RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for C7ORF65 (Homo sapiens)

Ensembl gene IDs: ENSG00000221845

Ensembl transcript IDs: ENST00000408988.2

Found 41 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS GCA 90 bp ATGCCCCTGGGTGGAGGCATGGAGGGAACCTGCATCCAGCAGGGATaGTGCCGGGTGAGAAGGCTCAAGGGAGGGGCGAGTGTAGGTGGG +
Preference number: 5 (lower is better)
Translates to: MPLGGGMEGTCIQQG*CRVRRLKGGASVGG
Trigger: CCCACCTACACTCGCCCCTCCCTTGAGCCTTCTCACCCGGCAGCATCCCTGCTGGATGCAGGTTCCCTCCATGCCTCCACCCAGGGGCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000408988.2
CDS CCA 90 bp ATGGTGCAGGGAAGGAAGGGCTCTGGAGACGGTCGCAATGAGGGGTaGGGATGCCCCTGGGTGGAGGCATGGAGGGAACCTGCATCCAGC +
Preference number: 5 (lower is better)
Translates to: MVQGRKGSGDGRNEG*GCPWVEAWREPASS
Trigger: GCTGGATGCAGGTTCCCTCCATGCCTCCACCCAGGGGCATCCCCACCCCTCATTGCGACCGTCTCCAGAGCCCTTCCTTCCCTGCACCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000408988.2
CDS TCA 90 bp ACGGGGATGCCCAGAGTGCCTGGAGGATGTAGACCGTGGAGGATCTaGGCCCACTCACCCGGAGTGACACCTGGGCTTCTGCAGAGCCAG +
Preference number: 5 (lower is better)
Translates to: TGMPRVPGGCRPWRI*AHSPGVTPGLLQSQ
Trigger: CTGGCTCTGCAGAAGCCCAGGTGTCACTCCGGGTGAGTGGGCTCAGATCCTCCACGGTCTACATCCTCCAGGCACTCTGGGCATCCCCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408988.2
CDS GCA 90 bp ACCCATGACACCTACAGCCACGGGCATTGTGGTCCTTGTCCCCACTaGCCAGTCACTGCCTGGTGCCGCCTGAGGTTGCCTTCCTTTGGC +
Preference number: 5 (lower is better)
Translates to: THDTYSHGHCGPCPH*PVTAWCRLRLPSFG
Trigger: GCCAAAGGAAGGCAACCTCAGGCGGCACCAGGCAGTGACTGGGCAGTGGGGACAAGGACCACAATGCCCGTGGCTGTAGGTGTCATGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408988.2
CDS CCA 90 bp GAAGCAGGCCCTACAGGCAGCCCTCTGGCTGGAGTTCTAAGGGCCTaGAAGAAGCGGGTGGCTAGGAGGCAGTTCTTGGCATCCTGGCCT +
Preference number: 5 (lower is better)
Translates to: EAGPTGSPLAGVLRA*KKRVARRQFLASWP
Trigger: AGGCCAGGATGCCAAGAACTGCCTCCTAGCCACCCGCTTCTTCCAGGCCCTTAGAACTCCAGCCAGAGGGCTGCCTGTAGGGCCTGCTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408988.2
CDS GCA 90 bp CAGCACTTGTGGGGTAGACAGGGACGGGGTAAGGAGTGCTGTCACTaGTCTGAGCAGCTGCACAGAAGCAGGCCCTACAGGCAGCCCTCT +
Preference number: 5 (lower is better)
Translates to: QHLWGRQGRGKECCH*SEQLHRSRPYRQPS
Trigger: AGAGGGCTGCCTGTAGGGCCTGCTTCTGTGCAGCTGCTCAGAGCAGTGACAGCACTCCTTACCCCGTCCCTGTCTACCCCACAAGTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000408988.2
CDS GCA 90 bp GTAGACAGGGACGGGGTAAGGAGTGCTGTCACTGCTCTGAGCAGCTaGACAGAAGCAGGCCCTACAGGCAGCCCTCTGGCTGGAGTTCTA +
Preference number: 5 (lower is better)
Translates to: VDRDGVRSAVTALSS*TEAGPTGSPLAGVL
Trigger: TAGAACTCCAGCCAGAGGGCTGCCTGTAGGGCCTGCTTCTGTGCAGCTGCTCAGAGCAGTGACAGCACTCCTTACCCCGTCCCTGTCTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408988.2
CDS TCA 90 bp CTGGAGGATGTAGACCGTGGAGGATCTGAGCCCACTCACCCGGAGTaGCACCTGGGCTTCTGCAGAGCCAGTCAGGACATCAGGACACTA +
Preference number: 5 (lower is better)
Translates to: LEDVDRGGSEPTHPE*HLGFCRASQDIRTL
Trigger: TAGTGTCCTGATGTCCTGACTGGCTCTGCAGAAGCCCAGGTGTCACTCCGGGTGAGTGGGCTCAGATCCTCCACGGTCTACATCCTCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408988.2
CDS GCA 90 bp CAGCATCAGCTCTCTTTGGTGAATAGCTGTGTGGCCTGGGCAAGTTaGTTAACTTCTCTGAAGTTGTTTCCTTACCGCTGCCTCCCTCCC +
Preference number: 5 (lower is better)
Translates to: QHQLSLVNSCVAWAS*LTSLKLFPYRCLPP
Trigger: GGGAGGGAGGCAGCGGTAAGGAAACAACTTCAGAGAAGTTAAGCAACTTGCCCAGGCCACACAGCTATTCACCAAAGAGAGCTGATGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408988.2
CDS TCA 90 bp AAACCATTTATGTATAGCACCTTGCACCGTGCCCAGCTGAGCCAGTaGGATCCAGTGTCTTCCAAGCCACCAGCCTTCTCTAGGGTGATT +
Preference number: 5 (lower is better)
Translates to: KPFMYSTLHRAQLSQ*DPVSSKPPAFSRVI
Trigger: AATCACCCTAGAGAAGGCTGGTGGCTTGGAAGACACTGGATCTCACTGGCTCAGCTGGGCACGGTGCAAGGTGCTATACATAAATGGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408988.2
CDS CCA 90 bp TCTTCCAAGCCACCAGCCTTCTCTAGGGTGATTCCACATGAATTCTaGGCAGGTCCAGCCTCACTGATTGCCTTGAACAGAAATAGCAGC +
Preference number: 5 (lower is better)
Translates to: SSKPPAFSRVIPHEF*AGPASLIALNRNSS
Trigger: GCTGCTATTTCTGTTCAAGGCAATCAGTGAGGCTGGACCTGCCCAGAATTCATGTGGAATCACCCTAGAGAAGGCTGGTGGCTTGGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408988.2
CDS GCA 90 bp AGTATCAGACGAAAGAAATATCTCCCTTCTGAGACAATGTACACCTaGCTGAACTGGCCTGAAACAAGAGGTGGTAAAATTTCTCCCTCG +
Preference number: 5 (lower is better)
Translates to: SIRRKKYLPSETMYT*LNWPETRGGKISPS
Trigger: CGAGGGAGAAATTTTACCACCTCTTGTTTCAGGCCAGTTCAGGCAGGTGTACATTGTCTCAGAAGGGAGATATTTCTTTCGTCTGATACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408988.2
CDS CCA 90 bp CGAAAGAAATATCTCCCTTCTGAGACAATGTACACCTGCCTGAACTaGCCTGAAACAAGAGGTGGTAAAATTTCTCCCTCGGTAACATGT +
Preference number: 5 (lower is better)
Translates to: RKKYLPSETMYTCLN*PETRGGKISPSVTC
Trigger: ACATGTTACCGAGGGAGAAATTTTACCACCTCTTGTTTCAGGCCAGTTCAGGCAGGTGTACATTGTCTCAGAAGGGAGATATTTCTTTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408988.2
CDS CAA 90 bp CGCTGCCTCCCTCCCTGGGGCCCGGCCAGAGCCGTCTTCCTTCTGTaGACTCTGTTGGTGCCATCCTCATCCCACTGCCCGGGTGACTCG +
Preference number: 6 (lower is better)
Translates to: RCLPPWGPARAVFLL*TLLVPSSSHCPGDS
Trigger: CGAGTCACCCGGGCAGTGGGATGAGGATGGCACCAACAGAGTCAACAGAAGGAAGACGGCTCTGGCCGGGCCCCAGGGAGGGAGGCAGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408988.2
CDS CCA 72 bp GGAAGGAAGGGCTCTGGAGACGGTCGCAATGAGGGGTaGGGATGCCCCTGGGTGGAGGCATGGAGGGAACCT +
Preference number: 6 (lower is better)
Translates to: GRKGSGDGRNEG*GCPWVEAWREP
Trigger: AGGTTCCCTCCATGCCTCCACCCAGGGGCATCCCCACCCCTCATTGCGACCGTCTCCAGAGCCCTTCCTTCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000408988.2
CDS GCA 72 bp AAGCTGTCCCCACCCAGAGGACGGGGATGCCCAGAGTaGCTGGAGGATGTAGACCGTGGAGGATCTGAGCCC +
Preference number: 6 (lower is better)
Translates to: KLSPPRGRGCPE*LEDVDRGGSEP
Trigger: GGGCTCAGATCCTCCACGGTCTACATCCTCCAGGCACTCTGGGCATCCCCGTCCTCTGGGTGGGGACAGCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000408988.2
CDS CAA 72 bp GGCCCGGCCAGAGCCGTCTTCCTTCTGTTGACTCTGTaGGTGCCATCCTCATCCCACTGCCCGGGTGACTCG +
Preference number: 6 (lower is better)
Translates to: GPARAVFLLLTL*VPSSSHCPGDS
Trigger: CGAGTCACCCGGGCAGTGGGATGAGGATGGCACCAACAGAGTCAACAGAAGGAAGACGGCTCTGGCCGGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408988.2
CDS CAA 90 bp CCTCCCTGGGGCCCGGCCAGAGCCGTCTTCCTTCTGTTGACTCTGTaGGTGCCATCCTCATCCCACTGCCCGGGTGACTCGTCTGCCAAA +
Preference number: 6 (lower is better)
Translates to: PPWGPARAVFLLLTL*VPSSSHCPGDSSAK
Trigger: TTTGGCAGACGAGTCACCCGGGCAGTGGGATGAGGATGGCACCAACAGAGTCAACAGAAGGAAGACGGCTCTGGCCGGGCCCCAGGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408988.2
CDS TCA 72 bp CCCAGAGTGCCTGGAGGATGTAGACCGTGGAGGATCTaGGCCCACTCACCCGGAGTGACACCTGGGCTTCTG +
Preference number: 6 (lower is better)
Translates to: PRVPGGCRPWRI*AHSPGVTPGLL
Trigger: CAGAAGCCCAGGTGTCACTCCGGGTGAGTGGGCTCAGATCCTCCACGGTCTACATCCTCCAGGCACTCTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408988.2
CDS GCA 72 bp GACGGGGTAAGGAGTGCTGTCACTGCTCTGAGCAGCTaGACAGAAGCAGGCCCTACAGGCAGCCCTCTGGCT +
Preference number: 6 (lower is better)
Translates to: DGVRSAVTALSS*TEAGPTGSPLA
Trigger: AGCCAGAGGGCTGCCTGTAGGGCCTGCTTCTGTGCAGCTGCTCAGAGCAGTGACAGCACTCCTTACCCCGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408988.2
CDS GCA 72 bp TGGGGTAGACAGGGACGGGGTAAGGAGTGCTGTCACTaGTCTGAGCAGCTGCACAGAAGCAGGCCCTACAGG +
Preference number: 6 (lower is better)
Translates to: WGRQGRGKECCH*SEQLHRSRPYR
Trigger: CCTGTAGGGCCTGCTTCTGTGCAGCTGCTCAGAGCAGTGACAGCACTCCTTACCCCGTCCCTGTCTACCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000408988.2
CDS CCA 72 bp GTGGAGGATCTGAGCCCACTCACCCGGAGTGACACCTaGGCTTCTGCAGAGCCAGTCAGGACATCAGGACAC +
Preference number: 6 (lower is better)
Translates to: VEDLSPLTRSDT*ASAEPVRTSGH
Trigger: GTGTCCTGATGTCCTGACTGGCTCTGCAGAAGCCCAGGTGTCACTCCGGGTGAGTGGGCTCAGATCCTCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408988.2
CDS CCA 72 bp CCTACAGGCAGCCCTCTGGCTGGAGTTCTAAGGGCCTaGAAGAAGCGGGTGGCTAGGAGGCAGTTCTTGGCA +
Preference number: 6 (lower is better)
Translates to: PTGSPLAGVLRA*KKRVARRQFLA
Trigger: TGCCAAGAACTGCCTCCTAGCCACCCGCTTCTTCCAGGCCCTTAGAACTCCAGCCAGAGGGCTGCCTGTAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408988.2
CDS GCA 72 bp CAGCACTTGTGGGGTAGACAGGGACGGGGTAAGGAGTaGTGTCACTGCTCTGAGCAGCTGCACAGAAGCAGG +
Preference number: 6 (lower is better)
Translates to: QHLWGRQGRGKE*CHCSEQLHRSR
Trigger: CCTGCTTCTGTGCAGCTGCTCAGAGCAGTGACAGCACTCCTTACCCCGTCCCTGTCTACCCCACAAGTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000408988.2
CDS CCA 72 bp TCTCTGAAGTTGTTTCCTTACCGCTGCCTCCCTCCCTaGGGCCCGGCCAGAGCCGTCTTCCTTCTGTTGACT +
Preference number: 6 (lower is better)
Translates to: SLKLFPYRCLPP*GPARAVFLLLT
Trigger: AGTCAACAGAAGGAAGACGGCTCTGGCCGGGCCCCAGGGAGGGAGGCAGCGGTAAGGAAACAACTTCAGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408988.2
CDS CCA 72 bp AAGAAGCGGGTGGCTAGGAGGCAGTTCTTGGCATCCTaGCCTCCAGGAAGGCAGGTACACACTGTGGGAGCA +
Preference number: 6 (lower is better)
Translates to: KKRVARRQFLAS*PPGRQVHTVGA
Trigger: TGCTCCCACAGTGTGTACCTGCCTTCCTGGAGGCCAGGATGCCAAGAACTGCCTCCTAGCCACCCGCTTCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408988.2
CDS CAA 90 bp AGAGCAGAGGCCAGCATGGACACGACCCAAGTAAGCAGGCAGCACTaGTGGGGTAGACAGGGACGGGGTAAGGAGTGCTGTCACTGCTCT +
Preference number: 6 (lower is better)
Translates to: RAEASMDTTQVSRQH*WGRQGRGKECCHCS
Trigger: AGAGCAGTGACAGCACTCCTTACCCCGTCCCTGTCTACCCCACAAGTGCTGCCTGCTTACTTGGGTCGTGTCCATGCTGGCCTCTGCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000408988.2
CDS GCA 72 bp AGTTGCTTAACTTCTCTGAAGTTGTTTCCTTACCGCTaGCTCCCTCCCTGGGGCCCGGCCAGAGCCGTCTTC +
Preference number: 6 (lower is better)
Translates to: SCLTSLKLFPYR*LPPWGPARAVF
Trigger: GAAGACGGCTCTGGCCGGGCCCCAGGGAGGGAGGCAGCGGTAAGGAAACAACTTCAGAGAAGTTAAGCAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408988.2
CDS CAA 72 bp TGTGTGGCCTGGGCAAGTTGCTTAACTTCTCTGAAGTaGTTTCCTTACCGCTGCCTCCCTCCCTGGGGCCCG +
Preference number: 6 (lower is better)
Translates to: CVAWASCLTSLK*FPYRCLPPWGP
Trigger: CGGGCCCCAGGGAGGGAGGCAGCGGTAAGGAAACAACTTCAGAGAAGTTAAGCAACTTGCCCAGGCCACACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408988.2
CDS CAA 90 bp TCCTGGCCTCCAGGAAGGCAGGTACACACTGTGGGAGCACCAGCCTaGTCCTCCAGAGCATCACAATTCAGCGCTGAGTCAGGATGTAGA +
Preference number: 6 (lower is better)
Translates to: SWPPGRQVHTVGAPA*SSRASQFSAESGCR
Trigger: TCTACATCCTGACTCAGCGCTGAATTGTGATGCTCTGGAGGACAAGGCTGGTGCTCCCACAGTGTGTACCTGCCTTCCTGGAGGCCAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408988.2
CDS GCA 72 bp ACCATTATCTCCCCTCCACTCTCAGCGCAGGGCAAGTaGCAACCTCACTCCACTACCCTCAGATGTCAGGCA +
Preference number: 6 (lower is better)
Translates to: TIISPPLSAQGK*QPHSTTLRCQA
Trigger: TGCCTGACATCTGAGGGTAGTGGAGTGAGGTTGGCACTTGCCCTGCGCTGAGAGTGGAGGGGAGATAATGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408988.2
CDS CAA 72 bp CCAGGAAGGCAGGTACACACTGTGGGAGCACCAGCCTaGTCCTCCAGAGCATCACAATTCAGCGCTGAGTCA +
Preference number: 6 (lower is better)
Translates to: PGRQVHTVGAPA*SSRASQFSAES
Trigger: TGACTCAGCGCTGAATTGTGATGCTCTGGAGGACAAGGCTGGTGCTCCCACAGTGTGTACCTGCCTTCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408988.2
CDS TCA 72 bp ATGTATAGCACCTTGCACCGTGCCCAGCTGAGCCAGTaGGATCCAGTGTCTTCCAAGCCACCAGCCTTCTCT +
Preference number: 6 (lower is better)
Translates to: MYSTLHRAQLSQ*DPVSSKPPAFS
Trigger: AGAGAAGGCTGGTGGCTTGGAAGACACTGGATCTCACTGGCTCAGCTGGGCACGGTGCAAGGTGCTATACAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408988.2
CDS CAA 72 bp CATGAATTCTGGGCAGGTCCAGCCTCACTGATTGCCTaGAACAGAAATAGCAGCTCCCTGCTTCCCCAGCAG +
Preference number: 6 (lower is better)
Translates to: HEFWAGPASLIA*NRNSSSLLPQQ
Trigger: CTGCTGGGGAAGCAGGGAGCTGCTATTTCTGTTCAAGGCAATCAGTGAGGCTGGACCTGCCCAGAATTCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408988.2
CDS CAA 72 bp AACCTAGCCTGTGGGCAAGATGAGTGTCCTGTCCTGTaGTCTGGCGACTCTGGTGACTCTCCAGTATCAGAC +
Preference number: 6 (lower is better)
Translates to: NLACGQDECPVL*SGDSGDSPVSD
Trigger: GTCTGATACTGGAGAGTCACCAGAGTCGCCAGACAACAGGACAGGACACTCATCTTGCCCACAGGCTAGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408988.2
CDS CAA 90 bp GTGATTCCACATGAATTCTGGGCAGGTCCAGCCTCACTGATTGCCTaGAACAGAAATAGCAGCTCCCTGCTTCCCCAGCAGGCTCTGAAC +
Preference number: 6 (lower is better)
Translates to: VIPHEFWAGPASLIA*NRNSSSLLPQQALN
Trigger: GTTCAGAGCCTGCTGGGGAAGCAGGGAGCTGCTATTTCTGTTCAAGGCAATCAGTGAGGCTGGACCTGCCCAGAATTCATGTGGAATCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408988.2
CDS TCA 72 bp AACCATTTATGTATAGCACCTTGCACCGTGCCCAGCTaGGCCAGTGAGATCCAGTGTCTTCCAAGCCACCAG +
Preference number: 6 (lower is better)
Translates to: NHLCIAPCTVPS*ASEIQCLPSHQ
Trigger: CTGGTGGCTTGGAAGACACTGGATCTCACTGGCTCAGCTGGGCACGGTGCAAGGTGCTATACATAAATGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408988.2
CDS CAA 90 bp CATCCAGCAAACCTAGCCTGTGGGCAAGATGAGTGTCCTGTCCTGTaGTCTGGCGACTCTGGTGACTCTCCAGTATCAGACGAAAGAAAT +
Preference number: 6 (lower is better)
Translates to: HPANLACGQDECPVL*SGDSGDSPVSDERN
Trigger: ATTTCTTTCGTCTGATACTGGAGAGTCACCAGAGTCGCCAGACAACAGGACAGGACACTCATCTTGCCCACAGGCTAGGTTTGCTGGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408988.2
CDS CCA 72 bp TTCCAAACAGGCAAATGGAATAACTCTGACAAGAGTTaGTGTCTGGCAAACCTAGTGACATCCAGCAAACCT +
Preference number: 6 (lower is better)
Translates to: FQTGKWNNSDKS*CLANLVTSSKP
Trigger: AGGTTTGCTGGATGTCACTAGGTTTGCCAGACACCAACTCTTGTCAGAGTTATTCCATTTGCCTGTTTGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408988.2
CDS TCA 72 bp AGAAATATCTCCCTTCTGAGACAATGTACACCTGCCTaGACTGGCCTGAAACAAGAGGTGGTAAAATTTCTC +
Preference number: 6 (lower is better)
Translates to: RNISLLRQCTPA*TGLKQEVVKFL
Trigger: GAGAAATTTTACCACCTCTTGTTTCAGGCCAGTTCAGGCAGGTGTACATTGTCTCAGAAGGGAGATATTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408988.2
CDS GCA 72 bp CGAAAGAAATATCTCCCTTCTGAGACAATGTACACCTaGCTGAACTGGCCTGAAACAAGAGGTGGTAAAATT +
Preference number: 6 (lower is better)
Translates to: RKKYLPSETMYT*LNWPETRGGKI
Trigger: AATTTTACCACCTCTTGTTTCAGGCCAGTTCAGGCAGGTGTACATTGTCTCAGAAGGGAGATATTTCTTTCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408988.2