Pregenerated sensors for C8ORF76 (Homo sapiens)
Ensembl gene IDs: ENSG00000189376Ensembl transcript IDs: ENST00000276704.6, ENST00000517760.1, ENST00000518996.1, ENST00000519791.5, ENST00000521310.5, ENST00000522477.1, ENST00000523726.1
Found 11 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GCACTCCAGCATGGGCAACAAACTCCACCTGCGGCTCGCAGAGCTTaGCGCAGTAGGACGCGGGCGGTCCTGACCGCCGCTCCGGCCTCT | + |
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Preference number: 5 (lower is better) Translates to: ALQHGQQTPPAARRA*RSRTRAVLTAAPAS Trigger: AGAGGCCGGAGCGGCGGTCAGGACCGCCCGCGTCCTACTGCGCCAAGCTCTGCGAGCCGCAGGTGGAGTTTGTTGCCCATGCTGGAGTGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000522477.1 |
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| CDS TCA 90 bp | AAGGATTTGATAGTTTTGTCACTTGAGGTGAAACTGTGCTGTTTCTaGGATGACGCAAGTGCTGCTGAAAGAGCTGGCCCCAGATTCAGG | + |
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Preference number: 5 (lower is better) Translates to: KDLIVLSLEVKLCCF*DDASAAERAGPRFR Trigger: CCTGAATCTGGGGCCAGCTCTTTCAGCAGCACTTGCGTCATCTCAGAAACAGCACAGTTTCACCTCAAGTGACAAAACTATCAAATCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000276704.6 ENST00000518996.1 ENST00000521310.5 |
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| CDS TCA 90 bp | GAAATGGTCTTTGATCTTTCTGAACCACTTGTCTTCAAATTCTTCTaGGGATACAGTCACCAAGGCAGTCAGGGCTACGGAGCCAACACA | + |
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Preference number: 5 (lower is better) Translates to: EMVFDLSEPLVFKFF*GYSHQGSQGYGANT Trigger: TGTGTTGGCTCCGTAGCCCTGACTGCCTTGGTGACTGTATCCTCAGAAGAATTTGAAGACAAGTGGTTCAGAAAGATCAAAGACCATTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000276704.6 |
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| CDS CCA 72 bp | CATGGGCAACAAACTCCACCTGCGGCTCGCAGAGCTTaGCGCAGTAGGACGCGGGCGGTCCTGACCGCCGCT | + |
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Preference number: 6 (lower is better) Translates to: HGQQTPPAARRA*RSRTRAVLTAA Trigger: AGCGGCGGTCAGGACCGCCCGCGTCCTACTGCGCCAAGCTCTGCGAGCCGCAGGTGGAGTTTGTTGCCCATG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000522477.1 |
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| CDS CCA 72 bp | CTGTTTCTTCATAAAACCACTGCGGCTCGCAGAGCTTaGCGCAGTAGGACGCGGGCGGTCCTGACCGCCGCT | + |
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Preference number: 6 (lower is better) Translates to: LFLHKTTAARRA*RSRTRAVLTAA Trigger: AGCGGCGGTCAGGACCGCCCGCGTCCTACTGCGCCAAGCTCTGCGAGCCGCAGTGGTTTTATGAAGAAACAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000276704.6 ENST00000519791.5 ENST00000521310.5 ENST00000523726.1 |
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| CDS TCA 72 bp | ATAGTTTTGTCACTTGAGGTGAAACTGTGCTGTTTCTaGGATGACGCAAGTGCTGCTGAAAGAGCTGGCCCC | + |
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Preference number: 6 (lower is better) Translates to: IVLSLEVKLCCF*DDASAAERAGP Trigger: GGGGCCAGCTCTTTCAGCAGCACTTGCGTCATCTCAGAAACAGCACAGTTTCACCTCAAGTGACAAAACTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000276704.6 ENST00000517760.1 ENST00000518996.1 ENST00000521310.5 |
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| CDS CAA 90 bp | AAGAGCCCACTTCAAGCACCATATGTTGAATTCTACCTGATACTCTaGTCGTCTGTAGGCCAGGTCTCCTTTGAATTTCTTGAGAGTCAG | + |
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Preference number: 6 (lower is better) Translates to: KSPLQAPYVEFYLIL*SSVGQVSFEFLESQ Trigger: CTGACTCTCAAGAAATTCAAAGGAGACCTGGCCTACAGACGACAAGAGTATCAGGTAGAATTCAACATATGGTGCTTGAAGTGGGCTCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000523726.1 |
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| CDS TCA 72 bp | TTTGATCTTTCTGAACCACTTGTCTTCAAATTCTTCTaGGGATACAGTCACCAAGGCAGTCAGGGCTACGGA | + |
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Preference number: 6 (lower is better) Translates to: FDLSEPLVFKFF*GYSHQGSQGYG Trigger: TCCGTAGCCCTGACTGCCTTGGTGACTGTATCCTCAGAAGAATTTGAAGACAAGTGGTTCAGAAAGATCAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000276704.6 |
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| CDS GCA 72 bp | CTGAAGCAGAAGCCTGGTTCGTATAAAAGAGGCACATaGTTTCAGCTGAGTCTCTATCAACACTGTTTCTCT | + |
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Preference number: 6 (lower is better) Translates to: LKQKPGSYKRGT*FQLSLYQHCFS Trigger: AGAGAAACAGTGTTGATAGAGACTCAGCTGAAAGCATGTGCCTCTTTTATACGAACCAGGCTTCTGCTTCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000276704.6 ENST00000517760.1 ENST00000521310.5 |
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| CDS CCA 72 bp | TGGCAAAATTGGTTGATGACAATTTTTCAGAGATACTaGAATACTCCTGCAGTGCTTTCTGATACTCTTGTC | + |
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Preference number: 6 (lower is better) Translates to: WQNWLMTIFQRY*NTPAVLSDTLV Trigger: GACAAGAGTATCAGAAAGCACTGCAGGAGTATTCCAGTATCTCTGAAAAATTGTCATCAACCAATTTTGCCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000276704.6 ENST00000518996.1 ENST00000519791.5 ENST00000521310.5 |
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| CDS CCA 72 bp | AAATCATACAGAGCCAAGCAGAAAAGAACGGAAACTTaGGAGCCTCAGATTATAAACACACATCACAAAAGA | + |
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Preference number: 6 (lower is better) Translates to: KSYRAKQKRTET*EPQIINTHHKR Trigger: TCTTTTGTGATGTGTGTTTATAATCTGAGGCTCCCAAGTTTCCGTTCTTTTCTGCTTGGCTCTGTATGATTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000523726.1 |
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