Pregenerated sensors for C8ORF89 (Homo sapiens)
Ensembl gene IDs: ENSG00000274443Ensembl transcript IDs: ENST00000613105.4, ENST00000624510.3, ENST00000625134.1
Found 16 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TTGATTTTGTGGTTGTTTCCTGACGAATGGTATCATATTCCAATATaGCTATTTTGGAAAGTCTCTCTAAGTATTGAGATGGTGCTCCAG | + |
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Preference number: 1 (lower is better) Translates to: LILWLFPDEWYHIPI*LFWKVSLSIEMVLQ Trigger: CTGGAGCACCATCTCAATACTTAGAGAGACTTTCCAAAATAGCCATATTGGAATATGATACCATTCGTCAGGAAACAACCACAAAATCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000613105.4 ENST00000625134.1 |
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| 3UTR-3UTR TCA 90 bp | CTGAAGAAAGCATCACACTGTACGACATTTTTCAGCGGTCTCGGAGGTCTCGTTGAAGCCAGAACCTTTTaGTTTCTCCCAAAGTGGTGC | + |
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Preference number: 2 (lower is better) Translates to: LKKASHCTTFFSGLGGLVEARTF*FLPKWC Trigger: GCACCACTTTGGGAGAAATCAAAAGGTTCTGGCTTC...AACGAGACCTCCGAGACCGCTGAAAAATGTCGTACAGTGTGATGCTTTCTTCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000613105.4 |
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| 3UTR-3UTR CCA 90 bp | AAAGCATCACACTGTACGACATTTTTCAGCGGTCTCGGAGGTCTCGTTTCTTGCTTGTTTCCTGACGAATaGTATCATATTCCAATATGG | + |
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Preference number: 2 (lower is better) Translates to: KASHCTTFFSGLGGLVSCLFPDE*YHIPIW Trigger: CCATATTGGAATATGATACCATTCGTCAGGAAACAA...GCAAGAAACGAGACCTCCGAGACCGCTGAAAAATGTCGTACAGTGTGATGCTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000613105.4 ENST00000625134.1 |
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| 3UTR CCA 72 bp | TGGTTGTTTCCTGACGAATGGTATCATATTCCAATATaGCTATTTTGGAAAGTCTCTCTAAGTATTGAGATG | + |
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Preference number: 3 (lower is better) Translates to: WLFPDEWYHIPI*LFWKVSLSIEM Trigger: CATCTCAATACTTAGAGAGACTTTCCAAAATAGCCATATTGGAATATGATACCATTCGTCAGGAAACAACCA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000613105.4 ENST00000625134.1 |
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| CDS-3UTR TCA 90 bp | GAAAGCATCACACTGTACGACATTTTTCAGCGGTCTCGGAGGTCTCGTTTCTTGTTTGTGGTTGTTTCCTaGCGAATGGTATCATATTCC | + |
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Preference number: 4 (lower is better) Translates to: ESITLYDIFQRSRRSRFLFVVVS*RMVSYS Trigger: GGAATATGATACCATTCGTCAGGAAACAACCACAAA...CAAGAAACGAGACCTCCGAGACCGCTGAAAAATGTCGTACAGTGTGATGCTTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000613105.4 ENST00000625134.1 |
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| CDS-3UTR TCA 90 bp | CCTGACGAATGGTATCATATTCCAATATGGCTATTTTGGAAAGTCTCTCTAAGTACTGAAGCCAGAACCTaGCTGCAGACACCTCGGCAT | + |
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Preference number: 4 (lower is better) Translates to: PDEWYHIPIWLFWKVSLSTEART*LQTPRH Trigger: ATGCCGAGGTGTCTGCAGTCAGGTTCTGGCTTCAGT...ACTTAGAGAGACTTTCCAAAATAGCCATATTGGAATATGATACCATTCGTCAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000625134.1 |
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| CDS-3UTR GCA 90 bp | TGTTTCCTGACGAATGGTATCATATTCCAATATGGCTATTTTGGAAAGTCTCTCAAGCCAGAACCTGACTaGAGACACCTCGGCATCAGC | + |
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Preference number: 4 (lower is better) Translates to: CFLTNGIIFQYGYFGKSLKPEPD*RHLGIS Trigger: GCTGATGCCGAGGTGTCTGCAGTCAGGTTCTGGCTT...GAGAGACTTTCCAAAATAGCCATATTGGAATATGATACCATTCGTCAGGAAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000625134.1 |
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| CDS-3UTR TCA 90 bp | GGTTGTTTCCTGACGAATGGTATCATATTCCAATATGGCTATTTTGGAAAGTCTGAAGCCAGAACCTTTTaGTTTCTCCCAAAGTGGTGC | + |
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Preference number: 4 (lower is better) Translates to: GCFLTNGIIFQYGYFGKSEARTF*FLPKWC Trigger: GCACCACTTTGGGAGAAATCAAAAGGTTCTGGCTTC...AGACTTTCCAAAATAGCCATATTGGAATATGATACCATTCGTCAGGAAACAACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000613105.4 |
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| CDS-3UTR TCA 90 bp | TTTTGTGGTTGTTTCCTGACGAATGGTATCATATTCCAATATGGCTATTTTGGATTTGTGGTTGTTTCCTaGCGAATGGTATCATATTCC | + |
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Preference number: 4 (lower is better) Translates to: FCGCFLTNGIIFQYGYFGFVVVS*RMVSYS Trigger: GGAATATGATACCATTCGTCAGGAAACAACCACAAA...TCCAAAATAGCCATATTGGAATATGATACCATTCGTCAGGAAACAACCACAAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000613105.4 ENST00000625134.1 |
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| CDS-3UTR CAA 90 bp | AAAGCATCACACTGTACGACATTTTTCAGCGGTCTCGGAGGTCTCGTTTCTTGCTTAGAAGTCTCACATTaGATTTCAGGAGATAGCACT | + |
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Preference number: 5 (lower is better) Translates to: KASHCTTFFSGLGGLVSCLEVSH*ISGDST Trigger: AGTGCTATCTCCTGAAATCAAATGTGAGACTTCTAA...GCAAGAAACGAGACCTCCGAGACCGCTGAAAAATGTCGTACAGTGTGATGCTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000613105.4 ENST00000625134.1 |
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| CDS-3UTR CAA 90 bp | AAAGCATCACACTGTACGACATTTTTCAGCGGTCTCGGAGGTCTCGTTTCTTGCGGTAAATATGGCATTTaGATACATTCCTTGAGCTCT | + |
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Preference number: 5 (lower is better) Translates to: KASHCTTFFSGLGGLVSCGKYGI*IHSLSS Trigger: AGAGCTCAAGGAATGTATCAAAATGCCATATTTACC...GCAAGAAACGAGACCTCCGAGACCGCTGAAAAATGTCGTACAGTGTGATGCTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000613105.4 ENST00000625134.1 |
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| CDS-3UTR CAA 90 bp | ATCACACTGTACGACATTTTTCAGCGGTCTCGGAGGTCTCGTTTCTTGCTTTTTTTCTTTAGCACTTTTTaGGCAACTTTGCAGTCCTGG | + |
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Preference number: 5 (lower is better) Translates to: ITLYDIFQRSRRSRFLLFFFSTF*ATLQSW Trigger: CCAGGACTGCAAAGTTGCCAAAAAAGTGCTAAAGAA...AAAAAGCAAGAAACGAGACCTCCGAGACCGCTGAAAAATGTCGTACAGTGTGAT 43% GC, longest homopolymer 7 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000613105.4 |
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| CDS-3UTR CAA 90 bp | AAGAAAGCATCACACTGTACGACATTTTTCAGCGGTCTCGGAGGTCTCGTTTCTTTAGAAGTCTCACATTaGATTTCAGGAGATAGCACT | + |
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Preference number: 5 (lower is better) Translates to: KKASHCTTFFSGLGGLVSLEVSH*ISGDST Trigger: AGTGCTATCTCCTGAAATCAAATGTGAGACTTCTAA...AGAAACGAGACCTCCGAGACCGCTGAAAAATGTCGTACAGTGTGATGCTTTCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000613105.4 ENST00000625134.1 |
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| CDS-3UTR CAA 90 bp | ATCACACTGTACGACATTTTTCAGCGGTCTCGGAGGTCTCGTTTCTTGCTTTTTGGTAAATATGGCATTTaGATACATTCCTTGAGCTCT | + |
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Preference number: 5 (lower is better) Translates to: ITLYDIFQRSRRSRFLLFGKYGI*IHSLSS Trigger: AGAGCTCAAGGAATGTATCAAAATGCCATATTTACC...AAAAAGCAAGAAACGAGACCTCCGAGACCGCTGAAAAATGTCGTACAGTGTGAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000613105.4 ENST00000625134.1 |
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| CDS CAA 72 bp | TTTTGGCAACTTTGCAGTCCTGGTAAATATGGCATTTaGATACATTCCTTGAGCTCTTCTAGACCAAATGCT | + |
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Preference number: 6 (lower is better) Translates to: FWQLCSPGKYGI*IHSLSSSRPNA Trigger: AGCATTTGGTCTAGAAGAGCTCAAGGAATGTATCAAAATGCCATATTTACCAGGACTGCAAAGTTGCCAAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000613105.4 ENST00000624510.3 ENST00000625134.1 |
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| CDS CAA 90 bp | TGGCAACTTTGCAGTCCTGGTAAATATGGCATTTTGATACATTCCTaGAGCTCTTCTAGACCAAATGCTGTGGTATATTCTTTCTTAATC | + |
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Preference number: 6 (lower is better) Translates to: WQLCSPGKYGILIHS*SSSRPNAVVYSFLI Trigger: GATTAAGAAAGAATATACCACAGCATTTGGTCTAGAAGAGCTCAAGGAATGTATCAAAATGCCATATTTACCAGGACTGCAAAGTTGCCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000613105.4 ENST00000624510.3 ENST00000625134.1 |
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