RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for C8B (Homo sapiens)

Ensembl gene IDs: ENSG00000021852

Ensembl transcript IDs: ENST00000371237.9, ENST00000465658.1, ENST00000468990.1, ENST00000494324.1, ENST00000535057.5, ENST00000543257.5

Found 286 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR TCA 90 bp AGCTTGCATGGCACTGCCTTTTGCCCTTGCATGAACTCCAGGTGGAAACTGGTGAGGGCTGAGCTGGCATaGGTTCTTGAGGGCTCAGGG +
Preference number: 2 (lower is better)
Translates to: SLHGTAFCPCMNSRWKLVRAELA*VLEGSG
Trigger: CCCTGAGCCCTCAAGAACTCATGCCAGCTCAGCCCT...CACCAGTTTCCACCTGGAGTTCATGCAAGGGCAAAAGGCAGTGCCATGCAAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
3UTR-3UTR TCA 90 bp CATCTTTATTTTAAACAGCTTGCATGGCACTGCCTTTTGCCCTTGCATGAACTCAGGGCTGAGCTGGCATaGGTTCTTGAGGGCTCAGGG +
Preference number: 2 (lower is better)
Translates to: HLYFKQLAWHCLLPLHELRAELA*VLEGSG
Trigger: CCCTGAGCCCTCAAGAACTCATGCCAGCTCAGCCCT...GAGTTCATGCAAGGGCAAAAGGCAGTGCCATGCAAGCTGTTTAAAATAAAGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
3UTR-3UTR TCA 90 bp ATCTTTATTTTAAACAGCTTGCATGGCACTGCCTTTTGCCCTTGCATGAACTCCGCTGGCATGAGTTCTTaGGGGCTCAGGGCTCTCATT +
Preference number: 2 (lower is better)
Translates to: IFILNSLHGTAFCPCMNSAGMSS*GLRALI
Trigger: AATGAGAGCCCTGAGCCCTCAAGAACTCATGCCAGC...GGAGTTCATGCAAGGGCAAAAGGCAGTGCCATGCAAGCTGTTTAAAATAAAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
3UTR-3UTR CCA 90 bp TTACAAGGTAACATCTTTATTTTAAACAGCTTGCATGGCACTGCCTTTTGCCCTGGTGTAGGGCTGAGCTaGCATGAGTTCTTGAGGGCT +
Preference number: 2 (lower is better)
Translates to: LQGNIFILNSLHGTAFCPGVGLS*HEFLRA
Trigger: AGCCCTCAAGAACTCATGCCAGCTCAGCCCTACACC...AGGGCAAAAGGCAGTGCCATGCAAGCTGTTTAAAATAAAGATGTTACCTTGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
3UTR-3UTR CAA 90 bp AGCTTGCATGGCACTGCCTTTTGCCCTTGCATGAACTCCAGGTGGAAACTGGTGGGCTCAGGGCTCTCATaGTATGTAGCCCACTGCTGT +
Preference number: 3 (lower is better)
Translates to: SLHGTAFCPCMNSRWKLVGSGLS*YVAHCC
Trigger: ACAGCAGTGGGCTACATACAATGAGAGCCCTGAGCC...CACCAGTTTCCACCTGGAGTTCATGCAAGGGCAAAAGGCAGTGCCATGCAAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
3UTR TCA 72 bp ACTCCAGGTGGAAACTGGTGTAGGGCTGAGCTGGCATaGGTTCTTGAGGGCTCAGGGCTCTCATTGTATGTA +
Preference number: 3 (lower is better)
Translates to: TPGGNWCRAELA*VLEGSGLSLYV
Trigger: TACATACAATGAGAGCCCTGAGCCCTCAAGAACTCATGCCAGCTCAGCCCTACACCAGTTTCCACCTGGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
3UTR-3UTR CAA 90 bp ATTTTAAACAGCTTGCATGGCACTGCCTTTTGCCCTTGCATGAACTCCAGGTGGAGCTGGCATGAGTTCTaGAGGGCTCAGGGCTCTCAT +
Preference number: 3 (lower is better)
Translates to: ILNSLHGTAFCPCMNSRWSWHEF*RAQGSH
Trigger: ATGAGAGCCCTGAGCCCTCAAGAACTCATGCCAGCT...CCACCTGGAGTTCATGCAAGGGCAAAAGGCAGTGCCATGCAAGCTGTTTAAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
3UTR-3UTR CAA 90 bp CATCTTTATTTTAAACAGCTTGCATGGCACTGCCTTTTGCCCTTGCATGAACTCAGCTGGCATGAGTTCTaGAGGGCTCAGGGCTCTCAT +
Preference number: 3 (lower is better)
Translates to: HLYFKQLAWHCLLPLHELSWHEF*RAQGSH
Trigger: ATGAGAGCCCTGAGCCCTCAAGAACTCATGCCAGCT...GAGTTCATGCAAGGGCAAAAGGCAGTGCCATGCAAGCTGTTTAAAATAAAGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
3UTR-3UTR CAA 90 bp TTACAAGGTAACATCTTTATTTTAAACAGCTTGCATGGCACTGCCTTTTGCCCTGGCTCAGGGCTCTCATaGTATGTAGCCCACTGCTGT +
Preference number: 3 (lower is better)
Translates to: LQGNIFILNSLHGTAFCPGSGLS*YVAHCC
Trigger: ACAGCAGTGGGCTACATACAATGAGAGCCCTGAGCC...AGGGCAAAAGGCAGTGCCATGCAAGCTGTTTAAAATAAAGATGTTACCTTGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR CCA 90 bp CCCTTGCATGAACTCCAGGTGGAAACTGGTGTAGGGCTGAGCTGGCATGAGTTCGCCGTCGGCAGCTCCTaGTATGCCAGGGTGGTGATG +
Preference number: 4 (lower is better)
Translates to: PLHELQVETGVGLSWHEFAVGSS*YARVVM
Trigger: CATCACCACCCTGGCATACCAGGAGCTGCCGACGGC...GAACTCATGCCAGCTCAGCCCTACACCAGTTTCCACCTGGAGTTCATGCAAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR TCA 90 bp CCCTTGCATGAACTCCAGGTGGAAACTGGTGTAGGGCTGAGCTGGCATGAGTTCAGGGCTGAGCTGGCATaGGTTCTTGAGGGCTCAGGG +
Preference number: 4 (lower is better)
Translates to: PLHELQVETGVGLSWHEFRAELA*VLEGSG
Trigger: CCCTGAGCCCTCAAGAACTCATGCCAGCTCAGCCCT...GAACTCATGCCAGCTCAGCCCTACACCAGTTTCCACCTGGAGTTCATGCAAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR GCA 90 bp CCCTTGCATGAACTCCAGGTGGAAACTGGTGTAGGGCTGAGCTGGCATGAGTTCGCCAGGGTGGTGATGTaGTCACTTGCCCCTCCTCGT +
Preference number: 4 (lower is better)
Translates to: PLHELQVETGVGLSWHEFARVVM*SLAPPR
Trigger: ACGAGGAGGGGCAAGTGAGCACATCACCACCCTGGC...GAACTCATGCCAGCTCAGCCCTACACCAGTTTCCACCTGGAGTTCATGCAAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR GCA 90 bp TGCCTTTTGCCCTTGCATGAACTCCAGGTGGAAACTGGTGTAGGGCTGAGCTGGGCCAGGGTGGTGATGTaGTCACTTGCCCCTCCTCGT +
Preference number: 4 (lower is better)
Translates to: CLLPLHELQVETGVGLSWARVVM*SLAPPR
Trigger: ACGAGGAGGGGCAAGTGAGCACATCACCACCCTGGC...CCAGCTCAGCCCTACACCAGTTTCCACCTGGAGTTCATGCAAGGGCAAAAGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR CCA 90 bp AGCTTGCATGGCACTGCCTTTTGCCCTTGCATGAACTCCAGGTGGAAACTGGTGGCCGTCGGCAGCTCCTaGTATGCCAGGGTGGTGATG +
Preference number: 4 (lower is better)
Translates to: SLHGTAFCPCMNSRWKLVAVGSS*YARVVM
Trigger: CATCACCACCCTGGCATACCAGGAGCTGCCGACGGC...CACCAGTTTCCACCTGGAGTTCATGCAAGGGCAAAAGGCAGTGCCATGCAAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR TCA 90 bp TGCCTTTTGCCCTTGCATGAACTCCAGGTGGAAACTGGTGTAGGGCTGAGCTGGGCTGGCATGAGTTCTTaGGGGCTCAGGGCTCTCATT +
Preference number: 4 (lower is better)
Translates to: CLLPLHELQVETGVGLSWAGMSS*GLRALI
Trigger: AATGAGAGCCCTGAGCCCTCAAGAACTCATGCCAGC...CCAGCTCAGCCCTACACCAGTTTCCACCTGGAGTTCATGCAAGGGCAAAAGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR GCA 90 bp CCCTTGCATGAACTCCAGGTGGAAACTGGTGTAGGGCTGAGCTGGCATGAGTTCAGCCTGTGCTGTGAGTaGCACTGTCAGCTTCTGTCC +
Preference number: 4 (lower is better)
Translates to: PLHELQVETGVGLSWHEFSLCCE*HCQLLS
Trigger: GGACAGAAGCTGACAGTGGCACTCACAGCACAGGCT...GAACTCATGCCAGCTCAGCCCTACACCAGTTTCCACCTGGAGTTCATGCAAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535057.5
ENST00000543257.5
CDS-3UTR CCA 90 bp CCCTTGCATGAACTCCAGGTGGAAACTGGTGTAGGGCTGAGCTGGCATGAGTTCGGTGTAGGGCTGAGCTaGCATGAGTTCTTGAGGGCT +
Preference number: 4 (lower is better)
Translates to: PLHELQVETGVGLSWHEFGVGLS*HEFLRA
Trigger: AGCCCTCAAGAACTCATGCCAGCTCAGCCCTACACC...GAACTCATGCCAGCTCAGCCCTACACCAGTTTCCACCTGGAGTTCATGCAAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR CCA 90 bp TGCCTTTTGCCCTTGCATGAACTCCAGGTGGAAACTGGTGTAGGGCTGAGCTGGACTCCAGGTGGAAACTaGTGTAGGGCTGAGCTGGCA +
Preference number: 4 (lower is better)
Translates to: CLLPLHELQVETGVGLSWTPGGN*CRAELA
Trigger: TGCCAGCTCAGCCCTACACCAGTTTCCACCTGGAGT...CCAGCTCAGCCCTACACCAGTTTCCACCTGGAGTTCATGCAAGGGCAAAAGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR TCA 90 bp ATTTTAAACAGCTTGCATGGCACTGCCTTTTGCCCTTGCATGAACTCCAGGTGGTGGAGCCAGGCAAACTaGGACAGCCCAGGGCAGCAC +
Preference number: 4 (lower is better)
Translates to: ILNSLHGTAFCPCMNSRWWSQAN*DSPGQH
Trigger: GTGCTGCCCTGGGCTGTCTCAGTTTGCCTGGCTCCA...CCACCTGGAGTTCATGCAAGGGCAAAAGGCAGTGCCATGCAAGCTGTTTAAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR TCA 90 bp AGCTTGCATGGCACTGCCTTTTGCCCTTGCATGAACTCCAGGTGGAAACTGGTGGCTGGCATGAGTTCTTaGGGGCTCAGGGCTCTCATT +
Preference number: 4 (lower is better)
Translates to: SLHGTAFCPCMNSRWKLVAGMSS*GLRALI
Trigger: AATGAGAGCCCTGAGCCCTCAAGAACTCATGCCAGC...CACCAGTTTCCACCTGGAGTTCATGCAAGGGCAAAAGGCAGTGCCATGCAAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR GCA 90 bp TTGCCCTTGCATGAACTCCAGGTGGAAACTGGTGTAGGGCTGAGCTGGCATGAGTCCCACTGGCCAGACTaGCAATTCCCCAGTATTGGT +
Preference number: 4 (lower is better)
Translates to: LPLHELQVETGVGLSWHESHWPD*QFPSIG
Trigger: ACCAATACTGGGGAATTGGCAGTCTGGCCAGTGGGA...CTCATGCCAGCTCAGCCCTACACCAGTTTCCACCTGGAGTTCATGCAAGGGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR GCA 90 bp TGCCTTTTGCCCTTGCATGAACTCCAGGTGGAAACTGGTGTAGGGCTGAGCTGGCATGGCACTGCCTTTTaGCCTTGCATGAACTCCAGG +
Preference number: 4 (lower is better)
Translates to: CLLPLHELQVETGVGLSWHGTAF*PCMNSR
Trigger: CCTGGAGTTCATGCAAGGGCAAAAGGCAGTGCCATG...CCAGCTCAGCCCTACACCAGTTTCCACCTGGAGTTCATGCAAGGGCAAAAGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR GCA 90 bp CCCTTGCATGAACTCCAGGTGGAAACTGGTGTAGGGCTGAGCTGGCATGAGTTCCCCATAACAAGCCTGTaGTGTGAGTGCCACTGTCAG +
Preference number: 4 (lower is better)
Translates to: PLHELQVETGVGLSWHEFPITSL*CECHCQ
Trigger: CTGACAGTGGCACTCACAGCACAGGCTTGTTATGGG...GAACTCATGCCAGCTCAGCCCTACACCAGTTTCCACCTGGAGTTCATGCAAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535057.5
ENST00000543257.5
CDS-3UTR CCA 90 bp ATTTTAAACAGCTTGCATGGCACTGCCTTTTGCCCTTGCATGAACTCCAGGTGGGCCGTCGGCAGCTCCTaGTATGCCAGGGTGGTGATG +
Preference number: 4 (lower is better)
Translates to: ILNSLHGTAFCPCMNSRWAVGSS*YARVVM
Trigger: CATCACCACCCTGGCATACCAGGAGCTGCCGACGGC...CCACCTGGAGTTCATGCAAGGGCAAAAGGCAGTGCCATGCAAGCTGTTTAAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR CCA 90 bp AGCTTGCATGGCACTGCCTTTTGCCCTTGCATGAACTCCAGGTGGAAACTGGTGACTCCAGGTGGAAACTaGTGTAGGGCTGAGCTGGCA +
Preference number: 4 (lower is better)
Translates to: SLHGTAFCPCMNSRWKLVTPGGN*CRAELA
Trigger: TGCCAGCTCAGCCCTACACCAGTTTCCACCTGGAGT...CACCAGTTTCCACCTGGAGTTCATGCAAGGGCAAAAGGCAGTGCCATGCAAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR TCA 90 bp TGCCTTTTGCCCTTGCATGAACTCCAGGTGGAAACTGGTGTAGGGCTGAGCTGGCTGTACCTTTTCTTCTaGCAGGGGTCACATGTGGTC +
Preference number: 4 (lower is better)
Translates to: CLLPLHELQVETGVGLSWLYLFF*QGSHVV
Trigger: GACCACATGTGACCCCTGTCAGAAGAAAAGGTACAG...CCAGCTCAGCCCTACACCAGTTTCCACCTGGAGTTCATGCAAGGGCAAAAGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371237.9
ENST00000543257.5
CDS-3UTR TCA 90 bp AGCTTGCATGGCACTGCCTTTTGCCCTTGCATGAACTCCAGGTGGAAACTGGTGCCTTCACATCGCACTTaGCTTCCGCATGGTCTGTTG +
Preference number: 4 (lower is better)
Translates to: SLHGTAFCPCMNSRWKLVPSHRT*LPHGLL
Trigger: CAACAGACCATGCGGAAGTCAAGTGCGATGTGAAGG...CACCAGTTTCCACCTGGAGTTCATGCAAGGGCAAAAGGCAGTGCCATGCAAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR TCA 90 bp CCCTTGCATGAACTCCAGGTGGAAACTGGTGTAGGGCTGAGCTGGCATGAGTTCACTCGTAATGGAGCATaGGGCTTCTGGGTTTCAGCT +
Preference number: 4 (lower is better)
Translates to: PLHELQVETGVGLSWHEFTRNGA*GFWVSA
Trigger: AGCTGAAACCCAGAAGCCTCATGCTCCATTACGAGT...GAACTCATGCCAGCTCAGCCCTACACCAGTTTCCACCTGGAGTTCATGCAAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR TCA 90 bp TTGCCCTTGCATGAACTCCAGGTGGAAACTGGTGTAGGGCTGAGCTGGCATGAGCAAGCACAGCCTCTGTaGTGTAGTGGGTCCCAAAAT +
Preference number: 4 (lower is better)
Translates to: LPLHELQVETGVGLSWHEQAQPL*CSGSQN
Trigger: ATTTTGGGACCCACTACATCACAGAGGCTGTGCTTG...CTCATGCCAGCTCAGCCCTACACCAGTTTCCACCTGGAGTTCATGCAAGGGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR TCA 90 bp TGCCTTTTGCCCTTGCATGAACTCCAGGTGGAAACTGGTGTAGGGCTGAGCTGGCAAGCACAGCCTCTGTaGTGTAGTGGGTCCCAAAAT +
Preference number: 4 (lower is better)
Translates to: CLLPLHELQVETGVGLSWQAQPL*CSGSQN
Trigger: ATTTTGGGACCCACTACATCACAGAGGCTGTGCTTG...CCAGCTCAGCCCTACACCAGTTTCCACCTGGAGTTCATGCAAGGGCAAAAGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR TCA 90 bp AGCTTGCATGGCACTGCCTTTTGCCCTTGCATGAACTCCAGGTGGAAACTGGTGGGGCTACCCCCATTTTaGGGAGGTGGATTGTTACAC +
Preference number: 4 (lower is better)
Translates to: SLHGTAFCPCMNSRWKLVGLPPF*GGGLLH
Trigger: GTGTAACAATCCACCTCCTCAAAATGGGGGTAGCCC...CACCAGTTTCCACCTGGAGTTCATGCAAGGGCAAAAGGCAGTGCCATGCAAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR TCA 90 bp ATTTTAAACAGCTTGCATGGCACTGCCTTTTGCCCTTGCATGAACTCCAGGTGGAGGGCTGAGCTGGCATaGGTTCTTGAGGGCTCAGGG +
Preference number: 4 (lower is better)
Translates to: ILNSLHGTAFCPCMNSRWRAELA*VLEGSG
Trigger: CCCTGAGCCCTCAAGAACTCATGCCAGCTCAGCCCT...CCACCTGGAGTTCATGCAAGGGCAAAAGGCAGTGCCATGCAAGCTGTTTAAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR GCA 90 bp TTGCCCTTGCATGAACTCCAGGTGGAAACTGGTGTAGGGCTGAGCTGGCATGAGCCTTGTCAGAGAAGTTaGACGGTTCCCCATGGAACT +
Preference number: 4 (lower is better)
Translates to: LPLHELQVETGVGLSWHEPCQRS*TVPHGT
Trigger: AGTTCCATGGGGAACCGTGCAACTTCTCTGACAAGG...CTCATGCCAGCTCAGCCCTACACCAGTTTCCACCTGGAGTTCATGCAAGGGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR GCA 90 bp TGCCTTTTGCCCTTGCATGAACTCCAGGTGGAAACTGGTGTAGGGCTGAGCTGGCGGGGAGCATCCACCTaGATAATACCTGTGATCAAG +
Preference number: 4 (lower is better)
Translates to: CLLPLHELQVETGVGLSWRGAST*IIPVIK
Trigger: CTTGATCACAGGTATTATGCAGGTGGATGCTCCCCG...CCAGCTCAGCCCTACACCAGTTTCCACCTGGAGTTCATGCAAGGGCAAAAGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR GCA 90 bp CCCTTGCATGAACTCCAGGTGGAAACTGGTGTAGGGCTGAGCTGGCATGAGTTCGGGTGTATTCATAAATaGCCCCAAGCACAGCCTCTG +
Preference number: 4 (lower is better)
Translates to: PLHELQVETGVGLSWHEFGCIHK*PQAQPL
Trigger: CAGAGGCTGTGCTTGGGGGCATTTATGAATACACCC...GAACTCATGCCAGCTCAGCCCTACACCAGTTTCCACCTGGAGTTCATGCAAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR GCA 90 bp ATTTTAAACAGCTTGCATGGCACTGCCTTTTGCCCTTGCATGAACTCCAGGTGGCGGCAGCTCCTGGTATaGCAGGGTGGTGATGTGCTC +
Preference number: 4 (lower is better)
Translates to: ILNSLHGTAFCPCMNSRWRQLLV*QGGDVL
Trigger: GAGCACATCACCACCCTGGCATACCAGGAGCTGCCG...CCACCTGGAGTTCATGCAAGGGCAAAAGGCAGTGCCATGCAAGCTGTTTAAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR GCA 90 bp CATCTTTATTTTAAACAGCTTGCATGGCACTGCCTTTTGCCCTTGCATGAACTCGCGTCTCCCCACTCCTaGATCAGGTCCGCCGTCGGC +
Preference number: 4 (lower is better)
Translates to: HLYFKQLAWHCLLPLHELASPHS*IRSAVG
Trigger: GCCGACGGCGGACCTGATGCAGGAGTGGGGAGACGC...GAGTTCATGCAAGGGCAAAAGGCAGTGCCATGCAAGCTGTTTAAAATAAAGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR GCA 90 bp CCCTTGCATGAACTCCAGGTGGAAACTGGTGTAGGGCTGAGCTGGCATGAGTTCAACTCCTCCAGTGCCTaGTTCATGTTCTGCCTCACT +
Preference number: 4 (lower is better)
Translates to: PLHELQVETGVGLSWHEFNSSSA*FMFCLT
Trigger: AGTGAGGCAGAACATGAAGCAGGCACTGGAGGAGTT...GAACTCATGCCAGCTCAGCCCTACACCAGTTTCCACCTGGAGTTCATGCAAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR GCA 90 bp AGCTTGCATGGCACTGCCTTTTGCCCTTGCATGAACTCCAGGTGGAAACTGGTGCTGGAACTCCTCCAGTaGCTGCTTCATGTTCTGCCT +
Preference number: 4 (lower is better)
Translates to: SLHGTAFCPCMNSRWKLVLELLQ*LLHVLP
Trigger: AGGCAGAACATGAAGCAGGCACTGGAGGAGTTCCAG...CACCAGTTTCCACCTGGAGTTCATGCAAGGGCAAAAGGCAGTGCCATGCAAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR GCA 90 bp AGCTTGCATGGCACTGCCTTTTGCCCTTGCATGAACTCCAGGTGGAAACTGGTGCATGGCACTGCCTTTTaGCCTTGCATGAACTCCAGG +
Preference number: 4 (lower is better)
Translates to: SLHGTAFCPCMNSRWKLVHGTAF*PCMNSR
Trigger: CCTGGAGTTCATGCAAGGGCAAAAGGCAGTGCCATG...CACCAGTTTCCACCTGGAGTTCATGCAAGGGCAAAAGGCAGTGCCATGCAAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR CCA 90 bp CCCTTGCATGAACTCCAGGTGGAAACTGGTGTAGGGCTGAGCTGGCATGAGTTCCCAAGTCCTCCACCATaGTGTCCCTCTTGTTTCTGT +
Preference number: 4 (lower is better)
Translates to: PLHELQVETGVGLSWHEFPSPPP*CPSCFC
Trigger: ACAGAAACAAGAGGGACACCATGGTGGAGGACTTGG...GAACTCATGCCAGCTCAGCCCTACACCAGTTTCCACCTGGAGTTCATGCAAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR CCA 90 bp TGCCTTTTGCCCTTGCATGAACTCCAGGTGGAAACTGGTGTAGGGCTGAGCTGGCCAAGTCCTCCACCATaGTGTCCCTCTTGTTTCTGT +
Preference number: 4 (lower is better)
Translates to: CLLPLHELQVETGVGLSWPSPPP*CPSCFC
Trigger: ACAGAAACAAGAGGGACACCATGGTGGAGGACTTGG...CCAGCTCAGCCCTACACCAGTTTCCACCTGGAGTTCATGCAAGGGCAAAAGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR TCA 90 bp TTGCCCTTGCATGAACTCCAGGTGGAAACTGGTGTAGGGCTGAGCTGGCATGAGCTTGTTGACTGCATTTaGCCCAAAGGAATGTGGCCT +
Preference number: 4 (lower is better)
Translates to: LPLHELQVETGVGLSWHELVDCI*PKGMWP
Trigger: AGGCCACATTCCTTTGGGTCAAATGCAGTCAACAAG...CTCATGCCAGCTCAGCCCTACACCAGTTTCCACCTGGAGTTCATGCAAGGGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR TCA 90 bp AGCTTGCATGGCACTGCCTTTTGCCCTTGCATGAACTCCAGGTGGAAACTGGTGACTCGTAATGGAGCATaGGGCTTCTGGGTTTCAGCT +
Preference number: 4 (lower is better)
Translates to: SLHGTAFCPCMNSRWKLVTRNGA*GFWVSA
Trigger: AGCTGAAACCCAGAAGCCTCATGCTCCATTACGAGT...CACCAGTTTCCACCTGGAGTTCATGCAAGGGCAAAAGGCAGTGCCATGCAAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR GCA 90 bp AGCTTGCATGGCACTGCCTTTTGCCCTTGCATGAACTCCAGGTGGAAACTGGTGCCTTGTCAGAGAAGTTaGACGGTTCCCCATGGAACT +
Preference number: 4 (lower is better)
Translates to: SLHGTAFCPCMNSRWKLVPCQRS*TVPHGT
Trigger: AGTTCCATGGGGAACCGTGCAACTTCTCTGACAAGG...CACCAGTTTCCACCTGGAGTTCATGCAAGGGCAAAAGGCAGTGCCATGCAAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR GCA 90 bp TGCCTTTTGCCCTTGCATGAACTCCAGGTGGAAACTGGTGTAGGGCTGAGCTGGACACCTTCCTGTCTGTaGACACACAAAGCCTTCACA +
Preference number: 4 (lower is better)
Translates to: CLLPLHELQVETGVGLSWTPSCL*THKAFT
Trigger: TGTGAAGGCTTTGTGTGTGCACAGACAGGAAGGTGT...CCAGCTCAGCCCTACACCAGTTTCCACCTGGAGTTCATGCAAGGGCAAAAGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR GCA 90 bp TTGCCCTTGCATGAACTCCAGGTGGAAACTGGTGTAGGGCTGAGCTGGCATGAGGAATACCTCTGCATTTaGCTACAGACACACCCAGAC +
Preference number: 4 (lower is better)
Translates to: LPLHELQVETGVGLSWHEEYLCI*LQTHPD
Trigger: GTCTGGGTGTGTCTGTAGGCAAATGCAGAGGTATTC...CTCATGCCAGCTCAGCCCTACACCAGTTTCCACCTGGAGTTCATGCAAGGGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR GCA 90 bp ATTTTAAACAGCTTGCATGGCACTGCCTTTTGCCCTTGCATGAACTCCAGGTGGGGTGATGTGCTCACTTaGCCCTCCTCGTACCAGGAC +
Preference number: 4 (lower is better)
Translates to: ILNSLHGTAFCPCMNSRWGDVLT*PSSYQD
Trigger: GTCCTGGTACGAGGAGGGGCAAGTGAGCACATCACC...CCACCTGGAGTTCATGCAAGGGCAAAAGGCAGTGCCATGCAAGCTGTTTAAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR GCA 90 bp ATTTTAAACAGCTTGCATGGCACTGCCTTTTGCCCTTGCATGAACTCCAGGTGGATGGCTGGGTTGTACTaGACAGCGTCTCCCCACTCC +
Preference number: 4 (lower is better)
Translates to: ILNSLHGTAFCPCMNSRWMAGLY*TASPHS
Trigger: GGAGTGGGGAGACGCTGTGCAGTACAACCCAGCCAT...CCACCTGGAGTTCATGCAAGGGCAAAAGGCAGTGCCATGCAAGCTGTTTAAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR GCA 90 bp AGCTTGCATGGCACTGCCTTTTGCCCTTGCATGAACTCCAGGTGGAAACTGGTGAACTCCTCCAGTGCCTaGTTCATGTTCTGCCTCACT +
Preference number: 4 (lower is better)
Translates to: SLHGTAFCPCMNSRWKLVNSSSA*FMFCLT
Trigger: AGTGAGGCAGAACATGAAGCAGGCACTGGAGGAGTT...CACCAGTTTCCACCTGGAGTTCATGCAAGGGCAAAAGGCAGTGCCATGCAAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR GCA 90 bp TGCCTTTTGCCCTTGCATGAACTCCAGGTGGAAACTGGTGTAGGGCTGAGCTGGATCCAACAGGACAGATaGAGTCACAGCGTGATCCTT +
Preference number: 4 (lower is better)
Translates to: CLLPLHELQVETGVGLSWIQQDR*SHSVIL
Trigger: AAGGATCACGCTGTGACTGCATCTGTCCTGTTGGAT...CCAGCTCAGCCCTACACCAGTTTCCACCTGGAGTTCATGCAAGGGCAAAAGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR CCA 90 bp CCCTTGCATGAACTCCAGGTGGAAACTGGTGTAGGGCTGAGCTGGCATGAGTTCACAAATTTATCCCACTaGCCAGACTGCCAATTCCCC +
Preference number: 4 (lower is better)
Translates to: PLHELQVETGVGLSWHEFTNLSH*PDCQFP
Trigger: GGGGAATTGGCAGTCTGGCCAGTGGGATAAATTTGT...GAACTCATGCCAGCTCAGCCCTACACCAGTTTCCACCTGGAGTTCATGCAAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR CCA 90 bp TTGCCCTTGCATGAACTCCAGGTGGAAACTGGTGTAGGGCTGAGCTGGCATGAGTTTGCCTTGGGTCTGTaGCGTGTAGCTTTCCACATT +
Preference number: 4 (lower is better)
Translates to: LPLHELQVETGVGLSWHEFALGL*RVAFHI
Trigger: AATGTGGAAAGCTACACGCCACAGACCCAAGGCAAA...CTCATGCCAGCTCAGCCCTACACCAGTTTCCACCTGGAGTTCATGCAAGGGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR CCA 90 bp TGCCTTTTGCCCTTGCATGAACTCCAGGTGGAAACTGGTGTAGGGCTGAGCTGGTCTGCCTCACTGTGCTaGAATAGGCAAAATCTGTGG +
Preference number: 4 (lower is better)
Translates to: CLLPLHELQVETGVGLSWSASLC*NRQNLW
Trigger: CCACAGATTTTGCCTATTCCAGCACAGTGAGGCAGA...CCAGCTCAGCCCTACACCAGTTTCCACCTGGAGTTCATGCAAGGGCAAAAGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR CCA 90 bp TGCCTTTTGCCCTTGCATGAACTCCAGGTGGAAACTGGTGTAGGGCTGAGCTGGTCCACTTCCCATCAATaGGGGTATTCTTCCGATAGG +
Preference number: 4 (lower is better)
Translates to: CLLPLHELQVETGVGLSWSTSHQ*GYSSDR
Trigger: CCTATCGGAAGAATACCCCCATTGATGGGAAGTGGA...CCAGCTCAGCCCTACACCAGTTTCCACCTGGAGTTCATGCAAGGGCAAAAGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR TCA 90 bp AGCTTGCATGGCACTGCCTTTTGCCCTTGCATGAACTCCAGGTGGAAACTGGTGTTCATTTTCCCAATGTaGCAGGAGATGCCACAGAGG +
Preference number: 4 (lower is better)
Translates to: SLHGTAFCPCMNSRWKLVFIFPM*QEMPQR
Trigger: CCTCTGTGGCATCTCCTGTCACATTGGGAAAATGAA...CACCAGTTTCCACCTGGAGTTCATGCAAGGGCAAAAGGCAGTGCCATGCAAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR TCA 90 bp CCCTTGCATGAACTCCAGGTGGAAACTGGTGTAGGGCTGAGCTGGCATGAGTTCTTGCCTCGATCACTTTaGCTACTGATGCCAAGTTCA +
Preference number: 4 (lower is better)
Translates to: PLHELQVETGVGLSWHEFLPRSL*LLMPSS
Trigger: TGAACTTGGCATCAGTAGTCAAAGTGATCGAGGCAA...GAACTCATGCCAGCTCAGCCCTACACCAGTTTCCACCTGGAGTTCATGCAAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR TCA 90 bp ATTTTAAACAGCTTGCATGGCACTGCCTTTTGCCCTTGCATGAACTCCAGGTGGGATGCAGTCACAGCGTaGTCCTTTCAGGACAGGGAC +
Preference number: 4 (lower is better)
Translates to: ILNSLHGTAFCPCMNSRWDAVTA*SFQDRD
Trigger: GTCCCTGTCCTGAAAGGATCACGCTGTGACTGCATC...CCACCTGGAGTTCATGCAAGGGCAAAAGGCAGTGCCATGCAAGCTGTTTAAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR TCA 90 bp ATTTTAAACAGCTTGCATGGCACTGCCTTTTGCCCTTGCATGAACTCCAGGTGGGCTGGCATGAGTTCTTaGGGGCTCAGGGCTCTCATT +
Preference number: 4 (lower is better)
Translates to: ILNSLHGTAFCPCMNSRWAGMSS*GLRALI
Trigger: AATGAGAGCCCTGAGCCCTCAAGAACTCATGCCAGC...CCACCTGGAGTTCATGCAAGGGCAAAAGGCAGTGCCATGCAAGCTGTTTAAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR GCA 90 bp TGCCTTTTGCCCTTGCATGAACTCCAGGTGGAAACTGGTGTAGGGCTGAGCTGGCATTGCAAAGAAGTCTaGGGTTTACACACCTTCCTG +
Preference number: 4 (lower is better)
Translates to: CLLPLHELQVETGVGLSWHCKEV*GLHTFL
Trigger: CAGGAAGGTGTGTAAACCGCAGACTTCTTTGCAATG...CCAGCTCAGCCCTACACCAGTTTCCACCTGGAGTTCATGCAAGGGCAAAAGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR GCA 90 bp TTACAAGGTAACATCTTTATTTTAAACAGCTTGCATGGCACTGCCTTTTGCCCTGCGTCTCCCCACTCCTaGATCAGGTCCGCCGTCGGC +
Preference number: 4 (lower is better)
Translates to: LQGNIFILNSLHGTAFCPASPHS*IRSAVG
Trigger: GCCGACGGCGGACCTGATGCAGGAGTGGGGAGACGC...AGGGCAAAAGGCAGTGCCATGCAAGCTGTTTAAAATAAAGATGTTACCTTGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR GCA 90 bp TTGCCCTTGCATGAACTCCAGGTGGAAACTGGTGTAGGGCTGAGCTGGCATGAGTGTTCTGCCTCACTGTaGTGGAATAGGCAAAATCTG +
Preference number: 4 (lower is better)
Translates to: LPLHELQVETGVGLSWHECSASL*WNRQNL
Trigger: CAGATTTTGCCTATTCCAGCACAGTGAGGCAGAACA...CTCATGCCAGCTCAGCCCTACACCAGTTTCCACCTGGAGTTCATGCAAGGGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR GCA 90 bp TGCCTTTTGCCCTTGCATGAACTCCAGGTGGAAACTGGTGTAGGGCTGAGCTGGTGTTCTGCCTCACTGTaGTGGAATAGGCAAAATCTG +
Preference number: 4 (lower is better)
Translates to: CLLPLHELQVETGVGLSWCSASL*WNRQNL
Trigger: CAGATTTTGCCTATTCCAGCACAGTGAGGCAGAACA...CCAGCTCAGCCCTACACCAGTTTCCACCTGGAGTTCATGCAAGGGCAAAAGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR GCA 90 bp AGCTTGCATGGCACTGCCTTTTGCCCTTGCATGAACTCCAGGTGGAAACTGGTGATCCAACAGGACAGATaGAGTCACAGCGTGATCCTT +
Preference number: 4 (lower is better)
Translates to: SLHGTAFCPCMNSRWKLVIQQDR*SHSVIL
Trigger: AAGGATCACGCTGTGACTGCATCTGTCCTGTTGGAT...CACCAGTTTCCACCTGGAGTTCATGCAAGGGCAAAAGGCAGTGCCATGCAAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR CCA 90 bp CCCTTGCATGAACTCCAGGTGGAAACTGGTGTAGGGCTGAGCTGGCATGAGTTCCCCATTTTGAGGAGGTaGATTGTTACACTGCCTTTG +
Preference number: 4 (lower is better)
Translates to: PLHELQVETGVGLSWHEFPILRR*IVTLPL
Trigger: CAAAGGCAGTGTAACAATCCACCTCCTCAAAATGGG...GAACTCATGCCAGCTCAGCCCTACACCAGTTTCCACCTGGAGTTCATGCAAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR CCA 90 bp TTGCCCTTGCATGAACTCCAGGTGGAAACTGGTGTAGGGCTGAGCTGGCATGAGTTTAAACAGCTTGCATaGCACTGCCTTTTGCCCTTG +
Preference number: 4 (lower is better)
Translates to: LPLHELQVETGVGLSWHEFKQLA*HCLLPL
Trigger: CAAGGGCAAAAGGCAGTGCCATGCAAGCTGTTTAAA...CTCATGCCAGCTCAGCCCTACACCAGTTTCCACCTGGAGTTCATGCAAGGGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR CCA 90 bp CCCTTGCATGAACTCCAGGTGGAAACTGGTGTAGGGCTGAGCTGGCATGAGTTCTTTAAACAGCTTGCATaGCACTGCCTTTTGCCCTTG +
Preference number: 4 (lower is better)
Translates to: PLHELQVETGVGLSWHEFFKQLA*HCLLPL
Trigger: CAAGGGCAAAAGGCAGTGCCATGCAAGCTGTTTAAA...GAACTCATGCCAGCTCAGCCCTACACCAGTTTCCACCTGGAGTTCATGCAAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR CCA 90 bp CCCTTGCATGAACTCCAGGTGGAAACTGGTGTAGGGCTGAGCTGGCATGAGTTCTGGCCAATACGAAGGTaGTCTCAGCATTTTCTGTTC +
Preference number: 4 (lower is better)
Translates to: PLHELQVETGVGLSWHEFWPIRR*SQHFLF
Trigger: GAACAGAAAATGCTGAGACCACCTTCGTATTGGCCA...GAACTCATGCCAGCTCAGCCCTACACCAGTTTCCACCTGGAGTTCATGCAAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543257.5
CDS-3UTR TCA 90 bp ATTTTAAACAGCTTGCATGGCACTGCCTTTTGCCCTTGCATGAACTCCAGGTGGCCTTCACATCGCACTTaGCTTCCGCATGGTCTGTTG +
Preference number: 4 (lower is better)
Translates to: ILNSLHGTAFCPCMNSRWPSHRT*LPHGLL
Trigger: CAACAGACCATGCGGAAGTCAAGTGCGATGTGAAGG...CCACCTGGAGTTCATGCAAGGGCAAAAGGCAGTGCCATGCAAGCTGTTTAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR TCA 90 bp ATTTTAAACAGCTTGCATGGCACTGCCTTTTGCCCTTGCATGAACTCCAGGTGGGGGCTACCCCCATTTTaGGGAGGTGGATTGTTACAC +
Preference number: 4 (lower is better)
Translates to: ILNSLHGTAFCPCMNSRWGLPPF*GGGLLH
Trigger: GTGTAACAATCCACCTCCTCAAAATGGGGGTAGCCC...CCACCTGGAGTTCATGCAAGGGCAAAAGGCAGTGCCATGCAAGCTGTTTAAAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR TCA 90 bp ATCTTTATTTTAAACAGCTTGCATGGCACTGCCTTTTGCCCTTGCATGAACTCCAGGGCTGAGCTGGCATaGGTTCTTGAGGGCTCAGGG +
Preference number: 4 (lower is better)
Translates to: IFILNSLHGTAFCPCMNSRAELA*VLEGSG
Trigger: CCCTGAGCCCTCAAGAACTCATGCCAGCTCAGCCCT...GGAGTTCATGCAAGGGCAAAAGGCAGTGCCATGCAAGCTGTTTAAAATAAAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR GCA 90 bp ATTTTAAACAGCTTGCATGGCACTGCCTTTTGCCCTTGCATGAACTCCAGGTGGTCCCACTGGCCAGACTaGCAATTCCCCAGTATTGGT +
Preference number: 4 (lower is better)
Translates to: ILNSLHGTAFCPCMNSRWSHWPD*QFPSIG
Trigger: ACCAATACTGGGGAATTGGCAGTCTGGCCAGTGGGA...CCACCTGGAGTTCATGCAAGGGCAAAAGGCAGTGCCATGCAAGCTGTTTAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR GCA 90 bp CCCTTGCATGAACTCCAGGTGGAAACTGGTGTAGGGCTGAGCTGGCATGAGTTCTTCAAGGTCAGAGCGTaGATGCAGAAATACGCTTTT +
Preference number: 4 (lower is better)
Translates to: PLHELQVETGVGLSWHEFFKVRA*MQKYAF
Trigger: AAAAGCGTATTTCTGCATGCACGCTCTGACCTTGAA...GAACTCATGCCAGCTCAGCCCTACACCAGTTTCCACCTGGAGTTCATGCAAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR GCA 90 bp CATCTTTATTTTAAACAGCTTGCATGGCACTGCCTTTTGCCCTTGCATGAACTCCGGCAGCTCCTGGTATaGCAGGGTGGTGATGTGCTC +
Preference number: 4 (lower is better)
Translates to: HLYFKQLAWHCLLPLHELRQLLV*QGGDVL
Trigger: GAGCACATCACCACCCTGGCATACCAGGAGCTGCCG...GAGTTCATGCAAGGGCAAAAGGCAGTGCCATGCAAGCTGTTTAAAATAAAGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR GCA 90 bp ATCTTTATTTTAAACAGCTTGCATGGCACTGCCTTTTGCCCTTGCATGAACTCCCGGCAGCTCCTGGTATaGCAGGGTGGTGATGTGCTC +
Preference number: 4 (lower is better)
Translates to: IFILNSLHGTAFCPCMNSRQLLV*QGGDVL
Trigger: GAGCACATCACCACCCTGGCATACCAGGAGCTGCCG...GGAGTTCATGCAAGGGCAAAAGGCAGTGCCATGCAAGCTGTTTAAAATAAAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR GCA 90 bp ATTTTAAACAGCTTGCATGGCACTGCCTTTTGCCCTTGCATGAACTCCAGGTGGCTGGAACTCCTCCAGTaGCTGCTTCATGTTCTGCCT +
Preference number: 4 (lower is better)
Translates to: ILNSLHGTAFCPCMNSRWLELLQ*LLHVLP
Trigger: AGGCAGAACATGAAGCAGGCACTGGAGGAGTTCCAG...CCACCTGGAGTTCATGCAAGGGCAAAAGGCAGTGCCATGCAAGCTGTTTAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR CCA 90 bp TTGCCCTTGCATGAACTCCAGGTGGAAACTGGTGTAGGGCTGAGCTGGCATGAGTCCAAGCCCATGTCCTaGAATTCTTCATTTTCCCAA +
Preference number: 4 (lower is better)
Translates to: LPLHELQVETGVGLSWHESKPMS*NSSFSQ
Trigger: TTGGGAAAATGAAGAATTCCAGGACATGGGCTTGGA...CTCATGCCAGCTCAGCCCTACACCAGTTTCCACCTGGAGTTCATGCAAGGGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR CCA 90 bp AGCTTGCATGGCACTGCCTTTTGCCCTTGCATGAACTCCAGGTGGAAACTGGTGCCTGTGATCAAGAACTaGGCCCTCAAAACTGTTTGT +
Preference number: 4 (lower is better)
Translates to: SLHGTAFCPCMNSRWKLVPVIKN*ALKTVC
Trigger: ACAAACAGTTTTGAGGGCCCAGTTCTTGATCACAGG...CACCAGTTTCCACCTGGAGTTCATGCAAGGGCAAAAGGCAGTGCCATGCAAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR CCA 90 bp ATTTTAAACAGCTTGCATGGCACTGCCTTTTGCCCTTGCATGAACTCCAGGTGGTCACAGGCTAGGCCTTaGGATCCAACAGGACAGATG +
Preference number: 4 (lower is better)
Translates to: ILNSLHGTAFCPCMNSRWSQARP*DPTGQM
Trigger: CATCTGTCCTGTTGGATCCCAAGGCCTAGCCTGTGA...CCACCTGGAGTTCATGCAAGGGCAAAAGGCAGTGCCATGCAAGCTGTTTAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR CCA 90 bp AGCTTGCATGGCACTGCCTTTTGCCCTTGCATGAACTCCAGGTGGAAACTGGTGCCCATTTTGAGGAGGTaGATTGTTACACTGCCTTTG +
Preference number: 4 (lower is better)
Translates to: SLHGTAFCPCMNSRWKLVPILRR*IVTLPL
Trigger: CAAAGGCAGTGTAACAATCCACCTCCTCAAAATGGG...CACCAGTTTCCACCTGGAGTTCATGCAAGGGCAAAAGGCAGTGCCATGCAAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR CCA 90 bp TTGCCCTTGCATGAACTCCAGGTGGAAACTGGTGTAGGGCTGAGCTGGCATGAGAAAGCCACTAGTGACTaGAAACAGACTTTGCACAGA +
Preference number: 4 (lower is better)
Translates to: LPLHELQVETGVGLSWHEKATSD*KQTLHR
Trigger: TCTGTGCAAAGTCTGTTTCCAGTCACTAGTGGCTTT...CTCATGCCAGCTCAGCCCTACACCAGTTTCCACCTGGAGTTCATGCAAGGGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535057.5
ENST00000543257.5
CDS-3UTR CCA 90 bp CCCTTGCATGAACTCCAGGTGGAAACTGGTGTAGGGCTGAGCTGGCATGAGTTCTCTTCTACTCGCAGATaGAATTCAAATACCTGGAGC +
Preference number: 4 (lower is better)
Translates to: PLHELQVETGVGLSWHEFSSTRR*NSNTWS
Trigger: GCTCCAGGTATTTGAATTCCATCTGCGAGTAGAAGA...GAACTCATGCCAGCTCAGCCCTACACCAGTTTCCACCTGGAGTTCATGCAAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543257.5
CDS-3UTR TCA 90 bp TTACAAGGTAACATCTTTATTTTAAACAGCTTGCATGGCACTGCCTTTTGCCCTTGGAGCCAGGCAAACTaGGACAGCCCAGGGCAGCAC +
Preference number: 4 (lower is better)
Translates to: LQGNIFILNSLHGTAFCPWSQAN*DSPGQH
Trigger: GTGCTGCCCTGGGCTGTCTCAGTTTGCCTGGCTCCA...AGGGCAAAAGGCAGTGCCATGCAAGCTGTTTAAAATAAAGATGTTACCTTGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR TCA 90 bp ATTTTAAACAGCTTGCATGGCACTGCCTTTTGCCCTTGCATGAACTCCAGGTGGCTGTACCTTTTCTTCTaGCAGGGGTCACATGTGGTC +
Preference number: 4 (lower is better)
Translates to: ILNSLHGTAFCPCMNSRWLYLFF*QGSHVV
Trigger: GACCACATGTGACCCCTGTCAGAAGAAAAGGTACAG...CCACCTGGAGTTCATGCAAGGGCAAAAGGCAGTGCCATGCAAGCTGTTTAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000371237.9
ENST00000543257.5
CDS-3UTR TCA 90 bp TTGCCCTTGCATGAACTCCAGGTGGAAACTGGTGTAGGGCTGAGCTGGCATGAGCCTCAAAACTGTTTGTaGACAAATTTATCCCACTGG +
Preference number: 4 (lower is better)
Translates to: LPLHELQVETGVGLSWHEPQNCL*TNLSHW
Trigger: CCAGTGGGATAAATTTGTTCACAAACAGTTTTGAGG...CTCATGCCAGCTCAGCCCTACACCAGTTTCCACCTGGAGTTCATGCAAGGGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR TCA 90 bp ATTTTAAACAGCTTGCATGGCACTGCCTTTTGCCCTTGCATGAACTCCAGGTGGACTCGTAATGGAGCATaGGGCTTCTGGGTTTCAGCT +
Preference number: 4 (lower is better)
Translates to: ILNSLHGTAFCPCMNSRWTRNGA*GFWVSA
Trigger: AGCTGAAACCCAGAAGCCTCATGCTCCATTACGAGT...CCACCTGGAGTTCATGCAAGGGCAAAAGGCAGTGCCATGCAAGCTGTTTAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR GCA 90 bp ATTTTAAACAGCTTGCATGGCACTGCCTTTTGCCCTTGCATGAACTCCAGGTGGCGGGGAGCATCCACCTaGATAATACCTGTGATCAAG +
Preference number: 4 (lower is better)
Translates to: ILNSLHGTAFCPCMNSRWRGAST*IIPVIK
Trigger: CTTGATCACAGGTATTATGCAGGTGGATGCTCCCCG...CCACCTGGAGTTCATGCAAGGGCAAAAGGCAGTGCCATGCAAGCTGTTTAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR GCA 90 bp CCCTTGCATGAACTCCAGGTGGAAACTGGTGTAGGGCTGAGCTGGCATGAGTTCGAAACCAGACTTGCTTaGCATTTTCTCTGTGACATT +
Preference number: 4 (lower is better)
Translates to: PLHELQVETGVGLSWHEFETRLA*HFLCDI
Trigger: AATGTCACAGAGAAAATGGCAAGCAAGTCTGGTTTC...GAACTCATGCCAGCTCAGCCCTACACCAGTTTCCACCTGGAGTTCATGCAAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR GCA 90 bp ATTTTAAACAGCTTGCATGGCACTGCCTTTTGCCCTTGCATGAACTCCAGGTGGGGGTGTATTCATAAATaGCCCCAAGCACAGCCTCTG +
Preference number: 4 (lower is better)
Translates to: ILNSLHGTAFCPCMNSRWGCIHK*PQAQPL
Trigger: CAGAGGCTGTGCTTGGGGGCATTTATGAATACACCC...CCACCTGGAGTTCATGCAAGGGCAAAAGGCAGTGCCATGCAAGCTGTTTAAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR GCA 90 bp ATCTTTATTTTAAACAGCTTGCATGGCACTGCCTTTTGCCCTTGCATGAACTCCGGTGATGTGCTCACTTaGCCCTCCTCGTACCAGGAC +
Preference number: 4 (lower is better)
Translates to: IFILNSLHGTAFCPCMNSGDVLT*PSSYQD
Trigger: GTCCTGGTACGAGGAGGGGCAAGTGAGCACATCACC...GGAGTTCATGCAAGGGCAAAAGGCAGTGCCATGCAAGCTGTTTAAAATAAAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR GCA 90 bp CATCTTTATTTTAAACAGCTTGCATGGCACTGCCTTTTGCCCTTGCATGAACTCGGTGATGTGCTCACTTaGCCCTCCTCGTACCAGGAC +
Preference number: 4 (lower is better)
Translates to: HLYFKQLAWHCLLPLHELGDVLT*PSSYQD
Trigger: GTCCTGGTACGAGGAGGGGCAAGTGAGCACATCACC...GAGTTCATGCAAGGGCAAAAGGCAGTGCCATGCAAGCTGTTTAAAATAAAGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR GCA 90 bp ATTTTAAACAGCTTGCATGGCACTGCCTTTTGCCCTTGCATGAACTCCAGGTGGCAGCTTGCATGGCACTaGCTTTTGCCCTTGCATGAA +
Preference number: 4 (lower is better)
Translates to: ILNSLHGTAFCPCMNSRWQLAWH*LLPLHE
Trigger: TTCATGCAAGGGCAAAAGGCAGTGCCATGCAAGCTG...CCACCTGGAGTTCATGCAAGGGCAAAAGGCAGTGCCATGCAAGCTGTTTAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR GCA 90 bp TTGCCCTTGCATGAACTCCAGGTGGAAACTGGTGTAGGGCTGAGCTGGCATGAGTACAAGTGTCCATTGTaGTGGAAATGTAGGCTAGAT +
Preference number: 4 (lower is better)
Translates to: LPLHELQVETGVGLSWHEYKCPL*WKCRLD
Trigger: ATCTAGCCTACATTTCCAGCACAATGGACACTTGTA...CTCATGCCAGCTCAGCCCTACACCAGTTTCCACCTGGAGTTCATGCAAGGGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535057.5
CDS-3UTR CCA 90 bp AGCTTGCATGGCACTGCCTTTTGCCCTTGCATGAACTCCAGGTGGAAACTGGTGTCCAAGCCCATGTCCTaGAATTCTTCATTTTCCCAA +
Preference number: 4 (lower is better)
Translates to: SLHGTAFCPCMNSRWKLVSKPMS*NSSFSQ
Trigger: TTGGGAAAATGAAGAATTCCAGGACATGGGCTTGGA...CACCAGTTTCCACCTGGAGTTCATGCAAGGGCAAAAGGCAGTGCCATGCAAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
3UTR CAA 72 bp TATTTTAAACAGCTTGCATGGCACTGCCTTTTGCCCTaGCATGAACTCCAGGTGGAAACTGGTGTAGGGCTG +
Preference number: 4 (lower is better)
Translates to: YFKQLAWHCLLP*HELQVETGVGL
Trigger: CAGCCCTACACCAGTTTCCACCTGGAGTTCATGCAAGGGCAAAAGGCAGTGCCATGCAAGCTGTTTAAAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR TCA 90 bp ATTTTAAACAGCTTGCATGGCACTGCCTTTTGCCCTTGCATGAACTCCAGGTGGTTCATTTTCCCAATGTaGCAGGAGATGCCACAGAGG +
Preference number: 4 (lower is better)
Translates to: ILNSLHGTAFCPCMNSRWFIFPM*QEMPQR
Trigger: CCTCTGTGGCATCTCCTGTCACATTGGGAAAATGAA...CCACCTGGAGTTCATGCAAGGGCAAAAGGCAGTGCCATGCAAGCTGTTTAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR TCA 90 bp AGCTTGCATGGCACTGCCTTTTGCCCTTGCATGAACTCCAGGTGGAAACTGGTGCCTCAAAACTGTTTGTaGACAAATTTATCCCACTGG +
Preference number: 4 (lower is better)
Translates to: SLHGTAFCPCMNSRWKLVPQNCL*TNLSHW
Trigger: CCAGTGGGATAAATTTGTTCACAAACAGTTTTGAGG...CACCAGTTTCCACCTGGAGTTCATGCAAGGGCAAAAGGCAGTGCCATGCAAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR TCA 90 bp CCCTTGCATGAACTCCAGGTGGAAACTGGTGTAGGGCTGAGCTGGCATGAGTTCGATCACTTTGACTACTaGTGCCAAGTTCAAATATTC +
Preference number: 4 (lower is better)
Translates to: PLHELQVETGVGLSWHEFDHFDY*CQVQIF
Trigger: GAATATTTGAACTTGGCATCAGTAGTCAAAGTGATC...GAACTCATGCCAGCTCAGCCCTACACCAGTTTCCACCTGGAGTTCATGCAAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR TCA 90 bp TTGCCCTTGCATGAACTCCAGGTGGAAACTGGTGTAGGGCTGAGCTGGCATGAGGATCACTTTGACTACTaGTGCCAAGTTCAAATATTC +
Preference number: 4 (lower is better)
Translates to: LPLHELQVETGVGLSWHEDHFDY*CQVQIF
Trigger: GAATATTTGAACTTGGCATCAGTAGTCAAAGTGATC...CTCATGCCAGCTCAGCCCTACACCAGTTTCCACCTGGAGTTCATGCAAGGGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR TCA 90 bp TGCCTTTTGCCCTTGCATGAACTCCAGGTGGAAACTGGTGTAGGGCTGAGCTGGAATACGCTTTTAGTATaGGAGAATCGTTTGGTTCTC +
Preference number: 4 (lower is better)
Translates to: CLLPLHELQVETGVGLSWNTLLV*ENRLVL
Trigger: GAGAACCAAACGATTCTCTCATACTAAAAGCGTATT...CCAGCTCAGCCCTACACCAGTTTCCACCTGGAGTTCATGCAAGGGCAAAAGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR GCA 90 bp ATTTTAAACAGCTTGCATGGCACTGCCTTTTGCCCTTGCATGAACTCCAGGTGGGAATACCTCTGCATTTaGCTACAGACACACCCAGAC +
Preference number: 4 (lower is better)
Translates to: ILNSLHGTAFCPCMNSRWEYLCI*LQTHPD
Trigger: GTCTGGGTGTGTCTGTAGGCAAATGCAGAGGTATTC...CCACCTGGAGTTCATGCAAGGGCAAAAGGCAGTGCCATGCAAGCTGTTTAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR GCA 90 bp TTACAAGGTAACATCTTTATTTTAAACAGCTTGCATGGCACTGCCTTTTGCCCTGCCAGGGTGGTGATGTaGTCACTTGCCCCTCCTCGT +
Preference number: 4 (lower is better)
Translates to: LQGNIFILNSLHGTAFCPARVVM*SLAPPR
Trigger: ACGAGGAGGGGCAAGTGAGCACATCACCACCCTGGC...AGGGCAAAAGGCAGTGCCATGCAAGCTGTTTAAAATAAAGATGTTACCTTGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR GCA 90 bp ATTTTAAACAGCTTGCATGGCACTGCCTTTTGCCCTTGCATGAACTCCAGGTGGATCCAACAGGACAGATaGAGTCACAGCGTGATCCTT +
Preference number: 4 (lower is better)
Translates to: ILNSLHGTAFCPCMNSRWIQQDR*SHSVIL
Trigger: AAGGATCACGCTGTGACTGCATCTGTCCTGTTGGAT...CCACCTGGAGTTCATGCAAGGGCAAAAGGCAGTGCCATGCAAGCTGTTTAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR GCA 90 bp ATTTTAAACAGCTTGCATGGCACTGCCTTTTGCCCTTGCATGAACTCCAGGTGGACTGCCTTTTGCCCTTaGATGAACTCCAGGTGGAAA +
Preference number: 4 (lower is better)
Translates to: ILNSLHGTAFCPCMNSRWTAFCP*MNSRWK
Trigger: TTTCCACCTGGAGTTCATGCAAGGGCAAAAGGCAGT...CCACCTGGAGTTCATGCAAGGGCAAAAGGCAGTGCCATGCAAGCTGTTTAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR GCA 90 bp AGCTTGCATGGCACTGCCTTTTGCCCTTGCATGAACTCCAGGTGGAAACTGGTGACTGGAAACAGACTTTaGACAGACCAAAAACTTACC +
Preference number: 4 (lower is better)
Translates to: SLHGTAFCPCMNSRWKLVTGNRL*TDQKLT
Trigger: GGTAAGTTTTTGGTCTGTGCAAAGTCTGTTTCCAGT...CACCAGTTTCCACCTGGAGTTCATGCAAGGGCAAAAGGCAGTGCCATGCAAGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000535057.5
ENST00000543257.5
CDS-3UTR CCA 90 bp ATTTTAAACAGCTTGCATGGCACTGCCTTTTGCCCTTGCATGAACTCCAGGTGGTCCACTTCCCATCAATaGGGGTATTCTTCCGATAGG +
Preference number: 4 (lower is better)
Translates to: ILNSLHGTAFCPCMNSRWSTSHQ*GYSSDR
Trigger: CCTATCGGAAGAATACCCCCATTGATGGGAAGTGGA...CCACCTGGAGTTCATGCAAGGGCAAAAGGCAGTGCCATGCAAGCTGTTTAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR CCA 90 bp ATCTTTATTTTAAACAGCTTGCATGGCACTGCCTTTTGCCCTTGCATGAACTCCGGTGTAGGGCTGAGCTaGCATGAGTTCTTGAGGGCT +
Preference number: 4 (lower is better)
Translates to: IFILNSLHGTAFCPCMNSGVGLS*HEFLRA
Trigger: AGCCCTCAAGAACTCATGCCAGCTCAGCCCTACACC...GGAGTTCATGCAAGGGCAAAAGGCAGTGCCATGCAAGCTGTTTAAAATAAAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR CCA 90 bp ATCTTTATTTTAAACAGCTTGCATGGCACTGCCTTTTGCCCTTGCATGAACTCCACTCCAGGTGGAAACTaGTGTAGGGCTGAGCTGGCA +
Preference number: 4 (lower is better)
Translates to: IFILNSLHGTAFCPCMNSTPGGN*CRAELA
Trigger: TGCCAGCTCAGCCCTACACCAGTTTCCACCTGGAGT...GGAGTTCATGCAAGGGCAAAAGGCAGTGCCATGCAAGCTGTTTAAAATAAAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR TCA 90 bp CATCTTTATTTTAAACAGCTTGCATGGCACTGCCTTTTGCCCTTGCATGAACTCCCTTCACATCGCACTTaGCTTCCGCATGGTCTGTTG +
Preference number: 4 (lower is better)
Translates to: HLYFKQLAWHCLLPLHELPSHRT*LPHGLL
Trigger: CAACAGACCATGCGGAAGTCAAGTGCGATGTGAAGG...GAGTTCATGCAAGGGCAAAAGGCAGTGCCATGCAAGCTGTTTAAAATAAAGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR TCA 90 bp AGCTTGCATGGCACTGCCTTTTGCCCTTGCATGAACTCCAGGTGGAAACTGGTGAATACGCTTTTAGTATaGGAGAATCGTTTGGTTCTC +
Preference number: 4 (lower is better)
Translates to: SLHGTAFCPCMNSRWKLVNTLLV*ENRLVL
Trigger: GAGAACCAAACGATTCTCTCATACTAAAAGCGTATT...CACCAGTTTCCACCTGGAGTTCATGCAAGGGCAAAAGGCAGTGCCATGCAAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR TCA 90 bp ATCTTTATTTTAAACAGCTTGCATGGCACTGCCTTTTGCCCTTGCATGAACTCCGGGCTACCCCCATTTTaGGGAGGTGGATTGTTACAC +
Preference number: 4 (lower is better)
Translates to: IFILNSLHGTAFCPCMNSGLPPF*GGGLLH
Trigger: GTGTAACAATCCACCTCCTCAAAATGGGGGTAGCCC...GGAGTTCATGCAAGGGCAAAAGGCAGTGCCATGCAAGCTGTTTAAAATAAAGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR TCA 90 bp CATCTTTATTTTAAACAGCTTGCATGGCACTGCCTTTTGCCCTTGCATGAACTCAACGCCCAGAGAGAGTaGAGGCCAGAGTCATACAAG +
Preference number: 4 (lower is better)
Translates to: HLYFKQLAWHCLLPLHELNAQRE*RPESYK
Trigger: CTTGTATGACTCTGGCCTTCACTCTCTCTGGGCGTT...GAGTTCATGCAAGGGCAAAAGGCAGTGCCATGCAAGCTGTTTAAAATAAAGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535057.5
CDS-3UTR GCA 90 bp TTACAAGGTAACATCTTTATTTTAAACAGCTTGCATGGCACTGCCTTTTGCCCTATGGCTGGGTTGTACTaGACAGCGTCTCCCCACTCC +
Preference number: 4 (lower is better)
Translates to: LQGNIFILNSLHGTAFCPMAGLY*TASPHS
Trigger: GGAGTGGGGAGACGCTGTGCAGTACAACCCAGCCAT...AGGGCAAAAGGCAGTGCCATGCAAGCTGTTTAAAATAAAGATGTTACCTTGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR GCA 90 bp CATCTTTATTTTAAACAGCTTGCATGGCACTGCCTTTTGCCCTTGCATGAACTCCTGGAACTCCTCCAGTaGCTGCTTCATGTTCTGCCT +
Preference number: 4 (lower is better)
Translates to: HLYFKQLAWHCLLPLHELLELLQ*LLHVLP
Trigger: AGGCAGAACATGAAGCAGGCACTGGAGGAGTTCCAG...GAGTTCATGCAAGGGCAAAAGGCAGTGCCATGCAAGCTGTTTAAAATAAAGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR GCA 90 bp ATCTTTATTTTAAACAGCTTGCATGGCACTGCCTTTTGCCCTTGCATGAACTCCCATGGCACTGCCTTTTaGCCTTGCATGAACTCCAGG +
Preference number: 4 (lower is better)
Translates to: IFILNSLHGTAFCPCMNSHGTAF*PCMNSR
Trigger: CCTGGAGTTCATGCAAGGGCAAAAGGCAGTGCCATG...GGAGTTCATGCAAGGGCAAAAGGCAGTGCCATGCAAGCTGTTTAAAATAAAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR GCA 90 bp CATCTTTATTTTAAACAGCTTGCATGGCACTGCCTTTTGCCCTTGCATGAACTCCCCATAACAAGCCTGTaGTGTGAGTGCCACTGTCAG +
Preference number: 4 (lower is better)
Translates to: HLYFKQLAWHCLLPLHELPITSL*CECHCQ
Trigger: CTGACAGTGGCACTCACAGCACAGGCTTGTTATGGG...GAGTTCATGCAAGGGCAAAAGGCAGTGCCATGCAAGCTGTTTAAAATAAAGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000535057.5
ENST00000543257.5
CDS-3UTR CCA 90 bp ATCTTTATTTTAAACAGCTTGCATGGCACTGCCTTTTGCCCTTGCATGAACTCCTCACAGGCTAGGCCTTaGGATCCAACAGGACAGATG +
Preference number: 4 (lower is better)
Translates to: IFILNSLHGTAFCPCMNSSQARP*DPTGQM
Trigger: CATCTGTCCTGTTGGATCCCAAGGCCTAGCCTGTGA...GGAGTTCATGCAAGGGCAAAAGGCAGTGCCATGCAAGCTGTTTAAAATAAAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR TCA 90 bp TTACAAGGTAACATCTTTATTTTAAACAGCTTGCATGGCACTGCCTTTTGCCCTGATGCAGTCACAGCGTaGTCCTTTCAGGACAGGGAC +
Preference number: 4 (lower is better)
Translates to: LQGNIFILNSLHGTAFCPDAVTA*SFQDRD
Trigger: GTCCCTGTCCTGAAAGGATCACGCTGTGACTGCATC...AGGGCAAAAGGCAGTGCCATGCAAGCTGTTTAAAATAAAGATGTTACCTTGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR GCA 90 bp ATTTTAAACAGCTTGCATGGCACTGCCTTTTGCCCTTGCATGAACTCCAGGTGGAGGTCAGAGCGTGCATaGAGAAATACGCTTTTAGTA +
Preference number: 4 (lower is better)
Translates to: ILNSLHGTAFCPCMNSRWRSERA*RNTLLV
Trigger: TACTAAAAGCGTATTTCTGCATGCACGCTCTGACCT...CCACCTGGAGTTCATGCAAGGGCAAAAGGCAGTGCCATGCAAGCTGTTTAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR GCA 90 bp ATTTTAAACAGCTTGCATGGCACTGCCTTTTGCCCTTGCATGAACTCCAGGTGGTTCAAGGTCAGAGCGTaGATGCAGAAATACGCTTTT +
Preference number: 4 (lower is better)
Translates to: ILNSLHGTAFCPCMNSRWFKVRA*MQKYAF
Trigger: AAAAGCGTATTTCTGCATGCACGCTCTGACCTTGAA...CCACCTGGAGTTCATGCAAGGGCAAAAGGCAGTGCCATGCAAGCTGTTTAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR GCA 90 bp ATTTTAAACAGCTTGCATGGCACTGCCTTTTGCCCTTGCATGAACTCCAGGTGGTTTCAGCTTGTAATGTaGTACTTCAAGGTCAGAGCG +
Preference number: 4 (lower is better)
Translates to: ILNSLHGTAFCPCMNSRWFQLVM*YFKVRA
Trigger: CGCTCTGACCTTGAAGTAGCACATTACAAGCTGAAA...CCACCTGGAGTTCATGCAAGGGCAAAAGGCAGTGCCATGCAAGCTGTTTAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR GCA 90 bp CATCTTTATTTTAAACAGCTTGCATGGCACTGCCTTTTGCCCTTGCATGAACTCAACTCCTCCAGTGCCTaGTTCATGTTCTGCCTCACT +
Preference number: 4 (lower is better)
Translates to: HLYFKQLAWHCLLPLHELNSSSA*FMFCLT
Trigger: AGTGAGGCAGAACATGAAGCAGGCACTGGAGGAGTT...GAGTTCATGCAAGGGCAAAAGGCAGTGCCATGCAAGCTGTTTAAAATAAAGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR GCA 90 bp ATTTTAAACAGCTTGCATGGCACTGCCTTTTGCCCTTGCATGAACTCCAGGTGGGGTGGATTGTTACACTaGCTTTGTCTTGTCTTACGT +
Preference number: 4 (lower is better)
Translates to: ILNSLHGTAFCPCMNSRWGGLLH*LCLVLR
Trigger: ACGTAAGACAAGACAAAGGCAGTGTAACAATCCACC...CCACCTGGAGTTCATGCAAGGGCAAAAGGCAGTGCCATGCAAGCTGTTTAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR GCA 90 bp ATCTTTATTTTAAACAGCTTGCATGGCACTGCCTTTTGCCCTTGCATGAACTCCCAGCTTGCATGGCACTaGCTTTTGCCCTTGCATGAA +
Preference number: 4 (lower is better)
Translates to: IFILNSLHGTAFCPCMNSQLAWH*LLPLHE
Trigger: TTCATGCAAGGGCAAAAGGCAGTGCCATGCAAGCTG...GGAGTTCATGCAAGGGCAAAAGGCAGTGCCATGCAAGCTGTTTAAAATAAAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR GCA 90 bp TTACAAGGTAACATCTTTATTTTAAACAGCTTGCATGGCACTGCCTTTTGCCCTAGCCTGTGCTGTGAGTaGCACTGTCAGCTTCTGTCC +
Preference number: 4 (lower is better)
Translates to: LQGNIFILNSLHGTAFCPSLCCE*HCQLLS
Trigger: GGACAGAAGCTGACAGTGGCACTCACAGCACAGGCT...AGGGCAAAAGGCAGTGCCATGCAAGCTGTTTAAAATAAAGATGTTACCTTGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535057.5
ENST00000543257.5
CDS-3UTR CCA 90 bp ATTTTAAACAGCTTGCATGGCACTGCCTTTTGCCCTTGCATGAACTCCAGGTGGTCCAAGCCCATGTCCTaGAATTCTTCATTTTCCCAA +
Preference number: 4 (lower is better)
Translates to: ILNSLHGTAFCPCMNSRWSKPMS*NSSFSQ
Trigger: TTGGGAAAATGAAGAATTCCAGGACATGGGCTTGGA...CCACCTGGAGTTCATGCAAGGGCAAAAGGCAGTGCCATGCAAGCTGTTTAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR CCA 90 bp CATCTTTATTTTAAACAGCTTGCATGGCACTGCCTTTTGCCCTTGCATGAACTCCCAAGTCCTCCACCATaGTGTCCCTCTTGTTTCTGT +
Preference number: 4 (lower is better)
Translates to: HLYFKQLAWHCLLPLHELPSPPP*CPSCFC
Trigger: ACAGAAACAAGAGGGACACCATGGTGGAGGACTTGG...GAGTTCATGCAAGGGCAAAAGGCAGTGCCATGCAAGCTGTTTAAAATAAAGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR CCA 90 bp ATTTTAAACAGCTTGCATGGCACTGCCTTTTGCCCTTGCATGAACTCCAGGTGGAAAGCCACTAGTGACTaGAAACAGACTTTGCACAGA +
Preference number: 4 (lower is better)
Translates to: ILNSLHGTAFCPCMNSRWKATSD*KQTLHR
Trigger: TCTGTGCAAAGTCTGTTTCCAGTCACTAGTGGCTTT...CCACCTGGAGTTCATGCAAGGGCAAAAGGCAGTGCCATGCAAGCTGTTTAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535057.5
ENST00000543257.5
CDS-3UTR TCA 90 bp CATCTTTATTTTAAACAGCTTGCATGGCACTGCCTTTTGCCCTTGCATGAACTCTTCATTTTCCCAATGTaGCAGGAGATGCCACAGAGG +
Preference number: 4 (lower is better)
Translates to: HLYFKQLAWHCLLPLHELFIFPM*QEMPQR
Trigger: CCTCTGTGGCATCTCCTGTCACATTGGGAAAATGAA...GAGTTCATGCAAGGGCAAAAGGCAGTGCCATGCAAGCTGTTTAAAATAAAGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR TCA 90 bp ATCTTTATTTTAAACAGCTTGCATGGCACTGCCTTTTGCCCTTGCATGAACTCCCTTGTTGACTGCATTTaGCCCAAAGGAATGTGGCCT +
Preference number: 4 (lower is better)
Translates to: IFILNSLHGTAFCPCMNSLVDCI*PKGMWP
Trigger: AGGCCACATTCCTTTGGGTCAAATGCAGTCAACAAG...GGAGTTCATGCAAGGGCAAAAGGCAGTGCCATGCAAGCTGTTTAAAATAAAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR GCA 90 bp ATCTTTATTTTAAACAGCTTGCATGGCACTGCCTTTTGCCCTTGCATGAACTCCACACCTTCCTGTCTGTaGACACACAAAGCCTTCACA +
Preference number: 4 (lower is better)
Translates to: IFILNSLHGTAFCPCMNSTPSCL*THKAFT
Trigger: TGTGAAGGCTTTGTGTGTGCACAGACAGGAAGGTGT...GGAGTTCATGCAAGGGCAAAAGGCAGTGCCATGCAAGCTGTTTAAAATAAAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR GCA 90 bp CATCTTTATTTTAAACAGCTTGCATGGCACTGCCTTTTGCCCTTGCATGAACTCGAATACCTCTGCATTTaGCTACAGACACACCCAGAC +
Preference number: 4 (lower is better)
Translates to: HLYFKQLAWHCLLPLHELEYLCI*LQTHPD
Trigger: GTCTGGGTGTGTCTGTAGGCAAATGCAGAGGTATTC...GAGTTCATGCAAGGGCAAAAGGCAGTGCCATGCAAGCTGTTTAAAATAAAGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR GCA 90 bp CATCTTTATTTTAAACAGCTTGCATGGCACTGCCTTTTGCCCTTGCATGAACTCACTGCCTTTTGCCCTTaGATGAACTCCAGGTGGAAA +
Preference number: 4 (lower is better)
Translates to: HLYFKQLAWHCLLPLHELTAFCP*MNSRWK
Trigger: TTTCCACCTGGAGTTCATGCAAGGGCAAAAGGCAGT...GAGTTCATGCAAGGGCAAAAGGCAGTGCCATGCAAGCTGTTTAAAATAAAGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR CCA 90 bp ATCTTTATTTTAAACAGCTTGCATGGCACTGCCTTTTGCCCTTGCATGAACTCCCACTTGACTTCCGCATaGTCTGTTGGTAACACAGTC +
Preference number: 4 (lower is better)
Translates to: IFILNSLHGTAFCPCMNSHLTSA*SVGNTV
Trigger: GACTGTGTTACCAACAGACCATGCGGAAGTCAAGTG...GGAGTTCATGCAAGGGCAAAAGGCAGTGCCATGCAAGCTGTTTAAAATAAAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR CCA 90 bp CATCTTTATTTTAAACAGCTTGCATGGCACTGCCTTTTGCCCTTGCATGAACTCCACTTGACTTCCGCATaGTCTGTTGGTAACACAGTC +
Preference number: 4 (lower is better)
Translates to: HLYFKQLAWHCLLPLHELHLTSA*SVGNTV
Trigger: GACTGTGTTACCAACAGACCATGCGGAAGTCAAGTG...GAGTTCATGCAAGGGCAAAAGGCAGTGCCATGCAAGCTGTTTAAAATAAAGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR CCA 90 bp CATCTTTATTTTAAACAGCTTGCATGGCACTGCCTTTTGCCCTTGCATGAACTCTTTGCCTTGGGTCTGTaGCGTGTAGCTTTCCACATT +
Preference number: 4 (lower is better)
Translates to: HLYFKQLAWHCLLPLHELFALGL*RVAFHI
Trigger: AATGTGGAAAGCTACACGCCACAGACCCAAGGCAAA...GAGTTCATGCAAGGGCAAAAGGCAGTGCCATGCAAGCTGTTTAAAATAAAGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR CCA 90 bp ATCTTTATTTTAAACAGCTTGCATGGCACTGCCTTTTGCCCTTGCATGAACTCCTTTGCCTTGGGTCTGTaGCGTGTAGCTTTCCACATT +
Preference number: 4 (lower is better)
Translates to: IFILNSLHGTAFCPCMNSFALGL*RVAFHI
Trigger: AATGTGGAAAGCTACACGCCACAGACCCAAGGCAAA...GGAGTTCATGCAAGGGCAAAAGGCAGTGCCATGCAAGCTGTTTAAAATAAAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR CCA 90 bp CATCTTTATTTTAAACAGCTTGCATGGCACTGCCTTTTGCCCTTGCATGAACTCTCCACTTCCCATCAATaGGGGTATTCTTCCGATAGG +
Preference number: 4 (lower is better)
Translates to: HLYFKQLAWHCLLPLHELSTSHQ*GYSSDR
Trigger: CCTATCGGAAGAATACCCCCATTGATGGGAAGTGGA...GAGTTCATGCAAGGGCAAAAGGCAGTGCCATGCAAGCTGTTTAAAATAAAGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
3UTR CAA 72 bp CATCTTTATTTTAAACAGCTTGCATGGCACTGCCTTTaGCCCTTGCATGAACTCCAGGTGGAAACTGGTGTA +
Preference number: 4 (lower is better)
Translates to: HLYFKQLAWHCL*PLHELQVETGV
Trigger: TACACCAGTTTCCACCTGGAGTTCATGCAAGGGCAAAAGGCAGTGCCATGCAAGCTGTTTAAAATAAAGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR TCA 90 bp ATCTTTATTTTAAACAGCTTGCATGGCACTGCCTTTTGCCCTTGCATGAACTCCTTGCCTCGATCACTTTaGCTACTGATGCCAAGTTCA +
Preference number: 4 (lower is better)
Translates to: IFILNSLHGTAFCPCMNSLPRSL*LLMPSS
Trigger: TGAACTTGGCATCAGTAGTCAAAGTGATCGAGGCAA...GGAGTTCATGCAAGGGCAAAAGGCAGTGCCATGCAAGCTGTTTAAAATAAAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR TCA 90 bp ATTTTAAACAGCTTGCATGGCACTGCCTTTTGCCCTTGCATGAACTCCAGGTGGAATACGCTTTTAGTATaGGAGAATCGTTTGGTTCTC +
Preference number: 4 (lower is better)
Translates to: ILNSLHGTAFCPCMNSRWNTLLV*ENRLVL
Trigger: GAGAACCAAACGATTCTCTCATACTAAAAGCGTATT...CCACCTGGAGTTCATGCAAGGGCAAAAGGCAGTGCCATGCAAGCTGTTTAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR TCA 90 bp TTACAAGGTAACATCTTTATTTTAAACAGCTTGCATGGCACTGCCTTTTGCCCTCAAGCACAGCCTCTGTaGTGTAGTGGGTCCCAAAAT +
Preference number: 4 (lower is better)
Translates to: LQGNIFILNSLHGTAFCPQAQPL*CSGSQN
Trigger: ATTTTGGGACCCACTACATCACAGAGGCTGTGCTTG...AGGGCAAAAGGCAGTGCCATGCAAGCTGTTTAAAATAAAGATGTTACCTTGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR GCA 90 bp TTACAAGGTAACATCTTTATTTTAAACAGCTTGCATGGCACTGCCTTTTGCCCTCCTTGTCAGAGAAGTTaGACGGTTCCCCATGGAACT +
Preference number: 4 (lower is better)
Translates to: LQGNIFILNSLHGTAFCPPCQRS*TVPHGT
Trigger: AGTTCCATGGGGAACCGTGCAACTTCTCTGACAAGG...AGGGCAAAAGGCAGTGCCATGCAAGCTGTTTAAAATAAAGATGTTACCTTGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR GCA 90 bp ATCTTTATTTTAAACAGCTTGCATGGCACTGCCTTTTGCCCTTGCATGAACTCCCATTGCAAAGAAGTCTaGGGTTTACACACCTTCCTG +
Preference number: 4 (lower is better)
Translates to: IFILNSLHGTAFCPCMNSHCKEV*GLHTFL
Trigger: CAGGAAGGTGTGTAAACCGCAGACTTCTTTGCAATG...GGAGTTCATGCAAGGGCAAAAGGCAGTGCCATGCAAGCTGTTTAAAATAAAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR GCA 90 bp TTACAAGGTAACATCTTTATTTTAAACAGCTTGCATGGCACTGCCTTTTGCCCTCGGGGAGCATCCACCTaGATAATACCTGTGATCAAG +
Preference number: 4 (lower is better)
Translates to: LQGNIFILNSLHGTAFCPRGAST*IIPVIK
Trigger: CTTGATCACAGGTATTATGCAGGTGGATGCTCCCCG...AGGGCAAAAGGCAGTGCCATGCAAGCTGTTTAAAATAAAGATGTTACCTTGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR GCA 90 bp TTACAAGGTAACATCTTTATTTTAAACAGCTTGCATGGCACTGCCTTTTGCCCTGGGTGTATTCATAAATaGCCCCAAGCACAGCCTCTG +
Preference number: 4 (lower is better)
Translates to: LQGNIFILNSLHGTAFCPGCIHK*PQAQPL
Trigger: CAGAGGCTGTGCTTGGGGGCATTTATGAATACACCC...AGGGCAAAAGGCAGTGCCATGCAAGCTGTTTAAAATAAAGATGTTACCTTGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR GCA 90 bp ATCTTTATTTTAAACAGCTTGCATGGCACTGCCTTTTGCCCTTGCATGAACTCCTGTTCTGCCTCACTGTaGTGGAATAGGCAAAATCTG +
Preference number: 4 (lower is better)
Translates to: IFILNSLHGTAFCPCMNSCSASL*WNRQNL
Trigger: CAGATTTTGCCTATTCCAGCACAGTGAGGCAGAACA...GGAGTTCATGCAAGGGCAAAAGGCAGTGCCATGCAAGCTGTTTAAAATAAAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR GCA 90 bp TTACAAGGTAACATCTTTATTTTAAACAGCTTGCATGGCACTGCCTTTTGCCCTCAGCTTGCATGGCACTaGCTTTTGCCCTTGCATGAA +
Preference number: 4 (lower is better)
Translates to: LQGNIFILNSLHGTAFCPQLAWH*LLPLHE
Trigger: TTCATGCAAGGGCAAAAGGCAGTGCCATGCAAGCTG...AGGGCAAAAGGCAGTGCCATGCAAGCTGTTTAAAATAAAGATGTTACCTTGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR CCA 90 bp ATCTTTATTTTAAACAGCTTGCATGGCACTGCCTTTTGCCCTTGCATGAACTCCCCTGTGATCAAGAACTaGGCCCTCAAAACTGTTTGT +
Preference number: 4 (lower is better)
Translates to: IFILNSLHGTAFCPCMNSPVIKN*ALKTVC
Trigger: ACAAACAGTTTTGAGGGCCCAGTTCTTGATCACAGG...GGAGTTCATGCAAGGGCAAAAGGCAGTGCCATGCAAGCTGTTTAAAATAAAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR CCA 90 bp ATTTTAAACAGCTTGCATGGCACTGCCTTTTGCCCTTGCATGAACTCCAGGTGGAATAGGCAAAATCTGTaGCTGTCACTAGTTCATACA +
Preference number: 4 (lower is better)
Translates to: ILNSLHGTAFCPCMNSRWNRQNL*LSLVHT
Trigger: TGTATGAACTAGTGACAGCCACAGATTTTGCCTATT...CCACCTGGAGTTCATGCAAGGGCAAAAGGCAGTGCCATGCAAGCTGTTTAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR CCA 90 bp CATCTTTATTTTAAACAGCTTGCATGGCACTGCCTTTTGCCCTTGCATGAACTCTTTAAACAGCTTGCATaGCACTGCCTTTTGCCCTTG +
Preference number: 4 (lower is better)
Translates to: HLYFKQLAWHCLLPLHELFKQLA*HCLLPL
Trigger: CAAGGGCAAAAGGCAGTGCCATGCAAGCTGTTTAAA...GAGTTCATGCAAGGGCAAAAGGCAGTGCCATGCAAGCTGTTTAAAATAAAGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR CCA 90 bp ATCTTTATTTTAAACAGCTTGCATGGCACTGCCTTTTGCCCTTGCATGAACTCCGTGGCCTTTCACCTCTaGAATAGCTGTGAGGATTAT +
Preference number: 4 (lower is better)
Translates to: IFILNSLHGTAFCPCMNSVAFHL*NSCEDY
Trigger: ATAATCCTCACAGCTATTCCAGAGGTGAAAGGCCAC...GGAGTTCATGCAAGGGCAAAAGGCAGTGCCATGCAAGCTGTTTAAAATAAAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543257.5
CDS-3UTR GCA 90 bp ATCTTTATTTTAAACAGCTTGCATGGCACTGCCTTTTGCCCTTGCATGAACTCCAGGTCAGAGCGTGCATaGAGAAATACGCTTTTAGTA +
Preference number: 4 (lower is better)
Translates to: IFILNSLHGTAFCPCMNSRSERA*RNTLLV
Trigger: TACTAAAAGCGTATTTCTGCATGCACGCTCTGACCT...GGAGTTCATGCAAGGGCAAAAGGCAGTGCCATGCAAGCTGTTTAAAATAAAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR CCA 90 bp TTACAAGGTAACATCTTTATTTTAAACAGCTTGCATGGCACTGCCTTTTGCCCTACAAATTTATCCCACTaGCCAGACTGCCAATTCCCC +
Preference number: 4 (lower is better)
Translates to: LQGNIFILNSLHGTAFCPTNLSH*PDCQFP
Trigger: GGGGAATTGGCAGTCTGGCCAGTGGGATAAATTTGT...AGGGCAAAAGGCAGTGCCATGCAAGCTGTTTAAAATAAAGATGTTACCTTGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR CCA 90 bp TTACAAGGTAACATCTTTATTTTAAACAGCTTGCATGGCACTGCCTTTTGCCCTTCTGCCTCACTGTGCTaGAATAGGCAAAATCTGTGG +
Preference number: 4 (lower is better)
Translates to: LQGNIFILNSLHGTAFCPSASLC*NRQNLW
Trigger: CCACAGATTTTGCCTATTCCAGCACAGTGAGGCAGA...AGGGCAAAAGGCAGTGCCATGCAAGCTGTTTAAAATAAAGATGTTACCTTGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR CCA 90 bp CATCTTTATTTTAAACAGCTTGCATGGCACTGCCTTTTGCCCTTGCATGAACTCAAGTGTCCATTGTGCTaGAAATGTAGGCTAGATTCG +
Preference number: 4 (lower is better)
Translates to: HLYFKQLAWHCLLPLHELKCPLC*KCRLDS
Trigger: CGAATCTAGCCTACATTTCCAGCACAATGGACACTT...GAGTTCATGCAAGGGCAAAAGGCAGTGCCATGCAAGCTGTTTAAAATAAAGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535057.5
CDS-3UTR TCA 90 bp ATCTTTATTTTAAACAGCTTGCATGGCACTGCCTTTTGCCCTTGCATGAACTCCCCTCAAAACTGTTTGTaGACAAATTTATCCCACTGG +
Preference number: 4 (lower is better)
Translates to: IFILNSLHGTAFCPCMNSPQNCL*TNLSHW
Trigger: CCAGTGGGATAAATTTGTTCACAAACAGTTTTGAGG...GGAGTTCATGCAAGGGCAAAAGGCAGTGCCATGCAAGCTGTTTAAAATAAAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR TCA 90 bp TTACAAGGTAACATCTTTATTTTAAACAGCTTGCATGGCACTGCCTTTTGCCCTTTGCCTCGATCACTTTaGCTACTGATGCCAAGTTCA +
Preference number: 4 (lower is better)
Translates to: LQGNIFILNSLHGTAFCPLPRSL*LLMPSS
Trigger: TGAACTTGGCATCAGTAGTCAAAGTGATCGAGGCAA...AGGGCAAAAGGCAGTGCCATGCAAGCTGTTTAAAATAAAGATGTTACCTTGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR GCA 90 bp TTACAAGGTAACATCTTTATTTTAAACAGCTTGCATGGCACTGCCTTTTGCCCTCATTGCAAAGAAGTCTaGGGTTTACACACCTTCCTG +
Preference number: 4 (lower is better)
Translates to: LQGNIFILNSLHGTAFCPHCKEV*GLHTFL
Trigger: CAGGAAGGTGTGTAAACCGCAGACTTCTTTGCAATG...AGGGCAAAAGGCAGTGCCATGCAAGCTGTTTAAAATAAAGATGTTACCTTGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR GCA 90 bp ATCTTTATTTTAAACAGCTTGCATGGCACTGCCTTTTGCCCTTGCATGAACTCCGAAACCAGACTTGCTTaGCATTTTCTCTGTGACATT +
Preference number: 4 (lower is better)
Translates to: IFILNSLHGTAFCPCMNSETRLA*HFLCDI
Trigger: AATGTCACAGAGAAAATGGCAAGCAAGTCTGGTTTC...GGAGTTCATGCAAGGGCAAAAGGCAGTGCCATGCAAGCTGTTTAAAATAAAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR GCA 90 bp ATCTTTATTTTAAACAGCTTGCATGGCACTGCCTTTTGCCCTTGCATGAACTCCACTGGAAACAGACTTTaGACAGACCAAAAACTTACC +
Preference number: 4 (lower is better)
Translates to: IFILNSLHGTAFCPCMNSTGNRL*TDQKLT
Trigger: GGTAAGTTTTTGGTCTGTGCAAAGTCTGTTTCCAGT...GGAGTTCATGCAAGGGCAAAAGGCAGTGCCATGCAAGCTGTTTAAAATAAAGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000535057.5
ENST00000543257.5
CDS-3UTR CCA 90 bp TTACAAGGTAACATCTTTATTTTAAACAGCTTGCATGGCACTGCCTTTTGCCCTCCTGTGATCAAGAACTaGGCCCTCAAAACTGTTTGT +
Preference number: 4 (lower is better)
Translates to: LQGNIFILNSLHGTAFCPPVIKN*ALKTVC
Trigger: ACAAACAGTTTTGAGGGCCCAGTTCTTGATCACAGG...AGGGCAAAAGGCAGTGCCATGCAAGCTGTTTAAAATAAAGATGTTACCTTGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR GCA 90 bp TTACAAGGTAACATCTTTATTTTAAACAGCTTGCATGGCACTGCCTTTTGCCCTAGGTCAGAGCGTGCATaGAGAAATACGCTTTTAGTA +
Preference number: 4 (lower is better)
Translates to: LQGNIFILNSLHGTAFCPRSERA*RNTLLV
Trigger: TACTAAAAGCGTATTTCTGCATGCACGCTCTGACCT...AGGGCAAAAGGCAGTGCCATGCAAGCTGTTTAAAATAAAGATGTTACCTTGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR GCA 90 bp TTACAAGGTAACATCTTTATTTTAAACAGCTTGCATGGCACTGCCTTTTGCCCTTTTCAGCTTGTAATGTaGTACTTCAAGGTCAGAGCG +
Preference number: 4 (lower is better)
Translates to: LQGNIFILNSLHGTAFCPFQLVM*YFKVRA
Trigger: CGCTCTGACCTTGAAGTAGCACATTACAAGCTGAAA...AGGGCAAAAGGCAGTGCCATGCAAGCTGTTTAAAATAAAGATGTTACCTTGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR GCA 90 bp TTACAAGGTAACATCTTTATTTTAAACAGCTTGCATGGCACTGCCTTTTGCCCTGGTGGATTGTTACACTaGCTTTGTCTTGTCTTACGT +
Preference number: 4 (lower is better)
Translates to: LQGNIFILNSLHGTAFCPGGLLH*LCLVLR
Trigger: ACGTAAGACAAGACAAAGGCAGTGTAACAATCCACC...AGGGCAAAAGGCAGTGCCATGCAAGCTGTTTAAAATAAAGATGTTACCTTGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR GCA 90 bp TTACAAGGTAACATCTTTATTTTAAACAGCTTGCATGGCACTGCCTTTTGCCCTCTAATGTTTCCAAGTTaGTGGCACAGAGTGGCAATA +
Preference number: 4 (lower is better)
Translates to: LQGNIFILNSLHGTAFCPLMFPS*WHRVAI
Trigger: TATTGCCACTCTGTGCCAGCAACTTGGAAACATTAG...AGGGCAAAAGGCAGTGCCATGCAAGCTGTTTAAAATAAAGATGTTACCTTGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543257.5
CDS-3UTR TCA 90 bp TTACAAGGTAACATCTTTATTTTAAACAGCTTGCATGGCACTGCCTTTTGCCCTGATCACTTTGACTACTaGTGCCAAGTTCAAATATTC +
Preference number: 4 (lower is better)
Translates to: LQGNIFILNSLHGTAFCPDHFDY*CQVQIF
Trigger: GAATATTTGAACTTGGCATCAGTAGTCAAAGTGATC...AGGGCAAAAGGCAGTGCCATGCAAGCTGTTTAAAATAAAGATGTTACCTTGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR CCA 90 bp TTACAAGGTAACATCTTTATTTTAAACAGCTTGCATGGCACTGCCTTTTGCCCTAATAGGCAAAATCTGTaGCTGTCACTAGTTCATACA +
Preference number: 4 (lower is better)
Translates to: LQGNIFILNSLHGTAFCPNRQNL*LSLVHT
Trigger: TGTATGAACTAGTGACAGCCACAGATTTTGCCTATT...AGGGCAAAAGGCAGTGCCATGCAAGCTGTTTAAAATAAAGATGTTACCTTGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS GCA 90 bp GTCTCCCCACTCCTGCATCAGGTCCGCCGTCGGCAGCTCCTGGTATaGCAGGGTGGTGATGTGCTCACTTGCCCCTCCTCGTACCAGGAC +
Preference number: 5 (lower is better)
Translates to: VSPLLHQVRRRQLLV*QGGDVLTCPSSYQD
Trigger: GTCCTGGTACGAGGAGGGGCAAGTGAGCACATCACCACCCTGGCATACCAGGAGCTGCCGACGGCGGACCTGATGCAGGAGTGGGGAGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS CCA 90 bp ACAGCGTCTCCCCACTCCTGCATCAGGTCCGCCGTCGGCAGCTCCTaGTATGCCAGGGTGGTGATGTGCTCACTTGCCCCTCCTCGTACC +
Preference number: 5 (lower is better)
Translates to: TASPHSCIRSAVGSS*YARVVMCSLAPPRT
Trigger: GGTACGAGGAGGGGCAAGTGAGCACATCACCACCCTGGCATACCAGGAGCTGCCGACGGCGGACCTGATGCAGGAGTGGGGAGACGCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS TCA 90 bp CCTGCATCAGGTCCGCCGTCGGCAGCTCCTGGTATGCCAGGGTGGTaGTGTGCTCACTTGCCCCTCCTCGTACCAGGACCACCAAGTCCT +
Preference number: 5 (lower is better)
Translates to: PASGPPSAAPGMPGW*CAHLPLLVPGPPSP
Trigger: AGGACTTGGTGGTCCTGGTACGAGGAGGGGCAAGTGAGCACATCACCACCCTGGCATACCAGGAGCTGCCGACGGCGGACCTGATGCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS GCA 90 bp CGCCGTCGGCAGCTCCTGGTATGCCAGGGTGGTGATGTGCTCACTTaGCCCTCCTCGTACCAGGACCACCAAGTCCTCCACCATGGTGTC +
Preference number: 5 (lower is better)
Translates to: RRRQLLVCQGGDVLT*PSSYQDHQVLHHGV
Trigger: GACACCATGGTGGAGGACTTGGTGGTCCTGGTACGAGGAGGGGCAAGTGAGCACATCACCACCCTGGCATACCAGGAGCTGCCGACGGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS GCA 90 bp ATCAGGTCCGCCGTCGGCAGCTCCTGGTATGCCAGGGTGGTGATGTaGTCACTTGCCCCTCCTCGTACCAGGACCACCAAGTCCTCCACC +
Preference number: 5 (lower is better)
Translates to: IRSAVGSSWYARVVM*SLAPPRTRTTKSST
Trigger: GGTGGAGGACTTGGTGGTCCTGGTACGAGGAGGGGCAAGTGAGCACATCACCACCCTGGCATACCAGGAGCTGCCGACGGCGGACCTGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS GCA 90 bp ACTTTGATGATGGCTGGGTTGTACTGCACAGCGTCTCCCCACTCCTaGATCAGGTCCGCCGTCGGCAGCTCCTGGTATGCCAGGGTGGTG +
Preference number: 5 (lower is better)
Translates to: TLMMAGLYCTASPHS*IRSAVGSSWYARVV
Trigger: CACCACCCTGGCATACCAGGAGCTGCCGACGGCGGACCTGATGCAGGAGTGGGGAGACGCTGTGCAGTACAACCCAGCCATCATCAAAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS GCA 90 bp TCATACAGAGGCTCCACCTTAACTTTGATGATGGCTGGGTTGTACTaGACAGCGTCTCCCCACTCCTGCATCAGGTCCGCCGTCGGCAGC +
Preference number: 5 (lower is better)
Translates to: SYRGSTLTLMMAGLY*TASPHSCIRSAVGS
Trigger: GCTGCCGACGGCGGACCTGATGCAGGAGTGGGGAGACGCTGTGCAGTACAACCCAGCCATCATCAAAGTTAAGGTGGAGCCTCTGTATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR CAA 90 bp CCCTTGCATGAACTCCAGGTGGAAACTGGTGTAGGGCTGAGCTGGCATGAGTTCTTGATGATGGCTGGGTaGTACTGCACAGCGTCTCCC +
Preference number: 5 (lower is better)
Translates to: PLHELQVETGVGLSWHEFLMMAG*YCTASP
Trigger: GGGAGACGCTGTGCAGTACAACCCAGCCATCATCAA...GAACTCATGCCAGCTCAGCCCTACACCAGTTTCCACCTGGAGTTCATGCAAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR CAA 90 bp CCCTTGCATGAACTCCAGGTGGAAACTGGTGTAGGGCTGAGCTGGCATGAGTTCGGCTCAGGGCTCTCATaGTATGTAGCCCACTGCTGT +
Preference number: 5 (lower is better)
Translates to: PLHELQVETGVGLSWHEFGSGLS*YVAHCC
Trigger: ACAGCAGTGGGCTACATACAATGAGAGCCCTGAGCC...GAACTCATGCCAGCTCAGCCCTACACCAGTTTCCACCTGGAGTTCATGCAAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR CAA 90 bp TTGCCCTTGCATGAACTCCAGGTGGAAACTGGTGTAGGGCTGAGCTGGCATGAGAGCTGGCATGAGTTCTaGAGGGCTCAGGGCTCTCAT +
Preference number: 5 (lower is better)
Translates to: LPLHELQVETGVGLSWHESWHEF*RAQGSH
Trigger: ATGAGAGCCCTGAGCCCTCAAGAACTCATGCCAGCT...CTCATGCCAGCTCAGCCCTACACCAGTTTCCACCTGGAGTTCATGCAAGGGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR CAA 90 bp TGCCTTTTGCCCTTGCATGAACTCCAGGTGGAAACTGGTGTAGGGCTGAGCTGGGCATGGCACTGCCTTTaGCCCTTGCATGAACTCCAG +
Preference number: 5 (lower is better)
Translates to: CLLPLHELQVETGVGLSWAWHCL*PLHELQ
Trigger: CTGGAGTTCATGCAAGGGCAAAAGGCAGTGCCATGC...CCAGCTCAGCCCTACACCAGTTTCCACCTGGAGTTCATGCAAGGGCAAAAGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR CAA 90 bp TTGCCCTTGCATGAACTCCAGGTGGAAACTGGTGTAGGGCTGAGCTGGCATGAGGCATGGCACTGCCTTTaGCCCTTGCATGAACTCCAG +
Preference number: 5 (lower is better)
Translates to: LPLHELQVETGVGLSWHEAWHCL*PLHELQ
Trigger: CTGGAGTTCATGCAAGGGCAAAAGGCAGTGCCATGC...CTCATGCCAGCTCAGCCCTACACCAGTTTCCACCTGGAGTTCATGCAAGGGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS GCA 90 bp GTGACAGGAGATGCCACAGAGGCTGCTAGACCCATAACAAGCCTGTaGTGTGAGTGCCACTGTCAGCTTCTGTCCCCAAGAGCAAATAGC +
Preference number: 5 (lower is better)
Translates to: VTGDATEAARPITSL*CECHCQLLSPRANS
Trigger: GCTATTTGCTCTTGGGGACAGAAGCTGACAGTGGCACTCACAGCACAGGCTTGTTATGGGTCTAGCAGCCTCTGTGGCATCTCCTGTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000468990.1
ENST00000494324.1
ENST00000535057.5
ENST00000543257.5
CDS-3UTR CAA 90 bp TTGCCCTTGCATGAACTCCAGGTGGAAACTGGTGTAGGGCTGAGCTGGCATGAGTCCTTGTCAGAGAAGTaGCACGGTTCCCCATGGAAC +
Preference number: 5 (lower is better)
Translates to: LPLHELQVETGVGLSWHESLSEK*HGSPWN
Trigger: GTTCCATGGGGAACCGTGCAACTTCTCTGACAAGGA...CTCATGCCAGCTCAGCCCTACACCAGTTTCCACCTGGAGTTCATGCAAGGGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR CAA 90 bp CCCTTGCATGAACTCCAGGTGGAAACTGGTGTAGGGCTGAGCTGGCATGAGTTCGCCTTCACATCGCACTaGACTTCCGCATGGTCTGTT +
Preference number: 5 (lower is better)
Translates to: PLHELQVETGVGLSWHEFAFTSH*TSAWSV
Trigger: AACAGACCATGCGGAAGTCAAGTGCGATGTGAAGGC...GAACTCATGCCAGCTCAGCCCTACACCAGTTTCCACCTGGAGTTCATGCAAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR CAA 90 bp TGCCTTTTGCCCTTGCATGAACTCCAGGTGGAAACTGGTGTAGGGCTGAGCTGGGCCTTCACATCGCACTaGACTTCCGCATGGTCTGTT +
Preference number: 5 (lower is better)
Translates to: CLLPLHELQVETGVGLSWAFTSH*TSAWSV
Trigger: AACAGACCATGCGGAAGTCAAGTGCGATGTGAAGGC...CCAGCTCAGCCCTACACCAGTTTCCACCTGGAGTTCATGCAAGGGCAAAAGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR CAA 90 bp TTGCCCTTGCATGAACTCCAGGTGGAAACTGGTGTAGGGCTGAGCTGGCATGAGGGGGCTACCCCCATTTaGAGGAGGTGGATTGTTACA +
Preference number: 5 (lower is better)
Translates to: LPLHELQVETGVGLSWHEGATPI*RRWIVT
Trigger: TGTAACAATCCACCTCCTCAAAATGGGGGTAGCCCC...CTCATGCCAGCTCAGCCCTACACCAGTTTCCACCTGGAGTTCATGCAAGGGCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR CAA 90 bp CCCTTGCATGAACTCCAGGTGGAAACTGGTGTAGGGCTGAGCTGGCATGAGTTCGGGGCTACCCCCATTTaGAGGAGGTGGATTGTTACA +
Preference number: 5 (lower is better)
Translates to: PLHELQVETGVGLSWHEFGATPI*RRWIVT
Trigger: TGTAACAATCCACCTCCTCAAAATGGGGGTAGCCCC...GAACTCATGCCAGCTCAGCCCTACACCAGTTTCCACCTGGAGTTCATGCAAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR CAA 90 bp AGCTTGCATGGCACTGCCTTTTGCCCTTGCATGAACTCCAGGTGGAAACTGGTGAGCTGGCATGAGTTCTaGAGGGCTCAGGGCTCTCAT +
Preference number: 5 (lower is better)
Translates to: SLHGTAFCPCMNSRWKLVSWHEF*RAQGSH
Trigger: ATGAGAGCCCTGAGCCCTCAAGAACTCATGCCAGCT...CACCAGTTTCCACCTGGAGTTCATGCAAGGGCAAAAGGCAGTGCCATGCAAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR CAA 90 bp TTGCCCTTGCATGAACTCCAGGTGGAAACTGGTGTAGGGCTGAGCTGGCATGAGCACTGCCTTTTGCCCTaGCATGAACTCCAGGTGGAA +
Preference number: 5 (lower is better)
Translates to: LPLHELQVETGVGLSWHEHCLLP*HELQVE
Trigger: TTCCACCTGGAGTTCATGCAAGGGCAAAAGGCAGTG...CTCATGCCAGCTCAGCCCTACACCAGTTTCCACCTGGAGTTCATGCAAGGGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR CAA 90 bp CCCTTGCATGAACTCCAGGTGGAAACTGGTGTAGGGCTGAGCTGGCATGAGTTCCACTGCCTTTTGCCCTaGCATGAACTCCAGGTGGAA +
Preference number: 5 (lower is better)
Translates to: PLHELQVETGVGLSWHEFHCLLP*HELQVE
Trigger: TTCCACCTGGAGTTCATGCAAGGGCAAAAGGCAGTG...GAACTCATGCCAGCTCAGCCCTACACCAGTTTCCACCTGGAGTTCATGCAAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS CCA 90 bp CACAGAGAAGAAATAGCTCCACCGGCGCCCTCCAAGCCCATGTCCTaGAATTCTTCATTTTCCCAATGTGACAGGAGATGCCACAGAGGC +
Preference number: 5 (lower is better)
Translates to: HREEIAPPAPSKPMS*NSSFSQCDRRCHRG
Trigger: GCCTCTGTGGCATCTCCTGTCACATTGGGAAAATGAAGAATTCCAGGACATGGGCTTGGAGGGCGCCGGTGGAGCTATTTCTTCTCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371237.9
ENST00000468990.1
ENST00000494324.1
ENST00000535057.5
ENST00000543257.5
CDS-3UTR CAA 90 bp AGCTTGCATGGCACTGCCTTTTGCCCTTGCATGAACTCCAGGTGGAAACTGGTGTCCTTGTCAGAGAAGTaGCACGGTTCCCCATGGAAC +
Preference number: 5 (lower is better)
Translates to: SLHGTAFCPCMNSRWKLVSLSEK*HGSPWN
Trigger: GTTCCATGGGGAACCGTGCAACTTCTCTGACAAGGA...CACCAGTTTCCACCTGGAGTTCATGCAAGGGCAAAAGGCAGTGCCATGCAAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR CAA 90 bp TGCCTTTTGCCCTTGCATGAACTCCAGGTGGAAACTGGTGTAGGGCTGAGCTGGCAGTCTTCGACTTCCTaGTCAGAGAAGTTGCACGGT +
Preference number: 5 (lower is better)
Translates to: CLLPLHELQVETGVGLSWQSSTS*SEKLHG
Trigger: ACCGTGCAACTTCTCTGACAAGGAAGTCGAAGACTG...CCAGCTCAGCCCTACACCAGTTTCCACCTGGAGTTCATGCAAGGGCAAAAGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR CAA 90 bp CCCTTGCATGAACTCCAGGTGGAAACTGGTGTAGGGCTGAGCTGGCATGAGTTCGAATTCGTATTTGCCTaGGGTCTGTGGCGTGTAGCT +
Preference number: 5 (lower is better)
Translates to: PLHELQVETGVGLSWHEFEFVFA*GLWRVA
Trigger: AGCTACACGCCACAGACCCAAGGCAAATACGAATTC...GAACTCATGCCAGCTCAGCCCTACACCAGTTTCCACCTGGAGTTCATGCAAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR CAA 90 bp TTGCCCTTGCATGAACTCCAGGTGGAAACTGGTGTAGGGCTGAGCTGGCATGAGGGCTCCACCTTAACTTaGATGATGGCTGGGTTGTAC +
Preference number: 5 (lower is better)
Translates to: LPLHELQVETGVGLSWHEGSTLT*MMAGLY
Trigger: GTACAACCCAGCCATCATCAAAGTTAAGGTGGAGCC...CTCATGCCAGCTCAGCCCTACACCAGTTTCCACCTGGAGTTCATGCAAGGGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS GCA 90 bp GGGAGCACAGTGGCAGGAACTAACTTCCTTCTGGAACTCCTCCAGTaGCTGCTTCATGTTCTGCCTCACTGTGCTGGAATAGGCAAAATC +
Preference number: 5 (lower is better)
Translates to: GSTVAGTNFLLELLQ*LLHVLPHCAGIGKI
Trigger: GATTTTGCCTATTCCAGCACAGTGAGGCAGAACATGAAGCAGGCACTGGAGGAGTTCCAGAAGGAAGTTAGTTCCTGCCACTGTGCTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR CAA 90 bp AGCTTGCATGGCACTGCCTTTTGCCCTTGCATGAACTCCAGGTGGAAACTGGTGCAGTCTTCGACTTCCTaGTCAGAGAAGTTGCACGGT +
Preference number: 5 (lower is better)
Translates to: SLHGTAFCPCMNSRWKLVQSSTS*SEKLHG
Trigger: ACCGTGCAACTTCTCTGACAAGGAAGTCGAAGACTG...CACCAGTTTCCACCTGGAGTTCATGCAAGGGCAAAAGGCAGTGCCATGCAAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR CAA 90 bp AGCTTGCATGGCACTGCCTTTTGCCCTTGCATGAACTCCAGGTGGAAACTGGTGCTTCCGCATGGTCTGTaGGTAACACAGTCTTCGACT +
Preference number: 5 (lower is better)
Translates to: SLHGTAFCPCMNSRWKLVLPHGL*VTQSST
Trigger: AGTCGAAGACTGTGTTACCAACAGACCATGCGGAAG...CACCAGTTTCCACCTGGAGTTCATGCAAGGGCAAAAGGCAGTGCCATGCAAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR CAA 90 bp TGCCTTTTGCCCTTGCATGAACTCCAGGTGGAAACTGGTGTAGGGCTGAGCTGGCAGTCATTGTCCCCATaGCAAAGAAGTCTGCGGTTT +
Preference number: 5 (lower is better)
Translates to: CLLPLHELQVETGVGLSWQSLSP*QRSLRF
Trigger: AAACCGCAGACTTCTTTGCAATGGGGACAATGACTG...CCAGCTCAGCCCTACACCAGTTTCCACCTGGAGTTCATGCAAGGGCAAAAGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR CAA 90 bp TGCCTTTTGCCCTTGCATGAACTCCAGGTGGAAACTGGTGTAGGGCTGAGCTGGTGGTCTCCACAGTCATaGTCCCCATTGCAAAGAAGT +
Preference number: 5 (lower is better)
Translates to: CLLPLHELQVETGVGLSWWSPQS*SPLQRS
Trigger: ACTTCTTTGCAATGGGGACAATGACTGTGGAGACCA...CCAGCTCAGCCCTACACCAGTTTCCACCTGGAGTTCATGCAAGGGCAAAAGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR CAA 90 bp TGCCTTTTGCCCTTGCATGAACTCCAGGTGGAAACTGGTGTAGGGCTGAGCTGGCTCTCCATGGCCTCTTaGTTCATAACGAGGGTGTAT +
Preference number: 5 (lower is better)
Translates to: CLLPLHELQVETGVGLSWLSMAS*FITRVY
Trigger: ATACACCCTCGTTATGAACAAAGAGGCCATGGAGAG...CCAGCTCAGCCCTACACCAGTTTCCACCTGGAGTTCATGCAAGGGCAAAAGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR CAA 90 bp TTGCCCTTGCATGAACTCCAGGTGGAAACTGGTGTAGGGCTGAGCTGGCATGAGAGAATACCTCTGCATTaGCCTACAGACACACCCAGA +
Preference number: 5 (lower is better)
Translates to: LPLHELQVETGVGLSWHERIPLH*PTDTPR
Trigger: TCTGGGTGTGTCTGTAGGCAAATGCAGAGGTATTCT...CTCATGCCAGCTCAGCCCTACACCAGTTTCCACCTGGAGTTCATGCAAGGGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR CAA 90 bp TGCCTTTTGCCCTTGCATGAACTCCAGGTGGAAACTGGTGTAGGGCTGAGCTGGAGAATACCTCTGCATTaGCCTACAGACACACCCAGA +
Preference number: 5 (lower is better)
Translates to: CLLPLHELQVETGVGLSWRIPLH*PTDTPR
Trigger: TCTGGGTGTGTCTGTAGGCAAATGCAGAGGTATTCT...CCAGCTCAGCCCTACACCAGTTTCCACCTGGAGTTCATGCAAGGGCAAAAGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR CAA 90 bp CCCTTGCATGAACTCCAGGTGGAAACTGGTGTAGGGCTGAGCTGGCATGAGTTCGCTAATGTTTCCAAGTaGCTGGCACAGAGTGGCAAT +
Preference number: 5 (lower is better)
Translates to: PLHELQVETGVGLSWHEFANVSK*LAQSGN
Trigger: ATTGCCACTCTGTGCCAGCAACTTGGAAACATTAGC...GAACTCATGCCAGCTCAGCCCTACACCAGTTTCCACCTGGAGTTCATGCAAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543257.5
CDS-3UTR CAA 90 bp TGCCTTTTGCCCTTGCATGAACTCCAGGTGGAAACTGGTGTAGGGCTGAGCTGGCTCTTAGCAAAGCTCTaGTTGACTGCATTTGACCCA +
Preference number: 5 (lower is better)
Translates to: CLLPLHELQVETGVGLSWLLAKL*LTAFDP
Trigger: TGGGTCAAATGCAGTCAACAAGAGCTTTGCTAAGAG...CCAGCTCAGCCCTACACCAGTTTCCACCTGGAGTTCATGCAAGGGCAAAAGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR CAA 90 bp AGCTTGCATGGCACTGCCTTTTGCCCTTGCATGAACTCCAGGTGGAAACTGGTGCAGTCATTGTCCCCATaGCAAAGAAGTCTGCGGTTT +
Preference number: 5 (lower is better)
Translates to: SLHGTAFCPCMNSRWKLVQSLSP*QRSLRF
Trigger: AAACCGCAGACTTCTTTGCAATGGGGACAATGACTG...CACCAGTTTCCACCTGGAGTTCATGCAAGGGCAAAAGGCAGTGCCATGCAAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR CAA 90 bp AGCTTGCATGGCACTGCCTTTTGCCCTTGCATGAACTCCAGGTGGAAACTGGTGTGGTCTCCACAGTCATaGTCCCCATTGCAAAGAAGT +
Preference number: 5 (lower is better)
Translates to: SLHGTAFCPCMNSRWKLVWSPQS*SPLQRS
Trigger: ACTTCTTTGCAATGGGGACAATGACTGTGGAGACCA...CACCAGTTTCCACCTGGAGTTCATGCAAGGGCAAAAGGCAGTGCCATGCAAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR CAA 90 bp CCCTTGCATGAACTCCAGGTGGAAACTGGTGTAGGGCTGAGCTGGCATGAGTTCTTTGCCTCGATCACTTaGACTACTGATGCCAAGTTC +
Preference number: 5 (lower is better)
Translates to: PLHELQVETGVGLSWHEFFASIT*TTDAKF
Trigger: GAACTTGGCATCAGTAGTCAAAGTGATCGAGGCAAA...GAACTCATGCCAGCTCAGCCCTACACCAGTTTCCACCTGGAGTTCATGCAAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR CAA 90 bp ATTTTAAACAGCTTGCATGGCACTGCCTTTTGCCCTTGCATGAACTCCAGGTGGTTGATGATGGCTGGGTaGTACTGCACAGCGTCTCCC +
Preference number: 5 (lower is better)
Translates to: ILNSLHGTAFCPCMNSRWLMMAG*YCTASP
Trigger: GGGAGACGCTGTGCAGTACAACCCAGCCATCATCAA...CCACCTGGAGTTCATGCAAGGGCAAAAGGCAGTGCCATGCAAGCTGTTTAAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR CAA 90 bp ATTTTAAACAGCTTGCATGGCACTGCCTTTTGCCCTTGCATGAACTCCAGGTGGGGCTCAGGGCTCTCATaGTATGTAGCCCACTGCTGT +
Preference number: 5 (lower is better)
Translates to: ILNSLHGTAFCPCMNSRWGSGLS*YVAHCC
Trigger: ACAGCAGTGGGCTACATACAATGAGAGCCCTGAGCC...CCACCTGGAGTTCATGCAAGGGCAAAAGGCAGTGCCATGCAAGCTGTTTAAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS TCA 90 bp ACTCCGCATCTGTCTGCTCTTAGCAAAGCTCTTGTTGACTGCATTTaGCCCAAAGGAATGTGGCCTTTCACCTCTGGAGCCAGGCAAACT +
Preference number: 5 (lower is better)
Translates to: TPHLSALSKALVDCI*PKGMWPFTSGARQT
Trigger: AGTTTGCCTGGCTCCAGAGGTGAAAGGCCACATTCCTTTGGGTCAAATGCAGTCAACAAGAGCTTTGCTAAGAGCAGACAGATGCGGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000468990.1
ENST00000535057.5
CDS-3UTR CAA 90 bp CCCTTGCATGAACTCCAGGTGGAAACTGGTGTAGGGCTGAGCTGGCATGAGTTCTTAGCAAAGCTCTTGTaGACTGCATTTGACCCAAAG +
Preference number: 5 (lower is better)
Translates to: PLHELQVETGVGLSWHEFLAKLL*TAFDPK
Trigger: CTTTGGGTCAAATGCAGTCAACAAGAGCTTTGCTAA...GAACTCATGCCAGCTCAGCCCTACACCAGTTTCCACCTGGAGTTCATGCAAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR CAA 90 bp TTGCCCTTGCATGAACTCCAGGTGGAAACTGGTGTAGGGCTGAGCTGGCATGAGAAATCCTTCTACAGTTaGCTTCATCTGACTGGTCTC +
Preference number: 5 (lower is better)
Translates to: LPLHELQVETGVGLSWHEKSFYS*LHLTGL
Trigger: GAGACCAGTCAGATGAAGCAAACTGTAGAAGGATTT...CTCATGCCAGCTCAGCCCTACACCAGTTTCCACCTGGAGTTCATGCAAGGGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR CAA 90 bp AGCTTGCATGGCACTGCCTTTTGCCCTTGCATGAACTCCAGGTGGAAACTGGTGAATATGAATTCGTATTaGCCTTGGGTCTGTGGCGTG +
Preference number: 5 (lower is better)
Translates to: SLHGTAFCPCMNSRWKLVNMNSY*PWVCGV
Trigger: CACGCCACAGACCCAAGGCAAATACGAATTCATATT...CACCAGTTTCCACCTGGAGTTCATGCAAGGGCAAAAGGCAGTGCCATGCAAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR CAA 90 bp TTGCCCTTGCATGAACTCCAGGTGGAAACTGGTGTAGGGCTGAGCTGGCATGAGTCATACAAGTGTCCATaGTGCTGGAAATGTAGGCTA +
Preference number: 5 (lower is better)
Translates to: LPLHELQVETGVGLSWHESYKCP*CWKCRL
Trigger: TAGCCTACATTTCCAGCACAATGGACACTTGTATGA...CTCATGCCAGCTCAGCCCTACACCAGTTTCCACCTGGAGTTCATGCAAGGGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535057.5
CDS TCA 90 bp ACTCCGCATCTGTCTGCTCTTAGCAAAGCTCTTGTTGACTGCATTTaGCCCAAAGGAATGTGGCCTTTCACCTCTGGAATAGCTGTGAGG +
Preference number: 5 (lower is better)
Translates to: TPHLSALSKALVDCI*PKGMWPFTSGIAVR
Trigger: CCTCACAGCTATTCCAGAGGTGAAAGGCCACATTCCTTTGGGTCAAATGCAGTCAACAAGAGCTTTGCTAAGAGCAGACAGATGCGGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000494324.1
ENST00000543257.5
CDS-3UTR CAA 90 bp AGCTTGCATGGCACTGCCTTTTGCCCTTGCATGAACTCCAGGTGGAAACTGGTGAAATCCTTCTACAGTTaGCTTCATCTGACTGGTCTC +
Preference number: 5 (lower is better)
Translates to: SLHGTAFCPCMNSRWKLVKSFYS*LHLTGL
Trigger: GAGACCAGTCAGATGAAGCAAACTGTAGAAGGATTT...CACCAGTTTCCACCTGGAGTTCATGCAAGGGCAAAAGGCAGTGCCATGCAAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR CAA 90 bp ATTTTAAACAGCTTGCATGGCACTGCCTTTTGCCCTTGCATGAACTCCAGGTGGGAATTCGTATTTGCCTaGGGTCTGTGGCGTGTAGCT +
Preference number: 5 (lower is better)
Translates to: ILNSLHGTAFCPCMNSRWEFVFA*GLWRVA
Trigger: AGCTACACGCCACAGACCCAAGGCAAATACGAATTC...CCACCTGGAGTTCATGCAAGGGCAAAAGGCAGTGCCATGCAAGCTGTTTAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR CAA 90 bp TGCCTTTTGCCCTTGCATGAACTCCAGGTGGAAACTGGTGTAGGGCTGAGCTGGACCATGGTGTCCCTCTaGTTTCTGTCTTTTATTTCA +
Preference number: 5 (lower is better)
Translates to: CLLPLHELQVETGVGLSWTMVSL*FLSFIS
Trigger: TGAAATAAAAGACAGAAACAAGAGGGACACCATGGT...CCAGCTCAGCCCTACACCAGTTTCCACCTGGAGTTCATGCAAGGGCAAAAGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR CAA 90 bp TGCCTTTTGCCCTTGCATGAACTCCAGGTGGAAACTGGTGTAGGGCTGAGCTGGTTTATTTTAAACAGCTaGCATGGCACTGCCTTTTGC +
Preference number: 5 (lower is better)
Translates to: CLLPLHELQVETGVGLSWFILNS*HGTAFC
Trigger: GCAAAAGGCAGTGCCATGCAAGCTGTTTAAAATAAA...CCAGCTCAGCCCTACACCAGTTTCCACCTGGAGTTCATGCAAGGGCAAAAGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR CAA 90 bp CCCTTGCATGAACTCCAGGTGGAAACTGGTGTAGGGCTGAGCTGGCATGAGTTCTTTATTTTAAACAGCTaGCATGGCACTGCCTTTTGC +
Preference number: 5 (lower is better)
Translates to: PLHELQVETGVGLSWHEFFILNS*HGTAFC
Trigger: GCAAAAGGCAGTGCCATGCAAGCTGTTTAAAATAAA...GAACTCATGCCAGCTCAGCCCTACACCAGTTTCCACCTGGAGTTCATGCAAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS GCA 90 bp CTTCCTAAACCTCGTGTTCAGGATGTAATGCGGGGAGCATCCACCTaGATAATACCTGTGATCAAGAACTGGGCCCTCAAAACTGTTTGT +
Preference number: 5 (lower is better)
Translates to: LPKPRVQDVMRGAST*IIPVIKNWALKTVC
Trigger: ACAAACAGTTTTGAGGGCCCAGTTCTTGATCACAGGTATTATGCAGGTGGATGCTCCCCGCATTACATCCTGAACACGAGGTTTAGGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS CCA 90 bp TGTCTGTGCACACACAAAGCCTTCACATCGCACTTGACTTCCGCATaGTCTGTTGGTAACACAGTCTTCGACTTCCTTGTCAGAGAAGTT +
Preference number: 5 (lower is better)
Translates to: CLCTHKAFTSHLTSA*SVGNTVFDFLVREV
Trigger: AACTTCTCTGACAAGGAAGTCGAAGACTGTGTTACCAACAGACCATGCGGAAGTCAAGTGCGATGTGAAGGCTTTGTGTGTGCACAGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS CCA 90 bp GTAATGCGGGGAGCATCCACCTGCATAATACCTGTGATCAAGAACTaGGCCCTCAAAACTGTTTGTGAACAAATTTATCCCACTGGCCAG +
Preference number: 5 (lower is better)
Translates to: VMRGASTCIIPVIKN*ALKTVCEQIYPTGQ
Trigger: CTGGCCAGTGGGATAAATTTGTTCACAAACAGTTTTGAGGGCCCAGTTCTTGATCACAGGTATTATGCAGGTGGATGCTCCCCGCATTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR CAA 90 bp ATTTTAAACAGCTTGCATGGCACTGCCTTTTGCCCTTGCATGAACTCCAGGTGGGCCAATTCCCCAGTATaGGTCCATTTCATGCTGACA +
Preference number: 5 (lower is better)
Translates to: ILNSLHGTAFCPCMNSRWANSPV*VHFMLT
Trigger: TGTCAGCATGAAATGGACCAATACTGGGGAATTGGC...CCACCTGGAGTTCATGCAAGGGCAAAAGGCAGTGCCATGCAAGCTGTTTAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR CAA 90 bp ATTTTAAACAGCTTGCATGGCACTGCCTTTTGCCCTTGCATGAACTCCAGGTGGCTCTCCATGGCCTCTTaGTTCATAACGAGGGTGTAT +
Preference number: 5 (lower is better)
Translates to: ILNSLHGTAFCPCMNSRWLSMAS*FITRVY
Trigger: ATACACCCTCGTTATGAACAAAGAGGCCATGGAGAG...CCACCTGGAGTTCATGCAAGGGCAAAAGGCAGTGCCATGCAAGCTGTTTAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR CAA 90 bp AGCTTGCATGGCACTGCCTTTTGCCCTTGCATGAACTCCAGGTGGAAACTGGTGACCATGGTGTCCCTCTaGTTTCTGTCTTTTATTTCA +
Preference number: 5 (lower is better)
Translates to: SLHGTAFCPCMNSRWKLVTMVSL*FLSFIS
Trigger: TGAAATAAAAGACAGAAACAAGAGGGACACCATGGT...CACCAGTTTCCACCTGGAGTTCATGCAAGGGCAAAAGGCAGTGCCATGCAAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR CAA 90 bp ATCTTTATTTTAAACAGCTTGCATGGCACTGCCTTTTGCCCTTGCATGAACTCCGCATGGCACTGCCTTTaGCCCTTGCATGAACTCCAG +
Preference number: 5 (lower is better)
Translates to: IFILNSLHGTAFCPCMNSAWHCL*PLHELQ
Trigger: CTGGAGTTCATGCAAGGGCAAAAGGCAGTGCCATGC...GGAGTTCATGCAAGGGCAAAAGGCAGTGCCATGCAAGCTGTTTAAAATAAAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR CAA 90 bp ATTTTAAACAGCTTGCATGGCACTGCCTTTTGCCCTTGCATGAACTCCAGGTGGCTCTTAGCAAAGCTCTaGTTGACTGCATTTGACCCA +
Preference number: 5 (lower is better)
Translates to: ILNSLHGTAFCPCMNSRWLLAKL*LTAFDP
Trigger: TGGGTCAAATGCAGTCAACAAGAGCTTTGCTAAGAG...CCACCTGGAGTTCATGCAAGGGCAAAAGGCAGTGCCATGCAAGCTGTTTAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR CAA 90 bp CATCTTTATTTTAAACAGCTTGCATGGCACTGCCTTTTGCCCTTGCATGAACTCGCCTTCACATCGCACTaGACTTCCGCATGGTCTGTT +
Preference number: 5 (lower is better)
Translates to: HLYFKQLAWHCLLPLHELAFTSH*TSAWSV
Trigger: AACAGACCATGCGGAAGTCAAGTGCGATGTGAAGGC...GAGTTCATGCAAGGGCAAAAGGCAGTGCCATGCAAGCTGTTTAAAATAAAGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR CAA 90 bp ATTTTAAACAGCTTGCATGGCACTGCCTTTTGCCCTTGCATGAACTCCAGGTGGTTTGCCTCGATCACTTaGACTACTGATGCCAAGTTC +
Preference number: 5 (lower is better)
Translates to: ILNSLHGTAFCPCMNSRWFASIT*TTDAKF
Trigger: GAACTTGGCATCAGTAGTCAAAGTGATCGAGGCAAA...CCACCTGGAGTTCATGCAAGGGCAAAAGGCAGTGCCATGCAAGCTGTTTAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR CAA 90 bp ATCTTTATTTTAAACAGCTTGCATGGCACTGCCTTTTGCCCTTGCATGAACTCCGGGGCTACCCCCATTTaGAGGAGGTGGATTGTTACA +
Preference number: 5 (lower is better)
Translates to: IFILNSLHGTAFCPCMNSGATPI*RRWIVT
Trigger: TGTAACAATCCACCTCCTCAAAATGGGGGTAGCCCC...GGAGTTCATGCAAGGGCAAAAGGCAGTGCCATGCAAGCTGTTTAAAATAAAGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR CAA 90 bp CATCTTTATTTTAAACAGCTTGCATGGCACTGCCTTTTGCCCTTGCATGAACTCCACTGCCTTTTGCCCTaGCATGAACTCCAGGTGGAA +
Preference number: 5 (lower is better)
Translates to: HLYFKQLAWHCLLPLHELHCLLP*HELQVE
Trigger: TTCCACCTGGAGTTCATGCAAGGGCAAAAGGCAGTG...GAGTTCATGCAAGGGCAAAAGGCAGTGCCATGCAAGCTGTTTAAAATAAAGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR CAA 90 bp ATCTTTATTTTAAACAGCTTGCATGGCACTGCCTTTTGCCCTTGCATGAACTCCCAGTCTTCGACTTCCTaGTCAGAGAAGTTGCACGGT +
Preference number: 5 (lower is better)
Translates to: IFILNSLHGTAFCPCMNSQSSTS*SEKLHG
Trigger: ACCGTGCAACTTCTCTGACAAGGAAGTCGAAGACTG...GGAGTTCATGCAAGGGCAAAAGGCAGTGCCATGCAAGCTGTTTAAAATAAAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR CAA 90 bp CATCTTTATTTTAAACAGCTTGCATGGCACTGCCTTTTGCCCTTGCATGAACTCCTTCCGCATGGTCTGTaGGTAACACAGTCTTCGACT +
Preference number: 5 (lower is better)
Translates to: HLYFKQLAWHCLLPLHELLPHGL*VTQSST
Trigger: AGTCGAAGACTGTGTTACCAACAGACCATGCGGAAG...GAGTTCATGCAAGGGCAAAAGGCAGTGCCATGCAAGCTGTTTAAAATAAAGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR CAA 90 bp TTACAAGGTAACATCTTTATTTTAAACAGCTTGCATGGCACTGCCTTTTGCCCTTTGATGATGGCTGGGTaGTACTGCACAGCGTCTCCC +
Preference number: 5 (lower is better)
Translates to: LQGNIFILNSLHGTAFCPLMMAG*YCTASP
Trigger: GGGAGACGCTGTGCAGTACAACCCAGCCATCATCAA...AGGGCAAAAGGCAGTGCCATGCAAGCTGTTTAAAATAAAGATGTTACCTTGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR CAA 90 bp CATCTTTATTTTAAACAGCTTGCATGGCACTGCCTTTTGCCCTTGCATGAACTCGGCTCCACCTTAACTTaGATGATGGCTGGGTTGTAC +
Preference number: 5 (lower is better)
Translates to: HLYFKQLAWHCLLPLHELGSTLT*MMAGLY
Trigger: GTACAACCCAGCCATCATCAAAGTTAAGGTGGAGCC...GAGTTCATGCAAGGGCAAAAGGCAGTGCCATGCAAGCTGTTTAAAATAAAGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR CAA 90 bp ATCTTTATTTTAAACAGCTTGCATGGCACTGCCTTTTGCCCTTGCATGAACTCCGGCTCCACCTTAACTTaGATGATGGCTGGGTTGTAC +
Preference number: 5 (lower is better)
Translates to: IFILNSLHGTAFCPCMNSGSTLT*MMAGLY
Trigger: GTACAACCCAGCCATCATCAAAGTTAAGGTGGAGCC...GGAGTTCATGCAAGGGCAAAAGGCAGTGCCATGCAAGCTGTTTAAAATAAAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR CAA 90 bp TTACAAGGTAACATCTTTATTTTAAACAGCTTGCATGGCACTGCCTTTTGCCCTTCCTTGTCAGAGAAGTaGCACGGTTCCCCATGGAAC +
Preference number: 5 (lower is better)
Translates to: LQGNIFILNSLHGTAFCPSLSEK*HGSPWN
Trigger: GTTCCATGGGGAACCGTGCAACTTCTCTGACAAGGA...AGGGCAAAAGGCAGTGCCATGCAAGCTGTTTAAAATAAAGATGTTACCTTGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR CAA 90 bp ATCTTTATTTTAAACAGCTTGCATGGCACTGCCTTTTGCCCTTGCATGAACTCCCAGTCATTGTCCCCATaGCAAAGAAGTCTGCGGTTT +
Preference number: 5 (lower is better)
Translates to: IFILNSLHGTAFCPCMNSQSLSP*QRSLRF
Trigger: AAACCGCAGACTTCTTTGCAATGGGGACAATGACTG...GGAGTTCATGCAAGGGCAAAAGGCAGTGCCATGCAAGCTGTTTAAAATAAAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR CAA 90 bp CATCTTTATTTTAAACAGCTTGCATGGCACTGCCTTTTGCCCTTGCATGAACTCGCCAATTCCCCAGTATaGGTCCATTTCATGCTGACA +
Preference number: 5 (lower is better)
Translates to: HLYFKQLAWHCLLPLHELANSPV*VHFMLT
Trigger: TGTCAGCATGAAATGGACCAATACTGGGGAATTGGC...GAGTTCATGCAAGGGCAAAAGGCAGTGCCATGCAAGCTGTTTAAAATAAAGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR CAA 90 bp ATCTTTATTTTAAACAGCTTGCATGGCACTGCCTTTTGCCCTTGCATGAACTCCCTCTCCATGGCCTCTTaGTTCATAACGAGGGTGTAT +
Preference number: 5 (lower is better)
Translates to: IFILNSLHGTAFCPCMNSLSMAS*FITRVY
Trigger: ATACACCCTCGTTATGAACAAAGAGGCCATGGAGAG...GGAGTTCATGCAAGGGCAAAAGGCAGTGCCATGCAAGCTGTTTAAAATAAAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS GCA 90 bp GCTTCTGGGTTTCAGCTTGTAATGTGCTACTTCAAGGTCAGAGCGTaGATGCAGAAATACGCTTTTAGTATGAGAGAATCGTTTGGTTCT +
Preference number: 5 (lower is better)
Translates to: ASGFQLVMCYFKVRA*MQKYAFSMRESFGS
Trigger: AGAACCAAACGATTCTCTCATACTAAAAGCGTATTTCTGCATGCACGCTCTGACCTTGAAGTAGCACATTACAAGCTGAAACCCAGAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS GCA 90 bp CTCTGCAAAGTAAACAGAAAGCCACTAGTGACTGGAAACAGACTTTaGACAGACCAAAAACTTACCTGTCACTCTGGAAACCAACCAGAA +
Preference number: 5 (lower is better)
Translates to: LCKVNRKPLVTGNRL*TDQKLTCHSGNQPE
Trigger: TTCTGGTTGGTTTCCAGAGTGACAGGTAAGTTTTTGGTCTGTGCAAAGTCTGTTTCCAGTCACTAGTGGCTTTCTGTTTACTTTGCAGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000494324.1
ENST00000535057.5
ENST00000543257.5
CDS-3UTR CAA 90 bp TTACAAGGTAACATCTTTATTTTAAACAGCTTGCATGGCACTGCCTTTTGCCCTGAATTCGTATTTGCCTaGGGTCTGTGGCGTGTAGCT +
Preference number: 5 (lower is better)
Translates to: LQGNIFILNSLHGTAFCPEFVFA*GLWRVA
Trigger: AGCTACACGCCACAGACCCAAGGCAAATACGAATTC...AGGGCAAAAGGCAGTGCCATGCAAGCTGTTTAAAATAAAGATGTTACCTTGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR CAA 90 bp ATCTTTATTTTAAACAGCTTGCATGGCACTGCCTTTTGCCCTTGCATGAACTCCAATATGAATTCGTATTaGCCTTGGGTCTGTGGCGTG +
Preference number: 5 (lower is better)
Translates to: IFILNSLHGTAFCPCMNSNMNSY*PWVCGV
Trigger: CACGCCACAGACCCAAGGCAAATACGAATTCATATT...GGAGTTCATGCAAGGGCAAAAGGCAGTGCCATGCAAGCTGTTTAAAATAAAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR CAA 90 bp CATCTTTATTTTAAACAGCTTGCATGGCACTGCCTTTTGCCCTTGCATGAACTCAGCATGAAGACCAATTaGACCAGCAATTCCACTTCC +
Preference number: 5 (lower is better)
Translates to: HLYFKQLAWHCLLPLHELSMKTN*TSNSTS
Trigger: GGAAGTGGAATTGCTGGTCAAATTGGTCTTCATGCT...GAGTTCATGCAAGGGCAAAAGGCAGTGCCATGCAAGCTGTTTAAAATAAAGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR CAA 90 bp CATCTTTATTTTAAACAGCTTGCATGGCACTGCCTTTTGCCCTTGCATGAACTCACCATGATCCTGGACTaGATCCCTTTTCTTCTGACA +
Preference number: 5 (lower is better)
Translates to: HLYFKQLAWHCLLPLHELTMILD*IPFLLT
Trigger: TGTCAGAAGAAAAGGGATCAAGTCCAGGATCATGGT...GAGTTCATGCAAGGGCAAAAGGCAGTGCCATGCAAGCTGTTTAAAATAAAGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000535057.5
CDS-3UTR CAA 90 bp CATCTTTATTTTAAACAGCTTGCATGGCACTGCCTTTTGCCCTTGCATGAACTCTTAGCAAAGCTCTTGTaGACTGCATTTGACCCAAAG +
Preference number: 5 (lower is better)
Translates to: HLYFKQLAWHCLLPLHELLAKLL*TAFDPK
Trigger: CTTTGGGTCAAATGCAGTCAACAAGAGCTTTGCTAA...GAGTTCATGCAAGGGCAAAAGGCAGTGCCATGCAAGCTGTTTAAAATAAAGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR CAA 90 bp TTACAAGGTAACATCTTTATTTTAAACAGCTTGCATGGCACTGCCTTTTGCCCTTGGTCTCCACAGTCATaGTCCCCATTGCAAAGAAGT +
Preference number: 5 (lower is better)
Translates to: LQGNIFILNSLHGTAFCPWSPQS*SPLQRS
Trigger: ACTTCTTTGCAATGGGGACAATGACTGTGGAGACCA...AGGGCAAAAGGCAGTGCCATGCAAGCTGTTTAAAATAAAGATGTTACCTTGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR CAA 90 bp ATCTTTATTTTAAACAGCTTGCATGGCACTGCCTTTTGCCCTTGCATGAACTCCATTGTTACACTGCCTTaGTCTTGTCTTACGTCTTCC +
Preference number: 5 (lower is better)
Translates to: IFILNSLHGTAFCPCMNSIVTLP*SCLTSS
Trigger: GGAAGACGTAAGACAAGACAAAGGCAGTGTAACAAT...GGAGTTCATGCAAGGGCAAAAGGCAGTGCCATGCAAGCTGTTTAAAATAAAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR CAA 90 bp TTACAAGGTAACATCTTTATTTTAAACAGCTTGCATGGCACTGCCTTTTGCCCTAATATGAATTCGTATTaGCCTTGGGTCTGTGGCGTG +
Preference number: 5 (lower is better)
Translates to: LQGNIFILNSLHGTAFCPNMNSY*PWVCGV
Trigger: CACGCCACAGACCCAAGGCAAATACGAATTCATATT...AGGGCAAAAGGCAGTGCCATGCAAGCTGTTTAAAATAAAGATGTTACCTTGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR CAA 90 bp TTACAAGGTAACATCTTTATTTTAAACAGCTTGCATGGCACTGCCTTTTGCCCTTTTGCCTCGATCACTTaGACTACTGATGCCAAGTTC +
Preference number: 5 (lower is better)
Translates to: LQGNIFILNSLHGTAFCPFASIT*TTDAKF
Trigger: GAACTTGGCATCAGTAGTCAAAGTGATCGAGGCAAA...AGGGCAAAAGGCAGTGCCATGCAAGCTGTTTAAAATAAAGATGTTACCTTGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR CAA 90 bp CATCTTTATTTTAAACAGCTTGCATGGCACTGCCTTTTGCCCTTGCATGAACTCACCATGGTGTCCCTCTaGTTTCTGTCTTTTATTTCA +
Preference number: 5 (lower is better)
Translates to: HLYFKQLAWHCLLPLHELTMVSL*FLSFIS
Trigger: TGAAATAAAAGACAGAAACAAGAGGGACACCATGGT...GAGTTCATGCAAGGGCAAAAGGCAGTGCCATGCAAGCTGTTTAAAATAAAGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR CAA 90 bp TTACAAGGTAACATCTTTATTTTAAACAGCTTGCATGGCACTGCCTTTTGCCCTAGCATGAAGACCAATTaGACCAGCAATTCCACTTCC +
Preference number: 5 (lower is better)
Translates to: LQGNIFILNSLHGTAFCPSMKTN*TSNSTS
Trigger: GGAAGTGGAATTGCTGGTCAAATTGGTCTTCATGCT...AGGGCAAAAGGCAGTGCCATGCAAGCTGTTTAAAATAAAGATGTTACCTTGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR CAA 90 bp ATCTTTATTTTAAACAGCTTGCATGGCACTGCCTTTTGCCCTTGCATGAACTCCTTTATTTTAAACAGCTaGCATGGCACTGCCTTTTGC +
Preference number: 5 (lower is better)
Translates to: IFILNSLHGTAFCPCMNSFILNS*HGTAFC
Trigger: GCAAAAGGCAGTGCCATGCAAGCTGTTTAAAATAAA...GGAGTTCATGCAAGGGCAAAAGGCAGTGCCATGCAAGCTGTTTAAAATAAAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR CAA 90 bp TTACAAGGTAACATCTTTATTTTAAACAGCTTGCATGGCACTGCCTTTTGCCCTTTAGCAAAGCTCTTGTaGACTGCATTTGACCCAAAG +
Preference number: 5 (lower is better)
Translates to: LQGNIFILNSLHGTAFCPLAKLL*TAFDPK
Trigger: CTTTGGGTCAAATGCAGTCAACAAGAGCTTTGCTAA...AGGGCAAAAGGCAGTGCCATGCAAGCTGTTTAAAATAAAGATGTTACCTTGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS-3UTR CAA 90 bp TTACAAGGTAACATCTTTATTTTAAACAGCTTGCATGGCACTGCCTTTTGCCCTATTGTTACACTGCCTTaGTCTTGTCTTACGTCTTCC +
Preference number: 5 (lower is better)
Translates to: LQGNIFILNSLHGTAFCPIVTLP*SCLTSS
Trigger: GGAAGACGTAAGACAAGACAAAGGCAGTGTAACAAT...AGGGCAAAAGGCAGTGCCATGCAAGCTGTTTAAAATAAAGATGTTACCTTGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS CCA 72 bp CCCCACTCCTGCATCAGGTCCGCCGTCGGCAGCTCCTaGTATGCCAGGGTGGTGATGTGCTCACTTGCCCCT +
Preference number: 6 (lower is better)
Translates to: PHSCIRSAVGSS*YARVVMCSLAP
Trigger: AGGGGCAAGTGAGCACATCACCACCCTGGCATACCAGGAGCTGCCGACGGCGGACCTGATGCAGGAGTGGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS GCA 72 bp GCCGTCGGCAGCTCCTGGTATGCCAGGGTGGTGATGTaGTCACTTGCCCCTCCTCGTACCAGGACCACCAAG +
Preference number: 6 (lower is better)
Translates to: AVGSSWYARVVM*SLAPPRTRTTK
Trigger: CTTGGTGGTCCTGGTACGAGGAGGGGCAAGTGAGCACATCACCACCCTGGCATACCAGGAGCTGCCGACGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS GCA 72 bp ATGGCTGGGTTGTACTGCACAGCGTCTCCCCACTCCTaGATCAGGTCCGCCGTCGGCAGCTCCTGGTATGCC +
Preference number: 6 (lower is better)
Translates to: MAGLYCTASPHS*IRSAVGSSWYA
Trigger: GGCATACCAGGAGCTGCCGACGGCGGACCTGATGCAGGAGTGGGGAGACGCTGTGCAGTACAACCCAGCCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS GCA 72 bp CAGCTCCTGGTATGCCAGGGTGGTGATGTGCTCACTTaGCCCTCCTCGTACCAGGACCACCAAGTCCTCCAC +
Preference number: 6 (lower is better)
Translates to: QLLVCQGGDVLT*PSSYQDHQVLH
Trigger: GTGGAGGACTTGGTGGTCCTGGTACGAGGAGGGGCAAGTGAGCACATCACCACCCTGGCATACCAGGAGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS GCA 72 bp GGCTCCACCTTAACTTTGATGATGGCTGGGTTGTACTaGACAGCGTCTCCCCACTCCTGCATCAGGTCCGCC +
Preference number: 6 (lower is better)
Translates to: GSTLTLMMAGLY*TASPHSCIRSA
Trigger: GGCGGACCTGATGCAGGAGTGGGGAGACGCTGTGCAGTACAACCCAGCCATCATCAAAGTTAAGGTGGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS GCA 72 bp CCTCACAGGCTAGGCCTTGGGATCCAACAGGACAGATaGAGTCACAGCGTGATCCTTTCAGGACAGGGACTC +
Preference number: 6 (lower is better)
Translates to: PHRLGLGIQQDR*SHSVILSGQGL
Trigger: GAGTCCCTGTCCTGAAAGGATCACGCTGTGACTGCATCTGTCCTGTTGGATCCCAAGGCCTAGCCTGTGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371237.9
ENST00000465658.1
ENST00000535057.5
ENST00000543257.5
CDS CAA 72 bp TACAGAGGCTCCACCTTAACTTTGATGATGGCTGGGTaGTACTGCACAGCGTCTCCCCACTCCTGCATCAGG +
Preference number: 6 (lower is better)
Translates to: YRGSTLTLMMAG*YCTASPHSCIR
Trigger: CCTGATGCAGGAGTGGGGAGACGCTGTGCAGTACAACCCAGCCATCATCAAAGTTAAGGTGGAGCCTCTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS TCA 72 bp CCTGTCTGTGCACACACAAAGCCTTCACATCGCACTTaGCTTCCGCATGGTCTGTTGGTAACACAGTCTTCG +
Preference number: 6 (lower is better)
Translates to: PVCAHTKPSHRT*LPHGLLVTQSS
Trigger: CGAAGACTGTGTTACCAACAGACCATGCGGAAGTCAAGTGCGATGTGAAGGCTTTGTGTGTGCACAGACAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS TCA 72 bp CCCACACTCCACACCAGCTCCTTGCTCTTCTTCTGGTaGATTATTCTCTGGACCTCCCCAGAGTTCCTTTTC +
Preference number: 6 (lower is better)
Translates to: PTLHTSSLLFFW*IILWTSPEFLF
Trigger: GAAAAGGAACTCTGGGGAGGTCCAGAGAATAATTCACCAGAAGAAGAGCAAGGAGCTGGTGTGGAGTGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465658.1
CDS GCA 72 bp CCTCGTGTTCAGGATGTAATGCGGGGAGCATCCACCTaGATAATACCTGTGATCAAGAACTGGGCCCTCAAA +
Preference number: 6 (lower is better)
Translates to: PRVQDVMRGAST*IIPVIKNWALK
Trigger: TTTGAGGGCCCAGTTCTTGATCACAGGTATTATGCAGGTGGATGCTCCCCGCATTACATCCTGAACACGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS GCA 72 bp GTGGCAGGAACTAACTTCCTTCTGGAACTCCTCCAGTaGCTGCTTCATGTTCTGCCTCACTGTGCTGGAATA +
Preference number: 6 (lower is better)
Translates to: VAGTNFLLELLQ*LLHVLPHCAGI
Trigger: TATTCCAGCACAGTGAGGCAGAACATGAAGCAGGCACTGGAGGAGTTCCAGAAGGAAGTTAGTTCCTGCCAC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS CCA 72 bp TTCATACAGAGGCTCCACCTTAACTTTGATGATGGCTaGGTTGTACTGCACAGCGTCTCCCCACTCCTGCAT +
Preference number: 6 (lower is better)
Translates to: FIQRLHLNFDDG*VVLHSVSPLLH
Trigger: ATGCAGGAGTGGGGAGACGCTGTGCAGTACAACCCAGCCATCATCAAAGTTAAGGTGGAGCCTCTGTATGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS TCA 72 bp CTGTCTGCTCTTAGCAAAGCTCTTGTTGACTGCATTTaGCCCAAAGGAATGTGGCCTTTCACCTCTGGAGCC +
Preference number: 6 (lower is better)
Translates to: LSALSKALVDCI*PKGMWPFTSGA
Trigger: GGCTCCAGAGGTGAAAGGCCACATTCCTTTGGGTCAAATGCAGTCAACAAGAGCTTTGCTAAGAGCAGACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000468990.1
ENST00000535057.5
CDS TCA 72 bp GGGTGTATTCATAAATGCCCCCAAGCACAGCCTCTGTaGTGTAGTGGGTCCCAAAATCACGGAAGAGATCTC +
Preference number: 6 (lower is better)
Translates to: GCIHKCPQAQPL*CSGSQNHGRDL
Trigger: GAGATCTCTTCCGTGATTTTGGGACCCACTACATCACAGAGGCTGTGCTTGGGGGCATTTATGAATACACCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS CAA 72 bp TCCTGTCTGTGCACACACAAAGCCTTCACATCGCACTaGACTTCCGCATGGTCTGTTGGTAACACAGTCTTC +
Preference number: 6 (lower is better)
Translates to: SCLCTHKAFTSH*TSAWSVGNTVF
Trigger: GAAGACTGTGTTACCAACAGACCATGCGGAAGTCAAGTGCGATGTGAAGGCTTTGTGTGTGCACAGACAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS CAA 90 bp GTAACATCCACACTCCGCATCTGTCTGCTCTTAGCAAAGCTCTTGTaGACTGCATTTGACCCAAAGGAATGTGGCCTTTCACCTCTGGAG +
Preference number: 6 (lower is better)
Translates to: VTSTLRICLLLAKLL*TAFDPKECGLSPLE
Trigger: CTCCAGAGGTGAAAGGCCACATTCCTTTGGGTCAAATGCAGTCAACAAGAGCTTTGCTAAGAGCAGACAGATGCGGAGTGTGGATGTTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000468990.1
ENST00000535057.5
CDS CAA 90 bp AGGGTAACATCCACACTCCGCATCTGTCTGCTCTTAGCAAAGCTCTaGTTGACTGCATTTGACCCAAAGGAATGTGGCCTTTCACCTCTG +
Preference number: 6 (lower is better)
Translates to: RVTSTLRICLLLAKL*LTAFDPKECGLSPL
Trigger: CAGAGGTGAAAGGCCACATTCCTTTGGGTCAAATGCAGTCAACAAGAGCTTTGCTAAGAGCAGACAGATGCGGAGTGTGGATGTTACCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371237.9
ENST00000468990.1
ENST00000494324.1
ENST00000535057.5
ENST00000543257.5
CDS CCA 72 bp ACACACAAAGCCTTCACATCGCACTTGACTTCCGCATaGTCTGTTGGTAACACAGTCTTCGACTTCCTTGTC +
Preference number: 6 (lower is better)
Translates to: THKAFTSHLTSA*SVGNTVFDFLV
Trigger: GACAAGGAAGTCGAAGACTGTGTTACCAACAGACCATGCGGAAGTCAAGTGCGATGTGAAGGCTTTGTGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS CAA 72 bp TCCACACTCCGCATCTGTCTGCTCTTAGCAAAGCTCTaGTTGACTGCATTTGACCCAAAGGAATGTGGCCTT +
Preference number: 6 (lower is better)
Translates to: STLRICLLLAKL*LTAFDPKECGL
Trigger: AAGGCCACATTCCTTTGGGTCAAATGCAGTCAACAAGAGCTTTGCTAAGAGCAGACAGATGCGGAGTGTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371237.9
ENST00000468990.1
ENST00000494324.1
ENST00000535057.5
ENST00000543257.5
CDS CAA 90 bp GTAACATCCACACTCCGCATCTGTCTGCTCTTAGCAAAGCTCTTGTaGACTGCATTTGACCCAAAGGAATGTGGCCTTTCACCTCTGGAA +
Preference number: 6 (lower is better)
Translates to: VTSTLRICLLLAKLL*TAFDPKECGLSPLE
Trigger: TTCCAGAGGTGAAAGGCCACATTCCTTTGGGTCAAATGCAGTCAACAAGAGCTTTGCTAAGAGCAGACAGATGCGGAGTGTGGATGTTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000494324.1
ENST00000543257.5
CDS CAA 90 bp GGCTACCCCCATTTTGAGGAGGTGGATTGTTACACTGCCTTTGTCTaGTCTTACGTCTTCCAGAGCATGAAGACCAATTTGACCAGCAAT +
Preference number: 6 (lower is better)
Translates to: GYPHFEEVDCYTAFV*SYVFQSMKTNLTSN
Trigger: ATTGCTGGTCAAATTGGTCTTCATGCTCTGGAAGACGTAAGACAAGACAAAGGCAGTGTAACAATCCACCTCCTCAAAATGGGGGTAGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS CAA 72 bp ACACTCCGCATCTGTCTGCTCTTAGCAAAGCTCTTGTaGACTGCATTTGACCCAAAGGAATGTGGCCTTTCA +
Preference number: 6 (lower is better)
Translates to: TLRICLLLAKLL*TAFDPKECGLS
Trigger: TGAAAGGCCACATTCCTTTGGGTCAAATGCAGTCAACAAGAGCTTTGCTAAGAGCAGACAGATGCGGAGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371237.9
ENST00000468990.1
ENST00000494324.1
ENST00000535057.5
ENST00000543257.5
CDS TCA 72 bp ACCTGTGATCAAGAACTGGGCCCTCAAAACTGTTTGTaGACAAATTTATCCCACTGGCCAGACTGCCAATTC +
Preference number: 6 (lower is better)
Translates to: TCDQELGPQNCL*TNLSHWPDCQF
Trigger: GAATTGGCAGTCTGGCCAGTGGGATAAATTTGTTCACAAACAGTTTTGAGGGCCCAGTTCTTGATCACAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS TCA 72 bp CTGTCTGCTCTTAGCAAAGCTCTTGTTGACTGCATTTaGCCCAAAGGAATGTGGCCTTTCACCTCTGGAATA +
Preference number: 6 (lower is better)
Translates to: LSALSKALVDCI*PKGMWPFTSGI
Trigger: TATTCCAGAGGTGAAAGGCCACATTCCTTTGGGTCAAATGCAGTCAACAAGAGCTTTGCTAAGAGCAGACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000494324.1
ENST00000543257.5
CDS CAA 72 bp GTCTTGTCTTACGTCTTCCAGAGCATGAAGACCAATTaGACCAGCAATTCCACTTCCCATCAATGGGGGTAT +
Preference number: 6 (lower is better)
Translates to: VLSYVFQSMKTN*TSNSTSHQWGY
Trigger: ATACCCCCATTGATGGGAAGTGGAATTGCTGGTCAAATTGGTCTTCATGCTCTGGAAGACGTAAGACAAGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS CAA 90 bp GCTCTGCAAAGTAAACAGAAAGCCACTAGTGACTGGAAACAGACTTaGCACAGACCAAAAACTTACCTGTCACTCTGGAAACCAACCAGA +
Preference number: 6 (lower is better)
Translates to: ALQSKQKATSDWKQT*HRPKTYLSLWKPTR
Trigger: TCTGGTTGGTTTCCAGAGTGACAGGTAAGTTTTTGGTCTGTGCAAAGTCTGTTTCCAGTCACTAGTGGCTTTCTGTTTACTTTGCAGAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000494324.1
ENST00000535057.5
ENST00000543257.5
CDS CCA 72 bp GGAGCATCCACCTGCATAATACCTGTGATCAAGAACTaGGCCCTCAAAACTGTTTGTGAACAAATTTATCCC +
Preference number: 6 (lower is better)
Translates to: GASTCIIPVIKN*ALKTVCEQIYP
Trigger: GGGATAAATTTGTTCACAAACAGTTTTGAGGGCCCAGTTCTTGATCACAGGTATTATGCAGGTGGATGCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS CAA 72 bp CATTTTGAGGAGGTGGATTGTTACACTGCCTTTGTCTaGTCTTACGTCTTCCAGAGCATGAAGACCAATTTG +
Preference number: 6 (lower is better)
Translates to: HFEEVDCYTAFV*SYVFQSMKTNL
Trigger: CAAATTGGTCTTCATGCTCTGGAAGACGTAAGACAAGACAAAGGCAGTGTAACAATCCACCTCCTCAAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5
CDS CAA 90 bp AGAGAATCGTTTGGTTCTCCTAATATAGTGTTTGCCTCGATCACTTaGACTACTGATGCCAAGTTCAAATATTCCAGGTATTTTAAAACC +
Preference number: 6 (lower is better)
Translates to: RESFGSPNIVFASIT*TTDAKFKYSRYFKT
Trigger: GGTTTTAAAATACCTGGAATATTTGAACTTGGCATCAGTAGTCAAAGTGATCGAGGCAAACACTATATTAGGAGAACCAAACGATTCTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371237.9
ENST00000535057.5
ENST00000543257.5