Pregenerated sensors for C6ORF58 (Homo sapiens)

Ensembl gene IDs: ENSG00000184530

Ensembl transcript IDs: ENST00000329722.8, ENST00000498112.1

Found 11 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CCA 90 bp	GACCAGGACTCTCCTTCCACAGAGGGGGCTCTGTCTCTGAGAGATTaGAAGTCCCTGCTAAGGAAGCAGAAAAGGAACCAACTAGTACAC	+
Preference number: 5 (lower is better) Translates to: DQDSPSTEGALSLRD*KSLLRKQKRNQLVH Trigger: GTGTACTAGTTGGTTCCTTTTCTGCTTCCTTAGCAGGGACTTCCAATCTCTCAGAGACAGAGCCCCCTCTGTGGAAGGAGAGTCCTGGTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000329722.8
CDS GCA 90 bp	AACCGTTCTGTAAAGGATCTCTGTGGGCCGATATTTATTTCGGTTTaGACTAAATTAGTCGTGGCTTCGCAAGAACCCTTTGTCTGTGGG	+
Preference number: 5 (lower is better) Translates to: NRSVKDLCGPIFISV*TKLVVASQEPFVCG Trigger: CCCACAGACAAAGGGTTCTTGCGAAGCCACGACTAATTTAGTGCAAACCGAAATAAATATCGGCCCACAGAGATCCTTTACAGAACGGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000498112.1
CDS GCA 90 bp	AAGACAGAAAATAATTCAAATCAGCCCACCAACTGTCCACAGAGATaGACATATGATCTCCAGATTCATAGCCACAGTTTGTCCTTCGGG	+
Preference number: 5 (lower is better) Translates to: KTENNSNQPTNCPQR*TYDLQIHSHSLSFG Trigger: CCCGAAGGACAAACTGTGGCTATGAATCTGGAGATCATATGTGCATCTCTGTGGACAGTTGGTGGGCTGATTTGAATTATTTTCTGTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000329722.8
CDS TCA 90 bp	TTATCCACATTGTCAAGCATATTTAGAAGAACCAGGACTACATTCTaGAAAGCAGTAAAGTCACTGATGAAAGGGGCTACATCAGTATTA	+
Preference number: 5 (lower is better) Translates to: LSTLSSIFRRTRTTF*KAVKSLMKGATSVL Trigger: TAATACTGATGTAGCCCCTTTCATCAGTGACTTTACTGCTTTTCAGAATGTAGTCCTGGTTCTTCTAAATATGCTTGACAATGTGGATAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000329722.8
CDS CCA 90 bp	ATTTGTGTTCAGTACAGAGAAAATTGCGGTCTAGGAAGAAGAGTCTaGATGCGATGTAACAATGTAGACATGATTTTATTCTCATACTCA	+
Preference number: 5 (lower is better) Translates to: ICVQYRENCGLGRRV*MRCNNVDMILFSYS Trigger: TGAGTATGAGAATAAAATCATGTCTACATTGTTACATCGCATCCAGACTCTTCTTCCTAGACCGCAATTTTCTCTGTACTGAACACAAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000498112.1
CDS CAA 72 bp	CTCTCCTTCCACAGAGGGGGCTCTGTCTCTGAGAGATaGGAAGTCCCTGCTAAGGAAGCAGAAAAGGAACCA	+
Preference number: 6 (lower is better) Translates to: LSFHRGGSVSER*EVPAKEAEKEP Trigger: TGGTTCCTTTTCTGCTTCCTTAGCAGGGACTTCCAATCTCTCAGAGACAGAGCCCCCTCTGTGGAAGGAGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000329722.8
CDS CCA 72 bp	TCTCCTTCCACAGAGGGGGCTCTGTCTCTGAGAGATTaGAAGTCCCTGCTAAGGAAGCAGAAAAGGAACCAA	+
Preference number: 6 (lower is better) Translates to: SPSTEGALSLRD*KSLLRKQKRNQ Trigger: TTGGTTCCTTTTCTGCTTCCTTAGCAGGGACTTCCAATCTCTCAGAGACAGAGCCCCCTCTGTGGAAGGAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000329722.8
CDS GCA 72 bp	TCAGCTAATCTGCCTGTCCTATATTGCCAGCCATACTaGAGAGGCAACCCCCATAAAATATTCTGTTCATTA	+
Preference number: 6 (lower is better) Translates to: SANLPVLYCQPY*RGNPHKIFCSL Trigger: TAATGAACAGAATATTTTATGGGGGTTGCCTCTGCAGTATGGCTGGCAATATAGGACAGGCAGATTAGCTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000329722.8
CDS GCA 72 bp	GTAAAGGATCTCTGTGGGCCGATATTTATTTCGGTTTaGACTAAATTAGTCGTGGCTTCGCAAGAACCCTTT	+
Preference number: 6 (lower is better) Translates to: VKDLCGPIFISV*TKLVVASQEPF Trigger: AAAGGGTTCTTGCGAAGCCACGACTAATTTAGTGCAAACCGAAATAAATATCGGCCCACAGAGATCCTTTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000498112.1
CDS GCA 72 bp	AATAATTCAAATCAGCCCACCAACTGTCCACAGAGATaGACATATGATCTCCAGATTCATAGCCACAGTTTG	+
Preference number: 6 (lower is better) Translates to: NNSNQPTNCPQR*TYDLQIHSHSL Trigger: CAAACTGTGGCTATGAATCTGGAGATCATATGTGCATCTCTGTGGACAGTTGGTGGGCTGATTTGAATTATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000329722.8
CDS CCA 72 bp	CAGTACAGAGAAAATTGCGGTCTAGGAAGAAGAGTCTaGATGCGATGTAACAATGTAGACATGATTTTATTC	+
Preference number: 6 (lower is better) Translates to: QYRENCGLGRRV*MRCNNVDMILF Trigger: GAATAAAATCATGTCTACATTGTTACATCGCATCCAGACTCTTCTTCCTAGACCGCAATTTTCTCTGTACTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000498112.1

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