RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for C9ORF116 (Homo sapiens)

Ensembl gene IDs: ENSG00000160345

Ensembl transcript IDs: ENST00000371786.3, ENST00000371789.7, ENST00000371791.5, ENST00000419770.1, ENST00000429260.7

Found 171 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TTCAGGGAAGGCAGCGCAGTCTGTGCCGTCACAATCGGGCGACTGTaGGTGATGAGGGATGATGATTTTCCAGGAGGCCCTGGGGTCAGA +
Preference number: 1 (lower is better)
Translates to: FREGSAVCAVTIGRL*VMRDDDFPGGPGVR
Trigger: TCTGACCCCAGGGCCTCCTGGAAAATCATCATCCCTCATCACCCACAGTCGCCCGATTGTGACGGCACAGACTGCGCTGCCTTCCCTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371789.7
ENST00000371791.5
ENST00000429260.7
3UTR CCA 90 bp AGAGGACTCCTAGAGGGAGTTTCCAGCCCCTCAATCGCAGATGGATaGCCTGTTGATGTTGTAACTGGGGTGGAAGTTGAGCCGGTCACA +
Preference number: 1 (lower is better)
Translates to: RGLLEGVSSPSIADG*PVDVVTGVEVEPVT
Trigger: TGTGACCGGCTCAACTTCCACCCCAGTTACAACATCAACAGGCCATCCATCTGCGATTGAGGGGCTGGAAACTCCCTCTAGGAGTCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371789.7
ENST00000371791.5
3UTR-3UTR TCA 90 bp CCAGGAGGCCCTGGGGTCAGAGGACTCCTAGAGGGAGTTTCCAGCCCCTCAATCGCCGGTCACAGGAGGTaGTGCAGTTATCGGGGCCAG +
Preference number: 2 (lower is better)
Translates to: PGGPGVRGLLEGVSSPSIAGHRR*CSYRGQ
Trigger: CTGGCCCCGATAACTGCATCACCTCCTGTGACCGGC...GATTGAGGGGCTGGAAACTCCCTCTAGGAGTCCTCTGACCCCAGGGCCTCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371789.7
ENST00000371791.5
3UTR-3UTR TCA 90 bp CAGGATGTGACAACGTTTTTAATGCAAAGTCAACCATTAGCATCTTTCCCATGTGCCGGTCACAGGAGGTaGTGCAGTTATCGGGGCCAG +
Preference number: 2 (lower is better)
Translates to: QDVTTFLMQSQPLASFPCAGHRR*CSYRGQ
Trigger: CTGGCCCCGATAACTGCATCACCTCCTGTGACCGGC...ACATGGGAAAGATGCTAATGGTTGACTTTGCATTAAAAACGTTGTCACATCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371789.7
ENST00000371791.5
3UTR-3UTR CCA 90 bp CCGTTTGCATATTTTCCTACTCCGCAGACGAATAATATTTTCAGGGAAGGCAGCTTTTCCAGGAGGCCCTaGGGTCAGAGGACTCCTAGA +
Preference number: 2 (lower is better)
Translates to: PFAYFPTPQTNNIFREGSFSRRP*GQRTPR
Trigger: TCTAGGAGTCCTCTGACCCCAGGGCCTCCTGGAAAA...GCTGCCTTCCCTGAAAATATTATTCGTCTGCGGAGTAGGAAAATATGCAAACGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371789.7
ENST00000371791.5
ENST00000429260.7
3UTR-3UTR CCA 90 bp ATCTTTCCCATGTACTTATTAGATGTGAAATGGCAGGACTTCACGGCCCCGTTTACAATCGGGCGACTGTaGGTGATGAGGGATGATGAT +
Preference number: 2 (lower is better)
Translates to: IFPMYLLDVKWQDFTAPFTIGRL*VMRDDD
Trigger: ATCATCATCCCTCATCACCCACAGTCGCCCGATTGT...AAACGGGGCCGTGAAGTCCTGCCATTTCACATCTAATAAGTACATGGGAAAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371789.7
ENST00000371791.5
ENST00000429260.7
3UTR-3UTR CCA 90 bp ATTTTCCTACTCCGCAGACGAATAATATTTTCAGGGAAGGCAGCGCAGTCTGTGTCAATCGCAGATGGATaGCCTGTTGATGTTGTAACT +
Preference number: 2 (lower is better)
Translates to: IFLLRRRIIFSGKAAQSVSIADG*PVDVVT
Trigger: AGTTACAACATCAACAGGCCATCCATCTGCGATTGA...CACAGACTGCGCTGCCTTCCCTGAAAATATTATTCGTCTGCGGAGTAGGAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371789.7
ENST00000371791.5
3UTR-3UTR CCA 90 bp GATGTGACAACGTTTTTAATGCAAAGTCAACCATTAGCATCTTTCCCATGTACTTCAATCGCAGATGGATaGCCTGTTGATGTTGTAACT +
Preference number: 2 (lower is better)
Translates to: DVTTFLMQSQPLASFPCTSIADG*PVDVVT
Trigger: AGTTACAACATCAACAGGCCATCCATCTGCGATTGA...AGTACATGGGAAAGATGCTAATGGTTGACTTTGCATTAAAAACGTTGTCACATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371789.7
ENST00000371791.5
3UTR CCA 72 bp GGCAGCGCAGTCTGTGCCGTCACAATCGGGCGACTGTaGGTGATGAGGGATGATGATTTTCCAGGAGGCCCT +
Preference number: 3 (lower is better)
Translates to: GSAVCAVTIGRL*VMRDDDFPGGP
Trigger: AGGGCCTCCTGGAAAATCATCATCCCTCATCACCCACAGTCGCCCGATTGTGACGGCACAGACTGCGCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371789.7
ENST00000371791.5
ENST00000429260.7
3UTR CCA 72 bp CTAGAGGGAGTTTCCAGCCCCTCAATCGCAGATGGATaGCCTGTTGATGTTGTAACTGGGGTGGAAGTTGAG +
Preference number: 3 (lower is better)
Translates to: LEGVSSPSIADG*PVDVVTGVEVE
Trigger: CTCAACTTCCACCCCAGTTACAACATCAACAGGCCATCCATCTGCGATTGAGGGGCTGGAAACTCCCTCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371789.7
ENST00000371791.5
CDS-3UTR TCA 90 bp GGAAGGCAGCGCAGTCTGTGCCGTCACAATCGGGCGACTGTGGGTGATGAGGGAACCACCCCGGGTTGTTaGACCTGCCCGGCAGGTCCG +
Preference number: 4 (lower is better)
Translates to: GRQRSLCRHNRATVGDEGTTPGC*TCPAGP
Trigger: CGGACCTGCCGGGCAGGTTCAACAACCCGGGGTGGT...TCCCTCATCACCCACAGTCGCCCGATTGTGACGGCACAGACTGCGCTGCCTTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371789.7
ENST00000371791.5
ENST00000429260.7
CDS-3UTR CCA 90 bp CCTGGGGTCAGAGGACTCCTAGAGGGAGTTTCCAGCCCCTCAATCGCAGATGGAGCAGGGCGAGGACCGTaGCTCCACTCCCCGCCCGAG +
Preference number: 4 (lower is better)
Translates to: PGVRGLLEGVSSPSIADGAGRGP*LHSPPE
Trigger: CTCGGGCGGGGAGTGGAGCCACGGTCCTCGCCCTGC...TCCATCTGCGATTGAGGGGCTGGAAACTCCCTCTAGGAGTCCTCTGACCCCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371789.7
CDS-3UTR TCA 90 bp CCTGGGGTCAGAGGACTCCTAGAGGGAGTTTCCAGCCCCTCAATCGCAGATGGAGACGGCCAGGTCACGTaGCTGGGGAGCGAGCGGAGG +
Preference number: 4 (lower is better)
Translates to: PGVRGLLEGVSSPSIADGDGQVT*LGSERR
Trigger: CCTCCGCTCGCTCCCCAGTCACGTGACCTGGCCGTC...TCCATCTGCGATTGAGGGGCTGGAAACTCCCTCTAGGAGTCCTCTGACCCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371789.7
CDS-3UTR GCA 90 bp GAAGGCAGCGCAGTCTGTGCCGTCACAATCGGGCGACTGTGGGTGATGAGGGATTGGGCCGGGTTCCTCTaGGGGTGGGTCCGGAACCTG +
Preference number: 4 (lower is better)
Translates to: EGSAVCAVTIGRLWVMRDWAGFL*GWVRNL
Trigger: CAGGTTCCGGACCCACCCGCAGAGGAACCCGGCCCA...ATCCCTCATCACCCACAGTCGCCCGATTGTGACGGCACAGACTGCGCTGCCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371789.7
CDS-3UTR CCA 90 bp CTGTGGGTGATGAGGGATGATGATTTTCCAGGAGGCCCTGGGGTCAGAGGACTCTCTCCGGCGGGGCCGTaGCCTTGGGCGCCACAGGCT +
Preference number: 4 (lower is better)
Translates to: LWVMRDDDFPGGPGVRGLSPAGP*PWAPQA
Trigger: AGCCTGTGGCGCCCAAGGCCACGGCCCCGCCGGAGA...GAGTCCTCTGACCCCAGGGCCTCCTGGAAAATCATCATCCCTCATCACCCACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371789.7
ENST00000371791.5
ENST00000429260.7
CDS-3UTR GCA 90 bp GGATGGCCTGTTGATGTTGTAACTGGGGTGGAAGTTGAGCCGGTCACAGGAGGTGGTGGGTCCGGAACCTaGCGGGCGACTCCCCAAGGG +
Preference number: 4 (lower is better)
Translates to: GWPVDVVTGVEVEPVTGGGGSGT*RATPQG
Trigger: CCCTTGGGGAGTCGCCCGGCAGGTTCCGGACCCACC...ACCTCCTGTGACCGGCTCAACTTCCACCCCAGTTACAACATCAACAGGCCATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371789.7
CDS-3UTR CCA 90 bp GCAGTCTGTGCCGTCACAATCGGGCGACTGTGGGTGATGAGGGATGATGATTTTTCTCCGGCGGGGCCGTaGCCTTGGGCGCCACAGGCT +
Preference number: 4 (lower is better)
Translates to: AVCAVTIGRLWVMRDDDFSPAGP*PWAPQA
Trigger: AGCCTGTGGCGCCCAAGGCCACGGCCCCGCCGGAGA...AAAATCATCATCCCTCATCACCCACAGTCGCCCGATTGTGACGGCACAGACTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371789.7
ENST00000371791.5
ENST00000429260.7
CDS-3UTR TCA 90 bp GTAACTGGGGTGGAAGTTGAGCCGGTCACAGGAGGTGATGCAGTTATCGGGGCCGCCGGTCACAGGAGGTaGTGCAGTTATCGGGGCCAG +
Preference number: 4 (lower is better)
Translates to: VTGVEVEPVTGGDAVIGAAGHRR*CSYRGQ
Trigger: CTGGCCCCGATAACTGCATCACCTCCTGTGACCGGC...GGCCCCGATAACTGCATCACCTCCTGTGACCGGCTCAACTTCCACCCCAGTTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371789.7
ENST00000371791.5
ENST00000419770.1
CDS-3UTR GCA 90 bp CCTGGGGTCAGAGGACTCCTAGAGGGAGTTTCCAGCCCCTCAATCGCAGATGGACGGCGAGAGATTCCCTaGTGGGACCGTCGTGTGAGG +
Preference number: 4 (lower is better)
Translates to: PGVRGLLEGVSSPSIADGRREIP*WDRRVR
Trigger: CCTCACACGACGGTCCCAGCAGGGAATCTCTCGCCG...TCCATCTGCGATTGAGGGGCTGGAAACTCCCTCTAGGAGTCCTCTGACCCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371789.7
CDS-3UTR GCA 90 bp GTAACTGGGGTGGAAGTTGAGCCGGTCACAGGAGGTGATGCAGTTATCGGGGCCGCACGGTGGGGGCTCTaGTCCCGTAAGCCTGGTTAC +
Preference number: 4 (lower is better)
Translates to: VTGVEVEPVTGGDAVIGAARWGL*SRKPGY
Trigger: GTAACCAGGCTTACGGGAGCAGAGCCCCCACCGTGC...GGCCCCGATAACTGCATCACCTCCTGTGACCGGCTCAACTTCCACCCCAGTTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000371789.7
ENST00000371791.5
ENST00000419770.1
CDS-3UTR GCA 90 bp GATGATTTTCCAGGAGGCCCTGGGGTCAGAGGACTCCTAGAGGGAGTTTCCAGCACCCGAGGCATCTCGTaGACGGTGGGGGCTCTGCTC +
Preference number: 4 (lower is better)
Translates to: DDFPGGPGVRGLLEGVSSTRGIS*TVGALL
Trigger: GAGCAGAGCCCCCACCGTGCACGAGATGCCTCGGGT...GCTGGAAACTCCCTCTAGGAGTCCTCTGACCCCAGGGCCTCCTGGAAAATCATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371789.7
ENST00000371791.5
CDS-3UTR GCA 90 bp GAAGGCAGCGCAGTCTGTGCCGTCACAATCGGGCGACTGTGGGTGATGAGGGATAGGCAGCGCAGTCTGTaGCGTCACAATCGGGCGACT +
Preference number: 4 (lower is better)
Translates to: EGSAVCAVTIGRLWVMRDRQRSL*RHNRAT
Trigger: AGTCGCCCGATTGTGACGGCACAGACTGCGCTGCCT...ATCCCTCATCACCCACAGTCGCCCGATTGTGACGGCACAGACTGCGCTGCCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371789.7
ENST00000371791.5
ENST00000429260.7
CDS-3UTR TCA 90 bp CCTGTTGATGTTGTAACTGGGGTGGAAGTTGAGCCGGTCACAGGAGGTGATGCAACCACCCCGGGTTGTTaGACCTGCCCGGCAGGTCCG +
Preference number: 4 (lower is better)
Translates to: PVDVVTGVEVEPVTGGDATTPGC*TCPAGP
Trigger: CGGACCTGCCGGGCAGGTTCAACAACCCGGGGTGGT...TGCATCACCTCCTGTGACCGGCTCAACTTCCACCCCAGTTACAACATCAACAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371789.7
ENST00000371791.5
CDS-3UTR GCA 90 bp GGCAGCGCAGTCTGTGCCGTCACAATCGGGCGACTGTGGGTGATGAGGGATGATTGGAGAGCGAGAGGTTaGGCAGGACGTGGTTCACAG +
Preference number: 4 (lower is better)
Translates to: GSAVCAVTIGRLWVMRDDWRARG*AGRGSQ
Trigger: CTGTGAACCACGTCCTGCGCAACCTCTCGCTCTCCA...ATCATCCCTCATCACCCACAGTCGCCCGATTGTGACGGCACAGACTGCGCTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371789.7
CDS-3UTR GCA 90 bp CTGTGGGTGATGAGGGATGATGATTTTCCAGGAGGCCCTGGGGTCAGAGGACTCGCACGGTGGGGGCTCTaGTCCCGTAAGCCTGGTTAC +
Preference number: 4 (lower is better)
Translates to: LWVMRDDDFPGGPGVRGLARWGL*SRKPGY
Trigger: GTAACCAGGCTTACGGGAGCAGAGCCCCCACCGTGC...GAGTCCTCTGACCCCAGGGCCTCCTGGAAAATCATCATCCCTCATCACCCACAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000371789.7
ENST00000371791.5
ENST00000429260.7
CDS-3UTR GCA 90 bp GTTGTAACTGGGGTGGAAGTTGAGCCGGTCACAGGAGGTGATGCAGTTATCGGGACCCGAGGCATCTCGTaGACGGTGGGGGCTCTGCTC +
Preference number: 4 (lower is better)
Translates to: VVTGVEVEPVTGGDAVIGTRGIS*TVGALL
Trigger: GAGCAGAGCCCCCACCGTGCACGAGATGCCTCGGGT...CCCGATAACTGCATCACCTCCTGTGACCGGCTCAACTTCCACCCCAGTTACAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371789.7
ENST00000371791.5
ENST00000419770.1
CDS-3UTR CCA 90 bp GATGTTGTAACTGGGGTGGAAGTTGAGCCGGTCACAGGAGGTGATGCAGTTATCGGGTTCCTCTGCGGGTaGGTCCGGAACCTGCCGGGC +
Preference number: 4 (lower is better)
Translates to: DVVTGVEVEPVTGGDAVIGFLCG*VRNLPG
Trigger: GCCCGGCAGGTTCCGGACCCACCCGCAGAGGAACCC...GATAACTGCATCACCTCCTGTGACCGGCTCAACTTCCACCCCAGTTACAACATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371789.7
CDS-3UTR CCA 90 bp CTGTGGGTGATGAGGGATGATGATTTTCCAGGAGGCCCTGGGGTCAGAGGACTCGCTCCGCGCACGCTCTaGGGCATTCCTCAGCCATTG +
Preference number: 4 (lower is better)
Translates to: LWVMRDDDFPGGPGVRGLAPRTL*GIPQPL
Trigger: CAATGGCTGAGGAATGCCCCAGAGCGTGCGCGGAGC...GAGTCCTCTGACCCCAGGGCCTCCTGGAAAATCATCATCCCTCATCACCCACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371789.7
ENST00000371791.5
ENST00000429260.7
CDS-3UTR CCA 90 bp GATGTGAAATGGCAGGACTTCACGGCCCCGTTTGCATATTTTCCTACTCCGCAGCGCGGTAGTAGTCGCTaGTCCTCTCCGGCGGGGCCG +
Preference number: 4 (lower is better)
Translates to: DVKWQDFTAPFAYFPTPQRGSSR*SSPAGP
Trigger: CGGCCCCGCCGGAGAGGACCAGCGACTACTACCGCG...CTGCGGAGTAGGAAAATATGCAAACGGGGCCGTGAAGTCCTGCCATTTCACATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371789.7
ENST00000371791.5
ENST00000429260.7
CDS-3UTR GCA 90 bp GATGATTTTCCAGGAGGCCCTGGGGTCAGAGGACTCCTAGAGGGAGTTTCCAGCAGGCAGCGCAGTCTGTaGCGTCACAATCGGGCGACT +
Preference number: 4 (lower is better)
Translates to: DDFPGGPGVRGLLEGVSSRQRSL*RHNRAT
Trigger: AGTCGCCCGATTGTGACGGCACAGACTGCGCTGCCT...GCTGGAAACTCCCTCTAGGAGTCCTCTGACCCCAGGGCCTCCTGGAAAATCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371789.7
ENST00000371791.5
ENST00000429260.7
CDS-3UTR CCA 90 bp AGATGTGAAATGGCAGGACTTCACGGCCCCGTTTGCATATTTTCCTACTCCGCAGCCAGGTCACGTGACTaGGGAGCGAGCGGAGGGGCC +
Preference number: 4 (lower is better)
Translates to: RCEMAGLHGPVCIFSYSAARSRD*GASGGA
Trigger: GGCCCCTCCGCTCGCTCCCCAGTCACGTGACCTGGC...TGCGGAGTAGGAAAATATGCAAACGGGGCCGTGAAGTCCTGCCATTTCACATCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371789.7
CDS-3UTR CCA 90 bp TTCAGGGAAGGCAGCGCAGTCTGTGCCGTCACAATCGGGCGACTGTGGGTGATGTTTTCCAGGAGGCCCTaGGGTCAGAGGACTCCTAGA +
Preference number: 4 (lower is better)
Translates to: FREGSAVCAVTIGRLWVMFSRRP*GQRTPR
Trigger: TCTAGGAGTCCTCTGACCCCAGGGCCTCCTGGAAAA...CATCACCCACAGTCGCCCGATTGTGACGGCACAGACTGCGCTGCCTTCCCTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371789.7
ENST00000371791.5
ENST00000429260.7
CDS-3UTR GCA 90 bp CCCATGTACTTATTAGATGTGAAATGGCAGGACTTCACGGCCCCGTTTGCATATCAGGGCGGGGCGAGCTaGAGGGCGAGGACCGTGGCT +
Preference number: 4 (lower is better)
Translates to: PMYLLDVKWQDFTAPFAYQGGAS*RARTVA
Trigger: AGCCACGGTCCTCGCCCTGCAGCTCGCCCCGCCCTG...ATATGCAAACGGGGCCGTGAAGTCCTGCCATTTCACATCTAATAAGTACATGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371789.7
CDS-3UTR GCA 90 bp GGAAGGCAGCGCAGTCTGTGCCGTCACAATCGGGCGACTGTGGGTGATGAGGGACTTCACGGCCCCGTTTaGATATTTTCCTACTCCGCA +
Preference number: 4 (lower is better)
Translates to: GRQRSLCRHNRATVGDEGLHGPV*IFSYSA
Trigger: TGCGGAGTAGGAAAATATGCAAACGGGGCCGTGAAG...TCCCTCATCACCCACAGTCGCCCGATTGTGACGGCACAGACTGCGCTGCCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371789.7
ENST00000371791.5
ENST00000429260.7
CDS-3UTR CCA 90 bp GGATGGCCTGTTGATGTTGTAACTGGGGTGGAAGTTGAGCCGGTCACAGGAGGTCTCAGCCATTGTGCCTaGAGGAGAAGCGGGACTCGG +
Preference number: 4 (lower is better)
Translates to: GWPVDVVTGVEVEPVTGGLSHCA*RRSGTR
Trigger: CCGAGTCCCGCTTCTCCTCCAGGCACAATGGCTGAG...ACCTCCTGTGACCGGCTCAACTTCCACCCCAGTTACAACATCAACAGGCCATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371789.7
ENST00000371791.5
CDS-3UTR CCA 90 bp GAAGGCAGCGCAGTCTGTGCCGTCACAATCGGGCGACTGTGGGTGATGAGGGATCGTAAGCCTGGTTACTaGTCCTGTACACGGAGACAG +
Preference number: 4 (lower is better)
Translates to: EGSAVCAVTIGRLWVMRDRKPGY*SCTRRQ
Trigger: CTGTCTCCGTGTACAGGACCAGTAACCAGGCTTACG...ATCCCTCATCACCCACAGTCGCCCGATTGTGACGGCACAGACTGCGCTGCCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371789.7
ENST00000371791.5
ENST00000429260.7
CDS-3UTR CCA 90 bp CATCTTTCCCATGTACTTATTAGATGTGAAATGGCAGGACTTCACGGCCCCGTTAGGGGCCTCCCGGGCTaGCCGGTCCCATTAGCAGGG +
Preference number: 4 (lower is better)
Translates to: HLSHVLIRCEMAGLHGPVRGLPG*PVPLAG
Trigger: CCCTGCTAATGGGACCGGCCAGCCCGGGAGGCCCCT...AACGGGGCCGTGAAGTCCTGCCATTTCACATCTAATAAGTACATGGGAAAGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371789.7
CDS-3UTR CCA 90 bp TCCCATGTACTTATTAGATGTGAAATGGCAGGACTTCACGGCCCCGTTTGCATAAGAAACCCCAGGGCCTaGGACCCCGCCAGCCGGGTG +
Preference number: 4 (lower is better)
Translates to: SHVLIRCEMAGLHGPVCIRNPRA*DPASRV
Trigger: CACCCGGCTGGCGGGGTCCCAGGCCCTGGGGTTTCT...TATGCAAACGGGGCCGTGAAGTCCTGCCATTTCACATCTAATAAGTACATGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371789.7
CDS-3UTR CCA 90 bp GATGTTGTAACTGGGGTGGAAGTTGAGCCGGTCACAGGAGGTGATGCAGTTATCGCTCCGCGCACGCTCTaGGGCATTCCTCAGCCATTG +
Preference number: 4 (lower is better)
Translates to: DVVTGVEVEPVTGGDAVIAPRTL*GIPQPL
Trigger: CAATGGCTGAGGAATGCCCCAGAGCGTGCGCGGAGC...GATAACTGCATCACCTCCTGTGACCGGCTCAACTTCCACCCCAGTTACAACATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371789.7
ENST00000371791.5
CDS-3UTR CCA 90 bp CCCATGTACTTATTAGATGTGAAATGGCAGGACTTCACGGCCCCGTTTGCATATCGCGGTAGTAGTCGCTaGTCCTCTCCGGCGGGGCCG +
Preference number: 4 (lower is better)
Translates to: PMYLLDVKWQDFTAPFAYRGSSR*SSPAGP
Trigger: CGGCCCCGCCGGAGAGGACCAGCGACTACTACCGCG...ATATGCAAACGGGGCCGTGAAGTCCTGCCATTTCACATCTAATAAGTACATGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371789.7
ENST00000371791.5
ENST00000429260.7
CDS-3UTR CCA 90 bp GTTGTAACTGGGGTGGAAGTTGAGCCGGTCACAGGAGGTGATGCAGTTATCGGGGTCGGGATCAGAACCTaGCTCCAGCCCTCTGTTTCC +
Preference number: 4 (lower is better)
Translates to: VVTGVEVEPVTGGDAVIGVGIRT*LQPSVS
Trigger: GGAAACAGAGGGCTGGAGCCAGGTTCTGATCCCGAC...CCCGATAACTGCATCACCTCCTGTGACCGGCTCAACTTCCACCCCAGTTACAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371791.5
CDS-3UTR TCA 90 bp GGCAGGACTTCACGGCCCCGTTTGCATATTTTCCTACTCCGCAGACGAATAATAGCCGGTCACAGGAGGTaGTGCAGTTATCGGGGCCAG +
Preference number: 4 (lower is better)
Translates to: GRTSRPRLHIFLLRRRIIAGHRR*CSYRGQ
Trigger: CTGGCCCCGATAACTGCATCACCTCCTGTGACCGGC...TATTATTCGTCTGCGGAGTAGGAAAATATGCAAACGGGGCCGTGAAGTCCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371789.7
ENST00000371791.5
ENST00000429260.7
CDS-3UTR TCA 90 bp GTAACTGGGGTGGAAGTTGAGCCGGTCACAGGAGGTGATGCAGTTATCGGGGCCACAAATCAGTGGAGCTaGGACCACAACTGGGCTTTC +
Preference number: 4 (lower is better)
Translates to: VTGVEVEPVTGGDAVIGATNQWS*DHNWAF
Trigger: GAAAGCCCAGTTGTGGTCTCAGCTCCACTGATTTGT...GGCCCCGATAACTGCATCACCTCCTGTGACCGGCTCAACTTCCACCCCAGTTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419770.1
CDS-3UTR GCA 90 bp GTAACTGGGGTGGAAGTTGAGCCGGTCACAGGAGGTGATGCAGTTATCGGGGCCCGGGGCCAGTCACGATaGTTTTCTCCAGGTAAACAT +
Preference number: 4 (lower is better)
Translates to: VTGVEVEPVTGGDAVIGARGQSR*FSPGKH
Trigger: ATGTTTACCTGGAGAAAAGCATCGTGACTGGCCCCG...GGCCCCGATAACTGCATCACCTCCTGTGACCGGCTCAACTTCCACCCCAGTTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000371789.7
ENST00000371791.5
ENST00000419770.1
CDS-3UTR CCA 90 bp CGTTTGCATATTTTCCTACTCCGCAGACGAATAATATTTTCAGGGAAGGCAGCGCGCGGTAGTAGTCGCTaGTCCTCTCCGGCGGGGCCG +
Preference number: 4 (lower is better)
Translates to: RLHIFLLRRRIIFSGKAARGSSR*SSPAGP
Trigger: CGGCCCCGCCGGAGAGGACCAGCGACTACTACCGCG...CGCTGCCTTCCCTGAAAATATTATTCGTCTGCGGAGTAGGAAAATATGCAAACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371789.7
ENST00000371791.5
ENST00000429260.7
CDS-3UTR CCA 90 bp GGATGGCCTGTTGATGTTGTAACTGGGGTGGAAGTTGAGCCGGTCACAGGAGGTTTTTCCAGGAGGCCCTaGGGTCAGAGGACTCCTAGA +
Preference number: 4 (lower is better)
Translates to: GWPVDVVTGVEVEPVTGGFSRRP*GQRTPR
Trigger: TCTAGGAGTCCTCTGACCCCAGGGCCTCCTGGAAAA...ACCTCCTGTGACCGGCTCAACTTCCACCCCAGTTACAACATCAACAGGCCATCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371789.7
ENST00000371791.5
CDS-3UTR CCA 90 bp GAAGGCAGCGCAGTCTGTGCCGTCACAATCGGGCGACTGTGGGTGATGAGGGATTTATTAGATGTGAAATaGCAGGACTTCACGGCCCCG +
Preference number: 4 (lower is better)
Translates to: EGSAVCAVTIGRLWVMRDLLDVK*QDFTAP
Trigger: CGGGGCCGTGAAGTCCTGCCATTTCACATCTAATAA...ATCCCTCATCACCCACAGTCGCCCGATTGTGACGGCACAGACTGCGCTGCCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371789.7
ENST00000371791.5
ENST00000429260.7
CDS-3UTR TCA 90 bp ATTAGATGTGAAATGGCAGGACTTCACGGCCCCGTTTGCATATTTTCCTACTCCGACGGCCAGGTCACGTaGCCAGGAGCAAGGTCGGGA +
Preference number: 4 (lower is better)
Translates to: IRCEMAGLHGPVCIFSYSDGQVT*PGARSG
Trigger: TCCCGACCTTGCTCCTGGTCACGTGACCTGGCCGTC...GGAGTAGGAAAATATGCAAACGGGGCCGTGAAGTCCTGCCATTTCACATCTAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371791.5
CDS-3UTR GCA 90 bp ATTTTCCTACTCCGCAGACGAATAATATTTTCAGGGAAGGCAGCGCAGTCTGTGTCGGCGGCGTCCTGTTaGCAAGCGACGGCCAGGTCA +
Preference number: 4 (lower is better)
Translates to: IFLLRRRIIFSGKAAQSVSAASC*QATARS
Trigger: TGACCTGGCCGTCGCTTGGCAACAGGACGCCGCCGA...CACAGACTGCGCTGCCTTCCCTGAAAATATTATTCGTCTGCGGAGTAGGAAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371789.7
ENST00000371791.5
CDS-3UTR GCA 90 bp TCCCATGTACTTATTAGATGTGAAATGGCAGGACTTCACGGCCCCGTTTGCATAACCCGAGGCATCTCGTaGACGGTGGGGGCTCTGCTC +
Preference number: 4 (lower is better)
Translates to: SHVLIRCEMAGLHGPVCITRGIS*TVGALL
Trigger: GAGCAGAGCCCCCACCGTGCACGAGATGCCTCGGGT...TATGCAAACGGGGCCGTGAAGTCCTGCCATTTCACATCTAATAAGTACATGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371789.7
ENST00000371791.5
CDS-3UTR GCA 90 bp CTGTGGGTGATGAGGGATGATGATTTTCCAGGAGGCCCTGGGGTCAGAGGACTCCGGGGCCAGTCACGATaGTTTTCTCCAGGTAAACAT +
Preference number: 4 (lower is better)
Translates to: LWVMRDDDFPGGPGVRGLRGQSR*FSPGKH
Trigger: ATGTTTACCTGGAGAAAAGCATCGTGACTGGCCCCG...GAGTCCTCTGACCCCAGGGCCTCCTGGAAAATCATCATCCCTCATCACCCACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000371789.7
ENST00000371791.5
ENST00000429260.7
CDS-3UTR CCA 90 bp GGCAGGACTTCACGGCCCCGTTTGCATATTTTCCTACTCCGCAGACGAATAATACCCAGCATCAGGGCGTaGACTCCCGGGCGAAAGAAA +
Preference number: 4 (lower is better)
Translates to: GRTSRPRLHIFLLRRRIIPSIRA*TPGRKK
Trigger: TTTCTTTCGCCCGGGAGTCCACGCCCTGATGCTGGG...TATTATTCGTCTGCGGAGTAGGAAAATATGCAAACGGGGCCGTGAAGTCCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371789.7
CDS-3UTR CCA 90 bp GTTGTAACTGGGGTGGAAGTTGAGCCGGTCACAGGAGGTGATGCAGTTATCGGGCGTAAGCCTGGTTACTaGTCCTGTACACGGAGACAG +
Preference number: 4 (lower is better)
Translates to: VVTGVEVEPVTGGDAVIGRKPGY*SCTRRQ
Trigger: CTGTCTCCGTGTACAGGACCAGTAACCAGGCTTACG...CCCGATAACTGCATCACCTCCTGTGACCGGCTCAACTTCCACCCCAGTTACAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371789.7
ENST00000371791.5
ENST00000419770.1
CDS-3UTR CCA 90 bp GTTGTAACTGGGGTGGAAGTTGAGCCGGTCACAGGAGGTGATGCAGTTATCGGGACGGAGACAGCCTTCTaGGTCCCGACACAAATCAGT +
Preference number: 4 (lower is better)
Translates to: VVTGVEVEPVTGGDAVIGTETAF*VPTQIS
Trigger: ACTGATTTGTGTCGGGACCCAGAAGGCTGTCTCCGT...CCCGATAACTGCATCACCTCCTGTGACCGGCTCAACTTCCACCCCAGTTACAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419770.1
CDS-3UTR TCA 90 bp AAGTCAACCATTAGCATCTTTCCCATGTACTTATTAGATGTGAAATGGCAGGACGCTGGGACCGTCGTGTaGGGCAGCCCCAGGCCCCCA +
Preference number: 4 (lower is better)
Translates to: KSTISIFPMYLLDVKWQDAGTVV*GSPRPP
Trigger: TGGGGGCCTGGGGCTGCCTCACACGACGGTCCCAGC...GTCCTGCCATTTCACATCTAATAAGTACATGGGAAAGATGCTAATGGTTGACTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371789.7
CDS-3UTR TCA 90 bp CATCTTTCCCATGTACTTATTAGATGTGAAATGGCAGGACTTCACGGCCCCGTTGCCGGTCACAGGAGGTaGTGCAGTTATCGGGGCCAG +
Preference number: 4 (lower is better)
Translates to: HLSHVLIRCEMAGLHGPVAGHRR*CSYRGQ
Trigger: CTGGCCCCGATAACTGCATCACCTCCTGTGACCGGC...AACGGGGCCGTGAAGTCCTGCCATTTCACATCTAATAAGTACATGGGAAAGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371789.7
ENST00000371791.5
ENST00000429260.7
CDS-3UTR TCA 90 bp ATTAGATGTGAAATGGCAGGACTTCACGGCCCCGTTTGCATATTTTCCTACTCCGCCGGTCACAGGAGGTaGTGCAGTTATCGGGGCCAG +
Preference number: 4 (lower is better)
Translates to: IRCEMAGLHGPVCIFSYSAGHRR*CSYRGQ
Trigger: CTGGCCCCGATAACTGCATCACCTCCTGTGACCGGC...GGAGTAGGAAAATATGCAAACGGGGCCGTGAAGTCCTGCCATTTCACATCTAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371789.7
ENST00000371791.5
ENST00000429260.7
CDS-3UTR GCA 90 bp CATCTTTCCCATGTACTTATTAGATGTGAAATGGCAGGACTTCACGGCCCCGTTGCACGGTGGGGGCTCTaGTCCCGTAAGCCTGGTTAC +
Preference number: 4 (lower is better)
Translates to: HLSHVLIRCEMAGLHGPVARWGL*SRKPGY
Trigger: GTAACCAGGCTTACGGGAGCAGAGCCCCCACCGTGC...AACGGGGCCGTGAAGTCCTGCCATTTCACATCTAATAAGTACATGGGAAAGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371789.7
ENST00000371791.5
ENST00000429260.7
CDS-3UTR GCA 90 bp AGATGTGAAATGGCAGGACTTCACGGCCCCGTTTGCATATTTTCCTACTCCGCAACTTTAGGCATCTCGTaGACGGTGGGGGCTCTGCTC +
Preference number: 4 (lower is better)
Translates to: RCEMAGLHGPVCIFSYSATLGIS*TVGALL
Trigger: GAGCAGAGCCCCCACCGTGCACGAGATGCCTAAAGT...TGCGGAGTAGGAAAATATGCAAACGGGGCCGTGAAGTCCTGCCATTTCACATCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000429260.7
CDS-3UTR CCA 90 bp GCAGTCTGTGCCGTCACAATCGGGCGACTGTGGGTGATGAGGGATGATGATTTTCGTAAGCCTGGTTACTaGTCCTGTACACGGAGACAG +
Preference number: 4 (lower is better)
Translates to: AVCAVTIGRLWVMRDDDFRKPGY*SCTRRQ
Trigger: CTGTCTCCGTGTACAGGACCAGTAACCAGGCTTACG...AAAATCATCATCCCTCATCACCCACAGTCGCCCGATTGTGACGGCACAGACTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371789.7
ENST00000371791.5
ENST00000429260.7
CDS-3UTR TCA 90 bp GTAACTGGGGTGGAAGTTGAGCCGGTCACAGGAGGTGATGCAGTTATCGGGGCCTCTCCAGGTAAACATTaGGAGTATTGTTCCGGAACA +
Preference number: 4 (lower is better)
Translates to: VTGVEVEPVTGGDAVIGASPGKH*EYCSGT
Trigger: TGTTCCGGAACAATACTCTCAATGTTTACCTGGAGA...GGCCCCGATAACTGCATCACCTCCTGTGACCGGCTCAACTTCCACCCCAGTTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371789.7
ENST00000371791.5
ENST00000419770.1
CDS-3UTR GCA 90 bp CCGTTTGCATATTTTCCTACTCCGCAGACGAATAATATTTTCAGGGAAGGCAGCACTCCAGGGATGCTATaGCCCCCAGCACCCCGAGTC +
Preference number: 4 (lower is better)
Translates to: PFAYFPTPQTNNIFREGSTPGML*PPAPRV
Trigger: GACTCGGGGTGCTGGGGGGCATAGCATCCCTGGAGT...GCTGCCTTCCCTGAAAATATTATTCGTCTGCGGAGTAGGAAAATATGCAAACGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000371789.7
CDS-3UTR CCA 90 bp GATGTTGTAACTGGGGTGGAAGTTGAGCCGGTCACAGGAGGTGATGCAGTTATCCGTAAGCCTGGTTACTaGTCCTGTACACGGAGACAG +
Preference number: 4 (lower is better)
Translates to: DVVTGVEVEPVTGGDAVIRKPGY*SCTRRQ
Trigger: CTGTCTCCGTGTACAGGACCAGTAACCAGGCTTACG...GATAACTGCATCACCTCCTGTGACCGGCTCAACTTCCACCCCAGTTACAACATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371789.7
ENST00000371791.5
CDS-3UTR CCA 90 bp GTAACTGGGGTGGAAGTTGAGCCGGTCACAGGAGGTGATGCAGTTATCGGGGCCTCAATCGCAGATGGATaGCCTGTTGATGTTGTAACT +
Preference number: 4 (lower is better)
Translates to: VTGVEVEPVTGGDAVIGASIADG*PVDVVT
Trigger: AGTTACAACATCAACAGGCCATCCATCTGCGATTGA...GGCCCCGATAACTGCATCACCTCCTGTGACCGGCTCAACTTCCACCCCAGTTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371789.7
ENST00000371791.5
CDS-3UTR TCA 90 bp AAGTCAACCATTAGCATCTTTCCCATGTACTTATTAGATGTGAAATGGCAGGACACCACCCCGGGTTGTTaGACCTGCCCGGCAGGTCCG +
Preference number: 4 (lower is better)
Translates to: KSTISIFPMYLLDVKWQDTTPGC*TCPAGP
Trigger: CGGACCTGCCGGGCAGGTTCAACAACCCGGGGTGGT...GTCCTGCCATTTCACATCTAATAAGTACATGGGAAAGATGCTAATGGTTGACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371789.7
ENST00000371791.5
ENST00000429260.7
CDS-3UTR GCA 90 bp CGTTTGCATATTTTCCTACTCCGCAGACGAATAATATTTTCAGGGAAGGCAGCGAGGCAGCGCAGTCTGTaGCGTCACAATCGGGCGACT +
Preference number: 4 (lower is better)
Translates to: RLHIFLLRRRIIFSGKAARQRSL*RHNRAT
Trigger: AGTCGCCCGATTGTGACGGCACAGACTGCGCTGCCT...CGCTGCCTTCCCTGAAAATATTATTCGTCTGCGGAGTAGGAAAATATGCAAACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371789.7
ENST00000371791.5
ENST00000429260.7
CDS-3UTR GCA 90 bp GATGTGAAATGGCAGGACTTCACGGCCCCGTTTGCATATTTTCCTACTCCGCAGCTTCACGGCCCCGTTTaGATATTTTCCTACTCCGCA +
Preference number: 4 (lower is better)
Translates to: DVKWQDFTAPFAYFPTPQLHGPV*IFSYSA
Trigger: TGCGGAGTAGGAAAATATGCAAACGGGGCCGTGAAG...CTGCGGAGTAGGAAAATATGCAAACGGGGCCGTGAAGTCCTGCCATTTCACATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000371789.7
ENST00000371791.5
ENST00000429260.7
CDS-3UTR CCA 90 bp ATCTTTCCCATGTACTTATTAGATGTGAAATGGCAGGACTTCACGGCCCCGTTTCGAGAGATTCCCTGCTaGGACCGTCGTGTGAGGCAG +
Preference number: 4 (lower is better)
Translates to: IFPMYLLDVKWQDFTAPFREIPC*DRRVRQ
Trigger: CTGCCTCACACGACGGTCCCAGCAGGGAATCTCTCG...AAACGGGGCCGTGAAGTCCTGCCATTTCACATCTAATAAGTACATGGGAAAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371789.7
CDS-3UTR CCA 90 bp AGGACTTCACGGCCCCGTTTGCATATTTTCCTACTCCGCAGACGAATAATATTTCTCAGCCATTGTGCCTaGAGGAGAAGCGGGACTCGG +
Preference number: 4 (lower is better)
Translates to: RTSRPRLHIFLLRRRIIFLSHCA*RRSGTR
Trigger: CCGAGTCCCGCTTCTCCTCCAGGCACAATGGCTGAG...AAATATTATTCGTCTGCGGAGTAGGAAAATATGCAAACGGGGCCGTGAAGTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371789.7
ENST00000371791.5
CDS-3UTR CCA 90 bp AATGCAAAGTCAACCATTAGCATCTTTCCCATGTACTTATTAGATGTGAAATGGTCTCCGGCGGGGCCGTaGCCTTGGGCGCCACAGGCT +
Preference number: 4 (lower is better)
Translates to: NAKSTISIFPMYLLDVKWSPAGP*PWAPQA
Trigger: AGCCTGTGGCGCCCAAGGCCACGGCCCCGCCGGAGA...CCATTTCACATCTAATAAGTACATGGGAAAGATGCTAATGGTTGACTTTGCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371789.7
ENST00000371791.5
ENST00000429260.7
CDS-3UTR CCA 90 bp GATGATTTTCCAGGAGGCCCTGGGGTCAGAGGACTCCTAGAGGGAGTTTCCAGCTCAATCGCAGATGGATaGCCTGTTGATGTTGTAACT +
Preference number: 4 (lower is better)
Translates to: DDFPGGPGVRGLLEGVSSSIADG*PVDVVT
Trigger: AGTTACAACATCAACAGGCCATCCATCTGCGATTGA...GCTGGAAACTCCCTCTAGGAGTCCTCTGACCCCAGGGCCTCCTGGAAAATCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371789.7
ENST00000371791.5
ENST00000429260.7
CDS-3UTR CCA 90 bp GGCAGCGCAGTCTGTGCCGTCACAATCGGGCGACTGTGGGTGATGAGGGATGATCCCGCTGCAAGTTGTTaGGAAAATTTATTCGAATTT +
Preference number: 4 (lower is better)
Translates to: GSAVCAVTIGRLWVMRDDPAASC*ENLFEF
Trigger: AAATTCGAATAAATTTTCCCAACAACTTGCAGCGGG...ATCATCCCTCATCACCCACAGTCGCCCGATTGTGACGGCACAGACTGCGCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429260.7
CDS-3UTR GCA 90 bp AAGTCAACCATTAGCATCTTTCCCATGTACTTATTAGATGTGAAATGGCAGGACTCGGCGGCGTCCTGTTaGCAAGCGACGGCCAGGTCA +
Preference number: 4 (lower is better)
Translates to: KSTISIFPMYLLDVKWQDSAASC*QATARS
Trigger: TGACCTGGCCGTCGCTTGGCAACAGGACGCCGCCGA...GTCCTGCCATTTCACATCTAATAAGTACATGGGAAAGATGCTAATGGTTGACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371789.7
ENST00000371791.5
CDS-3UTR CCA 90 bp CAGGATGTGACAACGTTTTTAATGCAAAGTCAACCATTAGCATCTTTCCCATGTGGTTCACAGCTCACTTaGCGGGAGGCGAGGGTCCCC +
Preference number: 4 (lower is better)
Translates to: QDVTTFLMQSQPLASFPCGSQLT*REARVP
Trigger: GGGGACCCTCGCCTCCCGCCAAGTGAGCTGTGAACC...ACATGGGAAAGATGCTAATGGTTGACTTTGCATTAAAAACGTTGTCACATCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371789.7
CDS-3UTR CCA 90 bp AGATGTGAAATGGCAGGACTTCACGGCCCCGTTTGCATATTTTCCTACTCCGCAACAATCGGGCGACTGTaGGTGATGAGGGATGATGAT +
Preference number: 4 (lower is better)
Translates to: RCEMAGLHGPVCIFSYSATIGRL*VMRDDD
Trigger: ATCATCATCCCTCATCACCCACAGTCGCCCGATTGT...TGCGGAGTAGGAAAATATGCAAACGGGGCCGTGAAGTCCTGCCATTTCACATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371789.7
ENST00000371791.5
ENST00000429260.7
CDS-3UTR TCA 90 bp AGGACTTCACGGCCCCGTTTGCATATTTTCCTACTCCGCAGACGAATAATATTTCAGCCCTCTGTTTCCTaGAAAGGTCCCTGTGCTTCC +
Preference number: 4 (lower is better)
Translates to: RTSRPRLHIFLLRRRIIFQPSVS*KGPCAS
Trigger: GGAAGCACAGGGACCTTTTCAGGAAACAGAGGGCTG...AAATATTATTCGTCTGCGGAGTAGGAAAATATGCAAACGGGGCCGTGAAGTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371791.5
CDS-3UTR CCA 90 bp GGATGTGACAACGTTTTTAATGCAAAGTCAACCATTAGCATCTTTCCCATGTACGCTCCGCGCACGCTCTaGGGCATTCCTCAGCCATTG +
Preference number: 4 (lower is better)
Translates to: GCDNVFNAKSTISIFPMYAPRTL*GIPQPL
Trigger: CAATGGCTGAGGAATGCCCCAGAGCGTGCGCGGAGC...GTACATGGGAAAGATGCTAATGGTTGACTTTGCATTAAAAACGTTGTCACATCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371789.7
ENST00000371791.5
ENST00000429260.7
CDS-3UTR GCA 90 bp CATCTTTCCCATGTACTTATTAGATGTGAAATGGCAGGACTTCACGGCCCCGTTCTTCACGGCCCCGTTTaGATATTTTCCTACTCCGCA +
Preference number: 4 (lower is better)
Translates to: HLSHVLIRCEMAGLHGPVLHGPV*IFSYSA
Trigger: TGCGGAGTAGGAAAATATGCAAACGGGGCCGTGAAG...AACGGGGCCGTGAAGTCCTGCCATTTCACATCTAATAAGTACATGGGAAAGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371789.7
ENST00000371791.5
ENST00000429260.7
CDS-3UTR CCA 90 bp TTTGCATATTTTCCTACTCCGCAGACGAATAATATTTTCAGGGAAGGCAGCGCATTTTCCAGGAGGCCCTaGGGTCAGAGGACTCCTAGA +
Preference number: 4 (lower is better)
Translates to: FAYFPTPQTNNIFREGSAFSRRP*GQRTPR
Trigger: TCTAGGAGTCCTCTGACCCCAGGGCCTCCTGGAAAA...TGCGCTGCCTTCCCTGAAAATATTATTCGTCTGCGGAGTAGGAAAATATGCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371789.7
ENST00000371791.5
ENST00000429260.7
CDS-3UTR CCA 90 bp CATCTTTCCCATGTACTTATTAGATGTGAAATGGCAGGACTTCACGGCCCCGTTACAATCGGGCGACTGTaGGTGATGAGGGATGATGAT +
Preference number: 4 (lower is better)
Translates to: HLSHVLIRCEMAGLHGPVTIGRL*VMRDDD
Trigger: ATCATCATCCCTCATCACCCACAGTCGCCCGATTGT...AACGGGGCCGTGAAGTCCTGCCATTTCACATCTAATAAGTACATGGGAAAGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371789.7
ENST00000371791.5
ENST00000429260.7
CDS-3UTR GCA 90 bp AAGTCAACCATTAGCATCTTTCCCATGTACTTATTAGATGTGAAATGGCAGGACACGGGGTTTAAGCACTaGAGGTCCACTCGGCAGGCA +
Preference number: 4 (lower is better)
Translates to: KSTISIFPMYLLDVKWQDTGFKH*RSTRQA
Trigger: TGCCTGCCGAGTGGACCTGCAGTGCTTAAACCCCGT...GTCCTGCCATTTCACATCTAATAAGTACATGGGAAAGATGCTAATGGTTGACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371789.7
CDS-3UTR GCA 90 bp CCGTTTGCATATTTTCCTACTCCGCAGACGAATAATATTTTCAGGGAAGGCAGCCGGGGCCAGTCACGATaGTTTTCTCCAGGTAAACAT +
Preference number: 4 (lower is better)
Translates to: PFAYFPTPQTNNIFREGSRGQSR*FSPGKH
Trigger: ATGTTTACCTGGAGAAAAGCATCGTGACTGGCCCCG...GCTGCCTTCCCTGAAAATATTATTCGTCTGCGGAGTAGGAAAATATGCAAACGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000371789.7
ENST00000371791.5
ENST00000429260.7
CDS-3UTR CCA 90 bp GGATGTGACAACGTTTTTAATGCAAAGTCAACCATTAGCATCTTTCCCATGTACAGGTTGCGCAGGACGTaGTTCACAGCTCACTTGGCG +
Preference number: 4 (lower is better)
Translates to: GCDNVFNAKSTISIFPMYRLRRT*FTAHLA
Trigger: CGCCAAGTGAGCTGTGAACCACGTCCTGCGCAACCT...GTACATGGGAAAGATGCTAATGGTTGACTTTGCATTAAAAACGTTGTCACATCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371789.7
CDS-3UTR CCA 90 bp AGGACTTCACGGCCCCGTTTGCATATTTTCCTACTCCGCAGACGAATAATATTTACAATCGGGCGACTGTaGGTGATGAGGGATGATGAT +
Preference number: 4 (lower is better)
Translates to: RTSRPRLHIFLLRRRIIFTIGRL*VMRDDD
Trigger: ATCATCATCCCTCATCACCCACAGTCGCCCGATTGT...AAATATTATTCGTCTGCGGAGTAGGAAAATATGCAAACGGGGCCGTGAAGTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371789.7
ENST00000371791.5
ENST00000429260.7
CDS-3UTR GCA 90 bp TCCCATGTACTTATTAGATGTGAAATGGCAGGACTTCACGGCCCCGTTTGCATACAACGATTGGACTTTTaGTGTCCAATGTACTCCAGG +
Preference number: 4 (lower is better)
Translates to: SHVLIRCEMAGLHGPVCIQRLDF*CPMYSR
Trigger: CCTGGAGTACATTGGACAGCAAAAGTCCAATCGTTG...TATGCAAACGGGGCCGTGAAGTCCTGCCATTTCACATCTAATAAGTACATGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371789.7
CDS-3UTR CCA 90 bp CCGTTTGCATATTTTCCTACTCCGCAGACGAATAATATTTTCAGGGAAGGCAGCTTATTAGATGTGAAATaGCAGGACTTCACGGCCCCG +
Preference number: 4 (lower is better)
Translates to: PFAYFPTPQTNNIFREGSLLDVK*QDFTAP
Trigger: CGGGGCCGTGAAGTCCTGCCATTTCACATCTAATAA...GCTGCCTTCCCTGAAAATATTATTCGTCTGCGGAGTAGGAAAATATGCAAACGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371789.7
ENST00000371791.5
ENST00000429260.7
CDS-3UTR GCA 90 bp ATTTTCCTACTCCGCAGACGAATAATATTTTCAGGGAAGGCAGCGCAGTCTGTGGAACATTCCACCCGCTaGAAGTTGTTGGGAAAATTT +
Preference number: 4 (lower is better)
Translates to: IFLLRRRIIFSGKAAQSVEHSTR*KLLGKF
Trigger: AAATTTTCCCAACAACTTGCAGCGGGTGGAATGTTC...CACAGACTGCGCTGCCTTCCCTGAAAATATTATTCGTCTGCGGAGTAGGAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000429260.7
CDS-3UTR CCA 90 bp CCCATGTACTTATTAGATGTGAAATGGCAGGACTTCACGGCCCCGTTTGCATATTCAATCGCAGATGGATaGCCTGTTGATGTTGTAACT +
Preference number: 4 (lower is better)
Translates to: PMYLLDVKWQDFTAPFAYSIADG*PVDVVT
Trigger: AGTTACAACATCAACAGGCCATCCATCTGCGATTGA...ATATGCAAACGGGGCCGTGAAGTCCTGCCATTTCACATCTAATAAGTACATGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371789.7
ENST00000371791.5
ENST00000429260.7
CDS-3UTR TCA 90 bp CCGTTTGCATATTTTCCTACTCCGCAGACGAATAATATTTTCAGGGAAGGCAGCTCTCCAGGTAAACATTaGGAGTATTGTTCCGGAACA +
Preference number: 4 (lower is better)
Translates to: PFAYFPTPQTNNIFREGSSPGKH*EYCSGT
Trigger: TGTTCCGGAACAATACTCTCAATGTTTACCTGGAGA...GCTGCCTTCCCTGAAAATATTATTCGTCTGCGGAGTAGGAAAATATGCAAACGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371789.7
ENST00000371791.5
ENST00000429260.7
CDS-3UTR CCA 90 bp AGGACTTCACGGCCCCGTTTGCATATTTTCCTACTCCGCAGACGAATAATATTTTATTACAAACAGTTTTaGAGAGCGAGAGGTTGCGCA +
Preference number: 4 (lower is better)
Translates to: RTSRPRLHIFLLRRRIIFYYKQF*RARGCA
Trigger: TGCGCAACCTCTCGCTCTCCAAAACTGTTTGTAATA...AAATATTATTCGTCTGCGGAGTAGGAAAATATGCAAACGGGGCCGTGAAGTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000371789.7
CDS-3UTR CCA 90 bp GGATGTGACAACGTTTTTAATGCAAAGTCAACCATTAGCATCTTTCCCATGTACTCGGCAGGCAACGATTaGACTTTTGCTGTCCAATGT +
Preference number: 4 (lower is better)
Translates to: GCDNVFNAKSTISIFPMYSAGND*TFAVQC
Trigger: ACATTGGACAGCAAAAGTCCAATCGTTGCCTGCCGA...GTACATGGGAAAGATGCTAATGGTTGACTTTGCATTAAAAACGTTGTCACATCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371789.7
CDS-3UTR GCA 90 bp AATGCAAAGTCAACCATTAGCATCTTTCCCATGTACTTATTAGATGTGAAATGGCGGGGCCAGTCACGATaGTTTTCTCCAGGTAAACAT +
Preference number: 4 (lower is better)
Translates to: NAKSTISIFPMYLLDVKWRGQSR*FSPGKH
Trigger: ATGTTTACCTGGAGAAAAGCATCGTGACTGGCCCCG...CCATTTCACATCTAATAAGTACATGGGAAAGATGCTAATGGTTGACTTTGCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371789.7
ENST00000371791.5
ENST00000429260.7
CDS-3UTR TCA 90 bp AAGTCAACCATTAGCATCTTTCCCATGTACTTATTAGATGTGAAATGGCAGGACTCTCCAGGTAAACATTaGGAGTATTGTTCCGGAACA +
Preference number: 4 (lower is better)
Translates to: KSTISIFPMYLLDVKWQDSPGKH*EYCSGT
Trigger: TGTTCCGGAACAATACTCTCAATGTTTACCTGGAGA...GTCCTGCCATTTCACATCTAATAAGTACATGGGAAAGATGCTAATGGTTGACTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371789.7
ENST00000371791.5
ENST00000429260.7
CDS-3UTR TCA 90 bp GATGTGACAACGTTTTTAATGCAAAGTCAACCATTAGCATCTTTCCCATGTACTTCTCCAGGTAAACATTaGGAGTATTGTTCCGGAACA +
Preference number: 4 (lower is better)
Translates to: DVTTFLMQSQPLASFPCTSPGKH*EYCSGT
Trigger: TGTTCCGGAACAATACTCTCAATGTTTACCTGGAGA...AGTACATGGGAAAGATGCTAATGGTTGACTTTGCATTAAAAACGTTGTCACATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371789.7
ENST00000371791.5
ENST00000429260.7
CDS GCA 90 bp GGCGCCGCGCGTGGGCCGGGTTCCTCTGCGGGTGGGTCCGGAACCTaGCGGGCGACTCCCCAAGGGCCGGGAAGGTCGGGACGGCGAGAG +
Preference number: 5 (lower is better)
Translates to: GAARGPGSSAGGSGT*RATPQGPGRSGRRE
Trigger: CTCTCGCCGTCCCGACCTTCCCGGCCCTTGGGGAGTCGCCCGGCAGGTTCCGGACCCACCCGCAGAGGAACCCGGCCCACGCGCGGCGCC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371789.7
CDS TCA 90 bp GCGGGACTCGGCGGCGTCCTGTTGCCAAGCGACGGCCAGGTCACGTaGCTGGGGAGCGAGCGGAGGGGCCTTAAAGGCGCCGCGCGTGGG +
Preference number: 5 (lower is better)
Translates to: AGLGGVLLPSDGQVT*LGSERRGLKGAARG
Trigger: CCCACGCGCGGCGCCTTTAAGGCCCCTCCGCTCGCTCCCCAGTCACGTGACCTGGCCGTCGCTTGGCAACAGGACGCCGCCGAGTCCCGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371789.7
CDS CCA 90 bp GACTCGGCGGCGTCCTGTTGCCAAGCGACGGCCAGGTCACGTGACTaGGGAGCGAGCGGAGGGGCCTTAAAGGCGCCGCGCGTGGGCCGG +
Preference number: 5 (lower is better)
Translates to: DSAASCCQATARSRD*GASGGALKAPRVGR
Trigger: CCGGCCCACGCGCGGCGCCTTTAAGGCCCCTCCGCTCGCTCCCCAGTCACGTGACCTGGCCGTCGCTTGGCAACAGGACGCCGCCGAGTC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371789.7
CDS CCA 90 bp CCGCGCTCACGCGGTAGTAGTCGCTGGTCCTCTCCGGCGGGGCCGTaGCCTTGGGCGCCACAGGCTCCGCGCACGCTCTGGGGCATTCCT +
Preference number: 5 (lower is better)
Translates to: PRSRGSSRWSSPAGP*PWAPQAPRTLWGIP
Trigger: AGGAATGCCCCAGAGCGTGCGCGGAGCCTGTGGCGCCCAAGGCCACGGCCCCGCCGGAGAGGACCAGCGACTACTACCGCGTGAGCGCGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371789.7
ENST00000371791.5
ENST00000429260.7
CDS CCA 90 bp TCACGCGGTAGTAGTCGCTGGTCCTCTCCGGCGGGGCCGTGGCCTTaGGCGCCACAGGCTCCGCGCACGCTCTGGGGCATTCCTCAGCCA +
Preference number: 5 (lower is better)
Translates to: SRGSSRWSSPAGPWP*APQAPRTLWGIPQP
Trigger: TGGCTGAGGAATGCCCCAGAGCGTGCGCGGAGCCTGTGGCGCCCAAGGCCACGGCCCCGCCGGAGAGGACCAGCGACTACTACCGCGTGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371789.7
ENST00000371791.5
ENST00000429260.7
CDS GCA 90 bp CAGCCATTGTGCCTGGAGGAGAAGCGGGACTCGGCGGCGTCCTGTTaGCAAGCGACGGCCAGGTCACGTGACTGGGGAGCGAGCGGAGGG +
Preference number: 5 (lower is better)
Translates to: QPLCLEEKRDSAASC*QATARSRDWGASGG
Trigger: CCCTCCGCTCGCTCCCCAGTCACGTGACCTGGCCGTCGCTTGGCAACAGGACGCCGCCGAGTCCCGCTTCTCCTCCAGGCACAATGGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371789.7
CDS CCA 90 bp GCCCGGGCTGGTGATGTGGCCTCGAAGGCAGCCTCTGGGAGTACCTaGCTGATGACCGTTCTGAATGGCCCGGCCTCCCCGGCCCCCTCT +
Preference number: 5 (lower is better)
Translates to: ARAGDVASKAASGST*LMTVLNGPASPAPS
Trigger: AGAGGGGGCCGGGGAGGCCGGGCCATTCAGAACGGTCATCAGCCAGGTACTCCCAGAGGCTGCCTTCGAGGCCACATCACCAGCCCGGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371786.3
CDS CCA 90 bp CACAGGCTCCGCGCACGCTCTGGGGCATTCCTCAGCCATTGTGCCTaGAGGAGAAGCGGGACTCGGCGGCGTCCTGTTGCCAAGCGACGG +
Preference number: 5 (lower is better)
Translates to: HRLRARSGAFLSHCA*RRSGTRRRPVAKRR
Trigger: CCGTCGCTTGGCAACAGGACGCCGCCGAGTCCCGCTTCTCCTCCAGGCACAATGGCTGAGGAATGCCCCAGAGCGTGCGCGGAGCCTGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371789.7
ENST00000371791.5
CDS TCA 90 bp AGACAGCCTTCTGGGTCCTGTAGCCCCGGAACCACCCCGGGTTGTTaGACCTGCCCGGCAGGTCCGCGCTCACGCGGTAGTAGTCGCTGG +
Preference number: 5 (lower is better)
Translates to: RQPSGSCSPGTTPGC*TCPAGPRSRGSSRW
Trigger: CCAGCGACTACTACCGCGTGAGCGCGGACCTGCCGGGCAGGTTCAACAACCCGGGGTGGTTCCGGGGCTACAGGACCCAGAAGGCTGTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371789.7
ENST00000371791.5
ENST00000429260.7
CDS GCA 90 bp CTGAATGGCCCGGCCTCCCCGGCCCCCTCTGCTTGCCACTGTCCCTaGTCTTCCAAGGCAGGCCAAAGCCCTAAAGAGCAGGCAGCCAGC +
Preference number: 5 (lower is better)
Translates to: LNGPASPAPSACHCP*SSKAGQSPKEQAAS
Trigger: GCTGGCTGCCTGCTCTTTAGGGCTTTGGCCTGCCTTGGAAGAGCAGGGACAGTGGCAAGCAGAGGGGGCCGGGGAGGCCGGGCCATTCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371786.3
CDS GCA 90 bp CAGCCATTGTGCCTGGAGGAGAAGCGGGACTCGGCGGCGTCCTGTTaGCAAGCGACGGCCAGGTCACGTGACCAGGAGCAAGGTCGGGAT +
Preference number: 5 (lower is better)
Translates to: QPLCLEEKRDSAASC*QATARSRDQEQGRD
Trigger: ATCCCGACCTTGCTCCTGGTCACGTGACCTGGCCGTCGCTTGGCAACAGGACGCCGCCGAGTCCCGCTTCTCCTCCAGGCACAATGGCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371791.5
CDS-3UTR CAA 90 bp CCTGGGGTCAGAGGACTCCTAGAGGGAGTTTCCAGCCCCTCAATCGCAGATGGACTCGGCGGCGTCCTGTaGCCAAGCGACGGCCAGGTC +
Preference number: 5 (lower is better)
Translates to: PGVRGLLEGVSSPSIADGLGGVL*PSDGQV
Trigger: GACCTGGCCGTCGCTTGGCAACAGGACGCCGCCGAG...TCCATCTGCGATTGAGGGGCTGGAAACTCCCTCTAGGAGTCCTCTGACCCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371789.7
ENST00000371791.5
CDS-3UTR CAA 90 bp CCAGGAGGCCCTGGGGTCAGAGGACTCCTAGAGGGAGTTTCCAGCCCCTCAATCAACCACCCCGGGTTGTaGAACCTGCCCGGCAGGTCC +
Preference number: 5 (lower is better)
Translates to: PGGPGVRGLLEGVSSPSINHPGL*NLPGRS
Trigger: GGACCTGCCGGGCAGGTTCAACAACCCGGGGTGGTT...GATTGAGGGGCTGGAAACTCCCTCTAGGAGTCCTCTGACCCCAGGGCCTCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371789.7
ENST00000371791.5
CDS-3UTR CAA 90 bp GGAAGGCAGCGCAGTCTGTGCCGTCACAATCGGGCGACTGTGGGTGATGAGGGAAACCACCCCGGGTTGTaGAACCTGCCCGGCAGGTCC +
Preference number: 5 (lower is better)
Translates to: GRQRSLCRHNRATVGDEGNHPGL*NLPGRS
Trigger: GGACCTGCCGGGCAGGTTCAACAACCCGGGGTGGTT...TCCCTCATCACCCACAGTCGCCCGATTGTGACGGCACAGACTGCGCTGCCTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371789.7
ENST00000371791.5
ENST00000429260.7
CDS CCA 90 bp GCATCTCGTGCACGGTGGGGGCTCTGCTCCCGTAAGCCTGGTTACTaGTCCTGTACACGGAGACAGCCTTCTGGGTCCTGTAGCCCCGGA +
Preference number: 5 (lower is better)
Translates to: ASRARWGLCSRKPGY*SCTRRQPSGSCSPG
Trigger: TCCGGGGCTACAGGACCCAGAAGGCTGTCTCCGTGTACAGGACCAGTAACCAGGCTTACGGGAGCAGAGCCCCCACCGTGCACGAGATGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371789.7
ENST00000371791.5
ENST00000429260.7
CDS-3UTR CAA 90 bp CCTGGGGTCAGAGGACTCCTAGAGGGAGTTTCCAGCCCCTCAATCGCAGATGGACGGAACCACCCCGGGTaGTTGAACCTGCCCGGCAGG +
Preference number: 5 (lower is better)
Translates to: PGVRGLLEGVSSPSIADGRNHPG*LNLPGR
Trigger: CCTGCCGGGCAGGTTCAACAACCCGGGGTGGTTCCG...TCCATCTGCGATTGAGGGGCTGGAAACTCCCTCTAGGAGTCCTCTGACCCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371789.7
ENST00000371791.5
CDS TCA 90 bp TCCAAGGCAGGCCAAAGCCCTAAAGAGCAGGCAGCCAGCAAGTGCTaGTCCCCAGCCCTGGCAGGGCCTCGGCACATGCTGCAATTTCTG +
Preference number: 5 (lower is better)
Translates to: SKAGQSPKEQAASKC*SPALAGPRHMLQFL
Trigger: CAGAAATTGCAGCATGTGCCGAGGCCCTGCCAGGGCTGGGGATCAGCACTTGCTGGCTGCCTGCTCTTTAGGGCTTTGGCCTGCCTTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371786.3
CDS GCA 90 bp TTCCGGAACATTCCACCCGAGGCATCTCGTGCACGGTGGGGGCTCTaGTCCCGTAAGCCTGGTTACTGGTCCTGTACACGGAGACAGCCT +
Preference number: 5 (lower is better)
Translates to: FRNIPPEASRARWGL*SRKPGYWSCTRRQP
Trigger: AGGCTGTCTCCGTGTACAGGACCAGTAACCAGGCTTACGGGAGCAGAGCCCCCACCGTGCACGAGATGCCTCGGGTGGAATGTTCCGGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371789.7
ENST00000371791.5
ENST00000419770.1
CDS-3UTR CAA 90 bp GTTGTAACTGGGGTGGAAGTTGAGCCGGTCACAGGAGGTGATGCAGTTATCGGGCGGAACCACCCCGGGTaGTTGAACCTGCCCGGCAGG +
Preference number: 5 (lower is better)
Translates to: VVTGVEVEPVTGGDAVIGRNHPG*LNLPGR
Trigger: CCTGCCGGGCAGGTTCAACAACCCGGGGTGGTTCCG...CCCGATAACTGCATCACCTCCTGTGACCGGCTCAACTTCCACCCCAGTTACAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371789.7
ENST00000371791.5
CDS TCA 90 bp TCCCCTGGAAATGCCCCCATGGAAAGAGCAATATGCCCGGGCTGGTaGTGTGGCCTCGAAGGCAGCCTCTGGGAGTACCTGGCTGATGAC +
Preference number: 5 (lower is better)
Translates to: SPGNAPMERAICPGW*CGLEGSLWEYLADD
Trigger: GTCATCAGCCAGGTACTCCCAGAGGCTGCCTTCGAGGCCACATCACCAGCCCGGGCATATTGCTCTTTCCATGGGGGCATTTCCAGGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371786.3
CDS TCA 90 bp AGGAGCAAGGTCGGGATCAGAACCTGGCTCCAGCCCTCTGTTTCCTaGAAAGGTCCCTGTGCTTCCAGGTCTTTCCTGGGGCTGCTGGGC +
Preference number: 5 (lower is better)
Translates to: RSKVGIRTWLQPSVS*KGPCASRSFLGLLG
Trigger: GCCCAGCAGCCCCAGGAAAGACCTGGAAGCACAGGGACCTTTTCAGGAAACAGAGGGCTGGAGCCAGGTTCTGATCCCGACCTTGCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371791.5
CDS CCA 90 bp GCATCTCGTGCACGGTGGGGGCTCTGCTCCCGTAAGCCTGGTTACTaGTCCTGTACACGGAGACAGCCTTCTGGGTCCCGACACAAATCA +
Preference number: 5 (lower is better)
Translates to: ASRARWGLCSRKPGY*SCTRRQPSGSRHKS
Trigger: TGATTTGTGTCGGGACCCAGAAGGCTGTCTCCGTGTACAGGACCAGTAACCAGGCTTACGGGAGCAGAGCCCCCACCGTGCACGAGATGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000419770.1
CDS-3UTR CAA 90 bp GATGTGAAATGGCAGGACTTCACGGCCCCGTTTGCATATTTTCCTACTCCGCAGCTCGGCGGCGTCCTGTaGCCAAGCGACGGCCAGGTC +
Preference number: 5 (lower is better)
Translates to: DVKWQDFTAPFAYFPTPQLGGVL*PSDGQV
Trigger: GACCTGGCCGTCGCTTGGCAACAGGACGCCGCCGAG...CTGCGGAGTAGGAAAATATGCAAACGGGGCCGTGAAGTCCTGCCATTTCACATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371789.7
ENST00000371791.5
CDS-3UTR CAA 90 bp CCTGTTGATGTTGTAACTGGGGTGGAAGTTGAGCCGGTCACAGGAGGTGATGCAAACCACCCCGGGTTGTaGAACCTGCCCGGCAGGTCC +
Preference number: 5 (lower is better)
Translates to: PVDVVTGVEVEPVTGGDANHPGL*NLPGRS
Trigger: GGACCTGCCGGGCAGGTTCAACAACCCGGGGTGGTT...TGCATCACCTCCTGTGACCGGCTCAACTTCCACCCCAGTTACAACATCAACAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371789.7
ENST00000371791.5
CDS-3UTR CAA 90 bp GGAAGGCAGCGCAGTCTGTGCCGTCACAATCGGGCGACTGTGGGTGATGAGGGAACTTCACGGCCCCGTTaGCATATTTTCCTACTCCGC +
Preference number: 5 (lower is better)
Translates to: GRQRSLCRHNRATVGDEGTSRPR*HIFLLR
Trigger: GCGGAGTAGGAAAATATGCAAACGGGGCCGTGAAGT...TCCCTCATCACCCACAGTCGCCCGATTGTGACGGCACAGACTGCGCTGCCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371789.7
ENST00000371791.5
ENST00000429260.7
CDS GCA 90 bp CACAAGCCACAGCCTTGTATTTGGTTGACGGCACTCCCCTGGAAATaGCCCCATGGAAAGAGCAATATGCCCGGGCTGGTGATGTGGCCT +
Preference number: 5 (lower is better)
Translates to: HKPQPCIWLTALPWK*PHGKSNMPGLVMWP
Trigger: AGGCCACATCACCAGCCCGGGCATATTGCTCTTTCCATGGGGGCATTTCCAGGGGAGTGCCGTCAACCAAATACAAGGCTGTGGCTTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371786.3
CDS CCA 90 bp ACAGCCTTGTATTTGGTTGACGGCACTCCCCTGGAAATGCCCCCATaGAAAGAGCAATATGCCCGGGCTGGTGATGTGGCCTCGAAGGCA +
Preference number: 5 (lower is better)
Translates to: TALYLVDGTPLEMPP*KEQYARAGDVASKA
Trigger: TGCCTTCGAGGCCACATCACCAGCCCGGGCATATTGCTCTTTCCATGGGGGCATTTCCAGGGGAGTGCCGTCAACCAAATACAAGGCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371786.3
CDS-3UTR CAA 90 bp TCCCATGTACTTATTAGATGTGAAATGGCAGGACTTCACGGCCCCGTTTGCATACGGAACCACCCCGGGTaGTTGAACCTGCCCGGCAGG +
Preference number: 5 (lower is better)
Translates to: SHVLIRCEMAGLHGPVCIRNHPG*LNLPGR
Trigger: CCTGCCGGGCAGGTTCAACAACCCGGGGTGGTTCCG...TATGCAAACGGGGCCGTGAAGTCCTGCCATTTCACATCTAATAAGTACATGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371789.7
ENST00000371791.5
ENST00000429260.7
CDS CCA 90 bp ATTCTGCACAAGCCACAGCCTTGTATTTGGTTGACGGCACTCCCCTaGAAATGCCCCCATGGAAAGAGCAATATGCCCGGGCTGGTGATG +
Preference number: 5 (lower is better)
Translates to: ILHKPQPCIWLTALP*KCPHGKSNMPGLVM
Trigger: CATCACCAGCCCGGGCATATTGCTCTTTCCATGGGGGCATTTCCAGGGGAGTGCCGTCAACCAAATACAAGGCTGTGGCTTGTGCAGAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371786.3
CDS-3UTR CAA 90 bp TTCAGGGAAGGCAGCGCAGTCTGTGCCGTCACAATCGGGCGACTGTGGGTGATGATATTACAAACAGTTTaGGAGAGCGAGAGGTTGCGC +
Preference number: 5 (lower is better)
Translates to: FREGSAVCAVTIGRLWVMILQTV*ESERLR
Trigger: GCGCAACCTCTCGCTCTCCAAAACTGTTTGTAATAT...CATCACCCACAGTCGCCCGATTGTGACGGCACAGACTGCGCTGCCTTCCCTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371789.7
CDS-3UTR CAA 90 bp GTGAAATGGCAGGACTTCACGGCCCCGTTTGCATATTTTCCTACTCCGCAGACGCTCGGCAGGCAACGATaGGACTTTTGCTGTCCAATG +
Preference number: 5 (lower is better)
Translates to: VKWQDFTAPFAYFPTPQTLGRQR*DFCCPM
Trigger: CATTGGACAGCAAAAGTCCAATCGTTGCCTGCCGAG...CGTCTGCGGAGTAGGAAAATATGCAAACGGGGCCGTGAAGTCCTGCCATTTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371789.7
CDS-3UTR CAA 90 bp GCAGTCTGTGCCGTCACAATCGGGCGACTGTGGGTGATGAGGGATGATGATTTTACTTCACGGCCCCGTTaGCATATTTTCCTACTCCGC +
Preference number: 5 (lower is better)
Translates to: AVCAVTIGRLWVMRDDDFTSRPR*HIFLLR
Trigger: GCGGAGTAGGAAAATATGCAAACGGGGCCGTGAAGT...AAAATCATCATCCCTCATCACCCACAGTCGCCCGATTGTGACGGCACAGACTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371789.7
ENST00000371791.5
ENST00000429260.7
CDS-3UTR CAA 90 bp GATGTTGTAACTGGGGTGGAAGTTGAGCCGGTCACAGGAGGTGATGCAGTTATCCACCCCGAGTCTAAATaGAGACCCGAGATCTGGCTA +
Preference number: 5 (lower is better)
Translates to: DVVTGVEVEPVTGGDAVIHPESK*RPEIWL
Trigger: TAGCCAGATCTCGGGTCTCAATTTAGACTCGGGGTG...GATAACTGCATCACCTCCTGTGACCGGCTCAACTTCCACCCCAGTTACAACATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371789.7
CDS TCA 90 bp TGCAGTTATCGGGGCCAGTCACGATGCTTTTCTCCAGGTAAACATTaGGAGTATTGTTCCGGAACATTCCACCCGAGGCATCTCGTGCAC +
Preference number: 5 (lower is better)
Translates to: CSYRGQSRCFSPGKH*EYCSGTFHPRHLVH
Trigger: GTGCACGAGATGCCTCGGGTGGAATGTTCCGGAACAATACTCTCAATGTTTACCTGGAGAAAAGCATCGTGACTGGCCCCGATAACTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371789.7
ENST00000371791.5
ENST00000419770.1
CDS TCA 90 bp TGCAGTTATCGGGGCCAGTCACGATGCTTTTCTCCAGGTAAACATTaGGAGTATTGTTCCGGAACATTCCACCCGCTGCAAGTTGTTGGG +
Preference number: 5 (lower is better)
Translates to: CSYRGQSRCFSPGKH*EYCSGTFHPLQVVG
Trigger: CCCAACAACTTGCAGCGGGTGGAATGTTCCGGAACAATACTCTCAATGTTTACCTGGAGAAAAGCATCGTGACTGGCCCCGATAACTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371786.3
ENST00000429260.7
CDS GCA 90 bp CAAATATCGTTTAAATATTACAAACAGTTTTGGAGAGCGAGAGGTTaGGCAGGACGTGGTTCACAGCTCACTTGGCGGGAGGCGAGGGTC +
Preference number: 5 (lower is better)
Translates to: QISFKYYKQFWRARG*AGRGSQLTWREARV
Trigger: GACCCTCGCCTCCCGCCAAGTGAGCTGTGAACCACGTCCTGCGCAACCTCTCGCTCTCCAAAACTGTTTGTAATATTTAAACGATATTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371789.7
CDS-3UTR CAA 90 bp ATCTTTCCCATGTACTTATTAGATGTGAAATGGCAGGACTTCACGGCCCCGTTTTTGGAGAGCGAGAGGTaGCGCAGGACGTGGTTCACA +
Preference number: 5 (lower is better)
Translates to: IFPMYLLDVKWQDFTAPFLESER*RRTWFT
Trigger: TGTGAACCACGTCCTGCGCAACCTCTCGCTCTCCAA...AAACGGGGCCGTGAAGTCCTGCCATTTCACATCTAATAAGTACATGGGAAAGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371789.7
CDS-3UTR CAA 90 bp GATGTGAAATGGCAGGACTTCACGGCCCCGTTTGCATATTTTCCTACTCCGCAGGCAACGATTGGACTTTaGCTGTCCAATGTACTCCAG +
Preference number: 5 (lower is better)
Translates to: DVKWQDFTAPFAYFPTPQATIGL*LSNVLQ
Trigger: CTGGAGTACATTGGACAGCAAAAGTCCAATCGTTGC...CTGCGGAGTAGGAAAATATGCAAACGGGGCCGTGAAGTCCTGCCATTTCACATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371789.7
CDS-3UTR CAA 90 bp TGTGCCGTCACAATCGGGCGACTGTGGGTGATGAGGGATGATGATTTTCCAGGATCCACCCGCTGCAAGTaGTTGGGAAAATTTATTCGA +
Preference number: 5 (lower is better)
Translates to: CAVTIGRLWVMRDDDFPGSTRCK*LGKFIR
Trigger: TCGAATAAATTTTCCCAACAACTTGCAGCGGGTGGA...TCCTGGAAAATCATCATCCCTCATCACCCACAGTCGCCCGATTGTGACGGCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429260.7
CDS-3UTR CAA 90 bp ATTTTCCTACTCCGCAGACGAATAATATTTTCAGGGAAGGCAGCGCAGTCTGTGACTTCACGGCCCCGTTaGCATATTTTCCTACTCCGC +
Preference number: 5 (lower is better)
Translates to: IFLLRRRIIFSGKAAQSVTSRPR*HIFLLR
Trigger: GCGGAGTAGGAAAATATGCAAACGGGGCCGTGAAGT...CACAGACTGCGCTGCCTTCCCTGAAAATATTATTCGTCTGCGGAGTAGGAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000371789.7
ENST00000371791.5
ENST00000429260.7
CDS-3UTR CAA 90 bp GCAGTCTGTGCCGTCACAATCGGGCGACTGTGGGTGATGAGGGATGATGATTTTACCCGCTGCAAGTTGTaGGGAAAATTTATTCGAATT +
Preference number: 5 (lower is better)
Translates to: AVCAVTIGRLWVMRDDDFTRCKL*GKFIRI
Trigger: AATTCGAATAAATTTTCCCAACAACTTGCAGCGGGT...AAAATCATCATCCCTCATCACCCACAGTCGCCCGATTGTGACGGCACAGACTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429260.7
CDS CCA 90 bp GAAATTCTCCTAAGCCAAATATCGTTTAAATATTACAAACAGTTTTaGAGAGCGAGAGGTTGCGCAGGACGTGGTTCACAGCTCACTTGG +
Preference number: 5 (lower is better)
Translates to: EILLSQISFKYYKQF*RARGCAGRGSQLTW
Trigger: CCAAGTGAGCTGTGAACCACGTCCTGCGCAACCTCTCGCTCTCCAAAACTGTTTGTAATATTTAAACGATATTTGGCTTAGGAGAATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371789.7
CDS GCA 72 bp CGTGGGCCGGGTTCCTCTGCGGGTGGGTCCGGAACCTaGCGGGCGACTCCCCAAGGGCCGGGAAGGTCGGGA +
Preference number: 6 (lower is better)
Translates to: RGPGSSAGGSGT*RATPQGPGRSG
Trigger: TCCCGACCTTCCCGGCCCTTGGGGAGTCGCCCGGCAGGTTCCGGACCCACCCGCAGAGGAACCCGGCCCACG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371789.7
CDS CCA 72 bp CGCGGTAGTAGTCGCTGGTCCTCTCCGGCGGGGCCGTaGCCTTGGGCGCCACAGGCTCCGCGCACGCTCTGG +
Preference number: 6 (lower is better)
Translates to: RGSSRWSSPAGP*PWAPQAPRTLW
Trigger: CCAGAGCGTGCGCGGAGCCTGTGGCGCCCAAGGCCACGGCCCCGCCGGAGAGGACCAGCGACTACTACCGCG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371789.7
ENST00000371791.5
ENST00000429260.7
CDS CCA 72 bp GGGCCGGGAAGGTCGGGACGGCGAGAGATTCCCTGCTaGGACCGTCGTGTGAGGCAGCCCCAGGCCCCCAGC +
Preference number: 6 (lower is better)
Translates to: GPGRSGRREIPC*DRRVRQPQAPS
Trigger: GCTGGGGGCCTGGGGCTGCCTCACACGACGGTCCCAGCAGGGAATCTCTCGCCGTCCCGACCTTCCCGGCCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371789.7
CDS GCA 72 bp CAAGGGCCGGGAAGGTCGGGACGGCGAGAGATTCCCTaGTGGGACCGTCGTGTGAGGCAGCCCCAGGCCCCC +
Preference number: 6 (lower is better)
Translates to: QGPGRSGRREIP*WDRRVRQPQAP
Trigger: GGGGGCCTGGGGCTGCCTCACACGACGGTCCCAGCAGGGAATCTCTCGCCGTCCCGACCTTCCCGGCCCTTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371789.7
CDS CCA 72 bp AGTAGTCGCTGGTCCTCTCCGGCGGGGCCGTGGCCTTaGGCGCCACAGGCTCCGCGCACGCTCTGGGGCATT +
Preference number: 6 (lower is better)
Translates to: SSRWSSPAGPWP*APQAPRTLWGI
Trigger: AATGCCCCAGAGCGTGCGCGGAGCCTGTGGCGCCCAAGGCCACGGCCCCGCCGGAGAGGACCAGCGACTACT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371789.7
ENST00000371791.5
ENST00000429260.7
CDS TCA 72 bp GGCGGCGTCCTGTTGCCAAGCGACGGCCAGGTCACGTaGCTGGGGAGCGAGCGGAGGGGCCTTAAAGGCGCC +
Preference number: 6 (lower is better)
Translates to: GGVLLPSDGQVT*LGSERRGLKGA
Trigger: GGCGCCTTTAAGGCCCCTCCGCTCGCTCCCCAGTCACGTGACCTGGCCGTCGCTTGGCAACAGGACGCCGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371789.7
CDS CCA 72 bp GCGTCCTGTTGCCAAGCGACGGCCAGGTCACGTGACTaGGGAGCGAGCGGAGGGGCCTTAAAGGCGCCGCGC +
Preference number: 6 (lower is better)
Translates to: ASCCQATARSRD*GASGGALKAPR
Trigger: GCGCGGCGCCTTTAAGGCCCCTCCGCTCGCTCCCCAGTCACGTGACCTGGCCGTCGCTTGGCAACAGGACGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371789.7
CDS GCA 72 bp TGCCTGGAGGAGAAGCGGGACTCGGCGGCGTCCTGTTaGCAAGCGACGGCCAGGTCACGTGACTGGGGAGCG +
Preference number: 6 (lower is better)
Translates to: CLEEKRDSAASC*QATARSRDWGA
Trigger: CGCTCCCCAGTCACGTGACCTGGCCGTCGCTTGGCAACAGGACGCCGCCGAGTCCCGCTTCTCCTCCAGGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371789.7
CDS CCA 72 bp GCGAGAGGTTGCGCAGGACGTGGTTCACAGCTCACTTaGCGGGAGGCGAGGGTCCCCATCGCCCAGCGGGCT +
Preference number: 6 (lower is better)
Translates to: ARGCAGRGSQLT*REARVPIAQRA
Trigger: AGCCCGCTGGGCGATGGGGACCCTCGCCTCCCGCCAAGTGAGCTGTGAACCACGTCCTGCGCAACCTCTCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371789.7
CDS CAA 72 bp AGCGAGAGGTTGCGCAGGACGTGGTTCACAGCTCACTaGGCGGGAGGCGAGGGTCCCCATCGCCCAGCGGGC +
Preference number: 6 (lower is better)
Translates to: SERLRRTWFTAH*AGGEGPHRPAG
Trigger: GCCCGCTGGGCGATGGGGACCCTCGCCTCCCGCCAAGTGAGCTGTGAACCACGTCCTGCGCAACCTCTCGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371789.7
CDS TCA 72 bp TCTGGGTCCTGTAGCCCCGGAACCACCCCGGGTTGTTaGACCTGCCCGGCAGGTCCGCGCTCACGCGGTAGT +
Preference number: 6 (lower is better)
Translates to: SGSCSPGTTPGC*TCPAGPRSRGS
Trigger: ACTACCGCGTGAGCGCGGACCTGCCGGGCAGGTTCAACAACCCGGGGTGGTTCCGGGGCTACAGGACCCAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371789.7
ENST00000371791.5
ENST00000429260.7
CDS CCA 72 bp CGCGCACGCTCTGGGGCATTCCTCAGCCATTGTGCCTaGAGGAGAAGCGGGACTCGGCGGCGTCCTGTTGCC +
Preference number: 6 (lower is better)
Translates to: RARSGAFLSHCA*RRSGTRRRPVA
Trigger: GGCAACAGGACGCCGCCGAGTCCCGCTTCTCCTCCAGGCACAATGGCTGAGGAATGCCCCAGAGCGTGCGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371789.7
ENST00000371791.5
CDS GCA 72 bp TGCCTGGAGGAGAAGCGGGACTCGGCGGCGTCCTGTTaGCAAGCGACGGCCAGGTCACGTGACCAGGAGCAA +
Preference number: 6 (lower is better)
Translates to: CLEEKRDSAASC*QATARSRDQEQ
Trigger: TTGCTCCTGGTCACGTGACCTGGCCGTCGCTTGGCAACAGGACGCCGCCGAGTCCCGCTTCTCCTCCAGGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371791.5
CDS CCA 72 bp AGCCTCTGGGAGTACCTGGCTGATGACCGTTCTGAATaGCCCGGCCTCCCCGGCCCCCTCTGCTTGCCACTG +
Preference number: 6 (lower is better)
Translates to: SLWEYLADDRSE*PGLPGPLCLPL
Trigger: CAGTGGCAAGCAGAGGGGGCCGGGGAGGCCGGGCCATTCAGAACGGTCATCAGCCAGGTACTCCCAGAGGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371786.3
CDS CCA 72 bp GGTGATGTGGCCTCGAAGGCAGCCTCTGGGAGTACCTaGCTGATGACCGTTCTGAATGGCCCGGCCTCCCCG +
Preference number: 6 (lower is better)
Translates to: GDVASKAASGST*LMTVLNGPASP
Trigger: CGGGGAGGCCGGGCCATTCAGAACGGTCATCAGCCAGGTACTCCCAGAGGCTGCCTTCGAGGCCACATCACC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371786.3
CDS CCA 72 bp GCACGGTGGGGGCTCTGCTCCCGTAAGCCTGGTTACTaGTCCTGTACACGGAGACAGCCTTCTGGGTCCTGG +
Preference number: 6 (lower is better)
Translates to: ARWGLCSRKPGY*SCTRRQPSGSW
Trigger: CCAGGACCCAGAAGGCTGTCTCCGTGTACAGGACCAGTAACCAGGCTTACGGGAGCAGAGCCCCCACCGTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371786.3
CDS CCA 72 bp GCACGGTGGGGGCTCTGCTCCCGTAAGCCTGGTTACTaGTCCTGTACACGGAGACAGCCTTCTGGGTCCCGA +
Preference number: 6 (lower is better)
Translates to: ARWGLCSRKPGY*SCTRRQPSGSR
Trigger: TCGGGACCCAGAAGGCTGTCTCCGTGTACAGGACCAGTAACCAGGCTTACGGGAGCAGAGCCCCCACCGTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000419770.1
CDS GCA 72 bp ATTCCACCCGAGGCATCTCGTGCACGGTGGGGGCTCTaGTCCCGTAAGCCTGGTTACTGGTCCTGTACACGG +
Preference number: 6 (lower is better)
Translates to: IPPEASRARWGL*SRKPGYWSCTR
Trigger: CCGTGTACAGGACCAGTAACCAGGCTTACGGGAGCAGAGCCCCCACCGTGCACGAGATGCCTCGGGTGGAAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371789.7
ENST00000371791.5
ENST00000419770.1
CDS CCA 72 bp GCACGGTGGGGGCTCTGCTCCCGTAAGCCTGGTTACTaGTCCTGTACACGGAGACAGCCTTCTGGGTCCTGT +
Preference number: 6 (lower is better)
Translates to: ARWGLCSRKPGY*SCTRRQPSGSC
Trigger: ACAGGACCCAGAAGGCTGTCTCCGTGTACAGGACCAGTAACCAGGCTTACGGGAGCAGAGCCCCCACCGTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371789.7
ENST00000371791.5
ENST00000429260.7
CDS CCA 72 bp CAAACAGTTTTGGAGAGCGAGAGGTTGCGCAGGACGTaGTTCACAGCTCACTTGGCGGGAGGCGAGGGTCCC +
Preference number: 6 (lower is better)
Translates to: QTVLESERLRRT*FTAHLAGGEGP
Trigger: GGGACCCTCGCCTCCCGCCAAGTGAGCTGTGAACCACGTCCTGCGCAACCTCTCGCTCTCCAAAACTGTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371789.7
CDS TCA 72 bp AATGCCCCCATGGAAAGAGCAATATGCCCGGGCTGGTaGTGTGGCCTCGAAGGCAGCCTCTGGGAGTACCTG +
Preference number: 6 (lower is better)
Translates to: NAPMERAICPGW*CGLEGSLWEYL
Trigger: CAGGTACTCCCAGAGGCTGCCTTCGAGGCCACATCACCAGCCCGGGCATATTGCTCTTTCCATGGGGGCATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371786.3
CDS TCA 72 bp GTCGGGATCAGAACCTGGCTCCAGCCCTCTGTTTCCTaGAAAGGTCCCTGTGCTTCCAGGTCTTTCCTGGGG +
Preference number: 6 (lower is better)
Translates to: VGIRTWLQPSVS*KGPCASRSFLG
Trigger: CCCCAGGAAAGACCTGGAAGCACAGGGACCTTTTCAGGAAACAGAGGGCTGGAGCCAGGTTCTGATCCCGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371791.5
CDS GCA 72 bp CAGCCTTGTATTTGGTTGACGGCACTCCCCTGGAAATaGCCCCATGGAAAGAGCAATATGCCCGGGCTGGTG +
Preference number: 6 (lower is better)
Translates to: QPCIWLTALPWK*PHGKSNMPGLV
Trigger: CACCAGCCCGGGCATATTGCTCTTTCCATGGGGGCATTTCCAGGGGAGTGCCGTCAACCAAATACAAGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371786.3
CDS CCA 72 bp TATTTGGTTGACGGCACTCCCCTGGAAATGCCCCCATaGAAAGAGCAATATGCCCGGGCTGGTGATGTGGCC +
Preference number: 6 (lower is better)
Translates to: YLVDGTPLEMPP*KEQYARAGDVA
Trigger: GGCCACATCACCAGCCCGGGCATATTGCTCTTTCCATGGGGGCATTTCCAGGGGAGTGCCGTCAACCAAATA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371786.3
CDS CAA 72 bp CACTGCAGGTCCACTCGGCAGGCAACGATTGGACTTTaGCTGTCCAATGTACTCCAGGGATGCTATGCCCCC +
Preference number: 6 (lower is better)
Translates to: HCRSTRQATIGL*LSNVLQGCYAP
Trigger: GGGGGCATAGCATCCCTGGAGTACATTGGACAGCAAAAGTCCAATCGTTGCCTGCCGAGTGGACCTGCAGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371789.7
CDS CCA 72 bp AAGCCACAGCCTTGTATTTGGTTGACGGCACTCCCCTaGAAATGCCCCCATGGAAAGAGCAATATGCCCGGG +
Preference number: 6 (lower is better)
Translates to: KPQPCIWLTALP*KCPHGKSNMPG
Trigger: CCCGGGCATATTGCTCTTTCCATGGGGGCATTTCCAGGGGAGTGCCGTCAACCAAATACAAGGCTGTGGCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371786.3
CDS TCA 72 bp CGGGGCCAGTCACGATGCTTTTCTCCAGGTAAACATTaGGAGTATTGTTCCGGAACATTCCACCCGAGGCAT +
Preference number: 6 (lower is better)
Translates to: RGQSRCFSPGKH*EYCSGTFHPRH
Trigger: ATGCCTCGGGTGGAATGTTCCGGAACAATACTCTCAATGTTTACCTGGAGAAAAGCATCGTGACTGGCCCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371789.7
ENST00000371791.5
ENST00000419770.1
CDS TCA 72 bp CGGGGCCAGTCACGATGCTTTTCTCCAGGTAAACATTaGGAGTATTGTTCCGGAACATTCCACCCGCTGCAA +
Preference number: 6 (lower is better)
Translates to: RGQSRCFSPGKH*EYCSGTFHPLQ
Trigger: TTGCAGCGGGTGGAATGTTCCGGAACAATACTCTCAATGTTTACCTGGAGAAAAGCATCGTGACTGGCCCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371786.3
ENST00000429260.7
CDS CAA 72 bp ACTCTAATTCTGCACAAGCCACAGCCTTGTATTTGGTaGACGGCACTCCCCTGGAAATGCCCCCATGGAAAG +
Preference number: 6 (lower is better)
Translates to: TLILHKPQPCIW*TALPWKCPHGK
Trigger: CTTTCCATGGGGGCATTTCCAGGGGAGTGCCGTCAACCAAATACAAGGCTGTGGCTTGTGCAGAATTAGAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371786.3
CDS CAA 72 bp ATTTACTCTAATTCTGCACAAGCCACAGCCTTGTATTaGGTTGACGGCACTCCCCTGGAAATGCCCCCATGG +
Preference number: 6 (lower is better)
Translates to: IYSNSAQATALY*VDGTPLEMPPW
Trigger: CCATGGGGGCATTTCCAGGGGAGTGCCGTCAACCAAATACAAGGCTGTGGCTTGTGCAGAATTAGAGTAAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371786.3
CDS GCA 72 bp TTTAAATATTACAAACAGTTTTGGAGAGCGAGAGGTTaGGCAGGACGTGGTTCACAGCTCACTTGGCGGGAG +
Preference number: 6 (lower is better)
Translates to: FKYYKQFWRARG*AGRGSQLTWRE
Trigger: CTCCCGCCAAGTGAGCTGTGAACCACGTCCTGCGCAACCTCTCGCTCTCCAAAACTGTTTGTAATATTTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371789.7
CDS CCA 72 bp GCCTGGTTACTGGTCCTGTACACGGAGACAGCCTTCTaGGTCCTGGTAGATGAGAAACACTCTATTTTCATT +
Preference number: 6 (lower is better)
Translates to: AWLLVLYTETAF*VLVDEKHSIFI
Trigger: AATGAAAATAGAGTGTTTCTCATCTACCAGGACCCAGAAGGCTGTCTCCGTGTACAGGACCAGTAACCAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371786.3
CDS CCA 72 bp CTAAGCCAAATATCGTTTAAATATTACAAACAGTTTTaGAGAGCGAGAGGTTGCGCAGGACGTGGTTCACAG +
Preference number: 6 (lower is better)
Translates to: LSQISFKYYKQF*RARGCAGRGSQ
Trigger: CTGTGAACCACGTCCTGCGCAACCTCTCGCTCTCCAAAACTGTTTGTAATATTTAAACGATATTTGGCTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371789.7
CDS GCA 72 bp AACATTGAGAGTATTGTTCCGGAACATTCCACCCGCTaGAAGTTGTTGGGAAAATTTATTCGAATTTGGATA +
Preference number: 6 (lower is better)
Translates to: NIESIVPEHSTR*KLLGKFIRIWI
Trigger: TATCCAAATTCGAATAAATTTTCCCAACAACTTGCAGCGGGTGGAATGTTCCGGAACAATACTCTCAATGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371786.3
ENST00000429260.7
CDS CAA 72 bp GAGAGTATTGTTCCGGAACATTCCACCCGCTGCAAGTaGTTGGGAAAATTTATTCGAATTTGGATAAAATAC +
Preference number: 6 (lower is better)
Translates to: ESIVPEHSTRCK*LGKFIRIWIKY
Trigger: GTATTTTATCCAAATTCGAATAAATTTTCCCAACAACTTGCAGCGGGTGGAATGTTCCGGAACAATACTCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371786.3
ENST00000429260.7