Pregenerated sensors for C6ORF62 (Homo sapiens)
Ensembl gene IDs: ENSG00000112308Ensembl transcript IDs: ENST00000378102.3, ENST00000378119.9
Found 65 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | GATGCAGTGCAGCAAATATGCAAAGCATCTTCTTTCACACAGTCCGTGCACGACTGCTGCTGCATTCTCTaGTCTTCTCCATTTTGCTGG | + |
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Preference number: 2 (lower is better) Translates to: DAVQQICKASSFTQSVHDCCCIL*SSPFCW Trigger: CCAGCAAAATGGAGAAGATCAGAGAATGCAGCAGCA...GTCGTGCACGGACTGTGTGAAAGAAGATGCTTTGCATATTTGCTGCACTGCATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378119.9 |
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| 3UTR-3UTR GCA 90 bp | TCTCACCCTCTAAATACTGATGACAGATGTCAAAGAGGCAAAAACCAGCACAAACTTTCACACAGTCCGTaGACGACATCTAATTTTTGT | + |
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Preference number: 2 (lower is better) Translates to: SHPLNTDDRCQRGKNQHKLSHSP*TTSNFC Trigger: ACAAAAATTAGATGTCGTGCACGGACTGTGTGAAAG...TTTGTGCTGGTTTTTGCCTCTTTGACATCTGTCATCAGTATTTAGAGGGTGAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000378119.9 |
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| 3UTR-3UTR TCA 90 bp | AGTCCTCTACCTATCATGGTTTCTGCAGCTATGCATGTATTTCTGTTTTATAGCTCATTAGAATGTATCTaGCAGTGCTCTGGAACAACT | + |
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Preference number: 2 (lower is better) Translates to: SPLPIMVSAAMHVFLFYSSLECI*QCSGTT Trigger: AGTTGTTCCAGAGCACTGTCAGATACATTCTAATGA...GCTATAAAACAGAAATACATGCATAGCTGCAGAAACCATGATAGGTAGAGGACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378119.9 |
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| 3UTR-3UTR GCA 90 bp | TCTCACCCTCTAAATACTGATGACAGATGTCAAAGAGGCAAAAACCAGCACAAAAAGATACTGATGCAGTaGAGCAAATATGCAAAGCAT | + |
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Preference number: 2 (lower is better) Translates to: SHPLNTDDRCQRGKNQHKKILMQ*SKYAKH Trigger: ATGCTTTGCATATTTGCTGCACTGCATCAGTATCTT...TTTGTGCTGGTTTTTGCCTCTTTGACATCTGTCATCAGTATTTAGAGGGTGAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000378119.9 |
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| 3UTR-3UTR GCA 90 bp | AGTCCTCTACCTATCATGGTTTCTGCAGCTATGCATGTATTTCTGTTTTATAGCTTTAATGTGTATAACTaGATCCACACGCAGCAGAAT | + |
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Preference number: 2 (lower is better) Translates to: SPLPIMVSAAMHVFLFYSFNVYN*IHTQQN Trigger: ATTCTGCTGCGTGTGGATGCAGTTATACACATTAAA...GCTATAAAACAGAAATACATGCATAGCTGCAGAAACCATGATAGGTAGAGGACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378119.9 |
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| 3UTR-3UTR CCA 90 bp | AGTCCTCTACCTATCATGGTTTCTGCAGCTATGCATGTATTTCTGTTTTATAGCCTTACAATAGCAACTTaGGGAAAGAGATCTGGAAAA | + |
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Preference number: 2 (lower is better) Translates to: SPLPIMVSAAMHVFLFYSLTIAT*GKRSGK Trigger: TTTTCCAGATCTCTTTCCCCAAGTTGCTATTGTAAG...GCTATAAAACAGAAATACATGCATAGCTGCAGAAACCATGATAGGTAGAGGACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378119.9 |
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| 3UTR CCA 72 bp | CCAGTTCTGGTCATTAGAATGTATCTGACAGTGCTCTaGAACAACTGTGATTATAGCAAAGTTATTGTTTTT | + |
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Preference number: 3 (lower is better) Translates to: PVLVIRMYLTVL*NNCDYSKVIVF Trigger: AAAAACAATAACTTTGCTATAATCACAGTTGTTCCAGAGCACTGTCAGATACATTCTAATGACCAGAACTGG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378119.9 |
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| CDS-3UTR TCA 90 bp | GATGCAGTGCAGCAAATATGCAAAGCATCTTCTTTCACACAGTCCGTGCACGACTCCCTTCTCATAGACTaGTATCGAGGAGCATGGAGC | + |
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Preference number: 4 (lower is better) Translates to: DAVQQICKASSFTQSVHDSLLID*YRGAWS Trigger: GCTCCATGCTCCTCGATATCAGTCTATGAGAAGGGA...GTCGTGCACGGACTGTGTGAAAGAAGATGCTTTGCATATTTGCTGCACTGCATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378119.9 |
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| CDS-3UTR TCA 90 bp | TGCTTTAATGTGTATAACTGCATCCACACGCAGCAGAATACTCTTACAATAGCACAACTGCCCAGTGGGTaGGCTGTTCCTGTGGCAGGT | + |
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Preference number: 4 (lower is better) Translates to: CFNVYNCIHTQQNTLTIAQLPSG*AVPVAG Trigger: ACCTGCCACAGGAACAGCTCACCCACTGGGCAGTTG...TGCTATTGTAAGAGTATTCTGCTGCGTGTGGATGCAGTTATACACATTAAAGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378119.9 |
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| CDS-3UTR CCA 90 bp | AGTCCTCTACCTATCATGGTTTCTGCAGCTATGCATGTATTTCTGTTTTATAGCGTGCCAACTGCCCAGTaGGTGAGCTGTTCCTGTGGC | + |
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Preference number: 4 (lower is better) Translates to: SPLPIMVSAAMHVFLFYSVPTAQ*VSCSCG Trigger: GCCACAGGAACAGCTCACCCACTGGGCAGTTGGCAC...GCTATAAAACAGAAATACATGCATAGCTGCAGAAACCATGATAGGTAGAGGACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378119.9 |
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| CDS-3UTR CCA 90 bp | GATGCAGTGCAGCAAATATGCAAAGCATCTTCTTTCACACAGTCCGTGCACGACGTCAGTACTCTACTCTaGCATATAAGGACGGAGGTG | + |
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Preference number: 4 (lower is better) Translates to: DAVQQICKASSFTQSVHDVSTLL*HIRTEV Trigger: CACCTCCGTCCTTATATGCCAGAGTAGAGTACTGAC...GTCGTGCACGGACTGTGTGAAAGAAGATGCTTTGCATATTTGCTGCACTGCATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378119.9 |
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| CDS-3UTR CCA 90 bp | TGCTTTAATGTGTATAACTGCATCCACACGCAGCAGAATACTCTTACAATAGCAGGAGGTGATCCTCTATaGTGCCAACTGCCCAGTGGG | + |
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Preference number: 4 (lower is better) Translates to: CFNVYNCIHTQQNTLTIAGGDPL*CQLPSG Trigger: CCCACTGGGCAGTTGGCACCATAGAGGATCACCTCC...TGCTATTGTAAGAGTATTCTGCTGCGTGTGGATGCAGTTATACACATTAAAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378119.9 |
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| CDS-3UTR TCA 90 bp | GATGCAGTGCAGCAAATATGCAAAGCATCTTCTTTCACACAGTCCGTGCACGACATGAAATCCATCTCCTaGGTACAGCCAATTACATCC | + |
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Preference number: 4 (lower is better) Translates to: DAVQQICKASSFTQSVHDMKSIS*VQPITS Trigger: GGATGTAATTGGCTGTACTCAGGAGATGGATTTCAT...GTCGTGCACGGACTGTGTGAAAGAAGATGCTTTGCATATTTGCTGCACTGCATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378119.9 |
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| CDS-3UTR TCA 90 bp | GATGCAGTGCAGCAAATATGCAAAGCATCTTCTTTCACACAGTCCGTGCACGACTTGGGTCCCCCATTTTaGAATACAGGTGGTACTAAA | + |
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Preference number: 4 (lower is better) Translates to: DAVQQICKASSFTQSVHDLGPPF*NTGGTK Trigger: TTTAGTACCACCTGTATTTCAAAATGGGGGACCCAA...GTCGTGCACGGACTGTGTGAAAGAAGATGCTTTGCATATTTGCTGCACTGCATC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000378119.9 |
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| CDS-3UTR GCA 90 bp | TGCTTTAATGTGTATAACTGCATCCACACGCAGCAGAATACTCTTACAATAGCACTCTATGGTGCCAACTaGCCAGTGGGTGAGCTGTTC | + |
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Preference number: 4 (lower is better) Translates to: CFNVYNCIHTQQNTLTIALYGAN*PVGELF Trigger: GAACAGCTCACCCACTGGGCAGTTGGCACCATAGAG...TGCTATTGTAAGAGTATTCTGCTGCGTGTGGATGCAGTTATACACATTAAAGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378119.9 |
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| CDS-3UTR CCA 90 bp | TGCAGTGCAGCAAATATGCAAAGCATCTTCTTTCACACAGTCCGTGCACGACATTCTTCTCCATTTTGCTaGTCAGTACTCTACTCTGGC | + |
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Preference number: 4 (lower is better) Translates to: CSAANMQSIFFHTVRARHSSPFC*SVLYSG Trigger: GCCAGAGTAGAGTACTGACCAGCAAAATGGAGAAGA...ATGTCGTGCACGGACTGTGTGAAAGAAGATGCTTTGCATATTTGCTGCACTGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378119.9 |
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| CDS-3UTR CCA 90 bp | TGCAGTGCAGCAAATATGCAAAGCATCTTCTTTCACACAGTCCGTGCACGACATGTCCTCTACCTATCATaGTTTCTGCAGCTATGCATG | + |
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Preference number: 4 (lower is better) Translates to: CSAANMQSIFFHTVRARHVLYLS*FLQLCM Trigger: CATGCATAGCTGCAGAAACCATGATAGGTAGAGGAC...ATGTCGTGCACGGACTGTGTGAAAGAAGATGCTTTGCATATTTGCTGCACTGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378119.9 |
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| CDS-3UTR TCA 90 bp | TGCAGTGCAGCAAATATGCAAAGCATCTTCTTTCACACAGTCCGTGCACGACATGGCTTTGCGGAGAAATaGAAAGCCTATAATCAGGAT | + |
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Preference number: 4 (lower is better) Translates to: CSAANMQSIFFHTVRARHGFAEK*KAYNQD Trigger: ATCCTGATTATAGGCTTTTCATTTCTCCGCAAAGCC...ATGTCGTGCACGGACTGTGTGAAAGAAGATGCTTTGCATATTTGCTGCACTGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378119.9 |
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| CDS-3UTR TCA 90 bp | GATGCAGTGCAGCAAATATGCAAAGCATCTTCTTTCACACAGTCCGTGCACGACAGGCAATATACATCTTaGAGTCAAACTGGTCAGCTA | + |
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Preference number: 4 (lower is better) Translates to: DAVQQICKASSFTQSVHDRQYTS*SQTGQL Trigger: TAGCTGACCAGTTTGACTTCAAGATGTATATTGCCT...GTCGTGCACGGACTGTGTGAAAGAAGATGCTTTGCATATTTGCTGCACTGCATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378119.9 |
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| CDS-3UTR TCA 90 bp | GATGCAGTGCAGCAAATATGCAAAGCATCTTCTTTCACACAGTCCGTGCACGACTCATTAGAATGTATCTaGCAGTGCTCTGGAACAACT | + |
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Preference number: 4 (lower is better) Translates to: DAVQQICKASSFTQSVHDSLECI*QCSGTT Trigger: AGTTGTTCCAGAGCACTGTCAGATACATTCTAATGA...GTCGTGCACGGACTGTGTGAAAGAAGATGCTTTGCATATTTGCTGCACTGCATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378119.9 |
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| CDS-3UTR CCA 90 bp | GATGCAGTGCAGCAAATATGCAAAGCATCTTCTTTCACACAGTCCGTGCACGACAAGAGAAACACTGACTaGTTAGGATTGTTGACAACG | + |
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Preference number: 4 (lower is better) Translates to: DAVQQICKASSFTQSVHDKRNTD*LGLLTT Trigger: CGTTGTCAACAATCCTAACCAGTCAGTGTTTCTCTT...GTCGTGCACGGACTGTGTGAAAGAAGATGCTTTGCATATTTGCTGCACTGCATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378119.9 |
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| CDS-3UTR TCA 90 bp | TGCAGTGCAGCAAATATGCAAAGCATCTTCTTTCACACAGTCCGTGCACGACATTTTTTCTTTCTAAGCTaGGCACGTAGTCTGTTCAGA | + |
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Preference number: 4 (lower is better) Translates to: CSAANMQSIFFHTVRARHFFFLS*ARSLFR Trigger: TCTGAACAGACTACGTGCTCAGCTTAGAAAGAAAAA...ATGTCGTGCACGGACTGTGTGAAAGAAGATGCTTTGCATATTTGCTGCACTGCA 43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENST00000378119.9 |
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| CDS-3UTR GCA 90 bp | TCTCACCCTCTAAATACTGATGACAGATGTCAAAGAGGCAAAAACCAGCACAAATTCCAGTCTTGTCCTTaGGGCTCAGTACATGCAGAA | + |
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Preference number: 4 (lower is better) Translates to: SHPLNTDDRCQRGKNQHKFQSCP*GSVHAE Trigger: TTCTGCATGTACTGAGCCGCAAGGACAAGACTGGAA...TTTGTGCTGGTTTTTGCCTCTTTGACATCTGTCATCAGTATTTAGAGGGTGAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000378119.9 |
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| CDS-3UTR GCA 90 bp | TGCAGTGCAGCAAATATGCAAAGCATCTTCTTTCACACAGTCCGTGCACGACATCACATTTGGCTTAACTaGCAAAATAAAGGCTTTGCG | + |
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Preference number: 4 (lower is better) Translates to: CSAANMQSIFFHTVRARHHIWLN*QNKGFA Trigger: CGCAAAGCCTTTATTTTGGCAGTTAAGCCAAATGTG...ATGTCGTGCACGGACTGTGTGAAAGAAGATGCTTTGCATATTTGCTGCACTGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378119.9 |
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| CDS-3UTR TCA 90 bp | TGCTTTAATGTGTATAACTGCATCCACACGCAGCAGAATACTCTTACAATAGCATCCGAGGCCAAAGAATaGAATCCATCTCCTGAGTAC | + |
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Preference number: 4 (lower is better) Translates to: CFNVYNCIHTQQNTLTIASEAKE*NPSPEY Trigger: GTACTCAGGAGATGGATTTCATTCTTTGGCCTCGGA...TGCTATTGTAAGAGTATTCTGCTGCGTGTGGATGCAGTTATACACATTAAAGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378119.9 |
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| CDS-3UTR TCA 90 bp | TGCTTTAATGTGTATAACTGCATCCACACGCAGCAGAATACTCTTACAATAGCAAACTCAAATTTGGCCTaGACAGGCCTAAAAGGCTCA | + |
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Preference number: 4 (lower is better) Translates to: CFNVYNCIHTQQNTLTIANSNLA*TGLKGS Trigger: TGAGCCTTTTAGGCCTGTTCAGGCCAAATTTGAGTT...TGCTATTGTAAGAGTATTCTGCTGCGTGTGGATGCAGTTATACACATTAAAGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378119.9 |
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| CDS-3UTR TCA 90 bp | AGTCCTCTACCTATCATGGTTTCTGCAGCTATGCATGTATTTCTGTTTTATAGCAGTGCTGTCTGTCAATaGAGAGAAACACTGACTGGT | + |
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Preference number: 4 (lower is better) Translates to: SPLPIMVSAAMHVFLFYSSAVCQ*RETLTG Trigger: ACCAGTCAGTGTTTCTCTTCATTGACAGACAGCACT...GCTATAAAACAGAAATACATGCATAGCTGCAGAAACCATGATAGGTAGAGGACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378119.9 |
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| CDS-3UTR CCA 90 bp | TCTCACCCTCTAAATACTGATGACAGATGTCAAAGAGGCAAAAACCAGCACAAATTTCCAAGGAATAGCTaGAATCTCGCACACCTTTCA | + |
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Preference number: 4 (lower is better) Translates to: SHPLNTDDRCQRGKNQHKFPRNS*NLAHLS Trigger: TGAAAGGTGTGCGAGATTCCAGCTATTCCTTGGAAA...TTTGTGCTGGTTTTTGCCTCTTTGACATCTGTCATCAGTATTTAGAGGGTGAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000378119.9 |
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| CDS-3UTR CCA 90 bp | TGCTTTAATGTGTATAACTGCATCCACACGCAGCAGAATACTCTTACAATAGCATTGGACAATAACGTTTaGGGTCAGACGGGAAAAAGG | + |
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Preference number: 4 (lower is better) Translates to: CFNVYNCIHTQQNTLTIALDNNV*GQTGKR Trigger: CCTTTTTCCCGTCTGACCCCAAACGTTATTGTCCAA...TGCTATTGTAAGAGTATTCTGCTGCGTGTGGATGCAGTTATACACATTAAAGCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000378119.9 |
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| CDS-3UTR CCA 90 bp | TGCTTTAATGTGTATAACTGCATCCACACGCAGCAGAATACTCTTACAATAGCACTGTCCAGTCATGTTTaGACAATAACGTTTGGGGTC | + |
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Preference number: 4 (lower is better) Translates to: CFNVYNCIHTQQNTLTIALSSHV*TITFGV Trigger: GACCCCAAACGTTATTGTCCAAACATGACTGGACAG...TGCTATTGTAAGAGTATTCTGCTGCGTGTGGATGCAGTTATACACATTAAAGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378119.9 |
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| CDS-3UTR CCA 90 bp | TCTCACCCTCTAAATACTGATGACAGATGTCAAAGAGGCAAAAACCAGCACAAATTTCTTCCGGGAGTTTaGGTCCCCCATTTTGAAATA | + |
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Preference number: 4 (lower is better) Translates to: SHPLNTDDRCQRGKNQHKFLPGV*VPHFEI Trigger: TATTTCAAAATGGGGGACCCAAACTCCCGGAAGAAA...TTTGTGCTGGTTTTTGCCTCTTTGACATCTGTCATCAGTATTTAGAGGGTGAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000378119.9 |
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| CDS-3UTR GCA 90 bp | TCTCACCCTCTAAATACTGATGACAGATGTCAAAGAGGCAAAAACCAGCACAAATCAAGAAACAAAAGCTaGTGTCCAGTCATGTTTGGA | + |
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Preference number: 4 (lower is better) Translates to: SHPLNTDDRCQRGKNQHKSRNKS*CPVMFG Trigger: TCCAAACATGACTGGACAGCAGCTTTTGTTTCTTGA...TTTGTGCTGGTTTTTGCCTCTTTGACATCTGTCATCAGTATTTAGAGGGTGAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000378119.9 |
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| CDS-3UTR GCA 90 bp | AGTCCTCTACCTATCATGGTTTCTGCAGCTATGCATGTATTTCTGTTTTATAGCCTTTCACACAGTCCGTaGACGACATCTAATTTTTGT | + |
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Preference number: 4 (lower is better) Translates to: SPLPIMVSAAMHVFLFYSLSHSP*TTSNFC Trigger: ACAAAAATTAGATGTCGTGCACGGACTGTGTGAAAG...GCTATAAAACAGAAATACATGCATAGCTGCAGAAACCATGATAGGTAGAGGACT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000378119.9 |
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| CDS-3UTR CCA 90 bp | TGCTTTAATGTGTATAACTGCATCCACACGCAGCAGAATACTCTTACAATAGCATATCTGACAGTGCTCTaGAACAACTGTGATTATAGC | + |
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Preference number: 4 (lower is better) Translates to: CFNVYNCIHTQQNTLTIAYLTVL*NNCDYS Trigger: GCTATAATCACAGTTGTTCCAGAGCACTGTCAGATA...TGCTATTGTAAGAGTATTCTGCTGCGTGTGGATGCAGTTATACACATTAAAGCA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378119.9 |
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| CDS-3UTR GCA 90 bp | TCTCACCCTCTAAATACTGATGACAGATGTCAAAGAGGCAAAAACCAGCACAAAATGAGTATCACCTTGTaGTTTCAGATACATTTAAGC | + |
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Preference number: 4 (lower is better) Translates to: SHPLNTDDRCQRGKNQHKMSITL*FQIHLS Trigger: GCTTAAATGTATCTGAAAGCACAAGGTGATACTCAT...TTTGTGCTGGTTTTTGCCTCTTTGACATCTGTCATCAGTATTTAGAGGGTGAGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000378119.9 |
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| CDS-3UTR GCA 90 bp | TGCTTTAATGTGTATAACTGCATCCACACGCAGCAGAATACTCTTACAATAGCATTTAATGTGTATAACTaGATCCACACGCAGCAGAAT | + |
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Preference number: 4 (lower is better) Translates to: CFNVYNCIHTQQNTLTIAFNVYN*IHTQQN Trigger: ATTCTGCTGCGTGTGGATGCAGTTATACACATTAAA...TGCTATTGTAAGAGTATTCTGCTGCGTGTGGATGCAGTTATACACATTAAAGCA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378119.9 |
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| CDS-3UTR GCA 90 bp | TGCTTTAATGTGTATAACTGCATCCACACGCAGCAGAATACTCTTACAATAGCATTCAGACTCCAGATCTaGTTTAATGTGTATAACTGC | + |
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Preference number: 4 (lower is better) Translates to: CFNVYNCIHTQQNTLTIAFRLQI*FNVYNC Trigger: GCAGTTATACACATTAAAGCAGATCTGGAGTCTGAA...TGCTATTGTAAGAGTATTCTGCTGCGTGTGGATGCAGTTATACACATTAAAGCA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378119.9 |
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| CDS-3UTR GCA 90 bp | AGTCCTCTACCTATCATGGTTTCTGCAGCTATGCATGTATTTCTGTTTTATAGCACCTATCATGGTTTCTaGAGCTATGCATGTATTTCT | + |
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Preference number: 4 (lower is better) Translates to: SPLPIMVSAAMHVFLFYSTYHGF*SYACIS Trigger: AGAAATACATGCATAGCTGCAGAAACCATGATAGGT...GCTATAAAACAGAAATACATGCATAGCTGCAGAAACCATGATAGGTAGAGGACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378119.9 |
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| CDS-3UTR CCA 90 bp | TCTCACCCTCTAAATACTGATGACAGATGTCAAAGAGGCAAAAACCAGCACAAAATTATTTGTCATGACTaGTATAACCTCAGACACTTC | + |
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Preference number: 4 (lower is better) Translates to: SHPLNTDDRCQRGKNQHKIICHD*YNLRHF Trigger: GAAGTGTCTGAGGTTATACCAGTCATGACAAATAAT...TTTGTGCTGGTTTTTGCCTCTTTGACATCTGTCATCAGTATTTAGAGGGTGAGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000378119.9 |
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| CDS-3UTR CCA 90 bp | TGCTTTAATGTGTATAACTGCATCCACACGCAGCAGAATACTCTTACAATAGCACTTACAATAGCAACTTaGGGAAAGAGATCTGGAAAA | + |
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Preference number: 4 (lower is better) Translates to: CFNVYNCIHTQQNTLTIALTIAT*GKRSGK Trigger: TTTTCCAGATCTCTTTCCCCAAGTTGCTATTGTAAG...TGCTATTGTAAGAGTATTCTGCTGCGTGTGGATGCAGTTATACACATTAAAGCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378119.9 |
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| CDS-3UTR CCA 90 bp | TGCTTTAATGTGTATAACTGCATCCACACGCAGCAGAATACTCTTACAATAGCAATCTTGAAGTCAAACTaGTCAGCTAGAGATTCTTTT | + |
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Preference number: 4 (lower is better) Translates to: CFNVYNCIHTQQNTLTIAILKSN*SARDSF Trigger: AAAAGAATCTCTAGCTGACCAGTTTGACTTCAAGAT...TGCTATTGTAAGAGTATTCTGCTGCGTGTGGATGCAGTTATACACATTAAAGCA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378119.9 |
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| CDS GCA 90 bp | CTACTCTGGCATATAAGGACGGAGGTGATCCTCTATGGTGCCAACTaGCCAGTGGGTGAGCTGTTCCTGTGGCAGGTAGAGGCAGATGCT | + |
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Preference number: 5 (lower is better) Translates to: LLWHIRTEVILYGAN*PVGELFLWQVEADA Trigger: AGCATCTGCCTCTACCTGCCACAGGAACAGCTCACCCACTGGGCAGTTGGCACCATAGAGGATCACCTCCGTCCTTATATGCCAGAGTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000378102.3 ENST00000378119.9 |
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| CDS CCA 90 bp | ACCACGGGAGACACAGGATCACTCAGGTTTTCACTCATTTCATCGTaGAAACAATTCCCGCCCGGGTGGAGTGGGCGGGAGAGGGTAAAT | + |
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Preference number: 5 (lower is better) Translates to: TTGDTGSLRFSLISS*KQFPPGWSGRERVN Trigger: ATTTACCCTCTCCCGCCCACTCCACCCGGGCGGGAATTGTTTCCACGATGAAATGAGTGAAAACCTGAGTGATCCTGTGTCTCCCGTGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378102.3 |
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| CDS CCA 90 bp | CTGCATTCTCTGATCTTCTCCATTTTGCTGGTCAGTACTCTACTCTaGCATATAAGGACGGAGGTGATCCTCTATGGTGCCAACTGCCCA | + |
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Preference number: 5 (lower is better) Translates to: LHSLIFSILLVSTLL*HIRTEVILYGANCP Trigger: TGGGCAGTTGGCACCATAGAGGATCACCTCCGTCCTTATATGCCAGAGTAGAGTACTGACCAGCAAAATGGAGAAGATCAGAGAATGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000378102.3 ENST00000378119.9 |
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| CDS-3UTR CAA 90 bp | GATGCAGTGCAGCAAATATGCAAAGCATCTTCTTTCACACAGTCCGTGCACGACGCTGTCCAGTCATGTTaGGACAATAACGTTTGGGGT | + |
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Preference number: 5 (lower is better) Translates to: DAVQQICKASSFTQSVHDAVQSC*DNNVWG Trigger: ACCCCAAACGTTATTGTCCAAACATGACTGGACAGC...GTCGTGCACGGACTGTGTGAAAGAAGATGCTTTGCATATTTGCTGCACTGCATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378119.9 |
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| CDS CCA 90 bp | TTTGGAGTCTGCAAGTGCTGTCTGTCAATGAAGAGAAACACTGACTaGTTAGGATTGTTGACAACGATTCCAGTCTTGTCCTTGCGGCTC | + |
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Preference number: 5 (lower is better) Translates to: FGVCKCCLSMKRNTD*LGLLTTIPVLSLRL Trigger: GAGCCGCAAGGACAAGACTGGAATCGTTGTCAACAATCCTAACCAGTCAGTGTTTCTCTTCATTGACAGACAGCACTTGCAGACTCCAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000378102.3 ENST00000378119.9 |
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| CDS-3UTR CAA 90 bp | TCTCACCCTCTAAATACTGATGACAGATGTCAAAGAGGCAAAAACCAGCACAAAACAACGATTCCAGTCTaGTCCTTGCGGCTCAGTACA | + |
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Preference number: 5 (lower is better) Translates to: SHPLNTDDRCQRGKNQHKTTIPV*SLRLST Trigger: TGTACTGAGCCGCAAGGACAAGACTGGAATCGTTGT...TTTGTGCTGGTTTTTGCCTCTTTGACATCTGTCATCAGTATTTAGAGGGTGAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000378119.9 |
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| CDS-3UTR CAA 90 bp | TGCAGTGCAGCAAATATGCAAAGCATCTTCTTTCACACAGTCCGTGCACGACATGCCAAAATAAAGGCTTaGCGGAGAAATGAAAAGCCT | + |
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Preference number: 5 (lower is better) Translates to: CSAANMQSIFFHTVRARHAKIKA*RRNEKP Trigger: AGGCTTTTCATTTCTCCGCAAAGCCTTTATTTTGGC...ATGTCGTGCACGGACTGTGTGAAAGAAGATGCTTTGCATATTTGCTGCACTGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378119.9 |
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| CDS-3UTR CAA 90 bp | AGTCCTCTACCTATCATGGTTTCTGCAGCTATGCATGTATTTCTGTTTTATAGCATTCCAGTCTTGTCCTaGCGGCTCAGTACATGCAGA | + |
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Preference number: 5 (lower is better) Translates to: SPLPIMVSAAMHVFLFYSIPVLS*RLSTCR Trigger: TCTGCATGTACTGAGCCGCAAGGACAAGACTGGAAT...GCTATAAAACAGAAATACATGCATAGCTGCAGAAACCATGATAGGTAGAGGACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378119.9 |
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| CDS-3UTR CAA 90 bp | TGCAGTGCAGCAAATATGCAAAGCATCTTCTTTCACACAGTCCGTGCACGACATAAGGCAATATACATCTaGAAGTCAAACTGGTCAGCT | + |
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Preference number: 5 (lower is better) Translates to: CSAANMQSIFFHTVRARHKAIYI*KSNWSA Trigger: AGCTGACCAGTTTGACTTCAAGATGTATATTGCCTT...ATGTCGTGCACGGACTGTGTGAAAGAAGATGCTTTGCATATTTGCTGCACTGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378119.9 |
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| CDS-3UTR CAA 90 bp | TGCAGTGCAGCAAATATGCAAAGCATCTTCTTTCACACAGTCCGTGCACGACATCAGATGCTGCATAACTaGAAGATTGTAGCTTTGTTT | + |
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Preference number: 5 (lower is better) Translates to: CSAANMQSIFFHTVRARHQMLHN*KIVALF Trigger: AAACAAAGCTACAATCTTCAAGTTATGCAGCATCTG...ATGTCGTGCACGGACTGTGTGAAAGAAGATGCTTTGCATATTTGCTGCACTGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378119.9 |
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| CDS-3UTR CAA 90 bp | TGCTTTAATGTGTATAACTGCATCCACACGCAGCAGAATACTCTTACAATAGCAGACTGGTTAGGATTGTaGACAACGATTCCAGTCTTG | + |
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Preference number: 5 (lower is better) Translates to: CFNVYNCIHTQQNTLTIADWLGL*TTIPVL Trigger: CAAGACTGGAATCGTTGTCAACAATCCTAACCAGTC...TGCTATTGTAAGAGTATTCTGCTGCGTGTGGATGCAGTTATACACATTAAAGCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378119.9 |
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| CDS-3UTR CAA 90 bp | TGCTTTAATGTGTATAACTGCATCCACACGCAGCAGAATACTCTTACAATAGCAACTGACTGGTTAGGATaGTTGACAACGATTCCAGTC | + |
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Preference number: 5 (lower is better) Translates to: CFNVYNCIHTQQNTLTIATDWLG*LTTIPV Trigger: GACTGGAATCGTTGTCAACAATCCTAACCAGTCAGT...TGCTATTGTAAGAGTATTCTGCTGCGTGTGGATGCAGTTATACACATTAAAGCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378119.9 |
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| CDS-3UTR CAA 90 bp | TGCTTTAATGTGTATAACTGCATCCACACGCAGCAGAATACTCTTACAATAGCACTGATCTTCTCCATTTaGCTGGTCAGTACTCTACTC | + |
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Preference number: 5 (lower is better) Translates to: CFNVYNCIHTQQNTLTIALIFSI*LVSTLL Trigger: GAGTAGAGTACTGACCAGCAAAATGGAGAAGATCAG...TGCTATTGTAAGAGTATTCTGCTGCGTGTGGATGCAGTTATACACATTAAAGCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378119.9 |
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| CDS CCA 90 bp | CCACATCCTTCTGTAAAAGCTCTAGGGAACTTTCCAAGGAATAGCTaGAATCTCGCACACCTTTCAGGATATTTTCTTCATAATTATTTG | + |
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Preference number: 5 (lower is better) Translates to: PHPSVKALGNFPRNS*NLAHLSGYFLHNYL Trigger: CAAATAATTATGAAGAAAATATCCTGAAAGGTGTGCGAGATTCCAGCTATTCCTTGGAAAGTTCCCTAGAGCTTTTACAGAAGGATGTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000378102.3 ENST00000378119.9 |
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| CDS GCA 72 bp | CATATAAGGACGGAGGTGATCCTCTATGGTGCCAACTaGCCAGTGGGTGAGCTGTTCCTGTGGCAGGTAGAG | + |
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Preference number: 6 (lower is better) Translates to: HIRTEVILYGAN*PVGELFLWQVE Trigger: CTCTACCTGCCACAGGAACAGCTCACCCACTGGGCAGTTGGCACCATAGAGGATCACCTCCGTCCTTATATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000378102.3 ENST00000378119.9 |
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| CDS CCA 72 bp | GACACAGGATCACTCAGGTTTTCACTCATTTCATCGTaGAAACAATTCCCGCCCGGGTGGAGTGGGCGGGAG | + |
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Preference number: 6 (lower is better) Translates to: DTGSLRFSLISS*KQFPPGWSGRE Trigger: CTCCCGCCCACTCCACCCGGGCGGGAATTGTTTCCACGATGAAATGAGTGAAAACCTGAGTGATCCTGTGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378102.3 |
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| CDS CCA 72 bp | CTGATCTTCTCCATTTTGCTGGTCAGTACTCTACTCTaGCATATAAGGACGGAGGTGATCCTCTATGGTGCC | + |
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Preference number: 6 (lower is better) Translates to: LIFSILLVSTLL*HIRTEVILYGA Trigger: GGCACCATAGAGGATCACCTCCGTCCTTATATGCCAGAGTAGAGTACTGACCAGCAAAATGGAGAAGATCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000378102.3 ENST00000378119.9 |
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| CDS CAA 90 bp | TGCAAGTGCTGTCTGTCAATGAAGAGAAACACTGACTGGTTAGGATaGTTGACAACGATTCCAGTCTTGTCCTTGCGGCTCAGTACATGC | + |
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Preference number: 6 (lower is better) Translates to: CKCCLSMKRNTDWLG*LTTIPVLSLRLSTC Trigger: GCATGTACTGAGCCGCAAGGACAAGACTGGAATCGTTGTCAACAATCCTAACCAGTCAGTGTTTCTCTTCATTGACAGACAGCACTTGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000378102.3 ENST00000378119.9 |
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| CDS CAA 90 bp | AAGTGCTGTCTGTCAATGAAGAGAAACACTGACTGGTTAGGATTGTaGACAACGATTCCAGTCTTGTCCTTGCGGCTCAGTACATGCAGA | + |
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Preference number: 6 (lower is better) Translates to: KCCLSMKRNTDWLGL*TTIPVLSLRLSTCR Trigger: TCTGCATGTACTGAGCCGCAAGGACAAGACTGGAATCGTTGTCAACAATCCTAACCAGTCAGTGTTTCTCTTCATTGACAGACAGCACTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000378102.3 ENST00000378119.9 |
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| CDS TCA 72 bp | CATGACTGGTATAACCTCAGACACTTCAAAAAGTGCTaGCTTTTTCTTTCGCACCACGGGAGACACAGGATC | + |
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Preference number: 6 (lower is better) Translates to: HDWYNLRHFKKC*LFLSHHGRHRI Trigger: GATCCTGTGTCTCCCGTGGTGCGAAAGAAAAAGTCAGCACTTTTTGAAGTGTCTGAGGTTATACCAGTCATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000378102.3 |
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| CDS CAA 72 bp | CTGTCAATGAAGAGAAACACTGACTGGTTAGGATTGTaGACAACGATTCCAGTCTTGTCCTTGCGGCTCAGT | + |
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Preference number: 6 (lower is better) Translates to: LSMKRNTDWLGL*TTIPVLSLRLS Trigger: ACTGAGCCGCAAGGACAAGACTGGAATCGTTGTCAACAATCCTAACCAGTCAGTGTTTCTCTTCATTGACAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000378102.3 ENST00000378119.9 |
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| CDS CAA 72 bp | TGTCTGTCAATGAAGAGAAACACTGACTGGTTAGGATaGTTGACAACGATTCCAGTCTTGTCCTTGCGGCTC | + |
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Preference number: 6 (lower is better) Translates to: CLSMKRNTDWLG*LTTIPVLSLRL Trigger: GAGCCGCAAGGACAAGACTGGAATCGTTGTCAACAATCCTAACCAGTCAGTGTTTCTCTTCATTGACAGACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000378102.3 ENST00000378119.9 |
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| CDS TCA 72 bp | GAGCTTGTTTCTTCCGGGAGTTTGGGTCCCCCATTTTaGAATACAGGTGGTACTAAAGCCTTTGGAAATTGT | + |
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Preference number: 6 (lower is better) Translates to: ELVSSGSLGPPF*NTGGTKAFGNC Trigger: ACAATTTCCAAAGGCTTTAGTACCACCTGTATTTCAAAATGGGGGACCCAAACTCCCGGAAGAAACAAGCTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000378119.9 |
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| CDS CCA 72 bp | TCTGTAAAAGCTCTAGGGAACTTTCCAAGGAATAGCTaGAATCTCGCACACCTTTCAGGATATTTTCTTCAT | + |
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Preference number: 6 (lower is better) Translates to: SVKALGNFPRNS*NLAHLSGYFLH Trigger: ATGAAGAAAATATCCTGAAAGGTGTGCGAGATTCCAGCTATTCCTTGGAAAGTTCCCTAGAGCTTTTACAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000378102.3 ENST00000378119.9 |
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