAAAAGCCCA +
Preference number: 6 (lower is better)
Translates to: WWDTFRAGSREL*VEVQDWRLKSP
Trigger: TGGGCTTTTGAGTCTCCAGTCTTGGACCTCAACCCAGAGCTCTCTGGAACCAGCCCTGAATGTGTCCCACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS CCA 72 bp ACTTTGCATGCCCTTCCATGGTGTCTCAGATGCTGGTaGGACACATTCAGGGCTGGTTCCAGAGAGCTCTGG +
Preference number: 6 (lower is better)
Translates to: TLHALPWCLRCW*DTFRAGSRELW
Trigger: CCAGAGCTCTCTGGAACCAGCCCTGAATGTGTCCCACCAGCATCTGAGACACCATGGAAGGGCATGCAAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS CCA 72 bp GTCTCCCACAAAGCTTTGGATTCAGACAGGACTCCCTaGGGGCCCATTACTAGAGACTCCAGGAGAGGGACT +
Preference number: 6 (lower is better)
Translates to: VSHKALDSDRTP*GPITRDSRRGT
Trigger: AGTCCCTCTCCTGGAGTCTCTAGTAATGGGCCCCCAGGGAGTCCTGTCTGAATCCAAAGCTTTGTGGGAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS GCA 72 bp AAGGAGAGATACTTCTCCATGTGGGCCCAAGGACAGTaGTTACAGTGGCGAGGGGTCAGGATGTCACTTGCT +
Preference number: 6 (lower is better)
Translates to: KERYFSMWAQGQ*LQWRGVRMSLA
Trigger: AGCAAGTGACATCCTGACCCCTCGCCACTGTAAGCACTGTCCTTGGGCCCACATGGAGAAGTATCTCTCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS CCA 72 bp TTATATCTGGATGGATCTTCCAGGGAACTCTCTCTCTaGAGTTCTGGCAGGGAGTCTAGGGGAGGGCAAGGG +
Preference number: 6 (lower is better)
Translates to: LYLDGSSRELSL*SSGRESRGGQG
Trigger: CCCTTGCCCTCCCCTAGACTCCCTGCCAGAACTCCAGAGAGAGAGTTCCCTGGAAGATCCATCCAGATATAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS CCA 72 bp TCTACTTTGCATGCCCTTCCATGGTGTCTCAGATGCTaGTGGGACACATTCAGGGCTGGTTCCAGAGAGCTC +
Preference number: 6 (lower is better)
Translates to: STLHALPWCLRC*WDTFRAGSREL
Trigger: GAGCTCTCTGGAACCAGCCCTGAATGTGTCCCACCAGCATCTGAGACACCATGGAAGGGCATGCAAAGTAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS CCA 72 bp CTTGAGGATGACAACTTGAAGAGTGGGGGCATGGATTaGGGGGATAAATCTGCTGTGGTGGGCAGGAAGGGA +
Preference number: 6 (lower is better)
Translates to: LEDDNLKSGGMD*GDKSAVVGRKG
Trigger: TCCCTTCCTGCCCACCACAGCAGATTTATCCCCCCAATCCATGCCCCCACTCTTCAAGTTGTCATCCTCAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS GCA 72 bp TTCTCTACTTTGCATGCCCTTCCATGGTGTCTCAGATaGTGGTGGGACACATTCAGGGCTGGTTCCAGAGAG +
Preference number: 6 (lower is better)
Translates to: FSTLHALPWCLR*WWDTFRAGSRE
Trigger: CTCTCTGGAACCAGCCCTGAATGTGTCCCACCAGCATCTGAGACACCATGGAAGGGCATGCAAAGTAGAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS GCA 72 bp AGTTTCTTCAGCCTGAGTTTCAGCTCTCTACTCCACTaGCAGGCATGGATCCCAGGATGGGTGAGCAACTCT +
Preference number: 6 (lower is better)
Translates to: SFFSLSFSSLLH*QAWIPGWVSNS
Trigger: AGAGTTGCTCACCCATCCTGGGATCCATGCCTGGCAGTGGAGTAGAGAGCTGAAACTCAGGCTGAAGAAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS GCA 72 bp GGTCGATGGTTATCCAGGCATTTGGCTAACACCTTTTaGAAACCCCTGGTAAGGGAAGCCTTGAGGGTAGGG +
Preference number: 6 (lower is better)
Translates to: GRWLSRHLANTF*KPLVREALRVG
Trigger: CCCTACCCTCAAGGCTTCCCTTACCAGGGGTTTGCAAAAGGTGTTAGCCAAATGCCTGGATAACCATCGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS CCA 72 bp ACTGTGGATAACCCCAACCTTGCAGTCCCTCTTCTATaGTCTCCTGCTTTGGGTTTCCTAGGGTGCTCTCTC +
Preference number: 6 (lower is better)
Translates to: TVDNPNLAVPLL*SPALGFLGCSL
Trigger: GAGAGAGCACCCTAGGAAACCCAAAGCAGGAGACCATAGAAGAGGGACTGCAAGGTTGGGGTTATCCACAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS CAA 90 bp AGGCATTTGGCTAACACCTTTTGCAAACCCCTGGTAAGGGAAGCCTaGAGGGTAGGGAAGGAGAGATACTTCTCCATGTGGGCCCAAGGA +
Preference number: 6 (lower is better)
Translates to: RHLANTFCKPLVREA*RVGKERYFSMWAQG
Trigger: TCCTTGGGCCCACATGGAGAAGTATCTCTCCTTCCCTACCCTCAAGGCTTCCCTTACCAGGGGTTTGCAAAAGGTGTTAGCCAAATGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS CAA 90 bp TCTCTCTTTTTGGCTGAGGATGAGGCTGAAGCCTTGTCCTTTCTCTaGCCTGAGACCAGAACCTTAGAGTTTGAGGGTTCTCCTGGGCCT +
Preference number: 6 (lower is better)
Translates to: SLFLAEDEAEALSFL*PETRTLEFEGSPGP
Trigger: AGGCCCAGGAGAACCCTCAAACTCTAAGGTTCTGGTCTCAGGCAAGAGAAAGGACAAGGCTTCAGCCTCATCCTCAGCCAAAAAGAGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS CAA 90 bp CTTCTATGGTCTCCTGCTTTGGGTTTCCTAGGGTGCTCTCTCTTTTaGGCTGAGGATGAGGCTGAAGCCTTGTCCTTTCTCTTGCCTGAG +
Preference number: 6 (lower is better)
Translates to: LLWSPALGFLGCSLF*AEDEAEALSFLLPE
Trigger: CTCAGGCAAGAGAAAGGACAAGGCTTCAGCCTCATCCTCAGCCAAAAAGAGAGAGCACCCTAGGAAACCCAAAGCAGGAGACCATAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS CCA 72 bp GCCCAGAGGTTTCCTGAGTTTTCTCTGCATTCCCACTaGGGCTTATATCTGGATGGATCTTCCAGGGAACTC +
Preference number: 6 (lower is better)
Translates to: AQRFPEFSLHSH*GLYLDGSSREL
Trigger: GAGTTCCCTGGAAGATCCATCCAGATATAAGCCCCAGTGGGAATGCAGAGAAAACTCAGGAAACCTCTGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS CCA 72 bp CCCAGGATTGATTCTGTGTGGTTCCATAAGGGTGGTTaGAGGTGTGCTATGAACAGGGTCTGGGGAATCAGA +
Preference number: 6 (lower is better)
Translates to: PRIDSVWFHKGG*RCAMNRVWGIR
Trigger: TCTGATTCCCCAGACCCTGTTCATAGCACACCTCCAACCACCCTTATGGAACCACACAGAATCAATCCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS CAA 72 bp TCTCCTGCTTTGGGTTTCCTAGGGTGCTCTCTCTTTTaGGCTGAGGATGAGGCTGAAGCCTTGTCCTTTCTC +
Preference number: 6 (lower is better)
Translates to: SPALGFLGCSLF*AEDEAEALSFL
Trigger: GAGAAAGGACAAGGCTTCAGCCTCATCCTCAGCCAAAAAGAGAGAGCACCCTAGGAAACCCAAAGCAGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS CAA 72 bp GCTAACACCTTTTGCAAACCCCTGGTAAGGGAAGCCTaGAGGGTAGGGAAGGAGAGATACTTCTCCATGTGG +
Preference number: 6 (lower is better)
Translates to: ANTFCKPLVREA*RVGKERYFSMW
Trigger: CCACATGGAGAAGTATCTCTCCTTCCCTACCCTCAAGGCTTCCCTTACCAGGGGTTTGCAAAAGGTGTTAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS CAA 90 bp TTCCTAGGGTGCTCTCTCTTTTTGGCTGAGGATGAGGCTGAAGCCTaGTCCTTTCTCTTGCCTGAGACCAGAACCTTAGAGTTTGAGGGT +
Preference number: 6 (lower is better)
Translates to: FLGCSLFLAEDEAEA*SFLLPETRTLEFEG
Trigger: ACCCTCAAACTCTAAGGTTCTGGTCTCAGGCAAGAGAAAGGACAAGGCTTCAGCCTCATCCTCAGCCAAAAAGAGAGAGCACCCTAGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS CAA 72 bp AACTGGGTCTGCAGGGACCCAAATATTTTCTCTACTTaGCATGCCCTTCCATGGTGTCTCAGATGCTGGTGG +
Preference number: 6 (lower is better)
Translates to: NWVCRDPNIFST*HALPWCLRCWW
Trigger: CCACCAGCATCTGAGACACCATGGAAGGGCATGCAAAGTAGAGAAAATATTTGGGTCCCTGCAGACCCAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS CAA 72 bp CATGTAGCTTCTGATGTAGCGAGGCATTCCCCAGGATaGATTCTGTGTGGTTCCATAAGGGTGGTTGGAGGT +
Preference number: 6 (lower is better)
Translates to: HVASDVARHSPG*ILCGSIRVVGG
Trigger: ACCTCCAACCACCCTTATGGAACCACACAGAATCAATCCTGGGGAATGCCTCGCTACATCAGAAGCTACATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS CAA 72 bp TTGGCTGAGGATGAGGCTGAAGCCTTGTCCTTTCTCTaGCCTGAGACCAGAACCTTAGAGTTTGAGGGTTCT +
Preference number: 6 (lower is better)
Translates to: LAEDEAEALSFL*PETRTLEFEGS
Trigger: AGAACCCTCAAACTCTAAGGTTCTGGTCTCAGGCAAGAGAAAGGACAAGGCTTCAGCCTCATCCTCAGCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS CAA 72 bp TGCTCTCTCTTTTTGGCTGAGGATGAGGCTGAAGCCTaGTCCTTTCTCTTGCCTGAGACCAGAACCTTAGAG +
Preference number: 6 (lower is better)
Translates to: CSLFLAEDEAEA*SFLLPETRTLE
Trigger: CTCTAAGGTTCTGGTCTCAGGCAAGAGAAAGGACAAGGCTTCAGCCTCATCCTCAGCCAAAAAGAGAGAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6
CDS CCA 72 bp CTGAGTTTTCTCTGCATTCCCACTGGGGCTTATATCTaGATGGATCTTCCAGGGAACTCTCTCTCTGGAGTT +
Preference number: 6 (lower is better)
Translates to: LSFLCIPTGAYI*MDLPGNSLSGV
Trigger: AACTCCAGAGAGAGAGTTCCCTGGAAGATCCATCCAGATATAAGCCCCAGTGGGAATGCAGAGAAAACTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312292.6
ENST00000354479.5
ENST00000421362.6