Pregenerated sensors for C8ORF87 (Homo sapiens)
Ensembl gene IDs: ENSG00000279847Ensembl transcript IDs: ENST00000521906.5, ENST00000522116.1, ENST00000625010.1
Found 21 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | TCATTAATTCCACTGCCACTGATGGGCTCTGAAGACACTCACTGTTaGCTCCATAGGCAGAGCCCATCCTCGGGCGGCAGATATTCTTTC | + |
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Preference number: 5 (lower is better) Translates to: SLIPLPLMGSEDTHC*LHRQSPSSGGRYSF Trigger: GAAAGAATATCTGCCGCCCGAGGATGGGCTCTGCCTATGGAGGCAACAGTGAGTGTCTTCAGAGCCCATCAGTGGCAGTGGAATTAATGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000521906.5 ENST00000522116.1 |
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| CDS CCA 90 bp | CACCGTTTCACCATATGCCGTGTGTCGAGAGACACAGTGGTCAACTaGAGAGTCAAGGTTTCTCCCCTCAGGCTCACTTTTGGGAAGAAG | + |
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Preference number: 5 (lower is better) Translates to: HRFTICRVSRDTVVN*RVKVSPLRLTFGKK Trigger: CTTCTTCCCAAAAGTGAGCCTGAGGGGAGAAACCTTGACTCTCCAGTTGACCACTGTGTCTCTCGACACACGGCATATGGTGAAACGGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000522116.1 |
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| CDS GCA 90 bp | TCACTTTTGTCTTTGGAGATCGGGTTCTCTTTGGAGTTCGCATGCTaGTGGATGAATGCTGTCAAAGTCCTGGCCCATGCTTGCTTGCCC | + |
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Preference number: 5 (lower is better) Translates to: SLLSLEIGFSLEFAC*WMNAVKVLAHACLP Trigger: GGGCAAGCAAGCATGGGCCAGGACTTTGACAGCATTCATCCAGCAGCATGCGAACTCCAAAGAGAACCCGATCTCCAAAGACAAAAGTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000521906.5 |
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| CDS CCA 90 bp | CACCGTTTCACCATATGCCGTGTGTCGAGAGACACAGTGGTCAACTaGAGAGTCAAGGTTTCTCCCCTCAGGCTCACTTTTGTCTTTGGA | + |
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Preference number: 5 (lower is better) Translates to: HRFTICRVSRDTVVN*RVKVSPLRLTFVFG Trigger: TCCAAAGACAAAAGTGAGCCTGAGGGGAGAAACCTTGACTCTCCAGTTGACCACTGTGTCTCTCGACACACGGCATATGGTGAAACGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000521906.5 |
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| CDS TCA 90 bp | TGTCTTTGGAGATCGGGTTCTCTTTGGAGTTCGCATGCTGCTGGATaGATGCTGTCAAAGTCCTGGCCCATGCTTGCTTGCCCTCTAAAT | + |
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Preference number: 5 (lower is better) Translates to: CLWRSGSLWSSHAAG*MLSKSWPMLACPLN Trigger: ATTTAGAGGGCAAGCAAGCATGGGCCAGGACTTTGACAGCATTCATCCAGCAGCATGCGAACTCCAAAGAGAACCCGATCTCCAAAGACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000521906.5 |
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| CDS GCA 90 bp | TTCGCATGCTGCTGGATGAATGCTGTCAAAGTCCTGGCCCATGCTTaGTTGCCCTCTAAATCCTCTGCCCTAGCTTCTTGTTGCTTTGAT | + |
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Preference number: 5 (lower is better) Translates to: FACCWMNAVKVLAHA*LPSKSSALASCCFD Trigger: ATCAAAGCAACAAGAAGCTAGGGCAGAGGATTTAGAGGGCAAGCAAGCATGGGCCAGGACTTTGACAGCATTCATCCAGCAGCATGCGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000521906.5 |
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| CDS GCA 72 bp | CGGGTTCTCTTTGGAGTTCGCATGCTGCTGGATGAATaGTGTCAAAGTCCTGGCCCATGCTTGCTTGCCCTC | + |
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Preference number: 6 (lower is better) Translates to: RVLFGVRMLLDE*CQSPGPCLLAL Trigger: GAGGGCAAGCAAGCATGGGCCAGGACTTTGACAGCATTCATCCAGCAGCATGCGAACTCCAAAGAGAACCCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000521906.5 |
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| CDS GCA 72 bp | GGCCTTCCATGCCTCTCATCACACCGTTTCACCATATaGCGTGTGTCGAGAGACACAGTGGTCAACTGGAGA | + |
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Preference number: 6 (lower is better) Translates to: GLPCLSSHRFTI*RVSRDTVVNWR Trigger: TCTCCAGTTGACCACTGTGTCTCTCGACACACGGCATATGGTGAAACGGTGTGATGAGAGGCATGGAAGGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000521906.5 ENST00000522116.1 ENST00000625010.1 |
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| CDS CCA 72 bp | ACCGTTTCACCATATGCCGTGTGTCGAGAGACACAGTaGTCAACTGGAGAGTCAAGGTTTCTCCCCTCAGGC | + |
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Preference number: 6 (lower is better) Translates to: TVSPYAVCRETQ*STGESRFLPSG Trigger: GCCTGAGGGGAGAAACCTTGACTCTCCAGTTGACCACTGTGTCTCTCGACACACGGCATATGGTGAAACGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000521906.5 ENST00000522116.1 ENST00000625010.1 |
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| CDS CCA 72 bp | GAAGGTTCCCCTCGCCACACTCTGACCAAATGTAACTaGGGTTCCTCCAGTGATTGTCCCACATGTGGTCAC | + |
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Preference number: 6 (lower is better) Translates to: EGSPRHTLTKCN*GSSSDCPTCGH Trigger: GTGACCACATGTGGGACAATCACTGGAGGAACCCCAGTTACATTTGGTCAGAGTGTGGCGAGGGGAACCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000521906.5 |
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| CDS CAA 90 bp | CAGTGGTCAACTGGAGAGTCAAGGTTTCTCCCCTCAGGCTCACTTTaGTCTTTGGAGATCGGGTTCTCTTTGGAGTTCGCATGCTGCTGG | + |
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Preference number: 6 (lower is better) Translates to: QWSTGESRFLPSGSL*SLEIGFSLEFACCW Trigger: CCAGCAGCATGCGAACTCCAAAGAGAACCCGATCTCCAAAGACAAAAGTGAGCCTGAGGGGAGAAACCTTGACTCTCCAGTTGACCACTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000521906.5 |
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| CDS CAA 90 bp | TTTCTCCCCTCAGGCTCACTTTTGTCTTTGGAGATCGGGTTCTCTTaGGAGTTCGCATGCTGCTGGATGAATGCTGTCAAAGTCCTGGCC | + |
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Preference number: 6 (lower is better) Translates to: FLPSGSLLSLEIGFS*EFACCWMNAVKVLA Trigger: GGCCAGGACTTTGACAGCATTCATCCAGCAGCATGCGAACTCCAAAGAGAACCCGATCTCCAAAGACAAAAGTGAGCCTGAGGGGAGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000521906.5 |
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| CDS CCA 72 bp | ACCATATGCCGTGTGTCGAGAGACACAGTGGTCAACTaGAGAGTCAAGGTTTCTCCCCTCAGGCTCACTTTT | + |
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Preference number: 6 (lower is better) Translates to: TICRVSRDTVVN*RVKVSPLRLTF Trigger: AAAAGTGAGCCTGAGGGGAGAAACCTTGACTCTCCAGTTGACCACTGTGTCTCTCGACACACGGCATATGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000521906.5 ENST00000522116.1 |
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| CDS GCA 72 bp | TTGTCTTTGGAGATCGGGTTCTCTTTGGAGTTCGCATaGTGCTGGATGAATGCTGTCAAAGTCCTGGCCCAT | + |
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Preference number: 6 (lower is better) Translates to: LSLEIGFSLEFA*CWMNAVKVLAH Trigger: ATGGGCCAGGACTTTGACAGCATTCATCCAGCAGCATGCGAACTCCAAAGAGAACCCGATCTCCAAAGACAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000521906.5 |
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| CDS CCA 72 bp | AGTCAAGGTTTCTCCCCTCAGGCTCACTTTTGTCTTTaGAGATCGGGTTCTCTTTGGAGTTCGCATGCTGCT | + |
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Preference number: 6 (lower is better) Translates to: SQGFSPQAHFCL*RSGSLWSSHAA Trigger: AGCAGCATGCGAACTCCAAAGAGAACCCGATCTCCAAAGACAAAAGTGAGCCTGAGGGGAGAAACCTTGACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000521906.5 |
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| CDS CAA 72 bp | ACTGGAGAGTCAAGGTTTCTCCCCTCAGGCTCACTTTaGTCTTTGGAGATCGGGTTCTCTTTGGAGTTCGCA | + |
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Preference number: 6 (lower is better) Translates to: TGESRFLPSGSL*SLEIGFSLEFA Trigger: TGCGAACTCCAAAGAGAACCCGATCTCCAAAGACAAAAGTGAGCCTGAGGGGAGAAACCTTGACTCTCCAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000521906.5 |
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| CDS CAA 72 bp | CTGTGTCTGCTGTTCCCCGAACTGCCTTCTTTGAAGTaGCAGAGCCATGCTGAGATTCCTGTGAATGAGGTA | + |
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Preference number: 6 (lower is better) Translates to: LCLLFPELPSLK*QSHAEIPVNEV Trigger: TACCTCATTCACAGGAATCTCAGCATGGCTCTGCAACTTCAAAGAAGGCAGTTCGGGGAACAGCAGACACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000521906.5 ENST00000522116.1 ENST00000625010.1 |
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| CDS CAA 72 bp | AAGGAGCTGTGTCTGCTGTTCCCCGAACTGCCTTCTTaGAAGTTGCAGAGCCATGCTGAGATTCCTGTGAAT | + |
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Preference number: 6 (lower is better) Translates to: KELCLLFPELPS*KLQSHAEIPVN Trigger: ATTCACAGGAATCTCAGCATGGCTCTGCAACTTCAAAGAAGGCAGTTCGGGGAACAGCAGACACAGCTCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000521906.5 ENST00000522116.1 ENST00000625010.1 |
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| CDS CAA 90 bp | TCAACTGGAGAGTCAAGGTTTCTCCCCTCAGGCTCACTTTTGTCTTaGGAGATCGGGTTCTCTTTGGAGTTCGCATGCTGCTGGATGAAT | + |
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Preference number: 6 (lower is better) Translates to: STGESRFLPSGSLLS*EIGFSLEFACCWMN Trigger: ATTCATCCAGCAGCATGCGAACTCCAAAGAGAACCCGATCTCCAAAGACAAAAGTGAGCCTGAGGGGAGAAACCTTGACTCTCCAGTTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000521906.5 |
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| CDS CAA 90 bp | TTCTTTCCAAAGGAGCTGTGTCTGCTGTTCCCCGAACTGCCTTCTTaGAAGTTGCAGAGCCATGCTGAGATTCCTGTGAATGAGGTAATG | + |
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Preference number: 6 (lower is better) Translates to: FFPKELCLLFPELPS*KLQSHAEIPVNEVM Trigger: CATTACCTCATTCACAGGAATCTCAGCATGGCTCTGCAACTTCAAAGAAGGCAGTTCGGGGAACAGCAGACACAGCTCCTTTGGAAAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000521906.5 ENST00000522116.1 ENST00000625010.1 |
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| CDS CAA 72 bp | TCAGGCTCACTTTTGTCTTTGGAGATCGGGTTCTCTTaGGAGTTCGCATGCTGCTGGATGAATGCTGTCAAA | + |
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Preference number: 6 (lower is better) Translates to: SGSLLSLEIGFS*EFACCWMNAVK Trigger: TTTGACAGCATTCATCCAGCAGCATGCGAACTCCAAAGAGAACCCGATCTCCAAAGACAAAAGTGAGCCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000521906.5 |
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