Pregenerated sensors for C8ORF44 (Homo sapiens)
Ensembl gene IDs: ENSG00000288596Ensembl transcript IDs: ENST00000390159.3, ENST00000518860.1, ENST00000521113.1, ENST00000521889.5, ENST00000661636.1
Found 23 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CCGACAGCCTCCCATGAGGGAAAGTGTGGGAATGGGGATAGGGGGTaGTGGCTGGTTGAGATAACTCTCATTCTTCCTCATTTCAACTAC | + |
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Preference number: 5 (lower is better) Translates to: PTASHEGKCGNGDRG*WLVEITLILPHFNY Trigger: GTAGTTGAAATGAGGAAGAATGAGAGTTATCTCAACCAGCCAGCACCCCCTATCCCCATTCCCACACTTTCCCTCATGGGAGGCTGTCGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000390159.3 ENST00000521889.5 ENST00000661636.1 |
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| CDS CCA 90 bp | ACAGCCTCCCATGAGGGAAAGTGTGGGAATGGGGATAGGGGGTGCTaGCTGGTTGAGATAACTCTCATTCTTCCTCATTTCAACTACGTT | + |
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Preference number: 5 (lower is better) Translates to: TASHEGKCGNGDRGC*LVEITLILPHFNYV Trigger: AACGTAGTTGAAATGAGGAAGAATGAGAGTTATCTCAACCAGCCAGCACCCCCTATCCCCATTCCCACACTTTCCCTCATGGGAGGCTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000390159.3 ENST00000521889.5 ENST00000661636.1 |
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| CDS CCA 90 bp | GATTCTTTTCCTCTTGGGCTTCTGGGATTTCAAACTCGGTACATCTaGTCTCTTGGAGACACATCCTCCCTGGAAGCTCCAGCAGAAGAT | + |
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Preference number: 5 (lower is better) Translates to: DSFPLGLLGFQTRYI*SLGDTSSLEAPAED Trigger: ATCTTCTGCTGGAGCTTCCAGGGAGGATGTGTCTCCAAGAGACCAGATGTACCGAGTTTGAAATCCCAGAAGCCCAAGAGGAAAAGAATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000390159.3 ENST00000518860.1 ENST00000521113.1 ENST00000661636.1 |
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| CDS TCA 90 bp | CCTAGTGACCCCATGCAGATAACAACCTGCCCAACTCTTCAGCCCTaGCCTGGCATCATATTTATCTATAACTGGCAGTTCTTCTCTGAC | + |
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Preference number: 5 (lower is better) Translates to: PSDPMQITTCPTLQP*PGIIFIYNWQFFSD Trigger: GTCAGAGAAGAACTGCCAGTTATAGATAAATATGATGCCAGGTCAGGGCTGAAGAGTTGGGCAGGTTGTTATCTGCATGGGGTCACTAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000390159.3 ENST00000661636.1 |
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| CDS CCA 90 bp | GCCCTTCTTTTTCCTAGACATTCTAGAGCCATCACTGTTGCTCTCTaGAGAGTCACAATGTCCTTAGCAAAGAAAGGCTATGAGAAGACC | + |
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Preference number: 5 (lower is better) Translates to: ALLFPRHSRAITVAL*RVTMSLAKKGYEKT Trigger: GGTCTTCTCATAGCCTTTCTTTGCTAAGGACATTGTGACTCTCCAGAGAGCAACAGTGATGGCTCTAGAATGTCTAGGAAAAAGAAGGGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000390159.3 ENST00000521889.5 |
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| CDS TCA 90 bp | ATACCAATTCTGGTTAGTGGGTTTCATTTATTCTCATTTTACAGATaGGAACGACCAGAGATGTTAGCTTGCCCAAAATTACTCAAATAC | + |
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Preference number: 5 (lower is better) Translates to: IPILVSGFHLFSFYR*ERPEMLACPKLLKY Trigger: GTATTTGAGTAATTTTGGGCAAGCTAACATCTCTGGTCGTTCTCATCTGTAAAATGAGAATAAATGAAACCCACTAACCAGAATTGGTAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000390159.3 ENST00000661636.1 |
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| CDS CCA 72 bp | CTTCCTCTGTCACCCAGGCTTCAGCCCCAACTCCCCTaGGCTCAGGCTATCCTCTTGCCTCAGCTTCCCGAG | + |
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Preference number: 6 (lower is better) Translates to: LPLSPRLQPQLP*AQAILLPQLPE Trigger: CTCGGGAAGCTGAGGCAAGAGGATAGCCTGAGCCCAGGGGAGTTGGGGCTGAAGCCTGGGTGACAGAGGAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000661636.1 |
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| CDS GCA 72 bp | AGCCACCGTGCCCGGCCTTTCCAGTGGTTTTCGAAGTaGTCCCGACAGCCTCCCATGAGGGAAAGTGTGGGA | + |
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Preference number: 6 (lower is better) Translates to: SHRARPFQWFSK*SRQPPMRESVG Trigger: TCCCACACTTTCCCTCATGGGAGGCTGTCGGGAGCACTTCGAAAACCACTGGAAAGGCCGGGCACGGTGGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000390159.3 ENST00000521889.5 ENST00000661636.1 |
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| CDS TCA 72 bp | AGTCGTCAGCAAGTAGAAGGCTCCCTTTCAGGAAACTaGAACCGGGTGCCAGGTGGCTGCAGAGCGGGTGAG | + |
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Preference number: 6 (lower is better) Translates to: SRQQVEGSLSGN*NRVPGGCRAGE Trigger: CTCACCCGCTCTGCAGCCACCTGGCACCCGGTTTCAGTTTCCTGAAAGGGAGCCTTCTACTTGCTGACGACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000390159.3 ENST00000661636.1 |
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| CDS CAA 72 bp | GGCTTCTGGGATTTCAAACTCGGTACATCTGGTCTCTaGGAGACACATCCTCCCTGGAAGCTCCAGCAGAAG | + |
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Preference number: 6 (lower is better) Translates to: GFWDFKLGTSGL*ETHPPWKLQQK Trigger: CTTCTGCTGGAGCTTCCAGGGAGGATGTGTCTCCAAGAGACCAGATGTACCGAGTTTGAAATCCCAGAAGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000390159.3 ENST00000518860.1 ENST00000521113.1 ENST00000661636.1 |
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| CDS CAA 90 bp | TTCCTCTTGGGCTTCTGGGATTTCAAACTCGGTACATCTGGTCTCTaGGAGACACATCCTCCCTGGAAGCTCCAGCAGAAGATGGCCAAA | + |
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Preference number: 6 (lower is better) Translates to: FLLGFWDFKLGTSGL*ETHPPWKLQQKMAK Trigger: TTTGGCCATCTTCTGCTGGAGCTTCCAGGGAGGATGTGTCTCCAAGAGACCAGATGTACCGAGTTTGAAATCCCAGAAGCCCAAGAGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000390159.3 ENST00000518860.1 ENST00000521113.1 ENST00000661636.1 |
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| CDS TCA 72 bp | ACAAGACCTGGCCAAATGTTGCCCCAAATCCATACCTaGTGGAGACAGGAAGGGCCTTTAGTGCTTGTGTGT | + |
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Preference number: 6 (lower is better) Translates to: TRPGQMLPQIHT*WRQEGPLVLVC Trigger: ACACACAAGCACTAAAGGCCCTTCCTGTCTCCATCAGGTATGGATTTGGGGCAACATTTGGCCAGGTCTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000390159.3 ENST00000661636.1 |
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| CDS CCA 72 bp | CATGAGGGAAAGTGTGGGAATGGGGATAGGGGGTGCTaGCTGGTTGAGATAACTCTCATTCTTCCTCATTTC | + |
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Preference number: 6 (lower is better) Translates to: HEGKCGNGDRGC*LVEITLILPHF Trigger: GAAATGAGGAAGAATGAGAGTTATCTCAACCAGCCAGCACCCCCTATCCCCATTCCCACACTTTCCCTCATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000390159.3 ENST00000521889.5 ENST00000661636.1 |
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| CDS CAA 72 bp | ACAGTGGCCAATTACAGCCAATCAAAGTCGTCCTTCTaGGTGAAGACAGACATCAACACTCCCGGGGATGAG | + |
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Preference number: 6 (lower is better) Translates to: TVANYSQSKSSF*VKTDINTPGDE Trigger: CTCATCCCCGGGAGTGTTGATGTCTGTCTTCACCAAGAAGGACGACTTTGATTGGCTGTAATTGGCCACTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000521113.1 |
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| CDS TCA 72 bp | TGGCCAATTACAGCCAATCAAAGTCGTCCTTCTTGGTaGAGACAGACATCAACACTCCCGGGGATGAGTCAT | + |
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Preference number: 6 (lower is better) Translates to: WPITANQSRPSW*RQTSTLPGMSH Trigger: ATGACTCATCCCCGGGAGTGTTGATGTCTGTCTTCACCAAGAAGGACGACTTTGATTGGCTGTAATTGGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000521113.1 |
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| CDS TCA 72 bp | CCCATGCAGATAACAACCTGCCCAACTCTTCAGCCCTaGCCTGGCATCATATTTATCTATAACTGGCAGTTC | + |
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Preference number: 6 (lower is better) Translates to: PMQITTCPTLQP*PGIIFIYNWQF Trigger: GAACTGCCAGTTATAGATAAATATGATGCCAGGTCAGGGCTGAAGAGTTGGGCAGGTTGTTATCTGCATGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000390159.3 ENST00000661636.1 |
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| CDS CAA 72 bp | ATACTCACCCAGTCCTCTATCTTAAAACACTACCCCTaGGTTCTAGAGGGTGTGATGGCTATGCAGGTCTGT | + |
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Preference number: 6 (lower is better) Translates to: ILTQSSILKHYP*VLEGVMAMQVC Trigger: ACAGACCTGCATAGCCATCACACCCTCTAGAACCAAGGGGTAGTGTTTTAAGATAGAGGACTGGGTGAGTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000518860.1 |
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| CDS CAA 72 bp | GATATGAAACAATGTGCAGAAGGACATCTTCTAGTGTaGTGTGCCCCAAGCAGACTCCTGACATTAAGCCCT | + |
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Preference number: 6 (lower is better) Translates to: DMKQCAEGHLLV*CAPSRLLTLSP Trigger: AGGGCTTAATGTCAGGAGTCTGCTTGGGGCACACAACACTAGAAGATGTCCTTCTGCACATTGTTTCATATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000390159.3 ENST00000521889.5 |
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| CDS CAA 72 bp | ACAGTGGCCAATTACAGCCAATCAAAGTCGTCCTTCTaGGTGAAGACAGACACTGTTGTTCATGCAGGTATG | + |
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Preference number: 6 (lower is better) Translates to: TVANYSQSKSSF*VKTDTVVHAGM Trigger: CATACCTGCATGAACAACAGTGTCTGTCTTCACCAAGAAGGACGACTTTGATTGGCTGTAATTGGCCACTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000518860.1 |
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| CDS CAA 90 bp | AGCTTTCTGATACTCACCCAGTCCTCTATCTTAAAACACTACCCCTaGGTTCTAGAGGGTGTGATGGCTATGCAGGTCTGTTTCTCATTT | + |
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Preference number: 6 (lower is better) Translates to: SFLILTQSSILKHYP*VLEGVMAMQVCFSF Trigger: AAATGAGAAACAGACCTGCATAGCCATCACACCCTCTAGAACCAAGGGGTAGTGTTTTAAGATAGAGGACTGGGTGAGTATCAGAAAGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000518860.1 |
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| CDS CCA 72 bp | TTTCCTAGACATTCTAGAGCCATCACTGTTGCTCTCTaGAGAGTCACAATGTCCTTAGCAAAGAAAGGCTAT | + |
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Preference number: 6 (lower is better) Translates to: FPRHSRAITVAL*RVTMSLAKKGY Trigger: ATAGCCTTTCTTTGCTAAGGACATTGTGACTCTCCAGAGAGCAACAGTGATGGCTCTAGAATGTCTAGGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000390159.3 ENST00000521889.5 |
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| CDS TCA 72 bp | CTGGAGAGTCACAATGTCCTTAGCAAAGAAAGGCTATaGGAAGACCTATTAAAATGTCTTCCGCAACTACAG | + |
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Preference number: 6 (lower is better) Translates to: LESHNVLSKERL*EDLLKCLPQLQ Trigger: CTGTAGTTGCGGAAGACATTTTAATAGGTCTTCTCATAGCCTTTCTTTGCTAAGGACATTGTGACTCTCCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000390159.3 |
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| CDS CAA 72 bp | CTCATTTTACAGATGAGAACGACCAGAGATGTTAGCTaGCCCAAAATTACTCAAATACTAAATGACAAAGCT | + |
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Preference number: 6 (lower is better) Translates to: LILQMRTTRDVS*PKITQILNDKA Trigger: AGCTTTGTCATTTAGTATTTGAGTAATTTTGGGCAAGCTAACATCTCTGGTCGTTCTCATCTGTAAAATGAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000390159.3 ENST00000661636.1 |
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