RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for C8ORF58 (Homo sapiens)

Ensembl gene IDs: ENSG00000241852

Ensembl transcript IDs: ENST00000289989.10, ENST00000409586.7, ENST00000453427.2, ENST00000475994.1, ENST00000495957.1, ENST00000614574.4, ENST00000615223.2

Found 432 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TCCTCATTCCTTGTGCAGTCTTCAGGAGTCCGGGGCAAGATTCCATaGAGAGGCAGCCAAAGCCACACCGTTCTCTGTCCCAGGGCTGCC +
Preference number: 1 (lower is better)
Translates to: SSFLVQSSGVRGKIP*RGSQSHTVLCPRAA
Trigger: GGCAGCCCTGGGACAGAGAACGGTGTGGCTTTGGCTGCCTCTGCATGGAATCTTGCCCCGGACTCCTGAAGACTGCACAAGGAATGAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
3UTR CCA 90 bp CAGGGATTTCTGGTGAGGAGGAAGAGCCCTGGAGCTGCGGCATCTTaGGGGCCTCTCAAGAAACCAAGGTTCCTGACCAGACTGCTTAGA +
Preference number: 1 (lower is better)
Translates to: QGFLVRRKSPGAAAS*GPLKKPRFLTRLLR
Trigger: TCTAAGCAGTCTGGTCAGGAACCTTGGTTTCTTGAGAGGCCCCCAAGATGCCGCAGCTCCAGGGCTCTTCCTCCTCACCAGAAATCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
3UTR GCA 90 bp AAGTTATTCAGTTCCCAGGTTGTCCCTGATCTTCCTCATTCCTTGTaGAGTCTTCAGGAGTCCGGGGCAAGATTCCATGCAGAGGCAGCC +
Preference number: 1 (lower is better)
Translates to: KLFSSQVVPDLPHSL*SLQESGARFHAEAA
Trigger: GGCTGCCTCTGCATGGAATCTTGCCCCGGACTCCTGAAGACTGCACAAGGAATGAGGAAGATCAGGGACAACCTGGGAACTGAATAACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
3UTR TCA 90 bp ACAGGTCACCATGCCAAAAACACTCCACGGACACCTGACAATGAGTaGGTTCACATTGTGGAAGCCCAGGGATTTCTGGTGAGGAGGAAG +
Preference number: 1 (lower is better)
Translates to: TGHHAKNTPRTPDNE*VHIVEAQGFLVRRK
Trigger: CTTCCTCCTCACCAGAAATCCCTGGGCTTCCACAATGTGAACTCACTCATTGTCAGGTGTCCGTGGAGTGTTTTTGGCATGGTGACCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
3UTR CCA 90 bp CCTCCCAGACTGCCTCTCAAGTTTTGCGGGGACAATAATGACAACTaGCATGACAATCTCAGCATCCTGGCTTATCAGTCTCCTCTCCGT +
Preference number: 1 (lower is better)
Translates to: PPRLPLKFCGDNNDN*HDNLSILAYQSPLR
Trigger: ACGGAGAGGAGACTGATAAGCCAGGATGCTGAGATTGTCATGCCAGTTGTCATTATTGTCCCCGCAAAACTTGAGAGGCAGTCTGGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495957.1
3UTR GCA 90 bp CACAGAGATATGCATACCATTGCGCATAAATACACATCTGCAACATaGTGGGCCCAGACAGGTCACCATGCCAAAAACACTCCACGGACA +
Preference number: 1 (lower is better)
Translates to: HRDMHTIAHKYTSAT*WAQTGHHAKNTPRT
Trigger: TGTCCGTGGAGTGTTTTTGGCATGGTGACCTGTCTGGGCCCAGCATGTTGCAGATGTGTATTTATGCGCAATGGTATGCATATCTCTGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
3UTR CCA 90 bp AGAGATATGCATACCATTGCGCATAAATACACATCTGCAACATGCTaGGCCCAGACAGGTCACCATGCCAAAAACACTCCACGGACACCT +
Preference number: 1 (lower is better)
Translates to: RDMHTIAHKYTSATC*AQTGHHAKNTPRTP
Trigger: AGGTGTCCGTGGAGTGTTTTTGGCATGGTGACCTGTCTGGGCCCAGCATGTTGCAGATGTGTATTTATGCGCAATGGTATGCATATCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
3UTR TCA 90 bp GTAACTGCCCACTGGGGAATAAAGGTCAGTTCCATCCTTCTGCAGTaGCCTCCCCCAGAATATCAACCCTTTGGATGCATTATTTCAGAA +
Preference number: 1 (lower is better)
Translates to: VTAHWGIKVSSILLQ*PPPEYQPFGCIISE
Trigger: TTCTGAAATAATGCATCCAAAGGGTTGATATTCTGGGGGAGGTCACTGCAGAAGGATGGAACTGACCTTTATTCCCCAGTGGGCAGTTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
3UTR CCA 90 bp GGCTCAGAAAGGTTGACTTGGGGTCTAAAAACTAGTACAGGCATCTaGTTTGAATTAAGACCTGTAAACGCTAGTACGGAGCAGAGAAGC +
Preference number: 1 (lower is better)
Translates to: GSERLTWGLKTSTGI*FELRPVNASTEQRS
Trigger: GCTTCTCTGCTCCGTACTAGCGTTTACAGGTCTTAATTCAAACCAGATGCCTGTACTAGTTTTTAGACCCCAAGTCAACCTTTCTGAGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
3UTR TCA 90 bp GCATTATTTCAGAAGAGATGGTTGGATCCAGCCAGCTTGCAACACTaGCAGTCACACAGAGATATGCATACCATTGCGCATAAATACACA +
Preference number: 1 (lower is better)
Translates to: ALFQKRWLDPASLQH*QSHRDMHTIAHKYT
Trigger: TGTGTATTTATGCGCAATGGTATGCATATCTCTGTGTGACTGTCAGTGTTGCAAGCTGGCTGGATCCAACCATCTCTTCTGAAATAATGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
3UTR-3UTR CCA 90 bp GCCCAGGGATTTCTGGTGAGGAGGAAGAGCCCTGGAGCTGCGGCATCTTGGGGGGAGGAGGAAGAGCCCTaGAGCTGCGGCATCTTGGGG +
Preference number: 2 (lower is better)
Translates to: AQGFLVRRKSPGAAASWGEEEEP*SCGILG
Trigger: CCCCAAGATGCCGCAGCTCCAGGGCTCTTCCTCCTC...CCCCCAAGATGCCGCAGCTCCAGGGCTCTTCCTCCTCACCAGAAATCCCTGGGC
64% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
3UTR-3UTR CCA 90 bp GTGCAGTCTTCAGGAGTCCGGGGCAAGATTCCATGCAGAGGCAGCCAAAGCCACGAGGAGGAAGAGCCCTaGAGCTGCGGCATCTTGGGG +
Preference number: 2 (lower is better)
Translates to: VQSSGVRGKIPCRGSQSHEEEEP*SCGILG
Trigger: CCCCAAGATGCCGCAGCTCCAGGGCTCTTCCTCCTC...GTGGCTTTGGCTGCCTCTGCATGGAATCTTGCCCCGGACTCCTGAAGACTGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
3UTR-3UTR CCA 90 bp GCAACATGCTGGGCCCAGACAGGTCACCATGCCAAAAACACTCCACGGACACCTGAGGAGGAAGAGCCCTaGAGCTGCGGCATCTTGGGG +
Preference number: 2 (lower is better)
Translates to: ATCWAQTGHHAKNTPRTPEEEEP*SCGILG
Trigger: CCCCAAGATGCCGCAGCTCCAGGGCTCTTCCTCCTC...AGGTGTCCGTGGAGTGTTTTTGGCATGGTGACCTGTCTGGGCCCAGCATGTTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
3UTR-3UTR TCA 90 bp AGCCCAGGGATTTCTGGTGAGGAGGAAGAGCCCTGGAGCTGCGGCATCTTGGGGAGAAACCAAGGTTCCTaGCCAGACTGCTTAGAGGAG +
Preference number: 2 (lower is better)
Translates to: SPGISGEEEEPWSCGILGRNQGS*PDCLEE
Trigger: CTCCTCTAAGCAGTCTGGTCAGGAACCTTGGTTTCT...CCCCAAGATGCCGCAGCTCCAGGGCTCTTCCTCCTCACCAGAAATCCCTGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
3UTR-3UTR CCA 90 bp AGCCCAGGGATTTCTGGTGAGGAGGAAGAGCCCTGGAGCTGCGGCATCTTGGGGCTTTTCCTGGCAATGTaGAGAAGCAGCAAGAGGGCA +
Preference number: 2 (lower is better)
Translates to: SPGISGEEEEPWSCGILGLFLAM*RSSKRA
Trigger: TGCCCTCTTGCTGCTTCTCCACATTGCCAGGAAAAG...CCCCAAGATGCCGCAGCTCCAGGGCTCTTCCTCCTCACCAGAAATCCCTGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
3UTR-3UTR GCA 90 bp TACACATCTGCAACATGCTGGGCCCAGACAGGTCACCATGCCAAAAACACTCCACCCAGGGTCACCAGGTaGACCGAGAGGTCTCAGCCT +
Preference number: 2 (lower is better)
Translates to: YTSATCWAQTGHHAKNTPPRVTR*TERSQP
Trigger: AGGCTGAGACCTCTCGGTGCACCTGGTGACCCTGGG...TGGAGTGTTTTTGGCATGGTGACCTGTCTGGGCCCAGCATGTTGCAGATGTGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000614574.4
3UTR-3UTR CCA 90 bp ATCTGCAACATGCTGGGCCCAGACAGGTCACCATGCCAAAAACACTCCACGGACGGAGCTGCGGCATCTTaGGGGCCTCTCAAGAAACCA +
Preference number: 2 (lower is better)
Translates to: ICNMLGPDRSPCQKHSTDGAAAS*GPLKKP
Trigger: TGGTTTCTTGAGAGGCCCCCAAGATGCCGCAGCTCC...GTCCGTGGAGTGTTTTTGGCATGGTGACCTGTCTGGGCCCAGCATGTTGCAGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
3UTR-3UTR TCA 90 bp TACACATCTGCAACATGCTGGGCCCAGACAGGTCACCATGCCAAAAACACTCCACCCAGGGATTTCTGGTaGGGAGGAAGAGCCCTGGAG +
Preference number: 2 (lower is better)
Translates to: YTSATCWAQTGHHAKNTPPRDFW*GGRALE
Trigger: CTCCAGGGCTCTTCCTCCTCACCAGAAATCCCTGGG...TGGAGTGTTTTTGGCATGGTGACCTGTCTGGGCCCAGCATGTTGCAGATGTGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
3UTR-3UTR CCA 90 bp GGCTCTGAGGAGGAAAGCTCAGTAACTGCCCACTGGGGAATAAAGGTCAGTTCCGGAGCTGCGGCATCTTaGGGGCCTCTCAAGAAACCA +
Preference number: 2 (lower is better)
Translates to: GSEEESSVTAHWGIKVSSGAAAS*GPLKKP
Trigger: TGGTTTCTTGAGAGGCCCCCAAGATGCCGCAGCTCC...GGAACTGACCTTTATTCCCCAGTGGGCAGTTACTGAGCTTTCCTCCTCAGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
3UTR-3UTR TCA 90 bp TTCCTCATTCCTTGTGCAGTCTTCAGGAGTCCGGGGCAAGATTCCATGCAGAGGCTGCCAGCATGGCTCTaGGGAGGAAAGCTCAGTAAC +
Preference number: 2 (lower is better)
Translates to: FLIPCAVFRSPGQDSMQRLPAWL*GGKLSN
Trigger: GTTACTGAGCTTTCCTCCTCAGAGCCATGCTGGCAG...CCTCTGCATGGAATCTTGCCCCGGACTCCTGAAGACTGCACAAGGAATGAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
3UTR-3UTR CCA 90 bp CAACATGCTGGGCCCAGACAGGTCACCATGCCAAAAACACTCCACGGACACCTGCTTTTCCTGGCAATGTaGAGAAGCAGCAAGAGGGCA +
Preference number: 2 (lower is better)
Translates to: QHAGPRQVTMPKTLHGHLLFLAM*RSSKRA
Trigger: TGCCCTCTTGCTGCTTCTCCACATTGCCAGGAAAAG...CAGGTGTCCGTGGAGTGTTTTTGGCATGGTGACCTGTCTGGGCCCAGCATGTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
3UTR-3UTR CCA 90 bp GCAACATGCTGGGCCCAGACAGGTCACCATGCCAAAAACACTCCACGGACACCTAGTGAGTTCACATTGTaGAAGCCCAGGGATTTCTGG +
Preference number: 2 (lower is better)
Translates to: ATCWAQTGHHAKNTPRTPSEFTL*KPRDFW
Trigger: CCAGAAATCCCTGGGCTTCCACAATGTGAACTCACT...AGGTGTCCGTGGAGTGTTTTTGGCATGGTGACCTGTCTGGGCCCAGCATGTTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
3UTR-3UTR GCA 90 bp TTCCTCATTCCTTGTGCAGTCTTCAGGAGTCCGGGGCAAGATTCCATGCAGAGGTGGATCCAGCCAGCTTaGAACACTGACAGTCACACA +
Preference number: 2 (lower is better)
Translates to: FLIPCAVFRSPGQDSMQRWIQPA*NTDSHT
Trigger: TGTGTGACTGTCAGTGTTGCAAGCTGGCTGGATCCA...CCTCTGCATGGAATCTTGCCCCGGACTCCTGAAGACTGCACAAGGAATGAGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
3UTR-3UTR CCA 90 bp CTGACCAGACTGCTTAGAGGAGAAAGATTCAGCCCTCGACTCAAGAGAGGAGGGGTCAGCAGCTTTTCCTaGCAATGTGGAGAAGCAGCA +
Preference number: 2 (lower is better)
Translates to: LTRLLRGERFSPRLKRGGVSSFS*QCGEAA
Trigger: TGCTGCTTCTCCACATTGCCAGGAAAAGCTGCTGAC...CCCTCCTCTCTTGAGTCGAGGGCTGAATCTTTCTCCTCTAAGCAGTCTGGTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
3UTR-3UTR TCA 90 bp TTCCTCATTCCTTGTGCAGTCTTCAGGAGTCCGGGGCAAGATTCCATGCAGAGGACACCTGACAATGAGTaGGTTCACATTGTGGAAGCC +
Preference number: 2 (lower is better)
Translates to: FLIPCAVFRSPGQDSMQRTPDNE*VHIVEA
Trigger: GGCTTCCACAATGTGAACTCACTCATTGTCAGGTGT...CCTCTGCATGGAATCTTGCCCCGGACTCCTGAAGACTGCACAAGGAATGAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
3UTR CAA 90 bp CAGCCAGCTTGCAACACTGACAGTCACACAGAGATATGCATACCATaGCGCATAAATACACATCTGCAACATGCTGGGCCCAGACAGGTC +
Preference number: 2 (lower is better)
Translates to: QPACNTDSHTEICIP*RINTHLQHAGPRQV
Trigger: GACCTGTCTGGGCCCAGCATGTTGCAGATGTGTATTTATGCGCAATGGTATGCATATCTCTGTGTGACTGTCAGTGTTGCAAGCTGGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
3UTR-3UTR TCA 90 bp TGCATACCATTGCGCATAAATACACATCTGCAACATGCTGGGCCCAGACAGGTCAGAAACCAAGGTTCCTaGCCAGACTGCTTAGAGGAG +
Preference number: 2 (lower is better)
Translates to: CIPLRINTHLQHAGPRQVRNQGS*PDCLEE
Trigger: CTCCTCTAAGCAGTCTGGTCAGGAACCTTGGTTTCT...GACCTGTCTGGGCCCAGCATGTTGCAGATGTGTATTTATGCGCAATGGTATGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
3UTR-3UTR TCA 90 bp TACACATCTGCAACATGCTGGGCCCAGACAGGTCACCATGCCAAAAACACTCCAACACCTGACAATGAGTaGGTTCACATTGTGGAAGCC +
Preference number: 2 (lower is better)
Translates to: YTSATCWAQTGHHAKNTPTPDNE*VHIVEA
Trigger: GGCTTCCACAATGTGAACTCACTCATTGTCAGGTGT...TGGAGTGTTTTTGGCATGGTGACCTGTCTGGGCCCAGCATGTTGCAGATGTGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
3UTR-3UTR CCA 90 bp GAGGAAAGCTCAGTAACTGCCCACTGGGGAATAAAGGTCAGTTCCATCCTTCTGCTTTTCCTGGCAATGTaGAGAAGCAGCAAGAGGGCA +
Preference number: 2 (lower is better)
Translates to: EESSVTAHWGIKVSSILLLFLAM*RSSKRA
Trigger: TGCCCTCTTGCTGCTTCTCCACATTGCCAGGAAAAG...CAGAAGGATGGAACTGACCTTTATTCCCCAGTGGGCAGTTACTGAGCTTTCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
3UTR-3UTR TCA 90 bp ATGCATACCATTGCGCATAAATACACATCTGCAACATGCTGGGCCCAGACAGGTAGAAACCAAGGTTCCTaGCCAGACTGCTTAGAGGAG +
Preference number: 2 (lower is better)
Translates to: MHTIAHKYTSATCWAQTGRNQGS*PDCLEE
Trigger: CTCCTCTAAGCAGTCTGGTCAGGAACCTTGGTTTCT...ACCTGTCTGGGCCCAGCATGTTGCAGATGTGTATTTATGCGCAATGGTATGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
3UTR-3UTR CCA 90 bp CCCAGAATATCAACCCTTTGGATGCATTATTTCAGAAGAGATGGTTGGATCCAGGGAGCTGCGGCATCTTaGGGGCCTCTCAAGAAACCA +
Preference number: 2 (lower is better)
Translates to: PRISTLWMHYFRRDGWIQGAAAS*GPLKKP
Trigger: TGGTTTCTTGAGAGGCCCCCAAGATGCCGCAGCTCC...CTGGATCCAACCATCTCTTCTGAAATAATGCATCCAAAGGGTTGATATTCTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
3UTR-3UTR CCA 90 bp ATATGCATACCATTGCGCATAAATACACATCTGCAACATGCTGGGCCCAGACAGACATCTGCAACATGCTaGGCCCAGACAGGTCACCAT +
Preference number: 2 (lower is better)
Translates to: ICIPLRINTHLQHAGPRQTSATC*AQTGHH
Trigger: ATGGTGACCTGTCTGGGCCCAGCATGTTGCAGATGT...CTGTCTGGGCCCAGCATGTTGCAGATGTGTATTTATGCGCAATGGTATGCATAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
3UTR-3UTR GCA 90 bp ACTAGTACAGGCATCTGGTTTGAATTAAGACCTGTAAACGCTAGTACGGAGCAGTACACATCTGCAACATaGTGGGCCCAGACAGGTCAC +
Preference number: 2 (lower is better)
Translates to: TSTGIWFELRPVNASTEQYTSAT*WAQTGH
Trigger: GTGACCTGTCTGGGCCCAGCATGTTGCAGATGTGTA...CTGCTCCGTACTAGCGTTTACAGGTCTTAATTCAAACCAGATGCCTGTACTAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
3UTR-3UTR CCA 90 bp CATAAATACACATCTGCAACATGCTGGGCCCAGACAGGTCACCATGCCAAAAACAGTGAGTTCACATTGTaGAAGCCCAGGGATTTCTGG +
Preference number: 2 (lower is better)
Translates to: HKYTSATCWAQTGHHAKNSEFTL*KPRDFW
Trigger: CCAGAAATCCCTGGGCTTCCACAATGTGAACTCACT...GTTTTTGGCATGGTGACCTGTCTGGGCCCAGCATGTTGCAGATGTGTATTTATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
3UTR-3UTR GCA 90 bp CCCAGAATATCAACCCTTTGGATGCATTATTTCAGAAGAGATGGTTGGATCCAGCCAGACAGGTCACCATaGCAAAAACACTCCACGGAC +
Preference number: 2 (lower is better)
Translates to: PRISTLWMHYFRRDGWIQPDRSP*QKHSTD
Trigger: GTCCGTGGAGTGTTTTTGGCATGGTGACCTGTCTGG...CTGGATCCAACCATCTCTTCTGAAATAATGCATCCAAAGGGTTGATATTCTGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
3UTR-3UTR GCA 90 bp TATCAACCCTTTGGATGCATTATTTCAGAAGAGATGGTTGGATCCAGCCAGCTTCCAGACAGGTCACCATaGCAAAAACACTCCACGGAC +
Preference number: 2 (lower is better)
Translates to: YQPFGCIISEEMVGSSQLPDRSP*QKHSTD
Trigger: GTCCGTGGAGTGTTTTTGGCATGGTGACCTGTCTGG...AAGCTGGCTGGATCCAACCATCTCTTCTGAAATAATGCATCCAAAGGGTTGATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
3UTR-3UTR TCA 90 bp TCCCCCAGAATATCAACCCTTTGGATGCATTATTTCAGAAGAGATGGTTGGATCAGAAACCAAGGTTCCTaGCCAGACTGCTTAGAGGAG +
Preference number: 2 (lower is better)
Translates to: SPRISTLWMHYFRRDGWIRNQGS*PDCLEE
Trigger: CTCCTCTAAGCAGTCTGGTCAGGAACCTTGGTTTCT...GATCCAACCATCTCTTCTGAAATAATGCATCCAAAGGGTTGATATTCTGGGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
3UTR-3UTR TCA 90 bp CCCCAGAATATCAACCCTTTGGATGCATTATTTCAGAAGAGATGGTTGGATCCATCCATCCTTCTGCAGTaGCCTCCCCCAGAATATCAA +
Preference number: 2 (lower is better)
Translates to: PQNINPLDALFQKRWLDPSILLQ*PPPEYQ
Trigger: TTGATATTCTGGGGGAGGTCACTGCAGAAGGATGGA...TGGATCCAACCATCTCTTCTGAAATAATGCATCCAAAGGGTTGATATTCTGGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
3UTR-3UTR TCA 90 bp TATCAACCCTTTGGATGCATTATTTCAGAAGAGATGGTTGGATCCAGCCAGCTTTCCATCCTTCTGCAGTaGCCTCCCCCAGAATATCAA +
Preference number: 2 (lower is better)
Translates to: YQPFGCIISEEMVGSSQLSILLQ*PPPEYQ
Trigger: TTGATATTCTGGGGGAGGTCACTGCAGAAGGATGGA...AAGCTGGCTGGATCCAACCATCTCTTCTGAAATAATGCATCCAAAGGGTTGATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
3UTR-3UTR GCA 90 bp AGTCACACAGAGATATGCATACCATTGCGCATAAATACACATCTGCAACATGCTCCAGACAGGTCACCATaGCAAAAACACTCCACGGAC +
Preference number: 2 (lower is better)
Translates to: SHTEICIPLRINTHLQHAPDRSP*QKHSTD
Trigger: GTCCGTGGAGTGTTTTTGGCATGGTGACCTGTCTGG...AGCATGTTGCAGATGTGTATTTATGCGCAATGGTATGCATATCTCTGTGTGACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
3UTR-3UTR CCA 90 bp CAGAATATCAACCCTTTGGATGCATTATTTCAGAAGAGATGGTTGGATCCAGCCGTCAGCAGCTTTTCCTaGCAATGTGGAGAAGCAGCA +
Preference number: 2 (lower is better)
Translates to: QNINPLDALFQKRWLDPAVSSFS*QCGEAA
Trigger: TGCTGCTTCTCCACATTGCCAGGAAAAGCTGCTGAC...GGCTGGATCCAACCATCTCTTCTGAAATAATGCATCCAAAGGGTTGATATTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
3UTR-3UTR GCA 90 bp CCCAGAATATCAACCCTTTGGATGCATTATTTCAGAAGAGATGGTTGGATCCAGAGTCACACAGAGATATaGATACCATTGCGCATAAAT +
Preference number: 2 (lower is better)
Translates to: PRISTLWMHYFRRDGWIQSHTEI*IPLRIN
Trigger: ATTTATGCGCAATGGTATGCATATCTCTGTGTGACT...CTGGATCCAACCATCTCTTCTGAAATAATGCATCCAAAGGGTTGATATTCTGGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
3UTR GCA 72 bp AGGCAGCCAAAGCCACACCGTTCTCTGTCCCAGGGCTaGCAGCATGGCTCTGAGGAGGAAAGCTCAGTAACT +
Preference number: 3 (lower is better)
Translates to: RQPKPHRSLSQG*QHGSEEESSVT
Trigger: AGTTACTGAGCTTTCCTCCTCAGAGCCATGCTGGCAGCCCTGGGACAGAGAACGGTGTGGCTTTGGCTGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
3UTR GCA 72 bp CTTGTGCAGTCTTCAGGAGTCCGGGGCAAGATTCCATaGAGAGGCAGCCAAAGCCACACCGTTCTCTGTCCC +
Preference number: 3 (lower is better)
Translates to: LVQSSGVRGKIP*RGSQSHTVLCP
Trigger: GGGACAGAGAACGGTGTGGCTTTGGCTGCCTCTGCATGGAATCTTGCCCCGGACTCCTGAAGACTGCACAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
3UTR GCA 72 bp AGTTCCCAGGTTGTCCCTGATCTTCCTCATTCCTTGTaGAGTCTTCAGGAGTCCGGGGCAAGATTCCATGCA +
Preference number: 3 (lower is better)
Translates to: SSQVVPDLPHSL*SLQESGARFHA
Trigger: TGCATGGAATCTTGCCCCGGACTCCTGAAGACTGCACAAGGAATGAGGAAGATCAGGGACAACCTGGGAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
3UTR TCA 72 bp CATGCCAAAAACACTCCACGGACACCTGACAATGAGTaGGTTCACATTGTGGAAGCCCAGGGATTTCTGGTG +
Preference number: 3 (lower is better)
Translates to: HAKNTPRTPDNE*VHIVEAQGFLV
Trigger: CACCAGAAATCCCTGGGCTTCCACAATGTGAACTCACTCATTGTCAGGTGTCCGTGGAGTGTTTTTGGCATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
3UTR CCA 72 bp CAACCCCACCCAGAACCCTGCCTCCTTATCTGTAAATaGGGTGTTTTAACTACTGTTTCTTCTAGCAGCCCC +
Preference number: 3 (lower is better)
Translates to: QPHPEPCLLICK*GVLTTVSSSSP
Trigger: GGGGCTGCTAGAAGAAACAGTAGTTAAAACACCCCATTTACAGATAAGGAGGCAGGGTTCTGGGTGGGGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495957.1
3UTR CCA 72 bp CATACCATTGCGCATAAATACACATCTGCAACATGCTaGGCCCAGACAGGTCACCATGCCAAAAACACTCCA +
Preference number: 3 (lower is better)
Translates to: HTIAHKYTSATC*AQTGHHAKNTP
Trigger: TGGAGTGTTTTTGGCATGGTGACCTGTCTGGGCCCAGCATGTTGCAGATGTGTATTTATGCGCAATGGTATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
3UTR-3UTR CAA 90 bp TCAACCCTTTGGATGCATTATTTCAGAAGAGATGGTTGGATCCAGCCAGCTTGCATGAGTGAGTTCACATaGTGGAAGCCCAGGGATTTC +
Preference number: 3 (lower is better)
Translates to: STLWMHYFRRDGWIQPACMSEFT*WKPRDF
Trigger: GAAATCCCTGGGCTTCCACAATGTGAACTCACTCAT...GCAAGCTGGCTGGATCCAACCATCTCTTCTGAAATAATGCATCCAAAGGGTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
3UTR GCA 72 bp ATGCATACCATTGCGCATAAATACACATCTGCAACATaGTGGGCCCAGACAGGTCACCATGCCAAAAACACT +
Preference number: 3 (lower is better)
Translates to: MHTIAHKYTSAT*WAQTGHHAKNT
Trigger: AGTGTTTTTGGCATGGTGACCTGTCTGGGCCCAGCATGTTGCAGATGTGTATTTATGCGCAATGGTATGCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
3UTR CCA 72 bp CTGCCTCTCAAGTTTTGCGGGGACAATAATGACAACTaGCATGACAATCTCAGCATCCTGGCTTATCAGTCT +
Preference number: 3 (lower is better)
Translates to: LPLKFCGDNNDN*HDNLSILAYQS
Trigger: AGACTGATAAGCCAGGATGCTGAGATTGTCATGCCAGTTGTCATTATTGTCCCCGCAAAACTTGAGAGGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495957.1
3UTR-3UTR CAA 90 bp ATCAACCCTTTGGATGCATTATTTCAGAAGAGATGGTTGGATCCAGCCAGCTTGATGAGTGAGTTCACATaGTGGAAGCCCAGGGATTTC +
Preference number: 3 (lower is better)
Translates to: INPLDALFQKRWLDPASLMSEFT*WKPRDF
Trigger: GAAATCCCTGGGCTTCCACAATGTGAACTCACTCAT...CAAGCTGGCTGGATCCAACCATCTCTTCTGAAATAATGCATCCAAAGGGTTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
3UTR-3UTR CAA 90 bp CCCCCAGAATATCAACCCTTTGGATGCATTATTTCAGAAGAGATGGTTGGATCCATGAGTGAGTTCACATaGTGGAAGCCCAGGGATTTC +
Preference number: 3 (lower is better)
Translates to: PPEYQPFGCIISEEMVGSMSEFT*WKPRDF
Trigger: GAAATCCCTGGGCTTCCACAATGTGAACTCACTCAT...GGATCCAACCATCTCTTCTGAAATAATGCATCCAAAGGGTTGATATTCTGGGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
3UTR TCA 72 bp TTAAGACCTGTAAACGCTAGTACGGAGCAGAGAAGCTaGGCACTGGCTTTGAAAGTTATTCAGTTCCCAGGT +
Preference number: 3 (lower is better)
Translates to: LRPVNASTEQRS*ALALKVIQFPG
Trigger: ACCTGGGAACTGAATAACTTTCAAAGCCAGTGCTCAGCTTCTCTGCTCCGTACTAGCGTTTACAGGTCTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
3UTR-3UTR CAA 90 bp CCCCAGAATATCAACCCTTTGGATGCATTATTTCAGAAGAGATGGTTGGATCCAATGAGTGAGTTCACATaGTGGAAGCCCAGGGATTTC +
Preference number: 3 (lower is better)
Translates to: PQNINPLDALFQKRWLDPMSEFT*WKPRDF
Trigger: GAAATCCCTGGGCTTCCACAATGTGAACTCACTCAT...TGGATCCAACCATCTCTTCTGAAATAATGCATCCAAAGGGTTGATATTCTGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
3UTR-3UTR CAA 90 bp ATATGCATACCATTGCGCATAAATACACATCTGCAACATGCTGGGCCCAGACAGGAGATATGCATACCATaGCGCATAAATACACATCTG +
Preference number: 3 (lower is better)
Translates to: ICIPLRINTHLQHAGPRQEICIP*RINTHL
Trigger: CAGATGTGTATTTATGCGCAATGGTATGCATATCTC...CTGTCTGGGCCCAGCATGTTGCAGATGTGTATTTATGCGCAATGGTATGCATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
3UTR CCA 72 bp AGGTTGACTTGGGGTCTAAAAACTAGTACAGGCATCTaGTTTGAATTAAGACCTGTAAACGCTAGTACGGAG +
Preference number: 3 (lower is better)
Translates to: RLTWGLKTSTGI*FELRPVNASTE
Trigger: CTCCGTACTAGCGTTTACAGGTCTTAATTCAAACCAGATGCCTGTACTAGTTTTTAGACCCCAAGTCAACCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR CCA 90 bp GCAGAGGGCGAGGAAGACTTCACAGCAAGTCCCCTCCACCCAGGGTCACCAGGTCCCCCAGCTTCTGGCTaGCCAGGAGTCGGCCTACCT +
Preference number: 4 (lower is better)
Translates to: AEGEEDFTASPLHPGSPGPPASG*PGVGLP
Trigger: AGGTAGGCCGACTCCTGGCCAGCCAGAAGCTGGGGG...ACCTGGTGACCCTGGGTGGAGGGGACTTGCTGTGAAGTCTTCCTCGCCCTCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
CDS-3UTR CCA 90 bp AGCCCAGGGATTTCTGGTGAGGAGGAAGAGCCCTGGAGCTGCGGCATCTTGGGGACCTCCCCCAGCTTCTaGCTGGCCAGGAGTCGGCCT +
Preference number: 4 (lower is better)
Translates to: SPGISGEEEEPWSCGILGTSPSF*LARSRP
Trigger: AGGCCGACTCCTGGCCAGCCAGAAGCTGGGGGAGGT...CCCCAAGATGCCGCAGCTCCAGGGCTCTTCCTCCTCACCAGAAATCCCTGGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR TCA 90 bp GGCAGAGGGCGAGGAAGACTTCACAGCAAGTCCCCTCCACCCAGGGTCACCAGGAAGTCCAGGGAGTCCTaGGAAAGGCCCGGTAAGGCG +
Preference number: 4 (lower is better)
Translates to: GRGRGRLHSKSPPPRVTRKSRES*ERPGKA
Trigger: CGCCTTACCGGGCCTTTCTCAGGACTCCCTGGACTT...CCTGGTGACCCTGGGTGGAGGGGACTTGCTGTGAAGTCTTCCTCGCCCTCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
CDS-3UTR GCA 90 bp GGCAGAGGGCGAGGAAGACTTCACAGCAAGTCCCCTCCACCCAGGGTCACCAGGGGACTCCTGTTGCCCTaGTCCAAGGGGCACTTCACG +
Preference number: 4 (lower is better)
Translates to: GRGRGRLHSKSPPPRVTRGLLLP*SKGHFT
Trigger: CGTGAAGTGCCCCTTGGAGCAGGGCAACAGGAGTCC...CCTGGTGACCCTGGGTGGAGGGGACTTGCTGTGAAGTCTTCCTCGCCCTCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
CDS-3UTR GCA 90 bp GGCAGAGGGCGAGGAAGACTTCACAGCAAGTCCCCTCCACCCAGGGTCACCAGGGAGCTGCTGGAGCCTTaGCATCTGCTCCAGCACCAG +
Preference number: 4 (lower is better)
Translates to: GRGRGRLHSKSPPPRVTRELLEP*HLLQHQ
Trigger: CTGGTGCTGGAGCAGATGGCAAGGCTCCAGCAGCTC...CCTGGTGACCCTGGGTGGAGGGGACTTGCTGTGAAGTCTTCCTCGCCCTCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
CDS-3UTR GCA 90 bp GCAGAGGGCGAGGAAGACTTCACAGCAAGTCCCCTCCACCCAGGGTCACCAGGTCCCAGGGTCACCAGGTaGACCGAGAGGTCTCAGCCT +
Preference number: 4 (lower is better)
Translates to: AEGEEDFTASPLHPGSPGPRVTR*TERSQP
Trigger: AGGCTGAGACCTCTCGGTGCACCTGGTGACCCTGGG...ACCTGGTGACCCTGGGTGGAGGGGACTTGCTGTGAAGTCTTCCTCGCCCTCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
CDS-3UTR CCA 90 bp GGCAGAGGGCGAGGAAGACTTCACAGCAAGTCCCCTCCACCCAGGGTCACCAGGGTACGTTGGCTCCACTaGGGTTTCTGGCAGCCTGGG +
Preference number: 4 (lower is better)
Translates to: GRGRGRLHSKSPPPRVTRVRWLH*GFWQPG
Trigger: CCCAGGCTGCCAGAAACCCCAGTGGAGCCAACGTAC...CCTGGTGACCCTGGGTGGAGGGGACTTGCTGTGAAGTCTTCCTCGCCCTCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
CDS-3UTR CCA 90 bp GAAGCCCAGGGATTTCTGGTGAGGAGGAAGAGCCCTGGAGCTGCGGCATCTTGGGGGGGCTCAGGGTGGTaGTGGCTTCTCCGGCAGATC +
Preference number: 4 (lower is better)
Translates to: EAQGFLVRRKSPGAAASWGGSGW*WLLRQI
Trigger: GATCTGCCGGAGAAGCCACCACCACCCTGAGCCCCC...CCAAGATGCCGCAGCTCCAGGGCTCTTCCTCCTCACCAGAAATCCCTGGGCTTC
63% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000615223.2
CDS-3UTR CCA 90 bp GTGCAGTCTTCAGGAGTCCGGGGCAAGATTCCATGCAGAGGCAGCCAAAGCCACGCAGGGGGCTCAGGGTaGTGGTGGCTTCTCCGGCAG +
Preference number: 4 (lower is better)
Translates to: VQSSGVRGKIPCRGSQSHAGGSG*WWLLRQ
Trigger: CTGCCGGAGAAGCCACCACCACCCTGAGCCCCCTGC...GTGGCTTTGGCTGCCTCTGCATGGAATCTTGCCCCGGACTCCTGAAGACTGCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000615223.2
CDS-3UTR TCA 90 bp GCCCAGGGATTTCTGGTGAGGAGGAAGAGCCCTGGAGCTGCGGCATCTTGGGGGGTCTGTAGGTGCTGGTaGCTCCAGGCACTATGCAGC +
Preference number: 4 (lower is better)
Translates to: AQGFLVRRKSPGAAASWGVCRCW*LQALCS
Trigger: GCTGCATAGTGCCTGGAGTCACCAGCACCTACAGAC...CCCCCAAGATGCCGCAGCTCCAGGGCTCTTCCTCCTCACCAGAAATCCCTGGGC
62% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
CDS-3UTR TCA 90 bp GACTGCTTAGAGGAGAAAGATTCAGCCCTCGACTCAAGAGAGGAGGGCAGGCGTCGGTGGGGGCGGCACTaGGGCCTTTCAGGGAGGTCC +
Preference number: 4 (lower is better)
Translates to: DCLEEKDSALDSREEGRRRWGRH*GLSGRS
Trigger: GGACCTCCCTGAAAGGCCTCAGTGCCGCCCCCACCG...ACGCCTGCCCTCCTCTCTTGAGTCGAGGGCTGAATCTTTCTCCTCTAAGCAGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
CDS-3UTR CCA 90 bp GACTGCTTAGAGGAGAAAGATTCAGCCCTCGACTCAAGAGAGGAGGGCAGGCGTCTCGCCGGGATCCCCTaGGGGCCTCTGGATCCGCAG +
Preference number: 4 (lower is better)
Translates to: DCLEEKDSALDSREEGRRLAGIP*GPLDPQ
Trigger: CTGCGGATCCAGAGGCCCCCAGGGGATCCCGGCGAG...ACGCCTGCCCTCCTCTCTTGAGTCGAGGGCTGAATCTTTCTCCTCTAAGCAGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
CDS-3UTR CCA 90 bp AGCCCAGGGATTTCTGGTGAGGAGGAAGAGCCCTGGAGCTGCGGCATCTTGGGGGTACGTTGGCTCCACTaGGGTTTCTGGCAGCCTGGG +
Preference number: 4 (lower is better)
Translates to: SPGISGEEEEPWSCGILGVRWLH*GFWQPG
Trigger: CCCAGGCTGCCAGAAACCCCAGTGGAGCCAACGTAC...CCCCAAGATGCCGCAGCTCCAGGGCTCTTCCTCCTCACCAGAAATCCCTGGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR CCA 90 bp GCCCAGGGATTTCTGGTGAGGAGGAAGAGCCCTGGAGCTGCGGCATCTTGGGGGGTGTCCCTGGGAGGATaGCAAGTGGTACGTTGGCTC +
Preference number: 4 (lower is better)
Translates to: AQGFLVRRKSPGAAASWGVSLGG*QVVRWL
Trigger: GAGCCAACGTACCACTTGCCATCCTCCCAGGGACAC...CCCCCAAGATGCCGCAGCTCCAGGGCTCTTCCTCCTCACCAGAAATCCCTGGGC
62% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR CCA 90 bp GTGCAGTCTTCAGGAGTCCGGGGCAAGATTCCATGCAGAGGCAGCCAAAGCCACGGCTCAGGGTGGTGGTaGCTTCTCCGGCAGATCCGG +
Preference number: 4 (lower is better)
Translates to: VQSSGVRGKIPCRGSQSHGSGWW*LLRQIR
Trigger: CCGGATCTGCCGGAGAAGCCACCACCACCCTGAGCC...GTGGCTTTGGCTGCCTCTGCATGGAATCTTGCCCCGGACTCCTGAAGACTGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000615223.2
CDS-3UTR CCA 90 bp GCAGAGGGCGAGGAAGACTTCACAGCAAGTCCCCTCCACCCAGGGTCACCAGGTCCCTGGACTCGATCCTaGGGTCAGAGCCATCAGGAG +
Preference number: 4 (lower is better)
Translates to: AEGEEDFTASPLHPGSPGPWTRS*GQSHQE
Trigger: CTCCTGATGGCTCTGACCCCAGGATCGAGTCCAGGG...ACCTGGTGACCCTGGGTGGAGGGGACTTGCTGTGAAGTCTTCCTCGCCCTCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289989.10
ENST00000409586.7
CDS-3UTR TCA 90 bp CCCCTCCACCCAGGGTCACCAGGTGCACCGAGAGGTCTCAGCCTACAGAAAGGTGTCTGTAGGTGCTGGTaGCTCCAGGCACTATGCAGC +
Preference number: 4 (lower is better)
Translates to: PLHPGSPGAPRGLSLQKGVCRCW*LQALCS
Trigger: GCTGCATAGTGCCTGGAGTCACCAGCACCTACAGAC...ACCTTTCTGTAGGCTGAGACCTCTCGGTGCACCTGGTGACCCTGGGTGGAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614574.4
CDS-3UTR TCA 90 bp CTGACCAGACTGCTTAGAGGAGAAAGATTCAGCCCTCGACTCAAGAGAGGAGGGCGGTGGGGGCGGCACTaGGGCCTTTCAGGGAGGTCC +
Preference number: 4 (lower is better)
Translates to: LTRLLRGERFSPRLKRGGRWGRH*GLSGRS
Trigger: GGACCTCCCTGAAAGGCCTCAGTGCCGCCCCCACCG...CCCTCCTCTCTTGAGTCGAGGGCTGAATCTTTCTCCTCTAAGCAGTCTGGTCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR CCA 90 bp GGCTCTGAGGAGGAAAGCTCAGTAACTGCCCACTGGGGAATAAAGGTCAGTTCCGCTGGTGGGAGCTGTTaGGAGCCGGCGGGACCGCTC +
Preference number: 4 (lower is better)
Translates to: GSEEESSVTAHWGIKVSSAGGSC*EPAGPL
Trigger: GAGCGGTCCCGCCGGCTCCCAACAGCTCCCACCAGC...GGAACTGACCTTTATTCCCCAGTGGGCAGTTACTGAGCTTTCCTCCTCAGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR CCA 90 bp GTGCAGTCTTCAGGAGTCCGGGGCAAGATTCCATGCAGAGGCAGCCAAAGCCACGTCCTGACAAGCTGGTaGGAGCTGTTGGGAGCCGGC +
Preference number: 4 (lower is better)
Translates to: VQSSGVRGKIPCRGSQSHVLTSW*ELLGAG
Trigger: GCCGGCTCCCAACAGCTCCCACCAGCTTGTCAGGAC...GTGGCTTTGGCTGCCTCTGCATGGAATCTTGCCCCGGACTCCTGAAGACTGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR CCA 90 bp GCAGAGGGCGAGGAAGACTTCACAGCAAGTCCCCTCCACCCAGGGTCACCAGGTGTGTCCCTGGGAGGATaGCAAGTGGTACGTTGGCTC +
Preference number: 4 (lower is better)
Translates to: AEGEEDFTASPLHPGSPGVSLGG*QVVRWL
Trigger: GAGCCAACGTACCACTTGCCATCCTCCCAGGGACAC...ACCTGGTGACCCTGGGTGGAGGGGACTTGCTGTGAAGTCTTCCTCGCCCTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
CDS-3UTR CCA 90 bp GCCCAGGGATTTCTGGTGAGGAGGAAGAGCCCTGGAGCTGCGGCATCTTGGGGGCCCAGCGGGAAGCTGTaGCTCAGAAAGGTTGACTTG +
Preference number: 4 (lower is better)
Translates to: AQGFLVRRKSPGAAASWGPSGKL*LRKVDL
Trigger: CAAGTCAACCTTTCTGAGCCACAGCTTCCCGCTGGG...CCCCCAAGATGCCGCAGCTCCAGGGCTCTTCCTCCTCACCAGAAATCCCTGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR TCA 90 bp CACATCTGCAACATGCTGGGCCCAGACAGGTCACCATGCCAAAAACACTCCACGACCTCTCTCCCAGGATaGGCACCCGTGGGCAGCGTC +
Preference number: 4 (lower is better)
Translates to: HICNMLGPDRSPCQKHSTTSLPG*APVGSV
Trigger: GACGCTGCCCACGGGTGCTCATCCTGGGAGAGAGGT...CGTGGAGTGTTTTTGGCATGGTGACCTGTCTGGGCCCAGCATGTTGCAGATGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR TCA 90 bp GTGCAGTCTTCAGGAGTCCGGGGCAAGATTCCATGCAGAGGCAGCCAAAGCCACCCCAGGGATTTCTGGTaGGGAGGAAGAGCCCTGGAG +
Preference number: 4 (lower is better)
Translates to: VQSSGVRGKIPCRGSQSHPRDFW*GGRALE
Trigger: CTCCAGGGCTCTTCCTCCTCACCAGAAATCCCTGGG...GTGGCTTTGGCTGCCTCTGCATGGAATCTTGCCCCGGACTCCTGAAGACTGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR GCA 90 bp GCCCAGGGATTTCTGGTGAGGAGGAAGAGCCCTGGAGCTGCGGCATCTTGGGGGTACACATCTGCAACATaGTGGGCCCAGACAGGTCAC +
Preference number: 4 (lower is better)
Translates to: AQGFLVRRKSPGAAASWGYTSAT*WAQTGH
Trigger: GTGACCTGTCTGGGCCCAGCATGTTGCAGATGTGTA...CCCCCAAGATGCCGCAGCTCCAGGGCTCTTCCTCCTCACCAGAAATCCCTGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR CCA 90 bp CACATCTGCAACATGCTGGGCCCAGACAGGTCACCATGCCAAAAACACTCCACGCAGGATGAGCACCCGTaGGCAGCGTCGGGGATCCGT +
Preference number: 4 (lower is better)
Translates to: HICNMLGPDRSPCQKHSTQDEHP*AASGIR
Trigger: ACGGATCCCCGACGCTGCCCACGGGTGCTCATCCTG...CGTGGAGTGTTTTTGGCATGGTGACCTGTCTGGGCCCAGCATGTTGCAGATGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR CCA 90 bp TGCTGGGCCCAGACAGGTCACCATGCCAAAAACACTCCACGGACACCTGACAATACCTCCCCCAGCTTCTaGCTGGCCAGGAGTCGGCCT +
Preference number: 4 (lower is better)
Translates to: CWAQTGHHAKNTPRTPDNTSPSF*LARSRP
Trigger: AGGCCGACTCCTGGCCAGCCAGAAGCTGGGGGAGGT...ATTGTCAGGTGTCCGTGGAGTGTTTTTGGCATGGTGACCTGTCTGGGCCCAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR CCA 90 bp GCAACATGCTGGGCCCAGACAGGTCACCATGCCAAAAACACTCCACGGACACCTTGGGAGGGTTGGCACTaGGCACCTCCACCTTTGGGG +
Preference number: 4 (lower is better)
Translates to: ATCWAQTGHHAKNTPRTPWEGWH*APPPLG
Trigger: CCCCAAAGGTGGAGGTGCCCAGTGCCAACCCTCCCA...AGGTGTCCGTGGAGTGTTTTTGGCATGGTGACCTGTCTGGGCCCAGCATGTTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR CCA 90 bp ATCTGCAACATGCTGGGCCCAGACAGGTCACCATGCCAAAAACACTCCACGGACGCAGCCTGGGAGGGTTaGCACTGGGCACCTCCACCT +
Preference number: 4 (lower is better)
Translates to: ICNMLGPDRSPCQKHSTDAAWEG*HWAPPP
Trigger: AGGTGGAGGTGCCCAGTGCCAACCCTCCCAGGCTGC...GTCCGTGGAGTGTTTTTGGCATGGTGACCTGTCTGGGCCCAGCATGTTGCAGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR CCA 90 bp ATCTGCAACATGCTGGGCCCAGACAGGTCACCATGCCAAAAACACTCCACGGACGGCTCAGGGTGGTGGTaGCTTCTCCGGCAGATCCGG +
Preference number: 4 (lower is better)
Translates to: ICNMLGPDRSPCQKHSTDGSGWW*LLRQIR
Trigger: CCGGATCTGCCGGAGAAGCCACCACCACCCTGAGCC...GTCCGTGGAGTGTTTTTGGCATGGTGACCTGTCTGGGCCCAGCATGTTGCAGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000615223.2
CDS-3UTR CCA 90 bp CACATCTGCAACATGCTGGGCCCAGACAGGTCACCATGCCAAAAACACTCCACGGGCTCAGGGTGGTGGTaGCTTCTCCGGCAGATCCGG +
Preference number: 4 (lower is better)
Translates to: HICNMLGPDRSPCQKHSTGSGWW*LLRQIR
Trigger: CCGGATCTGCCGGAGAAGCCACCACCACCCTGAGCC...CGTGGAGTGTTTTTGGCATGGTGACCTGTCTGGGCCCAGCATGTTGCAGATGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000615223.2
CDS-3UTR CCA 90 bp GACTGCTTAGAGGAGAAAGATTCAGCCCTCGACTCAAGAGAGGAGGGCAGGCGTGGGGGCTCAGGGTGGTaGTGGCTTCTCCGGCAGATC +
Preference number: 4 (lower is better)
Translates to: DCLEEKDSALDSREEGRRGGSGW*WLLRQI
Trigger: GATCTGCCGGAGAAGCCACCACCACCCTGAGCCCCC...ACGCCTGCCCTCCTCTCTTGAGTCGAGGGCTGAATCTTTCTCCTCTAAGCAGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289989.10
ENST00000409586.7
CDS-3UTR CCA 90 bp GCCCAGGGATTTCTGGTGAGGAGGAAGAGCCCTGGAGCTGCGGCATCTTGGGGGACATCTGCAACATGCTaGGCCCAGACAGGTCACCAT +
Preference number: 4 (lower is better)
Translates to: AQGFLVRRKSPGAAASWGTSATC*AQTGHH
Trigger: ATGGTGACCTGTCTGGGCCCAGCATGTTGCAGATGT...CCCCCAAGATGCCGCAGCTCCAGGGCTCTTCCTCCTCACCAGAAATCCCTGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
3UTR CAA 72 bp TCTGGTGAGGAGGAAGAGCCCTGGAGCTGCGGCATCTaGGGGGCCTCTCAAGAAACCAAGGTTCCTGACCAG +
Preference number: 4 (lower is better)
Translates to: SGEEEEPWSCGI*GASQETKVPDQ
Trigger: CTGGTCAGGAACCTTGGTTTCTTGAGAGGCCCCCAAGATGCCGCAGCTCCAGGGCTCTTCCTCCTCACCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR TCA 90 bp GCAACATGCTGGGCCCAGACAGGTCACCATGCCAAAAACACTCCACGGACACCTCCCTGCCGACACCTCTaGACTTGTCACCTCTCTCCC +
Preference number: 4 (lower is better)
Translates to: ATCWAQTGHHAKNTPRTPPCRHL*TCHLSP
Trigger: GGGAGAGAGGTGACAAGTTCAGAGGTGTCGGCAGGG...AGGTGTCCGTGGAGTGTTTTTGGCATGGTGACCTGTCTGGGCCCAGCATGTTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR TCA 90 bp GCCCAGGGATTTCTGGTGAGGAGGAAGAGCCCTGGAGCTGCGGCATCTTGGGGGTTCCCAGGTTGTCCCTaGTCTTCCTCATTCCTTGTG +
Preference number: 4 (lower is better)
Translates to: AQGFLVRRKSPGAAASWGFPGCP*SSSFLV
Trigger: CACAAGGAATGAGGAAGATCAGGGACAACCTGGGAA...CCCCCAAGATGCCGCAGCTCCAGGGCTCTTCCTCCTCACCAGAAATCCCTGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR GCA 90 bp GCAACATGCTGGGCCCAGACAGGTCACCATGCCAAAAACACTCCACGGACACCTGGACTCCTGTTGCCCTaGTCCAAGGGGCACTTCACG +
Preference number: 4 (lower is better)
Translates to: ATCWAQTGHHAKNTPRTPGLLLP*SKGHFT
Trigger: CGTGAAGTGCCCCTTGGAGCAGGGCAACAGGAGTCC...AGGTGTCCGTGGAGTGTTTTTGGCATGGTGACCTGTCTGGGCCCAGCATGTTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR GCA 90 bp CAACATGCTGGGCCCAGACAGGTCACCATGCCAAAAACACTCCACGGACACCTGGGACTCCTGTTGCCCTaGTCCAAGGGGCACTTCACG +
Preference number: 4 (lower is better)
Translates to: QHAGPRQVTMPKTLHGHLGLLLP*SKGHFT
Trigger: CGTGAAGTGCCCCTTGGAGCAGGGCAACAGGAGTCC...CAGGTGTCCGTGGAGTGTTTTTGGCATGGTGACCTGTCTGGGCCCAGCATGTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR GCA 90 bp GCAACATGCTGGGCCCAGACAGGTCACCATGCCAAAAACACTCCACGGACACCTTGGAGCCTTGCCATCTaGTCCAGCACCAGGCACAGG +
Preference number: 4 (lower is better)
Translates to: ATCWAQTGHHAKNTPRTPWSLAI*SSTRHR
Trigger: CCTGTGCCTGGTGCTGGAGCAGATGGCAAGGCTCCA...AGGTGTCCGTGGAGTGTTTTTGGCATGGTGACCTGTCTGGGCCCAGCATGTTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR GCA 90 bp GCAGAGGGCGAGGAAGACTTCACAGCAAGTCCCCTCCACCCAGGGTCACCAGGTCTTCCTCATTCCTTGTaGAGTCTTCAGGAGTCCGGG +
Preference number: 4 (lower is better)
Translates to: AEGEEDFTASPLHPGSPGLPHSL*SLQESG
Trigger: CCCGGACTCCTGAAGACTGCACAAGGAATGAGGAAG...ACCTGGTGACCCTGGGTGGAGGGGACTTGCTGTGAAGTCTTCCTCGCCCTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
CDS-3UTR CCA 90 bp GAGGAAAGCTCAGTAACTGCCCACTGGGGAATAAAGGTCAGTTCCATCCTTCTGCTCGCCGGGATCCCCTaGGGGCCTCTGGATCCGCAG +
Preference number: 4 (lower is better)
Translates to: EESSVTAHWGIKVSSILLLAGIP*GPLDPQ
Trigger: CTGCGGATCCAGAGGCCCCCAGGGGATCCCGGCGAG...CAGAAGGATGGAACTGACCTTTATTCCCCAGTGGGCAGTTACTGAGCTTTCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR CCA 90 bp ATCTGCAACATGCTGGGCCCAGACAGGTCACCATGCCAAAAACACTCCACGGACTGGGAGGGTTGGCACTaGGCACCTCCACCTTTGGGG +
Preference number: 4 (lower is better)
Translates to: ICNMLGPDRSPCQKHSTDWEGWH*APPPLG
Trigger: CCCCAAAGGTGGAGGTGCCCAGTGCCAACCCTCCCA...GTCCGTGGAGTGTTTTTGGCATGGTGACCTGTCTGGGCCCAGCATGTTGCAGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR CCA 90 bp GCAACATGCTGGGCCCAGACAGGTCACCATGCCAAAAACACTCCACGGACACCTCCCTGGACTCGATCCTaGGGTCAGAGCCATCAGGAG +
Preference number: 4 (lower is better)
Translates to: ATCWAQTGHHAKNTPRTPPWTRS*GQSHQE
Trigger: CTCCTGATGGCTCTGACCCCAGGATCGAGTCCAGGG...AGGTGTCCGTGGAGTGTTTTTGGCATGGTGACCTGTCTGGGCCCAGCATGTTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000615223.2
CDS-3UTR CCA 90 bp TGCTGGGCCCAGACAGGTCACCATGCCAAAAACACTCCACGGACACCTGACAATGAGGAGGAAGAGCCCTaGAGCTGCGGCATCTTGGGG +
Preference number: 4 (lower is better)
Translates to: CWAQTGHHAKNTPRTPDNEEEEP*SCGILG
Trigger: CCCCAAGATGCCGCAGCTCCAGGGCTCTTCCTCCTC...ATTGTCAGGTGTCCGTGGAGTGTTTTTGGCATGGTGACCTGTCTGGGCCCAGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR TCA 90 bp TGCTGGGCCCAGACAGGTCACCATGCCAAAAACACTCCACGGACACCTGACAATCCCTGCCGACACCTCTaGACTTGTCACCTCTCTCCC +
Preference number: 4 (lower is better)
Translates to: CWAQTGHHAKNTPRTPDNPCRHL*TCHLSP
Trigger: GGGAGAGAGGTGACAAGTTCAGAGGTGTCGGCAGGG...ATTGTCAGGTGTCCGTGGAGTGTTTTTGGCATGGTGACCTGTCTGGGCCCAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR TCA 90 bp GACTGCTTAGAGGAGAAAGATTCAGCCCTCGACTCAAGAGAGGAGGGCAGGCGTTGCCATCTCCACTCCTaGGTCCCGGGAGGCCAGTTT +
Preference number: 4 (lower is better)
Translates to: DCLEEKDSALDSREEGRRCHLHS*VPGGQF
Trigger: AAACTGGCCTCCCGGGACTCAGGAGTGGAGATGGCA...ACGCCTGCCCTCCTCTCTTGAGTCGAGGGCTGAATCTTTCTCCTCTAAGCAGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
CDS-3UTR TCA 90 bp TGCTGGGCCCAGACAGGTCACCATGCCAAAAACACTCCACGGACACCTGACAATCCCAGGGATTTCTGGTaGGGAGGAAGAGCCCTGGAG +
Preference number: 4 (lower is better)
Translates to: CWAQTGHHAKNTPRTPDNPRDFW*GGRALE
Trigger: CTCCAGGGCTCTTCCTCCTCACCAGAAATCCCTGGG...ATTGTCAGGTGTCCGTGGAGTGTTTTTGGCATGGTGACCTGTCTGGGCCCAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR TCA 90 bp GTGCAGTCTTCAGGAGTCCGGGGCAAGATTCCATGCAGAGGCAGCCAAAGCCACCTGCCAGCATGGCTCTaGGGAGGAAAGCTCAGTAAC +
Preference number: 4 (lower is better)
Translates to: VQSSGVRGKIPCRGSQSHLPAWL*GGKLSN
Trigger: GTTACTGAGCTTTCCTCCTCAGAGCCATGCTGGCAG...GTGGCTTTGGCTGCCTCTGCATGGAATCTTGCCCCGGACTCCTGAAGACTGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR TCA 90 bp AGCCCAGGGATTTCTGGTGAGGAGGAAGAGCCCTGGAGCTGCGGCATCTTGGGGTTCCCAGGTTGTCCCTaGTCTTCCTCATTCCTTGTG +
Preference number: 4 (lower is better)
Translates to: SPGISGEEEEPWSCGILGFPGCP*SSSFLV
Trigger: CACAAGGAATGAGGAAGATCAGGGACAACCTGGGAA...CCCCAAGATGCCGCAGCTCCAGGGCTCTTCCTCCTCACCAGAAATCCCTGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR GCA 90 bp TGCAACATGCTGGGCCCAGACAGGTCACCATGCCAAAAACACTCCACGGACACCTCCATGGACTCCTGTTaGCCTGCTCCAAGGGGCACT +
Preference number: 4 (lower is better)
Translates to: CNMLGPDRSPCQKHSTDTSMDSC*PAPRGT
Trigger: AGTGCCCCTTGGAGCAGGGCAACAGGAGTCCATGGA...GGTGTCCGTGGAGTGTTTTTGGCATGGTGACCTGTCTGGGCCCAGCATGTTGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR GCA 90 bp CACATCTGCAACATGCTGGGCCCAGACAGGTCACCATGCCAAAAACACTCCACGTGGAGCCTTGCCATCTaGTCCAGCACCAGGCACAGG +
Preference number: 4 (lower is better)
Translates to: HICNMLGPDRSPCQKHSTWSLAI*SSTRHR
Trigger: CCTGTGCCTGGTGCTGGAGCAGATGGCAAGGCTCCA...CGTGGAGTGTTTTTGGCATGGTGACCTGTCTGGGCCCAGCATGTTGCAGATGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR GCA 90 bp TGCTGGGCCCAGACAGGTCACCATGCCAAAAACACTCCACGGACACCTGACAATTCTCTGTCCCAGGGCTaGCAGCATGGCTCTGAGGAG +
Preference number: 4 (lower is better)
Translates to: CWAQTGHHAKNTPRTPDNSLSQG*QHGSEE
Trigger: CTCCTCAGAGCCATGCTGGCAGCCCTGGGACAGAGA...ATTGTCAGGTGTCCGTGGAGTGTTTTTGGCATGGTGACCTGTCTGGGCCCAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR GCA 90 bp GACTGCTTAGAGGAGAAAGATTCAGCCCTCGACTCAAGAGAGGAGGGCAGGCGTTCTCTGTCCCAGGGCTaGCAGCATGGCTCTGAGGAG +
Preference number: 4 (lower is better)
Translates to: DCLEEKDSALDSREEGRRSLSQG*QHGSEE
Trigger: CTCCTCAGAGCCATGCTGGCAGCCCTGGGACAGAGA...ACGCCTGCCCTCCTCTCTTGAGTCGAGGGCTGAATCTTTCTCCTCTAAGCAGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
CDS-3UTR CCA 90 bp TACACATCTGCAACATGCTGGGCCCAGACAGGTCACCATGCCAAAAACACTCCACAGGATGAGCACCCGTaGGCAGCGTCGGGGATCCGT +
Preference number: 4 (lower is better)
Translates to: YTSATCWAQTGHHAKNTPQDEHP*AASGIR
Trigger: ACGGATCCCCGACGCTGCCCACGGGTGCTCATCCTG...TGGAGTGTTTTTGGCATGGTGACCTGTCTGGGCCCAGCATGTTGCAGATGTGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR CCA 90 bp CATAAATACACATCTGCAACATGCTGGGCCCAGACAGGTCACCATGCCAAAAACGCTGGTGGGAGCTGTTaGGAGCCGGCGGGACCGCTC +
Preference number: 4 (lower is better)
Translates to: HKYTSATCWAQTGHHAKNAGGSC*EPAGPL
Trigger: GAGCGGTCCCGCCGGCTCCCAACAGCTCCCACCAGC...GTTTTTGGCATGGTGACCTGTCTGGGCCCAGCATGTTGCAGATGTGTATTTATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR CCA 90 bp TTCCTCATTCCTTGTGCAGTCTTCAGGAGTCCGGGGCAAGATTCCATGCAGAGGGTCCTGACAAGCTGGTaGGAGCTGTTGGGAGCCGGC +
Preference number: 4 (lower is better)
Translates to: FLIPCAVFRSPGQDSMQRVLTSW*ELLGAG
Trigger: GCCGGCTCCCAACAGCTCCCACCAGCTTGTCAGGAC...CCTCTGCATGGAATCTTGCCCCGGACTCCTGAAGACTGCACAAGGAATGAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR CCA 90 bp CAACATGCTGGGCCCAGACAGGTCACCATGCCAAAAACACTCCACGGACACCTGGTTGTCCTGACAAGCTaGTGGGAGCTGTTGGGAGCC +
Preference number: 4 (lower is better)
Translates to: QHAGPRQVTMPKTLHGHLVVLTS*WELLGA
Trigger: GGCTCCCAACAGCTCCCACCAGCTTGTCAGGACAAC...CAGGTGTCCGTGGAGTGTTTTTGGCATGGTGACCTGTCTGGGCCCAGCATGTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR CCA 90 bp GCAACATGCTGGGCCCAGACAGGTCACCATGCCAAAAACACTCCACGGACACCTCCTGTGTGCTCTGTCTaGCTTAGCAGCTCCCATGGC +
Preference number: 4 (lower is better)
Translates to: ATCWAQTGHHAKNTPRTPPVCSV*LSSSHG
Trigger: GCCATGGGAGCTGCTAAGCCAGACAGAGCACACAGG...AGGTGTCCGTGGAGTGTTTTTGGCATGGTGACCTGTCTGGGCCCAGCATGTTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR CCA 90 bp TGCAACATGCTGGGCCCAGACAGGTCACCATGCCAAAAACACTCCACGGACACCCCTGTGTGCTCTGTCTaGCTTAGCAGCTCCCATGGC +
Preference number: 4 (lower is better)
Translates to: CNMLGPDRSPCQKHSTDTPVCSV*LSSSHG
Trigger: GCCATGGGAGCTGCTAAGCCAGACAGAGCACACAGG...GGTGTCCGTGGAGTGTTTTTGGCATGGTGACCTGTCTGGGCCCAGCATGTTGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR CCA 90 bp TACACATCTGCAACATGCTGGGCCCAGACAGGTCACCATGCCAAAAACACTCCAGCAGCCTGGGAGGGTTaGCACTGGGCACCTCCACCT +
Preference number: 4 (lower is better)
Translates to: YTSATCWAQTGHHAKNTPAAWEG*HWAPPP
Trigger: AGGTGGAGGTGCCCAGTGCCAACCCTCCCAGGCTGC...TGGAGTGTTTTTGGCATGGTGACCTGTCTGGGCCCAGCATGTTGCAGATGTGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR CCA 90 bp GGCTCTGAGGAGGAAAGCTCAGTAACTGCCCACTGGGGAATAAAGGTCAGTTCCGGGTTTCTGGCAGCCTaGGAGGGTTGGCACTGGGCA +
Preference number: 4 (lower is better)
Translates to: GSEEESSVTAHWGIKVSSGFLAA*EGWHWA
Trigger: TGCCCAGTGCCAACCCTCCCAGGCTGCCAGAAACCC...GGAACTGACCTTTATTCCCCAGTGGGCAGTTACTGAGCTTTCCTCCTCAGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR CCA 90 bp TGCAACATGCTGGGCCCAGACAGGTCACCATGCCAAAAACACTCCACGGACACCGTGTCCCTGGGAGGATaGCAAGTGGTACGTTGGCTC +
Preference number: 4 (lower is better)
Translates to: CNMLGPDRSPCQKHSTDTVSLGG*QVVRWL
Trigger: GAGCCAACGTACCACTTGCCATCCTCCCAGGGACAC...GGTGTCCGTGGAGTGTTTTTGGCATGGTGACCTGTCTGGGCCCAGCATGTTGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR CCA 90 bp CACATTCTGGTCCTAGCTGTCACTGACTCACCGTGCGGCTTTGGAAAAGCAACTGGGGGCTCAGGGTGGTaGTGGCTTCTCCGGCAGATC +
Preference number: 4 (lower is better)
Translates to: HILVLAVTDSPCGFGKATGGSGW*WLLRQI
Trigger: GATCTGCCGGAGAAGCCACCACCACCCTGAGCCCCC...AGTTGCTTTTCCAAAGCCGCACGGTGAGTCAGTGACAGCTAGGACCAGAATGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495957.1
CDS-3UTR CCA 90 bp ATACCATTGCGCATAAATACACATCTGCAACATGCTGGGCCCAGACAGGTCACCGCAGGGGGCTCAGGGTaGTGGTGGCTTCTCCGGCAG +
Preference number: 4 (lower is better)
Translates to: IPLRINTHLQHAGPRQVTAGGSG*WWLLRQ
Trigger: CTGCCGGAGAAGCCACCACCACCCTGAGCCCCCTGC...GGTGACCTGTCTGGGCCCAGCATGTTGCAGATGTGTATTTATGCGCAATGGTAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000615223.2
CDS-3UTR CCA 90 bp GAGGAAAGCTCAGTAACTGCCCACTGGGGAATAAAGGTCAGTTCCATCCTTCTGGCAGGGGGCTCAGGGTaGTGGTGGCTTCTCCGGCAG +
Preference number: 4 (lower is better)
Translates to: EESSVTAHWGIKVSSILLAGGSG*WWLLRQ
Trigger: CTGCCGGAGAAGCCACCACCACCCTGAGCCCCCTGC...CAGAAGGATGGAACTGACCTTTATTCCCCAGTGGGCAGTTACTGAGCTTTCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000615223.2
CDS-3UTR CCA 90 bp TGCAACATGCTGGGCCCAGACAGGTCACCATGCCAAAAACACTCCACGGACACCTTTCAGGGAGGTCCCTaGACTCGATCCTGGGGTCAG +
Preference number: 4 (lower is better)
Translates to: CNMLGPDRSPCQKHSTDTFQGGP*TRSWGQ
Trigger: CTGACCCCAGGATCGAGTCCAGGGACCTCCCTGAAA...GGTGTCCGTGGAGTGTTTTTGGCATGGTGACCTGTCTGGGCCCAGCATGTTGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000615223.2
CDS-3UTR CCA 90 bp GCAACATGCTGGGCCCAGACAGGTCACCATGCCAAAAACACTCCACGGACACCTGGAGCTGCGGCATCTTaGGGGCCTCTCAAGAAACCA +
Preference number: 4 (lower is better)
Translates to: ATCWAQTGHHAKNTPRTPGAAAS*GPLKKP
Trigger: TGGTTTCTTGAGAGGCCCCCAAGATGCCGCAGCTCC...AGGTGTCCGTGGAGTGTTTTTGGCATGGTGACCTGTCTGGGCCCAGCATGTTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR CCA 90 bp GAAGCCCAGGGATTTCTGGTGAGGAGGAAGAGCCCTGGAGCTGCGGCATCTTGGACATCTGCAACATGCTaGGCCCAGACAGGTCACCAT +
Preference number: 4 (lower is better)
Translates to: EAQGFLVRRKSPGAAASWTSATC*AQTGHH
Trigger: ATGGTGACCTGTCTGGGCCCAGCATGTTGCAGATGT...CCAAGATGCCGCAGCTCCAGGGCTCTTCCTCCTCACCAGAAATCCCTGGGCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR TCA 90 bp GGCTCTGAGGAGGAAAGCTCAGTAACTGCCCACTGGGGAATAAAGGTCAGTTCCAAGTCCAGGGAGTCCTaGGAAAGGCCCGGTAAGGCG +
Preference number: 4 (lower is better)
Translates to: GSEEESSVTAHWGIKVSSKSRES*ERPGKA
Trigger: CGCCTTACCGGGCCTTTCTCAGGACTCCCTGGACTT...GGAACTGACCTTTATTCCCCAGTGGGCAGTTACTGAGCTTTCCTCCTCAGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR TCA 90 bp TCAACCCTTTGGATGCATTATTTCAGAAGAGATGGTTGGATCCAGCCAGCTTGCCGGTGGGGGCGGCACTaGGGCCTTTCAGGGAGGTCC +
Preference number: 4 (lower is better)
Translates to: STLWMHYFRRDGWIQPACRWGRH*GLSGRS
Trigger: GGACCTCCCTGAAAGGCCTCAGTGCCGCCCCCACCG...GCAAGCTGGCTGGATCCAACCATCTCTTCTGAAATAATGCATCCAAAGGGTTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR TCA 90 bp GAAGCCCAGGGATTTCTGGTGAGGAGGAAGAGCCCTGGAGCTGCGGCATCTTGGTCCATCCTTCTGCAGTaGCCTCCCCCAGAATATCAA +
Preference number: 4 (lower is better)
Translates to: EAQGFLVRRKSPGAAASWSILLQ*PPPEYQ
Trigger: TTGATATTCTGGGGGAGGTCACTGCAGAAGGATGGA...CCAAGATGCCGCAGCTCCAGGGCTCTTCCTCCTCACCAGAAATCCCTGGGCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR GCA 90 bp CACATCTGCAACATGCTGGGCCCAGACAGGTCACCATGCCAAAAACACTCCACGCGGGGCAAGATTCCATaGAGAGGCAGCCAAAGCCAC +
Preference number: 4 (lower is better)
Translates to: HICNMLGPDRSPCQKHSTRGKIP*RGSQSH
Trigger: GTGGCTTTGGCTGCCTCTGCATGGAATCTTGCCCCG...CGTGGAGTGTTTTTGGCATGGTGACCTGTCTGGGCCCAGCATGTTGCAGATGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR GCA 90 bp CTTAGAGGAGAAAGATTCAGCCCTCGACTCAAGAGAGGAGGGCAGGCGTCAGCACGGGGCAAGATTCCATaGAGAGGCAGCCAAAGCCAC +
Preference number: 4 (lower is better)
Translates to: LRGERFSPRLKRGGQASARGKIP*RGSQSH
Trigger: GTGGCTTTGGCTGCCTCTGCATGGAATCTTGCCCCG...TGCTGACGCCTGCCCTCCTCTCTTGAGTCGAGGGCTGAATCTTTCTCCTCTAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
CDS-3UTR CCA 90 bp TGCTTAGAGGAGAAAGATTCAGCCCTCGACTCAAGAGAGGAGGGCAGGCGTCAGGTTGTCCTGACAAGCTaGTGGGAGCTGTTGGGAGCC +
Preference number: 4 (lower is better)
Translates to: CLEEKDSALDSREEGRRQVVLTS*WELLGA
Trigger: GGCTCCCAACAGCTCCCACCAGCTTGTCAGGACAAC...CTGACGCCTGCCCTCCTCTCTTGAGTCGAGGGCTGAATCTTTCTCCTCTAAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
CDS-3UTR CCA 90 bp ATCTGCAACATGCTGGGCCCAGACAGGTCACCATGCCAAAAACACTCCACGGACGTTGTCCTGACAAGCTaGTGGGAGCTGTTGGGAGCC +
Preference number: 4 (lower is better)
Translates to: ICNMLGPDRSPCQKHSTDVVLTS*WELLGA
Trigger: GGCTCCCAACAGCTCCCACCAGCTTGTCAGGACAAC...GTCCGTGGAGTGTTTTTGGCATGGTGACCTGTCTGGGCCCAGCATGTTGCAGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR CCA 90 bp CTTAGAGGAGAAAGATTCAGCCCTCGACTCAAGAGAGGAGGGCAGGCGTCAGCACTGTGTCTGCCTCCATaGACTCCTGTTGCCCTGCTC +
Preference number: 4 (lower is better)
Translates to: LRGERFSPRLKRGGQASALCLPP*TPVALL
Trigger: GAGCAGGGCAACAGGAGTCCATGGAGGCAGACACAG...TGCTGACGCCTGCCCTCCTCTCTTGAGTCGAGGGCTGAATCTTTCTCCTCTAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
CDS-3UTR CCA 90 bp ATGCCAAAAACACTCCACGGACACCTGACAATGAGTGAGTTCACATTGTGGAAGCTCGCCGGGATCCCCTaGGGGCCTCTGGATCCGCAG +
Preference number: 4 (lower is better)
Translates to: MPKTLHGHLTMSEFTLWKLAGIP*GPLDPQ
Trigger: CTGCGGATCCAGAGGCCCCCAGGGGATCCCGGCGAG...CTTCCACAATGTGAACTCACTCATTGTCAGGTGTCCGTGGAGTGTTTTTGGCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR CCA 90 bp GACTGCTTAGAGGAGAAAGATTCAGCCCTCGACTCAAGAGAGGAGGGCAGGCGTCCTGTGTGCTCTGTCTaGCTTAGCAGCTCCCATGGC +
Preference number: 4 (lower is better)
Translates to: DCLEEKDSALDSREEGRRPVCSV*LSSSHG
Trigger: GCCATGGGAGCTGCTAAGCCAGACAGAGCACACAGG...ACGCCTGCCCTCCTCTCTTGAGTCGAGGGCTGAATCTTTCTCCTCTAAGCAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
CDS-3UTR CCA 90 bp CATACCATTGCGCATAAATACACATCTGCAACATGCTGGGCCCAGACAGGTCACGCAGCCTGGGAGGGTTaGCACTGGGCACCTCCACCT +
Preference number: 4 (lower is better)
Translates to: HTIAHKYTSATCWAQTGHAAWEG*HWAPPP
Trigger: AGGTGGAGGTGCCCAGTGCCAACCCTCCCAGGCTGC...GTGACCTGTCTGGGCCCAGCATGTTGCAGATGTGTATTTATGCGCAATGGTATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR CCA 90 bp TACACATCTGCAACATGCTGGGCCCAGACAGGTCACCATGCCAAAAACACTCCAGGGTTTCTGGCAGCCTaGGAGGGTTGGCACTGGGCA +
Preference number: 4 (lower is better)
Translates to: YTSATCWAQTGHHAKNTPGFLAA*EGWHWA
Trigger: TGCCCAGTGCCAACCCTCCCAGGCTGCCAGAAACCC...TGGAGTGTTTTTGGCATGGTGACCTGTCTGGGCCCAGCATGTTGCAGATGTGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR CCA 90 bp CATACCATTGCGCATAAATACACATCTGCAACATGCTGGGCCCAGACAGGTCACGGGGGCTCAGGGTGGTaGTGGCTTCTCCGGCAGATC +
Preference number: 4 (lower is better)
Translates to: HTIAHKYTSATCWAQTGHGGSGW*WLLRQI
Trigger: GATCTGCCGGAGAAGCCACCACCACCCTGAGCCCCC...GTGACCTGTCTGGGCCCAGCATGTTGCAGATGTGTATTTATGCGCAATGGTATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000615223.2
CDS-3UTR CCA 90 bp ATTCTGGTCCTAGCTGTCACTGACTCACCGTGCGGCTTTGGAAAAGCAACTACCTTTCCCCAGAGTTGCTaGCCCCCAGGGTGCCCATGC +
Preference number: 4 (lower is better)
Translates to: ILVLAVTDSPCGFGKATTFPQSC*PPGCPC
Trigger: GCATGGGCACCCTGGGGGCCAGCAACTCTGGGGAAA...GGTAGTTGCTTTTCCAAAGCCGCACGGTGAGTCAGTGACAGCTAGGACCAGAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000495957.1
CDS-3UTR TCA 90 bp ATCTGCAACATGCTGGGCCCAGACAGGTCACCATGCCAAAAACACTCCACGGACGGGCTCAGAACTCCCTaGGGATTCAAAGTCCAGGGA +
Preference number: 4 (lower is better)
Translates to: ICNMLGPDRSPCQKHSTDGLRTP*GFKVQG
Trigger: TCCCTGGACTTTGAATCCTCAGGGAGTTCTGAGCCC...GTCCGTGGAGTGTTTTTGGCATGGTGACCTGTCTGGGCCCAGCATGTTGCAGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR TCA 90 bp CTTAGAGGAGAAAGATTCAGCCCTCGACTCAAGAGAGGAGGGCAGGCGTCAGCAGGGCTCAGAACTCCCTaGGGATTCAAAGTCCAGGGA +
Preference number: 4 (lower is better)
Translates to: LRGERFSPRLKRGGQASAGLRTP*GFKVQG
Trigger: TCCCTGGACTTTGAATCCTCAGGGAGTTCTGAGCCC...TGCTGACGCCTGCCCTCCTCTCTTGAGTCGAGGGCTGAATCTTTCTCCTCTAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
CDS-3UTR TCA 90 bp CCCCCAGAATATCAACCCTTTGGATGCATTATTTCAGAAGAGATGGTTGGATCCCGGTGGGGGCGGCACTaGGGCCTTTCAGGGAGGTCC +
Preference number: 4 (lower is better)
Translates to: PPEYQPFGCIISEEMVGSRWGRH*GLSGRS
Trigger: GGACCTCCCTGAAAGGCCTCAGTGCCGCCCCCACCG...GGATCCAACCATCTCTTCTGAAATAATGCATCCAAAGGGTTGATATTCTGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR TCA 90 bp GTGCAGTCTTCAGGAGTCCGGGGCAAGATTCCATGCAGAGGCAGCCAAAGCCACTTCCCAGGTTGTCCCTaGTCTTCCTCATTCCTTGTG +
Preference number: 4 (lower is better)
Translates to: VQSSGVRGKIPCRGSQSHFPGCP*SSSFLV
Trigger: CACAAGGAATGAGGAAGATCAGGGACAACCTGGGAA...GTGGCTTTGGCTGCCTCTGCATGGAATCTTGCCCCGGACTCCTGAAGACTGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR GCA 90 bp TGCAACATGCTGGGCCCAGACAGGTCACCATGCCAAAAACACTCCACGGACACCCAGTTTGAGAAAGAGTaGCTCCCTGCCGACACCTCT +
Preference number: 4 (lower is better)
Translates to: CNMLGPDRSPCQKHSTDTQFEKE*LPADTS
Trigger: AGAGGTGTCGGCAGGGAGGCACTCTTTCTCAAACTG...GGTGTCCGTGGAGTGTTTTTGGCATGGTGACCTGTCTGGGCCCAGCATGTTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR GCA 90 bp GCAACATGCTGGGCCCAGACAGGTCACCATGCCAAAAACACTCCACGGACACCTCAGTTTGAGAAAGAGTaGCTCCCTGCCGACACCTCT +
Preference number: 4 (lower is better)
Translates to: ATCWAQTGHHAKNTPRTPQFEKE*LPADTS
Trigger: AGAGGTGTCGGCAGGGAGGCACTCTTTCTCAAACTG...AGGTGTCCGTGGAGTGTTTTTGGCATGGTGACCTGTCTGGGCCCAGCATGTTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR GCA 90 bp TGCATACCATTGCGCATAAATACACATCTGCAACATGCTGGGCCCAGACAGGTCCCCAGGGTCACCAGGTaGACCGAGAGGTCTCAGCCT +
Preference number: 4 (lower is better)
Translates to: CIPLRINTHLQHAGPRQVPRVTR*TERSQP
Trigger: AGGCTGAGACCTCTCGGTGCACCTGGTGACCCTGGG...GACCTGTCTGGGCCCAGCATGTTGCAGATGTGTATTTATGCGCAATGGTATGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR GCA 90 bp ATACCATTGCGCATAAATACACATCTGCAACATGCTGGGCCCAGACAGGTCACCCCCAGGGTCACCAGGTaGACCGAGAGGTCTCAGCCT +
Preference number: 4 (lower is better)
Translates to: IPLRINTHLQHAGPRQVTPRVTR*TERSQP
Trigger: AGGCTGAGACCTCTCGGTGCACCTGGTGACCCTGGG...GGTGACCTGTCTGGGCCCAGCATGTTGCAGATGTGTATTTATGCGCAATGGTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR GCA 90 bp GTGCAGTCTTCAGGAGTCCGGGGCAAGATTCCATGCAGAGGCAGCCAAAGCCACTGGATCCAGCCAGCTTaGAACACTGACAGTCACACA +
Preference number: 4 (lower is better)
Translates to: VQSSGVRGKIPCRGSQSHWIQPA*NTDSHT
Trigger: TGTGTGACTGTCAGTGTTGCAAGCTGGCTGGATCCA...GTGGCTTTGGCTGCCTCTGCATGGAATCTTGCCCCGGACTCCTGAAGACTGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR GCA 90 bp TTTGCGGGGACAATAATGACAACTGGCATGACAATCTCAGCATCCTGGCTTATCTGCTGGCCCCCAGGGTaGCCATGCATCCCCCACCTC +
Preference number: 4 (lower is better)
Translates to: FAGTIMTTGMTISASWLICWPPG*PCIPHL
Trigger: GAGGTGGGGGATGCATGGGCACCCTGGGGGCCAGCA...GATAAGCCAGGATGCTGAGATTGTCATGCCAGTTGTCATTATTGTCCCCGCAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000495957.1
CDS-3UTR CCA 90 bp AAGAAACCAAGGTTCCTGACCAGACTGCTTAGAGGAGAAAGATTCAGCCCTCGACAGGATGAGCACCCGTaGGCAGCGTCGGGGATCCGT +
Preference number: 4 (lower is better)
Translates to: KKPRFLTRLLRGERFSPRQDEHP*AASGIR
Trigger: ACGGATCCCCGACGCTGCCCACGGGTGCTCATCCTG...TCGAGGGCTGAATCTTTCTCCTCTAAGCAGTCTGGTCAGGAACCTTGGTTTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR CCA 90 bp CCCCCAGAATATCAACCCTTTGGATGCATTATTTCAGAAGAGATGGTTGGATCCGCTGGTGGGAGCTGTTaGGAGCCGGCGGGACCGCTC +
Preference number: 4 (lower is better)
Translates to: PPEYQPFGCIISEEMVGSAGGSC*EPAGPL
Trigger: GAGCGGTCCCGCCGGCTCCCAACAGCTCCCACCAGC...GGATCCAACCATCTCTTCTGAAATAATGCATCCAAAGGGTTGATATTCTGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR CCA 90 bp CATGACAATCTCAGCATCCTGGCTTATCAGTCTCCTCTCCGTGCCCTAACCTGGCCTGTGTGCTCTGTCTaGCTTAGCAGCTCCCATGGC +
Preference number: 4 (lower is better)
Translates to: HDNLSILAYQSPLRALTWPVCSV*LSSSHG
Trigger: GCCATGGGAGCTGCTAAGCCAGACAGAGCACACAGG...CCAGGTTAGGGCACGGAGAGGAGACTGATAAGCCAGGATGCTGAGATTGTCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495957.1
CDS-3UTR CCA 90 bp TGCATACCATTGCGCATAAATACACATCTGCAACATGCTGGGCCCAGACAGGTCTGGGAGGGTTGGCACTaGGCACCTCCACCTTTGGGG +
Preference number: 4 (lower is better)
Translates to: CIPLRINTHLQHAGPRQVWEGWH*APPPLG
Trigger: CCCCAAAGGTGGAGGTGCCCAGTGCCAACCCTCCCA...GACCTGTCTGGGCCCAGCATGTTGCAGATGTGTATTTATGCGCAATGGTATGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR CCA 90 bp CTCCCAGACTGCCTCTCAAGTTTTGCGGGGACAATAATGACAACTGGCATGACATGGGAGGGTTGGCACTaGGCACCTCCACCTTTGGGG +
Preference number: 4 (lower is better)
Translates to: LPDCLSSFAGTIMTTGMTWEGWH*APPPLG
Trigger: CCCCAAAGGTGGAGGTGCCCAGTGCCAACCCTCCCA...TGTCATGCCAGTTGTCATTATTGTCCCCGCAAAACTTGAGAGGCAGTCTGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495957.1
CDS-3UTR CCA 90 bp ATGCATACCATTGCGCATAAATACACATCTGCAACATGCTGGGCCCAGACAGGTGCAGCCTGGGAGGGTTaGCACTGGGCACCTCCACCT +
Preference number: 4 (lower is better)
Translates to: MHTIAHKYTSATCWAQTGAAWEG*HWAPPP
Trigger: AGGTGGAGGTGCCCAGTGCCAACCCTCCCAGGCTGC...ACCTGTCTGGGCCCAGCATGTTGCAGATGTGTATTTATGCGCAATGGTATGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR CCA 90 bp TTAACTACTGTTTCTTCTAGCAGCCCCTCCCAGACTGCCTCTCAAGTTTTGCGGGGGTTTCTGGCAGCCTaGGAGGGTTGGCACTGGGCA +
Preference number: 4 (lower is better)
Translates to: LTTVSSSSPSQTASQVLRGFLAA*EGWHWA
Trigger: TGCCCAGTGCCAACCCTCCCAGGCTGCCAGAAACCC...CCGCAAAACTTGAGAGGCAGTCTGGGAGGGGCTGCTAGAAGAAACAGTAGTTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000495957.1
CDS-3UTR CCA 90 bp CTTAGAGGAGAAAGATTCAGCCCTCGACTCAAGAGAGGAGGGCAGGCGTCAGCATGGCAAGTGGTACGTTaGCTCCACTGGGGTTTCTGG +
Preference number: 4 (lower is better)
Translates to: LRGERFSPRLKRGGQASAWQVVR*LHWGFW
Trigger: CCAGAAACCCCAGTGGAGCCAACGTACCACTTGCCA...TGCTGACGCCTGCCCTCCTCTCTTGAGTCGAGGGCTGAATCTTTCTCCTCTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
CDS-3UTR CCA 90 bp CATGACAATCTCAGCATCCTGGCTTATCAGTCTCCTCTCCGTGCCCTAACCTGGGTGTCCCTGGGAGGATaGCAAGTGGTACGTTGGCTC +
Preference number: 4 (lower is better)
Translates to: HDNLSILAYQSPLRALTWVSLGG*QVVRWL
Trigger: GAGCCAACGTACCACTTGCCATCCTCCCAGGGACAC...CCAGGTTAGGGCACGGAGAGGAGACTGATAAGCCAGGATGCTGAGATTGTCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495957.1
CDS-3UTR CCA 90 bp CTGCCTCTCAAGTTTTGCGGGGACAATAATGACAACTGGCATGACAATCTCAGCGGCTCAGGGTGGTGGTaGCTTCTCCGGCAGATCCGG +
Preference number: 4 (lower is better)
Translates to: LPLKFCGDNNDNWHDNLSGSGWW*LLRQIR
Trigger: CCGGATCTGCCGGAGAAGCCACCACCACCCTGAGCC...GCTGAGATTGTCATGCCAGTTGTCATTATTGTCCCCGCAAAACTTGAGAGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495957.1
CDS-3UTR CCA 90 bp CTCAAGTTTTGCGGGGACAATAATGACAACTGGCATGACAATCTCAGCATCCTGGCAGGGGGCTCAGGGTaGTGGTGGCTTCTCCGGCAG +
Preference number: 4 (lower is better)
Translates to: LKFCGDNNDNWHDNLSILAGGSG*WWLLRQ
Trigger: CTGCCGGAGAAGCCACCACCACCCTGAGCCCCCTGC...CAGGATGCTGAGATTGTCATGCCAGTTGTCATTATTGTCCCCGCAAAACTTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000495957.1
CDS-3UTR CCA 90 bp ATCTGCAACATGCTGGGCCCAGACAGGTCACCATGCCAAAAACACTCCACGGACCGATCCTTGTGTCCCTaGGAGGATGGCAAGTGGTAC +
Preference number: 4 (lower is better)
Translates to: ICNMLGPDRSPCQKHSTDRSLCP*EDGKWY
Trigger: GTACCACTTGCCATCCTCCCAGGGACACAAGGATCG...GTCCGTGGAGTGTTTTTGGCATGGTGACCTGTCTGGGCCCAGCATGTTGCAGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000614574.4
CDS-3UTR TCA 90 bp ATACCATTGCGCATAAATACACATCTGCAACATGCTGGGCCCAGACAGGTCACCAAGTCCAGGGAGTCCTaGGAAAGGCCCGGTAAGGCG +
Preference number: 4 (lower is better)
Translates to: IPLRINTHLQHAGPRQVTKSRES*ERPGKA
Trigger: CGCCTTACCGGGCCTTTCTCAGGACTCCCTGGACTT...GGTGACCTGTCTGGGCCCAGCATGTTGCAGATGTGTATTTATGCGCAATGGTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR TCA 90 bp TTCCTCATTCCTTGTGCAGTCTTCAGGAGTCCGGGGCAAGATTCCATGCAGAGGGGGCTCAGAACTCCCTaGGGATTCAAAGTCCAGGGA +
Preference number: 4 (lower is better)
Translates to: FLIPCAVFRSPGQDSMQRGLRTP*GFKVQG
Trigger: TCCCTGGACTTTGAATCCTCAGGGAGTTCTGAGCCC...CCTCTGCATGGAATCTTGCCCCGGACTCCTGAAGACTGCACAAGGAATGAGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR TCA 90 bp CTGACCAGACTGCTTAGAGGAGAAAGATTCAGCCCTCGACTCAAGAGAGGAGGGCTGCCAGCATGGCTCTaGGGAGGAAAGCTCAGTAAC +
Preference number: 4 (lower is better)
Translates to: LTRLLRGERFSPRLKRGGLPAWL*GGKLSN
Trigger: GTTACTGAGCTTTCCTCCTCAGAGCCATGCTGGCAG...CCCTCCTCTCTTGAGTCGAGGGCTGAATCTTTCTCCTCTAAGCAGTCTGGTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR TCA 90 bp AGCCCAGGGATTTCTGGTGAGGAGGAAGAGCCCTGGAGCTGCGGCATCTTGGGGTACAGGCATCTGGTTTaGATTAAGACCTGTAAACGC +
Preference number: 4 (lower is better)
Translates to: SPGISGEEEEPWSCGILGYRHLV*IKTCKR
Trigger: GCGTTTACAGGTCTTAATTCAAACCAGATGCCTGTA...CCCCAAGATGCCGCAGCTCCAGGGCTCTTCCTCCTCACCAGAAATCCCTGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR GCA 90 bp GAGGAAAGCTCAGTAACTGCCCACTGGGGAATAAAGGTCAGTTCCATCCTTCTGGGACTCCTGTTGCCCTaGTCCAAGGGGCACTTCACG +
Preference number: 4 (lower is better)
Translates to: EESSVTAHWGIKVSSILLGLLLP*SKGHFT
Trigger: CGTGAAGTGCCCCTTGGAGCAGGGCAACAGGAGTCC...CAGAAGGATGGAACTGACCTTTATTCCCCAGTGGGCAGTTACTGAGCTTTCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR GCA 90 bp ATACCATTGCGCATAAATACACATCTGCAACATGCTGGGCCCAGACAGGTCACCTGGAGCCTTGCCATCTaGTCCAGCACCAGGCACAGG +
Preference number: 4 (lower is better)
Translates to: IPLRINTHLQHAGPRQVTWSLAI*SSTRHR
Trigger: CCTGTGCCTGGTGCTGGAGCAGATGGCAAGGCTCCA...GGTGACCTGTCTGGGCCCAGCATGTTGCAGATGTGTATTTATGCGCAATGGTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR GCA 90 bp CAACATGCTGGGCCCAGACAGGTCACCATGCCAAAAACACTCCACGGACACCTGTGGATCCAGCCAGCTTaGAACACTGACAGTCACACA +
Preference number: 4 (lower is better)
Translates to: QHAGPRQVTMPKTLHGHLWIQPA*NTDSHT
Trigger: TGTGTGACTGTCAGTGTTGCAAGCTGGCTGGATCCA...CAGGTGTCCGTGGAGTGTTTTTGGCATGGTGACCTGTCTGGGCCCAGCATGTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR GCA 90 bp CAACATGCTGGGCCCAGACAGGTCACCATGCCAAAAACACTCCACGGACACCTGTCAGTTCCATCCTTCTaGAGTGACCTCCCCCAGAAT +
Preference number: 4 (lower is better)
Translates to: QHAGPRQVTMPKTLHGHLSVPSF*SDLPQN
Trigger: ATTCTGGGGGAGGTCACTGCAGAAGGATGGAACTGA...CAGGTGTCCGTGGAGTGTTTTTGGCATGGTGACCTGTCTGGGCCCAGCATGTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR GCA 90 bp TGCATACCATTGCGCATAAATACACATCTGCAACATGCTGGGCCCAGACAGGTCTCTCTGTCCCAGGGCTaGCAGCATGGCTCTGAGGAG +
Preference number: 4 (lower is better)
Translates to: CIPLRINTHLQHAGPRQVSLSQG*QHGSEE
Trigger: CTCCTCAGAGCCATGCTGGCAGCCCTGGGACAGAGA...GACCTGTCTGGGCCCAGCATGTTGCAGATGTGTATTTATGCGCAATGGTATGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR CCA 90 bp CTCAAGTTTTGCGGGGACAATAATGACAACTGGCATGACAATCTCAGCATCCTGGCAGCCTGGGAGGGTTaGCACTGGGCACCTCCACCT +
Preference number: 4 (lower is better)
Translates to: LKFCGDNNDNWHDNLSILAAWEG*HWAPPP
Trigger: AGGTGGAGGTGCCCAGTGCCAACCCTCCCAGGCTGC...CAGGATGCTGAGATTGTCATGCCAGTTGTCATTATTGTCCCCGCAAAACTTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495957.1
CDS-3UTR CCA 90 bp GGCTCTGAGGAGGAAAGCTCAGTAACTGCCCACTGGGGAATAAAGGTCAGTTCCTGGCAAGTGGTACGTTaGCTCCACTGGGGTTTCTGG +
Preference number: 4 (lower is better)
Translates to: GSEEESSVTAHWGIKVSSWQVVR*LHWGFW
Trigger: CCAGAAACCCCAGTGGAGCCAACGTACCACTTGCCA...GGAACTGACCTTTATTCCCCAGTGGGCAGTTACTGAGCTTTCCTCCTCAGAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR CCA 90 bp TACACATCTGCAACATGCTGGGCCCAGACAGGTCACCATGCCAAAAACACTCCATCCCGCTTGTGTCCCTaGGAGGATGGCAAGTGGTAC +
Preference number: 4 (lower is better)
Translates to: YTSATCWAQTGHHAKNTPSRLCP*EDGKWY
Trigger: GTACCACTTGCCATCCTCCCAGGGACACAAGCGGGA...TGGAGTGTTTTTGGCATGGTGACCTGTCTGGGCCCAGCATGTTGCAGATGTGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289989.10
ENST00000615223.2
CDS-3UTR CCA 90 bp TGCAACATGCTGGGCCCAGACAGGTCACCATGCCAAAAACACTCCACGGACACCGTCAGCAGCTTTTCCTaGCAATGTGGAGAAGCAGCA +
Preference number: 4 (lower is better)
Translates to: CNMLGPDRSPCQKHSTDTVSSFS*QCGEAA
Trigger: TGCTGCTTCTCCACATTGCCAGGAAAAGCTGCTGAC...GGTGTCCGTGGAGTGTTTTTGGCATGGTGACCTGTCTGGGCCCAGCATGTTGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR CCA 90 bp CATAAATACACATCTGCAACATGCTGGGCCCAGACAGGTCACCATGCCAAAAACGAGGAGGAAGAGCCCTaGAGCTGCGGCATCTTGGGG +
Preference number: 4 (lower is better)
Translates to: HKYTSATCWAQTGHHAKNEEEEP*SCGILG
Trigger: CCCCAAGATGCCGCAGCTCCAGGGCTCTTCCTCCTC...GTTTTTGGCATGGTGACCTGTCTGGGCCCAGCATGTTGCAGATGTGTATTTATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR CCA 90 bp GTGCAGTCTTCAGGAGTCCGGGGCAAGATTCCATGCAGAGGCAGCCAAAGCCACAGTGAGTTCACATTGTaGAAGCCCAGGGATTTCTGG +
Preference number: 4 (lower is better)
Translates to: VQSSGVRGKIPCRGSQSHSEFTL*KPRDFW
Trigger: CCAGAAATCCCTGGGCTTCCACAATGTGAACTCACT...GTGGCTTTGGCTGCCTCTGCATGGAATCTTGCCCCGGACTCCTGAAGACTGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR CCA 90 bp ATCTGCAACATGCTGGGCCCAGACAGGTCACCATGCCAAAAACACTCCACGGACACATCTGCAACATGCTaGGCCCAGACAGGTCACCAT +
Preference number: 4 (lower is better)
Translates to: ICNMLGPDRSPCQKHSTDTSATC*AQTGHH
Trigger: ATGGTGACCTGTCTGGGCCCAGCATGTTGCAGATGT...GTCCGTGGAGTGTTTTTGGCATGGTGACCTGTCTGGGCCCAGCATGTTGCAGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR CCA 90 bp GTGCAGTCTTCAGGAGTCCGGGGCAAGATTCCATGCAGAGGCAGCCAAAGCCACTCAGTAACTGCCCACTaGGGAATAAAGGTCAGTTCC +
Preference number: 4 (lower is better)
Translates to: VQSSGVRGKIPCRGSQSHSVTAH*GIKVSS
Trigger: GGAACTGACCTTTATTCCCCAGTGGGCAGTTACTGA...GTGGCTTTGGCTGCCTCTGCATGGAATCTTGCCCCGGACTCCTGAAGACTGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR CCA 90 bp AGTTTTGCGGGGACAATAATGACAACTGGCATGACAATCTCAGCATCCTGGCTTGGCACGGGGCTCACCTaGGGTCAGAGCCATCAGGAG +
Preference number: 4 (lower is better)
Translates to: SFAGTIMTTGMTISASWLGTGLT*GQSHQE
Trigger: CTCCTGATGGCTCTGACCCCAGGTGAGCCCCGTGCC...AAGCCAGGATGCTGAGATTGTCATGCCAGTTGTCATTATTGTCCCCGCAAAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000495957.1
CDS-3UTR TCA 90 bp ATGCATACCATTGCGCATAAATACACATCTGCAACATGCTGGGCCCAGACAGGTCCCTGCCGACACCTCTaGACTTGTCACCTCTCTCCC +
Preference number: 4 (lower is better)
Translates to: MHTIAHKYTSATCWAQTGPCRHL*TCHLSP
Trigger: GGGAGAGAGGTGACAAGTTCAGAGGTGTCGGCAGGG...ACCTGTCTGGGCCCAGCATGTTGCAGATGTGTATTTATGCGCAATGGTATGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR TCA 90 bp TACACATCTGCAACATGCTGGGCCCAGACAGGTCACCATGCCAAAAACACTCCAGGGCTCAGAACTCCCTaGGGATTCAAAGTCCAGGGA +
Preference number: 4 (lower is better)
Translates to: YTSATCWAQTGHHAKNTPGLRTP*GFKVQG
Trigger: TCCCTGGACTTTGAATCCTCAGGGAGTTCTGAGCCC...TGGAGTGTTTTTGGCATGGTGACCTGTCTGGGCCCAGCATGTTGCAGATGTGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR TCA 90 bp CATAAATACACATCTGCAACATGCTGGGCCCAGACAGGTCACCATGCCAAAAACGGAGCGGTGTTGTCCTaGCAAGCTGGTGGGAGCTGT +
Preference number: 4 (lower is better)
Translates to: HKYTSATCWAQTGHHAKNGAVLS*QAGGSC
Trigger: ACAGCTCCCACCAGCTTGTCAGGACAACACCGCTCC...GTTTTTGGCATGGTGACCTGTCTGGGCCCAGCATGTTGCAGATGTGTATTTATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR TCA 90 bp GAGGAAAGCTCAGTAACTGCCCACTGGGGAATAAAGGTCAGTTCCATCCTTCTGCTCCACCTTTGGGGGTaGAGCAGCCTTTGCTCCTGT +
Preference number: 4 (lower is better)
Translates to: EESSVTAHWGIKVSSILLLHLWG*SSLCSC
Trigger: ACAGGAGCAAAGGCTGCTTCACCCCCAAAGGTGGAG...CAGAAGGATGGAACTGACCTTTATTCCCCAGTGGGCAGTTACTGAGCTTTCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR TCA 90 bp TGCAACATGCTGGGCCCAGACAGGTCACCATGCCAAAAACACTCCACGGACACCACACCTGACAATGAGTaGGTTCACATTGTGGAAGCC +
Preference number: 4 (lower is better)
Translates to: CNMLGPDRSPCQKHSTDTTPDNE*VHIVEA
Trigger: GGCTTCCACAATGTGAACTCACTCATTGTCAGGTGT...GGTGTCCGTGGAGTGTTTTTGGCATGGTGACCTGTCTGGGCCCAGCATGTTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR TCA 90 bp GACTGCTTAGAGGAGAAAGATTCAGCCCTCGACTCAAGAGAGGAGGGCAGGCGTTCCATCCTTCTGCAGTaGCCTCCCCCAGAATATCAA +
Preference number: 4 (lower is better)
Translates to: DCLEEKDSALDSREEGRRSILLQ*PPPEYQ
Trigger: TTGATATTCTGGGGGAGGTCACTGCAGAAGGATGGA...ACGCCTGCCCTCCTCTCTTGAGTCGAGGGCTGAATCTTTCTCCTCTAAGCAGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
CDS-3UTR TCA 90 bp GAAGCCCAGGGATTTCTGGTGAGGAGGAAGAGCCCTGGAGCTGCGGCATCTTGGTACAGGCATCTGGTTTaGATTAAGACCTGTAAACGC +
Preference number: 4 (lower is better)
Translates to: EAQGFLVRRKSPGAAASWYRHLV*IKTCKR
Trigger: GCGTTTACAGGTCTTAATTCAAACCAGATGCCTGTA...CCAAGATGCCGCAGCTCCAGGGCTCTTCCTCCTCACCAGAAATCCCTGGGCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR GCA 90 bp CATAAATACACATCTGCAACATGCTGGGCCCAGACAGGTCACCATGCCAAAAACGAGCTGCTGGAGCCTTaGCATCTGCTCCAGCACCAG +
Preference number: 4 (lower is better)
Translates to: HKYTSATCWAQTGHHAKNELLEP*HLLQHQ
Trigger: CTGGTGCTGGAGCAGATGGCAAGGCTCCAGCAGCTC...GTTTTTGGCATGGTGACCTGTCTGGGCCCAGCATGTTGCAGATGTGTATTTATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR CCA 90 bp ACTAGTACAGGCATCTGGTTTGAATTAAGACCTGTAAACGCTAGTACGGAGCAGACCTCCCCCAGCTTCTaGCTGGCCAGGAGTCGGCCT +
Preference number: 4 (lower is better)
Translates to: TSTGIWFELRPVNASTEQTSPSF*LARSRP
Trigger: AGGCCGACTCCTGGCCAGCCAGAAGCTGGGGGAGGT...CTGCTCCGTACTAGCGTTTACAGGTCTTAATTCAAACCAGATGCCTGTACTAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR CCA 90 bp AGTCACACAGAGATATGCATACCATTGCGCATAAATACACATCTGCAACATGCTGCTGGTGGGAGCTGTTaGGAGCCGGCGGGACCGCTC +
Preference number: 4 (lower is better)
Translates to: SHTEICIPLRINTHLQHAAGGSC*EPAGPL
Trigger: GAGCGGTCCCGCCGGCTCCCAACAGCTCCCACCAGC...AGCATGTTGCAGATGTGTATTTATGCGCAATGGTATGCATATCTCTGTGTGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR CCA 90 bp CATACCATTGCGCATAAATACACATCTGCAACATGCTGGGCCCAGACAGGTCACGTTGTCCTGACAAGCTaGTGGGAGCTGTTGGGAGCC +
Preference number: 4 (lower is better)
Translates to: HTIAHKYTSATCWAQTGHVVLTS*WELLGA
Trigger: GGCTCCCAACAGCTCCCACCAGCTTGTCAGGACAAC...GTGACCTGTCTGGGCCCAGCATGTTGCAGATGTGTATTTATGCGCAATGGTATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR CCA 90 bp ATACCATTGCGCATAAATACACATCTGCAACATGCTGGGCCCAGACAGGTCACCCTGTGTCTGCCTCCATaGACTCCTGTTGCCCTGCTC +
Preference number: 4 (lower is better)
Translates to: IPLRINTHLQHAGPRQVTLCLPP*TPVALL
Trigger: GAGCAGGGCAACAGGAGTCCATGGAGGCAGACACAG...GGTGACCTGTCTGGGCCCAGCATGTTGCAGATGTGTATTTATGCGCAATGGTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR CCA 90 bp AGTCACACAGAGATATGCATACCATTGCGCATAAATACACATCTGCAACATGCTCTCGCCGGGATCCCCTaGGGGCCTCTGGATCCGCAG +
Preference number: 4 (lower is better)
Translates to: SHTEICIPLRINTHLQHALAGIP*GPLDPQ
Trigger: CTGCGGATCCAGAGGCCCCCAGGGGATCCCGGCGAG...AGCATGTTGCAGATGTGTATTTATGCGCAATGGTATGCATATCTCTGTGTGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR CCA 90 bp TCAACCCTTTGGATGCATTATTTCAGAAGAGATGGTTGGATCCAGCCAGCTTGCGGGTTTCTGGCAGCCTaGGAGGGTTGGCACTGGGCA +
Preference number: 4 (lower is better)
Translates to: STLWMHYFRRDGWIQPACGFLAA*EGWHWA
Trigger: TGCCCAGTGCCAACCCTCCCAGGCTGCCAGAAACCC...GCAAGCTGGCTGGATCCAACCATCTCTTCTGAAATAATGCATCCAAAGGGTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR CCA 90 bp CATAAATACACATCTGCAACATGCTGGGCCCAGACAGGTCACCATGCCAAAAACGTACGTTGGCTCCACTaGGGTTTCTGGCAGCCTGGG +
Preference number: 4 (lower is better)
Translates to: HKYTSATCWAQTGHHAKNVRWLH*GFWQPG
Trigger: CCCAGGCTGCCAGAAACCCCAGTGGAGCCAACGTAC...GTTTTTGGCATGGTGACCTGTCTGGGCCCAGCATGTTGCAGATGTGTATTTATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR CCA 90 bp ATGCATACCATTGCGCATAAATACACATCTGCAACATGCTGGGCCCAGACAGGTGTACGTTGGCTCCACTaGGGTTTCTGGCAGCCTGGG +
Preference number: 4 (lower is better)
Translates to: MHTIAHKYTSATCWAQTGVRWLH*GFWQPG
Trigger: CCCAGGCTGCCAGAAACCCCAGTGGAGCCAACGTAC...ACCTGTCTGGGCCCAGCATGTTGCAGATGTGTATTTATGCGCAATGGTATGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR CCA 90 bp CCAGACTGCCTCTCAAGTTTTGCGGGGACAATAATGACAACTGGCATGACAATCGTACGTTGGCTCCACTaGGGTTTCTGGCAGCCTGGG +
Preference number: 4 (lower is better)
Translates to: PDCLSSFAGTIMTTGMTIVRWLH*GFWQPG
Trigger: CCCAGGCTGCCAGAAACCCCAGTGGAGCCAACGTAC...GATTGTCATGCCAGTTGTCATTATTGTCCCCGCAAAACTTGAGAGGCAGTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495957.1
CDS-3UTR CCA 90 bp CACATCTGCAACATGCTGGGCCCAGACAGGTCACCATGCCAAAAACACTCCACGGTCAGCAGCTTTTCCTaGCAATGTGGAGAAGCAGCA +
Preference number: 4 (lower is better)
Translates to: HICNMLGPDRSPCQKHSTVSSFS*QCGEAA
Trigger: TGCTGCTTCTCCACATTGCCAGGAAAAGCTGCTGAC...CGTGGAGTGTTTTTGGCATGGTGACCTGTCTGGGCCCAGCATGTTGCAGATGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR CCA 90 bp TGCAACATGCTGGGCCCAGACAGGTCACCATGCCAAAAACACTCCACGGACACCTCAGTAACTGCCCACTaGGGAATAAAGGTCAGTTCC +
Preference number: 4 (lower is better)
Translates to: CNMLGPDRSPCQKHSTDTSVTAH*GIKVSS
Trigger: GGAACTGACCTTTATTCCCCAGTGGGCAGTTACTGA...GGTGTCCGTGGAGTGTTTTTGGCATGGTGACCTGTCTGGGCCCAGCATGTTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR CCA 90 bp TACACATCTGCAACATGCTGGGCCCAGACAGGTCACCATGCCAAAAACACTCCATTTCAGGGAGGTCCCTaGACTCGATCCTTGTGTCCC +
Preference number: 4 (lower is better)
Translates to: YTSATCWAQTGHHAKNTPFQGGP*TRSLCP
Trigger: GGGACACAAGGATCGAGTCCAGGGACCTCCCTGAAA...TGGAGTGTTTTTGGCATGGTGACCTGTCTGGGCCCAGCATGTTGCAGATGTGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000614574.4
CDS-3UTR TCA 90 bp CCCAGAATATCAACCCTTTGGATGCATTATTTCAGAAGAGATGGTTGGATCCAGACCTCTCTCCCAGGATaGGCACCCGTGGGCAGCGTC +
Preference number: 4 (lower is better)
Translates to: PRISTLWMHYFRRDGWIQTSLPG*APVGSV
Trigger: GACGCTGCCCACGGGTGCTCATCCTGGGAGAGAGGT...CTGGATCCAACCATCTCTTCTGAAATAATGCATCCAAAGGGTTGATATTCTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR TCA 90 bp AAGAAACCAAGGTTCCTGACCAGACTGCTTAGAGGAGAAAGATTCAGCCCTCGACTCCACCTTTGGGGGTaGAGCAGCCTTTGCTCCTGT +
Preference number: 4 (lower is better)
Translates to: KKPRFLTRLLRGERFSPRLHLWG*SSLCSC
Trigger: ACAGGAGCAAAGGCTGCTTCACCCCCAAAGGTGGAG...TCGAGGGCTGAATCTTTCTCCTCTAAGCAGTCTGGTCAGGAACCTTGGTTTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR TCA 90 bp ATACCATTGCGCATAAATACACATCTGCAACATGCTGGGCCCAGACAGGTCACCCTGCCAGCATGGCTCTaGGGAGGAAAGCTCAGTAAC +
Preference number: 4 (lower is better)
Translates to: IPLRINTHLQHAGPRQVTLPAWL*GGKLSN
Trigger: GTTACTGAGCTTTCCTCCTCAGAGCCATGCTGGCAG...GGTGACCTGTCTGGGCCCAGCATGTTGCAGATGTGTATTTATGCGCAATGGTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR TCA 90 bp CCAGACTGCCTCTCAAGTTTTGCGGGGACAATAATGACAACTGGCATGACAATCTGGGAGATATCCCGCTaGGCAGAGGATGAGGGGTCA +
Preference number: 4 (lower is better)
Translates to: PDCLSSFAGTIMTTGMTIWEISR*AEDEGS
Trigger: TGACCCCTCATCCTCTGCTCAGCGGGATATCTCCCA...GATTGTCATGCCAGTTGTCATTATTGTCCCCGCAAAACTTGAGAGGCAGTCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000495957.1
CDS-3UTR GCA 90 bp ATCAACCCTTTGGATGCATTATTTCAGAAGAGATGGTTGGATCCAGCCAGCTTGCTTCACGCTCAGGCTTaGTTGCCAGCCGCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: INPLDALFQKRWLDPASLLHAQA*LPAAGS
Trigger: GCTCCCTGCGGCTGGCAAGCAAGCCTGAGCGTGAAG...CAAGCTGGCTGGATCCAACCATCTCTTCTGAAATAATGCATCCAAAGGGTTGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR GCA 90 bp ATGCATACCATTGCGCATAAATACACATCTGCAACATGCTGGGCCCAGACAGGTTCCATGGACTCCTGTTaGCCTGCTCCAAGGGGCACT +
Preference number: 4 (lower is better)
Translates to: MHTIAHKYTSATCWAQTGSMDSC*PAPRGT
Trigger: AGTGCCCCTTGGAGCAGGGCAACAGGAGTCCATGGA...ACCTGTCTGGGCCCAGCATGTTGCAGATGTGTATTTATGCGCAATGGTATGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR GCA 90 bp AAGAAACCAAGGTTCCTGACCAGACTGCTTAGAGGAGAAAGATTCAGCCCTCGACGGGGCAAGATTCCATaGAGAGGCAGCCAAAGCCAC +
Preference number: 4 (lower is better)
Translates to: KKPRFLTRLLRGERFSPRRGKIP*RGSQSH
Trigger: GTGGCTTTGGCTGCCTCTGCATGGAATCTTGCCCCG...TCGAGGGCTGAATCTTTCTCCTCTAAGCAGTCTGGTCAGGAACCTTGGTTTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR GCA 90 bp CATGACAATCTCAGCATCCTGGCTTATCAGTCTCCTCTCCGTGCCCTAACCTGGCCAGGACAAGTCGCCTaGTCCAAACAGGAATCAATC +
Preference number: 4 (lower is better)
Translates to: HDNLSILAYQSPLRALTWPGQVA*SKQESI
Trigger: GATTGATTCCTGTTTGGAGCAGGCGACTTGTCCTGG...CCAGGTTAGGGCACGGAGAGGAGACTGATAAGCCAGGATGCTGAGATTGTCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495957.1
CDS-3UTR GCA 90 bp CCTCCCAGACTGCCTCTCAAGTTTTGCGGGGACAATAATGACAACTGGCATGACCCCCACCCAGAACCCTaGCTCCTTATCTGTAAATGG +
Preference number: 4 (lower is better)
Translates to: PPRLPLKFCGDNNDNWHDPHPEP*LLICKW
Trigger: CCATTTACAGATAAGGAGGCAGGGTTCTGGGTGGGG...GTCATGCCAGTTGTCATTATTGTCCCCGCAAAACTTGAGAGGCAGTCTGGGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000495957.1
CDS-3UTR CCA 90 bp CCCAGAATATCAACCCTTTGGATGCATTATTTCAGAAGAGATGGTTGGATCCAGCCCCCAGCTTCTGGCTaGCCAGGAGTCGGCCTACCT +
Preference number: 4 (lower is better)
Translates to: PRISTLWMHYFRRDGWIQPPASG*PGVGLP
Trigger: AGGTAGGCCGACTCCTGGCCAGCCAGAAGCTGGGGG...CTGGATCCAACCATCTCTTCTGAAATAATGCATCCAAAGGGTTGATATTCTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR CCA 90 bp CCCCAGAATATCAACCCTTTGGATGCATTATTTCAGAAGAGATGGTTGGATCCAACCTCCCCCAGCTTCTaGCTGGCCAGGAGTCGGCCT +
Preference number: 4 (lower is better)
Translates to: PQNINPLDALFQKRWLDPTSPSF*LARSRP
Trigger: AGGCCGACTCCTGGCCAGCCAGAAGCTGGGGGAGGT...TGGATCCAACCATCTCTTCTGAAATAATGCATCCAAAGGGTTGATATTCTGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR CCA 90 bp CCCCCAGAATATCAACCCTTTGGATGCATTATTTCAGAAGAGATGGTTGGATCCTGGGAGGGTTGGCACTaGGCACCTCCACCTTTGGGG +
Preference number: 4 (lower is better)
Translates to: PPEYQPFGCIISEEMVGSWEGWH*APPPLG
Trigger: CCCCAAAGGTGGAGGTGCCCAGTGCCAACCCTCCCA...GGATCCAACCATCTCTTCTGAAATAATGCATCCAAAGGGTTGATATTCTGGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR CCA 90 bp CTCCCAGACTGCCTCTCAAGTTTTGCGGGGACAATAATGACAACTGGCATGACATGGCAAGTGGTACGTTaGCTCCACTGGGGTTTCTGG +
Preference number: 4 (lower is better)
Translates to: LPDCLSSFAGTIMTTGMTWQVVR*LHWGFW
Trigger: CCAGAAACCCCAGTGGAGCCAACGTACCACTTGCCA...TGTCATGCCAGTTGTCATTATTGTCCCCGCAAAACTTGAGAGGCAGTCTGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000495957.1
CDS-3UTR CCA 90 bp TGCATACCATTGCGCATAAATACACATCTGCAACATGCTGGGCCCAGACAGGTCTGGCAAGTGGTACGTTaGCTCCACTGGGGTTTCTGG +
Preference number: 4 (lower is better)
Translates to: CIPLRINTHLQHAGPRQVWQVVR*LHWGFW
Trigger: CCAGAAACCCCAGTGGAGCCAACGTACCACTTGCCA...GACCTGTCTGGGCCCAGCATGTTGCAGATGTGTATTTATGCGCAATGGTATGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR CCA 90 bp CACAGAGATATGCATACCATTGCGCATAAATACACATCTGCAACATGCTGGGCCCCCTGGACTCGATCCTaGGGTCAGAGCCATCAGGAG +
Preference number: 4 (lower is better)
Translates to: HRDMHTIAHKYTSATCWAPWTRS*GQSHQE
Trigger: CTCCTGATGGCTCTGACCCCAGGATCGAGTCCAGGG...GGCCCAGCATGTTGCAGATGTGTATTTATGCGCAATGGTATGCATATCTCTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000615223.2
CDS-3UTR CCA 90 bp CTTAGAGGAGAAAGATTCAGCCCTCGACTCAAGAGAGGAGGGCAGGCGTCAGCAAGTGAGTTCACATTGTaGAAGCCCAGGGATTTCTGG +
Preference number: 4 (lower is better)
Translates to: LRGERFSPRLKRGGQASASEFTL*KPRDFW
Trigger: CCAGAAATCCCTGGGCTTCCACAATGTGAACTCACT...TGCTGACGCCTGCCCTCCTCTCTTGAGTCGAGGGCTGAATCTTTCTCCTCTAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
CDS-3UTR CCA 90 bp GACTGCTTAGAGGAGAAAGATTCAGCCCTCGACTCAAGAGAGGAGGGCAGGCGTTCAGTAACTGCCCACTaGGGAATAAAGGTCAGTTCC +
Preference number: 4 (lower is better)
Translates to: DCLEEKDSALDSREEGRRSVTAH*GIKVSS
Trigger: GGAACTGACCTTTATTCCCCAGTGGGCAGTTACTGA...ACGCCTGCCCTCCTCTCTTGAGTCGAGGGCTGAATCTTTCTCCTCTAAGCAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
CDS-3UTR CCA 90 bp GCAGAGGGCGAGGAAGACTTCACAGCAAGTCCCCTCCACCCAGGGTCACCAGGTTCAGAAAGGTTGACTTaGGGTCTAAAAACTAGTACA +
Preference number: 4 (lower is better)
Translates to: AEGEEDFTASPLHPGSPGSERLT*GLKTST
Trigger: TGTACTAGTTTTTAGACCCCAAGTCAACCTTTCTGA...ACCTGGTGACCCTGGGTGGAGGGGACTTGCTGTGAAGTCTTCCTCGCCCTCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
CDS-3UTR CCA 90 bp GAGGAAAGCTCAGTAACTGCCCACTGGGGAATAAAGGTCAGTTCCATCCTTCTGCCCAGCGGGAAGCTGTaGCTCAGAAAGGTTGACTTG +
Preference number: 4 (lower is better)
Translates to: EESSVTAHWGIKVSSILLPSGKL*LRKVDL
Trigger: CAAGTCAACCTTTCTGAGCCACAGCTTCCCGCTGGG...CAGAAGGATGGAACTGACCTTTATTCCCCAGTGGGCAGTTACTGAGCTTTCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR TCA 90 bp ACTAGTACAGGCATCTGGTTTGAATTAAGACCTGTAAACGCTAGTACGGAGCAGCCCTGCCGACACCTCTaGACTTGTCACCTCTCTCCC +
Preference number: 4 (lower is better)
Translates to: TSTGIWFELRPVNASTEQPCRHL*TCHLSP
Trigger: GGGAGAGAGGTGACAAGTTCAGAGGTGTCGGCAGGG...CTGCTCCGTACTAGCGTTTACAGGTCTTAATTCAAACCAGATGCCTGTACTAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR TCA 90 bp ATCAACCCTTTGGATGCATTATTTCAGAAGAGATGGTTGGATCCAGCCAGCTTGTGCCATCTCCACTCCTaGGTCCCGGGAGGCCAGTTT +
Preference number: 4 (lower is better)
Translates to: INPLDALFQKRWLDPASLCHLHS*VPGGQF
Trigger: AAACTGGCCTCCCGGGACTCAGGAGTGGAGATGGCA...CAAGCTGGCTGGATCCAACCATCTCTTCTGAAATAATGCATCCAAAGGGTTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR TCA 90 bp CCCCCAGAATATCAACCCTTTGGATGCATTATTTCAGAAGAGATGGTTGGATCCTGCCATCTCCACTCCTaGGTCCCGGGAGGCCAGTTT +
Preference number: 4 (lower is better)
Translates to: PPEYQPFGCIISEEMVGSCHLHS*VPGGQF
Trigger: AAACTGGCCTCCCGGGACTCAGGAGTGGAGATGGCA...GGATCCAACCATCTCTTCTGAAATAATGCATCCAAAGGGTTGATATTCTGGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR TCA 90 bp AGTACAGGCATCTGGTTTGAATTAAGACCTGTAAACGCTAGTACGGAGCAGAGAAAGTCCAGGGAGTCCTaGGAAAGGCCCGGTAAGGCG +
Preference number: 4 (lower is better)
Translates to: STGIWFELRPVNASTEQRKSRES*ERPGKA
Trigger: CGCCTTACCGGGCCTTTCTCAGGACTCCCTGGACTT...TCTCTGCTCCGTACTAGCGTTTACAGGTCTTAATTCAAACCAGATGCCTGTACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR TCA 90 bp CCCCCAGAATATCAACCCTTTGGATGCATTATTTCAGAAGAGATGGTTGGATCCGGAGCGGTGTTGTCCTaGCAAGCTGGTGGGAGCTGT +
Preference number: 4 (lower is better)
Translates to: PPEYQPFGCIISEEMVGSGAVLS*QAGGSC
Trigger: ACAGCTCCCACCAGCTTGTCAGGACAACACCGCTCC...GGATCCAACCATCTCTTCTGAAATAATGCATCCAAAGGGTTGATATTCTGGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR TCA 90 bp GGGACAATAATGACAACTGGCATGACAATCTCAGCATCCTGGCTTATCAGTCTCCTCCACCTTTGGGGGTaGAGCAGCCTTTGCTCCTGT +
Preference number: 4 (lower is better)
Translates to: GTIMTTGMTISASWLISLLHLWG*SSLCSC
Trigger: ACAGGAGCAAAGGCTGCTTCACCCCCAAAGGTGGAG...GAGACTGATAAGCCAGGATGCTGAGATTGTCATGCCAGTTGTCATTATTGTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495957.1
CDS-3UTR TCA 90 bp GGCTCTGAGGAGGAAAGCTCAGTAACTGCCCACTGGGGAATAAAGGTCAGTTCCACACCTGACAATGAGTaGGTTCACATTGTGGAAGCC +
Preference number: 4 (lower is better)
Translates to: GSEEESSVTAHWGIKVSSTPDNE*VHIVEA
Trigger: GGCTTCCACAATGTGAACTCACTCATTGTCAGGTGT...GGAACTGACCTTTATTCCCCAGTGGGCAGTTACTGAGCTTTCCTCCTCAGAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR GCA 90 bp ATGCCAAAAACACTCCACGGACACCTGACAATGAGTGAGTTCACATTGTGGAAGTCCATGGACTCCTGTTaGCCTGCTCCAAGGGGCACT +
Preference number: 4 (lower is better)
Translates to: MPKTLHGHLTMSEFTLWKSMDSC*PAPRGT
Trigger: AGTGCCCCTTGGAGCAGGGCAACAGGAGTCCATGGA...CTTCCACAATGTGAACTCACTCATTGTCAGGTGTCCGTGGAGTGTTTTTGGCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR GCA 90 bp AGTACAGGCATCTGGTTTGAATTAAGACCTGTAAACGCTAGTACGGAGCAGAGATGGAGCCTTGCCATCTaGTCCAGCACCAGGCACAGG +
Preference number: 4 (lower is better)
Translates to: STGIWFELRPVNASTEQRWSLAI*SSTRHR
Trigger: CCTGTGCCTGGTGCTGGAGCAGATGGCAAGGCTCCA...TCTCTGCTCCGTACTAGCGTTTACAGGTCTTAATTCAAACCAGATGCCTGTACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR GCA 90 bp ACTAGTACAGGCATCTGGTTTGAATTAAGACCTGTAAACGCTAGTACGGAGCAGGAGCTGCTGGAGCCTTaGCATCTGCTCCAGCACCAG +
Preference number: 4 (lower is better)
Translates to: TSTGIWFELRPVNASTEQELLEP*HLLQHQ
Trigger: CTGGTGCTGGAGCAGATGGCAAGGCTCCAGCAGCTC...CTGCTCCGTACTAGCGTTTACAGGTCTTAATTCAAACCAGATGCCTGTACTAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR GCA 90 bp TATCAACCCTTTGGATGCATTATTTCAGAAGAGATGGTTGGATCCAGCCAGCTTCCCAGGGTCACCAGGTaGACCGAGAGGTCTCAGCCT +
Preference number: 4 (lower is better)
Translates to: YQPFGCIISEEMVGSSQLPRVTR*TERSQP
Trigger: AGGCTGAGACCTCTCGGTGCACCTGGTGACCCTGGG...AAGCTGGCTGGATCCAACCATCTCTTCTGAAATAATGCATCCAAAGGGTTGATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR GCA 90 bp CATACCATTGCGCATAAATACACATCTGCAACATGCTGGGCCCAGACAGGTCACCCAGACAGGTCACCATaGCAAAAACACTCCACGGAC +
Preference number: 4 (lower is better)
Translates to: HTIAHKYTSATCWAQTGHPDRSP*QKHSTD
Trigger: GTCCGTGGAGTGTTTTTGGCATGGTGACCTGTCTGG...GTGACCTGTCTGGGCCCAGCATGTTGCAGATGTGTATTTATGCGCAATGGTATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR GCA 90 bp TGCATACCATTGCGCATAAATACACATCTGCAACATGCTGGGCCCAGACAGGTCTACACATCTGCAACATaGTGGGCCCAGACAGGTCAC +
Preference number: 4 (lower is better)
Translates to: CIPLRINTHLQHAGPRQVYTSAT*WAQTGH
Trigger: GTGACCTGTCTGGGCCCAGCATGTTGCAGATGTGTA...GACCTGTCTGGGCCCAGCATGTTGCAGATGTGTATTTATGCGCAATGGTATGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR GCA 90 bp TTCCTCATTCCTTGTGCAGTCTTCAGGAGTCCGGGGCAAGATTCCATGCAGAGGGGAAAGCTCAGTAACTaGCCACTGGGGAATAAAGGT +
Preference number: 4 (lower is better)
Translates to: FLIPCAVFRSPGQDSMQRGKLSN*PLGNKG
Trigger: ACCTTTATTCCCCAGTGGGCAGTTACTGAGCTTTCC...CCTCTGCATGGAATCTTGCCCCGGACTCCTGAAGACTGCACAAGGAATGAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR GCA 90 bp ATACCATTGCGCATAAATACACATCTGCAACATGCTGGGCCCAGACAGGTCACCCTTCCTCATTCCTTGTaGAGTCTTCAGGAGTCCGGG +
Preference number: 4 (lower is better)
Translates to: IPLRINTHLQHAGPRQVTLPHSL*SLQESG
Trigger: CCCGGACTCCTGAAGACTGCACAAGGAATGAGGAAG...GGTGACCTGTCTGGGCCCAGCATGTTGCAGATGTGTATTTATGCGCAATGGTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR CCA 90 bp CAGAATATCAACCCTTTGGATGCATTATTTCAGAAGAGATGGTTGGATCCAGCCGTCCTGACAAGCTGGTaGGAGCTGTTGGGAGCCGGC +
Preference number: 4 (lower is better)
Translates to: QNINPLDALFQKRWLDPAVLTSW*ELLGAG
Trigger: GCCGGCTCCCAACAGCTCCCACCAGCTTGTCAGGAC...GGCTGGATCCAACCATCTCTTCTGAAATAATGCATCCAAAGGGTTGATATTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR CCA 90 bp ATATGCATACCATTGCGCATAAATACACATCTGCAACATGCTGGGCCCAGACAGCCTGTGTGCTCTGTCTaGCTTAGCAGCTCCCATGGC +
Preference number: 4 (lower is better)
Translates to: ICIPLRINTHLQHAGPRQPVCSV*LSSSHG
Trigger: GCCATGGGAGCTGCTAAGCCAGACAGAGCACACAGG...CTGTCTGGGCCCAGCATGTTGCAGATGTGTATTTATGCGCAATGGTATGCATAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR CCA 90 bp AATATCAACCCTTTGGATGCATTATTTCAGAAGAGATGGTTGGATCCAGCCAGCGGGTTTCTGGCAGCCTaGGAGGGTTGGCACTGGGCA +
Preference number: 4 (lower is better)
Translates to: NINPLDALFQKRWLDPASGFLAA*EGWHWA
Trigger: TGCCCAGTGCCAACCCTCCCAGGCTGCCAGAAACCC...GCTGGCTGGATCCAACCATCTCTTCTGAAATAATGCATCCAAAGGGTTGATATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR CCA 90 bp AAGAAACCAAGGTTCCTGACCAGACTGCTTAGAGGAGAAAGATTCAGCCCTCGATGGCAAGTGGTACGTTaGCTCCACTGGGGTTTCTGG +
Preference number: 4 (lower is better)
Translates to: KKPRFLTRLLRGERFSPRWQVVR*LHWGFW
Trigger: CCAGAAACCCCAGTGGAGCCAACGTACCACTTGCCA...TCGAGGGCTGAATCTTTCTCCTCTAAGCAGTCTGGTCAGGAACCTTGGTTTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR CCA 90 bp ATATGCATACCATTGCGCATAAATACACATCTGCAACATGCTGGGCCCAGACAGGGAGCTGCGGCATCTTaGGGGCCTCTCAAGAAACCA +
Preference number: 4 (lower is better)
Translates to: ICIPLRINTHLQHAGPRQGAAAS*GPLKKP
Trigger: TGGTTTCTTGAGAGGCCCCCAAGATGCCGCAGCTCC...CTGTCTGGGCCCAGCATGTTGCAGATGTGTATTTATGCGCAATGGTATGCATAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR CCA 90 bp CAGAATATCAACCCTTTGGATGCATTATTTCAGAAGAGATGGTTGGATCCAGCCGAGGAGGAAGAGCCCTaGAGCTGCGGCATCTTGGGG +
Preference number: 4 (lower is better)
Translates to: QNINPLDALFQKRWLDPAEEEEP*SCGILG
Trigger: CCCCAAGATGCCGCAGCTCCAGGGCTCTTCCTCCTC...GGCTGGATCCAACCATCTCTTCTGAAATAATGCATCCAAAGGGTTGATATTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR CCA 90 bp CTGACCAGACTGCTTAGAGGAGAAAGATTCAGCCCTCGACTCAAGAGAGGAGGGAGTGAGTTCACATTGTaGAAGCCCAGGGATTTCTGG +
Preference number: 4 (lower is better)
Translates to: LTRLLRGERFSPRLKRGGSEFTL*KPRDFW
Trigger: CCAGAAATCCCTGGGCTTCCACAATGTGAACTCACT...CCCTCCTCTCTTGAGTCGAGGGCTGAATCTTTCTCCTCTAAGCAGTCTGGTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
3UTR CAA 72 bp TTCAGTTCCCAGGTTGTCCCTGATCTTCCTCATTCCTaGTGCAGTCTTCAGGAGTCCGGGGCAAGATTCCAT +
Preference number: 4 (lower is better)
Translates to: FSSQVVPDLPHS*CSLQESGARFH
Trigger: ATGGAATCTTGCCCCGGACTCCTGAAGACTGCACAAGGAATGAGGAAGATCAGGGACAACCTGGGAACTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR TCA 90 bp CTCCCCCAGAATATCAACCCTTTGGATGCATTATTTCAGAAGAGATGGTTGGATGGAGCGGTGTTGTCCTaGCAAGCTGGTGGGAGCTGT +
Preference number: 4 (lower is better)
Translates to: LPQNINPLDALFQKRWLDGAVLS*QAGGSC
Trigger: ACAGCTCCCACCAGCTTGTCAGGACAACACCGCTCC...ATCCAACCATCTCTTCTGAAATAATGCATCCAAAGGGTTGATATTCTGGGGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR TCA 90 bp TATCAACCCTTTGGATGCATTATTTCAGAAGAGATGGTTGGATCCAGCCAGCTTGGAGCGGTGTTGTCCTaGCAAGCTGGTGGGAGCTGT +
Preference number: 4 (lower is better)
Translates to: YQPFGCIISEEMVGSSQLGAVLS*QAGGSC
Trigger: ACAGCTCCCACCAGCTTGTCAGGACAACACCGCTCC...AAGCTGGCTGGATCCAACCATCTCTTCTGAAATAATGCATCCAAAGGGTTGATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR TCA 90 bp GAGGAAAGCTCAGTAACTGCCCACTGGGGAATAAAGGTCAGTTCCATCCTTCTGAGAAACCAAGGTTCCTaGCCAGACTGCTTAGAGGAG +
Preference number: 4 (lower is better)
Translates to: EESSVTAHWGIKVSSILLRNQGS*PDCLEE
Trigger: CTCCTCTAAGCAGTCTGGTCAGGAACCTTGGTTTCT...CAGAAGGATGGAACTGACCTTTATTCCCCAGTGGGCAGTTACTGAGCTTTCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR TCA 90 bp TCCCCCAGAATATCAACCCTTTGGATGCATTATTTCAGAAGAGATGGTTGGATCCCCAGGGATTTCTGGTaGGGAGGAAGAGCCCTGGAG +
Preference number: 4 (lower is better)
Translates to: SPRISTLWMHYFRRDGWIPRDFW*GGRALE
Trigger: CTCCAGGGCTCTTCCTCCTCACCAGAAATCCCTGGG...GATCCAACCATCTCTTCTGAAATAATGCATCCAAAGGGTTGATATTCTGGGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR TCA 90 bp TATCAACCCTTTGGATGCATTATTTCAGAAGAGATGGTTGGATCCAGCCAGCTTCCCAGGGATTTCTGGTaGGGAGGAAGAGCCCTGGAG +
Preference number: 4 (lower is better)
Translates to: YQPFGCIISEEMVGSSQLPRDFW*GGRALE
Trigger: CTCCAGGGCTCTTCCTCCTCACCAGAAATCCCTGGG...AAGCTGGCTGGATCCAACCATCTCTTCTGAAATAATGCATCCAAAGGGTTGATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR TCA 90 bp TGCTGGGCCCAGACAGGTCACCATGCCAAAAACACTCCACGGACACCTGACAATTACAGGCATCTGGTTTaGATTAAGACCTGTAAACGC +
Preference number: 4 (lower is better)
Translates to: CWAQTGHHAKNTPRTPDNYRHLV*IKTCKR
Trigger: GCGTTTACAGGTCTTAATTCAAACCAGATGCCTGTA...ATTGTCAGGTGTCCGTGGAGTGTTTTTGGCATGGTGACCTGTCTGGGCCCAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR TCA 90 bp GACTGCTTAGAGGAGAAAGATTCAGCCCTCGACTCAAGAGAGGAGGGCAGGCGTTACAGGCATCTGGTTTaGATTAAGACCTGTAAACGC +
Preference number: 4 (lower is better)
Translates to: DCLEEKDSALDSREEGRRYRHLV*IKTCKR
Trigger: GCGTTTACAGGTCTTAATTCAAACCAGATGCCTGTA...ACGCCTGCCCTCCTCTCTTGAGTCGAGGGCTGAATCTTTCTCCTCTAAGCAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
CDS-3UTR GCA 90 bp CTCTCAAGTTTTGCGGGGACAATAATGACAACTGGCATGACAATCTCAGCATCCGCCTTTGCTCCTGTGTaGTCTGTCTGGCTTAGCAGC +
Preference number: 4 (lower is better)
Translates to: LSSFAGTIMTTGMTISASAFAPV*SVWLSS
Trigger: GCTGCTAAGCCAGACAGAGCACACAGGAGCAAAGGC...GGATGCTGAGATTGTCATGCCAGTTGTCATTATTGTCCCCGCAAAACTTGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495957.1
CDS-3UTR GCA 90 bp TCAACCCTTTGGATGCATTATTTCAGAAGAGATGGTTGGATCCAGCCAGCTTGCGCCTTTGCTCCTGTGTaGTCTGTCTGGCTTAGCAGC +
Preference number: 4 (lower is better)
Translates to: STLWMHYFRRDGWIQPACAFAPV*SVWLSS
Trigger: GCTGCTAAGCCAGACAGAGCACACAGGAGCAAAGGC...GCAAGCTGGCTGGATCCAACCATCTCTTCTGAAATAATGCATCCAAAGGGTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR GCA 90 bp TATCAACCCTTTGGATGCATTATTTCAGAAGAGATGGTTGGATCCAGCCAGCTTTCTCTGTCCCAGGGCTaGCAGCATGGCTCTGAGGAG +
Preference number: 4 (lower is better)
Translates to: YQPFGCIISEEMVGSSQLSLSQG*QHGSEE
Trigger: CTCCTCAGAGCCATGCTGGCAGCCCTGGGACAGAGA...AAGCTGGCTGGATCCAACCATCTCTTCTGAAATAATGCATCCAAAGGGTTGATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR GCA 90 bp CCCCCAGAATATCAACCCTTTGGATGCATTATTTCAGAAGAGATGGTTGGATCCCGGGGCAAGATTCCATaGAGAGGCAGCCAAAGCCAC +
Preference number: 4 (lower is better)
Translates to: PPEYQPFGCIISEEMVGSRGKIP*RGSQSH
Trigger: GTGGCTTTGGCTGCCTCTGCATGGAATCTTGCCCCG...GGATCCAACCATCTCTTCTGAAATAATGCATCCAAAGGGTTGATATTCTGGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR CCA 90 bp CCCCCAGAATATCAACCCTTTGGATGCATTATTTCAGAAGAGATGGTTGGATCCTTTCAGGGAGGTCCCTaGACTCGATCCTGGGGTCAG +
Preference number: 4 (lower is better)
Translates to: PPEYQPFGCIISEEMVGSFQGGP*TRSWGQ
Trigger: CTGACCCCAGGATCGAGTCCAGGGACCTCCCTGAAA...GGATCCAACCATCTCTTCTGAAATAATGCATCCAAAGGGTTGATATTCTGGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000615223.2
CDS-3UTR TCA 90 bp CTCCCCCAGAATATCAACCCTTTGGATGCATTATTTCAGAAGAGATGGTTGGATGTCTGTAGGTGCTGGTaGCTCCAGGCACTATGCAGC +
Preference number: 4 (lower is better)
Translates to: LPQNINPLDALFQKRWLDVCRCW*LQALCS
Trigger: GCTGCATAGTGCCTGGAGTCACCAGCACCTACAGAC...ATCCAACCATCTCTTCTGAAATAATGCATCCAAAGGGTTGATATTCTGGGGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
CDS-3UTR TCA 90 bp AGTCACACAGAGATATGCATACCATTGCGCATAAATACACATCTGCAACATGCTTGCCATCTCCACTCCTaGGTCCCGGGAGGCCAGTTT +
Preference number: 4 (lower is better)
Translates to: SHTEICIPLRINTHLQHACHLHS*VPGGQF
Trigger: AAACTGGCCTCCCGGGACTCAGGAGTGGAGATGGCA...AGCATGTTGCAGATGTGTATTTATGCGCAATGGTATGCATATCTCTGTGTGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR TCA 90 bp AATATCAACCCTTTGGATGCATTATTTCAGAAGAGATGGTTGGATCCAGCCAGCCTCCACCTTTGGGGGTaGAGCAGCCTTTGCTCCTGT +
Preference number: 4 (lower is better)
Translates to: NINPLDALFQKRWLDPASLHLWG*SSLCSC
Trigger: ACAGGAGCAAAGGCTGCTTCACCCCCAAAGGTGGAG...GCTGGCTGGATCCAACCATCTCTTCTGAAATAATGCATCCAAAGGGTTGATATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR TCA 90 bp AAGAAACCAAGGTTCCTGACCAGACTGCTTAGAGGAGAAAGATTCAGCCCTCGATCCATCCTTCTGCAGTaGCCTCCCCCAGAATATCAA +
Preference number: 4 (lower is better)
Translates to: KKPRFLTRLLRGERFSPRSILLQ*PPPEYQ
Trigger: TTGATATTCTGGGGGAGGTCACTGCAGAAGGATGGA...TCGAGGGCTGAATCTTTCTCCTCTAAGCAGTCTGGTCAGGAACCTTGGTTTCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR GCA 90 bp ATATGCATACCATTGCGCATAAATACACATCTGCAACATGCTGGGCCCAGACAGCAGTTTGAGAAAGAGTaGCTCCCTGCCGACACCTCT +
Preference number: 4 (lower is better)
Translates to: ICIPLRINTHLQHAGPRQQFEKE*LPADTS
Trigger: AGAGGTGTCGGCAGGGAGGCACTCTTTCTCAAACTG...CTGTCTGGGCCCAGCATGTTGCAGATGTGTATTTATGCGCAATGGTATGCATAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR GCA 90 bp ATGCCAAAAACACTCCACGGACACCTGACAATGAGTGAGTTCACATTGTGGAAGCCAGACAGGTCACCATaGCAAAAACACTCCACGGAC +
Preference number: 4 (lower is better)
Translates to: MPKTLHGHLTMSEFTLWKPDRSP*QKHSTD
Trigger: GTCCGTGGAGTGTTTTTGGCATGGTGACCTGTCTGG...CTTCCACAATGTGAACTCACTCATTGTCAGGTGTCCGTGGAGTGTTTTTGGCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR GCA 90 bp ATGCATACCATTGCGCATAAATACACATCTGCAACATGCTGGGCCCAGACAGGTTGGATCCAGCCAGCTTaGAACACTGACAGTCACACA +
Preference number: 4 (lower is better)
Translates to: MHTIAHKYTSATCWAQTGWIQPA*NTDSHT
Trigger: TGTGTGACTGTCAGTGTTGCAAGCTGGCTGGATCCA...ACCTGTCTGGGCCCAGCATGTTGCAGATGTGTATTTATGCGCAATGGTATGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR GCA 90 bp ATGCATACCATTGCGCATAAATACACATCTGCAACATGCTGGGCCCAGACAGGTTCAGTTCCATCCTTCTaGAGTGACCTCCCCCAGAAT +
Preference number: 4 (lower is better)
Translates to: MHTIAHKYTSATCWAQTGSVPSF*SDLPQN
Trigger: ATTCTGGGGGAGGTCACTGCAGAAGGATGGAACTGA...ACCTGTCTGGGCCCAGCATGTTGCAGATGTGTATTTATGCGCAATGGTATGCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR CCA 90 bp CCCCAGAATATCAACCCTTTGGATGCATTATTTCAGAAGAGATGGTTGGATCCACTGTGTCTGCCTCCATaGACTCCTGTTGCCCTGCTC +
Preference number: 4 (lower is better)
Translates to: PQNINPLDALFQKRWLDPLCLPP*TPVALL
Trigger: GAGCAGGGCAACAGGAGTCCATGGAGGCAGACACAG...TGGATCCAACCATCTCTTCTGAAATAATGCATCCAAAGGGTTGATATTCTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR CCA 90 bp TCCCCCAGAATATCAACCCTTTGGATGCATTATTTCAGAAGAGATGGTTGGATCTCCCGCTTGTGTCCCTaGGAGGATGGCAAGTGGTAC +
Preference number: 4 (lower is better)
Translates to: SPRISTLWMHYFRRDGWISRLCP*EDGKWY
Trigger: GTACCACTTGCCATCCTCCCAGGGACACAAGCGGGA...GATCCAACCATCTCTTCTGAAATAATGCATCCAAAGGGTTGATATTCTGGGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289989.10
ENST00000615223.2
CDS-3UTR CCA 90 bp CAGAATATCAACCCTTTGGATGCATTATTTCAGAAGAGATGGTTGGATCCAGCCTTTCAGGGAGGTCCCTaGACTCGATCCTGGGGTCAG +
Preference number: 4 (lower is better)
Translates to: QNINPLDALFQKRWLDPAFQGGP*TRSWGQ
Trigger: CTGACCCCAGGATCGAGTCCAGGGACCTCCCTGAAA...GGCTGGATCCAACCATCTCTTCTGAAATAATGCATCCAAAGGGTTGATATTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000615223.2
CDS-3UTR CCA 90 bp CATAAATACACATCTGCAACATGCTGGGCCCAGACAGGTCACCATGCCAAAAACCTTTTCCTGGCAATGTaGAGAAGCAGCAAGAGGGCA +
Preference number: 4 (lower is better)
Translates to: HKYTSATCWAQTGHHAKNLFLAM*RSSKRA
Trigger: TGCCCTCTTGCTGCTTCTCCACATTGCCAGGAAAAG...GTTTTTGGCATGGTGACCTGTCTGGGCCCAGCATGTTGCAGATGTGTATTTATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR CCA 90 bp TCCCCCAGAATATCAACCCTTTGGATGCATTATTTCAGAAGAGATGGTTGGATCGGAGCTGCGGCATCTTaGGGGCCTCTCAAGAAACCA +
Preference number: 4 (lower is better)
Translates to: SPRISTLWMHYFRRDGWIGAAAS*GPLKKP
Trigger: TGGTTTCTTGAGAGGCCCCCAAGATGCCGCAGCTCC...GATCCAACCATCTCTTCTGAAATAATGCATCCAAAGGGTTGATATTCTGGGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR CCA 90 bp ATGCCAAAAACACTCCACGGACACCTGACAATGAGTGAGTTCACATTGTGGAAGACATCTGCAACATGCTaGGCCCAGACAGGTCACCAT +
Preference number: 4 (lower is better)
Translates to: MPKTLHGHLTMSEFTLWKTSATC*AQTGHH
Trigger: ATGGTGACCTGTCTGGGCCCAGCATGTTGCAGATGT...CTTCCACAATGTGAACTCACTCATTGTCAGGTGTCCGTGGAGTGTTTTTGGCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR CCA 90 bp AGTACAGGCATCTGGTTTGAATTAAGACCTGTAAACGCTAGTACGGAGCAGAGACCCAGCGGGAAGCTGTaGCTCAGAAAGGTTGACTTG +
Preference number: 4 (lower is better)
Translates to: STGIWFELRPVNASTEQRPSGKL*LRKVDL
Trigger: CAAGTCAACCTTTCTGAGCCACAGCTTCCCGCTGGG...TCTCTGCTCCGTACTAGCGTTTACAGGTCTTAATTCAAACCAGATGCCTGTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR CCA 90 bp ATATGCATACCATTGCGCATAAATACACATCTGCAACATGCTGGGCCCAGACAGTTGACCTTGTGTCCCTaGGAGGATGGCAAGTGGTAC +
Preference number: 4 (lower is better)
Translates to: ICIPLRINTHLQHAGPRQLTLCP*EDGKWY
Trigger: GTACCACTTGCCATCCTCCCAGGGACACAAGGTCAA...CTGTCTGGGCCCAGCATGTTGCAGATGTGTATTTATGCGCAATGGTATGCATAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409586.7
CDS-3UTR CCA 90 bp GACAATAATGACAACTGGCATGACAATCTCAGCATCCTGGCTTATCAGTCTCCTCCTACCTTGTGTCCCTaGGAGGATGGCAAGTGGTAC +
Preference number: 4 (lower is better)
Translates to: DNNDNWHDNLSILAYQSPPTLCP*EDGKWY
Trigger: GTACCACTTGCCATCCTCCCAGGGACACAAGGTAGG...AGGAGACTGATAAGCCAGGATGCTGAGATTGTCATGCCAGTTGTCATTATTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495957.1
CDS-3UTR TCA 90 bp CATAAATACACATCTGCAACATGCTGGGCCCAGACAGGTCACCATGCCAAAAACGCTGAGCACTGGCTTTaGAAGTTATTCAGTTCCCAG +
Preference number: 4 (lower is better)
Translates to: HKYTSATCWAQTGHHAKNAEHWL*KLFSSQ
Trigger: CTGGGAACTGAATAACTTTCAAAGCCAGTGCTCAGC...GTTTTTGGCATGGTGACCTGTCTGGGCCCAGCATGTTGCAGATGTGTATTTATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR GCA 90 bp AATATCAACCCTTTGGATGCATTATTTCAGAAGAGATGGTTGGATCCAGCCAGCGCCTTTGCTCCTGTGTaGTCTGTCTGGCTTAGCAGC +
Preference number: 4 (lower is better)
Translates to: NINPLDALFQKRWLDPASAFAPV*SVWLSS
Trigger: GCTGCTAAGCCAGACAGAGCACACAGGAGCAAAGGC...GCTGGCTGGATCCAACCATCTCTTCTGAAATAATGCATCCAAAGGGTTGATATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR GCA 90 bp CCCCAGAATATCAACCCTTTGGATGCATTATTTCAGAAGAGATGGTTGGATCCAGCCTTTGCTCCTGTGTaGTCTGTCTGGCTTAGCAGC +
Preference number: 4 (lower is better)
Translates to: PQNINPLDALFQKRWLDPAFAPV*SVWLSS
Trigger: GCTGCTAAGCCAGACAGAGCACACAGGAGCAAAGGC...TGGATCCAACCATCTCTTCTGAAATAATGCATCCAAAGGGTTGATATTCTGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR GCA 90 bp ATCAACCCTTTGGATGCATTATTTCAGAAGAGATGGTTGGATCCAGCCAGCTTGCTTCCTCATTCCTTGTaGAGTCTTCAGGAGTCCGGG +
Preference number: 4 (lower is better)
Translates to: INPLDALFQKRWLDPASLLPHSL*SLQESG
Trigger: CCCGGACTCCTGAAGACTGCACAAGGAATGAGGAAG...CAAGCTGGCTGGATCCAACCATCTCTTCTGAAATAATGCATCCAAAGGGTTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR GCA 90 bp CTCTCAAGTTTTGCGGGGACAATAATGACAACTGGCATGACAATCTCAGCATCCGTCACTGACTCACCGTaGGGCTTTGGAAAAGCAACT +
Preference number: 4 (lower is better)
Translates to: LSSFAGTIMTTGMTISASVTDSP*GFGKAT
Trigger: AGTTGCTTTTCCAAAGCCGCACGGTGAGTCAGTGAC...GGATGCTGAGATTGTCATGCCAGTTGTCATTATTGTCCCCGCAAAACTTGAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000495957.1
CDS-3UTR CCA 90 bp AGTCACACAGAGATATGCATACCATTGCGCATAAATACACATCTGCAACATGCTGTGTCCCTGGGAGGATaGCAAGTGGTACGTTGGCTC +
Preference number: 4 (lower is better)
Translates to: SHTEICIPLRINTHLQHAVSLGG*QVVRWL
Trigger: GAGCCAACGTACCACTTGCCATCCTCCCAGGGACAC...AGCATGTTGCAGATGTGTATTTATGCGCAATGGTATGCATATCTCTGTGTGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR CCA 90 bp ATGCCAAAAACACTCCACGGACACCTGACAATGAGTGAGTTCACATTGTGGAAGTTGACCTTGTCCCAGTaGGAGATATCCCGCTTGTGT +
Preference number: 4 (lower is better)
Translates to: MPKTLHGHLTMSEFTLWKLTLSQ*EISRLC
Trigger: ACACAAGCGGGATATCTCCCACTGGGACAAGGTCAA...CTTCCACAATGTGAACTCACTCATTGTCAGGTGTCCGTGGAGTGTTTTTGGCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289989.10
ENST00000615223.2
CDS-3UTR CCA 90 bp CACAGAGATATGCATACCATTGCGCATAAATACACATCTGCAACATGCTGGGCCCTTTTCCTGGCAATGTaGAGAAGCAGCAAGAGGGCA +
Preference number: 4 (lower is better)
Translates to: HRDMHTIAHKYTSATCWALFLAM*RSSKRA
Trigger: TGCCCTCTTGCTGCTTCTCCACATTGCCAGGAAAAG...GGCCCAGCATGTTGCAGATGTGTATTTATGCGCAATGGTATGCATATCTCTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR CCA 90 bp CCCCAGAATATCAACCCTTTGGATGCATTATTTCAGAAGAGATGGTTGGATCCACCCAGCGGGAAGCTGTaGCTCAGAAAGGTTGACTTG +
Preference number: 4 (lower is better)
Translates to: PQNINPLDALFQKRWLDPPSGKL*LRKVDL
Trigger: CAAGTCAACCTTTCTGAGCCACAGCTTCCCGCTGGG...TGGATCCAACCATCTCTTCTGAAATAATGCATCCAAAGGGTTGATATTCTGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR TCA 90 bp CCCCCAGAATATCAACCCTTTGGATGCATTATTTCAGAAGAGATGGTTGGATCCTCCATCCTTCTGCAGTaGCCTCCCCCAGAATATCAA +
Preference number: 4 (lower is better)
Translates to: PPEYQPFGCIISEEMVGSSILLQ*PPPEYQ
Trigger: TTGATATTCTGGGGGAGGTCACTGCAGAAGGATGGA...GGATCCAACCATCTCTTCTGAAATAATGCATCCAAAGGGTTGATATTCTGGGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR TCA 90 bp AGTCACACAGAGATATGCATACCATTGCGCATAAATACACATCTGCAACATGCTCTGCCAGCATGGCTCTaGGGAGGAAAGCTCAGTAAC +
Preference number: 4 (lower is better)
Translates to: SHTEICIPLRINTHLQHALPAWL*GGKLSN
Trigger: GTTACTGAGCTTTCCTCCTCAGAGCCATGCTGGCAG...AGCATGTTGCAGATGTGTATTTATGCGCAATGGTATGCATATCTCTGTGTGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR GCA 90 bp TCCCCCAGAATATCAACCCTTTGGATGCATTATTTCAGAAGAGATGGTTGGATCCAGTTTGAGAAAGAGTaGCTCCCTGCCGACACCTCT +
Preference number: 4 (lower is better)
Translates to: SPRISTLWMHYFRRDGWIQFEKE*LPADTS
Trigger: AGAGGTGTCGGCAGGGAGGCACTCTTTCTCAAACTG...GATCCAACCATCTCTTCTGAAATAATGCATCCAAAGGGTTGATATTCTGGGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR GCA 90 bp CTCCCCCAGAATATCAACCCTTTGGATGCATTATTTCAGAAGAGATGGTTGGATCCAGACAGGTCACCATaGCAAAAACACTCCACGGAC +
Preference number: 4 (lower is better)
Translates to: LPQNINPLDALFQKRWLDPDRSP*QKHSTD
Trigger: GTCCGTGGAGTGTTTTTGGCATGGTGACCTGTCTGG...ATCCAACCATCTCTTCTGAAATAATGCATCCAAAGGGTTGATATTCTGGGGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR GCA 90 bp TCCCCCAGAATATCAACCCTTTGGATGCATTATTTCAGAAGAGATGGTTGGATCTACACATCTGCAACATaGTGGGCCCAGACAGGTCAC +
Preference number: 4 (lower is better)
Translates to: SPRISTLWMHYFRRDGWIYTSAT*WAQTGH
Trigger: GTGACCTGTCTGGGCCCAGCATGTTGCAGATGTGTA...GATCCAACCATCTCTTCTGAAATAATGCATCCAAAGGGTTGATATTCTGGGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR GCA 90 bp CAGAATATCAACCCTTTGGATGCATTATTTCAGAAGAGATGGTTGGATCCAGCCTACACATCTGCAACATaGTGGGCCCAGACAGGTCAC +
Preference number: 4 (lower is better)
Translates to: QNINPLDALFQKRWLDPAYTSAT*WAQTGH
Trigger: GTGACCTGTCTGGGCCCAGCATGTTGCAGATGTGTA...GGCTGGATCCAACCATCTCTTCTGAAATAATGCATCCAAAGGGTTGATATTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR GCA 90 bp TTCCTCATTCCTTGTGCAGTCTTCAGGAGTCCGGGGCAAGATTCCATGCAGAGGAGTCACACAGAGATATaGATACCATTGCGCATAAAT +
Preference number: 4 (lower is better)
Translates to: FLIPCAVFRSPGQDSMQRSHTEI*IPLRIN
Trigger: ATTTATGCGCAATGGTATGCATATCTCTGTGTGACT...CCTCTGCATGGAATCTTGCCCCGGACTCCTGAAGACTGCACAAGGAATGAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR GCA 90 bp CTTAGAGGAGAAAGATTCAGCCCTCGACTCAAGAGAGGAGGGCAGGCGTCAGCATATCAACCCTTTGGATaGATTATTTCAGAAGAGATG +
Preference number: 4 (lower is better)
Translates to: LRGERFSPRLKRGGQASAYQPFG*IISEEM
Trigger: CATCTCTTCTGAAATAATGCATCCAAAGGGTTGATA...TGCTGACGCCTGCCCTCCTCTCTTGAGTCGAGGGCTGAATCTTTCTCCTCTAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
CDS-3UTR GCA 90 bp ATGCCAAAAACACTCCACGGACACCTGACAATGAGTGAGTTCACATTGTGGAAGGGAAAGCTCAGTAACTaGCCACTGGGGAATAAAGGT +
Preference number: 4 (lower is better)
Translates to: MPKTLHGHLTMSEFTLWKGKLSN*PLGNKG
Trigger: ACCTTTATTCCCCAGTGGGCAGTTACTGAGCTTTCC...CTTCCACAATGTGAACTCACTCATTGTCAGGTGTCCGTGGAGTGTTTTTGGCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR GCA 90 bp TCCCCCAGAATATCAACCCTTTGGATGCATTATTTCAGAAGAGATGGTTGGATCCTTCCTCATTCCTTGTaGAGTCTTCAGGAGTCCGGG +
Preference number: 4 (lower is better)
Translates to: SPRISTLWMHYFRRDGWILPHSL*SLQESG
Trigger: CCCGGACTCCTGAAGACTGCACAAGGAATGAGGAAG...GATCCAACCATCTCTTCTGAAATAATGCATCCAAAGGGTTGATATTCTGGGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR CCA 90 bp ATCAACCCTTTGGATGCATTATTTCAGAAGAGATGGTTGGATCCAGCCAGCTTGTTGACCTTGTCCCAGTaGGAGATATCCCGCTTGTGT +
Preference number: 4 (lower is better)
Translates to: INPLDALFQKRWLDPASLLTLSQ*EISRLC
Trigger: ACACAAGCGGGATATCTCCCACTGGGACAAGGTCAA...CAAGCTGGCTGGATCCAACCATCTCTTCTGAAATAATGCATCCAAAGGGTTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289989.10
ENST00000615223.2
CDS-3UTR CCA 90 bp AGTACAGGCATCTGGTTTGAATTAAGACCTGTAAACGCTAGTACGGAGCAGAGACTTTTCCTGGCAATGTaGAGAAGCAGCAAGAGGGCA +
Preference number: 4 (lower is better)
Translates to: STGIWFELRPVNASTEQRLFLAM*RSSKRA
Trigger: TGCCCTCTTGCTGCTTCTCCACATTGCCAGGAAAAG...TCTCTGCTCCGTACTAGCGTTTACAGGTCTTAATTCAAACCAGATGCCTGTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR CCA 90 bp ACTAGTACAGGCATCTGGTTTGAATTAAGACCTGTAAACGCTAGTACGGAGCAGGTCAGCAGCTTTTCCTaGCAATGTGGAGAAGCAGCA +
Preference number: 4 (lower is better)
Translates to: TSTGIWFELRPVNASTEQVSSFS*QCGEAA
Trigger: TGCTGCTTCTCCACATTGCCAGGAAAAGCTGCTGAC...CTGCTCCGTACTAGCGTTTACAGGTCTTAATTCAAACCAGATGCCTGTACTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR CCA 90 bp TCAACCCTTTGGATGCATTATTTCAGAAGAGATGGTTGGATCCAGCCAGCTTGCTCAGTAACTGCCCACTaGGGAATAAAGGTCAGTTCC +
Preference number: 4 (lower is better)
Translates to: STLWMHYFRRDGWIQPACSVTAH*GIKVSS
Trigger: GGAACTGACCTTTATTCCCCAGTGGGCAGTTACTGA...GCAAGCTGGCTGGATCCAACCATCTCTTCTGAAATAATGCATCCAAAGGGTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR CCA 90 bp CTGACCAGACTGCTTAGAGGAGAAAGATTCAGCCCTCGACTCAAGAGAGGAGGGTCAGAAAGGTTGACTTaGGGTCTAAAAACTAGTACA +
Preference number: 4 (lower is better)
Translates to: LTRLLRGERFSPRLKRGGSERLT*GLKTST
Trigger: TGTACTAGTTTTTAGACCCCAAGTCAACCTTTCTGA...CCCTCCTCTCTTGAGTCGAGGGCTGAATCTTTCTCCTCTAAGCAGTCTGGTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR CCA 90 bp GGCTCTGAGGAGGAAAGCTCAGTAACTGCCCACTGGGGAATAAAGGTCAGTTCCTCAGAAAGGTTGACTTaGGGTCTAAAAACTAGTACA +
Preference number: 4 (lower is better)
Translates to: GSEEESSVTAHWGIKVSSSERLT*GLKTST
Trigger: TGTACTAGTTTTTAGACCCCAAGTCAACCTTTCTGA...GGAACTGACCTTTATTCCCCAGTGGGCAGTTACTGAGCTTTCCTCCTCAGAGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR CCA 90 bp CCTCTCAAGTTTTGCGGGGACAATAATGACAACTGGCATGACAATCTCAGCATCACAATCTCAGCATCCTaGCTTATCAGTCTCCTCTCC +
Preference number: 4 (lower is better)
Translates to: PLKFCGDNNDNWHDNLSITISAS*LISLLS
Trigger: GGAGAGGAGACTGATAAGCCAGGATGCTGAGATTGT...GATGCTGAGATTGTCATGCCAGTTGTCATTATTGTCCCCGCAAAACTTGAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495957.1
CDS-3UTR TCA 90 bp CCCAGAATATCAACCCTTTGGATGCATTATTTCAGAAGAGATGGTTGGATCCAGAGAAACCAAGGTTCCTaGCCAGACTGCTTAGAGGAG +
Preference number: 4 (lower is better)
Translates to: PRISTLWMHYFRRDGWIQRNQGS*PDCLEE
Trigger: CTCCTCTAAGCAGTCTGGTCAGGAACCTTGGTTTCT...CTGGATCCAACCATCTCTTCTGAAATAATGCATCCAAAGGGTTGATATTCTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR TCA 90 bp AGTACAGGCATCTGGTTTGAATTAAGACCTGTAAACGCTAGTACGGAGCAGAGAGCTGAGCACTGGCTTTaGAAGTTATTCAGTTCCCAG +
Preference number: 4 (lower is better)
Translates to: STGIWFELRPVNASTEQRAEHWL*KLFSSQ
Trigger: CTGGGAACTGAATAACTTTCAAAGCCAGTGCTCAGC...TCTCTGCTCCGTACTAGCGTTTACAGGTCTTAATTCAAACCAGATGCCTGTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR TCA 90 bp ACTAGTACAGGCATCTGGTTTGAATTAAGACCTGTAAACGCTAGTACGGAGCAGGCTGAGCACTGGCTTTaGAAGTTATTCAGTTCCCAG +
Preference number: 4 (lower is better)
Translates to: TSTGIWFELRPVNASTEQAEHWL*KLFSSQ
Trigger: CTGGGAACTGAATAACTTTCAAAGCCAGTGCTCAGC...CTGCTCCGTACTAGCGTTTACAGGTCTTAATTCAAACCAGATGCCTGTACTAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR GCA 90 bp CAGAATATCAACCCTTTGGATGCATTATTTCAGAAGAGATGGTTGGATCCAGCCTGGATCCAGCCAGCTTaGAACACTGACAGTCACACA +
Preference number: 4 (lower is better)
Translates to: QNINPLDALFQKRWLDPAWIQPA*NTDSHT
Trigger: TGTGTGACTGTCAGTGTTGCAAGCTGGCTGGATCCA...GGCTGGATCCAACCATCTCTTCTGAAATAATGCATCCAAAGGGTTGATATTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR GCA 90 bp CCCAGAATATCAACCCTTTGGATGCATTATTTCAGAAGAGATGGTTGGATCCAGTCAGTTCCATCCTTCTaGAGTGACCTCCCCCAGAAT +
Preference number: 4 (lower is better)
Translates to: PRISTLWMHYFRRDGWIQSVPSF*SDLPQN
Trigger: ATTCTGGGGGAGGTCACTGCAGAAGGATGGAACTGA...CTGGATCCAACCATCTCTTCTGAAATAATGCATCCAAAGGGTTGATATTCTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR GCA 90 bp ATCAACCCTTTGGATGCATTATTTCAGAAGAGATGGTTGGATCCAGCCAGCTTGGGAAAGCTCAGTAACTaGCCACTGGGGAATAAAGGT +
Preference number: 4 (lower is better)
Translates to: INPLDALFQKRWLDPASLGKLSN*PLGNKG
Trigger: ACCTTTATTCCCCAGTGGGCAGTTACTGAGCTTTCC...CAAGCTGGCTGGATCCAACCATCTCTTCTGAAATAATGCATCCAAAGGGTTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR GCA 90 bp TTTGCGGGGACAATAATGACAACTGGCATGACAATCTCAGCATCCTGGCTTATCCTGCCTCTCAAGTTTTaGGGGGACAATAATGACAAC +
Preference number: 4 (lower is better)
Translates to: FAGTIMTTGMTISASWLILPLKF*GDNNDN
Trigger: GTTGTCATTATTGTCCCCGCAAAACTTGAGAGGCAG...GATAAGCCAGGATGCTGAGATTGTCATGCCAGTTGTCATTATTGTCCCCGCAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000495957.1
CDS-3UTR CCA 90 bp TATCAACCCTTTGGATGCATTATTTCAGAAGAGATGGTTGGATCCAGCCAGCTTCTTTTCCTGGCAATGTaGAGAAGCAGCAAGAGGGCA +
Preference number: 4 (lower is better)
Translates to: YQPFGCIISEEMVGSSQLLFLAM*RSSKRA
Trigger: TGCCCTCTTGCTGCTTCTCCACATTGCCAGGAAAAG...AAGCTGGCTGGATCCAACCATCTCTTCTGAAATAATGCATCCAAAGGGTTGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR CCA 90 bp CCCCAGAATATCAACCCTTTGGATGCATTATTTCAGAAGAGATGGTTGGATCCAGTCAGCAGCTTTTCCTaGCAATGTGGAGAAGCAGCA +
Preference number: 4 (lower is better)
Translates to: PQNINPLDALFQKRWLDPVSSFS*QCGEAA
Trigger: TGCTGCTTCTCCACATTGCCAGGAAAAGCTGCTGAC...TGGATCCAACCATCTCTTCTGAAATAATGCATCCAAAGGGTTGATATTCTGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR TCA 90 bp CTCCCCCAGAATATCAACCCTTTGGATGCATTATTTCAGAAGAGATGGTTGGATACACCTGACAATGAGTaGGTTCACATTGTGGAAGCC +
Preference number: 4 (lower is better)
Translates to: LPQNINPLDALFQKRWLDTPDNE*VHIVEA
Trigger: GGCTTCCACAATGTGAACTCACTCATTGTCAGGTGT...ATCCAACCATCTCTTCTGAAATAATGCATCCAAAGGGTTGATATTCTGGGGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR TCA 90 bp CCCCAGAATATCAACCCTTTGGATGCATTATTTCAGAAGAGATGGTTGGATCCAGCTGAGCACTGGCTTTaGAAGTTATTCAGTTCCCAG +
Preference number: 4 (lower is better)
Translates to: PQNINPLDALFQKRWLDPAEHWL*KLFSSQ
Trigger: CTGGGAACTGAATAACTTTCAAAGCCAGTGCTCAGC...TGGATCCAACCATCTCTTCTGAAATAATGCATCCAAAGGGTTGATATTCTGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR GCA 90 bp GAGGAAAGCTCAGTAACTGCCCACTGGGGAATAAAGGTCAGTTCCATCCTTCTGAGTCACACAGAGATATaGATACCATTGCGCATAAAT +
Preference number: 4 (lower is better)
Translates to: EESSVTAHWGIKVSSILLSHTEI*IPLRIN
Trigger: ATTTATGCGCAATGGTATGCATATCTCTGTGTGACT...CAGAAGGATGGAACTGACCTTTATTCCCCAGTGGGCAGTTACTGAGCTTTCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR GCA 90 bp AGTCACACAGAGATATGCATACCATTGCGCATAAATACACATCTGCAACATGCTTCAGTTCCATCCTTCTaGAGTGACCTCCCCCAGAAT +
Preference number: 4 (lower is better)
Translates to: SHTEICIPLRINTHLQHASVPSF*SDLPQN
Trigger: ATTCTGGGGGAGGTCACTGCAGAAGGATGGAACTGA...AGCATGTTGCAGATGTGTATTTATGCGCAATGGTATGCATATCTCTGTGTGACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR GCA 90 bp TATCAACCCTTTGGATGCATTATTTCAGAAGAGATGGTTGGATCCAGCCAGCTTGGAAAGCTCAGTAACTaGCCACTGGGGAATAAAGGT +
Preference number: 4 (lower is better)
Translates to: YQPFGCIISEEMVGSSQLGKLSN*PLGNKG
Trigger: ACCTTTATTCCCCAGTGGGCAGTTACTGAGCTTTCC...AAGCTGGCTGGATCCAACCATCTCTTCTGAAATAATGCATCCAAAGGGTTGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR CCA 90 bp CCAGACTGCCTCTCAAGTTTTGCGGGGACAATAATGACAACTGGCATGACAATCGACAATAATGACAACTaGCATGACAATCTCAGCATC +
Preference number: 4 (lower is better)
Translates to: PDCLSSFAGTIMTTGMTIDNNDN*HDNLSI
Trigger: GATGCTGAGATTGTCATGCCAGTTGTCATTATTGTC...GATTGTCATGCCAGTTGTCATTATTGTCCCCGCAAAACTTGAGAGGCAGTCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495957.1
CDS-3UTR GCA 90 bp TGCATACCATTGCGCATAAATACACATCTGCAACATGCTGGGCCCAGACAGGTCTATCAACCCTTTGGATaGATTATTTCAGAAGAGATG +
Preference number: 4 (lower is better)
Translates to: CIPLRINTHLQHAGPRQVYQPFG*IISEEM
Trigger: CATCTCTTCTGAAATAATGCATCCAAAGGGTTGATA...GACCTGTCTGGGCCCAGCATGTTGCAGATGTGTATTTATGCGCAATGGTATGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR CCA 90 bp TCAACCCTTTGGATGCATTATTTCAGAAGAGATGGTTGGATCCAGCCAGCTTGCTCAGAAAGGTTGACTTaGGGTCTAAAAACTAGTACA +
Preference number: 4 (lower is better)
Translates to: STLWMHYFRRDGWIQPACSERLT*GLKTST
Trigger: TGTACTAGTTTTTAGACCCCAAGTCAACCTTTCTGA...GCAAGCTGGCTGGATCCAACCATCTCTTCTGAAATAATGCATCCAAAGGGTTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR GCA 90 bp CACAGAGATATGCATACCATTGCGCATAAATACACATCTGCAACATGCTGGGCCTATCAACCCTTTGGATaGATTATTTCAGAAGAGATG +
Preference number: 4 (lower is better)
Translates to: HRDMHTIAHKYTSATCWAYQPFG*IISEEM
Trigger: CATCTCTTCTGAAATAATGCATCCAAAGGGTTGATA...GGCCCAGCATGTTGCAGATGTGTATTTATGCGCAATGGTATGCATATCTCTGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR GCA 90 bp AGTCACACAGAGATATGCATACCATTGCGCATAAATACACATCTGCAACATGCTCCTACAGAAAGGTTTTaGTCGTTGCTTCTTAACCAC +
Preference number: 4 (lower is better)
Translates to: SHTEICIPLRINTHLQHAPTERF*SLLLNH
Trigger: GTGGTTAAGAAGCAACGAGCAAAACCTTTCTGTAGG...AGCATGTTGCAGATGTGTATTTATGCGCAATGGTATGCATATCTCTGTGTGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615223.2
CDS-3UTR GCA 90 bp CAGAATATCAACCCTTTGGATGCATTATTTCAGAAGAGATGGTTGGATCCAGCCAGTCACACAGAGATATaGATACCATTGCGCATAAAT +
Preference number: 4 (lower is better)
Translates to: QNINPLDALFQKRWLDPASHTEI*IPLRIN
Trigger: ATTTATGCGCAATGGTATGCATATCTCTGTGTGACT...GGCTGGATCCAACCATCTCTTCTGAAATAATGCATCCAAAGGGTTGATATTCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR GCA 90 bp ATCAACCCTTTGGATGCATTATTTCAGAAGAGATGGTTGGATCCAGCCAGCTTGTATCAACCCTTTGGATaGATTATTTCAGAAGAGATG +
Preference number: 4 (lower is better)
Translates to: INPLDALFQKRWLDPASLYQPFG*IISEEM
Trigger: CATCTCTTCTGAAATAATGCATCCAAAGGGTTGATA...CAAGCTGGCTGGATCCAACCATCTCTTCTGAAATAATGCATCCAAAGGGTTGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR GCA 90 bp AGTCACACAGAGATATGCATACCATTGCGCATAAATACACATCTGCAACATGCTAGTCACACAGAGATATaGATACCATTGCGCATAAAT +
Preference number: 4 (lower is better)
Translates to: SHTEICIPLRINTHLQHASHTEI*IPLRIN
Trigger: ATTTATGCGCAATGGTATGCATATCTCTGTGTGACT...AGCATGTTGCAGATGTGTATTTATGCGCAATGGTATGCATATCTCTGTGTGACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR GCA 90 bp CTCCCCCAGAATATCAACCCTTTGGATGCATTATTTCAGAAGAGATGGTTGGATAAAGGTTTTGCTCGTTaGTTCTTAACCACTAATGAT +
Preference number: 4 (lower is better)
Translates to: LPQNINPLDALFQKRWLDKGFAR*FLTTND
Trigger: ATCATTAGTGGTTAAGAAGCAACGAGCAAAACCTTT...ATCCAACCATCTCTTCTGAAATAATGCATCCAAAGGGTTGATATTCTGGGGGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000615223.2
CDS CCA 90 bp AGGAGGTCACTGGGTGGGAGAGGGGTCCGCAGCCACGGAGGGGGCTaGGGCGCGGGCGGATTCCCACATCCTCAGAAGGAGCGGGAAGGC +
Preference number: 5 (lower is better)
Translates to: RRSLGGRGVRSHGGG*GAGGFPHPQKEREG
Trigger: GCCTTCCCGCTCCTTCTGAGGATGTGGGAATCCGCCCGCGCCCCAGCCCCCTCCGTGGCTGCGGACCCCTCTCCCACCCAGTGACCTCCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000453427.2
CDS TCA 90 bp ATGAGCACCCGTGGGCAGCGTCGGGGATCCGTCTGTAGGTGCTGGTaGCTCCAGGCACTATGCAGCCCCGTGCCAGGCCCTCGCCAGCCC +
Preference number: 5 (lower is better)
Translates to: MSTRGQRRGSVCRCW*LQALCSPVPGPRQP
Trigger: GGGCTGGCGAGGGCCTGGCACGGGGCTGCATAGTGCCTGGAGTCACCAGCACCTACAGACGGATCCCCGACGCTGCCCACGGGTGCTCAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000453427.2
ENST00000614574.4
CDS CCA 90 bp GCTTGCTTGCCAGCCGCAGGGAGCGGTGTTGTCCTGACAAGCTGGTaGGAGCTGTTGGGAGCCGGCGGGACCGCTCCAACACCTCCCCCA +
Preference number: 5 (lower is better)
Translates to: ACLPAAGSGVVLTSW*ELLGAGGTAPTPPP
Trigger: TGGGGGAGGTGTTGGAGCGGTCCCGCCGGCTCCCAACAGCTCCCACCAGCTTGTCAGGACAACACCGCTCCCTGCGGCTGGCAAGCAAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS CCA 90 bp CAGGCTTGCTTGCCAGCCGCAGGGAGCGGTGTTGTCCTGACAAGCTaGTGGGAGCTGTTGGGAGCCGGCGGGACCGCTCCAACACCTCCC +
Preference number: 5 (lower is better)
Translates to: QACLPAAGSGVVLTS*WELLGAGGTAPTPP
Trigger: GGGAGGTGTTGGAGCGGTCCCGCCGGCTCCCAACAGCTCCCACCAGCTTGTCAGGACAACACCGCTCCCTGCGGCTGGCAAGCAAGCCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS TCA 90 bp TTCACGCTCAGGCTTGCTTGCCAGCCGCAGGGAGCGGTGTTGTCCTaGCAAGCTGGTGGGAGCTGTTGGGAGCCGGCGGGACCGCTCCAA +
Preference number: 5 (lower is better)
Translates to: FTLRLACQPQGAVLS*QAGGSCWEPAGPLQ
Trigger: TTGGAGCGGTCCCGCCGGCTCCCAACAGCTCCCACCAGCTTGTCAGGACAACACCGCTCCCTGCGGCTGGCAAGCAAGCCTGAGCGTGAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR CAA 90 bp GGCAGAGGGCGAGGAAGACTTCACAGCAAGTCCCCTCCACCCAGGGTCACCAGGACTTCACGCTCAGGCTaGCTTGCCAGCCGCAGGGAG +
Preference number: 5 (lower is better)
Translates to: GRGRGRLHSKSPPPRVTRTSRSG*LASRRE
Trigger: CTCCCTGCGGCTGGCAAGCAAGCCTGAGCGTGAAGT...CCTGGTGACCCTGGGTGGAGGGGACTTGCTGTGAAGTCTTCCTCGCCCTCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
CDS TCA 90 bp TGCCTCCCTGCCGACACCTCTGAACTTGTCACCTCTCTCCCAGGATaGGCACCCGTGGGCAGCGTCGGGGATCCGTCTGTAGGTGCTGGT +
Preference number: 5 (lower is better)
Translates to: CLPADTSELVTSLPG*APVGSVGDPSVGAG
Trigger: ACCAGCACCTACAGACGGATCCCCGACGCTGCCCACGGGTGCTCATCCTGGGAGAGAGGTGACAAGTTCAGAGGTGTCGGCAGGGAGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000453427.2
ENST00000614574.4
CDS GCA 90 bp TGGACTCCTGTTGCCCTGCTCCAAGGGGCACTTCACGCTCAGGCTTaGTTGCCAGCCGCAGGGAGCGGTGTTGTCCTGACAAGCTGGTGG +
Preference number: 5 (lower is better)
Translates to: WTPVALLQGALHAQA*LPAAGSGVVLTSWW
Trigger: CCACCAGCTTGTCAGGACAACACCGCTCCCTGCGGCTGGCAAGCAAGCCTGAGCGTGAAGTGCCCCTTGGAGCAGGGCAACAGGAGTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR CAA 90 bp GCAGAGGGCGAGGAAGACTTCACAGCAAGTCCCCTCCACCCAGGGTCACCAGGTACTTCACGCTCAGGCTaGCTTGCCAGCCGCAGGGAG +
Preference number: 5 (lower is better)
Translates to: AEGEEDFTASPLHPGSPGTSRSG*LASRRE
Trigger: CTCCCTGCGGCTGGCAAGCAAGCCTGAGCGTGAAGT...ACCTGGTGACCCTGGGTGGAGGGGACTTGCTGTGAAGTCTTCCTCGCCCTCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
CDS-3UTR CAA 90 bp GGCAGAGGGCGAGGAAGACTTCACAGCAAGTCCCCTCCACCCAGGGTCACCAGGAGAGCTGCTGGAGCCTaGCCATCTGCTCCAGCACCA +
Preference number: 5 (lower is better)
Translates to: GRGRGRLHSKSPPPRVTRRAAGA*PSAPAP
Trigger: TGGTGCTGGAGCAGATGGCAAGGCTCCAGCAGCTCT...CCTGGTGACCCTGGGTGGAGGGGACTTGCTGTGAAGTCTTCCTCGCCCTCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
CDS CCA 90 bp CCGCCTCTTCTTCCAGGCCTGCCTCTAGGTCTGTGTCTGCCTCCATaGACTCCTGTTGCCCTGCTCCAAGGGGCACTTCACGCTCAGGCT +
Preference number: 5 (lower is better)
Translates to: PPLLPGLPLGLCLPP*TPVALLQGALHAQA
Trigger: AGCCTGAGCGTGAAGTGCCCCTTGGAGCAGGGCAACAGGAGTCCATGGAGGCAGACACAGACCTAGAGGCAGGCCTGGAAGAAGAGGCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS CCA 90 bp AATCTCAGCATCCTGGCTTATCAGTCTCCTCTCCGTGCCCTAACCTaGGCTGGGCACGGGGCTCACCTGGGGTCAGAGCCATCAGGAGGG +
Preference number: 5 (lower is better)
Translates to: NLSILAYQSPLRALT*AGHGAHLGSEPSGG
Trigger: CCCTCCTGATGGCTCTGACCCCAGGTGAGCCCCGTGCCCAGCCCAGGTTAGGGCACGGAGAGGAGACTGATAAGCCAGGATGCTGAGATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495957.1
CDS TCA 90 bp TGGCAGCCTGGGAGGGTTGGCACTGGGCACCTCCACCTTTGGGGGTaGAGCAGCCTTTGCTCCTTCAGAAAGACAGTCAGGTTGGCCAGG +
Preference number: 5 (lower is better)
Translates to: WQPGRVGTGHLHLWG*SSLCSFRKTVRLAR
Trigger: CCTGGCCAACCTGACTGTCTTTCTGAAGGAGCAAAGGCTGCTTCACCCCCAAAGGTGGAGGTGCCCAGTGCCAACCCTCCCAGGCTGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475994.1
CDS-3UTR CAA 90 bp GCAGAGGGCGAGGAAGACTTCACAGCAAGTCCCCTCCACCCAGGGTCACCAGGTCCGACACCTCTGAACTaGTCACCTCTCTCCCAGGAT +
Preference number: 5 (lower is better)
Translates to: AEGEEDFTASPLHPGSPGPTPLN*SPLSQD
Trigger: ATCCTGGGAGAGAGGTGACAAGTTCAGAGGTGTCGG...ACCTGGTGACCCTGGGTGGAGGGGACTTGCTGTGAAGTCTTCCTCGCCCTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
CDS TCA 90 bp TTAACCACTAATGATGGCATAAAGGTCTTCCGGTGGGGGCGGCACTaGGGCCTTTCAGGGAGGTCCCTGGACTCGATCCTGGGGTCAGAG +
Preference number: 5 (lower is better)
Translates to: LTTNDGIKVFRWGRH*GLSGRSLDSILGSE
Trigger: CTCTGACCCCAGGATCGAGTCCAGGGACCTCCCTGAAAGGCCTCAGTGCCGCCCCCACCGGAAGACCTTTATGCCATCATTAGTGGTTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000615223.2
CDS-3UTR CAA 90 bp TGCTTAGAGGAGAAAGATTCAGCCCTCGACTCAAGAGAGGAGGGCAGGCGTCAGTCCCGGGAGGCCAGTTaGAGAAAGAGTGCCTCCCTG +
Preference number: 5 (lower is better)
Translates to: CLEEKDSALDSREEGRRQSREAS*RKSASL
Trigger: CAGGGAGGCACTCTTTCTCAAACTGGCCTCCCGGGA...CTGACGCCTGCCCTCCTCTCTTGAGTCGAGGGCTGAATCTTTCTCCTCTAAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
CDS-3UTR CAA 90 bp GGCTCTGAGGAGGAAAGCTCAGTAACTGCCCACTGGGGAATAAAGGTCAGTTCCACTTCACGCTCAGGCTaGCTTGCCAGCCGCAGGGAG +
Preference number: 5 (lower is better)
Translates to: GSEEESSVTAHWGIKVSSTSRSG*LASRRE
Trigger: CTCCCTGCGGCTGGCAAGCAAGCCTGAGCGTGAAGT...GGAACTGACCTTTATTCCCCAGTGGGCAGTTACTGAGCTTTCCTCCTCAGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR CAA 90 bp CAACATGCTGGGCCCAGACAGGTCACCATGCCAAAAACACTCCACGGACACCTGGGGGTGAAGCAGCCTTaGCTCCTGTGTGCTCTGTCT +
Preference number: 5 (lower is better)
Translates to: QHAGPRQVTMPKTLHGHLGVKQP*LLCALS
Trigger: AGACAGAGCACACAGGAGCAAAGGCTGCTTCACCCC...CAGGTGTCCGTGGAGTGTTTTTGGCATGGTGACCTGTCTGGGCCCAGCATGTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR CAA 90 bp GTGCAGTCTTCAGGAGTCCGGGGCAAGATTCCATGCAGAGGCAGCCAAAGCCACATGGCAAGTGGTACGTaGGCTCCACTGGGGTTTCTG +
Preference number: 5 (lower is better)
Translates to: VQSSGVRGKIPCRGSQSHMASGT*APLGFL
Trigger: CAGAAACCCCAGTGGAGCCAACGTACCACTTGCCAT...GTGGCTTTGGCTGCCTCTGCATGGAATCTTGCCCCGGACTCCTGAAGACTGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS TCA 90 bp TTAACCACTAATGATGGCATAAAGGTCTTCCGGTGGGGGCGGCACTaGGGCCTTTCAGGGAGGTCCCTGGACTCGATCCTTGTGTCCCTG +
Preference number: 5 (lower is better)
Translates to: LTTNDGIKVFRWGRH*GLSGRSLDSILVSL
Trigger: CAGGGACACAAGGATCGAGTCCAGGGACCTCCCTGAAAGGCCTCAGTGCCGCCCCCACCGGAAGACCTTTATGCCATCATTAGTGGTTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000614574.4
CDS GCA 90 bp CCAAGCTCCCAGAGACAGCTGTCGCCACAGCCAGGACAAGTCGCCTaGTCCAAACAGGAATCAATCCTGTCATTTCCCCAGAGTTGCTGG +
Preference number: 5 (lower is better)
Translates to: PSSQRQLSPQPGQVA*SKQESILSFPQSCW
Trigger: CCAGCAACTCTGGGGAAATGACAGGATTGATTCCTGTTTGGAGCAGGCGACTTGTCCTGGCTGTGGCGACAGCTGTCTCTGGGAGCTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495957.1
CDS GCA 90 bp CGAGGAAGACTTCACAGCAAGTCCCCTCCACCCAGGGTCACCAGGTaGACCGAGAGGTCTCAGCCTACAGAAAGGTTTTGCTCGTTGCTT +
Preference number: 5 (lower is better)
Translates to: RGRLHSKSPPPRVTR*TERSQPTERFCSLL
Trigger: AAGCAACGAGCAAAACCTTTCTGTAGGCTGAGACCTCTCGGTGCACCTGGTGACCCTGGGTGGAGGGGACTTGCTGTGAAGTCTTCCTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615223.2
CDS CCA 90 bp TTTGGGGGTGAAGCAGCCTTTGCTCCTTCAGAAAGACAGTCAGGTTaGCCAGGGCCAGAAGACACCCCATCAAGCTTCGGCTCAGAGGAC +
Preference number: 5 (lower is better)
Translates to: FGGEAAFAPSERQSG*PGPEDTPSSFGSED
Trigger: GTCCTCTGAGCCGAAGCTTGATGGGGTGTCTTCTGGCCCTGGCCAACCTGACTGTCTTTCTGAAGGAGCAAAGGCTGCTTCACCCCCAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475994.1
CDS-3UTR CAA 90 bp GGCTCTGAGGAGGAAAGCTCAGTAACTGCCCACTGGGGAATAAAGGTCAGTTCCTGGGAGATATCCCGCTaGTGTCCCTGGGAGGATGGC +
Preference number: 5 (lower is better)
Translates to: GSEEESSVTAHWGIKVSSWEISR*CPWEDG
Trigger: GCCATCCTCCCAGGGACACAAGCGGGATATCTCCCA...GGAACTGACCTTTATTCCCCAGTGGGCAGTTACTGAGCTTTCCTCCTCAGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289989.10
ENST00000615223.2
CDS-3UTR CAA 90 bp GCAACATGCTGGGCCCAGACAGGTCACCATGCCAAAAACACTCCACGGACACCTAGCAGGACCTTGACCTaGTCCCAGTGGGAGATATCC +
Preference number: 5 (lower is better)
Translates to: ATCWAQTGHHAKNTPRTPSRTLT*SQWEIS
Trigger: GGATATCTCCCACTGGGACAAGGTCAAGGTCCTGCT...AGGTGTCCGTGGAGTGTTTTTGGCATGGTGACCTGTCTGGGCCCAGCATGTTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289989.10
ENST00000615223.2
CDS-3UTR CAA 90 bp AGCCCAGGGATTTCTGGTGAGGAGGAAGAGCCCTGGAGCTGCGGCATCTTGGGGATGAGTGAGTTCACATaGTGGAAGCCCAGGGATTTC +
Preference number: 5 (lower is better)
Translates to: SPGISGEEEEPWSCGILGMSEFT*WKPRDF
Trigger: GAAATCCCTGGGCTTCCACAATGTGAACTCACTCAT...CCCCAAGATGCCGCAGCTCCAGGGCTCTTCCTCCTCACCAGAAATCCCTGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR CAA 90 bp GCCCAGGGATTTCTGGTGAGGAGGAAGAGCCCTGGAGCTGCGGCATCTTGGGGGTATTCAGTTCCCAGGTaGTCCCTGATCTTCCTCATT +
Preference number: 5 (lower is better)
Translates to: AQGFLVRRKSPGAAASWGYSVPR*SLIFLI
Trigger: AATGAGGAAGATCAGGGACAACCTGGGAACTGAATA...CCCCCAAGATGCCGCAGCTCCAGGGCTCTTCCTCCTCACCAGAAATCCCTGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR CAA 90 bp CTGACCAGACTGCTTAGAGGAGAAAGATTCAGCCCTCGACTCAAGAGAGGAGGGGGGGTGAAGCAGCCTTaGCTCCTGTGTGCTCTGTCT +
Preference number: 5 (lower is better)
Translates to: LTRLLRGERFSPRLKRGGGVKQP*LLCALS
Trigger: AGACAGAGCACACAGGAGCAAAGGCTGCTTCACCCC...CCCTCCTCTCTTGAGTCGAGGGCTGAATCTTTCTCCTCTAAGCAGTCTGGTCAG
56% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR CAA 90 bp ATACCATTGCGCATAAATACACATCTGCAACATGCTGGGCCCAGACAGGTCACCCCCTGGACTCGATCCTaGTGTCCCTGGGAGGATGGC +
Preference number: 5 (lower is better)
Translates to: IPLRINTHLQHAGPRQVTPWTRS*CPWEDG
Trigger: GCCATCCTCCCAGGGACACAAGGATCGAGTCCAGGG...GGTGACCTGTCTGGGCCCAGCATGTTGCAGATGTGTATTTATGCGCAATGGTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000614574.4
CDS-3UTR CAA 90 bp GGCTCTGAGGAGGAAAGCTCAGTAACTGCCCACTGGGGAATAAAGGTCAGTTCCCCGACACCTCTGAACTaGTCACCTCTCTCCCAGGAT +
Preference number: 5 (lower is better)
Translates to: GSEEESSVTAHWGIKVSSPTPLN*SPLSQD
Trigger: ATCCTGGGAGAGAGGTGACAAGTTCAGAGGTGTCGG...GGAACTGACCTTTATTCCCCAGTGGGCAGTTACTGAGCTTTCCTCCTCAGAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR CAA 90 bp GAGGAAAGCTCAGTAACTGCCCACTGGGGAATAAAGGTCAGTTCCATCCTTCTGAGAGCTGCTGGAGCCTaGCCATCTGCTCCAGCACCA +
Preference number: 5 (lower is better)
Translates to: EESSVTAHWGIKVSSILLRAAGA*PSAPAP
Trigger: TGGTGCTGGAGCAGATGGCAAGGCTCCAGCAGCTCT...CAGAAGGATGGAACTGACCTTTATTCCCCAGTGGGCAGTTACTGAGCTTTCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR CAA 90 bp ATACCATTGCGCATAAATACACATCTGCAACATGCTGGGCCCAGACAGGTCACCCGGTTGAGCAGGACCTaGACCTTGTCCCAGTGGGAG +
Preference number: 5 (lower is better)
Translates to: IPLRINTHLQHAGPRQVTRLSRT*TLSQWE
Trigger: CTCCCACTGGGACAAGGTCAAGGTCCTGCTCAACCG...GGTGACCTGTCTGGGCCCAGCATGTTGCAGATGTGTATTTATGCGCAATGGTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289989.10
ENST00000615223.2
CDS-3UTR CAA 90 bp ATGCCAAAAACACTCCACGGACACCTGACAATGAGTGAGTTCACATTGTGGAAGACTTCACGCTCAGGCTaGCTTGCCAGCCGCAGGGAG +
Preference number: 5 (lower is better)
Translates to: MPKTLHGHLTMSEFTLWKTSRSG*LASRRE
Trigger: CTCCCTGCGGCTGGCAAGCAAGCCTGAGCGTGAAGT...CTTCCACAATGTGAACTCACTCATTGTCAGGTGTCCGTGGAGTGTTTTTGGCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR CAA 90 bp ATGCCAAAAACACTCCACGGACACCTGACAATGAGTGAGTTCACATTGTGGAAGCTCCATGGACTCCTGTaGCCCTGCTCCAAGGGGCAC +
Preference number: 5 (lower is better)
Translates to: MPKTLHGHLTMSEFTLWKLHGLL*PCSKGH
Trigger: GTGCCCCTTGGAGCAGGGCAACAGGAGTCCATGGAG...CTTCCACAATGTGAACTCACTCATTGTCAGGTGTCCGTGGAGTGTTTTTGGCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR CAA 90 bp CACAGAGATATGCATACCATTGCGCATAAATACACATCTGCAACATGCTGGGCCCTCCATGGACTCCTGTaGCCCTGCTCCAAGGGGCAC +
Preference number: 5 (lower is better)
Translates to: HRDMHTIAHKYTSATCWALHGLL*PCSKGH
Trigger: GTGCCCCTTGGAGCAGGGCAACAGGAGTCCATGGAG...GGCCCAGCATGTTGCAGATGTGTATTTATGCGCAATGGTATGCATATCTCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR CAA 90 bp CCTCCCAGACTGCCTCTCAAGTTTTGCGGGGACAATAATGACAACTGGCATGACAGCAGGACCTTGACCTaGTCCCAGTGGGAGATATCC +
Preference number: 5 (lower is better)
Translates to: PPRLPLKFCGDNNDNWHDSRTLT*SQWEIS
Trigger: GGATATCTCCCACTGGGACAAGGTCAAGGTCCTGCT...GTCATGCCAGTTGTCATTATTGTCCCCGCAAAACTTGAGAGGCAGTCTGGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495957.1
CDS-3UTR CAA 90 bp AAGAAACCAAGGTTCCTGACCAGACTGCTTAGAGGAGAAAGATTCAGCCCTCGACTCCGGCAGATCCGGTaGAGCAGGACCTTGACCTTG +
Preference number: 5 (lower is better)
Translates to: KKPRFLTRLLRGERFSPRLRQIR*SRTLTL
Trigger: CAAGGTCAAGGTCCTGCTCAACCGGATCTGCCGGAG...TCGAGGGCTGAATCTTTCTCCTCTAAGCAGTCTGGTCAGGAACCTTGGTTTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000615223.2
CDS-3UTR CAA 90 bp GCCCAGGGATTTCTGGTGAGGAGGAAGAGCCCTGGAGCTGCGGCATCTTGGGGGCAGAATATCAACCCTTaGGATGCATTATTTCAGAAG +
Preference number: 5 (lower is better)
Translates to: AQGFLVRRKSPGAAASWGQNINP*DALFQK
Trigger: CTTCTGAAATAATGCATCCAAAGGGTTGATATTCTG...CCCCCAAGATGCCGCAGCTCCAGGGCTCTTCCTCCTCACCAGAAATCCCTGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR CAA 90 bp CATAAATACACATCTGCAACATGCTGGGCCCAGACAGGTCACCATGCCAAAAACAGCAGGACCTTGACCTaGTGTCCCTGGGAGGATGGC +
Preference number: 5 (lower is better)
Translates to: HKYTSATCWAQTGHHAKNSRTLT*CPWEDG
Trigger: GCCATCCTCCCAGGGACACAAGGTCAAGGTCCTGCT...GTTTTTGGCATGGTGACCTGTCTGGGCCCAGCATGTTGCAGATGTGTATTTATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409586.7
CDS-3UTR CAA 90 bp CTGCCTCTCAAGTTTTGCGGGGACAATAATGACAACTGGCATGACAATCTCAGCTACCTGTCCCCTACCTaGTGTCCCTGGGAGGATGGC +
Preference number: 5 (lower is better)
Translates to: LPLKFCGDNNDNWHDNLSYLSPT*CPWEDG
Trigger: GCCATCCTCCCAGGGACACAAGGTAGGGGACAGGTA...GCTGAGATTGTCATGCCAGTTGTCATTATTGTCCCCGCAAAACTTGAGAGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000495957.1
CDS GCA 90 bp CCAGGTGCACCGAGAGGTCTCAGCCTACAGAAAGGTTTTGCTCGTTaGTTCTTAACCACTAATGATGGCATAAAGGTCTTCCGGTGGGGG +
Preference number: 5 (lower is better)
Translates to: PGAPRGLSLQKGFAR*FLTTNDGIKVFRWG
Trigger: CCCCCACCGGAAGACCTTTATGCCATCATTAGTGGTTAAGAAGCAACGAGCAAAACCTTTCTGTAGGCTGAGACCTCTCGGTGCACCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615223.2
CDS-3UTR CAA 90 bp ATATGCATACCATTGCGCATAAATACACATCTGCAACATGCTGGGCCCAGACAGAGAGCTGCTGGAGCCTaGCCATCTGCTCCAGCACCA +
Preference number: 5 (lower is better)
Translates to: ICIPLRINTHLQHAGPRQRAAGA*PSAPAP
Trigger: TGGTGCTGGAGCAGATGGCAAGGCTCCAGCAGCTCT...CTGTCTGGGCCCAGCATGTTGCAGATGTGTATTTATGCGCAATGGTATGCATAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR CAA 90 bp CTCTCAAGTTTTGCGGGGACAATAATGACAACTGGCATGACAATCTCAGCATCCCGGTTGAGCAGGACCTaGACCTTGTCCCAGTGGGAG +
Preference number: 5 (lower is better)
Translates to: LSSFAGTIMTTGMTISASRLSRT*TLSQWE
Trigger: CTCCCACTGGGACAAGGTCAAGGTCCTGCTCAACCG...GGATGCTGAGATTGTCATGCCAGTTGTCATTATTGTCCCCGCAAAACTTGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495957.1
CDS-3UTR CAA 90 bp TCAACCCTTTGGATGCATTATTTCAGAAGAGATGGTTGGATCCAGCCAGCTTGCCTCCGGCAGATCCGGTaGAGCAGGACCTTGACCTTG +
Preference number: 5 (lower is better)
Translates to: STLWMHYFRRDGWIQPACLRQIR*SRTLTL
Trigger: CAAGGTCAAGGTCCTGCTCAACCGGATCTGCCGGAG...GCAAGCTGGCTGGATCCAACCATCTCTTCTGAAATAATGCATCCAAAGGGTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000615223.2
CDS-3UTR CAA 90 bp TGCCTCTCAAGTTTTGCGGGGACAATAATGACAACTGGCATGACAATCTCAGCACTCCGGCAGATCCGGTaGAGCAGGACCTTGACCTTG +
Preference number: 5 (lower is better)
Translates to: CLSSFAGTIMTTGMTISALRQIR*SRTLTL
Trigger: CAAGGTCAAGGTCCTGCTCAACCGGATCTGCCGGAG...TGCTGAGATTGTCATGCCAGTTGTCATTATTGTCCCCGCAAAACTTGAGAGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495957.1
CDS-3UTR CAA 90 bp GCAACATGCTGGGCCCAGACAGGTCACCATGCCAAAAACACTCCACGGACACCTTATTCAGTTCCCAGGTaGTCCCTGATCTTCCTCATT +
Preference number: 5 (lower is better)
Translates to: ATCWAQTGHHAKNTPRTPYSVPR*SLIFLI
Trigger: AATGAGGAAGATCAGGGACAACCTGGGAACTGAATA...AGGTGTCCGTGGAGTGTTTTTGGCATGGTGACCTGTCTGGGCCCAGCATGTTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR CAA 90 bp TATCAACCCTTTGGATGCATTATTTCAGAAGAGATGGTTGGATCCAGCCAGCTTCTCCATGGACTCCTGTaGCCCTGCTCCAAGGGGCAC +
Preference number: 5 (lower is better)
Translates to: YQPFGCIISEEMVGSSQLLHGLL*PCSKGH
Trigger: GTGCCCCTTGGAGCAGGGCAACAGGAGTCCATGGAG...AAGCTGGCTGGATCCAACCATCTCTTCTGAAATAATGCATCCAAAGGGTTGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR CAA 90 bp ATCAACCCTTTGGATGCATTATTTCAGAAGAGATGGTTGGATCCAGCCAGCTTGAGAGCTGCTGGAGCCTaGCCATCTGCTCCAGCACCA +
Preference number: 5 (lower is better)
Translates to: INPLDALFQKRWLDPASLRAAGA*PSAPAP
Trigger: TGGTGCTGGAGCAGATGGCAAGGCTCCAGCAGCTCT...CAAGCTGGCTGGATCCAACCATCTCTTCTGAAATAATGCATCCAAAGGGTTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR CAA 90 bp TCAACCCTTTGGATGCATTATTTCAGAAGAGATGGTTGGATCCAGCCAGCTTGCGGGGTGAAGCAGCCTTaGCTCCTGTGTGCTCTGTCT +
Preference number: 5 (lower is better)
Translates to: STLWMHYFRRDGWIQPACGVKQP*LLCALS
Trigger: AGACAGAGCACACAGGAGCAAAGGCTGCTTCACCCC...GCAAGCTGGCTGGATCCAACCATCTCTTCTGAAATAATGCATCCAAAGGGTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR CAA 90 bp CCTCTCAAGTTTTGCGGGGACAATAATGACAACTGGCATGACAATCTCAGCATCGGGGTGAAGCAGCCTTaGCTCCTGTGTGCTCTGTCT +
Preference number: 5 (lower is better)
Translates to: PLKFCGDNNDNWHDNLSIGVKQP*LLCALS
Trigger: AGACAGAGCACACAGGAGCAAAGGCTGCTTCACCCC...GATGCTGAGATTGTCATGCCAGTTGTCATTATTGTCCCCGCAAAACTTGAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000495957.1
CDS-3UTR CAA 90 bp AAGAAACCAAGGTTCCTGACCAGACTGCTTAGAGGAGAAAGATTCAGCCCTCGAATGGCAAGTGGTACGTaGGCTCCACTGGGGTTTCTG +
Preference number: 5 (lower is better)
Translates to: KKPRFLTRLLRGERFSPRMASGT*APLGFL
Trigger: CAGAAACCCCAGTGGAGCCAACGTACCACTTGCCAT...TCGAGGGCTGAATCTTTCTCCTCTAAGCAGTCTGGTCAGGAACCTTGGTTTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR CAA 90 bp AGTACAGGCATCTGGTTTGAATTAAGACCTGTAAACGCTAGTACGGAGCAGAGATGGGAGATATCCCGCTaGTGTCCCTGGGAGGATGGC +
Preference number: 5 (lower is better)
Translates to: STGIWFELRPVNASTEQRWEISR*CPWEDG
Trigger: GCCATCCTCCCAGGGACACAAGCGGGATATCTCCCA...TCTCTGCTCCGTACTAGCGTTTACAGGTCTTAATTCAAACCAGATGCCTGTACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289989.10
ENST00000615223.2
CDS-3UTR CAA 90 bp TTTGCGGGGACAATAATGACAACTGGCATGACAATCTCAGCATCCTGGCTTATCATGGCAAGTGGTACGTaGGCTCCACTGGGGTTTCTG +
Preference number: 5 (lower is better)
Translates to: FAGTIMTTGMTISASWLIMASGT*APLGFL
Trigger: CAGAAACCCCAGTGGAGCCAACGTACCACTTGCCAT...GATAAGCCAGGATGCTGAGATTGTCATGCCAGTTGTCATTATTGTCCCCGCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495957.1
CDS-3UTR CAA 90 bp TCCCCCAGAATATCAACCCTTTGGATGCATTATTTCAGAAGAGATGGTTGGATCCGGTTGAGCAGGACCTaGACCTTGTCCCAGTGGGAG +
Preference number: 5 (lower is better)
Translates to: SPRISTLWMHYFRRDGWIRLSRT*TLSQWE
Trigger: CTCCCACTGGGACAAGGTCAAGGTCCTGCTCAACCG...GATCCAACCATCTCTTCTGAAATAATGCATCCAAAGGGTTGATATTCTGGGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289989.10
ENST00000615223.2
CDS-3UTR CAA 90 bp TCCCCCAGAATATCAACCCTTTGGATGCATTATTTCAGAAGAGATGGTTGGATCCTCCGGCAGATCCGGTaGAGCAGGACCTTGACCTTG +
Preference number: 5 (lower is better)
Translates to: SPRISTLWMHYFRRDGWILRQIR*SRTLTL
Trigger: CAAGGTCAAGGTCCTGCTCAACCGGATCTGCCGGAG...GATCCAACCATCTCTTCTGAAATAATGCATCCAAAGGGTTGATATTCTGGGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000615223.2
CDS-3UTR CAA 90 bp CATACCATTGCGCATAAATACACATCTGCAACATGCTGGGCCCAGACAGGTCACGATCTTCCTCATTCCTaGTGCAGTCTTCAGGAGTCC +
Preference number: 5 (lower is better)
Translates to: HTIAHKYTSATCWAQTGHDLPHS*CSLQES
Trigger: GGACTCCTGAAGACTGCACAAGGAATGAGGAAGATC...GTGACCTGTCTGGGCCCAGCATGTTGCAGATGTGTATTTATGCGCAATGGTATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR CAA 90 bp CCCCAGAATATCAACCCTTTGGATGCATTATTTCAGAAGAGATGGTTGGATCCACGGTTGAGCAGGACCTaGACCTTGTGTCCCTGGGAG +
Preference number: 5 (lower is better)
Translates to: PQNINPLDALFQKRWLDPRLSRT*TLCPWE
Trigger: CTCCCAGGGACACAAGGTCAAGGTCCTGCTCAACCG...TGGATCCAACCATCTCTTCTGAAATAATGCATCCAAAGGGTTGATATTCTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409586.7
CDS-3UTR CAA 90 bp AATATCAACCCTTTGGATGCATTATTTCAGAAGAGATGGTTGGATCCAGCCAGCGGGGTGAAGCAGCCTTaGCTCCTGTGTGCTCTGTCT +
Preference number: 5 (lower is better)
Translates to: NINPLDALFQKRWLDPASGVKQP*LLCALS
Trigger: AGACAGAGCACACAGGAGCAAAGGCTGCTTCACCCC...GCTGGCTGGATCCAACCATCTCTTCTGAAATAATGCATCCAAAGGGTTGATATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR CAA 90 bp ACTAGTACAGGCATCTGGTTTGAATTAAGACCTGTAAACGCTAGTACGGAGCAGATGGCAAGTGGTACGTaGGCTCCACTGGGGTTTCTG +
Preference number: 5 (lower is better)
Translates to: TSTGIWFELRPVNASTEQMASGT*APLGFL
Trigger: CAGAAACCCCAGTGGAGCCAACGTACCACTTGCCAT...CTGCTCCGTACTAGCGTTTACAGGTCTTAATTCAAACCAGATGCCTGTACTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR CAA 90 bp CATACCATTGCGCATAAATACACATCTGCAACATGCTGGGCCCAGACAGGTCACATGAGTGAGTTCACATaGTGGAAGCCCAGGGATTTC +
Preference number: 5 (lower is better)
Translates to: HTIAHKYTSATCWAQTGHMSEFT*WKPRDF
Trigger: GAAATCCCTGGGCTTCCACAATGTGAACTCACTCAT...GTGACCTGTCTGGGCCCAGCATGTTGCAGATGTGTATTTATGCGCAATGGTATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR CAA 90 bp GACTGCTTAGAGGAGAAAGATTCAGCCCTCGACTCAAGAGAGGAGGGCAGGCGTGAGATATGCATACCATaGCGCATAAATACACATCTG +
Preference number: 5 (lower is better)
Translates to: DCLEEKDSALDSREEGRREICIP*RINTHL
Trigger: CAGATGTGTATTTATGCGCAATGGTATGCATATCTC...ACGCCTGCCCTCCTCTCTTGAGTCGAGGGCTGAATCTTTCTCCTCTAAGCAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
CDS-3UTR CAA 90 bp GCAACATGCTGGGCCCAGACAGGTCACCATGCCAAAAACACTCCACGGACACCTCAGAATATCAACCCTTaGGATGCATTATTTCAGAAG +
Preference number: 5 (lower is better)
Translates to: ATCWAQTGHHAKNTPRTPQNINP*DALFQK
Trigger: CTTCTGAAATAATGCATCCAAAGGGTTGATATTCTG...AGGTGTCCGTGGAGTGTTTTTGGCATGGTGACCTGTCTGGGCCCAGCATGTTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR CAA 90 bp TATCAACCCTTTGGATGCATTATTTCAGAAGAGATGGTTGGATCCAGCCAGCTTCCGACACCTCTGAACTaGTCACCTCTCTCCCAGGAT +
Preference number: 5 (lower is better)
Translates to: YQPFGCIISEEMVGSSQLPTPLN*SPLSQD
Trigger: ATCCTGGGAGAGAGGTGACAAGTTCAGAGGTGTCGG...AAGCTGGCTGGATCCAACCATCTCTTCTGAAATAATGCATCCAAAGGGTTGATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR CAA 90 bp CTCCCCCAGAATATCAACCCTTTGGATGCATTATTTCAGAAGAGATGGTTGGATCCGACACCTCTGAACTaGTCACCTCTCTCCCAGGAT +
Preference number: 5 (lower is better)
Translates to: LPQNINPLDALFQKRWLDPTPLN*SPLSQD
Trigger: ATCCTGGGAGAGAGGTGACAAGTTCAGAGGTGTCGG...ATCCAACCATCTCTTCTGAAATAATGCATCCAAAGGGTTGATATTCTGGGGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR CAA 90 bp AGTCACACAGAGATATGCATACCATTGCGCATAAATACACATCTGCAACATGCTATGGCAAGTGGTACGTaGGCTCCACTGGGGTTTCTG +
Preference number: 5 (lower is better)
Translates to: SHTEICIPLRINTHLQHAMASGT*APLGFL
Trigger: CAGAAACCCCAGTGGAGCCAACGTACCACTTGCCAT...AGCATGTTGCAGATGTGTATTTATGCGCAATGGTATGCATATCTCTGTGTGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR CAA 90 bp ACTAGTACAGGCATCTGGTTTGAATTAAGACCTGTAAACGCTAGTACGGAGCAGGATCTTCCTCATTCCTaGTGCAGTCTTCAGGAGTCC +
Preference number: 5 (lower is better)
Translates to: TSTGIWFELRPVNASTEQDLPHS*CSLQES
Trigger: GGACTCCTGAAGACTGCACAAGGAATGAGGAAGATC...CTGCTCCGTACTAGCGTTTACAGGTCTTAATTCAAACCAGATGCCTGTACTAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR CAA 90 bp ACTAGTACAGGCATCTGGTTTGAATTAAGACCTGTAAACGCTAGTACGGAGCAGATGAGTGAGTTCACATaGTGGAAGCCCAGGGATTTC +
Preference number: 5 (lower is better)
Translates to: TSTGIWFELRPVNASTEQMSEFT*WKPRDF
Trigger: GAAATCCCTGGGCTTCCACAATGTGAACTCACTCAT...CTGCTCCGTACTAGCGTTTACAGGTCTTAATTCAAACCAGATGCCTGTACTAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR CAA 90 bp CATACCATTGCGCATAAATACACATCTGCAACATGCTGGGCCCAGACAGGTCACGAGATATGCATACCATaGCGCATAAATACACATCTG +
Preference number: 5 (lower is better)
Translates to: HTIAHKYTSATCWAQTGHEICIP*RINTHL
Trigger: CAGATGTGTATTTATGCGCAATGGTATGCATATCTC...GTGACCTGTCTGGGCCCAGCATGTTGCAGATGTGTATTTATGCGCAATGGTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR CAA 90 bp TATCAACCCTTTGGATGCATTATTTCAGAAGAGATGGTTGGATCCAGCCAGCTTGATCTTCCTCATTCCTaGTGCAGTCTTCAGGAGTCC +
Preference number: 5 (lower is better)
Translates to: YQPFGCIISEEMVGSSQLDLPHS*CSLQES
Trigger: GGACTCCTGAAGACTGCACAAGGAATGAGGAAGATC...AAGCTGGCTGGATCCAACCATCTCTTCTGAAATAATGCATCCAAAGGGTTGATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR CAA 90 bp TCAACCCTTTGGATGCATTATTTCAGAAGAGATGGTTGGATCCAGCCAGCTTGCTATTCAGTTCCCAGGTaGTCCCTGATCTTCCTCATT +
Preference number: 5 (lower is better)
Translates to: STLWMHYFRRDGWIQPACYSVPR*SLIFLI
Trigger: AATGAGGAAGATCAGGGACAACCTGGGAACTGAATA...GCAAGCTGGCTGGATCCAACCATCTCTTCTGAAATAATGCATCCAAAGGGTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR CAA 90 bp AGTCACACAGAGATATGCATACCATTGCGCATAAATACACATCTGCAACATGCTGATCTTCCTCATTCCTaGTGCAGTCTTCAGGAGTCC +
Preference number: 5 (lower is better)
Translates to: SHTEICIPLRINTHLQHADLPHS*CSLQES
Trigger: GGACTCCTGAAGACTGCACAAGGAATGAGGAAGATC...AGCATGTTGCAGATGTGTATTTATGCGCAATGGTATGCATATCTCTGTGTGACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR CAA 90 bp CCCCAGAATATCAACCCTTTGGATGCATTATTTCAGAAGAGATGGTTGGATCCATATTCAGTTCCCAGGTaGTCCCTGATCTTCCTCATT +
Preference number: 5 (lower is better)
Translates to: PQNINPLDALFQKRWLDPYSVPR*SLIFLI
Trigger: AATGAGGAAGATCAGGGACAACCTGGGAACTGAATA...TGGATCCAACCATCTCTTCTGAAATAATGCATCCAAAGGGTTGATATTCTGGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR CAA 90 bp AGTACAGGCATCTGGTTTGAATTAAGACCTGTAAACGCTAGTACGGAGCAGAGAGAGATATGCATACCATaGCGCATAAATACACATCTG +
Preference number: 5 (lower is better)
Translates to: STGIWFELRPVNASTEQREICIP*RINTHL
Trigger: CAGATGTGTATTTATGCGCAATGGTATGCATATCTC...TCTCTGCTCCGTACTAGCGTTTACAGGTCTTAATTCAAACCAGATGCCTGTACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR CAA 90 bp CACAGAGATATGCATACCATTGCGCATAAATACACATCTGCAACATGCTGGGCCCAGAATATCAACCCTTaGGATGCATTATTTCAGAAG +
Preference number: 5 (lower is better)
Translates to: HRDMHTIAHKYTSATCWAQNINP*DALFQK
Trigger: CTTCTGAAATAATGCATCCAAAGGGTTGATATTCTG...GGCCCAGCATGTTGCAGATGTGTATTTATGCGCAATGGTATGCATATCTCTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR CAA 90 bp CAGAATATCAACCCTTTGGATGCATTATTTCAGAAGAGATGGTTGGATCCAGCCGAGATATGCATACCATaGCGCATAAATACACATCTG +
Preference number: 5 (lower is better)
Translates to: QNINPLDALFQKRWLDPAEICIP*RINTHL
Trigger: CAGATGTGTATTTATGCGCAATGGTATGCATATCTC...GGCTGGATCCAACCATCTCTTCTGAAATAATGCATCCAAAGGGTTGATATTCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS-3UTR CAA 90 bp CTCCCCCAGAATATCAACCCTTTGGATGCATTATTTCAGAAGAGATGGTTGGATCAGAATATCAACCCTTaGGATGCATTATTTCAGAAG +
Preference number: 5 (lower is better)
Translates to: LPQNINPLDALFQKRWLDQNINP*DALFQK
Trigger: CTTCTGAAATAATGCATCCAAAGGGTTGATATTCTG...ATCCAACCATCTCTTCTGAAATAATGCATCCAAAGGGTTGATATTCTGGGGGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS CCA 72 bp CTGGGTGGGAGAGGGGTCCGCAGCCACGGAGGGGGCTaGGGCGCGGGCGGATTCCCACATCCTCAGAAGGAG +
Preference number: 6 (lower is better)
Translates to: LGGRGVRSHGGG*GAGGFPHPQKE
Trigger: CTCCTTCTGAGGATGTGGGAATCCGCCCGCGCCCCAGCCCCCTCCGTGGCTGCGGACCCCTCTCCCACCCAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000453427.2
CDS CCA 72 bp GGGCACGCGGGAGCCGAATGCCAACCCAGGCCCCTCTaGGCAAGGAAGTGGGCCAGGAGGTCACTGGGTGGG +
Preference number: 6 (lower is better)
Translates to: GHAGAECQPRPL*ARKWARRSLGG
Trigger: CCCACCCAGTGACCTCCTGGCCCACTTCCTTGCCCAGAGGGGCCTGGGTTGGCATTCGGCTCCCGCGTGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453427.2
CDS TCA 72 bp CGTGGGCAGCGTCGGGGATCCGTCTGTAGGTGCTGGTaGCTCCAGGCACTATGCAGCCCCGTGCCAGGCCCT +
Preference number: 6 (lower is better)
Translates to: RGQRRGSVCRCW*LQALCSPVPGP
Trigger: AGGGCCTGGCACGGGGCTGCATAGTGCCTGGAGTCACCAGCACCTACAGACGGATCCCCGACGCTGCCCACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000453427.2
ENST00000614574.4
CDS CCA 72 bp CCAGCCGCAGGGAGCGGTGTTGTCCTGACAAGCTGGTaGGAGCTGTTGGGAGCCGGCGGGACCGCTCCAACA +
Preference number: 6 (lower is better)
Translates to: PAAGSGVVLTSW*ELLGAGGTAPT
Trigger: TGTTGGAGCGGTCCCGCCGGCTCCCAACAGCTCCCACCAGCTTGTCAGGACAACACCGCTCCCTGCGGCTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS CCA 72 bp TTGCCAGCCGCAGGGAGCGGTGTTGTCCTGACAAGCTaGTGGGAGCTGTTGGGAGCCGGCGGGACCGCTCCA +
Preference number: 6 (lower is better)
Translates to: LPAAGSGVVLTS*WELLGAGGTAP
Trigger: TGGAGCGGTCCCGCCGGCTCCCAACAGCTCCCACCAGCTTGTCAGGACAACACCGCTCCCTGCGGCTGGCAA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS CCA 72 bp AGGAAGTGGGGCGGAGGCGGTGGCTGGTTTAACGCCTaGGCCCAAAGGGGTTCCAGCCTGCATGGCGTCCCC +
Preference number: 6 (lower is better)
Translates to: RKWGGGGGWFNA*AQRGSSLHGVP
Trigger: GGGGACGCCATGCAGGCTGGAACCCCTTTGGGCCCAGGCGTTAAACCAGCCACCGCCTCCGCCCCACTTCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453427.2
CDS TCA 72 bp AGGCTTGCTTGCCAGCCGCAGGGAGCGGTGTTGTCCTaGCAAGCTGGTGGGAGCTGTTGGGAGCCGGCGGGA +
Preference number: 6 (lower is better)
Translates to: RLACQPQGAVLS*QAGGSCWEPAG
Trigger: TCCCGCCGGCTCCCAACAGCTCCCACCAGCTTGTCAGGACAACACCGCTCCCTGCGGCTGGCAAGCAAGCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS GCA 72 bp CCCATCTGCTCTCTGGGGGCCCCTGCGGCATCAGGATaGCAGGTGAAGTCTCTCCTGCAGCTCACCGGGAGA +
Preference number: 6 (lower is better)
Translates to: PICSLGAPAASG*QVKSLLQLTGR
Trigger: TCTCCCGGTGAGCTGCAGGAGAGACTTCACCTGGCATCCTGATGCCGCAGGGGCCCCCAGAGAGCAGATGGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000453427.2
CDS CAA 72 bp GCCCTGCTCCAAGGGGCACTTCACGCTCAGGCTTGCTaGCCAGCCGCAGGGAGCGGTGTTGTCCTGACAAGC +
Preference number: 6 (lower is better)
Translates to: ALLQGALHAQAC*PAAGSGVVLTS
Trigger: GCTTGTCAGGACAACACCGCTCCCTGCGGCTGGCAAGCAAGCCTGAGCGTGAAGTGCCCCTTGGAGCAGGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS GCA 72 bp GTTGCCCTGCTCCAAGGGGCACTTCACGCTCAGGCTTaGTTGCCAGCCGCAGGGAGCGGTGTTGTCCTGACA +
Preference number: 6 (lower is better)
Translates to: VALLQGALHAQA*LPAAGSGVVLT
Trigger: TGTCAGGACAACACCGCTCCCTGCGGCTGGCAAGCAAGCCTGAGCGTGAAGTGCCCCTTGGAGCAGGGCAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS CAA 72 bp TGTTGCCCTGCTCCAAGGGGCACTTCACGCTCAGGCTaGCTTGCCAGCCGCAGGGAGCGGTGTTGTCCTGAC +
Preference number: 6 (lower is better)
Translates to: CCPAPRGTSRSG*LASRRERCCPD
Trigger: GTCAGGACAACACCGCTCCCTGCGGCTGGCAAGCAAGCCTGAGCGTGAAGTGCCCCTTGGAGCAGGGCAACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS CAA 90 bp ACTCCTGTTGCCCTGCTCCAAGGGGCACTTCACGCTCAGGCTTGCTaGCCAGCCGCAGGGAGCGGTGTTGTCCTGACAAGCTGGTGGGAG +
Preference number: 6 (lower is better)
Translates to: TPVALLQGALHAQAC*PAAGSGVVLTSWWE
Trigger: CTCCCACCAGCTTGTCAGGACAACACCGCTCCCTGCGGCTGGCAAGCAAGCCTGAGCGTGAAGTGCCCCTTGGAGCAGGGCAACAGGAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS CAA 90 bp GAGGCCAGTTTGAGAAAGAGTGCCTCCCTGCCGACACCTCTGAACTaGTCACCTCTCTCCCAGGATGAGCACCCGTGGGCAGCGTCGGGG +
Preference number: 6 (lower is better)
Translates to: EASLRKSASLPTPLN*SPLSQDEHPWAASG
Trigger: CCCCGACGCTGCCCACGGGTGCTCATCCTGGGAGAGAGGTGACAAGTTCAGAGGTGTCGGCAGGGAGGCACTCTTTCTCAAACTGGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000453427.2
ENST00000614574.4
ENST00000615223.2
CDS CAA 90 bp ATGGACTCCTGTTGCCCTGCTCCAAGGGGCACTTCACGCTCAGGCTaGCTTGCCAGCCGCAGGGAGCGGTGTTGTCCTGACAAGCTGGTG +
Preference number: 6 (lower is better)
Translates to: MDSCCPAPRGTSRSG*LASRRERCCPDKLV
Trigger: CACCAGCTTGTCAGGACAACACCGCTCCCTGCGGCTGGCAAGCAAGCCTGAGCGTGAAGTGCCCCTTGGAGCAGGGCAACAGGAGTCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS CAA 72 bp GGCTCAGGGTGGTGGTGGCTTCTCCGGCAGATCCGGTaGAGCAGGACCTTGACCTTGTGTCCCTGGGAGGAT +
Preference number: 6 (lower is better)
Translates to: GSGWWWLLRQIR*SRTLTLCPWED
Trigger: ATCCTCCCAGGGACACAAGGTCAAGGTCCTGCTCAACCGGATCTGCCGGAGAAGCCACCACCACCCTGAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409586.7
CDS CAA 90 bp TGGTGGTGGCTTCTCCGGCAGATCCGGTTGAGCAGGACCTTGACCTaGTCCCAGTGGGAGATATCCCGCTTGTGTCCCTGGGAGGATGGC +
Preference number: 6 (lower is better)
Translates to: WWWLLRQIRLSRTLT*SQWEISRLCPWEDG
Trigger: GCCATCCTCCCAGGGACACAAGCGGGATATCTCCCACTGGGACAAGGTCAAGGTCCTGCTCAACCGGATCTGCCGGAGAAGCCACCACCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289989.10
ENST00000615223.2
CDS CAA 90 bp TCAGGGTGGTGGTGGCTTCTCCGGCAGATCCGGTTGAGCAGGACCTaGACCTTGTCCCAGTGGGAGATATCCCGCTTGTGTCCCTGGGAG +
Preference number: 6 (lower is better)
Translates to: SGWWWLLRQIRLSRT*TLSQWEISRLCPWE
Trigger: CTCCCAGGGACACAAGCGGGATATCTCCCACTGGGACAAGGTCAAGGTCCTGCTCAACCGGATCTGCCGGAGAAGCCACCACCACCCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289989.10
ENST00000615223.2
CDS TCA 72 bp TCAGAACTCCCTGAGGATTCAAAGTCCAGGGAGTCCTaGGAAAGGCCCGGTAAGGCGGCCAGGGGGCTGTCC +
Preference number: 6 (lower is better)
Translates to: SELPEDSKSRES*ERPGKAARGLS
Trigger: GGACAGCCCCCTGGCCGCCTTACCGGGCCTTTCTCAGGACTCCCTGGACTTTGAATCCTCAGGGAGTTCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000453427.2
ENST00000614574.4
ENST00000615223.2
CDS CCA 72 bp CTTCCAGGCCTGCCTCTAGGTCTGTGTCTGCCTCCATaGACTCCTGTTGCCCTGCTCCAAGGGGCACTTCAC +
Preference number: 6 (lower is better)
Translates to: LPGLPLGLCLPP*TPVALLQGALH
Trigger: GTGAAGTGCCCCTTGGAGCAGGGCAACAGGAGTCCATGGAGGCAGACACAGACCTAGAGGCAGGCCTGGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000614574.4
ENST00000615223.2
CDS CAA 72 bp GGCTCAGGGTGGTGGTGGCTTCTCCGGCAGATCCGGTaGAGCAGGACCTTGACCTTGTCCCAGTGGGAGATA +
Preference number: 6 (lower is better)
Translates to: GSGWWWLLRQIR*SRTLTLSQWEI
Trigger: TATCTCCCACTGGGACAAGGTCAAGGTCCTGCTCAACCGGATCTGCCGGAGAAGCCACCACCACCCTGAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289989.10
ENST00000495957.1
ENST00000615223.2
CDS CAA 72 bp GCCCACCACCTGCCCCACATATACCTGTCCCCTACCTaGTGTCCCTGGGAGGATGGCAAGTGGTACGTTGGC +
Preference number: 6 (lower is better)
Translates to: AHHLPHIYLSPT*CPWEDGKWYVG
Trigger: GCCAACGTACCACTTGCCATCCTCCCAGGGACACAAGGTAGGGGACAGGTATATGTGGGGCAGGTGGTGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495957.1
CDS TCA 72 bp AATGATGGCATAAAGGTCTTCCGGTGGGGGCGGCACTaGGGCCTTTCAGGGAGGTCCCTGGACTCGATCCTG +
Preference number: 6 (lower is better)
Translates to: NDGIKVFRWGRH*GLSGRSLDSIL
Trigger: CAGGATCGAGTCCAGGGACCTCCCTGAAAGGCCTCAGTGCCGCCCCCACCGGAAGACCTTTATGCCATCATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000615223.2
CDS CCA 72 bp CAGATCCGGTTGAGCAGGACCTTGACCTTGTCCCAGTaGGAGATATCCCGCTTGTGTCCCTGGGAGGATGGC +
Preference number: 6 (lower is better)
Translates to: QIRLSRTLTLSQ*EISRLCPWEDG
Trigger: GCCATCCTCCCAGGGACACAAGCGGGATATCTCCCACTGGGACAAGGTCAAGGTCCTGCTCAACCGGATCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289989.10
ENST00000475994.1
ENST00000615223.2
CDS CCA 72 bp CTGCCCCACATATACCTGTCCCCTACCTTGTGTCCCTaGGAGGATGGCAAGTGGTACGTTGGCTCCACTGGG +
Preference number: 6 (lower is better)
Translates to: LPHIYLSPTLCP*EDGKWYVGSTG
Trigger: CCCAGTGGAGCCAACGTACCACTTGCCATCCTCCCAGGGACACAAGGTAGGGGACAGGTATATGTGGGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495957.1
CDS CCA 72 bp AGGTCCCTGGACTCGATCCTTGTGTCCCTGGGAGGATaGCAAGTGGTACGTTGGCTCCACTGGGGTTTCTGG +
Preference number: 6 (lower is better)
Translates to: RSLDSILVSLGG*QVVRWLHWGFW
Trigger: CCAGAAACCCCAGTGGAGCCAACGTACCACTTGCCATCCTCCCAGGGACACAAGGATCGAGTCCAGGGACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614574.4
CDS CAA 72 bp ACTGCCATCTCCACTCCTGAGTCCCGGGAGGCCAGTTaGAGAAAGAGTGCCTCCCTGCCGACACCTCTGAAC +
Preference number: 6 (lower is better)
Translates to: TAISTPESREAS*RKSASLPTPLN
Trigger: GTTCAGAGGTGTCGGCAGGGAGGCACTCTTTCTCAAACTGGCCTCCCGGGACTCAGGAGTGGAGATGGCAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000453427.2
ENST00000614574.4
ENST00000615223.2
CDS CAA 72 bp CTTCTCCGGCAGATCCGGTTGAGCAGGACCTTGACCTaGTCCCAGTGGGAGATATCCCGCTTGTGTCCCTGG +
Preference number: 6 (lower is better)
Translates to: LLRQIRLSRTLT*SQWEISRLCPW
Trigger: CCAGGGACACAAGCGGGATATCTCCCACTGGGACAAGGTCAAGGTCCTGCTCAACCGGATCTGCCGGAGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289989.10
ENST00000615223.2
CDS CAA 72 bp CACTGGGCACCTCCACCTTTGGGGGTGAAGCAGCCTTaGCTCCTTCAGAAAGACAGTCAGGTTGGCCAGGGC +
Preference number: 6 (lower is better)
Translates to: HWAPPPLGVKQP*LLQKDSQVGQG
Trigger: GCCCTGGCCAACCTGACTGTCTTTCTGAAGGAGCAAAGGCTGCTTCACCCCCAAAGGTGGAGGTGCCCAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475994.1
CDS CAA 90 bp GAGGGTTGGCACTGGGCACCTCCACCTTTGGGGGTGAAGCAGCCTTaGCTCCTTCAGAAAGACAGTCAGGTTGGCCAGGGCCAGAAGACA +
Preference number: 6 (lower is better)
Translates to: EGWHWAPPPLGVKQP*LLQKDSQVGQGQKT
Trigger: TGTCTTCTGGCCCTGGCCAACCTGACTGTCTTTCTGAAGGAGCAAAGGCTGCTTCACCCCCAAAGGTGGAGGTGCCCAGTGCCAACCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475994.1
CDS TCA 72 bp AATGATGGCATAAAGGTCTTCCGGTGGGGGCGGCACTaGGGCCTTTCAGGGAGGTCCCTGGACTCGATCCTT +
Preference number: 6 (lower is better)
Translates to: NDGIKVFRWGRH*GLSGRSLDSIL
Trigger: AAGGATCGAGTCCAGGGACCTCCCTGAAAGGCCTCAGTGCCGCCCCCACCGGAAGACCTTTATGCCATCATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000614574.4
CDS GCA 72 bp CTTCACAGCAAGTCCCCTCCACCCAGGGTCACCAGGTaGACCGAGAGGTCTCAGCCTACAGAAAGGTTTTGC +
Preference number: 6 (lower is better)
Translates to: LHSKSPPPRVTR*TERSQPTERFC
Trigger: GCAAAACCTTTCTGTAGGCTGAGACCTCTCGGTGCACCTGGTGACCCTGGGTGGAGGGGACTTGCTGTGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615223.2
CDS CAA 72 bp TTGAGAAAGAGTGCCTCCCTGCCGACACCTCTGAACTaGTCACCTCTCTCCCAGGATGAGCACCCGTGGGCA +
Preference number: 6 (lower is better)
Translates to: LRKSASLPTPLN*SPLSQDEHPWA
Trigger: TGCCCACGGGTGCTCATCCTGGGAGAGAGGTGACAAGTTCAGAGGTGTCGGCAGGGAGGCACTCTTTCTCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000289989.10
ENST00000409586.7
ENST00000453427.2
ENST00000614574.4
ENST00000615223.2
CDS CAA 72 bp TGGTGGCTTCTCCGGCAGATCCGGTTGAGCAGGACCTaGACCTTGTCCCAGTGGGAGATATCCCGCTTGTGT +
Preference number: 6 (lower is better)
Translates to: WWLLRQIRLSRT*TLSQWEISRLC
Trigger: ACACAAGCGGGATATCTCCCACTGGGACAAGGTCAAGGTCCTGCTCAACCGGATCTGCCGGAGAAGCCACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289989.10
ENST00000615223.2
CDS CCA 72 bp GAAGCAGCCTTTGCTCCTTCAGAAAGACAGTCAGGTTaGCCAGGGCCAGAAGACACCCCATCAAGCTTCGGC +
Preference number: 6 (lower is better)
Translates to: EAAFAPSERQSG*PGPEDTPSSFG
Trigger: GCCGAAGCTTGATGGGGTGTCTTCTGGCCCTGGCCAACCTGACTGTCTTTCTGAAGGAGCAAAGGCTGCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475994.1
CDS CCA 72 bp CATATACCTGTCCCCTACCTTGTGTCCCTGGGAGGATaGCAAGTGGTACGTTGGCTCCACTGGGGTTTCTGG +
Preference number: 6 (lower is better)
Translates to: HIPVPYLVSLGG*QVVRWLHWGFW
Trigger: CCAGAAACCCCAGTGGAGCCAACGTACCACTTGCCATCCTCCCAGGGACACAAGGTAGGGGACAGGTATATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495957.1
CDS GCA 72 bp CAGAGACAGCTGTCGCCACAGCCAGGACAAGTCGCCTaGTCCAAACAGGAATCAATCCTGTCATTTCCCCAG +
Preference number: 6 (lower is better)
Translates to: QRQLSPQPGQVA*SKQESILSFPQ
Trigger: CTGGGGAAATGACAGGATTGATTCCTGTTTGGAGCAGGCGACTTGTCCTGGCTGTGGCGACAGCTGTCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495957.1
CDS GCA 72 bp CCGAGAGGTCTCAGCCTACAGAAAGGTTTTGCTCGTTaGTTCTTAACCACTAATGATGGCATAAAGGTCTTC +
Preference number: 6 (lower is better)
Translates to: PRGLSLQKGFAR*FLTTNDGIKVF
Trigger: GAAGACCTTTATGCCATCATTAGTGGTTAAGAAGCAACGAGCAAAACCTTTCTGTAGGCTGAGACCTCTCGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615223.2