Pregenerated sensors for C9ORF106 (Homo sapiens)
Ensembl gene IDs: ENSG00000179082Ensembl transcript IDs: ENST00000316786.1
Found 31 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GAGGTGGGAGCGCTGGGCCTGGCCCCAGGAGACAGGGGACTGGGCTaGATCCAGCCTCTGTCCTCCCTAGCTGTGGGCTCCTGGGTGCAT | + |
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Preference number: 5 (lower is better) Translates to: EVGALGLAPGDRGLG*IQPLSSLAVGSWVH Trigger: ATGCACCCAGGAGCCCACAGCTAGGGAGGACAGAGGCTGGATCCAGCCCAGTCCCCTGTCTCCTGGGGCCAGGCCCAGCGCTCCCACCTC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000316786.1 |
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| CDS GCA 90 bp | GCCTGGGCAAGGGCCTGGGAGAGAAAAGTGGTGGGTTCCAGGAGCTaGAGGCTTCCTCGCCCACCTCCCCCGACAGGTGAGGTTTATCGC | + |
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Preference number: 5 (lower is better) Translates to: AWARAWERKVVGSRS*RLPRPPPPTGEVYR Trigger: GCGATAAACCTCACCTGTCGGGGGAGGTGGGCGAGGAAGCCTGCAGCTCCTGGAACCCACCACTTTTCTCTCCCAGGCCCTTGCCCAGGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000316786.1 |
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| CDS TCA 90 bp | GGGTTCCAGGAGCTGCAGGCTTCCTCGCCCACCTCCCCCGACAGGTaGGGTTTATCGCTCAAGGCCACATACGCCATCTCACGTGGTCCC | + |
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Preference number: 5 (lower is better) Translates to: GFQELQASSPTSPDR*GLSLKATYAISRGP Trigger: GGGACCACGTGAGATGGCGTATGTGGCCTTGAGCGATAAACCTCACCTGTCGGGGGAGGTGGGCGAGGAAGCCTGCAGCTCCTGGAACCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000316786.1 |
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| CDS GCA 90 bp | ACGTGGTTCCCCACCCATGAGGCTGCTGCTTGCTCCAAGCCTGGGTaGCATGGCCAAGATGGCTCTACCTGGCTGCCAGGGTCACAGAGC | + |
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Preference number: 5 (lower is better) Translates to: TWFPTHEAAACSKPG*HGQDGSTWLPGSQS Trigger: GCTCTGTGACCCTGGCAGCCAGGTAGAGCCATCTTGGCCATGGCACCCAGGCTTGGAGCAAGCAGCAGCCTCATGGGTGGGGAACCACGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000316786.1 |
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| CDS GCA 90 bp | CACAGCCCTGTGTGCAAAGCAGGCAATCAGGGCCTAAGCATGGGGTaGGAAACCCAGAGTGGGCAGAAGAGGACGGGCTGGGCACCAGAG | + |
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Preference number: 5 (lower is better) Translates to: HSPVCKAGNQGLSMG*ETQSGQKRTGWAPE Trigger: CTCTGGTGCCCAGCCCGTCCTCTTCTGCCCACTCTGGGTTTCGCACCCCATGCTTAGGCCCTGATTGCCTGCTTTGCACACAGGGCTGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000316786.1 |
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| CDS CCA 90 bp | CAAAGCAGGCAATCAGGGCCTAAGCATGGGGTGCGAAACCCAGAGTaGGCAGAAGAGGACGGGCTGGGCACCAGAGAGGACTTCCCAGAG | + |
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Preference number: 5 (lower is better) Translates to: QSRQSGPKHGVRNPE*AEEDGLGTREDFPE Trigger: CTCTGGGAAGTCCTCTCTGGTGCCCAGCCCGTCCTCTTCTGCCCACTCTGGGTTTCGCACCCCATGCTTAGGCCCTGATTGCCTGCTTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000316786.1 |
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| CDS GCA 90 bp | CAGGCCAGGCCCTGGCAACACAGCTGTGAACAGCCATGTGGTTCCTaGCCTCATGGAGCTCACAGCCCTGTGTGCAAAGCAGGCAATCAG | + |
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Preference number: 5 (lower is better) Translates to: QARPWQHSCEQPCGS*PHGAHSPVCKAGNQ Trigger: CTGATTGCCTGCTTTGCACACAGGGCTGTGAGCTCCATGAGGGCAGGAACCACATGGCTGTTCACAGCTGTGTTGCCAGGGCCTGGCCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316786.1 |
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| CDS TCA 90 bp | CCAGCAAACTCTAATATCCACGTGCAGGGCCTCTCCGGCAGTGAGTaGCGGCAGTTTTGGTCTTTTGGCGAGACATCAAGCAAGACACTT | + |
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Preference number: 5 (lower is better) Translates to: PANSNIHVQGLSGSE*RQFWSFGETSSKTL Trigger: AAGTGTCTTGCTTGATGTCTCGCCAAAAGACCAAAACTGCCGTCACTCACTGCCGGAGAGGCCCTGCACGTGGATATTAGAGTTTGCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000316786.1 |
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| CDS CCA 90 bp | ATCCAAGGTTCAGAGAGGTCAAATGAGACTCCCAAGGCCACTCAGTaGCAGGGCCAAGCTCTAACCCTGAGAGTCTCTGATTATAACCCC | + |
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Preference number: 5 (lower is better) Translates to: IQGSERSNETPKATQ*QGQALTLRVSDYNP Trigger: GGGGTTATAATCAGAGACTCTCAGGGTTAGAGCTTGGCCCTGCCACTGAGTGGCCTTGGGAGTCTCATTTGACCTCTCTGAACCTTGGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316786.1 |
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| CDS TCA 90 bp | AAGACACTTTCCATGCAGGAACTCAACCTGTCCCCATTTCACAAGTaGGGAATCCAAGGTTCAGAGAGGTCAAATGAGACTCCCAAGGCC | + |
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Preference number: 5 (lower is better) Translates to: KTLSMQELNLSPFHK*GIQGSERSNETPKA Trigger: GGCCTTGGGAGTCTCATTTGACCTCTCTGAACCTTGGATTCCTCACTTGTGAAATGGGGACAGGTTGAGTTCCTGCATGGAAAGTGTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000316786.1 |
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| CDS GCA 90 bp | TCTGAGTCCAGGCATGCTCATGGTCTTTTGAGGAGAGAGATTGATTaGGTTAGGGACCTTGCACCTACAAAATCCATCAGCCTGTACATG | + |
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Preference number: 5 (lower is better) Translates to: SESRHAHGLLRREID*VRDLAPTKSISLYM Trigger: CATGTACAGGCTGATGGATTTTGTAGGTGCAAGGTCCCTAACGCAATCAATCTCTCTCCTCAAAAGACCATGAGCATGCCTGGACTCAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000316786.1 |
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| CDS GCA 72 bp | CTCAAGGCCACATACGCCATCTCACGTGGTCCCCGCTaGCACCTCGTCTCAGCAGTTTCTCCCGGCTTTGCC | + |
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Preference number: 6 (lower is better) Translates to: LKATYAISRGPR*HLVSAVSPGFA Trigger: GGCAAAGCCGGGAGAAACTGCTGAGACGAGGTGGCAGCGGGGACCACGTGAGATGGCGTATGTGGCCTTGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000316786.1 |
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| CDS CCA 72 bp | AGGTTTATCGCTCAAGGCCACATACGCCATCTCACGTaGTCCCCGCTGCCACCTCGTCTCAGCAGTTTCTCC | + |
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Preference number: 6 (lower is better) Translates to: RFIAQGHIRHLT*SPLPPRLSSFS Trigger: GGAGAAACTGCTGAGACGAGGTGGCAGCGGGGACCACGTGAGATGGCGTATGTGGCCTTGAGCGATAAACCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000316786.1 |
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| CDS CCA 72 bp | AGCCTCTCTGCCGGGAGGTCTCATGGTAGTTGCCTCTaGAATATCTCCCTTCCCGCTCCCTCCTTTTTATCC | + |
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Preference number: 6 (lower is better) Translates to: SLSAGRSHGSCL*NISLPAPSFLS Trigger: GGATAAAAAGGAGGGAGCGGGAAGGGAGATATTCCAGAGGCAACTACCATGAGACCTCCCGGCAGAGAGGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000316786.1 |
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| CDS CAA 90 bp | ACGTGCAGGGCCTCTCCGGCAGTGAGTGACGGCAGTTTTGGTCTTTaGGCGAGACATCAAGCAAGACACTTTCCATGCAGGAACTCAACC | + |
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Preference number: 6 (lower is better) Translates to: TCRASPAVSDGSFGL*ARHQARHFPCRNST Trigger: GGTTGAGTTCCTGCATGGAAAGTGTCTTGCTTGATGTCTCGCCAAAAGACCAAAACTGCCGTCACTCACTGCCGGAGAGGCCCTGCACGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000316786.1 |
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| CDS TCA 72 bp | TCACAAGTGAGGAATCCAAGGTTCAGAGAGGTCAAATaGGACTCCCAAGGCCACTCAGTGGCAGGGCCAAGC | + |
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Preference number: 6 (lower is better) Translates to: SQVRNPRFREVK*DSQGHSVAGPS Trigger: GCTTGGCCCTGCCACTGAGTGGCCTTGGGAGTCTCATTTGACCTCTCTGAACCTTGGATTCCTCACTTGTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316786.1 |
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| CDS TCA 72 bp | TCTAATATCCACGTGCAGGGCCTCTCCGGCAGTGAGTaGCGGCAGTTTTGGTCTTTTGGCGAGACATCAAGC | + |
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Preference number: 6 (lower is better) Translates to: SNIHVQGLSGSE*RQFWSFGETSS Trigger: GCTTGATGTCTCGCCAAAAGACCAAAACTGCCGTCACTCACTGCCGGAGAGGCCCTGCACGTGGATATTAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000316786.1 |
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| CDS GCA 72 bp | TTTTCAAGCCTCTCTGCCGGGAGGTCTCATGGTAGTTaGCTCTGGAATATCTCCCTTCCCGCTCCCTCCTTT | + |
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Preference number: 6 (lower is better) Translates to: FSSLSAGRSHGS*LWNISLPAPSF Trigger: AAAGGAGGGAGCGGGAAGGGAGATATTCCAGAGGCAACTACCATGAGACCTCCCGGCAGAGAGGCTTGAAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000316786.1 |
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| CDS CCA 72 bp | TCAGAGAGGTCAAATGAGACTCCCAAGGCCACTCAGTaGCAGGGCCAAGCTCTAACCCTGAGAGTCTCTGAT | + |
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Preference number: 6 (lower is better) Translates to: SERSNETPKATQ*QGQALTLRVSD Trigger: ATCAGAGACTCTCAGGGTTAGAGCTTGGCCCTGCCACTGAGTGGCCTTGGGAGTCTCATTTGACCTCTCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316786.1 |
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| CDS CAA 72 bp | GCCTCTCCGGCAGTGAGTGACGGCAGTTTTGGTCTTTaGGCGAGACATCAAGCAAGACACTTTCCATGCAGG | + |
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Preference number: 6 (lower is better) Translates to: ASPAVSDGSFGL*ARHQARHFPCR Trigger: CCTGCATGGAAAGTGTCTTGCTTGATGTCTCGCCAAAAGACCAAAACTGCCGTCACTCACTGCCGGAGAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000316786.1 |
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| CDS CAA 90 bp | CCCCCACACACGGTGCTCTCTGAGTCCAGGCATGCTCATGGTCTTTaGAGGAGAGAGATTGATTGCGTTAGGGACCTTGCACCTACAAAA | + |
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Preference number: 6 (lower is better) Translates to: PPHTVLSESRHAHGL*RREIDCVRDLAPTK Trigger: TTTTGTAGGTGCAAGGTCCCTAACGCAATCAATCTCTCTCCTCAAAAGACCATGAGCATGCCTGGACTCAGAGAGCACCGTGTGTGGGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000316786.1 |
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| CDS TCA 72 bp | GTCTCTTCATCTGAAATGTGTCCAGCAAAGCTTTATTaGCTAGCTGCTCCATGCGGGGCTGATGCTGGGTGC | + |
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Preference number: 6 (lower is better) Translates to: VSSSEMCPAKLY*LAAPCGADAGC Trigger: GCACCCAGCATCAGCCCCGCATGGAGCAGCTAGTCAATAAAGCTTTGCTGGACACATTTCAGATGAAGAGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000316786.1 |
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| CDS GCA 72 bp | AGGACAAACAAAACCCAGCAAACTCTAATATCCACGTaGAGGGCCTCTCCGGCAGTGAGTGACGGCAGTTTT | + |
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Preference number: 6 (lower is better) Translates to: RTNKTQQTLIST*RASPAVSDGSF Trigger: AAAACTGCCGTCACTCACTGCCGGAGAGGCCCTGCACGTGGATATTAGAGTTTGCTGGGTTTTGTTTGTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000316786.1 |
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| CDS CCA 72 bp | GGGACCTTGCACCTACAAAATCCATCAGCCTGTACATaGACGGACATTCGCTCAGGACAAACAAAACCCAGC | + |
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Preference number: 6 (lower is better) Translates to: GTLHLQNPSACT*TDIRSGQTKPS Trigger: GCTGGGTTTTGTTTGTCCTGAGCGAATGTCCGTCCATGTACAGGCTGATGGATTTTGTAGGTGCAAGGTCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000316786.1 |
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| CDS CAA 72 bp | ACGGTGCTCTCTGAGTCCAGGCATGCTCATGGTCTTTaGAGGAGAGAGATTGATTGCGTTAGGGACCTTGCA | + |
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Preference number: 6 (lower is better) Translates to: TVLSESRHAHGL*RREIDCVRDLA Trigger: TGCAAGGTCCCTAACGCAATCAATCTCTCTCCTCAAAAGACCATGAGCATGCCTGGACTCAGAGAGCACCGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316786.1 |
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| CDS TCA 72 bp | GATTCTGCCATCAGCTCTAAGGAAATAATGCAGGGATaGAATAATCCCTTTCTCGGGTGGGGCTCAGGGTGG | + |
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Preference number: 6 (lower is better) Translates to: DSAISSKEIMQG*NNPFLGWGSGW Trigger: CCACCCTGAGCCCCACCCGAGAAAGGGATTATTTCATCCCTGCATTATTTCCTTAGAGCTGATGGCAGAATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000316786.1 |
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| CDS GCA 72 bp | AATCAGGTCACGCAAAACCGAGTGACTCTAGAAGAATaGAGCTTCTCTGAGACTGAGCTAACTCTGGCCAAC | + |
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Preference number: 6 (lower is better) Translates to: NQVTQNRVTLEE*SFSETELTLAN Trigger: GTTGGCCAGAGTTAGCTCAGTCTCAGAGAAGCTGCATTCTTCTAGAGTCACTCGGTTTTGCGTGACCTGATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000316786.1 |
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| CDS GCA 72 bp | GGTCTTTTGGCGAGACATCAAGCAAGACACTTTCCATaGAGGAACTCAACCTGTCCCCATTTCACAAGTGAG | + |
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Preference number: 6 (lower is better) Translates to: GLLARHQARHFP*RNSTCPHFTSE Trigger: CTCACTTGTGAAATGGGGACAGGTTGAGTTCCTGCATGGAAAGTGTCTTGCTTGATGTCTCGCCAAAAGACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000316786.1 |
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| CDS TCA 72 bp | AGCTCACTCCTAACGGGGAGACAGCGAATTTGGAGATaGGCAGATTCTGCCATCAGCTCTAAGGAAATAATG | + |
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Preference number: 6 (lower is better) Translates to: SSLLTGRQRIWR*ADSAISSKEIM Trigger: CATTATTTCCTTAGAGCTGATGGCAGAATCTGCTCATCTCCAAATTCGCTGTCTCCCCGTTAGGAGTGAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000316786.1 |
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| CDS CAA 90 bp | AGCACTGTACTGAGCCACATATTAATGAACAGGAATTCAGGACATTaGGAAACCAAATTCCAAAGGCTCCAGGGTAAGGAGAGAGAGATG | + |
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Preference number: 6 (lower is better) Translates to: STVLSHILMNRNSGH*ETKFQRLQGKEREM Trigger: CATCTCTCTCTCCTTACCCTGGAGCCTTTGGAATTTGGTTTCCAAATGTCCTGAATTCCTGTTCATTAATATGTGGCTCAGTACAGTGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316786.1 |
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| CDS CAA 72 bp | CTGAGCCACATATTAATGAACAGGAATTCAGGACATTaGGAAACCAAATTCCAAAGGCTCCAGGGTAAGGAG | + |
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Preference number: 6 (lower is better) Translates to: LSHILMNRNSGH*ETKFQRLQGKE Trigger: CTCCTTACCCTGGAGCCTTTGGAATTTGGTTTCCAAATGTCCTGAATTCCTGTTCATTAATATGTGGCTCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316786.1 |
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